Query psy12131
Match_columns 245
No_of_seqs 177 out of 1886
Neff 11.8
Searched_HMMs 29240
Date Fri Aug 16 19:31:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12131.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12131hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jll_A NCAM2, neural cell adhe 100.0 1.1E-32 3.7E-37 213.4 32.4 231 2-243 52-291 (389)
2 2nzi_A Titin; IG-domain, FNIII 100.0 6.5E-32 2.2E-36 202.5 28.1 222 11-244 62-295 (305)
3 3b43_A Titin; I-SET IG fold, e 100.0 6.3E-29 2.2E-33 201.2 24.2 220 7-238 343-568 (570)
4 2rik_A Titin; I-SET IG fold, p 100.0 6.1E-28 2.1E-32 179.1 25.4 223 5-239 55-283 (284)
5 3b43_A Titin; I-SET IG fold, e 100.0 1.5E-27 5E-32 193.2 22.7 223 5-240 247-476 (570)
6 3mtr_A N-CAM-1, NCAM-1, neural 100.0 1.8E-26 6E-31 164.5 21.0 188 48-243 18-212 (215)
7 2wim_A N-CAM 2, NCAM2, neural 99.9 2.2E-26 7.4E-31 171.3 19.1 226 2-242 49-286 (291)
8 1qz1_A Neural cell adhesion mo 99.9 6.2E-26 2.1E-30 168.8 19.8 216 10-239 61-289 (291)
9 2y25_A Myomesin; structural pr 99.9 4.5E-27 1.5E-31 177.0 11.2 228 3-240 53-315 (317)
10 2yd9_A Receptor-type tyrosine- 99.9 1.3E-25 4.3E-30 168.3 18.4 214 11-242 63-293 (304)
11 2y23_A Myomesin; structural pr 99.9 2.5E-25 8.6E-30 167.1 17.7 225 2-237 47-309 (312)
12 4fqp_A Poliovirus receptor; im 99.9 1.4E-24 4.9E-29 163.2 19.6 219 10-242 78-306 (313)
13 3laf_A Deleted in colorectal c 99.9 2E-24 6.7E-29 167.8 20.2 214 10-240 176-401 (403)
14 3kld_A Contactin 4, axcam, BIG 99.9 1.3E-24 4.5E-29 167.9 18.4 214 8-239 154-382 (384)
15 2o26_X MAST/stem cell growth f 99.9 3.7E-24 1.3E-28 159.2 19.2 220 9-239 55-287 (290)
16 1ry7_B FGFR-3, fibroblast grow 99.9 1E-25 3.6E-30 170.8 10.9 230 10-244 60-331 (334)
17 3ejj_X Macrophage colony-stimu 99.9 5.4E-24 1.8E-28 158.2 19.9 224 7-240 47-281 (289)
18 1e07_A Carcinoembryonic antige 99.9 2.9E-23 9.8E-28 170.4 25.5 217 2-242 333-559 (642)
19 2ec8_A MAST/stem cell growth f 99.9 3.9E-24 1.3E-28 171.6 19.3 234 3-240 161-411 (524)
20 2ec8_A MAST/stem cell growth f 99.9 5.4E-24 1.8E-28 170.8 19.0 228 9-243 271-513 (524)
21 2ocw_A Polymeric-immunoglobuli 99.9 3.2E-23 1.1E-27 168.4 23.6 224 12-242 291-548 (585)
22 3u83_A Poliovirus receptor-rel 99.9 8E-24 2.7E-28 160.2 18.2 214 10-242 91-322 (331)
23 3rjd_A High affinity immunoglo 99.9 4.3E-23 1.5E-27 151.1 21.5 206 9-239 46-259 (262)
24 4dep_C Interleukin-1 receptor 99.9 1.2E-24 4E-29 166.1 13.5 226 8-240 76-333 (349)
25 2ocw_A Polymeric-immunoglobuli 99.9 6.4E-23 2.2E-27 166.6 24.1 218 2-227 62-313 (585)
26 4fom_A Poliovirus receptor-rel 99.9 1.1E-24 3.7E-29 163.4 12.2 220 10-242 73-302 (308)
27 1cs6_A Axonin-1; neural cell a 99.9 7.9E-24 2.7E-28 163.3 16.4 216 4-239 151-381 (382)
28 3oq3_B IFN-alpha/beta binding 99.9 2.4E-23 8E-28 157.6 17.9 219 10-238 88-328 (329)
29 4dkd_C Macrophage colony-stimu 99.9 9.5E-25 3.2E-29 162.5 9.8 223 10-243 50-284 (292)
30 2jll_A NCAM2, neural cell adhe 99.9 2E-22 6.7E-27 155.9 22.4 225 3-245 148-389 (389)
31 1e07_A Carcinoembryonic antige 99.9 5.5E-22 1.9E-26 162.8 25.5 216 2-239 155-378 (642)
32 1itb_B Type 1 interleukin-1 re 99.9 1.5E-23 5E-28 157.8 14.6 223 10-238 61-312 (315)
33 3dmk_A DOWN syndrome cell adhe 99.9 1E-22 3.6E-27 171.3 20.9 217 11-241 490-714 (816)
34 3qs9_E FL cytokine receptor; i 99.9 7.4E-23 2.5E-27 163.7 18.9 206 11-236 290-506 (527)
35 3dmk_A DOWN syndrome cell adhe 99.9 4.5E-22 1.5E-26 167.5 24.6 214 9-240 304-526 (816)
36 3vh8_G Killer cell immunoglobu 99.9 2.3E-22 7.7E-27 151.4 19.4 223 9-244 72-315 (316)
37 1bih_A Hemolin; insect immunit 99.9 9.8E-23 3.3E-27 157.9 17.9 217 3-238 154-394 (395)
38 2rcj_C Light chain; immunoglob 99.9 4E-22 1.4E-26 159.9 20.9 218 11-234 70-310 (523)
39 2v5y_A Receptor-type tyrosine- 99.9 5.3E-22 1.8E-26 165.1 22.2 218 13-243 125-357 (731)
40 3laf_A Deleted in colorectal c 99.9 4.5E-23 1.5E-27 160.2 14.7 223 3-240 70-311 (403)
41 3p3y_A Neurofascin; IG domains 99.9 3.2E-23 1.1E-27 161.0 13.4 224 3-239 164-402 (404)
42 4fa8_A Secreted protein BARF1; 99.9 5.4E-23 1.8E-27 144.6 13.2 124 10-134 68-195 (203)
43 2a38_A Titin; Z1Z2, structural 99.9 5E-22 1.7E-26 139.0 18.0 134 5-139 57-193 (194)
44 3qs7_E FL cytokine receptor; i 99.9 3.5E-22 1.2E-26 155.9 19.0 203 12-226 104-312 (423)
45 3o4o_C Interleukin-1 receptor 99.9 5.6E-23 1.9E-27 156.2 14.1 224 8-238 78-333 (339)
46 2v5m_A Dscam; neurobiology SPL 99.9 9.5E-23 3.2E-27 157.6 15.1 212 3-237 157-386 (388)
47 2wng_A Tyrosine-protein phosph 99.9 2.7E-22 9.2E-27 151.7 16.9 215 9-230 72-309 (327)
48 1qgc_4 Protein (immunoglobulin 99.9 4.3E-21 1.5E-25 150.6 23.4 227 2-228 64-321 (438)
49 2wv3_A Neuroplastin; igcam, me 99.9 2.8E-21 9.4E-26 134.9 20.0 128 10-139 55-188 (190)
50 3qs7_E FL cytokine receptor; i 99.9 1.3E-22 4.6E-27 158.2 14.6 210 19-245 199-419 (423)
51 2rik_A Titin; I-SET IG fold, p 99.9 1.1E-21 3.9E-26 145.3 18.2 133 7-140 151-283 (284)
52 2iep_A Muscle-specific kinase 99.9 7.3E-22 2.5E-26 137.9 15.8 136 2-140 53-189 (192)
53 3qs9_E FL cytokine receptor; i 99.9 2E-22 7E-27 161.1 14.5 209 16-241 196-415 (527)
54 2j8h_A Titin, connectin; cardi 99.9 1.8E-21 6.2E-26 136.5 16.8 128 12-140 63-196 (197)
55 1wio_A CD4, T-cell surface gly 99.9 3.5E-22 1.2E-26 153.2 13.4 195 8-236 139-359 (363)
56 2r15_A Myomesin-1; sarcomeric 99.9 6.8E-21 2.3E-25 135.1 19.2 138 2-140 48-209 (212)
57 1z7z_I Intercellular adhesion 99.9 1.8E-21 6E-26 153.4 16.9 214 12-241 51-283 (450)
58 3p3y_A Neurofascin; IG domains 99.9 8.1E-22 2.8E-26 153.1 14.5 222 4-240 66-311 (404)
59 2v5m_A Dscam; neurobiology SPL 99.9 4.3E-22 1.5E-26 153.9 12.9 223 9-240 57-306 (388)
60 1bih_A Hemolin; insect immunit 99.9 5E-22 1.7E-26 153.9 12.7 223 6-239 57-306 (395)
61 2rcj_C Light chain; immunoglob 99.9 5.8E-21 2E-25 153.2 19.1 216 12-233 179-413 (523)
62 1wio_A CD4, T-cell surface gly 99.9 2.2E-21 7.4E-26 148.8 15.6 208 10-238 66-291 (363)
63 2va4_A NCAM2, N-CAM 2, neural 99.9 2.4E-20 8E-25 130.2 19.3 136 2-139 49-191 (192)
64 2v44_A NCAM2, neural cell adhe 99.9 8.6E-21 2.9E-25 132.2 16.7 129 2-133 47-179 (189)
65 3lcy_A Titin; A-BAND, IG tande 99.9 2.5E-20 8.4E-25 130.6 19.0 137 3-140 53-195 (197)
66 3kld_A Contactin 4, axcam, BIG 99.9 3.7E-21 1.3E-25 148.6 15.9 127 9-140 256-382 (384)
67 2c5d_C AXL oncogene, tyrosine- 99.9 9.6E-21 3.3E-25 132.7 14.8 123 11-140 68-192 (195)
68 3rbs_A Myomesin-1; immunoglobu 99.9 5.2E-20 1.8E-24 130.0 18.4 122 12-139 62-205 (207)
69 3lcy_A Titin; A-BAND, IG tande 99.9 3.8E-20 1.3E-24 129.7 17.3 183 47-239 5-195 (197)
70 3jz7_A MCAR, CAR, coxsackievir 99.9 2.6E-21 8.9E-26 137.3 11.4 135 2-141 70-212 (214)
71 2v5t_A NCAM2, N-CAM 2, neural 99.9 4.1E-20 1.4E-24 128.7 17.2 134 3-139 50-186 (189)
72 2c1o_A IGK-C protein; FAB frag 99.9 1.5E-20 5.1E-25 137.1 15.2 207 18-230 11-245 (254)
73 1epf_A NCAM, protein (neural c 99.9 2.1E-20 7.3E-25 130.4 15.4 122 9-133 60-183 (191)
74 2a38_A Titin; Z1Z2, structural 99.9 2.4E-20 8.2E-25 130.4 15.5 181 48-238 4-193 (194)
75 2yd6_A PTPRD protein; hydrolas 99.9 6.2E-20 2.1E-24 130.3 17.8 123 10-133 62-195 (212)
76 2yd1_A Tyrosine-protein phosph 99.9 1.1E-19 3.8E-24 128.9 18.2 126 11-140 64-199 (212)
77 2nzi_A Titin; IG-domain, FNIII 99.9 2.2E-19 7.5E-24 134.3 20.2 188 48-245 3-202 (305)
78 1rhf_A Tyrosine-protein kinase 99.9 1E-19 3.5E-24 126.0 17.1 120 11-139 60-181 (182)
79 3mjg_X Beta-type platelet-deri 99.8 1.1E-19 3.6E-24 135.0 17.5 217 11-242 51-280 (289)
80 1f97_A Junction adhesion molec 99.8 3.1E-20 1.1E-24 131.6 13.8 136 3-140 59-206 (212)
81 2yd1_A Tyrosine-protein phosph 99.8 5.9E-19 2E-23 125.2 20.4 181 48-242 5-202 (212)
82 2yd6_A PTPRD protein; hydrolas 99.8 1.1E-18 3.7E-23 123.8 20.8 177 47-234 4-197 (212)
83 3r4d_A CEA-related cell adhesi 99.8 1.1E-19 3.9E-24 128.4 15.2 132 3-140 64-199 (208)
84 2oz4_A Intercellular adhesion 99.8 5.2E-20 1.8E-24 135.1 13.5 197 9-239 54-263 (265)
85 1igt_B IGG2A intact antibody - 99.8 4.9E-20 1.7E-24 144.9 14.0 223 2-230 66-331 (444)
86 1cs6_A Axonin-1; neural cell a 99.8 1.2E-19 4.1E-24 140.0 15.9 127 9-140 255-381 (382)
87 1za6_B IGG heavy chain; immuno 99.8 4E-20 1.4E-24 140.7 13.0 124 2-132 66-208 (344)
88 2y25_A Myomesin; structural pr 99.8 3.3E-19 1.1E-23 134.0 17.8 137 3-140 154-314 (317)
89 2wim_A N-CAM 2, NCAM2, neural 99.8 2.1E-19 7E-24 133.6 16.1 139 3-144 146-287 (291)
90 3ejj_X Macrophage colony-stimu 99.8 4.9E-19 1.7E-23 131.4 17.8 141 3-144 137-284 (289)
91 2j8h_A Titin, connectin; cardi 99.8 7.8E-19 2.7E-23 123.0 17.9 181 48-238 3-195 (197)
92 3v2a_R Vascular endothelial gr 99.8 2.6E-22 9E-27 167.9 0.0 219 11-243 515-759 (772)
93 1qz1_A Neural cell adhesion mo 99.8 2.5E-19 8.6E-24 133.1 16.1 129 10-140 154-289 (291)
94 2x1w_L Vascular endothelial gr 99.8 1.5E-19 5E-24 128.4 13.8 134 10-143 63-209 (213)
95 2o26_X MAST/stem cell growth f 99.8 1.7E-19 5.8E-24 134.0 14.1 138 3-141 138-288 (290)
96 1hng_A CD2; T lymphocyte adhes 99.8 7.4E-20 2.5E-24 126.0 11.1 120 2-138 53-173 (176)
97 3s97_C Contactin-1; carbonic a 99.8 3.2E-19 1.1E-23 125.3 14.3 133 4-140 59-200 (201)
98 3grw_A Fibroblast growth facto 99.8 5.4E-19 1.9E-23 127.8 15.9 138 5-143 66-220 (241)
99 3sbw_C Programmed cell death 1 99.8 5.5E-19 1.9E-23 126.1 15.5 131 11-143 80-213 (222)
100 2d9q_B Granulocyte colony-stim 99.8 1.2E-17 4.2E-22 125.4 23.6 226 11-245 61-310 (313)
101 1qgc_4 Protein (immunoglobulin 99.8 8.9E-20 3.1E-24 143.1 12.4 214 11-231 181-430 (438)
102 2wv3_A Neuroplastin; igcam, me 99.8 8.1E-18 2.8E-22 117.2 20.7 175 48-239 2-189 (190)
103 1i1r_A GP130, interleukin-6 re 99.8 4.8E-17 1.6E-21 121.6 26.0 209 11-243 65-302 (303)
104 3k0w_A Mucosa-associated lymph 99.8 8E-19 2.7E-23 125.1 15.4 122 10-140 64-201 (218)
105 1hzh_H IGG, immunoglobulin hea 99.8 5.4E-19 1.8E-23 139.5 15.9 167 2-169 66-278 (457)
106 4fqp_A Poliovirus receptor; im 99.8 3E-19 1E-23 134.2 13.5 129 11-145 177-308 (313)
107 2c5d_C AXL oncogene, tyrosine- 99.8 1E-17 3.5E-22 117.2 20.3 175 49-238 2-191 (195)
108 3b5h_A Cervical EMMPRIN, HAB18 99.8 3.4E-18 1.2E-22 118.5 17.5 123 12-140 52-182 (184)
109 3v2a_R Vascular endothelial gr 99.8 7.6E-19 2.6E-23 147.0 16.5 215 8-235 180-412 (772)
110 3bp6_B Programmed cell death 1 99.8 4.9E-19 1.7E-23 124.6 12.9 127 10-140 66-192 (202)
111 2va4_A NCAM2, N-CAM 2, neural 99.8 4E-18 1.4E-22 118.9 17.1 178 49-238 2-191 (192)
112 1z7z_I Intercellular adhesion 99.8 1.8E-18 6.1E-23 136.3 16.2 191 11-228 142-351 (450)
113 1iga_A IGA1; immunoglobulin; N 99.8 7.8E-18 2.7E-22 133.5 19.9 226 2-231 67-336 (475)
114 3rbs_A Myomesin-1; immunoglobu 99.8 7.6E-18 2.6E-22 118.9 17.7 177 50-236 4-203 (207)
115 2yd9_A Receptor-type tyrosine- 99.8 1.5E-18 5.2E-23 129.8 14.5 128 10-143 163-293 (304)
116 1nbq_A JAM, junctional adhesio 99.8 6.4E-20 2.2E-24 129.7 6.5 127 3-131 62-197 (209)
117 1n26_A IL-6 receptor alpha cha 99.8 1.3E-16 4.4E-21 120.4 24.5 216 9-243 58-298 (325)
118 1nqb_A Single-chain antibody f 99.8 6.5E-18 2.2E-22 123.3 16.9 143 2-144 66-236 (256)
119 3grw_A Fibroblast growth facto 99.8 2.6E-18 8.9E-23 124.2 14.7 193 48-244 10-222 (241)
120 2fbo_J V1V2;, variable region- 99.8 2E-18 6.8E-23 125.4 14.1 128 11-138 90-249 (250)
121 2iep_A Muscle-specific kinase 99.8 2E-18 6.9E-23 120.4 13.6 179 47-240 5-190 (192)
122 1igy_B IGG1 intact antibody MA 99.8 2.1E-20 7.2E-25 146.6 3.7 224 2-232 65-323 (434)
123 1itb_B Type 1 interleukin-1 re 99.8 6.1E-18 2.1E-22 127.1 16.9 134 7-140 158-313 (315)
124 3ojm_B Fibroblast growth facto 99.8 4.1E-18 1.4E-22 122.2 15.1 193 48-245 14-226 (231)
125 1dr9_A B7-1 (CD80), T lymphocy 99.8 1.2E-17 4.3E-22 117.3 17.2 126 9-138 63-198 (201)
126 2v44_A NCAM2, neural cell adhe 99.8 1.6E-17 5.4E-22 115.6 17.4 167 54-234 7-181 (189)
127 2ifg_A High affinity nerve gro 99.8 7E-19 2.4E-23 134.0 11.4 127 10-141 211-345 (347)
128 3ojm_B Fibroblast growth facto 99.8 3E-18 1E-22 122.9 14.1 137 5-142 70-222 (231)
129 3knb_B Obscurin-like protein 1 99.8 2.8E-18 9.6E-23 107.8 12.2 94 48-141 12-105 (107)
130 3p2t_A Leukocyte immunoglobuli 99.8 2.8E-18 9.5E-23 120.2 13.5 178 49-239 5-193 (196)
131 3sgj_C Human FCG3A receptor; r 99.8 1.4E-18 4.8E-23 122.5 11.9 120 9-140 52-173 (204)
132 1ugn_A LIR1, leukocyte immunog 99.8 5.1E-18 1.7E-22 119.1 14.6 119 9-129 56-181 (198)
133 2v9r_A Roundabout homolog 1; p 99.8 1.5E-18 5E-23 123.0 11.9 126 13-141 74-202 (212)
134 1epf_A NCAM, protein (neural c 99.8 1.5E-17 5.1E-22 115.9 16.9 173 49-232 2-183 (191)
135 1vca_A VCAM-D1,2, human vascul 99.8 1.8E-18 6.1E-23 121.7 12.2 121 9-130 52-179 (202)
136 2vr9_A Roundabout 1, ROBO; imm 99.8 1.3E-18 4.5E-23 123.8 11.6 121 14-137 72-202 (217)
137 3sgj_C Human FCG3A receptor; r 99.8 5.2E-18 1.8E-22 119.5 14.5 167 49-242 7-176 (204)
138 3mj8_L Stimulatory hamster ant 99.8 5E-18 1.7E-22 120.4 14.3 134 3-136 60-208 (213)
139 1rhf_A Tyrosine-protein kinase 99.8 2.4E-17 8.2E-22 114.0 17.1 173 49-238 2-181 (182)
140 3oq3_B IFN-alpha/beta binding 99.8 2.9E-17 1E-21 124.2 19.0 129 10-139 181-328 (329)
141 2if7_A SLAM family member 6; N 99.8 1.2E-17 4.1E-22 116.6 15.7 120 2-136 62-187 (193)
142 2r15_A Myomesin-1; sarcomeric 99.8 9.2E-18 3.1E-22 118.9 15.3 169 62-239 15-209 (212)
143 4dep_C Interleukin-1 receptor 99.8 2.2E-19 7.6E-24 136.9 7.1 143 4-146 170-338 (349)
144 4dkd_C Macrophage colony-stimu 99.8 4.3E-18 1.5E-22 126.5 13.6 131 11-141 144-281 (292)
145 3p2t_A Leukocyte immunoglobuli 99.8 4.8E-18 1.6E-22 119.0 13.0 118 10-129 57-179 (196)
146 3eow_R Poliovirus receptor; im 99.8 5.2E-19 1.8E-23 126.3 7.9 141 2-144 62-215 (221)
147 2v5y_A Receptor-type tyrosine- 99.8 5.9E-17 2E-21 134.9 21.3 219 11-245 223-462 (731)
148 1ry7_B FGFR-3, fibroblast grow 99.8 8.1E-19 2.8E-23 132.9 9.2 137 8-145 177-331 (334)
149 4fa8_A Secreted protein BARF1; 99.8 2.8E-18 9.4E-23 120.6 11.2 164 59-231 3-193 (203)
150 1fnl_A Low affinity immunoglob 99.8 7.1E-18 2.4E-22 116.0 13.0 122 6-139 49-172 (175)
151 3uzq_A Anti-dengue MAB 4E11; d 99.8 8.4E-18 2.9E-22 122.5 14.1 127 2-128 67-230 (253)
152 2d3v_A Leukocyte immunoglobuli 99.8 1.1E-18 3.6E-23 122.4 8.9 118 10-129 57-180 (196)
153 2vr9_A Roundabout 1, ROBO; imm 99.8 6.6E-18 2.2E-22 120.1 13.1 190 48-242 8-208 (217)
154 1i1r_A GP130, interleukin-6 re 99.8 3.3E-17 1.1E-21 122.5 17.4 166 55-233 10-188 (303)
155 1f97_A Junction adhesion molec 99.8 4.8E-17 1.6E-21 115.1 17.3 176 50-239 2-204 (212)
156 2ghw_B Anti-SARS SCFV antibody 99.8 2.7E-17 9.4E-22 119.3 16.3 127 2-128 68-228 (247)
157 2d3v_A Leukocyte immunoglobuli 99.8 2.6E-17 9E-22 115.2 15.3 180 48-239 4-194 (196)
158 1f3r_B FV antibody fragment; I 99.8 1.4E-17 4.8E-22 121.6 14.3 127 2-128 65-232 (257)
159 2ny1_B T-cell surface glycopro 99.8 4.9E-18 1.7E-22 117.7 11.2 115 10-143 67-181 (184)
160 1oll_A NK receptor; immune sys 99.8 7.1E-18 2.4E-22 117.4 11.9 114 9-128 55-172 (188)
161 3umt_A SCFV heavy chain and li 99.8 3.1E-17 1.1E-21 119.7 15.8 127 2-128 68-231 (256)
162 1f2q_A High affinity immunoglo 99.8 8.7E-18 3E-22 115.6 12.1 121 8-140 48-170 (176)
163 2pet_A Lutheran blood group gl 99.8 9.2E-18 3.1E-22 120.5 12.7 120 6-127 73-211 (231)
164 2ifg_A High affinity nerve gro 99.8 2.3E-19 7.8E-24 136.7 4.5 206 22-239 136-344 (347)
165 2wqr_A IG epsilon chain C regi 99.8 6.2E-19 2.1E-23 133.0 6.8 215 12-229 73-309 (323)
166 3d9a_L Light chain of hyhel10 99.8 4.5E-18 1.5E-22 120.7 10.9 130 2-131 60-203 (213)
167 4frw_A Poliovirus receptor-rel 99.8 1.4E-17 4.8E-22 118.2 13.3 129 11-139 79-209 (218)
168 4f80_A Butyrophilin subfamily 99.8 9.3E-18 3.2E-22 120.2 12.4 128 10-140 82-212 (226)
169 1uct_A Immunoglobulin alpha FC 99.8 8.1E-18 2.8E-22 119.7 11.9 112 12-128 65-180 (218)
170 2p1y_A Bispecific alpha/beta T 99.8 2.1E-17 7E-22 119.3 14.2 126 3-128 62-222 (238)
171 3u83_A Poliovirus receptor-rel 99.8 5E-18 1.7E-22 128.4 11.4 125 11-142 194-321 (331)
172 1f2q_A High affinity immunoglo 99.8 1.4E-17 5E-22 114.5 12.8 169 47-242 2-173 (176)
173 2y23_A Myomesin; structural pr 99.8 2E-17 6.9E-22 124.0 14.3 122 12-139 167-310 (312)
174 3knb_A Titin; IG-like, titin, 99.8 3.4E-17 1.2E-21 101.6 12.9 92 49-140 5-98 (100)
175 1igt_B IGG2A intact antibody - 99.8 5.3E-18 1.8E-22 133.4 11.5 167 11-180 184-386 (444)
176 1iga_A IGA1; immunoglobulin; N 99.8 1.1E-16 3.7E-21 126.9 19.0 154 12-167 191-377 (475)
177 1hnf_A CD2; T lymphocyte adhes 99.8 1.8E-17 6.3E-22 114.3 12.7 116 2-137 58-177 (182)
178 1vca_A VCAM-D1,2, human vascul 99.8 4E-16 1.4E-20 109.6 19.7 166 59-231 11-181 (202)
179 1q0x_L FAB 9B1, light chain; a 99.8 2E-17 7E-22 117.2 13.1 133 3-135 63-209 (212)
180 2gi7_A GPVI protein; IG-like d 99.8 8.2E-18 2.8E-22 116.6 10.7 116 8-129 49-168 (184)
181 2v5t_A NCAM2, N-CAM 2, neural 99.8 2E-17 6.8E-22 115.0 12.6 176 49-239 2-187 (189)
182 1lk3_L 9D7 light chain; antige 99.8 1.3E-17 4.4E-22 118.1 11.8 129 2-130 59-201 (210)
183 3bp6_B Programmed cell death 1 99.7 3.3E-17 1.1E-21 115.2 13.7 172 56-238 9-191 (202)
184 1fnl_A Low affinity immunoglob 99.7 9.4E-17 3.2E-21 110.3 15.4 155 48-229 6-162 (175)
185 3tv3_L PGT128 light chain, IG 99.7 9.3E-18 3.2E-22 118.9 10.5 135 2-136 57-206 (211)
186 3mj6_A Junctional adhesion mol 99.7 3.3E-17 1.1E-21 120.3 13.7 132 11-147 84-243 (268)
187 3juy_B 3B3 single chain varian 99.7 5.8E-17 2E-21 118.2 14.7 127 2-128 72-243 (256)
188 4i0k_A CD276 antigen; immunogl 99.7 1.3E-17 4.5E-22 119.0 11.0 131 10-143 71-208 (222)
189 3s96_B 3B5H10 FAB light chain; 99.7 1.6E-17 5.5E-22 118.2 11.4 133 3-135 65-214 (218)
190 1jbj_A CD3 epsilon and gamma e 99.7 5.5E-18 1.9E-22 117.7 8.6 112 9-131 42-179 (186)
191 3gkz_A Anti-methamphetamine si 99.7 3.4E-17 1.2E-21 119.5 13.1 127 2-128 73-235 (257)
192 3jz7_A MCAR, CAR, coxsackievir 99.7 6.2E-17 2.1E-21 114.6 13.9 173 56-239 7-211 (214)
193 1q9r_B S25-2 FAB (IGG1K) heavy 99.7 4.5E-17 1.5E-21 116.3 13.0 133 2-135 68-217 (222)
194 4fom_A Poliovirus receptor-rel 99.7 5.2E-18 1.8E-22 127.1 8.2 127 11-142 172-301 (308)
195 3pv7_A B7-H6, IG-like domain-c 99.7 9.6E-17 3.3E-21 116.5 14.6 127 11-139 82-224 (248)
196 1uct_A Immunoglobulin alpha FC 99.7 3.3E-16 1.1E-20 111.4 17.0 180 48-242 8-198 (218)
197 2d9q_B Granulocyte colony-stim 99.7 9.3E-17 3.2E-21 120.6 14.6 175 57-239 8-196 (313)
198 3k0w_A Mucosa-associated lymph 99.7 2.8E-16 9.5E-21 111.8 16.3 157 48-230 17-191 (218)
199 2xzc_L FAB A.17 light chain; i 99.7 4.7E-17 1.6E-21 115.7 12.3 129 3-131 62-205 (216)
200 3ry4_A Low affinity immunoglob 99.7 3.5E-16 1.2E-20 106.9 16.1 154 49-229 4-159 (170)
201 1ugn_A LIR1, leukocyte immunog 99.7 8.1E-17 2.8E-21 112.9 13.1 181 48-239 4-195 (198)
202 1c1e_H Catalytic antibody 1E9 99.7 5.9E-17 2E-21 115.4 12.5 134 2-136 66-215 (219)
203 3ry4_A Low affinity immunoglob 99.7 5E-17 1.7E-21 111.1 11.6 117 10-138 50-168 (170)
204 1qok_A MFE-23 recombinant anti 99.7 1.2E-16 4.2E-21 118.1 14.6 126 2-128 92-254 (282)
205 2gi7_A GPVI protein; IG-like d 99.7 4.3E-16 1.5E-20 107.9 16.4 167 48-239 7-182 (184)
206 3nl4_L Antigen binding fragmen 99.7 1.6E-16 5.6E-21 112.6 14.6 124 2-125 60-198 (213)
207 2v9r_A Roundabout homolog 1; p 99.7 1.4E-16 4.8E-21 112.7 13.9 181 48-242 8-204 (212)
208 3o4o_C Interleukin-1 receptor 99.7 5.3E-18 1.8E-22 128.7 6.9 138 3-140 172-334 (339)
209 1ccz_A Protein (CD58); LFA-3, 99.7 3.4E-17 1.2E-21 112.0 10.2 114 2-137 51-167 (171)
210 3auv_A SC-DSFV derived from th 99.7 2.6E-16 8.9E-21 116.1 15.6 126 2-127 71-235 (276)
211 2zg1_A Sialic acid-binding IG- 99.7 5.4E-17 1.9E-21 115.1 11.4 127 2-137 69-211 (214)
212 2c1o_A IGK-C protein; FAB frag 99.7 3.4E-17 1.2E-21 119.3 10.5 129 2-130 102-244 (254)
213 3mjg_X Beta-type platelet-deri 99.7 8.5E-17 2.9E-21 119.4 12.8 122 19-140 149-277 (289)
214 1moe_A Anti-CEA MAB T84.66; an 99.7 3.5E-16 1.2E-20 112.9 15.2 126 2-127 64-220 (240)
215 2znx_A SCFV; fluorotryptohpan, 99.7 2.7E-16 9.1E-21 113.8 14.6 126 2-127 60-222 (242)
216 1oll_A NK receptor; immune sys 99.7 1.5E-15 5.1E-20 105.5 17.8 176 49-240 4-186 (188)
217 1mju_H Immunoglobulin MS6-12; 99.7 7.5E-17 2.6E-21 115.5 11.5 138 2-140 66-216 (227)
218 1p6f_A NKP46, natural cytotoxi 99.7 1.7E-16 6E-21 114.5 13.4 113 10-128 59-175 (242)
219 1nbq_A JAM, junctional adhesio 99.7 4.4E-17 1.5E-21 115.0 10.0 182 49-237 4-204 (209)
220 4fmk_A Poliovirus receptor-rel 99.7 1.8E-16 6E-21 113.0 13.1 127 10-136 82-212 (225)
221 1zvo_C Myeloma immunoglobulin 99.7 4.5E-15 1.5E-19 118.7 22.5 132 2-134 67-225 (512)
222 3r06_A Anti-mouse CD3epsilon a 99.7 1.1E-16 3.9E-21 113.4 12.0 129 2-130 60-202 (213)
223 3d9a_H Heavy chain of hyhel10 99.7 1E-16 3.4E-21 113.5 11.5 130 2-134 65-207 (210)
224 1mq8_A ICAM-1, intercellular a 99.7 2.3E-17 7.7E-22 121.5 8.2 218 12-244 51-286 (291)
225 2dru_A Chimera of CD48 antigen 99.7 1.2E-16 4E-21 110.3 11.3 116 2-136 60-176 (180)
226 1pz5_B Heavy chain of FAB (SYA 99.7 4E-16 1.4E-20 111.2 14.4 129 2-136 68-216 (220)
227 3sob_L Antibody light chain; b 99.7 8.2E-17 2.8E-21 116.0 10.9 131 2-132 83-227 (237)
228 1nkr_A P58-CL42 KIR; inhibitor 99.7 4.1E-16 1.4E-20 109.6 14.0 115 10-128 62-184 (201)
229 4f80_A Butyrophilin subfamily 99.7 5.1E-16 1.7E-20 111.1 14.3 176 57-239 12-212 (226)
230 3qp3_A Titin; I-SET IG-like, s 99.7 2.7E-16 9.1E-21 98.3 11.3 94 47-140 6-99 (103)
231 1svz_A Immunoglobulin;, single 99.7 6E-16 2.1E-20 112.2 14.7 126 2-127 65-228 (247)
232 1nfd_E H57 FAB; complex (immun 99.7 1E-17 3.5E-22 118.7 5.2 130 2-131 58-202 (212)
233 1dee_B IGM RF 2A2; FAB-IBP com 99.7 1.5E-15 5.3E-20 108.4 16.3 134 2-135 66-221 (223)
234 3ux9_B SCFV antibody; five hel 99.7 1.6E-15 5.5E-20 110.6 16.5 126 2-128 63-236 (256)
235 2cqv_A MLCK, myosin light chai 99.7 9.8E-16 3.4E-20 97.6 13.5 98 48-145 6-105 (114)
236 3b5h_A Cervical EMMPRIN, HAB18 99.7 2.7E-15 9.3E-20 103.8 16.3 162 60-239 9-182 (184)
237 3esu_F Antibody 14B7* light ch 99.7 5.7E-16 2E-20 112.5 13.4 115 12-126 75-231 (250)
238 3rjd_A High affinity immunoglo 99.7 1.5E-15 5.2E-20 110.9 15.1 165 49-240 1-167 (262)
239 3r4d_A CEA-related cell adhesi 99.7 5.5E-15 1.9E-19 104.2 17.5 164 59-239 9-197 (208)
240 2oz4_A Intercellular adhesion 99.7 1.6E-16 5.4E-21 116.5 9.8 118 10-140 141-263 (265)
241 3bae_H WO2 IGG2A FAB fragment 99.7 6.4E-16 2.2E-20 110.8 12.6 134 2-136 67-221 (228)
242 2gki_A Nuclease; anti-DNA anti 99.7 3.8E-16 1.3E-20 116.0 11.7 127 2-128 88-258 (291)
243 2j6e_L IGM, FAB light chain; a 99.7 5E-17 1.7E-21 116.9 6.6 133 3-135 81-229 (234)
244 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.7 1.5E-15 5.3E-20 110.7 14.6 120 10-130 75-235 (256)
245 1p6f_A NKP46, natural cytotoxi 99.7 8.4E-15 2.9E-19 105.7 18.1 178 48-241 6-190 (242)
246 2fbj_H IGA-kappa J539 FAB (hea 99.7 7.5E-16 2.6E-20 109.8 12.5 130 2-132 66-212 (220)
247 3bkj_L WO2 IGG2A FAB fragment 99.7 2.2E-16 7.6E-21 114.9 10.0 129 2-130 98-240 (252)
248 3puc_A Titin; I-SET IG-like do 99.7 2E-15 6.8E-20 93.6 12.9 93 48-140 5-97 (99)
249 1igy_B IGG1 intact antibody MA 99.7 5.4E-18 1.9E-22 132.9 1.4 169 11-181 180-377 (434)
250 1b6u_A KIR2DL3, P58 killer cel 99.7 7.5E-16 2.6E-20 112.1 12.3 114 10-127 61-182 (257)
251 3fku_X Neutralizing antibody F 99.7 7.5E-16 2.5E-20 113.8 12.1 126 2-128 66-234 (280)
252 3irg_B Obscurin-like protein 1 99.7 1.6E-15 5.4E-20 95.5 11.9 95 47-141 11-105 (107)
253 1zvo_C Myeloma immunoglobulin 99.7 2.3E-14 7.8E-19 114.6 21.4 173 60-234 308-497 (512)
254 3s97_C Contactin-1; carbonic a 99.7 1.8E-16 6.1E-21 111.2 7.8 172 55-239 14-200 (201)
255 2fbo_J V1V2;, variable region- 99.7 8.2E-16 2.8E-20 111.6 11.5 170 56-229 9-238 (250)
256 1dn0_B IGM-kappa cold agglutin 99.7 9.8E-15 3.4E-19 104.8 17.0 138 2-139 65-225 (232)
257 3m8o_H Immunoglobulin A1 heavy 99.7 4.6E-15 1.6E-19 105.8 15.1 123 2-131 68-213 (221)
258 1g1c_A Immunoglobulin-like dom 99.7 5.9E-15 2E-19 91.4 13.5 93 48-140 4-97 (99)
259 1op3_H FAB 2G12, heavy chain; 99.7 7.9E-16 2.7E-20 110.1 10.9 129 2-131 66-215 (225)
260 1x9q_A SCFV, 4M5.3 anti-fluore 99.7 3.5E-15 1.2E-19 109.5 14.6 126 2-127 79-254 (268)
261 2gjj_A A21 single-chain antibo 99.7 6.8E-15 2.3E-19 107.7 16.0 126 2-127 70-239 (264)
262 2x1w_L Vascular endothelial gr 99.7 3.6E-15 1.2E-19 105.7 13.9 182 56-242 14-209 (213)
263 2kdg_A Myotilin; immonoglobuli 99.6 2.2E-15 7.4E-20 93.6 10.7 94 48-141 4-98 (100)
264 1wit_A Twitchin 18TH IGSF modu 99.6 2.8E-15 9.7E-20 91.8 10.8 89 49-139 2-92 (93)
265 3liz_H 4C3 monoclonal antibody 99.6 4.3E-15 1.5E-19 108.1 13.5 132 2-139 66-218 (253)
266 3auv_A SC-DSFV derived from th 99.6 1.7E-13 5.7E-18 101.0 22.2 179 49-227 12-236 (276)
267 1hzh_H IGG, immunoglobulin hea 99.6 1.9E-15 6.6E-20 119.2 12.4 153 12-167 195-382 (457)
268 1u2h_A APEG-1, aortic preferen 99.6 7.7E-15 2.6E-19 90.9 12.7 93 48-140 4-97 (99)
269 3mj8_L Stimulatory hamster ant 99.6 2.7E-15 9.1E-20 106.3 11.9 174 51-229 3-202 (213)
270 2e7c_A Myosin-binding protein 99.6 5.7E-15 2E-19 94.6 12.2 94 48-142 20-116 (118)
271 3d9a_L Light chain of hyhel10 99.6 8.6E-15 3E-19 103.6 14.3 176 53-230 5-203 (213)
272 2ny1_B T-cell surface glycopro 99.6 3.3E-15 1.1E-19 103.4 11.8 164 58-245 4-184 (184)
273 3irg_A Titin; IG-like, titin, 99.6 9.3E-15 3.2E-19 90.7 12.7 92 49-140 5-98 (100)
274 1sy6_A T-cell surface glycopro 99.6 8.1E-16 2.8E-20 108.3 8.7 121 9-139 47-202 (204)
275 2znx_A SCFV; fluorotryptohpan, 99.6 4.3E-14 1.5E-18 102.2 17.9 176 52-227 4-223 (242)
276 1lk3_L 9D7 light chain; antige 99.6 1.3E-14 4.3E-19 102.6 14.8 174 56-230 7-202 (210)
277 2wng_A Tyrosine-protein phosph 99.6 2.5E-14 8.6E-19 107.9 17.0 175 52-230 6-206 (327)
278 1fhg_A Telokin; immunoglobulin 99.6 5.6E-15 1.9E-19 99.2 12.0 104 40-143 32-136 (154)
279 1gsm_A Madcam-1, mucosal addre 99.6 1.1E-14 3.7E-19 101.8 13.7 124 3-129 51-193 (210)
280 1nct_A Titin; cell adhesion, g 99.6 1.4E-15 4.7E-20 95.5 8.4 93 48-140 13-105 (106)
281 1hng_A CD2; T lymphocyte adhes 99.6 4.2E-15 1.4E-19 102.1 11.5 152 58-236 5-172 (176)
282 3r06_A Anti-mouse CD3epsilon a 99.6 2.1E-14 7.2E-19 101.6 15.5 131 50-180 2-152 (213)
283 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.6 8.5E-14 2.9E-18 101.4 19.1 175 51-228 5-234 (256)
284 1nkr_A P58-CL42 KIR; inhibitor 99.6 1.2E-14 4.2E-19 102.0 13.7 180 48-239 7-199 (201)
285 3bqu_C 3H6 FAB light chain; be 99.6 3E-16 1E-20 112.8 5.5 120 10-129 92-223 (233)
286 3nl4_H Antigen binding fragmen 99.6 2.4E-15 8.2E-20 106.8 10.0 134 2-138 64-211 (215)
287 3omz_A Human vdelta1 gamma del 99.6 7.6E-15 2.6E-19 107.2 13.0 119 9-127 77-231 (259)
288 2bk8_A Connectin, M1, titin he 99.6 2.9E-14 9.8E-19 88.0 13.6 88 53-140 5-93 (97)
289 3esu_F Antibody 14B7* light ch 99.6 8.2E-14 2.8E-18 101.1 18.2 174 52-225 7-231 (250)
290 2yuz_A Myosin-binding protein 99.6 6E-15 2.1E-19 91.4 10.4 88 49-138 7-94 (100)
291 3nl4_L Antigen binding fragmen 99.6 3.1E-14 1E-18 100.8 15.5 117 50-166 2-140 (213)
292 1b6u_A KIR2DL3, P58 killer cel 99.6 3.5E-14 1.2E-18 103.2 16.1 183 48-242 6-201 (257)
293 2kkq_A Myotilin; unknown funct 99.6 1.8E-14 6E-19 91.9 12.2 96 48-143 14-111 (116)
294 3vh8_G Killer cell immunoglobu 99.6 1.2E-14 4.1E-19 109.2 13.3 174 42-229 17-199 (316)
295 2kbg_A N-CAM 2, neural cell ad 99.6 6.3E-15 2.2E-19 92.7 9.8 94 140-245 8-104 (114)
296 3sob_L Antibody light chain; b 99.6 4.3E-14 1.5E-18 101.7 15.6 178 50-230 25-226 (237)
297 3sbw_C Programmed cell death 1 99.6 1.6E-14 5.5E-19 102.9 13.2 176 56-241 8-212 (222)
298 2zg1_A Sialic acid-binding IG- 99.6 4.5E-14 1.5E-18 100.0 15.3 170 56-238 7-211 (214)
299 3kvq_A Vascular endothelial gr 99.6 2.7E-15 9.1E-20 94.6 8.0 100 42-143 3-102 (108)
300 3pl6_D MBP peptide / T-cell re 99.6 7E-15 2.4E-19 107.9 11.4 129 2-130 88-241 (268)
301 1c5d_H Monoclonal antibody aga 99.6 1.5E-14 5.2E-19 102.6 12.5 132 2-135 65-210 (215)
302 1moe_A Anti-CEA MAB T84.66; an 99.6 1.7E-13 5.9E-18 98.7 18.2 175 52-226 4-220 (240)
303 2xqy_G A13-D6.3 monoclonal ant 99.6 1.8E-14 6E-19 105.3 13.0 128 2-130 72-214 (261)
304 3mj6_A Junctional adhesion mol 99.6 1.4E-14 4.8E-19 106.2 12.5 185 50-239 6-236 (268)
305 4dzb_B Vbeta2 (MAIT T cell rec 99.6 1E-14 3.4E-19 105.7 11.6 130 2-131 65-221 (246)
306 3q5y_A TCR N15 beta; IG, T cel 99.6 1.3E-14 4.5E-19 104.7 12.0 129 2-130 63-213 (240)
307 1svz_A Immunoglobulin;, single 99.6 1.4E-13 4.9E-18 99.6 17.2 175 52-226 4-228 (247)
308 1hxm_B Gamma-delta T-cell rece 99.6 7E-15 2.4E-19 106.3 10.0 136 2-139 67-227 (242)
309 2vol_A Murine IGG FC; FC, zinc 99.6 1.7E-15 5.7E-20 107.0 6.5 119 11-129 68-196 (207)
310 2p1y_A Bispecific alpha/beta T 99.6 3.6E-13 1.2E-17 96.9 19.0 173 52-227 3-222 (238)
311 2q7n_A Leukemia inhibitory fac 99.6 1.3E-13 4.6E-18 108.5 17.9 217 10-244 250-488 (488)
312 1n26_A IL-6 receptor alpha cha 99.6 8.8E-14 3E-18 104.9 16.2 166 52-231 9-183 (325)
313 1wwb_X Protein (brain derived 99.6 4.5E-14 1.5E-18 88.0 12.1 82 62-143 14-100 (103)
314 4frw_A Poliovirus receptor-rel 99.6 5.3E-14 1.8E-18 99.6 14.0 174 56-236 6-207 (218)
315 1jbj_A CD3 epsilon and gamma e 99.6 5.5E-15 1.9E-19 102.5 8.6 142 60-230 10-179 (186)
316 2dm2_A Palladin; beta-sandwich 99.6 1.3E-14 4.4E-19 91.7 9.6 93 48-140 7-101 (110)
317 4fmk_A Poliovirus receptor-rel 99.6 4.6E-14 1.6E-18 100.4 13.5 176 58-237 10-214 (225)
318 2yr3_A Myosin light chain kina 99.6 1E-14 3.4E-19 90.4 8.8 91 46-139 8-98 (99)
319 1waa_A Titin; metal binding pr 99.6 2E-14 7E-19 87.7 9.9 79 49-128 5-83 (93)
320 2edj_A Roundabout homolog 2; K 99.6 1.8E-14 6E-19 89.4 9.7 91 48-141 7-98 (100)
321 2edh_A Obscurin; structural ge 99.6 2.5E-14 8.7E-19 90.8 10.5 102 38-145 7-109 (113)
322 3bn9_D E2 FAB heavy chain; ant 99.6 5.4E-15 1.9E-19 107.6 8.3 129 2-131 66-220 (257)
323 3ux9_B SCFV antibody; five hel 99.6 3.4E-13 1.2E-17 98.2 17.9 170 57-226 10-235 (256)
324 4ei6_B Vbeta16 XV19 type II na 99.6 3.8E-14 1.3E-18 102.6 12.7 129 2-130 64-219 (245)
325 3nfj_J T cell receptor beta ch 99.6 3.6E-14 1.2E-18 102.7 12.4 130 2-131 62-220 (245)
326 2ghw_B Anti-SARS SCFV antibody 99.6 9.1E-13 3.1E-17 95.4 19.8 167 58-227 11-228 (247)
327 3o3u_N Maltose-binding peripla 99.6 5.7E-14 1.9E-18 114.1 14.6 125 3-130 425-566 (581)
328 2cry_A KIN of IRRE-like protei 99.6 8.6E-16 2.9E-20 99.1 3.1 104 38-142 3-114 (122)
329 1wwc_A Protein (NT-3 growth fa 99.6 3.5E-14 1.2E-18 90.9 10.7 98 43-143 2-103 (118)
330 1gxe_A Myosin binding protein 99.6 1.8E-14 6.1E-19 94.5 9.3 85 56-140 25-138 (139)
331 2gjj_A A21 single-chain antibo 99.6 6.7E-13 2.3E-17 97.1 18.8 177 50-226 6-239 (264)
332 2edf_A Obscurin; beta-sandwich 99.6 2.3E-14 7.9E-19 89.4 9.2 94 48-144 7-100 (103)
333 2ckn_A Basic fibroblast growth 99.6 3.4E-14 1.1E-18 87.3 9.7 86 49-139 9-94 (95)
334 2dm3_A KIAA0992 protein, palla 99.6 1.5E-14 5.1E-19 91.4 8.3 93 48-140 8-101 (110)
335 1x44_A Myosin-binding protein 99.6 4.1E-14 1.4E-18 88.3 10.2 89 52-143 10-100 (103)
336 2e6p_A Obscurin-like protein 1 99.6 2.7E-14 9.3E-19 89.3 9.2 93 49-144 7-102 (104)
337 3bkj_L WO2 IGG2A FAB fragment 99.6 1.3E-13 4.3E-18 100.3 14.0 180 49-230 34-241 (252)
338 1nqb_A Single-chain antibody f 99.6 1.6E-12 5.3E-17 94.7 19.7 171 56-227 7-219 (256)
339 2rgs_A I, IG gamma-2B heavy ch 99.6 3.4E-15 1.1E-19 106.2 5.4 119 11-129 76-204 (218)
340 1q0x_L FAB 9B1, light chain; a 99.6 1.1E-13 3.6E-18 98.0 13.1 112 56-167 7-142 (212)
341 3qhz_H Human monoclonal antibo 99.6 1.4E-13 4.6E-18 98.9 13.7 136 2-138 70-226 (232)
342 3qib_D 2B4 beta chain; IG doma 99.6 4E-14 1.4E-18 104.0 11.2 128 3-130 90-244 (270)
343 3tv3_L PGT128 light chain, IG 99.6 3.1E-14 1.1E-18 100.6 10.2 111 54-167 6-138 (211)
344 2if7_A SLAM family member 6; N 99.5 1.2E-13 4.3E-18 96.2 13.0 154 56-230 5-182 (193)
345 3fl7_A Ephrin receptor; ATP-bi 99.5 5.6E-14 1.9E-18 111.5 12.4 215 17-244 301-535 (536)
346 1f3r_B FV antibody fragment; I 99.5 7.1E-13 2.4E-17 96.6 17.1 167 58-227 9-232 (257)
347 3d85_D IL-12B, interleukin-12 99.5 7.1E-12 2.4E-16 93.4 22.5 108 117-237 185-302 (306)
348 1dr9_A B7-1 (CD80), T lymphocy 99.5 2.2E-13 7.6E-18 95.5 13.5 164 58-230 3-191 (201)
349 1he7_A High affinity nerve gro 99.5 2.1E-13 7E-18 87.1 11.9 82 62-143 13-101 (126)
350 3s96_B 3B5H10 FAB light chain; 99.5 1.2E-13 4.1E-18 98.1 12.1 115 51-166 3-147 (218)
351 2lvc_A Obscurin-like protein 1 99.5 2.3E-14 8E-19 86.9 7.2 79 49-128 4-84 (91)
352 2lu7_A Obscurin-like protein 1 99.5 5.4E-14 1.8E-18 83.9 8.5 71 57-128 4-74 (84)
353 1bqu_A Protein (GP130); cytoki 99.5 3E-12 1E-16 90.7 18.8 132 105-244 62-207 (215)
354 1x9q_A SCFV, 4M5.3 anti-fluore 99.5 1.4E-12 4.7E-17 95.7 17.4 178 49-226 15-254 (268)
355 2crz_A Fibronectin type-III do 99.5 1.1E-13 3.9E-18 87.3 10.0 96 140-245 8-106 (110)
356 2xzc_L FAB A.17 light chain; i 99.5 3.4E-13 1.1E-17 95.7 13.5 172 56-230 7-205 (216)
357 3qib_D 2B4 beta chain; IG doma 99.5 9.7E-14 3.3E-18 101.9 10.9 141 18-166 3-175 (270)
358 2wqr_A IG epsilon chain C regi 99.5 3.9E-14 1.3E-18 106.8 8.9 119 11-130 178-309 (323)
359 3pv7_A B7-H6, IG-like domain-c 99.5 9E-13 3.1E-17 95.5 15.7 176 56-235 10-219 (248)
360 2wbj_D OB TCR; transmembrane, 99.5 1.8E-13 6.3E-18 100.9 12.1 129 2-130 88-245 (279)
361 2db8_A Tripartite motif protei 99.5 9.4E-14 3.2E-18 87.6 9.0 94 141-244 10-105 (110)
362 3uzq_A Anti-dengue MAB 4E11; d 99.5 4.6E-12 1.6E-16 92.0 19.3 173 55-228 7-231 (253)
363 3gkz_A Anti-methamphetamine si 99.5 7.8E-12 2.7E-16 91.0 20.5 170 56-227 15-235 (257)
364 3bqu_C 3H6 FAB light chain; be 99.5 2.5E-14 8.4E-19 102.7 7.0 180 50-230 24-225 (233)
365 3l5i_A Interleukin-6 receptor 99.5 7.8E-12 2.7E-16 92.6 20.7 214 14-242 64-290 (290)
366 2cr6_A KIAA1556 protein, obscu 99.5 1.6E-14 5.3E-19 92.1 5.2 101 42-146 5-107 (115)
367 3juy_B 3B3 single chain varian 99.5 2.4E-12 8.1E-17 93.7 17.4 177 49-227 6-243 (256)
368 3caf_A Fibroblast growth facto 99.5 6.8E-14 2.3E-18 86.8 7.9 83 57-139 16-99 (100)
369 2eo9_A Roundabout homolog 1; b 99.5 1.2E-13 4E-18 88.4 9.2 90 48-140 7-97 (118)
370 2q7n_A Leukemia inhibitory fac 99.5 2.6E-13 9E-18 106.8 12.6 166 50-231 204-374 (488)
371 3tv3_H PGT128 heavy chain, IG 99.5 8.5E-14 2.9E-18 100.4 8.9 135 2-137 73-233 (239)
372 3n9g_H FAB fragment of MAB CR4 99.5 4.1E-13 1.4E-17 96.2 12.3 136 2-140 66-224 (230)
373 4dzb_B Vbeta2 (MAIT T cell rec 99.5 9.7E-13 3.3E-17 95.2 14.4 118 52-169 4-154 (246)
374 2yuv_A Myosin-binding protein 99.5 6.6E-13 2.3E-17 82.2 11.7 88 49-141 7-95 (100)
375 2dm7_A KIAA1556 protein; beta- 99.5 1.9E-13 6.6E-18 85.9 9.2 96 48-149 7-102 (108)
376 2j6e_L IGM, FAB light chain; a 99.5 2.3E-13 7.9E-18 97.7 10.8 172 56-229 26-224 (234)
377 1bec_A 14.3.D T cell antigen r 99.5 3.3E-13 1.1E-17 97.2 11.6 127 2-128 60-210 (238)
378 1ypz_F T-cell receptor gamma c 99.5 1.2E-13 3.9E-18 99.1 9.1 127 2-130 66-216 (230)
379 2dlt_A Myosin binding protein 99.5 1.2E-13 4.2E-18 86.6 8.1 89 49-138 8-96 (106)
380 3umt_A SCFV heavy chain and li 99.5 4.5E-12 1.6E-16 92.2 17.6 168 58-228 11-232 (256)
381 3cx2_A Myosin-binding protein 99.5 6.8E-13 2.3E-17 83.4 11.5 92 49-140 4-107 (108)
382 3u2s_H PG9 heavy chain; greek 99.5 3.2E-13 1.1E-17 97.9 11.1 130 2-137 65-234 (248)
383 4i0k_A CD276 antigen; immunogl 99.5 2.8E-14 9.4E-19 101.7 5.4 176 58-242 4-208 (222)
384 1hnf_A CD2; T lymphocyte adhes 99.5 5.3E-13 1.8E-17 91.9 11.4 153 57-236 7-177 (182)
385 3to4_D NKT vbeta2 (mouse varia 99.5 5.2E-13 1.8E-17 97.1 11.9 126 3-128 65-217 (253)
386 3omz_A Human vdelta1 gamma del 99.5 1.2E-12 4E-17 95.6 13.7 176 50-226 3-231 (259)
387 2dav_A SLOW MYBP-C, myosin-bin 99.5 1.1E-13 3.9E-18 88.3 7.3 92 50-141 8-111 (126)
388 2edk_A Myosin-binding protein 99.5 5.8E-14 2E-18 87.2 5.8 77 49-126 8-88 (101)
389 2dju_A Receptor-type tyrosine- 99.5 3.8E-13 1.3E-17 84.3 9.6 96 140-245 7-102 (106)
390 3l5h_A Interleukin-6 receptor 99.5 2.5E-13 8.6E-18 110.5 11.0 214 10-244 63-302 (589)
391 3bfo_A Mucosa-associated lymph 99.5 8E-13 2.7E-17 80.3 10.7 82 49-139 3-85 (91)
392 2eny_A Obscurin; beta-sandwich 99.5 1.1E-13 3.9E-18 86.3 7.0 78 49-126 8-86 (104)
393 1oga_E TRBC1, T-cell receptor 99.5 7.6E-13 2.6E-17 96.2 12.2 129 2-130 64-218 (252)
394 3t1w_A Four-domain fibronectin 99.5 1.4E-10 4.9E-15 89.0 25.5 218 9-244 57-280 (375)
395 1c1e_H Catalytic antibody 1E9 99.5 1.1E-12 3.8E-17 93.2 12.7 111 56-166 7-150 (219)
396 2cr3_A Basic fibroblast growth 99.5 3.4E-13 1.1E-17 83.4 8.6 84 56-144 10-93 (99)
397 1gsm_A Madcam-1, mucosal addre 99.5 1.1E-11 3.8E-16 86.6 17.1 115 58-181 16-138 (210)
398 2e7b_A Obscurin; IG-like domai 99.5 2.3E-13 7.8E-18 84.8 7.8 74 49-123 8-81 (103)
399 3eow_R Poliovirus receptor; im 99.5 2.3E-13 8E-18 96.8 8.8 177 58-242 8-212 (221)
400 2crm_A Fibronectin type-III do 99.5 4.4E-13 1.5E-17 86.0 9.2 97 140-245 17-116 (120)
401 1ccz_A Protein (CD58); LFA-3, 99.5 1.2E-12 4E-17 89.4 11.8 150 58-234 4-165 (171)
402 2cpc_A KIAA0657 protein; immun 99.5 1.4E-12 4.9E-17 82.6 11.4 80 46-126 7-89 (113)
403 2dku_A KIAA1556 protein; beta- 99.5 1E-12 3.5E-17 81.8 10.5 93 49-144 8-100 (103)
404 1hxm_B Gamma-delta T-cell rece 99.5 3.9E-11 1.3E-15 86.5 20.4 182 52-238 4-227 (242)
405 1wfu_A Unnamed protein product 99.5 1.9E-13 6.3E-18 87.0 7.1 83 152-244 26-115 (120)
406 1qok_A MFE-23 recombinant anti 99.5 4.2E-12 1.4E-16 93.8 15.5 169 56-227 33-254 (282)
407 1sy6_A T-cell surface glycopro 99.5 2E-13 6.9E-18 96.0 8.0 155 61-238 15-200 (204)
408 2pet_A Lutheran blood group gl 99.5 7.8E-13 2.7E-17 94.6 11.1 122 56-180 7-158 (231)
409 1v5j_A KIAA1355 protein, RSGI 99.5 1.8E-13 6.2E-18 85.3 6.7 81 154-243 19-102 (108)
410 1nfd_E H57 FAB; complex (immun 99.5 2.8E-13 9.7E-18 95.7 8.5 170 56-229 6-201 (212)
411 2k1m_A Myosin-binding protein 99.4 9.3E-13 3.2E-17 80.7 9.7 74 50-124 9-82 (95)
412 1i1c_A IGG2A, IG gamma-2A chai 99.4 7E-14 2.4E-18 100.7 5.3 119 11-129 82-210 (239)
413 3fku_X Neutralizing antibody F 99.4 6.2E-12 2.1E-16 92.8 15.8 171 56-227 7-234 (280)
414 3d9a_H Heavy chain of hyhel10 99.4 1.4E-12 4.8E-17 92.0 11.5 169 57-230 8-204 (210)
415 3m45_A Cell adhesion molecule 99.4 2.1E-12 7.3E-17 81.0 11.1 93 47-140 4-105 (108)
416 3mtr_A N-CAM-1, NCAM-1, neural 99.4 2.7E-13 9.1E-18 96.1 7.6 125 3-134 66-202 (215)
417 1x5x_A Fibronectin type-III do 99.4 7.4E-13 2.5E-17 83.4 8.6 85 152-245 18-105 (109)
418 1cfb_A Drosophila neuroglian; 99.4 3E-11 1E-15 84.9 17.8 129 106-243 64-204 (205)
419 2ibg_A CG9211-PA, GH03927P; IH 99.4 2.2E-11 7.6E-16 86.1 17.0 132 104-243 69-213 (214)
420 2ede_A Netrin receptor DCC; tu 99.4 5.3E-12 1.8E-16 80.1 12.4 84 154-245 23-110 (114)
421 1x3d_A Fibronectin type-III do 99.4 7.9E-13 2.7E-17 84.5 8.6 96 140-245 17-114 (118)
422 2gki_A Nuclease; anti-DNA anti 99.4 1.3E-11 4.4E-16 91.6 16.2 170 56-226 29-257 (291)
423 2w59_A IGY FCU3-4; immunoglobu 99.4 4.6E-13 1.6E-17 96.0 8.1 118 11-129 77-216 (231)
424 1mju_H Immunoglobulin MS6-12; 99.4 1.6E-12 5.6E-17 92.9 10.9 171 56-232 7-209 (227)
425 1wis_A KIAA1514 protein; FNIII 99.4 1.1E-12 3.6E-17 84.6 8.9 98 140-245 17-121 (124)
426 3so5_A LIG-3, leucine-rich rep 99.4 5.9E-12 2E-16 79.4 12.3 92 47-138 8-110 (112)
427 1x4z_A Biregional cell adhesio 99.4 2.4E-12 8.1E-17 82.6 10.5 98 140-245 17-118 (121)
428 3iu4_H CHP3 FAB heavy chain; a 99.4 4.6E-13 1.6E-17 97.9 7.9 129 2-138 65-221 (263)
429 1ujt_A KIAA1568 protein; fibro 99.4 1E-11 3.6E-16 79.0 13.1 86 152-244 26-115 (120)
430 1x4x_A Fibronectin type-III do 99.4 2.8E-12 9.4E-17 80.3 10.2 83 152-245 18-102 (106)
431 4hwu_A Fibroblast growth facto 99.4 2.6E-12 8.8E-17 78.7 9.9 82 56-143 8-89 (95)
432 3sob_H Antibody heavy chain, l 99.4 3.3E-12 1.1E-16 93.0 12.1 134 2-138 89-248 (256)
433 1q9r_B S25-2 FAB (IGG1K) heavy 99.4 1.5E-12 5.2E-17 92.7 10.1 167 58-231 9-214 (222)
434 3nl4_H Antigen binding fragmen 99.4 4E-12 1.4E-16 90.0 12.2 112 56-167 6-147 (215)
435 1ypz_E T cell receptor delta, 99.4 2.5E-12 8.4E-17 90.6 10.9 125 2-131 57-199 (207)
436 2dm4_A Sortilin-related recept 99.4 4.6E-12 1.6E-16 79.6 11.1 94 140-244 7-103 (108)
437 1l6x_A Immunoglobulin gamma-1 99.4 4.2E-13 1.5E-17 94.6 6.9 110 20-129 77-196 (207)
438 2v9t_A Roundabout homolog 1; s 99.4 8.4E-13 2.9E-17 84.3 7.6 87 47-133 7-100 (117)
439 1pd6_A Cardiac MYBP-C;, myosin 99.4 1.7E-12 5.8E-17 80.9 8.7 78 48-126 14-93 (104)
440 1fnf_A Fibronectin; RGD, extra 99.4 7.8E-10 2.7E-14 84.7 25.4 208 9-234 147-359 (368)
441 2fbj_H IGA-kappa J539 FAB (hea 99.4 5.1E-11 1.8E-15 84.7 17.5 170 58-230 9-211 (220)
442 2ed7_A Netrin receptor DCC; tu 99.4 4.6E-12 1.6E-16 81.0 10.9 94 141-243 18-113 (119)
443 1oww_A FN, fibronectin first t 99.4 1E-11 3.6E-16 71.5 10.9 80 153-241 18-97 (98)
444 3nfj_J T cell receptor beta ch 99.4 2E-11 6.8E-16 88.2 15.3 115 53-167 5-151 (245)
445 3mlr_H Human monoclonal anti-H 99.4 1.6E-12 5.5E-17 92.9 9.3 125 2-134 66-219 (226)
446 3r8q_A Fibronectin; heparin, F 99.4 4.7E-10 1.6E-14 83.1 22.9 206 10-232 73-283 (290)
447 1uey_A KIAA0343 protein; immun 99.4 1.8E-12 6.1E-17 84.0 8.7 100 137-245 13-116 (127)
448 1pz5_B Heavy chain of FAB (SYA 99.4 4.3E-12 1.5E-16 90.2 11.4 168 57-229 8-210 (220)
449 1za6_B IGG heavy chain; immuno 99.4 3.6E-12 1.2E-16 96.8 11.5 167 57-229 8-206 (344)
450 2rgs_A I, IG gamma-2B heavy ch 99.4 7.9E-13 2.7E-17 93.9 7.4 118 49-166 9-143 (218)
451 3f8u_B Tapasin; endoplasmic re 99.4 1.1E-11 3.9E-16 94.1 13.9 120 8-128 251-388 (401)
452 2ed8_A Netrin receptor DCC; tu 99.4 5.9E-12 2E-16 78.8 10.4 94 140-245 7-102 (106)
453 4ei6_B Vbeta16 XV19 type II na 99.4 2.2E-11 7.6E-16 88.0 14.9 117 50-167 3-151 (245)
454 1tdq_A Tenascin-R; extracellul 99.4 1.5E-09 5.2E-14 80.0 24.6 208 9-235 66-279 (283)
455 3p4l_A Neogenin; iron homeosta 99.4 6.5E-11 2.2E-15 83.5 16.4 132 104-243 63-205 (211)
456 2e6q_A Obscurin-like protein 1 99.4 1.3E-11 4.4E-16 77.4 11.2 76 49-126 8-93 (112)
457 2edn_A Myosin-binding protein 99.4 3.8E-13 1.3E-17 85.0 4.2 91 50-140 13-115 (118)
458 1bpv_A Titin, A71, connectin; 99.4 9E-13 3.1E-17 83.1 5.9 83 152-242 21-107 (112)
459 2vkw_A Neural cell adhesion mo 99.4 1.1E-11 3.7E-16 87.4 12.2 128 105-242 68-203 (209)
460 1x4y_A Biregional cell adhesio 99.4 9.8E-12 3.4E-16 78.8 10.8 85 152-244 19-109 (114)
461 1dee_B IGM RF 2A2; FAB-IBP com 99.4 1.2E-10 4E-15 83.0 17.5 170 58-230 9-217 (223)
462 1op3_H FAB 2G12, heavy chain; 99.4 1E-11 3.5E-16 88.6 11.9 110 58-167 9-155 (225)
463 1x5y_A Myosin binding protein 99.4 5.2E-12 1.8E-16 79.7 9.2 94 141-243 9-106 (111)
464 2dru_A Chimera of CD48 antigen 99.4 1.9E-11 6.4E-16 84.1 12.6 149 57-232 7-173 (180)
465 2yuw_A Myosin binding protein 99.4 8.6E-12 3E-16 78.6 10.0 94 141-243 8-105 (110)
466 1x5f_A Neogenin; RGM binding, 99.4 1.2E-11 4.1E-16 79.2 10.9 95 140-243 17-114 (120)
467 1fnf_A Fibronectin; RGD, extra 99.4 1.1E-09 3.9E-14 83.7 23.8 216 10-244 57-278 (368)
468 2vol_A Murine IGG FC; FC, zinc 99.4 5.8E-12 2E-16 88.7 10.1 107 61-167 15-136 (207)
469 2ee2_A Contactin-1; neural cel 99.4 1.3E-11 4.3E-16 79.0 10.8 86 152-245 29-115 (119)
470 2ic2_A CG9211-PA, GH03927P; IH 99.4 1.1E-11 3.6E-16 78.6 10.2 98 140-241 5-111 (115)
471 2haz_A N-CAM 1, neural cell ad 99.4 2.7E-12 9.1E-17 80.2 7.3 95 141-242 7-104 (105)
472 1gl4_B Basement membrane-speci 99.3 1.4E-11 4.8E-16 75.9 10.4 79 56-139 17-96 (98)
473 2yrz_A Integrin beta-4; GP150, 99.3 6.2E-12 2.1E-16 80.3 9.1 97 140-245 17-115 (118)
474 2dn7_A Receptor-type tyrosine- 99.3 8.9E-12 3.1E-16 78.1 9.6 82 153-244 18-101 (107)
475 1uem_A KIAA1568 protein; immun 99.3 2.1E-12 7.3E-17 82.3 6.7 97 140-245 15-114 (117)
476 1x5z_A Receptor-type tyrosine- 99.3 4.2E-12 1.4E-16 80.7 8.1 84 152-245 28-111 (115)
477 2aty_A Complement receptor chi 99.3 8.7E-12 3E-16 95.8 11.2 119 11-129 233-361 (376)
478 3bae_H WO2 IGG2A FAB fragment 99.3 1.6E-11 5.4E-16 87.8 11.9 170 57-231 8-217 (228)
479 1iam_A ICAM-1, CD54, intercell 99.3 1.9E-11 6.5E-16 83.6 11.6 113 11-129 50-166 (185)
480 3pl6_D MBP peptide / T-cell re 99.3 3.7E-11 1.3E-15 88.0 14.1 130 50-180 27-186 (268)
481 1x5l_A Ephrin type-A receptor 99.3 1.1E-11 3.7E-16 78.3 9.6 94 140-244 10-106 (111)
482 3q5y_A TCR N15 beta; IG, T cel 99.3 2.6E-11 8.8E-16 87.4 12.8 114 52-166 5-148 (240)
483 1ow0_A IG alpha-1 chain C regi 99.3 4.9E-13 1.7E-17 94.7 3.7 117 11-128 66-198 (214)
484 2gee_A Hypothetical protein; f 99.3 8.9E-10 3E-14 77.2 20.1 124 102-234 74-198 (203)
485 3f7q_A Integrin beta-4, GP150; 99.3 1.3E-10 4.5E-15 83.4 16.1 135 103-245 56-202 (234)
486 2djs_A Ephrin type-B receptor 99.3 4.4E-12 1.5E-16 79.7 7.4 94 141-244 8-103 (108)
487 1wf5_A Sidekick 2 protein; FNI 99.3 3.5E-12 1.2E-16 81.9 7.1 98 139-245 16-118 (121)
488 1dn0_B IGM-kappa cold agglutin 99.3 5.5E-11 1.9E-15 85.2 14.1 177 58-237 9-224 (232)
489 3n1f_C Cell adhesion molecule- 99.3 2.9E-11 9.7E-16 74.9 10.9 82 152-241 15-102 (102)
490 1z9m_A GAPA225; nectin-like, I 99.3 1.1E-11 3.9E-16 82.1 9.7 87 52-140 41-137 (145)
491 3qr2_A Basigin; CD147, EMMPRIN 99.3 5.5E-12 1.9E-16 82.8 7.8 86 46-131 18-116 (137)
492 1zlg_A Anosmin 1; insulin-like 99.3 4.4E-10 1.5E-14 92.9 20.8 133 103-244 221-377 (680)
493 3o3u_N Maltose-binding peripla 99.3 1.2E-11 4.2E-16 100.4 11.5 170 58-231 375-568 (581)
494 3m8o_H Immunoglobulin A1 heavy 99.3 2.3E-10 7.8E-15 81.3 16.8 109 58-166 9-149 (221)
495 3t1w_A Four-domain fibronectin 99.3 2.4E-09 8.3E-14 82.1 23.7 208 9-234 148-361 (375)
496 3uto_A Twitchin; kinase, muscl 99.3 4.4E-11 1.5E-15 96.5 14.2 92 48-139 481-572 (573)
497 3rbg_A Cytotoxic and regulator 99.3 2.3E-11 7.9E-16 78.3 10.3 87 55-142 7-102 (124)
498 2wbj_D OB TCR; transmembrane, 99.3 1.7E-10 5.7E-15 85.0 16.2 120 50-169 25-179 (279)
499 2ed9_A Netrin receptor DCC; tu 99.3 6.7E-12 2.3E-16 80.9 7.6 81 152-242 39-123 (124)
500 3s35_X Vascular endothelial gr 99.3 2.3E-11 8E-16 78.1 10.1 84 58-141 17-110 (122)
No 1
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=100.00 E-value=1.1e-32 Score=213.42 Aligned_cols=231 Identities=25% Similarity=0.355 Sum_probs=188.4
Q ss_pred cceEEEe--ecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCCC
Q psy12131 2 KEIELLY--NRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPPA 79 (245)
Q Consensus 2 ~~~~~~~--~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~ 79 (245)
+|+.+.. +.+.|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|..+|.+...+....+..|+.+.|.|.+.|.|.+
T Consensus 52 ~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~-~~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~ 130 (389)
T 2jll_A 52 GRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGG-HQKSMYLDIEYAPKFISNQTIYYSWEGNPINISCDVKSNPPA 130 (389)
T ss_dssp SSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCE-EEEEEEEEEEEEEEECCSCCEEEECTTCCEEEEECEEEESCC
T ss_pred CeEEEeccCCcceEEEcccChhhCEEEEEEEEeCCCC-cceEEEEEEEeCCEEecCcceEEeccCCEEEEEEEEEecCCC
Confidence 4666654 3457999999999999999999999887 688999999999998777766678899999999999999999
Q ss_pred eEEEEECCEEeccCC--cEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEe--cCCCCccccCccccCC
Q psy12131 80 KVEWFRDGTAITLGG--RIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSG--IPNIPVFQKSSRRLGP 155 (245)
Q Consensus 80 ~~~w~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~--~~~~p~~~~~~~~~~~ 155 (245)
.+.|++++..+.... ++.+...+....|.|.++...|.|.|.|.|.|..|.....+.+.+ .|.+|..... .....
T Consensus 131 ~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~P~~~~~-~~~~~ 209 (389)
T 2jll_A 131 SIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPSSPYGVKI-IELSQ 209 (389)
T ss_dssp EEEEEETTEESSCTTCTTEEEEECSSCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCCCCCEEEEE-EEECS
T ss_pred eEEEEECCccCCcccCceEEEeccCCEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCCCCCcceEE-eeccC
Confidence 999999999887654 566666666788999999999999999999999998877766665 3444433322 23556
Q ss_pred CeeEEEEEe---CCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCC
Q psy12131 156 DGYRLVWQV---DTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRP 232 (245)
Q Consensus 156 ~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~ 232 (245)
..+.|.|.+ .++.|+..|.++|+... ...|..+...... ..+.|.+|.+++.|.|+|.|.|..|.+.+
T Consensus 210 ~~~~l~w~~p~~~~g~pi~~y~v~~~~~~-~~~~~~~~~~~~~--------~~~~i~~l~~~~~y~~~v~A~N~~G~~~~ 280 (389)
T 2jll_A 210 TTAKVSFNKPDSHGGVPIHHYQVDVKEVA-SEIWKIVRSHGVQ--------TMVVLNNLEPNTTYEIRVAAVNGKGQGDY 280 (389)
T ss_dssp SCEEEEEECCSCCTTSCEEEEEEEEEETT-CSCCEEEECSTTC--------SEEEECSCCTTCEEEEEEEEEESSCBCCC
T ss_pred CEEEEEEeCCCCCCCcceEEEEEEEEECC-CcccEEeeccCCc--------ceEEECCccCCCEEEEEEEEEcCCccCCC
Confidence 789999996 33458889999998875 6678765543332 67999999999999999999999999999
Q ss_pred CcceEEecCCC
Q psy12131 233 SKAYVFATEGA 243 (245)
Q Consensus 233 s~~~~~~t~~~ 243 (245)
|..+.+.|.+.
T Consensus 281 s~~~~~~t~~~ 291 (389)
T 2jll_A 281 SKIEIFQTLPV 291 (389)
T ss_dssp CCCEEEECCCC
T ss_pred CcceEEEecCC
Confidence 99998888653
No 2
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=100.00 E-value=6.5e-32 Score=202.51 Aligned_cols=222 Identities=25% Similarity=0.349 Sum_probs=180.5
Q ss_pred ceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeec-----ceEEecCCCeEEEEEEEeecCCCeEEEEE
Q psy12131 11 ESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEK-----QWIHTAPDMRAEIICNVYANPPAKVEWFR 85 (245)
Q Consensus 11 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~-----~~~~~~~g~~~~l~C~~~~~~~~~~~w~~ 85 (245)
..|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|..+|.+..+. ....+..|+.+.|.|.+.+.|.+.+.|++
T Consensus 62 ~~L~i~~v~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~ 140 (305)
T 2nzi_A 62 HQLIIASVTDDDATVYQVRATNQGGS-VSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQK 140 (305)
T ss_dssp EEEEESSCCGGGCSEEEEEEEETTEE-EEEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEE
T ss_pred EEEEEccCChhhCeEEEEEEEcCCCC-ccceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEE
Confidence 37999999999999999999998877 6888899998877764432 34667889999999999999999999999
Q ss_pred CCEEeccCCcEEEEecCceeEEEEcc-CCCCCCeEEEEEEEeCCceeEEEEEEEe--cCCCCccccCccccCCCeeEEEE
Q psy12131 86 DGTAITLGGRIDMHVSSEKHSLLVRH-IKDTDFGNYMCQASNNLGSSQQFIQLSG--IPNIPVFQKSSRRLGPDGYRLVW 162 (245)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~g~y~C~~~n~~g~~~~~~~~~~--~~~~p~~~~~~~~~~~~~~~l~~ 162 (245)
++..+....++.+........|.|.+ +...|.|.|+|.+.|..|.....+.+.+ .|.+|...... ......+.|.|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~p~~~~~~-~~~~~~v~l~w 219 (305)
T 2nzi_A 141 GQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPPRGVKVS-DVSRDSVNLTW 219 (305)
T ss_dssp SSSBCCSSSSCEEEECSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEE-SCCSSCEEEEE
T ss_pred CCEECCCCCcEEEEEcCCceEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCCCCCCceee-eccCCEEEEEE
Confidence 99888877777776666778899999 9999999999999999998877766654 45566554332 35678999999
Q ss_pred Ee---CCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceE-E
Q psy12131 163 QV---DTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYV-F 238 (245)
Q Consensus 163 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~-~ 238 (245)
.+ +++.++..|.++++... ...|........ ..+.|.+|.+++.|.|+|.|.|.+|.+.+|.... +
T Consensus 220 ~~p~~~g~~~i~~y~v~~~~~~-~~~w~~~~~~~~---------~~~~i~~l~~~~~y~~~~~A~N~~G~~~~S~~~~~~ 289 (305)
T 2nzi_A 220 TEPASDGGSKITNYIVEKCATT-AERWLRVGQARE---------TRYTVINLFGKTSYQFRVIAENKFGLSKPSEPSEPT 289 (305)
T ss_dssp ECCSCCSBSCEEEEEEEEEETT-SCCEEEEEEESS---------SEEEECSCCSSCEEEEEEEEEETTEECCCCCCCCCE
T ss_pred cCCccCCCCceeEEEEEEecCC-CCccEECccccC---------ceEEecCCCCCCeEEEEEEEEeCCcccCCcCCCCCE
Confidence 97 34568899999998875 678987655432 6799999999999999999999999999998655 4
Q ss_pred ecCCCC
Q psy12131 239 ATEGAE 244 (245)
Q Consensus 239 ~t~~~~ 244 (245)
++.+.+
T Consensus 290 ~t~~~~ 295 (305)
T 2nzi_A 290 ITKEDK 295 (305)
T ss_dssp ECCC--
T ss_pred EcCCcc
Confidence 444433
No 3
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.97 E-value=6.3e-29 Score=201.18 Aligned_cols=220 Identities=18% Similarity=0.261 Sum_probs=173.2
Q ss_pred EeecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEEC
Q psy12131 7 LYNRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRD 86 (245)
Q Consensus 7 ~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~ 86 (245)
..+...|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|..+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|+++
T Consensus 343 ~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~-~~~~~~l~V~~~P~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~v~W~k~ 421 (570)
T 3b43_A 343 VESVAVLEMYNLSVEDSGDYTCEAHNAAGS-ASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKD 421 (570)
T ss_dssp ETTEEEEEEESCCGGGCEEEEEEEEBTTBC-CEEEEEECEECCCEECSCCCCEEECTTCCEEEEEEEESSSSCCCEEEET
T ss_pred ECCEEEEEECCCCcccCEEEEEEEEeCCCE-EEEEEEEEecCCCeeecCCCceeecCCCEEEEEEEEecCCCCEEEEEEC
Confidence 334466999999999999999999999988 6788899999999988888778888999999999999999999999999
Q ss_pred CEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEecCCCCccccC---ccccCCCeeEEEEE
Q psy12131 87 GTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIPNIPVFQKS---SRRLGPDGYRLVWQ 163 (245)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~~~p~~~~~---~~~~~~~~~~l~~~ 163 (245)
+..+..+.++.+...+....|.|.++..+|.|.|.|.|.|..|.......+.+.. ||.+... .....++.+.|.|.
T Consensus 422 g~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~~-~P~~~~~~~~~~~~~g~~~~l~c~ 500 (570)
T 3b43_A 422 KRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLKA-PPRFVKKLSDISTVVGEEVQLQAT 500 (570)
T ss_dssp TEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECC-CCEEEECCCCBCCBTTCCEEEEEE
T ss_pred CEECcCCCCEEEEEcCCEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEecc-CCcccccCCCceecCCCeEEEEEE
Confidence 9999888888777666677899999999999999999999999988877777653 4444332 23467889999999
Q ss_pred eCCCCCceEEEEEEEeec---CCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceEE
Q psy12131 164 VDTYSGIIQYLLKFRERE---ELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYVF 238 (245)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~ 238 (245)
+.+.+++. ..|+++.+ .......+.... ....+.|..+...+.+.|.|.|.|.+|....+..|.|
T Consensus 501 ~~g~p~~~--v~W~k~~~~~~~~~~~~~~~~~~--------~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~a~L~V 568 (570)
T 3b43_A 501 IEGAEPIS--VAWFKDKGEIVRESDNIWISYSE--------NIATLQFSRAEPANAGKYTCQIKNEAGTQECFATLSV 568 (570)
T ss_dssp EESCSSCC--CEEEETTEECCCCTTTEEECCCS--------SEEEEEESSCCTTCCEEEEEEEECSSCEEEEEEEECC
T ss_pred EecCCCCE--EEEEeCCeEeccCCCeEEEEECC--------CEEEEEECcCCHHHCEEEEEEEEECCcEEEEEEEEEE
Confidence 97765432 22444421 111111111111 1267889999999999999999999999887776654
No 4
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.97 E-value=6.1e-28 Score=179.10 Aligned_cols=223 Identities=22% Similarity=0.250 Sum_probs=168.7
Q ss_pred EEEeecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeec-ceEEecCCCeEEEEEEEeecCCCeEEE
Q psy12131 5 ELLYNRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEK-QWIHTAPDMRAEIICNVYANPPAKVEW 83 (245)
Q Consensus 5 ~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~-~~~~~~~g~~~~l~C~~~~~~~~~~~w 83 (245)
.+..+...|.|.+++.+|+|.|+|.+.|..|. .+..+.|.|..+|.+.... ....+..|+.+.|.|.+.+.|.+.+.|
T Consensus 55 ~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~-~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W 133 (284)
T 2rik_A 55 TLVENTATLTVLKVTKGDAGQYTCYASNVAGK-DSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLW 133 (284)
T ss_dssp EEETTEEEEEESSCCGGGCEEEEEEEEETTEE-EEEEEEEEEECCCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEE
T ss_pred EEcCCEEEEEEecCCcccCEEEEEEEEECCce-EEEEEEEEccCCCcccccCCCceEecCCceEEEEEEEeeeCCCEEEE
Confidence 33445577999999999999999999998877 6888999999999876653 345678999999999999999999999
Q ss_pred EECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEecCCCCcccc--CccccCCCeeEEE
Q psy12131 84 FRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIPNIPVFQK--SSRRLGPDGYRLV 161 (245)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~~~p~~~~--~~~~~~~~~~~l~ 161 (245)
++++..+.....+.+........|.|.++..+|.|.|+|.+.|..|.....+.+.+...|..... ......+..+.|.
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~ 213 (284)
T 2rik_A 134 YKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLE 213 (284)
T ss_dssp EETTEECCCSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCBCCSCCCCEEECTTCCEEEE
T ss_pred EECCEECcCCCcEEEEEcCCEEEEEECCCCcccCEEEEEEEEcCCCceeEEEEEEEecCCcceeCCCcceecCCCeEEEE
Confidence 99999988777777666666789999999999999999999999998888777776543322111 1234678899999
Q ss_pred EEeCCCCCceEEEEEEEeec---CCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceEE
Q psy12131 162 WQVDTYSGIIQYLLKFRERE---ELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYVF 238 (245)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~ 238 (245)
|.+.+.++. .+ .|+++.. ....+. +.... ....+.|.++...+.+.|+|.|.|..|....+..+.+
T Consensus 214 C~~~g~p~~-~v-~W~~~~~~~~~~~~~~-~~~~~--------~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 282 (284)
T 2rik_A 214 CELQGTPPF-QV-SWHKDKRELRSGKKYK-IMSEN--------FLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITL 282 (284)
T ss_dssp EECBSSSCC-EE-EEEETTEEECBTTTEE-EEEET--------TEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEecCCC-EE-EEEECCEECcCCCCEE-EEEcC--------CEEEEEEcCCCcccCEEEEEEEEeCCCceeEEEEEEE
Confidence 999776543 23 2444432 112221 11111 1257889999999999999999999998766655554
Q ss_pred e
Q psy12131 239 A 239 (245)
Q Consensus 239 ~ 239 (245)
+
T Consensus 283 ~ 283 (284)
T 2rik_A 283 K 283 (284)
T ss_dssp C
T ss_pred c
Confidence 3
No 5
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.96 E-value=1.5e-27 Score=193.21 Aligned_cols=223 Identities=22% Similarity=0.265 Sum_probs=168.4
Q ss_pred EEEeecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeec-ceEEecCCCeEEEEEEEeecCCCeEEE
Q psy12131 5 ELLYNRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEK-QWIHTAPDMRAEIICNVYANPPAKVEW 83 (245)
Q Consensus 5 ~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~-~~~~~~~g~~~~l~C~~~~~~~~~~~w 83 (245)
.+..+...|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|..+|.+.... ....+..|+.+.|.|.+.|.|.|.+.|
T Consensus 247 ~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~-~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W 325 (570)
T 3b43_A 247 TLVENTATLTVLKVTKGDAGQYTCYASNVAGK-DSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLW 325 (570)
T ss_dssp EEETTEEEEEESSBCGGGCEEEEEEEEETTEE-EEEEEEECCBCCCEEEECCCSBCCEESSCEEEEEEEEESSSSCEEEE
T ss_pred EEECCEEEEEEcccCcccCEEEEEEEECCCCc-EEEEEEEEeecCCcccccCCCccEEcCCCcEEEEEEEeeCCCCEEEE
Confidence 33444567999999999999999999999887 6888999999999876553 234467899999999999999999999
Q ss_pred EECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEecCCCCccccC---ccccCCCeeEE
Q psy12131 84 FRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIPNIPVFQKS---SRRLGPDGYRL 160 (245)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~~~p~~~~~---~~~~~~~~~~l 160 (245)
++++..+....++.+........|.|.++..+|.|.|+|.|.|..|.......|.+.. +|.+... .....+..+.|
T Consensus 326 ~k~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~-~P~~~~~~~~~~~~~G~~v~l 404 (570)
T 3b43_A 326 YKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKE-PPVFRKKPHPVETLKGADVHL 404 (570)
T ss_dssp EETTEECCCSSSEEEEEETTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEECEEC-CCEECSCCCCEEECTTCCEEE
T ss_pred eECCEECCCCCcEEEEEECCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEEEEecC-CCeeecCCCceeecCCCEEEE
Confidence 9999998877777766556677899999999999999999999999888777777653 3333222 23467889999
Q ss_pred EEEeCCCCCceEEEEEEEeec---CCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceE
Q psy12131 161 VWQVDTYSGIIQYLLKFRERE---ELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYV 237 (245)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~ 237 (245)
.|.+.+.++.. + .|+++.. .+..+ .+..... ...+.|.++...+.+.|+|.|.|.+|....+..+.
T Consensus 405 ~C~~~g~P~p~-v-~W~k~g~~l~~~~~~-~~~~~~~--------~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~ 473 (570)
T 3b43_A 405 ECELQGTPPFQ-V-SWHKDKRELRSGKKY-KIMSENF--------LTSIHILNVDSADIGEYQCKASNDVGSDTCVGSIT 473 (570)
T ss_dssp EEEEESSSSCC-C-EEEETTEECCSSSSE-EEEEETT--------EEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEE
T ss_pred EEEEecCCCCE-E-EEEECCEECcCCCCE-EEEEcCC--------EEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEE
Confidence 99997765432 2 2444432 11222 1211111 25688999999999999999999999876655555
Q ss_pred Eec
Q psy12131 238 FAT 240 (245)
Q Consensus 238 ~~t 240 (245)
+..
T Consensus 474 v~~ 476 (570)
T 3b43_A 474 LKA 476 (570)
T ss_dssp ECC
T ss_pred ecc
Confidence 543
No 6
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.95 E-value=1.8e-26 Score=164.48 Aligned_cols=188 Identities=24% Similarity=0.356 Sum_probs=147.8
Q ss_pred cCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccC--CcEEEEecCceeEEEEccCCCCCCeEEEEEEE
Q psy12131 48 YPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLG--GRIDMHVSSEKHSLLVRHIKDTDFGNYMCQAS 125 (245)
Q Consensus 48 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 125 (245)
.+|.+ ..+....+..|+.+.|.|.+.|.|.|.+.|++++..+... .++.+........|.|.++...|.|.|.|.+.
T Consensus 18 ~~P~~-~~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 96 (215)
T 3mtr_A 18 YAPKL-QGPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAV 96 (215)
T ss_dssp EEEEE-ECCSEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEE
T ss_pred cCCcc-cCCceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEEE
Confidence 45666 4555678899999999999999999999999999988765 45666655567899999999999999999999
Q ss_pred eCCceeEEEEEEEec--CCCCccccCccccCCCeeEEEEEe---CCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcc
Q psy12131 126 NNLGSSQQFIQLSGI--PNIPVFQKSSRRLGPDGYRLVWQV---DTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGP 200 (245)
Q Consensus 126 n~~g~~~~~~~~~~~--~~~p~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (245)
|..|.....+.+.+. |.+|..... .....++.|.|.. +++.|+..|.++|+... ...|......... .
T Consensus 97 n~~g~~~~~~~l~v~~~P~~p~~~~~--~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~-~~~w~~~~~~~~~----~ 169 (215)
T 3mtr_A 97 NRIGQESLEFILVQADTPSSPSIDQV--EPYSSTAQVQFDEPEATGGVPILKYKAEWRAVG-EEVWHSKWYDAKE----A 169 (215)
T ss_dssp CSSCEEEEEEEEEECCCCCCCEEEEE--EEETTEEEEEEECCSCCCSSCEEEEEEEEEETT-CCCCEEEEEEHHH----H
T ss_pred ECCCceEEEEEEEECCCCCCCcceEE--EEecceEEEEEecCCccCCCceEEEEEEEEECC-CCccccccccccc----c
Confidence 999988877777664 444543332 3456789999986 34568899999999876 5578755321110 0
Q ss_pred eeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceEEecCCC
Q psy12131 201 IYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYVFATEGA 243 (245)
Q Consensus 201 ~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~~t~~~ 243 (245)
.....+.|.+|.+++.|.|+|.|.|.+|.|.+|..+.++|.+.
T Consensus 170 ~~~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p~ 212 (215)
T 3mtr_A 170 SMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPV 212 (215)
T ss_dssp HHHTEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC-
T ss_pred cccccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEeccc
Confidence 0115789999999999999999999999999999999999875
No 7
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.95 E-value=2.2e-26 Score=171.31 Aligned_cols=226 Identities=13% Similarity=0.171 Sum_probs=156.7
Q ss_pred cceEEEeec--ceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCCC
Q psy12131 2 KEIELLYNR--ESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPPA 79 (245)
Q Consensus 2 ~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~ 79 (245)
.|+.+..++ ..|.|.+++.+|+|.|+|.+.+..|...+..+.|.|..+|.+...+....+.+|+.+.|.|.+.+.|.+
T Consensus 49 ~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~ 128 (291)
T 2wim_A 49 QRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAP 128 (291)
T ss_dssp TTEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSSCEEEEEEEEEEECCCBCCSCCCSEEEETTSCEEECCCCBCSSCC
T ss_pred CcEEEecCCCEEEEEEccCCcccCEEEEEEEecccCceEEEEEEEEecCCcceEeCCCChhhcCCCCEEEEEEEccCCCC
Confidence 355555544 569999999999999999999988875567888999888887777767778899999999999999999
Q ss_pred eEEEEECCEEecc--CCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCcee--EEEEEEEecCCCCcccc----Ccc
Q psy12131 80 KVEWFRDGTAITL--GGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSS--QQFIQLSGIPNIPVFQK----SSR 151 (245)
Q Consensus 80 ~~~w~~~~~~~~~--~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~--~~~~~~~~~~~~p~~~~----~~~ 151 (245)
.+.|++++..+.. ..++.+.. ...|.|.++...|.|.|+|.+.|..+.. ...+.+.+...|..... ...
T Consensus 129 ~v~W~~~~~~~~~~~~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~ 205 (291)
T 2wim_A 129 AVSWLYHNEEVTTISDNRFAMLA---NNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNAT 205 (291)
T ss_dssp EEEEECC----CBCCCSSEEECT---TSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCCCBCSCSEEECC
T ss_pred EEEEEECCccccccCCceEEEcc---CCCEEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEeccCCccccCcccccce
Confidence 9999999877654 23333322 3479999999999999999999987432 23344443322222111 123
Q ss_pred ccCCCeeEEEEEeCCCCCceEEEEEEEeec--CCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCC
Q psy12131 152 RLGPDGYRLVWQVDTYSGIIQYLLKFRERE--ELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGW 229 (245)
Q Consensus 152 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~ 229 (245)
...++.+.|.|.+.+.++. . ..|+++.. ....... ..... ..+.|.++...+.+.|+|.|.|.+|.
T Consensus 206 ~~~g~~~~l~C~~~g~p~p-~-v~W~~~g~~~~~~~~~~--~~~~~--------~~L~i~~~~~~d~G~Y~C~a~N~~G~ 273 (291)
T 2wim_A 206 AERGEEMTFSCRASGSPEP-A-ISWFRNGKLIEENEKYI--LKGSN--------TELTVRNIINSDGGPYVCRATNKAGE 273 (291)
T ss_dssp SSSCCEEEEECBCCCBSCC-E-EEEEETTEECCCTTTEE--ECSTT--------CEEEEESCCSTTCEEEEEEEEETTEE
T ss_pred ecCCCeEEEEEEeecCCCC-e-EEEEECCEECcCCccEE--EcCCc--------cEEEEeeCCcccCEEEEEEEEECCCc
Confidence 4678899999999766443 2 33555433 1111111 11111 56888899888999999999999999
Q ss_pred CCCCcceEEecCC
Q psy12131 230 SRPSKAYVFATEG 242 (245)
Q Consensus 230 ~~~s~~~~~~t~~ 242 (245)
...+..+.+...+
T Consensus 274 ~~~~~~l~v~~~~ 286 (291)
T 2wim_A 274 DEKQAFLQVFVQH 286 (291)
T ss_dssp EEEEEEEEC----
T ss_pred eeeeEEEEEEEec
Confidence 8888877776654
No 8
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.95 E-value=6.2e-26 Score=168.84 Aligned_cols=216 Identities=19% Similarity=0.237 Sum_probs=154.6
Q ss_pred cceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEE
Q psy12131 10 RESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTA 89 (245)
Q Consensus 10 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~ 89 (245)
...|.|.+++.+|+|.|+|.+.+..|...+..+.|.|..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..
T Consensus 61 ~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~ 140 (291)
T 1qz1_A 61 SSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRD 140 (291)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECTTSCEEEEEEEEEEECCSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSC
T ss_pred eEEEEEecCCCCCCEEEEEEEEcCCCCeeEEEEEEEeeccccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEE
Confidence 46799999999999999999999887656788999999999988888778889999999999999999999999999877
Q ss_pred eccCC--cEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCce--eEEEEEEEecCCCCcccc-----CccccCCCeeEE
Q psy12131 90 ITLGG--RIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGS--SQQFIQLSGIPNIPVFQK-----SSRRLGPDGYRL 160 (245)
Q Consensus 90 ~~~~~--~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~--~~~~~~~~~~~~~p~~~~-----~~~~~~~~~~~l 160 (245)
+.... ++... ....|.|.++...|.|.|+|.+.|..+. ....+.+.+.. +|.+.. ......+..+.|
T Consensus 141 ~~~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~-~p~~~~~~~~~~~~~~~g~~v~l 216 (291)
T 1qz1_A 141 VILKKDVRFIVL---SNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNV-PPTVQARQSIVNATANLGQSVTL 216 (291)
T ss_dssp SSTTCCTTEEEC---TTSCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEE-EEEEEESCSEEEEETTSCCCEEE
T ss_pred cccCCCceEEEc---cCCcEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEec-CCcccccccccccccccCceEEE
Confidence 65432 33322 2347999999999999999999987533 22344444332 222211 123467889999
Q ss_pred EEEeCCCCCceEEEEEEEeec--CCCC--eEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcce
Q psy12131 161 VWQVDTYSGIIQYLLKFRERE--ELTP--WRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAY 236 (245)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~ 236 (245)
.|.+.+.++. . ..|+++.. .... .......... ..+.|.++...+.+.|+|.|.|..|....+..+
T Consensus 217 ~C~~~g~p~p-~-i~W~~~g~~~~~~~~~~~~~~~~~~~--------~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l 286 (291)
T 1qz1_A 217 VCDADGFPEP-T-MSWTKDGEPIENEEEDDEKHIFSDDS--------SELTIRNVDKNDEAEYVCIAENKAGEQDASIHL 286 (291)
T ss_dssp EEEEEEESCC-E-EEEEETTEECCCC--CCSSEEECTTS--------CEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEeCCC-c-EEEEECCEECcCCCCCCcceEEcCCC--------cEEEEEecChhcCEEEEEEEEeCCCceEEEEEE
Confidence 9999765443 2 23444433 1110 0011111111 568899999999999999999999987665555
Q ss_pred EEe
Q psy12131 237 VFA 239 (245)
Q Consensus 237 ~~~ 239 (245)
.|.
T Consensus 287 ~V~ 289 (291)
T 1qz1_A 287 KVF 289 (291)
T ss_dssp EEE
T ss_pred EEE
Confidence 553
No 9
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.94 E-value=4.5e-27 Score=177.01 Aligned_cols=228 Identities=16% Similarity=0.154 Sum_probs=160.2
Q ss_pred ceEEEeecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEee-------
Q psy12131 3 EIELLYNRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYA------- 75 (245)
Q Consensus 3 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~------- 75 (245)
++.+..+...|.|.+++.+|+|.|+|.+.|..|. ....+.|.|..+|.+...+....+..|..+.|.|.+.+
T Consensus 53 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~-~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~ 131 (317)
T 2y25_A 53 KHDFKDGICTLLITEFSKKDAGIYEVILKDDRGK-DKSRLKLVDEAFKELMMEVCKKIALSATDLKIQSTAEGIQLYSFV 131 (317)
T ss_dssp C-----CCEEEEETTCCSTTCSCEEEEEESSSCE-EEEEECCSTHHHHHHHHHHHHHHHTCBCCCEEEECSSEEEEEEEB
T ss_pred cEEEECCeEEEEEccCCcccCeEEEEEEECCCCc-EEEEEEEEEecCccccccCCceecccCCCeEEEeeccccEEEEEe
Confidence 4455555678999999999999999999998876 55666666655554433333344567777777777766
Q ss_pred ---cCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEecC-----------
Q psy12131 76 ---NPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIP----------- 141 (245)
Q Consensus 76 ---~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~----------- 141 (245)
.|.+.+.|++++..+....++.+...+....|.|.++..+|.|.|+|.+.|..|.....+.+.+..
T Consensus 132 ~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~ 211 (317)
T 2y25_A 132 TYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRL 211 (317)
T ss_dssp SSCCSSCEEEEEESSSBCCCCSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHH
T ss_pred ccCCCCcEEEEEECCEECCCCCCeEEeccCCEEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhccc
Confidence 688899999999988877777777777778899999999999999999999999888877776421
Q ss_pred --------CCCcccc----CccccCCCeeEEEEEeCCCCCceEEEEEEEeec--CCCCeEEEeeCCCCCCCcceeeeEEE
Q psy12131 142 --------NIPVFQK----SSRRLGPDGYRLVWQVDTYSGIIQYLLKFRERE--ELTPWRNIVIPSDGSLAGPIYTQSYN 207 (245)
Q Consensus 142 --------~~p~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (245)
.+|.+.. ......+..+.|.|.+.+.++.. ..|+++.. .......+..... ....+.
T Consensus 212 ~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~--i~W~~~g~~~~~~~~~~~~~~~~-------~~~~L~ 282 (317)
T 2y25_A 212 KQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPE--VSWLKNEKALASDDHCNLKFEAG-------RTAYFT 282 (317)
T ss_dssp HHHHHHTTTSCEEEEBCCSEEEEETTSBBCEEEEEECSSCCE--EEEEESSSEECCCSSEEECCBTT-------TEEEEE
T ss_pred CCcccCcCCCCcccccCCccEEEEcCCEEEEEEEEecCCCCE--EEEEECCEeCCCCCcEEEEEcCC-------CEEEEE
Confidence 1122111 12356788999999997765442 33555543 1122122221111 125789
Q ss_pred ecCCCCCceEEEEEEEEecCCCCCCCcceEEec
Q psy12131 208 ITGLQLFTQYEASVLAKNRFGWSRPSKAYVFAT 240 (245)
Q Consensus 208 i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~~t 240 (245)
|.++...+.+.|+|.|.|..|....+..+.+..
T Consensus 283 i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 315 (317)
T 2y25_A 283 INGVSTADSGKYGLVVKNKYGSETSDFTVSVFI 315 (317)
T ss_dssp EBSCCSTTCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred ECCCCHHHCEEEEEEEEeCCCeEEEEEEEEEEc
Confidence 999999999999999999999887666666653
No 10
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.94 E-value=1.3e-25 Score=168.26 Aligned_cols=214 Identities=16% Similarity=0.263 Sum_probs=150.8
Q ss_pred ceEEEeccCC-CCCEEEEEEEEcCCCCceeeEEEEEEecC-------CeEEeecceEEecCCCeEEEEEEEeecCCCeEE
Q psy12131 11 ESLDLDRVTL-KLAGLYQCIASNNIGESTSKNFIVNVIYP-------PEVSVEKQWIHTAPDMRAEIICNVYANPPAKVE 82 (245)
Q Consensus 11 ~~L~i~~~~~-~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~-------p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~ 82 (245)
..|.|.+++. +|+|.|+|.|.|..|. .+..+.|.|..+ |.+...+....+..|+.+.|.|.+.|.|.+.+.
T Consensus 63 ~~L~i~~~~~~~D~G~Y~C~a~n~~g~-~~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~ 141 (304)
T 2yd9_A 63 AVLRIQPLRTPRDENVYECVAQNSVGE-ITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEIT 141 (304)
T ss_dssp EEEEECSCCTTTTCSEEEEEEECSSCE-ECCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSCCEEE
T ss_pred eEEEEecccccCCCeEEEEEEECCCCe-EEEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCCCeEE
Confidence 5699999998 9999999999998887 677888888865 667777777778899999999999999999999
Q ss_pred EEECCEEeccCC---cEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeE---EEEEEEecCCCCccccC---cccc
Q psy12131 83 WFRDGTAITLGG---RIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQ---QFIQLSGIPNIPVFQKS---SRRL 153 (245)
Q Consensus 83 w~~~~~~~~~~~---~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~---~~~~~~~~~~~p~~~~~---~~~~ 153 (245)
|++++..+.... ++... ....|.|.++...|.|.|+|.+.|..|... ..+.+.+...+|.+... ....
T Consensus 142 W~k~~~~~~~~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~~~~v~ 218 (304)
T 2yd9_A 142 WFKDFLPVDPSASNGRIKQL---RSGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSILPMSHEIM 218 (304)
T ss_dssp EEETTEECCGGGGTTSEEEC---TTSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEECCCCBCCC
T ss_pred EEECCEECcCCCCcceEEeC---CCeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEecCCceEEc
Confidence 999998876432 22221 234899999999999999999999988755 45555554445544322 2356
Q ss_pred CCCeeEEEEEeCCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCC
Q psy12131 154 GPDGYRLVWQVDTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPS 233 (245)
Q Consensus 154 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s 233 (245)
.++.+.|.|.+.+.++. .+ .|+++.. .+ ..... .......+.+.++.+. +.|+|.|.|..|....+
T Consensus 219 ~G~~v~l~C~~~g~p~p-~v-~W~~~~~------~l--~~~~~--~~~~~~~L~i~~~~d~--G~Y~C~a~N~~G~~~~~ 284 (304)
T 2yd9_A 219 PGGNVNITCVAVGSPMP-YV-KWMQGAE------DL--TPEDD--MPVGRNVLELTDVKDS--ANYTCVAMSSLGVIEAV 284 (304)
T ss_dssp TTCCEEEEEEEEEESCC-EE-EEEETTE------EC--SCSSS--CCBSEEEEEECSCCSC--EEEEEEEEETTEEEEEE
T ss_pred CCCeEEEEEEEeeeCCC-EE-EEEECCE------EC--CCccc--ccCCcEEEEEcccccC--EEEEEEEEeCCCcEEEE
Confidence 78899999999765443 22 3555432 00 00000 0111256777777654 55666699999988776
Q ss_pred cceEEecCC
Q psy12131 234 KAYVFATEG 242 (245)
Q Consensus 234 ~~~~~~t~~ 242 (245)
..+.+...+
T Consensus 285 ~~l~V~~~~ 293 (304)
T 2yd9_A 285 AQITVKSLP 293 (304)
T ss_dssp EEEC-----
T ss_pred EEEEEecCc
Confidence 666665443
No 11
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.94 E-value=2.5e-25 Score=167.11 Aligned_cols=225 Identities=15% Similarity=0.197 Sum_probs=156.9
Q ss_pred cceEEEeec--ceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEec------------CCeEEeecc-eEEecCCCe
Q psy12131 2 KEIELLYNR--ESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIY------------PPEVSVEKQ-WIHTAPDMR 66 (245)
Q Consensus 2 ~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~------------~p~~~~~~~-~~~~~~g~~ 66 (245)
.|+.+...+ ..|.|.+++.+|+|.|+|.+.|..|.. ..+.|.|.. +|.+...+. ...+.+|+.
T Consensus 47 ~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~--~s~~l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~ 124 (312)
T 2y23_A 47 PRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIA--SSYLIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQ 124 (312)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCC--EEEEECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSC
T ss_pred CCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcE--EEEEEEEeeeeeeecccccCCCCccccccCCceEEeeCCC
Confidence 466666644 679999999999999999999988753 355566653 666655443 677889999
Q ss_pred EEEEEEEe-ecCCCeEEEEECCEEeccCCcEEEEec--CceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEe----
Q psy12131 67 AEIICNVY-ANPPAKVEWFRDGTAITLGGRIDMHVS--SEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSG---- 139 (245)
Q Consensus 67 ~~l~C~~~-~~~~~~~~w~~~~~~~~~~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~---- 139 (245)
+.|.|.+. +.|.+.+.|++++..+....++.+... .....|.|.++..+|.|.|+|.+.+..+.....+.+..
T Consensus 125 v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~ 204 (312)
T 2y23_A 125 VRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFK 204 (312)
T ss_dssp EEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTEEEEEESCCCGGGCEEEEEEEESSSCEEEEEEEECTHHHH
T ss_pred EEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCEEEEEEccCCcccCEeEEEEEEeCCceEEEEEEEcchhhh
Confidence 99999998 889999999999999887776665543 44567999999999999999999886655555444421
Q ss_pred --------------cCCCCccccC--ccccCCCeeEEEEEeCCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceee
Q psy12131 140 --------------IPNIPVFQKS--SRRLGPDGYRLVWQVDTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYT 203 (245)
Q Consensus 140 --------------~~~~p~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (245)
...+|.+... .....++.+.|.|.+.+.++...+ .|+++.. . +......... ...
T Consensus 205 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v-~W~~~g~----~--~~~~~~~~~~--~~~ 275 (312)
T 2y23_A 205 KLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVANIKKETHI-VWYKDER----E--ISVDEKHDFK--DGI 275 (312)
T ss_dssp HHHHHHHHHHHHHHHHHSSEEEEEEEEEEETTTEEEEEEEEESCCSSCEE-EEEETTE----E--EEEECCC------CE
T ss_pred hhcccccccccchhhccCCceeecceEEEeCCCEEEEEEEEcCCCCCCEE-EEeeCCE----E--CCCCCcEEEE--CCE
Confidence 0112322111 235678999999999776544233 3554432 0 0000000000 112
Q ss_pred eEEEecCCCCCceEEEEEEEEecCCCCCCCcceE
Q psy12131 204 QSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYV 237 (245)
Q Consensus 204 ~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~ 237 (245)
..+.|.++...+.+.|+|.|.|.+|....+..+.
T Consensus 276 ~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~ 309 (312)
T 2y23_A 276 CTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLV 309 (312)
T ss_dssp EEEEECSCSGGGCEEEEEEEESTTCCEEEEEEEC
T ss_pred EEEEECcCCHHHCEEEEEEEEcCCCceeeeeEEE
Confidence 6789999999999999999999999876554443
No 12
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.93 E-value=1.4e-24 Score=163.21 Aligned_cols=219 Identities=15% Similarity=0.165 Sum_probs=150.5
Q ss_pred cceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEe-ecCCCeEEEEECCE
Q psy12131 10 RESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVY-ANPPAKVEWFRDGT 88 (245)
Q Consensus 10 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~-~~~~~~~~w~~~~~ 88 (245)
..+|.|.+++.+|+|.|+|.+.+..+...+..+.|.+..+|.+........+..+..+.+.|.+. +.|.+.+.|++++.
T Consensus 78 ~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~ 157 (313)
T 4fqp_A 78 NASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLG 157 (313)
T ss_dssp BCCEEECSCCGGGCEEEEEEEECSSSCEEEEEEEECCBBCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTC
T ss_pred ceEEEECcCChhhCEEEEEEEeeccCcceeeeeeeeeccCCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCc
Confidence 35699999999999999999976544436777888888889887776666677888899999875 77889999999887
Q ss_pred EeccCCcEEEEecCc---eeEEEEccCCCCCCeEEEEEEEeCCceeEEE--EEEEecCCCCccc----cCccccCCCeeE
Q psy12131 89 AITLGGRIDMHVSSE---KHSLLVRHIKDTDFGNYMCQASNNLGSSQQF--IQLSGIPNIPVFQ----KSSRRLGPDGYR 159 (245)
Q Consensus 89 ~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~--~~~~~~~~~p~~~----~~~~~~~~~~~~ 159 (245)
.+...........+. .+.|.|......|.|.|+|.+.|..+..... +.+.+. .+|.+. .......++.+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~-~~P~v~~~~~~~~~~~~g~~v~ 236 (313)
T 4fqp_A 158 GMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVY-YPPEVSISGYDNNWYLGQNEAT 236 (313)
T ss_dssp CEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBC-EEEEEEEECCCSCEETTCCCEE
T ss_pred cccccceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccc-cCCccccccccceeecCCCeEE
Confidence 665332221111111 2468888888899999999999987654443 333332 233321 112235678899
Q ss_pred EEEEeCCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceEEe
Q psy12131 160 LVWQVDTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYVFA 239 (245)
Q Consensus 160 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~~ 239 (245)
|.|.+.++++...+. |+++.+.-.... . .....|.|.++...+.+.|+|.|.|.+|....+..+.|.
T Consensus 237 l~C~~~g~P~p~~v~-W~~~~~~l~~~~-~-----------~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 303 (313)
T 4fqp_A 237 LTCDARSNPEPTGYN-WSTTMGPLPPFA-V-----------AQGAQLLIRPVDKPINTTLICNVTNALGARQAELTVQVK 303 (313)
T ss_dssp EEEEEEEESCCCEEE-EEETTBSCCTTE-E-----------EETTEEEECCCSSCCEEEEEEEEECSSCEEEEEEEEEEE
T ss_pred EEEEecCCCCCcEEE-EEECCEECCCce-E-----------EeCCEEEECcCChhhCEEEEEEEEeCCCcEEEEEEEEEE
Confidence 999997765443333 555543110100 0 111468899999999999999999999987776667666
Q ss_pred cCC
Q psy12131 240 TEG 242 (245)
Q Consensus 240 t~~ 242 (245)
..|
T Consensus 304 ~~P 306 (313)
T 4fqp_A 304 EGP 306 (313)
T ss_dssp CCC
T ss_pred eCC
Confidence 544
No 13
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.93 E-value=2e-24 Score=167.83 Aligned_cols=214 Identities=18% Similarity=0.257 Sum_probs=155.8
Q ss_pred cceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeE------EeecceEEecCCCeEEEEEEEeecCCCeEEE
Q psy12131 10 RESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEV------SVEKQWIHTAPDMRAEIICNVYANPPAKVEW 83 (245)
Q Consensus 10 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~------~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w 83 (245)
...|.|.+++.+|+|.|+|.+.|..+...+..+.|.|..+|.+ ...+....+.+|+.+.|.|.+.+.|.+.+.|
T Consensus 176 ~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W 255 (403)
T 3laf_A 176 SGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTW 255 (403)
T ss_dssp TSCEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEE
T ss_pred CceEEEcccccccCEEEEEEEEcCCCceeccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEcCCCCCCeEEE
Confidence 4569999999999999999999987765556778888766543 3344556678999999999999999999999
Q ss_pred EECCEEeccCC-cEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEecCCCCcccc---CccccCCCeeE
Q psy12131 84 FRDGTAITLGG-RIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIPNIPVFQK---SSRRLGPDGYR 159 (245)
Q Consensus 84 ~~~~~~~~~~~-~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~~~p~~~~---~~~~~~~~~~~ 159 (245)
++++..+.... .+... ....|.|.++..+|.|.|+|.+.|..|.....+.+.+... |.+.. ......+..+.
T Consensus 256 ~~~~~~~~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~-p~~~~~~~~~~~~~g~~v~ 331 (403)
T 3laf_A 256 LRGEEVIQLRSKKYSLL---GGSNLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVP-PWFLNHPSNLYAYESMDIE 331 (403)
T ss_dssp EETTEECCCSSSSEEEE---TTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEE-EEEEECCCCEECCTTCCEE
T ss_pred EECCeeccCCCceEEEC---CccEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEECC-CcEeecCcceEEecCCeEE
Confidence 99998876543 33222 2347999999999999999999999998877777666432 22211 12346788999
Q ss_pred EEEEeCCCCCceEEEEEEEeec--CCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceE
Q psy12131 160 LVWQVDTYSGIIQYLLKFRERE--ELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYV 237 (245)
Q Consensus 160 l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~ 237 (245)
|.|.+.+.++. .+ .|+++.. .......+. . ...+.|..+...+.+.|+|.|.|..|....+..+.
T Consensus 332 l~C~~~g~p~p-~v-~W~~~g~~~~~~~~~~~~--~---------~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~ 398 (403)
T 3laf_A 332 FECAVSGKPVP-TV-NWMKNGDVVIPSDYFQIV--G---------GSNLRILGVVKSDEGFYQCVAENEAGNAQSSAQLI 398 (403)
T ss_dssp ECCEEEEESCC-EE-EEEETTEECCCSSSEEEE--T---------TTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred EEEEEeeccCC-EE-EEEECCEECCCCCcEEEe--c---------CccEEEeccccccCEEEEEEEEcCCceEEEEEEEE
Confidence 99999765443 22 3444432 111111111 1 14688999999999999999999999887776666
Q ss_pred Eec
Q psy12131 238 FAT 240 (245)
Q Consensus 238 ~~t 240 (245)
+..
T Consensus 399 V~~ 401 (403)
T 3laf_A 399 VPK 401 (403)
T ss_dssp CCC
T ss_pred EeC
Confidence 654
No 14
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.93 E-value=1.3e-24 Score=167.90 Aligned_cols=214 Identities=17% Similarity=0.200 Sum_probs=145.8
Q ss_pred eecceEEEeccCCCCCEEEEEEEEcCCCCce--eeEEEEEEe-------cCCeEEe-ecceEEecCCCeEEEEEEEeecC
Q psy12131 8 YNRESLDLDRVTLKLAGLYQCIASNNIGEST--SKNFIVNVI-------YPPEVSV-EKQWIHTAPDMRAEIICNVYANP 77 (245)
Q Consensus 8 ~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~--~~~~~l~v~-------~~p~~~~-~~~~~~~~~g~~~~l~C~~~~~~ 77 (245)
.....|.|.+++.+|+|.|+|.|.|..+... .....+.+. .+|.+.. .+....+.+|+.+.|.|.+.|.|
T Consensus 154 ~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~P 233 (384)
T 3kld_A 154 QETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNP 233 (384)
T ss_dssp TTTCCEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCEEEEEEEEEES
T ss_pred cCCCcEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeecCCCceEecCCCcEEEEEEEeecC
Confidence 3445699999999999999999999876521 112222222 2344333 24456678999999999999999
Q ss_pred CCeEEEEEC-CEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEecCCCCcc--ccCccccC
Q psy12131 78 PAKVEWFRD-GTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIPNIPVF--QKSSRRLG 154 (245)
Q Consensus 78 ~~~~~w~~~-~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~~~p~~--~~~~~~~~ 154 (245)
.|.+.|+++ +..+..... . ......|.|.++..+|.|.|+|.|.|..|.......+.+...|... ........
T Consensus 234 ~p~i~W~k~~~~~~~~~~~--~--~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~~~~~~~~~v~~ 309 (384)
T 3kld_A 234 VPTILWRRADGKPIARKAR--R--HKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIINDIHVAM 309 (384)
T ss_dssp CCEEEEEETTCCCCCTTCE--E--CTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEECT
T ss_pred CCcEEEEeCCCccccccce--e--cCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCccccCCCceEecC
Confidence 999999984 444443221 1 1234579999999999999999999999987776666654322211 11233467
Q ss_pred CCeeEEEEEeCCCCCceEEEEEEEeec--CCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCC
Q psy12131 155 PDGYRLVWQVDTYSGIIQYLLKFRERE--ELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRP 232 (245)
Q Consensus 155 ~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~ 232 (245)
+..+.|.|.+.+.++. .+ .|+++.. .......+ ....+.|..+...+.+.|+|.|.|.+|....
T Consensus 310 g~~v~l~C~~~g~P~p-~i-~W~k~g~~l~~~~~~~~------------~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~ 375 (384)
T 3kld_A 310 EESVFWECKANGRPKP-TY-RWLKNGDPLLTRDRIQI------------EQGTLNITIVNLSDAGMYQCVAENKHGVIFS 375 (384)
T ss_dssp TCCEEEECEEEEESCC-EE-EEEETTEECCCBTTEEE------------ETTEEEESSCCGGGCEEEEEEEEETTEEEEE
T ss_pred CCCEEEEeECCccCCC-eE-EEEECCEECCCCccEEE------------eCCEEEEeecChhhCEEEEEEEEeCCceEEe
Confidence 8899999999766433 22 2454433 11111111 1136888899999999999999999998877
Q ss_pred CcceEEe
Q psy12131 233 SKAYVFA 239 (245)
Q Consensus 233 s~~~~~~ 239 (245)
+..+.|.
T Consensus 376 ~a~L~V~ 382 (384)
T 3kld_A 376 SAELSVI 382 (384)
T ss_dssp EEEEEEC
T ss_pred ceEEEEe
Confidence 7766654
No 15
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.93 E-value=3.7e-24 Score=159.23 Aligned_cols=220 Identities=14% Similarity=0.142 Sum_probs=152.2
Q ss_pred ecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCC-CeEEEE-EC
Q psy12131 9 NRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPP-AKVEWF-RD 86 (245)
Q Consensus 9 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~~~w~-~~ 86 (245)
.++.|.|.+++.+|+|.|+|.+.| |. +..+.|.|..+|.+...+....+.+|+.+.|.|.+.+ |. +.+.|+ ++
T Consensus 55 ~~~~L~i~~~~~~d~G~Y~C~~~n--g~--~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~ 129 (290)
T 2o26_X 55 KKNEWIQEKAEATRTGTYTCSNSN--GL--TSSIYVFVRDPAKLFLVGLPLFGKEDSDALVRCPLTD-PQVSQYSLIECD 129 (290)
T ss_dssp CSSEEEETTCCGGGCEEEEEEESS--SC--EEEEEEEEECSSCCBCCCCCEEEETTSCEEECCCBSC-CSCEEEEEEETT
T ss_pred CCceEEEeccCHHhCeEEEEEeeC--Cc--cEEEEEEEeCCCcccccccceEEecCCeEEEeCcCCC-CCCceEEEEeCC
Confidence 347899999999999999999999 43 7788899988887766666677889999999999985 77 899995 68
Q ss_pred CEEeccCCcEEEEecCceeEEEEccCCCCCCe-EEEEEEEeCCceeEE-EEEEEec---CCCCccccC---ccccCCCee
Q psy12131 87 GTAITLGGRIDMHVSSEKHSLLVRHIKDTDFG-NYMCQASNNLGSSQQ-FIQLSGI---PNIPVFQKS---SRRLGPDGY 158 (245)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g-~y~C~~~n~~g~~~~-~~~~~~~---~~~p~~~~~---~~~~~~~~~ 158 (245)
+..+....++..... ..|.|.++..+|.| .|+|.+.|..+.... .+.+.+. ..+|.+... .....++.+
T Consensus 130 g~~l~~~~~~~~~~~---~~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v 206 (290)
T 2o26_X 130 GKSLPTDLTFVPNPK---AGITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTF 206 (290)
T ss_dssp SCCCCTTCEEEEETT---TEEEEESCCGGGTTCEEEEEEEETTEEEECCCEEEEEECCCCSCCEEECSCSBCCCCTTCCE
T ss_pred CcCCCCCCceeeCCC---CCEEEecccHHHCCCEEEEEEEECCceEEeEEEEEEEEeCCCCCCccccCCCcceEecCCcE
Confidence 887776655554433 37999999999999 999999998665332 3444433 244544322 345778899
Q ss_pred EEEEEeCCCCCceEEEEEEEeecCC---CCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcc
Q psy12131 159 RLVWQVDTYSGIIQYLLKFREREEL---TPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKA 235 (245)
Q Consensus 159 ~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~ 235 (245)
.|.|.+.+.++...+. |+++.... ............ ........+.|.++...+.+.|+|.|.|..|....+..
T Consensus 207 ~l~C~~~g~p~p~~i~-W~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~~~~ 283 (290)
T 2o26_X 207 TVVCTIKDVSTSVNSM-WLKMNPQPQHIAQVKHNSWHRGD--FNYERQETLTISSARVDDSGVFMCYANNTFGSANVTTT 283 (290)
T ss_dssp EEEEEEEESSTTCEEE-EEEESSSEEECCCEECCEEEEET--TEEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEE
T ss_pred EEEEEEecCCcceeEE-EecCCCCCccceeecccccccCc--eeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcEEEEEE
Confidence 9999997654432233 45553310 000000000000 01122367899999999999999999999998755555
Q ss_pred eEEe
Q psy12131 236 YVFA 239 (245)
Q Consensus 236 ~~~~ 239 (245)
+.+.
T Consensus 284 l~V~ 287 (290)
T 2o26_X 284 LKVV 287 (290)
T ss_dssp ECC-
T ss_pred EEEE
Confidence 5544
No 16
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.93 E-value=1e-25 Score=170.85 Aligned_cols=230 Identities=18% Similarity=0.276 Sum_probs=124.5
Q ss_pred cceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCe----------------------EEee----cceEEecC
Q psy12131 10 RESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPE----------------------VSVE----KQWIHTAP 63 (245)
Q Consensus 10 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~----------------------~~~~----~~~~~~~~ 63 (245)
+..|.|.+++.+|+|.|+|.+.|. |. .+..+.|.|..+|. +..+ .....+..
T Consensus 60 ~~~L~i~~v~~~D~G~Y~C~a~n~-~~-~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~ 137 (334)
T 1ry7_B 60 PQRLQVLNASHEDSGAYSCRQRLT-QR-VLCHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPA 137 (334)
T ss_dssp -------------------------------------------------------------CCCCSCCTTCCCCEEEEET
T ss_pred cceEEEeecccccCEEEEEEEEeC-Ce-EEEEEEEEEeccCccccccccccccccccccCCCCEEeccccccceeEEecC
Confidence 456999999999999999999998 55 56777777775432 2211 12356778
Q ss_pred CCeEEEEEEEeecCCCeEEEEECCEEeccCCcE-EEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEecCC
Q psy12131 64 DMRAEIICNVYANPPAKVEWFRDGTAITLGGRI-DMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIPN 142 (245)
Q Consensus 64 g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~-~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~~ 142 (245)
|+.+.|.|.+.|.|.+.+.|++++..+....+. ..........|.|.++...|.|.|+|.+.|..|.....+.+.+...
T Consensus 138 g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 217 (334)
T 1ry7_B 138 ANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLER 217 (334)
T ss_dssp TCCEEEECCCCCSSCCEEECCBTTBCCCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECC
T ss_pred CCcEEEEEEccCCCCCeEEEEECCEECcccccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecC
Confidence 999999999999999999999999877654322 1112234458999999999999999999999998877777766432
Q ss_pred ---CCccc----cCccccCCCeeEEEEEeCCCCCceEEEEEEEe----ec--C-CCC-eEEEeeCCCCCCCcceeeeEEE
Q psy12131 143 ---IPVFQ----KSSRRLGPDGYRLVWQVDTYSGIIQYLLKFRE----RE--E-LTP-WRNIVIPSDGSLAGPIYTQSYN 207 (245)
Q Consensus 143 ---~p~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~----~~--~-~~~-~~~~~~~~~~~~~~~~~~~~~~ 207 (245)
+|.+. .......++.+.|.|.+.+.++. .+ .|++. .. . ... ...+ ...............+.
T Consensus 218 ~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~p-~v-~W~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~L~ 294 (334)
T 1ry7_B 218 SPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQP-HI-QWLKHVEVNGSKVGPDGTPYVTV-LKTAGANTTDKELEVLS 294 (334)
T ss_dssp CCSSCBCCTTCSCCEEEESSCCEEECCCCBCSSCE-EE-EEEECCCGGGCSBCTTSSBCCCC-CCCSSCSCSCTTCCCEE
T ss_pred CCCCCceEecCCCceEEeCCCCEEEEEEEecCCCC-eE-EEEECCcCCCccccCCCCeeEEE-eecCccccccccccEEE
Confidence 23332 12334678899999999766543 23 35552 11 0 000 0000 00000000001113688
Q ss_pred ecCCCCCceEEEEEEEEecCCCCCCCcceEEecCCCC
Q psy12131 208 ITGLQLFTQYEASVLAKNRFGWSRPSKAYVFATEGAE 244 (245)
Q Consensus 208 i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~~t~~~~ 244 (245)
|.++...+.+.|+|.|.|..|....+..+.+...+++
T Consensus 295 i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~ 331 (334)
T 1ry7_B 295 LHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVLPAEEE 331 (334)
T ss_dssp ECSCCTTSCSEEEEEEEESSCCEEEEEEEEEECSCCC
T ss_pred EccCCHHHCEEEEEEEeCCCCeEEEEEEEEEEECCCC
Confidence 9899888888888899999999888888888776654
No 17
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.93 E-value=5.4e-24 Score=158.20 Aligned_cols=224 Identities=15% Similarity=0.125 Sum_probs=153.5
Q ss_pred EeecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCe-EEeecceEEecCCCeEEEEEEEeecCCCe-EEEE
Q psy12131 7 LYNRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPE-VSVEKQWIHTAPDMRAEIICNVYANPPAK-VEWF 84 (245)
Q Consensus 7 ~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~-~~~~~~~~~~~~g~~~~l~C~~~~~~~~~-~~w~ 84 (245)
..++..|.|.+++.+|+|.|+|.+.+..+. .+..+.|.|..+|. +...+....+.+|+.+.|.|.+.+.+.+. +.|+
T Consensus 47 ~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~ 125 (289)
T 3ejj_X 47 ESPGSTLTTRNATFKNTGTYRCTELEDPMA-GSTTIHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLM 125 (289)
T ss_dssp CSSCCEEEESSCCGGGCEEEEEECCC------CEEEEEEECCSSCSEEESCSEEEEETTSCEEECEEESCGGGGGSEEEE
T ss_pred cCCccEEEEeeeccccCEEEEEEEeccCCc-ceeEEEEEEeCCCcceecccceEEEecCCceEeEEEccCCCcceEEEEE
Confidence 345677999999999999999999988777 68888999998776 45556677888999999999999877665 9998
Q ss_pred E-CCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEE-eCCceeEEEEEEEecC---CCCccccC---ccccCCC
Q psy12131 85 R-DGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQAS-NNLGSSQQFIQLSGIP---NIPVFQKS---SRRLGPD 156 (245)
Q Consensus 85 ~-~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~-n~~g~~~~~~~~~~~~---~~p~~~~~---~~~~~~~ 156 (245)
+ ++..+....++.+... ..|.|.++..+|.|.|+|.+. +..+.....+.+.+.. .+|.+... .....+.
T Consensus 126 ~~~~~~~~~~~~~~~~~~---~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~ 202 (289)
T 3ejj_X 126 REGGRQVLRKTVYFFSPW---RGFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPSKLVRIRGE 202 (289)
T ss_dssp EGGGEECCTTCCEEEETT---TEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEESSCCCCCEEEEESSSEECCSSS
T ss_pred ecCCeecCCCccEEECCC---CCEEEeecccccCEEEEEEEEeCCCccccccEEEEEEECCCCCCeEEecCCceEEEeCC
Confidence 6 6777766666655433 369999999999999999999 4445555555555542 34443322 2235788
Q ss_pred eeEEEEEeCCCCCceEEEEEEEeec-CCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcc
Q psy12131 157 GYRLVWQVDTYSGIIQYLLKFRERE-ELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKA 235 (245)
Q Consensus 157 ~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~ 235 (245)
.+.|.|.+.+..|...+. |+++.. ......... .. ........+.|.++...+.+.|+|.|.|..|....+..
T Consensus 203 ~~~l~C~~~~~~p~~~i~-W~~~~~~~~~~~~~~~-~~----~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~ 276 (289)
T 3ejj_X 203 AAQIVCSATNAEVGFNVI-LKRGDTKLEIPLNSDF-QD----NYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMN 276 (289)
T ss_dssp CEEEEEEEEESSSCCEEE-EEETTEECCCCEEEEE-CS----SSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEE
T ss_pred cEEEEEEeCCCCCceEEE-EEECCEEeeccCCccc-cc----ceEEeeEEEEEEeecccCCEEEEEEEEcCCCCccccEE
Confidence 999999996532332332 444432 111111100 00 11122367899999999999999999999998877766
Q ss_pred eEEec
Q psy12131 236 YVFAT 240 (245)
Q Consensus 236 ~~~~t 240 (245)
+.+.-
T Consensus 277 L~~~~ 281 (289)
T 3ejj_X 277 FQVVE 281 (289)
T ss_dssp EECC-
T ss_pred EEEEe
Confidence 65543
No 18
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.93 E-value=2.9e-23 Score=170.42 Aligned_cols=217 Identities=18% Similarity=0.317 Sum_probs=155.6
Q ss_pred cceEEEeecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeE-EeecceEEecCCCeEEEEEEEeecCCCe
Q psy12131 2 KEIELLYNRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEV-SVEKQWIHTAPDMRAEIICNVYANPPAK 80 (245)
Q Consensus 2 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~-~~~~~~~~~~~g~~~~l~C~~~~~~~~~ 80 (245)
.|+.+..++..|.|.+++.+|+|.|+|.|.|..|...+..+.|.|..+|.. ...+....+..|+.+.|.|.+.|.|.+.
T Consensus 333 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~ 412 (642)
T 1e07_A 333 PRLQLSNDNRTLTLLSVTRNDVGPYECGIQNELSVDHSDPVILNVLYGPDDPTISPSYTYYRPGVNLSLSCHAASNPPAQ 412 (642)
T ss_pred CCEEEeCCCCEEEEeccCcccCeeEEEEEeCCCCCcceeeEEEEEEcCCCCCeecCCceEecCCCcEEEEEEcCccCCCe
Confidence 456666667789999999999999999999998875667788999876654 3345556778999999999999999999
Q ss_pred EEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEE--EEEEec--CCCCccccC--ccccC
Q psy12131 81 VEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQF--IQLSGI--PNIPVFQKS--SRRLG 154 (245)
Q Consensus 81 ~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~--~~~~~~--~~~p~~~~~--~~~~~ 154 (245)
+.|++++..+... ..|.|.++...|.|.|+|.|.|..|..... +.+.+. +.+|.+... .....
T Consensus 413 i~W~~~g~~~~~~-----------~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~~~~~~v~~ 481 (642)
T 1e07_A 413 YSWLIDGNIQQHT-----------QELFISNITEKNSGLYTCQANNSASGHSRTTVKTITVSAELPKPSISSNNSKPVED 481 (642)
T ss_pred EEEEECCEEcCCC-----------ceEEEccCChhhCeEEEEEEEcCCCCCcccceEEEEEeccCCCceEecCCceeecC
Confidence 9999999876532 358999999999999999999998765432 344433 334443322 23457
Q ss_pred CCeeEEEEEeCCCCCceEEEEEEEeec--CCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCC
Q psy12131 155 PDGYRLVWQVDTYSGIIQYLLKFRERE--ELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRP 232 (245)
Q Consensus 155 ~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~ 232 (245)
++.+.|.|.+.+..+ .+. |+++.. .... .+...... ..+.|.++...+.+.|+|.|.|..|....
T Consensus 482 g~~v~l~C~~~~~~~--~i~-W~~~g~~l~~~~--~~~~~~~~--------~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s 548 (642)
T 1e07_A 482 KDAVAFTCEPEAQNT--TYL-WWVNGQSLPVSP--RLQLSNGN--------RTLTLFNVTRNDARAYVCGIQNSVSANRS 548 (642)
T ss_pred CCeEEEEEECCCCCc--EEE-EEECCEeCCCCC--cEEEcCCC--------cEEEEeecChhcCceEEEEeEcCCCCccC
Confidence 889999999974322 332 444433 1111 11111111 46888899988889999999999997543
Q ss_pred -CcceEEecCC
Q psy12131 233 -SKAYVFATEG 242 (245)
Q Consensus 233 -s~~~~~~t~~ 242 (245)
+..+.+...|
T Consensus 549 ~~~~l~V~~~p 559 (642)
T 1e07_A 549 DPVTLDVLYGP 559 (642)
T ss_pred CCEEEEEEeCC
Confidence 4456555433
No 19
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.93 E-value=3.9e-24 Score=171.62 Aligned_cols=234 Identities=14% Similarity=0.105 Sum_probs=160.5
Q ss_pred ceEEEeecceEEEeccCCCCCE-EEEEEEEcCCCCceeeEEEEEEe----cCCeEEeecceEEecCCCeEEEEEEEeecC
Q psy12131 3 EIELLYNRESLDLDRVTLKLAG-LYQCIASNNIGESTSKNFIVNVI----YPPEVSVEKQWIHTAPDMRAEIICNVYANP 77 (245)
Q Consensus 3 ~~~~~~~~~~L~i~~~~~~d~G-~Y~C~~~~~~~~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~ 77 (245)
++.+.. ...|.|.+++.+|+| .|+|.|.|..+...+..+.|.|. .+|.+...+....+.+|+.+.|.|.+.+.|
T Consensus 161 ~~~~~~-~~~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p 239 (524)
T 2ec8_A 161 RFIPDP-KAGIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVS 239 (524)
T ss_dssp EEEEET-TTEEEEESCCGGGTTCEEEEEEC----CCCCCCEECCEECCCCSCCEEECSCSEEEEETTSCEEEEEEEEESS
T ss_pred ceeECC-CccEEEeccchhhCCceEEEEEEECCceEEEEEEEEEEEeCCCCCCcEEecCCcceEEcCCcEEEEEEEecCC
Confidence 344443 446999999999999 99999999876645667888886 688888877777889999999999999998
Q ss_pred CCe-EEEEECCEEe--ccCCcEEEE---ecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEecCCCCcccc---
Q psy12131 78 PAK-VEWFRDGTAI--TLGGRIDMH---VSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIPNIPVFQK--- 148 (245)
Q Consensus 78 ~~~-~~w~~~~~~~--~~~~~~~~~---~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~~~p~~~~--- 148 (245)
.+. +.|++++..+ .......+. .......|.|.++..+|.|.|+|.+.|..|.....+.|.+...|.....
T Consensus 240 ~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~ 319 (524)
T 2ec8_A 240 SSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGFINIFPMI 319 (524)
T ss_dssp TTCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEESSCEEEEEESS
T ss_pred CcEEEEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEeccCceEeecCC
Confidence 886 9999998763 222222221 1123568999999999999999999999998888777777643322211
Q ss_pred --CccccCCCeeEEEEEeCCCCCceEEEEEEEeec-CCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEe
Q psy12131 149 --SSRRLGPDGYRLVWQVDTYSGIIQYLLKFRERE-ELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKN 225 (245)
Q Consensus 149 --~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N 225 (245)
......++.+.|.|.+.+.++...+ .|+++.. ....-......... ........+.|.++...+.+.|+|.|.|
T Consensus 320 ~~~~~v~~G~~v~l~C~~~g~P~p~~v-~W~k~g~~~~~~~~~~~~~~~~--~~~~~~~~L~i~~v~~~d~G~Y~C~a~N 396 (524)
T 2ec8_A 320 NTTVFVNDGENVDLIVEYEAFPKPEHQ-QWIYMNRTFTDKWEDYPKSENE--SNIRYVSELHLTRLKGTEGGTYTFLVSN 396 (524)
T ss_dssp CSEEEECTTCCEEEEEEEEEESCCCEE-EEESSSCBCSSSBCCEESCCSS--SCCEEEEEEEECSCCGGGCEEEEEEEEC
T ss_pred CceEEEcCCCcEEEEEEEeecCCCcEE-EEEECCeeccCCccceeEEccC--CCceeEEEEEEeecCcccCeEEEEEEEe
Confidence 2345778899999999666543322 3555443 11111011111110 0111346799999999999999999999
Q ss_pred cCCCCCCCcceEEec
Q psy12131 226 RFGWSRPSKAYVFAT 240 (245)
Q Consensus 226 ~~G~~~~s~~~~~~t 240 (245)
..|....+..+.+..
T Consensus 397 ~~g~~~~~~~l~V~~ 411 (524)
T 2ec8_A 397 SDVNAAIAFNVYVNT 411 (524)
T ss_dssp SSCEEEEEEEEEECE
T ss_pred cCceEEEEEEEEEec
Confidence 999866655555543
No 20
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.92 E-value=5.4e-24 Score=170.82 Aligned_cols=228 Identities=12% Similarity=0.074 Sum_probs=147.1
Q ss_pred ecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecc---eEEecCCCeEEEEEEEeecCCCe-EEEE
Q psy12131 9 NRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQ---WIHTAPDMRAEIICNVYANPPAK-VEWF 84 (245)
Q Consensus 9 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~---~~~~~~g~~~~l~C~~~~~~~~~-~~w~ 84 (245)
..+.|.|.+++.+|+|.|+|.|.|..|. ....+.|.|..+|.+...+. ...+.+|+.+.|.|.+.|.|.|. +.|+
T Consensus 271 ~~~~L~I~~~~~~D~G~Y~C~a~n~~g~-~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~ 349 (524)
T 2ec8_A 271 RQATLTISSARVNDSGVFMCYANNTFGS-ANVTTTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWI 349 (524)
T ss_dssp EEEEEEESSCCTTTCEEEEEEEECSSCE-EEEEEEEEEESSCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEE
T ss_pred eEEEEEECCCCHHHCEEEEEEEEecCCc-eEEEEEEEEeccCceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEE
Confidence 3467999999999999999999998887 56789999999999877653 57788999999999999999998 9999
Q ss_pred ECCEEeccCC-cEEEEecC----ceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEecCCCCccccCccccCCCeeE
Q psy12131 85 RDGTAITLGG-RIDMHVSS----EKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIPNIPVFQKSSRRLGPDGYR 159 (245)
Q Consensus 85 ~~~~~~~~~~-~~~~~~~~----~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 159 (245)
+++..+.... ++.....+ ....|.|.++..+|.|.|+|.|.|..|.....+.|.+.. +|.+........+ .
T Consensus 350 k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~-~P~i~~~~~~~~g---~ 425 (524)
T 2ec8_A 350 YMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFNVYVNT-KPEILTYDRLVNG---M 425 (524)
T ss_dssp SSSCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECE-EEEEEEEECCSSS---C
T ss_pred ECCeeccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCceEEEEEEEEEec-CCeEeecccCcCc---E
Confidence 9998876554 33322222 346899999999999999999999999988888887753 4443333222333 8
Q ss_pred EEEEeCCCCCceEEEEEEEeecCCCCe-EEEeeCCCC----CCCcceeeeE-EEecCCCCCceEEEEEEEEecCCCCCCC
Q psy12131 160 LVWQVDTYSGIIQYLLKFREREELTPW-RNIVIPSDG----SLAGPIYTQS-YNITGLQLFTQYEASVLAKNRFGWSRPS 233 (245)
Q Consensus 160 l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~-~~i~~l~~~~~y~~~v~a~N~~G~~~~s 233 (245)
|.|.+.+.++. .+ .|+++......- ......... .......... ..+......+.+.|+|.|.|.+|....+
T Consensus 426 l~C~~~g~P~p-~i-~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~l~~~~~~d~G~Y~C~a~N~~G~~~~~ 503 (524)
T 2ec8_A 426 LQCVAAGFPEP-TI-DWYFCPGTEQRCSASVLPVDVQTLNSSGPPFGKLVVQSSIDSSAFKHNGTVECKAYNDVGKTSAY 503 (524)
T ss_dssp EEEEEEEESCC-EE-ECCCC----------CCCCCCCCCCC-CCSSSCEEEEEEECCCSCCC-----CEEECSSCEEECC
T ss_pred EEEEEEeecCC-EE-EEEECCCcccccccccCCCCceeeeeccCCCCcceEEEEEEEEEccCCEEEEEEEEcCCCceEEE
Confidence 99999766544 22 244442200000 000000000 0000000111 1133322356667777799999998888
Q ss_pred cceEEecCCC
Q psy12131 234 KAYVFATEGA 243 (245)
Q Consensus 234 ~~~~~~t~~~ 243 (245)
..+.|+..+.
T Consensus 504 ~~l~V~e~~~ 513 (524)
T 2ec8_A 504 FNFAFKGNNK 513 (524)
T ss_dssp CCCCC-----
T ss_pred EEEEEecCCH
Confidence 8887776553
No 21
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.92 E-value=3.2e-23 Score=168.41 Aligned_cols=224 Identities=11% Similarity=0.100 Sum_probs=156.7
Q ss_pred eEEEeccCCCCCEEEEEEEEcCCCCce----eeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCCCeE----EE
Q psy12131 12 SLDLDRVTLKLAGLYQCIASNNIGEST----SKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKV----EW 83 (245)
Q Consensus 12 ~L~i~~~~~~d~G~Y~C~~~~~~~~~~----~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~----~w 83 (245)
.|.|.+++.+|+|.|+|.|.|. |... ...+.|.|..+|.+...+....+.+|+.+.|.|.+.+.|.+.+ .|
T Consensus 291 ~L~i~~v~~~d~G~Y~C~a~n~-g~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~G~~v~l~C~~~~~p~p~i~~w~~W 369 (585)
T 2ocw_A 291 SVVITGLRKEDAGRYLCGAHSD-GQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGSSVAVLCPYNRKESKSIKYWCLW 369 (585)
T ss_pred EEEEccCChhhCEEEEEEEEcC-CCccccCceeeEEEEEecccccccCCcceEEEeCCcEEEEEecCCCCCccEEEEEEE
Confidence 6999999999999999999995 4422 2788899999999887777788889999999999999999876 79
Q ss_pred EE--CCE--Eecc---------CCcEEEEec--CceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEecCCCCcccc
Q psy12131 84 FR--DGT--AITL---------GGRIDMHVS--SEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIPNIPVFQK 148 (245)
Q Consensus 84 ~~--~~~--~~~~---------~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~~~p~~~~ 148 (245)
++ ++. .+.. ..++.+... .....|.|.++..+|.|.|+|.+ |..|.....+.|.+...+|.+..
T Consensus 370 ~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V~~~~p~~~~ 448 (585)
T 2ocw_A 370 EGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLWRTTVEIKIIEGEPNLKV 448 (585)
T ss_pred EccCCCCCceeeeecceeecccCCCEEEeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCccceeEEEEEecCcccccc
Confidence 98 776 3322 234444322 22345999999999999999999 88888777777777655554432
Q ss_pred --CccccCCCeeEEEEEeCCC--CCceEEEEEEEeecC--C----CCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEE
Q psy12131 149 --SSRRLGPDGYRLVWQVDTY--SGIIQYLLKFREREE--L----TPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYE 218 (245)
Q Consensus 149 --~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~ 218 (245)
......++.+.|.|.+.+. +...-...|+++... . .....+... ........|.|.++...+.+.
T Consensus 449 ~~~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~-----~~~~~~~~L~i~~v~~~d~G~ 523 (585)
T 2ocw_A 449 PGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNC-----DENSRLVSLTLNLVTRADEGW 523 (585)
T ss_pred CCceeEecCCcEEEEEEecCCCCCCccEEEEEeecCceeeeccCCCCCcceEEe-----cCcccEEEEEECCCCcccCeE
Confidence 2345678899999999532 111123345554320 0 000000000 001122578999999999999
Q ss_pred EEEEEEecCCCCCCC-cceEEecCC
Q psy12131 219 ASVLAKNRFGWSRPS-KAYVFATEG 242 (245)
Q Consensus 219 ~~v~a~N~~G~~~~s-~~~~~~t~~ 242 (245)
|+|.|.|..|.+... ..+.|...+
T Consensus 524 Y~C~a~N~~G~~~~~~~~l~V~~~p 548 (585)
T 2ocw_A 524 YWCGVKQGHFYGETAAVYVAVEERK 548 (585)
T ss_pred EEEEeEeCCCccEEEEEEEEEEeee
Confidence 999999999987654 456666544
No 22
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.92 E-value=8e-24 Score=160.24 Aligned_cols=214 Identities=12% Similarity=0.131 Sum_probs=147.3
Q ss_pred cceEEEeccCCCCCEEEEEEEE-cCCCCceeeEEEEEEecCCeEEe--ecceEEecCC---CeEEEEEE-EeecCCCeEE
Q psy12131 10 RESLDLDRVTLKLAGLYQCIAS-NNIGESTSKNFIVNVIYPPEVSV--EKQWIHTAPD---MRAEIICN-VYANPPAKVE 82 (245)
Q Consensus 10 ~~~L~i~~~~~~d~G~Y~C~~~-~~~~~~~~~~~~l~v~~~p~~~~--~~~~~~~~~g---~~~~l~C~-~~~~~~~~~~ 82 (245)
..+|.|.+++.+|+|.|+|.+. +..+. ....+.|.|..+|.+.. .+....+.+| +.+.|.|. ..+.|.+.+.
T Consensus 91 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~-~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~ 169 (331)
T 3u83_A 91 DGTIRLSRLELEDEGVYICEFATFPTGN-RESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVS 169 (331)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEEETTEE-EEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEE
T ss_pred CceEEEcccCcccCcEEEEEEEecCCCc-cEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCceEE
Confidence 4569999999999999999855 44454 67889999999888744 3455667777 78999998 7889999999
Q ss_pred EEECCEEec-------cCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEecCCCCccccC---ccc
Q psy12131 83 WFRDGTAIT-------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIPNIPVFQKS---SRR 152 (245)
Q Consensus 83 w~~~~~~~~-------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~~~p~~~~~---~~~ 152 (245)
|++++.... ....+.+ .+.|.|..+...|.|.|+|.+.|..|.....+.+.+...|...... ...
T Consensus 170 W~~~~~~~~~~~~~~~~~~~~~~-----~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~P~~~~~~~~~~~~ 244 (331)
T 3u83_A 170 WETRLKGEAEYQEIRNPNGTVTV-----ISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPEVTIEGFDGNWY 244 (331)
T ss_dssp EEESSCCEEEEEEEECTTSCEEE-----EEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEEEEEEEECCCSCCB
T ss_pred EEcCCCCccccceeECCCCcEEE-----EEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecCCeEEEecCCCceE
Confidence 998532111 1111111 2468888889999999999999999887777766654322222111 224
Q ss_pred cCCCeeEEEEEeCCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEec-CCCCCceEEEEEEEEecCCCCC
Q psy12131 153 LGPDGYRLVWQVDTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNIT-GLQLFTQYEASVLAKNRFGWSR 231 (245)
Q Consensus 153 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~l~~~~~y~~~v~a~N~~G~~~ 231 (245)
..++.+.|.|.+.++++...+ .|+++...-...... ....+.|. .+...+.+.|+|.|.|..|...
T Consensus 245 ~~g~~~~l~C~~~g~p~p~~i-~W~~~~~~~~~~~~~------------~~~~L~i~~~v~~~d~G~Y~C~a~N~~G~~~ 311 (331)
T 3u83_A 245 LQRMDVKLTCKADANPPATEY-HWTTLNGSLPKGVEA------------QNRTLFFKGPINYSLAGTYICEATNPIGTRS 311 (331)
T ss_dssp TTCCCEEEEEEEEEESCCCEE-EEEETTBSCCTTEEE------------ETTEEEECSCCCGGGCEEEEEEEEETTEEEE
T ss_pred eCCCeEEEEEeCcCCCCCCEE-EEEECCCccccccee------------cCcEEEEeCCCccccCeEEEEEEEeccccce
Confidence 668899999999666544323 355543311110111 11467888 7888889999999999999876
Q ss_pred CCcceEEecCC
Q psy12131 232 PSKAYVFATEG 242 (245)
Q Consensus 232 ~s~~~~~~t~~ 242 (245)
.+..+.|...+
T Consensus 312 ~~~~l~V~~~~ 322 (331)
T 3u83_A 312 GQVEVNITEAA 322 (331)
T ss_dssp EEEEECCBC--
T ss_pred EEEEEEEeccc
Confidence 66666665544
No 23
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.92 E-value=4.3e-23 Score=151.15 Aligned_cols=206 Identities=14% Similarity=0.080 Sum_probs=146.0
Q ss_pred ecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEE-eecCCCeEEEEECC
Q psy12131 9 NRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNV-YANPPAKVEWFRDG 87 (245)
Q Consensus 9 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~~~w~~~~ 87 (245)
.+..|.|.+++.+|+|.|+|.+.+..+ +..+.|.|..+|..... ....+.+|+.+.|.|.+ .+.|.+.+.|++++
T Consensus 46 ~~~~l~i~~~~~~d~G~Y~C~~~~~~~---s~~~~l~v~~~~~~~~~-~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g 121 (262)
T 3rjd_A 46 STPSYRITSASVNDSGEYRCQRGLSGR---SDPIQLEIHRGWLLLQV-SSRVFTEGEPLALRCHAWKDKLVYNVLYYRNG 121 (262)
T ss_dssp CSSEEEESSCCGGGCEEEEEEESSSCC---CCCEEEEEECSSEEEEE-SCSEEETTSCEEEEEEEGGGCCCEEEEEEETT
T ss_pred cCCeEEEecCCcccCeEEEEEEecCCc---cccEEEEEeccceEecC-CCeEEecCCeEEEEEEccCCCCCceEEEEECC
Confidence 456799999999999999999987543 45677888777654433 34557789999999999 67788899999999
Q ss_pred EEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEecC--CCCccccC--ccccCCCeeEEEEE
Q psy12131 88 TAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIP--NIPVFQKS--SRRLGPDGYRLVWQ 163 (245)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~--~~p~~~~~--~~~~~~~~~~l~~~ 163 (245)
..+.... ....|.|.++...|.|.|+|.+.|..+.....+.+.+.. .+|.+... .....++.+.|.|.
T Consensus 122 ~~~~~~~--------~~~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~p~~~~~~~~~~~~g~~~~l~C~ 193 (262)
T 3rjd_A 122 KAFKFFH--------WNSNLTILKTNISHNGTYHCSGMGKHRYTSAGISVTVKELFPAPVLNASVTSPLLEGNLVTLSCE 193 (262)
T ss_dssp EEEEEEE--------ECCCEEESSCCGGGCEEEEEEEESSSEEEEECEEEEEECSSCCCEEEESSCSSEETTCCEEEEEE
T ss_pred ccccccC--------CCCeEEEEECChhhCEEEEEEEeCCCCccccceEEEeccCCCCCeEeecCceeecCCCeEEEEeE
Confidence 8764321 234799999999999999999999988777766665543 34443322 23567899999999
Q ss_pred eCCCC--CceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCC-CCCcceEEe
Q psy12131 164 VDTYS--GIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWS-RPSKAYVFA 239 (245)
Q Consensus 164 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~-~~s~~~~~~ 239 (245)
+.+.+ |...|.+.|...+ .. +..... ...+.|..+...+.+.|.|.|.|..|.. ..|..+.++
T Consensus 194 ~~~~p~~p~~~~~~~w~~~~--~~---~~~~~~--------~~~L~i~~v~~~d~G~Y~C~a~n~~G~~~~~s~~~~l~ 259 (262)
T 3rjd_A 194 TKLLLQRPGLQLYFSFYMGS--KT---LRGRNT--------SSEYQILTARREDSGLYWCEAATEDGNVLKRSPELELQ 259 (262)
T ss_dssp CCCCCC-----EEEEEEETT--EE---EEEEES--------CCEEEESSCCGGGCEEEEEEEEETTSSCEEECCCEEEC
T ss_pred cccCCCCCCccEEEEEEeCC--cE---ecccCC--------CceEEEEEechhhCeEEEEEEEcccCceEEecCCeEEE
Confidence 97764 4444544333321 11 111111 1568899999999999999999999964 445555554
No 24
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.92 E-value=1.2e-24 Score=166.09 Aligned_cols=226 Identities=12% Similarity=0.056 Sum_probs=131.3
Q ss_pred eecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEee----cceEEecCCCeEEEEEEE-----eecCC
Q psy12131 8 YNRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVE----KQWIHTAPDMRAEIICNV-----YANPP 78 (245)
Q Consensus 8 ~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~----~~~~~~~~g~~~~l~C~~-----~~~~~ 78 (245)
..+..|.|.+++.+|+|.|+|.|.|..+. ....+.|.|..+|.+... +....+..|+.+.|.|.+ .+.|.
T Consensus 76 ~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~-~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~ 154 (349)
T 4dep_C 76 KEKDVLWFRPTLLNDTGNYTCMLRNTTYC-SKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVK 154 (349)
T ss_dssp EETTEEEESSCCGGGCEEEEEEEECSSCE-EEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSC
T ss_pred ecCCEEEEccCChhhCEEEEEEEecCCce-EEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCC
Confidence 34567999999999999999999998776 567788888876543222 234567899999999985 67888
Q ss_pred CeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCC-cee---EEEEEEEecCC-----CCccccC
Q psy12131 79 AKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNL-GSS---QQFIQLSGIPN-----IPVFQKS 149 (245)
Q Consensus 79 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~-g~~---~~~~~~~~~~~-----~p~~~~~ 149 (245)
+.+.|++++..+.....+.. . ...|.|.++..+|.|.|+|.+.|.. |.. ...+.+.+... +|.+...
T Consensus 155 ~~v~W~k~~~~l~~~~~~~~--~--~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~ 230 (349)
T 4dep_C 155 PTITWYMGCYKIQNFNNVIP--E--GMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSP 230 (349)
T ss_dssp CEEEEEETTEECCSCSSEEE--E--TTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC--
T ss_pred ceEEEeeCCEECCCccceee--c--CCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEecC
Confidence 99999999998865433322 1 2479999999999999999999986 543 55666665432 4444332
Q ss_pred c-----cccCCCeeEEEEEeCCC---CCceEEEEEEEeecCCCCe--EEEeeCC---CCCCCcceeeeEEEecCCCCCce
Q psy12131 150 S-----RRLGPDGYRLVWQVDTY---SGIIQYLLKFREREELTPW--RNIVIPS---DGSLAGPIYTQSYNITGLQLFTQ 216 (245)
Q Consensus 150 ~-----~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~i~~l~~~~~ 216 (245)
. ....++.+.|.|.+.++ .|...+ .|+++.. .... ....... ............+.|.++...+.
T Consensus 231 ~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v-~W~~~g~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~ 308 (349)
T 4dep_C 231 NDHVVYEKEPGEELLIPCTVYFSFLMDSRNEV-WWTIDGK-KPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDL 308 (349)
T ss_dssp --------------CCCEEEEECCCTTCCCEE-EEESSCC---------CCCCEEEECCTTCCEEEEECC----------
T ss_pred CCceeEEEecCCcEEEEEEEEEccCCCCCCEE-EEEECCE-EccccCCccccccceeeecCCCcEEEEEEEEeeccHHHc
Confidence 2 44568899999999632 122222 2443332 0000 0000000 00001112234578888888888
Q ss_pred -EEEEEEEEecCCCCCCCcceEEec
Q psy12131 217 -YEASVLAKNRFGWSRPSKAYVFAT 240 (245)
Q Consensus 217 -y~~~v~a~N~~G~~~~s~~~~~~t 240 (245)
+.|+|.|.|..|....+..+.+..
T Consensus 309 ~G~Y~C~a~N~~G~~~~~~~l~v~~ 333 (349)
T 4dep_C 309 KRSYVCHARSAKGEVAKAAKVKQKV 333 (349)
T ss_dssp ---CEEEEECSSCEEEEECC-----
T ss_pred CCcEEEEEEcCCCcEEEEEEEeeec
Confidence 888888999999887777777654
No 25
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.92 E-value=6.4e-23 Score=166.64 Aligned_cols=218 Identities=15% Similarity=0.152 Sum_probs=152.0
Q ss_pred cceEEEe----ecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecC
Q psy12131 2 KEIELLY----NRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANP 77 (245)
Q Consensus 2 ~~~~~~~----~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~ 77 (245)
+|+.+.. +...|.|.+++.+|+|.|+|.+.+..+. .+..+.|.|..+|.+...+....+.+|+.+.|.|.+.+.+
T Consensus 62 ~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~~~n~~~~-~~~~~~l~V~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~ 140 (585)
T 2ocw_A 62 GRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRG-LSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTEN 140 (585)
T ss_pred ceEEEEecCCCCEEEEEECCCCcccCEEEEEEcccCCCC-ceEEEEEEEecCccccCCCccEEEEcCCCEEEEEEecCCC
Confidence 4666653 2246999999999999999999998776 5788999999999988878888899999999999998654
Q ss_pred -CCeEEEEECCEEec-------------cCCcEEEEecCc---eeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEec
Q psy12131 78 -PAKVEWFRDGTAIT-------------LGGRIDMHVSSE---KHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGI 140 (245)
Q Consensus 78 -~~~~~w~~~~~~~~-------------~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~ 140 (245)
.+.+.|++++.... ...++.+...+. ...|.|.++...|.|.|+|.+.|..|.....+.|.+.
T Consensus 141 ~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~ 220 (585)
T 2ocw_A 141 AQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVL 220 (585)
T ss_pred CCccEEEEECCCCCceEEecCCcccCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCccccceEEEEEc
Confidence 56899999874321 123344433322 3479999999999999999999999988788888877
Q ss_pred CCCCccccCccccCCCeeEEEEEeCCCCCc-eEEEEEEEeecCCCCe------------EEEeeCCCCCCCcceeeeEEE
Q psy12131 141 PNIPVFQKSSRRLGPDGYRLVWQVDTYSGI-IQYLLKFREREELTPW------------RNIVIPSDGSLAGPIYTQSYN 207 (245)
Q Consensus 141 ~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~ 207 (245)
..+|.... ...++.+.|.|......|. ..|.+.+++....... ..+..... .......+.
T Consensus 221 ~~~p~~~~---~~~G~~v~l~C~~~~~~~~~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~L~ 293 (585)
T 2ocw_A 221 KPEPELVY---EDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQ----DKDGSFSVV 293 (585)
T ss_pred cCCCceeE---EcCCCcEEEEEEcCCCCCCceEEEEEeCCCCCcceEEeCCCcCCcccCCceEeecc----CCCcEEEEE
Confidence 65554432 3578899999998443332 3443222332100000 00000000 000113688
Q ss_pred ecCCCCCceEEEEEEEEecC
Q psy12131 208 ITGLQLFTQYEASVLAKNRF 227 (245)
Q Consensus 208 i~~l~~~~~y~~~v~a~N~~ 227 (245)
|.++...+.+.|+|.|.|..
T Consensus 294 i~~v~~~d~G~Y~C~a~n~g 313 (585)
T 2ocw_A 294 ITGLRKEDAGRYLCGAHSDG 313 (585)
T ss_pred EccCChhhCEEEEEEEEcCC
Confidence 99999999999999999963
No 26
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.92 E-value=1.1e-24 Score=163.45 Aligned_cols=220 Identities=14% Similarity=0.115 Sum_probs=145.1
Q ss_pred cceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEe--ecceEEecCCCeEEEEEEE-eecCCCeEEEEEC
Q psy12131 10 RESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSV--EKQWIHTAPDMRAEIICNV-YANPPAKVEWFRD 86 (245)
Q Consensus 10 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~--~~~~~~~~~g~~~~l~C~~-~~~~~~~~~w~~~ 86 (245)
..+|.|.+++.+|+|.|+|.|.+..+...+..+.+.+..+|.+.. .+.......++.+.|.|.+ .|.|.+.+.|+++
T Consensus 73 ~~sL~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~ 152 (308)
T 4fom_A 73 DATITLHNIGFSDSGKYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGD 152 (308)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCC
T ss_pred ceEEEEccCCHHHCEEEEEEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCceEEEEEC
Confidence 356999999999999999999987544366777788877666543 2344445678899999975 6889999999998
Q ss_pred CEEeccCCcEEE-EecCceeEEEEccCCCCCCeEEEEEEEeCCceeEE--EEEEEecCCCCcccc----CccccCCCeeE
Q psy12131 87 GTAITLGGRIDM-HVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQ--FIQLSGIPNIPVFQK----SSRRLGPDGYR 159 (245)
Q Consensus 87 ~~~~~~~~~~~~-~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~--~~~~~~~~~~p~~~~----~~~~~~~~~~~ 159 (245)
+..+........ ......+.|.|..+...|.|.|+|.+.|..+.... .+.|.+. .+|.+.. ......++.+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~-~~P~~~~~~~~~~~~~~g~~v~ 231 (308)
T 4fom_A 153 LGEMESTTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQ-YAPEVSVTGYDGNWFVGRKGVN 231 (308)
T ss_dssp SSBCCEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCC-EEEEECCBCCCSCEETTCCSCE
T ss_pred CcccccccceeeeecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEe-cCCeeEEcccceeeeeccccEE
Confidence 876543211000 00011346899999999999999999998765443 3333332 2222211 12335677899
Q ss_pred EEEEeCCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceEEe
Q psy12131 160 LVWQVDTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYVFA 239 (245)
Q Consensus 160 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~~ 239 (245)
|.|.+.++++...+. |+++.. .......... ...+.|..+...+.+.|+|.|.|.+|....+..+.|.
T Consensus 232 l~C~~~g~P~p~~v~-W~k~~~---~~~~~~~~~~--------~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~~~l~V~ 299 (308)
T 4fom_A 232 LKCNADANPPPFKSV-WSRLDG---QWPDGLLASD--------NTLHFVHPLTFNYSGVYICKVTNSLGQRSDQKVIYIS 299 (308)
T ss_dssp EECCEEEESCEEEEE-CCBSSS---CCCSSCBCST--------TEEECCSCCCSCCCSEEEEEEEETTEEEEEEEECCEE
T ss_pred EEEEEecCCCCcEEE-EEECCe---ECCCcEEEcC--------CeEEEECCCChhhCEEEEEEEEeCCCcEEEEEEEEEE
Confidence 999997775543333 554432 1100001111 1445677888888888888899999988777777776
Q ss_pred cCC
Q psy12131 240 TEG 242 (245)
Q Consensus 240 t~~ 242 (245)
.+|
T Consensus 300 ~~P 302 (308)
T 4fom_A 300 DPP 302 (308)
T ss_dssp CCC
T ss_pred cCC
Confidence 654
No 27
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.92 E-value=7.9e-24 Score=163.34 Aligned_cols=216 Identities=15% Similarity=0.133 Sum_probs=150.6
Q ss_pred eEEEeecceEEEeccCCCCCEEEEEEEEcCCCCc----eeeEEEEEEe------cCCeEEee-cceEEecCCCeEEEEEE
Q psy12131 4 IELLYNRESLDLDRVTLKLAGLYQCIASNNIGES----TSKNFIVNVI------YPPEVSVE-KQWIHTAPDMRAEIICN 72 (245)
Q Consensus 4 ~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~----~~~~~~l~v~------~~p~~~~~-~~~~~~~~g~~~~l~C~ 72 (245)
..+..+...|.|.+++.+|+|.|+|.+.+..|.. .+..+.|.|. .+|.+... +....+..|+.+.|.|.
T Consensus 151 ~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~~~~~~G~~v~l~C~ 230 (382)
T 1cs6_A 151 RFVSQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECF 230 (382)
T ss_dssp EEECTTTCCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEECCCSEEEEETTCCEEEECE
T ss_pred EEEecCceEEEEEeeCcccCeeEEEEEEEccccccceeEccceeeccchhhcccCCCceeccCCCceEEeCCCeEEEEEE
Confidence 3334444679999999999999999999876531 1233455543 24555443 44667889999999999
Q ss_pred EeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEecCCCCccc--cCc
Q psy12131 73 VYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIPNIPVFQ--KSS 150 (245)
Q Consensus 73 ~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~~~p~~~--~~~ 150 (245)
+.+.|.+.+.|++++..+... .......|.|.++..+|.|.|+|.+.|..|.....+.+.+...|.... ...
T Consensus 231 ~~g~p~~~i~W~~~~~~~~~~------~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~ 304 (382)
T 1cs6_A 231 AFGNPVPQIKWRKLDGSQTSK------WLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPDWLDVITDT 304 (382)
T ss_dssp EEEESCCEEEEEECCSCCSCC------CSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCE
T ss_pred EccCCCCEEEEEECCcccccE------EecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCCcccCCCcc
Confidence 999999999999987655431 112345799999999999999999999999877777766543222111 112
Q ss_pred cccCCCeeEEEEEeCCCCCceEEEEEEEeec--CCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCC
Q psy12131 151 RRLGPDGYRLVWQVDTYSGIIQYLLKFRERE--ELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFG 228 (245)
Q Consensus 151 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G 228 (245)
....++.+.|.|.+.+.++.. ..|+++.. .......+ ....+.|.++...+.+.|+|.|.|..|
T Consensus 305 ~~~~g~~~~l~C~~~g~p~p~--v~W~~~g~~~~~~~~~~~------------~~~~L~i~~v~~~d~G~Y~C~a~N~~G 370 (382)
T 1cs6_A 305 EADIGSDLRWSCVASGKPRPA--VRWLRDGQPLASQNRIEV------------SGGELRFSKLVLEDSGMYQCVAENKHG 370 (382)
T ss_dssp EEETTCCEEEECEEEEESCCE--EEEEETTEECCCCSSEEE------------ETTEEEESSCCGGGCEEEEEEEEETTE
T ss_pred EEcCCCeEEEEEEeeeecCCE--EEEEECCEECCCCceEEE------------ECCEEEECcCCcccCEEEEEEEEeCCC
Confidence 346788999999997654432 23555433 11111111 114688999999999999999999999
Q ss_pred CCCCCcceEEe
Q psy12131 229 WSRPSKAYVFA 239 (245)
Q Consensus 229 ~~~~s~~~~~~ 239 (245)
....+..+.|.
T Consensus 371 ~~~~~~~l~V~ 381 (382)
T 1cs6_A 371 TVYASAELTVQ 381 (382)
T ss_dssp EEEEEEEEEEE
T ss_pred eEEEEEEEEEe
Confidence 88766666553
No 28
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.91 E-value=2.4e-23 Score=157.65 Aligned_cols=219 Identities=12% Similarity=0.113 Sum_probs=145.8
Q ss_pred cceEEEeccCCCCCE-EEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecC-CCeEEEEECC
Q psy12131 10 RESLDLDRVTLKLAG-LYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANP-PAKVEWFRDG 87 (245)
Q Consensus 10 ~~~L~i~~~~~~d~G-~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~-~~~~~w~~~~ 87 (245)
+.+|.|.+++.+|+| .|+|.|.|..|......+.+.+..+|.+........+.+|+.+.|.|.+.+.| .+.+.|++++
T Consensus 88 ~~~L~i~~v~~~D~Gs~Y~C~a~n~~g~~~~~~~~~v~~~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~ 167 (329)
T 3oq3_B 88 NGDLWIANYTSNDSHRRYLCTVTTKNGDCVQGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNN 167 (329)
T ss_dssp TTEEEESSCCGGGGGCCEEEEEECTTSCEEEEEEEEEECCCCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETT
T ss_pred cceEEEcCCChHhCCCcEEEEEEeCCCceeeEEEEEEEcCCCcEeccccceEEeCCCcEEEEeccCCCCCCceEEEEECC
Confidence 567999999999999 99999999887643333334455566654444444466799999999999999 8999999999
Q ss_pred EEecc-CCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeC--CceeEE----EEEEEecCCC----CccccC-ccccCC
Q psy12131 88 TAITL-GGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNN--LGSSQQ----FIQLSGIPNI----PVFQKS-SRRLGP 155 (245)
Q Consensus 88 ~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~--~g~~~~----~~~~~~~~~~----p~~~~~-~~~~~~ 155 (245)
..+.. ..++... ...|.|.++..+|.|.|+|.+.|. .|.... .+.+.+...+ |.+... .....+
T Consensus 168 ~~l~~~~~~~~~~----~~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~v~~G 243 (329)
T 3oq3_B 168 QELIIDGTKYSQS----GQNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLILDPKINVTIG 243 (329)
T ss_dssp EECCCSSSSEEEE----TTEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEECCSEEEECTT
T ss_pred ccCCCCCceEecC----CCEEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCceecCCeeEEecC
Confidence 88753 3344332 257999999999999999999987 543333 2555554433 333111 234678
Q ss_pred CeeEEEEEeCCCC---CceEEEEEEEeecC----CCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceE-EEEEEEEecC
Q psy12131 156 DGYRLVWQVDTYS---GIIQYLLKFREREE----LTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQY-EASVLAKNRF 227 (245)
Q Consensus 156 ~~~~l~~~~~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y-~~~v~a~N~~ 227 (245)
+.+.|.|.+.+.+ +...+ .|+++... ........... .......+.|.++...+.+ .|+|.|.|.+
T Consensus 244 ~~~~l~C~~~g~p~~~~~i~v-~W~~~g~~i~~~~~~~~~~~~~~-----~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~ 317 (329)
T 3oq3_B 244 EPANITCTAVSTSLLVDDVLI-DWENPSGWIIGLDFGVYSILTSS-----GGITEATLYFENVTEEYIGNTYTCRGHNYY 317 (329)
T ss_dssp SCEEEEEEEEETTCCTTCCEE-EEECTTSCBCCBCSSEEEEEEEE-----TTEEEEEEEESSCCGGGTTCEEEEEEECSS
T ss_pred CCEEEEEEEEECCCCCCCcEE-EEEECCeeeeccCCceeeeeccc-----CceeEeEEEEEeccHHHCCCcEEEEEEecC
Confidence 8999999996654 22122 24443220 01000000000 0123467899999888888 8888899999
Q ss_pred CCCCCCcceEE
Q psy12131 228 GWSRPSKAYVF 238 (245)
Q Consensus 228 G~~~~s~~~~~ 238 (245)
|....+..+.+
T Consensus 318 G~~~~~~~l~v 328 (329)
T 3oq3_B 318 FDKTLTTTVVL 328 (329)
T ss_dssp CEEEEEEEEEE
T ss_pred CceEEEEEEEe
Confidence 98766554443
No 29
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.91 E-value=9.5e-25 Score=162.50 Aligned_cols=223 Identities=16% Similarity=0.134 Sum_probs=147.5
Q ss_pred cceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeE-EeecceEEecCCCeEEEEEEEeecCC--CeEEEEEC
Q psy12131 10 RESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEV-SVEKQWIHTAPDMRAEIICNVYANPP--AKVEWFRD 86 (245)
Q Consensus 10 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~-~~~~~~~~~~~g~~~~l~C~~~~~~~--~~~~w~~~ 86 (245)
.+.|.|.+++.+|+|.|+|.+.|..+. .+..+.|.|..+|.. ...+....+.+|+.+.|.|.+.+ +. +.+.|+++
T Consensus 50 ~~~L~i~~~~~~d~G~Y~C~~~n~~~~-~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~ 127 (292)
T 4dkd_C 50 SSILSTNNATFQNTGTYRCTEPGDPLG-GSAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRV 127 (292)
T ss_dssp EEEEEESSCCGGGCSCEEECCCC-----CCEEECCEECCSSCCEEESCSEEEEETTSCEECCEEESS-GGGGSSEEEEEG
T ss_pred eEEEEEcccccccCEEEEEEEccCCCC-cceEEEEEEcCccccccccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEec
Confidence 357999999999999999999998777 588888999987764 44556677889999999999987 44 68999986
Q ss_pred -CEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEE-EEEEEecC---CCCccccC---ccccCCCee
Q psy12131 87 -GTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQ-FIQLSGIP---NIPVFQKS---SRRLGPDGY 158 (245)
Q Consensus 87 -~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~-~~~~~~~~---~~p~~~~~---~~~~~~~~~ 158 (245)
+..+....++.... ...|.|.++...|.|.|+|.+.|..+.... .+.+.+.. .+|.+... .....++.+
T Consensus 128 ~~~~~~~~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~v 204 (292)
T 4dkd_C 128 RGRPLMRHTNYSFSP---WHGFTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAA 204 (292)
T ss_dssp GGCCCCSSCCEECCS---SSCCEETTCCGGGCSEEEEEECSTTSCEECCCEEEEEECCCCSSCEEEEESSCBCCCSSSCE
T ss_pred CCCccccCCcccccC---CceEEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeCCCCCCCeEEccCCceeEecCCCE
Confidence 55555544444332 234999999999999999999988775432 45555443 24443332 223578899
Q ss_pred EEEEEeCCCCCceEEEEEEEeec-CCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceE
Q psy12131 159 RLVWQVDTYSGIIQYLLKFRERE-ELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYV 237 (245)
Q Consensus 159 ~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~ 237 (245)
.|.|.+.+.++...|. |+++.. ........ .... .......+.|.++...+.+.|+|.|.|..|....+..+.
T Consensus 205 ~l~C~~~~~~~~~~~~-w~~~~~~~~~~~~~~-~~~~----~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~ 278 (292)
T 4dkd_C 205 QIVCSASSVDVNFDVF-LQHNNTKLAIPQQSD-FHNN----RYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFR 278 (292)
T ss_dssp EEEEEEEESSSCCEEE-CCBSSCCCCCCBEEE-EETT----EEEEEEEEEESSCCTTSCEEEEEEEECSSCEEEEEEEEC
T ss_pred EEEEEecCCCCceEEE-EeCCCcccccCccce-eccc----eeeeEEEEEECccChhcCeEEEEEEecCCCCceeEEEEE
Confidence 9999997554432222 233322 00111100 0000 011225789999999999999999999999877766666
Q ss_pred EecCCC
Q psy12131 238 FATEGA 243 (245)
Q Consensus 238 ~~t~~~ 243 (245)
|.....
T Consensus 279 V~~~~~ 284 (292)
T 4dkd_C 279 VVESAG 284 (292)
T ss_dssp C-----
T ss_pred EeeCCC
Confidence 655443
No 30
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.91 E-value=2e-22 Score=155.88 Aligned_cols=225 Identities=16% Similarity=0.233 Sum_probs=152.4
Q ss_pred ceEEEee--cceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEee----c
Q psy12131 3 EIELLYN--RESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYA----N 76 (245)
Q Consensus 3 ~~~~~~~--~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~----~ 76 (245)
++.+..+ ...|.|.+++.+|+|.|+|.|.|..|. ....+.|.+..+|....... .....+..+.|.|.... .
T Consensus 148 ~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~-~~~~~~l~v~~~P~~P~~~~-~~~~~~~~~~l~w~~p~~~~g~ 225 (389)
T 2jll_A 148 NLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGT-RFQEYILALADVPSSPYGVK-IIELSQTTAKVSFNKPDSHGGV 225 (389)
T ss_dssp TEEEEECSSCEEEEECCCSTTSSEEEEEEEEETTEE-EEEEEEEEECCCCCCCEEEE-EEEECSSCEEEEEECCSCCTTS
T ss_pred eEEEeccCCEEEEEECCCChhhCEEEEEEEEcCCCc-EEEEEEEEecCCCCCCcceE-EeeccCCEEEEEEeCCCCCCCc
Confidence 4555433 346999999999999999999999888 56777888876665322211 12234677888887421 1
Q ss_pred CCC--eEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEE--EEEEEe----cCCCCcccc
Q psy12131 77 PPA--KVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQ--FIQLSG----IPNIPVFQK 148 (245)
Q Consensus 77 ~~~--~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~--~~~~~~----~~~~p~~~~ 148 (245)
+.. .+.|.+++.. .+..+........+.|.++...+.|.|+|.|.|..|.... .+.+.. .|.+|...
T Consensus 226 pi~~y~v~~~~~~~~----~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t~~~~~p~~p~~~- 300 (389)
T 2jll_A 226 PIHHYQVDVKEVASE----IWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPVREPSPPSIH- 300 (389)
T ss_dssp CEEEEEEEEEETTCS----CCEEEECSTTCSEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEECCCCCCCCCCCEE-
T ss_pred ceEEEEEEEEECCCc----ccEEeeccCCcceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEEecCCCCCCCCccc-
Confidence 222 4667765541 2223333334567999999999999999999999876443 222222 34444322
Q ss_pred CccccCCCeeEEEEEe--CCCCCceEEEEEEEeecCCCCeEE-EeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEe
Q psy12131 149 SSRRLGPDGYRLVWQV--DTYSGIIQYLLKFREREELTPWRN-IVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKN 225 (245)
Q Consensus 149 ~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N 225 (245)
......+++.|.|.+ ++++++.+|.++|+... ...|.. ....... ..+.+.+|.+++.|.|+|.|.|
T Consensus 301 -~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~-~~~~~~~~~~~~~~--------~~~~i~~L~~~t~Y~~~V~A~n 370 (389)
T 2jll_A 301 -GQPSSGKSFKLSITKQDDGGAPILEYIVKYRSKD-KEDQWLEKKVQGNK--------DHIILEHLQWTMGYEVQITAAN 370 (389)
T ss_dssp -EEEETTTEEEEEECCCCCCSSCCCEEEEEEEC------CCBCCEECTTC--------CEEEECSCCTTCEEEEEEEEEC
T ss_pred -cccCcCCEEEEEEECCCCCCCcccEEEEEEEeCC-CCcceeEeeccCCc--------ceEEeCCcCCCCEEEEEEEEEc
Confidence 223577899999998 44578999999999865 455642 2222222 6789999999999999999999
Q ss_pred cCCCCCCCcceEEecCCCCC
Q psy12131 226 RFGWSRPSKAYVFATEGAET 245 (245)
Q Consensus 226 ~~G~~~~s~~~~~~t~~~~~ 245 (245)
..|.|.+|.. .++|.+.|+
T Consensus 371 ~~G~s~~s~~-~~~T~~~P~ 389 (389)
T 2jll_A 371 RLGYSEPTVY-EFSMPPKPN 389 (389)
T ss_dssp -CCBCCCEEE-EEECCCCCC
T ss_pred CCcCCCceee-EecCCCCCC
Confidence 9999999855 888888774
No 31
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.91 E-value=5.5e-22 Score=162.82 Aligned_cols=216 Identities=19% Similarity=0.301 Sum_probs=150.2
Q ss_pred cceEEEeecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCe-EEeecceEEecCCCeEEEEEEEeecCCCe
Q psy12131 2 KEIELLYNRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPE-VSVEKQWIHTAPDMRAEIICNVYANPPAK 80 (245)
Q Consensus 2 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~-~~~~~~~~~~~~g~~~~l~C~~~~~~~~~ 80 (245)
.|+.+..++..|.|.+++.+|+|.|+|.|.|..+...+..+.|.|..+|. +...+....+..|+.+.|.|.+.+.|.+.
T Consensus 155 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~G~~~~l~C~~~g~p~~~ 234 (642)
T 1e07_A 155 PRLQLSNGNRTLTLFNVTRNDTASYKCETQNPVSARRSDSVILNVLYGPDAPTISPLNTSYRSGENLNLSCHAASNPPAQ 234 (642)
T ss_pred CceEEcCCCCEEEEeCCCcccCeeEEEEEecCCCCcccceEEEEEEeCCCCcEEecCCcccccCCEEEEEEEcCCCCCcE
Confidence 45666666778999999999999999999998876556778888886544 33344555678999999999999999999
Q ss_pred EEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEE--EEEEEec--CCCCccccC--ccccC
Q psy12131 81 VEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQ--FIQLSGI--PNIPVFQKS--SRRLG 154 (245)
Q Consensus 81 ~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~--~~~~~~~--~~~p~~~~~--~~~~~ 154 (245)
+.|++++..+.. ...|.|.++...|.|.|+|.+.|..|.... .+.+.+. +.+|.+... .....
T Consensus 235 i~W~~~g~~i~~-----------~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~~~~~~~~~ 303 (642)
T 1e07_A 235 YSWFVNGTFQQS-----------TQELFIPNITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEPPKPFITSNNSNPVED 303 (642)
T ss_pred EEEEECCeEccc-----------CCceEEecccccCCeEEEEEEEeCCCceEEeeeEEEEEEccCCCCEEEcCCceeEec
Confidence 999999987643 235899999999999999999998875443 3344443 233333221 22234
Q ss_pred CCeeEEEEEeCCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCC-C
Q psy12131 155 PDGYRLVWQVDTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRP-S 233 (245)
Q Consensus 155 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~-s 233 (245)
++.+.|.|.+.+.++ .+ .|+++...-.....+...... ..+.|.++...+.+.|+|.|.|..|.... +
T Consensus 304 g~~v~l~C~~~~~p~--~v-~W~~~g~~l~~~~~~~~~~~~--------~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~ 372 (642)
T 1e07_A 304 EDAVALTCEPEIQNT--TY-LWWVNNQSLPVSPRLQLSNDN--------RTLTLLSVTRNDVGPYECGIQNELSVDHSDP 372 (642)
T ss_pred CCcEEEEEECCCCCc--cE-EEEECCccCCCcCCEEEeCCC--------CEEEEeccCcccCeeEEEEEeCCCCCcceee
Confidence 667999999976643 23 345543310000111111111 46888899889999999999999986432 2
Q ss_pred cceEEe
Q psy12131 234 KAYVFA 239 (245)
Q Consensus 234 ~~~~~~ 239 (245)
..+.+.
T Consensus 373 ~~l~V~ 378 (642)
T 1e07_A 373 VILNVL 378 (642)
T ss_pred EEEEEE
Confidence 344444
No 32
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.91 E-value=1.5e-23 Score=157.78 Aligned_cols=223 Identities=17% Similarity=0.225 Sum_probs=147.3
Q ss_pred cceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEe-cCCeEEeec---ceEEecCCCeEEEEEEE------eecCCC
Q psy12131 10 RESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVI-YPPEVSVEK---QWIHTAPDMRAEIICNV------YANPPA 79 (245)
Q Consensus 10 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~-~~p~~~~~~---~~~~~~~g~~~~l~C~~------~~~~~~ 79 (245)
+..|.|.+++.+|+|.|+|.+.|..|. ....+.+.+. .+|.+...+ ....+..|+.+.|.|.+ .|.|.+
T Consensus 61 ~~~L~i~~v~~~D~G~Y~C~a~n~~g~-~~~~~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~ 139 (315)
T 1itb_B 61 KEKLWFVPAKVEDSGHYYCVVRNSSYC-LRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELP 139 (315)
T ss_dssp SSBEECTTCCGGGCSCCEECCCSSSCC-CCEECCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCC
T ss_pred CCeEEECCCChhhCEEEEEEEeCCceE-EEEEEEEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCC
Confidence 447999999999999999999998776 4555555544 345443222 23457789999999998 788999
Q ss_pred eEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEE-eCCcee---EEEEEEEec----CCCCccccCc-
Q psy12131 80 KVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQAS-NNLGSS---QQFIQLSGI----PNIPVFQKSS- 150 (245)
Q Consensus 80 ~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~-n~~g~~---~~~~~~~~~----~~~p~~~~~~- 150 (245)
.+.|++++..+.......... ...|.|.++..+|.|.|+|.+. |..|.. ...+.+.+. +.+|.+....
T Consensus 140 ~i~W~k~~~~l~~~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~ 216 (315)
T 1itb_B 140 KLQWYKDCKPLLLDNIHFSGV---KDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPAN 216 (315)
T ss_dssp CCEEEETTEECCCCSSSEEEE---TTEEEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSCCS
T ss_pred EEEEEECCEECCCccceEeec---CceEEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecCCC
Confidence 999999999886533222222 2379999999999999999999 777765 334444333 3455554322
Q ss_pred ---cccCCCeeEEEEEeCCCCCceEEEEEEEeec---CCCC---eEEEeeCCCCCCCcceeeeEEEecCCCCCc-eEEEE
Q psy12131 151 ---RRLGPDGYRLVWQVDTYSGIIQYLLKFRERE---ELTP---WRNIVIPSDGSLAGPIYTQSYNITGLQLFT-QYEAS 220 (245)
Q Consensus 151 ---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~-~y~~~ 220 (245)
....++.+.|.|.+.+.++. .+ .|+++.. .... ....................+.|.++...+ .+.|+
T Consensus 217 ~~~~~~~g~~v~l~C~~~g~P~p-~i-~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~ 294 (315)
T 1itb_B 217 ETMEVDLGSQIQLICNVTGQLSD-IA-YWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFT 294 (315)
T ss_dssp EEEECCSSSCEEEEEEEEECTTS-EE-EEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEE
T ss_pred CcEEEeCCCcEEEEEEEecCCCC-ee-EEEECCEECCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceE
Confidence 35678899999999766443 22 3554432 1111 011111111100111223578999998877 77777
Q ss_pred EEEEecCCCCCCCcceEE
Q psy12131 221 VLAKNRFGWSRPSKAYVF 238 (245)
Q Consensus 221 v~a~N~~G~~~~s~~~~~ 238 (245)
|.|.|.+|....+..+.+
T Consensus 295 C~a~N~~G~~~~~~~l~v 312 (315)
T 1itb_B 295 CFAKNTHGIDAAYIQLIY 312 (315)
T ss_dssp EEEECTTCCEEEEEEEEC
T ss_pred EEEecCCCceeEEEEEEe
Confidence 789999998876655554
No 33
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.91 E-value=1e-22 Score=171.31 Aligned_cols=217 Identities=16% Similarity=0.179 Sum_probs=157.3
Q ss_pred ceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEe
Q psy12131 11 ESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAI 90 (245)
Q Consensus 11 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~ 90 (245)
+.|.|.+++.+|+|.|+|.|.|..|. ....+.|.|..+|.+... ....+..|+.+.|.|.+.+.|.+.+.|++++..+
T Consensus 490 ~~L~i~~v~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~~~p~~~~~-~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~~~~l 567 (816)
T 3dmk_A 490 SYLNITSVHANDGGLYKCIAKSKVGV-AEHSAKLNVYGLPYIRQM-EKKAIVAGETLIVTCPVAGYPIDSIVWERDNRAL 567 (816)
T ss_dssp EEEEESSCCTTTCEEEEEEEEETTEE-EEEEEEEEECSSCEECCC-CCEEEETTCCEEEECCEECSSEEEEEEEETTEES
T ss_pred EEEEEeeccccCCEEEEEEEEECCCe-EEEEEEEEEecCCeeEcc-CCeEEecCCeEEEEEEecCCCCCEEEEEECCeEc
Confidence 35999999999999999999999887 678889999998866443 3456779999999999999998999999999988
Q ss_pred ccCCcEEEEecCceeEEEEccCC-CCCCeEEEEEEEeCCcee-EEEEEEEecCCCCccc---cCccccCCCeeEEEEEeC
Q psy12131 91 TLGGRIDMHVSSEKHSLLVRHIK-DTDFGNYMCQASNNLGSS-QQFIQLSGIPNIPVFQ---KSSRRLGPDGYRLVWQVD 165 (245)
Q Consensus 91 ~~~~~~~~~~~~~~~~l~i~~~~-~~d~g~y~C~~~n~~g~~-~~~~~~~~~~~~p~~~---~~~~~~~~~~~~l~~~~~ 165 (245)
....+..+.. ...|.|.++. ..|.|.|+|.+.|..|.. ...+.+.+...|+... .......++.+.|.|.+.
T Consensus 568 ~~~~~~~~~~---~~~l~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~~v~v~~~p~~~~~~~~~~~~~~G~~v~L~C~~~ 644 (816)
T 3dmk_A 568 PINRKQKVFP---NGTLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVMVLPRIIPFAFEEGPAQVGQYLTLHCSVP 644 (816)
T ss_dssp CCSTTEEECT---TSEEEESSCCHHHHCEEEEEEEEESSSCEEEEEEEEEEECCCCCBCCCCCSSCEESSCEEEEEEBCC
T ss_pred ccCCceEEec---CCeEEEEecCccccCEEEEEEEEECCCceeeeeEEEEEecCCccccccccccccCCCCeEEEEEEEe
Confidence 7766655443 3379999998 589999999999998853 3355555443332221 223356789999999996
Q ss_pred CCCCceEEEEEEEeec---CCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceEEecC
Q psy12131 166 TYSGIIQYLLKFRERE---ELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYVFATE 241 (245)
Q Consensus 166 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~~t~ 241 (245)
++++...+. |+++.. ....+....... ....+.|.++...+.+.|+|.|.|..|....+..+.+..+
T Consensus 645 ~~~~~~~i~-W~~~g~~l~~~~~~~~~~~~~--------~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~ 714 (816)
T 3dmk_A 645 GGDLPLNID-WTLDGQAISEDLGITTSRVGR--------RGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVYVP 714 (816)
T ss_dssp CSSSCCEEE-EEETTBCCCGGGTCEEEEETT--------TEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECEEEE
T ss_pred CCCCCCEEE-EEECCeEcCCCCCeeEEEcCC--------CeeEEEEccCChhhCEEEEEEEEeCCccEEEEEEEEEEeC
Confidence 554433333 444433 111121111111 1267899999999999999999999998876666655543
No 34
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.91 E-value=7.4e-23 Score=163.70 Aligned_cols=206 Identities=12% Similarity=0.089 Sum_probs=135.0
Q ss_pred ceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeec--ceEEecCCCeEEEEEEEeecCCCeEEEEECCE
Q psy12131 11 ESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEK--QWIHTAPDMRAEIICNVYANPPAKVEWFRDGT 88 (245)
Q Consensus 11 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~--~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~ 88 (245)
..|.|.+++.+|+|.|+|.|.|. .++.+.|.|..+|.+...+ ....+.+|+.+.|.|.+.|.|.|.+.|++++.
T Consensus 290 ~~L~I~~v~~~DsG~Y~C~a~N~----~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~g~ 365 (527)
T 3qs9_E 290 LFAFVSSVARNDTGYYTCSSSKH----PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRK 365 (527)
T ss_dssp EEEEESSCCGGGCEEEEEEETTE----EEEEEEEEEC--CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEEEEEETTE
T ss_pred EEEEEccCCcccCeEEEEEEEeC----CCceEEEEEEccCccccccCcccEEEcCCCeEEEEEEEEecCCCEEEEEECCE
Confidence 45999999999999999999987 5778889999888876544 34567789999999999999999999999999
Q ss_pred EeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEecCCCCccccCccccCCCeeEEEEEeCCCC
Q psy12131 89 AITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIPNIPVFQKSSRRLGPDGYRLVWQVDTYS 168 (245)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~ 168 (245)
.+....... .....|.|.++..+|.|.|+|.|.|..|.....+.|.+. .+|.+.... ....|.|.+.+.+
T Consensus 366 ~l~~~~~~~----~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~-~~P~i~~~~-----~~~~l~C~a~g~P 435 (527)
T 3qs9_E 366 SFPCEQKGL----DNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIR-RKPQVLAEA-----SASQASCFSDGYP 435 (527)
T ss_dssp EEECBCCBC----SSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC---CCCEEEECC-----CCE---EEEECSS
T ss_pred ECcCCcccc----cCCcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEe-cCCeEEEeC-----CCCEEEEEEEEEc
Confidence 886554321 134579999999999999999999999998888888776 444443332 1345799997765
Q ss_pred CceEEEEEEEeecCC---------CCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcce
Q psy12131 169 GIIQYLLKFREREEL---------TPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAY 236 (245)
Q Consensus 169 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~ 236 (245)
+. .+ .|++..... ..|...... ...........+.+..+. +.+.|+|.|.|.+|....+..+
T Consensus 436 ~p-~i-~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~L~i~~~~--d~G~Y~C~A~N~~G~~~~~~~L 506 (527)
T 3qs9_E 436 LP-SW-TWKKCSDKSPNCTEEITEGVWNRKANR--KVFGQWVSSSTLNMSEAI--KGFLVKCCAYNSLGTSCETILL 506 (527)
T ss_dssp CC-EE-EEECCC-----CCCCCCCCEEEC-----------CEEEEECCCCCSS--CSCEEEEEEECSSCEEEEEEEC
T ss_pred CC-eE-EEEECCCCcCCCccccccccceecccc--ccCCceEEEEEEEEEEcC--CCEEEEEEEEeCCCCceeEEEE
Confidence 43 22 233332100 012111100 000111122344444544 4555566699999987665544
No 35
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.91 E-value=4.5e-22 Score=167.45 Aligned_cols=214 Identities=18% Similarity=0.213 Sum_probs=160.1
Q ss_pred ecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCE
Q psy12131 9 NRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGT 88 (245)
Q Consensus 9 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~ 88 (245)
...+|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++.
T Consensus 304 ~~~~L~i~~v~~~D~G~Y~C~a~n~~g~-~~~~~~l~V~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~ 382 (816)
T 3dmk_A 304 VSGTLIIKDAVVEDSGKYLCVVNNSVGG-ESVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGK 382 (816)
T ss_dssp ETTEEEECSCCGGGCEEEEEEEECSSCE-EEEEEEEEECEEEEEEEESSEEECCTTSCEEEEEEEEEECCCEEEEEETTE
T ss_pred ccceEEECCCCHhHCEEEEEEEEcCCCc-eEEEEEEEEcCCCceeeCCCceEecCCCCEEEEEEEeccCCCEEEEEECCE
Confidence 3567999999999999999999998887 677888999888888878888888999999999999999999999999998
Q ss_pred EeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEec--CCCCccccC---ccccCCCeeEEEEE
Q psy12131 89 AITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGI--PNIPVFQKS---SRRLGPDGYRLVWQ 163 (245)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~--~~~p~~~~~---~~~~~~~~~~l~~~ 163 (245)
.+... ...|.|.++..+|.|.|+|.+.|..|.......+.+. ..||.+... .....+..+.|.|.
T Consensus 383 ~~~~~----------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~p~i~~~~~~~~v~~G~~v~L~C~ 452 (816)
T 3dmk_A 383 AIGHS----------ESVLRIESVKKEDKGMYQCFVRNDRESAEASAELKLGGRFDPPVIRQAFQEETMEPGPSVFLKCV 452 (816)
T ss_dssp ECSCC----------SSEEEESSCCGGGCEEEEEEEECSSCEEEECCEEECCCSSCCCEEEEECCCEEECSSSCEEEEEE
T ss_pred ECCCC----------CCEEEEcCCCHHHCEEEEEEEECCCCcEEEEEEEEEccccCCCceEecCcceEEcCCCCEEEEEE
Confidence 87643 2369999999999999999999999877776666553 345544332 23467889999999
Q ss_pred eCCCCCceEEEEEEEeec---CCCCeEE-EeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceEEe
Q psy12131 164 VDTYSGIIQYLLKFRERE---ELTPWRN-IVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYVFA 239 (245)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~~ 239 (245)
+.+.++. .+ .|+++.. ....+.. ....... .....+.|..+...+.+.|+|.|.|..|....+..+.+.
T Consensus 453 ~~g~p~p-~v-~W~~~g~~l~~~~~~~~~~~~~~~~-----~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 525 (816)
T 3dmk_A 453 AGGNPTP-EI-SWELDGKKIANNDRYQVGQYVTVNG-----DVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVY 525 (816)
T ss_dssp EECSSCC-EE-EEEETTEECCSCTTEEEEEEECTTS-----CEEEEEEESSCCTTTCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EecCCCC-EE-EEEECCEECCCCCCcccccEEecCC-----CcEEEEEEeeccccCCEEEEEEEEECCCeEEEEEEEEEe
Confidence 9766443 22 2444332 1111111 0011111 122468899999999999999999999987666666554
Q ss_pred c
Q psy12131 240 T 240 (245)
Q Consensus 240 t 240 (245)
.
T Consensus 526 ~ 526 (816)
T 3dmk_A 526 G 526 (816)
T ss_dssp S
T ss_pred c
Confidence 3
No 36
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.90 E-value=2.3e-22 Score=151.41 Aligned_cols=223 Identities=16% Similarity=0.154 Sum_probs=138.0
Q ss_pred ecceEEEeccCCCCCEEEEEEEEcCCC----CceeeEEEEEEec---CCeEEeecceEEecCCCeEEEEEEEeecCCCeE
Q psy12131 9 NRESLDLDRVTLKLAGLYQCIASNNIG----ESTSKNFIVNVIY---PPEVSVEKQWIHTAPDMRAEIICNVYANPPAKV 81 (245)
Q Consensus 9 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~----~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~ 81 (245)
....|.|.+++.+|+|.|+|.|.+..+ ...+..+.|.|.. +|.+...+... +.+|+.+.|.|.+. .+.+.+
T Consensus 72 ~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~~~~~~~~~-v~~G~~v~L~C~~~-~~~~~~ 149 (316)
T 3vh8_G 72 FQESFNMSPVTTAHAGNYTCRGSHPHSPTGWSAPSNPVVIMVTGNHRKPSLLAHPGPL-VKSGERVILQCWSD-IMFEHF 149 (316)
T ss_dssp BSSCEEECSCCGGGCEEEEEEEBCSSSSSSBCCCCCCEEEEEECSSCCCEEEEESCSE-EETTCCEEEEEEES-SCCSEE
T ss_pred ceEEEEECCCCcccCeEEEEEEEcCCCCcceecCCCcEEEEEecCCCCCeEEecCCCc-cCCCCeEEEEEcCC-CCCcEE
Confidence 345699999999999999999986432 1245677788864 46666555444 78999999999994 566789
Q ss_pred EEEECCEEeccCCcE-EEEecCceeEEEEccCCCCCCeEEEEEEEeCCce-------eEEEEEEEecCCCCccccC--cc
Q psy12131 82 EWFRDGTAITLGGRI-DMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGS-------SQQFIQLSGIPNIPVFQKS--SR 151 (245)
Q Consensus 82 ~w~~~~~~~~~~~~~-~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~-------~~~~~~~~~~~~~p~~~~~--~~ 151 (245)
.|++++..+...... ..........|.|.++..+|.|.|+|.+.|..|. ....+.+...+.+|.+... ..
T Consensus 150 ~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~~~~~~ 229 (316)
T 3vh8_G 150 FLHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQPGPK 229 (316)
T ss_dssp EEEETTCCSCCEEEECEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEEESCSC
T ss_pred EEEECCCccccceeeeeecCCCceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeEEeCCCCe
Confidence 999988765432111 1112224568999999999999999999998763 2234444443445544332 24
Q ss_pred ccCCCeeEEEEEeCCCCCceEEEEEEEeecCCCCeEEE-eeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCC-
Q psy12131 152 RLGPDGYRLVWQVDTYSGIIQYLLKFREREELTPWRNI-VIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGW- 229 (245)
Q Consensus 152 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~- 229 (245)
...++.+.|.|.+....+ .| .|+++.. ....... ..... ......|.|..+. +.+.|+|.|.|..+.
T Consensus 230 v~~G~~v~L~C~~~~~~~--~~-~W~k~g~-~~~~~~~~~~~~~-----~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~~ 298 (316)
T 3vh8_G 230 VQAGESVTLSCSSRSSYD--MY-HLSREGG-AHERRLPAVRKVN-----RTFQADFPLGPAT--HGGTYRCFGSFRHSPY 298 (316)
T ss_dssp CCTTSCCEEEEEESSCCS--EE-EEEETTS-SCCEEEECEECTT-----SCEEEEEECC-------CEEEEEEEBTTBTT
T ss_pred ecCCCcEEEEEECCCCCc--EE-EEEECCC-cCCCceeceeccC-----CceeEEEEcCCcC--CCEEEEEEeecCCCch
Confidence 577899999999964322 33 3555533 1111111 01111 1122568888888 666777779998774
Q ss_pred --CCCCcceEEecCCCC
Q psy12131 230 --SRPSKAYVFATEGAE 244 (245)
Q Consensus 230 --~~~s~~~~~~t~~~~ 244 (245)
+..|..+.+...+.|
T Consensus 299 ~~s~~S~~~~l~V~g~p 315 (316)
T 3vh8_G 299 EWSDPSDPLLVSVTGNP 315 (316)
T ss_dssp EECCCCCCEEC------
T ss_pred hccCCCCcEEEEEeCCC
Confidence 677888877766554
No 37
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.90 E-value=9.8e-23 Score=157.86 Aligned_cols=217 Identities=15% Similarity=0.153 Sum_probs=146.8
Q ss_pred ceEEEeecceEEEeccCCCCCE---EEEEEEEcCCCCceeeEEE---EEEec----------CCeEEeecceEEecCCCe
Q psy12131 3 EIELLYNRESLDLDRVTLKLAG---LYQCIASNNIGESTSKNFI---VNVIY----------PPEVSVEKQWIHTAPDMR 66 (245)
Q Consensus 3 ~~~~~~~~~~L~i~~~~~~d~G---~Y~C~~~~~~~~~~~~~~~---l~v~~----------~p~~~~~~~~~~~~~g~~ 66 (245)
|+.+..+ ..|.|.+++.+|+| .|+|.+.|..+.. ..... +.+.. +|.+ .+....+..|+.
T Consensus 154 ~~~~~~~-~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~G~~ 229 (395)
T 1bih_A 154 RITAGPD-GNLYFTIVTKEDVSDIYKYVCTAKNAAVDE-EVVLVEYEIKGVTKDNSGYKGEPVPQY--VSKDMMAKAGDV 229 (395)
T ss_dssp TEEECTT-SCEEEEEECGGGCCSSEEEEEEEECTTCSS-CEEEEEEEECCCBCCSSCCCCCCEEEE--ECCSEEEETTSC
T ss_pred cEEEcCC-CcEEEEEEeeccCCCceEEEEEEEecccce-EEEeeeEEecccccccccccCCcCcee--cCCceEEECCCc
Confidence 4444444 45999999999999 9999999988763 22221 11111 2222 344566789999
Q ss_pred EEEEEEEeecCCCeEEEEECCEEeccCCcEEEE--ecCceeEEEEccCCCCCCeEEEEEEEeCCceeEE-EEEEEecCCC
Q psy12131 67 AEIICNVYANPPAKVEWFRDGTAITLGGRIDMH--VSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQ-FIQLSGIPNI 143 (245)
Q Consensus 67 ~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~--~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~-~~~~~~~~~~ 143 (245)
+.|.|.+.|.|.+.+.|++++..+.......+. .......|.|.++..+|.|.|+|.+.|..|.... .+.|.+.. +
T Consensus 230 v~l~C~~~g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~-~ 308 (395)
T 1bih_A 230 TMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVS-A 308 (395)
T ss_dssp EEEEEEEECSSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEE-E
T ss_pred EEEEEEeccCCCCeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEEc-C
Confidence 999999999999999999999887654322222 2223347999999999999999999999887544 55555542 2
Q ss_pred CccccC----ccccCCCeeEEEEEeCCCCCceEEEEEEEeec-CCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEE
Q psy12131 144 PVFQKS----SRRLGPDGYRLVWQVDTYSGIIQYLLKFRERE-ELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYE 218 (245)
Q Consensus 144 p~~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~ 218 (245)
|.+... .....++.+.|.|.+.+.++.. ..|+++.. ..... +... ...+.|.++...+.+.
T Consensus 309 P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~--v~W~~~g~~~~~~~--~~~~----------~~~L~i~~~~~~d~G~ 374 (395)
T 1bih_A 309 PKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPN--VVWSHNAKPLSGGR--ATVT----------DSGLVIKGVKNGDKGY 374 (395)
T ss_dssp EEEEECCCSEEEECTTSCEEEECEEEEESCCC--CEEEETTEECCSSS--EEEE----------TTEEEESSCCSTTCEE
T ss_pred CccccCCCcceEecCCCeEEEEEEECcccCCe--eEEEECCEECCCCc--eEEE----------CCEEEEeeCCcccCEE
Confidence 222211 2346788999999996654332 23444433 11111 1111 1368899999999999
Q ss_pred EEEEEEecCCCCCCCcceEE
Q psy12131 219 ASVLAKNRFGWSRPSKAYVF 238 (245)
Q Consensus 219 ~~v~a~N~~G~~~~s~~~~~ 238 (245)
|+|.|.|..|....+..+.|
T Consensus 375 Y~C~a~N~~G~~~~~~~l~V 394 (395)
T 1bih_A 375 YGCRATNEHGDKYFETLVQV 394 (395)
T ss_dssp EEEEEEETTEEEEEEEEEEE
T ss_pred EEEEEEccCCCceEEEEEEE
Confidence 99999999998766555544
No 38
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.90 E-value=4e-22 Score=159.95 Aligned_cols=218 Identities=15% Similarity=0.136 Sum_probs=142.1
Q ss_pred ceEEEeccCCCCCEEEEEEEEcCCCCc--eeeEEEEEE----ecCCeEEeecceEEecCCCeEEEEEEEeecCCC--eEE
Q psy12131 11 ESLDLDRVTLKLAGLYQCIASNNIGES--TSKNFIVNV----IYPPEVSVEKQWIHTAPDMRAEIICNVYANPPA--KVE 82 (245)
Q Consensus 11 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~~~l~v----~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~--~~~ 82 (245)
..|.|.+++.+|+|.|+|.|.|..|.. ....+.|.| ..+|.+...+....+..|+.+.|.|.+.|.+++ .+.
T Consensus 70 ~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~ 149 (523)
T 2rcj_C 70 ASLAISGLEAEDESDYYCASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVA 149 (523)
T ss_pred EEEEECCCChhhCEEEEEEEccCCCccccccCceEEEeccCCCcCCeEEecCCcccccCCCceEEEEEeccccCCceEEE
Confidence 469999999999999999999976531 234567777 356777666655566789999999999988764 899
Q ss_pred EEECCEEeccCCcEEEE---ecCc---eeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEe---cCCCCcccc---Cc
Q psy12131 83 WFRDGTAITLGGRIDMH---VSSE---KHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSG---IPNIPVFQK---SS 150 (245)
Q Consensus 83 w~~~~~~~~~~~~~~~~---~~~~---~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~---~~~~p~~~~---~~ 150 (245)
|++++..+......... ..+. .+.|.|..+..+|.|.|+|.+.|..|.....+.+.. ...+|.+.. ..
T Consensus 150 W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~~~~~~ 229 (523)
T 2rcj_C 150 WKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECSASTKGPSVFPLAPSS 229 (523)
T ss_pred EecCCCCCCCceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccceeeeecCCCCcCCEEEecCCCc
Confidence 99999877644322111 1111 246999999999999999999999887666555432 123333221 12
Q ss_pred cccCCCeeEEEEEeCCC-CCceEEEEEEEeecCCC--CeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecC
Q psy12131 151 RRLGPDGYRLVWQVDTY-SGIIQYLLKFREREELT--PWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRF 227 (245)
Q Consensus 151 ~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~ 227 (245)
....++.+.|.|.+.+. ++...+ .|+++..... ...... ...+ .......+.|..+...+ +.|+|.|.|..
T Consensus 230 ~~~~G~~~~l~C~~~g~~P~p~~v-~W~k~g~~~~~~~~~~~~-~~~g---~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~ 303 (523)
T 2rcj_C 230 KSTSGGTAALGCLVKDYFPQPVTV-SWNSGALTSGVHTFPAVL-QSSG---LYSLSSVVTVPSSSLGT-QTYICNVNHKP 303 (523)
T ss_pred ccccCCceEEEEEEeceeCCCeEE-EEecCCcccceEeCCcEe-cCCC---cEEEEEEEEechhhcCC-ceEEEEEEeCC
Confidence 34678999999999665 322222 3444432100 000010 0110 00112467888887777 88888899999
Q ss_pred CCCCCCc
Q psy12131 228 GWSRPSK 234 (245)
Q Consensus 228 G~~~~s~ 234 (245)
|....+.
T Consensus 304 g~~~~~~ 310 (523)
T 2rcj_C 304 SNTKVDK 310 (523)
T ss_pred CCcceEE
Confidence 9754433
No 39
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.90 E-value=5.3e-22 Score=165.07 Aligned_cols=218 Identities=18% Similarity=0.156 Sum_probs=157.6
Q ss_pred EEEecc-CCCCCEEEEEEEEcCCCCceeeEEEEEEe---cCCeEEeecceEEecCCCeEEEEEEEeecCCCeEE-EE--E
Q psy12131 13 LDLDRV-TLKLAGLYQCIASNNIGESTSKNFIVNVI---YPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVE-WF--R 85 (245)
Q Consensus 13 L~i~~~-~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~---~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~-w~--~ 85 (245)
|.|..+ ....++.|.|.+.+..|......+.+.+. .+|.+. .+....+..|+.+.|.|.+.|.|.|.+. |+ +
T Consensus 125 ~~i~~~~~~~~~l~~~~va~~~~G~~~~~~v~~~~~~~~~~p~~~-~~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~ 203 (731)
T 2v5y_A 125 LAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGHPCTRTPHFL-RIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGI 203 (731)
T ss_dssp EEECCCTTSCEEEEEEEEECSSCCEEEECCBEEESSCCSSSCEEC-CCCCEEEETTSCEEEEEEEESCCCTTCEEEEEES
T ss_pred EEEeecCCCceEEEEEEEecCCceEEEEeeEEeeecccccccccc-cccceEEeCCCcEEEEEEeCCCCCCceeEEEecC
Confidence 555554 23345899998888777644333433332 567766 4456788999999999999999999887 88 6
Q ss_pred CCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCce-eEE--EEEEEecCCCCccccCccccCCCeeEEEE
Q psy12131 86 DGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGS-SQQ--FIQLSGIPNIPVFQKSSRRLGPDGYRLVW 162 (245)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~-~~~--~~~~~~~~~~p~~~~~~~~~~~~~~~l~~ 162 (245)
++..+.......+......+.|.|.++...|.|.|+|.|.|..|. ... .+.+...|.+|...... ......+.|.|
T Consensus 204 ~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~n~~G~~~s~~~~l~V~~~P~~~~~p~~~-~~~~~~v~l~w 282 (731)
T 2v5y_A 204 DVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVKEPPVPIAPPQLA-SVGATYLWIQL 282 (731)
T ss_dssp SSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEEEEEEEEETTEEEECCCEEEEEECCCCBSSCCEEE-EECSSCEEEEC
T ss_pred CCccccccceEEeccccceEEEEEcccccccCeEEEEEEECCCCCcceeeEEEEEecCCCCCCCccee-ccCCceEEEEe
Confidence 776654332111111223468999999999999999999999987 444 34444445444333222 34567899999
Q ss_pred Ee---CCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEE--ecCCCCCCCcceE
Q psy12131 163 QV---DTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAK--NRFGWSRPSKAYV 237 (245)
Q Consensus 163 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~--N~~G~~~~s~~~~ 237 (245)
.+ +++.++..|.++|+.. ...|..+..... ..+.|.+|.+++.|.|+|.|. |..|.+.+|..+.
T Consensus 283 ~~~~~~g~~~i~~Y~v~~~~~--~~~~~~~~~~~~---------~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~ 351 (731)
T 2v5y_A 283 NANSINGDGPIVAREVEYCTA--SGSWNDRQPVDS---------TSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALR 351 (731)
T ss_dssp CCSSBSSCSCCCEEEEEEEES--SSSCEEEEECCS---------SEEEECSCCTTCEEEEEEEEECSSTTCSCCBCCCEE
T ss_pred CCcccCCCCccEEEEEEEEEC--CCCceEEeccCc---------ceEEEeCCCCCCEEEEEEEEEecCCCccccCCCcEE
Confidence 97 3457899999999884 567876654332 679999999999999999999 9999999999998
Q ss_pred EecCCC
Q psy12131 238 FATEGA 243 (245)
Q Consensus 238 ~~t~~~ 243 (245)
++|.+.
T Consensus 352 ~~t~~~ 357 (731)
T 2v5y_A 352 TRTKCA 357 (731)
T ss_dssp EECCCC
T ss_pred eeecCC
Confidence 888764
No 40
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.90 E-value=4.5e-23 Score=160.18 Aligned_cols=223 Identities=17% Similarity=0.185 Sum_probs=151.7
Q ss_pred ceEEEeecceEEEecc-----CCCCCEEEEEEEEcCC-CCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeec
Q psy12131 3 EIELLYNRESLDLDRV-----TLKLAGLYQCIASNNI-GESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYAN 76 (245)
Q Consensus 3 ~~~~~~~~~~L~i~~~-----~~~d~G~Y~C~~~~~~-~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~ 76 (245)
|+....+ ..|.|.++ +.+|+|.|+|.+.+.. +...+..+.|.|..+|.+...+....+.+|+.+.|.|.+.+.
T Consensus 70 ~~~~~~~-~~l~i~~~~~~~~~~~D~G~Y~C~~~~~~~~~~~s~~~~l~v~~p~~~~~~~~~~~~~~G~~v~l~C~~~~~ 148 (403)
T 3laf_A 70 RKQQLPN-GSLLIQNILHSRHHKPDEGLYQCEASLGDSGSIISRTAKVMVAGPLRFLSQTESITAFMGDTVLLKCEVIGD 148 (403)
T ss_dssp TEEECTT-SCEEECSCCCBTTBCSSCEEEEEEEECGGGCEEECCCEEEEECCCCEECSCCCCEEEETTSCEEECCCEECS
T ss_pred cEEEecC-CcEEEeeeeccCCCCCcceEEEEEEEeCCCccEEEEEEEEEecCCCccccCCCcEEEEcCCeEEEEEEEccc
Confidence 3444433 44888888 6779999999999653 333466788888888888777777888999999999999999
Q ss_pred CCCeEEEEECCEEecc---CCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeE---EEEEEEecCCCCc---cc
Q psy12131 77 PPAKVEWFRDGTAITL---GGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQ---QFIQLSGIPNIPV---FQ 147 (245)
Q Consensus 77 ~~~~~~w~~~~~~~~~---~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~---~~~~~~~~~~~p~---~~ 147 (245)
|.+.+.|++++..+.. ..+.... ....|.|.++..+|.|.|+|.+.|..|... ..+.+...|..+. +.
T Consensus 149 p~~~v~W~~~~~~~~~~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~ 225 (403)
T 3laf_A 149 PMPTIHWQKNQQDLNPIPGDSRVVVL---PSGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFL 225 (403)
T ss_dssp SCCEEEEEESSSBCCCCTTCCSEEEC---TTSCEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEE
T ss_pred CCCeEEEEECCEeccccCCceEEEEc---CCceEEEcccccccCEEEEEEEEcCCCceeccceeEEEecCCCcccCceEe
Confidence 9999999999877642 2222222 234799999999999999999999876532 3344443332221 11
Q ss_pred c---CccccCCCeeEEEEEeCCCCCceEEEEEEEeec-CCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEE
Q psy12131 148 K---SSRRLGPDGYRLVWQVDTYSGIIQYLLKFRERE-ELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLA 223 (245)
Q Consensus 148 ~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a 223 (245)
. ......++.+.|.|.+.+.++. .+ .|+++.. ............ ...+.|.++...+.+.|+|.|
T Consensus 226 ~~~~~~~~~~g~~~~l~C~~~~~p~~-~~-~W~~~~~~~~~~~~~~~~~~---------~~~L~i~~~~~~d~G~Y~C~a 294 (403)
T 3laf_A 226 QRPSNVIAIEGKDAVLECCVSGYPPP-SF-TWLRGEEVIQLRSKKYSLLG---------GSNLLISNVTDDDSGTYTCVV 294 (403)
T ss_dssp ECCCCEEEETTSCEEECCEEEEESCC-EE-EEEETTEECCCSSSSEEEET---------TTEEEECSCCGGGCEEEEEEE
T ss_pred cCCCceEecCCCcEEEEEEcCCCCCC-eE-EEEECCeeccCCCceEEECC---------ccEEEEeCCCHHHCEEEEEEE
Confidence 1 1234578899999999765443 22 3444432 000000011111 146889999999999999999
Q ss_pred EecCCCCCCCcceEEec
Q psy12131 224 KNRFGWSRPSKAYVFAT 240 (245)
Q Consensus 224 ~N~~G~~~~s~~~~~~t 240 (245)
.|..|....+..+.+..
T Consensus 295 ~n~~g~~~~~~~l~V~~ 311 (403)
T 3laf_A 295 TYKNENISASAELTVLV 311 (403)
T ss_dssp EETTEEEEEEEEEEEEE
T ss_pred EcCCCceEEEEEEEEEC
Confidence 99998766655555543
No 41
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.90 E-value=3.2e-23 Score=160.98 Aligned_cols=224 Identities=14% Similarity=0.183 Sum_probs=150.8
Q ss_pred ceEEEeecceEEEeccCCCC-CEEEEEEEEcCCCCc--eeeEEEEEEec-------CCeEEeec---ceEEecCCCeEEE
Q psy12131 3 EIELLYNRESLDLDRVTLKL-AGLYQCIASNNIGES--TSKNFIVNVIY-------PPEVSVEK---QWIHTAPDMRAEI 69 (245)
Q Consensus 3 ~~~~~~~~~~L~i~~~~~~d-~G~Y~C~~~~~~~~~--~~~~~~l~v~~-------~p~~~~~~---~~~~~~~g~~~~l 69 (245)
++.+.. +..|.|.+++..| .|.|+|.+.|..+.. ....+.|.|.. +|.+.... ....+..|+.+.|
T Consensus 164 ~~~~~~-~~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l 242 (404)
T 3p3y_A 164 RVSQGH-NGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLL 242 (404)
T ss_dssp SEEECT-TSCEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEE
T ss_pred cEEEcC-CCcEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEE
Confidence 344433 3459999999999 599999999987753 22335566653 23332221 2355778999999
Q ss_pred EEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEecCCCCcccc-
Q psy12131 70 ICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIPNIPVFQK- 148 (245)
Q Consensus 70 ~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~~~p~~~~- 148 (245)
.|.+.+.|.+.+.|++++..+..... ... .....|.|.++..+|.|.|+|.+.|..|.....+.+.+...|.....
T Consensus 243 ~C~~~g~p~~~v~W~~~~~~~~~~~~-~~~--~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~ 319 (404)
T 3p3y_A 243 ECIASGVPTPDIAWYKKGGDLPSDKA-KFE--NFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEP 319 (404)
T ss_dssp ECCBCCSSCCEEEEEETTBCCCTTTE-EEE--GGGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEECC
T ss_pred EEEECCCCCCcEEEEECCEECCCCcc-ccc--ccCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeCCCeeeccC
Confidence 99999999999999999988765543 221 23458999999999999999999999998888777776533322111
Q ss_pred -CccccCCCeeEEEEEeCCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecC
Q psy12131 149 -SSRRLGPDGYRLVWQVDTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRF 227 (245)
Q Consensus 149 -~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~ 227 (245)
......++.+.|.|.+.+.++. .+ .|+++.. .+...... .........+.|.++...+.+.|+|.|.|..
T Consensus 320 ~~~~v~~g~~~~l~C~~~g~p~p-~v-~W~~~g~------~~~~~~~~-~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~ 390 (404)
T 3p3y_A 320 KNLILAPGEDGRLVCRANGNPKP-TV-QWMVNGE------PLQSAPPN-PNREVAGDTIIFRDTQISSRAVYQCNTSNEH 390 (404)
T ss_dssp CCEEECTTCCEEEECEEEEESCC-EE-EEEETTE------EGGGSCCC-TTEEEETTEEEESSCCSSCCCEEEEEEEETT
T ss_pred CcceeecCCcEEEEEEccccCCC-ce-EEEECCE------ecCCCCCC-ceEEecCCEEEEeecCHHHCEEEEEEEEeCC
Confidence 1234568899999999766443 22 3444432 00000000 0000111468899999888999999999999
Q ss_pred CCCCCCcceEEe
Q psy12131 228 GWSRPSKAYVFA 239 (245)
Q Consensus 228 G~~~~s~~~~~~ 239 (245)
|....+..+.+.
T Consensus 391 G~~~~~~~l~V~ 402 (404)
T 3p3y_A 391 GYLLANAFVSVL 402 (404)
T ss_dssp EEEEEEEEEEEC
T ss_pred CcEEEEEEEEEE
Confidence 988766665553
No 42
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.90 E-value=5.4e-23 Score=144.64 Aligned_cols=124 Identities=15% Similarity=0.158 Sum_probs=100.2
Q ss_pred cceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEE
Q psy12131 10 RESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTA 89 (245)
Q Consensus 10 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~ 89 (245)
...|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|..||.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..
T Consensus 68 ~~~L~I~~v~~~D~G~Y~C~a~n~~g~-~~~~~~l~V~~p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~ 146 (203)
T 4fa8_A 68 TFFLVVTAANISHDGNYLCRMKLGETE-VTKQEHLSVVKPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGV 146 (203)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEETTEE-EEEEEEEEEEEEEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC---
T ss_pred EEEEEEccCCHHHCeEEEEEEEcCCCc-EEEEEEEEecCCceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCee
Confidence 456999999999999999999998877 6788999999999888888777888999999999999999999999886543
Q ss_pred ec----cCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEE
Q psy12131 90 IT----LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQF 134 (245)
Q Consensus 90 ~~----~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~ 134 (245)
+. ...++.+..++.-..+.+.++..+|.|.|+|.|.|..|.....
T Consensus 147 ~~~~~~~~~r~~~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~v 195 (203)
T 4fa8_A 147 EPAPTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHGV 195 (203)
T ss_dssp ---------CCEECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEEE
T ss_pred ecCcccccceEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEEE
Confidence 32 2334455445544566778899999999999999999987764
No 43
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.90 E-value=5e-22 Score=139.04 Aligned_cols=134 Identities=22% Similarity=0.297 Sum_probs=114.8
Q ss_pred EEEeecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEe---cCCeEEeecceEEecCCCeEEEEEEEeecCCCeE
Q psy12131 5 ELLYNRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVI---YPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKV 81 (245)
Q Consensus 5 ~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~---~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~ 81 (245)
....+...|.|.+++.+|+|.|+|.+.+..+. ....+.|.|. .+|.+...+....+..|+.+.|.|.+.+.|.|.+
T Consensus 57 ~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~-~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v 135 (194)
T 2a38_A 57 SFSDGRAKLTIPAVTKANSGRYSLKATNGSGQ-ATSTAELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVV 135 (194)
T ss_dssp EEETTEEEEEESSCCGGGCEEEEEEEEETTEE-EEEEEEEEEECCCEEEEEEECCCCEEECTTEEEEEEEEEEEESCCEE
T ss_pred EeCCCEEEEEECCCCcccCEEEEEEEEcCCce-EeEEEEEEEccCCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeE
Confidence 34444567999999999999999999998776 5667778887 5677766676777889999999999999999999
Q ss_pred EEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEe
Q psy12131 82 EWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSG 139 (245)
Q Consensus 82 ~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~ 139 (245)
.|++++..+....++.+...+....|.|.++..+|.|.|+|.+.|..|.....+.|.+
T Consensus 136 ~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 193 (194)
T 2a38_A 136 KFYRDGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATSTAELLV 193 (194)
T ss_dssp EEEETTEECCCSSSEEEEEETTEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEECCEECCCCCcEEEEEcCCEEEEEECCCChhcCeEEEEEEEeCCCceEEEEEEEE
Confidence 9999999998877777777777778999999999999999999999999888877765
No 44
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.90 E-value=3.5e-22 Score=155.87 Aligned_cols=203 Identities=10% Similarity=-0.002 Sum_probs=123.2
Q ss_pred eEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEec
Q psy12131 12 SLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAIT 91 (245)
Q Consensus 12 ~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~ 91 (245)
+|.|.+++.+|+|.|+|.|.|..|. ....+.|.|..+|.+..... .....|..+.|.|.+.|.|.|.+.|++++....
T Consensus 104 sL~I~~v~~~D~G~Y~C~a~N~~g~-~~~~~~l~V~~~p~~~~~~p-~~~~~~~~~~L~C~a~G~P~P~i~W~k~~~~~~ 181 (423)
T 3qs7_E 104 SMVILKMTETQAGEYLLFIQSEATN-YTILFTVSIRNTLLYTLRRP-YFRKMENQDALVCISESVPEPIVEWVLCDSQGE 181 (423)
T ss_dssp EEEESSCCSSSCSEEEEEEEC--CE-EEEEEEEEEC-----CEEEE-EEEECSSSSCEEEEEEESSCCEEEEEEC-----
T ss_pred EEEEeecCcccCEEEEEEEEcCCCc-EEEEEEEEEecCccccccCC-cEeccCCceEEEEEEeeecCCeEEEEECCCCCc
Confidence 5999999999999999999999887 67788899987776532222 234567788899999999999999999876543
Q ss_pred cCCc---EEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEE-EEEEEecCCCCccccCccccCCCeeEEEEEeCCC
Q psy12131 92 LGGR---IDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQ-FIQLSGIPNIPVFQKSSRRLGPDGYRLVWQVDTY 167 (245)
Q Consensus 92 ~~~~---~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~ 167 (245)
.... ..+... ... +...|.|.|.|.|.|..|.... .+.+.+...|...........++.+.|.|.+.+.
T Consensus 182 ~~~~~~~~~~~~~--~~~-----l~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~~~~~~~v~~G~~v~L~C~~~g~ 254 (423)
T 3qs7_E 182 SCKEESPAVVKKE--EKV-----LHELFGTDIRCCARNELGRECTRLFTIDLNQTPQTTLPQLFLKVGEPLWIRCKAVHV 254 (423)
T ss_dssp --------CEEEC--CSE-----ECCCCSSCEEEEEECSSCEEEEECEEEESSSCCCSSTTEEEEETTSCEEEEEEEEES
T ss_pred ccccccccccccc--ceE-----EecccCeEEEEEEEcCCCCcceeeEEEEEecCCccCCCceEEeCCCeEEEEEEEEcC
Confidence 2110 001000 011 1567999999999999987654 3566665443332223345779999999999763
Q ss_pred CCceEEEEEEEeec-C-CCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEec
Q psy12131 168 SGIIQYLLKFRERE-E-LTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNR 226 (245)
Q Consensus 168 ~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~ 226 (245)
.|...+ .|+++.. . ............. ........+.|.++...+.+.|+|.|.|.
T Consensus 255 ~p~p~i-~W~k~g~~l~~~~~~~~~~~~~~--~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~ 312 (423)
T 3qs7_E 255 NHGFGL-TWELENKALEEGNYFEMSTYSTN--RTMIRILFAFVSSVARNDTGYYTCSSSKH 312 (423)
T ss_dssp SSCCCE-EEEESSSBCCGGGEEEEEEEETT--TEEEEEEEEEESSCCTTTCEEEEEEETTE
T ss_pred CCCcEE-EEEECCEEccccceeecccccCC--ceeEEEEEEEEeecCHHHCEEEEEEEecC
Confidence 222122 2444433 1 1101100000000 00112246899999999999999999998
No 45
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.90 E-value=5.6e-23 Score=156.16 Aligned_cols=224 Identities=12% Similarity=0.066 Sum_probs=150.2
Q ss_pred eecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEE--eecceEEecCCCeEEEEEE-----EeecCCCe
Q psy12131 8 YNRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVS--VEKQWIHTAPDMRAEIICN-----VYANPPAK 80 (245)
Q Consensus 8 ~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~--~~~~~~~~~~g~~~~l~C~-----~~~~~~~~ 80 (245)
..+..|.|.+++.+|+|.|+|.+.|..|. ....+.|.|..+|... .......+..|+.+.|.|. +.+.|.+.
T Consensus 78 ~~~~~L~i~~v~~~D~G~Y~C~~~n~~g~-~~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~ 156 (339)
T 3o4o_C 78 AQDGALWLLPALQEDSGTYVCTTRNASYC-DKMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVK 156 (339)
T ss_dssp EETTEEEESSBCTTCCEEEECCEEETTEE-EEEEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCC
T ss_pred eeCCeEEECCCCcccCEEEEEEEECCcce-EEEEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCce
Confidence 34567999999999999999999998775 6788888988766532 1122346779999999999 78888999
Q ss_pred EEEEECCEEeccC-CcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCc----eeEEEEEEEecCC----CCccccC--
Q psy12131 81 VEWFRDGTAITLG-GRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLG----SSQQFIQLSGIPN----IPVFQKS-- 149 (245)
Q Consensus 81 ~~w~~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g----~~~~~~~~~~~~~----~p~~~~~-- 149 (245)
+.|++++..+... .++.+. .....|.|.++...|.|.|+|.+.|..| .....+.+.+... +|.+...
T Consensus 157 v~W~k~g~~~~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~~~~ 234 (339)
T 3o4o_C 157 IQWYKDSLLLDKDNEKFLSV--RGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPLK 234 (339)
T ss_dssp BCCEESSCBCCTTCSSEEEC--TTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEECCCSC
T ss_pred EEEecCCeeCCCCCceeEEc--CCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEecCCc
Confidence 9999999887655 333332 2235899999999999999999999876 3445555655422 3433332
Q ss_pred -ccccCCCeeEEEEEe---CCCCCceEEEEEEEeecC-C-----CCeEE---EeeCCCCCCCcceeeeEEEecCCCCCce
Q psy12131 150 -SRRLGPDGYRLVWQV---DTYSGIIQYLLKFREREE-L-----TPWRN---IVIPSDGSLAGPIYTQSYNITGLQLFTQ 216 (245)
Q Consensus 150 -~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~-~-----~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~~~~ 216 (245)
.....++.+.|.|.+ .+.++... ..|+++... . ..... ...... ........+.|.++...+.
T Consensus 235 ~~~v~~G~~v~L~C~~~~~~g~P~~~~-v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~L~i~~v~~~d~ 310 (339)
T 3o4o_C 235 TISASLGSRLTIPCKVFLGTGTPLTTM-LWWTANDTHIESAYPGGRVTEGPRQEYSEN---NENYIEVPLIFDPVTREDL 310 (339)
T ss_dssp CCCCCCCSCCCCCCCEEESSSCCSSCE-EEEESSSSCSSSSSCSSSCEECCCEECCCS---SSCEEEECCEECSSCCCSC
T ss_pred eeEeccCCCEEEEEEEECCCCCCCCce-EEEEECCeecccccccccceecceEEeccc---CceEEEEEEEEEEechhhc
Confidence 234668899999999 66652322 223333220 0 00110 001101 0111122688888888886
Q ss_pred -EEEEEEEEecCCCCCCCcceEE
Q psy12131 217 -YEASVLAKNRFGWSRPSKAYVF 238 (245)
Q Consensus 217 -y~~~v~a~N~~G~~~~s~~~~~ 238 (245)
+.|+|.|.|.+|.......+.+
T Consensus 311 ~G~Y~C~a~N~~G~~~~~~~~~~ 333 (339)
T 3o4o_C 311 HMDFKCVVHNTLSFQTLRTTVKE 333 (339)
T ss_dssp CCCCEEEEEETTEEECCBCCCCC
T ss_pred CccEEEEEEeccCceEEEEEhhH
Confidence 7778889999998776655443
No 46
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.90 E-value=9.5e-23 Score=157.61 Aligned_cols=212 Identities=12% Similarity=0.138 Sum_probs=143.6
Q ss_pred ceEEEeecceEEEeccCCCCC-EEEEEEEEcCCCCcee---eEEEEEEecCC-----eEEe-ecceEEecCCCeEEEEEE
Q psy12131 3 EIELLYNRESLDLDRVTLKLA-GLYQCIASNNIGESTS---KNFIVNVIYPP-----EVSV-EKQWIHTAPDMRAEIICN 72 (245)
Q Consensus 3 ~~~~~~~~~~L~i~~~~~~d~-G~Y~C~~~~~~~~~~~---~~~~l~v~~~p-----~~~~-~~~~~~~~~g~~~~l~C~ 72 (245)
|+.+..+ ..|.|.+++.+|+ |.|+|.+.+..+.... ....|.|..++ .+.. ......+..|+.+.|.|.
T Consensus 157 ~~~~~~~-~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~ 235 (388)
T 2v5m_A 157 KYLVLPS-GELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCP 235 (388)
T ss_dssp TEEECTT-SCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCCCCEEEETTSCEEECCC
T ss_pred cEEEccC-CcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccccCCceEEeeCCcEEEEEE
Confidence 4444433 4699999999999 9999999987644221 12345665542 2111 122345678999999999
Q ss_pred EeecCCCeEEEEECCEE------eccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEecCCCCcc
Q psy12131 73 VYANPPAKVEWFRDGTA------ITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIPNIPVF 146 (245)
Q Consensus 73 ~~~~~~~~~~w~~~~~~------~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~~~p~~ 146 (245)
+.|.|.|.+.|++++.. +....++.. ....|.|.++..+|.|.|+|.+.|..|.....+.|.+...|...
T Consensus 236 ~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~ 311 (388)
T 2v5m_A 236 AQGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQ----VSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAK 311 (388)
T ss_dssp CEEESCCEEEEEEECTTSSCEEECCCSSSEEE----ETTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEE
T ss_pred CCCCCCCEEEEEecCCCCcccccccccCceec----ccCEEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeCCCccc
Confidence 99999999999996432 222223222 23479999999999999999999999987777776665322211
Q ss_pred c--cCccccCCCeeEEEEEeCCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEE
Q psy12131 147 Q--KSSRRLGPDGYRLVWQVDTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAK 224 (245)
Q Consensus 147 ~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~ 224 (245)
. .......++.+.|.|.+.+.++. .+ .|+++.. .+.... ..+.|.++...+.+.|+|.|.
T Consensus 312 ~~~~~~~v~~g~~~~l~C~~~g~p~p-~i-~W~~~g~--------~i~~~~--------~~L~i~~v~~~d~G~Y~C~a~ 373 (388)
T 2v5m_A 312 IDPPTQTVDFGRPAVFTCQYTGNPIK-TV-SWMKDGK--------AIGHSE--------SVLRIESVKKEDKGMYQCFVR 373 (388)
T ss_dssp EESSEEEECTTSCEEEEEEEEEECCC-EE-EEEETTE--------ECSCCS--------SEEEESSCCGGGCEEEEEEEE
T ss_pred cCCCcEEecCCCCEEEEEEeccccCC-eE-EEEECCE--------ECccCC--------CEEEEecCChhhCEEEEEEEE
Confidence 1 11234678899999999766443 22 3444432 011111 568899999999999999999
Q ss_pred ecCCCCCCCcceE
Q psy12131 225 NRFGWSRPSKAYV 237 (245)
Q Consensus 225 N~~G~~~~s~~~~ 237 (245)
|..|....+..+.
T Consensus 374 N~~G~~~~~~~l~ 386 (388)
T 2v5m_A 374 NDRESAEASAELK 386 (388)
T ss_dssp CSSCEEEEEEEEE
T ss_pred cCCCcEEEEEEEE
Confidence 9999876665554
No 47
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.90 E-value=2.7e-22 Score=151.69 Aligned_cols=215 Identities=13% Similarity=0.141 Sum_probs=127.7
Q ss_pred ecceEEEeccCCCCCEEEEEEEEcCCCCc----eeeEEEEEEecCCeEE-eecceEEecCCCeEEEEEEEeecCCC--eE
Q psy12131 9 NRESLDLDRVTLKLAGLYQCIASNNIGES----TSKNFIVNVIYPPEVS-VEKQWIHTAPDMRAEIICNVYANPPA--KV 81 (245)
Q Consensus 9 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~----~~~~~~l~v~~~p~~~-~~~~~~~~~~g~~~~l~C~~~~~~~~--~~ 81 (245)
+...|.|.+++.+|+|.|+|.+.|..+.. ....+.|.|..+|... .......+..|+.+.|.|.+.+.|++ .+
T Consensus 72 ~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~~~~~~~~g~~~~l~C~~~g~p~~~~~v 151 (327)
T 2wng_A 72 MDFSISISNITPADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITL 151 (327)
T ss_dssp CBCCEEECSCCGGGCEEEEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEECCSSCBCTTCEEEEEEEEEEEBSSCCEE
T ss_pred ceeEEEEccCccccCeEEEEEeecCCCcceeEeecCcEEEEEEecCCCceeeccccccCCCCEEEEEEEEeCccCCCcEE
Confidence 34569999999999999999999976541 1245678887655421 11223456789999999999988776 89
Q ss_pred EEEECCEEeccCCcEEEEe-c-C---ceeEEEEccCCCCCCeEEEEEEEeCCcee---EEEEEEEe-cCCCCccccC-cc
Q psy12131 82 EWFRDGTAITLGGRIDMHV-S-S---EKHSLLVRHIKDTDFGNYMCQASNNLGSS---QQFIQLSG-IPNIPVFQKS-SR 151 (245)
Q Consensus 82 ~w~~~~~~~~~~~~~~~~~-~-~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~---~~~~~~~~-~~~~p~~~~~-~~ 151 (245)
.|++++..+.......... . + ..+.|.|.....++.|.|+|.+.|..+.. .....+.+ ...+|.+... ..
T Consensus 152 ~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~ 231 (327)
T 2wng_A 152 KWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQP 231 (327)
T ss_dssp EEEETTEECCCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBCBCCEEEEEEEC
T ss_pred EEEECCEEccccccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccccCCCCEEEEecCC
Confidence 9999998876432211111 0 0 12357777667667899999999987652 23333322 2334443322 22
Q ss_pred ccCCCeeEEEEEeCCC-CCceEEEEEEEeecCCCCeEE-----EeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEe
Q psy12131 152 RLGPDGYRLVWQVDTY-SGIIQYLLKFREREELTPWRN-----IVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKN 225 (245)
Q Consensus 152 ~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N 225 (245)
...++.+.|.|.+.+. ++...+ .|+++.. .... ....... .-.....+.|..+...+.+.|.|.|.|
T Consensus 232 ~~~G~~v~l~C~~~g~~p~~~~v-~W~k~g~---~l~~~~~~~~~~~~~g---~~~~~~~L~i~~~~~~d~G~Y~C~a~N 304 (327)
T 2wng_A 232 VRAENQVNVTCQVRKFYPQRLQL-TWLENGN---VSRTETASTVTENKDG---TYNWMSWLLVNVSAHRDDVKLTCQVEH 304 (327)
T ss_dssp CSSTTCCEEEEEEEEEBSSCEEE-EEEETTE---EEEEEECCSCEECTTS---CEEEEEEEEC-------CCEEEEEEEE
T ss_pred cCCCCcEEEEEEEccccCCCcEE-EEEECCe---EccCcccCceEECCCC---cEEEEEEEEEccccccCCCEEEEEEEe
Confidence 4678899999999764 332223 3554432 1110 0011110 000113466777766677777777999
Q ss_pred cCCCC
Q psy12131 226 RFGWS 230 (245)
Q Consensus 226 ~~G~~ 230 (245)
..|..
T Consensus 305 ~~~~~ 309 (327)
T 2wng_A 305 DGQPA 309 (327)
T ss_dssp TTCCC
T ss_pred CCCCC
Confidence 98754
No 48
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.89 E-value=4.3e-21 Score=150.64 Aligned_cols=227 Identities=14% Similarity=0.110 Sum_probs=140.6
Q ss_pred cceEEEee--cceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEec---CCeEEeecceEEecCCCeEEEEEEEee-
Q psy12131 2 KEIELLYN--RESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIY---PPEVSVEKQWIHTAPDMRAEIICNVYA- 75 (245)
Q Consensus 2 ~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~- 75 (245)
+|+.+... ..+|.|.+++.+|+|.|+|.|.+..+......+.|.|.. +|.+...+.......|+.+.|.|.+.+
T Consensus 64 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~ 143 (438)
T 1qgc_4 64 DRFSGSGSRTDFTLTIDPVEADDVATYYCQQSNEVPLTFGAGTKLDLKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNF 143 (438)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSTTCCBCCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEE
T ss_pred CcEEEEccCCcEEEEeCCCcCcCCeeEEEEEecCCCccccCceeEEecCCCCCCEEEecCCChhhccCCceEEEEEEccc
Confidence 35555433 346999999999999999999998764334556667753 666655433333345789999999987
Q ss_pred cCCC-eEEEEECCEEeccCCcEEE--Eec--C---ceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEecCCCCccc
Q psy12131 76 NPPA-KVEWFRDGTAITLGGRIDM--HVS--S---EKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIPNIPVFQ 147 (245)
Q Consensus 76 ~~~~-~~~w~~~~~~~~~~~~~~~--~~~--~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~~~p~~~ 147 (245)
.|.+ .+.|++++..+........ ... + ..+.|.|..+..+|.|.|+|.+.|..+.......+.....++...
T Consensus 144 ~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~ 223 (438)
T 1qgc_4 144 YPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNECEVMLV 223 (438)
T ss_dssp BSSCEEEEEEETTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEEEEEETTC-CCEEE
T ss_pred cCCCcEEEEEECCEEcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCceecccccccceeEEe
Confidence 6667 8999999988765411111 101 1 135799999999999999999999887754444444322222111
Q ss_pred --cCccccCCCeeEEEEEeCCCCCceEEEEEEEeec-CCCCeEEEeeC-----------CCCCC---CcceeeeEEEecC
Q psy12131 148 --KSSRRLGPDGYRLVWQVDTYSGIIQYLLKFRERE-ELTPWRNIVIP-----------SDGSL---AGPIYTQSYNITG 210 (245)
Q Consensus 148 --~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----------~~~~~---~~~~~~~~~~i~~ 210 (245)
.......++.+.|.|.+.+.+.......|+++.. ....+...... ..... ........+.|.+
T Consensus 224 ~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 303 (438)
T 1qgc_4 224 ESGGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSS 303 (438)
T ss_dssp EECCEEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECS
T ss_pred cCCceEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECC
Confidence 1233567899999999976541111123555421 00001000000 00000 0001125789999
Q ss_pred CCCCceEEEEEEEEecCC
Q psy12131 211 LQLFTQYEASVLAKNRFG 228 (245)
Q Consensus 211 l~~~~~y~~~v~a~N~~G 228 (245)
+...+.+.|.|.|.|..|
T Consensus 304 v~~~D~G~Y~C~a~n~~~ 321 (438)
T 1qgc_4 304 LRSADTAMYYCVRREDGG 321 (438)
T ss_dssp CCGGGCCEEEEEECCSSS
T ss_pred CChhhCEEEEEEEEccCC
Confidence 999999999999999655
No 49
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.89 E-value=2.8e-21 Score=134.89 Aligned_cols=128 Identities=19% Similarity=0.315 Sum_probs=111.9
Q ss_pred cceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEE--CC
Q psy12131 10 RESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFR--DG 87 (245)
Q Consensus 10 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~--~~ 87 (245)
+..|.|.+++.+|+|.|+|.+.+. +. .+..+.|.|..+|.+...+....+..|+.+.|.|.+.|.|.|.+.|++ ++
T Consensus 55 ~~~L~i~~~~~~d~G~Y~C~~~n~-~~-~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g 132 (190)
T 2wv3_A 55 NMEYRINKPRAEDSGEYHCVYHFV-SA-PKANATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENG 132 (190)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEET-TE-EEEEEEEEEECCCEEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETT
T ss_pred cEEEEEecCCcccCEEEEEEEEeC-Cc-ccccEEEEEecCCcccccCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCC
Confidence 356999999999999999999998 65 788899999999999888877888999999999999999999999999 77
Q ss_pred EEec---cCCcEEEEecCceeEEEEccCC-CCCCeEEEEEEEeCCceeEEEEEEEe
Q psy12131 88 TAIT---LGGRIDMHVSSEKHSLLVRHIK-DTDFGNYMCQASNNLGSSQQFIQLSG 139 (245)
Q Consensus 88 ~~~~---~~~~~~~~~~~~~~~l~i~~~~-~~d~g~y~C~~~n~~g~~~~~~~~~~ 139 (245)
..+. ...++.+...+....|.|.++. .+|.|.|+|.+.|..|.....+.|.+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V 188 (190)
T 2wv3_A 133 VFEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYECNATNSIGSASVSTVLRV 188 (190)
T ss_dssp EEEECCCTTSCEEEEECSSEEEEEECSCCTTTSCEEEEEEEECSSCEEEEEEEEEE
T ss_pred ceeeeecCCCeEEEecCCCeeEEEEEeccccCCCEEEEEEEEecCCcceeEEEEEE
Confidence 7664 4456677666667789999999 79999999999999999888777665
No 50
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.89 E-value=1.3e-22 Score=158.19 Aligned_cols=210 Identities=13% Similarity=0.099 Sum_probs=131.4
Q ss_pred CCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEee-cCCCeEEEEECCEEeccCCcEE
Q psy12131 19 TLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYA-NPPAKVEWFRDGTAITLGGRID 97 (245)
Q Consensus 19 ~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~~~~w~~~~~~~~~~~~~~ 97 (245)
+..|+|.|+|.|.|..|......+.|.|..+|.+ .+....+.+|+.+.|.|.+.| .|.|.+.|++++..+.....+.
T Consensus 199 ~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~--~~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~ 276 (423)
T 3qs7_E 199 HELFGTDIRCCARNELGRECTRLFTIDLNQTPQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFE 276 (423)
T ss_dssp CCCCSSCEEEEEECSSCEEEEECEEEESSSCCCS--STTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEE
T ss_pred ecccCeEEEEEEEcCCCCcceeeEEEEEecCCcc--CCCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccccceee
Confidence 6789999999999998875455577887776664 444667889999999999998 6678999999988765432221
Q ss_pred E--Ee----cCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEecCCCCccc----cCccccCCCeeEEEEEeCCC
Q psy12131 98 M--HV----SSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIPNIPVFQ----KSSRRLGPDGYRLVWQVDTY 167 (245)
Q Consensus 98 ~--~~----~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~~~p~~~----~~~~~~~~~~~~l~~~~~~~ 167 (245)
. .. ......|.|.++..+|.|.|+|.|.|. ....+.|.+...|.... ....+..|+.+.|.|.+.+.
T Consensus 277 ~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~---~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~ 353 (423)
T 3qs7_E 277 MSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAY 353 (423)
T ss_dssp EEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE---EEEEEEEEEESSCEEEEC---CEECCCTTCCCCEEEEEEEE
T ss_pred cccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC---CCceEEEEEEeCCcceEcCCCccEEecCCCeEEEEEEEEEc
Confidence 1 10 112347999999999999999999998 44445555443332211 11234678899999999776
Q ss_pred CCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceEEecCCCCC
Q psy12131 168 SGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYVFATEGAET 245 (245)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~~t~~~~~ 245 (245)
++. .+ .|+++.. .+..... ..... ..+........+.+.|+|.|.|..|....+..+.+...++++
T Consensus 354 P~p-~i-~W~k~g~------~l~~~~~-~~~~~---~~~~~~~~~~~D~G~YtC~A~N~~G~~~~s~~L~v~~~p~~~ 419 (423)
T 3qs7_E 354 PQI-RC-TWTFSRK------SFPCEQK-GLDNG---YSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRSGTKHH 419 (423)
T ss_dssp SCC-EE-EEEETTE------EEECBCC-BCSSS---SEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--------
T ss_pred CCC-eE-EEEECCE------ECCCccc-cccCC---cEEEEEecccccCEEEEEEEEcCCceEEEEEEEEEecCCccc
Confidence 543 22 3444432 1111000 00000 112113344455556666699999998888888888877654
No 51
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.89 E-value=1.1e-21 Score=145.31 Aligned_cols=133 Identities=22% Similarity=0.402 Sum_probs=118.9
Q ss_pred EeecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEEC
Q psy12131 7 LYNRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRD 86 (245)
Q Consensus 7 ~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~ 86 (245)
..+...|.|.+++.+|+|.|+|.+.|..|. ....+.|.|..+|.+...+....+..|+.+.|.|.+.|.|.+.+.|+++
T Consensus 151 ~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~ 229 (284)
T 2rik_A 151 VESVAVLEMYNLSVEDSGDYTCEAHNAAGS-ASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKD 229 (284)
T ss_dssp ETTEEEEEECSCCGGGCEEEEEEEECSSCE-EEEEEEEEEECCCBCCSCCCCEEECTTCCEEEEEECBSSSCCEEEEEET
T ss_pred cCCEEEEEECCCCcccCEEEEEEEEcCCCc-eeEEEEEEEecCCcceeCCCcceecCCCeEEEEEEEEecCCCEEEEEEC
Confidence 344567999999999999999999999887 6788999999999988877777889999999999999999999999999
Q ss_pred CEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEec
Q psy12131 87 GTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGI 140 (245)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~ 140 (245)
+..+....++.+...+....|.|.++..+|.|.|+|.|.|..|.....+.|.+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 283 (284)
T 2rik_A 230 KRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITLK 283 (284)
T ss_dssp TEEECBTTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CEECcCCCCEEEEEcCCEEEEEEcCCCcccCEEEEEEEEeCCCceeEEEEEEEc
Confidence 999988888887777777899999999999999999999999998888877654
No 52
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.89 E-value=7.3e-22 Score=137.95 Aligned_cols=136 Identities=24% Similarity=0.420 Sum_probs=114.6
Q ss_pred cceEEEeecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCCCeE
Q psy12131 2 KEIELLYNRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKV 81 (245)
Q Consensus 2 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~ 81 (245)
.|+.+..++..|.|.+++.+|+|.|+|.+.+..|......+.|.|..+|.+...+....+..|+.+.|.|.+.+.|.+.+
T Consensus 53 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v 132 (192)
T 2iep_A 53 TRYSIRENGQLLTILSVEDSDDGIYCCTANNGVGGAVESCGALQVKMKPKITRPPINVKIIEGLKAVLPCTTMGNPKPSV 132 (192)
T ss_dssp TTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSSCCEEEEEEEEEEEEEEEEECCCCEEEETTSCEEECCEEEEESCCEE
T ss_pred ccEEEcCCccEEEEcCCCcccCeEEEEEEEcCCCceeEeEEEEEEEeCCccccCCcceEEeCCCcEEEEEEEeccCCceE
Confidence 46777777788999999999999999999998877566778889999999888777778889999999999999999999
Q ss_pred EEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeE-EEEEEEec
Q psy12131 82 EWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQ-QFIQLSGI 140 (245)
Q Consensus 82 ~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~-~~~~~~~~ 140 (245)
.|++++..+....++.+... ..|.|.++..+|.|.|+|.+.|..|... ..+.|.+.
T Consensus 133 ~W~~~~~~~~~~~~~~~~~~---~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~ 189 (192)
T 2iep_A 133 SWIKGDSALRENSRIAVLES---GSLRIHNVQKEDAGQYRCVAKNSLGTAYSKLVKLEVE 189 (192)
T ss_dssp EEEETTEECCCCSSEEECTT---SCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred EEEeCCEEccCCCcEEEecC---CcEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEEEE
Confidence 99999998887666554333 3799999999999999999999998763 34555443
No 53
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.89 E-value=2e-22 Score=161.15 Aligned_cols=209 Identities=13% Similarity=0.092 Sum_probs=140.4
Q ss_pred eccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEe-ecCCCeEEEEECCEEeccCC
Q psy12131 16 DRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVY-ANPPAKVEWFRDGTAITLGG 94 (245)
Q Consensus 16 ~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~-~~~~~~~~w~~~~~~~~~~~ 94 (245)
..++..|+|.|+|.|.|..|......+.|.|..+|.+ .+....+.+|+.+.|.|.+. +.|.+.+.|++++..+....
T Consensus 196 ~~~~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~--~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~ 273 (527)
T 3qs9_E 196 KVLHELFGTDIRCCARNELGRECTRLFTIDLNQTPQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGN 273 (527)
T ss_dssp SEECCCCSSCEEEEEECSSCEEEEECEEEESSSCCCC--SCCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGG
T ss_pred eeccccCCEEEEEEEEeCCCcccceEEEEEEeccCcc--CCCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCc
Confidence 3456889999999999998875455588888877775 55567788999999999996 88999999999988765543
Q ss_pred cEEEEe------cCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEecCCCCcccc----CccccCCCeeEEEEEe
Q psy12131 95 RIDMHV------SSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIPNIPVFQK----SSRRLGPDGYRLVWQV 164 (245)
Q Consensus 95 ~~~~~~------~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~~~p~~~~----~~~~~~~~~~~l~~~~ 164 (245)
.+.... ......|.|.++..+|.|.|+|.|.|. ....+.|.+...|..... ......++.+.|.|.+
T Consensus 274 ~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~---~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~ 350 (527)
T 3qs9_E 274 YFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRF 350 (527)
T ss_dssp EEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTE---EEEEEEEEEC--CEEECCCSCCEECCCTTCCCCEEEEE
T ss_pred eeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeC---CCceEEEEEEccCccccccCcccEEEcCCCeEEEEEEE
Confidence 322110 012346999999999999999999998 444555555433321111 1234668899999999
Q ss_pred CCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceEEecC
Q psy12131 165 DTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYVFATE 241 (245)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~~t~ 241 (245)
.+.++.. ..|+++.. .+....... .....+.|.++...+.+.|+|.|.|..|....+..+.+..+
T Consensus 351 ~g~P~p~--i~W~k~g~------~l~~~~~~~----~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~~~ 415 (527)
T 3qs9_E 351 KAYPQIR--CTWTFSRK------SFPCEQKGL----DNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRRK 415 (527)
T ss_dssp EEESCCE--EEEEETTE------EEECBCCBC----SSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--CC
T ss_pred EecCCCE--EEEEECCE------ECcCCcccc----cCCcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEecC
Confidence 7765432 23454432 010000000 01145778888888888888889999997766555555533
No 54
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.89 E-value=1.8e-21 Score=136.53 Aligned_cols=128 Identities=23% Similarity=0.301 Sum_probs=111.0
Q ss_pred eEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeec-----ceEEecCCCeEEEEEEEeecCCCeEEEEEC
Q psy12131 12 SLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEK-----QWIHTAPDMRAEIICNVYANPPAKVEWFRD 86 (245)
Q Consensus 12 ~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~-----~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~ 86 (245)
.|.|.+++.+|+|.|+|.+.|..|. .+..+.|.|..+|.+..++ ....+..|+.+.|.|.+.+.|.|.+.|+++
T Consensus 63 ~L~i~~~~~~d~G~Y~C~~~n~~g~-~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~ 141 (197)
T 2j8h_A 63 QLIIASVTDDDATVYQVRATNQGGS-VSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKG 141 (197)
T ss_dssp EEEECSCCGGGCSEEEEEEEETTEE-EEEEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEES
T ss_pred EEEECcCCHHhCEEEEEEEEECCCc-eeEEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEEC
Confidence 7999999999999999999998776 6888889998877764432 345678899999999999999999999999
Q ss_pred CEEeccCCcEEEEecCceeEEEEcc-CCCCCCeEEEEEEEeCCceeEEEEEEEec
Q psy12131 87 GTAITLGGRIDMHVSSEKHSLLVRH-IKDTDFGNYMCQASNNLGSSQQFIQLSGI 140 (245)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~g~y~C~~~n~~g~~~~~~~~~~~ 140 (245)
+..+....++.+........|.|.+ +...|.|.|+|.+.|..|.....+.|.+.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 142 QDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVA 196 (197)
T ss_dssp SCEECSSSSCEEEECSSEEEEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CEEeecCCCEEEEEcCCceEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEe
Confidence 9988877777777666778999999 99999999999999999998888877653
No 55
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.88 E-value=3.5e-22 Score=153.17 Aligned_cols=195 Identities=10% Similarity=0.015 Sum_probs=136.9
Q ss_pred eecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEee-----cCCCeEE
Q psy12131 8 YNRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYA-----NPPAKVE 82 (245)
Q Consensus 8 ~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-----~~~~~~~ 82 (245)
.....|.|.+++.+|+|.|+|.|.+..+. ....+.|.|..+|... ....+.+|+.+.|.|.+.+ .|.|.+.
T Consensus 139 ~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~-~~~~~~l~v~~~p~~~---~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~ 214 (363)
T 1wio_A 139 QGGKTLSVSQLELQDSGTWTCTVLQNQKK-VEFKIDIVVLAFQKAS---SIVYKKEGEQVEFSFPLAFTVEKLTGSGELW 214 (363)
T ss_dssp EESSEEEECSBCGGGCEECEEEEEETTEE-EEECCEECEECCSCSE---EEEEEETBCCEEEECCCCCCCCSSCEEEEEE
T ss_pred ccceEEEEeeCChhcCCEEEEEEecCCCe-EEEEEEEEEecCCCCC---CceEEecCCEEEEEEEEecccccCCCceeEE
Confidence 35677999999999999999999987544 5666777777666543 4556788999999998877 6788999
Q ss_pred EEECCEEecc--------CCcEEEEe----------cCceeEEEEccCCCCCCeEEEEEEEeC--CceeEEEEEEEecCC
Q psy12131 83 WFRDGTAITL--------GGRIDMHV----------SSEKHSLLVRHIKDTDFGNYMCQASNN--LGSSQQFIQLSGIPN 142 (245)
Q Consensus 83 w~~~~~~~~~--------~~~~~~~~----------~~~~~~l~i~~~~~~d~g~y~C~~~n~--~g~~~~~~~~~~~~~ 142 (245)
|++++..+.. ...+.+.. ......|.|.++...|.|.|+|.|.|. .|.....+.|.+.
T Consensus 215 W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~-- 292 (363)
T 1wio_A 215 WQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVM-- 292 (363)
T ss_dssp EEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEEE--
T ss_pred EecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEEE--
Confidence 9999877655 34444322 222458999999999999999999999 8888777777765
Q ss_pred CCccccCccccCCCeeEEEEEeCCCC-CceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEE
Q psy12131 143 IPVFQKSSRRLGPDGYRLVWQVDTYS-GIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASV 221 (245)
Q Consensus 143 ~p~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v 221 (245)
...+..+.|.|.+.+.+ |...+ .|+++.. ... . . ..+.|..+...+.+.|+|
T Consensus 293 ---------~v~g~~~~l~C~~~g~p~p~~~i-~W~~~~~-~~~-~------~---------~~l~i~~v~~~d~G~Y~C 345 (363)
T 1wio_A 293 ---------RATQLQKNLTCEVWGPTSPKLML-SLKLENK-EAK-V------S---------KREKAVWVLNPEAGMWQC 345 (363)
T ss_dssp ---------EECCCSSSEEEEEESSCCTTCCE-EEECSSS-SCS-E------E---------ESSSEEEESSCCSEEEEE
T ss_pred ---------EecCCCeeEEEEEccccCCCccE-EEEeCCC-cee-e------e---------eeeeeeeeccccceeEEE
Confidence 12277899999996664 33222 3444432 111 0 0 223455666777777788
Q ss_pred EEEecCCCCCCCcce
Q psy12131 222 LAKNRFGWSRPSKAY 236 (245)
Q Consensus 222 ~a~N~~G~~~~s~~~ 236 (245)
.|.|. |....+..+
T Consensus 346 ~a~~~-~~~~~~~~~ 359 (363)
T 1wio_A 346 LLSDS-GQVLLESNI 359 (363)
T ss_dssp EECSS-SSCCEEEEE
T ss_pred EEecC-CeEEEecce
Confidence 89975 443333333
No 56
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.88 E-value=6.8e-21 Score=135.08 Aligned_cols=138 Identities=15% Similarity=0.220 Sum_probs=110.7
Q ss_pred cceEEEeec--ceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEec--------------------CCeEE-eecce
Q psy12131 2 KEIELLYNR--ESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIY--------------------PPEVS-VEKQW 58 (245)
Q Consensus 2 ~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~--------------------~p~~~-~~~~~ 58 (245)
+|+.+...+ ..|.|.+++.+|+|.|+|.+.+..+. ....+.|.|.. .|.+. ..+..
T Consensus 48 ~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~-~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 126 (212)
T 2r15_A 48 DRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTG-HQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDV 126 (212)
T ss_dssp SSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCE-EEEEEEECHHHHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSE
T ss_pred CeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcc-eEEEEEEEEeeccchhhhccccCcccccccCCCcccccCCCc
Confidence 345554444 34999999999999999999997766 45666665542 33333 33556
Q ss_pred EEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEec-CceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEE
Q psy12131 59 IHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVS-SEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 137 (245)
Q Consensus 59 ~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~ 137 (245)
..+..|+.+.|.|.+.|.|.|.+.|++++..+....++.+... +....|.|.++..+|.|.|+|.+.|..|.....+.|
T Consensus 127 ~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l 206 (212)
T 2r15_A 127 VTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTV 206 (212)
T ss_dssp EEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEccCCeEEEEEEEcCCCCceEEEEECCeECccCCCEEEEEcCCCEEEEEEcCcchHHCeEEEEEEEcCCCcEEEEEEE
Confidence 7788999999999999999999999999999988777776554 556799999999999999999999999998888877
Q ss_pred Eec
Q psy12131 138 SGI 140 (245)
Q Consensus 138 ~~~ 140 (245)
.+.
T Consensus 207 ~V~ 209 (212)
T 2r15_A 207 SVF 209 (212)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 57
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.88 E-value=1.8e-21 Score=153.40 Aligned_cols=214 Identities=12% Similarity=0.094 Sum_probs=141.7
Q ss_pred eEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEe-ecceEEecCCCeEEEEEEEeecCCC---eEEEEECC
Q psy12131 12 SLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSV-EKQWIHTAPDMRAEIICNVYANPPA---KVEWFRDG 87 (245)
Q Consensus 12 ~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~-~~~~~~~~~g~~~~l~C~~~~~~~~---~~~w~~~~ 87 (245)
.|.|.+++. |+| |+|.|.+..+. .+..+.|.|..+|.+.. .+....+.+|+.+.|.|.+.+.+++ .+.|++++
T Consensus 51 ~l~i~~v~~-d~g-Y~C~a~~~~~~-~~~~~~l~V~~~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g 127 (450)
T 1z7z_I 51 VYELSNVQE-DSQ-PMCYSNCPDGQ-STAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGE 127 (450)
T ss_dssp EEEEEEECS-CBC-CEEEEEETTEE-EEEECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETT
T ss_pred EEEEEeccc-CCe-eEEEEeCCCCc-ceeEEEEEEEeCCCcceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCC
Confidence 599999987 999 99999765443 67788889988887763 4455678899999999999998888 99999999
Q ss_pred EEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeE--------EEEEEEe--c-CCCCccccCccccCCC
Q psy12131 88 TAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQ--------QFIQLSG--I-PNIPVFQKSSRRLGPD 156 (245)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~--------~~~~~~~--~-~~~p~~~~~~~~~~~~ 156 (245)
..+...... .......|.|..+..+|.|.|+|.+.|..|... ....+.+ . ..+|.+........++
T Consensus 128 ~~l~~~~~~---~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~~~~~~~v~~G~ 204 (450)
T 1z7z_I 128 KELKREPAV---GEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDT 204 (450)
T ss_dssp EEEEEEECC---TTTEEEEEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCCSSCCEEECCSEEETTS
T ss_pred EEeeccccc---ccccceEEEEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeeeccCCCCCEecCceeEEeCC
Confidence 877643211 122345899999999999999999999876422 1222222 2 2344443334567899
Q ss_pred eeEEEEEeCCCCC--ceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCc--eEEEEEEEEecCCCCCC
Q psy12131 157 GYRLVWQVDTYSG--IIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFT--QYEASVLAKNRFGWSRP 232 (245)
Q Consensus 157 ~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~--~y~~~v~a~N~~G~~~~ 232 (245)
.+.|.|.+.+..| ...+. |+++...-.. .+...... ....+.+ .+...+ .|.|+|.|.|..|....
T Consensus 205 ~v~l~C~~~g~~P~~~~~~~-W~~~~~~~~~--~~~~~~~~------~~~~~~~-~v~~~d~G~~~Y~C~a~n~~g~~~~ 274 (450)
T 1z7z_I 205 QGTVVCSLDGLFPVSEAQVH-LALGDQRLNP--TVTYGNDS------FSAKASV-SVTAEDEGTQRLTCAVILGNQSQET 274 (450)
T ss_dssp EEEEEEEEESCTTGGGCEEE-EEETTEECCC--EEEEETTE------EEEEEEE-ECCGGGCEEEEEEEEEEETTEEEEE
T ss_pred cEEEEEEeeCCCCCCceEEE-EeCCCEeCCc--eEEecCCc------eeEEEEE-EeEhhhCCcEEEEEEEccCCccEEE
Confidence 9999999977644 33333 4443321111 11111110 1111122 444555 55999999999988766
Q ss_pred CcceEEecC
Q psy12131 233 SKAYVFATE 241 (245)
Q Consensus 233 s~~~~~~t~ 241 (245)
+..+.+...
T Consensus 275 ~~~l~V~~~ 283 (450)
T 1z7z_I 275 LQTVTIYSF 283 (450)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEecC
Confidence 666666653
No 58
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.88 E-value=8.1e-22 Score=153.11 Aligned_cols=222 Identities=18% Similarity=0.189 Sum_probs=149.6
Q ss_pred eEEEeecceEEEe----ccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEee-cceEEecCCCeEEEEEEE-eecC
Q psy12131 4 IELLYNRESLDLD----RVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVE-KQWIHTAPDMRAEIICNV-YANP 77 (245)
Q Consensus 4 ~~~~~~~~~L~i~----~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~-~~~~~~~~g~~~~l~C~~-~~~~ 77 (245)
+.+...+..|.|. +++.+|+|.|+|.+.|..|...+..+.|.|..+|.+... .....+.+|+.+.|.|.+ .+.|
T Consensus 66 ~~~~~~~~~l~i~~~~~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p 145 (404)
T 3p3y_A 66 VSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLP 145 (404)
T ss_dssp CBCCSSSCCCBCCCTTTCCTTSSCEEEEEEEECSSCEEEEEEEEEEECCCCCCCCCCCCCEEEETTSCEEECCCCCCCSS
T ss_pred ceEecCCceEEEEeccCCCCccCCEEEEEEEEcCCCeEeeeeEEEEEeccCccccCCCCCeEEccCCcEEEEeCCCCCCC
Confidence 3334445557665 889999999999999998875567888999887765433 344678899999999999 7888
Q ss_pred CCeEEEEECCE-EeccCCcEEEEecCceeEEEEccCCCCC-CeEEEEEEEeCCceeEE---EEEEEec------CCCCcc
Q psy12131 78 PAKVEWFRDGT-AITLGGRIDMHVSSEKHSLLVRHIKDTD-FGNYMCQASNNLGSSQQ---FIQLSGI------PNIPVF 146 (245)
Q Consensus 78 ~~~~~w~~~~~-~~~~~~~~~~~~~~~~~~l~i~~~~~~d-~g~y~C~~~n~~g~~~~---~~~~~~~------~~~p~~ 146 (245)
.+.+.|++++. .+....+.... ....|.|.++...| .|.|+|.+.|..|.... .+.+.+. ..+|.+
T Consensus 146 ~~~v~W~~~~~~~~~~~~~~~~~---~~~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~ 222 (404)
T 3p3y_A 146 SPVIFWMSSSMEPITQDKRVSQG---HNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSF 222 (404)
T ss_dssp CCEEEEECTTSCBCCCCSSEEEC---TTSCEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCB
T ss_pred CCeEEEeCCCccccCCCCcEEEc---CCCcEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCcc
Confidence 89999999874 33334444332 23479999999999 59999999998775322 2223322 122322
Q ss_pred ccC------ccccCCCeeEEEEEeCCCCCceEEEEEEEeec-CCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEE
Q psy12131 147 QKS------SRRLGPDGYRLVWQVDTYSGIIQYLLKFRERE-ELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEA 219 (245)
Q Consensus 147 ~~~------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~ 219 (245)
... .....++.+.|.|.+.+.++. . ..|+++.. ....-..... . ...+.|.++...+.+.|
T Consensus 223 ~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~-~-v~W~~~~~~~~~~~~~~~~-~---------~~~L~i~~~~~~d~G~Y 290 (404)
T 3p3y_A 223 MYPQGTASSQMVLRGMDLLLECIASGVPTP-D-IAWYKKGGDLPSDKAKFEN-F---------NKALRITNVSEEDSGEY 290 (404)
T ss_dssp SSSCSSEEEEEEETTSCEEEECCBCCSSCC-E-EEEEETTBCCCTTTEEEEG-G---------GTEEEESSCCGGGCEEE
T ss_pred ccccCCCCCceEecCCCEEEEEEECCCCCC-c-EEEEECCEECCCCcccccc-c---------CceEEEccCCHhHCEEE
Confidence 221 235678899999999776443 2 33555543 1111111111 1 14688999999999999
Q ss_pred EEEEEecCCCCCCCcceEEec
Q psy12131 220 SVLAKNRFGWSRPSKAYVFAT 240 (245)
Q Consensus 220 ~v~a~N~~G~~~~s~~~~~~t 240 (245)
+|.|.|..|....+..+.+..
T Consensus 291 ~C~a~n~~g~~~~~~~l~V~~ 311 (404)
T 3p3y_A 291 FCLASNKMGSIRHTISVRVKA 311 (404)
T ss_dssp EEEEECSSCEEEEEEEEEEEE
T ss_pred EEEEEeCCCcEEEEEEEEEeC
Confidence 999999999765555555543
No 59
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.88 E-value=4.3e-22 Score=153.93 Aligned_cols=223 Identities=16% Similarity=0.199 Sum_probs=149.3
Q ss_pred ecceEEEeccCCCC------CEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCC---C
Q psy12131 9 NRESLDLDRVTLKL------AGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPP---A 79 (245)
Q Consensus 9 ~~~~L~i~~~~~~d------~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~---~ 79 (245)
.+.+|.|.+++.+| +|.|+|.|.|..|...+..+.|.+..+|.+...+....+.+|+.+.|.|.+.+.+. +
T Consensus 57 ~~~~L~i~~~~~~d~~~~~d~G~Y~C~a~n~~g~~~s~~~~v~v~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~~ 136 (388)
T 2v5m_A 57 SDGKLVFPPFRAEDYRQEVHAQVYACLARNQFGSIISRDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVE 136 (388)
T ss_dssp STTEEEECCCCGGGCCHHHHEEEEEEEEEETTEEEECCCEEEEEECCCCCCCBCCCEEEETTSCEEECCBCCTTTTTTEE
T ss_pred CCceEEecccChhhccccccCceEEEEEEccCCeEEecceEEEEccccccccCccceeeecCCcEEEEEECcCCCCCCcc
Confidence 45679999999997 99999999998876456778888888888777776778889999999999987654 6
Q ss_pred eEEEEECCEEecc-----CCcEEEEecCceeEEEEccCCCCCC-eEEEEEEEeCCceeEE------EEEEEec-----CC
Q psy12131 80 KVEWFRDGTAITL-----GGRIDMHVSSEKHSLLVRHIKDTDF-GNYMCQASNNLGSSQQ------FIQLSGI-----PN 142 (245)
Q Consensus 80 ~~~w~~~~~~~~~-----~~~~~~~~~~~~~~l~i~~~~~~d~-g~y~C~~~n~~g~~~~------~~~~~~~-----~~ 142 (245)
.+.|++++..+.. ..++.+. ....|.|.++..+|. |.|+|.+.|..+.... .+.+... |.
T Consensus 137 ~v~W~~~~~~~~~~~~~~~~~~~~~---~~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~ 213 (388)
T 2v5m_A 137 VVSWHTDEEENYFPGAEYDGKYLVL---PSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPR 213 (388)
T ss_dssp EEEEEETTCCEECSSSCBTTTEEEC---TTSCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEE
T ss_pred eEEEEeCCCcccccccCCCCcEEEc---cCCcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCc
Confidence 8999998865532 2333332 234799999999999 9999999997643221 2333321 11
Q ss_pred CCcc-ccCccccCCCeeEEEEEeCCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEE
Q psy12131 143 IPVF-QKSSRRLGPDGYRLVWQVDTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASV 221 (245)
Q Consensus 143 ~p~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v 221 (245)
.+.+ ........++.+.|.|.+.+.++. . ..|+++.. ............. .......+.|.++...+.+.|+|
T Consensus 214 ~~~~~~~~~~v~~G~~v~l~C~~~g~p~p-~-v~W~~~~~-~~~~~~~~~~~~~---~~~~~~~L~i~~v~~~d~G~Y~C 287 (388)
T 2v5m_A 214 TPALVQKPLELMVAHTISLLCPAQGFPAP-S-FRWYKFIE-GTTRKQAVVLNDR---VKQVSGTLIIKDAVVEDSGKYLC 287 (388)
T ss_dssp CCSSCCCCEEEETTSCEEECCCCEEESCC-E-EEEEEECT-TSSCEEECCCSSS---EEEETTEEEESSCCGGGCEEEEE
T ss_pred CccccCCceEEeeCCcEEEEEECCCCCCC-E-EEEEecCC-CCcccccccccCc---eecccCEEEECcCCHHHCeEEEE
Confidence 1111 112234668899999998665433 2 33555532 1111110000000 00112468899999999999999
Q ss_pred EEEecCCCCCCCcceEEec
Q psy12131 222 LAKNRFGWSRPSKAYVFAT 240 (245)
Q Consensus 222 ~a~N~~G~~~~s~~~~~~t 240 (245)
.|.|..|....+..+.+..
T Consensus 288 ~a~n~~g~~~~~~~l~V~~ 306 (388)
T 2v5m_A 288 VVNNSVGGESVETVLTVTA 306 (388)
T ss_dssp EEECSSCEEEEEEEEEEEE
T ss_pred EEecCCCceeEEEEEEEeC
Confidence 9999999765555555543
No 60
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.88 E-value=5e-22 Score=153.89 Aligned_cols=223 Identities=15% Similarity=0.127 Sum_probs=142.5
Q ss_pred EEeecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEE-eecCCCeEEEE
Q psy12131 6 LLYNRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNV-YANPPAKVEWF 84 (245)
Q Consensus 6 ~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~~~w~ 84 (245)
...+..+|.|.+++.+|+|.|+|.+.|..|...+..+.|.|...+.+...+....+.+|+.+.|.|.+ .+.|.+.+.|+
T Consensus 57 ~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~p~~~~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~ 136 (395)
T 1bih_A 57 LRKDEGSLVFLRPQASDEGHYQCFAETPAGVASSRVISFRKTYLIASPAKTHEKTPIEGRPFQLDCVLPNAYPKPLITWK 136 (395)
T ss_dssp ECTTSCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEEEECCCCEEEEECCBTTEEEEECCCCCEEESCCEEEEE
T ss_pred EecCCceEEEecCCCCCCcEEEEEEEeCCCeEEeEEEEEEEEEeecCCcCCcceeeeeCCcEEEEecCCCCCCCCeEEEE
Confidence 33445679999999999999999999987764444455555432222223445667799999999996 88899999999
Q ss_pred ECC---EEecc----CCcEEEEecCceeEEEEccCCCCCCe---EEEEEEEeCCceeEEEEEEE---ec--C-------C
Q psy12131 85 RDG---TAITL----GGRIDMHVSSEKHSLLVRHIKDTDFG---NYMCQASNNLGSSQQFIQLS---GI--P-------N 142 (245)
Q Consensus 85 ~~~---~~~~~----~~~~~~~~~~~~~~l~i~~~~~~d~g---~y~C~~~n~~g~~~~~~~~~---~~--~-------~ 142 (245)
+++ ..... ..++.... ...|.|.++...|.| .|+|.+.|..|.....+... .. + .
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~---~~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (395)
T 1bih_A 137 KRLSGADPNADVTDFDRRITAGP---DGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEP 213 (395)
T ss_dssp EEETTSCGGGCCCCCCTTEEECT---TSCEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCC
T ss_pred ecCCCcCcccccccccccEEEcC---CCcEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEecccccccccccCCc
Confidence 975 21111 23333322 237999999999999 99999999987754433221 11 0 1
Q ss_pred CCccc-cCccccCCCeeEEEEEeCCCCCceEEEEEEEeec--CCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEE
Q psy12131 143 IPVFQ-KSSRRLGPDGYRLVWQVDTYSGIIQYLLKFRERE--ELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEA 219 (245)
Q Consensus 143 ~p~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~ 219 (245)
+|.+. .......++.+.|.|.+.+.++.. ..|+++.. .......+..... .....+.|.++...+.+.|
T Consensus 214 ~p~~~~~~~~~~~G~~v~l~C~~~g~p~~~--i~W~~~g~~~~~~~~~~~~~~~~------~~~~~L~i~~~~~~d~G~Y 285 (395)
T 1bih_A 214 VPQYVSKDMMAKAGDVTMIYCMYGSNPMGY--PNYFKNGKDVNGNPEDRITRHNR------TSGKRLLFKTTLPEDEGVY 285 (395)
T ss_dssp EEEEECCSEEEETTSCEEEEEEEECSSCCC--CEEEETTEECCCCTTSSEESCSS------STTSEEEESSCCGGGCEEE
T ss_pred CceecCCceEEECCCcEEEEEEeccCCCCe--EEEEECCEEcCCCCceeEEEEec------CCCceEEEccCChhhCEEE
Confidence 22221 123456789999999996654332 23444432 0100000111000 0113789999999999999
Q ss_pred EEEEEecCCCCCC-CcceEEe
Q psy12131 220 SVLAKNRFGWSRP-SKAYVFA 239 (245)
Q Consensus 220 ~v~a~N~~G~~~~-s~~~~~~ 239 (245)
+|.|.|..|.... +..+.+.
T Consensus 286 ~C~a~n~~g~~~~~~~~l~V~ 306 (395)
T 1bih_A 286 TCEVDNGVGKPQKHSLKLTVV 306 (395)
T ss_dssp EEEECCSSSSCEEEEEEEEEE
T ss_pred EEEEEeCCCCceEEEEEEEEE
Confidence 9999999988654 4445444
No 61
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.88 E-value=5.8e-21 Score=153.20 Aligned_cols=216 Identities=12% Similarity=0.026 Sum_probs=134.1
Q ss_pred eEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEE----ecCCeEEeecceEEecCCCeEEEEEEEeec-CCC-eEEEEE
Q psy12131 12 SLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNV----IYPPEVSVEKQWIHTAPDMRAEIICNVYAN-PPA-KVEWFR 85 (245)
Q Consensus 12 ~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v----~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~~~w~~ 85 (245)
.|.|.+++.+|+|.|+|.|.|..+. ....+.+.+ ..+|.+........+.+|+.+.|.|.+.|. |.| .+.|++
T Consensus 179 ~L~i~~~~~~d~G~Y~C~a~n~~~~-~~~~~~~~~~~~~~~~P~v~~~~~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k 257 (523)
T 2rcj_C 179 YLSLTPEQWKSHRSYSCQVTHEGST-VEKTVAPTECSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPQPVTVSWNS 257 (523)
T ss_pred EEEEechhcCCCceEEEEEEecCcc-cccceeeeecCCCCcCCEEEecCCCcccccCCceEEEEEEeceeCCCeEEEEec
Confidence 5999999999999999999998776 344444322 245666543333456789999999999886 777 899999
Q ss_pred CCEEeccCCcEEEEecC----ceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEecCCCCccccC---c-cccCCCe
Q psy12131 86 DGTAITLGGRIDMHVSS----EKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIPNIPVFQKS---S-RRLGPDG 157 (245)
Q Consensus 86 ~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~~~p~~~~~---~-~~~~~~~ 157 (245)
++..+.......+...+ ..+.|.|..+...| |.|+|.|.|..|.......+.+...|+.+... . ....++.
T Consensus 258 ~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~~~~~l~v~~~P~~~~~~p~~~~~v~~g~~ 336 (523)
T 2rcj_C 258 GALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPLSLPSVFLFPPKPKDTLMISRT 336 (523)
T ss_pred CCcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCcceEEecCCCcCceEEecCCCchhhcccCCc
Confidence 98764321111111111 13579999999999 99999999999887666665543333322211 1 1466889
Q ss_pred eEEEEEeCCCCCc---eEEEEEEEeec--CCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCC
Q psy12131 158 YRLVWQVDTYSGI---IQYLLKFRERE--ELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRP 232 (245)
Q Consensus 158 ~~l~~~~~~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~ 232 (245)
+.|.|.+.+.+|. .. ..|+++.. ....-........+ .-.....+.|..+...+.+.|.|.|.|..|....
T Consensus 337 ~~l~C~~~g~~p~~~~~~-v~W~k~g~~l~~~~~~~~~~~~~g---~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 412 (523)
T 2rcj_C 337 PEVTCVVVDVSHEDPQVK-FNWYVDGVQVHNAKTKPREQQYNS---TYRVVSVLTVLHQNWLDGKEYKCKVSNKALPAPI 412 (523)
T ss_pred eEEEEEEecccCCCCceE-EEEEECCeEccCCccCCceecCCC---cEEEEEEEEECHHHhcCCCeEEEEEeCCCCCCce
Confidence 9999999764332 22 23555433 01100000000110 0011234667666656666666779999876654
Q ss_pred C
Q psy12131 233 S 233 (245)
Q Consensus 233 s 233 (245)
+
T Consensus 413 ~ 413 (523)
T 2rcj_C 413 E 413 (523)
T ss_pred e
Confidence 4
No 62
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.87 E-value=2.2e-21 Score=148.81 Aligned_cols=208 Identities=10% Similarity=0.068 Sum_probs=135.9
Q ss_pred cceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEE
Q psy12131 10 RESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTA 89 (245)
Q Consensus 10 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~ 89 (245)
...|.|.+++.+|+|.|+|.+.+.. ..+.|.|.. +...+. ..+.+|+.+.|.|.+.+.|.|.+.|++++..
T Consensus 66 ~~~L~I~~v~~~D~G~Y~C~~~n~~-----~~~~l~V~~---~~~~~~-~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~ 136 (363)
T 1wio_A 66 NFPLIIKNLKIEDSDTYICEVEDQK-----EEVQLLVFG---LTANSD-THLLQGQSLTLTLESPPGSSPSVQCRSPRGK 136 (363)
T ss_dssp CCCEEECSCCGGGCEEEEEEETTEE-----EEEEEEEEE---EEESSC-SSEESBSCEEEEEECCTTCCCCEEEECSSSC
T ss_pred eEEEEECCCCHHHCEEEEEEEEECC-----CcEEEEEEe---CCCCCc-eEEecCCCEEEEEEcCCCCCCeEEEEcCCCc
Confidence 5569999999999999999999863 356666664 222332 3467999999999999899999999998754
Q ss_pred eccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEecCCCCccccCccccCCCeeEEEEEeCCC--
Q psy12131 90 ITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIPNIPVFQKSSRRLGPDGYRLVWQVDTY-- 167 (245)
Q Consensus 90 ~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~-- 167 (245)
+.. ....|.|.++..+|.|.|+|.+.|..+.....+.+.+...|+. ........++.+.|.|...+.
T Consensus 137 ~~~----------~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~~p~~-~~~~~~~~G~~v~l~C~~~~~~~ 205 (363)
T 1wio_A 137 NIQ----------GGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKA-SSIVYKKEGEQVEFSFPLAFTVE 205 (363)
T ss_dssp EEE----------ESSEEEECSBCGGGCEECEEEEEETTEEEEECCEECEECCSCS-EEEEEEETBCCEEEECCCCCCCC
T ss_pred ccc----------cceEEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEEecCCCC-CCceEEecCCEEEEEEEEecccc
Confidence 311 2347999999999999999999998777666556555422222 123335678999999987552
Q ss_pred --CCceEEEEEEEeec-CCCCeEEEeeCCCCCCC-----------cceeeeEEEecCCCCCceEEEEEEEEec--CCCCC
Q psy12131 168 --SGIIQYLLKFRERE-ELTPWRNIVIPSDGSLA-----------GPIYTQSYNITGLQLFTQYEASVLAKNR--FGWSR 231 (245)
Q Consensus 168 --~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----------~~~~~~~~~i~~l~~~~~y~~~v~a~N~--~G~~~ 231 (245)
.|...+ .|+++.. ....+............ .......+.|.++...+.+.|+|.|.|. .|...
T Consensus 206 ~~~P~p~i-~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~ 284 (363)
T 1wio_A 206 KLTGSGEL-WWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLH 284 (363)
T ss_dssp SSCEEEEE-EEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEE
T ss_pred cCCCceeE-EEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEE
Confidence 122222 3444433 11111111110000000 0001247899999889999999999999 88544
Q ss_pred CCcceEE
Q psy12131 232 PSKAYVF 238 (245)
Q Consensus 232 ~s~~~~~ 238 (245)
.+..+.+
T Consensus 285 ~~~~l~V 291 (363)
T 1wio_A 285 QEVNLVV 291 (363)
T ss_dssp EEEEEEE
T ss_pred EEEeEEE
Confidence 4433333
No 63
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.87 E-value=2.4e-20 Score=130.22 Aligned_cols=136 Identities=25% Similarity=0.429 Sum_probs=111.7
Q ss_pred cceEEEeecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCCCeE
Q psy12131 2 KEIELLYNRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKV 81 (245)
Q Consensus 2 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~ 81 (245)
.++.+..++..|.|.+++.+|+|.|+|.+.+..+. ....+.|.|..+|.+...+. ..+..|+.+.|.|.+.+.|.+.+
T Consensus 49 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~V~~~p~~~~~~~-~~~~~g~~v~l~C~~~~~p~~~v 126 (192)
T 2va4_A 49 EKYILKGSNTELTVRNIINSDGGPYVCRATNKAGE-DEKQAFLQVFVQPHIIQLKN-ETTYENGQVTLVCDAEGEPIPEI 126 (192)
T ss_dssp SSEEEETTTTEEEECSCCGGGCEEEEEEEEETTEE-EEEEEEEEEEEEEEEEEECC-EEECTTSEEEEEEEEEEESCCEE
T ss_pred ccEEEeCCeeEEEEecCChhcCcEEEEEEEccccc-cceEEEEEEEccCcccccCc-ceEEeCCeEEEEEEecCCCCCcE
Confidence 35566666778999999999999999999998776 56788899988888766554 45667999999999999999999
Q ss_pred EEEEC--CEEecc-----CCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEe
Q psy12131 82 EWFRD--GTAITL-----GGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSG 139 (245)
Q Consensus 82 ~w~~~--~~~~~~-----~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~ 139 (245)
.|+++ +..+.. ..++.+........|.|.++..+|.|.|+|.|.|..|.....+.|.+
T Consensus 127 ~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 191 (192)
T 2va4_A 127 TWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDI 191 (192)
T ss_dssp EEEETTTTEEECTTCBCTTSCEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EEEeCCCCceeeccccccCCcEEEeeccCceEEEEecCCcccCEEEEEEEEecCCceEEEEEEEe
Confidence 99998 555543 23455555556678999999999999999999999999888887765
No 64
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.87 E-value=8.6e-21 Score=132.22 Aligned_cols=129 Identities=18% Similarity=0.359 Sum_probs=104.5
Q ss_pred cceEEEeec--ceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCCC
Q psy12131 2 KEIELLYNR--ESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPPA 79 (245)
Q Consensus 2 ~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~ 79 (245)
+|+.+..++ ..|.|.+++.+|+|.|+|.+.+..|...+..+.|.|..+|.+...+....+..|+.+.|.|.+.+.|.|
T Consensus 47 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p 126 (189)
T 2v44_A 47 QRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAP 126 (189)
T ss_dssp SSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEEEEEEEECCCEEESCCCSEEEETTSCEEECCEEECSSCC
T ss_pred ceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCCCcEEEEEEEEEecCCceeecCCcEEEeCCCCEEEEEEECcCCCC
Confidence 355555544 579999999999999999999988875578899999999988776666778899999999999999999
Q ss_pred eEEEEECCEEecc--CCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEE
Q psy12131 80 KVEWFRDGTAITL--GGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQ 133 (245)
Q Consensus 80 ~~~w~~~~~~~~~--~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~ 133 (245)
.+.|++++..+.. ..++.... ...|.|.++..+|.|.|+|.|.|..|....
T Consensus 127 ~v~W~~~~~~~~~~~~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~ 179 (189)
T 2v44_A 127 AVSWLYHNEEVTTISDNRFAMLA---NNNLQILNINKSDEGIYRCEGRVEARGEID 179 (189)
T ss_dssp EEEEEEEC--CEECCCTTEEECT---TSCEEETTCCGGGCEEEEEEEEETTTTEEE
T ss_pred cEEEEECCcEEeccCCCCEEEec---CCcEEEEEcCcccCeEEEEEEEccccCcee
Confidence 9999998887653 34444432 237999999999999999999999865443
No 65
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.87 E-value=2.5e-20 Score=130.61 Aligned_cols=137 Identities=18% Similarity=0.299 Sum_probs=114.0
Q ss_pred ceEEEeecc--eEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEee---cceEEecCCCeEEEEEEEeecC
Q psy12131 3 EIELLYNRE--SLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVE---KQWIHTAPDMRAEIICNVYANP 77 (245)
Q Consensus 3 ~~~~~~~~~--~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~---~~~~~~~~g~~~~l~C~~~~~~ 77 (245)
++.+..++. +|.|.+++.+|+|.|+|.+.+..+. ....+.|.|..+|.+... +....+..|+.+.|.|.+.+.|
T Consensus 53 ~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~-~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p 131 (197)
T 3lcy_A 53 KYKMSSDGRTHTLTVMTEEQEDEGVYTCIATNEVGE-VETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRP 131 (197)
T ss_dssp SEEEEESSSEEEEEEECCSGGGCEEEEEEEECSSCE-EEEEEEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEEES
T ss_pred cEEEEeCCCEEEEEEecCCccCCEEEEEEEECCCCc-eeEEEEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEEeeee
Confidence 344444332 6999999999999999999988776 677788888877766532 2445677899999999999999
Q ss_pred CCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCC-CCCeEEEEEEEeCCceeEEEEEEEec
Q psy12131 78 PAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKD-TDFGNYMCQASNNLGSSQQFIQLSGI 140 (245)
Q Consensus 78 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~-~d~g~y~C~~~n~~g~~~~~~~~~~~ 140 (245)
.|.+.|++++..+....++.+........|.|.++.. +|.|.|+|.+.|..|.....+.|.+.
T Consensus 132 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 195 (197)
T 3lcy_A 132 VPAMTWFHGQKLLQNSENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQ 195 (197)
T ss_dssp CCEEEEEETTEECCCCSSEEEEECSSEEEEEESSCCHHHHCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred CCeeEEeECCEECCCCCceEEEEcCCEEEEEEccccchhhCceEEEEEEcCcCceEEEEEEEEe
Confidence 9999999999999888888877776678999999985 89999999999999998888877764
No 66
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.87 E-value=3.7e-21 Score=148.60 Aligned_cols=127 Identities=23% Similarity=0.353 Sum_probs=112.3
Q ss_pred ecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCE
Q psy12131 9 NRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGT 88 (245)
Q Consensus 9 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~ 88 (245)
.+..|.|.+++.+|+|.|+|.|.|..|. ......|.|..+|.+...+....+..|+.+.|.|.+.|.|.|.+.|++++.
T Consensus 256 ~~~~L~I~~v~~~D~G~Y~C~a~N~~G~-~~~~~~l~v~~~P~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~i~W~k~g~ 334 (384)
T 3kld_A 256 SNGILEIPNFQQEDAGSYECVAENSRGK-NVAKGQLTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGD 334 (384)
T ss_dssp TSCEEEECSCCGGGCEEEEEEEEETTEE-EEEEEEEEEEEEEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTE
T ss_pred CCcEEEECCCChhhCEEEEEEEEcCCCe-EEEEEEEEEecCCccccCCCceEecCCCCEEEEeECCccCCCeEEEEECCE
Confidence 3457999999999999999999999887 677888999999998887777888999999999999999999999999999
Q ss_pred EeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEec
Q psy12131 89 AITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGI 140 (245)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~ 140 (245)
.+....++.+. ...|.|..+..+|.|.|+|.|.|..|.......|.+.
T Consensus 335 ~l~~~~~~~~~----~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~a~L~V~ 382 (384)
T 3kld_A 335 PLLTRDRIQIE----QGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVI 382 (384)
T ss_dssp ECCCBTTEEEE----TTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred ECCCCccEEEe----CCEEEEeecChhhCEEEEEEEEeCCceEEeceEEEEe
Confidence 98776666553 2379999999999999999999999998888887764
No 67
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.86 E-value=9.6e-21 Score=132.65 Aligned_cols=123 Identities=18% Similarity=0.274 Sum_probs=104.6
Q ss_pred ceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCCC-eEEEEECCEE
Q psy12131 11 ESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPPA-KVEWFRDGTA 89 (245)
Q Consensus 11 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~-~~~w~~~~~~ 89 (245)
+.|.|.+++.+|+|.|+|.+.+..+...+..+.|.|..+|.+...+....+.+|+.+.|.|.+.+.|.| .+.|++++..
T Consensus 68 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~ 147 (195)
T 2c5d_C 68 SQLRITSLQLSDTGQYQCLVFLGHQTFVSQPGYVGLEGLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVP 147 (195)
T ss_dssp EEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEECCSCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCB
T ss_pred cEEEEEeccccCCcEEEEEEEeCCCceecccEEEEEecCCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEe
Confidence 579999999999999999999987664556689999999999888777888999999999999999999 9999999988
Q ss_pred eccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeE-EEEEEEec
Q psy12131 90 ITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQ-QFIQLSGI 140 (245)
Q Consensus 90 ~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~-~~~~~~~~ 140 (245)
+...... .....|.|.++. |.|.|+|.|.|..|... ..+.|.+.
T Consensus 148 ~~~~~~~-----~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V~ 192 (195)
T 2c5d_C 148 LATAPGH-----GPQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITVL 192 (195)
T ss_dssp SSSSTTS-----SCCEEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred ccCCCCc-----CCCCeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEEe
Confidence 7654432 245678999887 78999999999999875 67777763
No 68
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.86 E-value=5.2e-20 Score=129.96 Aligned_cols=122 Identities=14% Similarity=0.274 Sum_probs=97.5
Q ss_pred eEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEe---------------------cCCeEEeecceEEecCCCeEEEE
Q psy12131 12 SLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVI---------------------YPPEVSVEKQWIHTAPDMRAEII 70 (245)
Q Consensus 12 ~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~---------------------~~p~~~~~~~~~~~~~g~~~~l~ 70 (245)
+|.|.+++.+|+|.|+|.|.| |. ......+.+. .+|.+.... ...+.+|..+.|.
T Consensus 62 ~L~I~~v~~~D~G~Y~C~a~N--g~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~-~~~v~~g~~v~l~ 137 (207)
T 3rbs_A 62 EMFMEKLQDEDEGTYTFQLQD--GK-ATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL-SWEVTGECNVLLK 137 (207)
T ss_dssp EEEESCCCGGGCEEEEEEEEE--TT-EEEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE-EEEEETTTEEEEE
T ss_pred EEEECCCChhhCEEEEEEEEC--CC-eEEEEEEEEEccchhhhcccccccccccccCCCCceEecC-CcEEcCCCcEEEE
Confidence 599999999999999999999 44 3444443321 267766555 4677899999999
Q ss_pred EEEeec-CCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEe
Q psy12131 71 CNVYAN-PPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSG 139 (245)
Q Consensus 71 C~~~~~-~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~ 139 (245)
|.+.|. |.|.+.|++++..+....++ ........|.|.++..+|.|.|+|.|.|..|.....+.|..
T Consensus 138 C~v~g~~P~p~i~W~k~g~~l~~~~~~--~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~ 205 (207)
T 3rbs_A 138 CKVANIKKETHIVWYKDEREISVDEKH--DFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVD 205 (207)
T ss_dssp EEEESCCTTCEEEEEETTEEECCCCCC--CCSSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEECC
T ss_pred EEEeCCCCCCEEEEEECCEECCCCCce--EcCCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEec
Confidence 999998 89999999999988765443 22233457999999999999999999999999988887764
No 69
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.86 E-value=3.8e-20 Score=129.65 Aligned_cols=183 Identities=16% Similarity=0.151 Sum_probs=131.6
Q ss_pred ecCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEe
Q psy12131 47 IYPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASN 126 (245)
Q Consensus 47 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 126 (245)
..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+....++.+...+....|.|.++..+|.|.|+|.+.|
T Consensus 5 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n 84 (197)
T 3lcy_A 5 GEAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATN 84 (197)
T ss_dssp CEEEEEEECCCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEEC
T ss_pred CCCCcccccCCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEEC
Confidence 35677777777888999999999999999999999999999998888888887777778999999999999999999999
Q ss_pred CCceeEEEEEEEecCCCCccc-----cCccccCCCeeEEEEEeCCCCCceEEEEEEEeec--CCCCeEEEeeCCCCCCCc
Q psy12131 127 NLGSSQQFIQLSGIPNIPVFQ-----KSSRRLGPDGYRLVWQVDTYSGIIQYLLKFRERE--ELTPWRNIVIPSDGSLAG 199 (245)
Q Consensus 127 ~~g~~~~~~~~~~~~~~p~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 199 (245)
..|.....+.+.+...|.... .......+..+.|.|.+.+.++. . ..|+++.. .......+....
T Consensus 85 ~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p-~-v~W~~~~~~~~~~~~~~~~~~~------ 156 (197)
T 3lcy_A 85 EVGEVETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVP-A-MTWFHGQKLLQNSENITIENTE------ 156 (197)
T ss_dssp SSCEEEEEEEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCC-E-EEEEETTEECCCCSSEEEEECS------
T ss_pred CCCceeEEEEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCC-e-eEEeECCEECCCCCceEEEEcC------
Confidence 988877666665542222111 11234568899999999665443 2 23454433 111111121111
Q ss_pred ceeeeEEEecCCCC-CceEEEEEEEEecCCCCCCCcceEEe
Q psy12131 200 PIYTQSYNITGLQL-FTQYEASVLAKNRFGWSRPSKAYVFA 239 (245)
Q Consensus 200 ~~~~~~~~i~~l~~-~~~y~~~v~a~N~~G~~~~s~~~~~~ 239 (245)
....+.|.++.. .+.+.|+|.|.|..|....+..+.+.
T Consensus 157 --~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 195 (197)
T 3lcy_A 157 --HYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQ 195 (197)
T ss_dssp --SEEEEEESSCCHHHHCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred --CEEEEEEccccchhhCceEEEEEEcCcCceEEEEEEEEe
Confidence 125688888874 67888888899999987665555554
No 70
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.86 E-value=2.6e-21 Score=137.32 Aligned_cols=135 Identities=19% Similarity=0.305 Sum_probs=107.0
Q ss_pred cceEEEe-----ecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEE-ee
Q psy12131 2 KEIELLY-----NRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNV-YA 75 (245)
Q Consensus 2 ~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~ 75 (245)
+|+.+.. +..+|.|.+++.+|+|.|+|.+.+..|. ....+.|.|..+|.+...+....+..|+.+.|.|.+ .+
T Consensus 70 ~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~-~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~~g 148 (214)
T 3jz7_A 70 GRVHFTSNDVKSGDASINVTNLQLSDIGTYQCKVKKAPGV-ANKKFLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEG 148 (214)
T ss_dssp TTEEESCSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEE-EEEEEEEEEECCCBSCEEEEESCCBTTCCEEEEEECSBC
T ss_pred cceEEeccCccCCcccEEEccCChhhCeEEEEEEEeCCCc-cccEEEEEEEcCCCCceeeeecceecCCcEEEEecCCCC
Confidence 3555544 4567999999999999999999998776 688899999988887655544457889999999999 88
Q ss_pred cCCCeEEEEECC--EEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEecC
Q psy12131 76 NPPAKVEWFRDG--TAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIP 141 (245)
Q Consensus 76 ~~~~~~~w~~~~--~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~ 141 (245)
.|.|.+.|++++ ..+...... ......|.|.++..+|.|.|+|.|.|..|.....+.|.+.+
T Consensus 149 ~p~~~v~W~~~~~~~~~~~~~~~----~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 212 (214)
T 3jz7_A 149 SLPLQFEWQKLSDSQTMPTPWLA----EMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVP 212 (214)
T ss_dssp CSSCEEEEEECSTTCCCCGGGGG----GTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCBC
T ss_pred CCCCEEEEEECCCCCccCcccee----ccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEeC
Confidence 999999999954 333221111 11234899999999999999999999999998888888763
No 71
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.86 E-value=4.1e-20 Score=128.69 Aligned_cols=134 Identities=23% Similarity=0.434 Sum_probs=108.6
Q ss_pred ceEEEeecceEEEeccCCCCCEEEEEEEEcCCCCc-eeeEEEEEEecCCeEEeecc--eEEecCCCeEEEEEEEeecCCC
Q psy12131 3 EIELLYNRESLDLDRVTLKLAGLYQCIASNNIGES-TSKNFIVNVIYPPEVSVEKQ--WIHTAPDMRAEIICNVYANPPA 79 (245)
Q Consensus 3 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~~l~v~~~p~~~~~~~--~~~~~~g~~~~l~C~~~~~~~~ 79 (245)
|+.+..+ ..|.|.+++.+|+|.|+|.+.+..+.. ....+.+.|..+|.+...+. ...+..|+.+.|.|.+.+.|.+
T Consensus 50 ~~~~~~~-~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~ 128 (189)
T 2v5t_A 50 RFAMLAN-NNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEP 128 (189)
T ss_dssp TEEECTT-SCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEEEEEEECSCCEEEEETTSCCCEEEECEEEEESCC
T ss_pred eEEEecC-CCEEEeeCCHhHCcEEEEEEEEcCCCceEEEEEEEEecCCCCcccccccccccccCCCcEEEEEEEccCCCC
Confidence 4444443 459999999999999999999887542 44667788888887766543 4567789999999999999999
Q ss_pred eEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEe
Q psy12131 80 KVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSG 139 (245)
Q Consensus 80 ~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~ 139 (245)
.+.|++++..+....++.+.. ....|.|.++..+|.|.|+|.+.|..|.....+.+.+
T Consensus 129 ~v~W~~~g~~~~~~~~~~~~~--~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 186 (189)
T 2v5t_A 129 AISWFRNGKLIEENEKYILKG--SNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQV 186 (189)
T ss_dssp EEEEEETTEECCCSSSEEEET--TTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred eEEEEECCEECcCCCcEEEec--CCCEEEEcCCChhhCeeEEEEEEeCCCceeEEEEEEE
Confidence 999999999888776665543 3457999999999999999999999998888777665
No 72
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.86 E-value=1.5e-20 Score=137.14 Aligned_cols=207 Identities=14% Similarity=0.136 Sum_probs=108.9
Q ss_pred cCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecC-----CCeEEEEECC--EEe
Q psy12131 18 VTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANP-----PAKVEWFRDG--TAI 90 (245)
Q Consensus 18 ~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~-----~~~~~w~~~~--~~~ 90 (245)
++.+|+|.|+|.|. |. ....+.+.+..+|.+...+..+.+.+|+.+.|.|.+.+.+ .+.+.|+++. ..+
T Consensus 11 v~~~dsg~Y~C~a~---g~-~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~ 86 (254)
T 2c1o_A 11 VRPGTSVKLSCKAS---GY-SFTNYWMNWLRELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSP 86 (254)
T ss_dssp -------------------------------CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCC
T ss_pred ecCCccEEEEEcCc---hh-hhhhhhhheeeceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCc
Confidence 88999999999999 43 2334445555677777778888999999999999999887 4899999732 211
Q ss_pred ------------ccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeE---EEEEEEecCCCCccccC---ccc
Q psy12131 91 ------------TLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQ---QFIQLSGIPNIPVFQKS---SRR 152 (245)
Q Consensus 91 ------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~---~~~~~~~~~~~p~~~~~---~~~ 152 (245)
....++.+...+....|.|.++..+|.|.|.|.+.|..+... ..+.+.....+|.+... ...
T Consensus 87 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~ 166 (254)
T 2c1o_A 87 KRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRADAAPTVSIFPPSSEQ 166 (254)
T ss_dssp EEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCCBCCEEEEECCCHHH
T ss_pred eEEEEeccccCCCccceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECCCCCCCeeEeecCChhh
Confidence 112456655555667899999999999999999999764321 13344333334443321 112
Q ss_pred cCCCeeEEEEEeCCC-CCceEEEEEEEeec-CCCC-eEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCC
Q psy12131 153 LGPDGYRLVWQVDTY-SGIIQYLLKFRERE-ELTP-WRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGW 229 (245)
Q Consensus 153 ~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~ 229 (245)
..+..+.|.|.+.+. ++... ..|+++.. .... ........... ..-.....+.|..+...+.+.|.|.|.|....
T Consensus 167 ~~g~~v~l~C~~~g~~p~~~~-v~W~k~g~~l~~~~~~~~~~~~~~~-g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~ 244 (254)
T 2c1o_A 167 LTSGGASVVCFLNNFYPKDIN-VKWKIDGSERQNGVLNSWTDQDSKD-STYSMSSTLTLTKDEYERHNSYTCEATHKTST 244 (254)
T ss_dssp HHTTEEEEEEEEEEEBSSCCE-EEEEESSSEECTTEEEEECCCCTTT-CCEEEEEEEEEEHHHHHTCCEEEEEEECTTCS
T ss_pred ccCCcEEEEEEEecccCCCcE-EEEEECCCcccCcceeccccccCCC-CcEEEEEEEEeccccccCCCeEEEEEEcCCCC
Confidence 346699999999653 33222 23555543 1111 11111111100 00011345777777665566667779998765
Q ss_pred C
Q psy12131 230 S 230 (245)
Q Consensus 230 ~ 230 (245)
.
T Consensus 245 ~ 245 (254)
T 2c1o_A 245 S 245 (254)
T ss_dssp S
T ss_pred C
Confidence 4
No 73
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.86 E-value=2.1e-20 Score=130.39 Aligned_cols=122 Identities=20% Similarity=0.345 Sum_probs=103.0
Q ss_pred ecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCE
Q psy12131 9 NRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGT 88 (245)
Q Consensus 9 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~ 88 (245)
....|.|.+++.+|+|.|+|.+.+..+...+..+.|.|..+|.+...+....+..|+.+.|.|.+.+.|.|.+.|++++.
T Consensus 60 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~ 139 (191)
T 1epf_A 60 DSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGR 139 (191)
T ss_dssp TEEEEEECSCCGGGCEEEEEEEEETTTEEEEEEEEEEEECCSEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEETTE
T ss_pred CceEEEEccCCcccCEEEEEEEEcCCCcceEEEEEEEeecCceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEECCE
Confidence 34679999999999999999999988555788899999999999888877888999999999999999999999999998
Q ss_pred EeccC--CcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEE
Q psy12131 89 AITLG--GRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQ 133 (245)
Q Consensus 89 ~~~~~--~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~ 133 (245)
.+... .++.... ...|.|.++..+|.|.|+|.|.|..+....
T Consensus 140 ~~~~~~~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 183 (191)
T 1epf_A 140 DVILKKDVRFIVLS---NNYLQIRGIKKTDEGTYRCEGRILARGEIN 183 (191)
T ss_dssp EGGGGCCTTEEECT---TSCEEETTCCGGGCEEEEEEEEEGGGTEEE
T ss_pred EeeccCCceEEEec---CCeEEECCCChhhCEEEEEEEEEecceeEE
Confidence 87643 2343332 237999999999999999999998864433
No 74
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.86 E-value=2.4e-20 Score=130.43 Aligned_cols=181 Identities=19% Similarity=0.201 Sum_probs=128.1
Q ss_pred cCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCC--cEEEEecCceeEEEEccCCCCCCeEEEEEEE
Q psy12131 48 YPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGG--RIDMHVSSEKHSLLVRHIKDTDFGNYMCQAS 125 (245)
Q Consensus 48 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 125 (245)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... .+.+........|.|.++...|.|.|.|.+.
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 83 (194)
T 2a38_A 4 QAPTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKAT 83 (194)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCeEEccCCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEEE
Confidence 46777777777888999999999999999999999999998776543 4455555567899999999999999999999
Q ss_pred eCCceeEEEEEEEecC--CCCccccC---ccccCCCeeEEEEEeCCCCCceEEEEEEEeec--CCCCeEEEeeCCCCCCC
Q psy12131 126 NNLGSSQQFIQLSGIP--NIPVFQKS---SRRLGPDGYRLVWQVDTYSGIIQYLLKFRERE--ELTPWRNIVIPSDGSLA 198 (245)
Q Consensus 126 n~~g~~~~~~~~~~~~--~~p~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 198 (245)
|..|.....+.+.+.. .+|.+... .....+..+.|.|.+.+.++.. ..|+++.. .......+.....
T Consensus 84 n~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~--v~W~~~~~~~~~~~~~~~~~~~~---- 157 (194)
T 2a38_A 84 NGSGQATSTAELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPV--VKFYRDGAEIQSSLDFQISQEGD---- 157 (194)
T ss_dssp ETTEEEEEEEEEEEECCCEEEEEEECCCCEEECTTEEEEEEEEEEEESCCE--EEEEETTEECCCSSSEEEEEETT----
T ss_pred cCCceEeEEEEEEEccCCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCCe--EEEEECCEECCCCCcEEEEEcCC----
Confidence 9988877766665542 34443322 2346788999999996654432 33555433 1111111111111
Q ss_pred cceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceEE
Q psy12131 199 GPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYVF 238 (245)
Q Consensus 199 ~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~ 238 (245)
...+.|.++...+.+.|+|.|.|..|....+..+.+
T Consensus 158 ----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 193 (194)
T 2a38_A 158 ----LYSLLIAEAYPEDSGTYSVNATNSVGRATSTAELLV 193 (194)
T ss_dssp ----EEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ----EEEEEECCCChhcCeEEEEEEEeCCCceEEEEEEEE
Confidence 146788888888888999999999998665555544
No 75
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.86 E-value=6.2e-20 Score=130.26 Aligned_cols=123 Identities=27% Similarity=0.503 Sum_probs=101.3
Q ss_pred cceEEEecc-CCCCCEEEEEEEEcCCCCceeeEEEEEEecC-------CeEEeecceEEecCCCeEEEEEEEeecCCCeE
Q psy12131 10 RESLDLDRV-TLKLAGLYQCIASNNIGESTSKNFIVNVIYP-------PEVSVEKQWIHTAPDMRAEIICNVYANPPAKV 81 (245)
Q Consensus 10 ~~~L~i~~~-~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~-------p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~ 81 (245)
+..|.|.++ +.+|+|.|+|.+.|..|. ....+.|.|..+ |.+...+....+..|+.+.|.|.+.|.|.|.+
T Consensus 62 ~~~L~i~~v~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v 140 (212)
T 2yd6_A 62 GSVLRIQPLRTPRDEAIYECVASNNVGE-ISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEI 140 (212)
T ss_dssp EEEEEECSCCTTTTCEEEEEEEEETTEE-EEEEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCCEE
T ss_pred ceEEEEeccCCCCCCeEEEEEEEcCCCc-EEEEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCCeE
Confidence 356999999 599999999999998877 677888888754 66666666677889999999999999999999
Q ss_pred EEEECCEEeccC---CcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEE
Q psy12131 82 EWFRDGTAITLG---GRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQ 133 (245)
Q Consensus 82 ~w~~~~~~~~~~---~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~ 133 (245)
.|++++..+... .++..........|.|.++..+|.|.|+|.|.|..|....
T Consensus 141 ~W~~~g~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s 195 (212)
T 2yd6_A 141 TWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQGKYECVATNSAGTRYS 195 (212)
T ss_dssp EEEETTEEC------CCEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEC
T ss_pred EEEECCccccCcCCCceEEEEecCCeEEEEEcCCCcccCEEEEEEEECCCCcccc
Confidence 999999887653 3444444455689999999999999999999999997654
No 76
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.85 E-value=1.1e-19 Score=128.93 Aligned_cols=126 Identities=19% Similarity=0.397 Sum_probs=104.3
Q ss_pred ceEEEeccCC-CCCEEEEEEEEcCCCCceeeEEEEEEecC-------CeEEeecceEEecCCCeEEEEEEEeecCCCeEE
Q psy12131 11 ESLDLDRVTL-KLAGLYQCIASNNIGESTSKNFIVNVIYP-------PEVSVEKQWIHTAPDMRAEIICNVYANPPAKVE 82 (245)
Q Consensus 11 ~~L~i~~~~~-~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~-------p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~ 82 (245)
..|.|.+++. +|+|.|+|.+.|..|...+..+.|.|..+ |.+...+....+..|+.+.|.|.+.+.|.+.+.
T Consensus 64 ~~L~i~~v~~~~d~G~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~ 143 (212)
T 2yd1_A 64 SILRIEPVRAGRDDAPYECVAENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIY 143 (212)
T ss_dssp EEEEESSCCTTTTCSEEEEEEECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCCEEE
T ss_pred EEEEEEecCCCCcCceEEEEEEeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCCeEE
Confidence 5799999999 99999999999988775677888888865 677777767778899999999999999999999
Q ss_pred EEECCEEeccC-CcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEE-EEEEec
Q psy12131 83 WFRDGTAITLG-GRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQF-IQLSGI 140 (245)
Q Consensus 83 w~~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~-~~~~~~ 140 (245)
|++++..+... .++.+. ...|.|.++..+|.|.|+|.|.|..|..... +.|.+.
T Consensus 144 W~~~~~~~~~~~~~~~~~----~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~ 199 (212)
T 2yd1_A 144 WIKNQTKVDMSNPRYSLK----DGFLQIENSREEDQGKYECVAENSMGTEHSKATNLYVK 199 (212)
T ss_dssp EEETTEECCTTSTTEEEE----TTEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred EEECCeEcccCCCeEEcc----CCeEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEE
Confidence 99999888753 344332 2379999999999999999999999987643 455544
No 77
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.85 E-value=2.2e-19 Score=134.31 Aligned_cols=188 Identities=17% Similarity=0.210 Sum_probs=135.6
Q ss_pred cCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccC-CcEEEE-ecCceeEEEEccCCCCCCeEEEEEEE
Q psy12131 48 YPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLG-GRIDMH-VSSEKHSLLVRHIKDTDFGNYMCQAS 125 (245)
Q Consensus 48 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~-~~~~~~-~~~~~~~l~i~~~~~~d~g~y~C~~~ 125 (245)
.+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|++++..+... .++.+. ..+....|.|.++..+|.|.|+|.+.
T Consensus 3 ~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 82 (305)
T 2nzi_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRAT 82 (305)
T ss_dssp CCCEEEECCCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEE
T ss_pred CCCeeeecccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEEE
Confidence 3688887888888999999999999999999999999999887654 344443 34456689999999999999999999
Q ss_pred eCCceeEEEEEEEecCCC----Cccc---cCccccCCCeeEEEEEeCCCCCceEEEEEEEeec--CCCCeEEEeeCCCCC
Q psy12131 126 NNLGSSQQFIQLSGIPNI----PVFQ---KSSRRLGPDGYRLVWQVDTYSGIIQYLLKFRERE--ELTPWRNIVIPSDGS 196 (245)
Q Consensus 126 n~~g~~~~~~~~~~~~~~----p~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 196 (245)
|..|.....+.|.+...| |... .......+..+.|.|.+.+.++. . ..|+++.. .......+.....
T Consensus 83 n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p-~-i~W~~~~~~~~~~~~~~~~~~~~-- 158 (305)
T 2nzi_A 83 NQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDP-V-ITWQKGQDLIDNNGHYQVIVTRS-- 158 (305)
T ss_dssp ETTEEEEEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCC-E-EEEEESSSBCCSSSSCEEEECSS--
T ss_pred cCCCCccceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCC-E-EEEEECCEECCCCCcEEEEEcCC--
Confidence 999987777777664222 1111 11234568899999999665433 2 23444433 1111222221111
Q ss_pred CCcceeeeEEEecC-CCCCceEEEEEEEEecCCCCCCCcceEEecCCCCC
Q psy12131 197 LAGPIYTQSYNITG-LQLFTQYEASVLAKNRFGWSRPSKAYVFATEGAET 245 (245)
Q Consensus 197 ~~~~~~~~~~~i~~-l~~~~~y~~~v~a~N~~G~~~~s~~~~~~t~~~~~ 245 (245)
...+.|.+ +...+.|.|+|.|.|..|....+..+.+...|.+|
T Consensus 159 ------~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~p 202 (305)
T 2nzi_A 159 ------FTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPP 202 (305)
T ss_dssp ------EEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCCC
T ss_pred ------ceEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCCCC
Confidence 26788888 99999999999999999998887778887776654
No 78
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.85 E-value=1e-19 Score=125.95 Aligned_cols=120 Identities=22% Similarity=0.273 Sum_probs=101.5
Q ss_pred ceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCCC-eEEEEECCEE
Q psy12131 11 ESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPPA-KVEWFRDGTA 89 (245)
Q Consensus 11 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~-~~~w~~~~~~ 89 (245)
..|.|.+++.+|+|.|+|.+.+..+...+..+.|.|..+|.+...+....+..|+.+.|.|.+.+.|.| .+.|++++..
T Consensus 60 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~ 139 (182)
T 1rhf_A 60 GFLSLKSVERSDAGRYWCQVEDGGETEISQPVWLTVEGVPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTK 139 (182)
T ss_dssp EEEEESSCCGGGCEEEEEEESSCTTCEECCCEEEEEECSCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEE
T ss_pred EEEEEeecCcccCeEEEEEEEcCCCcEEEEEEEEEEecCCeEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeE
Confidence 579999999999999999999987665677899999999999888877888999999999999999999 9999999988
Q ss_pred eccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEE-EEEEEe
Q psy12131 90 ITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQ-FIQLSG 139 (245)
Q Consensus 90 ~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~-~~~~~~ 139 (245)
+..... ....|.|.++ .|.|.|+|.+.|..|.... .+.|.+
T Consensus 140 ~~~~~~-------~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 140 IGGPAP-------SPSVLNVTGV--TQSTMFSCEAHNLKGLASSRTATVHL 181 (182)
T ss_dssp CSCSEE-------SSEEEEECCC--SSCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CCCCCC-------CceEEEEecc--ccCeEEEEEEECCCCCcccceEEEEe
Confidence 754321 3457888887 4899999999999987743 555543
No 79
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.85 E-value=1.1e-19 Score=135.04 Aligned_cols=217 Identities=12% Similarity=0.048 Sum_probs=132.4
Q ss_pred ceEEEeccCCCCCEEEEEEEEcCCCCc--eeeEEEEEEecCCeEEe--ecc--eEEecCCCeEEEEEEEeecCCCeEEEE
Q psy12131 11 ESLDLDRVTLKLAGLYQCIASNNIGES--TSKNFIVNVIYPPEVSV--EKQ--WIHTAPDMRAEIICNVYANPPAKVEWF 84 (245)
Q Consensus 11 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~~~l~v~~~p~~~~--~~~--~~~~~~g~~~~l~C~~~~~~~~~~~w~ 84 (245)
+.|.|.+++.+|+|.|+|.|.|..|.. .+..+.|.|..++.... .+. ...+.+|+.+.|.|.+. .|.|.+.|+
T Consensus 51 ~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~ 129 (289)
T 3mjg_X 51 SVLTLTNLTGLDTGEYFCTHNDSRGLETDERKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVT-DPQLVVTLH 129 (289)
T ss_dssp EEEEECSCCGGGCEEEEEECCC------CCCEEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBS-CTTSCEEEE
T ss_pred EEEEEccCChhhCEEEEEEEcccCCCCcCcEEeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcC-CCCceEEEE
Confidence 569999999999999999999987652 34455555553332221 111 26688999999999998 677889998
Q ss_pred ECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEE-EEEEEecC-CCCcccc---CccccCCCeeE
Q psy12131 85 RDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQ-FIQLSGIP-NIPVFQK---SSRRLGPDGYR 159 (245)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~-~~~~~~~~-~~p~~~~---~~~~~~~~~~~ 159 (245)
+.+........+ .. .. .+. ...|.|.|+|.+.|..+.... .+.+.+.. .+|.+.. ......++.+.
T Consensus 130 ~~~~~~~~~~~~---~~-~~-~~~----~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~i~~~~~~~~v~~G~~v~ 200 (289)
T 3mjg_X 130 EKKGDVALPVPY---DH-QR-GFS----GIFEDRSYICKTTIGDREVDSDAYYVYRLQVSSINVSVNAVQTVVRQGENIT 200 (289)
T ss_dssp ESSCCSCCCCCE---ET-TT-EEE----ECCCSSEEEEEEEETTEEEECCCEEEEECCCCCCCCEEEESCSEEETTSCEE
T ss_pred eCCCCCccceee---cC-Cc-Cee----eeccCcEEEEEEEeCCceeeeeeEEEEecCCCCCCcEEeCCcceeEcCCCEE
Confidence 865222211111 00 11 111 246899999999987765433 33444433 2333222 13457799999
Q ss_pred EEEEeCCCCCceEEEEEEEeec-CCCCeE-EEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceE
Q psy12131 160 LVWQVDTYSGIIQYLLKFRERE-ELTPWR-NIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYV 237 (245)
Q Consensus 160 l~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~ 237 (245)
|.|.+.+++++ .+ .|+++.. ...... ....... ........+.|.++...+.+.|+|.|.|.+|....+..+.
T Consensus 201 L~C~~~g~p~p-~v-~W~~~~~~~~~~~~~~~~~~~~---~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~ 275 (289)
T 3mjg_X 201 LMCIVIGNEVV-NF-EWTYPRKESGRLVEPVTDFLLD---MPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAIN 275 (289)
T ss_dssp EEEEEESCSSB-EE-EEECTTSSSSCCCCCEEEESCT---TTTEEEEEEEESSCCSSCCEEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEECCCCCc-ce-EEEcCCccCCCcccccccccCC---cceEEEEEEEEcccChhhCcEEEEEeecCCCCceeEEEEE
Confidence 99999775433 33 2443322 111011 1111110 0122347799999999999999999999999988888777
Q ss_pred EecCC
Q psy12131 238 FATEG 242 (245)
Q Consensus 238 ~~t~~ 242 (245)
+.-.+
T Consensus 276 v~~~~ 280 (289)
T 3mjg_X 276 ITVVE 280 (289)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 76554
No 80
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.85 E-value=3.1e-20 Score=131.60 Aligned_cols=136 Identities=22% Similarity=0.457 Sum_probs=104.8
Q ss_pred ceEEEeecceEEEeccCCCCCEEEEEEEEcCCCCc-eeeEEEEEEecCCeEEeecceEEecCCCeEEEEEE-EeecCCCe
Q psy12131 3 EIELLYNRESLDLDRVTLKLAGLYQCIASNNIGES-TSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICN-VYANPPAK 80 (245)
Q Consensus 3 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~-~~~~~~~~ 80 (245)
|+.+.. ..|.|.+++.+|+|.|+|.+.+..|.. .+..+.|.|..+|.+...+....+..|+.+.|.|. +.+.|.|.
T Consensus 59 r~~~~~--~~L~i~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~ 136 (212)
T 1f97_A 59 RVTFSS--SGITFSSVTRKDNGEYTCMVSEEGGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSE 136 (212)
T ss_dssp TEEEET--TEEEESCCCGGGCEEEEEEEEETTSSSEEEEEEEEEEEBCCCCCEEECCSEEETTSCEEEEEECSCCBSCCE
T ss_pred cEEeec--eeEEEcccCcccCeEEEEEEEccCCCcccEEEEEEEEEcCCCCcccCCccccCCCCeEEEEEEcccCcCCCE
Confidence 444443 679999999999999999999987632 57788899998888766555556789999999999 78999999
Q ss_pred EEEEECCE-EeccCCcE-------EEEecCceeEEEEccCCCCCCeEEEEEEEeCCcee--EEEEEEEec
Q psy12131 81 VEWFRDGT-AITLGGRI-------DMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSS--QQFIQLSGI 140 (245)
Q Consensus 81 ~~w~~~~~-~~~~~~~~-------~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~--~~~~~~~~~ 140 (245)
+.|++++. .+...... ..........|.|.++..+|.|.|+|.|.|..|.. ...+.|.+.
T Consensus 137 i~W~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~ 206 (212)
T 1f97_A 137 YSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAV 206 (212)
T ss_dssp EEEEETTEESBC-----CBSCSSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEE
T ss_pred EEEEeCCcccccccccccccccCceeEecCCCceEEEEecChhhCcEEEEEEccccCCccccceEEEEEE
Confidence 99999998 76653321 12222345689999999999999999999999877 445555544
No 81
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.85 E-value=5.9e-19 Score=125.16 Aligned_cols=181 Identities=15% Similarity=0.178 Sum_probs=129.6
Q ss_pred cCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEec-cCCcEEEEe-cCceeEEEEccCCC-CCCeEEEEEE
Q psy12131 48 YPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAIT-LGGRIDMHV-SSEKHSLLVRHIKD-TDFGNYMCQA 124 (245)
Q Consensus 48 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~-~~~~~~~~~-~~~~~~l~i~~~~~-~d~g~y~C~~ 124 (245)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+. ...++.+.. .+....|.|.++.. .|.|.|+|.+
T Consensus 5 ~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~~ 84 (212)
T 2yd1_A 5 HPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVA 84 (212)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEEE
T ss_pred CCCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEEE
Confidence 47888888888889999999999999999999999999999886 445555433 34457899999999 9999999999
Q ss_pred EeCCce-eEEEEEEEecCC------CCccccC---ccccCCCeeEEEEEeCCCCCceEEEEEEEeec---CCCCeEEEee
Q psy12131 125 SNNLGS-SQQFIQLSGIPN------IPVFQKS---SRRLGPDGYRLVWQVDTYSGIIQYLLKFRERE---ELTPWRNIVI 191 (245)
Q Consensus 125 ~n~~g~-~~~~~~~~~~~~------~p~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 191 (245)
.|..|. ....+.+.+... +|.+... .....++.+.|.|.+.+.++.. ..|+++.. ........
T Consensus 85 ~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~--i~W~~~~~~~~~~~~~~~~-- 160 (212)
T 2yd1_A 85 ENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPN--IYWIKNQTKVDMSNPRYSL-- 160 (212)
T ss_dssp ECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCCE--EEEEETTEECCTTSTTEEE--
T ss_pred EeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCCe--EEEEECCeEcccCCCeEEc--
Confidence 999887 566666665432 1333222 2345688999999997665432 33555433 00111111
Q ss_pred CCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCC-cceEEecCC
Q psy12131 192 PSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPS-KAYVFATEG 242 (245)
Q Consensus 192 ~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s-~~~~~~t~~ 242 (245)
....+.|.++...+.+.|+|.|.|..|....+ ..+.|....
T Consensus 161 ----------~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~~~ 202 (212)
T 2yd1_A 161 ----------KDGFLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKVRR 202 (212)
T ss_dssp ----------ETTEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred ----------cCCeEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEecc
Confidence 11368899999999999999999999987654 566666544
No 82
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.84 E-value=1.1e-18 Score=123.81 Aligned_cols=177 Identities=15% Similarity=0.168 Sum_probs=125.7
Q ss_pred ecCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEe-cCceeEEEEccCC-CCCCeEEEEEE
Q psy12131 47 IYPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHV-SSEKHSLLVRHIK-DTDFGNYMCQA 124 (245)
Q Consensus 47 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~-~~d~g~y~C~~ 124 (245)
..+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|++++..+.......... .+....|.|.++. ..|.|.|+|.+
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a 83 (212)
T 2yd6_A 4 ETPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVA 83 (212)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEE
T ss_pred CCCCeEEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEE
Confidence 357788777778888999999999999999999999999999887654333322 3346789999994 99999999999
Q ss_pred EeCCceeEEEEEEEecCC------CCccccC---ccccCCCeeEEEEEeCCCCCceEEEEEEEeec--CC----CCeEEE
Q psy12131 125 SNNLGSSQQFIQLSGIPN------IPVFQKS---SRRLGPDGYRLVWQVDTYSGIIQYLLKFRERE--EL----TPWRNI 189 (245)
Q Consensus 125 ~n~~g~~~~~~~~~~~~~------~p~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~ 189 (245)
.|..|.....+.+.+... .|.+... .....++.+.|.|.+.+.++. . ..|+++.. .. .... .
T Consensus 84 ~n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p-~-v~W~~~g~~l~~~~~~~~~~-~ 160 (212)
T 2yd6_A 84 SNNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDP-E-ITWFKDFLPVDTSNNNGRIK-Q 160 (212)
T ss_dssp EETTEEEEEEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCC-E-EEEEETTEEC------CCEE-E
T ss_pred EcCCCcEEEEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCC-e-EEEEECCccccCcCCCceEE-E
Confidence 999988777776666422 2333221 234568899999999766443 2 33555433 00 1111 1
Q ss_pred eeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCc
Q psy12131 190 VIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSK 234 (245)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~ 234 (245)
.... ....+.|.++...+.+.|+|.|.|.+|....+.
T Consensus 161 ~~~~--------~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~ 197 (212)
T 2yd6_A 161 LRSE--------SIGALQIEQSEESDQGKYECVATNSAGTRYSAP 197 (212)
T ss_dssp EEET--------TEEEEEECSCCGGGCEEEEEEEEETTEEEECCC
T ss_pred EecC--------CeEEEEEcCCCcccCEEEEEEEECCCCcccccc
Confidence 1101 126788999999999999999999999865443
No 83
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.84 E-value=1.1e-19 Score=128.43 Aligned_cols=132 Identities=22% Similarity=0.304 Sum_probs=103.2
Q ss_pred ceEEEeecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecC---CeEEeecceEEecCCCeEEEEEEEeecCCC
Q psy12131 3 EIELLYNRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYP---PEVSVEKQWIHTAPDMRAEIICNVYANPPA 79 (245)
Q Consensus 3 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~---p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~ 79 (245)
|+.+..+ .+|.|.+++.+|+|.|+|.+.+..+......+.|.|..+ |.+...+.. +..|+.+.|.|.+.+.| |
T Consensus 64 r~~~~~~-~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~--~~~g~~v~l~C~~~~~p-p 139 (208)
T 3r4d_A 64 REIIYSN-GSLLFQMITMKDMGVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTT--VKELDSVTLTCLSNDIG-A 139 (208)
T ss_dssp SEEECTT-SCEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEEECCCCCCEEEESCSS--CCTTCCEEEEEECSCTT-C
T ss_pred eeEEecC-CeEEEccccccCCeEEEEEEEcccCceeEEEEEEEeccCCCCCEEecCCce--EeeCCCEEEEEECCCCC-C
Confidence 4444433 459999999999999999999986544677888888765 555444433 78899999999999865 8
Q ss_pred eEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEE-EEEEEec
Q psy12131 80 KVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQ-FIQLSGI 140 (245)
Q Consensus 80 ~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~-~~~~~~~ 140 (245)
.+.|++++..+....++.+... ...|.|.++..+|.|.|+|.+.|..|.... .+++.+.
T Consensus 140 ~i~W~~~g~~l~~~~~~~~~~~--~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~ 199 (208)
T 3r4d_A 140 NIQWLFNSQSLQLTERMTLSQN--NSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDII 199 (208)
T ss_dssp EEEEEETTEECCCCSSEEEETT--TTEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC
T ss_pred ceEEEECCEeCCCCCCeEEcCC--CCEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEE
Confidence 9999999999887776665433 258999999999999999999999987554 4455443
No 84
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.84 E-value=5.2e-20 Score=135.11 Aligned_cols=197 Identities=13% Similarity=0.066 Sum_probs=129.0
Q ss_pred ecceEEEecc---CCCCCEE--EEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEE
Q psy12131 9 NRESLDLDRV---TLKLAGL--YQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEW 83 (245)
Q Consensus 9 ~~~~L~i~~~---~~~d~G~--Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w 83 (245)
.+..|.+..+ +.+|+|. |+|.+.|..|. ....+.|.|...|..........+.+|+.+.|.|.+. |.+.+.|
T Consensus 54 ~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~-~~~~~~l~V~~~p~p~~~~~~~~v~~G~~v~l~C~~~--p~~~i~W 130 (265)
T 2oz4_A 54 GNDSFSAKASVSVTAEDEGTQRLTCAVILGNQS-QETLQTVTIYSFPAPNVILTKPEVSEGTEVTVKCEAH--PRAKVTL 130 (265)
T ss_dssp CSSEEEEEEEEEECGGGCEEEEEEEEEEETTEE-EEEEEEEEEECCCCCEEEESCSEEETTCEEEEEEECC--TTSEEEE
T ss_pred CCCeEEEEeecccccccCCcceEEEEEecCCCC-cEEEEEEEEeCCCCceeecCCceecCCCcEEEEEEcc--CCCEEEE
Confidence 3445777766 8888885 99999998877 6778888987643322233344567899999999998 8899999
Q ss_pred EECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCC-ceeE---EEEEEEec--CCCCcccc--CccccCC
Q psy12131 84 FRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNL-GSSQ---QFIQLSGI--PNIPVFQK--SSRRLGP 155 (245)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~-g~~~---~~~~~~~~--~~~p~~~~--~~~~~~~ 155 (245)
++..+... +..+.|.+..+..+|.|.|+|.+.|.. |... ..+.+.+. |....... ......+
T Consensus 131 --~g~~~~~~--------~~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~~p~~~~v~~g 200 (265)
T 2oz4_A 131 --NGVPAQPL--------GPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPEN 200 (265)
T ss_dssp --SSCSSSCC--------SSEECCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEEEEEECCGGGSCSEEEEETT
T ss_pred --CCEEccCC--------CCcEEEEEccccccCCceEEEEEEcCCCCCcccccccEEEEEEeCCccccccCCCccEEcCC
Confidence 77665322 234568888899999999999998643 5443 44444443 22221111 1234678
Q ss_pred CeeEEEEEeCCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcc
Q psy12131 156 DGYRLVWQVDTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKA 235 (245)
Q Consensus 156 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~ 235 (245)
+.+.|.|.+.++++.. ..|+++.. . ...... . + .+...+.+.|+|.|.|..|....+..
T Consensus 201 ~~~~l~C~~~g~P~p~--i~W~~~~~------~-~~~~g~--------~-~---~v~~~d~G~Y~C~a~N~~G~~~~~~~ 259 (265)
T 2oz4_A 201 SQQTPMCQAWGNPLPE--LKCLKDGT------F-PLPIGE--------S-V---TVTRDLEGTYLCRARSTQGEVTREVT 259 (265)
T ss_dssp CEECCCCCCEEESCCE--EEEEETTT------E-ECCTTS--------C-E---ECCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred CeEEEEeECccCCCCe--EEEEECCc------c-cCCCCc--------E-E---EeehhhCeEEEEEEECCCCcEEEEEE
Confidence 9999999997665432 23444422 1 111111 1 1 25557777788889999998766666
Q ss_pred eEEe
Q psy12131 236 YVFA 239 (245)
Q Consensus 236 ~~~~ 239 (245)
+.+.
T Consensus 260 l~V~ 263 (265)
T 2oz4_A 260 VNVL 263 (265)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6554
No 85
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.84 E-value=4.9e-20 Score=144.94 Aligned_cols=223 Identities=11% Similarity=0.013 Sum_probs=134.9
Q ss_pred cceEEEee----cceEEEeccCCCCCEEEEEEEEcCCCC--ceeeEEEEEEec----CCeEEeecceEEecCCCeEEEEE
Q psy12131 2 KEIELLYN----RESLDLDRVTLKLAGLYQCIASNNIGE--STSKNFIVNVIY----PPEVSVEKQWIHTAPDMRAEIIC 71 (245)
Q Consensus 2 ~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C 71 (245)
+|+.+..+ ..+|.|.+++.+|+|.|+|.+.+..+. .....+.|.|.. +|.+...+....+..|+.+.|.|
T Consensus 66 ~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C 145 (444)
T 1igt_B 66 GRFTISRDNAKNTLYLQMSRLKSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGC 145 (444)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCSSCCCSSCEEEEE
T ss_pred CceEEEEeCCCCeEEEEECCCCHHHCEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEecccccCCCCCcEEEEE
Confidence 47777653 357999999999999999999987543 123346777763 45554333223347899999999
Q ss_pred EEeec-CCC-eEEEEECCEEeccCCcEEEEecC---ceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEe-------
Q psy12131 72 NVYAN-PPA-KVEWFRDGTAITLGGRIDMHVSS---EKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSG------- 139 (245)
Q Consensus 72 ~~~~~-~~~-~~~w~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~------- 139 (245)
.+.|. |.| .+.|++++..+...........+ ..+.|.|..+...| |.|.|.+.|..+.......+..
T Consensus 146 ~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~i~~~~~~~~~ 224 (444)
T 1igt_B 146 LVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTIKP 224 (444)
T ss_dssp EEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEEEEEECCCCCCSCCC
T ss_pred EEcceeCCCcEEEEecCCCCCCeEecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcceEEEeccCCCCccc
Confidence 99885 776 99999987652110000000011 12468899998889 9999999999887544443322
Q ss_pred ----------cCCCCcc-ccC--cc--ccCCCeeEEEEEeCCCC---CceEEEEEEEeec---CCCCeEEEeeCCCCCCC
Q psy12131 140 ----------IPNIPVF-QKS--SR--RLGPDGYRLVWQVDTYS---GIIQYLLKFRERE---ELTPWRNIVIPSDGSLA 198 (245)
Q Consensus 140 ----------~~~~p~~-~~~--~~--~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 198 (245)
...+|.. ... .. ...|+.+.|.|.+.+.+ +...+ .|+++.. .............
T Consensus 225 ~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v-~W~k~~~~~~~~~~~~~~~~~~~---- 299 (444)
T 1igt_B 225 CPPCKCPAPNLLGGPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQI-SWFVNNVEVHTAQTQTHREDYNS---- 299 (444)
T ss_dssp CCCCSCCCSCCCCCCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEE-EEEETTEECSSTTCBCCEEECSS----
T ss_pred CCccccCCcccCCCceEEecCCchhheeecCCCcEEEEEEeecccCCCCeEE-EEEECCccccCcccccceeCCCC----
Confidence 1112322 111 11 36688999999996542 32232 3555433 0000000000000
Q ss_pred cceeeeEEEecCCCCCceEEEEEEEEecCCCC
Q psy12131 199 GPIYTQSYNITGLQLFTQYEASVLAKNRFGWS 230 (245)
Q Consensus 199 ~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~ 230 (245)
.......+.|..+...+.+.|+|.|.|..|..
T Consensus 300 ~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~ 331 (444)
T 1igt_B 300 TLRVVSALPIQHQDWMSGKEFKCKVNNKDLPA 331 (444)
T ss_dssp SEEEEEEEECCHHHHHTTCEEEEEEECTTCSS
T ss_pred cEEEEEEEEEcHHHhccCCcEEEEEEcCCCCC
Confidence 00123467888777676777777799998876
No 86
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.84 E-value=1.2e-19 Score=139.96 Aligned_cols=127 Identities=21% Similarity=0.296 Sum_probs=112.6
Q ss_pred ecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCE
Q psy12131 9 NRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGT 88 (245)
Q Consensus 9 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~ 88 (245)
....|.|.+++.+|+|.|+|.|.|..|. ....+.|.|..+|.+...+....+..|+.+.|.|.+.|.|.|.+.|++++.
T Consensus 255 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~ 333 (382)
T 1cs6_A 255 SEPLLHIQNVDFEDEGTYECEAENIKGR-DTYQGRIIIHAQPDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQ 333 (382)
T ss_dssp SSSEEEECSCCGGGCEEEEEEEEETTEE-EEEEEEEEEEEEEEEEECCCCEEEETTCCEEEECEEEEESCCEEEEEETTE
T ss_pred CCcEEEEccCChhhCEEEEEEEEcCCCe-EEEEEEEEEecCCCcccCCCccEEcCCCeEEEEEEeeeecCCEEEEEECCE
Confidence 4567999999999999999999999887 688889999999998887777788899999999999999999999999999
Q ss_pred EeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEec
Q psy12131 89 AITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGI 140 (245)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~ 140 (245)
.+....++.+. ...|.|.++..+|.|.|+|.|.|..|.....+.|.+.
T Consensus 334 ~~~~~~~~~~~----~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 381 (382)
T 1cs6_A 334 PLASQNRIEVS----GGELRFSKLVLEDSGMYQCVAENKHGTVYASAELTVQ 381 (382)
T ss_dssp ECCCCSSEEEE----TTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred ECCCCceEEEE----CCEEEECcCCcccCEEEEEEEEeCCCeEEEEEEEEEe
Confidence 98877666553 2379999999999999999999999998888877753
No 87
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.84 E-value=4e-20 Score=140.75 Aligned_cols=124 Identities=16% Similarity=0.229 Sum_probs=89.0
Q ss_pred cceEEEee----cceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEe----cCCeEEeecceEEecCCCeEEEEEEE
Q psy12131 2 KEIELLYN----RESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVI----YPPEVSVEKQWIHTAPDMRAEIICNV 73 (245)
Q Consensus 2 ~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~ 73 (245)
+|+.+..+ ..+|.|.+++.+|+|.|+|.+.+..+. ....+.|.|. .+|.+...+....+..|+.+.|.|.+
T Consensus 66 ~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~-~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~ 144 (344)
T 1za6_B 66 GKATLTADTSASTAYVELSSLRSEDTAVYFCTRSLNMAY-WGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLV 144 (344)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTTTCE-ECCCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEE
T ss_pred CcEEEEEecCCCEEEEEECCCCcccCEEEEEEEecCcce-ecCcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEE
Confidence 46776653 347999999999999999999985433 3445677877 34555544333445789999999999
Q ss_pred eec-CC-CeEEEEECCEEecc---------CCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeE
Q psy12131 74 YAN-PP-AKVEWFRDGTAITL---------GGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQ 132 (245)
Q Consensus 74 ~~~-~~-~~~~w~~~~~~~~~---------~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~ 132 (245)
.|. |. +.+.|++++..+.. +..+.. .+.|.|..+..+| |.|+|.+.|..+...
T Consensus 145 ~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~-----~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~ 208 (344)
T 1za6_B 145 KDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSL-----SSVVTVPSSSLGT-QTYICNVNHKPSNTK 208 (344)
T ss_dssp EEEBSSCCCEEETTTTBCTTEEECCCEECTTSCEEE-----EEEEEEETTHHHH-BCEEEEEEEGGGTEE
T ss_pred eeEECCCeEEEEecCCccCceeECCCeECCCCCEEE-----EEEEEEcHHHcCC-CcEEEEEEeCCCCcc
Confidence 986 54 69999998865311 111111 2468888888777 999999999887543
No 88
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.83 E-value=3.3e-19 Score=134.02 Aligned_cols=137 Identities=15% Similarity=0.227 Sum_probs=110.2
Q ss_pred ceEEEeec--ceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEec--------------------CCeEEee-cceE
Q psy12131 3 EIELLYNR--ESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIY--------------------PPEVSVE-KQWI 59 (245)
Q Consensus 3 ~~~~~~~~--~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~--------------------~p~~~~~-~~~~ 59 (245)
++.+...+ ..|.|.+++.+|+|.|+|.|.|..|. ....+.|.|.. +|.+... +...
T Consensus 154 ~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 232 (317)
T 2y25_A 154 RVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTG-HQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVV 232 (317)
T ss_dssp SEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCE-EEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSEE
T ss_pred CeEEeccCCEEEEEECcCCcccCeeEEEEEEeCCce-EEEEEEEeeeeccccchhhcccCCcccCcCCCCcccccCCccE
Confidence 34444333 34999999999999999999998776 56666666531 3444333 4556
Q ss_pred EecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEec-CceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEE
Q psy12131 60 HTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVS-SEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLS 138 (245)
Q Consensus 60 ~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~ 138 (245)
.+..|+.+.|.|.+.|.|.|.+.|++++..+....++.+... +....|.|.++..+|.|.|+|.|.|..|.....+.|.
T Consensus 233 ~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~ 312 (317)
T 2y25_A 233 TIQEGKALNLTCNVWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVS 312 (317)
T ss_dssp EEETTSBBCEEEEEECSSCCEEEEEESSSEECCCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTEEEEEEEEEE
T ss_pred EEEcCCEEEEEEEEecCCCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCCeEEEEEEEE
Confidence 788999999999999999999999999999887777776554 5567999999999999999999999999988888877
Q ss_pred ec
Q psy12131 139 GI 140 (245)
Q Consensus 139 ~~ 140 (245)
+.
T Consensus 313 V~ 314 (317)
T 2y25_A 313 VF 314 (317)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 89
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.83 E-value=2.1e-19 Score=133.55 Aligned_cols=139 Identities=22% Similarity=0.411 Sum_probs=110.3
Q ss_pred ceEEEeecceEEEeccCCCCCEEEEEEEEcCCCCc-eeeEEEEEEecCCeEEeecc--eEEecCCCeEEEEEEEeecCCC
Q psy12131 3 EIELLYNRESLDLDRVTLKLAGLYQCIASNNIGES-TSKNFIVNVIYPPEVSVEKQ--WIHTAPDMRAEIICNVYANPPA 79 (245)
Q Consensus 3 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~~l~v~~~p~~~~~~~--~~~~~~g~~~~l~C~~~~~~~~ 79 (245)
++.+.. +..|.|.+++.+|+|.|+|.+.+..+.. ....+.+.|..+|.+...+. ...+..|+.+.|.|.+.|.|.|
T Consensus 146 ~~~~~~-~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p 224 (291)
T 2wim_A 146 RFAMLA-NNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEP 224 (291)
T ss_dssp SEEECT-TSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCCCBSCC
T ss_pred eEEEcc-CCCEEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEeccCCccccCcccccceecCCCeEEEEEEeecCCCC
Confidence 344443 3459999999999999999999887542 45677888888888766543 3456789999999999999999
Q ss_pred eEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEecCCCC
Q psy12131 80 KVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIPNIP 144 (245)
Q Consensus 80 ~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~~~p 144 (245)
.+.|++++..+....++.+. .....|.|.++..+|.|.|+|.|.|..|.....+.|.+...++
T Consensus 225 ~v~W~~~g~~~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~~~ 287 (291)
T 2wim_A 225 AISWFRNGKLIEENEKYILK--GSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQHH 287 (291)
T ss_dssp EEEEEETTEECCCTTTEEEC--STTCEEEEESCCSTTCEEEEEEEEETTEEEEEEEEEEC-----
T ss_pred eEEEEECCEECcCCccEEEc--CCccEEEEeeCCcccCEEEEEEEEECCCceeeeEEEEEEEecc
Confidence 99999999998877666543 2346899999999999999999999999999999888765444
No 90
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.83 E-value=4.9e-19 Score=131.41 Aligned_cols=141 Identities=19% Similarity=0.231 Sum_probs=109.2
Q ss_pred ceEEEeecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEe----cCCeEEeecceEEecCCCeEEEEEEEee-cC
Q psy12131 3 EIELLYNRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVI----YPPEVSVEKQWIHTAPDMRAEIICNVYA-NP 77 (245)
Q Consensus 3 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~~ 77 (245)
++.+.. +..|.|.+++.+|+|.|+|.+.+......+..+.|.|. .+|.+...+....+..|+.+.|.|.+.+ .|
T Consensus 137 ~~~~~~-~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p 215 (289)
T 3ejj_X 137 VYFFSP-WRGFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEV 215 (289)
T ss_dssp CEEEET-TTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEESSCCCCCEEEEESSSEECCSSSCEEEEEEEEESSS
T ss_pred cEEECC-CCCEEEeecccccCEEEEEEEEeCCCccccccEEEEEEECCCCCCeEEecCCceEEEeCCcEEEEEEeCCCCC
Confidence 444443 45699999999999999999995433336778888888 6788888887777789999999999998 78
Q ss_pred CCeEEEEECCEEeccCCcEEEEe--cCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEecCCCC
Q psy12131 78 PAKVEWFRDGTAITLGGRIDMHV--SSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIPNIP 144 (245)
Q Consensus 78 ~~~~~w~~~~~~~~~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~~~p 144 (245)
.+.+.|++++..+.......... ....+.|.|.++..+|.|.|+|.|.|..|.....+.|.+.+.+.
T Consensus 216 ~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~L~~~~~~~ 284 (289)
T 3ejj_X 216 GFNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVVESHH 284 (289)
T ss_dssp CCEEEEEETTEECCCCEEEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEEECC----
T ss_pred ceEEEEEECCEEeeccCCcccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCccccEEEEEEeccc
Confidence 89999999998776532221110 01246899999999999999999999999999999988765543
No 91
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.83 E-value=7.8e-19 Score=123.04 Aligned_cols=181 Identities=17% Similarity=0.223 Sum_probs=126.3
Q ss_pred cCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccC-CcEEEE-ecCceeEEEEccCCCCCCeEEEEEEE
Q psy12131 48 YPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLG-GRIDMH-VSSEKHSLLVRHIKDTDFGNYMCQAS 125 (245)
Q Consensus 48 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~-~~~~~~-~~~~~~~l~i~~~~~~d~g~y~C~~~ 125 (245)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... .++.+. ..+....|.|.++...|.|.|+|.+.
T Consensus 3 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 82 (197)
T 2j8h_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRAT 82 (197)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEE
T ss_pred CCCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEE
Confidence 3677877777888999999999999999999999999999887654 344443 24455689999999999999999999
Q ss_pred eCCceeEEEEEEEecCCC----Ccc-c--cCccccCCCeeEEEEEeCCCCCceEEEEEEEeec--CCCCeEEEeeCCCCC
Q psy12131 126 NNLGSSQQFIQLSGIPNI----PVF-Q--KSSRRLGPDGYRLVWQVDTYSGIIQYLLKFRERE--ELTPWRNIVIPSDGS 196 (245)
Q Consensus 126 n~~g~~~~~~~~~~~~~~----p~~-~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 196 (245)
|..|.....+.+.+...| |.. . .......+..+.|.|.+.+.++. . ..|+++.. .......+....
T Consensus 83 n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p-~-i~W~~~~~~~~~~~~~~~~~~~--- 157 (197)
T 2j8h_A 83 NQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDP-V-ITWQKGQDLIDNNGHYQVIVTR--- 157 (197)
T ss_dssp ETTEEEEEEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCC-E-EEEEESSCEECSSSSCEEEECS---
T ss_pred ECCCceeEEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCC-c-EEEEECCEEeecCCCEEEEEcC---
Confidence 998887776666553221 111 1 11234568899999999765433 2 23444432 111111111111
Q ss_pred CCcceeeeEEEecC-CCCCceEEEEEEEEecCCCCCCCcceEE
Q psy12131 197 LAGPIYTQSYNITG-LQLFTQYEASVLAKNRFGWSRPSKAYVF 238 (245)
Q Consensus 197 ~~~~~~~~~~~i~~-l~~~~~y~~~v~a~N~~G~~~~s~~~~~ 238 (245)
....+.|.+ +...+.+.|+|.|.|..|....+..+.|
T Consensus 158 -----~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V 195 (197)
T 2j8h_A 158 -----SFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDV 195 (197)
T ss_dssp -----SEEEEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred -----CceEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEE
Confidence 125788888 9999999999999999998655555554
No 92
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.83 E-value=2.6e-22 Score=167.88 Aligned_cols=219 Identities=14% Similarity=0.241 Sum_probs=0.0
Q ss_pred ceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEe
Q psy12131 11 ESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAI 90 (245)
Q Consensus 11 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~ 90 (245)
+.|.|.++ +|+|.|+|.|.|..|. ....+.|.|..+|.+...+. ..+.+|+.+.|.|.+.+.|.+.+.|++++..+
T Consensus 515 ~~L~i~~~--~d~G~Y~C~a~N~~g~-~~~~~~l~V~~~p~i~~~p~-~~~~~G~~v~l~C~~~~~p~~~v~W~k~~~~~ 590 (772)
T 3v2a_R 515 STLVIQAA--NVSALYKCEAVNKVGR-GERVISFHVTRGPEITLQPD-MQPTEQESVSLWCTADRSTFENLTWYKLGPQP 590 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEeec--ccCeEEEEEEEccccc-cceeEEEEEECCceeeccCC-cccccCCceEEEEeccCCCCCCcEEEEcCCcc
Confidence 45888877 7999999999999887 57778888988888766654 34678999999999999999999999987654
Q ss_pred ccCCcEEE--------------------EecCceeEEEEccCCCCCCeEEEEEEEeCCceeE--EEEEEEec-CCCCccc
Q psy12131 91 TLGGRIDM--------------------HVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQ--QFIQLSGI-PNIPVFQ 147 (245)
Q Consensus 91 ~~~~~~~~--------------------~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~--~~~~~~~~-~~~p~~~ 147 (245)
........ ........|.|.++..+|.|.|.|.|.|..+... ....+.+. ..+|.+.
T Consensus 591 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~s~~~~l~v~~~~~P~~~ 670 (772)
T 3v2a_R 591 LPIHVGELPTPVCKNLDTLWKLNATMFSNSTNDILIMELKNASLQDQGDYVCLAQDRKTKKRHCVVRQLTVLERVAPTIT 670 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccCcccccccccccceeeccceeeecCCCceEEEEECCCCccCCcEEEEEEEeCCCCeEEEEEEeecccccCCCEee
Confidence 33211110 1111234599999999999999999999654332 22233321 2344433
Q ss_pred cC---ccccCCCeeEEEEEeCCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEE
Q psy12131 148 KS---SRRLGPDGYRLVWQVDTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAK 224 (245)
Q Consensus 148 ~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~ 224 (245)
.. .....++.+.|.|.+.+.++. .+ .|+++...-..-..+..... ...+.|.++...+.+.|+|.|.
T Consensus 671 ~~~~~~~v~~g~~~~l~C~~~g~P~p-~v-~W~k~g~~l~~~~~~~~~~~--------~~~L~I~~v~~~D~G~Y~C~a~ 740 (772)
T 3v2a_R 671 GNLENQTTSIGESIEVSCTASGNPPP-QI-MWFKDNETLVEDSGIVLKDG--------NRNLTIRRVRKEDEGLYTCQAC 740 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCceEEeCCCCEEEEEEeCccCCC-eE-EEEECCeECcCCCCeEEcCC--------CcEEEECcCCHHHCEEEEEEEE
Confidence 22 234668899999999776443 22 34554330000001111111 1568888999999999999999
Q ss_pred ecCCCCCCCcceEEecCCC
Q psy12131 225 NRFGWSRPSKAYVFATEGA 243 (245)
Q Consensus 225 N~~G~~~~s~~~~~~t~~~ 243 (245)
|.+|....+..+.|...|+
T Consensus 741 N~~G~~~~~~~l~V~~~p~ 759 (772)
T 3v2a_R 741 SVLGCAKVEAFFIIEGAQE 759 (772)
T ss_dssp -------------------
T ss_pred eCCcceeEEEEEEEECCCC
Confidence 9999999888888877665
No 93
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.83 E-value=2.5e-19 Score=133.07 Aligned_cols=129 Identities=21% Similarity=0.363 Sum_probs=105.5
Q ss_pred cceEEEeccCCCCCEEEEEEEEcCCCC-ceeeEEEEEEecCCeEEeecc--eEEecCCCeEEEEEEEeecCCCeEEEEEC
Q psy12131 10 RESLDLDRVTLKLAGLYQCIASNNIGE-STSKNFIVNVIYPPEVSVEKQ--WIHTAPDMRAEIICNVYANPPAKVEWFRD 86 (245)
Q Consensus 10 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~~l~v~~~p~~~~~~~--~~~~~~g~~~~l~C~~~~~~~~~~~w~~~ 86 (245)
+..|.|.+++.+|+|.|+|.+.|..+. .....+.|.|..+|.+...+. ...+..|+.+.|.|.+.|.|.|.+.|+++
T Consensus 154 ~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~ 233 (291)
T 1qz1_A 154 NNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKD 233 (291)
T ss_dssp TSCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEEEEESCSEEEEETTSCCCEEEEEEEEEESCCEEEEEET
T ss_pred CCcEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEecCCcccccccccccccccCceEEEEEEEEEeCCCcEEEEEC
Confidence 446999999999999999999987533 345678888888888776543 45678899999999999999999999999
Q ss_pred CEEeccCC----cEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEec
Q psy12131 87 GTAITLGG----RIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGI 140 (245)
Q Consensus 87 ~~~~~~~~----~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~ 140 (245)
+..+.... ++.. ....+.|.|.++..+|.|.|+|.|.|..|.....+.|.+.
T Consensus 234 g~~~~~~~~~~~~~~~--~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 289 (291)
T 1qz1_A 234 GEPIENEEEDDEKHIF--SDDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVF 289 (291)
T ss_dssp TEECCCC--CCSSEEE--CTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CEECcCCCCCCcceEE--cCCCcEEEEEecChhcCEEEEEEEEeCCCceEEEEEEEEE
Confidence 99887653 3322 2345689999999999999999999999998888887764
No 94
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.83 E-value=1.5e-19 Score=128.44 Aligned_cols=134 Identities=16% Similarity=0.152 Sum_probs=94.6
Q ss_pred cceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEec--CCeEEeec-ceEEecCCCeEEEEEEEeecCC--CeEEEE
Q psy12131 10 RESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIY--PPEVSVEK-QWIHTAPDMRAEIICNVYANPP--AKVEWF 84 (245)
Q Consensus 10 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~--~p~~~~~~-~~~~~~~g~~~~l~C~~~~~~~--~~~~w~ 84 (245)
...|.|.+++.+|+|.|+|.|.+..+...+..+.|.|.. +|.+...+ ..+.+.+|+.+.|.|.+.|.|. +.+.|+
T Consensus 63 ~~~l~I~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~ 142 (213)
T 2x1w_L 63 KKGFTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWE 142 (213)
T ss_dssp TTEEEEEGGGTTTCSEEEEEEC----CEECCCEEEEECBCCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEE
T ss_pred CccEEEccCChhcCceEEEEEEECCeeEEEEEEEEEEeCCcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEE
Confidence 456999999999999999999986444344457777754 34444443 3447889999999999998654 479999
Q ss_pred ECCEEeccCCc-EEEEe-------cCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEecCCC
Q psy12131 85 RDGTAITLGGR-IDMHV-------SSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIPNI 143 (245)
Q Consensus 85 ~~~~~~~~~~~-~~~~~-------~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~~~ 143 (245)
+++..+..... ..... ....+.|.|.++..+|.|.|.|.|.|..|.....+.|.+...|
T Consensus 143 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p 209 (213)
T 2x1w_L 143 YPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEDP 209 (213)
T ss_dssp CSCSSCCSEEEEEEEECCCSSCSCEEEEEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC--
T ss_pred ecCCccceEEEeccccccccCccceeeeEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEeccc
Confidence 98765322111 00000 1124579999999999999999999999998888888876433
No 95
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.83 E-value=1.7e-19 Score=134.03 Aligned_cols=138 Identities=16% Similarity=0.187 Sum_probs=106.2
Q ss_pred ceEEEeecceEEEeccCCCCCE-EEEEEEEcCCCCceeeEEEEEEe----cCCeEEeecceEEecCCCeEEEEEEEeecC
Q psy12131 3 EIELLYNRESLDLDRVTLKLAG-LYQCIASNNIGESTSKNFIVNVI----YPPEVSVEKQWIHTAPDMRAEIICNVYANP 77 (245)
Q Consensus 3 ~~~~~~~~~~L~i~~~~~~d~G-~Y~C~~~~~~~~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~ 77 (245)
++.+..+ ..|.|.+++.+|+| .|+|.|.|..+...+..+.|.|. .+|.+...+....+..|+.+.|.|.+.+.|
T Consensus 138 ~~~~~~~-~~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p 216 (290)
T 2o26_X 138 TFVPNPK-AGITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTIKDVS 216 (290)
T ss_dssp EEEEETT-TEEEEESCCGGGTTCEEEEEEEETTEEEECCCEEEEEECCCCSCCEEECSCSBCCCCTTCCEEEEEEEEESS
T ss_pred ceeeCCC-CCEEEecccHHHCCCEEEEEEEECCceEEeEEEEEEEEeCCCCCCccccCCCcceEecCCcEEEEEEEecCC
Confidence 3344433 46999999999999 99999999855434556788877 688887776666888999999999999999
Q ss_pred CCe-EEEEECCEEe----ccCCcEEEE---ecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEecC
Q psy12131 78 PAK-VEWFRDGTAI----TLGGRIDMH---VSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIP 141 (245)
Q Consensus 78 ~~~-~~w~~~~~~~----~~~~~~~~~---~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~ 141 (245)
.|. +.|++++..+ ......... .....+.|.|.++...|.|.|.|.|.|..|.....+.|.+..
T Consensus 217 ~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 288 (290)
T 2o26_X 217 TSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVTTTLKVVE 288 (290)
T ss_dssp TTCEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEECC--
T ss_pred cceeEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcEEEEEEEEEEe
Confidence 996 9999988663 222222221 112356899999999999999999999999998888877653
No 96
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.82 E-value=7.4e-20 Score=125.98 Aligned_cols=120 Identities=13% Similarity=0.183 Sum_probs=91.8
Q ss_pred cceEEEeecceEEEeccCCCCCEEEEEEEEcCCCCc-eeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCCCe
Q psy12131 2 KEIELLYNRESLDLDRVTLKLAGLYQCIASNNIGES-TSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPPAK 80 (245)
Q Consensus 2 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~ 80 (245)
+|+.+..+++ |.|.+++.+|+|.|+|.+.|..|.. .+..+.|.|..++.. + .+ ...+..+.|.|.+.+.|.|.
T Consensus 53 ~r~~~~~~gs-L~I~~v~~~D~G~Y~C~~~n~~g~~~~~~~~~l~V~~~~~~---p-~i-~~~~~~v~L~C~~~g~p~p~ 126 (176)
T 1hng_A 53 GAFEILANGD-LKIKNLTRDDSGTYNVTVYSTNGTRILNKALDLRILEMVSK---P-MI-YWECSNATLTCEVLEGTDVE 126 (176)
T ss_dssp TTEEECTTSC-EEESSCCGGGCEEEEEEEEETTCCEEEEEEEEEEEECCCCC---C-EE-EEETTTTEEEEECSSCSSCE
T ss_pred CeEEECCCCc-EEEcccccccCEEEEEEEEeCCCCEEEEEEEEEEEeCCCCC---C-EE-EecCCcEEEEEEecCCCCcE
Confidence 4667755554 9999999999999999999998874 467788888764321 1 11 12244589999999999999
Q ss_pred EEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEE
Q psy12131 81 VEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLS 138 (245)
Q Consensus 81 ~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~ 138 (245)
+.|++++..+....+ +.|..+..+|.|.|+|.|.|..|.......+.
T Consensus 127 i~W~~~g~~l~~~~~-----------~~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~ 173 (176)
T 1hng_A 127 LKLYQGKEHLRSLRQ-----------KTMSYQWTNLRAPFKCKAVNRVSQESEMEVVN 173 (176)
T ss_dssp EEEEETTEEEEEESS-----------SEEEEECSCCSSCEEEEEEETTEEEEEEECCC
T ss_pred EEEEECCEECCCCCc-----------EEEEEEEccCCeEEEEEEEecCCCceeccccc
Confidence 999999988765432 33446778999999999999999887766554
No 97
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.82 E-value=3.2e-19 Score=125.31 Aligned_cols=133 Identities=20% Similarity=0.247 Sum_probs=102.1
Q ss_pred eEEEeecceEEEeccCCCCCEEEEEEEEcCCCCce--eeEEEEEEe-------cCCeEEeecceEEecCCCeEEEEEEEe
Q psy12131 4 IELLYNRESLDLDRVTLKLAGLYQCIASNNIGEST--SKNFIVNVI-------YPPEVSVEKQWIHTAPDMRAEIICNVY 74 (245)
Q Consensus 4 ~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~--~~~~~l~v~-------~~p~~~~~~~~~~~~~g~~~~l~C~~~ 74 (245)
..+...+..|.|.+++.+|+|.|+|.+.+..+... ...+.+.+. .+|.+...+....+..|+.+.|.|.+.
T Consensus 59 ~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~ 138 (201)
T 3s97_C 59 RFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFAL 138 (201)
T ss_dssp EEECTTTCCEEESSCCGGGCEEEEEEEEEGGGTEEEECCCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEE
T ss_pred eEEEcCCCeEEECcCCcccCeEEEEEEEecCCCcchhhcccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEcc
Confidence 34444566799999999999999999998665422 233444443 355566555567788999999999999
Q ss_pred ecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEec
Q psy12131 75 ANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGI 140 (245)
Q Consensus 75 ~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~ 140 (245)
+.|.|.+.|++++..+.....+ .. ....|.|.++..+|.|.|+|.+.|..|.....+.|.+.
T Consensus 139 g~p~p~v~W~~~~~~~~~~~~~--~~--~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 139 GNPVPDIRWRKVLEPMPSTAEI--ST--SGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp EESCCEEEEEETTBCCCTTCEE--ET--TTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCCCceEEEeCCCcCCCceee--cC--CCCEEEEccCChhhCEEEEEEEEecCCceeeeEEEEEe
Confidence 9999999999999876644222 21 34589999999999999999999999998887777653
No 98
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.82 E-value=5.4e-19 Score=127.75 Aligned_cols=138 Identities=20% Similarity=0.391 Sum_probs=104.8
Q ss_pred EEEeecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecC----CeEEe-ecceEEecCCCeEEEEEEEeecCCC
Q psy12131 5 ELLYNRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYP----PEVSV-EKQWIHTAPDMRAEIICNVYANPPA 79 (245)
Q Consensus 5 ~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~----p~~~~-~~~~~~~~~g~~~~l~C~~~~~~~~ 79 (245)
.+..+..+|.|.+++.+|+|.|+|.+.+..+. ....+.|.|... |.+.. .+....+..|+.+.|.|.+.+.|.+
T Consensus 66 ~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~-~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p 144 (241)
T 3grw_A 66 KLRHQQWSLVMESVVPSDRGNYTCVVENKFGS-IRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQP 144 (241)
T ss_dssp EEEGGGTEEEECSCCGGGCEEEEEEEEETTEE-EEEEEEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCC
T ss_pred eeeccceEEEEEeCCcccCEEEEEEEeecCCc-eEEEEEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCC
Confidence 45556678999999999999999999998776 567788888752 33322 2455667889999999999999999
Q ss_pred eEEEEE----CCEEeccCCcEEEE--------ecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEecCCC
Q psy12131 80 KVEWFR----DGTAITLGGRIDMH--------VSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIPNI 143 (245)
Q Consensus 80 ~~~w~~----~~~~~~~~~~~~~~--------~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~~~ 143 (245)
.+.|++ ++..+......... .......|.|.++..+|.|.|+|.+.|..|.....+.|.+...|
T Consensus 145 ~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p 220 (241)
T 3grw_A 145 HIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPR 220 (241)
T ss_dssp EEEEEEECCSSSCSSCTTTCCCEEEEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC----
T ss_pred EEEEEEcccCCCcccCCCCceeeeeeeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEecCCC
Confidence 999999 77766544321111 11234679999999999999999999999999888888775433
No 99
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.82 E-value=5.5e-19 Score=126.13 Aligned_cols=131 Identities=18% Similarity=0.179 Sum_probs=93.4
Q ss_pred ceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEEC-CEE
Q psy12131 11 ESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRD-GTA 89 (245)
Q Consensus 11 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~-~~~ 89 (245)
.+|.|.+++.+|+|.|+|.+.+ .+. ....+.|.|..+|..........+..|+.+.|.|.+.|.|.|.+.|+++ +..
T Consensus 80 ~~L~I~~v~~~D~G~Y~C~~~~-~~~-~~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~ 157 (222)
T 3sbw_C 80 AALQITDVKLQDAGVYRCMISY-GGA-DYKRITVKVNAPYNKINQRILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQV 157 (222)
T ss_dssp EEEEESSCCGGGCEEEEEEEES-SSE-EEEEEEEEEEBCCCCCEEEEEEEETTTTEEEEEEEEEEBSCCEEEEEETTCCE
T ss_pred EEEEEcCcccccCeEEEEEEEe-CCC-ceeEEEEEEECCCCCCCceeeeeecCCCcEEEEEEecCCCCCeEEEEECCCce
Confidence 4699999999999999999998 444 6778889998776543333223567899999999999999999999998 555
Q ss_pred eccCCcEEEEe--cCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEecCCC
Q psy12131 90 ITLGGRIDMHV--SSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIPNI 143 (245)
Q Consensus 90 ~~~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~~~ 143 (245)
+.......... .+.-....+..+...|.|.|+|.|.|..|.....+.+.+...|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~p 213 (222)
T 3sbw_C 158 LSGKTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIPELP 213 (222)
T ss_dssp ECCEEEEEECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCCC-
T ss_pred ecCccceEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEEEEecCCc
Confidence 44322211111 1111111122345678999999999999998888888876444
No 100
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=99.82 E-value=1.2e-17 Score=125.36 Aligned_cols=226 Identities=13% Similarity=0.072 Sum_probs=131.8
Q ss_pred ceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCC-C-e--EEEEEC
Q psy12131 11 ESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPP-A-K--VEWFRD 86 (245)
Q Consensus 11 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~-~--~~w~~~ 86 (245)
+.|+|.+++..|+|.|+|.+.+..+. ..+.+.|.|..+|................+.+......... + . +.+...
T Consensus 61 ~~L~i~~~~~~d~g~y~c~~~~~~~~-~~~~~~l~v~~~P~~P~~l~c~~~~~~~~~~~~W~~~~~~~~~~~Y~l~~~~~ 139 (313)
T 2d9q_B 61 SIITLPHLNHTQAFLSCSLNWGNSLQ-ILDQVELRAGYPPAIPHNLSCLMNLTTSSLICQWEPGPETHLPTSFTLKSFKS 139 (313)
T ss_dssp EEEEESCCCSSEEEEEEEEESSSSEE-EEEEEEEEECCCCCCCEEEEEEEETTTTEEEEEEECCSCCSSCCEEEEEEEEC
T ss_pred EEEEEeccCCCccceEEeeecCCCce-eEEEEEEccCCCCCCCccceeeECCCCccEEEEecCCCCCCCceeEEEEEEec
Confidence 56999999999999999988654333 45567777777765322211111101234444333211111 1 1 222111
Q ss_pred CEEecc--CCcEEEEecCceeEEEEc--cCCCCCCeEEEEEEEeCCceeEE-EEEEE----ecCCCCccccCcccc----
Q psy12131 87 GTAITL--GGRIDMHVSSEKHSLLVR--HIKDTDFGNYMCQASNNLGSSQQ-FIQLS----GIPNIPVFQKSSRRL---- 153 (245)
Q Consensus 87 ~~~~~~--~~~~~~~~~~~~~~l~i~--~~~~~d~g~y~C~~~n~~g~~~~-~~~~~----~~~~~p~~~~~~~~~---- 153 (245)
+..... ..............+.+. .+.......+++.|.|..|.... .+.+. +.|.||.........
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~Y~f~V~A~N~~G~~~s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~ 219 (313)
T 2d9q_B 140 RGNCQTQGDSILDCVPKDGQSHCSIPRKHLLLYQNMGIWVQAENALGTSMSPQLCLDPMDVVKLEPPMLRTMDPSPEAAP 219 (313)
T ss_dssp CTTSCSCCCCEEEECCCTTCSEEEEEGGGCCSSSCEEEEEEEEETTEEEECCCEEECGGGGEECCCCEEEECCC------
T ss_pred CCCcccCCcccccCCCCCCCcEEEECccccccceeEEEEEEEECCCCCccCccEEEehhheeccCcCceeEEEEeccccc
Confidence 110000 000001001112234443 47777788888999999987532 22221 346777655443221
Q ss_pred -CCCeeEEEEEeCC--CCCceEEEEEEE-eecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCC
Q psy12131 154 -GPDGYRLVWQVDT--YSGIIQYLLKFR-EREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGW 229 (245)
Q Consensus 154 -~~~~~~l~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~ 229 (245)
....+.|+|.++. +...+.|.++|+ ... ...|..+...... ...+.+.+|.+++.|.|+|+|.|..|.
T Consensus 220 ~~~~~l~l~W~~p~~~~~~~l~Y~v~y~~~~~-~~~w~~~~~~~~~-------~~~~~l~~L~p~t~Y~~rVra~~~~g~ 291 (313)
T 2d9q_B 220 PQAGCLQLSWEPWQPGLHINQKCELRHKPQRG-EASWALVGPLPLE-------ALQYELCGLLPATAYTLQIRCIRWPLP 291 (313)
T ss_dssp -CCSCEEEEEECCGGGTTSCEEEEEEEEESSS-CCCCEEEEEECSC-------EEEEEECSCCSCCCEEEEEEEEECSSC
T ss_pred CCCCeEEEEECCCCCCCceeEEEEEEEccCCC-CCCcEEcccccCc-------ceEEEEeCCCCCCeEEEEEEeeECCCC
Confidence 4578999999843 233579999999 443 6679765432221 267999999999999999999999877
Q ss_pred C---CCCcceEEecCCCCC
Q psy12131 230 S---RPSKAYVFATEGAET 245 (245)
Q Consensus 230 ~---~~s~~~~~~t~~~~~ 245 (245)
| .+|..+.++|...+|
T Consensus 292 G~wS~wS~~~~~~T~~~~P 310 (313)
T 2d9q_B 292 GHWSDWSPSLELRTTERAA 310 (313)
T ss_dssp CCCCCCCCCEEECCCC---
T ss_pred CccCCCCCccceeCCccCC
Confidence 6 477889999988654
No 101
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.82 E-value=8.9e-20 Score=143.15 Aligned_cols=214 Identities=13% Similarity=0.110 Sum_probs=126.8
Q ss_pred ceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecC--CCeEEEEEC--
Q psy12131 11 ESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANP--PAKVEWFRD-- 86 (245)
Q Consensus 11 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~--~~~~~w~~~-- 86 (245)
+.|.|.+++.+|+|.|+|.|.|..+. ......+.+..++.....+....+.+|+.+.|.|.+.|.| .+.+.|+++
T Consensus 181 ~~L~i~~~~~~d~G~Y~C~a~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~ 259 (438)
T 1qgc_4 181 STLTLTKDEYERHNSYTCEATHKTST-SPIVKSFNRNECEVMLVESGGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTP 259 (438)
T ss_dssp EEEEEEHHHHHTCCEEEEEEEETTCS-SCEEEEEETTC-CCEEEEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEEET
T ss_pred EEEEEeCcccCCCCeEEEEEEecccC-CceecccccccceeEEecCCceEEecCCcEEEEEEEcccccCCcEEEEEECCC
Confidence 46999999999999999999998766 2233333222222223344556788999999999999988 579999985
Q ss_pred CEEec-----------------cCCcEEEEec--CceeEEEEccCCCCCCeEEEEEEEeCCc-----ee--EEEEEEEec
Q psy12131 87 GTAIT-----------------LGGRIDMHVS--SEKHSLLVRHIKDTDFGNYMCQASNNLG-----SS--QQFIQLSGI 140 (245)
Q Consensus 87 ~~~~~-----------------~~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~~~n~~g-----~~--~~~~~~~~~ 140 (245)
+..+. ...++.+... .....|.|.++..+|.|.|.|.+.|..+ .. ...+.+...
T Consensus 260 g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~ 339 (438)
T 1qgc_4 260 EKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVSAA 339 (438)
T ss_dssp TTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGGCCEEEEEECCSSSCCCCCSBCCCEEEEECSS
T ss_pred CCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCCChhhCEEEEEEEEccCCCccceeeCCCEEEEEecC
Confidence 43221 1245554432 3356899999999999999999998443 11 223333322
Q ss_pred C-CCCcccc---CccccCCCeeEEEEEeCCC-CCceEEEEEEEeecCCCCeEEEeeCCCCCCCcce-eeeEEEecCCCCC
Q psy12131 141 P-NIPVFQK---SSRRLGPDGYRLVWQVDTY-SGIIQYLLKFREREELTPWRNIVIPSDGSLAGPI-YTQSYNITGLQLF 214 (245)
Q Consensus 141 ~-~~p~~~~---~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~l~~~ 214 (245)
+ .+|.+.. ......++.+.|.|.+.+. +....+. |+++.. ...-. ...... ..+.. ....+.|......
T Consensus 340 ~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~-W~~~g~-~~~~~--~~~~~~-~~g~~~~~s~L~i~~~~~~ 414 (438)
T 1qgc_4 340 KTTPPSVYPLAPGSAAAAASMVTLGCLVKGYFPEPVTVT-WNSGSL-SSGVH--TFPAVL-QSDLYTLSSSVTVPSSTWP 414 (438)
T ss_dssp CCBCCEEEEECCCGGGCCSSEEEEEEEEESCBSSCCEEE-EGGGTC-CSSEE--ECCCEE-ETTEEEEEEEEEEEEEHHH
T ss_pred CCCCCeEEEcCcccccccCCcEEEEEEeccccCCCcEEE-EecCCC-CCcee--ecCccc-cCCcEEEEEEEEEehhhcC
Confidence 2 2332211 1234578999999999765 3222332 444322 11100 000000 00111 1124666666533
Q ss_pred ceEEEEEEEEecCCCCC
Q psy12131 215 TQYEASVLAKNRFGWSR 231 (245)
Q Consensus 215 ~~y~~~v~a~N~~G~~~ 231 (245)
+ +.|+|.|.|..|...
T Consensus 415 d-g~Y~C~a~n~~g~~~ 430 (438)
T 1qgc_4 415 S-ETVTCNVAHPASSTK 430 (438)
T ss_dssp H-SCCEEEEEEGGGTEE
T ss_pred C-ceEEEEEEeCCCCcc
Confidence 3 555666999998643
No 102
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.82 E-value=8.1e-18 Score=117.22 Aligned_cols=175 Identities=13% Similarity=0.133 Sum_probs=120.0
Q ss_pred cCCeEEeecceEEecC-CCeEEEEEEEeecCC--CeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEE
Q psy12131 48 YPPEVSVEKQWIHTAP-DMRAEIICNVYANPP--AKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQA 124 (245)
Q Consensus 48 ~~p~~~~~~~~~~~~~-g~~~~l~C~~~~~~~--~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 124 (245)
.+|.+...+. ..+.+ |+.+.|.|.+.+.+. +.+.|++++..+....... ....|.|.++..+|.|.|.|.+
T Consensus 2 ~~P~i~~~~~-~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~~ 75 (190)
T 2wv3_A 2 NEPRIVTSEE-VIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNA-----SNMEYRINKPRAEDSGEYHCVY 75 (190)
T ss_dssp -CCEEEECCC-EECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCC-----SEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCcccccce-EEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccceEe-----ccEEEEEecCCcccCEEEEEEE
Confidence 4677766554 44455 999999999999887 7899999999887654321 4568999999999999999999
Q ss_pred EeCCceeEEEEEEEecCCCCcccc--CccccCCCeeEEEEEeCCCCCceEEEEEEEeec-------CCCCeEEEeeCCCC
Q psy12131 125 SNNLGSSQQFIQLSGIPNIPVFQK--SSRRLGPDGYRLVWQVDTYSGIIQYLLKFRERE-------ELTPWRNIVIPSDG 195 (245)
Q Consensus 125 ~n~~g~~~~~~~~~~~~~~p~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 195 (245)
.|. +.....+.+.+...|..... ......+..+.|.|.+.+.++. .+ .|++... .......+....
T Consensus 76 ~n~-~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p-~i-~W~~~~~g~~~~~~~~~~~~~~~~~~-- 150 (190)
T 2wv3_A 76 HFV-SAPKANATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYPHP-EW-MWRKKENGVFEEISNSSGRFFIINKE-- 150 (190)
T ss_dssp EET-TEEEEEEEEEEECCCEEEEECSEEEEETTSCEEEEEEEECSSCC-EE-EEEEEETTEEEECCCTTSCEEEEECS--
T ss_pred EeC-CcccccEEEEEecCCcccccCCcceeeCCCcEEEEEEeCccCCC-ce-EEEEcCCCceeeeecCCCeEEEecCC--
Confidence 999 77777777776543322211 1235678899999999766443 33 3444321 001111111100
Q ss_pred CCCcceeeeEEEecCCC-CCceEEEEEEEEecCCCCCCCcceEEe
Q psy12131 196 SLAGPIYTQSYNITGLQ-LFTQYEASVLAKNRFGWSRPSKAYVFA 239 (245)
Q Consensus 196 ~~~~~~~~~~~~i~~l~-~~~~y~~~v~a~N~~G~~~~s~~~~~~ 239 (245)
....+.|.++. ..+.+.|+|.|.|..|....+..+.++
T Consensus 151 ------~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 151 ------NYTELNIVNLQITEDPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp ------SEEEEEECSCCTTTSCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred ------CeeEEEEEeccccCCCEEEEEEEEecCCcceeEEEEEEE
Confidence 12468899998 788999999999999987666555553
No 103
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=99.82 E-value=4.8e-17 Score=121.61 Aligned_cols=209 Identities=17% Similarity=0.171 Sum_probs=134.2
Q ss_pred ceEEEeccCCCCCEEEEEEEEcCCCCce--eeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCE
Q psy12131 11 ESLDLDRVTLKLAGLYQCIASNNIGEST--SKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGT 88 (245)
Q Consensus 11 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~--~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~ 88 (245)
+.|.|.+++..| |.|+|.|.+. |... ...+.|.+..+|. ....|.|...+.....+.|.....
T Consensus 65 ~~L~i~~~~~~~-g~Y~C~a~~~-g~~~~~~~~~~l~v~~~P~-------------~P~~l~~~~~~~~~v~l~W~~~~~ 129 (303)
T 1i1r_A 65 SSVTFTDIASLN-IQLTCNILTF-GQLEQNVYGITIISGLPPE-------------KPKNLSCIVNEGKKMRCEWDGGRE 129 (303)
T ss_dssp EEEEECSCCCSE-EEEEEEEEET-TTEEEEEEEEEEEEECCCC-------------CCEEEEEEEETTSCCEEEEECCSC
T ss_pred EEEEEcCcCCCc-eEEEEecccC-CCcceEEEEEEEeccCCCC-------------CCeeeEEEECCCCcEEEEccCCCC
Confidence 469999999985 9999999874 4321 2334455555543 223344554433344555543211
Q ss_pred EeccCCcEEEE-------------ecCceeEEEEccC-CCCCCeEEEEEEEeCCceeEE-EEEEE----ecCCCCccccC
Q psy12131 89 AITLGGRIDMH-------------VSSEKHSLLVRHI-KDTDFGNYMCQASNNLGSSQQ-FIQLS----GIPNIPVFQKS 149 (245)
Q Consensus 89 ~~~~~~~~~~~-------------~~~~~~~l~i~~~-~~~d~g~y~C~~~n~~g~~~~-~~~~~----~~~~~p~~~~~ 149 (245)
.-. ...+.+. .......+.|..+ .+.....+++.|.|..|.... .+.+. ..|.||.....
T Consensus 130 ~~~-~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~~p~t~Y~f~V~A~N~~G~~~s~~~~~~~~~~~~p~pP~~~~v 208 (303)
T 1i1r_A 130 THL-ETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSV 208 (303)
T ss_dssp CSS-CCEEEEEEEETTEECCCEECCSSCTTEEECSSCCCTTSCEEEEEEEEETTEEEECCCEEECGGGGEECCCCEEEEE
T ss_pred CCC-CcCEEEEEEecCCCCccCCCcCCCceEEEECCcCcccccEEEEEEEEcCCCCcccCCEEECHHHeEecCCCcceEE
Confidence 100 0112211 1122346788888 777788899999999987643 22221 35667765543
Q ss_pred cc-ccCCCeeEEEEEeC--CCCCceEEEEEEEeecCCCCeEEEeeC--CCCCCCcceeeeEEEecCCCCCceEEEEEEEE
Q psy12131 150 SR-RLGPDGYRLVWQVD--TYSGIIQYLLKFREREELTPWRNIVIP--SDGSLAGPIYTQSYNITGLQLFTQYEASVLAK 224 (245)
Q Consensus 150 ~~-~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~ 224 (245)
.. .....++.|+|.++ .++++.+|.|+|+... ...|..+... ... ...+.+.+|.+++.|.|+|+|.
T Consensus 209 ~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~-~~~w~~~~~~~~~~~-------~~~~~l~~L~p~t~Y~~rV~A~ 280 (303)
T 1i1r_A 209 INSEELSSILKLTWTNPSIKSVIILKYNIQYRTKD-ASTWSQIPPEDTAST-------RSSFTVQDLKPFTEYVFRIRCM 280 (303)
T ss_dssp ECCSSSSSCEEEEEECCGGGGTSCEEEEEEEEETT-CSSCEECCGGGGCSC-------CSEEEECSCCTTCEEEEEEEEE
T ss_pred EEecCCCCEEEEEECCCCCCCcccEEEEEEEEeCC-CCCceEEccccCCCc-------eeEEEeCCCCCCCEEEEEEEec
Confidence 21 13567999999983 3467899999999875 6678765431 111 2679999999999999999999
Q ss_pred ecCCCCCC---CcceEEecCCC
Q psy12131 225 NRFGWSRP---SKAYVFATEGA 243 (245)
Q Consensus 225 N~~G~~~~---s~~~~~~t~~~ 243 (245)
|..|.|.+ |..+.++|.++
T Consensus 281 n~~G~G~~S~wS~~~~~~T~e~ 302 (303)
T 1i1r_A 281 KEDGKGYWSDWSEEASGITYED 302 (303)
T ss_dssp ETTSCSCCCCCCCCEEEECCCC
T ss_pred cCCCCCCcCCCCCccceeCCcC
Confidence 99997665 56788888764
No 104
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.82 E-value=8e-19 Score=125.05 Aligned_cols=122 Identities=21% Similarity=0.305 Sum_probs=101.6
Q ss_pred cceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecC---------------CeEEeecceEEecCCCeEEEEEEEe
Q psy12131 10 RESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYP---------------PEVSVEKQWIHTAPDMRAEIICNVY 74 (245)
Q Consensus 10 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~---------------p~~~~~~~~~~~~~g~~~~l~C~~~ 74 (245)
+..|.|.+++.+|+|.|+|.+.+..+...+..+.|.|... |.+...+....+..|+.+.|.|.+.
T Consensus 64 ~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~ 143 (218)
T 3k0w_A 64 TSELIFNAVHVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAV 143 (218)
T ss_dssp SSEEEETTCCGGGCEEEEEEEECTTCCEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEE
T ss_pred CCEEEEccCChhhCeEeEEEEEcCCCCceeeEEEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEec
Confidence 4579999999999999999999987764567788888765 5666667777888999999999999
Q ss_pred ecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCce-eEEEEEEEec
Q psy12131 75 ANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGS-SQQFIQLSGI 140 (245)
Q Consensus 75 ~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~-~~~~~~~~~~ 140 (245)
+.|.+.+.|++++..+.... ...|.|.++...|.|.|+|.+.|..|. ....+.|.+.
T Consensus 144 g~p~~~v~W~~~~~~~~~~~---------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~ 201 (218)
T 3k0w_A 144 GSPIPHYQWFKNELPLTHET---------KKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIID 201 (218)
T ss_dssp BSSCCEEEEEETTEECTTCC---------SSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEEC
T ss_pred ccCCCeEEEEECCEECCCCC---------CCEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEe
Confidence 99999999999998876543 247999999999999999999998876 4445555554
No 105
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.82 E-value=5.4e-19 Score=139.52 Aligned_cols=167 Identities=13% Similarity=0.078 Sum_probs=109.2
Q ss_pred cceEEEee----cceEEEeccCCCCCEEEEEEEEcCCC---------C--ceeeEEEEEEec----CCeEEeecceEEec
Q psy12131 2 KEIELLYN----RESLDLDRVTLKLAGLYQCIASNNIG---------E--STSKNFIVNVIY----PPEVSVEKQWIHTA 62 (245)
Q Consensus 2 ~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~~~~~---------~--~~~~~~~l~v~~----~p~~~~~~~~~~~~ 62 (245)
+|+.+..+ ..+|.|.+++.+|+|.|+|.+.+..| . .....+.|.|.. +|.+...+....+.
T Consensus 66 ~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~ 145 (457)
T 1hzh_H 66 DRVTFTADTSANTAYMELRSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKST 145 (457)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECCCSCCC
T ss_pred CceEEEEeCCCCEEEEEECCCCcccCEEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCcccccc
Confidence 46776643 24799999999999999999998765 1 123445677764 56655444334467
Q ss_pred CCCeEEEEEEEeec-CC-CeEEEEECCEEeccCCcEEEEecCc----eeEEEEccCCCCCCeEEEEEEEeCCceeEEEEE
Q psy12131 63 PDMRAEIICNVYAN-PP-AKVEWFRDGTAITLGGRIDMHVSSE----KHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQ 136 (245)
Q Consensus 63 ~g~~~~l~C~~~~~-~~-~~~~w~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 136 (245)
.|+.+.|.|.+.+. |. +.+.|++++..+...........+. .+.|.|..+..+| |.|.|.+.|..+.......
T Consensus 146 ~g~~v~L~C~~~g~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~ 224 (457)
T 1hzh_H 146 SGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKK 224 (457)
T ss_dssp TTCCEEEEEEEESBBSCCCEEEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEEEEEE
T ss_pred CCCcEEEEEEEeEEeCCCeEEEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCcceeEE
Confidence 89999999999987 64 7999999885432111111111111 2478999999889 9999999998776544444
Q ss_pred EEecC----------------CCCcc-ccCc---c-ccCCCeeEEEEEeCCCCC
Q psy12131 137 LSGIP----------------NIPVF-QKSS---R-RLGPDGYRLVWQVDTYSG 169 (245)
Q Consensus 137 ~~~~~----------------~~p~~-~~~~---~-~~~~~~~~l~~~~~~~~~ 169 (245)
+.... .+|.. .... . ...|+.+.|.|.+.+.+|
T Consensus 225 v~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p 278 (457)
T 1hzh_H 225 AEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSH 278 (457)
T ss_dssp CCCCCSCSSCSCCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCT
T ss_pred ecccCCCcccccCCCCCccccCCceEEeECcCchhhcccCCceEEEEEEEcccC
Confidence 33210 12322 1111 1 356889999999976543
No 106
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.81 E-value=3e-19 Score=134.19 Aligned_cols=129 Identities=19% Similarity=0.214 Sum_probs=103.9
Q ss_pred ceEEEeccCCCCCEEEEEEEEcCCCCc-eeeEEEEEEecCCeEEeec-ceEEecCCCeEEEEEEEeecCCC-eEEEEECC
Q psy12131 11 ESLDLDRVTLKLAGLYQCIASNNIGES-TSKNFIVNVIYPPEVSVEK-QWIHTAPDMRAEIICNVYANPPA-KVEWFRDG 87 (245)
Q Consensus 11 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~~l~v~~~p~~~~~~-~~~~~~~g~~~~l~C~~~~~~~~-~~~w~~~~ 87 (245)
+.|.|.++..+|.|.|+|.|.|..+.. ....+.|.|..+|.+...+ ....+..|+.+.|.|.+.|.|.| .+.|++++
T Consensus 177 s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~ 256 (313)
T 4fqp_A 177 SLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTM 256 (313)
T ss_dssp EEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCEEEEEEEECCCSCEETTCCCEEEEEEEEEESCCCEEEEEETT
T ss_pred eeeeecccccccCeeEEEEEEccCcCccceeeeecccccCCccccccccceeecCCCeEEEEEEecCCCCCcEEEEEECC
Confidence 358899999999999999999976653 5567778888889876543 34456678999999999999998 69999999
Q ss_pred EEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEecCCCCc
Q psy12131 88 TAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIPNIPV 145 (245)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~~~p~ 145 (245)
..+.... .. ....|.|.++...|.|.|.|.|.|..|.....+.|.+...||.
T Consensus 257 ~~l~~~~--~~----~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~PP~ 308 (313)
T 4fqp_A 257 GPLPPFA--VA----QGAQLLIRPVDKPINTTLICNVTNALGARQAELTVQVKEGPPH 308 (313)
T ss_dssp BSCCTTE--EE----ETTEEEECCCSSCCEEEEEEEEECSSCEEEEEEEEEEECCC--
T ss_pred EECCCce--EE----eCCEEEECcCChhhCEEEEEEEEeCCCcEEEEEEEEEEeCCCC
Confidence 8775432 11 1247999999999999999999999999999999988877774
No 107
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.81 E-value=1e-17 Score=117.19 Aligned_cols=175 Identities=16% Similarity=0.201 Sum_probs=119.9
Q ss_pred CCeEEeecceEEecCCCeEEEEEEEe-ecCCCeEEEEECCEEeccCC--cEEEEecCc-------eeEEEEccCCCCCCe
Q psy12131 49 PPEVSVEKQWIHTAPDMRAEIICNVY-ANPPAKVEWFRDGTAITLGG--RIDMHVSSE-------KHSLLVRHIKDTDFG 118 (245)
Q Consensus 49 ~p~~~~~~~~~~~~~g~~~~l~C~~~-~~~~~~~~w~~~~~~~~~~~--~~~~~~~~~-------~~~l~i~~~~~~d~g 118 (245)
+|.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+.... ++.+..... ...|.|.++...|.|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 81 (195)
T 2c5d_C 2 ESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTG 81 (195)
T ss_dssp CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCE
T ss_pred CCeeccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCc
Confidence 67777888888999999999999999 99999999999999887653 333333222 468999999999999
Q ss_pred EEEEEEEeCCceeEE-EEEEEecCCCCccccC---ccccCCCeeEEEEEeCCCCCceEEEEEEEeecCCCCeEEEeeCCC
Q psy12131 119 NYMCQASNNLGSSQQ-FIQLSGIPNIPVFQKS---SRRLGPDGYRLVWQVDTYSGIIQYLLKFREREELTPWRNIVIPSD 194 (245)
Q Consensus 119 ~y~C~~~n~~g~~~~-~~~~~~~~~~p~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (245)
.|.|.+.|..|.... .+.+.+... |.+... .....++.+.|.|.+.+.++...+ .|+++...-. ....
T Consensus 82 ~Y~C~~~~~~~~~~~~~~~l~V~~~-p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v-~W~~~~~~~~------~~~~ 153 (195)
T 2c5d_C 82 QYQCLVFLGHQTFVSQPGYVGLEGL-PYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDL-LWLQDAVPLA------TAPG 153 (195)
T ss_dssp EEEEEEEETTEEEECCCEEEEECCS-CEEEECCCCEEECTTCCEEEEEEEECSSCCCEE-EEEESSCBSS------SSTT
T ss_pred EEEEEEEeCCCceecccEEEEEecC-CeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEE-EEEECCEecc------CCCC
Confidence 999999998776443 255555433 332221 234668899999999776443233 3555433000 0000
Q ss_pred CCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCC-CCcceEE
Q psy12131 195 GSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSR-PSKAYVF 238 (245)
Q Consensus 195 ~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~-~s~~~~~ 238 (245)
. .....+.|.++.+. +.|+|.|.|..|... .+..+.+
T Consensus 154 ~-----~~~~~L~i~~~~d~--G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 154 H-----GPQRSLHVPGLNKT--SSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp S-----SCCEEEEECCCSSC--EEEEEEEEETTEEEECCCEEEEE
T ss_pred c-----CCCCeEEEcccccC--ceEEEEEEcCCCceEEEEEEEEE
Confidence 0 11267888888854 566667999999874 5555655
No 108
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.81 E-value=3.4e-18 Score=118.52 Aligned_cols=123 Identities=21% Similarity=0.373 Sum_probs=101.3
Q ss_pred eEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecC-CCeEEEEE---CC
Q psy12131 12 SLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANP-PAKVEWFR---DG 87 (245)
Q Consensus 12 ~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~-~~~~~w~~---~~ 87 (245)
.|.|. +.+|+|.|+|.+.+. ....+.|.|..+|.+...+....+..|+.+.|.|.+.+.| .+.+.|++ ++
T Consensus 52 ~l~i~--~~~d~G~Y~C~~~n~----~~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~ 125 (184)
T 3b5h_A 52 EFKVD--SDDQWGEYSCVFLPE----PMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSE 125 (184)
T ss_dssp EEEEC--GGGCCEEEEEEEEST----TSCEEEEEECCSCCCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSS
T ss_pred EEEEe--chhhCeEEEEEEECC----cCcEEEEEEecCCceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCC
Confidence 35555 689999999999982 3467788999999988888777889999999999999999 79999999 44
Q ss_pred E-Eecc--CCcEEEEecCceeEEEEccCC-CCCCeEEEEEEEeCCceeEEEEEEEec
Q psy12131 88 T-AITL--GGRIDMHVSSEKHSLLVRHIK-DTDFGNYMCQASNNLGSSQQFIQLSGI 140 (245)
Q Consensus 88 ~-~~~~--~~~~~~~~~~~~~~l~i~~~~-~~d~g~y~C~~~n~~g~~~~~~~~~~~ 140 (245)
. .+.. ..++.+...+..+.|.|.++. .+|.|.|.|.|.|..|.....+.|.+.
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 182 (184)
T 3b5h_A 126 DKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVR 182 (184)
T ss_dssp CEECCTTGGGTEEEEEETTEEEEEECSCCTTTSSEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CEEeecCCCCEEEEEecCCeeEEEEeeccccccCceEEEEEEeCCCcceEEEEEEEe
Confidence 4 3432 246666666667899999999 899999999999999998888777664
No 109
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.81 E-value=7.6e-19 Score=146.99 Aligned_cols=215 Identities=14% Similarity=0.096 Sum_probs=92.2
Q ss_pred eecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecC--CeEEeec-ceEEecCCCeEEEEEEEeec--CCCeEE
Q psy12131 8 YNRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYP--PEVSVEK-QWIHTAPDMRAEIICNVYAN--PPAKVE 82 (245)
Q Consensus 8 ~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~--p~~~~~~-~~~~~~~g~~~~l~C~~~~~--~~~~~~ 82 (245)
.....|.|.+++.+|+|.|+|.+.+......+..+.+.+..+ |.+...+ ....+..|+.+.|.|.+.+. +.+.+.
T Consensus 180 ~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~~~v~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~ 259 (772)
T 3v2a_R 180 DSKKGFTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFN 259 (772)
T ss_dssp ETTTEEEEEGGGTTTCSEEEEEEEETTEEEECCEEEEEEECCCEEEEEEECCSCEEEETTCCEEEEEEEEECTTCCCEEE
T ss_pred CCCCCeEecCCChhhCeEEEEEEEECCceEEEEEEEEEEecCccceeeeCCCCceEEecCCcEEEEEEEecCCCCceeEE
Confidence 345669999999999999999999764432333455555433 3333333 33678899999999999884 456899
Q ss_pred EEECCEEeccCCcEEE--------EecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEecCCCCccc-----cC
Q psy12131 83 WFRDGTAITLGGRIDM--------HVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIPNIPVFQ-----KS 149 (245)
Q Consensus 83 w~~~~~~~~~~~~~~~--------~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~~~p~~~-----~~ 149 (245)
|++++..+........ ......+.|.|.++..+|.|.|+|.+.|..+.....+.+.+...|.... ..
T Consensus 260 W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~ 339 (772)
T 3v2a_R 260 WEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKPFVAFGSGMESL 339 (772)
T ss_dssp EECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECSSCEEEEEEEEEEECCCC----------
T ss_pred EecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcCCcceeEEEEEEEeCCCeeEeccCCCCc
Confidence 9998876544322211 0112346899999999999999999999988777777766654332211 12
Q ss_pred ccccCCCeeEEEEEeCCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCC
Q psy12131 150 SRRLGPDGYRLVWQVDTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGW 229 (245)
Q Consensus 150 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~ 229 (245)
.....++.+.|.|.+.+.++. .+. |+++.. .... ..... ....+.|..+...+.+.|+|.|.|..|.
T Consensus 340 ~~v~~G~~v~l~C~~~~~p~~-~v~-W~~~g~-~l~~-~~~~~---------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 406 (772)
T 3v2a_R 340 VEATVGERVRIPAKYLGYPPP-EIK-WYKNGI-PLES-NHTIK---------AGHVLTIMEVSERDTGNYTVILTNPISK 406 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEcCCCcEEEEEEEeeeCCC-eEE-EEECCE-eCCC-CceEc---------cceeEEEecCChhcCceEEEEEEECCcC
Confidence 335678899999999765433 222 444432 0000 00010 1156778888888888889999999997
Q ss_pred CCCCcc
Q psy12131 230 SRPSKA 235 (245)
Q Consensus 230 ~~~s~~ 235 (245)
...+..
T Consensus 407 ~~~s~~ 412 (772)
T 3v2a_R 407 EKQSHV 412 (772)
T ss_dssp ------
T ss_pred eEEEEE
Confidence 655443
No 110
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.81 E-value=4.9e-19 Score=124.63 Aligned_cols=127 Identities=13% Similarity=0.133 Sum_probs=95.5
Q ss_pred cceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEE
Q psy12131 10 RESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTA 89 (245)
Q Consensus 10 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~ 89 (245)
..+|.|.+++.+|+|.|+|.+.+..+. ....+.|.|..+|..... ....+..|+.+.|.|.+.|.|.|.+.|++++..
T Consensus 66 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~-~~~~~~l~V~~~~~~p~~-~~~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~ 143 (202)
T 3bp6_B 66 KALFHIPSVQVRDSGQYRCLVICGAAW-DYKYLTVKVKASYMRIDT-RILEVPGTGEVQLTCQARGYPLAEVSWQNVSVP 143 (202)
T ss_dssp EEEEEECSCCGGGCEEEEEEEEETTEE-EEEEEEEEEEBCCCCEEE-EEEECTTTCCEEEEEEEEEBSCCEEEETTCCSC
T ss_pred eeEEEECCCCHHHCcEEEEEEEeCCCc-ceEEEEEEecCCCCcccE-EEEecCCCCeEEEEEEccccCCceEEEEeCCCC
Confidence 367999999999999999999998776 578888988876532111 112457899999999999999999999987764
Q ss_pred eccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEec
Q psy12131 90 ITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGI 140 (245)
Q Consensus 90 ~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~ 140 (245)
+.. .......+....+.+..+...|.|.|+|.|.|..|.....+.+.+.
T Consensus 144 ~~~--~~~~~~~~~~~~~~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v~ 192 (202)
T 3bp6_B 144 ANT--SHIRTPEGLYQVTSVLRLKPQPSRNFSCMFWNAHMKELTSAIIDPL 192 (202)
T ss_dssp CEE--EEEECTTSCEEEEEEEEECCCTTCCEEEEEEETTTTEEEEEEECC-
T ss_pred ccC--ceeeCCCCCEEEEEEEEEEcCCCCEEEEEEEcCCcccccEEEEEec
Confidence 321 1111122223456677888899999999999999988887777653
No 111
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.81 E-value=4e-18 Score=118.86 Aligned_cols=178 Identities=19% Similarity=0.233 Sum_probs=122.9
Q ss_pred CCeEEeecc--eEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEe
Q psy12131 49 PPEVSVEKQ--WIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASN 126 (245)
Q Consensus 49 ~p~~~~~~~--~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 126 (245)
||.+...+. ...+.+|+.+.|.|.+.+.|.+.+.|++++..+....++.+.. ....|.|.++...|.|.|.|.+.|
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~--~~~~L~i~~~~~~d~G~Y~C~~~~ 79 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKG--SNTELTVRNIINSDGGPYVCRATN 79 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEEET--TTTEEEECSCCGGGCEEEEEEEEE
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEeC--CeeEEEEecCChhcCcEEEEEEEc
Confidence 566655433 4677899999999999999999999999999888776665533 345799999999999999999999
Q ss_pred CCceeEEEEEEEecCCCCccc-cCccccCCCeeEEEEEeCCCCCceEEEEEEEeec----CC-----CCeEEEeeCCCCC
Q psy12131 127 NLGSSQQFIQLSGIPNIPVFQ-KSSRRLGPDGYRLVWQVDTYSGIIQYLLKFRERE----EL-----TPWRNIVIPSDGS 196 (245)
Q Consensus 127 ~~g~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~----~~-----~~~~~~~~~~~~~ 196 (245)
..|.....+.+.+...|.... .......+..+.|.|.+.+.++. . ..|+++.. .. .....+....
T Consensus 80 ~~~~~~~~~~l~V~~~p~~~~~~~~~~~~g~~v~l~C~~~~~p~~-~-v~W~~~~~~~~~~~~~~~~~~~~~~~~~~--- 154 (192)
T 2va4_A 80 KAGEDEKQAFLQVFVQPHIIQLKNETTYENGQVTLVCDAEGEPIP-E-ITWKRAVDGFTFTEGDKSLDGRIEVKGQH--- 154 (192)
T ss_dssp TTEEEEEEEEEEEEEEEEEEEECCEEECTTSEEEEEEEEEEESCC-E-EEEEETTTTEEECTTCBCTTSCEEEEEET---
T ss_pred cccccceEEEEEEEccCcccccCcceEEeCCeEEEEEEecCCCCC-c-EEEEeCCCCceeeccccccCCcEEEeecc---
Confidence 988877766666543332211 11234568899999999665433 2 33444421 00 0001111000
Q ss_pred CCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceEE
Q psy12131 197 LAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYVF 238 (245)
Q Consensus 197 ~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~ 238 (245)
....+.|.++...+.+.|+|.|.|..|....+..+.|
T Consensus 155 -----~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 191 (192)
T 2va4_A 155 -----GSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDI 191 (192)
T ss_dssp -----TEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred -----CceEEEEecCCcccCEEEEEEEEecCCceEEEEEEEe
Confidence 1256889999999999999999999998655544443
No 112
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.80 E-value=1.8e-18 Score=136.26 Aligned_cols=191 Identities=9% Similarity=0.059 Sum_probs=121.5
Q ss_pred ceEEEeccCCCCCEEEEEEEEcCCCCc-------eeeEEEEEEecC----CeEEeecceEEecCCCeEEEEEEEeec-C-
Q psy12131 11 ESLDLDRVTLKLAGLYQCIASNNIGES-------TSKNFIVNVIYP----PEVSVEKQWIHTAPDMRAEIICNVYAN-P- 77 (245)
Q Consensus 11 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~-------~~~~~~l~v~~~----p~~~~~~~~~~~~~g~~~~l~C~~~~~-~- 77 (245)
..|.|.+++.+|+|.|+|.|.|..|.. .+....|.|... |.+... ..+.+|+.+.|.|.+.|. |
T Consensus 142 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~~~~~---~~v~~G~~v~l~C~~~g~~P~ 218 (450)
T 1z7z_I 142 VTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSP---RVLEVDTQGTVVCSLDGLFPV 218 (450)
T ss_dssp EEEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCCSSCCEEECC---SEEETTSEEEEEEEEESCTTG
T ss_pred eEEEEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeeeccCCCCCEecCc---eeEEeCCcEEEEEEeeCCCCC
Confidence 469999999999999999999986631 124455555533 322211 467799999999999998 6
Q ss_pred -CCeEEEEECCEEeccCCcEEEEecCceeEEE-EccCCCCCCe--EEEEEEEeCCceeEEEEEEEecCC-CCccc-cCcc
Q psy12131 78 -PAKVEWFRDGTAITLGGRIDMHVSSEKHSLL-VRHIKDTDFG--NYMCQASNNLGSSQQFIQLSGIPN-IPVFQ-KSSR 151 (245)
Q Consensus 78 -~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~-i~~~~~~d~g--~y~C~~~n~~g~~~~~~~~~~~~~-~p~~~-~~~~ 151 (245)
.+.+.|++++..+.. ..... +....+. ..++..+|.| .|.|.+.|..|.......+.+... +|.+. ....
T Consensus 219 ~~~~~~W~~~~~~~~~--~~~~~--~~~~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~~~~~~~l~V~~~~~p~i~~~~~~ 294 (450)
T 1z7z_I 219 SEAQVHLALGDQRLNP--TVTYG--NDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVILTKPE 294 (450)
T ss_dssp GGCEEEEEETTEECCC--EEEEE--TTEEEEEEEEECCGGGCEEEEEEEEEEETTEEEEEEEEEEEECCCCCEEEESCSE
T ss_pred CceEEEEeCCCEeCCc--eEEec--CCceeEEEEEEeEhhhCCcEEEEEEEccCCccEEEEEEEEEecCCCCeEecCCee
Confidence 689999999987765 22222 2222221 2267889999 999999999988766665554421 23332 2234
Q ss_pred ccCCCeeEEEEEeCCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCC
Q psy12131 152 RLGPDGYRLVWQVDTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFG 228 (245)
Q Consensus 152 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G 228 (245)
...++.+.|.|.+. ..|... | +.. .. ..... ...+.|..+...+.+.|+|.|.|..|
T Consensus 295 v~~G~~v~l~C~~~-p~p~i~----W-~g~---~~---~~~~~--------~~~L~i~~~~~~d~G~Y~C~a~n~~~ 351 (450)
T 1z7z_I 295 VSEGTEVTVKCEAH-PRAKVT----L-NGV---PA---QPLGP--------RAQLLLKATPEDNGRSFSCSATLEVA 351 (450)
T ss_dssp EETTCEEEEEEEC----------------------------CC--------CCCEEEECCGGGTTCEEEEEEEEEET
T ss_pred EeCCCcEEEEEecC-CCCEeE----E-CCE---Ec---CCCCc--------eEEEEEecCcccCCceEEEEEEcCCC
Confidence 67889999999997 223222 2 211 11 01111 13567778777777777777998765
No 113
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.80 E-value=7.8e-18 Score=133.50 Aligned_cols=226 Identities=12% Similarity=0.062 Sum_probs=130.5
Q ss_pred cceEEEee----cceEEEeccCCCCCEEEEEEEEcCCCC-----ceeeEEEEEEec----CCeEEeecceEEecCCCeEE
Q psy12131 2 KEIELLYN----RESLDLDRVTLKLAGLYQCIASNNIGE-----STSKNFIVNVIY----PPEVSVEKQWIHTAPDMRAE 68 (245)
Q Consensus 2 ~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~~~~~~-----~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~ 68 (245)
+|+.+..+ ..+|.|.+++.+|+|.|+|.+.+..|. .....+.|.|.. +|.+...+. ..+.+|+.+.
T Consensus 67 ~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~-~~~~~g~~v~ 145 (475)
T 1iga_A 67 GRVTFTRDTSATTAYMGLSSLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLSL-CSTQPDGNVV 145 (475)
T ss_pred CceEEEEcCCCCeEEEEECCCChhhCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecCc-cccCCCCeEE
Confidence 46666542 357999999999999999999987652 122345677763 455443322 2236899999
Q ss_pred EEEEEeec-CC-C-eEEEEECCEEeccCCcEEEE--ecC---ceeEEEEccCCCCCCeEEEEEEEeCCcee-EEEEEEEe
Q psy12131 69 IICNVYAN-PP-A-KVEWFRDGTAITLGGRIDMH--VSS---EKHSLLVRHIKDTDFGNYMCQASNNLGSS-QQFIQLSG 139 (245)
Q Consensus 69 l~C~~~~~-~~-~-~~~w~~~~~~~~~~~~~~~~--~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~-~~~~~~~~ 139 (245)
|.|.+.|. |. | .+.|++++..........+. ..+ ..+.|.|......|.|.|.|.+.|..+.. ...+.+.+
T Consensus 146 L~C~~~g~~P~~p~~v~W~~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~v~l~V 225 (475)
T 1iga_A 146 IACLVQGFFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQDVTVPCPV 225 (475)
T ss_pred EEEEEeeecCCCceEEEEcCCCcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCceeeeEeccc
Confidence 99999987 55 5 99999877432110000000 111 12358888888889999999999987642 22333222
Q ss_pred c---------------C--CCCcc-ccC---ccccCCCeeEEEEEeCCCCCceEEEEEEEeecCCCCeEE-EeeCCCCCC
Q psy12131 140 I---------------P--NIPVF-QKS---SRRLGPDGYRLVWQVDTYSGIIQYLLKFREREELTPWRN-IVIPSDGSL 197 (245)
Q Consensus 140 ~---------------~--~~p~~-~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 197 (245)
. + .+|.. ... .....++.+.|.|.+.+..|.....+.|+.......... ......+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W~~~~~~~~~~~~~~~~~~g-- 303 (475)
T 1iga_A 226 PSTPPTPSPSTPPTPSPSCCHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTWTPSSGKSAVQGPPERDLCG-- 303 (475)
T ss_pred ccCcccccccccccCCCCCCCcEEEEcCCChHHhccCCceEEEEEEEcccCCCceEEEECCCCcCCccccCceECCCC--
Confidence 0 0 12221 111 113678899999999765441111233322110000000 0000000
Q ss_pred CcceeeeEEEecCCCCCceEEEEEEEEecCCCCC
Q psy12131 198 AGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSR 231 (245)
Q Consensus 198 ~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~ 231 (245)
.......+.|..+...+...|+|.|.|..|...
T Consensus 304 -~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~~ 336 (475)
T 1iga_A 304 -CYSVSSVLPGCAEPWNHGKTFTCTAAYPESKTP 336 (475)
T ss_pred -CEEEEEEEEEchHHhccCCcEEEEEEcCCCCCc
Confidence 001234577888877777777788999998754
No 114
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.80 E-value=7.6e-18 Score=118.86 Aligned_cols=177 Identities=15% Similarity=0.135 Sum_probs=116.2
Q ss_pred CeEEeecceEEecCCCeEEEEEEEee-cCCCeEEEEECCEEeccCCcEEEEecC--ceeEEEEccCCCCCCeEEEEEEEe
Q psy12131 50 PEVSVEKQWIHTAPDMRAEIICNVYA-NPPAKVEWFRDGTAITLGGRIDMHVSS--EKHSLLVRHIKDTDFGNYMCQASN 126 (245)
Q Consensus 50 p~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~~~~w~~~~~~~~~~~~~~~~~~~--~~~~l~i~~~~~~d~g~y~C~~~n 126 (245)
|.+.... ...+.+|+.+.|.|.+.+ .|.|.+.|++++..+....++.+.... ....|.|.++..+|.|.|+|.+.|
T Consensus 4 p~~~~~~-~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~N 82 (207)
T 3rbs_A 4 PFTKSEL-AVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD 82 (207)
T ss_dssp --CCEEE-EEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEE
T ss_pred CeeecCC-ceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEC
Confidence 4443333 567889999999999864 688999999999999877776665543 455799999999999999999999
Q ss_pred CCceeEEEEEEEec------------------CCCCccccC--ccccCCCeeEEEEEeCCCCCceEEEEEEEeecCCCCe
Q psy12131 127 NLGSSQQFIQLSGI------------------PNIPVFQKS--SRRLGPDGYRLVWQVDTYSGIIQYLLKFREREELTPW 186 (245)
Q Consensus 127 ~~g~~~~~~~~~~~------------------~~~p~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (245)
........+.+... ..+|.+... .....+..+.|.|.+.+..|...+ .|+++..
T Consensus 83 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~v~~g~~v~l~C~v~g~~P~p~i-~W~k~g~----- 156 (207)
T 3rbs_A 83 GKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVANIKKETHI-VWYKDER----- 156 (207)
T ss_dssp TTEEEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEEEEEEETTTEEEEEEEEESCCTTCEE-EEEETTE-----
T ss_pred CCeEEEEEEEEEccchhhhcccccccccccccCCCCceEecCCcEEcCCCcEEEEEEEeCCCCCCEE-EEEECCE-----
Confidence 44333222221100 024443322 235678899999999776222233 2555433
Q ss_pred EEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcce
Q psy12131 187 RNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAY 236 (245)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~ 236 (245)
.+.. ... .........+.|.++...+.+.|+|.|.|.+|....+..+
T Consensus 157 -~l~~-~~~-~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L 203 (207)
T 3rbs_A 157 -EISV-DEK-HDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKL 203 (207)
T ss_dssp -EECC-CCC-CCCSSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred -ECCC-CCc-eEcCCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEE
Confidence 0100 000 0111123569999999999999999999999987665544
No 115
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.80 E-value=1.5e-18 Score=129.77 Aligned_cols=128 Identities=21% Similarity=0.333 Sum_probs=98.1
Q ss_pred cceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEe---cCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEEC
Q psy12131 10 RESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVI---YPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRD 86 (245)
Q Consensus 10 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~---~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~ 86 (245)
...|.|.+++.+|+|.|+|.|.|..|...+....|.|. .+|.+...+....+..|+.+.|.|.+.|.|.|.+.|+++
T Consensus 163 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~ 242 (304)
T 2yd9_A 163 SGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSILPMSHEIMPGGNVNITCVAVGSPMPYVKWMQG 242 (304)
T ss_dssp TSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEECCCCBCCCTTCCEEEEEEEEEESCCEEEEEET
T ss_pred CeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEecCCceEEcCCCeEEEEEEEeeeCCCEEEEEEC
Confidence 34699999999999999999999887643333455553 567777777667788999999999999999999999999
Q ss_pred CEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEecCCC
Q psy12131 87 GTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIPNI 143 (245)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~~~ 143 (245)
+..+....... .....|.+.++ .|.|.|+|.|.|..|.....+.|.+...+
T Consensus 243 ~~~l~~~~~~~----~~~~~L~i~~~--~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~ 293 (304)
T 2yd9_A 243 AEDLTPEDDMP----VGRNVLELTDV--KDSANYTCVAMSSLGVIEAVAQITVKSLP 293 (304)
T ss_dssp TEECSCSSSCC----BSEEEEEECSC--CSCEEEEEEEEETTEEEEEEEEEC-----
T ss_pred CEECCCccccc----CCcEEEEEccc--ccCEEEEEEEEeCCCcEEEEEEEEEecCc
Confidence 99887654321 23345666665 58999999999999999888888876444
No 116
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.80 E-value=6.4e-20 Score=129.68 Aligned_cols=127 Identities=23% Similarity=0.453 Sum_probs=100.2
Q ss_pred ceEEEeecceEEEeccCCCCCEEEEEEEEcCCCCc-eeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEE-eecCCCe
Q psy12131 3 EIELLYNRESLDLDRVTLKLAGLYQCIASNNIGES-TSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNV-YANPPAK 80 (245)
Q Consensus 3 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~ 80 (245)
|+.+.. ..|.|.+++.+|+|.|+|.+.+..|.. .+..+.|.|..+|.+...+....+..|+.+.|.|.+ .+.|.+.
T Consensus 62 r~~~~~--~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~ 139 (209)
T 1nbq_A 62 RVTFLP--TGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSE 139 (209)
T ss_dssp TCEEET--TEEECSCCCTTSCSEEEEEEEETTSSCEECCEEECCEEBCCCCCCCCCBSEEETTSCEEECCCCCSCBSCCE
T ss_pred ceEeec--cEEEEeeCCHHHCcEEEEEEecCCCCccceEEEEEEEecCCcCCCcccccceecCCEEEEEEeCCCCCCCce
Confidence 444443 679999999999999999999986532 567788889888887665555567899999999996 8899999
Q ss_pred EEEEECCEEeccCCcE-------EEEecCceeEEEEccCCCCCCeEEEEEEEeCCcee
Q psy12131 81 VEWFRDGTAITLGGRI-------DMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSS 131 (245)
Q Consensus 81 ~~w~~~~~~~~~~~~~-------~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~ 131 (245)
+.|++++..+...... ........+.|.|.++..+|.|.|+|.+.|..|..
T Consensus 140 v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 197 (209)
T 1nbq_A 140 YTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTP 197 (209)
T ss_dssp EEEEETTCCCCSCSSSSSSCTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCC
T ss_pred eEEEECCeeCCCccccceeeeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCcc
Confidence 9999998877654321 01111234689999999999999999999999877
No 117
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=99.79 E-value=1.3e-16 Score=120.43 Aligned_cols=216 Identities=16% Similarity=0.124 Sum_probs=134.2
Q ss_pred ecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeec----CCCe--EE
Q psy12131 9 NRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYAN----PPAK--VE 82 (245)
Q Consensus 9 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~----~~~~--~~ 82 (245)
.++.|.|.+++..|+|.|+|.+ .|. ..+.+.|.|..+|... .......+....+.|..... .... +.
T Consensus 58 ~~~~L~i~~v~~~d~G~Y~C~~---~g~-~~~~~~L~V~~pP~~P---~l~c~~~~~~~~~~c~W~~~~~~~~~~~y~l~ 130 (325)
T 1n26_A 58 MGRRLLLRSVQLHDSGNYSCYR---AGR-PAGTVHLLVDVPPEEP---QLSCFRKSPLSNVVCEWGPRSTPSLTTKAVLL 130 (325)
T ss_dssp ESSEEEECSCCGGGCEEEEEES---SSS-CSCEEEEEECCCCCCC---CCEEEBSSTTSCEEEEECCSSCCCTTCEEEEE
T ss_pred ccceEEecccchhhCeEeEEEe---CCE-EeeeEEEEeccCCCCC---ceeEEeecCCCcEEEEECCCCCCCCCceEEEE
Confidence 3567999999999999999993 455 5677899999887632 22222123233555655321 1112 22
Q ss_pred EEEC-CEEeccCCcE--EE--EecCceeEEEEccCC-CCCCeEEEEEEEeCCceeEE-EEEE----EecCCCCccccCcc
Q psy12131 83 WFRD-GTAITLGGRI--DM--HVSSEKHSLLVRHIK-DTDFGNYMCQASNNLGSSQQ-FIQL----SGIPNIPVFQKSSR 151 (245)
Q Consensus 83 w~~~-~~~~~~~~~~--~~--~~~~~~~~l~i~~~~-~~d~g~y~C~~~n~~g~~~~-~~~~----~~~~~~p~~~~~~~ 151 (245)
+.+. +.. .... .. ........+.+..+. ....+.++|.|.|..|.... ...+ .+.|.||.......
T Consensus 131 ~~~~~~~~---~~~~~~~c~~~~~~~~~~c~i~~~~~~~~~Y~f~v~A~N~~G~~~s~~~~~~~~~~v~P~pP~~l~v~~ 207 (325)
T 1n26_A 131 VRKFQNSP---AEDFQEPCQYSQESQKFSCQLAVPEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTA 207 (325)
T ss_dssp EEEESSSS---CEEEEEEEEEETTTTEEEEEECCCTTCCCEEEEEEEEEETTEEEECCCEEEETTTCBCCCCCEEEEEEE
T ss_pred EEEccCCC---CCcccccCCCCCCCCCEEEEECCCcccCcEEEEEEEEEcCCCCcccCcEEEeeccccCCCCCcceEEEE
Confidence 2221 100 0000 00 011233456676654 34567788999999987542 2222 24566776544332
Q ss_pred cc-CCCeeEEEEEeCC----CCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEec
Q psy12131 152 RL-GPDGYRLVWQVDT----YSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNR 226 (245)
Q Consensus 152 ~~-~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~ 226 (245)
.. ....+.|+|.++. +.+++.|.++|+... ...|..+...... ..+.+.+|.+++.|.|||+|.|.
T Consensus 208 ~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~-~~~W~~~~~~~~~--------~~~~l~~L~p~t~Y~~rVrA~n~ 278 (325)
T 1n26_A 208 VARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAER-SKTFTTWMVKDLQ--------HHCVIHDAWSGLRHVVQLRAQEE 278 (325)
T ss_dssp CTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETT-CSCCEEEECGGGC--------SEEEESSCCTTCCEEEEEEEEET
T ss_pred ecCCCCEEEEEECCCCccCCCcEeEEEEEEEEeCC-CCCCEEEcccCCc--------eEEEEeCCCCCCeEEEEEEEecC
Confidence 22 2358999999843 346799999999875 6679876543222 67899999999999999999999
Q ss_pred CCCCCC---CcceEEecCCC
Q psy12131 227 FGWSRP---SKAYVFATEGA 243 (245)
Q Consensus 227 ~G~~~~---s~~~~~~t~~~ 243 (245)
.|.|.+ |..+..++..+
T Consensus 279 ~g~G~~S~wS~~~~~~~~~~ 298 (325)
T 1n26_A 279 FGQGEWSEWSPEAMGTPWTE 298 (325)
T ss_dssp TTBSCCCCCCCCEEECCCCC
T ss_pred CCCCCCcCCCCccceecCCC
Confidence 886555 45666666443
No 118
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.79 E-value=6.5e-18 Score=123.27 Aligned_cols=143 Identities=16% Similarity=0.211 Sum_probs=103.4
Q ss_pred cceEEEee----cceEEEeccCCCCCEEEEEEEEcCCCC----ceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEE
Q psy12131 2 KEIELLYN----RESLDLDRVTLKLAGLYQCIASNNIGE----STSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNV 73 (245)
Q Consensus 2 ~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~~~~~~----~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~ 73 (245)
+|+.+..+ ..+|.|.+++.+|+|.|+|.+.+..|. .....+.|.|..+|.+...+....+.+|+.+.|.|.+
T Consensus 66 ~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~p~~~~v~~G~~v~L~C~~ 145 (256)
T 1nqb_A 66 SKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQTPLSLPVSLGDQASISCRS 145 (256)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEEECSEEEECTTCCEEEEEEE
T ss_pred CeEEEEEecCCCEEEEEECcCChhhCEEEEEEEeeccCccceeEEcCceeeeecccccEEecCcEEEEecCCcEEEEeEe
Confidence 46666643 357999999999999999999998652 1234577888888887777777888999999999999
Q ss_pred eecCCC-----eEEEEE--CCEEec------------cCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCce-eEE
Q psy12131 74 YANPPA-----KVEWFR--DGTAIT------------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGS-SQQ 133 (245)
Q Consensus 74 ~~~~~~-----~~~w~~--~~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~-~~~ 133 (245)
.+.+.+ .+.|++ ++..+. ...++..........|.|.++..+|.|.|.|.+.+.... ...
T Consensus 146 ~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~ 225 (256)
T 1nqb_A 146 SQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGG 225 (256)
T ss_dssp SSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECC
T ss_pred cCcccccccceEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCCceEECC
Confidence 988765 999999 554321 123555544445678999999999999999999985432 122
Q ss_pred EEEEEecCCCC
Q psy12131 134 FIQLSGIPNIP 144 (245)
Q Consensus 134 ~~~~~~~~~~p 144 (245)
...|.+.+.+|
T Consensus 226 gt~l~V~~~~~ 236 (256)
T 1nqb_A 226 GTKLEIKRAAA 236 (256)
T ss_dssp CEEEEECC---
T ss_pred CEEEEEECCCC
Confidence 33344444444
No 119
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.79 E-value=2.6e-18 Score=124.15 Aligned_cols=193 Identities=16% Similarity=0.210 Sum_probs=124.0
Q ss_pred cCCeEEee----cceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcE-EEEecCceeEEEEccCCCCCCeEEEE
Q psy12131 48 YPPEVSVE----KQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRI-DMHVSSEKHSLLVRHIKDTDFGNYMC 122 (245)
Q Consensus 48 ~~p~~~~~----~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~-~~~~~~~~~~l~i~~~~~~d~g~y~C 122 (245)
.+|.+..+ +....+.+|+.+.|.|.+.+.|.+.+.|++++..+...... ..........|.|.++...|.|.|+|
T Consensus 10 ~~P~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 89 (241)
T 3grw_A 10 GAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTC 89 (241)
T ss_dssp -CCEESSGGGGSCCEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEE
T ss_pred CCceeEcCCCCCCcceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEE
Confidence 35655433 34577889999999999999999999999999887654322 11122234589999999999999999
Q ss_pred EEEeCCceeEEEEEEEecCC---CCccc----cCccccCCCeeEEEEEeCCCCCceEEEEEEEe----ec----CCCCeE
Q psy12131 123 QASNNLGSSQQFIQLSGIPN---IPVFQ----KSSRRLGPDGYRLVWQVDTYSGIIQYLLKFRE----RE----ELTPWR 187 (245)
Q Consensus 123 ~~~n~~g~~~~~~~~~~~~~---~p~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~----~~----~~~~~~ 187 (245)
.+.|..|.....+.+.+... +|... .......+..+.|.|.+.+.++. .+ .|++. .. ......
T Consensus 90 ~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p-~v-~W~~~~~~~g~~~~~~~~~~~ 167 (241)
T 3grw_A 90 VVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQP-HI-QWLKHVEVNGSKVGPDGTPYV 167 (241)
T ss_dssp EEEETTEEEEEEEEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCC-EE-EEEEECCSSSCSSCTTTCCCE
T ss_pred EEeecCCceEEEEEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCC-EE-EEEEcccCCCcccCCCCceee
Confidence 99999888777766665432 22222 11234668899999999666443 33 34442 11 001110
Q ss_pred EEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceEEecCCCC
Q psy12131 188 NIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYVFATEGAE 244 (245)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~~t~~~~ 244 (245)
...... ..........+.|.++...+.+.|+|.|.|..|....+..+.+...+.+
T Consensus 168 ~~~~~~--~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~ 222 (241)
T 3grw_A 168 TVLKSW--ISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPRAA 222 (241)
T ss_dssp EEEEEE--ECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC------
T ss_pred eeeeEe--eeeecCCceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEecCCCCC
Confidence 000000 0001112367889999999999999999999998877777777666654
No 120
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.79 E-value=2e-18 Score=125.44 Aligned_cols=128 Identities=20% Similarity=0.243 Sum_probs=94.5
Q ss_pred ceEEEeccCCCCCEEEEEEEEcCCCCc----eeeEEEEEEecC---CeEEee-cceEEecCCCeEEEEEEEeecCCCeEE
Q psy12131 11 ESLDLDRVTLKLAGLYQCIASNNIGES----TSKNFIVNVIYP---PEVSVE-KQWIHTAPDMRAEIICNVYANPPAKVE 82 (245)
Q Consensus 11 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~----~~~~~~l~v~~~---p~~~~~-~~~~~~~~g~~~~l~C~~~~~~~~~~~ 82 (245)
.+|.|.+++.+|+|.|+|.+.+..+.. ..+.+.|.|..+ |.+... +....+.+|+.+.|.|.+.+.|.|.+.
T Consensus 90 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p~v~ 169 (250)
T 2fbo_J 90 PTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANANVT 169 (250)
T ss_dssp CCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCTTCEEE
T ss_pred ceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCCCCeeE
Confidence 469999999999999999999877642 245788888864 333332 345667789999999999999999999
Q ss_pred EEECCEEeccCCcE--EEE-------------------ecCceeEEEEccCCCCCCeEEEEEEEeC---CceeEEEEEEE
Q psy12131 83 WFRDGTAITLGGRI--DMH-------------------VSSEKHSLLVRHIKDTDFGNYMCQASNN---LGSSQQFIQLS 138 (245)
Q Consensus 83 w~~~~~~~~~~~~~--~~~-------------------~~~~~~~l~i~~~~~~d~g~y~C~~~n~---~g~~~~~~~~~ 138 (245)
|++++..+...... ... .......|.|.++..+|.|.|+|.|.|. .|.....+.|.
T Consensus 170 W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~g~~~~~~~l~ 249 (250)
T 2fbo_J 170 WYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGELDADRSSTILK 249 (250)
T ss_dssp EEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSSGGGEEEEEEEEE
T ss_pred EEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCCccccCccceeEEEe
Confidence 99988766442211 000 0002258999999999999999999994 45555555543
No 121
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.79 E-value=2e-18 Score=120.40 Aligned_cols=179 Identities=16% Similarity=0.175 Sum_probs=120.6
Q ss_pred ecCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEecc-CCcEEEEecCceeEEEEccCCCCCCeEEEEEEE
Q psy12131 47 IYPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITL-GGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQAS 125 (245)
Q Consensus 47 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 125 (245)
..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ..++.+... ...|.|.++...|.|.|.|.+.
T Consensus 5 ~~~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~~~ 82 (192)
T 2iep_A 5 PKAPVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIREN--GQLLTILSVEDSDDGIYCCTAN 82 (192)
T ss_dssp CEEEEESSCCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEGG--GTEEEESSCCGGGCEEEEEEEE
T ss_pred CCCceeecCccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcCC--ccEEEEcCCCcccCeEEEEEEE
Confidence 3466776667778889999999999999999999999999988764 345544432 3479999999999999999999
Q ss_pred eCCcee-EEEEEEEecCCCCc--cccCccccCCCeeEEEEEeCCCCCceEEEEEEEeec--CCCCeEEEeeCCCCCCCcc
Q psy12131 126 NNLGSS-QQFIQLSGIPNIPV--FQKSSRRLGPDGYRLVWQVDTYSGIIQYLLKFRERE--ELTPWRNIVIPSDGSLAGP 200 (245)
Q Consensus 126 n~~g~~-~~~~~~~~~~~~p~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 200 (245)
|..|.. .....+.+...|.. .........+..+.|.|.+.+.++. . ..|+++.. ..... ......
T Consensus 83 ~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~-~-v~W~~~~~~~~~~~~--~~~~~~------ 152 (192)
T 2iep_A 83 NGVGGAVESCGALQVKMKPKITRPPINVKIIEGLKAVLPCTTMGNPKP-S-VSWIKGDSALRENSR--IAVLES------ 152 (192)
T ss_dssp CSSSCCEEEEEEEEEEEEEEEEECCCCEEEETTSCEEECCEEEEESCC-E-EEEEETTEECCCCSS--EEECTT------
T ss_pred cCCCceeEeEEEEEEEeCCccccCCcceEEeCCCcEEEEEEEeccCCc-e-EEEEeCCEEccCCCc--EEEecC------
Confidence 987763 33333333211111 1112234678899999999665433 2 23454433 11111 111111
Q ss_pred eeeeEEEecCCCCCceEEEEEEEEecCCCCC-CCcceEEec
Q psy12131 201 IYTQSYNITGLQLFTQYEASVLAKNRFGWSR-PSKAYVFAT 240 (245)
Q Consensus 201 ~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~-~s~~~~~~t 240 (245)
..+.|.++...+.+.|+|.|.|..|... .+..+.+..
T Consensus 153 ---~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~ 190 (192)
T 2iep_A 153 ---GSLRIHNVQKEDAGQYRCVAKNSLGTAYSKLVKLEVEV 190 (192)
T ss_dssp ---SCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred ---CcEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEEEEe
Confidence 3588899999999999999999999773 344555544
No 122
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.79 E-value=2.1e-20 Score=146.63 Aligned_cols=224 Identities=14% Similarity=0.080 Sum_probs=131.0
Q ss_pred cceEEEee----cceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEec----CCeEEeecceEEecCCCeEEEEEEE
Q psy12131 2 KEIELLYN----RESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIY----PPEVSVEKQWIHTAPDMRAEIICNV 73 (245)
Q Consensus 2 ~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~ 73 (245)
+|+.+..+ ..+|.|.+++.+|+|.|+|.+.+..+. ....+.|.|.. +|.+...+....+.+|+.+.|.|.+
T Consensus 65 ~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~-~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~ 143 (434)
T 1igy_B 65 DKATLTRDRSSNTANIHLSSLTSDDSAVYYCVREGEVPY-WGQGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLV 143 (434)
T ss_dssp TTEECCBCGGGCBBCEEECSBCGGGCSEECCCCSSSSCC-CCCCEECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEE
T ss_pred ccEEEEEECCCCEEEEEECCCChHHCEEEEEEEEccccc-cCCceEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEE
Confidence 35665542 346999999999999999999986433 34456677763 4555433333345789999999999
Q ss_pred eec-CCC-eEEEEECCEEeccCCcEEEEecC---ceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEec--------
Q psy12131 74 YAN-PPA-KVEWFRDGTAITLGGRIDMHVSS---EKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGI-------- 140 (245)
Q Consensus 74 ~~~-~~~-~~~w~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~-------- 140 (245)
.|. |.| .+.|++++..............+ ..+.|.|..+..+| |.|.|.+.|..|.......+...
T Consensus 144 ~g~~P~p~~v~W~k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~~~~~~~~~~v~~ 222 (434)
T 1igy_B 144 KGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASSTKVDKKIVPRDCGCKPCI 222 (434)
T ss_dssp EEEBSSCCEEEETTTTBCSSEEECCCEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTCCEEEECCCCCCCCCCCC
T ss_pred eeecCCCeEEEEeeCCcCCCeEecCceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCccceeeccCCCCCCcccc
Confidence 986 666 99999988642110000000001 12468899988888 99999999998875443333221
Q ss_pred ---CC-CCccccCc--c--ccCCCeeEEEEEeCCCCC---ceEEEEEEEeecC---CCCeEEEeeCCCCCCCcceeeeEE
Q psy12131 141 ---PN-IPVFQKSS--R--RLGPDGYRLVWQVDTYSG---IIQYLLKFREREE---LTPWRNIVIPSDGSLAGPIYTQSY 206 (245)
Q Consensus 141 ---~~-~p~~~~~~--~--~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 206 (245)
+. |..+.... . ...++.+.|.|.+.+..| ... ..|+++... ....... ..... .......+
T Consensus 223 ~~~~~~p~v~~~~p~~~~~v~~G~~~~L~C~~~g~~p~P~~~~-i~W~k~~~~~~~~~~~~~~-~~~~~---~~~~~~~L 297 (434)
T 1igy_B 223 CTVPEVSSVFIFPPKPKDTLLITVTPKVTCVVVDISKDDPEVQ-FSWFVDNVEVHTAQTQPRE-EQFNS---TFRVVSAL 297 (434)
T ss_dssp CCCSSSCCEEEECCCHHHHHSTTSCCEEEEEECCCCSSCCCCC-BCBBSSSCCBCCCSCCCCC-CCCSS---SCCCCCCE
T ss_pred CCCCcCcEEEEeCCChHHhcccCCCcEEEEEEeccccCCCCeE-EEEEeCCcccCCcccCcce-eCCCC---cEEEEEEE
Confidence 11 22222111 1 567899999999976532 122 224444320 0000000 00000 00011346
Q ss_pred EecCCCCCceEEEEEEEEecCCCCCC
Q psy12131 207 NITGLQLFTQYEASVLAKNRFGWSRP 232 (245)
Q Consensus 207 ~i~~l~~~~~y~~~v~a~N~~G~~~~ 232 (245)
.|..+...+.+.|+|.|.|..|....
T Consensus 298 ~i~~~~~~d~G~Y~C~a~n~~~~~~~ 323 (434)
T 1igy_B 298 PIMHQDWLNGKEFKCRVNSAAFPAPI 323 (434)
T ss_dssp ECCHHHHHHTCCCBCCBCCSSCSSCC
T ss_pred EECHHHccCCCcEEEEEECCCCCCce
Confidence 67766555555666669999997533
No 123
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.79 E-value=6.1e-18 Score=127.06 Aligned_cols=134 Identities=19% Similarity=0.223 Sum_probs=104.4
Q ss_pred EeecceEEEeccCCCCCEEEEEEEE-cCCCCce--eeEEEEEEe-----cCCeEEeecce-EEecCCCeEEEEEEEeecC
Q psy12131 7 LYNRESLDLDRVTLKLAGLYQCIAS-NNIGEST--SKNFIVNVI-----YPPEVSVEKQW-IHTAPDMRAEIICNVYANP 77 (245)
Q Consensus 7 ~~~~~~L~i~~~~~~d~G~Y~C~~~-~~~~~~~--~~~~~l~v~-----~~p~~~~~~~~-~~~~~g~~~~l~C~~~~~~ 77 (245)
...+..|.|.+++.+|+|.|+|.|. +..|... ...+.+.+. .+|.+...+.. ..+..|+.+.|.|.+.|.|
T Consensus 158 ~~~~~~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P 237 (315)
T 1itb_B 158 SGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQL 237 (315)
T ss_dssp EEETTEEEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEEEECT
T ss_pred eecCceEEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEEecCC
Confidence 4456679999999999999999999 6766632 345555444 56777655543 5788999999999999999
Q ss_pred CCeEEEEECCEEeccCCcEEE-----Eec-------CceeEEEEccCCCCC-CeEEEEEEEeCCceeEEEEEEEec
Q psy12131 78 PAKVEWFRDGTAITLGGRIDM-----HVS-------SEKHSLLVRHIKDTD-FGNYMCQASNNLGSSQQFIQLSGI 140 (245)
Q Consensus 78 ~~~~~w~~~~~~~~~~~~~~~-----~~~-------~~~~~l~i~~~~~~d-~g~y~C~~~n~~g~~~~~~~~~~~ 140 (245)
.|.+.|++++..+........ ... ...+.|.|.++..+| .|.|+|.|.|..|.....+.|.+.
T Consensus 238 ~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~ 313 (315)
T 1itb_B 238 SDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYP 313 (315)
T ss_dssp TSEEEEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEEEEEEECC
T ss_pred CCeeEEEECCEECCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEecCCCceeEEEEEEec
Confidence 999999999998876542211 111 123589999999999 999999999999999998888764
No 124
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.79 E-value=4.1e-18 Score=122.22 Aligned_cols=193 Identities=16% Similarity=0.230 Sum_probs=127.7
Q ss_pred cCCeEEeec----ceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEE-EEecCceeEEEEccCCCCCCeEEEE
Q psy12131 48 YPPEVSVEK----QWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRID-MHVSSEKHSLLVRHIKDTDFGNYMC 122 (245)
Q Consensus 48 ~~p~~~~~~----~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d~g~y~C 122 (245)
.+|.+...+ ....+.+|+.+.|.|.+.+.|.+.+.|++++..+.....+. .........|.|.++...|.|.|+|
T Consensus 14 ~~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 93 (231)
T 3ojm_B 14 RAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTC 93 (231)
T ss_dssp EEEEESCGGGGCCSCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEE
T ss_pred cCCccccccccCceeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEE
Confidence 356554444 56778899999999999999999999999998876543321 1112234579999999999999999
Q ss_pred EEEeCCceeEEEEEEEecCC---CCccc----cCccccCCCeeEEEEEeCCCCCceEEEEEEEeec-C-------CCCeE
Q psy12131 123 QASNNLGSSQQFIQLSGIPN---IPVFQ----KSSRRLGPDGYRLVWQVDTYSGIIQYLLKFRERE-E-------LTPWR 187 (245)
Q Consensus 123 ~~~n~~g~~~~~~~~~~~~~---~p~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~ 187 (245)
.+.|..|.....+.+.+... +|... .......+..+.|.|.+.+.++. .+ .|++... + .....
T Consensus 94 ~~~n~~~~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p-~v-~W~~~~~~~g~~~~~~~~~~~ 171 (231)
T 3ojm_B 94 VVENEYGSINHTYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQP-HI-QWIKHVEKNGSKYGPDGLPYL 171 (231)
T ss_dssp EEEETTEEEEEEEEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCC-EE-EEEEECCBTTBSBCTTSCBCE
T ss_pred EEecccCcccccEEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCC-EE-EEEECCCCCCccccCCCcceE
Confidence 99999888777666665432 22222 11234668899999999666443 23 3444211 0 01111
Q ss_pred EEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceEEecCCCCC
Q psy12131 188 NIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYVFATEGAET 245 (245)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~~t~~~~~ 245 (245)
....... ........+.|.++...+.+.|+|.|.|..|....+..+.+...+.+|
T Consensus 172 ~~~~~~~---~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~p 226 (231)
T 3ojm_B 172 KVLKHSG---INSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPKQQAP 226 (231)
T ss_dssp EEEEECS---TTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC---
T ss_pred eEecccc---cccCCccEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEecCCCCC
Confidence 1111000 000111468899999999999999999999998777788888777654
No 125
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.79 E-value=1.2e-17 Score=117.32 Aligned_cols=126 Identities=15% Similarity=0.184 Sum_probs=90.0
Q ss_pred ecceEEEeccCCCCCEEEEEEEEcCCCCce----eeEEEEEEecC---CeEEeecceEEecCCCeEEEEEEEe-ecCCCe
Q psy12131 9 NRESLDLDRVTLKLAGLYQCIASNNIGEST----SKNFIVNVIYP---PEVSVEKQWIHTAPDMRAEIICNVY-ANPPAK 80 (245)
Q Consensus 9 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~----~~~~~l~v~~~---p~~~~~~~~~~~~~g~~~~l~C~~~-~~~~~~ 80 (245)
+..+|.|.+++.+|+|.|+|.+.+..|... .+.+.|.|..+ |.+... ....|+.+.|.|.+. |.|.|.
T Consensus 63 ~~~~L~I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~~----~~~~g~~~~l~C~~~~g~P~p~ 138 (201)
T 1dr9_A 63 NNLSIVILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVKADFPTPSISDF----EIPTSNIRRIICSTSGGFPEPH 138 (201)
T ss_dssp TTTEEEECSCCGGGCEEEEEEEEECCTTSCEEEEEEEEEEEEECCCCCCEEEEE----ECSSTTEEEEEEEEEEESSCEE
T ss_pred CCcEEEEecccchhCeEEEEEEEcCCCCccccccccEEEEEEcCCCCCCceEec----cCCCCCeEEEEEecCCccCCCE
Confidence 346799999999999999999999876532 46777888765 333221 224588999999995 899999
Q ss_pred EEEEECCEEeccCCcEEEEecC-ce-eEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEE
Q psy12131 81 VEWFRDGTAITLGGRIDMHVSS-EK-HSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLS 138 (245)
Q Consensus 81 ~~w~~~~~~~~~~~~~~~~~~~-~~-~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~ 138 (245)
+.|++++..+............ .. ....+..+...|.|.|+|.|.|..|.....+++.
T Consensus 139 i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~~~ 198 (201)
T 1dr9_A 139 LSWLENGEELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFNWN 198 (201)
T ss_dssp EEEEESSCEECCSEEEEEECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEEEEC
T ss_pred EEEEECCEECccccceEEecCCCcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEEecc
Confidence 9999999887754322222111 11 1112334456799999999999999888777654
No 126
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.79 E-value=1.6e-17 Score=115.61 Aligned_cols=167 Identities=12% Similarity=0.159 Sum_probs=118.5
Q ss_pred eecceEEecCCCeEEEEEEEeecCCCeEEEEE-CCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCcee-
Q psy12131 54 VEKQWIHTAPDMRAEIICNVYANPPAKVEWFR-DGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSS- 131 (245)
Q Consensus 54 ~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~-~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~- 131 (245)
..+....+.+|+.+.|.|.+.+.|. .+.|++ ++..+....++.+...+....|.|.++..+|.|.|+|.+.|..|..
T Consensus 7 ~~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~ 85 (189)
T 2v44_A 7 ISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQ 85 (189)
T ss_dssp ESCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEE
T ss_pred ecCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCCCcE
Confidence 3455677889999999999998877 999999 7887777777777777777899999999999999999999988765
Q ss_pred EEEEEEEecCCCCcc--ccCccccCCCeeEEEEEeCCCCCceEEEEEEEeecC----CCCeEEEeeCCCCCCCcceeeeE
Q psy12131 132 QQFIQLSGIPNIPVF--QKSSRRLGPDGYRLVWQVDTYSGIIQYLLKFREREE----LTPWRNIVIPSDGSLAGPIYTQS 205 (245)
Q Consensus 132 ~~~~~~~~~~~~p~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 205 (245)
...+.+.+...|... ........++.+.|.|.+.+.++. .+ .|+++... .... ...... ..
T Consensus 86 ~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p-~v-~W~~~~~~~~~~~~~~--~~~~~~---------~~ 152 (189)
T 2v44_A 86 EATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAP-AV-SWLYHNEEVTTISDNR--FAMLAN---------NN 152 (189)
T ss_dssp EEEEEEEEECCCEEESCCCSEEEETTSCEEECCEEECSSCC-EE-EEEEEC--CEECCCTT--EEECTT---------SC
T ss_pred EEEEEEEEecCCceeecCCcEEEeCCCCEEEEEEECcCCCC-cE-EEEECCcEEeccCCCC--EEEecC---------Cc
Confidence 455555554333221 122335678899999999766543 23 35554330 0111 111111 36
Q ss_pred EEecCCCCCceEEEEEEEEecCCCCCCCc
Q psy12131 206 YNITGLQLFTQYEASVLAKNRFGWSRPSK 234 (245)
Q Consensus 206 ~~i~~l~~~~~y~~~v~a~N~~G~~~~s~ 234 (245)
+.|.++...+.+.|+|.|.|..|....+.
T Consensus 153 L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~ 181 (189)
T 2v44_A 153 LQILNINKSDEGIYRCEGRVEARGEIDFR 181 (189)
T ss_dssp EEETTCCGGGCEEEEEEEEETTTTEEEEE
T ss_pred EEEEEcCcccCeEEEEEEEccccCceeee
Confidence 88999999999999999999987654333
No 127
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.79 E-value=7e-19 Score=134.03 Aligned_cols=127 Identities=23% Similarity=0.288 Sum_probs=104.5
Q ss_pred cceEEEeccCCCCCE-EEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCE
Q psy12131 10 RESLDLDRVTLKLAG-LYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGT 88 (245)
Q Consensus 10 ~~~L~i~~~~~~d~G-~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~ 88 (245)
...|.|.+++.+|+| .|+|.|.|..|. .+..+.|.|..+|.+ ....+..|+.+.|.|.+.|.|.|.+.|++++.
T Consensus 211 ~~~L~i~~v~~~D~G~~Y~C~a~n~~g~-~~~~~~l~V~~~P~i----~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~ 285 (347)
T 2ifg_A 211 SLGLTLANVTSDLNRKNVTCWAENDVGR-AEVSVQVNVSFPASV----QLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGS 285 (347)
T ss_dssp EEEEEEESCCSTTTTCCEEECCEETTEE-CCEEECCCCBEEEEE----EECCCEESSSEEEEEEEEEESCCEEEEEETTE
T ss_pred cceEEEeeCChHHCCCeEEEEEEcCCCC-EEEEEEEEEcCCCee----eeccCccCceEEEEEEeeecCCCcEEEEeCCE
Confidence 456999999999999 999999999877 577888888888886 11223468999999999999999999999999
Q ss_pred EeccCCcEEEEec-------CceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEecC
Q psy12131 89 AITLGGRIDMHVS-------SEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIP 141 (245)
Q Consensus 89 ~~~~~~~~~~~~~-------~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~ 141 (245)
.+........... .....|.|.++...|.|.|+|.|.|..|.....+.+.+..
T Consensus 286 ~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 345 (347)
T 2ifg_A 286 VLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMD 345 (347)
T ss_dssp ECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEECSCC
T ss_pred ECCCCcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCceeeEEEEEecC
Confidence 8886554333211 1256799999999999999999999999999988887764
No 128
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.79 E-value=3e-18 Score=122.93 Aligned_cols=137 Identities=22% Similarity=0.427 Sum_probs=103.9
Q ss_pred EEEeecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCC----eEEe-ecceEEecCCCeEEEEEEEeecCCC
Q psy12131 5 ELLYNRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPP----EVSV-EKQWIHTAPDMRAEIICNVYANPPA 79 (245)
Q Consensus 5 ~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p----~~~~-~~~~~~~~~g~~~~l~C~~~~~~~~ 79 (245)
....+...|.|.+++.+|+|.|+|.+.+..+. ....+.|.|..++ .+.. .+....+..|+.+.|.|.+.+.|.+
T Consensus 70 ~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~-~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p 148 (231)
T 3ojm_B 70 KVRNQHWSLIMESVVPSDKGNYTCVVENEYGS-INHTYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQP 148 (231)
T ss_dssp EEEGGGTEEEECSCCGGGCEEEEEEEEETTEE-EEEEEEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCC
T ss_pred eeecCcceEEEecCCcccCEEEEEEEecccCc-ccccEEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCC
Confidence 44455667999999999999999999998776 5777888887532 2222 2345677899999999999999999
Q ss_pred eEEEEE----CCEEeccCCcE--EEEe-----cCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEecCC
Q psy12131 80 KVEWFR----DGTAITLGGRI--DMHV-----SSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIPN 142 (245)
Q Consensus 80 ~~~w~~----~~~~~~~~~~~--~~~~-----~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~~ 142 (245)
.+.|++ ++..+...... .... ......|.|.++...|.|.|+|.+.|..|.....+.+.+...
T Consensus 149 ~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 222 (231)
T 3ojm_B 149 HIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPK 222 (231)
T ss_dssp EEEEEEECCBTTBSBCTTSCBCEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred EEEEEECCCCCCccccCCCcceEeEecccccccCCccEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEecC
Confidence 999999 77666543321 1111 112357999999999999999999999998888777766533
No 129
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.79 E-value=2.8e-18 Score=107.80 Aligned_cols=94 Identities=24% Similarity=0.438 Sum_probs=84.1
Q ss_pred cCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeC
Q psy12131 48 YPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNN 127 (245)
Q Consensus 48 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 127 (245)
.||.|...+..+.+.+|+.+.|.|.+.|.|.|.+.|++++..+....++.+...+....|.|.++..+|.|.|+|.|.|.
T Consensus 12 ~pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 91 (107)
T 3knb_B 12 SPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNA 91 (107)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEEC
Confidence 36777777778889999999999999999999999999999998888888777777889999999999999999999999
Q ss_pred CceeEEEEEEEecC
Q psy12131 128 LGSSQQFIQLSGIP 141 (245)
Q Consensus 128 ~g~~~~~~~~~~~~ 141 (245)
.|.....+.|.+..
T Consensus 92 ~G~~~~~~~l~V~~ 105 (107)
T 3knb_B 92 AGEAYAAAAVTVLE 105 (107)
T ss_dssp TEEEEEEEEEEEEC
T ss_pred CCEEEEEEEEEEEc
Confidence 99988888877653
No 130
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.79 E-value=2.8e-18 Score=120.22 Aligned_cols=178 Identities=12% Similarity=0.100 Sum_probs=117.7
Q ss_pred CCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCC
Q psy12131 49 PPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNL 128 (245)
Q Consensus 49 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 128 (245)
+|.+...+.. .+.+|+.+.|.|.+.+ +.+.+.|++++..+.... ...........|.|.++..+|.|.|.|.+.|..
T Consensus 5 ~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~-~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 81 (196)
T 3p2t_A 5 KPTLWAEPGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDR-QNPLEPKNKARFSIPSMTEDYAGRYRCYYRSPV 81 (196)
T ss_dssp CCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEE-ECCCSSSSEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCEEEccCCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCcccc-cccccCCceEEEEeccCCcccCceEEEEEeCCC
Confidence 5677666665 6789999999999987 678999999987654311 111112345789999999999999999999998
Q ss_pred ce--eEEEEEEEe--cCCCCccccC--ccccCCCeeEEEEEeCCCCCceEEEEEEEeecCC--CCeEEEeeCCCCCCCcc
Q psy12131 129 GS--SQQFIQLSG--IPNIPVFQKS--SRRLGPDGYRLVWQVDTYSGIIQYLLKFREREEL--TPWRNIVIPSDGSLAGP 200 (245)
Q Consensus 129 g~--~~~~~~~~~--~~~~p~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 200 (245)
|. ....+.+.+ .+.+|.+... ..+..++.++|.|.+.+.++ .| .|+++.... ........ ..
T Consensus 82 g~~~~s~~~~l~V~~~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~~--~~-~w~k~g~~~~~~~~~~~~~-------~~ 151 (196)
T 3p2t_A 82 GWSQPSDPLELVMTGAYSKPTLSALPSPLVTSGKSVTLLCQSRSPMD--TF-LLCKERAAHPLLCLRSEHG-------AQ 151 (196)
T ss_dssp EEBCCCCCEEEEEECSSCCCEEEEESCSEECTTCCEEEEEEEEEEEE--EE-EEEETTCCCGGGSEEEEEE-------EE
T ss_pred cccCCCccEEEEecCCCCCCEEEeCCcceecCCCeEEEEEecCCCCC--EE-EEEeCCCcccceeeccccc-------cc
Confidence 73 233344444 3344443322 23567899999999865422 33 355553311 11110000 00
Q ss_pred eeeeEEEecCCCCCceEEEEEEEEecCC---CCCCCcceEEe
Q psy12131 201 IYTQSYNITGLQLFTQYEASVLAKNRFG---WSRPSKAYVFA 239 (245)
Q Consensus 201 ~~~~~~~i~~l~~~~~y~~~v~a~N~~G---~~~~s~~~~~~ 239 (245)
.....|.|.++...+.+.|+|.|.|..+ .+..|..+.+.
T Consensus 152 ~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~s~~S~~~~l~ 193 (196)
T 3p2t_A 152 QHQAEFPMSPVTSVHGGTYRCFSSHGFSHYLLSHPSDPLELI 193 (196)
T ss_dssp EEEEEEEECSCCGGGCEEEEEEEECGGGTTEECCCCCCEEEE
T ss_pred CcceEEEeCCCcccCCCeEEEEEEcCCCCcccCCCCCCEEEE
Confidence 1226789999999999999999999987 36667766654
No 131
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.79 E-value=1.4e-18 Score=122.46 Aligned_cols=120 Identities=16% Similarity=0.219 Sum_probs=93.4
Q ss_pred ecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeec-CCCeEEEEECC
Q psy12131 9 NRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYAN-PPAKVEWFRDG 87 (245)
Q Consensus 9 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~~~w~~~~ 87 (245)
....|.|.+++.+|+|.|+|.+.|. . .+..+.|.|..+|.+...+. ..+.+|+.+.|.|.+.+. |.+.+.|++++
T Consensus 52 ~~~~L~i~~v~~~D~G~Y~C~a~n~--~-~s~~~~l~V~~~p~~~~~~~-~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g 127 (204)
T 3sgj_C 52 QASSYFIDAATVDDSGEYRCQTQLS--T-LSDPVQLEVHIGWLLLQAPR-WVFKEEDPIHLRCHSWKNTALHKVTYLQNG 127 (204)
T ss_dssp CSSEEEESSCCGGGCEEEEEEETTS--B-CCCCEEEEEECSSEEEECSC-SEEETTCCEEEEEEEGGGCCCEEEEEEETT
T ss_pred CccEEEEecccccCCEEEEEEeCCC--c-ccccEEEEEecCceEecCCc-eeEeCCCcEEEEEEecCCCCCceEEEEECC
Confidence 3467999999999999999999873 2 56678889988887666554 557789999999999665 55799999999
Q ss_pred EEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCC-ceeEEEEEEEec
Q psy12131 88 TAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNL-GSSQQFIQLSGI 140 (245)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~-g~~~~~~~~~~~ 140 (245)
..+... .....|.|.++..+|.|.|+|.+.|.. +.....+.|.+.
T Consensus 128 ~~~~~~--------~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~V~ 173 (204)
T 3sgj_C 128 KGRKYF--------HHNSDFYIPKATLKDSGSYFCRGLVGSKNVSSETVQITIT 173 (204)
T ss_dssp EEEEEE--------EECCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred cEeecc--------cCCceEEECcCCcccCEEEEEEEEeCCCceecCcEEEEEe
Confidence 875421 123479999999999999999999944 444445555554
No 132
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.79 E-value=5.1e-18 Score=119.07 Aligned_cols=119 Identities=13% Similarity=0.171 Sum_probs=86.7
Q ss_pred ecceEEEeccCCCCCEEEEEEEEcCC-CC-ceeeEEEEEEec---CCeEEeecceEEecCCCeEEEEEEEeecCCCeEEE
Q psy12131 9 NRESLDLDRVTLKLAGLYQCIASNNI-GE-STSKNFIVNVIY---PPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEW 83 (245)
Q Consensus 9 ~~~~L~i~~~~~~d~G~Y~C~~~~~~-~~-~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w 83 (245)
....|.|.+++.+|+|.|+|.+.|.. |. ..+..+.|.|.. +|.+...+. ..+.+|+.+.|.|.+.+. .+.+.|
T Consensus 56 ~~~~L~i~~v~~~D~G~Y~C~a~n~~~g~~~~s~~~~l~V~~~~~~p~i~~~~~-~~v~~G~~v~L~C~~~~~-~~~v~W 133 (198)
T 1ugn_A 56 KKGQFPIPSITWEHTGRYRCYYGSDTAGRSESSDPLELVVTGAYIKPTLSAQPS-PVVNSGGNVTLQCDSQVA-FDGFIL 133 (198)
T ss_dssp TTTEEEESSCCGGGCEEEEEEEEETTTEECCCCCCEEEEEECSSCCCEEEEESC-SEEETTCCEEEEEECSSC-CSEEEE
T ss_pred cccEEEECCCCHHHCeEEEEEEECCCCCcccCCccEEEEEcccccCCccccCCc-cccCCCCcEEEEEecCCC-CcEEEE
Confidence 34679999999999999999999976 42 246778888886 456555443 457799999999999887 789999
Q ss_pred EECCEEeccCCc-EEE-EecCceeEEEEccCCCCCCeEEEEEEEeCCc
Q psy12131 84 FRDGTAITLGGR-IDM-HVSSEKHSLLVRHIKDTDFGNYMCQASNNLG 129 (245)
Q Consensus 84 ~~~~~~~~~~~~-~~~-~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g 129 (245)
++++..+..... +.. ...+....|.|.++..+|.|.|+|.|.|..+
T Consensus 134 ~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 181 (198)
T 1ugn_A 134 CKEGEDEHPQCLNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDSNS 181 (198)
T ss_dssp EEC------CEEEC------CCEEEEEECCCCTTSCEEEEEEEECTTS
T ss_pred EECCCccCCccccccccCCCcceeEEEecccCcccCeEEEEEEEeCCC
Confidence 999887643221 111 1122357899999999999999999999864
No 133
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.79 E-value=1.5e-18 Score=122.97 Aligned_cols=126 Identities=20% Similarity=0.363 Sum_probs=97.2
Q ss_pred EEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEec-CCeEEeecceEEecCCCeEEEEEEE-eecCCCeEEEEECCEEe
Q psy12131 13 LDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIY-PPEVSVEKQWIHTAPDMRAEIICNV-YANPPAKVEWFRDGTAI 90 (245)
Q Consensus 13 L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~-~p~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~~~w~~~~~~~ 90 (245)
|.|.+++.+|+|.|+|.+.+..|...+..+.|.|.. +|.+...+....+..|+.+.|.|.+ .+.|.+.+.|++++..+
T Consensus 74 l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l 153 (212)
T 2v9r_A 74 IVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPL 153 (212)
T ss_dssp CCCCSSCCCSCEEEEEEEEETTEEEECCCEEEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEE
T ss_pred EEecCCCcccCeEEEEEEECCCCceeecceEEEEEeccccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccC
Confidence 444567999999999999998776445677777775 4444455556678899999999998 89999999999999988
Q ss_pred ccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEE-EEEEEecC
Q psy12131 91 TLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQ-FIQLSGIP 141 (245)
Q Consensus 91 ~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~-~~~~~~~~ 141 (245)
.......... ...|.|.++..+|.|.|+|.+.|..|.... .+.|.+..
T Consensus 154 ~~~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~ 202 (212)
T 2v9r_A 154 DDKDERITIR---GGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLE 202 (212)
T ss_dssp CTTSTTEEEE---TTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred CCCcceEEcc---CCeEEEeeCCHhhCeeEEEEEecccCceecceEEEEEEe
Confidence 7544322222 237999999999999999999999987654 35666553
No 134
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.79 E-value=1.5e-17 Score=115.88 Aligned_cols=173 Identities=12% Similarity=0.116 Sum_probs=118.3
Q ss_pred CCeEEeecceEEecCCCeEEEEEEEeecC-CCeEEEEE-CCEEec-cCCcEEEEe-cCceeEEEEccCCCCCCeEEEEEE
Q psy12131 49 PPEVSVEKQWIHTAPDMRAEIICNVYANP-PAKVEWFR-DGTAIT-LGGRIDMHV-SSEKHSLLVRHIKDTDFGNYMCQA 124 (245)
Q Consensus 49 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~-~~~~~w~~-~~~~~~-~~~~~~~~~-~~~~~~l~i~~~~~~d~g~y~C~~ 124 (245)
++.+...+....+.+|+.+.|.|.+.+.+ .+.+.|++ ++..+. ...++.+.. ......|.|.++..+|.|.|.|.+
T Consensus 2 p~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 81 (191)
T 1epf_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVV 81 (191)
T ss_dssp -CCEEEESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred ceEEEecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEE
Confidence 34556667777889999999999999876 78999999 887776 344554432 345679999999999999999999
Q ss_pred EeCC-ceeEEEEEEEecCCCCcccc--CccccCCCeeEEEEEeCCCCCceEEEEEEEeec-C-CCCeEEEeeCCCCCCCc
Q psy12131 125 SNNL-GSSQQFIQLSGIPNIPVFQK--SSRRLGPDGYRLVWQVDTYSGIIQYLLKFRERE-E-LTPWRNIVIPSDGSLAG 199 (245)
Q Consensus 125 ~n~~-g~~~~~~~~~~~~~~p~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~ 199 (245)
.|.. +.....+.+.+...|..... ......++.+.|.|.+.+.++.. ..|+++.. . ...-..+.....
T Consensus 82 ~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~--v~W~~~~~~~~~~~~~~~~~~~~----- 154 (191)
T 1epf_A 82 TAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPT--IIWKHKGRDVILKKDVRFIVLSN----- 154 (191)
T ss_dssp EETTTEEEEEEEEEEEECCSEEEECCSSEECCTTSCEEECCEEECSSCCE--EEEEETTEEGGGGCCTTEEECTT-----
T ss_pred EcCCCcceEEEEEEEeecCceEecCCCcEeecCCCeEEEEEEECCCCCCE--EEEEECCEEeeccCCceEEEecC-----
Confidence 9987 55566666666543322111 22346788999999997665443 33555433 0 000001111111
Q ss_pred ceeeeEEEecCCCCCceEEEEEEEEecCCCCCC
Q psy12131 200 PIYTQSYNITGLQLFTQYEASVLAKNRFGWSRP 232 (245)
Q Consensus 200 ~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~ 232 (245)
..+.|.++...+.+.|+|.|.|..|....
T Consensus 155 ----~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 183 (191)
T 1epf_A 155 ----NYLQIRGIKKTDEGTYRCEGRILARGEIN 183 (191)
T ss_dssp ----SCEEETTCCGGGCEEEEEEEEEGGGTEEE
T ss_pred ----CeEEECCCChhhCEEEEEEEEEecceeEE
Confidence 35889999999999999999999865433
No 135
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.79 E-value=1.8e-18 Score=121.73 Aligned_cols=121 Identities=11% Similarity=0.147 Sum_probs=88.6
Q ss_pred ecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCC---CeEEEEE
Q psy12131 9 NRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPP---AKVEWFR 85 (245)
Q Consensus 9 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~---~~~~w~~ 85 (245)
....|.|.+++.+|+|.|+|.|.|..+. .++.+.|.|..+|..........+.+|+.+.|.|.+.+.++ +.+.|++
T Consensus 52 ~~~~L~I~~v~~~D~G~Y~C~a~n~~~~-~~~~~~l~V~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k 130 (202)
T 1vca_A 52 TTSTLTMNPVSFGNEHSYLCTATCESRK-LEKGIQVEIYSFPKDPEIHLSGPLEAGKPITVKCSVADVYPFDRLEIDLLK 130 (202)
T ss_dssp TEEEEEESSCCGGGCSEEEEEEEETTEE-EEEEEEEEEEBCCSCCEEEESSCEETTSCEEEEEEEEEEBSGGGEEEEEEE
T ss_pred CccEEEECcCCHHHCEEEEEEEEECCce-EeeEEEEEEEeCCCCCEeCCceEEcCCCCEEEEEEECCcCCCCCeEEEEEe
Confidence 3456999999999999999999998776 67789999988765332222245779999999999988643 3799999
Q ss_pred CCEEeccCCcEEEE----ecCceeEEEEccCCCCCCeEEEEEEEeCCce
Q psy12131 86 DGTAITLGGRIDMH----VSSEKHSLLVRHIKDTDFGNYMCQASNNLGS 130 (245)
Q Consensus 86 ~~~~~~~~~~~~~~----~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~ 130 (245)
++..+......... .......|.|.....+|.|.|+|.|.|..+.
T Consensus 131 ~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~~~d~~g~ytC~A~n~~~~ 179 (202)
T 1vca_A 131 GDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLVCRAKLHIDE 179 (202)
T ss_dssp TTEEEEEEECCSCCSSCCCEEEEEEEEECCCGGGTTCEEEEEEEECSCC
T ss_pred CCeECcccccccccCcCcceEEEEEEEEEeeeccCCCeEEEEEEccccC
Confidence 99876532100000 0012345678888888899999999998765
No 136
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.79 E-value=1.3e-18 Score=123.77 Aligned_cols=121 Identities=22% Similarity=0.400 Sum_probs=96.3
Q ss_pred EEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEec-CCeEEeecceEEecCCCeEEEEEEE-eecCCCeEEEEECCEEec
Q psy12131 14 DLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIY-PPEVSVEKQWIHTAPDMRAEIICNV-YANPPAKVEWFRDGTAIT 91 (245)
Q Consensus 14 ~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~-~p~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~~~w~~~~~~~~ 91 (245)
.|.+++.+|+|.|+|.+.|..|...+..+.|.|.. +|.+...+....+..|+.+.|.|.+ .+.|.+.+.|++++..+.
T Consensus 72 ~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~ 151 (217)
T 2vr9_A 72 TMQGKKEQDGGEYWCVAKNRVGQAVSRHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLD 151 (217)
T ss_dssp CCBSSSCBCCEEEEEEEEETTEEEECCCEEEEECEECCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEEC
T ss_pred EeccCCcccCceEEEEEecCCCccccccceEEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCC
Confidence 68899999999999999998776445566777765 5556566667778899999999999 899999999999998887
Q ss_pred cC--------CcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEE
Q psy12131 92 LG--------GRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 137 (245)
Q Consensus 92 ~~--------~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~ 137 (245)
.. .++... ....|.|.++..+|.|.|+|.+.|..|.......+
T Consensus 152 ~~~~~~~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~ 202 (217)
T 2vr9_A 152 DLKAMSFGASSRVRIV---DGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAK 202 (217)
T ss_dssp CCCCC---CCCSEEEE---TTTEEEESSCCSTTCEEEEEEEEETTEEEECCCEE
T ss_pred cccccccccCCcEEec---CCCcEEEeeCCHHHCeEEEEEEEcccceeccccEE
Confidence 32 233332 22379999999999999999999999987664433
No 137
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.79 E-value=5.2e-18 Score=119.52 Aligned_cols=167 Identities=13% Similarity=0.106 Sum_probs=112.5
Q ss_pred CCeEEeecceEEecCCCeEEEEEEEeecCCCe-EEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeC
Q psy12131 49 PPEVSVEKQWIHTAPDMRAEIICNVYANPPAK-VEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNN 127 (245)
Q Consensus 49 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~-~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 127 (245)
+|.+...+....+.+|+.+.|.|.+.+.|.+. +.|++++..+.... ..|.|.++..+|.|.|+|.+.|.
T Consensus 7 ~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~~----------~~L~i~~v~~~D~G~Y~C~a~n~ 76 (204)
T 3sgj_C 7 KAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQA----------SSYFIDAATVDDSGEYRCQTQLS 76 (204)
T ss_dssp BCEEEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCCS----------SEEEESSCCGGGCEEEEEEETTS
T ss_pred CCeEEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccCc----------cEEEEecccccCCEEEEEEeCCC
Confidence 46666666656788999999999999988775 99999998876542 47999999999999999999986
Q ss_pred CceeEEEEEEEecCCCCcccc-CccccCCCeeEEEEEeCCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEE
Q psy12131 128 LGSSQQFIQLSGIPNIPVFQK-SSRRLGPDGYRLVWQVDTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSY 206 (245)
Q Consensus 128 ~g~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (245)
.......+.+.. .++.... ......++.+.|.|.+.++.|...+. |+++.. .. .... . ...+
T Consensus 77 ~~s~~~~l~V~~--~p~~~~~~~~~v~~G~~v~L~C~~~~~~p~~~v~-W~k~g~---~~-~~~~-~---------~~~L 139 (204)
T 3sgj_C 77 TLSDPVQLEVHI--GWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVT-YLQNGK---GR-KYFH-H---------NSDF 139 (204)
T ss_dssp BCCCCEEEEEEC--SSEEEECSCSEEETTCCEEEEEEEGGGCCCEEEE-EEETTE---EE-EEEE-E---------CCCE
T ss_pred cccccEEEEEec--CceEecCCceeEeCCCcEEEEEEecCCCCCceEE-EEECCc---Ee-eccc-C---------CceE
Confidence 554444444442 2222211 13345789999999996655543343 455432 11 1111 1 1468
Q ss_pred EecCCCCCceEEEEEEEEecCC-CCCCCcceEEecCC
Q psy12131 207 NITGLQLFTQYEASVLAKNRFG-WSRPSKAYVFATEG 242 (245)
Q Consensus 207 ~i~~l~~~~~y~~~v~a~N~~G-~~~~s~~~~~~t~~ 242 (245)
.|.++...+.+.|+|.|.|..| ....+..+.+...+
T Consensus 140 ~i~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~V~~~~ 176 (204)
T 3sgj_C 140 YIPKATLKDSGSYFCRGLVGSKNVSSETVQITITQGL 176 (204)
T ss_dssp EESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred EECcCCcccCEEEEEEEEeCCCceecCcEEEEEeCcC
Confidence 8999999999999999999543 33333445554433
No 138
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.78 E-value=5e-18 Score=120.41 Aligned_cols=134 Identities=16% Similarity=0.236 Sum_probs=98.7
Q ss_pred ceEEEe--ecceEEEeccCCCCCEEEEEEEEcCCCC--ceeeEEEEEEe----cCCeEEeecceEEecCCCeEEEEEEEe
Q psy12131 3 EIELLY--NRESLDLDRVTLKLAGLYQCIASNNIGE--STSKNFIVNVI----YPPEVSVEKQWIHTAPDMRAEIICNVY 74 (245)
Q Consensus 3 ~~~~~~--~~~~L~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~ 74 (245)
|+.+.. +..+|.|.+++.+|+|.|+|.+.+..+. .....+.|.|. .+|.+...+....+..|+.+.|.|.+.
T Consensus 60 r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~ 139 (213)
T 3mj8_L 60 HFSGSNSGNMATLTISKAQAGDEADYYCQSWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVCMIN 139 (213)
T ss_dssp TEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTTTEEEEBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEEEEE
T ss_pred cEEEEecCCEEEEEECCCChhhCEEEEEEeccCCcceeEEcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEEEEee
Confidence 555443 3356999999999999999999998772 34667788888 677777666544555899999999999
Q ss_pred ec-CC-CeEEEEECCEEeccCCcEE--EEecC---ceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEE
Q psy12131 75 AN-PP-AKVEWFRDGTAITLGGRID--MHVSS---EKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQ 136 (245)
Q Consensus 75 ~~-~~-~~~~w~~~~~~~~~~~~~~--~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 136 (245)
+. |+ +.+.|++++..+....... ....+ ..+.|.|..+..+|.|.|+|.|.|..+...+.+.
T Consensus 140 g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~ 208 (213)
T 3mj8_L 140 GFYPADVAVTWEADGTPITQGVKTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEKSLS 208 (213)
T ss_dssp EEBSSCCEEEEEETTEEECTTEEECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEEEEC
T ss_pred ceeCCCeEEEEEcCCcccCCCcccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEeeec
Confidence 85 33 3999999999876431100 00111 1246889999999999999999999877666553
No 139
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.78 E-value=2.4e-17 Score=113.96 Aligned_cols=173 Identities=15% Similarity=0.184 Sum_probs=113.2
Q ss_pred CCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCc--eeEEEEccCCCCCCeEEEEEEEe
Q psy12131 49 PPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSE--KHSLLVRHIKDTDFGNYMCQASN 126 (245)
Q Consensus 49 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~--~~~l~i~~~~~~d~g~y~C~~~n 126 (245)
+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.......+..... ...|.|.++...|.|.|.|.+.|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 81 (182)
T 1rhf_A 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVED 81 (182)
T ss_dssp -----CCCEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESS
T ss_pred CCEEEeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEc
Confidence 3555566667888999999999999998999999999999887665544433222 46899999999999999999999
Q ss_pred CCce-eEEEEEEEecCCCCccccC---ccccCCCeeEEEEEeCCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCccee
Q psy12131 127 NLGS-SQQFIQLSGIPNIPVFQKS---SRRLGPDGYRLVWQVDTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIY 202 (245)
Q Consensus 127 ~~g~-~~~~~~~~~~~~~p~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (245)
..|. ....+.+.+.. +|.+... .....++.+.|.|.+.+.++...+. |+++...-..... .
T Consensus 82 ~~~~~~~~~~~l~V~~-~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~-W~~~~~~~~~~~~-------------~ 146 (182)
T 1rhf_A 82 GGETEISQPVWLTVEG-VPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIV-WWRGTTKIGGPAP-------------S 146 (182)
T ss_dssp CTTCEECCCEEEEEEC-SCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEE-EEETTEECSCSEE-------------S
T ss_pred CCCcEEEEEEEEEEec-CCeEEecCcceEecCCCEEEEEeEecCCCCCCEEE-EEcCCeECCCCCC-------------C
Confidence 8664 33445555443 2332221 2356788999999997665432333 4444320000000 1
Q ss_pred eeEEEecCCCCCceEEEEEEEEecCCCCCC-CcceEE
Q psy12131 203 TQSYNITGLQLFTQYEASVLAKNRFGWSRP-SKAYVF 238 (245)
Q Consensus 203 ~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~-s~~~~~ 238 (245)
...+.|.++.+. +.|+|.|.|..|.... +..+.+
T Consensus 147 ~~~L~i~~~~d~--G~Y~C~a~N~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 147 PSVLNVTGVTQS--TMFSCEAHNLKGLASSRTATVHL 181 (182)
T ss_dssp SEEEEECCCSSC--EEEEEEEEETTEEEECCCEEEEE
T ss_pred ceEEEEeccccC--eEEEEEEECCCCCcccceEEEEe
Confidence 267888888655 5566669999997743 444443
No 140
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.78 E-value=2.9e-17 Score=124.19 Aligned_cols=129 Identities=17% Similarity=0.228 Sum_probs=100.4
Q ss_pred cceEEEeccCCCCCEEEEEEEEcC--CCCc---eeeEEEEEEecCC----eEEeecceEEecCCCeEEEEEEEeecC---
Q psy12131 10 RESLDLDRVTLKLAGLYQCIASNN--IGES---TSKNFIVNVIYPP----EVSVEKQWIHTAPDMRAEIICNVYANP--- 77 (245)
Q Consensus 10 ~~~L~i~~~~~~d~G~Y~C~~~~~--~~~~---~~~~~~l~v~~~p----~~~~~~~~~~~~~g~~~~l~C~~~~~~--- 77 (245)
+..|.|.+++.+|+|.|+|.|.|. .|.. .+..+.|.|..+| .+. .+....+..|+.+.|.|.+.+.|
T Consensus 181 ~~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~-~~~~~~v~~G~~~~l~C~~~g~p~~~ 259 (329)
T 3oq3_B 181 GQNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLI-LDPKINVTIGEPANITCTAVSTSLLV 259 (329)
T ss_dssp TTEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEE-CCSEEEECTTSCEEEEEEEEETTCCT
T ss_pred CCEEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCcee-cCCeeEEecCCCEEEEEEEEECCCCC
Confidence 577999999999999999999986 5442 2344778888776 333 55667888999999999999998
Q ss_pred CC-eEEEEECCEEe-ccCCcEEEE--ecC--ceeEEEEccCCCCCCe-EEEEEEEeCCceeEEEEEEEe
Q psy12131 78 PA-KVEWFRDGTAI-TLGGRIDMH--VSS--EKHSLLVRHIKDTDFG-NYMCQASNNLGSSQQFIQLSG 139 (245)
Q Consensus 78 ~~-~~~w~~~~~~~-~~~~~~~~~--~~~--~~~~l~i~~~~~~d~g-~y~C~~~n~~g~~~~~~~~~~ 139 (245)
.+ .+.|++++..+ ......... ..+ ....|.|.++..+|.| .|+|.|.|..|.....+.|.+
T Consensus 260 ~~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~~~~~~~l~v 328 (329)
T 3oq3_B 260 DDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKTLTTTVVL 328 (329)
T ss_dssp TCCEEEEECTTSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECSSCEEEEEEEEEE
T ss_pred CCcEEEEEECCeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEecCCceEEEEEEEe
Confidence 67 89999998774 333322211 111 3568999999999999 999999999999888777664
No 141
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.78 E-value=1.2e-17 Score=116.63 Aligned_cols=120 Identities=15% Similarity=0.223 Sum_probs=86.7
Q ss_pred cceEEEeecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCe---EEeecceEEecCCC-eEEEEEEEeec-
Q psy12131 2 KEIELLYNRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPE---VSVEKQWIHTAPDM-RAEIICNVYAN- 76 (245)
Q Consensus 2 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~---~~~~~~~~~~~~g~-~~~l~C~~~~~- 76 (245)
+|+.+.. +.+|+|.+++.+|+|.|+|.+.+..+. ....+.|.|..+|. +.... .....|. .+.|.|.+.+.
T Consensus 62 ~R~~~~~-~~sL~I~~v~~~D~G~Y~C~~~~~~~~-~~~~~~L~V~~~~~~p~i~~~~--~~~~~g~~~v~L~C~~~g~~ 137 (193)
T 2if7_A 62 KRLNFTQ-SYSLQLSNLKMEDTGSYRAQISTKTSA-KLSSYTLRILRQLRNIQVTNHS--QLFQNMTCELHLTCSVEDAD 137 (193)
T ss_dssp TTEEECT-TCCEEECSCCGGGCEEEEEEEECSSCE-EEEEEEEEEECCCEEEEEEECC--C---CSSEEEEEEEEEESCC
T ss_pred ccEEECC-CeEEEECCCCcccCceEEEEEEecCCC-eEEEEEEEEEccCCCCeEecCc--eeecCCCceEEEEEEEecCC
Confidence 3666663 566999999999999999999998776 45688888886543 22222 1123455 89999999985
Q ss_pred CCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCC-CCeEEEEEEEeCCceeEEEEE
Q psy12131 77 PPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDT-DFGNYMCQASNNLGSSQQFIQ 136 (245)
Q Consensus 77 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~-d~g~y~C~~~n~~g~~~~~~~ 136 (245)
|.|.+.|++++..+.... .|.|...... |.|.|+|.|.|..|.....+.
T Consensus 138 p~p~i~W~~~g~~l~~~~-----------~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~~~~ 187 (193)
T 2if7_A 138 DNVSFRWEALGNTLSSQP-----------NLTVSWDPRISSEQDYTCIAENAVSNLSFSVS 187 (193)
T ss_dssp TTCEEEEEETTEEEESSS-----------EEEEEECTTTCSCCEEEEEEEETTEEEEEEEE
T ss_pred CceEEEEEeCCEEcCCCC-----------eEEEEeccCcCCCCcEEEEEECCCCccccccc
Confidence 478999999988654322 3555444443 899999999999988755443
No 142
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.78 E-value=9.2e-18 Score=118.89 Aligned_cols=169 Identities=17% Similarity=0.190 Sum_probs=120.6
Q ss_pred cCCCeEEEEEEEeec-CCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEec
Q psy12131 62 APDMRAEIICNVYAN-PPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGI 140 (245)
Q Consensus 62 ~~g~~~~l~C~~~~~-~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~ 140 (245)
-.++.+.|.|.+.+. |.+.+.|++++..+....++.+...+....|.|.++..+|.|.|+|.+.|..|.....+.+.+.
T Consensus 15 c~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v~ 94 (212)
T 2r15_A 15 STAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQ 94 (212)
T ss_dssp ECSSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHH
T ss_pred EcCceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEEe
Confidence 367788899998875 4789999999999988888877777777889999999999999999999998887777777543
Q ss_pred C--------------------CCCcccc---CccccCCCeeEEEEEeCCCCCceEEEEEEEeec--CCCCeEEEeeCCCC
Q psy12131 141 P--------------------NIPVFQK---SSRRLGPDGYRLVWQVDTYSGIIQYLLKFRERE--ELTPWRNIVIPSDG 195 (245)
Q Consensus 141 ~--------------------~~p~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 195 (245)
. .|+.... ......+..+.|.|.+.+.++.. ..|+++.. .......+......
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~--v~W~~~~~~~~~~~~~~~~~~~~~ 172 (212)
T 2r15_A 95 AYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPE--VSWLKNEKALAQTDHCNLKFEAGR 172 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCE--EEEEETTEEECCCSSEEEEEETTT
T ss_pred eccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCce--EEEEECCeECccCCCEEEEEcCCC
Confidence 1 2222221 12356788999999997765432 33555433 11111122211111
Q ss_pred CCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceEEe
Q psy12131 196 SLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYVFA 239 (245)
Q Consensus 196 ~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~~ 239 (245)
...+.|.++...+.+.|+|.|.|..|....+..+.+.
T Consensus 173 -------~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 209 (212)
T 2r15_A 173 -------TAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVF 209 (212)
T ss_dssp -------EEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred -------EEEEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEEE
Confidence 2578999999999999999999999987665555554
No 143
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.78 E-value=2.2e-19 Score=136.85 Aligned_cols=143 Identities=17% Similarity=0.358 Sum_probs=76.6
Q ss_pred eEEEeecceEEEeccCCCCCEEEEEEEEcCC-CCc--eeeEEEEEEec------CCeEEeecceE--EecCCCeEEEEEE
Q psy12131 4 IELLYNRESLDLDRVTLKLAGLYQCIASNNI-GES--TSKNFIVNVIY------PPEVSVEKQWI--HTAPDMRAEIICN 72 (245)
Q Consensus 4 ~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~-~~~--~~~~~~l~v~~------~p~~~~~~~~~--~~~~g~~~~l~C~ 72 (245)
..+..++..|.|.+++.+|+|.|+|.|.|.. |.. .++.+.|.|.. +|.+..++... .+..|+.+.|.|.
T Consensus 170 ~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~ 249 (349)
T 4dep_C 170 NNVIPEGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCT 249 (349)
T ss_dssp SSEEEETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC----------------CCCEE
T ss_pred cceeecCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEEEEEE
Confidence 3445566789999999999999999999986 432 36777788876 56665544322 6778999999999
Q ss_pred Ee----ecCCCeEEEEECCEEecc-CCcEEEEe-------cC--ceeEEEEccCCCCCC-eEEEEEEEeCCceeEEEEEE
Q psy12131 73 VY----ANPPAKVEWFRDGTAITL-GGRIDMHV-------SS--EKHSLLVRHIKDTDF-GNYMCQASNNLGSSQQFIQL 137 (245)
Q Consensus 73 ~~----~~~~~~~~w~~~~~~~~~-~~~~~~~~-------~~--~~~~l~i~~~~~~d~-g~y~C~~~n~~g~~~~~~~~ 137 (245)
+. +.|.|.+.|++++..+.. ..++.+.. .+ ..+.|.|.++..+|. |.|+|.|.|..|.....+.|
T Consensus 250 ~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l 329 (349)
T 4dep_C 250 VYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKV 329 (349)
T ss_dssp EEECCCTTCCCEEEEESSCC--------CCCCEEEECCTTCCEEEEECC-------------CEEEEECSSCEEEEECC-
T ss_pred EEEccCCCCCCEEEEEECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHHHcCCcEEEEEEcCCCcEEEEEEE
Confidence 98 468889999999887665 22211100 00 134599999999999 99999999999998888888
Q ss_pred EecCCCCcc
Q psy12131 138 SGIPNIPVF 146 (245)
Q Consensus 138 ~~~~~~p~~ 146 (245)
.+...+|.+
T Consensus 330 ~v~~~~p~~ 338 (349)
T 4dep_C 330 KQKVPAPRY 338 (349)
T ss_dssp ---------
T ss_pred eeecCCCCC
Confidence 776444433
No 144
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.78 E-value=4.3e-18 Score=126.50 Aligned_cols=131 Identities=19% Similarity=0.251 Sum_probs=103.7
Q ss_pred ceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEec----CCeEEeecceEEecCCCeEEEEEEEeecCC-CeEEEEE
Q psy12131 11 ESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIY----PPEVSVEKQWIHTAPDMRAEIICNVYANPP-AKVEWFR 85 (245)
Q Consensus 11 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~~~w~~ 85 (245)
..|.|.+++.+|+|.|+|.+.+..+...+..+.|.|.. +|.+...+....+..|+.+.|.|.+.+.|. +.+.|++
T Consensus 144 ~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~~w~~ 223 (292)
T 4dkd_C 144 HGFTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCSASSVDVNFDVFLQH 223 (292)
T ss_dssp SCCEETTCCGGGCSEEEEEECSTTSCEECCCEEEEEECCCCSSCEEEEESSCBCCCSSSCEEEEEEEEESSSCCEEECCB
T ss_pred ceEEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeCCCCCCCeEEccCCceeEecCCCEEEEEEecCCCCceEEEEeC
Confidence 34999999999999999999988776556688899986 888888877777789999999999998765 4788888
Q ss_pred CCEEeccCCcEEEEec--CceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEecC
Q psy12131 86 DGTAITLGGRIDMHVS--SEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIP 141 (245)
Q Consensus 86 ~~~~~~~~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~ 141 (245)
++..+........... ...+.|.|.++..+|.|.|+|.+.|..|.....+.|.+..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 281 (292)
T 4dkd_C 224 NNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFRVVE 281 (292)
T ss_dssp SSCCCCCCBEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEEEEEEEECC--
T ss_pred CCcccccCccceeccceeeeEEEEEECccChhcCeEEEEEEecCCCCceeEEEEEEee
Confidence 8776544332222111 1235899999999999999999999999988888887653
No 145
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.78 E-value=4.8e-18 Score=118.99 Aligned_cols=118 Identities=14% Similarity=0.234 Sum_probs=91.4
Q ss_pred cceEEEeccCCCCCEEEEEEEEcCCCC-ceeeEEEEEEec---CCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEE
Q psy12131 10 RESLDLDRVTLKLAGLYQCIASNNIGE-STSKNFIVNVIY---PPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFR 85 (245)
Q Consensus 10 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~ 85 (245)
...|.|.+++.+|+|.|+|.|.|..|. ..+..+.|.|.. +|.+...+.. .+.+|+.++|.|.+.+ +.+.+.|++
T Consensus 57 ~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~~~~~~~~-~v~~G~~v~L~C~~~~-~~~~~~w~k 134 (196)
T 3p2t_A 57 KARFSIPSMTEDYAGRYRCYYRSPVGWSQPSDPLELVMTGAYSKPTLSALPSP-LVTSGKSVTLLCQSRS-PMDTFLLCK 134 (196)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEEEEECSSCCCEEEEESCS-EECTTCCEEEEEEEEE-EEEEEEEEE
T ss_pred eEEEEeccCCcccCceEEEEEeCCCcccCCCccEEEEecCCCCCCEEEeCCcc-eecCCCeEEEEEecCC-CCCEEEEEe
Confidence 456999999999999999999998772 356778888864 5666555543 5689999999999987 456899999
Q ss_pred CCEEeccCCcE-EEEecCceeEEEEccCCCCCCeEEEEEEEeCCc
Q psy12131 86 DGTAITLGGRI-DMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLG 129 (245)
Q Consensus 86 ~~~~~~~~~~~-~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g 129 (245)
++..+...... ..........|.|.++..+|.|.|+|.|.|..+
T Consensus 135 ~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 135 ERAAHPLLCLRSEHGAQQHQAEFPMSPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp TTCCCGGGSEEEEEEEEEEEEEEEECSCCGGGCEEEEEEEECGGG
T ss_pred CCCcccceeecccccccCcceEEEeCCCcccCCCeEEEEEEcCCC
Confidence 98866543322 122223456899999999999999999999875
No 146
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.78 E-value=5.2e-19 Score=126.28 Aligned_cols=141 Identities=18% Similarity=0.269 Sum_probs=104.2
Q ss_pred cceEEEe-------ecceEEEeccCCCCCEEEEEEEEcCC-CCceeeEEEEEEecCCeEEeecceEEecCCCeE-EEEEE
Q psy12131 2 KEIELLY-------NRESLDLDRVTLKLAGLYQCIASNNI-GESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRA-EIICN 72 (245)
Q Consensus 2 ~~~~~~~-------~~~~L~i~~~~~~d~G~Y~C~~~~~~-~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~-~l~C~ 72 (245)
+|+.+.. +..+|.|.+++.+|+|.|+|.+.+.. +. ....+.|.|..+|.+...+.... ..|+.+ .|.|.
T Consensus 62 ~r~~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~-~~~~~~L~V~~~P~~~~~~~~~~-~~g~~~~~l~C~ 139 (221)
T 3eow_R 62 KRLEFVAARLGAELRDASLRMFGLRVEDEGSYTCLFVTFPQGS-RSVDIWLRVLAKPQNTAEVQKVQ-LTGEPVPMARCV 139 (221)
T ss_dssp SSCEEESSCSSCCCCCCEEECCCSSCCCCSCBEEEEEESSSCS-CEEECCCCCCCCCEEEEEEECCC-CCSSSCCEEEEE
T ss_pred CcEEEecccCCCCCCCceEEEccCChHHCeEEEEEEEeCCCCc-eEEEEEEEEEECCCceeecCCcc-cCCceEEEEEEE
Confidence 4566654 45679999999999999999999876 54 67888889999998876543332 578888 59999
Q ss_pred Ee-ecCCCeEEEEECCEEeccCCcEEEEec---CceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEecCCCC
Q psy12131 73 VY-ANPPAKVEWFRDGTAITLGGRIDMHVS---SEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIPNIP 144 (245)
Q Consensus 73 ~~-~~~~~~~~w~~~~~~~~~~~~~~~~~~---~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~~~p 144 (245)
+. +.|.|.+.|++++.............. ...+.|.|......|.|.|+|.+.|..+.....+.+...|..|
T Consensus 140 ~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~~~v~~~~~~~ 215 (221)
T 3eow_R 140 STGGRPPAQITWHSDLGGMPQTSQVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQLLTVSLTVYYP 215 (221)
T ss_dssp EESCSSCCCEEEECSSSCCCCCEEECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCEEEEECCCCCC-
T ss_pred CCCccCCCeeEEEeCCCCCCccceeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCeEEEEEEEEEcc
Confidence 87 889999999986443222111000001 1245789999999999999999999998888888888776654
No 147
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.77 E-value=5.9e-17 Score=134.86 Aligned_cols=219 Identities=14% Similarity=0.096 Sum_probs=149.9
Q ss_pred ceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecC--CC----eEEEE
Q psy12131 11 ESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANP--PA----KVEWF 84 (245)
Q Consensus 11 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~--~~----~~~w~ 84 (245)
++|.|.+++..|+|.|+|.|.|..|...+..+.|.|..+|.+...+.... .....+.|.|...... .+ .+.|.
T Consensus 223 ~~l~I~~~~~~d~g~Y~c~A~n~~G~~~s~~~~l~V~~~P~~~~~p~~~~-~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~ 301 (731)
T 2v5y_A 223 ASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVKEPPVPIAPPQLAS-VGATYLWIQLNANSINGDGPIVAREVEYC 301 (731)
T ss_dssp EEEEECSCCTTTCEEEEEEEEETTEEEECCCEEEEEECCCCBSSCCEEEE-ECSSCEEEECCCSSBSSCSCCCEEEEEEE
T ss_pred EEEEEcccccccCeEEEEEEECCCCCcceeeEEEEEecCCCCCCCcceec-cCCceEEEEeCCcccCCCCccEEEEEEEE
Confidence 56999999999999999999999886556778899998887655554443 3556788888753221 12 45565
Q ss_pred ECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEE--eCCceeEE--EEEEEec----CCCCccccCccccCCC
Q psy12131 85 RDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQAS--NNLGSSQQ--FIQLSGI----PNIPVFQKSSRRLGPD 156 (245)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~--n~~g~~~~--~~~~~~~----~~~p~~~~~~~~~~~~ 156 (245)
..+ ..+..+. ......+.|.++.+.+.+.|+|.|. |..|.... .+.+... +.+|..... ......
T Consensus 302 ~~~-----~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~~t~~~~p~~~P~~~~~-~~~~~~ 374 (731)
T 2v5y_A 302 TAS-----GSWNDRQ-PVDSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCADPMRGPRKLEV-VEVKSR 374 (731)
T ss_dssp ESS-----SSCEEEE-ECCSSEEEECSCCTTCEEEEEEEEECSSTTCSCCBCCCEEEECCCCCCSCCCEEEEE-EEECSS
T ss_pred ECC-----CCceEEe-ccCcceEEEeCCCCCCEEEEEEEEEecCCCccccCCCcEEeeecCCCCCCCCceeEE-EeccCC
Confidence 432 1122221 2234678999999999999999999 98876542 2233322 233433322 245678
Q ss_pred eeEEEEEeCC----CCCceEEEEEEEeecCCCCeEEE---eeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCC
Q psy12131 157 GYRLVWQVDT----YSGIIQYLLKFREREELTPWRNI---VIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGW 229 (245)
Q Consensus 157 ~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~ 229 (245)
++.|+|.+.. ..++..|.+.|+... ...|... ..... .....+.+.+|.+++.|.|+|.|.|..|.
T Consensus 375 sv~l~W~~p~~~~~~~~~~~y~v~y~~~~-~~~~~~~~~~~~~~~------~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~ 447 (731)
T 2v5y_A 375 QITIRWEPFGYNVTRCHSYNLTVHYCYQV-GGQEQVREEVSWDTE------NSHPQHTITNLSPYTNVSVKLILMNPEGR 447 (731)
T ss_dssp CEEEEEECCCHHHHCSSSCEEEEEEEEES-SSSEEEEEEEECCSS------CSSCEEEECSCCSSCEEEEEEEEECSSCE
T ss_pred eEEEEEECCCcccccceeeeEEEEEEEcc-CCCCccceeEEEEec------CCcceEEECCCCCCCEEEEEEEEEcCCCC
Confidence 9999999842 356789999998865 2333221 11111 11267999999999999999999999999
Q ss_pred CCCCcceEEecCCCCC
Q psy12131 230 SRPSKAYVFATEGAET 245 (245)
Q Consensus 230 ~~~s~~~~~~t~~~~~ 245 (245)
|. |..+.++|...+|
T Consensus 448 s~-S~~~~~~T~~~~P 462 (731)
T 2v5y_A 448 KE-SQELIVQTDEDLP 462 (731)
T ss_dssp EE-CCCEEEECCCCCC
T ss_pred CC-CceEEEEccCCCC
Confidence 84 8889999876543
No 148
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.77 E-value=8.1e-19 Score=132.93 Aligned_cols=137 Identities=21% Similarity=0.394 Sum_probs=105.6
Q ss_pred eecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecC----CeEEe-ecceEEecCCCeEEEEEEEeecCCCeEE
Q psy12131 8 YNRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYP----PEVSV-EKQWIHTAPDMRAEIICNVYANPPAKVE 82 (245)
Q Consensus 8 ~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~----p~~~~-~~~~~~~~~g~~~~l~C~~~~~~~~~~~ 82 (245)
.+...|.|.+++.+|+|.|+|.+.|..|. ....+.|.|... |.+.. .+....+..|+.+.|.|.+.+.|.|.+.
T Consensus 177 ~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~p~v~ 255 (334)
T 1ry7_B 177 HQQWSLVMESVVPSDRGNYTCVVENKFGS-IRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQ 255 (334)
T ss_dssp TTTTEEEECSCCGGGCCCEEEEEEETTEE-EEEEEEEEEECCCCSSCBCCTTCSCCEEEESSCCEEECCCCBCSSCEEEE
T ss_pred cceEEEEECCCCcccCEEEEEEEEeCCCC-EEEEEEEEEecCCCCCCceEecCCCceEEeCCCCEEEEEEEecCCCCeEE
Confidence 34567999999999999999999998877 677888888753 33332 2345667899999999999999999999
Q ss_pred EEE----CCEEeccCCcE--EEEe-------cCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEecCCCCc
Q psy12131 83 WFR----DGTAITLGGRI--DMHV-------SSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIPNIPV 145 (245)
Q Consensus 83 w~~----~~~~~~~~~~~--~~~~-------~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~~~p~ 145 (245)
|++ ++..+...... .+.. ....+.|.|.++...|.|.|+|.|.|..|.....+.|.+.+.++.
T Consensus 256 W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~ 331 (334)
T 1ry7_B 256 WLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVLPAEEE 331 (334)
T ss_dssp EEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEESSCCEEEEEEEEEECSCCC
T ss_pred EEECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEEeCCCCeEEEEEEEEEEECCCC
Confidence 999 66655433221 1111 112247999999999999999999999999988888888766553
No 149
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.77 E-value=2.8e-18 Score=120.60 Aligned_cols=164 Identities=16% Similarity=0.153 Sum_probs=106.0
Q ss_pred EEecCCCeEEEEEE---EeecCCCeEEEEECCEEec-----------------cCCcEEEEecCceeEEEEccCCCCCCe
Q psy12131 59 IHTAPDMRAEIICN---VYANPPAKVEWFRDGTAIT-----------------LGGRIDMHVSSEKHSLLVRHIKDTDFG 118 (245)
Q Consensus 59 ~~~~~g~~~~l~C~---~~~~~~~~~~w~~~~~~~~-----------------~~~~~~~~~~~~~~~l~i~~~~~~d~g 118 (245)
+.+..|+.+.|.|. +.+.|.+.+.|++++.... ....+.+........|.|.++..+|.|
T Consensus 3 Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 82 (203)
T 4fa8_A 3 VTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHDG 82 (203)
T ss_dssp CEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred eEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHCe
Confidence 46779999999996 4577889999999653211 112344444556778999999999999
Q ss_pred EEEEEEEeCCceeEEEEEEEecCCCCccccC---ccccCCCeeEEEEEeCCCCCceEEEEEEEeec-CC---CCeEEEee
Q psy12131 119 NYMCQASNNLGSSQQFIQLSGIPNIPVFQKS---SRRLGPDGYRLVWQVDTYSGIIQYLLKFRERE-EL---TPWRNIVI 191 (245)
Q Consensus 119 ~y~C~~~n~~g~~~~~~~~~~~~~~p~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~ 191 (245)
.|+|.+.|..|.....+.|.+.+ ||.+... .....+..+.|.|.+.+.++. .. .|+++.+ .. ..-..+..
T Consensus 83 ~Y~C~a~n~~g~~~~~~~l~V~~-p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P-~v-~W~~~~~~~~~~~~~~~r~~~ 159 (203)
T 4fa8_A 83 NYLCRMKLGETEVTKQEHLSVVK-PLTLSVHSERSQFPDFSVLTVTCTVNAFPHP-HV-QWLMPEGVEPAPTAANGGVMK 159 (203)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEE-EEEEEEEEEECCSSCSCCEEEEEEEEEESCC-EE-EECCC------------CCEE
T ss_pred EEEEEEEcCCCcEEEEEEEEecC-CceeeecceeEEEcCCCEEEEEEEcCCCCCC-EE-EEEECCeeecCcccccceEEE
Confidence 99999999999888888877764 3332221 334678899999999776433 22 2333322 00 00011112
Q ss_pred CCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCC
Q psy12131 192 PSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSR 231 (245)
Q Consensus 192 ~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~ 231 (245)
...+ ....+.+.++...+.+.|+|.|.|..|..+
T Consensus 160 ~~~g------~l~il~i~~v~~~D~G~YtC~A~N~~G~a~ 193 (203)
T 4fa8_A 160 EKDG------SLSVAVDLSLPKPWHLPVTCVGKNDKEEAH 193 (203)
T ss_dssp CTTS------CEEEEEEEEECSSCCCCEEEEEESSSCEEE
T ss_pred eCCC------CEEEEEECCCCHHHCEEEEEEEEcCCCEEE
Confidence 1211 123344556777777777888999999764
No 150
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.77 E-value=7.1e-18 Score=115.99 Aligned_cols=122 Identities=15% Similarity=0.192 Sum_probs=92.5
Q ss_pred EEeecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCCC-eEEEE
Q psy12131 6 LLYNRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPPA-KVEWF 84 (245)
Q Consensus 6 ~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~-~~~w~ 84 (245)
+..+...|.|.+++.+|+|.|+|.+.+..+ +..+.|.|..+|.....+ ...+.+|+.+.|.|.+.+.+++ .+.|+
T Consensus 49 ~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~---s~~~~l~V~~~~~~~~~~-~~~~~~g~~~~l~C~~~~~~~~~~~~W~ 124 (175)
T 1fnl_A 49 ISSQASSYFIDAATVNDSGEYRCQTNLSTL---SDPVQLEVHIGWLLLQAP-RWVFKEEDPIHLRCHSWKNTALHKVTYL 124 (175)
T ss_dssp EESSCSEEEESSCCGGGCEEEEEECSSSCC---CCCEEEEEECSSEEEECS-CSEEETTCCEEEEEEECTTCCCEEEEEE
T ss_pred ccCCceEEEEeCCCcccCEEEEEEeeCCcc---cccEEEEEeCCCceeeCC-CceecCCCCEEEEEEcCCCCCceEEEEE
Confidence 334567799999999999999999998543 556778887665544443 3557799999999999877664 99999
Q ss_pred ECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCce-eEEEEEEEe
Q psy12131 85 RDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGS-SQQFIQLSG 139 (245)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~-~~~~~~~~~ 139 (245)
+++..+... .....|.|.++..+|.|.|+|.+.|..+. ....+.|.+
T Consensus 125 k~g~~~~~~--------~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V 172 (175)
T 1fnl_A 125 QNGKDRKYF--------HHNSDFHIPKATLKDSGSYFCRGLVGSKNVSSETVNITI 172 (175)
T ss_dssp ETTEEEEEE--------EECCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred ECCeEccCC--------CCCCEEEEcccChhhCeEEEEEEEcCCCCccCccEEEEE
Confidence 999876421 12357999999999999999999997654 333444443
No 151
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.77 E-value=8.4e-18 Score=122.47 Aligned_cols=127 Identities=18% Similarity=0.264 Sum_probs=95.8
Q ss_pred cceEEEeec----ceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEec---------------CCeEEeecceEEec
Q psy12131 2 KEIELLYNR----ESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIY---------------PPEVSVEKQWIHTA 62 (245)
Q Consensus 2 ~~~~~~~~~----~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~---------------~p~~~~~~~~~~~~ 62 (245)
+|+.+..+. .+|.|.+++.+|+|.|+|.+.+..+........|.|.. +|.+...+....+.
T Consensus 67 ~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~ 146 (253)
T 3uzq_A 67 GKATITADTSSNTAYLHLSSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVS 146 (253)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEEC
T ss_pred CcEEEEeecCCCeEEEEeCCCCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEe
Confidence 466666543 34999999999999999999986555334556677774 46677777778899
Q ss_pred CCCeEEEEEEEeecCCC----eEEEEEC--CEEec------------cCCcEEEEecCceeEEEEccCCCCCCeEEEEEE
Q psy12131 63 PDMRAEIICNVYANPPA----KVEWFRD--GTAIT------------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQA 124 (245)
Q Consensus 63 ~g~~~~l~C~~~~~~~~----~~~w~~~--~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 124 (245)
+|+.+.|.|.+.+.+.+ .+.|++. +.... ...++..........|.|.+++.+|.|.|.|.+
T Consensus 147 ~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~ 226 (253)
T 3uzq_A 147 LGQRATISCRASENVDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQR 226 (253)
T ss_dssp TTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCCEEEEEEecCccccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEE
Confidence 99999999999988776 8999983 22111 123455544555678999999999999999999
Q ss_pred EeCC
Q psy12131 125 SNNL 128 (245)
Q Consensus 125 ~n~~ 128 (245)
.|..
T Consensus 227 ~n~~ 230 (253)
T 3uzq_A 227 SNEV 230 (253)
T ss_dssp CSSS
T ss_pred ccCC
Confidence 9864
No 152
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.77 E-value=1.1e-18 Score=122.37 Aligned_cols=118 Identities=14% Similarity=0.081 Sum_probs=80.2
Q ss_pred cceEEEeccCCCCCEEEEEEEEcCCCCc-eeeEEEEEEec---CCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEE
Q psy12131 10 RESLDLDRVTLKLAGLYQCIASNNIGES-TSKNFIVNVIY---PPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFR 85 (245)
Q Consensus 10 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~ 85 (245)
+..|.|.+++.+|+|.|+|.+.|..|.. .+..+.|.|.. +|.+...+. ..+.+|+.+.|.|.+.+.| +.+.|++
T Consensus 57 ~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~i~~~~~-~~v~~G~~v~L~C~~~~~p-~~~~W~k 134 (196)
T 2d3v_A 57 KARFSIPSMTEHHAGRYRCYYYSPAGWSEPSDPLELVVTGFYNKPTLSALPS-PVVTSGENVTLQCGSRLRF-DRFILTE 134 (196)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEETTEECBCCCCEEEEEECSSCCCEEEC------------CEEEEEESSCC-SEEEEEE
T ss_pred ccEEEeccCChhHCeEEEEEEeCCCCcCCcCccEEEEecCCCCCCeEEccCC-ccccCCCcEEEEEEcCCCC-CEEEEEc
Confidence 4569999999999999999999876542 35678888876 566654443 4678999999999999888 8999999
Q ss_pred CCEEeccCCcE-EEEe-cCceeEEEEccCCCCCCeEEEEEEEeCCc
Q psy12131 86 DGTAITLGGRI-DMHV-SSEKHSLLVRHIKDTDFGNYMCQASNNLG 129 (245)
Q Consensus 86 ~~~~~~~~~~~-~~~~-~~~~~~l~i~~~~~~d~g~y~C~~~n~~g 129 (245)
++..+...... .... ......|.|.++..+|.|.|.|.|.|..+
T Consensus 135 ~g~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 135 EGDHKLSWTLDSQLTPSGQFQALFPVGPVTPSHRWMLRCYGSRRHI 180 (196)
T ss_dssp C---CCEEEEECEECTTSCEEEEEECCCCBTTBCEEEEEEEEETTE
T ss_pred cCCcccccccccccccCCCceeEEEeeecCcccCeeEEEEEEccCC
Confidence 98766432111 1111 12346899999999999999999999764
No 153
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.77 E-value=6.6e-18 Score=120.13 Aligned_cols=190 Identities=15% Similarity=0.184 Sum_probs=119.8
Q ss_pred cCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCC--cEEEEecCce--eEEEEccCCCCCCeEEEEE
Q psy12131 48 YPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGG--RIDMHVSSEK--HSLLVRHIKDTDFGNYMCQ 123 (245)
Q Consensus 48 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~--~~~~~~~~~~--~~l~i~~~~~~d~g~y~C~ 123 (245)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ...+...... ..+.|.++...|.|.|+|.
T Consensus 8 ~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~ 87 (217)
T 2vr9_A 8 QSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWCV 87 (217)
T ss_dssp CCCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEEEE
T ss_pred CCCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEEEE
Confidence 57888888888889999999999999999999999999998876542 1222222211 1236788899999999999
Q ss_pred EEeCCceeE---EEEEEEecCCCCcc-ccCccccCCCeeEEEEEe-CCCCCceEEEEEEEeec--CCCCeEEEeeCCCCC
Q psy12131 124 ASNNLGSSQ---QFIQLSGIPNIPVF-QKSSRRLGPDGYRLVWQV-DTYSGIIQYLLKFRERE--ELTPWRNIVIPSDGS 196 (245)
Q Consensus 124 ~~n~~g~~~---~~~~~~~~~~~p~~-~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 196 (245)
+.|..|... ..+.+...+..... ........+..+.|.|.+ .+.++. .+ .|+++.. ........ ....
T Consensus 88 ~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~-~v-~W~~~g~~~~~~~~~~~--~~~~- 162 (217)
T 2vr9_A 88 AKNRVGQAVSRHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEP-TL-IWIKDGVPLDDLKAMSF--GASS- 162 (217)
T ss_dssp EEETTEEEECCCEEEEECEECCSCSBCCCCEEECTTSCEEECCBCCCEESCC-EE-EEEETTEEECCCCCC-----CCC-
T ss_pred EecCCCccccccceEEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCCCCC-eE-EEEECCcCCCccccccc--ccCC-
Confidence 999888653 23333332222111 112335678899999998 555433 23 3444432 10000000 0000
Q ss_pred CCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceEEecCC
Q psy12131 197 LAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYVFATEG 242 (245)
Q Consensus 197 ~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~~t~~ 242 (245)
.........+.|.++...+.+.|+|.|.|..|....+..+.+....
T Consensus 163 ~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~lv~~~~ 208 (217)
T 2vr9_A 163 RVRIVDGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIVQVK 208 (217)
T ss_dssp SEEEETTTEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEEC--
T ss_pred cEEecCCCcEEEeeCCHHHCeEEEEEEEcccceeccccEEEEEEee
Confidence 0000011368899999999999999999999988777655554433
No 154
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=99.77 E-value=3.3e-17 Score=122.45 Aligned_cols=166 Identities=12% Similarity=0.007 Sum_probs=115.3
Q ss_pred ecceEEecCCCeEEEEEEEeec-------CCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeC
Q psy12131 55 EKQWIHTAPDMRAEIICNVYAN-------PPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNN 127 (245)
Q Consensus 55 ~~~~~~~~~g~~~~l~C~~~~~-------~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 127 (245)
.|....+..|+++.|.|.+.+. |.+.+.|++++..+... ++.+. .+..+.|.|.++... .|.|.|.+.+.
T Consensus 10 ~P~~~~v~~G~~v~l~C~~~~~~~~~~~~p~p~i~W~~~g~~i~~~-~~~~~-~~~~~~L~i~~~~~~-~g~Y~C~a~~~ 86 (303)
T 1i1r_A 10 SPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKE-QYTII-NRTASSVTFTDIASL-NIQLTCNILTF 86 (303)
T ss_dssp ESSSCEEETTCCEEEEEEECHHHHHHHTCCGGGEEEEETTEECCGG-GCEEE-ETTEEEEEECSCCCS-EEEEEEEEEET
T ss_pred ccCCceEeCCCCEEEEEEECCccccccCCChhheEEEECCEECChh-heeee-CCcEEEEEEcCcCCC-ceEEEEecccC
Confidence 4555678899999999999863 77899999999988644 33333 334568999999987 49999999885
Q ss_pred Ccee--EE--EEEEEecCCCCccccCccccCCCeeEEEEEeCCC-CCceEEEEEEEeecCCCCeEEEeeCCCCCCCccee
Q psy12131 128 LGSS--QQ--FIQLSGIPNIPVFQKSSRRLGPDGYRLVWQVDTY-SGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIY 202 (245)
Q Consensus 128 ~g~~--~~--~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (245)
.+.. .. .+.+...|.+|...... ......+.|+|.+..+ ..+..|.++|+... ...|........
T Consensus 87 g~~~~~~~~~~l~v~~~P~~P~~l~~~-~~~~~~v~l~W~~~~~~~~~~~Y~v~~~~~~-~~~~~~~~~~~~-------- 156 (303)
T 1i1r_A 87 GQLEQNVYGITIISGLPPEKPKNLSCI-VNEGKKMRCEWDGGRETHLETNFTLKSEWAT-HKFADCKAKRDT-------- 156 (303)
T ss_dssp TTEEEEEEEEEEEEECCCCCCEEEEEE-EETTSCCEEEEECCSCCSSCCEEEEEEEETT-EECCCEECCSSC--------
T ss_pred CCcceEEEEEEEeccCCCCCCeeeEEE-ECCCCcEEEEccCCCCCCCCcCEEEEEEecC-CCCccCCCcCCC--------
Confidence 3221 12 23334456666644432 2445789999998432 34579999998643 222222111111
Q ss_pred eeEEEecCC-CCCceEEEEEEEEecCCCCCCC
Q psy12131 203 TQSYNITGL-QLFTQYEASVLAKNRFGWSRPS 233 (245)
Q Consensus 203 ~~~~~i~~l-~~~~~y~~~v~a~N~~G~~~~s 233 (245)
...+.+.+| .+.+.|.|+|.|.|..|.+.++
T Consensus 157 ~~~~~i~~L~~p~t~Y~f~V~A~N~~G~~~s~ 188 (303)
T 1i1r_A 157 PTSCTVDYSTVYFVNIEVWVEAENALGKVTSD 188 (303)
T ss_dssp TTEEECSSCCCTTSCEEEEEEEEETTEEEECC
T ss_pred ceEEEECCcCcccccEEEEEEEEcCCCCcccC
Confidence 267999999 9999999999999999998643
No 155
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.77 E-value=4.8e-17 Score=115.08 Aligned_cols=176 Identities=18% Similarity=0.205 Sum_probs=115.7
Q ss_pred CeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEe------------ccCCcEEEEecCceeEEEEccCCCCCC
Q psy12131 50 PEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAI------------TLGGRIDMHVSSEKHSLLVRHIKDTDF 117 (245)
Q Consensus 50 p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~ 117 (245)
+.+...+..+.+.+|+.+.|.|.+.+.|.+.+.|++++..+ ....++.... ..|.|.++...|.
T Consensus 2 ~~v~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~----~~L~i~~v~~~D~ 77 (212)
T 1f97_A 2 GSVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSS----SGITFSSVTRKDN 77 (212)
T ss_dssp CEEECSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEET----TEEEESCCCGGGC
T ss_pred ceEEecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeec----eeEEEcccCcccC
Confidence 34455566778889999999999998899999999976442 1233443322 5799999999999
Q ss_pred eEEEEEEEeCCc--eeEEEEEEEe--cCCCCccccCccccCCCeeEEEEE-eCCCCCceEEEEEEEeec-CCCCeE----
Q psy12131 118 GNYMCQASNNLG--SSQQFIQLSG--IPNIPVFQKSSRRLGPDGYRLVWQ-VDTYSGIIQYLLKFRERE-ELTPWR---- 187 (245)
Q Consensus 118 g~y~C~~~n~~g--~~~~~~~~~~--~~~~p~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~-~~~~~~---- 187 (245)
|.|+|.+.|..| .....+.+.+ .|..+..........++.+.|.|. ..+.++. .+. |+++.. .-....
T Consensus 78 G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~i~-W~~~~~~~l~~~~~~~~ 155 (212)
T 1f97_A 78 GEYTCMVSEEGGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPS-EYS-WFKDGISMLTADAKKTR 155 (212)
T ss_dssp EEEEEEEEETTSSSEEEEEEEEEEEBCCCCCEEECCSEEETTSCEEEEEECSCCBSCC-EEE-EEETTEESBC-----CB
T ss_pred eEEEEEEEccCCCcccEEEEEEEEEcCCCCcccCCccccCCCCeEEEEEEcccCcCCC-EEE-EEeCCcccccccccccc
Confidence 999999999866 3444444444 444443333344577899999999 5555433 332 444321 000000
Q ss_pred -----EEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceEEe
Q psy12131 188 -----NIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYVFA 239 (245)
Q Consensus 188 -----~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~~ 239 (245)
....... ...+.|.++...+.+.|+|.|.|..|....+..+.+.
T Consensus 156 ~~~~~~~~~~~~--------~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~ 204 (212)
T 1f97_A 156 AFMNSSFTIDPK--------SGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMD 204 (212)
T ss_dssp SCSSSCEEECTT--------TCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEE
T ss_pred cccCceeEecCC--------CceEEEEecChhhCcEEEEEEccccCCccccceEEEE
Confidence 0111111 1568899999999999999999999988444444443
No 156
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.77 E-value=2.7e-17 Score=119.31 Aligned_cols=127 Identities=17% Similarity=0.317 Sum_probs=94.8
Q ss_pred cceEEEee----cceEEEeccCCCCCEEEEEEEEcCCCCc-eeeEEEEEEecC---------------CeEEeecceEEe
Q psy12131 2 KEIELLYN----RESLDLDRVTLKLAGLYQCIASNNIGES-TSKNFIVNVIYP---------------PEVSVEKQWIHT 61 (245)
Q Consensus 2 ~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~~l~v~~~---------------p~~~~~~~~~~~ 61 (245)
+|+.+..+ ..+|.|.+++.+|+|.|+|.+.+..+.. ....+.|.|..+ |.+...+....+
T Consensus 68 ~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 147 (247)
T 2ghw_B 68 GRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSL 147 (247)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEE
T ss_pred CcEEEEEeCCCCEEEEEECcCCHHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEe
Confidence 46666653 3469999999999999999999873221 233456777754 335555666778
Q ss_pred cCCCeEEEEEEEeecCCCeEEEEE--CCEEec------------cCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeC
Q psy12131 62 APDMRAEIICNVYANPPAKVEWFR--DGTAIT------------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNN 127 (245)
Q Consensus 62 ~~g~~~~l~C~~~~~~~~~~~w~~--~~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 127 (245)
.+|+.+.|.|.+.+.+.+.+.|++ ++..+. ...++.+........|.|.++..+|.|.|.|.+.|.
T Consensus 148 ~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 227 (247)
T 2ghw_B 148 SPGERATLSCRASQSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSN 227 (247)
T ss_dssp CTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSS
T ss_pred cCCCcEEEEEEeCCCccceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccC
Confidence 899999999999999989999998 444321 124555554555678999999999999999999985
Q ss_pred C
Q psy12131 128 L 128 (245)
Q Consensus 128 ~ 128 (245)
.
T Consensus 228 ~ 228 (247)
T 2ghw_B 228 W 228 (247)
T ss_dssp S
T ss_pred C
Confidence 4
No 157
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.77 E-value=2.6e-17 Score=115.23 Aligned_cols=180 Identities=11% Similarity=0.131 Sum_probs=111.5
Q ss_pred cCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeC
Q psy12131 48 YPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNN 127 (245)
Q Consensus 48 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 127 (245)
.+|.+...+.. .+.+|+.+.|.|.+.+.+. .+.|++++..+..... ..........|.|.++..+|.|.|+|.+.|.
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~-~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 80 (196)
T 2d3v_A 4 SKATLWAEPGS-VISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQ-NPLEPKNKARFSIPSMTEHHAGRYRCYYYSP 80 (196)
T ss_dssp CBCEEEEESCS-EEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEE-CCCSSTTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEeCCCC-cccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccc-cccCCccccEEEeccCChhHCeEEEEEEeCC
Confidence 46777776654 6789999999999987665 9999999876542111 0011234678999999999999999999998
Q ss_pred CceeE--EEEEEEec--CCCCccccC--ccccCCCeeEEEEEeCCCCCceEEEEEEEeecCCCCeEEEe--eCCCCCCCc
Q psy12131 128 LGSSQ--QFIQLSGI--PNIPVFQKS--SRRLGPDGYRLVWQVDTYSGIIQYLLKFREREELTPWRNIV--IPSDGSLAG 199 (245)
Q Consensus 128 ~g~~~--~~~~~~~~--~~~p~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 199 (245)
.|... ..+.|.+. +.+|.+... .....++.+.|.|.+.+.++ .+ .|+++.. ...-.... ....
T Consensus 81 ~g~~~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~~p~--~~-~W~k~g~-~~~~~~~~~~~~~~----- 151 (196)
T 2d3v_A 81 AGWSEPSDPLELVVTGFYNKPTLSALPSPVVTSGENVTLQCGSRLRFD--RF-ILTEEGD-HKLSWTLDSQLTPS----- 151 (196)
T ss_dssp TEECBCCCCEEEEEECSSCCCEEEC-----------CEEEEEESSCCS--EE-EEEEC----CCEEEEECEECTT-----
T ss_pred CCcCCcCccEEEEecCCCCCCeEEccCCccccCCCcEEEEEEcCCCCC--EE-EEEccCC-cccccccccccccC-----
Confidence 76432 23344433 334443322 24567889999999977653 33 3555543 11111110 1000
Q ss_pred ceeeeEEEecCCCCCceEEEEEEEEecCC---CCCCCcceEEe
Q psy12131 200 PIYTQSYNITGLQLFTQYEASVLAKNRFG---WSRPSKAYVFA 239 (245)
Q Consensus 200 ~~~~~~~~i~~l~~~~~y~~~v~a~N~~G---~~~~s~~~~~~ 239 (245)
......|.|.++...+.+.|+|.|.|..+ .+..|+.+.+.
T Consensus 152 ~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~ 194 (196)
T 2d3v_A 152 GQFQALFPVGPVTPSHRWMLRCYGSRRHILQVWSEPSDLLEIP 194 (196)
T ss_dssp SCEEEEEECCCCBTTBCEEEEEEEEETTEEEEECCCCCCEEEC
T ss_pred CCceeEEEeeecCcccCeeEEEEEEccCCCCccCCCCccEEEE
Confidence 01236788999999999999999999876 46677776654
No 158
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.77 E-value=1.4e-17 Score=121.60 Aligned_cols=127 Identities=17% Similarity=0.252 Sum_probs=94.0
Q ss_pred cceEEEee----cceEEEeccCCCCCEEEEEEEEcCCC------Cc--eeeEEEEEEecCC---------------eEEe
Q psy12131 2 KEIELLYN----RESLDLDRVTLKLAGLYQCIASNNIG------ES--TSKNFIVNVIYPP---------------EVSV 54 (245)
Q Consensus 2 ~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~~~~~------~~--~~~~~~l~v~~~p---------------~~~~ 54 (245)
+|+.+..+ ..+|.|.+++.+|+|.|+|.+.+..| .. ....+.|.|..+| .+..
T Consensus 65 ~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~ 144 (257)
T 1f3r_B 65 SRLSISRDTSKNQVFLKMNSLQTDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQ 144 (257)
T ss_dssp TTEEEEEETTTTEEEEEEESCCTTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCE
T ss_pred CcEEEEEECCCCEEEEEECCCCcccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEc
Confidence 46666643 34799999999999999999998754 11 1234577887653 2333
Q ss_pred ecceEEecCCCeEEEEEEEeecCCCeEEEEE--CCEEec------------cCCcEEEEecCceeEEEEccCCCCCCeEE
Q psy12131 55 EKQWIHTAPDMRAEIICNVYANPPAKVEWFR--DGTAIT------------LGGRIDMHVSSEKHSLLVRHIKDTDFGNY 120 (245)
Q Consensus 55 ~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~--~~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y 120 (245)
.+....+.+|+.+.|.|.+.+.+.+.+.|++ ++..+. ...++.+........|.|.++..+|.|.|
T Consensus 145 ~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 224 (257)
T 1f3r_B 145 SPSLLSASVGDRVTLSCKGSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATY 224 (257)
T ss_dssp ETSEECCCTTCCEEEEEECSSCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEE
T ss_pred cCCEEEEcCCCCEEEEEEECCcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEE
Confidence 4556678899999999999988888999999 444321 12355554444567899999999999999
Q ss_pred EEEEEeCC
Q psy12131 121 MCQASNNL 128 (245)
Q Consensus 121 ~C~~~n~~ 128 (245)
.|.+.|..
T Consensus 225 ~C~a~n~~ 232 (257)
T 1f3r_B 225 FCYQYNNG 232 (257)
T ss_dssp EEEEESSS
T ss_pred EEEEeCCC
Confidence 99999965
No 159
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.76 E-value=4.9e-18 Score=117.72 Aligned_cols=115 Identities=11% Similarity=0.100 Sum_probs=90.4
Q ss_pred cceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEE
Q psy12131 10 RESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTA 89 (245)
Q Consensus 10 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~ 89 (245)
..+|.|.+++.+|+|.|+|.+.+..+ .+.|.|.. +.. +....+.+|+.+.|.|.+.+.|.|.+.|++++..
T Consensus 67 ~~~L~i~~v~~~D~G~Y~C~~~~~~~-----~~~l~V~~---~~~-~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~ 137 (184)
T 2ny1_B 67 NFPLIIKNLKIEDSDTYICEVEDQKE-----EVQLLVFG---LTA-NSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGK 137 (184)
T ss_dssp BCCEEECSCCGGGCEEEEEEETTEEE-----EEEEEEEE---EEE-SSCSEEETTCCEEEEEECCTTCCCEEEEECTTSC
T ss_pred eEEEEEecCCHHHCEEEEEEEEcCCC-----cEEEEEEE---ecC-CCCceeecCCCEEEEEEcCCCCCCEEEEEeCCCc
Confidence 45599999999999999999997533 45566653 222 2234568999999999999899999999998754
Q ss_pred eccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEecCCC
Q psy12131 90 ITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIPNI 143 (245)
Q Consensus 90 ~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~~~ 143 (245)
+.. ....|.|.++..+|.|.|+|.+.|..+.....+.+.+...|
T Consensus 138 ~~~----------~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~p 181 (184)
T 2ny1_B 138 NIQ----------GGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQ 181 (184)
T ss_dssp EEE----------ESSEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC
T ss_pred ccc----------CceEEEEecCCcCCCeEEEEEEEECCceEEEEEEEEEEecC
Confidence 421 23479999999999999999999999888888777765433
No 160
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.76 E-value=7.1e-18 Score=117.36 Aligned_cols=114 Identities=17% Similarity=0.243 Sum_probs=88.0
Q ss_pred ecceEEEeccCCCCCEEEEEEEEcCCCCc-eeeEEEEEEec---CCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEE
Q psy12131 9 NRESLDLDRVTLKLAGLYQCIASNNIGES-TSKNFIVNVIY---PPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWF 84 (245)
Q Consensus 9 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~ 84 (245)
.+..|.|.+++.+|+|.|+|.+.+..+.. .+..+.|.|.. +|.+...+. ..+.+|+.+.|.|.+.+ +.+.+.|+
T Consensus 55 ~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~ 132 (188)
T 1oll_A 55 NKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVHPG-PEVISGEKVTFYCRLDT-ATSMFLLL 132 (188)
T ss_dssp CEEEEEESSCCGGGCEEEEEEEEETTEECCCCCCEEEEEESCSCCCEEEEESC-SEEETTCEEEEEEECSS-SCSEEEEE
T ss_pred ceeEEEeCcCCcccCeEEEEEecCCCCCCCCCCceEEEecccCCCCeEEECCC-CccccCCEEEEEEEcCC-CCCEEEEE
Confidence 34569999999999999999998865432 46678888874 677665553 45789999999999865 45799999
Q ss_pred ECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCC
Q psy12131 85 RDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNL 128 (245)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 128 (245)
+++..+.. ..........|.|.+++.+|.|.|.|.+.|..
T Consensus 133 k~g~~~~~----~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~ 172 (188)
T 1oll_A 133 KEGRSSHV----QRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNN 172 (188)
T ss_dssp EESSSCEE----EEEECSSEEEEEEEECCGGGCEEEEEECEEET
T ss_pred ECCccccc----cccCCCceeEEEECCCCcCCCcEEEEEEEcCC
Confidence 98865543 12233456789999999999999999999864
No 161
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.76 E-value=3.1e-17 Score=119.66 Aligned_cols=127 Identities=17% Similarity=0.280 Sum_probs=96.3
Q ss_pred cceEEEeec----ceEEEeccCCCCCEEEEEEEEcCCC---CceeeEEEEEEec----------------CCeEEeecce
Q psy12131 2 KEIELLYNR----ESLDLDRVTLKLAGLYQCIASNNIG---ESTSKNFIVNVIY----------------PPEVSVEKQW 58 (245)
Q Consensus 2 ~~~~~~~~~----~~L~i~~~~~~d~G~Y~C~~~~~~~---~~~~~~~~l~v~~----------------~p~~~~~~~~ 58 (245)
+|+.+..+. .+|.|.+++.+|+|.|+|.+.+..+ ........|.|.. +|.+...+..
T Consensus 68 ~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 147 (256)
T 3umt_A 68 GKAILTVDKSSSTAYLELRSLTSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSS 147 (256)
T ss_dssp TTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSE
T ss_pred ceEEEEEecCCCEEEEEECCCCcccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCe
Confidence 466666432 3499999999999999999998721 1134456777774 6677777777
Q ss_pred EEecCCCeEEEEEEEeecCCCeEEEEEC--CEEec------------cCCcEEEEecCceeEEEEccCCCCCCeEEEEEE
Q psy12131 59 IHTAPDMRAEIICNVYANPPAKVEWFRD--GTAIT------------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQA 124 (245)
Q Consensus 59 ~~~~~g~~~~l~C~~~~~~~~~~~w~~~--~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 124 (245)
..+.+|+.+.|.|.+.+.+.+.+.|++. +.... ...++.....+....|.|.++..+|.|.|.|.+
T Consensus 148 ~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 227 (256)
T 3umt_A 148 LSASLGERVSITCRASQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQ 227 (256)
T ss_dssp EEECTTCCEEEEEEESSCCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEE
T ss_pred EEEECCCCEEEEEEEecCCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEE
Confidence 8899999999999999988889999983 21111 124555555556678999999999999999999
Q ss_pred EeCC
Q psy12131 125 SNNL 128 (245)
Q Consensus 125 ~n~~ 128 (245)
.+..
T Consensus 228 ~~~~ 231 (256)
T 3umt_A 228 YASS 231 (256)
T ss_dssp CSSS
T ss_pred eeCC
Confidence 9854
No 162
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.76 E-value=8.7e-18 Score=115.65 Aligned_cols=121 Identities=17% Similarity=0.198 Sum_probs=91.8
Q ss_pred eecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEe-ecCCCeEEEEEC
Q psy12131 8 YNRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVY-ANPPAKVEWFRD 86 (245)
Q Consensus 8 ~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~-~~~~~~~~w~~~ 86 (245)
.++..|.|.+++.+|+|.|+|.+.+..+ +..+.|.|..++.....+ ...+.+|+.+.|.|.+. +.|.+.+.|+++
T Consensus 48 ~~~~~L~i~~v~~~d~G~Y~C~~~~~~~---s~~~~l~V~~~~~~~~~~-~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~ 123 (176)
T 1f2q_A 48 ETNSSLNIVNAKFEDSGEYKCQHQQVNE---SEPVYLEVFSDWLLLQAS-AEVVMEGQPLFLRCHGWRNWDVYKVIYYKD 123 (176)
T ss_dssp CCSSEEEECSCCGGGCEEEEEECTTSSC---CCCEEEEEECSSEEEEES-CSEEETTSCEEEEEEEGGGCCEEEEEEEET
T ss_pred CCceEEEEeccceecCEEEEEEcCCccc---cccEEEEEeCcceeecCC-cceeeCCCCEEEEEEecCCCCceEEEEEEC
Confidence 3457799999999999999999987543 456777877655544443 34567999999999994 566679999999
Q ss_pred CEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCce-eEEEEEEEec
Q psy12131 87 GTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGS-SQQFIQLSGI 140 (245)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~-~~~~~~~~~~ 140 (245)
+..+.... ....|.|.++..+|.|.|+|.+.|..+. ....+.+.+.
T Consensus 124 g~~~~~~~--------~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~ 170 (176)
T 1f2q_A 124 GEALKYWY--------ENHNISITNATVEDSGTYYCTGKVWQLDYESEPLNITVI 170 (176)
T ss_dssp TEECCSCC--------CSSEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred CEEEeeec--------CCCeEEECCCCcccCEEEEEEEEeCCcceEecCEEEEEe
Confidence 98774321 2457999999999999999999997543 3344555554
No 163
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.76 E-value=9.2e-18 Score=120.46 Aligned_cols=120 Identities=24% Similarity=0.358 Sum_probs=90.2
Q ss_pred EEeecceEEEeccCCCCCEEEEEEEEcCC-CCceeeEEEEEEecCC---eEEeecceEEecCCCeE-EEEEEE-eecCCC
Q psy12131 6 LLYNRESLDLDRVTLKLAGLYQCIASNNI-GESTSKNFIVNVIYPP---EVSVEKQWIHTAPDMRA-EIICNV-YANPPA 79 (245)
Q Consensus 6 ~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~-~~~~~~~~~l~v~~~p---~~~~~~~~~~~~~g~~~-~l~C~~-~~~~~~ 79 (245)
+..++ .|.|.+++.+|+|.|+|.+.+.. +. ....+.|.|..+| .+...+....+..|+.+ .|.|.+ .+.|.|
T Consensus 73 ~~~~~-~L~i~~v~~~D~G~Y~C~~~~~~~~~-~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p 150 (231)
T 2pet_A 73 LDSQG-RLVLAEAQVGDERDYVCVVRAGAAGT-AEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAP 150 (231)
T ss_dssp ECTTC-CEEESSCCGGGCEEEEEEEECGGGCE-EEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCC
T ss_pred cCCCc-eEEEcccCcccCceEEEEEEecCCCc-eEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCC
Confidence 44334 49999999999999999999886 44 6788889998764 44444455556788888 999999 899999
Q ss_pred eEEEEECCEEeccCC----cEEEEec----Cc-----eeEEEEccCCCCCCeEEEEEEEeC
Q psy12131 80 KVEWFRDGTAITLGG----RIDMHVS----SE-----KHSLLVRHIKDTDFGNYMCQASNN 127 (245)
Q Consensus 80 ~~~w~~~~~~~~~~~----~~~~~~~----~~-----~~~l~i~~~~~~d~g~y~C~~~n~ 127 (245)
.+.|++++..+.... ++.+... .. .+.|.|.....+|.|.|+|.|.|.
T Consensus 151 ~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 151 KITWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYS 211 (231)
T ss_dssp EEEEEETTEECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEE
T ss_pred EEEEEECCccCccccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcC
Confidence 999999999887654 3333221 01 156778755555699999999994
No 164
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.76 E-value=2.3e-19 Score=136.72 Aligned_cols=206 Identities=12% Similarity=0.080 Sum_probs=138.3
Q ss_pred CCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEec
Q psy12131 22 LAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVS 101 (245)
Q Consensus 22 d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 101 (245)
|.|.|+|.+.+... .+.+.+..+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|++++..+..... ....
T Consensus 136 ~~~~~~C~~~~~l~-----~l~~~~c~~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~--~~~~ 208 (347)
T 2ifg_A 136 PEQKLQCHGQGPLA-----HMPNASCGVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVM--KSGG 208 (347)
T ss_dssp GGGCCCCSSSSCSS-----CCCCTTCCCCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEEC--CCCC
T ss_pred cccCCCCCCChHHh-----cCCcccCCCCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeecccc--ccee
Confidence 57889998877222 1223344688888888778889999999999999999999999998764332110 0122
Q ss_pred CceeEEEEccCCCCCCe-EEEEEEEeCCceeEEEEEEEecCCCCccccCccccCCCeeEEEEEeCCCCCceEEEEEEEee
Q psy12131 102 SEKHSLLVRHIKDTDFG-NYMCQASNNLGSSQQFIQLSGIPNIPVFQKSSRRLGPDGYRLVWQVDTYSGIIQYLLKFRER 180 (245)
Q Consensus 102 ~~~~~l~i~~~~~~d~g-~y~C~~~n~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 180 (245)
.....|.|.++...|.| .|+|.+.|..|.....+.+.+... |.+ .......+..+.|.|.+.+.++. .+ .|+++.
T Consensus 209 ~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~V~~~-P~i-~~~~~~~g~~v~l~C~~~g~P~p-~i-~W~~~g 284 (347)
T 2ifg_A 209 LPSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNVSFP-ASV-QLHTAVEMHHWCIPFSVDGQPAP-SL-RWLFNG 284 (347)
T ss_dssp SSEEEEEEESCCSTTTTCCEEECCEETTEECCEEECCCCBEE-EEE-EECCCEESSSEEEEEEEEEESCC-EE-EEEETT
T ss_pred cccceEEEeeCChHHCCCeEEEEEEcCCCCEEEEEEEEEcCC-Cee-eeccCccCceEEEEEEeeecCCC-cE-EEEeCC
Confidence 34668999999999999 999999999988877776666433 332 12223567899999999766433 23 244443
Q ss_pred c--CCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceEEe
Q psy12131 181 E--ELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYVFA 239 (245)
Q Consensus 181 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~~ 239 (245)
. .............+. ........+.|.++...+.+.|+|.|.|.+|....+..+.|.
T Consensus 285 ~~l~~~~~~~~~~~~~~~-~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 344 (347)
T 2ifg_A 285 SVLNETSFIFTEFLEPAA-NETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFM 344 (347)
T ss_dssp EECCCCSSEEEEECCCCT-TCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEECSC
T ss_pred EECCCCcceeeEEEeecC-CCcccceEEEECCCCcccCceEEEEEecCCCceeeEEEEEec
Confidence 3 122222221111000 111223568999999999999999999999987666555554
No 165
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.76 E-value=6.2e-19 Score=133.04 Aligned_cols=215 Identities=11% Similarity=0.033 Sum_probs=120.1
Q ss_pred eEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEE---ecCCeEE-eecceEEecCCCeEEEEEEEeec-CCC---eEEE
Q psy12131 12 SLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNV---IYPPEVS-VEKQWIHTAPDMRAEIICNVYAN-PPA---KVEW 83 (245)
Q Consensus 12 ~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v---~~~p~~~-~~~~~~~~~~g~~~~l~C~~~~~-~~~---~~~w 83 (245)
.|.|.++..+|+|.|+|.|.|..+. ....+.+.+ ...|.+. ..+....+..|+.+.|.|.+.+. |.+ .+.|
T Consensus 73 ~l~i~~~~~~d~g~Y~C~a~n~~~~-~~~~~~~~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W 151 (323)
T 2wqr_A 73 ELTLSQKHWLSDRTYTCQVTYQGHT-FEDSTKKCADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTW 151 (323)
T ss_dssp EEEEEHHHHHTTCCEEEEEEETTEE-EEEEECCCCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEE
T ss_pred EEEEcHHHcCCCCcEEEEEEeCCCC-cceeeecCCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEE
Confidence 4788888888999999999997654 233332211 1234332 33434456789999999999886 456 8999
Q ss_pred EECC-EEeccCCcEEEEe-cC---ceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEe---cCCCCcccc---Cccc
Q psy12131 84 FRDG-TAITLGGRIDMHV-SS---EKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSG---IPNIPVFQK---SSRR 152 (245)
Q Consensus 84 ~~~~-~~~~~~~~~~~~~-~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~---~~~~p~~~~---~~~~ 152 (245)
++++ ..+.......... .+ ..+.|.|.++..+|.|.|.|.+.|..+.....+.+.. ...+|.+.. ....
T Consensus 152 ~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~ 231 (323)
T 2wqr_A 152 SRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEWP 231 (323)
T ss_dssp EETTCCCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEEECCCCT
T ss_pred EECCCcccccccCCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCCCCCeeeEEEccCCCCCCCEEEEeCCChHH
Confidence 9964 4433222111111 11 2347999999999999999999998644333344322 123333221 1122
Q ss_pred cCCCeeEEEEEeCC-CCCceEEEEEEEeec--CCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCC
Q psy12131 153 LGPDGYRLVWQVDT-YSGIIQYLLKFRERE--ELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGW 229 (245)
Q Consensus 153 ~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~ 229 (245)
..++.+.|.|.+.+ +++... ..|+++.. ...... ...........-.....+.|......+...|.|.|.|..+.
T Consensus 232 ~~g~~~~l~C~~~g~~p~~~~-v~W~k~g~~l~~~~~~-~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 232 GSRDKRTLACLIQNFMPEDIS-VQWLHNEVQLPDARHS-TTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp TCTTEEEEEEEEEEEBSSCCE-EEEEETTEECCGGGEE-ECCCEECSSSSEEEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred hcCCcEEEEEEeeeeeCCCcE-EEEEECCEECCCCcee-ecCcccCCCCcEEEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 34889999999965 333222 23555433 111111 10000000000011234666655554445555559999876
No 166
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.76 E-value=4.5e-18 Score=120.66 Aligned_cols=130 Identities=18% Similarity=0.231 Sum_probs=93.1
Q ss_pred cceEEEeec--ceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEec---CCeEEeecceEEecCCCeEEEEEEEee-
Q psy12131 2 KEIELLYNR--ESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIY---PPEVSVEKQWIHTAPDMRAEIICNVYA- 75 (245)
Q Consensus 2 ~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~- 75 (245)
+|+.+...+ .+|.|.+++.+|+|.|+|.+.+..+........|.|.. +|.+...+.......|+.+.|.|.+.+
T Consensus 60 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~ 139 (213)
T 3d9a_L 60 SRFSGSGSGTDFTLSINSVETEDFGMYFCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNF 139 (213)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEE
T ss_pred ccEEEEcCCCEEEEEECCCChhhCEEEEEeeecCCcceeCCCEEEEEecCCCCceeEeECCChhhcCCCcEEEEEEEeee
Confidence 355555433 37999999999999999999988765333345677765 677666443333447889999999987
Q ss_pred cCCC-eEEEEECCEEeccCCcEEE--EecC-----ceeEEEEccCCCCCCeEEEEEEEeCCcee
Q psy12131 76 NPPA-KVEWFRDGTAITLGGRIDM--HVSS-----EKHSLLVRHIKDTDFGNYMCQASNNLGSS 131 (245)
Q Consensus 76 ~~~~-~~~w~~~~~~~~~~~~~~~--~~~~-----~~~~l~i~~~~~~d~g~y~C~~~n~~g~~ 131 (245)
.|.+ .+.|++++..+........ .... ..+.|.|.++..+|.|.|+|.|.|.....
T Consensus 140 ~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 203 (213)
T 3d9a_L 140 YPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 203 (213)
T ss_dssp BSSCCEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred cCCceEEEEEcCCCcCcceeeecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCC
Confidence 5555 8999999988765411111 0011 13489999999999999999999986553
No 167
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.76 E-value=1.4e-17 Score=118.19 Aligned_cols=129 Identities=15% Similarity=0.127 Sum_probs=95.5
Q ss_pred ceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeE-EeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEE
Q psy12131 11 ESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEV-SVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTA 89 (245)
Q Consensus 11 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~-~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~ 89 (245)
.+|.|.+++.+|+|.|+|.+.+..+........+.+..++.. ........+..+..+.+.|.+.+.|.|.+.|++++..
T Consensus 79 ~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~ 158 (218)
T 4frw_A 79 GSVLLRNAVQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKG 158 (218)
T ss_dssp CCEEESSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCC
T ss_pred EEEEEeeccHHHCCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeeccCCcCceEEEEECCcc
Confidence 469999999999999999999876654445555555544333 3344556677899999999999999999999998876
Q ss_pred eccCCcEEEEe-cCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEe
Q psy12131 90 ITLGGRIDMHV-SSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSG 139 (245)
Q Consensus 90 ~~~~~~~~~~~-~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~ 139 (245)
+.......... ....+.|.|..+...|.|.|+|.|.|..|.....+++.+
T Consensus 159 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v 209 (218)
T 4frw_A 159 TTSSRSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHIL 209 (218)
T ss_dssp EEEEEEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEEC
T ss_pred cccCceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEE
Confidence 65432221100 012357999999999999999999999988776666553
No 168
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.76 E-value=9.3e-18 Score=120.17 Aligned_cols=128 Identities=13% Similarity=0.074 Sum_probs=85.4
Q ss_pred cceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEee-cCCCeEEEEECC-
Q psy12131 10 RESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYA-NPPAKVEWFRDG- 87 (245)
Q Consensus 10 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~~~~w~~~~- 87 (245)
..+|.|.+++.+|+|.|+|.|.|..|. ....+.+.+. +.+...+....+..|..+.+.|.+.| .|.|.+.|++++
T Consensus 82 ~~~L~I~~v~~~D~G~Y~C~a~n~~~~-~~~~v~~~~~--~~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~ 158 (226)
T 4f80_A 82 KAALRIHNVTASDSGKYLCYFQDGDFY-EKALVELKVA--ALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKG 158 (226)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEETTEE-EEEEEEEEEE--BCCCCCEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTS
T ss_pred eEEEEEeeCchHHCeeEEEEEECCCcE-EEEEEEEeec--cceecccceeeeccCCceeeEEEeccCCCCCEEEEEECCc
Confidence 356999999999999999999997665 4444444443 33333344456678999999999988 589999999865
Q ss_pred EEeccCCcEEEEec-CceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEec
Q psy12131 88 TAITLGGRIDMHVS-SEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGI 140 (245)
Q Consensus 88 ~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~ 140 (245)
..+........... +.-..+.+..+..+|.|.|+|.|.|..|...+.+.+.+.
T Consensus 159 ~~~~~~~~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v~ 212 (226)
T 4f80_A 159 ENIPTVEAPVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISIA 212 (226)
T ss_dssp CBCCCEECCCEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEEECCC
T ss_pred eEcCCCceEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEEC
Confidence 33332222112211 111233344567889999999999999988888777664
No 169
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.76 E-value=8.1e-18 Score=119.72 Aligned_cols=112 Identities=16% Similarity=0.174 Sum_probs=88.5
Q ss_pred eEEEeccCCCCCEEEEEEEEcCCCCc-eeeEEEEEEec---CCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECC
Q psy12131 12 SLDLDRVTLKLAGLYQCIASNNIGES-TSKNFIVNVIY---PPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDG 87 (245)
Q Consensus 12 ~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~ 87 (245)
.|.|.+++.+|+|.|+|.+.|..+.. .+..+.|.|.. +|.+...+ ...+.+|+.+.|.|...+.+.+.+.|++++
T Consensus 65 ~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~~~l~V~~~~~~P~i~~~p-~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g 143 (218)
T 1uct_A 65 EFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVTGLYGKPFLSADR-GLVLMPGENISLTCSSAHIPFDRFSLAKEG 143 (218)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTTEEEECCCEEEEEECSSCCCEEEESS-CSEECTTCCCEEEEECSSSCCSEEEEEETT
T ss_pred EEEEcccccccCEEEEEEEEcCCCceeecCCEEEEEcCcccCCEEEeCC-CCccCCCCCEEEEEeCCCCCCCEEEEEECC
Confidence 79999999999999999999976532 45667888875 56665555 346789999999997777778899999998
Q ss_pred EEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCC
Q psy12131 88 TAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNL 128 (245)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 128 (245)
..+... .........|.|.++..+|.|.|.|.+.|..
T Consensus 144 ~~~~~~----~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 180 (218)
T 1uct_A 144 ELSLPQ----HQSGEHPANFSLGPVDLNVSGIYRCYGWYNR 180 (218)
T ss_dssp CSSCCS----EEECSSSEEEECCSCCGGGCEEEEEEEECTT
T ss_pred Cccccc----ccCCCccCEEEEccCCcccCEEEEEEEEcCC
Confidence 766542 1123345689999999999999999999853
No 170
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.76 E-value=2.1e-17 Score=119.27 Aligned_cols=126 Identities=17% Similarity=0.198 Sum_probs=90.4
Q ss_pred ceEEEe---ecceEEEeccCCCCCEEEEEEEEcCCCCc----eeeEEEEEEecCC------------eEEeecceEEecC
Q psy12131 3 EIELLY---NRESLDLDRVTLKLAGLYQCIASNNIGES----TSKNFIVNVIYPP------------EVSVEKQWIHTAP 63 (245)
Q Consensus 3 ~~~~~~---~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~----~~~~~~l~v~~~p------------~~~~~~~~~~~~~ 63 (245)
|+.+.. +..+|.|.+++.+|+|.|+|.+.+..|.. ......|.|...+ .+...+....+.+
T Consensus 62 r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~ 141 (238)
T 2p1y_A 62 GYKASRPSQENFSLILELATPSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWE 141 (238)
T ss_dssp TCEEECCSSSBCEEEESSCCGGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEET
T ss_pred eEEEEccCCceEEEEEecCCcccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeC
Confidence 555553 34579999999999999999999875421 1234567776543 4555666777899
Q ss_pred CCeEEEEEEEeecCCCeEEEEECCE-----Ee---------ccCCcEEEE--ecCceeEEEEccCCCCCCeEEEEEEEeC
Q psy12131 64 DMRAEIICNVYANPPAKVEWFRDGT-----AI---------TLGGRIDMH--VSSEKHSLLVRHIKDTDFGNYMCQASNN 127 (245)
Q Consensus 64 g~~~~l~C~~~~~~~~~~~w~~~~~-----~~---------~~~~~~~~~--~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 127 (245)
|+.+.|.|.+.+.|.+.+.|++++. .+ ....++.+. .......|.|.++..+|.|.|.|.+.|.
T Consensus 142 G~~v~L~C~~~~~p~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 221 (238)
T 2p1y_A 142 GETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDT 221 (238)
T ss_dssp TSCEEEEEECCCTTCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEET
T ss_pred CCeEEEEEEEecCCCCcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeC
Confidence 9999999999999999999998531 11 112344443 2334578999999999999999999997
Q ss_pred C
Q psy12131 128 L 128 (245)
Q Consensus 128 ~ 128 (245)
.
T Consensus 222 ~ 222 (238)
T 2p1y_A 222 N 222 (238)
T ss_dssp T
T ss_pred C
Confidence 3
No 171
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.76 E-value=5e-18 Score=128.38 Aligned_cols=125 Identities=22% Similarity=0.393 Sum_probs=103.3
Q ss_pred ceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeec-ceEEecCCCeEEEEEEEeecCCCe-EEEEECCE
Q psy12131 11 ESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEK-QWIHTAPDMRAEIICNVYANPPAK-VEWFRDGT 88 (245)
Q Consensus 11 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~-~~~~~~~g~~~~l~C~~~~~~~~~-~~w~~~~~ 88 (245)
+.|.|.+++.+|+|.|+|.|.|..+. .+..+.|.|..+|.+...+ ....+..|+.+.|.|.+.+.|.|. +.|++++.
T Consensus 194 ~~L~i~~~~~~d~G~Y~C~a~n~~~~-~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~ 272 (331)
T 3u83_A 194 SRYRLVPSREAHQQSLACIVNYHMDR-FKESLTLNVQYEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNG 272 (331)
T ss_dssp EEEEECCCGGGTTCEEEEEEEETTEE-EEEEEECCEEEEEEEEEECCCSCCBTTCCCEEEEEEEEEESCCCEEEEEETTB
T ss_pred EEEEEEeccccCCCEEEEEEecCCCc-ceeeEEEEEecCCeEEEecCCCceEeCCCeEEEEEeCcCCCCCCEEEEEECCC
Confidence 34888888999999999999998876 6788999999888877543 344577899999999999999997 99999988
Q ss_pred EeccCCcEEEEecCceeEEEEc-cCCCCCCeEEEEEEEeCCceeEEEEEEEecCC
Q psy12131 89 AITLGGRIDMHVSSEKHSLLVR-HIKDTDFGNYMCQASNNLGSSQQFIQLSGIPN 142 (245)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~l~i~-~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~~ 142 (245)
.+.... .. ....|.|. ++..+|.|.|+|.|.|..|.....+.|.+...
T Consensus 273 ~~~~~~--~~----~~~~L~i~~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~ 321 (331)
T 3u83_A 273 SLPKGV--EA----QNRTLFFKGPINYSLAGTYICEATNPIGTRSGQVEVNITEA 321 (331)
T ss_dssp SCCTTE--EE----ETTEEEECSCCCGGGCEEEEEEEEETTEEEEEEEEECCBC-
T ss_pred cccccc--ee----cCcEEEEeCCCccccCeEEEEEEEeccccceEEEEEEEecc
Confidence 765432 11 23479999 89999999999999999999988888877643
No 172
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.76 E-value=1.4e-17 Score=114.53 Aligned_cols=169 Identities=14% Similarity=0.134 Sum_probs=113.3
Q ss_pred ecCCeEEeecceEEecCCCeEEEEEEEeecCCC-eEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEE
Q psy12131 47 IYPPEVSVEKQWIHTAPDMRAEIICNVYANPPA-KVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQAS 125 (245)
Q Consensus 47 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 125 (245)
..+|.+...+....+.+|+.+.|.|.+.+.+.+ .+.|++++..+... ...|.|.++..+|.|.|+|.+.
T Consensus 2 ~~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~~----------~~~L~i~~v~~~d~G~Y~C~~~ 71 (176)
T 1f2q_A 2 PQKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEET----------NSSLNIVNAKFEDSGEYKCQHQ 71 (176)
T ss_dssp --CCCCEEESSCSEEETTCCEEEECCTTCC----CCEEEETTEECSCC----------SSEEEECSCCGGGCEEEEEECT
T ss_pred CCCCEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEECCeECCCC----------ceEEEEeccceecCEEEEEEcC
Confidence 356777777777778999999999999888775 69999999876642 3479999999999999999999
Q ss_pred eCCceeEEEEEEEecCCCCccc-cCccccCCCeeEEEEEeCCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeee
Q psy12131 126 NNLGSSQQFIQLSGIPNIPVFQ-KSSRRLGPDGYRLVWQVDTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQ 204 (245)
Q Consensus 126 n~~g~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (245)
|..+.....+.+. +.+.... .......++.+.|.|...++.|...+. |+++.. .+..... ..
T Consensus 72 ~~~~s~~~~l~V~--~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~-W~~~g~------~~~~~~~--------~~ 134 (176)
T 1f2q_A 72 QVNESEPVYLEVF--SDWLLLQASAEVVMEGQPLFLRCHGWRNWDVYKVI-YYKDGE------ALKYWYE--------NH 134 (176)
T ss_dssp TSSCCCCEEEEEE--CSSEEEEESCSEEETTSCEEEEEEEGGGCCEEEEE-EEETTE------ECCSCCC--------SS
T ss_pred CccccccEEEEEe--CcceeecCCcceeeCCCCEEEEEEecCCCCceEEE-EEECCE------EEeeecC--------CC
Confidence 9776555555544 2222211 123456889999999996554543343 554432 1111111 15
Q ss_pred EEEecCCCCCceEEEEEEEEecCCC-CCCCcceEEecCC
Q psy12131 205 SYNITGLQLFTQYEASVLAKNRFGW-SRPSKAYVFATEG 242 (245)
Q Consensus 205 ~~~i~~l~~~~~y~~~v~a~N~~G~-~~~s~~~~~~t~~ 242 (245)
.+.|.++...+.+.|+|.|.|..|. ...+..+.+...|
T Consensus 135 ~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p 173 (176)
T 1f2q_A 135 NISITNATVEDSGTYYCTGKVWQLDYESEPLNITVIKAP 173 (176)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEECSC
T ss_pred eEEECCCCcccCEEEEEEEEeCCcceEecCEEEEEecCC
Confidence 7889999999999999999997443 2233345554443
No 173
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.76 E-value=2e-17 Score=123.97 Aligned_cols=122 Identities=14% Similarity=0.258 Sum_probs=95.2
Q ss_pred eEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEE---------------------ecCCeEEeecceEEecCCCeEEEE
Q psy12131 12 SLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNV---------------------IYPPEVSVEKQWIHTAPDMRAEII 70 (245)
Q Consensus 12 ~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v---------------------~~~p~~~~~~~~~~~~~g~~~~l~ 70 (245)
.|.|.+++.+|+|.|+|.+.+... .....+.+ ..+|.+..... ..+..|+.+.|.
T Consensus 167 ~L~i~~~~~~d~G~Y~C~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~v~~G~~~~l~ 242 (312)
T 2y23_A 167 EMFMEKLQDEDEGTYTFQLQDGKA---TNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLS-WEVTGECNVLLK 242 (312)
T ss_dssp EEEESCCCGGGCEEEEEEEESSSC---EEEEEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEEEE-EEEETTTEEEEE
T ss_pred EEEEccCCcccCEeEEEEEEeCCc---eEEEEEEEcchhhhhhcccccccccchhhccCCceeecce-EEEeCCCEEEEE
Confidence 399999999999999999986432 33343443 12365554333 667899999999
Q ss_pred EEEeecCCC-eEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEe
Q psy12131 71 CNVYANPPA-KVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSG 139 (245)
Q Consensus 71 C~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~ 139 (245)
|.+.+.|.| .+.|++++..+....++.+. .....|.|.++..+|.|.|.|.|.|..|.....+.|.+
T Consensus 243 C~~~~~p~~~~v~W~~~g~~~~~~~~~~~~--~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~i 310 (312)
T 2y23_A 243 CKVANIKKETHIVWYKDEREISVDEKHDFK--DGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVD 310 (312)
T ss_dssp EEEESCCSSCEEEEEETTEEEEEECCC------CEEEEEECSCSGGGCEEEEEEEESTTCCEEEEEEECS
T ss_pred EEEcCCCCCCEEEEeeCCEECCCCCcEEEE--CCEEEEEECcCCHHHCEEEEEEEEcCCCceeeeeEEEe
Confidence 999999988 99999999988765555543 34578999999999999999999999999988887764
No 174
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.76 E-value=3.4e-17 Score=101.59 Aligned_cols=92 Identities=18% Similarity=0.348 Sum_probs=80.4
Q ss_pred CCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCC--cEEEEecCceeEEEEccCCCCCCeEEEEEEEe
Q psy12131 49 PPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGG--RIDMHVSSEKHSLLVRHIKDTDFGNYMCQASN 126 (245)
Q Consensus 49 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 126 (245)
||.+...+..+.+.+|+.+.|.|.+.|.|.|.+.|++++..+.... ++.+...+....|.|.++..+|.|.|+|.|.|
T Consensus 5 PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N 84 (100)
T 3knb_A 5 PPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGN 84 (100)
T ss_dssp EEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEEE
Confidence 6777777778889999999999999999999999999999887543 56777777788999999999999999999999
Q ss_pred CCceeEEEEEEEec
Q psy12131 127 NLGSSQQFIQLSGI 140 (245)
Q Consensus 127 ~~g~~~~~~~~~~~ 140 (245)
..|.....+.|.+.
T Consensus 85 ~~G~~~~~~~l~V~ 98 (100)
T 3knb_A 85 EFGSDSATVNIHIR 98 (100)
T ss_dssp TTEEEEEEEEEEEE
T ss_pred CCCEEEEEEEEEEE
Confidence 99998888877764
No 175
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.76 E-value=5.3e-18 Score=133.38 Aligned_cols=167 Identities=13% Similarity=0.128 Sum_probs=106.2
Q ss_pred ceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEE------------------ecCCeEEeecceE-E-ecCCCeEEEE
Q psy12131 11 ESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNV------------------IYPPEVSVEKQWI-H-TAPDMRAEII 70 (245)
Q Consensus 11 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v------------------~~~p~~~~~~~~~-~-~~~g~~~~l~ 70 (245)
+.|.|.+++.+| |.|+|.|.|..+. ......+.+ ..+|.+...+... . +..|+.+.|.
T Consensus 184 s~L~i~~~~~~d-g~Y~C~a~n~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~~~L~ 261 (444)
T 1igt_B 184 SSVTVTSSTWPS-QSITCNVAHPASS-TKVDKKIEPRGPTIKPCPPCKCPAPNLLGGPSVFIFPPKIKDVLMISLSPIVT 261 (444)
T ss_dssp EEEEECSTTTTT-SCCEEEEEETTTT-EEEEEECCCCCCSCCCCCCCSCCCSCCCCCCEEEEECCCHHHHHCTTSCCEEE
T ss_pred EEEEEchhhcCC-CeEEEEEEeCCCC-cceEEEeccCCCCcccCCccccCCcccCCCceEEecCCchhheeecCCCcEEE
Confidence 459999999999 9999999998876 333333322 1256553333222 2 4789999999
Q ss_pred EEEeecC----CCeEEEEECCEEeccCCcE--EEEecC---ceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEE---
Q psy12131 71 CNVYANP----PAKVEWFRDGTAITLGGRI--DMHVSS---EKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLS--- 138 (245)
Q Consensus 71 C~~~~~~----~~~~~w~~~~~~~~~~~~~--~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~--- 138 (245)
|.+.|.+ .+.+.|++++..+...... .....+ ..+.|.|.++..+|.|.|.|.|.|..+.......+.
T Consensus 262 C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~ 341 (444)
T 1igt_B 262 CVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDLPAPIERTISKPK 341 (444)
T ss_dssp EEEEEECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECTTCSSCEEEEEECCC
T ss_pred EEEeecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcCCCCCceEEEEeccC
Confidence 9999884 3599999999877543211 111111 245799999999999999999999987653322332
Q ss_pred ecCCCCccccC---ccccCCCeeEEEEEeCCC-CCceEEEEEEEee
Q psy12131 139 GIPNIPVFQKS---SRRLGPDGYRLVWQVDTY-SGIIQYLLKFRER 180 (245)
Q Consensus 139 ~~~~~p~~~~~---~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~ 180 (245)
....+|.+... .....+..+.|.|.+.+. ++... ..|+++.
T Consensus 342 ~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~-v~W~k~g 386 (444)
T 1igt_B 342 GSVRAPQVYVLPPPEEEMTKKQVTLTCMVTDFMPEDIY-VEWTNNG 386 (444)
T ss_dssp CCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCE-EEEEETT
T ss_pred CCCCCCEEEEeCCChHHccCCeEEEEEEEEeeeCCCCE-EEEEECC
Confidence 22334443221 112334459999999663 33222 3355553
No 176
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.76 E-value=1.1e-16 Score=126.95 Aligned_cols=154 Identities=12% Similarity=0.052 Sum_probs=98.8
Q ss_pred eEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEe------------------cCCeEEee-cceEEecCCCeEEEEEE
Q psy12131 12 SLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVI------------------YPPEVSVE-KQWIHTAPDMRAEIICN 72 (245)
Q Consensus 12 ~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~------------------~~p~~~~~-~~~~~~~~g~~~~l~C~ 72 (245)
.|.|..+..+|+|.|+|.|.|..+......+.|.|. .+|.+... +....+.+|+.+.|.|.
T Consensus 191 ~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~v~l~V~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~G~~v~L~C~ 270 (475)
T 1iga_A 191 QLTLPATQCLAGKSVTCHVKHYTNPSQDVTVPCPVPSTPPTPSPSTPPTPSPSCCHPRLSLHRPALEDLLLGSEANLTCT 270 (475)
T ss_pred EEEechhHcCCCceEEEEEEECCCCceeeeEecccccCcccccccccccCCCCCCCcEEEEcCCChHHhccCCceEEEEE
Confidence 488999999999999999999876433444544331 24444222 22223578999999999
Q ss_pred EeecCC---CeEEEEECCEEeccCCc--EEEEecC---ceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEE--ecCC
Q psy12131 73 VYANPP---AKVEWFRDGTAITLGGR--IDMHVSS---EKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLS--GIPN 142 (245)
Q Consensus 73 ~~~~~~---~~~~w~~~~~~~~~~~~--~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~--~~~~ 142 (245)
+.|.++ +.+.| . +..+..... ......+ ..+.|.|..+...|.|.|+|.+.|..|.......+. ....
T Consensus 271 ~~g~~p~~~~~i~W-~-~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~ 348 (475)
T 1iga_A 271 LTGLRDASGVTFTW-T-PSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKTPLTATLSKSGNTF 348 (475)
T ss_pred EEcccCCCceEEEE-C-CCCcCCccccCceECCCCCEEEEEEEEEchHHhccCCcEEEEEEcCCCCCceEEEeecCCCCC
Confidence 998754 58999 4 333321111 0111011 245799999999999999999999988754433442 2234
Q ss_pred CCccccCc----cccCCCeeEEEEEeCCC
Q psy12131 143 IPVFQKSS----RRLGPDGYRLVWQVDTY 167 (245)
Q Consensus 143 ~p~~~~~~----~~~~~~~~~l~~~~~~~ 167 (245)
+|.+.... ....+..+.|.|.+.+.
T Consensus 349 ~P~v~~~~~~~~~v~~g~~~~L~C~~~g~ 377 (475)
T 1iga_A 349 RPEVHLLPPPSEELALNELVTLTCLARGF 377 (475)
T ss_pred CCeEEEECCChHHhccCCceEEEEEEeee
Confidence 44432221 13467789999999664
No 177
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.75 E-value=1.8e-17 Score=114.25 Aligned_cols=116 Identities=14% Similarity=0.299 Sum_probs=86.6
Q ss_pred cceEEEeecceEEEeccCCCCCEEEEEEEEcCCCCc-eeeEEEEEEecC---CeEEeecceEEecCCCeEEEEEEEeecC
Q psy12131 2 KEIELLYNRESLDLDRVTLKLAGLYQCIASNNIGES-TSKNFIVNVIYP---PEVSVEKQWIHTAPDMRAEIICNVYANP 77 (245)
Q Consensus 2 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~~l~v~~~---p~~~~~~~~~~~~~g~~~~l~C~~~~~~ 77 (245)
+|+.+..++ +|.|.+++.+|+|.|+|.+.|..|.. ..+.+.|.|..+ |.+.. .+..+.|.|.+.+.|
T Consensus 58 ~R~~~~~ng-sL~I~~v~~~DsG~Y~c~~~n~~g~~~~~~~~~L~V~~~~~~P~i~~--------~~~~v~L~C~~~~~p 128 (182)
T 1hnf_A 58 DTYKLFKNG-TLKIKHLKTDDQDIYKVSIYDTKGKNVLEKIFDLKIQERVSKPKISW--------TCINTTLTCEVMNGT 128 (182)
T ss_dssp TTEEECTTS-CEEECSCCGGGCEEEEEEEEETTSCEEEEEEEEEEEECCCCCCEEEE--------ETTTTEEEEECSSCS
T ss_pred CeEEECCCC-CEEECCCChhhCEEEEEEEEeCCCceeEEEEEEEEEcCcCCCCEEEE--------ccCcEEEEeEccCCC
Confidence 577777655 59999999999999999999987764 246778888753 33322 233689999999888
Q ss_pred CCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEE
Q psy12131 78 PAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 137 (245)
Q Consensus 78 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~ 137 (245)
.+.+.|++++..+ ... ...+.+.. ...|.|.|+|.|.|..|.......+
T Consensus 129 ~~~~~W~~~g~~l-~~~---------~~~i~~~~-~~~d~G~Y~C~a~N~~~~~~s~~~~ 177 (182)
T 1hnf_A 129 DPELNLYQDGKHL-KLS---------QRVITHKW-TTSLSAKFKCTAGNKVSKESSVEPV 177 (182)
T ss_dssp SCEEEEEESSCEE-EEE---------SSCEEEEC-CSCEEEEEEEEEECSSCEEEEEEEE
T ss_pred CCEEEEEECCEEC-CCC---------CcEEEEec-ccCCCcEEEEEEEeCCCCcEEccee
Confidence 9999999999877 111 11233332 4678999999999999987766554
No 178
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.75 E-value=4e-16 Score=109.65 Aligned_cols=166 Identities=10% Similarity=0.040 Sum_probs=103.2
Q ss_pred EEecCCCeEEEEEEEeecCCCeEEEEECC-EEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEE
Q psy12131 59 IHTAPDMRAEIICNVYANPPAKVEWFRDG-TAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 137 (245)
Q Consensus 59 ~~~~~g~~~~l~C~~~~~~~~~~~w~~~~-~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~ 137 (245)
..+.+|+.+.|.|.+.|.|.|.+.|++.. ..+ ... ....+....|.|.++..+|.|.|.|.+.|..|.....+.|
T Consensus 11 ~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~--~~~--~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~l 86 (202)
T 1vca_A 11 YLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPL--NGK--VTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQV 86 (202)
T ss_dssp EEEETTSCEEEEEEEESCSSCEEEEEETTCCCC--SSE--EEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEE
T ss_pred EEEcCCCcEEEEEeecCCCCCeEEEECCCCCCc--cce--EEEcCCccEEEECcCCHHHCEEEEEEEEECCceEeeEEEE
Confidence 34458999999999999999999999843 211 111 1223345679999999999999999999998877776666
Q ss_pred Eec--CCCCccccCccccCCCeeEEEEEeCCCCCceEE-EEEEEeecCCCCeEEEeeCCC-CCCCcceeeeEEEecCCCC
Q psy12131 138 SGI--PNIPVFQKSSRRLGPDGYRLVWQVDTYSGIIQY-LLKFREREELTPWRNIVIPSD-GSLAGPIYTQSYNITGLQL 213 (245)
Q Consensus 138 ~~~--~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~l~~ 213 (245)
.+. |..+.+........|+.+.|.|.+.+..|.... ..|+++.. .......... ...........+.+.....
T Consensus 87 ~V~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~---~l~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 163 (202)
T 1vca_A 87 EIYSFPKDPEIHLSGPLEAGKPITVKCSVADVYPFDRLEIDLLKGDH---LMKSQEFLEDADRKSLETKSLEVTFTPVIE 163 (202)
T ss_dssp EEEBCCSCCEEEESSCEETTSCEEEEEEEEEEBSGGGEEEEEEETTE---EEEEEECCSCCSSCCCEEEEEEEEECCCGG
T ss_pred EEEeCCCCCEeCCceEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCe---ECcccccccccCcCcceEEEEEEEEEeeec
Confidence 654 333333333446788999999999665443222 23454432 1111111000 0000111234456666655
Q ss_pred CceEEEEEEEEecCCCCC
Q psy12131 214 FTQYEASVLAKNRFGWSR 231 (245)
Q Consensus 214 ~~~y~~~v~a~N~~G~~~ 231 (245)
.+...|+|.|.|.+|...
T Consensus 164 d~~g~ytC~A~n~~~~~~ 181 (202)
T 1vca_A 164 DIGKVLVCRAKLHIDEMD 181 (202)
T ss_dssp GTTCEEEEEEEECSCCCT
T ss_pred cCCCeEEEEEEccccCCC
Confidence 555566666999998753
No 179
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.75 E-value=2e-17 Score=117.19 Aligned_cols=133 Identities=18% Similarity=0.242 Sum_probs=92.9
Q ss_pred ceEEEee--cceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEe----cCCeEEeecceEEecCCCeEEEEEEEeec
Q psy12131 3 EIELLYN--RESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVI----YPPEVSVEKQWIHTAPDMRAEIICNVYAN 76 (245)
Q Consensus 3 ~~~~~~~--~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~ 76 (245)
|+.+... ...|.|.+++.+|+|.|+|.+.+..+........|.|. .+|.+...+.......|+.+.|.|.+.+.
T Consensus 63 r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~ 142 (212)
T 1q0x_L 63 RFSGSLIGDKAALTITGAQTEDEAIYFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPSSEELSTAKATLVCTITDF 142 (212)
T ss_dssp TEEEEEETTEEEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECCSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEE
T ss_pred cEEEEeeCCEEEEEECCCCccCCEEEEEEEecCchhhcCCCeEEEEecCCCCCCeeEEeCCCHHHccCCcEEEEEEEEEE
Confidence 5555432 34799999999999999999998765323344567774 46776654433334578999999999885
Q ss_pred CCC--eEEEEECCEEeccCCcEE--EEecC----ceeEEEEccCCCCCCeEEEEEEEeCCceeEEEE
Q psy12131 77 PPA--KVEWFRDGTAITLGGRID--MHVSS----EKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFI 135 (245)
Q Consensus 77 ~~~--~~~w~~~~~~~~~~~~~~--~~~~~----~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 135 (245)
+++ .+.|++++..+....... ..... ..+.|.|.....+|.|.|+|.+.|......+.+
T Consensus 143 ~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~v 209 (212)
T 1q0x_L 143 YPGVVTVDWKVDGTPVTAGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSSNKTL 209 (212)
T ss_dssp BSSCCEEEEEETTEEECTTEEECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEEEEEE
T ss_pred eCCCeEEEEEECCEeCCCCeecCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcceeeee
Confidence 443 899999998876542110 11111 124688888888899999999999876654443
No 180
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.75 E-value=8.2e-18 Score=116.63 Aligned_cols=116 Identities=14% Similarity=0.175 Sum_probs=88.8
Q ss_pred eecceEEEeccCCCCCEEEEEEEEcCCCC-ceeeEEEEEEec---CCeEEeecceEEecCCCeEEEEEEEeecCCCeEEE
Q psy12131 8 YNRESLDLDRVTLKLAGLYQCIASNNIGE-STSKNFIVNVIY---PPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEW 83 (245)
Q Consensus 8 ~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w 83 (245)
.++..|.|.+++.+|+|.|+|.+.|..|. ..+..+.|.|.. +|.+...+ ...+.+|+.+.|.|.+.+. .+.+.|
T Consensus 49 ~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~i~~~p-~~~v~~G~~v~l~C~~~~~-~~~~~w 126 (184)
T 2gi7_A 49 QDQAVLFIPAMKRSLAGRYRCSYQNGSLWSLPSDQLELVATGVFAKPSLSAQP-GPAVSSGGDVTLQCQTRYG-FDQFAL 126 (184)
T ss_dssp ESSSEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEEEEESSSCCCEEEEEC-CCSSCCTTCEEEEEECSSC-CCEEEE
T ss_pred CcccEEEECcCChhhCceEEEEEEcCCCccCCCCCEEEEecCcCCCCEEEeCC-CceecCCCcEEEEEEcCCC-CcEEEE
Confidence 34567999999999999999999997653 245677888853 56666555 3457789999999998754 469999
Q ss_pred EECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCc
Q psy12131 84 FRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLG 129 (245)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g 129 (245)
++++..+....... .....|.|.++..+|.|.|+|.+.|..+
T Consensus 127 ~k~g~~~~~~~~~~----~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 127 YKEGDPAPYKNPER----WYRASFPIITVTAAHSGTYRCYSFSSRD 168 (184)
T ss_dssp EECCCCTTSCCCCE----EEEESSSEEEETTCCSEEEEEEEECTTS
T ss_pred EECCCcCcceecCC----CceEEEEEccCCccCCeEEEEEEEeCCC
Confidence 99988765432211 1345788999999999999999999753
No 181
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.75 E-value=2e-17 Score=115.00 Aligned_cols=176 Identities=13% Similarity=0.102 Sum_probs=113.7
Q ss_pred CCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEecc--CCcEEEEecCceeEEEEccCCCCCCeEEEEEEEe
Q psy12131 49 PPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITL--GGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASN 126 (245)
Q Consensus 49 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~--~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 126 (245)
+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ..++.... ...|.|.++...|.|.|+|.+.+
T Consensus 2 ~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~~~~ 78 (189)
T 2v5t_A 2 MLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLA---NNNLQILNINKSDEGIYRCEGRV 78 (189)
T ss_dssp CCEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECT---TSCEEETTCCGGGCEEEEEEEEE
T ss_pred CceeeccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEec---CCCEEEeeCCHhHCcEEEEEEEE
Confidence 46666667777889999999999999999999999998877653 33443322 34699999999999999999999
Q ss_pred CCceeE--EEEEEEecCCCCcccc----CccccCCCeeEEEEEeCCCCCceEEEEEEEeec--CCCCeEEEeeCCCCCCC
Q psy12131 127 NLGSSQ--QFIQLSGIPNIPVFQK----SSRRLGPDGYRLVWQVDTYSGIIQYLLKFRERE--ELTPWRNIVIPSDGSLA 198 (245)
Q Consensus 127 ~~g~~~--~~~~~~~~~~~p~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 198 (245)
..+... ..+.+.+...|..... ......+..+.|.|.+.+.++. .+ .|+++.. ........ ....
T Consensus 79 ~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~-~v-~W~~~g~~~~~~~~~~~--~~~~--- 151 (189)
T 2v5t_A 79 EARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEP-AI-SWFRNGKLIEENEKYIL--KGSN--- 151 (189)
T ss_dssp TTTTEEEEEEEEEEEEEEEEEECSCCEEEEETTSCCCEEEECEEEEESCC-EE-EEEETTEECCCSSSEEE--ETTT---
T ss_pred cCCCceEEEEEEEEecCCCCcccccccccccccCCCcEEEEEEEccCCCC-eE-EEEECCEECcCCCcEEE--ecCC---
Confidence 864322 3333333221111111 1234568899999999665433 23 3455433 11111111 1111
Q ss_pred cceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceEEe
Q psy12131 199 GPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYVFA 239 (245)
Q Consensus 199 ~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~~ 239 (245)
..+.|.++...+.+.|+|.|.|..|....+..+.+.
T Consensus 152 -----~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 187 (189)
T 2v5t_A 152 -----TELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVF 187 (189)
T ss_dssp -----TEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred -----CEEEEcCCChhhCeeEEEEEEeCCCceeEEEEEEEE
Confidence 468899999999999999999999987766655543
No 182
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.75 E-value=1.3e-17 Score=118.05 Aligned_cols=129 Identities=19% Similarity=0.192 Sum_probs=90.9
Q ss_pred cceEEEee--cceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEec---CCeEEeecceEEecCCCeEEEEEEEeec
Q psy12131 2 KEIELLYN--RESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIY---PPEVSVEKQWIHTAPDMRAEIICNVYAN 76 (245)
Q Consensus 2 ~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~ 76 (245)
+|+.+... ...|.|.+++.+|+|.|+|.+.+..+........|.|.. +|.+...+....+..|+.+.|.|.+.|.
T Consensus 59 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~ 138 (210)
T 1lk3_L 59 ARFSGSGSGTDFTLTIDPVEADDTAIYFCQQSWNGPLTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNF 138 (210)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEE
T ss_pred ccEEEEecCCEEEEEECCCCHHHCeEEEEEEEcCCCceeCCCEEEEEcCCCcCCeEEEECCchhhccCCcEEEEEEEEeE
Confidence 35555532 247999999999999999999987664333345677765 5776654433334579999999999874
Q ss_pred -CCC-eEEEEECCEEeccC-Cc-EEEEecC-----ceeEEEEccCCCCCCeEEEEEEEeCCce
Q psy12131 77 -PPA-KVEWFRDGTAITLG-GR-IDMHVSS-----EKHSLLVRHIKDTDFGNYMCQASNNLGS 130 (245)
Q Consensus 77 -~~~-~~~w~~~~~~~~~~-~~-~~~~~~~-----~~~~l~i~~~~~~d~g~y~C~~~n~~g~ 130 (245)
|.+ .+.|++++..+... .. ....... ..+.|.|..+..+|.|.|+|.+.|....
T Consensus 139 ~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (210)
T 1lk3_L 139 YPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSS 201 (210)
T ss_dssp BSSCCEEEEEETTEECCTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCS
T ss_pred eCCceEEEEEeCCccCCCCceEccCCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCC
Confidence 444 89999999887654 11 0011111 1247899999999999999999997653
No 183
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.75 E-value=3.3e-17 Score=115.25 Aligned_cols=172 Identities=10% Similarity=0.021 Sum_probs=106.7
Q ss_pred cceEEecCCCeEEEEEEEeecCC-----CeEEEEE-CCEEeccCCcEEEEecC---ceeEEEEccCCCCCCeEEEEEEEe
Q psy12131 56 KQWIHTAPDMRAEIICNVYANPP-----AKVEWFR-DGTAITLGGRIDMHVSS---EKHSLLVRHIKDTDFGNYMCQASN 126 (245)
Q Consensus 56 ~~~~~~~~g~~~~l~C~~~~~~~-----~~~~w~~-~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n 126 (245)
+..+.+.+|+.+.|.|.+.+.|. +.+.|++ ++.......+..+.... ....|.|.++..+|.|.|.|.+.|
T Consensus 9 ~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 88 (202)
T 3bp6_B 9 KEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVIC 88 (202)
T ss_dssp CSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEEe
Confidence 34567889999999999998876 7999999 44444444455443321 357899999999999999999999
Q ss_pred CCceeEEEEEEEecCC--CCccccCccccCCCeeEEEEEeCCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeee
Q psy12131 127 NLGSSQQFIQLSGIPN--IPVFQKSSRRLGPDGYRLVWQVDTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQ 204 (245)
Q Consensus 127 ~~g~~~~~~~~~~~~~--~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (245)
..+.....+.|.+... .|.... .....+..+.|.|.+.+.+.. .+ .|++... ...........+ . ..
T Consensus 89 ~~~~~~~~~~l~V~~~~~~p~~~~-~~~~~g~~v~l~C~~~g~P~p-~v-~W~~~~~--~~~~~~~~~~~~----~--~~ 157 (202)
T 3bp6_B 89 GAAWDYKYLTVKVKASYMRIDTRI-LEVPGTGEVQLTCQARGYPLA-EV-SWQNVSV--PANTSHIRTPEG----L--YQ 157 (202)
T ss_dssp TTEEEEEEEEEEEEBCCCCEEEEE-EECTTTCCEEEEEEEEEBSCC-EE-EETTCCS--CCEEEEEECTTS----C--EE
T ss_pred CCCcceEEEEEEecCCCCcccEEE-EecCCCCeEEEEEEccccCCc-eE-EEEeCCC--CccCceeeCCCC----C--EE
Confidence 9987777777766533 232222 134578899999999664332 22 2333321 111112111111 1 12
Q ss_pred EEEecCCCCCceEEEEEEEEecCCCCCCCcceEE
Q psy12131 205 SYNITGLQLFTQYEASVLAKNRFGWSRPSKAYVF 238 (245)
Q Consensus 205 ~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~ 238 (245)
.+.+..+...+.+.|.|.|.|..|....+..+.+
T Consensus 158 ~~~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v 191 (202)
T 3bp6_B 158 VTSVLRLKPQPSRNFSCMFWNAHMKELTSAIIDP 191 (202)
T ss_dssp EEEEEEECCCTTCCEEEEEEETTTTEEEEEEECC
T ss_pred EEEEEEEEcCCCCEEEEEEEcCCcccccEEEEEe
Confidence 2333344445555666669999997765555444
No 184
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.75 E-value=9.4e-17 Score=110.33 Aligned_cols=155 Identities=14% Similarity=0.128 Sum_probs=109.8
Q ss_pred cCCeEEeecceEEecCCCeEEEEEEEeecCCCe-EEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEe
Q psy12131 48 YPPEVSVEKQWIHTAPDMRAEIICNVYANPPAK-VEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASN 126 (245)
Q Consensus 48 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~-~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 126 (245)
.+|.+...+....+.+|+.+.|.|.+.+.|.+. +.|++++..+.. ....|.|.++..+|.|.|+|.+.|
T Consensus 6 ~~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~----------~~~~L~i~~~~~~d~G~Y~C~~~n 75 (175)
T 1fnl_A 6 PKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISS----------QASSYFIDAATVNDSGEYRCQTNL 75 (175)
T ss_dssp CCCEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEES----------SCSEEEESSCCGGGCEEEEEECSS
T ss_pred CCCEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccC----------CceEEEEeCCCcccCEEEEEEeeC
Confidence 356676777666788999999999999888776 889999987664 234799999999999999999999
Q ss_pred CCceeEEEEEEEecCCCCccccC-ccccCCCeeEEEEEeCCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeE
Q psy12131 127 NLGSSQQFIQLSGIPNIPVFQKS-SRRLGPDGYRLVWQVDTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQS 205 (245)
Q Consensus 127 ~~g~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (245)
..+.....+.+. +.++..... .....++.+.|.|...+++|...+. |+++.. ... ... ....
T Consensus 76 ~~~s~~~~l~V~--~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~-W~k~g~---~~~-~~~----------~~~~ 138 (175)
T 1fnl_A 76 STLSDPVQLEVH--IGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVT-YLQNGK---DRK-YFH----------HNSD 138 (175)
T ss_dssp SCCCCCEEEEEE--CSSEEEECSCSEEETTCCEEEEEEECTTCCCEEEE-EEETTE---EEE-EEE----------ECCC
T ss_pred CcccccEEEEEe--CCCceeeCCCceecCCCCEEEEEEcCCCCCceEEE-EEECCe---Ecc-CCC----------CCCE
Confidence 766544444444 333322221 3345789999999997765543333 555432 111 110 1156
Q ss_pred EEecCCCCCceEEEEEEEEecCCC
Q psy12131 206 YNITGLQLFTQYEASVLAKNRFGW 229 (245)
Q Consensus 206 ~~i~~l~~~~~y~~~v~a~N~~G~ 229 (245)
+.|.++...+.+.|+|.|.|..|.
T Consensus 139 L~i~~v~~~d~G~Y~C~a~n~~~~ 162 (175)
T 1fnl_A 139 FHIPKATLKDSGSYFCRGLVGSKN 162 (175)
T ss_dssp EEESSCCGGGCEEEEEEEEETTEE
T ss_pred EEEcccChhhCeEEEEEEEcCCCC
Confidence 889999999999999999998664
No 185
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.75 E-value=9.3e-18 Score=118.87 Aligned_cols=135 Identities=14% Similarity=0.164 Sum_probs=97.6
Q ss_pred cceEEEe--ecceEEEeccCCCCCEEEEEEEEcCCC-CceeeEEEEEEe----cCCeEEeecceEEecCCCeEEEEEEEe
Q psy12131 2 KEIELLY--NRESLDLDRVTLKLAGLYQCIASNNIG-ESTSKNFIVNVI----YPPEVSVEKQWIHTAPDMRAEIICNVY 74 (245)
Q Consensus 2 ~~~~~~~--~~~~L~i~~~~~~d~G~Y~C~~~~~~~-~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~ 74 (245)
+|+.+.. +..+|.|.+++.+|+|.|+|.+.+..+ ......+.|.|. .+|.+...+....+..|+.+.|.|.+.
T Consensus 57 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~ 136 (211)
T 3tv3_L 57 DRFSGSKSGNTASLTVSGLQTDDEAVYYCGSLVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLIS 136 (211)
T ss_dssp TTEEEEEETTEEEEEEESCCGGGCEEEEEEEEETTTEEEECCCEEEEECCSCCBCCEEEEECCCHHHHHTTCEEEEEEEE
T ss_pred CcEEEEccCCEEEEEECCCChhHCEEEEEEEecCCCceeECCCceEEEeCCCCcCCeeEecCCchhhhcCCCeEEEEEee
Confidence 3555443 234699999999999999999999877 234566778887 577776665444445799999999999
Q ss_pred ecC--CCeEEEEECCEEeccCCcEE--EEecCc----eeEEEEccCCCCCCeEEEEEEEeCCceeEEEEE
Q psy12131 75 ANP--PAKVEWFRDGTAITLGGRID--MHVSSE----KHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQ 136 (245)
Q Consensus 75 ~~~--~~~~~w~~~~~~~~~~~~~~--~~~~~~----~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 136 (245)
+.+ .+.+.|++++..+....... ...... .+.|.|..+...|.|.|+|.+.|..+...+.+.
T Consensus 137 g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~~~ 206 (211)
T 3tv3_L 137 DFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVA 206 (211)
T ss_dssp EEBSSCCEEEEEETTEEECTTEEECCCEECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEEEEC
T ss_pred eecCCCeEEEEEECCeecCCCcccCCceECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEeecc
Confidence 853 47899999998875421110 111111 246888888888999999999999877666553
No 186
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.75 E-value=3.3e-17 Score=120.26 Aligned_cols=132 Identities=22% Similarity=0.282 Sum_probs=93.4
Q ss_pred ceEEEeccCCCCCEEEEEEEEcCCCCc-eeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEE---eecCCCeEEEEEC
Q psy12131 11 ESLDLDRVTLKLAGLYQCIASNNIGES-TSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNV---YANPPAKVEWFRD 86 (245)
Q Consensus 11 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~---~~~~~~~~~w~~~ 86 (245)
.+|.|.+++.+|+|.|+|.+.+..+.. ....+.|.|. |. .+....+..|+.+.|.|.+ .+.|.+.+.|+++
T Consensus 84 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~--~~---~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~ 158 (268)
T 3mj6_A 84 GSLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVL--PE---EPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFS 158 (268)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEE--CC---CCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEE
T ss_pred EEEEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEe--cc---CCCccccccCCcEEEEEEecCCCCCCccceEEEec
Confidence 669999999999999999999875543 4455666664 21 3345678899999999999 5668889999983
Q ss_pred -CEEecc-----------------C----CcEEEEe--cCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEecCC
Q psy12131 87 -GTAITL-----------------G----GRIDMHV--SSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIPN 142 (245)
Q Consensus 87 -~~~~~~-----------------~----~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~~ 142 (245)
+..... . .+..+.. ......|.|.++..+|.|.|+|.+.|..|.....+.|.+...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~ 238 (268)
T 3mj6_A 159 SGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQD 238 (268)
T ss_dssp CTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEEEcC
Confidence 321100 0 0111100 123568999999999999999999999999888888888655
Q ss_pred CCccc
Q psy12131 143 IPVFQ 147 (245)
Q Consensus 143 ~p~~~ 147 (245)
+|.+.
T Consensus 239 ~p~~~ 243 (268)
T 3mj6_A 239 EFQRT 243 (268)
T ss_dssp -----
T ss_pred CCeee
Confidence 55443
No 187
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.74 E-value=5.8e-17 Score=118.24 Aligned_cols=127 Identities=17% Similarity=0.290 Sum_probs=95.2
Q ss_pred cceEEEee----cceEEEeccCCCCCEEEEEEEEcC-----------CCCceeeEEEEEEec---------------CCe
Q psy12131 2 KEIELLYN----RESLDLDRVTLKLAGLYQCIASNN-----------IGESTSKNFIVNVIY---------------PPE 51 (245)
Q Consensus 2 ~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~~~-----------~~~~~~~~~~l~v~~---------------~p~ 51 (245)
+|+++..+ ..+|.|.+++.+|+|.|.|.+.+. ..........|.|.. +|.
T Consensus 72 ~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~ 151 (256)
T 3juy_B 72 DRVTFTADTSANTAYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIV 151 (256)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCC
T ss_pred ceEEEEEecCCCEEEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeE
Confidence 46777643 245999999999999999999986 111134456678876 345
Q ss_pred EEeecceEEecCCCeEEEEEEEeecCC-CeEEEEEC--CEEec------------cCCcEEEEecCceeEEEEccCCCCC
Q psy12131 52 VSVEKQWIHTAPDMRAEIICNVYANPP-AKVEWFRD--GTAIT------------LGGRIDMHVSSEKHSLLVRHIKDTD 116 (245)
Q Consensus 52 ~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~~~w~~~--~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d 116 (245)
+...+....+.+|+.+.|.|.+.+.+. +.+.|++. +.... ...++.+...+....|.|.++..+|
T Consensus 152 ~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 231 (256)
T 3juy_B 152 LTQAPGTLSLSPGERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPED 231 (256)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred EEecCCeEEEeCCCCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhH
Confidence 666677888899999999999998776 89999982 22111 2345555555566789999999999
Q ss_pred CeEEEEEEEeCC
Q psy12131 117 FGNYMCQASNNL 128 (245)
Q Consensus 117 ~g~y~C~~~n~~ 128 (245)
.|.|.|.+.|..
T Consensus 232 sG~Y~C~~~~~~ 243 (256)
T 3juy_B 232 FALYYCQVYGAS 243 (256)
T ss_dssp CSEEEEEECCSS
T ss_pred CEEEEEEEeeCC
Confidence 999999999854
No 188
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.74 E-value=1.3e-17 Score=118.99 Aligned_cols=131 Identities=21% Similarity=0.237 Sum_probs=93.7
Q ss_pred cceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecC---CeEEeecceEEecCCCeEEEEEEE-eecCCCeEEEEE
Q psy12131 10 RESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYP---PEVSVEKQWIHTAPDMRAEIICNV-YANPPAKVEWFR 85 (245)
Q Consensus 10 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~---p~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~~~w~~ 85 (245)
..+|.|.+++.+|+|.|+|.+.+.. . .+..+.|.|..+ |.+...+ ...+..|+.+.|.|.+ .+.|.+.+.|++
T Consensus 71 ~~sL~I~~v~~~D~G~Y~C~~~~~~-~-~~~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~~~l~C~~~~g~P~~~v~W~~ 147 (222)
T 4i0k_A 71 NASLRLQRVRVTDEGSYTCFVSIQD-F-DSAAVSLQVAAPYSKPSMTLEP-NKDLRPGNMVTITCSSYQGYPEAEVFWKD 147 (222)
T ss_dssp BCCEEECSCCGGGCSCEEEEEEECC-C-CCCCCCCCCCBCCCCCEEECCC------CCSEEEEEEEEEEEBSCCEEEEEC
T ss_pred eEEEEECCcccccCEEEEEEEEeCC-C-ceEEEEEEEEcCCCCCcEEeCC-CceecCCceEEEEEecccccCCCeEEEEc
Confidence 5669999999999999999999863 2 355666777654 5555444 3356789999999999 888999999998
Q ss_pred -CCEEeccCCcEEEEe--cCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEecCCC
Q psy12131 86 -DGTAITLGGRIDMHV--SSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIPNI 143 (245)
Q Consensus 86 -~~~~~~~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~~~ 143 (245)
++..+.......... .+.-..+.|.++..+|.|.|+|.+.|..|.....+.+.+...|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 208 (222)
T 4i0k_A 148 GQGVPLTGNVTTSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQP 208 (222)
T ss_dssp TTSCBCCSEEEEEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC--
T ss_pred CCCccCCCCcceeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEeCCc
Confidence 455443322222221 2222457888999999999999999999998888888876444
No 189
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.74 E-value=1.6e-17 Score=118.18 Aligned_cols=133 Identities=16% Similarity=0.256 Sum_probs=91.0
Q ss_pred ceEEEe--ecceEEEeccCCCCCEEEEEEEEcCCC---C-ceeeEEEEEEe----cCCeEEeecceEEecCCCeEEEEEE
Q psy12131 3 EIELLY--NRESLDLDRVTLKLAGLYQCIASNNIG---E-STSKNFIVNVI----YPPEVSVEKQWIHTAPDMRAEIICN 72 (245)
Q Consensus 3 ~~~~~~--~~~~L~i~~~~~~d~G~Y~C~~~~~~~---~-~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~ 72 (245)
|+.+.. +..+|.|.+++.+|+|.|+|.+.+..| . .....+.|.|. .+|.+...+.......|+.+.|.|.
T Consensus 65 r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C~ 144 (218)
T 3s96_B 65 RFSGSSSGADRYLSISNIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSSEELKENKATLVCL 144 (218)
T ss_dssp TEEEEEETTEEEEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCCHHHHHTTEEEEEEE
T ss_pred ceEEecCCceEEEEEccCCcccCEEEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCCcccccCCcEEEEEE
Confidence 555543 335699999999999999999998765 1 13445678887 4566665444444456789999999
Q ss_pred Eee-cCCC-eEEEEECCEEeccCCcEE--EEecCc---eeEEEEccCCCCCCeEEEEEEEeCCceeEEEE
Q psy12131 73 VYA-NPPA-KVEWFRDGTAITLGGRID--MHVSSE---KHSLLVRHIKDTDFGNYMCQASNNLGSSQQFI 135 (245)
Q Consensus 73 ~~~-~~~~-~~~w~~~~~~~~~~~~~~--~~~~~~---~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 135 (245)
+.+ .|.+ .+.|++++..+....... ....+. .+.|.|......|.|.|+|.+.|..+.....+
T Consensus 145 ~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~ 214 (218)
T 3s96_B 145 ISNFSPSGVTVAWKANGTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEKSL 214 (218)
T ss_dssp EEEEBSSCCEEEEEETTEEC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEEEEE
T ss_pred ECcccCCCeEEEEEECCEECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCcccccc
Confidence 988 5666 899999998876522110 000111 23477888877889999999999987665544
No 190
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.74 E-value=5.5e-18 Score=117.67 Aligned_cols=112 Identities=17% Similarity=0.284 Sum_probs=83.5
Q ss_pred ecceEEEec-cCCCCCEEEEEEEEcCCCCceeeEEEEEEec--CCeE----------------E----eecce---EEec
Q psy12131 9 NRESLDLDR-VTLKLAGLYQCIASNNIGESTSKNFIVNVIY--PPEV----------------S----VEKQW---IHTA 62 (245)
Q Consensus 9 ~~~~L~i~~-~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~--~p~~----------------~----~~~~~---~~~~ 62 (245)
.+.+|.|.+ ++.+|+|.|+|.|.|..|. .+..+.+.|.. +|.. . ..... ..+.
T Consensus 42 ~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (186)
T 1jbj_A 42 HDKHLVLQDFSEVEDSGYYVCYTPASNKN-TYLYLKARVGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSR 120 (186)
T ss_dssp CCSEEEEESCCTTTSCEEEEEECSSCCCC-CCEEECCCCCSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCS
T ss_pred CCCEEEECCCCccccCEEEEEEEEeCCCc-EEEEEEEEEecccccccccccccccccCCccccccccccccccccceecC
Confidence 355799999 9999999999999998876 45555554432 2210 0 00001 1234
Q ss_pred CCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCcee
Q psy12131 63 PDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSS 131 (245)
Q Consensus 63 ~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~ 131 (245)
.|+.+.|.|.+ |.|.+.|++++..+..... ....|.|.++..+|.|.|+|.|.|..|..
T Consensus 121 ~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~~-------~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 121 GDGSVLLTCGL---TDKTIKWLKDGSIISPLNA-------TKNTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp SSCEEEEECSS---SCSCEEEEETTEECCCSSC-------CSSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred CCCeEEEEeeC---CCCeEEEEECCEECcccCC-------CcceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 89999999998 7899999999998764322 34579999999999999999999998865
No 191
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.74 E-value=3.4e-17 Score=119.53 Aligned_cols=127 Identities=15% Similarity=0.262 Sum_probs=92.8
Q ss_pred cceEEEeec----ceEEEeccCCCCCEEEEEEEEcCCCC---ceeeEEEEEEecC--------------CeEEeecceEE
Q psy12131 2 KEIELLYNR----ESLDLDRVTLKLAGLYQCIASNNIGE---STSKNFIVNVIYP--------------PEVSVEKQWIH 60 (245)
Q Consensus 2 ~~~~~~~~~----~~L~i~~~~~~d~G~Y~C~~~~~~~~---~~~~~~~l~v~~~--------------p~~~~~~~~~~ 60 (245)
+|+.+..+. .+|.|.+++.+|+|.|+|.+.+..+. .....+.|.|..+ |.+...+....
T Consensus 73 ~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 152 (257)
T 3gkz_A 73 SRISITRDTSKNQVYLQLKSVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMS 152 (257)
T ss_dssp TTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEE
T ss_pred ccEEEEEecCCceEEEEECCCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEE
Confidence 466666433 36999999999999999999986221 1234566777754 55666667788
Q ss_pred ecCCCeEEEEEEEeecCCC-eEEEEEC--CEEec------------cCCcEEEEecCceeEEEEccCCCCCCeEEEEEEE
Q psy12131 61 TAPDMRAEIICNVYANPPA-KVEWFRD--GTAIT------------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQAS 125 (245)
Q Consensus 61 ~~~g~~~~l~C~~~~~~~~-~~~w~~~--~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 125 (245)
+.+|+.+.|.|.+.+.+.+ .+.|++. +.... ...++..........|.|.++..+|.|.|.|.+.
T Consensus 153 v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 232 (257)
T 3gkz_A 153 ASPGEKVTLTCSASSSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQW 232 (257)
T ss_dssp ECTTCCEEEEEEESSCCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEC
T ss_pred EeCCCcEEEEEEEccCccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEEEEc
Confidence 8999999999999988877 8999983 22111 0234555444556789999999999999999998
Q ss_pred eCC
Q psy12131 126 NNL 128 (245)
Q Consensus 126 n~~ 128 (245)
+..
T Consensus 233 ~~~ 235 (257)
T 3gkz_A 233 SSF 235 (257)
T ss_dssp SSS
T ss_pred cCC
Confidence 754
No 192
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.74 E-value=6.2e-17 Score=114.63 Aligned_cols=173 Identities=15% Similarity=0.181 Sum_probs=114.6
Q ss_pred cceEEecCCCeEEEEEEEeecC----CCeEEEEE----------------CCEEecc-----CCcEEEEe---cCceeEE
Q psy12131 56 KQWIHTAPDMRAEIICNVYANP----PAKVEWFR----------------DGTAITL-----GGRIDMHV---SSEKHSL 107 (245)
Q Consensus 56 ~~~~~~~~g~~~~l~C~~~~~~----~~~~~w~~----------------~~~~~~~-----~~~~~~~~---~~~~~~l 107 (245)
+..+.+.+|+.+.|.|.+.+.+ .+.+.|++ ++..... ..+..+.. ......|
T Consensus 7 ~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L 86 (214)
T 3jz7_A 7 EQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASI 86 (214)
T ss_dssp EEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCE
T ss_pred CceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccE
Confidence 3466788999999999998876 46999987 3333321 22333321 1235679
Q ss_pred EEccCCCCCCeEEEEEEEeCCceeEEEEEEEecCCC--CccccCccccCCCeeEEEEEe-CCCCCceEEEEEEEeecCCC
Q psy12131 108 LVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIPNI--PVFQKSSRRLGPDGYRLVWQV-DTYSGIIQYLLKFREREELT 184 (245)
Q Consensus 108 ~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~~~--p~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~ 184 (245)
.|.++..+|.|.|.|.+.|..|.....+.|.+...| +..........+..+.|.|.+ .+.++ ..+ .|++... ..
T Consensus 87 ~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~-~~v-~W~~~~~-~~ 163 (214)
T 3jz7_A 87 NVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLP-LQF-EWQKLSD-SQ 163 (214)
T ss_dssp EECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSCEEEEESCCBTTCCEEEEEECSBCCSS-CEE-EEEECST-TC
T ss_pred EEccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCceeeeecceecCCcEEEEecCCCCCCC-CEE-EEEECCC-CC
Confidence 999999999999999999998877777776665333 222222345678899999999 55543 233 3555322 11
Q ss_pred CeE-EEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceEEe
Q psy12131 185 PWR-NIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYVFA 239 (245)
Q Consensus 185 ~~~-~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~~ 239 (245)
... ....... ...+.|.++...+.+.|+|.|.|..|....+..+.+.
T Consensus 164 ~~~~~~~~~~~--------~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 211 (214)
T 3jz7_A 164 TMPTPWLAEMT--------SPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVV 211 (214)
T ss_dssp CCCGGGGGGTT--------SSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCB
T ss_pred ccCccceeccC--------CCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEe
Confidence 100 0000011 1478899999999999999999999987665555554
No 193
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.74 E-value=4.5e-17 Score=116.27 Aligned_cols=133 Identities=14% Similarity=0.103 Sum_probs=91.9
Q ss_pred cceEEEee----cceEEEeccCCCCCEEEEEEEEcCCCC----ceeeEEEEEEec----CCeEEeecceEEecCCCeEEE
Q psy12131 2 KEIELLYN----RESLDLDRVTLKLAGLYQCIASNNIGE----STSKNFIVNVIY----PPEVSVEKQWIHTAPDMRAEI 69 (245)
Q Consensus 2 ~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~~~~~~----~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l 69 (245)
+|+++..+ ..+|.|.+++.+|+|.|+|.+.+..+. .......|.|.. +|.+...+....+..|+.+.|
T Consensus 68 ~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L 147 (222)
T 1q9r_B 68 GRFTISRDNSQSILYLQMNTLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTL 147 (222)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCCSCCCCSSEEEE
T ss_pred CceEEEEECCCCeEEEEECcCCcccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccccccccCCCcEEE
Confidence 46777653 347999999999999999999986541 122345677764 455554433333567999999
Q ss_pred EEEEeec-CCC-eEEEEECCEEeccCCcEEEEecC---ceeEEEEccCCCCCCeEEEEEEEeCCceeEEEE
Q psy12131 70 ICNVYAN-PPA-KVEWFRDGTAITLGGRIDMHVSS---EKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFI 135 (245)
Q Consensus 70 ~C~~~~~-~~~-~~~w~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 135 (245)
.|.+.|. |.| .+.|++++..+...........+ ..+.|.|..+...| |.|+|.|.|..|......
T Consensus 148 ~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~~ 217 (222)
T 1q9r_B 148 GCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDK 217 (222)
T ss_dssp EEEEEEEBSSCCEEEEGGGTBCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEE
T ss_pred EEEEccEECCCCEEEEecCCeEcceEeccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcEEE
Confidence 9999985 888 99999988654321111111111 12468898888889 999999999988655443
No 194
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.74 E-value=5.2e-18 Score=127.06 Aligned_cols=127 Identities=23% Similarity=0.295 Sum_probs=100.4
Q ss_pred ceEEEeccCCCCCEEEEEEEEcCCCCc-eeeEEEEEEecCCeEEeec-ceEEecCCCeEEEEEEEeecCCC-eEEEEECC
Q psy12131 11 ESLDLDRVTLKLAGLYQCIASNNIGES-TSKNFIVNVIYPPEVSVEK-QWIHTAPDMRAEIICNVYANPPA-KVEWFRDG 87 (245)
Q Consensus 11 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~~l~v~~~p~~~~~~-~~~~~~~g~~~~l~C~~~~~~~~-~~~w~~~~ 87 (245)
+.|.|.++..+|.|.|+|.|.|..+.. ....+.|.|..+|.+...+ ....+..|+.+.|.|.+.|.|.| .+.|++++
T Consensus 172 s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~ 251 (308)
T 4fom_A 172 SQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAPEVSVTGYDGNWFVGRKGVNLKCNADANPPPFKSVWSRLD 251 (308)
T ss_dssp EEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEEEEECCBCCCSCEETTCCSCEEECCEEEESCEEEEECCBSS
T ss_pred ccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecCCeeEEcccceeeeeccccEEEEEEEecCCCCcEEEEEECC
Confidence 459999999999999999999987653 4566777788888876543 33456678999999999999988 69999988
Q ss_pred EEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEecCC
Q psy12131 88 TAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIPN 142 (245)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~~~ 142 (245)
..+..... ......+.|..+..+|.|.|+|.|.|..|.....+.|.+...
T Consensus 252 ~~~~~~~~-----~~~~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~~~l~V~~~ 301 (308)
T 4fom_A 252 GQWPDGLL-----ASDNTLHFVHPLTFNYSGVYICKVTNSLGQRSDQKVIYISDP 301 (308)
T ss_dssp SCCCSSCB-----CSTTEEECCSCCCSCCCSEEEEEEEETTEEEEEEEECCEECC
T ss_pred eECCCcEE-----EcCCeEEEECCCChhhCEEEEEEEEeCCCcEEEEEEEEEEcC
Confidence 76654321 113345678899999999999999999999888888776643
No 195
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.73 E-value=9.6e-17 Score=116.50 Aligned_cols=127 Identities=14% Similarity=0.169 Sum_probs=86.1
Q ss_pred ceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEee-cCCC-eEEEEECCE
Q psy12131 11 ESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYA-NPPA-KVEWFRDGT 88 (245)
Q Consensus 11 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~-~~~w~~~~~ 88 (245)
.+|.|.+++.+|+|.|+|.+.+..+. ....+.|.|..+|.+...+.. ....|..+.|.|.+.+ .|.| .+.|++++.
T Consensus 82 ~sL~I~~v~~~D~G~Y~C~~~~~~~~-~~~~~~L~V~~~P~v~~~~~~-~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~ 159 (248)
T 3pv7_A 82 ASLRLPGIQLEEAGEYRCEVVVTPLK-AQGTVQLEVVASPASRLLLDQ-VGMKENEDKYMCESSGFYPEAINITWEKQTQ 159 (248)
T ss_dssp CCEEESSCCGGGCEEEEEEEEETTEE-EEEEEEEEEEBCCEEEEECC---------CEEEEEEEEEBSSCCEEEEEEECS
T ss_pred EEEEeCCCCHHHCeEEEEEEEeCCcc-ceeEEEEEEecCCceEEecCC-ccccCCCcEEEEEEccEECCCeEEEEEECCc
Confidence 34999999999999999999998765 677889999999998776653 3456778889999998 7888 999999885
Q ss_pred EeccC------Cc-EEEEec--C---ceeEEEEccCCCCCCeEEEEEEEeCCceeEE--EEEEEe
Q psy12131 89 AITLG------GR-IDMHVS--S---EKHSLLVRHIKDTDFGNYMCQASNNLGSSQQ--FIQLSG 139 (245)
Q Consensus 89 ~~~~~------~~-~~~~~~--~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~--~~~~~~ 139 (245)
.+... .. ...... + ..+.|.+......|.|.|+|.+.|..+.... .+.|.+
T Consensus 160 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~V 224 (248)
T 3pv7_A 160 KFPHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTA 224 (248)
T ss_dssp SSCSCEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC--
T ss_pred cCCCccccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEEE
Confidence 33211 00 001111 1 1346788888888999999999998876433 444444
No 196
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.73 E-value=3.3e-16 Score=111.38 Aligned_cols=180 Identities=12% Similarity=0.060 Sum_probs=113.5
Q ss_pred cCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCcee--EEEEccCCCCCCeEEEEEEE
Q psy12131 48 YPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKH--SLLVRHIKDTDFGNYMCQAS 125 (245)
Q Consensus 48 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~--~l~i~~~~~~d~g~y~C~~~ 125 (245)
.+|.+...+. ..+.+|++++|.|.+.+ +.+.+.|++++..+..... ......... .|.|.++..+|.|.|.|.+.
T Consensus 8 ~~P~i~~~p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~-~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 84 (218)
T 1uct_A 8 PMPFISAKSS-PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIG-RRLKFWNETDPEFVIDHMDANKAGRYQCQYR 84 (218)
T ss_dssp CCCCEEESSC-SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECS-EECC----CCCEEEECSCCGGGCEEEEEEEE
T ss_pred CCCEEEecCC-CccCCCCCEEEEEEcCC-CCCEEEEEECCCccccccc-ccCCCCcceeeEEEEcccccccCEEEEEEEE
Confidence 4677766665 46789999999999986 6789999998765432211 111111234 79999999999999999999
Q ss_pred eCCceeE--EEEEEEec--CCCCcccc--CccccCCCeeEEEEEeCCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCc
Q psy12131 126 NNLGSSQ--QFIQLSGI--PNIPVFQK--SSRRLGPDGYRLVWQVDTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAG 199 (245)
Q Consensus 126 n~~g~~~--~~~~~~~~--~~~p~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (245)
|..|... ..+.+.+. +.+|.+.. ...+..|+.++|.|...+.++ ..| .|+++.. ...-... ....
T Consensus 85 n~~~~~~~s~~~~l~V~~~~~~P~i~~~p~~~v~~G~~v~L~C~~~~~~~-~~~-~W~k~g~-~~~~~~~-~~~~----- 155 (218)
T 1uct_A 85 IGHYRFRYSDTLELVVTGLYGKPFLSADRGLVLMPGENISLTCSSAHIPF-DRF-SLAKEGE-LSLPQHQ-SGEH----- 155 (218)
T ss_dssp ETTTEEEECCCEEEEEECSSCCCEEEESSCSEECTTCCCEEEEECSSSCC-SEE-EEEETTC-SSCCSEE-ECSS-----
T ss_pred cCCCceeecCCEEEEEcCcccCCEEEeCCCCccCCCCCEEEEEeCCCCCC-CEE-EEEECCC-ccccccc-CCCc-----
Confidence 9765322 23444433 33444322 234568899999996544333 234 3555543 1110111 1111
Q ss_pred ceeeeEEEecCCCCCceEEEEEEEEecC---CCCCCCcceEEecCC
Q psy12131 200 PIYTQSYNITGLQLFTQYEASVLAKNRF---GWSRPSKAYVFATEG 242 (245)
Q Consensus 200 ~~~~~~~~i~~l~~~~~y~~~v~a~N~~---G~~~~s~~~~~~t~~ 242 (245)
...|.|.++...+.+.|+|.|.|.. ..+..|..+.+...+
T Consensus 156 ---~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g 198 (218)
T 1uct_A 156 ---PANFSLGPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTD 198 (218)
T ss_dssp ---SEEEECCSCCGGGCEEEEEEEECTTSTTEECCCCCCEEEEEC-
T ss_pred ---cCEEEEccCCcccCEEEEEEEEcCCCCCcCCCCCCcEEEEEec
Confidence 1679999999999999999999874 346677776665543
No 197
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=99.73 E-value=9.3e-17 Score=120.59 Aligned_cols=175 Identities=15% Similarity=0.057 Sum_probs=115.8
Q ss_pred ceEEecCCCeEEEEEEEeec-----CCCeEEEEECCEEeccCCcEEEEecCc-eeEEEEccCCCCCCeEEEEEEEeCCce
Q psy12131 57 QWIHTAPDMRAEIICNVYAN-----PPAKVEWFRDGTAITLGGRIDMHVSSE-KHSLLVRHIKDTDFGNYMCQASNNLGS 130 (245)
Q Consensus 57 ~~~~~~~g~~~~l~C~~~~~-----~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~~l~i~~~~~~d~g~y~C~~~n~~g~ 130 (245)
....+..|.+++|.|.+.+. +.+.+.|++++..+... +......+. .+.|+|.++...|.|.|.|.+.+..+.
T Consensus 8 ~~~~v~~G~~v~l~C~~~~~~~~~~~~~~i~W~~~g~~l~~~-~~~~~~~~~~~~~L~i~~~~~~d~g~y~c~~~~~~~~ 86 (313)
T 2d9q_B 8 SAPIVHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQPGG-RQQRLSDGTQESIITLPHLNHTQAFLSCSLNWGNSLQ 86 (313)
T ss_dssp SCSEECTTCCEEEEECCCTTSCSSCSCSCCEEESSSCBCTTC-EECCCSSSCCCEEEEESCCCSSEEEEEEEEESSSSEE
T ss_pred CCcEEcCCCCEEEEEEECCCCCCCCcccceEEEeCCEECCcc-ceEEEecCeEEEEEEEeccCCCccceEEeeecCCCce
Confidence 34567899999999999986 56899999999877532 222222222 268999999999999999999776555
Q ss_pred eEEEEEEE--ecCCCCccccCccccCCCeeEEEEEeCCC-CCceEEEEEEEeecC-----CCCeEEEeeCCCCCCCccee
Q psy12131 131 SQQFIQLS--GIPNIPVFQKSSRRLGPDGYRLVWQVDTY-SGIIQYLLKFREREE-----LTPWRNIVIPSDGSLAGPIY 202 (245)
Q Consensus 131 ~~~~~~~~--~~~~~p~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 202 (245)
....+.|. ..|.+|.............+.|.|.+..+ .....|.++|+.... ...|..+...... .
T Consensus 87 ~~~~~~l~v~~~P~~P~~l~c~~~~~~~~~~~~W~~~~~~~~~~~Y~l~~~~~~~~~~~~~~~~~~~~~~~~~------~ 160 (313)
T 2d9q_B 87 ILDQVELRAGYPPAIPHNLSCLMNLTTSSLICQWEPGPETHLPTSFTLKSFKSRGNCQTQGDSILDCVPKDGQ------S 160 (313)
T ss_dssp EEEEEEEEECCCCCCCEEEEEEEETTTTEEEEEEECCSCCSSCCEEEEEEEECCTTSCSCCCCEEEECCCTTC------S
T ss_pred eEEEEEEccCCCCCCCccceeeECCCCccEEEEecCCCCCCCceeEEEEEEecCCCcccCCcccccCCCCCCC------c
Confidence 44444444 34556665544332245789999998433 234579999987531 2235444321111 1
Q ss_pred eeEEEecCCCCCceEEEEEEEEecCCCCCCCcceEEe
Q psy12131 203 TQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYVFA 239 (245)
Q Consensus 203 ~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~~ 239 (245)
...+...+|.+...|.|+|.|.|..|.+.. ..+.+.
T Consensus 161 ~~~~~~~~L~~~~~Y~f~V~A~N~~G~~~s-~~~~~~ 196 (313)
T 2d9q_B 161 HCSIPRKHLLLYQNMGIWVQAENALGTSMS-PQLCLD 196 (313)
T ss_dssp EEEEEGGGCCSSSCEEEEEEEEETTEEEEC-CCEEEC
T ss_pred EEEECccccccceeEEEEEEEECCCCCccC-ccEEEe
Confidence 133344569999999999999999998643 334443
No 198
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.73 E-value=2.8e-16 Score=111.85 Aligned_cols=157 Identities=15% Similarity=0.167 Sum_probs=110.9
Q ss_pred cCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeC
Q psy12131 48 YPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNN 127 (245)
Q Consensus 48 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 127 (245)
..+.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ...|.|.++...|.|.|+|.+.|.
T Consensus 17 ~~~~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~---------~~~L~i~~v~~~d~G~Y~C~~~n~ 87 (218)
T 3k0w_A 17 RGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGN---------TSELIFNAVHVKDAGFYVCRVNNN 87 (218)
T ss_dssp --CCEEECCCCEEEETTSBEEEECEETTTTSSEEEEEETTEECTTCC---------SSEEEETTCCGGGCEEEEEEEECT
T ss_pred CCCEEEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCCC---------CCEEEEccCChhhCeEeEEEEEcC
Confidence 35667777778889999999999999999999999999998876542 347999999999999999999998
Q ss_pred Ccee-EEEEEEEecCCC--------------CccccC---ccccCCCeeEEEEEeCCCCCceEEEEEEEeecCCCCeEEE
Q psy12131 128 LGSS-QQFIQLSGIPNI--------------PVFQKS---SRRLGPDGYRLVWQVDTYSGIIQYLLKFREREELTPWRNI 189 (245)
Q Consensus 128 ~g~~-~~~~~~~~~~~~--------------p~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (245)
.|.. ...+.+.+...+ |.+... .....+..+.|.|.+.+.++. .+ .|+++..
T Consensus 88 ~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~-~v-~W~~~~~-------- 157 (218)
T 3k0w_A 88 FTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIP-HY-QWFKNEL-------- 157 (218)
T ss_dssp TCCEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCC-EE-EEEETTE--------
T ss_pred CCCceeeEEEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEecccCCC-eE-EEEECCE--------
Confidence 7743 223333332221 222211 234678899999999666443 22 3444422
Q ss_pred eeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCC
Q psy12131 190 VIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWS 230 (245)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~ 230 (245)
.+.... ...+.|.++...+.+.|+|.|.|..|..
T Consensus 158 ~~~~~~-------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~ 191 (218)
T 3k0w_A 158 PLTHET-------KKLYMVPYVDLEHQGTYWCHVYNDRDSQ 191 (218)
T ss_dssp ECTTCC-------SSEEEESSCCGGGCEEEEEEEECSSCEE
T ss_pred ECCCCC-------CCEEEEeecChhcCEEEEEEEEcCCCCc
Confidence 011111 1468899999999999999999998863
No 199
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.73 E-value=4.7e-17 Score=115.66 Aligned_cols=129 Identities=14% Similarity=0.116 Sum_probs=89.0
Q ss_pred ceEEEee--cceEEEeccCCCCCEEEEEEEEcCCC-CceeeEEEEEEe---cCCeEEeecceEEecCCCeEEEEEEEee-
Q psy12131 3 EIELLYN--RESLDLDRVTLKLAGLYQCIASNNIG-ESTSKNFIVNVI---YPPEVSVEKQWIHTAPDMRAEIICNVYA- 75 (245)
Q Consensus 3 ~~~~~~~--~~~L~i~~~~~~d~G~Y~C~~~~~~~-~~~~~~~~l~v~---~~p~~~~~~~~~~~~~g~~~~l~C~~~~- 75 (245)
|+.+... ..+|.|.+++.+|+|.|+|.+.+..+ ........|.|. .+|.+...+.......|+.+.|.|.+.|
T Consensus 62 r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~ 141 (216)
T 2xzc_L 62 RFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNF 141 (216)
T ss_dssp TEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEE
T ss_pred ceEEeccCCEEEEEECCCCcccCEEEEEEEEeCCCcceECCCEEEEEcCCCCCCceEEeCCChhhccCCcEEEEEEEEeE
Confidence 5555532 34699999999999999999999876 112334566776 4566655433222335889999999998
Q ss_pred cCCC-eEEEEECCEEeccCCcEE--EEecC-----ceeEEEEccCCCCCCeEEEEEEEeCCcee
Q psy12131 76 NPPA-KVEWFRDGTAITLGGRID--MHVSS-----EKHSLLVRHIKDTDFGNYMCQASNNLGSS 131 (245)
Q Consensus 76 ~~~~-~~~w~~~~~~~~~~~~~~--~~~~~-----~~~~l~i~~~~~~d~g~y~C~~~n~~g~~ 131 (245)
.|.+ .+.|++++..+....... ..... ..+.|.|.....+|.|.|+|.+.|.....
T Consensus 142 ~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 205 (216)
T 2xzc_L 142 YPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSS 205 (216)
T ss_dssp BSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSS
T ss_pred cCCceEEEEEECCeecCCCeeEecCcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCC
Confidence 4554 899999998876541111 11111 12378899998899999999999986443
No 200
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.73 E-value=3.5e-16 Score=106.88 Aligned_cols=154 Identities=13% Similarity=0.187 Sum_probs=105.8
Q ss_pred CCeEEeecceEEecCCCeEEEEEEEeecC-CCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeC
Q psy12131 49 PPEVSVEKQWIHTAPDMRAEIICNVYANP-PAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNN 127 (245)
Q Consensus 49 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~-~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 127 (245)
+|.+...+....+.+|+.+.|.|.+.+.| .+.+.|++++..+.... ..+.+.++...|.|.|.|.+.|.
T Consensus 4 ~p~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~~----------~~~~~~~~~~~d~G~Y~C~~~~~ 73 (170)
T 3ry4_A 4 KAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHT----------QPSYRFKANNNDSGEYTCQTGQT 73 (170)
T ss_dssp BCEEEEESCCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTCC----------SSEEEEECCGGGCEEEEEEETTS
T ss_pred CCEEEeCCCCeEEECCCcEEEEEEecCCCCcceEEEEECCeEcccCc----------cceEEEecccccCeEEEEEEeCC
Confidence 34555566656678999999999999886 56999999999877542 23667789999999999999986
Q ss_pred CceeEEEEEEEecCCCCcccc-CccccCCCeeEEEEEeCCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEE
Q psy12131 128 LGSSQQFIQLSGIPNIPVFQK-SSRRLGPDGYRLVWQVDTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSY 206 (245)
Q Consensus 128 ~g~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (245)
.......+.+.. .++.... ......++.+.|.|....+.|...+. |+++.. - +...... ..+
T Consensus 74 ~~s~~~~l~v~~--~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~-W~~~g~----~--~~~~~~~--------~~L 136 (170)
T 3ry4_A 74 SLSDPVHLTVLF--EWLVLQTPHLEFQEGETIMLRCHSWKDKPLVKVT-FFQNGK----S--QKFSHLD--------PTF 136 (170)
T ss_dssp BCCCCEEEEEEC--CSEEEECSCSEECTTCCEEEEEEEGGGCCEEEEE-EEETTE----E--EEEESSC--------CEE
T ss_pred CceEeEEEEEEC--CceEecCCCceeecCCeEEEEEECCCCCCCceEE-EEECCe----E--ccccCCC--------CeE
Confidence 655544444433 2222221 12345788999999995554443343 444322 1 1111111 568
Q ss_pred EecCCCCCceEEEEEEEEecCCC
Q psy12131 207 NITGLQLFTQYEASVLAKNRFGW 229 (245)
Q Consensus 207 ~i~~l~~~~~y~~~v~a~N~~G~ 229 (245)
.|.++...+.+.|+|.|.|..|.
T Consensus 137 ~i~~v~~~d~G~Y~C~a~n~~g~ 159 (170)
T 3ry4_A 137 SIPQANHSHSGDYHCTGNIGYTL 159 (170)
T ss_dssp EESSCCGGGCEEEEEEEEETTEE
T ss_pred EEEeccccCCEEEEEEEEeCcCc
Confidence 89999999999999999999985
No 201
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.73 E-value=8.1e-17 Score=112.90 Aligned_cols=181 Identities=13% Similarity=0.109 Sum_probs=114.0
Q ss_pred cCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeC
Q psy12131 48 YPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNN 127 (245)
Q Consensus 48 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 127 (245)
.+|.+...+.. .+.+|+.+.|.|.+.+.+. .+.|++++..+...... .........|.|.++..+|.|.|+|.+.|.
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~-~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 80 (198)
T 1ugn_A 4 PKPTLWAEPGS-VITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRI-PQELVKKGQFPIPSITWEHTGRYRCYYGSD 80 (198)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTS-CHHHHTTTEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCeEeccCCC-cccCCCcEEEEEEecCCCc-EEEEEECCccccccccc-cccCCcccEEEECCCCHHHCeEEEEEEECC
Confidence 46777766653 6789999999999987765 79999998766321100 000113457999999999999999999998
Q ss_pred C-ce--eEEEEEEEec--CCCCccccC--ccccCCCeeEEEEEeCCCCCceEEEEEEEeecCC-CCeEEEeeCCCCCCCc
Q psy12131 128 L-GS--SQQFIQLSGI--PNIPVFQKS--SRRLGPDGYRLVWQVDTYSGIIQYLLKFREREEL-TPWRNIVIPSDGSLAG 199 (245)
Q Consensus 128 ~-g~--~~~~~~~~~~--~~~p~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 199 (245)
. |. ....+.+.+. +.+|.+... .....++.+.|.|.+.+..+ .+ .|+++.... ..-........
T Consensus 81 ~~g~~~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~~~~--~v-~W~k~g~~~~~~~~~~~~~~~----- 152 (198)
T 1ugn_A 81 TAGRSESSDPLELVVTGAYIKPTLSAQPSPVVNSGGNVTLQCDSQVAFD--GF-ILCKEGEDEHPQCLNSQPHAR----- 152 (198)
T ss_dssp TTEECCCCCCEEEEEECSSCCCEEEEESCSEEETTCCEEEEEECSSCCS--EE-EEEEC------CEEEC----------
T ss_pred CCCcccCCccEEEEEcccccCCccccCCccccCCCCcEEEEEecCCCCc--EE-EEEECCCccCCccccccccCC-----
Confidence 7 52 2333444443 333433222 34567899999999977643 23 355554310 00001000000
Q ss_pred ceeeeEEEecCCCCCceEEEEEEEEecCC---CCCCCcceEEe
Q psy12131 200 PIYTQSYNITGLQLFTQYEASVLAKNRFG---WSRPSKAYVFA 239 (245)
Q Consensus 200 ~~~~~~~~i~~l~~~~~y~~~v~a~N~~G---~~~~s~~~~~~ 239 (245)
......|.|.++...+.+.|+|.|.|..+ .+..|+.+.+.
T Consensus 153 ~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~ 195 (198)
T 1ugn_A 153 GSSRAIFSVGPVSPSRRWWYRCYAYDSNSPYEWSLPSDLLELL 195 (198)
T ss_dssp -CCEEEEEECCCCTTSCEEEEEEEECTTSTTEECCCCCCEEEE
T ss_pred CcceeEEEecccCcccCeEEEEEEEeCCCCccccCcCceEEEE
Confidence 01126789999999999999999999977 35566666654
No 202
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.73 E-value=5.9e-17 Score=115.42 Aligned_cols=134 Identities=13% Similarity=0.107 Sum_probs=89.9
Q ss_pred cceEEEee----cceEEEeccCCCCCEEEEEEEEcCCCC---ceeeEEEEEEecC----CeEEeecceEEecCCCeEEEE
Q psy12131 2 KEIELLYN----RESLDLDRVTLKLAGLYQCIASNNIGE---STSKNFIVNVIYP----PEVSVEKQWIHTAPDMRAEII 70 (245)
Q Consensus 2 ~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~~~~~~---~~~~~~~l~v~~~----p~~~~~~~~~~~~~g~~~~l~ 70 (245)
+|+.+..+ ..+|.|.+++.+|+|.|+|.+.+..+. .....+.|.|... |.+...+....+..|+.+.|.
T Consensus 66 ~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~ 145 (219)
T 1c1e_H 66 GRFAFFLETSATTAYLQINNLKNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLG 145 (219)
T ss_dssp SSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECCCSSSCCSSEEEEE
T ss_pred CcEEEEEecCCCEEEEEECCCCcccCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecCccccccCCeEEEE
Confidence 46666643 357999999999999999999987632 1223566777653 555544433345689999999
Q ss_pred EEEee-cCCC-eEEEEECCEEeccCCcEEEEecC---ceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEE
Q psy12131 71 CNVYA-NPPA-KVEWFRDGTAITLGGRIDMHVSS---EKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQ 136 (245)
Q Consensus 71 C~~~~-~~~~-~~~w~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 136 (245)
|.+.+ .|.| .+.|++++..+...........+ ..+.|.|..... |.|.|+|.|.|..+.......
T Consensus 146 C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-d~g~Y~C~a~n~~~~~~~~~~ 215 (219)
T 1c1e_H 146 CLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPR-PSETVTCNVAHPASSTKVDKK 215 (219)
T ss_dssp EEEEEEBSSCCEEEEGGGTBCTTEEECCCEESSSCEEEEEEEEEESSST-TTSCCEEEEEEGGGTEEEEEE
T ss_pred EEcccccCCCeEEEEEeCCcccceEecCCcccCCeEEEEEEEEEecccC-CCCEEEEEEEeCCCCccEEEe
Confidence 99998 8888 99999988653211000011111 124678854444 569999999998876554443
No 203
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.73 E-value=5e-17 Score=111.13 Aligned_cols=117 Identities=14% Similarity=0.257 Sum_probs=90.4
Q ss_pred cceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEe-ecCCCeEEEEECCE
Q psy12131 10 RESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVY-ANPPAKVEWFRDGT 88 (245)
Q Consensus 10 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~-~~~~~~~~w~~~~~ 88 (245)
...+.|.+++.+|+|.|+|.+.+.. .+..+.|.|..+|.+...+ ...+.+|+.+.|.|.+. +.|.+.+.|++++.
T Consensus 50 ~~~~~~~~~~~~d~G~Y~C~~~~~~---~s~~~~l~v~~~~~~~~~~-~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~ 125 (170)
T 3ry4_A 50 TQPSYRFKANNNDSGEYTCQTGQTS---LSDPVHLTVLFEWLVLQTP-HLEFQEGETIMLRCHSWKDKPLVKVTFFQNGK 125 (170)
T ss_dssp CSSEEEEECCGGGCEEEEEEETTSB---CCCCEEEEEECCSEEEECS-CSEECTTCCEEEEEEEGGGCCEEEEEEEETTE
T ss_pred ccceEEEecccccCeEEEEEEeCCC---ceEeEEEEEECCceEecCC-CceeecCCeEEEEEECCCCCCCceEEEEECCe
Confidence 3458899999999999999999743 4556888888877655544 34577899999999994 45668999999998
Q ss_pred EeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCce-eEEEEEEE
Q psy12131 89 AITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGS-SQQFIQLS 138 (245)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~-~~~~~~~~ 138 (245)
.+... .....|.|.++..+|.|.|+|.+.|..|. ....+.+.
T Consensus 126 ~~~~~--------~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~ 168 (170)
T 3ry4_A 126 SQKFS--------HLDPTFSIPQANHSHSGDYHCTGNIGYTLFSSKPVTIT 168 (170)
T ss_dssp EEEEE--------SSCCEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEE
T ss_pred Ecccc--------CCCCeEEEEeccccCCEEEEEEEEeCcCccccccEEEE
Confidence 75422 13457999999999999999999999886 33344444
No 204
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.73 E-value=1.2e-16 Score=118.14 Aligned_cols=126 Identities=18% Similarity=0.319 Sum_probs=93.4
Q ss_pred cceEEEee----cceEEEeccCCCCCEEEEEEEEcCCCC---c-eeeEEEEEEecCC---------------eEEeecce
Q psy12131 2 KEIELLYN----RESLDLDRVTLKLAGLYQCIASNNIGE---S-TSKNFIVNVIYPP---------------EVSVEKQW 58 (245)
Q Consensus 2 ~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~~~~~~---~-~~~~~~l~v~~~p---------------~~~~~~~~ 58 (245)
+|+.+..+ ..+|.|.+++.+|+|.|+|.+.+..|. . ....+.|.|..+| .+...+..
T Consensus 92 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~ 171 (282)
T 1qok_A 92 GKATFTTDTSSNTAYLQLSSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAI 171 (282)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSE
T ss_pred CcEEEEEecCCCeEEEEECcCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCE
Confidence 46666642 356999999999999999999998651 1 1234567777543 34455666
Q ss_pred EEecCCCeEEEEEEEeecCCCeEEEEE--CCEEec------------cCCcEEEEecCceeEEEEccCCCCCCeEEEEEE
Q psy12131 59 IHTAPDMRAEIICNVYANPPAKVEWFR--DGTAIT------------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQA 124 (245)
Q Consensus 59 ~~~~~g~~~~l~C~~~~~~~~~~~w~~--~~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 124 (245)
..+.+|+.+.|.|.+.+.+ +.+.|++ ++..+. ...++..........|.|.++..+|.|.|.|.+
T Consensus 172 ~~v~~G~~v~L~C~~~~~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a 250 (282)
T 1qok_A 172 MSASPGEKVTITCSASSSV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQ 250 (282)
T ss_dssp EEECTTCCEEEEEEESSCC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred EEEcCCCcEEEEEEecCCC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEE
Confidence 7789999999999999888 8999999 554321 124555544455678999999999999999999
Q ss_pred EeCC
Q psy12131 125 SNNL 128 (245)
Q Consensus 125 ~n~~ 128 (245)
.+..
T Consensus 251 ~~~~ 254 (282)
T 1qok_A 251 RSSY 254 (282)
T ss_dssp CSSS
T ss_pred eeCC
Confidence 9853
No 205
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.73 E-value=4.3e-16 Score=107.93 Aligned_cols=167 Identities=13% Similarity=0.121 Sum_probs=109.7
Q ss_pred cCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeC
Q psy12131 48 YPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNN 127 (245)
Q Consensus 48 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 127 (245)
.+|.+...+.. .+.+|+.+.|.|.+.+ +.+.+.|++++.... .....|.|.++..+|.|.|+|.+.|.
T Consensus 7 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~~~----------~~~~~L~i~~v~~~D~G~Y~C~a~n~ 74 (184)
T 2gi7_A 7 PKPSLQALPSS-LVPLEKPVTLRCQGPP-GVDLYRLEKLSSSRY----------QDQAVLFIPAMKRSLAGRYRCSYQNG 74 (184)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECST-TCSEEEEEETTTCCE----------ESSSEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCeEEeCCCc-cccCCCcEEEEEeCCC-CCCEEEEEECCcccc----------CcccEEEECcCChhhCceEEEEEEcC
Confidence 46777766654 6889999999999987 778999999886511 13457999999999999999999998
Q ss_pred Ccee--EEEEEEEe--cCCCCcccc--CccccCCCeeEEEEEeCCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcce
Q psy12131 128 LGSS--QQFIQLSG--IPNIPVFQK--SSRRLGPDGYRLVWQVDTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPI 201 (245)
Q Consensus 128 ~g~~--~~~~~~~~--~~~~p~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (245)
.|.. ...+.+.+ ...+|.+.. ......++.+.|.|...+.++ .| .|+++.. ..... . ....
T Consensus 75 ~g~~~~s~~~~l~V~~~~~~p~i~~~p~~~v~~G~~v~l~C~~~~~~~--~~-~w~k~g~-~~~~~------~---~~~~ 141 (184)
T 2gi7_A 75 SLWSLPSDQLELVATGVFAKPSLSAQPGPAVSSGGDVTLQCQTRYGFD--QF-ALYKEGD-PAPYK------N---PERW 141 (184)
T ss_dssp TEEBCCCCCEEEEEESSSCCCEEEEECCCSSCCTTCEEEEEECSSCCC--EE-EEEECCC-CTTSC------C---CCEE
T ss_pred CCccCCCCCEEEEecCcCCCCEEEeCCCceecCCCcEEEEEEcCCCCc--EE-EEEECCC-cCcce------e---cCCC
Confidence 7632 22334443 333443322 123467899999999865543 33 4566543 11100 0 0011
Q ss_pred eeeEEEecCCCCCceEEEEEEEEecCCC---CCCCcceEEe
Q psy12131 202 YTQSYNITGLQLFTQYEASVLAKNRFGW---SRPSKAYVFA 239 (245)
Q Consensus 202 ~~~~~~i~~l~~~~~y~~~v~a~N~~G~---~~~s~~~~~~ 239 (245)
....|.|.++...+.+.|+|.|.|..+. +..|..+.+.
T Consensus 142 ~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~ 182 (184)
T 2gi7_A 142 YRASFPIITVTAAHSGTYRCYSFSSRDPYLWSAPSDPLELV 182 (184)
T ss_dssp EEESSSEEEETTCCSEEEEEEEECTTSTTBCCCCCCCEEEE
T ss_pred ceEEEEEccCCccCCeEEEEEEEeCCCCcccCCCCCcEEEE
Confidence 1244667777778888888889998753 4566666554
No 206
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.73 E-value=1.6e-16 Score=112.58 Aligned_cols=124 Identities=18% Similarity=0.195 Sum_probs=89.2
Q ss_pred cceEEEee--cceEEEeccCCCCCEEEEEEEEcCCCC--ceeeEEEEEEe---cCCeEEeecceEEecCCCeEEEEEEEe
Q psy12131 2 KEIELLYN--RESLDLDRVTLKLAGLYQCIASNNIGE--STSKNFIVNVI---YPPEVSVEKQWIHTAPDMRAEIICNVY 74 (245)
Q Consensus 2 ~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~~~l~v~---~~p~~~~~~~~~~~~~g~~~~l~C~~~ 74 (245)
+|+.+... ..+|.|.+++.+|+|.|+|.+.+..+. .......|.|. .+|.+...+....+..|+.+.|.|.+.
T Consensus 60 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~ 139 (213)
T 3nl4_L 60 SRFKGSGSGTDFTLTISDLECADAATYYCQSTYENPTYVSFGGGTEVGVKGDPVAPTVLIFPPSADLVATGTVTIVCVAN 139 (213)
T ss_dssp TTEEEEEETTEEEEEECSCCGGGCEEEEEEECCSSTTTCEECCCEEEEEECCCBCCEEEEECCCHHHHTTSEEEEEEEEE
T ss_pred ccEEEecCCCEEEEEECCCChHHCEEEEEecCCCCceeEEeCCCeEEEEeCCCcCCeEEEeCCchhhccCCcEeEEEEEe
Confidence 45555533 246999999999999999999987663 23445566663 566665554444456799999999999
Q ss_pred e-cCCCeEEEEECCEEeccCCcEEEE---ec-C---ceeEEEEccCCCCCCeEEEEEEE
Q psy12131 75 A-NPPAKVEWFRDGTAITLGGRIDMH---VS-S---EKHSLLVRHIKDTDFGNYMCQAS 125 (245)
Q Consensus 75 ~-~~~~~~~w~~~~~~~~~~~~~~~~---~~-~---~~~~l~i~~~~~~d~g~y~C~~~ 125 (245)
+ .|.+.+.|++++..+......... .. + ..+.|.|..+..+|.|.|+|.|.
T Consensus 140 g~~P~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 140 KYFPDVTVTWEVDGTTQTTGIENSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp EEBSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred cccCCcEEEEEeCCccCCCCeecccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 8 888999999999887542100000 00 0 12568899999999999999999
No 207
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.72 E-value=1.4e-16 Score=112.69 Aligned_cols=181 Identities=14% Similarity=0.120 Sum_probs=116.3
Q ss_pred cCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCc-----EEEEecCce--eEEEEccCCCCCCeEE
Q psy12131 48 YPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGR-----IDMHVSSEK--HSLLVRHIKDTDFGNY 120 (245)
Q Consensus 48 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~-----~~~~~~~~~--~~l~i~~~~~~d~g~y 120 (245)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+..... ......+.. ..+.|.++...|.|.|
T Consensus 8 ~pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 87 (212)
T 2v9r_A 8 FPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVY 87 (212)
T ss_dssp EEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEEE
T ss_pred CCcceecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeEE
Confidence 467777777788899999999999999999999999999987764321 111111111 1234456788999999
Q ss_pred EEEEEeCCcee-EEEEEEEecCCCCccc---cCccccCCCeeEEEEEe-CCCCCceEEEEEEEeec---CCCCeEEEeeC
Q psy12131 121 MCQASNNLGSS-QQFIQLSGIPNIPVFQ---KSSRRLGPDGYRLVWQV-DTYSGIIQYLLKFRERE---ELTPWRNIVIP 192 (245)
Q Consensus 121 ~C~~~n~~g~~-~~~~~~~~~~~~p~~~---~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 192 (245)
+|.+.|..|.. ...+.+.+...++.+. .......++.+.|.|.+ .+.++. .+ .|+++.. ........
T Consensus 88 ~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~v-~W~~~~~~l~~~~~~~~~--- 162 (212)
T 2v9r_A 88 VCVARNYLGEAVSHDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEP-TI-SWKKDGSPLDDKDERITI--- 162 (212)
T ss_dssp EEEEEETTEEEECCCEEEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEESCC-EE-EEEETTEEECTTSTTEEE---
T ss_pred EEEEECCCCceeecceEEEEEeccccceeCCCceEecCCCcEEEEEecCCCCCCC-EE-EEEECCccCCCCcceEEc---
Confidence 99999988765 2344444332222221 12235678899999998 554433 33 3444432 11111111
Q ss_pred CCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCC-cceEEecCC
Q psy12131 193 SDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPS-KAYVFATEG 242 (245)
Q Consensus 193 ~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s-~~~~~~t~~ 242 (245)
....+.|.++...+.+.|+|.|.|..|..... ..+.+...|
T Consensus 163 ---------~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~~P 204 (212)
T 2v9r_A 163 ---------RGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERP 204 (212)
T ss_dssp ---------ETTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred ---------cCCeEEEeeCCHhhCeeEEEEEecccCceecceEEEEEEeCc
Confidence 11468899999999999999999999976443 456665444
No 208
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.72 E-value=5.3e-18 Score=128.72 Aligned_cols=138 Identities=18% Similarity=0.284 Sum_probs=104.2
Q ss_pred ceEEEeecceEEEeccCCCCCEEEEEEEEcCCCC---ceeeEEEEEEec-----CCeEEeecceEEecCCCeEEEEEEE-
Q psy12131 3 EIELLYNRESLDLDRVTLKLAGLYQCIASNNIGE---STSKNFIVNVIY-----PPEVSVEKQWIHTAPDMRAEIICNV- 73 (245)
Q Consensus 3 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~---~~~~~~~l~v~~-----~p~~~~~~~~~~~~~g~~~~l~C~~- 73 (245)
++.+..+...|.|.+++.+|+|.|+|.|.|..|. ..+..+.|.|.. +|.+...+....+..|+.+.|.|.+
T Consensus 172 ~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~~~~~~~v~~G~~v~L~C~~~ 251 (339)
T 3o4o_C 172 KFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPLKTISASLGSRLTIPCKVF 251 (339)
T ss_dssp SEEECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEECCCSCCCCCCCCSCCCCCCCEE
T ss_pred eeEEcCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEecCCceeEeccCCCEEEEEEEE
Confidence 4555555567999999999999999999998764 246678888874 5566666666678899999999999
Q ss_pred --eecC-CCeEEEEECCEEecc---------CCcEEEEecCc---eeEEEEccCCCCCC-eEEEEEEEeCCceeEEEEEE
Q psy12131 74 --YANP-PAKVEWFRDGTAITL---------GGRIDMHVSSE---KHSLLVRHIKDTDF-GNYMCQASNNLGSSQQFIQL 137 (245)
Q Consensus 74 --~~~~-~~~~~w~~~~~~~~~---------~~~~~~~~~~~---~~~l~i~~~~~~d~-g~y~C~~~n~~g~~~~~~~~ 137 (245)
.|.| .+.+.|++++..+.. ..++.+...+. .+.|.|.++..+|. |.|.|.|.|..|.....+.+
T Consensus 252 ~~~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~~ 331 (339)
T 3o4o_C 252 LGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQTLRTTV 331 (339)
T ss_dssp ESSSCCSSCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCCCSCCCCCEEEEEETTEEECCBCCC
T ss_pred CCCCCCCCceEEEEECCeecccccccccceecceEEecccCceEEEEEEEEEEechhhcCccEEEEEEeccCceEEEEEh
Confidence 8888 789999998876532 22222222221 22799999999997 99999999999988877666
Q ss_pred Eec
Q psy12131 138 SGI 140 (245)
Q Consensus 138 ~~~ 140 (245)
.+.
T Consensus 332 ~~~ 334 (339)
T 3o4o_C 332 KEH 334 (339)
T ss_dssp CC-
T ss_pred hHh
Confidence 543
No 209
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.72 E-value=3.4e-17 Score=111.98 Aligned_cols=114 Identities=13% Similarity=0.153 Sum_probs=84.0
Q ss_pred cceEEEeecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCC---eEEeecceEEecCCCeEEEEEEEeecCC
Q psy12131 2 KEIELLYNRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPP---EVSVEKQWIHTAPDMRAEIICNVYANPP 78 (245)
Q Consensus 2 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p---~~~~~~~~~~~~~g~~~~l~C~~~~~~~ 78 (245)
+|+.+...+.+|.|.+++.+|+|.|+|.+.+..| .+.+.|.|..++ .+.... .. ..|.|.+.+.|.
T Consensus 51 ~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~~~---~~~~~L~V~~~~~~p~i~~~~-------~~-~~L~C~~~~~p~ 119 (171)
T 1ccz_A 51 NRVYLDTVSGSLTIYNLTSSDEDEYEMESPNITD---TMKFFLYVLEMVSKPMIYWEC-------SN-ATLTCEVLEGTD 119 (171)
T ss_dssp TSEEECTTTCCEEECSCCGGGCEEEEEECTTCCS---CEEEEEEEECCCCCCEEEEET-------TT-TEEEEECSSCSS
T ss_pred CcEEEeCCCCeEEECCCChhhCceEEEEEeCCCC---cEEEEEEEECcCCCCEEEEec-------CC-cEEEEEeCCCCC
Confidence 4666655566799999999999999999998766 677888887653 222211 11 379999998899
Q ss_pred CeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEE
Q psy12131 79 AKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 137 (245)
Q Consensus 79 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~ 137 (245)
|.+.|++++..+...... .+.+. ...|.|.|+|.|.|..|.....+.+
T Consensus 120 p~i~W~~~~~~l~~~~~~---------~l~~~--~~~~~g~Y~C~a~N~~~~~~~~~~l 167 (171)
T 1ccz_A 120 VELKLYQGKEHLRSLRQK---------TMSYQ--WTNLRAPFKCKAVNRVSQESEMEVV 167 (171)
T ss_dssp CEEEEEETTEEEEEESSS---------EEEEE--CSCCSSCEEEEEEETTEEEEEEECC
T ss_pred cEEEEEECCEECcCCcce---------EEEEe--ccCCCceEEEEEEcccCcccceeEE
Confidence 999999999877643221 23332 3668899999999999887665544
No 210
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.72 E-value=2.6e-16 Score=116.06 Aligned_cols=126 Identities=14% Similarity=0.162 Sum_probs=88.1
Q ss_pred cceEEEeec--ceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCC-------------eE-EeecceEEecCCC
Q psy12131 2 KEIELLYNR--ESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPP-------------EV-SVEKQWIHTAPDM 65 (245)
Q Consensus 2 ~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p-------------~~-~~~~~~~~~~~g~ 65 (245)
+|+.+..++ .+|.|.+++.+|+|.|+|.+.+..+........|.|..+| .+ ...+....+.+|+
T Consensus 71 ~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~ 150 (276)
T 3auv_A 71 SRFSGSGSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGG 150 (276)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTC
T ss_pred CCEEEeccCCeEEEEEccCChhhCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCC
Confidence 356655433 3699999999999999999998755423334566766543 22 2334566788999
Q ss_pred eEEEEEEEeecC--CCeEEEEECC--EEe-----------------ccCCcEEEEec--CceeEEEEccCCCCCCeEEEE
Q psy12131 66 RAEIICNVYANP--PAKVEWFRDG--TAI-----------------TLGGRIDMHVS--SEKHSLLVRHIKDTDFGNYMC 122 (245)
Q Consensus 66 ~~~l~C~~~~~~--~~~~~w~~~~--~~~-----------------~~~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~C 122 (245)
.+.|.|.+.+.+ .+.+.|+++. ... ....++.+... .....|.|.++..+|.|.|.|
T Consensus 151 ~v~L~C~~~g~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C 230 (276)
T 3auv_A 151 SLRLSCAASGFTISDYWIHWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYC 230 (276)
T ss_dssp CEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEE
T ss_pred eEEEEEEecCccCCCCEEEEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEE
Confidence 999999999876 4899999852 111 01235554432 345689999999999999999
Q ss_pred EEEeC
Q psy12131 123 QASNN 127 (245)
Q Consensus 123 ~~~n~ 127 (245)
.+.|.
T Consensus 231 ~a~n~ 235 (276)
T 3auv_A 231 ARFVF 235 (276)
T ss_dssp EEECS
T ss_pred EEEcC
Confidence 99997
No 211
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.72 E-value=5.4e-17 Score=115.11 Aligned_cols=127 Identities=14% Similarity=0.226 Sum_probs=88.4
Q ss_pred cceEEEee----cceEEEeccCCCCCEEEEEEEEcCCCCc---eeeEEEEEEecC---CeEEeecceEEecCCCeEEEEE
Q psy12131 2 KEIELLYN----RESLDLDRVTLKLAGLYQCIASNNIGES---TSKNFIVNVIYP---PEVSVEKQWIHTAPDMRAEIIC 71 (245)
Q Consensus 2 ~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~~~~~~~---~~~~~~l~v~~~---p~~~~~~~~~~~~~g~~~~l~C 71 (245)
+|+.+..+ ..+|.|.+++.+|+|.|+|.+.+..+.. ....+.|.|..+ |.+..+. .+.+|+.+.|.|
T Consensus 69 ~r~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~---~~~~G~~v~L~C 145 (214)
T 2zg1_A 69 GRFRLLGDVQKKNCSLSIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHFLE---PLESGRPTRLSC 145 (214)
T ss_dssp TTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC--C---CCCTTCCEEEEE
T ss_pred CceEEeccCCCCeEEEEEccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceecCc---cccCCCeEEEEE
Confidence 45665532 3469999999999999999999875321 125778888763 4443322 256899999999
Q ss_pred EEeec----CCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCce--eEEEEEE
Q psy12131 72 NVYAN----PPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGS--SQQFIQL 137 (245)
Q Consensus 72 ~~~~~----~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~--~~~~~~~ 137 (245)
.+.+. |.|.+.|++++....... ....+.|.|..+..+|.|.|+|.|.|..+. ....+.|
T Consensus 146 ~~~~~~~~~p~p~v~W~~~~~~~~~~~------~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v~l 211 (214)
T 2zg1_A 146 SLPGSCEAGPPLTFSWTGNALSPLDPE------TTRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTVQL 211 (214)
T ss_dssp ECTTCCSCSSCCEEEEESSTTSSSCSS------CCCSSEEEECCCTTCCSCEEEEEEECC----CCEEEEEC
T ss_pred EeccCCCCCCCceEEEeCCCCccCCCC------ceeEEEEEEecccHHcCcEEEEEEEeCCCCcceEEEEEE
Confidence 99764 788999999875432211 123467999999989999999999997644 3344443
No 212
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.72 E-value=3.4e-17 Score=119.32 Aligned_cols=129 Identities=17% Similarity=0.244 Sum_probs=89.7
Q ss_pred cceEEEeec--ceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEec---CCeEEeecceEEecCCCeEEEEEEEeec
Q psy12131 2 KEIELLYNR--ESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIY---PPEVSVEKQWIHTAPDMRAEIICNVYAN 76 (245)
Q Consensus 2 ~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~ 76 (245)
+|+.+...+ .+|.|.+++.+|+|.|+|.|.+..+........|.|.. +|.+...+.......|+.+.|.|.+.+.
T Consensus 102 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~ 181 (254)
T 2c1o_A 102 DRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNF 181 (254)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEE
T ss_pred ceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECCCCCCCeeEeecCChhhccCCcEEEEEEEecc
Confidence 455555433 36999999999999999999987654223344566663 5766654433333457899999999884
Q ss_pred -CC-CeEEEEECCEEeccCCc--EEEEecC-----ceeEEEEccCCCCCCeEEEEEEEeCCce
Q psy12131 77 -PP-AKVEWFRDGTAITLGGR--IDMHVSS-----EKHSLLVRHIKDTDFGNYMCQASNNLGS 130 (245)
Q Consensus 77 -~~-~~~~w~~~~~~~~~~~~--~~~~~~~-----~~~~l~i~~~~~~d~g~y~C~~~n~~g~ 130 (245)
|. +.+.|++++..+..... ....... ..+.|.|..+..+|.|.|+|.|.|....
T Consensus 182 ~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~ 244 (254)
T 2c1o_A 182 YPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 244 (254)
T ss_dssp BSSCCEEEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCS
T ss_pred cCCCcEEEEEECCCcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCCC
Confidence 44 46999999987765411 1111111 1357999999999999999999998654
No 213
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.72 E-value=8.5e-17 Score=119.36 Aligned_cols=122 Identities=16% Similarity=0.143 Sum_probs=92.6
Q ss_pred CCCCCEEEEEEEEcCCCCceeeEEEEEEec--CCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcE
Q psy12131 19 TLKLAGLYQCIASNNIGESTSKNFIVNVIY--PPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRI 96 (245)
Q Consensus 19 ~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~--~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~ 96 (245)
...|+|.|+|.|.+..+...+..+.|.|.. +|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++++.........
T Consensus 149 ~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~~~ 228 (289)
T 3mjg_X 149 GIFEDRSYICKTTIGDREVDSDAYYVYRLQVSSINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEP 228 (289)
T ss_dssp ECCCSSEEEEEEEETTEEEECCCEEEEECCCCCCCCEEEESCSEEETTSCEEEEEEEESCSSBEEEEECTTSSSSCCCCC
T ss_pred eeccCcEEEEEEEeCCceeeeeeEEEEecCCCCCCcEEeCCcceeEcCCCEEEEEEECCCCCcceEEEcCCccCCCcccc
Confidence 367999999999987665455566777775 677776665667889999999999999999999999866543322111
Q ss_pred EEEe-----cCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEec
Q psy12131 97 DMHV-----SSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGI 140 (245)
Q Consensus 97 ~~~~-----~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~ 140 (245)
.... ....+.|.|.++..+|.|.|.|.|.|..|.......|.+.
T Consensus 229 ~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~ 277 (289)
T 3mjg_X 229 VTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAINIT 277 (289)
T ss_dssp EEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTEEEEEEEEEE
T ss_pred cccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCceeEEEEEEE
Confidence 1111 1234689999999999999999999999988877666654
No 214
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.72 E-value=3.5e-16 Score=112.94 Aligned_cols=126 Identities=13% Similarity=0.157 Sum_probs=90.4
Q ss_pred cceEEEeec--ceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCC------eEEeecceEEecCCCeEEEEEEE
Q psy12131 2 KEIELLYNR--ESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPP------EVSVEKQWIHTAPDMRAEIICNV 73 (245)
Q Consensus 2 ~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p------~~~~~~~~~~~~~g~~~~l~C~~ 73 (245)
+|+.+...+ .+|.|.+++.+|+|.|+|.+.+..+......+.|.|..++ .+...+....+.+|+.+.|.|.+
T Consensus 64 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~ 143 (240)
T 1moe_A 64 VRFSGTGSRTDFTLIIDPVEADDVATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTA 143 (240)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEE
T ss_pred ccEEEEecCCeEEEEEcCCChhhCEEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEE
Confidence 355555432 3699999999999999999998765433455677887643 23344556678899999999999
Q ss_pred eecCC--CeEEEEEC--CEEe------c-----------cCCcEEEEec--CceeEEEEccCCCCCCeEEEEEEEeC
Q psy12131 74 YANPP--AKVEWFRD--GTAI------T-----------LGGRIDMHVS--SEKHSLLVRHIKDTDFGNYMCQASNN 127 (245)
Q Consensus 74 ~~~~~--~~~~w~~~--~~~~------~-----------~~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~~~n~ 127 (245)
.+.|. +.+.|+++ +... . ...++.+... .....|.|.++..+|.|.|.|.+.+.
T Consensus 144 ~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 220 (240)
T 1moe_A 144 SGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFGY 220 (240)
T ss_dssp ESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECST
T ss_pred cCccCCCCEEEEEEECCCCCcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEec
Confidence 98874 58999984 2211 0 1234444322 34568999999999999999999853
No 215
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.72 E-value=2.7e-16 Score=113.76 Aligned_cols=126 Identities=17% Similarity=0.218 Sum_probs=87.0
Q ss_pred cceEEEee--cceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCe-------------EEeecceEEecCCCe
Q psy12131 2 KEIELLYN--RESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPE-------------VSVEKQWIHTAPDMR 66 (245)
Q Consensus 2 ~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~-------------~~~~~~~~~~~~g~~ 66 (245)
+|+.+... ..+|.|.+++.+|+|.|+|.+.+..+......+.|.|..+|. ....+....+.+|+.
T Consensus 60 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~ 139 (242)
T 2znx_A 60 SRFSGSGSGTDFTLSINSVETEDFGMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQT 139 (242)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSC
T ss_pred CCEEEecCCCEEEEEECCCChHHCEEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCe
Confidence 35665543 346999999999999999999987543223456778876553 222223345889999
Q ss_pred EEEEEEEeecC--CCeEEEEEC--CEEec----------------cCCcEEEEe--cCceeEEEEccCCCCCCeEEEEEE
Q psy12131 67 AEIICNVYANP--PAKVEWFRD--GTAIT----------------LGGRIDMHV--SSEKHSLLVRHIKDTDFGNYMCQA 124 (245)
Q Consensus 67 ~~l~C~~~~~~--~~~~~w~~~--~~~~~----------------~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C~~ 124 (245)
+.|.|.+.+.+ .+.+.|++. +..+. ...++.+.. ......|.|.+++.+|.|.|.|.+
T Consensus 140 v~L~C~~~g~~~~~~~v~W~k~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 219 (242)
T 2znx_A 140 LSLTCSVTGDSITSDYXSXIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCAN 219 (242)
T ss_dssp EEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEE
T ss_pred EEEEEEEEccccCCcceeeEeeCCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEec
Confidence 99999999876 478999984 22210 133455433 234568999999999999999999
Q ss_pred EeC
Q psy12131 125 SNN 127 (245)
Q Consensus 125 ~n~ 127 (245)
.|.
T Consensus 220 ~~~ 222 (242)
T 2znx_A 220 XDG 222 (242)
T ss_dssp TTS
T ss_pred cCC
Confidence 984
No 216
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.72 E-value=1.5e-15 Score=105.55 Aligned_cols=176 Identities=11% Similarity=0.147 Sum_probs=114.0
Q ss_pred CCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCC
Q psy12131 49 PPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNL 128 (245)
Q Consensus 49 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 128 (245)
+|.+...+.. .+.+|+.++|.|.+.+ +.+.+.|++++..+...... .........|.|.++..+|.|.|.|.+.|..
T Consensus 4 ~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~-~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~ 80 (188)
T 1oll_A 4 KPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPK-PPERINKVKFYIPDMNSRMAGQYSCIYRVGE 80 (188)
T ss_dssp CCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCS-SCTTCCEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCEEEeecCC-cCCCCCCEEEEEecCC-CCCEEEEEECCCcccccccc-cCCCcceeEEEeCcCCcccCeEEEEEecCCC
Confidence 5667666655 6789999999999874 45689999999765421100 0112245689999999999999999999875
Q ss_pred cee--EEEEEEEec--CCCCcccc--CccccCCCeeEEEEEeCCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCccee
Q psy12131 129 GSS--QQFIQLSGI--PNIPVFQK--SSRRLGPDGYRLVWQVDTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIY 202 (245)
Q Consensus 129 g~~--~~~~~~~~~--~~~p~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (245)
+.. ...+.+.+. ..+|.+.. ...+..|+.+.|.|.+.+..+ .| .|+++.. .. -........
T Consensus 81 ~~~~~s~~~~l~V~~~~~~p~i~~~p~~~v~~G~~v~L~C~~~~~~~--~~-~w~k~g~-~~-~~~~~~~~~-------- 147 (188)
T 1oll_A 81 LWSEPSNLLDLVVTEMYDTPTLSVHPGPEVISGEKVTFYCRLDTATS--MF-LLLKEGR-SS-HVQRGYGKV-------- 147 (188)
T ss_dssp EECCCCCCEEEEEESCSCCCEEEEESCSEEETTCEEEEEEECSSSCS--EE-EEEEESS-SC-EEEEEECSS--------
T ss_pred CCCCCCCceEEEecccCCCCeEEECCCCccccCCEEEEEEEcCCCCC--EE-EEEECCc-cc-cccccCCCc--------
Confidence 432 233444433 33444332 123567899999999865543 33 3556543 11 111111111
Q ss_pred eeEEEecCCCCCceEEEEEEEEecC-CCCCCCcceEEec
Q psy12131 203 TQSYNITGLQLFTQYEASVLAKNRF-GWSRPSKAYVFAT 240 (245)
Q Consensus 203 ~~~~~i~~l~~~~~y~~~v~a~N~~-G~~~~s~~~~~~t 240 (245)
...|.|.++...+.+.|+|.|.|.. +.+..|..+.+..
T Consensus 148 ~~~L~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V 186 (188)
T 1oll_A 148 QAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLV 186 (188)
T ss_dssp EEEEEEEECCGGGCEEEEEECEEETTEECCCCCCEEEEE
T ss_pred eeEEEECCCCcCCCcEEEEEEEcCCCcCCCCCCcEEEEe
Confidence 2678888999899999999999985 3466777766543
No 217
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.72 E-value=7.5e-17 Score=115.51 Aligned_cols=138 Identities=13% Similarity=0.107 Sum_probs=87.7
Q ss_pred cceEEEee----cceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEec----CCeEEeecceEEecCCCeEEEEEEE
Q psy12131 2 KEIELLYN----RESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIY----PPEVSVEKQWIHTAPDMRAEIICNV 73 (245)
Q Consensus 2 ~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~ 73 (245)
+|+.+..+ ..+|.|.+++.+|+|.|+|.+.+..+......+.|.|.. +|.+........+..|+.+.|.|.+
T Consensus 66 ~R~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~ 145 (227)
T 1mju_H 66 NKATLTVDTSSSTAYMQLSSLTSDDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTSGSSVTLGCLV 145 (227)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECCCC------CEEEEEEE
T ss_pred CcEEEEEeCCCCeEEEEECCCCcccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecCCccccCCCcEEEEEEe
Confidence 46676642 457999999999999999999986322122345677764 4555443322345679999999999
Q ss_pred eec-CCC-eEEEEECCEEeccCCcEEEEecC---ceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEec
Q psy12131 74 YAN-PPA-KVEWFRDGTAITLGGRIDMHVSS---EKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGI 140 (245)
Q Consensus 74 ~~~-~~~-~~~w~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~ 140 (245)
.|. |.+ .+.|++++..+.......+...+ ..+.|.|.....+| |.|+|.+.|..+.......+.+.
T Consensus 146 ~g~~P~p~~v~W~~~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~~~~~ 216 (227)
T 1mju_H 146 KGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPR 216 (227)
T ss_dssp EEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEEEEEECCCC
T ss_pred ecEeCCCeEEEEecCCCcCCcEECCceecCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcceEEEeCCC
Confidence 985 766 99999987653211000011111 13578898888877 99999999987665555555443
No 218
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.71 E-value=1.7e-16 Score=114.51 Aligned_cols=113 Identities=16% Similarity=0.232 Sum_probs=87.5
Q ss_pred cceEEEeccCCCCCEEEEEEEEcCCCCc-eeeEEEEEEec---CCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEE
Q psy12131 10 RESLDLDRVTLKLAGLYQCIASNNIGES-TSKNFIVNVIY---PPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFR 85 (245)
Q Consensus 10 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~ 85 (245)
...|.|.+++.+|+|.|+|.+.+..+.. .+..+.|.|.. +|.+...+. ..+.+|+.++|.|.+.+. .+.+.|++
T Consensus 59 ~~~L~I~~v~~~DsG~Y~C~~~~~~~~s~~S~~~~L~V~~~~~~P~i~~~p~-~~v~~G~~vtL~C~~~~~-~~~~~w~k 136 (242)
T 1p6f_A 59 KVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVHPG-PEVISGEKVTFYCRLDTA-TSMFLLLK 136 (242)
T ss_dssp EEEEEECSCCGGGCEEEEEEEEETTEECCCCCCEEEEEECCSCCCEEEEESC-SEEETTCEEEEEEECTTS-CSEEEEEE
T ss_pred eeEEEecCCCcccCeEEEEEEecCCccccCCcceEEEeecccCCCceEccCC-CccCCCCcEEEEEecCCC-CCEEEEEE
Confidence 4569999999999999999998764322 46678888874 677665553 357899999999998753 56999999
Q ss_pred CCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCC
Q psy12131 86 DGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNL 128 (245)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 128 (245)
++..+.. ..........|.|.++..+|.|.|+|.+.|..
T Consensus 137 ~g~~~~~----~~~~~~~~~~l~I~~v~~~d~G~Y~C~a~n~~ 175 (242)
T 1p6f_A 137 EGRSSHV----QRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNN 175 (242)
T ss_dssp CSSSCEE----EEEECSSEEEEEEEECCGGGCEEEEEEEEEET
T ss_pred CCCccCc----cccCCCceEEEEeCCCccccCEEEEEEEECCC
Confidence 9875543 12233456789999999999999999999863
No 219
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.71 E-value=4.4e-17 Score=115.01 Aligned_cols=182 Identities=16% Similarity=0.173 Sum_probs=113.0
Q ss_pred CCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEe------------ccCCcEEEEecCceeEEEEccCCCCC
Q psy12131 49 PPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAI------------TLGGRIDMHVSSEKHSLLVRHIKDTD 116 (245)
Q Consensus 49 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d 116 (245)
++.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+ ....++.... ..|.|.++...|
T Consensus 4 ~~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~----~~L~i~~~~~~d 79 (209)
T 1nbq_A 4 SVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLP----TGITFKSVTRED 79 (209)
T ss_dssp CCEEECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEET----TEEECSCCCTTS
T ss_pred eEEEEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeec----cEEEEeeCCHHH
Confidence 344555566677889999999999999889999999866442 1122333321 579999999999
Q ss_pred CeEEEEEEEeCCc--eeEEEEE--EEecCCCCccccCccccCCCeeEEEEEe-CCCCCceEEEEEEEeec--CCCCeEEE
Q psy12131 117 FGNYMCQASNNLG--SSQQFIQ--LSGIPNIPVFQKSSRRLGPDGYRLVWQV-DTYSGIIQYLLKFRERE--ELTPWRNI 189 (245)
Q Consensus 117 ~g~y~C~~~n~~g--~~~~~~~--~~~~~~~p~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~ 189 (245)
.|.|+|.+.|..| .....+. +...|..+..........++.+.|.|.+ .+.++. .+ .|+++.. ........
T Consensus 80 ~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~v-~W~~~~~~~~~~~~~~~ 157 (209)
T 1nbq_A 80 TGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPS-EY-TWFKDGIVMPTNPKSTR 157 (209)
T ss_dssp CSEEEEEEEETTSSCEECCEEECCEEBCCCCCCCCCBSEEETTSCEEECCCCCSCBSCC-EE-EEEETTCCCCSCSSSSS
T ss_pred CcEEEEEEecCCCCccceEEEEEEEecCCcCCCcccccceecCCEEEEEEeCCCCCCCc-ee-EEEECCeeCCCccccce
Confidence 9999999999755 2223333 3344444433333445778899999997 555433 33 3555433 00000000
Q ss_pred eeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceE
Q psy12131 190 VIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYV 237 (245)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~ 237 (245)
...... .........+.|.++...+.+.|+|.|.|..|....+..+.
T Consensus 158 ~~~~~~-~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~v~ 204 (209)
T 1nbq_A 158 AFSNSS-YVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSNAVR 204 (209)
T ss_dssp SCTTCC-CCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCCEECCCBC
T ss_pred eeeccc-eEEcCCcceEEEEeccccCCeEEEEEEeCCcCcccccccEE
Confidence 000000 00000125688889988888888888999999884444443
No 220
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.71 E-value=1.8e-16 Score=113.01 Aligned_cols=127 Identities=15% Similarity=0.172 Sum_probs=91.0
Q ss_pred cceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEE-eecCCCeEEEEECCE
Q psy12131 10 RESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNV-YANPPAKVEWFRDGT 88 (245)
Q Consensus 10 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~~~w~~~~~ 88 (245)
..+|.|.+++.+|+|.|+|.+.+..+........+.+..+|.....+.......+..+.+.|.+ .+.|.+.+.|++++.
T Consensus 82 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~ 161 (225)
T 4fmk_A 82 DATLAFRGLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSLG 161 (225)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSC
T ss_pred cEEEEEccCCHHHCcceEEEEEeCCCcceeeeeeeeeecCCceeecccceeecceeeeeeeeeecCCCCCCEEEEEECCc
Confidence 3569999999999999999999887765556666777777776666555556667777776665 567888999998765
Q ss_pred EeccCCcEEEEecCc---eeEEEEccCCCCCCeEEEEEEEeCCceeEEEEE
Q psy12131 89 AITLGGRIDMHVSSE---KHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQ 136 (245)
Q Consensus 89 ~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 136 (245)
.............+. .+.|.|..+..+|.|.|+|.|.|..+.......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~ 212 (225)
T 4fmk_A 162 GEAKDTQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLP 212 (225)
T ss_dssp CEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEE
T ss_pred cccCCcceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEE
Confidence 443322211111111 347999999999999999999998876544433
No 221
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.71 E-value=4.5e-15 Score=118.65 Aligned_cols=132 Identities=16% Similarity=0.193 Sum_probs=82.6
Q ss_pred cceEEEee----cceEEEeccCCCCCEEEEEEEEcCCC----------C--ceeeEEEEEEec----CCeEEee-cceEE
Q psy12131 2 KEIELLYN----RESLDLDRVTLKLAGLYQCIASNNIG----------E--STSKNFIVNVIY----PPEVSVE-KQWIH 60 (245)
Q Consensus 2 ~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~~~~~----------~--~~~~~~~l~v~~----~p~~~~~-~~~~~ 60 (245)
+|+.+..+ ..+|.|.+++.+|+|.|.|.+.+..+ . .......|.|.. +|.+... +....
T Consensus 67 ~R~~~~~~~~~~~~sL~I~~v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~ 146 (512)
T 1zvo_C 67 GRVTISVDTSRNQFSLNLRSMSAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCRH 146 (512)
T ss_pred CceEEEecCCCCEEEEEECcCCHHHCEEEEEEEECCCCccccccccccccccccCceEEEecccCCcCCeEEeccCCccc
Confidence 56776642 35799999999999999999997642 0 012345677763 4544321 11110
Q ss_pred ecCCCeEEEEEEEeec-CCC-eEEEEECCEEeccC-CcEEEEecC---ceeEEEEccCCCCCCeEEEEEEEeCCceeEEE
Q psy12131 61 TAPDMRAEIICNVYAN-PPA-KVEWFRDGTAITLG-GRIDMHVSS---EKHSLLVRHIKDTDFGNYMCQASNNLGSSQQF 134 (245)
Q Consensus 61 ~~~g~~~~l~C~~~~~-~~~-~~~w~~~~~~~~~~-~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~ 134 (245)
...++.+.|.|.+.+. |.| .+.|++++...... ........+ ..+.|.|...... .|.|+|.+.|..+.....
T Consensus 147 ~~~~~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~ 225 (512)
T 1zvo_C 147 PKDNSPVVLACLITGYHPTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSKKE 225 (512)
T ss_pred ccCCCeEEEEEEEEeeecCceEEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCceEE
Confidence 2246899999999987 655 89999865321100 000011111 1246788877666 899999999988765543
No 222
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.71 E-value=1.1e-16 Score=113.39 Aligned_cols=129 Identities=16% Similarity=0.169 Sum_probs=91.5
Q ss_pred cceEEEe--ecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEE---ecCCeEEeecceEEecCCCeEEEEEEEeec
Q psy12131 2 KEIELLY--NRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNV---IYPPEVSVEKQWIHTAPDMRAEIICNVYAN 76 (245)
Q Consensus 2 ~~~~~~~--~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v---~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~ 76 (245)
+|+.+.. +..+|.|.+++.+|+|.|+|.+.+..+........|.| ..+|.+...+.......|+.+.|.|.+.+.
T Consensus 60 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~ 139 (213)
T 3r06_A 60 SRFSGSGSGRDSSFTISSLESEDIGSYYCQQYYNYPWTFGPGTKLEIKRADAKPTVSIFPPSSEQLGTGSATLVCFVNNF 139 (213)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEE
T ss_pred CcEEEeccCCEEEEEECCCCcccCEEEEEecccCCceEEcCCceEEEeccCCCceeeeeCCCceecCCCCcEEEEEEeee
Confidence 3555443 23469999999999999999999876543445566777 567777766555555678889999999886
Q ss_pred CC--CeEEEEECCEEeccCC-cE-EEEecC-----ceeEEEEccCCCCCCeEEEEEEEeCCce
Q psy12131 77 PP--AKVEWFRDGTAITLGG-RI-DMHVSS-----EKHSLLVRHIKDTDFGNYMCQASNNLGS 130 (245)
Q Consensus 77 ~~--~~~~w~~~~~~~~~~~-~~-~~~~~~-----~~~~l~i~~~~~~d~g~y~C~~~n~~g~ 130 (245)
++ +.+.|++++..+.... .. ...... ..+.|.|......|.|.|+|.+.|....
T Consensus 140 ~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~ 202 (213)
T 3r06_A 140 YPKDINVKWKVDGSEKRDGVLQSVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTST 202 (213)
T ss_dssp BSSCEEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCS
T ss_pred cCCceEEEEEECCcccCCceEeccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccC
Confidence 54 3899999998876531 10 011101 1246778888788899999999997643
No 223
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.71 E-value=1e-16 Score=113.49 Aligned_cols=130 Identities=18% Similarity=0.159 Sum_probs=88.9
Q ss_pred cceEEEeec----ceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEec----CCeEEeecceEEecCCCeEEEEEEE
Q psy12131 2 KEIELLYNR----ESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIY----PPEVSVEKQWIHTAPDMRAEIICNV 73 (245)
Q Consensus 2 ~~~~~~~~~----~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~ 73 (245)
+|+.+..+. .+|.|.+++.+|+|.|+|.+.+.. . ......|.|.. +|.+...+....+..|+.+.|.|.+
T Consensus 65 ~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~-~-~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~ 142 (210)
T 3d9a_H 65 SRISITRDTSKNQYYLDLNSVTTEDTATYYCANWDGD-Y-WGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLV 142 (210)
T ss_dssp TTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEETTSS-C-BCCCEEEEECCCCCBCCEEEEECCTTSCCCSSEEEEEEEE
T ss_pred ceEEEEecCCCCEEEEEECCCCcccCEEEEEEEecCc-c-cccceEEEeccCCCCCCEEEEecCCcccccCCcEEEEEEE
Confidence 466666432 379999999999999999999863 1 22335666663 4565544433345689999999999
Q ss_pred eec-CCC-eEEEEECCEEeccCCcEEEEecC---ceeEEEEccCCCCCCeEEEEEEEeCCceeEEE
Q psy12131 74 YAN-PPA-KVEWFRDGTAITLGGRIDMHVSS---EKHSLLVRHIKDTDFGNYMCQASNNLGSSQQF 134 (245)
Q Consensus 74 ~~~-~~~-~~~w~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~ 134 (245)
.+. |.| .+.|++++..+.......+...+ ..+.|.|.....++ |.|+|.+.|..|.....
T Consensus 143 ~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~ 207 (210)
T 3d9a_H 143 KGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVD 207 (210)
T ss_dssp EEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEEE
T ss_pred eeEecCCcEEEEeeCCcccceEEcCCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCcccc
Confidence 987 878 99999987653211000011111 13468888888766 99999999998765443
No 224
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.71 E-value=2.3e-17 Score=121.55 Aligned_cols=218 Identities=11% Similarity=0.034 Sum_probs=79.8
Q ss_pred eEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEee-cceEEecCCCeEEEEEEEeecCCC---eEEEEECC
Q psy12131 12 SLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVE-KQWIHTAPDMRAEIICNVYANPPA---KVEWFRDG 87 (245)
Q Consensus 12 ~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~-~~~~~~~~g~~~~l~C~~~~~~~~---~~~w~~~~ 87 (245)
.|.|.+++.+ |.|+|++... +....+.+.|.|..+|..... +....+.+|+.++|.|.+.+..+. .+.|++++
T Consensus 51 ~~~l~~v~~~--~~y~C~~~~~-~~~~~~~v~l~V~~~P~~v~I~~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~ 127 (291)
T 1mq8_A 51 VYELSNVQED--SQPMCYSNCP-DGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGE 127 (291)
T ss_dssp EEEEESCCSC--CCCEEEEECS-SCEEEEECEEEECBCCSCCCBCCCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSS
T ss_pred EEEEEecccC--CeEEEEEEcC-CccEEEEEEEEEecCCCCCEEecCCccccCCCCEEEEEEecCccCCCCcEEEEEECC
Confidence 3888998854 4699999744 344677888999887764332 222336789999999999875443 69999999
Q ss_pred EEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCce--------eEEEEEEEecCCC---CccccCccccCCC
Q psy12131 88 TAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGS--------SQQFIQLSGIPNI---PVFQKSSRRLGPD 156 (245)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~--------~~~~~~~~~~~~~---p~~~~~~~~~~~~ 156 (245)
..+..... ........+.+.....++.+.|+|+|.|..+. ......+.+...| +..........|+
T Consensus 128 ~~l~~~~~---~~~~~~~~l~~~~~~~D~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~~~~~~~p~~l~eG~ 204 (291)
T 1mq8_A 128 KELKREPA---VGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDT 204 (291)
T ss_dssp SEEEEEEC---CBTTEEEEEECCCSSSCSSCEEEEEEEEECGGGTSCEEEECCCCEECBC--------------------
T ss_pred EEeecccC---CCCCceEEEEeeeeeccCCceEEEEEEecCCccCCccccccccceEEEEEecCCCCceecCCcCccCCC
Confidence 77653321 01122345666666666667999999997652 1222333333222 2222222356799
Q ss_pred eeEEEEEeCCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecC--CC-CCceEEEEEEEEecCCCCCCC
Q psy12131 157 GYRLVWQVDTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITG--LQ-LFTQYEASVLAKNRFGWSRPS 233 (245)
Q Consensus 157 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--l~-~~~~y~~~v~a~N~~G~~~~s 233 (245)
.++|.|..++..|.....++|...+.... ..... .++. ..++... .. .++.|.|.|.|.|.......+
T Consensus 205 ~v~l~C~~~g~~P~~~~~v~w~~~g~~l~-~~~~~-~g~~-------~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~ 275 (291)
T 1mq8_A 205 QGTVVCSLDGLFPVSEAQVHLALGDQRLN-PTVTY-GNDS-------FSAKASVSVTAEDEGTQRLTCAVILGNQSQETL 275 (291)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eEEEEEEcCCCCCCcccEEEEEECCEecC-ceeee-cCCe-------EEEEEecceeEcCCCCEEEEEEEEeCCcceEEE
Confidence 99999999988776544445444320000 00111 1110 1121111 12 466899999999865556666
Q ss_pred cceEEecCCCC
Q psy12131 234 KAYVFATEGAE 244 (245)
Q Consensus 234 ~~~~~~t~~~~ 244 (245)
..+.+...++|
T Consensus 276 ~~l~v~~~~~~ 286 (291)
T 1mq8_A 276 QTVTIYSFPAP 286 (291)
T ss_dssp -----------
T ss_pred EEEEEEcCCCc
Confidence 67776665544
No 225
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.71 E-value=1.2e-16 Score=110.29 Aligned_cols=116 Identities=11% Similarity=0.126 Sum_probs=84.7
Q ss_pred cceEEEeecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEE-eecCCCe
Q psy12131 2 KEIELLYNRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNV-YANPPAK 80 (245)
Q Consensus 2 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~ 80 (245)
+|+.+..++.+|+|.+++.+|+|.|+|.+.+.. .....+.|.|..++.. | .+. ..+..+.|.|.+ .+ |.|.
T Consensus 60 ~R~~l~~~~~sL~I~~v~~~D~G~Y~C~v~~~~--~~~~~~~L~V~~~~~~---P-~i~-~~~~~v~L~C~~~~g-p~p~ 131 (180)
T 2dru_A 60 DRVDLDKTNGALRIYNVSKEDRGDYYMRMLHET--EDQWKITMEVYEMVSK---P-MIY-WECSNATLTCEVLEG-TDVE 131 (180)
T ss_dssp TTEEECTTTCCEEECSCCGGGCEEEEEEEESSS--EEEEEEEEEEECCCCC---C-EEE-EEGGGTEEEEECSSC-TTCE
T ss_pred CeEEEeCCCccEEEcCCCHHHCeEEEEEEEcCC--eEEEEEEEEEECCCCC---C-EEE-ecCCCEEEEEEeCCC-CCCE
Confidence 577774456679999999999999999998765 3677888998765321 1 111 134569999999 55 8899
Q ss_pred EEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEE
Q psy12131 81 VEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQ 136 (245)
Q Consensus 81 ~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 136 (245)
+.|++++..+... ....+.+.. .+|.|.|+|.|.|..+.......
T Consensus 132 i~W~~~~~~l~~~---------~~~~l~~~~--~~d~g~Y~C~a~N~~~~~~~~~~ 176 (180)
T 2dru_A 132 LKLYQGKEHLRSL---------RQKTMSYQW--TNLRAPFKCKAVNRVSQESEMEV 176 (180)
T ss_dssp EEEEETTEEEEEE---------SSSEEEEEC--SCCSSCEEEEEEETTEEEEEEEC
T ss_pred EEEEECCeECcCC---------CCCEEEEEE--hhcCccEEEEEecCcCcccccee
Confidence 9999999876511 123455532 67999999999999987665543
No 226
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.71 E-value=4e-16 Score=111.18 Aligned_cols=129 Identities=14% Similarity=0.197 Sum_probs=91.4
Q ss_pred cceEEEee----cceEEEeccCCCCCEEEEEEEEcCCCCc--eeeEEEEEEe----cCCeEEeecceEEecCCCeEEEEE
Q psy12131 2 KEIELLYN----RESLDLDRVTLKLAGLYQCIASNNIGES--TSKNFIVNVI----YPPEVSVEKQWIHTAPDMRAEIIC 71 (245)
Q Consensus 2 ~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C 71 (245)
+|+.+..+ ..+|.|.+++.+|+|.|+|.+.+..+.. ....+.|.|. .+|.+...+....+.+|+.+.|.|
T Consensus 68 ~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C 147 (220)
T 1pz5_B 68 GRFTISRDDSKSSVYLQMNNLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPGCSDTSGSSVTLGC 147 (220)
T ss_dssp TTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCSCCSCSSSEEEEE
T ss_pred CcEEEEEeCCCCeEEEEEccCCHHHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcccccccCCCCcEEEEE
Confidence 46776643 2379999999999999999999875431 1234667776 346655444333456899999999
Q ss_pred EEeec-CCC-eEEEEECCEEe---ccC-----CcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEE
Q psy12131 72 NVYAN-PPA-KVEWFRDGTAI---TLG-----GRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQ 136 (245)
Q Consensus 72 ~~~~~-~~~-~~~w~~~~~~~---~~~-----~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 136 (245)
.+.|. |.| .+.|++++... ... ..+. ..+.|.|.....++ |.|+|.+.|..|...+.+.
T Consensus 148 ~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~-----~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~ 216 (220)
T 1pz5_B 148 LVKGYFPEPVTVKWNYGALSSGVRTVSSVLQSGFYS-----LSSLVTVPSSTWPS-QTVICNVAHPASKVDLIKE 216 (220)
T ss_dssp EEEEEBSSCCEEEEGGGTCCTTEEECCCEEETTEEE-----EEEEEEECGGGTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred EEEEEeCCCeEEEEecCCcccceEEcCCcccCCeEE-----EEEEEEEcchhcCC-ceEEEEEEECCccEeeeec
Confidence 99987 888 99999977531 110 1111 13578888888766 9999999999987666554
No 227
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.71 E-value=8.2e-17 Score=115.97 Aligned_cols=131 Identities=15% Similarity=0.150 Sum_probs=90.4
Q ss_pred cceEEEe--ecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEe---cCCeEEeecceEEecCCCeEEEEEEEeec
Q psy12131 2 KEIELLY--NRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVI---YPPEVSVEKQWIHTAPDMRAEIICNVYAN 76 (245)
Q Consensus 2 ~~~~~~~--~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~---~~p~~~~~~~~~~~~~g~~~~l~C~~~~~ 76 (245)
+|+.+.. +..+|.|.+++.+|+|.|+|.+.+..+........|.|. .+|.+...+.......|+.+.|.|.+.+.
T Consensus 83 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~ 162 (237)
T 3sob_L 83 SRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNF 162 (237)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECCCBCCEEEEECCCHHHHHHTEEEEEEEEEEE
T ss_pred CcEEEEcCCCEEEEEECCCChhhCeEEEEeeccCCceEEcCcEEEEEecCCCCCceEEeCCChhhccCCceEEEEEEccc
Confidence 3555443 335699999999999999999998765433444566663 46666554443334468899999999884
Q ss_pred -C-CCeEEEEECCEEeccCC-c-EEEEe-cC----ceeEEEEccCCCCCCeEEEEEEEeCCceeE
Q psy12131 77 -P-PAKVEWFRDGTAITLGG-R-IDMHV-SS----EKHSLLVRHIKDTDFGNYMCQASNNLGSSQ 132 (245)
Q Consensus 77 -~-~~~~~w~~~~~~~~~~~-~-~~~~~-~~----~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~ 132 (245)
| .+.+.|++++..+..+. . ..... .. ..+.|.|.....+|.|.|+|.+.|......
T Consensus 163 ~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~ 227 (237)
T 3sob_L 163 YPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSP 227 (237)
T ss_dssp BSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSC
T ss_pred CCCceEEEEEECCCCCCCceeecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCCc
Confidence 4 47999999998876431 0 00000 00 134688888888899999999999875433
No 228
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.71 E-value=4.1e-16 Score=109.59 Aligned_cols=115 Identities=18% Similarity=0.235 Sum_probs=84.5
Q ss_pred cceEEEeccCCCCCEEEEEEEEcCCC----CceeeEEEEEEec---CCeEEeecceEEecCCCeEEEEEEEeecCCCeEE
Q psy12131 10 RESLDLDRVTLKLAGLYQCIASNNIG----ESTSKNFIVNVIY---PPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVE 82 (245)
Q Consensus 10 ~~~L~i~~~~~~d~G~Y~C~~~~~~~----~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~ 82 (245)
...|.|.+++.+|+|.|+|.+.+... ...+..+.|.|.. +|.+...+. ..+.+|+.+.|.|.+.+ +.+.+.
T Consensus 62 ~~~l~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~ 139 (201)
T 1nkr_A 62 KANFSISRMTQDLAGTYRCYGSVTHSPYQVSAPSDPLDIVIIGLYEKPSLSAQPG-PTVLAGENVTLSCSSRS-SYDMYH 139 (201)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEBTTBTTCCCCCCCCEEEEEECSSCCCEEEEESC-SEECTTCEEEEEEEESS-CCSEEE
T ss_pred eEEEEeccCCcccCeEEEEeEecCCCCccccCCCCCEEEEeeccCCCCceecCCC-CccCCCCeEEEEEeCCC-CCceEE
Confidence 45699999999999999999986531 2245677788874 466666554 35789999999999875 568999
Q ss_pred EEECCEEeccCCcEEEEecC-ceeEEEEccCCCCCCeEEEEEEEeCC
Q psy12131 83 WFRDGTAITLGGRIDMHVSS-EKHSLLVRHIKDTDFGNYMCQASNNL 128 (245)
Q Consensus 83 w~~~~~~~~~~~~~~~~~~~-~~~~l~i~~~~~~d~g~y~C~~~n~~ 128 (245)
|++++..+...........+ ....|.|.++. |.|.|+|.+.+..
T Consensus 140 w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--d~G~Y~C~a~~~~ 184 (201)
T 1nkr_A 140 LSREGEAHERRLPAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFHD 184 (201)
T ss_dssp EEETTCSSCEEEECEEEETTEEEEEEEEEECC--SCEEEEEEEEETT
T ss_pred EEECCcccCcccccccccCCceEEEEEeCCcC--CCeeEEEEEEcCC
Confidence 99998765432211111111 25689999998 9999999999753
No 229
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.70 E-value=5.1e-16 Score=111.08 Aligned_cols=176 Identities=13% Similarity=0.111 Sum_probs=104.5
Q ss_pred ceEEecCCCeEEEEEEEeecCCC---eEEEEECCEE-----------ecc------CCcEEEEe---cCceeEEEEccCC
Q psy12131 57 QWIHTAPDMRAEIICNVYANPPA---KVEWFRDGTA-----------ITL------GGRIDMHV---SSEKHSLLVRHIK 113 (245)
Q Consensus 57 ~~~~~~~g~~~~l~C~~~~~~~~---~~~w~~~~~~-----------~~~------~~~~~~~~---~~~~~~l~i~~~~ 113 (245)
..+.+.+|+++.|.|.+.+.+.+ .+.|++++.. +.. ..+..... ......|.|.+++
T Consensus 12 ~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~ 91 (226)
T 4f80_A 12 GPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVT 91 (226)
T ss_dssp SCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCC
T ss_pred CCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCc
Confidence 34668899999999999876554 6999986532 110 11222211 1235689999999
Q ss_pred CCCCeEEEEEEEeCCceeEEEEEEEecCCCCccccCccccCCCeeEEEEEeCCCCCceEEEEEEEeec--CCCCeEEEee
Q psy12131 114 DTDFGNYMCQASNNLGSSQQFIQLSGIPNIPVFQKSSRRLGPDGYRLVWQVDTYSGIIQYLLKFRERE--ELTPWRNIVI 191 (245)
Q Consensus 114 ~~d~g~y~C~~~n~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 191 (245)
.+|.|.|.|.+.|..|.....+.+...+.+...........+..+.|.|.+.+..|...+. |+++.+ ..........
T Consensus 92 ~~D~G~Y~C~a~n~~~~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~-W~k~~~~~~~~~~~~~~~ 170 (226)
T 4f80_A 92 ASDSGKYLCYFQDGDFYEKALVELKVAALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQ-WSNNKGENIPTVEAPVVA 170 (226)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEEEETTEEEEEEEEEEEBSCCEEE-EECTTSCBCCCEECCCEE
T ss_pred hHHCeeEEEEEECCCcEEEEEEEEeeccceecccceeeeccCCceeeEEEeccCCCCCEEE-EEECCceEcCCCceEEEE
Confidence 9999999999999999888887777665554444444557788999999996542322222 444322 0111111111
Q ss_pred CCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceEEe
Q psy12131 192 PSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYVFA 239 (245)
Q Consensus 192 ~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~~ 239 (245)
...+ .. ....+..+...+.+.|.|.|.|.+|....+..+.+.
T Consensus 171 ~~~g----~~--~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v~ 212 (226)
T 4f80_A 171 DGVG----LY--AVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISIA 212 (226)
T ss_dssp CTTS----CE--EEEEEEEECC----CEEEEEEETTTTEEEEEEECCC
T ss_pred CCCC----cE--EEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEEC
Confidence 1111 11 111122334455556667799999987666655553
No 230
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.70 E-value=2.7e-16 Score=98.33 Aligned_cols=94 Identities=19% Similarity=0.341 Sum_probs=82.5
Q ss_pred ecCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEe
Q psy12131 47 IYPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASN 126 (245)
Q Consensus 47 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 126 (245)
..+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+....++.+...+....|.|.++..+|.|.|.|.+.|
T Consensus 6 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N 85 (103)
T 3qp3_A 6 DHAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVCTN 85 (103)
T ss_dssp CEEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCCEEEeCCcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEEEEe
Confidence 35677777777788899999999999999999999999999999887788777766778899999999999999999999
Q ss_pred CCceeEEEEEEEec
Q psy12131 127 NLGSSQQFIQLSGI 140 (245)
Q Consensus 127 ~~g~~~~~~~~~~~ 140 (245)
..|.....+.|.+.
T Consensus 86 ~~G~~~~~~~l~V~ 99 (103)
T 3qp3_A 86 YKGEASDYATLDVT 99 (103)
T ss_dssp TTEEEEEEEEEEEE
T ss_pred CCCcEEEEEEEEEE
Confidence 99988887777664
No 231
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.70 E-value=6e-16 Score=112.22 Aligned_cols=126 Identities=15% Similarity=0.274 Sum_probs=86.9
Q ss_pred cceEEEeec--ceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCC------------e-EEeecceEEecCCCe
Q psy12131 2 KEIELLYNR--ESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPP------------E-VSVEKQWIHTAPDMR 66 (245)
Q Consensus 2 ~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p------------~-~~~~~~~~~~~~g~~ 66 (245)
+|+.+...+ .+|.|.+++.+|+|.|+|.+.+..+......+.|.|..++ . ....+....+.+|+.
T Consensus 65 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~ 144 (247)
T 1svz_A 65 DRFSGSGSGTDFTLKISRVEAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGET 144 (247)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTCC
T ss_pred CcEEeccCCCEEEEEECCCCHHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCc
Confidence 355554332 3699999999999999999998754322334667777543 1 222333445889999
Q ss_pred EEEEEEEeecC--CCeEEEEECC--EEe------c-----------cCCcEEEEe--cCceeEEEEccCCCCCCeEEEEE
Q psy12131 67 AEIICNVYANP--PAKVEWFRDG--TAI------T-----------LGGRIDMHV--SSEKHSLLVRHIKDTDFGNYMCQ 123 (245)
Q Consensus 67 ~~l~C~~~~~~--~~~~~w~~~~--~~~------~-----------~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C~ 123 (245)
+.|.|.+.+.+ .+.+.|++.. ... . ...++.+.. ......|.|.+++.+|.|.|.|.
T Consensus 145 v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 224 (247)
T 1svz_A 145 VKISCKATNYAFTDYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCV 224 (247)
T ss_dssp EEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEE
T ss_pred EEEEEEEcCcccCCcEEEEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEE
Confidence 99999998875 4689999852 111 0 123444433 33456899999999999999999
Q ss_pred EEeC
Q psy12131 124 ASNN 127 (245)
Q Consensus 124 ~~n~ 127 (245)
+.|.
T Consensus 225 a~n~ 228 (247)
T 1svz_A 225 RDRH 228 (247)
T ss_dssp EEEG
T ss_pred Eecc
Confidence 9985
No 232
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.70 E-value=1e-17 Score=118.74 Aligned_cols=130 Identities=16% Similarity=0.205 Sum_probs=89.3
Q ss_pred cceEEEee--cceEEEeccCCCCCEEEEEEEEcCCCCc--eeeEEEEEEe----cCCeEEeecceEEecCCCeEEEEEEE
Q psy12131 2 KEIELLYN--RESLDLDRVTLKLAGLYQCIASNNIGES--TSKNFIVNVI----YPPEVSVEKQWIHTAPDMRAEIICNV 73 (245)
Q Consensus 2 ~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~ 73 (245)
+|+.+... ...|.|.+++.+|+|.|+|.+.|..+.. ......|.|. .+|.+...+....+..|+.+.|.|.+
T Consensus 58 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~ 137 (212)
T 1nfd_E 58 ERFSGSTSGTTATLTISGAQPEDEAAYYCLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPSPEELRTNKATLVCLV 137 (212)
T ss_dssp TTEEEEEETTEEEEEETTCCGGGCSEEEEEEEETTTTEEEECCCEEEEEECCCCBCCEEECCCCCHHHHHTTEECCCEEE
T ss_pred ccEEEEeeCCEEEEEECcCCcccCEEEEEEEEcccCcccccCCceEEEEccCCCCCCEEEeeCCchHhccCCceEEEEEE
Confidence 35555543 2479999999999999999999732211 2234556663 45666554433334578999999999
Q ss_pred eec-CC-CeEEEEECCEEeccCCcEE-EEecC----ceeEEEEccCCCCCCeEEEEEEEeCCcee
Q psy12131 74 YAN-PP-AKVEWFRDGTAITLGGRID-MHVSS----EKHSLLVRHIKDTDFGNYMCQASNNLGSS 131 (245)
Q Consensus 74 ~~~-~~-~~~~w~~~~~~~~~~~~~~-~~~~~----~~~~l~i~~~~~~d~g~y~C~~~n~~g~~ 131 (245)
.|. |. +.+.|++++..+....... ..... ..+.|.|..+..+|.|.|+|.|.|..+..
T Consensus 138 ~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 202 (212)
T 1nfd_E 138 NDFYPGSATVTWKANGATINDGVKTTKPSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGETV 202 (212)
T ss_dssp EEEBSSCCEEEEEETTEEECSSCBCCCCBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTTC
T ss_pred EeeECCccEEEEEECCeEcCCCeecCCceecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCceE
Confidence 987 54 7999999998876542211 00000 12458899999999999999999987653
No 233
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.70 E-value=1.5e-15 Score=108.37 Aligned_cols=134 Identities=10% Similarity=0.172 Sum_probs=90.2
Q ss_pred cceEEEee----cceEEEeccCCCCCEEEEEEEEcCCC---C--ceeeEEEEEEec----CCeEEeecceEEecCCCeEE
Q psy12131 2 KEIELLYN----RESLDLDRVTLKLAGLYQCIASNNIG---E--STSKNFIVNVIY----PPEVSVEKQWIHTAPDMRAE 68 (245)
Q Consensus 2 ~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~~~~~---~--~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~ 68 (245)
+|+.+..+ ..+|.|.+++.+|+|.|+|.+.+..| . .....+.|.|.. +|.+...+....+..|+.+.
T Consensus 66 ~R~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~ 145 (223)
T 1dee_B 66 GRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVSCENSNPSSTVA 145 (223)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEECTTCCCSSSEEE
T ss_pred CeEEEEecCCCCEEEEEECCCCHHHCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecCCcccCCCCcEE
Confidence 47777653 34799999999999999999998653 1 112345778873 45554322222346899999
Q ss_pred EEEEEeec-CCC-eEEEEE-CCEEeccCCcE-EEEecC---ceeEEEEccCCC--CCCeEEEEEEEeCCceeEEEE
Q psy12131 69 IICNVYAN-PPA-KVEWFR-DGTAITLGGRI-DMHVSS---EKHSLLVRHIKD--TDFGNYMCQASNNLGSSQQFI 135 (245)
Q Consensus 69 l~C~~~~~-~~~-~~~w~~-~~~~~~~~~~~-~~~~~~---~~~~l~i~~~~~--~d~g~y~C~~~n~~g~~~~~~ 135 (245)
|.|.+.+. |.| .+.|++ ++..+.....+ .....+ ..+.|.|..... .|.|.|+|.+.|..+.....+
T Consensus 146 L~C~~~g~~P~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~~~~ 221 (223)
T 1dee_B 146 VGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKEKDV 221 (223)
T ss_dssp EEEEEEEEBSSCCEEEEEETTSCBCSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCCEEEEE
T ss_pred EEEEEEEEeCCCeEEEeEccCCCccceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCCCcccc
Confidence 99999886 767 999999 88766430000 000011 134677877665 678999999999988765544
No 234
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.70 E-value=1.6e-15 Score=110.57 Aligned_cols=126 Identities=13% Similarity=0.211 Sum_probs=88.0
Q ss_pred cceEEEeec--ceEEEeccCCCCCEEEEEEEEcCCCC--ceeeEEEEEEecCC---------------------eEEeec
Q psy12131 2 KEIELLYNR--ESLDLDRVTLKLAGLYQCIASNNIGE--STSKNFIVNVIYPP---------------------EVSVEK 56 (245)
Q Consensus 2 ~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~~~l~v~~~p---------------------~~~~~~ 56 (245)
+|+.+...+ .+|.|.+++.+|+|.|+|.+.+..+. .....+.|.|..+| .+...+
T Consensus 63 ~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (256)
T 3ux9_B 63 DRFSGSKSGTSASLAITGLQSEDEADYYCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVESG 142 (256)
T ss_dssp TTEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEC----------------------CCEEEEEC
T ss_pred CcEEEEccCCEEEEEECCCChhhCEEEEEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcCC
Confidence 455555433 36999999999999999999986543 12345677777654 233333
Q ss_pred ceEEecCCCeEEEEEEEeecC--CCeEEEEEC--CEEe-----------------ccCCcEEEEec--CceeEEEEccCC
Q psy12131 57 QWIHTAPDMRAEIICNVYANP--PAKVEWFRD--GTAI-----------------TLGGRIDMHVS--SEKHSLLVRHIK 113 (245)
Q Consensus 57 ~~~~~~~g~~~~l~C~~~~~~--~~~~~w~~~--~~~~-----------------~~~~~~~~~~~--~~~~~l~i~~~~ 113 (245)
...+.+|+.+.|.|.+.+.+ .+.+.|+++ +..+ ....++.+... .....|.|.+++
T Consensus 143 -~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 221 (256)
T 3ux9_B 143 -GGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLR 221 (256)
T ss_dssp -CEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCC
T ss_pred -CeEEcCCCeEEEEEEEeCCcccccEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCC
Confidence 34588999999999999876 679999985 2211 11124554432 345679999999
Q ss_pred CCCCeEEEEEEEeCC
Q psy12131 114 DTDFGNYMCQASNNL 128 (245)
Q Consensus 114 ~~d~g~y~C~~~n~~ 128 (245)
.+|.|.|.|.+.|..
T Consensus 222 ~~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 222 AEDTAVYYCARYIDF 236 (256)
T ss_dssp GGGCEEEEEEEEETT
T ss_pred hhhCEEEEEEEEcCC
Confidence 999999999999964
No 235
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.69 E-value=9.8e-16 Score=97.56 Aligned_cols=98 Identities=18% Similarity=0.287 Sum_probs=82.8
Q ss_pred cCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeC
Q psy12131 48 YPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNN 127 (245)
Q Consensus 48 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 127 (245)
.+|.+...+....+..|+.+.|.|.+.|.|.|.+.|++++..+....++.+........|.|.++..+|.|.|+|.+.|.
T Consensus 6 ~pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 85 (114)
T 2cqv_A 6 SGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVENK 85 (114)
T ss_dssp CCCEESCCCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEECS
T ss_pred CCCEEEeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEEC
Confidence 46777777778889999999999999999999999999999888777777776666789999999999999999999999
Q ss_pred CceeEEEEEEEec--CCCCc
Q psy12131 128 LGSSQQFIQLSGI--PNIPV 145 (245)
Q Consensus 128 ~g~~~~~~~~~~~--~~~p~ 145 (245)
.|.....+.|.+. |.+|.
T Consensus 86 ~g~~~~~~~l~V~~~p~~P~ 105 (114)
T 2cqv_A 86 LGSRQAQVNLTVVDKPDPPA 105 (114)
T ss_dssp SCEEECCEEEEEECSCSCCC
T ss_pred CCcEEEEEEEEEECCCCCCC
Confidence 9987776666654 44443
No 236
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.69 E-value=2.7e-15 Score=103.77 Aligned_cols=162 Identities=12% Similarity=0.170 Sum_probs=103.7
Q ss_pred EecCCCeEEEEEEEeecCCC--eEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEE
Q psy12131 60 HTAPDMRAEIICNVYANPPA--KVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 137 (245)
Q Consensus 60 ~~~~g~~~~l~C~~~~~~~~--~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~ 137 (245)
.+.+|+.+.|.|.+.+.+.| .+.|++++..+...... .....|.|. ...|.|.|.|.+.|... ....+.+
T Consensus 9 ~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~-----~~~~~l~i~--~~~d~G~Y~C~~~n~~~-~~~~l~V 80 (184)
T 3b5h_A 9 VEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALP-----GQKTEFKVD--SDDQWGEYSCVFLPEPM-GTANIQL 80 (184)
T ss_dssp EEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCC-----CSEEEEEEC--GGGCCEEEEEEEESTTS-CEEEEEE
T ss_pred EEecCCCEEEEEECCCCCCCceEEEEEeCCEEeeccccc-----CCcEEEEEe--chhhCeEEEEEEECCcC-cEEEEEE
Confidence 45689999999999988777 89999999887655422 123356666 57899999999998432 3334444
Q ss_pred EecCCCCccccCccccCCCeeEEEEEeCCCCCceEEEEEEEe---ec--C--C--CCeEEEeeCCCCCCCcceeeeEEEe
Q psy12131 138 SGIPNIPVFQKSSRRLGPDGYRLVWQVDTYSGIIQYLLKFRE---RE--E--L--TPWRNIVIPSDGSLAGPIYTQSYNI 208 (245)
Q Consensus 138 ~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~--~--~--~~~~~~~~~~~~~~~~~~~~~~~~i 208 (245)
...|.............++.+.|.|.+.+.++...+. |++. .. . . ..+ .+.... ....+.|
T Consensus 81 ~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~-W~~~~~~~~~~~~~~~~~~~-~~~~~~--------~~~~L~i 150 (184)
T 3b5h_A 81 HGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWA-WYKITDSEDKALMNGSESRF-FVSSSQ--------GRSELHI 150 (184)
T ss_dssp CCSCCCEESCSEEEECTTSCEEEEEECCCSSCCCEEE-EEECCSSSCEECCTTGGGTE-EEEEET--------TEEEEEE
T ss_pred ecCCceeecCCCcEEcCCCcEEEEEEECCCCCCCeEE-EEEcCCCCCEEeecCCCCEE-EEEecC--------CeeEEEE
Confidence 3332221111122356789999999997766333333 5552 11 0 0 111 111101 1257899
Q ss_pred cCCC-CCceEEEEEEEEecCCCCCCCcceEEe
Q psy12131 209 TGLQ-LFTQYEASVLAKNRFGWSRPSKAYVFA 239 (245)
Q Consensus 209 ~~l~-~~~~y~~~v~a~N~~G~~~~s~~~~~~ 239 (245)
.++. ..+.+.|+|.|.|.+|....+..+.+.
T Consensus 151 ~~v~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 182 (184)
T 3b5h_A 151 ENLNMEADPGQYRCNGTSSKGSDQAIITLRVR 182 (184)
T ss_dssp CSCCTTTSSEEEEEEEEETTEEEEEEEEEEEC
T ss_pred eeccccccCceEEEEEEeCCCcceEEEEEEEe
Confidence 9998 899999999999999987666555543
No 237
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.69 E-value=5.7e-16 Score=112.52 Aligned_cols=115 Identities=15% Similarity=0.254 Sum_probs=83.3
Q ss_pred eEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecC-------------------CeEEeecceEEecCCCeEEEEEE
Q psy12131 12 SLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYP-------------------PEVSVEKQWIHTAPDMRAEIICN 72 (245)
Q Consensus 12 ~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~-------------------p~~~~~~~~~~~~~g~~~~l~C~ 72 (245)
+|.|.+++.+|+|.|+|.+.+..+........|.|..+ +.+...+....+.+|+.+.|.|.
T Consensus 75 ~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~ 154 (250)
T 3esu_F 75 SLTISNLEQEDIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCK 154 (250)
T ss_dssp EEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEE
T ss_pred EEEEccCChhhCEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEE
Confidence 69999999999999999999876543344456777653 22333445567889999999999
Q ss_pred EeecC--CCeEEEEEC--CEEec-----------------cCCcEEEEec--CceeEEEEccCCCCCCeEEEEEEEe
Q psy12131 73 VYANP--PAKVEWFRD--GTAIT-----------------LGGRIDMHVS--SEKHSLLVRHIKDTDFGNYMCQASN 126 (245)
Q Consensus 73 ~~~~~--~~~~~w~~~--~~~~~-----------------~~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~~~n 126 (245)
+.+.+ .+.+.|+++ +..+. ...++.+... .....|.|.++..+|.|.|.|.+.+
T Consensus 155 ~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 155 DSGYAFSSSWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp CCSTTGGGSEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred ecCCcccCCEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 98876 679999986 32211 1134444422 3456899999999999999999997
No 238
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.68 E-value=1.5e-15 Score=110.89 Aligned_cols=165 Identities=13% Similarity=0.217 Sum_probs=114.7
Q ss_pred CCeEEeecceEEecCCCeEEEEEEEeecCCC-eEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeC
Q psy12131 49 PPEVSVEKQWIHTAPDMRAEIICNVYANPPA-KVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNN 127 (245)
Q Consensus 49 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 127 (245)
+|.+...+....+.+|+.+.|.|.+.+.|.+ .+.|++++..+... ...|.|.++..+|.|.|+|.+.|.
T Consensus 1 kP~i~~~p~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~~----------~~~l~i~~~~~~d~G~Y~C~~~~~ 70 (262)
T 3rjd_A 1 KAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTS----------TPSYRITSASVNDSGEYRCQRGLS 70 (262)
T ss_dssp CCEEEESSCCSEEETTCCEEEEEECSSCCCTTCEEEEETTEECSCC----------SSEEEESSCCGGGCEEEEEEESSS
T ss_pred CCeEecCCCcEEeeCCCeEEEEEECCCCCCCceEEEEECCEEeecc----------CCeEEEecCCcccCeEEEEEEecC
Confidence 4667777777778899999999999988888 99999999887643 346999999999999999999987
Q ss_pred CceeEEEEEEEecCCCCcccc-CccccCCCeeEEEEEeCCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEE
Q psy12131 128 LGSSQQFIQLSGIPNIPVFQK-SSRRLGPDGYRLVWQVDTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSY 206 (245)
Q Consensus 128 ~g~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (245)
.+.....+.+. ..+..... ......++.+.|.|......|...+. |+++.. ... ... ....+
T Consensus 71 ~~s~~~~l~v~--~~~~~~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~-W~~~g~---~~~-~~~----------~~~~l 133 (262)
T 3rjd_A 71 GRSDPIQLEIH--RGWLLLQVSSRVFTEGEPLALRCHAWKDKLVYNVL-YYRNGK---AFK-FFH----------WNSNL 133 (262)
T ss_dssp CCCCCEEEEEE--CSSEEEEESCSEEETTSCEEEEEEEGGGCCCEEEE-EEETTE---EEE-EEE----------ECCCE
T ss_pred CccccEEEEEe--ccceEecCCCeEEecCCeEEEEEEccCCCCCceEE-EEECCc---ccc-ccC----------CCCeE
Confidence 76655555444 22222221 12345789999999994433433333 444322 111 110 01458
Q ss_pred EecCCCCCceEEEEEEEEecCCCCCCCcceEEec
Q psy12131 207 NITGLQLFTQYEASVLAKNRFGWSRPSKAYVFAT 240 (245)
Q Consensus 207 ~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~~t 240 (245)
.|..+...+.+.|+|.|.|..|....+..+.+..
T Consensus 134 ~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~ 167 (262)
T 3rjd_A 134 TILKTNISHNGTYHCSGMGKHRYTSAGISVTVKE 167 (262)
T ss_dssp EESSCCGGGCEEEEEEEESSSEEEEECEEEEEEC
T ss_pred EEEECChhhCEEEEEEEeCCCCccccceEEEecc
Confidence 8889999999999999999987655555555553
No 239
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.68 E-value=5.5e-15 Score=104.21 Aligned_cols=164 Identities=15% Similarity=0.160 Sum_probs=107.9
Q ss_pred EEecCCCeEEEEEEEeecCCCeEEEEECCEEecc-------------------CCcEEEEecCceeEEEEccCCCCCCeE
Q psy12131 59 IHTAPDMRAEIICNVYANPPAKVEWFRDGTAITL-------------------GGRIDMHVSSEKHSLLVRHIKDTDFGN 119 (245)
Q Consensus 59 ~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~-------------------~~~~~~~~~~~~~~l~i~~~~~~d~g~ 119 (245)
..+.+|+.+.|.|...+.+.+.+.|++++..... ..++.+. ....|.|.++...|.|.
T Consensus 9 ~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~---~~~~L~i~~v~~~D~G~ 85 (208)
T 3r4d_A 9 PQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIY---SNGSLLFQMITMKDMGV 85 (208)
T ss_dssp SEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEEC---TTSCEEECSCCGGGCEE
T ss_pred ceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEe---cCCeEEEccccccCCeE
Confidence 4577999999999988888889999986532211 1122221 12479999999999999
Q ss_pred EEEEEEeCC-ceeEEEEEEEecC--CCCccccC-ccccCCCeeEEEEEeCCCCCceEEEEEEEeec--CCCCeEEEeeCC
Q psy12131 120 YMCQASNNL-GSSQQFIQLSGIP--NIPVFQKS-SRRLGPDGYRLVWQVDTYSGIIQYLLKFRERE--ELTPWRNIVIPS 193 (245)
Q Consensus 120 y~C~~~n~~-g~~~~~~~~~~~~--~~p~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 193 (245)
|+|.+.+.. +.....+.+.+.. ..|.+... .....++.+.|.|.+.+.+| .+ .|+++.. ....-..+ ..
T Consensus 86 Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~~g~~v~l~C~~~~~pp--~i-~W~~~g~~l~~~~~~~~--~~ 160 (208)
T 3r4d_A 86 YTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTTVKELDSVTLTCLSNDIGA--NI-QWLFNSQSLQLTERMTL--SQ 160 (208)
T ss_dssp EEEEEECSSCEEEEEEEEEEEECCCCCCEEEESCSSCCTTCCEEEEEECSCTTC--EE-EEEETTEECCCCSSEEE--ET
T ss_pred EEEEEEcccCceeEEEEEEEeccCCCCCEEecCCceEeeCCCEEEEEECCCCCC--ce-EEEECCEeCCCCCCeEE--cC
Confidence 999999985 5555555555543 33333322 22567889999999977654 23 2444332 11111111 11
Q ss_pred CCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceEEe
Q psy12131 194 DGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYVFA 239 (245)
Q Consensus 194 ~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~~ 239 (245)
.. ..+.|.++...+.+.|+|.|.|.+|... |..+.+.
T Consensus 161 ~~--------~~L~i~~v~~~d~G~Y~C~a~N~~g~~~-s~~~~l~ 197 (208)
T 3r4d_A 161 NN--------SILRIDPIKREDAGEYQCEISNPVSVRR-SNSIKLD 197 (208)
T ss_dssp TT--------TEEEESSCCGGGCEEEEEEEECTTCCEE-CCCEEEC
T ss_pred CC--------CEEEEeccCHHhCeEEEEEEecCCCccc-CCceeee
Confidence 11 4688999999999999999999999864 4444444
No 240
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.68 E-value=1.6e-16 Score=116.52 Aligned_cols=118 Identities=18% Similarity=0.329 Sum_probs=93.2
Q ss_pred cceEEEeccCCCCCEEEEEEEEcCC-CCc--eeeEEEEEEecCCeEEee--cceEEecCCCeEEEEEEEeecCCCeEEEE
Q psy12131 10 RESLDLDRVTLKLAGLYQCIASNNI-GES--TSKNFIVNVIYPPEVSVE--KQWIHTAPDMRAEIICNVYANPPAKVEWF 84 (245)
Q Consensus 10 ~~~L~i~~~~~~d~G~Y~C~~~~~~-~~~--~~~~~~l~v~~~p~~~~~--~~~~~~~~g~~~~l~C~~~~~~~~~~~w~ 84 (245)
.+.|.|..+..+|.|.|+|.|.|.. |.. .+..+.|.|..+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|+
T Consensus 141 ~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P~p~i~W~ 220 (265)
T 2oz4_A 141 RAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCL 220 (265)
T ss_dssp EECCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEEEEEECCGGGSCSEEEEETTCEECCCCCCEEESCCEEEEE
T ss_pred cEEEEEccccccCCceEEEEEEcCCCCCcccccccEEEEEEeCCccccccCCCccEEcCCCeEEEEeECccCCCCeEEEE
Confidence 3458999999999999999998654 552 237788999988887554 34567889999999999999999999999
Q ss_pred ECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEec
Q psy12131 85 RDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGI 140 (245)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~ 140 (245)
+++..+.... .+. .+..+|.|.|+|.|.|..|.....+.|.+.
T Consensus 221 ~~~~~~~~~g-----------~~~--~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 263 (265)
T 2oz4_A 221 KDGTFPLPIG-----------ESV--TVTRDLEGTYLCRARSTQGEVTREVTVNVL 263 (265)
T ss_dssp ETTTEECCTT-----------SCE--ECCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred ECCcccCCCC-----------cEE--EeehhhCeEEEEEEECCCCcEEEEEEEEEe
Confidence 9887322221 121 367789999999999999998888887764
No 241
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.68 E-value=6.4e-16 Score=110.76 Aligned_cols=134 Identities=12% Similarity=0.104 Sum_probs=88.4
Q ss_pred cceEEEee----cceEEEeccCCCCCEEEEEEEEcCCC------C--ceeeEEEEEEec----CCeEEeecceEEecCCC
Q psy12131 2 KEIELLYN----RESLDLDRVTLKLAGLYQCIASNNIG------E--STSKNFIVNVIY----PPEVSVEKQWIHTAPDM 65 (245)
Q Consensus 2 ~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~~~~~------~--~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~ 65 (245)
+|+.+..+ ..+|.|.+++.+|+|.|+|.+.+..| . .....+.|.|.. +|.+...+....+..|+
T Consensus 67 ~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~ 146 (228)
T 3bae_H 67 SRLTISKDTSRDMVFMKITSVDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGS 146 (228)
T ss_dssp GGEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC-----CCS
T ss_pred CcEEEEEcCCCCeEEEEEcCCCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEecccccccCCC
Confidence 46776642 35799999999999999999998654 1 111336777773 56655444333456899
Q ss_pred eEEEEEEEeec-CCC-eEEEEECCEEeccCCcEEEEecC---ceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEE
Q psy12131 66 RAEIICNVYAN-PPA-KVEWFRDGTAITLGGRIDMHVSS---EKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQ 136 (245)
Q Consensus 66 ~~~l~C~~~~~-~~~-~~~w~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 136 (245)
.+.|.|.+.+. |.| .+.|++++..+.......+...+ ..+.|.|.....++ |.|+|.+.|..+.......
T Consensus 147 ~~~l~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~~~~~ 221 (228)
T 3bae_H 147 SVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTKVDKK 221 (228)
T ss_dssp EEEEEEEEEEEBSSCCEEEEGGGTCCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred CEEEEEEEccEeCCCEEEEEeeCCcccCceEcCceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCCEEEE
Confidence 99999999886 777 99999987643211111111111 13468888887756 9999999999876554443
No 242
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.68 E-value=3.8e-16 Score=116.04 Aligned_cols=127 Identities=14% Similarity=0.234 Sum_probs=91.3
Q ss_pred cceEEEee----cceEEEeccCCCCCEEEEEEEEcCC-CCc---eeeEEEEEEec----------------CCeEEeecc
Q psy12131 2 KEIELLYN----RESLDLDRVTLKLAGLYQCIASNNI-GES---TSKNFIVNVIY----------------PPEVSVEKQ 57 (245)
Q Consensus 2 ~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~~~~-~~~---~~~~~~l~v~~----------------~p~~~~~~~ 57 (245)
+|+.+..+ ..+|.|.+++.+|+|.|+|.+.+.. |.. ......|.|.. ++.+...+.
T Consensus 88 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~ 167 (291)
T 2gki_A 88 GKATLTSDKSSSTAYMELSSLTSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPS 167 (291)
T ss_dssp TTBCEEEEGGGTEEEEEECSCCGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCS
T ss_pred CCEEEEEeCCCCEEEEEECcCCHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCC
Confidence 45555542 3569999999999999999999864 211 11234677766 334444555
Q ss_pred eEEecCCCeEEEEEEEeecCCC------eEEEEECC--E---Eec---------cCCcEEEEecCceeEEEEccCCCCCC
Q psy12131 58 WIHTAPDMRAEIICNVYANPPA------KVEWFRDG--T---AIT---------LGGRIDMHVSSEKHSLLVRHIKDTDF 117 (245)
Q Consensus 58 ~~~~~~g~~~~l~C~~~~~~~~------~~~w~~~~--~---~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~ 117 (245)
.+.+.+|+.+.|.|.+.+.+.+ .+.|++.. . .+. ...++..........|.|.++..+|.
T Consensus 168 ~~~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds 247 (291)
T 2gki_A 168 SLAVSAGEKVTMSCKSSQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDL 247 (291)
T ss_dssp EEEEETTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEEEcCCCcEEEEEEcCCccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHC
Confidence 6778899999999999887765 89999852 2 111 03455554445567899999999999
Q ss_pred eEEEEEEEeCC
Q psy12131 118 GNYMCQASNNL 128 (245)
Q Consensus 118 g~y~C~~~n~~ 128 (245)
|.|.|.+.|..
T Consensus 248 G~Y~C~a~~~~ 258 (291)
T 2gki_A 248 AVYYCKQSYYH 258 (291)
T ss_dssp EEEEEEEEETT
T ss_pred EEEEEEEccCC
Confidence 99999999854
No 243
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.68 E-value=5e-17 Score=116.93 Aligned_cols=133 Identities=14% Similarity=0.192 Sum_probs=90.6
Q ss_pred ceEEEe--ecceEEEeccCCCCCEEEEEEEEcCCCC--ceeeEEEEEEe----cCCeEEeecceEEecCCCeEEEEEEEe
Q psy12131 3 EIELLY--NRESLDLDRVTLKLAGLYQCIASNNIGE--STSKNFIVNVI----YPPEVSVEKQWIHTAPDMRAEIICNVY 74 (245)
Q Consensus 3 ~~~~~~--~~~~L~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~ 74 (245)
|+.+.. +..+|.|.+++.+|+|.|+|.+.+..+. .....+.|.|. .+|.+...+.......|+.+.|.|.+.
T Consensus 81 r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~ 160 (234)
T 2j6e_L 81 RFSGSKSGTSASLAISGLRSEDEADYYCATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLIS 160 (234)
T ss_dssp TEEEEEETTEEEEEEESCCSTTCSEEEEEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEECCCHHHHTTSCCCEEECCC
T ss_pred cEEEEecCCeEEEEECCCCHHHCEEEEEEEEcCCcceeEecCCEEEEEecCCCCCCcccccCCChhHhcCCceEEEEEEE
Confidence 555543 2347999999999999999999998762 12234556663 355554433322334688999999998
Q ss_pred ecCC--CeEEEEECCEEeccCCcEE-EE--ecC---ceeEEEEccCCCCCCeEEEEEEEeCCceeEEEE
Q psy12131 75 ANPP--AKVEWFRDGTAITLGGRID-MH--VSS---EKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFI 135 (245)
Q Consensus 75 ~~~~--~~~~w~~~~~~~~~~~~~~-~~--~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 135 (245)
+.++ +.+.|++++..+....... .. .++ ..+.|.|.....+|.|.|+|.+.|..+...+++
T Consensus 161 g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 229 (234)
T 2j6e_L 161 DFFPGAVTVAWKADGAPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 229 (234)
T ss_dssp BCSSCCCEEEEEETTEECCSSEEECCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCCCEEE
T ss_pred EEcCCceEEEEEECCEECCCCccccCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCceEEec
Confidence 8544 3899999998876432110 00 011 235788899989999999999999877654444
No 244
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.68 E-value=1.5e-15 Score=110.69 Aligned_cols=120 Identities=17% Similarity=0.197 Sum_probs=87.2
Q ss_pred cceEEEeccCCCCCEEEEEEEEcCCCCc---eeeEEEEEEec--------------------CCeEEeecceEEecCCCe
Q psy12131 10 RESLDLDRVTLKLAGLYQCIASNNIGES---TSKNFIVNVIY--------------------PPEVSVEKQWIHTAPDMR 66 (245)
Q Consensus 10 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~---~~~~~~l~v~~--------------------~p~~~~~~~~~~~~~g~~ 66 (245)
..+|.|.+++.+|+|.|+|.+.+..+.. ......|.|.. +|.+...+....+.+|+.
T Consensus 75 ~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~ 154 (256)
T 3tf7_C 75 SFHLRKASVHRSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGEN 154 (256)
T ss_dssp EEEEEESSCCGGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEETTCC
T ss_pred EEEEEECCCCcccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCc
Confidence 3469999999999999999999875421 22345667664 566777777778889999
Q ss_pred EEEEEEEeecCCCeEEEEECC--EE---ec------------cCCcEEEEe-cCceeEEEEccCCCCCCeEEEEEEEeCC
Q psy12131 67 AEIICNVYANPPAKVEWFRDG--TA---IT------------LGGRIDMHV-SSEKHSLLVRHIKDTDFGNYMCQASNNL 128 (245)
Q Consensus 67 ~~l~C~~~~~~~~~~~w~~~~--~~---~~------------~~~~~~~~~-~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 128 (245)
+.|.|.+.+. .+.+.|++.. .. +. ...++.+.. ......|.|.++..+|.|.|.|.+.|..
T Consensus 155 v~L~C~~~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~ 233 (256)
T 3tf7_C 155 VTLSCRQTNS-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAP 233 (256)
T ss_dssp EEECEEECSC-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEET
T ss_pred EEEEEEcCCC-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCC
Confidence 9999999876 7799999832 11 10 012333322 2345589999999999999999999976
Q ss_pred ce
Q psy12131 129 GS 130 (245)
Q Consensus 129 g~ 130 (245)
|.
T Consensus 234 g~ 235 (256)
T 3tf7_C 234 GQ 235 (256)
T ss_dssp TE
T ss_pred Cc
Confidence 64
No 245
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.68 E-value=8.4e-15 Score=105.69 Aligned_cols=178 Identities=11% Similarity=0.154 Sum_probs=114.2
Q ss_pred cCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeC
Q psy12131 48 YPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNN 127 (245)
Q Consensus 48 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 127 (245)
.+|.+...+.. .+.+|+.++|.|.+.+ +.+.+.|++++..+..... ..........|.|.++..+|.|.|+|.+.|.
T Consensus 6 ~kP~i~~~P~~-~v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~-~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 82 (242)
T 1p6f_A 6 PKPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRP-KPPERINKVKFYIPDMNSRMAGQYSCIYRVG 82 (242)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECC-SSCTTCCEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCCEEEeeCCC-ccCCCCcEEEEEeeCC-CCcEEEEEECCCccccccc-cccCCcceeEEEecCCCcccCeEEEEEEecC
Confidence 46777766655 6789999999999864 4568999999876542100 0011224568999999999999999999886
Q ss_pred Ccee--EEEEEEEe--cCCCCcccc--CccccCCCeeEEEEEeCCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcce
Q psy12131 128 LGSS--QQFIQLSG--IPNIPVFQK--SSRRLGPDGYRLVWQVDTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPI 201 (245)
Q Consensus 128 ~g~~--~~~~~~~~--~~~~p~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (245)
.+.. ...+.+.+ ...+|.+.. ...+..|+.++|.|...+..+ .| .|+++.. .. -.......
T Consensus 83 ~~~s~~S~~~~L~V~~~~~~P~i~~~p~~~v~~G~~vtL~C~~~~~~~--~~-~w~k~g~-~~-~~~~~~~~-------- 149 (242)
T 1p6f_A 83 ELWSEPSNLLDLVVTEMYDTPTLSVHPGPEVISGEKVTFYCRLDTATS--MF-LLLKEGR-SS-HVQRGYGK-------- 149 (242)
T ss_dssp TEECCCCCCEEEEEECCSCCCEEEEESCSEEETTCEEEEEEECTTSCS--EE-EEEECSS-SC-EEEEEECS--------
T ss_pred CccccCCcceEEEeecccCCCceEccCCCccCCCCcEEEEEecCCCCC--EE-EEEECCC-cc-CccccCCC--------
Confidence 5432 22334333 233343322 133568999999999865543 33 3565543 11 11111111
Q ss_pred eeeEEEecCCCCCceEEEEEEEEecC-CCCCCCcceEEecC
Q psy12131 202 YTQSYNITGLQLFTQYEASVLAKNRF-GWSRPSKAYVFATE 241 (245)
Q Consensus 202 ~~~~~~i~~l~~~~~y~~~v~a~N~~-G~~~~s~~~~~~t~ 241 (245)
....|.|.++...+.+.|+|.|.|.. +.+..|..+.+...
T Consensus 150 ~~~~l~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~ 190 (242)
T 1p6f_A 150 VQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVT 190 (242)
T ss_dssp SEEEEEEEECCGGGCEEEEEEEEEETTEECCCCCCEEEEEE
T ss_pred ceEEEEeCCCccccCEEEEEEEECCCCcccCCCCCEEEEEe
Confidence 12678899999898999999999974 45667776655544
No 246
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.68 E-value=7.5e-16 Score=109.79 Aligned_cols=130 Identities=15% Similarity=0.190 Sum_probs=89.6
Q ss_pred cceEEEee----cceEEEeccCCCCCEEEEEEEEcCCCC--ceeeEEEEEEec----CCeEEeecceEEecCCCeEEEEE
Q psy12131 2 KEIELLYN----RESLDLDRVTLKLAGLYQCIASNNIGE--STSKNFIVNVIY----PPEVSVEKQWIHTAPDMRAEIIC 71 (245)
Q Consensus 2 ~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C 71 (245)
+|+.+..+ ..+|+|.+++.+|+|.|.|.+.+..+. .....+.|.|.. +|.+...+ ...+..|+.+.|.|
T Consensus 66 ~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~-~~~~~~g~~v~L~C 144 (220)
T 2fbj_H 66 DKFIISRDNAKNSLYLQMSKVRSEDTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLT-LPPALSSDPVIIGC 144 (220)
T ss_dssp TTEEEEECSSSCEEEEEECSCCGGGCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEEC-CCSSSCCSSEEEEE
T ss_pred CcEEEEeeCCCCEEEEEECCCChhhCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEee-cccccCCCcEEEEE
Confidence 57777643 357999999999999999999986542 112345777764 45554444 33456899999999
Q ss_pred EEeec-CC--CeEEEEECCEEecc-CCcEEEEecCc---eeEEEEccCCCCCCeEEEEEEEeCCceeE
Q psy12131 72 NVYAN-PP--AKVEWFRDGTAITL-GGRIDMHVSSE---KHSLLVRHIKDTDFGNYMCQASNNLGSSQ 132 (245)
Q Consensus 72 ~~~~~-~~--~~~~w~~~~~~~~~-~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~~~n~~g~~~ 132 (245)
.+.+. |. +.+.|++++..+.. .........+. .+.|.|......|.|.|+|.+.|..+...
T Consensus 145 ~~~g~~P~~~~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 145 LIHDYFPSGTMNVTWGKSGKDITTVNFPPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp EEEEEBSCCCEEEEESCCCSSCEEEECCCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred EEEeEECCCcEEEEEecCCEecceEecCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 99886 66 69999998865421 00001111111 23588888888899999999999987644
No 247
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.68 E-value=2.2e-16 Score=114.88 Aligned_cols=129 Identities=16% Similarity=0.221 Sum_probs=88.7
Q ss_pred cceEEEeec--ceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEec---CCeEEeecceEEecCCCeEEEEEEEeec
Q psy12131 2 KEIELLYNR--ESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIY---PPEVSVEKQWIHTAPDMRAEIICNVYAN 76 (245)
Q Consensus 2 ~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~ 76 (245)
+|+.+...+ .+|.|.+++.+|+|.|+|.+.+..+........|.|.. +|.+...+....+..|+.+.|.|.+.+.
T Consensus 98 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~ 177 (252)
T 3bkj_L 98 DRFSGSGSGTDFTLRISRVEAEDLGVYYCFQASLVPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNF 177 (252)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCEEEEEEECSBSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHHTEEEEEEEEEEE
T ss_pred CceEEEccCCEEEEEECCCCcccCEEEEEEEEcCCccEECCCEEEEEeCCCcCcEEEEeCCChhhcCCCcEEEEEEEeeE
Confidence 355555432 36999999999999999999987553223345677764 5666654433334468899999999884
Q ss_pred -CCC-eEEEEECCEEeccCCcEE--EEe-cC----ceeEEEEccCCCCCCeEEEEEEEeCCce
Q psy12131 77 -PPA-KVEWFRDGTAITLGGRID--MHV-SS----EKHSLLVRHIKDTDFGNYMCQASNNLGS 130 (245)
Q Consensus 77 -~~~-~~~w~~~~~~~~~~~~~~--~~~-~~----~~~~l~i~~~~~~d~g~y~C~~~n~~g~ 130 (245)
|.+ .+.|++++..+....... ... .. ..+.|.|..+..+|.|.|+|.+.|....
T Consensus 178 ~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 240 (252)
T 3bkj_L 178 YPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 240 (252)
T ss_dssp BSSCCEEEEEETTEEECSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCS
T ss_pred eCCCcEEEEEECCeecCCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCC
Confidence 443 799999998775441110 000 11 1246889999888999999999997644
No 248
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.68 E-value=2e-15 Score=93.60 Aligned_cols=93 Identities=24% Similarity=0.344 Sum_probs=81.0
Q ss_pred cCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeC
Q psy12131 48 YPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNN 127 (245)
Q Consensus 48 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 127 (245)
.+|.+...+....+..|+.+.|.|.+.+.|.|.+.|++++..+....++.+...+....|.|.++..+|.|.|.|.+.|.
T Consensus 5 ~~P~i~~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 84 (99)
T 3puc_A 5 SKPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVKNS 84 (99)
T ss_dssp EEEEEEECCCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCCEEEecCccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEEEEeC
Confidence 45667677777888999999999999999999999999999988878888777667778999999999999999999999
Q ss_pred CceeEEEEEEEec
Q psy12131 128 LGSSQQFIQLSGI 140 (245)
Q Consensus 128 ~g~~~~~~~~~~~ 140 (245)
.|.....+.|.+.
T Consensus 85 ~g~~~~~~~l~V~ 97 (99)
T 3puc_A 85 AGSVSSSCKLTIK 97 (99)
T ss_dssp TEEEEEEEEEEEE
T ss_pred CCcEeEEEEEEEE
Confidence 9988877776653
No 249
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.68 E-value=5.4e-18 Score=132.93 Aligned_cols=169 Identities=11% Similarity=0.101 Sum_probs=103.7
Q ss_pred ceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEec------------CCeEEeecceEE--ecCCCeEEEEEEEeec
Q psy12131 11 ESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIY------------PPEVSVEKQWIH--TAPDMRAEIICNVYAN 76 (245)
Q Consensus 11 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~------------~p~~~~~~~~~~--~~~g~~~~l~C~~~~~ 76 (245)
+.|.|.+++.+| |.|+|.|.|..+. ......+.+.. .|.+...+.... +.+|+.+.|.|.+.|.
T Consensus 180 s~L~i~~~~~~d-g~Y~C~a~n~~~~-~~~~~~~~~~~~~~~v~~~~~~~~p~v~~~~p~~~~~v~~G~~~~L~C~~~g~ 257 (434)
T 1igy_B 180 SSVTVPSSPRPS-ETVTCNVAHPASS-TKVDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDTLLITVTPKVTCVVVDI 257 (434)
T ss_dssp EEEEEETTTTTS-SCCEEEEECTTTT-CCEEEECCCCCCCCCCCCCCCSSSCCEEEECCCHHHHHSTTSCCEEEEEECCC
T ss_pred EEEEEcchhcCC-CcEEEEEEeCCCC-ccceeeccCCCCCCccccCCCCcCcEEEEeCCChHHhcccCCCcEEEEEEecc
Confidence 459999999999 9999999998876 23333332221 144433332222 7789999999999987
Q ss_pred C----CCeEEEEECCEEeccCCcEEE--EecC---ceeEEEEccCCCCCCeEEEEEEEeCCceeE--EEEEEE-ecCCCC
Q psy12131 77 P----PAKVEWFRDGTAITLGGRIDM--HVSS---EKHSLLVRHIKDTDFGNYMCQASNNLGSSQ--QFIQLS-GIPNIP 144 (245)
Q Consensus 77 ~----~~~~~w~~~~~~~~~~~~~~~--~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~--~~~~~~-~~~~~p 144 (245)
+ .+.+.|++++..+........ ...+ ..+.|.|..+..+|.|.|.|.+.|..|... ..+.+. ....+|
T Consensus 258 ~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P 337 (434)
T 1igy_B 258 SKDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTKGKPRAP 337 (434)
T ss_dssp CSSCCCCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCCBCCSSCSSCCCCCCCCCCSCCBCC
T ss_pred ccCCCCeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEEEECCCCCCceeEEEeccCCCCcCC
Confidence 4 358999998876543211110 0111 234689999999999999999999887542 233221 122344
Q ss_pred ccccC---ccccCCCeeEEEEEeCCCCCceEEEEEEEeec
Q psy12131 145 VFQKS---SRRLGPDGYRLVWQVDTYSGIIQYLLKFRERE 181 (245)
Q Consensus 145 ~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 181 (245)
.+... .....+..+.|.|.+.+..|..--..|+++..
T Consensus 338 ~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~ 377 (434)
T 1igy_B 338 QVYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQSDGQ 377 (434)
T ss_dssp CCEEECCCSSSSSSSEEEEEEEEEEEBCSCEEEEEEETTS
T ss_pred EEEEECCCHHHhcCCcEEEEEEEEeeECCCeEEEEEECCE
Confidence 33221 11235667999999966433211233555543
No 250
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.67 E-value=7.5e-16 Score=112.06 Aligned_cols=114 Identities=16% Similarity=0.207 Sum_probs=83.7
Q ss_pred cceEEEeccCCCCCEEEEEEEEcCCC----CceeeEEEEEEec---CCeEEeecceEEecCCCeEEEEEEEeecCCCeEE
Q psy12131 10 RESLDLDRVTLKLAGLYQCIASNNIG----ESTSKNFIVNVIY---PPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVE 82 (245)
Q Consensus 10 ~~~L~i~~~~~~d~G~Y~C~~~~~~~----~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~ 82 (245)
...|.|.+++.+|+|.|+|.+.+... ...+..+.|.|.. +|.+...+. ..+.+|++++|.|.+.+. .+.+.
T Consensus 61 ~~~L~I~~v~~~DsG~Y~C~a~~~~~~~~~s~~S~~~~L~V~~~~~~P~l~~~p~-~~V~~G~~vtL~C~~~~~-~~~~~ 138 (257)
T 1b6u_A 61 KANFSIGPMMQDLAGTYRCYGSVTHSPYQLSAPSDPLDIVITGLYEKPSLSAQPG-PTVLAGESVTLSCSSRSS-YDMYH 138 (257)
T ss_dssp EEEEEECSCCTTTCEEEEEEEECSSCTTSCCCCCCCEEEEEECSSCCCEEECSSC-TTCBTTCEEEEEEECSSC-CSEEE
T ss_pred eEEEEeecCCcccCEEEEEeEeccCCCccccccCCCEEEecccCCCCcceEccCC-CccCCCCEEEEEEeCCCC-CcEEE
Confidence 45699999999999999999986431 2246778888874 466655554 357899999999998765 47899
Q ss_pred EEECCEEeccCCcEEEEe-cCceeEEEEccCCCCCCeEEEEEEEeC
Q psy12131 83 WFRDGTAITLGGRIDMHV-SSEKHSLLVRHIKDTDFGNYMCQASNN 127 (245)
Q Consensus 83 w~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~g~y~C~~~n~ 127 (245)
|++++..+.......... ......|.|.++. |.|.|+|.+.+.
T Consensus 139 w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~--D~G~Y~C~a~~~ 182 (257)
T 1b6u_A 139 LSREGEAHERRFSAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFR 182 (257)
T ss_dssp EEETTSSCEECCBCBCCSSSCCBEEEEEEECC--SCEEEEEEEECS
T ss_pred EEECCcccCcccccccccCCceeEEEEecccc--cCEEEEEEEEcC
Confidence 999987655432211111 1135689999998 999999999975
No 251
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.67 E-value=7.5e-16 Score=113.81 Aligned_cols=126 Identities=16% Similarity=0.314 Sum_probs=91.5
Q ss_pred cceEEEeec----ceEEEeccCCCCCEEEEEEEEcC--------CCCceeeEEEEEEec---------------CCeEEe
Q psy12131 2 KEIELLYNR----ESLDLDRVTLKLAGLYQCIASNN--------IGESTSKNFIVNVIY---------------PPEVSV 54 (245)
Q Consensus 2 ~~~~~~~~~----~~L~i~~~~~~d~G~Y~C~~~~~--------~~~~~~~~~~l~v~~---------------~p~~~~ 54 (245)
+|+.+..+. .+|.|.+++.+|+|.|+|.+.+. ..........|.|.. +|.+..
T Consensus 66 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~ 145 (280)
T 3fku_X 66 GRVTITADQSTRTAYMDLRSLRSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQ 145 (280)
T ss_dssp TTCEEEEETTTTEEEEEECSCCSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBC
T ss_pred CcEEEEEeCCCCEEEEEECCCChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEe
Confidence 466666443 46999999999999999999986 111123345667766 455555
Q ss_pred ecceEEecCCCeEEEEEEEee-cC-CCeEEEEEC--CEEec------------cCCcEEEEecCceeEEEEccCCCCCCe
Q psy12131 55 EKQWIHTAPDMRAEIICNVYA-NP-PAKVEWFRD--GTAIT------------LGGRIDMHVSSEKHSLLVRHIKDTDFG 118 (245)
Q Consensus 55 ~~~~~~~~~g~~~~l~C~~~~-~~-~~~~~w~~~--~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~g 118 (245)
.+. ..+.+|+++.|.|.+.+ .+ .+.+.|++. +.... ...++.....+....|.|.+++.+|.|
T Consensus 146 ~p~-~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG 224 (280)
T 3fku_X 146 PPS-VSKGLRQTATLTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEA 224 (280)
T ss_dssp CSE-EEECTTCCEEEEEECCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCS
T ss_pred CCc-EEEecCCCEEEEEEecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCE
Confidence 555 78899999999999987 43 378999872 22111 124555555556678999999999999
Q ss_pred EEEEEEEeCC
Q psy12131 119 NYMCQASNNL 128 (245)
Q Consensus 119 ~y~C~~~n~~ 128 (245)
.|.|.+.+..
T Consensus 225 ~Y~C~~~~~~ 234 (280)
T 3fku_X 225 DYYCSTWDSS 234 (280)
T ss_dssp EEEEEEEETT
T ss_pred EEEEEEecCC
Confidence 9999999875
No 252
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.67 E-value=1.6e-15 Score=95.46 Aligned_cols=95 Identities=24% Similarity=0.418 Sum_probs=82.5
Q ss_pred ecCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEe
Q psy12131 47 IYPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASN 126 (245)
Q Consensus 47 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 126 (245)
..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+....++.+...+....|.|.++..+|.|.|.|.+.|
T Consensus 11 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n 90 (107)
T 3irg_B 11 GSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARN 90 (107)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCCeeEcCCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEEEc
Confidence 35778877777888999999999999999999999999999988877777766666667899999999999999999999
Q ss_pred CCceeEEEEEEEecC
Q psy12131 127 NLGSSQQFIQLSGIP 141 (245)
Q Consensus 127 ~~g~~~~~~~~~~~~ 141 (245)
..|.....+.|.+..
T Consensus 91 ~~g~~~~~~~l~V~~ 105 (107)
T 3irg_B 91 AAGEAYAAAAVTVLE 105 (107)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCcEEEEEEEEEEc
Confidence 999888877777653
No 253
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.67 E-value=2.3e-14 Score=114.61 Aligned_cols=173 Identities=9% Similarity=-0.007 Sum_probs=92.4
Q ss_pred EecCCCeEEEEEEEeecCCC--eEEEEECCEEeccCCcE--EEE-ecC---ceeEEEEccCCCCCCeEEEEEEEeCCcee
Q psy12131 60 HTAPDMRAEIICNVYANPPA--KVEWFRDGTAITLGGRI--DMH-VSS---EKHSLLVRHIKDTDFGNYMCQASNNLGSS 131 (245)
Q Consensus 60 ~~~~g~~~~l~C~~~~~~~~--~~~w~~~~~~~~~~~~~--~~~-~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~ 131 (245)
.+..|+.+.|.|.+.|..++ .+.|++++..+...... ... .++ ..+.|.|......|.|.|+|.+.|..+..
T Consensus 308 ~~~~g~~~~L~C~v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~~ 387 (512)
T 1zvo_C 308 DLWLRDKATFTCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLPP 387 (512)
T ss_pred HhccCCceEEEEEEeceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCCC
Confidence 34579999999999886443 89999999875521110 011 111 12468898888889999999999987654
Q ss_pred E-EEEEEEe-c--CCCCccccCccccCCCeeE-EEEEeCCCCCceEEEEEEEeec--CCCCeEE--EeeCCCCCCCccee
Q psy12131 132 Q-QFIQLSG-I--PNIPVFQKSSRRLGPDGYR-LVWQVDTYSGIIQYLLKFRERE--ELTPWRN--IVIPSDGSLAGPIY 202 (245)
Q Consensus 132 ~-~~~~~~~-~--~~~p~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~ 202 (245)
. ..+.... . +.+|..........+..+. |.|.+.+..|......|+++.. ....... ....... ..-..
T Consensus 388 ~~~~~~~~~~~~~~~~p~v~~~~~~~~~~~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~~~dg--~~~~~ 465 (512)
T 1zvo_C 388 QRLMALREPAAQAPVKLSLNLLASSDPPEAASWLLCEVSGFSPPNILLMWLEDQREVNTSGFAPARPPPQPGS--TTFWA 465 (512)
T ss_pred CceeEEeecCCCCCCCCEEEEEccCcCCCCceEEEEEEeeeCCCCcEEEEEECCeECcCccccccceeECCCC--CEEEE
Confidence 2 2222211 1 2334332221112577889 9999976433322233555533 1111110 0011110 00011
Q ss_pred eeEEEecCCCCCceEEEEEEEEecCCCCCCCc
Q psy12131 203 TQSYNITGLQLFTQYEASVLAKNRFGWSRPSK 234 (245)
Q Consensus 203 ~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~ 234 (245)
...+.+......+...|.|.|.|.........
T Consensus 466 ~s~L~v~~~~~~~~g~YtC~v~h~~l~~~~~~ 497 (512)
T 1zvo_C 466 WSVLRVPAPPSPQPATYTCVVSHEDSRTLLNA 497 (512)
T ss_pred EEEEEECchhcCCCCeEEEEEEecCCCCceEE
Confidence 13345554443334455556999876654433
No 254
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.66 E-value=1.8e-16 Score=111.20 Aligned_cols=172 Identities=17% Similarity=0.135 Sum_probs=112.0
Q ss_pred ecceEEecCCCeEEEEEE-EeecCC-CeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeE
Q psy12131 55 EKQWIHTAPDMRAEIICN-VYANPP-AKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQ 132 (245)
Q Consensus 55 ~~~~~~~~~g~~~~l~C~-~~~~~~-~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~ 132 (245)
.+..+.+.+|+.+.|.|. +.+.|. +.+.|++++..+................|.|.++..+|.|.|+|.+.|..+...
T Consensus 14 ~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~ 93 (201)
T 3s97_C 14 ERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 93 (201)
T ss_dssp CCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEEGGGTEE
T ss_pred CCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEecCCCcc
Confidence 345677889999999999 888888 999999988766422211112222345799999999999999999999765443
Q ss_pred E---EEEEEecC------CCCcccc---CccccCCCeeEEEEEeCCCCCceEEEEEEEeec-CCCCeEEEeeCCCCCCCc
Q psy12131 133 Q---FIQLSGIP------NIPVFQK---SSRRLGPDGYRLVWQVDTYSGIIQYLLKFRERE-ELTPWRNIVIPSDGSLAG 199 (245)
Q Consensus 133 ~---~~~~~~~~------~~p~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 199 (245)
. .+.+.+.+ .+|.+.. ......+..+.|.|.+.+.++. .+ .|+++.. ..... ... ...
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p-~v-~W~~~~~~~~~~~-~~~-~~~----- 164 (201)
T 3s97_C 94 VFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVP-DI-RWRKVLEPMPSTA-EIS-TSG----- 164 (201)
T ss_dssp EECCCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEEEESCC-EE-EEEETTBCCCTTC-EEE-TTT-----
T ss_pred hhhcccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEccCCCCC-ce-EEEeCCCcCCCce-eec-CCC-----
Confidence 3 22322221 1222221 2234678899999999665433 22 3444433 11111 111 111
Q ss_pred ceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceEEe
Q psy12131 200 PIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYVFA 239 (245)
Q Consensus 200 ~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~~ 239 (245)
..+.|.++...+.+.|+|.|.|..|....+..+.++
T Consensus 165 ----~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 165 ----AVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp ----TEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred ----CEEEEccCChhhCEEEEEEEEecCCceeeeEEEEEe
Confidence 468899999999999999999999987665555543
No 255
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.66 E-value=8.2e-16 Score=111.56 Aligned_cols=170 Identities=11% Similarity=0.108 Sum_probs=105.4
Q ss_pred cceEEecCCCeEEEEEEEee---cCCCeEEEEECCEEec------------------------------cCCcEEEEecC
Q psy12131 56 KQWIHTAPDMRAEIICNVYA---NPPAKVEWFRDGTAIT------------------------------LGGRIDMHVSS 102 (245)
Q Consensus 56 ~~~~~~~~g~~~~l~C~~~~---~~~~~~~w~~~~~~~~------------------------------~~~~~~~~~~~ 102 (245)
+..+.+.+|+.+.|.|.+.+ .+.+.+.|++++.... ...+..+.. .
T Consensus 9 ~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~ 87 (250)
T 2fbo_J 9 HTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVAN-L 87 (250)
T ss_dssp CSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSC-T
T ss_pred CCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEecc-C
Confidence 44677889999999999998 7788999999764310 011111111 1
Q ss_pred ceeEEEEccCCCCCCeEEEEEEEeCCcee-----EEEEEEEecCC--CCccccC----ccccCCCeeEEEEEeCCCCCce
Q psy12131 103 EKHSLLVRHIKDTDFGNYMCQASNNLGSS-----QQFIQLSGIPN--IPVFQKS----SRRLGPDGYRLVWQVDTYSGII 171 (245)
Q Consensus 103 ~~~~l~i~~~~~~d~g~y~C~~~n~~g~~-----~~~~~~~~~~~--~p~~~~~----~~~~~~~~~~l~~~~~~~~~~~ 171 (245)
....|.|.++..+|.|.|.|.+.|..+.. ...+.|.+... +|..... .....+..+.|.|.+.+.++.
T Consensus 88 ~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p- 166 (250)
T 2fbo_J 88 AAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANA- 166 (250)
T ss_dssp TSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCTTC-
T ss_pred CcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCCCC-
Confidence 23479999999999999999999977643 34566665432 3333221 223468899999999775433
Q ss_pred EEEEEEEeecCCCCe------EEEe---------eCCC-CCCCcceeeeEEEecCCCCCceEEEEEEEEecCCC
Q psy12131 172 QYLLKFREREELTPW------RNIV---------IPSD-GSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGW 229 (245)
Q Consensus 172 ~~~~~~~~~~~~~~~------~~~~---------~~~~-~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~ 229 (245)
.+ .|+++.. ...+ ..+. .... ...........+.|.++...+.+.|.|.|.|.+|.
T Consensus 167 ~v-~W~k~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~ 238 (250)
T 2fbo_J 167 NV-TWYTGPT-FFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGE 238 (250)
T ss_dssp EE-EEEEEEE-CSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSSG
T ss_pred ee-EEEeCCC-cccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCCccc
Confidence 23 3555543 1111 0000 0000 00000001157899999999999999999997763
No 256
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.66 E-value=9.8e-15 Score=104.82 Aligned_cols=138 Identities=14% Similarity=0.211 Sum_probs=87.4
Q ss_pred cceEEEee----cceEEEeccCCCCCEEEEEEEEc--CCCC---ceeeEEEEEEec----CCeEEeecceEEecCC-CeE
Q psy12131 2 KEIELLYN----RESLDLDRVTLKLAGLYQCIASN--NIGE---STSKNFIVNVIY----PPEVSVEKQWIHTAPD-MRA 67 (245)
Q Consensus 2 ~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~~--~~~~---~~~~~~~l~v~~----~p~~~~~~~~~~~~~g-~~~ 67 (245)
+|+.+..+ ..+|+|.+++.+|+|.|+|.+.+ ..+. .......|.|.. +|.+........+..| +.+
T Consensus 65 ~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~~~~g~~~v 144 (232)
T 1dn0_B 65 SRVTISVDTSKNQFSLKLSSVTAADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVSCENSPSDTSSV 144 (232)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEECC------CCSE
T ss_pred CeEEEEEeCCCCEEEEEECCCCcccCEEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEeccccccCCCCCcE
Confidence 57777643 23799999999999999999984 2111 122345778865 3555432222234467 999
Q ss_pred EEEEEEeec-CCC-eEEEEE-CCEEeccCCcE-EEEecC---ceeEEEEccCCC--CCCeEEEEEEEeCCceeEEEEEEE
Q psy12131 68 EIICNVYAN-PPA-KVEWFR-DGTAITLGGRI-DMHVSS---EKHSLLVRHIKD--TDFGNYMCQASNNLGSSQQFIQLS 138 (245)
Q Consensus 68 ~l~C~~~~~-~~~-~~~w~~-~~~~~~~~~~~-~~~~~~---~~~~l~i~~~~~--~d~g~y~C~~~n~~g~~~~~~~~~ 138 (245)
.|.|.+.+. |.+ .+.|++ ++..+.....+ .....+ ..+.|.|..... .|.|.|+|.+.|..+.......+.
T Consensus 145 ~L~C~~~g~~P~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~~~~~~i~ 224 (232)
T 1dn0_B 145 AVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGNKEKNVPLP 224 (232)
T ss_dssp EEEEEEEEEBSSCCEEEEEETTSCEECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCCEEEEEECC
T ss_pred EEEEEEEEEeCCCeEEEEEcCCCCceeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCCcceeEecC
Confidence 999999886 776 999999 88776430000 000111 134688888776 689999999999988766655544
Q ss_pred e
Q psy12131 139 G 139 (245)
Q Consensus 139 ~ 139 (245)
+
T Consensus 225 ~ 225 (232)
T 1dn0_B 225 V 225 (232)
T ss_dssp C
T ss_pred C
Confidence 3
No 257
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.66 E-value=4.6e-15 Score=105.75 Aligned_cols=123 Identities=17% Similarity=0.258 Sum_probs=86.9
Q ss_pred cceEEEeec----ceEEEeccCCCCCEEEEEEEEcCCC-CceeeEEEEEEe----cCCeEEe-ecceEEecCCCeEEEEE
Q psy12131 2 KEIELLYNR----ESLDLDRVTLKLAGLYQCIASNNIG-ESTSKNFIVNVI----YPPEVSV-EKQWIHTAPDMRAEIIC 71 (245)
Q Consensus 2 ~~~~~~~~~----~~L~i~~~~~~d~G~Y~C~~~~~~~-~~~~~~~~l~v~----~~p~~~~-~~~~~~~~~g~~~~l~C 71 (245)
+|+++..+. .+|.|.+++.+|+|.|+|.+.+... ........|.|. .+|.+.. .+... ..|+.+.|.|
T Consensus 68 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~--~~g~~v~L~C 145 (221)
T 3m8o_H 68 GRLTISRDDSKNTAFLQMNSLKSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSLCST--QPDGNVVIAC 145 (221)
T ss_dssp TSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEECCSC--CCTTEEEEEE
T ss_pred ccEEEEecCCCCEEEEEECCCCHHHCEEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEecCccc--ccCCCEEEEE
Confidence 577776543 3699999999999999999998641 223344566775 2455542 22222 6899999999
Q ss_pred EEee-cCC--CeEEEEECCEEec----------cCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCcee
Q psy12131 72 NVYA-NPP--AKVEWFRDGTAIT----------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSS 131 (245)
Q Consensus 72 ~~~~-~~~--~~~~w~~~~~~~~----------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~ 131 (245)
.+.+ .|. +.+.|++++..+. .+..+.+ .+.|.|......|.|.|+|.+.+..+..
T Consensus 146 ~~~~~~P~~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~-----~s~L~i~~~~~~d~g~ytC~v~~~~~~~ 213 (221)
T 3m8o_H 146 LVQGFFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTT-----SSQLTLPATQCLAGKSVTCHVKHYTNPS 213 (221)
T ss_dssp EEEEEBSSCSEEEEESCCSTTCEEEECCCEECSSSSCEEE-----EEEEEEEGGGSCTTCEEEEEEEETTSCC
T ss_pred EEEeeECCCCEEEEEEECCEECceEEcCceeeCCCCcEEE-----EEEEEECHHHcCCCCeEEEEEEECCCCc
Confidence 9998 665 3899999886552 1222222 2368899888889999999999987654
No 258
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.66 E-value=5.9e-15 Score=91.43 Aligned_cols=93 Identities=20% Similarity=0.276 Sum_probs=78.4
Q ss_pred cCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEE-ecCceeEEEEccCCCCCCeEEEEEEEe
Q psy12131 48 YPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMH-VSSEKHSLLVRHIKDTDFGNYMCQASN 126 (245)
Q Consensus 48 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~d~g~y~C~~~n 126 (245)
.+|.+...+....+..|+.+.|.|.+.|.|.|.+.|++++..+....++.+. .......|.|.++..+|.|.|+|.+.|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N 83 (99)
T 1g1c_A 4 EAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAIN 83 (99)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCceEecCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEE
Confidence 3677777777788899999999999999999999999999988876665543 345567899999999999999999999
Q ss_pred CCceeEEEEEEEec
Q psy12131 127 NLGSSQQFIQLSGI 140 (245)
Q Consensus 127 ~~g~~~~~~~~~~~ 140 (245)
..|.....+.|.+.
T Consensus 84 ~~g~~~~~~~l~V~ 97 (99)
T 1g1c_A 84 IAGETSSHAFLLVQ 97 (99)
T ss_dssp TTEEEEEEEEEEEE
T ss_pred CCCcEEEEEEEEEe
Confidence 99988887777654
No 259
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.66 E-value=7.9e-16 Score=110.05 Aligned_cols=129 Identities=13% Similarity=0.156 Sum_probs=86.8
Q ss_pred cceEEEee----cceEEEeccCCCCCEEEEEEEEcCCC-----C--ceeeEEEEEEec----CCeEEeecceEEecCCCe
Q psy12131 2 KEIELLYN----RESLDLDRVTLKLAGLYQCIASNNIG-----E--STSKNFIVNVIY----PPEVSVEKQWIHTAPDMR 66 (245)
Q Consensus 2 ~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~~~~~-----~--~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~ 66 (245)
+|+.+..+ ..+|.|.+++.+|+|.|+|.+.+..| . .....+.|.|.. +|.+........+..|+.
T Consensus 66 ~R~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~ 145 (225)
T 1op3_H 66 GRFTVSRDDLEDFVYLQMHKMRVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSKSTSGGT 145 (225)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCTTCCCCCE
T ss_pred CceEEEecCCCCEEEEEECCCChhhCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccccccCCCc
Confidence 46777643 35799999999999999999998764 1 112345777774 355543322223467999
Q ss_pred EEEEEEEeec-CCC-eEEEEECCEEeccC-CcEEEEecC---ceeEEEEccCCCCCCeEEEEEEEeCCcee
Q psy12131 67 AEIICNVYAN-PPA-KVEWFRDGTAITLG-GRIDMHVSS---EKHSLLVRHIKDTDFGNYMCQASNNLGSS 131 (245)
Q Consensus 67 ~~l~C~~~~~-~~~-~~~w~~~~~~~~~~-~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~ 131 (245)
+.|.|.+.+. |.| .+.|++++..+... ........+ ..+.|.|......| |.|+|.+.|..+..
T Consensus 146 v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~ 215 (225)
T 1op3_H 146 AALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNT 215 (225)
T ss_dssp EEEEEEEEEEBSSCCEEECCTTSCCTTCEECCCEECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGGTE
T ss_pred EEEEEEEEeEECCCeEEEEecCCCcCCeEecCceeCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCCCc
Confidence 9999999986 766 99999988653210 000011111 13468898888778 99999999976543
No 260
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.66 E-value=3.5e-15 Score=109.51 Aligned_cols=126 Identities=15% Similarity=0.222 Sum_probs=84.5
Q ss_pred cceEEEee--cceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCe-----------------------EEeec
Q psy12131 2 KEIELLYN--RESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPE-----------------------VSVEK 56 (245)
Q Consensus 2 ~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~-----------------------~~~~~ 56 (245)
+|+.+... ..+|+|.+++.+|+|.|+|.+.+..+........|.|..++. ....+
T Consensus 79 ~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~ 158 (268)
T 1x9q_A 79 DRFSGSGSGTDFTLKINRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDET 158 (268)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEEEE
T ss_pred ccEEEEcCCCEEEEEECCCChhHCEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECC
Confidence 46666543 346999999999999999999987543222345566654321 11223
Q ss_pred ceEEecCCCeEEEEEEEeecCC--CeEEEEEC--CEEe-------------------ccCCcEEEEec--CceeEEEEcc
Q psy12131 57 QWIHTAPDMRAEIICNVYANPP--AKVEWFRD--GTAI-------------------TLGGRIDMHVS--SEKHSLLVRH 111 (245)
Q Consensus 57 ~~~~~~~g~~~~l~C~~~~~~~--~~~~w~~~--~~~~-------------------~~~~~~~~~~~--~~~~~l~i~~ 111 (245)
....+.+|+.+.|.|.+.+.+. +.+.|++. +... ....++.+... .....|.|.+
T Consensus 159 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 238 (268)
T 1x9q_A 159 GGGLVQPGGAMKLSCVTSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNN 238 (268)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECS
T ss_pred CceEecCCCcEEEEEEecCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECC
Confidence 4567889999999999988764 78999974 2211 01234554432 2356899999
Q ss_pred CCCCCCeEEEEEEEeC
Q psy12131 112 IKDTDFGNYMCQASNN 127 (245)
Q Consensus 112 ~~~~d~g~y~C~~~n~ 127 (245)
++.+|.|.|.|.+.+.
T Consensus 239 v~~~DsG~Y~C~a~~~ 254 (268)
T 1x9q_A 239 LRVEDTGIYYCTGASY 254 (268)
T ss_dssp CCGGGCEEEEEEEEET
T ss_pred CCHHHCEEEEEEEccC
Confidence 9999999999999874
No 261
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.66 E-value=6.8e-15 Score=107.73 Aligned_cols=126 Identities=15% Similarity=0.176 Sum_probs=88.3
Q ss_pred cceEEEee--cceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCC------------------eEE-eecceEE
Q psy12131 2 KEIELLYN--RESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPP------------------EVS-VEKQWIH 60 (245)
Q Consensus 2 ~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p------------------~~~-~~~~~~~ 60 (245)
+|+.+..+ ..+|.|.+++.+|+|.|+|.+.+..+......+.|.|..+| .+. ..+....
T Consensus 70 ~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (264)
T 2gjj_A 70 DRFTGSGSGTDFTLTIGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEV 149 (264)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECCCEE
T ss_pred ccEEEecCCCEEEEEECCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCEE
Confidence 45666543 34799999999999999999998754322334567777653 221 2223346
Q ss_pred ecCCCeEEEEEEEeecCC--CeEEEEECC--E---Eec--------------cCCcEEEEe--cCceeEEEEccCCCCCC
Q psy12131 61 TAPDMRAEIICNVYANPP--AKVEWFRDG--T---AIT--------------LGGRIDMHV--SSEKHSLLVRHIKDTDF 117 (245)
Q Consensus 61 ~~~g~~~~l~C~~~~~~~--~~~~w~~~~--~---~~~--------------~~~~~~~~~--~~~~~~l~i~~~~~~d~ 117 (245)
+.+|+.+.|.|.+.+.+. +.+.|++.. . .+. ...++.+.. ......|.|.+++.+|.
T Consensus 150 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~Ds 229 (264)
T 2gjj_A 150 VKTGASVKISCKASGYSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDS 229 (264)
T ss_dssp ECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred EcCCCcEEEEEEEeCCccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccC
Confidence 889999999999998764 799999852 1 111 023444332 23467899999999999
Q ss_pred eEEEEEEEeC
Q psy12131 118 GNYMCQASNN 127 (245)
Q Consensus 118 g~y~C~~~n~ 127 (245)
|.|.|.+.|.
T Consensus 230 G~Y~C~a~n~ 239 (264)
T 2gjj_A 230 ADYYCVRSGN 239 (264)
T ss_dssp EEEEEEEECS
T ss_pred EEEEEEEecC
Confidence 9999999995
No 262
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.66 E-value=3.6e-15 Score=105.68 Aligned_cols=182 Identities=12% Similarity=-0.016 Sum_probs=109.2
Q ss_pred cceEEecCC--CeEEEEEEEeecCCCeEEEEEC---CEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCce
Q psy12131 56 KQWIHTAPD--MRAEIICNVYANPPAKVEWFRD---GTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGS 130 (245)
Q Consensus 56 ~~~~~~~~g--~~~~l~C~~~~~~~~~~~w~~~---~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~ 130 (245)
+..+.+.+| +.+.|.|.+.+ |.+.+.|++. +..+.....+.... ...|.|.++..+|.|.|.|.+.|..+.
T Consensus 14 p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~~~~~~~---~~~l~I~~v~~~D~G~Y~C~a~n~~~~ 89 (213)
T 2x1w_L 14 HGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWDS---KKGFTIPSYMISYAGMVFCEAKINDES 89 (213)
T ss_dssp CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCSSSCEEET---TTEEEEEGGGTTTCSEEEEEEC----C
T ss_pred ceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCCCcccccC---CccEEEccCChhcCceEEEEEEECCee
Confidence 356778899 99999999976 7789999874 66655544433322 236999999999999999999985443
Q ss_pred eEE-EEEEEecC-CCCcccc-C--c-cccCCCeeEEEEEeCCCC-CceEEEEEEEeecCCCCeEE-E-eeCCCCCCCcce
Q psy12131 131 SQQ-FIQLSGIP-NIPVFQK-S--S-RRLGPDGYRLVWQVDTYS-GIIQYLLKFREREELTPWRN-I-VIPSDGSLAGPI 201 (245)
Q Consensus 131 ~~~-~~~~~~~~-~~p~~~~-~--~-~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~ 201 (245)
... .+.+.+.. .+|.+.. . . ....|+.+.|.|.+.+.+ +...+ .|+++......... . ............
T Consensus 90 ~~s~~~~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i-~W~~~g~~~~~~~~~~~~~~~~~~~~~~~ 168 (213)
T 2x1w_L 90 YQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDF-NWEYPSSKHQHKKLVNRDLKTQSGSEMKK 168 (213)
T ss_dssp EECCCEEEEECBCCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEE-EEECSCSSCCSEEEEEEEECCCSSCSCEE
T ss_pred EEEEEEEEEEeCCcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEE-EEEecCCccceEEEeccccccccCcccee
Confidence 322 24444432 2222111 1 1 457899999999996543 22122 23443321111111 0 111000000012
Q ss_pred eeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceEEecCC
Q psy12131 202 YTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYVFATEG 242 (245)
Q Consensus 202 ~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~~t~~ 242 (245)
....|.|.++...+.+.|.|.|.|..|....+..+.+...+
T Consensus 169 ~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p 209 (213)
T 2x1w_L 169 FLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEDP 209 (213)
T ss_dssp EEEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC--
T ss_pred eeEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEeccc
Confidence 23579999999999999999999999987666666665443
No 263
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.65 E-value=2.2e-15 Score=93.61 Aligned_cols=94 Identities=20% Similarity=0.343 Sum_probs=77.4
Q ss_pred cCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEE-EEecCceeEEEEccCCCCCCeEEEEEEEe
Q psy12131 48 YPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRID-MHVSSEKHSLLVRHIKDTDFGNYMCQASN 126 (245)
Q Consensus 48 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 126 (245)
.+|.+...+....+..|+.+.|.|.+.|.|.|.+.|++++..+....... .........|.|.++...|.|.|.|.+.|
T Consensus 4 ~~P~~~~~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 83 (100)
T 2kdg_A 4 GPPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKN 83 (100)
T ss_dssp EEEECCCCCCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCeEEeCCCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEEc
Confidence 46677666777888999999999999999999999999998887654332 33344456899999999999999999999
Q ss_pred CCceeEEEEEEEecC
Q psy12131 127 NLGSSQQFIQLSGIP 141 (245)
Q Consensus 127 ~~g~~~~~~~~~~~~ 141 (245)
..|.....+.|.+..
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (100)
T 2kdg_A 84 RAGEATFTVQLDVLA 98 (100)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCeEEEEEEEEEEe
Confidence 999988888877653
No 264
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.65 E-value=2.8e-15 Score=91.76 Aligned_cols=89 Identities=17% Similarity=0.290 Sum_probs=74.3
Q ss_pred CCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECC--EEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEe
Q psy12131 49 PPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDG--TAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASN 126 (245)
Q Consensus 49 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~--~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 126 (245)
+|.+...+....+..|+.+.|.|.+.|.|.|.+.|++++ ..+.... .+........|.|.++..+|.|.|+|.|.|
T Consensus 2 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~--~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N 79 (93)
T 1wit_A 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPEL--LVDAKSSTTSIFFPSAKRADSGNYKLKVKN 79 (93)
T ss_dssp CCEECCCCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTTS--EEEEETTEEEEECTTBCGGGCEEEEEEEEE
T ss_pred CCeEEcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCcE--EEEecCCEEEEEECCCChhcCEEEEEEEEc
Confidence 577766677788999999999999999999999999999 7765543 223334567899999999999999999999
Q ss_pred CCceeEEEEEEEe
Q psy12131 127 NLGSSQQFIQLSG 139 (245)
Q Consensus 127 ~~g~~~~~~~~~~ 139 (245)
..|.....+.|.+
T Consensus 80 ~~G~~~~~~~l~V 92 (93)
T 1wit_A 80 ELGEDEAIFEVIV 92 (93)
T ss_dssp TTEEEEEEEEEEE
T ss_pred CCCeEEEEEEEEE
Confidence 9998888877765
No 265
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.64 E-value=4.3e-15 Score=108.12 Aligned_cols=132 Identities=13% Similarity=0.134 Sum_probs=89.2
Q ss_pred cceEEEee----cceEEEeccCCCCCEEEEEEEEcCCC---CceeeEEEEEEe----cCCeEEeecceEEecCCCeEEEE
Q psy12131 2 KEIELLYN----RESLDLDRVTLKLAGLYQCIASNNIG---ESTSKNFIVNVI----YPPEVSVEKQWIHTAPDMRAEII 70 (245)
Q Consensus 2 ~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~~~~~---~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~ 70 (245)
+|+.+..+ ..+|+|.+++.+|+|.|+|.+.+... ........|.|. .+|.+........+..|+.+.|.
T Consensus 66 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~ 145 (253)
T 3liz_H 66 GRFTISRDNAKNTLFLQMSSLKSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLG 145 (253)
T ss_dssp TTCEEEEEGGGTEEEEEECSCCGGGCEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEECC------CCEEEEE
T ss_pred CcEEEEEeCCCCEEEEEECCCChhhCEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEecCCcccCCCCcEEEE
Confidence 56666643 24499999999999999999987521 112334567776 46666544444445679999999
Q ss_pred EEEee-cCCC-eEEEEECCEEec--------cCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEe
Q psy12131 71 CNVYA-NPPA-KVEWFRDGTAIT--------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSG 139 (245)
Q Consensus 71 C~~~~-~~~~-~~~w~~~~~~~~--------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~ 139 (245)
|.+.+ .|.+ .+.|++++..+. ....+.+ .+.|.|......| |.|+|.+.|..+.......+..
T Consensus 146 C~~~g~~P~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~-----~s~L~i~~~~~~d-g~ytC~v~~~~~~~~~~~~~~~ 218 (253)
T 3liz_H 146 CLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTL-----SSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIVP 218 (253)
T ss_dssp EEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEE-----EEEEEEETTSTTT-SCCEEEEEEGGGTEEEEEECCC
T ss_pred EEEeeEeCCCeEEEEEeCCeecceEeCCccccCCeEEE-----EEEEEEcHHHCCC-ceEEEEEEECCCCcceEEEecC
Confidence 99988 6666 899999876321 1122221 2578899998888 9999999999876666555543
No 266
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.64 E-value=1.7e-13 Score=100.99 Aligned_cols=179 Identities=12% Similarity=0.102 Sum_probs=110.0
Q ss_pred CCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCE-----Eec---------cCCcEEEEecCceeEEEEccCCC
Q psy12131 49 PPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGT-----AIT---------LGGRIDMHVSSEKHSLLVRHIKD 114 (245)
Q Consensus 49 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~-----~~~---------~~~~~~~~~~~~~~~l~i~~~~~ 114 (245)
.+.+...+..+.+.+|+.+.|.|.+.+.|.+.+.|+++.. .+. ...++.+...+....|.|.+++.
T Consensus 12 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 91 (276)
T 3auv_A 12 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQP 91 (276)
T ss_dssp CCCEEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred ceeEEeCCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCCh
Confidence 3445556667888999999999999988889999998431 121 13456655555567899999999
Q ss_pred CCCeEEEEEEEeCCce-eEEEEEEEecCC-------------CCccc---cCccccCCCeeEEEEEeCCCCCceEEEEEE
Q psy12131 115 TDFGNYMCQASNNLGS-SQQFIQLSGIPN-------------IPVFQ---KSSRRLGPDGYRLVWQVDTYSGIIQYLLKF 177 (245)
Q Consensus 115 ~d~g~y~C~~~n~~g~-~~~~~~~~~~~~-------------~p~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 177 (245)
+|.|.|.|.+.|..+. ......|.+... |+... .......++.+.|.|...+.++......|+
T Consensus 92 ~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~ 171 (276)
T 3auv_A 92 EDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWV 171 (276)
T ss_dssp GGCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEEEE
T ss_pred hhCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCCCEEEEE
Confidence 9999999999997543 112223333322 11111 123456789999999996654322234466
Q ss_pred Eeec-CCCCeEEEee---------CCCCCCCc-----ceeeeEEEecCCCCCceEEEEEEEEecC
Q psy12131 178 RERE-ELTPWRNIVI---------PSDGSLAG-----PIYTQSYNITGLQLFTQYEASVLAKNRF 227 (245)
Q Consensus 178 ~~~~-~~~~~~~~~~---------~~~~~~~~-----~~~~~~~~i~~l~~~~~y~~~v~a~N~~ 227 (245)
++.. ....+..... ........ ......+.|.++...+.+.|.|.|.|..
T Consensus 172 k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~ 236 (276)
T 3auv_A 172 RQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFF 236 (276)
T ss_dssp EECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECSS
T ss_pred EcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcCc
Confidence 6532 0111100000 00000000 0112479999999999999999999984
No 267
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.64 E-value=1.9e-15 Score=119.23 Aligned_cols=153 Identities=16% Similarity=0.174 Sum_probs=90.7
Q ss_pred eEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEe-----------------cCCeE-EeecceEE-ecCCCeEEEEEE
Q psy12131 12 SLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVI-----------------YPPEV-SVEKQWIH-TAPDMRAEIICN 72 (245)
Q Consensus 12 ~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~-----------------~~p~~-~~~~~~~~-~~~g~~~~l~C~ 72 (245)
.|.|.+++.+| |.|+|.|.|..+. ......+.+. .+|.+ ...+.... +..|+.+.|.|.
T Consensus 195 ~L~i~~~~~~d-G~Y~C~a~n~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~ 272 (457)
T 1hzh_H 195 VVTVPSSSLGT-QTYICNVNHKPSN-TKVDKKAEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCV 272 (457)
T ss_dssp EEEECSGGGGT-SCCEEEEEEGGGT-EEEEEECCCCCSCSSCSCCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEE
T ss_pred EEEecccccCC-ceEEEEEEeCCCC-cceeEEecccCCCcccccCCCCCccccCCceEEeECcCchhhcccCCceEEEEE
Confidence 69999999999 9999999997655 3333333322 24554 22222222 567999999999
Q ss_pred EeecCCC----eEEEEECCEEeccCCcEEEEecCceeEEEEc---cCCCCC---CeEEEEEEEeCCceeEEEEEEEe---
Q psy12131 73 VYANPPA----KVEWFRDGTAITLGGRIDMHVSSEKHSLLVR---HIKDTD---FGNYMCQASNNLGSSQQFIQLSG--- 139 (245)
Q Consensus 73 ~~~~~~~----~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~---~~~~~d---~g~y~C~~~n~~g~~~~~~~~~~--- 139 (245)
+.|.+++ .+.|++++..+........... ....+.+. .+...| .|.|+|.|.|..+.......+..
T Consensus 273 ~~g~~p~p~~~~i~W~k~~~~~~~~~~~~~~~~-~~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~ 351 (457)
T 1hzh_H 273 VVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQ-YNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG 351 (457)
T ss_dssp EECCCTTCCCCEEEEEETTEEECCCEEEEEEEC-TTSCEEEEEEECCCHHHHHHTCCEEEEEECTTSSSCEEEEECCCCC
T ss_pred EEcccCCCCceEEEEEeCCccccccccccceec-CCCcEEEEEEEEECHHHccCCCcEEEEEeCCCCCCcceEEEEcccC
Confidence 9987653 9999999987754322111111 11122222 133445 99999999987654433333322
Q ss_pred cCCCCccccC---ccccCCCeeEEEEEeCCC
Q psy12131 140 IPNIPVFQKS---SRRLGPDGYRLVWQVDTY 167 (245)
Q Consensus 140 ~~~~p~~~~~---~~~~~~~~~~l~~~~~~~ 167 (245)
...+|.+... .....+..+.|.|.+.+.
T Consensus 352 ~~~~P~v~~~~~~~~~~~~~~~~l~C~~~g~ 382 (457)
T 1hzh_H 352 QPREPQVYTLPPSRDELTKNQVSLTCLVKGF 382 (457)
T ss_dssp CCBCCEEEEECCCGGGGGSSEEEEEEEEEEE
T ss_pred CCCCCeEEEECCCccccCCCcEEEEEEEEeE
Confidence 2233433221 111234449999999664
No 268
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.64 E-value=7.7e-15 Score=90.91 Aligned_cols=93 Identities=20% Similarity=0.260 Sum_probs=77.5
Q ss_pred cCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCC-cEEEEecCceeEEEEccCCCCCCeEEEEEEEe
Q psy12131 48 YPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGG-RIDMHVSSEKHSLLVRHIKDTDFGNYMCQASN 126 (245)
Q Consensus 48 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~-~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 126 (245)
.+|.+...+....+..|+.+.|.|.+.|.|.|.+.|++++..+.... ++.....+....|.|.++..+|.|.|.|.+.|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N 83 (99)
T 1u2h_A 4 APPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVN 83 (99)
T ss_dssp EEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCEEEEcCCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEEE
Confidence 36677777777788999999999999999999999999998876553 44444555566899999999999999999999
Q ss_pred CCceeEEEEEEEec
Q psy12131 127 NLGSSQQFIQLSGI 140 (245)
Q Consensus 127 ~~g~~~~~~~~~~~ 140 (245)
..|.....+.|.+.
T Consensus 84 ~~g~~~~~~~l~V~ 97 (99)
T 1u2h_A 84 EYGARQCEARLEVR 97 (99)
T ss_dssp TTEEEEEEEEEEEE
T ss_pred CCCceeEEEEEEEE
Confidence 99998887777654
No 269
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.64 E-value=2.7e-15 Score=106.29 Aligned_cols=174 Identities=14% Similarity=0.139 Sum_probs=102.5
Q ss_pred eEEeecceEEecCCCeEEEEEEEeecCCCeEEEEEC--CEE---ec---------cCCcEEEEecCceeEEEEccCCCCC
Q psy12131 51 EVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRD--GTA---IT---------LGGRIDMHVSSEKHSLLVRHIKDTD 116 (245)
Q Consensus 51 ~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~--~~~---~~---------~~~~~~~~~~~~~~~l~i~~~~~~d 116 (245)
.+..++ .+.+.+|+.+.|.|.+.+.+.+.+.|++. +.. +. ...++.+........|.|.+++.+|
T Consensus 3 ~v~~~~-~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 81 (213)
T 3mj8_L 3 TLTQPP-LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGD 81 (213)
T ss_dssp CBBCCS-EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eEEeCC-cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhh
Confidence 344445 67788999999999999889999999982 211 10 2235555555567789999999999
Q ss_pred CeEEEEEEEeCCc---eeEEEEEEEec--C-CCCccccC---ccccCCCeeEEEEEeCCC-CCceEEEEEEEeec-CCCC
Q psy12131 117 FGNYMCQASNNLG---SSQQFIQLSGI--P-NIPVFQKS---SRRLGPDGYRLVWQVDTY-SGIIQYLLKFRERE-ELTP 185 (245)
Q Consensus 117 ~g~y~C~~~n~~g---~~~~~~~~~~~--~-~~p~~~~~---~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~-~~~~ 185 (245)
.|.|.|.+.|..+ .....+.|.+. + .+|.+... .....++.+.|.|.+.+. ++...+ .|+++.. ....
T Consensus 82 ~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v-~W~k~g~~l~~~ 160 (213)
T 3mj8_L 82 EADYYCQSWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAV-TWEADGTPITQG 160 (213)
T ss_dssp CEEEEEEEEETTTTEEEEBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEE-EEEETTEEECTT
T ss_pred CEEEEEEeccCCcceeEEcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEE-EEEcCCcccCCC
Confidence 9999999999887 23333344433 2 34433321 223468999999999653 221222 3454432 0000
Q ss_pred eEEEe-eCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCC
Q psy12131 186 WRNIV-IPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGW 229 (245)
Q Consensus 186 ~~~~~-~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~ 229 (245)
..... ..... .......+.|......+...|+|.|.|..|.
T Consensus 161 ~~~~~~~~~~~---~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 202 (213)
T 3mj8_L 161 VKTTQPSKSDS---KYMATSYLTMTADAWKSRNTFICKVTHGGNT 202 (213)
T ss_dssp EEECCCEEETT---EEEEEEEEEEESHHHHSCSCEEEEEEETTEE
T ss_pred cccCCcCccCC---cEEEEEEEEEeHHHcCCCCEEEEEEEECCcc
Confidence 00000 00000 0001134667666544455555669998753
No 270
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.64 E-value=5.7e-15 Score=94.58 Aligned_cols=94 Identities=16% Similarity=0.309 Sum_probs=77.9
Q ss_pred cCCeEEee---cceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEE
Q psy12131 48 YPPEVSVE---KQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQA 124 (245)
Q Consensus 48 ~~p~~~~~---~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 124 (245)
.+|.+... +....+..|+.+.|.|.+.|.|.|.+.|++++..+. ..++.+........|.|.++..+|.|.|+|.+
T Consensus 20 ~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~-~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a 98 (118)
T 2e7c_A 20 EPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLD-TSRVHVRTSDFDTVFFVRQAARSDSGEYELSV 98 (118)
T ss_dssp EEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECC-CSSCEEEECSSEEEEEESSCCTTTCEEEEEEE
T ss_pred cCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECC-CCcEEEEECCCeEEEEECCCChhcCEEEEEEE
Confidence 46776542 356778899999999999999999999999999886 34555555666778999999999999999999
Q ss_pred EeCCceeEEEEEEEecCC
Q psy12131 125 SNNLGSSQQFIQLSGIPN 142 (245)
Q Consensus 125 ~n~~g~~~~~~~~~~~~~ 142 (245)
.|..|.....+.|.+...
T Consensus 99 ~N~~G~~~~~~~l~V~~~ 116 (118)
T 2e7c_A 99 QIENMKDTATIRIRVVEK 116 (118)
T ss_dssp ECSSCEECCEEEEEEECC
T ss_pred EeCCCeEEEEEEEEEEcC
Confidence 999998888888777543
No 271
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.64 E-value=8.6e-15 Score=103.64 Aligned_cols=176 Identities=14% Similarity=0.190 Sum_probs=105.6
Q ss_pred EeecceEEecCCCeEEEEEEEeecCCCeEEEEECC--EEe------------ccCCcEEEEecCceeEEEEccCCCCCCe
Q psy12131 53 SVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDG--TAI------------TLGGRIDMHVSSEKHSLLVRHIKDTDFG 118 (245)
Q Consensus 53 ~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~--~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g 118 (245)
...+..+.+.+|+.+.|.|.+.+.|.+.+.|+++. ... ....++.+...+....|.|.++..+|.|
T Consensus 5 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 84 (213)
T 3d9a_L 5 TQSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFG 84 (213)
T ss_dssp EEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred EeCCccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhCE
Confidence 34456778899999999999999888899999742 111 1124555555556679999999999999
Q ss_pred EEEEEEEeCCceeE---EEEEEEecCCCCccccC---ccccCCCeeEEEEEeCC-CCCceEEEEEEEeec-CCCC-eEEE
Q psy12131 119 NYMCQASNNLGSSQ---QFIQLSGIPNIPVFQKS---SRRLGPDGYRLVWQVDT-YSGIIQYLLKFRERE-ELTP-WRNI 189 (245)
Q Consensus 119 ~y~C~~~n~~g~~~---~~~~~~~~~~~p~~~~~---~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~-~~~~-~~~~ 189 (245)
.|.|.+.|..+... ..+.+...+.+|.+... .....+..+.|.|.+.+ .++... ..|+++.. .... ....
T Consensus 85 ~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~-v~W~k~g~~~~~~~~~~~ 163 (213)
T 3d9a_L 85 MYFCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDIN-VKWKIDGSERQNGVLNSW 163 (213)
T ss_dssp EEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCE-EEEEETTEEECTTEEEEE
T ss_pred EEEEeeecCCcceeCCCEEEEEecCCCCceeEeECCChhhcCCCcEEEEEEEeeecCCceE-EEEEcCCCcCcceeeecC
Confidence 99999999876422 13344333334443321 12345779999999965 333222 23555433 1111 1111
Q ss_pred eeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCC
Q psy12131 190 VIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWS 230 (245)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~ 230 (245)
....... ..-.....+.|..+...+...|.|.|.|.....
T Consensus 164 ~~~~~~~-~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 203 (213)
T 3d9a_L 164 TDQDSKD-STYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 203 (213)
T ss_dssp CCCCTTT-CCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred CCccCCC-CCEEEEEEEEEeccccCCCCEEEEEEEEccCCC
Confidence 1110100 000112367777777666667777799987554
No 272
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.64 E-value=3.3e-15 Score=103.41 Aligned_cols=164 Identities=11% Similarity=0.100 Sum_probs=110.1
Q ss_pred eEEecCCCeEEEEEEEeecCCCeEEEEECCEE--ecc------------CCcEEEEe---cCceeEEEEccCCCCCCeEE
Q psy12131 58 WIHTAPDMRAEIICNVYANPPAKVEWFRDGTA--ITL------------GGRIDMHV---SSEKHSLLVRHIKDTDFGNY 120 (245)
Q Consensus 58 ~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~--~~~------------~~~~~~~~---~~~~~~l~i~~~~~~d~g~y 120 (245)
.+.+.+|+.+.|.|.+.+.|.+.+.|++++.. +.. ..++.... ......|.|.++..+|.|.|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 83 (184)
T 2ny1_B 4 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 83 (184)
T ss_dssp EEEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEE
T ss_pred cEEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEE
Confidence 45678999999999999888899999998752 211 11222211 12245699999999999999
Q ss_pred EEEEEeCCceeEEEEEEEecCCCCccccCccccCCCeeEEEEEeCCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcc
Q psy12131 121 MCQASNNLGSSQQFIQLSGIPNIPVFQKSSRRLGPDGYRLVWQVDTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGP 200 (245)
Q Consensus 121 ~C~~~n~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (245)
.|.+.|..+.. .+.+...+.++ ......++.+.|.|.+.++++ ..+. |+++. .... .
T Consensus 84 ~C~~~~~~~~~--~l~V~~~~~~~----~~~v~~g~~~~l~C~~~~~p~-~~v~-W~~~~---~~~~---~--------- 140 (184)
T 2ny1_B 84 ICEVEDQKEEV--QLLVFGLTANS----DTHLLQGQSLTLTLESPPGSS-PSVQ-CRSPR---GKNI---Q--------- 140 (184)
T ss_dssp EEEETTEEEEE--EEEEEEEEESS----CSEEETTCCEEEEEECCTTCC-CEEE-EECTT---SCEE---E---------
T ss_pred EEEEEcCCCcE--EEEEEEecCCC----CceeecCCCEEEEEEcCCCCC-CEEE-EEeCC---Cccc---c---------
Confidence 99999876533 33333222122 123477889999999966533 2332 44332 1111 0
Q ss_pred eeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceEEecCCCCC
Q psy12131 201 IYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYVFATEGAET 245 (245)
Q Consensus 201 ~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~~t~~~~~ 245 (245)
....+.|.++...+.+.|+|.|.|..|....+..+.+...+.++
T Consensus 141 -~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~p~~~ 184 (184)
T 2ny1_B 141 -GGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKAS 184 (184)
T ss_dssp -ESSEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCC--
T ss_pred -CceEEEEecCCcCCCeEEEEEEEECCceEEEEEEEEEEecCCCC
Confidence 11568899999999999999999999887777778877776653
No 273
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.64 E-value=9.3e-15 Score=90.68 Aligned_cols=92 Identities=20% Similarity=0.372 Sum_probs=77.7
Q ss_pred CCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEec--cCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEe
Q psy12131 49 PPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAIT--LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASN 126 (245)
Q Consensus 49 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~--~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 126 (245)
+|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++++..+. ...++.+...+....|.|.++..+|.|.|.|.+.|
T Consensus 5 pP~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 84 (100)
T 3irg_A 5 PPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGN 84 (100)
T ss_dssp EEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCeeecCCCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEEEEEe
Confidence 4566666677788999999999999999999999999998876 34466676666678999999999999999999999
Q ss_pred CCceeEEEEEEEec
Q psy12131 127 NLGSSQQFIQLSGI 140 (245)
Q Consensus 127 ~~g~~~~~~~~~~~ 140 (245)
..|.....+.|.+.
T Consensus 85 ~~g~~~~~~~l~V~ 98 (100)
T 3irg_A 85 EFGSDSATVNIHIR 98 (100)
T ss_dssp TTEEEEEEEEEEEE
T ss_pred CCCcEEEEEEEEEE
Confidence 99988887777653
No 274
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.64 E-value=8.1e-16 Score=108.26 Aligned_cols=121 Identities=16% Similarity=0.249 Sum_probs=82.9
Q ss_pred ecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEec-------------------------------CCeEEeecc
Q psy12131 9 NRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIY-------------------------------PPEVSVEKQ 57 (245)
Q Consensus 9 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~-------------------------------~p~~~~~~~ 57 (245)
.+.+|.|.+++.+|+|.|+|.+.+.. +..+.|.+.. +|.+...+.
T Consensus 47 ~~~~L~i~~v~~~DsG~Y~C~~~~~~----s~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 122 (204)
T 1sy6_A 47 DKKKWNLGSNAKDPRGMYQCKGSQNK----SKPLQVYYRMGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPY 122 (204)
T ss_dssp SCCCEEEEEGGGCCEEEEEEESSSSC----CCCEEEEEEC------------------------------------CCCC
T ss_pred CCCeEEeCCCCcCCCEEEEEEecCCC----CeeEEEEEEEeccccccccccccccccccccccccccccccccceecCCc
Confidence 34569999999999999999975532 2334455440 122221222
Q ss_pred eEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCC--cEEEEecCceeEEEEccC-CCCCCeEEEEEEEeCCcee-EE
Q psy12131 58 WIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGG--RIDMHVSSEKHSLLVRHI-KDTDFGNYMCQASNNLGSS-QQ 133 (245)
Q Consensus 58 ~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~-~~~d~g~y~C~~~n~~g~~-~~ 133 (245)
....+|+.+.|.|. +.|.|.+.|++++..+.... ...... ...|.|.++ ..+|.|.|+|.|.|..|.. ..
T Consensus 123 -~v~~~G~~v~L~C~--g~p~p~i~W~k~~~~l~~~~~~~~~~~~---~~~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~ 196 (204)
T 1sy6_A 123 -KVSISGTTVILTCP--QYPGSEILWQHNDKNIGGDEDDKNIGSD---EDHLSLKEFSELEQSGYYVCYPRGSKPEDANF 196 (204)
T ss_dssp -EEEEETTEEEEECS--CCCSSCEEEEETTEEESCCTTCTTEEEE---TTEEEETTCCHHHHCEEEEEEETTSCGGGSSC
T ss_pred -eeeecCCcEEEEcC--CCCCCceEEEECCEECCCccCCceEecC---CCEEEEeeCCccccCEEEEEEeccCCCCceeE
Confidence 22238999999999 78889999999998876432 111111 347999999 9999999999999999863 44
Q ss_pred EEEEEe
Q psy12131 134 FIQLSG 139 (245)
Q Consensus 134 ~~~~~~ 139 (245)
.+.|.+
T Consensus 197 ~l~l~~ 202 (204)
T 1sy6_A 197 YLYLRA 202 (204)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 555543
No 275
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.64 E-value=4.3e-14 Score=102.15 Aligned_cols=176 Identities=14% Similarity=0.101 Sum_probs=106.8
Q ss_pred EEeecceEEecCCCeEEEEEEEeecCCCeEEEEECC--E---Eec---------cCCcEEEEecCceeEEEEccCCCCCC
Q psy12131 52 VSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDG--T---AIT---------LGGRIDMHVSSEKHSLLVRHIKDTDF 117 (245)
Q Consensus 52 ~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~--~---~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~ 117 (245)
+...+..+.+.+|+.+.|.|.+.+.+.+.+.|++.. . .+. ...++.+...+....|.|.++..+|.
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 83 (242)
T 2znx_A 4 LTQSPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDF 83 (242)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEEcCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHHC
Confidence 445566778899999999999998888999999842 1 111 13456555455567899999999999
Q ss_pred eEEEEEEEeCCcee-EEEEEEEecCCC------------Ccc-c--cCccccCCCeeEEEEEeCCCCCceEEEEEEEeec
Q psy12131 118 GNYMCQASNNLGSS-QQFIQLSGIPNI------------PVF-Q--KSSRRLGPDGYRLVWQVDTYSGIIQYLLKFRERE 181 (245)
Q Consensus 118 g~y~C~~~n~~g~~-~~~~~~~~~~~~------------p~~-~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 181 (245)
|.|.|.+.|..+.. .....|.+...+ +.. . .......++.+.|.|.+.+.+....+..|++...
T Consensus 84 G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~ 163 (242)
T 2znx_A 84 GMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGDSITSDYXSXIRKFP 163 (242)
T ss_dssp EEEEEEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEESSCGGGSCEEEEEECT
T ss_pred EEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEccccCCcceeeEeeCC
Confidence 99999999975421 112233332211 111 1 1123577899999999965532112344666532
Q ss_pred -CCCCeEEEeeCCC--------CCCCc-----ceeeeEEEecCCCCCceEEEEEEEEecC
Q psy12131 182 -ELTPWRNIVIPSD--------GSLAG-----PIYTQSYNITGLQLFTQYEASVLAKNRF 227 (245)
Q Consensus 182 -~~~~~~~~~~~~~--------~~~~~-----~~~~~~~~i~~l~~~~~y~~~v~a~N~~ 227 (245)
....+........ ..... ......+.|.++...+.+.|.|.|.|..
T Consensus 164 ~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~ 223 (242)
T 2znx_A 164 GNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXDGD 223 (242)
T ss_dssp TSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTSS
T ss_pred CCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccCCc
Confidence 1111100000000 00000 0112579999999999999999999953
No 276
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.64 E-value=1.3e-14 Score=102.62 Aligned_cols=174 Identities=12% Similarity=0.146 Sum_probs=102.2
Q ss_pred cceEEecCCCeEEEEEEEeecCCCeEEEEEC--CEEe------------ccCCcEEEEecCceeEEEEccCCCCCCeEEE
Q psy12131 56 KQWIHTAPDMRAEIICNVYANPPAKVEWFRD--GTAI------------TLGGRIDMHVSSEKHSLLVRHIKDTDFGNYM 121 (245)
Q Consensus 56 ~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~--~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~ 121 (245)
+....+.+|+.+.|.|.+.+.+.+.+.|+++ +..+ ....++.+...+....|.|.++..+|.|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 86 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYF 86 (210)
T ss_dssp CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEEE
Confidence 5567789999999999999988889999983 2211 1124555554555678999999999999999
Q ss_pred EEEEeCCceeE---EEEEEEecCCCCccccC---ccccCCCeeEEEEEeCCCCCceEEEEEEEeec-CCCC-eEEEeeCC
Q psy12131 122 CQASNNLGSSQ---QFIQLSGIPNIPVFQKS---SRRLGPDGYRLVWQVDTYSGIIQYLLKFRERE-ELTP-WRNIVIPS 193 (245)
Q Consensus 122 C~~~n~~g~~~---~~~~~~~~~~~p~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~ 193 (245)
|.+.|..+... ..+.+...+.+|.+... .....+..+.|.|.+.+..|...-..|+++.. .... ........
T Consensus 87 C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~ 166 (210)
T 1lk3_L 87 CQQSWNGPLTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQD 166 (210)
T ss_dssp EEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEECCCC
T ss_pred EEEEcCCCceeCCCEEEEEcCCCcCCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccCCcc
Confidence 99999775322 13333333334443321 12346789999999965322211223555433 1111 11111110
Q ss_pred CCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCC
Q psy12131 194 DGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWS 230 (245)
Q Consensus 194 ~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~ 230 (245)
... ........+.|..+...+...|.|.|.|.....
T Consensus 167 ~~~-~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 202 (210)
T 1lk3_L 167 SKD-STYSMSSTLSLTKADYESHNLYTCEVVHKTSSS 202 (210)
T ss_dssp TTT-CCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred CCC-CCEEEEEEEEEChHHhccCCcEEEEEEecCCCC
Confidence 000 000112356777666555566666699986543
No 277
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.63 E-value=2.5e-14 Score=107.93 Aligned_cols=175 Identities=14% Similarity=0.134 Sum_probs=105.5
Q ss_pred EEeecceEEecCCCeEEEEEEEeec-CCCeEEEEECCEEec----c-----CCcEEEEec-----CceeEEEEccCCCCC
Q psy12131 52 VSVEKQWIHTAPDMRAEIICNVYAN-PPAKVEWFRDGTAIT----L-----GGRIDMHVS-----SEKHSLLVRHIKDTD 116 (245)
Q Consensus 52 ~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~~~w~~~~~~~~----~-----~~~~~~~~~-----~~~~~l~i~~~~~~d 116 (245)
+...+..+.+.+|+.+.|.|.+.+. |.+.+.|++++.... . ..++..... .....|.|.++..+|
T Consensus 6 v~~~p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D 85 (327)
T 2wng_A 6 VIQPDKSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPAD 85 (327)
T ss_dssp EECCCSEEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGGG
T ss_pred EEcCCCceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCcccc
Confidence 4445667888999999999999987 888999999864311 0 113332111 345689999999999
Q ss_pred CeEEEEEEEeCCcee-------EEEEEEEecCCCCccccC-ccccCCCeeEEEEEeCCCCCc-eEEEEEEEeec-CCCCe
Q psy12131 117 FGNYMCQASNNLGSS-------QQFIQLSGIPNIPVFQKS-SRRLGPDGYRLVWQVDTYSGI-IQYLLKFRERE-ELTPW 186 (245)
Q Consensus 117 ~g~y~C~~~n~~g~~-------~~~~~~~~~~~~p~~~~~-~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~-~~~~~ 186 (245)
.|.|.|.+.|..+.. ...+.+...|.+|.+... .....++.+.|.|.+.+.+|. ..+ .|+++.. .....
T Consensus 86 ~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~~~~~~~~g~~~~l~C~~~g~p~~~~~v-~W~k~g~~l~~~~ 164 (327)
T 2wng_A 86 AGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITL-KWFKNGNELSDFQ 164 (327)
T ss_dssp CEEEEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEECCSSCBCTTCEEEEEEEEEEEBSSCCEE-EEEETTEECCCEE
T ss_pred CeEEEEEeecCCCcceeEeecCcEEEEEEecCCCceeeccccccCCCCEEEEEEEEeCccCCCcEE-EEEECCEEccccc
Confidence 999999999986531 124555556666554422 345678899999999655432 122 2455433 11111
Q ss_pred EEEeeCCCCCCCccee-eeEEEecCCCCCceEEEEEEEEecCCCC
Q psy12131 187 RNIVIPSDGSLAGPIY-TQSYNITGLQLFTQYEASVLAKNRFGWS 230 (245)
Q Consensus 187 ~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~y~~~v~a~N~~G~~ 230 (245)
......... .... ...+.|......+...|+|.|.|..|.+
T Consensus 165 ~~~~~~~~~---~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~ 206 (327)
T 2wng_A 165 TNVDPVGES---VSYSIHSTAKVVLTREDVHSQVICEVAHVTLQG 206 (327)
T ss_dssp EEEECSSCC---SCEEEEEEEEEECCTTGGGCEEEEEEECTTSCS
T ss_pred cccccccCC---CceEEEEEEEEechhcCcCceEEEEEeccccCC
Confidence 111111110 1111 1234454444444466677799998874
No 278
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.63 E-value=5.6e-15 Score=99.21 Aligned_cols=104 Identities=18% Similarity=0.234 Sum_probs=85.1
Q ss_pred eEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEec-CceeEEEEccCCCCCCe
Q psy12131 40 KNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVS-SEKHSLLVRHIKDTDFG 118 (245)
Q Consensus 40 ~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~g 118 (245)
....+.+..+|.+...+....+..|+.+.|.|.+.|.|.|.+.|++++..+....++.+... .....|.|.++...|.|
T Consensus 32 ~~~~~~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 111 (154)
T 1fhg_A 32 EVAEEKPHVKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDA 111 (154)
T ss_dssp --CCCCCCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCE
T ss_pred ehhcccCCCCCeEEccCCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCE
Confidence 33445556788888887788899999999999999999999999999999887777766543 34578999999999999
Q ss_pred EEEEEEEeCCceeEEEEEEEecCCC
Q psy12131 119 NYMCQASNNLGSSQQFIQLSGIPNI 143 (245)
Q Consensus 119 ~y~C~~~n~~g~~~~~~~~~~~~~~ 143 (245)
.|+|.+.|..|.....+.|.+...|
T Consensus 112 ~Y~C~a~N~~G~~~~~~~l~V~~~p 136 (154)
T 1fhg_A 112 KYTCKAVNSLGEATCTAELLVETMG 136 (154)
T ss_dssp EEEEEEEETTEEEEEEEEEEEECC-
T ss_pred EEEEEEEECCCeEEEEEEEEEeCcC
Confidence 9999999999998887777765433
No 279
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.63 E-value=1.1e-14 Score=101.76 Aligned_cols=124 Identities=15% Similarity=0.148 Sum_probs=89.0
Q ss_pred ceEEEeecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeec-CC---
Q psy12131 3 EIELLYNRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYAN-PP--- 78 (245)
Q Consensus 3 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~~--- 78 (245)
++.+..++..|.|.+++.+|+|.|.|.|.+..+. ..+.+.|.|..+|........ ....|+.+ |.|.+.+. |.
T Consensus 51 ~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~-~~~~~~ltV~~~P~~~~i~~~-~~~~g~~~-l~C~a~g~~P~~~~ 127 (210)
T 1gsm_A 51 AVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRT-FQHTVQLLVYAFPNQLTVSPA-ALVPGDPE-VACTAHKVTPVDPN 127 (210)
T ss_dssp CEEEESSEEEEEECSCCGGGCEEEEEEEEETTEE-EEEEEEEEEEBCCSEEEEESS-SBCTTCCE-EEEEEEEEBCCCTT
T ss_pred cEEecCCccEEEECccCcccCceEEEEEEeCCCc-eEEEEEEEEEecCCCcEEccc-eEEeCCce-EEEEeCCCCCCCCC
Confidence 4555556677999999999999999999998766 678899999999976553322 45567778 99999885 63
Q ss_pred -CeEEEEECCEEeccCCcEE--E-E----e-cCc------eeEEEEccCCCCCCeEEEEEEEeCCc
Q psy12131 79 -AKVEWFRDGTAITLGGRID--M-H----V-SSE------KHSLLVRHIKDTDFGNYMCQASNNLG 129 (245)
Q Consensus 79 -~~~~w~~~~~~~~~~~~~~--~-~----~-~~~------~~~l~i~~~~~~d~g~y~C~~~n~~g 129 (245)
+.+.|++++..+....... + . . ... .+++.+.....++.+.|+|.|.+.+-
T Consensus 128 ~lti~Wlk~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vts~~~~~~~~~D~~~~~tC~a~~~L~ 193 (210)
T 1gsm_A 128 ALSFSLLVGGQELEGAQALGPEVQEEEEEPQGDEDVLFRVTERWRLPPLGTPVPPALYCQATMRLP 193 (210)
T ss_dssp TEEEEEEETTEECTTCEECCCEEEECTTCCSSCCCCCEEEEEEEECCCCCSSCCSEEEEEEEEEET
T ss_pred CcEEEEEECCEEcccccccccceecccccccCCcceEEEEEEEEeecCCcccCCceEEEEEEeeCC
Confidence 4899999999885432101 1 0 0 001 23444446666667899999998763
No 280
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.63 E-value=1.4e-15 Score=95.49 Aligned_cols=93 Identities=17% Similarity=0.334 Sum_probs=81.7
Q ss_pred cCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeC
Q psy12131 48 YPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNN 127 (245)
Q Consensus 48 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 127 (245)
.+|.+...+....+..|+.+.|.|.+.|.|.|.+.|++++..+....++.+........|.|.++...|.|.|.|.+.|.
T Consensus 13 ~~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 92 (106)
T 1nct_A 13 LAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVENS 92 (106)
T ss_dssp CCCEEEECCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEECCBCS
T ss_pred CCCEEEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCEEEEEECcCCchhCEEEEEEEEeC
Confidence 35677777778889999999999999999999999999998888777877776666789999999999999999999999
Q ss_pred CceeEEEEEEEec
Q psy12131 128 LGSSQQFIQLSGI 140 (245)
Q Consensus 128 ~g~~~~~~~~~~~ 140 (245)
.|.....+.|.+.
T Consensus 93 ~G~~~~~~~l~V~ 105 (106)
T 1nct_A 93 EGKQEAEFTLTIQ 105 (106)
T ss_dssp SCBCCEEEEEEEC
T ss_pred CCeEEEEEEEEEE
Confidence 9998888877764
No 281
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.63 E-value=4.2e-15 Score=102.11 Aligned_cols=152 Identities=13% Similarity=0.153 Sum_probs=94.2
Q ss_pred eEEecCCCeEEEEEEEee--cCCCeEEEEECCEEec----------cCCcEEEEecCceeEEEEccCCCCCCeEEEEEEE
Q psy12131 58 WIHTAPDMRAEIICNVYA--NPPAKVEWFRDGTAIT----------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQAS 125 (245)
Q Consensus 58 ~~~~~~g~~~~l~C~~~~--~~~~~~~w~~~~~~~~----------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 125 (245)
.+.+.+|+.+.|.|...+ .+.+.+.|++++..+. ...++.+.. ...|.|.++..+|.|.|.|.+.
T Consensus 5 ~v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~---~gsL~I~~v~~~D~G~Y~C~~~ 81 (176)
T 1hng_A 5 TVWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILA---NGDLKIKNLTRDDSGTYNVTVY 81 (176)
T ss_dssp EEEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECT---TSCEEESSCCGGGCEEEEEEEE
T ss_pred EEEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECC---CCcEEEcccccccCEEEEEEEE
Confidence 355779999999995433 4556899999986542 233444422 2359999999999999999999
Q ss_pred eCCcee--EEEEEEEecCC--CCccccCccccCCCeeEEEEEeCCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcce
Q psy12131 126 NNLGSS--QQFIQLSGIPN--IPVFQKSSRRLGPDGYRLVWQVDTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPI 201 (245)
Q Consensus 126 n~~g~~--~~~~~~~~~~~--~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (245)
|..|.. ...+.|.+... .|.+. ..+..+.|.|.+.+.+++ .+ .|+++.. .+.....
T Consensus 82 n~~g~~~~~~~~~l~V~~~~~~p~i~-----~~~~~v~L~C~~~g~p~p-~i-~W~~~g~------~l~~~~~------- 141 (176)
T 1hng_A 82 STNGTRILNKALDLRILEMVSKPMIY-----WECSNATLTCEVLEGTDV-EL-KLYQGKE------HLRSLRQ------- 141 (176)
T ss_dssp ETTCCEEEEEEEEEEEECCCCCCEEE-----EETTTTEEEEECSSCSSC-EE-EEEETTE------EEEEESS-------
T ss_pred eCCCCEEEEEEEEEEEeCCCCCCEEE-----ecCCcEEEEEEecCCCCc-EE-EEEECCE------ECCCCCc-------
Confidence 998875 55566665432 23222 223458999999776552 33 2444322 1111111
Q ss_pred eeeEEEecCCCCCceEEEEEEEEecCCCCCCCcce
Q psy12131 202 YTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAY 236 (245)
Q Consensus 202 ~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~ 236 (245)
..+.... ..+.+.|+|.|.|.+|....+..+
T Consensus 142 --~~i~~~~--~~d~G~Y~C~a~N~~g~~~~~~~l 172 (176)
T 1hng_A 142 --KTMSYQW--TNLRAPFKCKAVNRVSQESEMEVV 172 (176)
T ss_dssp --SEEEEEC--SCCSSCEEEEEEETTEEEEEEECC
T ss_pred --EEEEEEE--ccCCeEEEEEEEecCCCceecccc
Confidence 2222223 444455555599999976655444
No 282
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.63 E-value=2.1e-14 Score=101.63 Aligned_cols=131 Identities=15% Similarity=0.217 Sum_probs=85.0
Q ss_pred CeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECC---EE--e---------ccCCcEEEEecCceeEEEEccCCCC
Q psy12131 50 PEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDG---TA--I---------TLGGRIDMHVSSEKHSLLVRHIKDT 115 (245)
Q Consensus 50 p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~---~~--~---------~~~~~~~~~~~~~~~~l~i~~~~~~ 115 (245)
|.+...+..+.+.+|+.+.|.|.+.+.+.+.+.|++.. .. + ....++.+........|.|.++..+
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (213)
T 3r06_A 2 IQMTQSPSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESE 81 (213)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred CeeEeCCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcc
Confidence 34555566788899999999999999888999999822 11 1 1134565555556779999999999
Q ss_pred CCeEEEEEEEeCCce-eE--EEEEEEecCCCCccccC---ccccCCCeeEEEEEeCCCCCceEEEEEEEee
Q psy12131 116 DFGNYMCQASNNLGS-SQ--QFIQLSGIPNIPVFQKS---SRRLGPDGYRLVWQVDTYSGIIQYLLKFRER 180 (245)
Q Consensus 116 d~g~y~C~~~n~~g~-~~--~~~~~~~~~~~p~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 180 (245)
|.|.|.|.+.|..+. .. ..+.+...+.+|.+... .....+..+.|.|.+.+..|......|+++.
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g 152 (213)
T 3r06_A 82 DIGSYYCQQYYNYPWTFGPGTKLEIKRADAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDG 152 (213)
T ss_dssp GCSEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETT
T ss_pred cCEEEEEecccCCceEEcCCceEEEeccCCCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEECC
Confidence 999999999987542 12 23333222344443321 2234567899999996543321223355543
No 283
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.63 E-value=8.5e-14 Score=101.42 Aligned_cols=175 Identities=9% Similarity=0.053 Sum_probs=106.9
Q ss_pred eEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECC--E---Ee----------ccCCcEEE--EecCceeEEEEccCC
Q psy12131 51 EVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDG--T---AI----------TLGGRIDM--HVSSEKHSLLVRHIK 113 (245)
Q Consensus 51 ~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~--~---~~----------~~~~~~~~--~~~~~~~~l~i~~~~ 113 (245)
.+...+..+.+.+|+.+.|.|.+.+.+.+.+.|++.. . .+ ....++.+ ........|.|.+++
T Consensus 5 ~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~ 84 (256)
T 3tf7_C 5 SVTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVH 84 (256)
T ss_dssp EEECSCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCC
T ss_pred EEEecCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCC
Confidence 3444556778889999999999999999999999821 1 11 11234443 223456689999999
Q ss_pred CCCCeEEEEEEEeCCce----eEEEEEEEecC-------------------CCCccccC---ccccCCCeeEEEEEeCCC
Q psy12131 114 DTDFGNYMCQASNNLGS----SQQFIQLSGIP-------------------NIPVFQKS---SRRLGPDGYRLVWQVDTY 167 (245)
Q Consensus 114 ~~d~g~y~C~~~n~~g~----~~~~~~~~~~~-------------------~~p~~~~~---~~~~~~~~~~l~~~~~~~ 167 (245)
.+|.|.|.|.+.|..+. ......|.+.+ .+|.+... .....++.++|.|.+.+.
T Consensus 85 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~ 164 (256)
T 3tf7_C 85 RSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGENVTLSCRQTNS 164 (256)
T ss_dssp GGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEETTCCEEECEEECSC
T ss_pred cccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCcEEEEEEcCCC
Confidence 99999999999987542 11122333332 22322221 233578999999999665
Q ss_pred CCceEEEEEEEeec-CCCCeEEEeeCCCCC-------CC----cceeeeEEEecCCCCCceEEEEEEEEecCC
Q psy12131 168 SGIIQYLLKFRERE-ELTPWRNIVIPSDGS-------LA----GPIYTQSYNITGLQLFTQYEASVLAKNRFG 228 (245)
Q Consensus 168 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-------~~----~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G 228 (245)
.+ ...||+... ....+.......... .. .......|.|.++...+...|.|.|.|..|
T Consensus 165 ~~---~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g 234 (256)
T 3tf7_C 165 HN---YMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAPG 234 (256)
T ss_dssp CS---EEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEETT
T ss_pred ce---EEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCCC
Confidence 44 234555432 111111110000000 00 011235799999999999999999999876
No 284
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.62 E-value=1.2e-14 Score=101.98 Aligned_cols=180 Identities=13% Similarity=0.105 Sum_probs=109.0
Q ss_pred cCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcE-EEEecCceeEEEEccCCCCCCeEEEEEEEe
Q psy12131 48 YPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRI-DMHVSSEKHSLLVRHIKDTDFGNYMCQASN 126 (245)
Q Consensus 48 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~-~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 126 (245)
.+|.+...+. ..+.+|++++|.|.+. .+.+.+.|++++..+...... ..........|.|.++..+|.|.|.|.+.+
T Consensus 7 ~~P~i~~~p~-~~v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~~ 84 (201)
T 1nkr_A 7 RKPSLLAHPG-PLVKSEETVILQCWSD-VMFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSV 84 (201)
T ss_dssp CCCEEEEESC-SEEETTCCEEEEEEES-SCCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEEB
T ss_pred CCCeEEEEcC-CccCCCCcEEEEEecc-CCCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEec
Confidence 4677766665 5578999999999997 467899999988654321110 011122356899999999999999999986
Q ss_pred CC-----ceeE--EEEEEEecCCCCccccC--ccccCCCeeEEEEEeCCCCCceEEEEEEEeecCCCCeEEEeeCCCCCC
Q psy12131 127 NL-----GSSQ--QFIQLSGIPNIPVFQKS--SRRLGPDGYRLVWQVDTYSGIIQYLLKFREREELTPWRNIVIPSDGSL 197 (245)
Q Consensus 127 ~~-----g~~~--~~~~~~~~~~~p~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (245)
.. .... ..+.+...+.+|.+... ..+..|+.++|.|.+.+..+ .|. |+++...............
T Consensus 85 ~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~~~v~~G~~v~L~C~~~~~~~--~~~-w~k~g~~~~~~~~~~~~~~--- 158 (201)
T 1nkr_A 85 THSPYQVSAPSDPLDIVIIGLYEKPSLSAQPGPTVLAGENVTLSCSSRSSYD--MYH-LSREGEAHERRLPAGPKVN--- 158 (201)
T ss_dssp TTBTTCCCCCCCCEEEEEECSSCCCEEEEESCSEECTTCEEEEEEEESSCCS--EEE-EEETTCSSCEEEECEEEET---
T ss_pred CCCCccccCCCCCEEEEeeccCCCCceecCCCCccCCCCeEEEEEeCCCCCc--eEE-EEECCcccCcccccccccC---
Confidence 42 1122 24444443344443322 24578899999999976433 333 5665431111110000000
Q ss_pred CcceeeeEEEecCCCCCceEEEEEEEEecC---CCCCCCcceEEe
Q psy12131 198 AGPIYTQSYNITGLQLFTQYEASVLAKNRF---GWSRPSKAYVFA 239 (245)
Q Consensus 198 ~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~---G~~~~s~~~~~~ 239 (245)
......|.|.++. +.+.|+|.|.|.. ..+..|+.+.+.
T Consensus 159 --~~~~~~L~i~~v~--d~G~Y~C~a~~~~~~~~~s~~S~~~~l~ 199 (201)
T 1nkr_A 159 --GTFQADFPLGPAT--HGGTYRCFGSFHDSPYEWSKSSDPLLVS 199 (201)
T ss_dssp --TEEEEEEEEEECC--SCEEEEEEEEETTEEEEECCCCCCEEEE
T ss_pred --CceEEEEEeCCcC--CCeeEEEEEEcCCCCCcCCCCCCCEEEE
Confidence 0112567787887 6666777788653 456778777654
No 285
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.62 E-value=3e-16 Score=112.78 Aligned_cols=120 Identities=17% Similarity=0.226 Sum_probs=71.7
Q ss_pred cceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEec---CCeEEeecceEEecCCCeEEEEEEEeecCC-C-eEEEE
Q psy12131 10 RESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIY---PPEVSVEKQWIHTAPDMRAEIICNVYANPP-A-KVEWF 84 (245)
Q Consensus 10 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~-~~~w~ 84 (245)
..+|.|.+++.+|+|.|+|.+.+..+........|.|.. +|.+...+.......|+.+.|.|.+.+.++ + .+.|+
T Consensus 92 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~ 171 (233)
T 3bqu_C 92 DFVFTIENMLSEDVADYYCLQSDNLPYTFGGGTNLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWK 171 (233)
T ss_dssp EEEEC-----CCCCSEEEEEECSSSSCCBCCCCBC---CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEE
T ss_pred EEEEEECCCCHHHCEEEEEEEecCCceeecCCEEEEEeCCCCCCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEEE
Confidence 346999999999999999999987653222333456654 666665443333346899999999998544 3 79999
Q ss_pred ECCEEeccCCcEE--EEecC-----ceeEEEEccCCCCCCeEEEEEEEeCCc
Q psy12131 85 RDGTAITLGGRID--MHVSS-----EKHSLLVRHIKDTDFGNYMCQASNNLG 129 (245)
Q Consensus 85 ~~~~~~~~~~~~~--~~~~~-----~~~~l~i~~~~~~d~g~y~C~~~n~~g 129 (245)
+++..+....... ..... ..+.|.|.....+|.|.|+|.+.|...
T Consensus 172 k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 223 (233)
T 3bqu_C 172 IDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 223 (233)
T ss_dssp EC-----CCEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC--
T ss_pred ECCeeCCCCceEecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCC
Confidence 9998765431111 00011 124688888888899999999999753
No 286
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.62 E-value=2.4e-15 Score=106.75 Aligned_cols=134 Identities=13% Similarity=0.116 Sum_probs=81.3
Q ss_pred cceEEEeec--ceEEEeccCCCCCEEEEEEEEcCCCC---ceeeEEEEEEe----cCCeEEeecceEEecCCCeEEEEEE
Q psy12131 2 KEIELLYNR--ESLDLDRVTLKLAGLYQCIASNNIGE---STSKNFIVNVI----YPPEVSVEKQWIHTAPDMRAEIICN 72 (245)
Q Consensus 2 ~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~~~~~~~~---~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~ 72 (245)
+|+.+...+ .+|.|.+++.+|+|.|+|.+.+..+. .......|.|. .+|.+...+....+..|+.+.|.|.
T Consensus 64 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~ 143 (215)
T 3nl4_H 64 GRFTISKTSTTVDLKITSPTTEDTATYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGCL 143 (215)
T ss_dssp TTEEEEECSSEEEEEESSCCGGGCEEEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCCTTCCC--CEEEEEE
T ss_pred CCEEEEeeCCEEEEEECCCCcccCEEEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCCccccCCCcEEEEEE
Confidence 456665432 35999999999999999999987542 12334567776 4566654433334567999999999
Q ss_pred EeecCCC--eEEEEECCEEeccCCcEEEEecCceeEEEE---ccCCCCCCeEEEEEEEeCCceeEEEEEEE
Q psy12131 73 VYANPPA--KVEWFRDGTAITLGGRIDMHVSSEKHSLLV---RHIKDTDFGNYMCQASNNLGSSQQFIQLS 138 (245)
Q Consensus 73 ~~~~~~~--~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i---~~~~~~d~g~y~C~~~n~~g~~~~~~~~~ 138 (245)
+.+.+++ .+.|++++..+...........+. .+.+ ..+...| |.|+|.+.|..+.......+.
T Consensus 144 ~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g--~~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~~~~l~ 211 (215)
T 3nl4_H 144 VKGYLPEPVTVTWNSGTLTNGVRTFPSVRQSSG--LYSLSSVVSVTSSS-QPVTCNVAHPATNTKVDKTVA 211 (215)
T ss_dssp EEEEBSSCCEEEEGGGTBCTTEEECCCEECTTS--CEEEEEEEEECC----CCEEEEEEGGGTEEEEEECC
T ss_pred EeeeeCCCeEEEEeeCCEECCeEecCceECCCC--CEEEEEEEEEeccC-CEEEEEEEeCCCCcceEEecC
Confidence 9886443 688999886432211111111111 1222 3355556 999999999987665555443
No 287
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.62 E-value=7.6e-15 Score=107.16 Aligned_cols=119 Identities=12% Similarity=0.186 Sum_probs=86.3
Q ss_pred ecceEEEeccCCCCCEEEEEEEEcCCCC--ceeeEEEEEEec-----------------CCeEEeecceEEecCCCeEEE
Q psy12131 9 NRESLDLDRVTLKLAGLYQCIASNNIGE--STSKNFIVNVIY-----------------PPEVSVEKQWIHTAPDMRAEI 69 (245)
Q Consensus 9 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~~~l~v~~-----------------~p~~~~~~~~~~~~~g~~~~l 69 (245)
+..+|.|.+++.+|+|.|+|.+.+..+. .......|.|.. +|.+...+....+.+|+.+.|
T Consensus 77 ~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L 156 (259)
T 3omz_A 77 KNLRMILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTL 156 (259)
T ss_dssp CCCEEEESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEE
T ss_pred CeEEEEECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEE
Confidence 3456999999999999999999987652 134456677765 345666667778899999999
Q ss_pred EEEEeec-CCCeEEEEECC--EEec------------cCCcEEEE--ecCceeEEEEccCCCCCCeEEEEEEEeC
Q psy12131 70 ICNVYAN-PPAKVEWFRDG--TAIT------------LGGRIDMH--VSSEKHSLLVRHIKDTDFGNYMCQASNN 127 (245)
Q Consensus 70 ~C~~~~~-~~~~~~w~~~~--~~~~------------~~~~~~~~--~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 127 (245)
.|.+.+. +.+.+.|++.. .... ...++.+. .......|.|.+++.+|.|.|.|.+.+.
T Consensus 157 ~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 231 (259)
T 3omz_A 157 NCLYETSWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCALGES 231 (259)
T ss_dssp CCEEECCCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEEEESC
T ss_pred EEECCCccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEEEeCc
Confidence 9998874 77899999832 1110 01334333 1223457999999999999999999853
No 288
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.62 E-value=2.9e-14 Score=87.95 Aligned_cols=88 Identities=16% Similarity=0.296 Sum_probs=76.4
Q ss_pred EeecceEEecCCCeEEEEEEEeec-CCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCcee
Q psy12131 53 SVEKQWIHTAPDMRAEIICNVYAN-PPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSS 131 (245)
Q Consensus 53 ~~~~~~~~~~~g~~~~l~C~~~~~-~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~ 131 (245)
...+....+.+|+.+.|.|.+.+. |.|.+.|++++..+....++.+...+....|.|.++..+|.|.|.|.+.|..|..
T Consensus 5 ~~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~ 84 (97)
T 2bk8_A 5 SGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGED 84 (97)
T ss_dssp ECCCCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEE
T ss_pred eccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCCeE
Confidence 334556778999999999999997 8899999999999888778777666667799999999999999999999999998
Q ss_pred EEEEEEEec
Q psy12131 132 QQFIQLSGI 140 (245)
Q Consensus 132 ~~~~~~~~~ 140 (245)
...+.|.+.
T Consensus 85 ~~~~~l~V~ 93 (97)
T 2bk8_A 85 SSYAELFVK 93 (97)
T ss_dssp EEEEEEEET
T ss_pred eEEEEEEEE
Confidence 888877765
No 289
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.62 E-value=8.2e-14 Score=101.11 Aligned_cols=174 Identities=15% Similarity=0.178 Sum_probs=105.7
Q ss_pred EEeecceEEecCCCeEEEEEEEeecCCCeEEEEECC-----EEe---------ccCCcEEEEecCceeEEEEccCCCCCC
Q psy12131 52 VSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDG-----TAI---------TLGGRIDMHVSSEKHSLLVRHIKDTDF 117 (245)
Q Consensus 52 ~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~-----~~~---------~~~~~~~~~~~~~~~~l~i~~~~~~d~ 117 (245)
+...+..+.+.+|+.+.|.|.+.+.+.+.+.|++.. ..+ ....++..........|.|.+++.+|.
T Consensus 7 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 86 (250)
T 3esu_F 7 LIQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQEDI 86 (250)
T ss_dssp EECSCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEecCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChhhC
Confidence 344556677889999999999999999999999842 111 112455555555567899999999999
Q ss_pred eEEEEEEEeCCceeE-EEEEEEecCC------------------CCcc-c--cCccccCCCeeEEEEEeCCCCCceEEEE
Q psy12131 118 GNYMCQASNNLGSSQ-QFIQLSGIPN------------------IPVF-Q--KSSRRLGPDGYRLVWQVDTYSGIIQYLL 175 (245)
Q Consensus 118 g~y~C~~~n~~g~~~-~~~~~~~~~~------------------~p~~-~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 175 (245)
|.|.|.+.|..+... ....+.+... ++.. . .......++.+.|.|.+.+.++......
T Consensus 87 G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~ 166 (250)
T 3esu_F 87 GTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKDSGYAFSSSWMN 166 (250)
T ss_dssp EEEEEEECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEECCSTTGGGSEEE
T ss_pred EEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEecCCcccCCEEE
Confidence 999999998754321 1122333221 1111 1 1123567899999999966432223445
Q ss_pred EEEeec-CCCCeEEEeeCCC---------CCCC-----cceeeeEEEecCCCCCceEEEEEEEEe
Q psy12131 176 KFRERE-ELTPWRNIVIPSD---------GSLA-----GPIYTQSYNITGLQLFTQYEASVLAKN 225 (245)
Q Consensus 176 ~~~~~~-~~~~~~~~~~~~~---------~~~~-----~~~~~~~~~i~~l~~~~~y~~~v~a~N 225 (245)
|+++.. ....+........ .... .......+.|.++...+.+.|.|.|.|
T Consensus 167 W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 167 WVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp EEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred EEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 666532 1111211100000 0000 001124699999999999999999998
No 290
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.62 E-value=6e-15 Score=91.39 Aligned_cols=88 Identities=10% Similarity=0.172 Sum_probs=73.8
Q ss_pred CCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCC
Q psy12131 49 PPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNL 128 (245)
Q Consensus 49 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 128 (245)
+|.+...+....+.+|+.+.|.|.+ .|.|.+.|++++..+....++.+...+....|.|.++..+|.|.|+|.|.|..
T Consensus 7 p~~~~~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~ 84 (100)
T 2yuz_A 7 GLKILTPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDAYN 84 (100)
T ss_dssp CCCCSBCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESSSC
T ss_pred CCEEeccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcCCC
Confidence 5666667777889999999999999 78899999999999988888888877777899999999999999999999983
Q ss_pred ceeEEEEEEE
Q psy12131 129 GSSQQFIQLS 138 (245)
Q Consensus 129 g~~~~~~~~~ 138 (245)
......+.+.
T Consensus 85 ~~~~a~L~V~ 94 (100)
T 2yuz_A 85 VTLPAKVHVI 94 (100)
T ss_dssp CCEEEEEEEE
T ss_pred eeEEEEEEEe
Confidence 3344444444
No 291
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.62 E-value=3.1e-14 Score=100.79 Aligned_cols=117 Identities=12% Similarity=0.202 Sum_probs=82.3
Q ss_pred CeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECC--E---Eec---------cCCcEEEEecCceeEEEEccCCCC
Q psy12131 50 PEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDG--T---AIT---------LGGRIDMHVSSEKHSLLVRHIKDT 115 (245)
Q Consensus 50 p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~--~---~~~---------~~~~~~~~~~~~~~~l~i~~~~~~ 115 (245)
|.+...+..+.+.+|+.+.|.|.+.+.|.+.+.|++.. . .+. ...++.+...+....|.|.+++.+
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (213)
T 3nl4_L 2 VVMTQTPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECA 81 (213)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGG
T ss_pred ccEEeCCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChH
Confidence 34555566788899999999999999888999999832 1 111 134666655556778999999999
Q ss_pred CCeEEEEEEEeCCce---eE--EEEEEEecCCCCccccC---ccccCCCeeEEEEEeCC
Q psy12131 116 DFGNYMCQASNNLGS---SQ--QFIQLSGIPNIPVFQKS---SRRLGPDGYRLVWQVDT 166 (245)
Q Consensus 116 d~g~y~C~~~n~~g~---~~--~~~~~~~~~~~p~~~~~---~~~~~~~~~~l~~~~~~ 166 (245)
|.|.|.|.+.|..+. .. ..+.+...+.+|.+... .....++.+.|.|.+.+
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g 140 (213)
T 3nl4_L 82 DAATYYCQSTYENPTYVSFGGGTEVGVKGDPVAPTVLIFPPSADLVATGTVTIVCVANK 140 (213)
T ss_dssp GCEEEEEEECCSSTTTCEECCCEEEEEECCCBCCEEEEECCCHHHHTTSEEEEEEEEEE
T ss_pred HCEEEEEecCCCCceeEEeCCCeEEEEeCCCcCCeEEEeCCchhhccCCcEeEEEEEec
Confidence 999999999997652 22 23444433444544321 22346889999999966
No 292
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.62 E-value=3.5e-14 Score=103.24 Aligned_cols=183 Identities=14% Similarity=0.127 Sum_probs=109.1
Q ss_pred cCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcE-EEEecCceeEEEEccCCCCCCeEEEEEEEe
Q psy12131 48 YPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRI-DMHVSSEKHSLLVRHIKDTDFGNYMCQASN 126 (245)
Q Consensus 48 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~-~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 126 (245)
.+|.+...+. ..+.+|++++|.|.+.+ +.+.+.|++++..+...... ..........|.|.++..+|.|.|+|.+.+
T Consensus 6 ~kP~i~~~P~-~~V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~ 83 (257)
T 1b6u_A 6 RKPSLLAHPG-PLVKSEETVILQCWSDV-RFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSV 83 (257)
T ss_dssp CCCEECCBSC-SEEESSCCEEEEEEESS-CCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEEC
T ss_pred CCCEEEEcCC-CEecCCCCEEEEEecCC-CCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEec
Confidence 4677766665 55789999999999874 56799999987643211000 000112356899999999999999999986
Q ss_pred CCc-----eeE--EEEEEEecCCCCccccC--ccccCCCeeEEEEEeCCCCCceEEEEEEEeecCCCCeEEEeeCCCCCC
Q psy12131 127 NLG-----SSQ--QFIQLSGIPNIPVFQKS--SRRLGPDGYRLVWQVDTYSGIIQYLLKFREREELTPWRNIVIPSDGSL 197 (245)
Q Consensus 127 ~~g-----~~~--~~~~~~~~~~~p~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (245)
..+ ... ..+.+...+.+|.+... ..+..++.++|.|.+.+..+ .|. |+++...............
T Consensus 84 ~~~~~~~s~~S~~~~L~V~~~~~~P~l~~~p~~~V~~G~~vtL~C~~~~~~~--~~~-w~k~g~~~~~~~~~~~~~~--- 157 (257)
T 1b6u_A 84 THSPYQLSAPSDPLDIVITGLYEKPSLSAQPGPTVLAGESVTLSCSSRSSYD--MYH-LSREGEAHERRFSAGPKVN--- 157 (257)
T ss_dssp SSCTTSCCCCCCCEEEEEECSSCCCEEECSSCTTCBTTCEEEEEEECSSCCS--EEE-EEETTSSCEECCBCBCCSS---
T ss_pred cCCCccccccCCCEEEecccCCCCcceEccCCCccCCCCEEEEEEeCCCCCc--EEE-EEECCcccCcccccccccC---
Confidence 421 122 24444443344443322 24578899999999976543 343 5665431000000000000
Q ss_pred CcceeeeEEEecCCCCCceEEEEEEEEecC---CCCCCCcceEEecCC
Q psy12131 198 AGPIYTQSYNITGLQLFTQYEASVLAKNRF---GWSRPSKAYVFATEG 242 (245)
Q Consensus 198 ~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~---G~~~~s~~~~~~t~~ 242 (245)
......|.|.++. +.+.|+|.|.|.. ..+..|..+.+...+
T Consensus 158 --~~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g 201 (257)
T 1b6u_A 158 --GTFQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTG 201 (257)
T ss_dssp --SCCBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCBC
T ss_pred --CceeEEEEecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEec
Confidence 0112567888887 6677777799764 356677776665443
No 293
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.61 E-value=1.8e-14 Score=91.92 Aligned_cols=96 Identities=21% Similarity=0.335 Sum_probs=79.9
Q ss_pred cCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEecc-CCcEEEEecC-ceeEEEEccCCCCCCeEEEEEEE
Q psy12131 48 YPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITL-GGRIDMHVSS-EKHSLLVRHIKDTDFGNYMCQAS 125 (245)
Q Consensus 48 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~-~~~~~~~~~~-~~~~l~i~~~~~~d~g~y~C~~~ 125 (245)
.+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|++++..+.. ..++.+...+ ....|.|.++..+|.|.|.|.+.
T Consensus 14 ~~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 93 (116)
T 2kkq_A 14 RAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSAV 93 (116)
T ss_dssp BCCCBSSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEEEEE
T ss_pred CCCeEEeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEEEEE
Confidence 578888888888899999999999999999999999999988774 3556555443 34589999999999999999999
Q ss_pred eCCceeEEEEEEEecCCC
Q psy12131 126 NNLGSSQQFIQLSGIPNI 143 (245)
Q Consensus 126 n~~g~~~~~~~~~~~~~~ 143 (245)
|..|.....+.|.+...|
T Consensus 94 N~~G~~~~~~~l~V~~~p 111 (116)
T 2kkq_A 94 NEAGVTTCNTRLDVTARP 111 (116)
T ss_dssp ETTEEEEEEEEEEEECCS
T ss_pred cCCCeEEEEEEEEEeCCC
Confidence 999998887777765433
No 294
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.61 E-value=1.2e-14 Score=109.19 Aligned_cols=174 Identities=10% Similarity=0.028 Sum_probs=108.6
Q ss_pred EEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEE
Q psy12131 42 FIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYM 121 (245)
Q Consensus 42 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~ 121 (245)
+...+..+|.+...+. ..+.+|+.+.|.|.+.+. .+.+.|++++..+..... .......|.|.++..+|.|.|.
T Consensus 17 ~~~~~~~~P~i~~~p~-~~v~~G~~v~L~C~~~~~-~~~~~W~k~g~~~~~~~~----~~~~~~~L~I~~v~~~D~G~Y~ 90 (316)
T 3vh8_G 17 SHMGGQDKPFLSAWPS-AVVPRGGHVTLRCHYRHR-FNNFMLYKEDRIHIPIFH----GRIFQESFNMSPVTTAHAGNYT 90 (316)
T ss_dssp -------CCEEEEESC-SEEETTSCEEEEEEBTTB-CCSEEEEESSCSSSCHHH----HCCBSSCEEECSCCGGGCEEEE
T ss_pred cccCCCCCCEeeccCC-CccCCCCCEEEEEEccCC-CceEEEEeCCCccceeec----CCcceEEEEECCCCcccCeEEE
Confidence 4445557888888876 457799999999999877 689999999876432110 1123457999999999999999
Q ss_pred EEEEeCC-----ceeEE--EEEEEecCCCCccccC--ccccCCCeeEEEEEeCCCCCceEEEEEEEeecCCCCeEEEeeC
Q psy12131 122 CQASNNL-----GSSQQ--FIQLSGIPNIPVFQKS--SRRLGPDGYRLVWQVDTYSGIIQYLLKFREREELTPWRNIVIP 192 (245)
Q Consensus 122 C~~~n~~-----g~~~~--~~~~~~~~~~p~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (245)
|.+.|.. +.... .+.+...+.+|.+... ..+..++.+.|.|.+.+.++ .| .||++.. ..........
T Consensus 91 C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~~--~~-~w~k~g~-~~~~~~~~~~ 166 (316)
T 3vh8_G 91 CRGSHPHSPTGWSAPSNPVVIMVTGNHRKPSLLAHPGPLVKSGERVILQCWSDIMFE--HF-FLHKEGI-SKDPSRLVGQ 166 (316)
T ss_dssp EEEBCSSSSSSBCCCCCCEEEEEECSSCCCEEEEESCSEEETTCCEEEEEEESSCCS--EE-EEEETTC-CSCCEEEECE
T ss_pred EEEEcCCCCcceecCCCcEEEEEecCCCCCeEEecCCCccCCCCeEEEEEcCCCCCc--EE-EEEECCC-ccccceeeee
Confidence 9998632 22223 3344333334443322 22567899999999955433 33 3555543 1111110000
Q ss_pred CCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCC
Q psy12131 193 SDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGW 229 (245)
Q Consensus 193 ~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~ 229 (245)
. ........|.|.++...+.+.|+|.|.|..|.
T Consensus 167 ~----~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 199 (316)
T 3vh8_G 167 I----HDGVSKANFSIGPMMLALAGTYRCYGSVTHTP 199 (316)
T ss_dssp E----ETTEEEEEEEECSCCGGGCEEEEEEEECTTCT
T ss_pred e----cCCCceEEEEECCCChhhCceEEEEEecCCCC
Confidence 0 00112367899999999999999999999885
No 295
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.61 E-value=6.3e-15 Score=92.74 Aligned_cols=94 Identities=21% Similarity=0.381 Sum_probs=73.4
Q ss_pred cCCCCccccCccccCCCeeEEEEEe--CCCCCceEEEEEEEeecCCCCe-EEEeeCCCCCCCcceeeeEEEecCCCCCce
Q psy12131 140 IPNIPVFQKSSRRLGPDGYRLVWQV--DTYSGIIQYLLKFREREELTPW-RNIVIPSDGSLAGPIYTQSYNITGLQLFTQ 216 (245)
Q Consensus 140 ~~~~p~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~ 216 (245)
.|.+|.+.... ...+++.|.|.+ +++.|+.+|.++|+... ...| ....++... ..+.+.+|.+++.
T Consensus 8 ~P~pP~~~~~~--~~~~sv~L~W~p~~dggsPI~~Y~I~yr~~~-~~~w~~~~~~~~~~--------~~~~l~~L~p~t~ 76 (114)
T 2kbg_A 8 EPSPPSIHGQP--SSGKSFKLSITKQDDGGAPILEYIVKYRSKD-KEDQWLEKKVQGNK--------DHIILEHLQWTMG 76 (114)
T ss_dssp CCCSCCEECCB--CSTTCEEEEECCCCCSSSCCSEEEEEEEESS-CCSCCEEEEEETTT--------CCEEECCCCTTCC
T ss_pred CccCCcccccc--cCCCEEEEEEECCCCCCCcccEEEEEEEeCC-CCCcEEeEEcCCCc--------CEEEEcCCCCCCE
Confidence 56677665443 678899999998 46789999999999975 3444 433333332 5789999999999
Q ss_pred EEEEEEEEecCCCCCCCcceEEecCCCCC
Q psy12131 217 YEASVLAKNRFGWSRPSKAYVFATEGAET 245 (245)
Q Consensus 217 y~~~v~a~N~~G~~~~s~~~~~~t~~~~~ 245 (245)
|.|||.|.|..|.|.+|. +.+.|..++|
T Consensus 77 Y~frV~A~N~~G~s~pS~-~~~~T~~~~~ 104 (114)
T 2kbg_A 77 YEVQITAANRLGYSEPTV-YEFSMPPKPN 104 (114)
T ss_dssp EEEEEEEECTTSCEEEEE-EEECCCCCCS
T ss_pred EEEEEEEEeCCcCcCCcC-CEEEcCCCCc
Confidence 999999999999999886 6788877654
No 296
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.61 E-value=4.3e-14 Score=101.68 Aligned_cols=178 Identities=11% Similarity=0.134 Sum_probs=104.5
Q ss_pred CeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECC--EE---e---------ccCCcEEEEecCceeEEEEccCCCC
Q psy12131 50 PEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDG--TA---I---------TLGGRIDMHVSSEKHSLLVRHIKDT 115 (245)
Q Consensus 50 p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~--~~---~---------~~~~~~~~~~~~~~~~l~i~~~~~~ 115 (245)
+.+...+..+.+.+|+.+.|.|.+.+.+.+.+.|++.. .. + ....++..........|.|.+++.+
T Consensus 25 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 104 (237)
T 3sob_L 25 IQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPE 104 (237)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred ceEEeCCCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCChh
Confidence 44555566778899999999999998888899999832 10 0 1134565555556778999999999
Q ss_pred CCeEEEEEEEeCCce---eEEEEEEEecCCCCccccC---ccccCCCeeEEEEEeCCCCC-ceEEEEEEEeec-CCCCe-
Q psy12131 116 DFGNYMCQASNNLGS---SQQFIQLSGIPNIPVFQKS---SRRLGPDGYRLVWQVDTYSG-IIQYLLKFRERE-ELTPW- 186 (245)
Q Consensus 116 d~g~y~C~~~n~~g~---~~~~~~~~~~~~~p~~~~~---~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~-~~~~~- 186 (245)
|.|.|.|.+.+..+. ....+.+...+.+|.+... .....+..+.|.|.+.+..| ...+ .|+++.. .....
T Consensus 105 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v-~W~k~g~~~~~~~~ 183 (237)
T 3sob_L 105 DFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKV-QWKVDNALQSGNSQ 183 (237)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEEECCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEE-EEEETTEECCSSEE
T ss_pred hCeEEEEeeccCCceEEcCcEEEEEecCCCCCceEEeCCChhhccCCceEEEEEEcccCCCceEE-EEEECCCCCCCcee
Confidence 999999999887642 2224444444455544322 11234678999999965333 2223 3555433 11110
Q ss_pred EEEeeCCCCCCCccee-eeEEEecCCCCCceEEEEEEEEecCCCC
Q psy12131 187 RNIVIPSDGSLAGPIY-TQSYNITGLQLFTQYEASVLAKNRFGWS 230 (245)
Q Consensus 187 ~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~y~~~v~a~N~~G~~ 230 (245)
......... ..... ...+.+......+...|+|.|.|.....
T Consensus 184 ~~~~~~~~~--~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 226 (237)
T 3sob_L 184 ESVTEQDSK--DSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSS 226 (237)
T ss_dssp EEECCCCTT--TCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSS
T ss_pred ecccccccC--CCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCC
Confidence 111111100 11111 2335555554444555566699987554
No 297
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.61 E-value=1.6e-14 Score=102.86 Aligned_cols=176 Identities=14% Similarity=0.024 Sum_probs=100.7
Q ss_pred cceEEecCCCeEEEEEEEeecCC-----CeEEEEECCEEecc---------------CCcEEEEe---cCceeEEEEccC
Q psy12131 56 KQWIHTAPDMRAEIICNVYANPP-----AKVEWFRDGTAITL---------------GGRIDMHV---SSEKHSLLVRHI 112 (245)
Q Consensus 56 ~~~~~~~~g~~~~l~C~~~~~~~-----~~~~w~~~~~~~~~---------------~~~~~~~~---~~~~~~l~i~~~ 112 (245)
+..+.+..|+.+.|.|.+.+.|. +.+.|++++..+.. ..+..+.. ......|.|.++
T Consensus 8 ~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v 87 (222)
T 3sbw_C 8 KDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDV 87 (222)
T ss_dssp CSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSC
T ss_pred CccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCc
Confidence 44567889999999999977663 38999997533211 12222211 123468999999
Q ss_pred CCCCCeEEEEEEEeCCceeEEEEEEEecCC--CCccccCccccCCCeeEEEEEeCCCCCceEEEEEEEeec--CCCCeEE
Q psy12131 113 KDTDFGNYMCQASNNLGSSQQFIQLSGIPN--IPVFQKSSRRLGPDGYRLVWQVDTYSGIIQYLLKFRERE--ELTPWRN 188 (245)
Q Consensus 113 ~~~d~g~y~C~~~n~~g~~~~~~~~~~~~~--~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 188 (245)
..+|.|.|.|.+.| .+.....+.|.+... .+..........++.+.|.|.+.+.++. . ..|+++.+ .......
T Consensus 88 ~~~D~G~Y~C~~~~-~~~~~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~L~C~~~g~P~p-~-i~W~~~~g~~~~~~~~~ 164 (222)
T 3sbw_C 88 KLQDAGVYRCMISY-GGADYKRITVKVNAPYNKINQRILVVDPVTSEHELTCQAEGYPKA-E-VIWTSSDHQVLSGKTTT 164 (222)
T ss_dssp CGGGCEEEEEEEES-SSEEEEEEEEEEEBCCCCCEEEEEEEETTTTEEEEEEEEEEBSCC-E-EEEEETTCCEECCEEEE
T ss_pred ccccCeEEEEEEEe-CCCceeEEEEEEECCCCCCCceeeeeecCCCcEEEEEEecCCCCC-e-EEEEECCCceecCccce
Confidence 99999999999999 555555666655422 2222221234678899999999664432 2 23444422 0111111
Q ss_pred -EeeCCCCCCCccee-eeEEEecCCCCCceEEEEEEEEecCCCCCCCcceEEecC
Q psy12131 189 -IVIPSDGSLAGPIY-TQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYVFATE 241 (245)
Q Consensus 189 -~~~~~~~~~~~~~~-~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~~t~ 241 (245)
....... ... ...+.+ ...+...|+|.|.|..|....+..+.+...
T Consensus 165 ~~~~~~~~----~~~~~~~l~v---~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~ 212 (222)
T 3sbw_C 165 TNSKREEK----LFNVTSTLRI---NTTTNEIFYCTFRRLDPEENHTAELVIPEL 212 (222)
T ss_dssp EECC--------CEEEEEEEEE---ECCTTCEEEEEEEETTTTEEEEEEEECCCC
T ss_pred EEEcCCCC----CEEEEEEEEE---eccCCcEEEEEEEeCccceeeEEEEEecCC
Confidence 1111111 011 111222 233344556669999998776666666533
No 298
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.61 E-value=4.5e-14 Score=99.99 Aligned_cols=170 Identities=12% Similarity=0.136 Sum_probs=100.8
Q ss_pred cceEEecCCCeEEEEEEEeec-------CCCeEEEEECCEE------e-----------ccCCcEEEEec--CceeEEEE
Q psy12131 56 KQWIHTAPDMRAEIICNVYAN-------PPAKVEWFRDGTA------I-----------TLGGRIDMHVS--SEKHSLLV 109 (245)
Q Consensus 56 ~~~~~~~~g~~~~l~C~~~~~-------~~~~~~w~~~~~~------~-----------~~~~~~~~~~~--~~~~~l~i 109 (245)
+..+.+.+|+.+.|.|.+.+. +.+.+.|++++.. + ....++.+... .....|.|
T Consensus 7 p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I 86 (214)
T 2zg1_A 7 QKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLSI 86 (214)
T ss_dssp CSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEEE
T ss_pred CcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEEE
Confidence 456778899999999998754 4678999997642 1 01234444321 23457999
Q ss_pred ccCCCCCCeEEEEEEEeCCcee------EEEEEEEecCCCCccccCccccCCCeeEEEEEeCCC---CCceEEEEEEEee
Q psy12131 110 RHIKDTDFGNYMCQASNNLGSS------QQFIQLSGIPNIPVFQKSSRRLGPDGYRLVWQVDTY---SGIIQYLLKFRER 180 (245)
Q Consensus 110 ~~~~~~d~g~y~C~~~n~~g~~------~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~ 180 (245)
.+++.+|.|.|.|.+.+..+.. ...+.+...+.+|.+........++.+.|.|.+.+. .|...+ .|+++.
T Consensus 87 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~G~~v~L~C~~~~~~~~~p~p~v-~W~~~~ 165 (214)
T 2zg1_A 87 GDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHFLEPLESGRPTRLSCSLPGSCEAGPPLTF-SWTGNA 165 (214)
T ss_dssp CSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC--CCCCTTCCEEEEEECTTCCSCSSCCEE-EEESST
T ss_pred ccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceecCccccCCCeEEEEEEeccCCCCCCCceE-EEeCCC
Confidence 9999999999999999876321 233444444445554433335678899999999653 132233 244443
Q ss_pred cCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceEE
Q psy12131 181 EELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYVF 238 (245)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~ 238 (245)
. ... ... ......+.|......+...|+|.|.|..|....+..+.+
T Consensus 166 ~-~~~-------~~~----~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v~l 211 (214)
T 2zg1_A 166 L-SPL-------DPE----TTRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTVQL 211 (214)
T ss_dssp T-SSS-------CSS----CCCSSEEEECCCTTCCSCEEEEEEECC----CCEEEEEC
T ss_pred C-ccC-------CCC----ceeEEEEEEecccHHcCcEEEEEEEeCCCCcceEEEEEE
Confidence 2 100 000 011245677777666666677779998766555544443
No 299
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.61 E-value=2.7e-15 Score=94.57 Aligned_cols=100 Identities=22% Similarity=0.354 Sum_probs=69.2
Q ss_pred EEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEE
Q psy12131 42 FIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYM 121 (245)
Q Consensus 42 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~ 121 (245)
+.|.+..+|.+...+....+..|+.+.|.|.+.|.|.+.+.|++++..+.......+.. ....|.|.++..+|.|.|.
T Consensus 3 ~~v~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~--~~~~L~i~~v~~~D~G~Y~ 80 (108)
T 3kvq_A 3 LTVLERVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKD--GNRNLTIRRVRKEDEGLYT 80 (108)
T ss_dssp --------CCCBSCCCCEEEETTCCEEEECBCC----CCEEEEESSSBCCCBTTEEEET--TTTEEEECSCCGGGCEEEE
T ss_pred eeECccCCCceecCCCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCCCeEEeC--CCcEEEEeecCcccCEEEE
Confidence 45677788998888888889999999999999999999999999998877655554432 3457999999999999999
Q ss_pred EEEEeCCceeEEEEEEEecCCC
Q psy12131 122 CQASNNLGSSQQFIQLSGIPNI 143 (245)
Q Consensus 122 C~~~n~~g~~~~~~~~~~~~~~ 143 (245)
|.+.|..|.....+.+.+...+
T Consensus 81 C~a~n~~g~~~~~~~l~V~~~~ 102 (108)
T 3kvq_A 81 CQACSVLGCAKVEAFFIIEGAQ 102 (108)
T ss_dssp EEEC----CEEEEEEEEEEC--
T ss_pred EEEEeCCCceEEEEEEEEeCCC
Confidence 9999999988887777765433
No 300
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.61 E-value=7e-15 Score=107.90 Aligned_cols=129 Identities=19% Similarity=0.212 Sum_probs=86.6
Q ss_pred cceEEEee---cceEEEeccCCCCCEEEEEEEEcCC-CCceeeEEEEEEec------CCeEEee-cceEEecCCCeEEEE
Q psy12131 2 KEIELLYN---RESLDLDRVTLKLAGLYQCIASNNI-GESTSKNFIVNVIY------PPEVSVE-KQWIHTAPDMRAEII 70 (245)
Q Consensus 2 ~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~~~~~~-~~~~~~~~~l~v~~------~p~~~~~-~~~~~~~~g~~~~l~ 70 (245)
+|+.+..+ ..+|.|.+++.+|+|.|+|.+.+.. .........|.|.. +|.+... +....+..|+.+.|.
T Consensus 88 ~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~ 167 (268)
T 3pl6_D 88 DRFFAVRPEGSVSTLKIQRTERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLV 167 (268)
T ss_dssp TTEEEECTTSSSEEEEECSCCGGGCEEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEE
T ss_pred CcEEEEecCCCEEEEEECCCCcccCEEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEE
Confidence 67777652 4569999999999999999999742 11134455677765 5554433 223334568999999
Q ss_pred EEEeecCCC--eEEEEECCEEeccCCcEEE---E-----ecC---ceeEEEEccCCCCC-CeEEEEEEEeCCce
Q psy12131 71 CNVYANPPA--KVEWFRDGTAITLGGRIDM---H-----VSS---EKHSLLVRHIKDTD-FGNYMCQASNNLGS 130 (245)
Q Consensus 71 C~~~~~~~~--~~~w~~~~~~~~~~~~~~~---~-----~~~---~~~~l~i~~~~~~d-~g~y~C~~~n~~g~ 130 (245)
|.+.+.+++ .+.|++++..+........ . ..+ ..+.|.|......| .|.|+|.+.|....
T Consensus 168 C~~~g~~p~~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~l~ 241 (268)
T 3pl6_D 168 CLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 241 (268)
T ss_dssp EEEEEEBSSCEEEEEEESSSEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred EEECcccCCCeEEEEEECCEECCCCeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcCCCC
Confidence 999986554 8999999988754311100 0 000 02456777776666 99999999997543
No 301
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.60 E-value=1.5e-14 Score=102.61 Aligned_cols=132 Identities=12% Similarity=0.102 Sum_probs=83.9
Q ss_pred cceEEEee----cceEEEeccCCCCCEEEEEEEEcCCCC--ceeeEEEEEEec----CCeEEeecceEEecCCCeEEEEE
Q psy12131 2 KEIELLYN----RESLDLDRVTLKLAGLYQCIASNNIGE--STSKNFIVNVIY----PPEVSVEKQWIHTAPDMRAEIIC 71 (245)
Q Consensus 2 ~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C 71 (245)
+|+.+..+ ..+|.|.+++.+|+|.|+|.+.+..+. .....+.|.|.. +|.+...+....+..|+.+.|.|
T Consensus 65 ~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C 144 (215)
T 1c5d_H 65 SRLSINRDTSKSQVFLKMNSLQTEDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPGCGDTTSSTVTLGC 144 (215)
T ss_dssp GGEEEEEETTTTEEEEEESSCCGGGCEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECCCSSCCCCSSEEEEE
T ss_pred CcEEEEeeCCCceEEEEECCCCcccCEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEeccCChhhccCCcEEEEE
Confidence 46676642 247999999999999999999986422 122346777763 45555433223356799999999
Q ss_pred EEeec-CCC-eEEEEECCEEeccCCcEEEEecCceeE--EEEccCCCCCCeEEEEEEEeCCceeEEEE
Q psy12131 72 NVYAN-PPA-KVEWFRDGTAITLGGRIDMHVSSEKHS--LLVRHIKDTDFGNYMCQASNNLGSSQQFI 135 (245)
Q Consensus 72 ~~~~~-~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~--l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 135 (245)
.+.+. |.| .+.|++++..+........... .... ..+......+ |.|+|.+.|..+......
T Consensus 145 ~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~~~-g~~~~~s~L~~~~~~~-g~ytC~v~n~~~~~~~~~ 210 (215)
T 1c5d_H 145 LVKGYFPEPVTVTWNSGALSSDVHTFPAVLQS-GLYTLTSSVTSSTWPS-QTVTCNVAHPASSTKVDK 210 (215)
T ss_dssp EEEEEBSSCCEEEEGGGTTCCSCCBCCCEEET-TEEEEEEEEEESSTTT-SCCEEEEEEGGGTEEEEE
T ss_pred EEeeeEcCCcEEEEccCCccCceEecCcccCC-CCEEEEEEEecccCCC-CeEEEEEEeCCCCccEEE
Confidence 99986 777 9999998764321111111111 1111 1123333345 999999999887655433
No 302
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.60 E-value=1.7e-13 Score=98.74 Aligned_cols=175 Identities=12% Similarity=0.084 Sum_probs=106.4
Q ss_pred EEeecceEEecCCCeEEEEEEEeecC----CCeEEEEECC--E---Eec---------cCCcEEEEecCceeEEEEccCC
Q psy12131 52 VSVEKQWIHTAPDMRAEIICNVYANP----PAKVEWFRDG--T---AIT---------LGGRIDMHVSSEKHSLLVRHIK 113 (245)
Q Consensus 52 ~~~~~~~~~~~~g~~~~l~C~~~~~~----~~~~~w~~~~--~---~~~---------~~~~~~~~~~~~~~~l~i~~~~ 113 (245)
+...+..+.+.+|+.+.|.|.+.+.+ .+.+.|+++. . .+. ...++.+...+....|.|.++.
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 83 (240)
T 1moe_A 4 LTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVE 83 (240)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred eEeeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCC
Confidence 34456667889999999999999887 6789999842 1 111 1245655555556789999999
Q ss_pred CCCCeEEEEEEEeCCce-eEEEEEEEecCC-----CCccc---cCccccCCCeeEEEEEeCCCCCceEEEEEEEeec-CC
Q psy12131 114 DTDFGNYMCQASNNLGS-SQQFIQLSGIPN-----IPVFQ---KSSRRLGPDGYRLVWQVDTYSGIIQYLLKFRERE-EL 183 (245)
Q Consensus 114 ~~d~g~y~C~~~n~~g~-~~~~~~~~~~~~-----~p~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~ 183 (245)
.+|.|.|.|.+.|..+. ......|.+... ++... .......++.+.|.|.+.+.++......|+++.. ..
T Consensus 84 ~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~ 163 (240)
T 1moe_A 84 ADDVATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQG 163 (240)
T ss_dssp GGGCEEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSC
T ss_pred hhhCEEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEECCCCC
Confidence 99999999999998553 222233333322 22211 1123567899999999976542212344566531 11
Q ss_pred CCeEEEee-----------CCCCCC-C--cceeeeEEEecCCCCCceEEEEEEEEec
Q psy12131 184 TPWRNIVI-----------PSDGSL-A--GPIYTQSYNITGLQLFTQYEASVLAKNR 226 (245)
Q Consensus 184 ~~~~~~~~-----------~~~~~~-~--~~~~~~~~~i~~l~~~~~y~~~v~a~N~ 226 (245)
..+..... ...... . .......+.|.++...+.+.|.|.|.+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 220 (240)
T 1moe_A 164 LEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFGY 220 (240)
T ss_dssp CEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECST
T ss_pred cEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEec
Confidence 11110000 000000 0 0011256999999999999999999854
No 303
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.60 E-value=1.8e-14 Score=105.25 Aligned_cols=128 Identities=13% Similarity=0.121 Sum_probs=85.3
Q ss_pred cceEEEee----cceEEEeccCCCCCEEEEEEEEcCCCCc--eeeEEEEEEec----CCeEEeecceEEecCCCeEEEEE
Q psy12131 2 KEIELLYN----RESLDLDRVTLKLAGLYQCIASNNIGES--TSKNFIVNVIY----PPEVSVEKQWIHTAPDMRAEIIC 71 (245)
Q Consensus 2 ~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C 71 (245)
+|+.+..+ ..+|.|.+++.+|+|.|+|.+.+..+.. ....+.|.|.. +|.+...+....+..|+.+.|.|
T Consensus 72 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~v~~g~~v~L~C 151 (261)
T 2xqy_G 72 DKVTLTVDKSSSTVYIQLSSLTSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGC 151 (261)
T ss_dssp TTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCCC--CCSEEEEEE
T ss_pred CcEEEEecCCCCEEEEEEcCCCcccCeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCCCccccCCCcEEEEE
Confidence 46777643 3579999999999999999999864311 12345777764 45554433223356799999999
Q ss_pred EEeec-CCC-eEEEEECCEEeccCCcEEEEecC---ceeEEEEccCCCCCCeEEEEEEEeCCce
Q psy12131 72 NVYAN-PPA-KVEWFRDGTAITLGGRIDMHVSS---EKHSLLVRHIKDTDFGNYMCQASNNLGS 130 (245)
Q Consensus 72 ~~~~~-~~~-~~~w~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~ 130 (245)
.+.+. |.+ .+.|++++..+.......+...+ ..+.|.|.....+| |.|+|.+.|....
T Consensus 152 ~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~~ 214 (261)
T 2xqy_G 152 LVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASS 214 (261)
T ss_dssp EEEEEBSSCCEEEEGGGTCCTTEEECCCEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGT
T ss_pred EEEeEeCCCCEEEEecCCCcCceEecCceecCCcEEEEEEEEEeccccCC-CEEEEEEEECCCC
Confidence 99875 666 99999987654211000011111 13578898888777 9999999997654
No 304
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.60 E-value=1.4e-14 Score=106.21 Aligned_cols=185 Identities=13% Similarity=0.046 Sum_probs=111.0
Q ss_pred CeEEeecceEEecCCCeEEEEEEEe---ecCCCeEEEEECCEEecc------------------CCcEEEEe--cCceeE
Q psy12131 50 PEVSVEKQWIHTAPDMRAEIICNVY---ANPPAKVEWFRDGTAITL------------------GGRIDMHV--SSEKHS 106 (245)
Q Consensus 50 p~~~~~~~~~~~~~g~~~~l~C~~~---~~~~~~~~w~~~~~~~~~------------------~~~~~~~~--~~~~~~ 106 (245)
+.+...+..+.+.+|+.+.|.|.+. +.+.+.+.|++.+..... ..+..+.. ......
T Consensus 6 ~~v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 85 (268)
T 3mj6_A 6 PGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGS 85 (268)
T ss_dssp ------CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCC
T ss_pred cccccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEE
Confidence 3444556667888999999999997 666778999985432111 12222211 122367
Q ss_pred EEEccCCCCCCeEEEEEEEeCCce--eEEEEEEEecCCCCccccCccccCCCeeEEEEEe---CCCCCceEEEEEEEeec
Q psy12131 107 LLVRHIKDTDFGNYMCQASNNLGS--SQQFIQLSGIPNIPVFQKSSRRLGPDGYRLVWQV---DTYSGIIQYLLKFRERE 181 (245)
Q Consensus 107 l~i~~~~~~d~g~y~C~~~n~~g~--~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~ 181 (245)
|.|.++..+|.|.|.|.+.|..+. ....+.+.+.+.+|.. .....++.+.|.|.+ .+. |...+ .|++..+
T Consensus 86 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~p~~---~~v~~G~~v~L~C~~~~~~~~-p~~~v-~W~~~~~ 160 (268)
T 3mj6_A 86 LLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLPEEPRD---LRVRVGDTTQMRCSIQSTEEK-RVTKV-NWMFSSG 160 (268)
T ss_dssp EEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEECCCCSE---EEEETTCCEEECCBCEESSSS-CCCEE-EEEEECT
T ss_pred EEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEeccCCCc---cccccCCcEEEEEEecCCCCC-Cccce-EEEecCC
Confidence 999999999999999999987543 3456666666555542 234678899999998 333 32233 3444322
Q ss_pred CC-CCeEEEe----------eCCCCCC-------CcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceEEe
Q psy12131 182 EL-TPWRNIV----------IPSDGSL-------AGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYVFA 239 (245)
Q Consensus 182 ~~-~~~~~~~----------~~~~~~~-------~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~~ 239 (245)
.. ..-..+. ....... ........+.|.++...+.+.|+|.|.|..|....+..+.+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~ 236 (268)
T 3mj6_A 161 SHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVV 236 (268)
T ss_dssp TCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEEE
Confidence 00 0111000 0000000 000123578899999999999999999988876555555553
No 305
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.60 E-value=1e-14 Score=105.67 Aligned_cols=130 Identities=17% Similarity=0.202 Sum_probs=87.7
Q ss_pred cceEEEee---cceEEEeccCCCCCEEEEEEEEcCCCC---ceeeEEEEEEec------CCeEEee-cceEEecCCCeEE
Q psy12131 2 KEIELLYN---RESLDLDRVTLKLAGLYQCIASNNIGE---STSKNFIVNVIY------PPEVSVE-KQWIHTAPDMRAE 68 (245)
Q Consensus 2 ~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~~~~~~~~---~~~~~~~l~v~~------~p~~~~~-~~~~~~~~g~~~~ 68 (245)
+|+.+..+ ..+|.|.+++.+|+|.|+|.+.+..+. .......|.|.. +|.+... +....+..|+.+.
T Consensus 65 ~r~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~ 144 (246)
T 4dzb_B 65 DKFLINHASLTLSTLTVTSAHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKAT 144 (246)
T ss_dssp GGEEEEEEETTEEEEEECSCCGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEE
T ss_pred CcEEEEecCCCEEEEEECCCCHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEE
Confidence 46666542 346999999999999999999975431 123445677763 5555433 2233345699999
Q ss_pred EEEEEeecCCC--eEEEEECCEEeccCCcEEEEe-------cCc----eeEEEEccCCCCC-CeEEEEEEEeCCcee
Q psy12131 69 IICNVYANPPA--KVEWFRDGTAITLGGRIDMHV-------SSE----KHSLLVRHIKDTD-FGNYMCQASNNLGSS 131 (245)
Q Consensus 69 l~C~~~~~~~~--~~~w~~~~~~~~~~~~~~~~~-------~~~----~~~l~i~~~~~~d-~g~y~C~~~n~~g~~ 131 (245)
|.|.+.+.+++ .+.|++++..+.......... ... .+.|.|.....+| .|.|+|.+.|.....
T Consensus 145 L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~~~ 221 (246)
T 4dzb_B 145 LVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSE 221 (246)
T ss_dssp EEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCT
T ss_pred EEEEEccCcCCceEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCCCC
Confidence 99999987654 899999998876532111000 011 1357888887777 999999999976443
No 306
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.60 E-value=1.3e-14 Score=104.68 Aligned_cols=129 Identities=16% Similarity=0.239 Sum_probs=86.1
Q ss_pred cceEEEee---cceEEEeccCCCCCEEEEEEEEcC--CCCceeeEEEEEEe------cCCeEEee-cceEEecCCCeEEE
Q psy12131 2 KEIELLYN---RESLDLDRVTLKLAGLYQCIASNN--IGESTSKNFIVNVI------YPPEVSVE-KQWIHTAPDMRAEI 69 (245)
Q Consensus 2 ~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~~~~~--~~~~~~~~~~l~v~------~~p~~~~~-~~~~~~~~g~~~~l 69 (245)
+|+.+..+ ..+|.|.+++.+|+|.|+|.+.+. ..........|.|. .+|.+... +....+..|+.+.|
T Consensus 63 ~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L 142 (240)
T 3q5y_A 63 SRFSVQQFDDYHSEMNMSALELEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATL 142 (240)
T ss_dssp TTEEEEECTTSCEEEEECSCCGGGCEEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEE
T ss_pred CeEEEEeCCCCEEEEEECcCChhHCEEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEE
Confidence 46666642 346999999999999999999832 22223344566766 34555432 22233456899999
Q ss_pred EEEEee-cCCC-eEEEEECCEEeccCCcE----EEEecCc---eeEEEEccCCCCC-CeEEEEEEEeCCce
Q psy12131 70 ICNVYA-NPPA-KVEWFRDGTAITLGGRI----DMHVSSE---KHSLLVRHIKDTD-FGNYMCQASNNLGS 130 (245)
Q Consensus 70 ~C~~~~-~~~~-~~~w~~~~~~~~~~~~~----~~~~~~~---~~~l~i~~~~~~d-~g~y~C~~~n~~g~ 130 (245)
.|.+.+ .|.+ .+.|++++..+...... .....+. .+.|.|......| .|.|+|.+.|....
T Consensus 143 ~C~~~g~~P~~~~v~W~~~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~~~ 213 (240)
T 3q5y_A 143 VCLARGFFPDHVELSWWVNGKEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGLS 213 (240)
T ss_dssp EEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred EEEEeeEECCCeEEEEEECCEECcCcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCC
Confidence 999988 5556 79999999887653221 1111111 2358888888778 67999999987543
No 307
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.59 E-value=1.4e-13 Score=99.64 Aligned_cols=175 Identities=11% Similarity=0.124 Sum_probs=105.0
Q ss_pred EEeecceEEecCCCeEEEEEEEeecC-----CCeEEEEECC--E--E-ec---------cCCcEEEEecCceeEEEEccC
Q psy12131 52 VSVEKQWIHTAPDMRAEIICNVYANP-----PAKVEWFRDG--T--A-IT---------LGGRIDMHVSSEKHSLLVRHI 112 (245)
Q Consensus 52 ~~~~~~~~~~~~g~~~~l~C~~~~~~-----~~~~~w~~~~--~--~-~~---------~~~~~~~~~~~~~~~l~i~~~ 112 (245)
+...+..+.+.+|+.+.|.|.+.+.+ .+.+.|++.. . . +. ...++.+...+....|.|.++
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 83 (247)
T 1svz_A 4 MTQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRV 83 (247)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSC
T ss_pred EEecCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCC
Confidence 34455677889999999999998887 6899999832 1 1 11 134565554555678999999
Q ss_pred CCCCCeEEEEEEEeCCce-eE--EEEEEEecCC----------CCcc-c--cCccccCCCeeEEEEEeCCCCCceEEEEE
Q psy12131 113 KDTDFGNYMCQASNNLGS-SQ--QFIQLSGIPN----------IPVF-Q--KSSRRLGPDGYRLVWQVDTYSGIIQYLLK 176 (245)
Q Consensus 113 ~~~d~g~y~C~~~n~~g~-~~--~~~~~~~~~~----------~p~~-~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 176 (245)
+.+|.|.|.|.+.|..+. .. ..+.+...+. ++.. . .......++.+.|.|...+.++......|
T Consensus 84 ~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W 163 (247)
T 1svz_A 84 EAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKATNYAFTDYSMHW 163 (247)
T ss_dssp CGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEE
T ss_pred CHHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEEEEEcCcccCCcEEEE
Confidence 999999999999987543 11 2333332211 2211 1 11235778999999999665322123446
Q ss_pred EEeec-CCCCeEEEeeCCC---------CCCC-----cceeeeEEEecCCCCCceEEEEEEEEec
Q psy12131 177 FRERE-ELTPWRNIVIPSD---------GSLA-----GPIYTQSYNITGLQLFTQYEASVLAKNR 226 (245)
Q Consensus 177 ~~~~~-~~~~~~~~~~~~~---------~~~~-----~~~~~~~~~i~~l~~~~~y~~~v~a~N~ 226 (245)
|+... ....+........ .... .......+.|.++...+.+.|.|.|.|.
T Consensus 164 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 164 VKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp EEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred EEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 66532 0111110000000 0000 0111257999999999999999999995
No 308
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.59 E-value=7e-15 Score=106.29 Aligned_cols=136 Identities=13% Similarity=0.081 Sum_probs=86.8
Q ss_pred cceEEEee----cceEEEeccCCCCCEEEEEEEEcCCC-C-----ceeeEEEEEEecC-------CeEEee-cceEEecC
Q psy12131 2 KEIELLYN----RESLDLDRVTLKLAGLYQCIASNNIG-E-----STSKNFIVNVIYP-------PEVSVE-KQWIHTAP 63 (245)
Q Consensus 2 ~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~~~~~-~-----~~~~~~~l~v~~~-------p~~~~~-~~~~~~~~ 63 (245)
+|+.+..+ ..+|.|.+++.+|+|.|.|.+.+... . .....+.|.|... |.+... +....+..
T Consensus 67 ~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~~~ 146 (242)
T 1hxm_B 67 GKFEVDRIPETSTSTLTIHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAETKL 146 (242)
T ss_dssp TSEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGGGS
T ss_pred CeEEEEecCCCcEEEEEECCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhccc
Confidence 56777642 45799999999999999999997531 1 1123457777753 333222 22223456
Q ss_pred CCeEEEEEEEeec-CC-CeEEEEECCE-EeccCCc-EEEEecC---ceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEE
Q psy12131 64 DMRAEIICNVYAN-PP-AKVEWFRDGT-AITLGGR-IDMHVSS---EKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQ 136 (245)
Q Consensus 64 g~~~~l~C~~~~~-~~-~~~~w~~~~~-~~~~~~~-~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 136 (245)
|+.+.|.|.+.+. |. +.+.|++++. .+..... ......+ ..+.|.|..... + |.|+|.+.|..+.......
T Consensus 147 g~~v~L~C~~~g~~P~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~~~~~~~~~ 224 (242)
T 1hxm_B 147 QKAGTYLCLLEKFFPDVIKIHWEEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEKSL-D-KEHRCIVRHENNKNGVDQE 224 (242)
T ss_dssp SSCEEEEEEEEEESSCCEEEEEEESSSCCCCCCEECCCEECSSSEEEEEEEEECTGGG-G-SCEEEEEEETTSGGGSCEE
T ss_pred CCCceEEEEEeeEECCCeEEEEEcCCCEeecCccccceecCCCcEEEEEEEEEccccC-C-CEEEEEEEeCCCCCCceeE
Confidence 9999999999986 54 6999999886 4432110 0011111 124677876654 4 9999999998876544444
Q ss_pred EEe
Q psy12131 137 LSG 139 (245)
Q Consensus 137 ~~~ 139 (245)
+.+
T Consensus 225 ~~~ 227 (242)
T 1hxm_B 225 IIF 227 (242)
T ss_dssp EEE
T ss_pred eec
Confidence 444
No 309
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.59 E-value=1.7e-15 Score=106.96 Aligned_cols=119 Identities=12% Similarity=0.099 Sum_probs=81.5
Q ss_pred ceEEEeccCCCCCEEEEEEEEcCCCCc-eeeEEEE--EEecCCeEEeecceEEecCCCeEEEEEEEeec-CC-CeEEEEE
Q psy12131 11 ESLDLDRVTLKLAGLYQCIASNNIGES-TSKNFIV--NVIYPPEVSVEKQWIHTAPDMRAEIICNVYAN-PP-AKVEWFR 85 (245)
Q Consensus 11 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~~l--~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~~-~~~~w~~ 85 (245)
+.|.|.+++.+|+|.|+|.|.+..+.. ..+.+.+ .+..+|.+...+.......|+.+.|.|.+.|. |. +.+.|++
T Consensus 68 ~~L~I~~~~~~D~G~Y~C~a~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k 147 (207)
T 2vol_A 68 SELPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTKGRPKAPQVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVEWES 147 (207)
T ss_dssp EEEECCHHHHHTTCCEEEEEECTTCSSCEEEEECCCCCCCBCCEEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEEEEE
T ss_pred EEEEEehhHcCCCCEEEEEEEccCCCCceEEEeccCCCCCcCCeEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEEEEE
Confidence 469999999999999999999987752 2344444 45578887665543333468999999999985 44 3899999
Q ss_pred CCEEeccCCcEE-EEecCc----eeEEEEccCCCCCCeEEEEEEEeCCc
Q psy12131 86 DGTAITLGGRID-MHVSSE----KHSLLVRHIKDTDFGNYMCQASNNLG 129 (245)
Q Consensus 86 ~~~~~~~~~~~~-~~~~~~----~~~l~i~~~~~~d~g~y~C~~~n~~g 129 (245)
++..+....... ....+. .+.|.|......|.|.|+|.+.|...
T Consensus 148 ~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~ytC~a~n~~l 196 (207)
T 2vol_A 148 NGQPAENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGL 196 (207)
T ss_dssp TTEECSCEEECCCEECTTSCEEEEEEEEEEHHHHSSCCEEEEEEECTTS
T ss_pred CCEeccCcccCCceECCCCCEEEEEEEEECHHHcCCCCEEEEEEECCCC
Confidence 998764321111 111111 12455655555678999999999754
No 310
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.59 E-value=3.6e-13 Score=96.93 Aligned_cols=173 Identities=13% Similarity=0.096 Sum_probs=102.4
Q ss_pred EEeecceEEecCCCeEEEEEEEeecCCCeEEEEEC--CEEe---------------ccCCcEEEEe-cCceeEEEEccCC
Q psy12131 52 VSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRD--GTAI---------------TLGGRIDMHV-SSEKHSLLVRHIK 113 (245)
Q Consensus 52 ~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~--~~~~---------------~~~~~~~~~~-~~~~~~l~i~~~~ 113 (245)
+...+..+.+.+|+.+.|.|. .+.+.+.+.|+++ +... ....++.+.. ......|.|.+++
T Consensus 3 v~q~p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~ 81 (238)
T 2p1y_A 3 VTQSPRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELAT 81 (238)
T ss_dssp EEEECSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCC
T ss_pred ceECccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCC
Confidence 344566778899999999999 7788899999984 2110 1123454443 2345689999999
Q ss_pred CCCCeEEEEEEEeCCcee-----EEEEEEEecCCCC-----------cccc---CccccCCCeeEEEEEeCCCCCceEEE
Q psy12131 114 DTDFGNYMCQASNNLGSS-----QQFIQLSGIPNIP-----------VFQK---SSRRLGPDGYRLVWQVDTYSGIIQYL 174 (245)
Q Consensus 114 ~~d~g~y~C~~~n~~g~~-----~~~~~~~~~~~~p-----------~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~ 174 (245)
.+|.|.|.|.+.|..|.. .....+.+...++ .+.. ......++.+.|.|.+.+.++. ..
T Consensus 82 ~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~--~i 159 (238)
T 2p1y_A 82 PSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYENSAFD--YF 159 (238)
T ss_dssp GGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEECCCTTCC--EE
T ss_pred cccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEEecCCCC--cE
Confidence 999999999999875421 1122333322221 1111 1235678999999999665432 34
Q ss_pred EEEEeec-CCCCeEEEeeCCC----CCCC-----cceeeeEEEecCCCCCceEEEEEEEEecC
Q psy12131 175 LKFRERE-ELTPWRNIVIPSD----GSLA-----GPIYTQSYNITGLQLFTQYEASVLAKNRF 227 (245)
Q Consensus 175 ~~~~~~~-~~~~~~~~~~~~~----~~~~-----~~~~~~~~~i~~l~~~~~y~~~v~a~N~~ 227 (245)
.|+++.. ....+........ .... .......+.|.++...+.+.|.|.|.|..
T Consensus 160 ~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 160 PWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp EEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred EEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 4565532 1111111000000 0000 00112579999999999999999999983
No 311
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=99.59 E-value=1.3e-13 Score=108.45 Aligned_cols=217 Identities=17% Similarity=0.152 Sum_probs=127.9
Q ss_pred cceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEee-c-C------CCeE
Q psy12131 10 RESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYA-N-P------PAKV 81 (245)
Q Consensus 10 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~-~------~~~~ 81 (245)
.+.|+|.+++..|+|.|.|.+.+ +. ....+.|.|..+|....... ....... .+.|.-.. . . ...+
T Consensus 250 ~~~L~I~nl~~sd~g~y~~~C~~--~~-~i~~~~l~v~~pP~~P~nl~-C~~~~~~--svtcsW~pg~~~~l~G~~~t~Y 323 (488)
T 2q7n_A 250 TVAIHILNIPVSENSGTNIIFIT--DD-DVYGTVVFAGYPPDVPQKLS-CETHDLK--EIICSWNPGRITGLVGPRNTEY 323 (488)
T ss_dssp CEEEECCSCCCCCSSCEEEEEEE--SS-CEEEEEEEEECCCCCCCSCE-EEBSSSS--EEEEEECCCSCCCCCTTSSCEE
T ss_pred EEEEEEeCCCcccCCcEEEEEEc--CC-eEEEEEEEeeCCCCCCcccE-EEEcCCC--EEEEEEeCCCcCCCCCCCceeE
Confidence 35699999999999998887763 22 34467778877776432221 1111223 33444321 1 1 1122
Q ss_pred EEE--ECCEE--eccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEE----ecCCCCccccCcccc
Q psy12131 82 EWF--RDGTA--ITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLS----GIPNIPVFQKSSRRL 153 (245)
Q Consensus 82 ~w~--~~~~~--~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~----~~~~~p~~~~~~~~~ 153 (245)
..+ ..+.. ...... ..+....+.+..........+.+.|.|..|.....+.+. ++|.||...... ..
T Consensus 324 ~L~y~~~g~~~~c~~~~~----~~~~~~~ct~~l~~~~t~Y~f~V~A~N~~G~~~S~~~~~~~~~v~P~PP~nl~v~-~~ 398 (488)
T 2q7n_A 324 TLFESISGKSAVFHRIEG----LTNETYRLGVQMHPGQEIHNFTLTGRNPLGQAQSAVVINVTERVAPHDPTSLKVK-DI 398 (488)
T ss_dssp EEEETTTCCEEEEECSSC----CCSSCEEEEEECCSSCCCCEEEEEEEETTEEEEEEEECCGGGTBCCCCCEEEEEE-EC
T ss_pred EEEEEECCCCCCCccccc----cCCceEEEEEcCCCCccEEEEEEEEEeCCCCccceEEEEecCCCCCCCCeEEEEE-ec
Confidence 221 11111 000000 001223444543333466788999999998854432222 346677655432 24
Q ss_pred CCCeeEEEEEeC--CCCCceEEEEEEEeecCCCCeEE-EeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCC-
Q psy12131 154 GPDGYRLVWQVD--TYSGIIQYLLKFREREELTPWRN-IVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGW- 229 (245)
Q Consensus 154 ~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~- 229 (245)
....+.|+|.++ .++.++.|.+.|+... ...|.. ....... .....+.+.+|.+++.|.|+|+|.| .|.
T Consensus 399 s~~sl~LsW~pP~~~~g~~l~YeV~Yr~~~-~~~w~~~~~~~~~~-----~~~~~v~l~~L~P~T~Y~~rVRA~~-~g~G 471 (488)
T 2q7n_A 399 NSTVVTFSWYLPGNFTKINLLCQIEICKAN-SKKEVRNATIRGAE-----DSTYHVAVDKLNPYTAYTFRVRCSS-KTFW 471 (488)
T ss_dssp STTCEEEEEEEEEECSSSEEEEEEEEBCTT-SCCEEEEEEEECCE-----EEEEEEEECSCCSSCCBBCCEEEEE-SSCS
T ss_pred CCCEEEEEEeCCCCCCCcceEEEEEEEECC-CCCceEEEEEecCC-----CcEEEEEeCCCCCCceEEEEEEEEE-CCCC
Confidence 677899999984 3457789999999865 445632 2221110 0113338999999999999999999 887
Q ss_pred --CCCCcceEEecCCCC
Q psy12131 230 --SRPSKAYVFATEGAE 244 (245)
Q Consensus 230 --~~~s~~~~~~t~~~~ 244 (245)
|++|..+.++|.+.+
T Consensus 472 ~WS~WS~~v~~~T~e~a 488 (488)
T 2q7n_A 472 KWSRWSDEKRHLTTEAT 488 (488)
T ss_dssp SCCCCCCCCCBCCCCCC
T ss_pred CCCCCcCCEeEECCCCC
Confidence 689999999998764
No 312
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=99.59 E-value=8.8e-14 Score=104.91 Aligned_cols=166 Identities=17% Similarity=0.160 Sum_probs=106.4
Q ss_pred EEeecceEEecCCCeEEEEEEEeecC-CCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCce
Q psy12131 52 VSVEKQWIHTAPDMRAEIICNVYANP-PAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGS 130 (245)
Q Consensus 52 ~~~~~~~~~~~~g~~~~l~C~~~~~~-~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~ 130 (245)
+..++..+.+..|.++.|.|.+.+.+ .+.+.|++++..+..... .... ....|.|.++...|.|.|+|.. .|.
T Consensus 9 ~~~p~~~v~~~~G~~v~l~C~~~~~~~~~~i~W~~~~~~~~~~~~-~~~~--~~~~L~i~~v~~~d~G~Y~C~~---~g~ 82 (325)
T 1n26_A 9 QEVARGVLTSLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHPS-RWAG--MGRRLLLRSVQLHDSGNYSCYR---AGR 82 (325)
T ss_dssp CCCCTTEEEECTTCCEEEECTTSCTTCCSEEEEEEECSSSSCCCE-EEEE--ESSEEEECSCCGGGCEEEEEES---SSS
T ss_pred cccCCCcEECCCCCcEEEEeCCCCCCCCceEEEEECCccCCcccc-cccc--ccceEEecccchhhCeEeEEEe---CCE
Confidence 33445555567999999999998755 679999997765422221 1111 2357999999999999999993 444
Q ss_pred eEEEEEEE--ecCCCCccccCccccCCCeeEEEEEeCCC-CCceEEEEEEEeec--CCCCe-EEEee-CCCCCCCcceee
Q psy12131 131 SQQFIQLS--GIPNIPVFQKSSRRLGPDGYRLVWQVDTY-SGIIQYLLKFRERE--ELTPW-RNIVI-PSDGSLAGPIYT 203 (245)
Q Consensus 131 ~~~~~~~~--~~~~~p~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~--~~~~~-~~~~~-~~~~~~~~~~~~ 203 (245)
....+.|. ..|..|. ...........+.+.|.+..+ .+...|.+.|+... ....| ..+.. .... .
T Consensus 83 ~~~~~~L~V~~pP~~P~-l~c~~~~~~~~~~c~W~~~~~~~~~~~y~l~~~~~~~~~~~~~~~~c~~~~~~~-------~ 154 (325)
T 1n26_A 83 PAGTVHLLVDVPPEEPQ-LSCFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQ-------K 154 (325)
T ss_dssp CSCEEEEEECCCCCCCC-CEEEBSSTTSCEEEEECCSSCCCTTCEEEEEEEEESSSSCEEEEEEEEEETTTT-------E
T ss_pred EeeeEEEEeccCCCCCc-eeEEeecCCCcEEEEECCCCCCCCCceEEEEEEEccCCCCCcccccCCCCCCCC-------C
Confidence 44444444 4455554 221111235589999997432 24478988887642 11222 23321 1111 2
Q ss_pred eEEEecCCC-CCceEEEEEEEEecCCCCC
Q psy12131 204 QSYNITGLQ-LFTQYEASVLAKNRFGWSR 231 (245)
Q Consensus 204 ~~~~i~~l~-~~~~y~~~v~a~N~~G~~~ 231 (245)
..+.+..+. +...|.|+|.|.|..|.+.
T Consensus 155 ~~c~i~~~~~~~~~Y~f~v~A~N~~G~~~ 183 (325)
T 1n26_A 155 FSCQLAVPEGDSSFYIVSMCVASSVGSKF 183 (325)
T ss_dssp EEEEECCCTTCCCEEEEEEEEEETTEEEE
T ss_pred EEEEECCCcccCcEEEEEEEEEcCCCCcc
Confidence 567887775 7899999999999999874
No 313
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.59 E-value=4.5e-14 Score=88.00 Aligned_cols=82 Identities=22% Similarity=0.289 Sum_probs=66.8
Q ss_pred cCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEE--Eec---CceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEE
Q psy12131 62 APDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDM--HVS---SEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQ 136 (245)
Q Consensus 62 ~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~--~~~---~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 136 (245)
..+..+.|.|.+.|.|.|.+.|++++..+........ ... ...+.|.|.++..+|.|.|+|.|.|..|.....+.
T Consensus 14 ~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~~~ 93 (103)
T 1wwb_X 14 TSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQIS 93 (103)
T ss_dssp CCCCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred eECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEE
Confidence 4678899999999999999999999998887654322 111 12346999999999999999999999999999988
Q ss_pred EEecCCC
Q psy12131 137 LSGIPNI 143 (245)
Q Consensus 137 ~~~~~~~ 143 (245)
|.+...|
T Consensus 94 l~V~~~P 100 (103)
T 1wwb_X 94 AHFMGWP 100 (103)
T ss_dssp ECCSCCC
T ss_pred EEECCCC
Confidence 8876443
No 314
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.59 E-value=5.3e-14 Score=99.57 Aligned_cols=174 Identities=13% Similarity=0.101 Sum_probs=103.4
Q ss_pred cceEEecCCCeEEEEEEEeecCCC---eEEEEECCEEeccC------------------CcEEEEe---cCceeEEEEcc
Q psy12131 56 KQWIHTAPDMRAEIICNVYANPPA---KVEWFRDGTAITLG------------------GRIDMHV---SSEKHSLLVRH 111 (245)
Q Consensus 56 ~~~~~~~~g~~~~l~C~~~~~~~~---~~~w~~~~~~~~~~------------------~~~~~~~---~~~~~~l~i~~ 111 (245)
+..+.+..|+.+.|.|.+.+.+.+ .+.|++++...... .++.... .....+|.|.+
T Consensus 6 p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~ 85 (218)
T 4frw_A 6 SDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRN 85 (218)
T ss_dssp CSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEESS
T ss_pred CCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEee
Confidence 446778899999999999988776 48999866432211 0111100 11235799999
Q ss_pred CCCCCCeEEEEEEEeCCceeEE-EEEEEecC-CCCccc--cCccccCCCeeEEEEEeCCCCCceEEEEEEEeecCCCCeE
Q psy12131 112 IKDTDFGNYMCQASNNLGSSQQ-FIQLSGIP-NIPVFQ--KSSRRLGPDGYRLVWQVDTYSGIIQYLLKFREREELTPWR 187 (245)
Q Consensus 112 ~~~~d~g~y~C~~~n~~g~~~~-~~~~~~~~-~~p~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (245)
+..+|.|.|.|.+.+..+.... ...+.+.. .++... .......+..+.+.|.+.+.+++ . ..|+++.. .....
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p-~-i~W~~~~~-~~~~~ 162 (218)
T 4frw_A 86 AVQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGSPAP-S-VTWDTEVK-GTTSS 162 (218)
T ss_dssp CCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEEEEBSCC-E-EEEEESSC-CEEEE
T ss_pred ccHHHCCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeeccCCcCc-e-EEEEECCc-ccccC
Confidence 9999999999999886654333 33333222 222211 12334567789999998665443 2 23455432 11111
Q ss_pred EEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcce
Q psy12131 188 NIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAY 236 (245)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~ 236 (245)
....... .......|.|..+...+...|+|.|.|..|.......+
T Consensus 163 ~~~~~~~----~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~ 207 (218)
T 4frw_A 163 RSFKHSR----SAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITH 207 (218)
T ss_dssp EEEECSS----SEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEE
T ss_pred ceEecCC----cEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEE
Confidence 1111111 11123468888888877778888899999987654443
No 315
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.58 E-value=5.5e-15 Score=102.50 Aligned_cols=142 Identities=9% Similarity=0.125 Sum_probs=95.4
Q ss_pred EecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEcc-CCCCCCeEEEEEEEeCCceeEEEEEEE
Q psy12131 60 HTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRH-IKDTDFGNYMCQASNNLGSSQQFIQLS 138 (245)
Q Consensus 60 ~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~g~y~C~~~n~~g~~~~~~~~~ 138 (245)
....|+.+.|.|.+.+ + +.+.|++++..+... ....|.|.+ +..+|.|.|+|.|.|..|.....+.+.
T Consensus 10 v~~~G~~v~L~C~~~~-~-~~i~W~k~g~~l~~~---------~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~ 78 (186)
T 1jbj_A 10 VSISGTSVELTCPLDS-D-ENLKWEKNGQELPQK---------HDKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKAR 78 (186)
T ss_dssp EEEETTEEEEECSSCC-C-TTCEEEETTEEECSC---------CCSEEEEESCCTTTSCEEEEEECSSCCCCCCEEECCC
T ss_pred EEeCCcEEEEEEeCCC-C-CceEEEECCEECCCC---------CCCEEEECCCCccccCEEEEEEEEeCCCcEEEEEEEE
Confidence 3467999999999987 4 349999999988753 123699999 999999999999999988755555444
Q ss_pred ecCCCCc-----------------cccC----------ccccCCCeeEEEEEeCCCCCceEEEEEEEeecCCCCeEEEee
Q psy12131 139 GIPNIPV-----------------FQKS----------SRRLGPDGYRLVWQVDTYSGIIQYLLKFREREELTPWRNIVI 191 (245)
Q Consensus 139 ~~~~~p~-----------------~~~~----------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (245)
+....+. +... .....++.+.|.|.+ ..|. ..|+++.. .+..
T Consensus 79 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~--p~p~---i~W~k~g~------~i~~ 147 (186)
T 1jbj_A 79 VGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL--TDKT---IKWLKDGS------IISP 147 (186)
T ss_dssp CCSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS--SCSC---EEEEETTE------ECCC
T ss_pred EecccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC--CCCe---EEEEECCE------ECcc
Confidence 3211110 0000 112378899999998 2232 22455433 0100
Q ss_pred CCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCC
Q psy12131 192 PSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWS 230 (245)
Q Consensus 192 ~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~ 230 (245)
... ....+.|.++...+.+.|+|.|.|..|..
T Consensus 148 ~~~-------~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 148 LNA-------TKNTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp SSC-------CSSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred cCC-------CcceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 000 11457778888999999999999999865
No 316
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.58 E-value=1.3e-14 Score=91.73 Aligned_cols=93 Identities=24% Similarity=0.297 Sum_probs=76.0
Q ss_pred cCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEecc-CCcEEEEec-CceeEEEEccCCCCCCeEEEEEEE
Q psy12131 48 YPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITL-GGRIDMHVS-SEKHSLLVRHIKDTDFGNYMCQAS 125 (245)
Q Consensus 48 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~-~~~~~~~~~-~~~~~l~i~~~~~~d~g~y~C~~~ 125 (245)
.+|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++++..+.. ..++.+... .....|.|.++..+|.|.|.|.+.
T Consensus 7 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 86 (110)
T 2dm2_A 7 GAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAA 86 (110)
T ss_dssp CCCCBSSCCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEEEE
T ss_pred CCCEEEecCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEEEE
Confidence 467777777778889999999999999999999999999988765 445655543 344589999999999999999999
Q ss_pred eCCceeEEEEEEEec
Q psy12131 126 NNLGSSQQFIQLSGI 140 (245)
Q Consensus 126 n~~g~~~~~~~~~~~ 140 (245)
|..|.....+.|.+.
T Consensus 87 N~~g~~~~~~~l~V~ 101 (110)
T 2dm2_A 87 NPQGRISCTGRLMVQ 101 (110)
T ss_dssp CTTCCEEECCCEEEE
T ss_pred ECCCeEEEEEEEEEE
Confidence 999987776555554
No 317
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.58 E-value=4.6e-14 Score=100.41 Aligned_cols=176 Identities=10% Similarity=0.002 Sum_probs=99.5
Q ss_pred eEEecCCCeEEEEEEEeecCCC---eEEEEECCEEecc----------------CCcEEE-------EecCceeEEEEcc
Q psy12131 58 WIHTAPDMRAEIICNVYANPPA---KVEWFRDGTAITL----------------GGRIDM-------HVSSEKHSLLVRH 111 (245)
Q Consensus 58 ~~~~~~g~~~~l~C~~~~~~~~---~~~w~~~~~~~~~----------------~~~~~~-------~~~~~~~~l~i~~ 111 (245)
.+.+..|+.+.|.|.+.+.+.+ .+.|++++..+.. ..+... .......+|.|.+
T Consensus 10 ~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~ 89 (225)
T 4fmk_A 10 EVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFRG 89 (225)
T ss_dssp EEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEECS
T ss_pred EEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEcc
Confidence 3567789999999999887766 4899997543210 011111 0112345799999
Q ss_pred CCCCCCeEEEEEEEeCCceeEEE-EEEEecCCCCc--cccCccccCCCeeEEEEEeCCCCCceEEEEEEEeecCCCCeEE
Q psy12131 112 IKDTDFGNYMCQASNNLGSSQQF-IQLSGIPNIPV--FQKSSRRLGPDGYRLVWQVDTYSGIIQYLLKFREREELTPWRN 188 (245)
Q Consensus 112 ~~~~d~g~y~C~~~n~~g~~~~~-~~~~~~~~~p~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (245)
++.+|.|.|.|.+.|..+..... ..+.+...++. .........+..+.+.|...+..|... ..|+++.........
T Consensus 90 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~-~~w~~~~~~~~~~~~ 168 (225)
T 4fmk_A 90 LRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCVSTGGRPPAR-ITWISSLGGEAKDTQ 168 (225)
T ss_dssp CCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCE-EEEECSSCCEEEEEE
T ss_pred CCHHHCcceEEEEEeCCCcceeeeeeeeeecCCceeecccceeecceeeeeeeeeecCCCCCCE-EEEEECCccccCCcc
Confidence 99999999999999876654433 23333222221 222233355667777777633323222 224443221111111
Q ss_pred EeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceE
Q psy12131 189 IVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYV 237 (245)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~ 237 (245)
......+ .......|.|..+...+...|+|.|.|..|....+..+.
T Consensus 169 ~~~~~~~---~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~ 214 (225)
T 4fmk_A 169 EPGIQAG---TVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVT 214 (225)
T ss_dssp EECSSTT---CEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEE
T ss_pred eEEecCC---CEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEE
Confidence 1111111 111124578888877777777788999998876555443
No 318
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.58 E-value=1e-14 Score=90.40 Aligned_cols=91 Identities=19% Similarity=0.303 Sum_probs=75.0
Q ss_pred EecCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEE
Q psy12131 46 VIYPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQAS 125 (245)
Q Consensus 46 v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 125 (245)
+..+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+...... .......|.|.++..+|.|.|.|.+.
T Consensus 8 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~---~~~~~~~L~i~~v~~~D~G~Y~C~a~ 84 (99)
T 2yr3_A 8 MEVAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARST---CEAGVAELHIQDALPEDHGTYTCLAE 84 (99)
T ss_dssp CCEEEEEEECCCCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSCCCE---EETTEEEEEECSCCTTCCBCEEEEEE
T ss_pred cccCCceeecCCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECcccceE---eeCCeEEEEECCCChhhCEEEEEEEE
Confidence 445788877777888999999999999999999999999999877654332 22345689999999999999999999
Q ss_pred eCCceeEEEEEEEe
Q psy12131 126 NNLGSSQQFIQLSG 139 (245)
Q Consensus 126 n~~g~~~~~~~~~~ 139 (245)
|..|.....+.|.+
T Consensus 85 N~~g~~~~~~~l~V 98 (99)
T 2yr3_A 85 NALGQVSCSAWVTV 98 (99)
T ss_dssp CSSCEEEEECCEEE
T ss_pred ECCCeEEEEEEEEE
Confidence 99998777766654
No 319
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.58 E-value=2e-14 Score=87.66 Aligned_cols=79 Identities=16% Similarity=0.153 Sum_probs=68.9
Q ss_pred CCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCC
Q psy12131 49 PPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNL 128 (245)
Q Consensus 49 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 128 (245)
+|.+...+....+.+|+.+.|.|.+.+ +.+.+.|++++..+....++.+...+....|.|.++..+|.|.|+|.+.|..
T Consensus 5 ~~~~~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n~~ 83 (93)
T 1waa_A 5 LIEVEKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAANTK 83 (93)
T ss_dssp CCCEEECCCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETTEE
T ss_pred CcEeeccCcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEECCCc
Confidence 566777777888999999999999975 5578999999999988888888777777899999999999999999999853
No 320
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.58 E-value=1.8e-14 Score=89.45 Aligned_cols=91 Identities=21% Similarity=0.368 Sum_probs=74.4
Q ss_pred cCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEecc-CCcEEEEecCceeEEEEccCCCCCCeEEEEEEEe
Q psy12131 48 YPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITL-GGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASN 126 (245)
Q Consensus 48 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 126 (245)
.+|.+...+....+..|+.+.|.|.+.|.|.|.+.|++++..+.. ..++.+. ....|.|.++..+|.|.|.|.+.|
T Consensus 7 ~~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~---~~~~L~i~~v~~~d~G~Y~C~a~n 83 (100)
T 2edj_A 7 GPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQ---EQGTLQIKNLRISDTGTYTCVATS 83 (100)
T ss_dssp SSCEEEECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEEC---TTCCEEEESCCTTTCCEEEEEEEC
T ss_pred CCCEEEeCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEEc---CCCEEEEccCCcccCEEEEEEEEc
Confidence 467777777778889999999999999999999999999987763 3344332 234799999999999999999999
Q ss_pred CCceeEEEEEEEecC
Q psy12131 127 NLGSSQQFIQLSGIP 141 (245)
Q Consensus 127 ~~g~~~~~~~~~~~~ 141 (245)
..|.....+.|.+..
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (100)
T 2edj_A 84 SSGETSWSAVLDVTE 98 (100)
T ss_dssp SSCCCBCCEEEEEES
T ss_pred CCCCEEEEEEEEEec
Confidence 999887777776653
No 321
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.58 E-value=2.5e-14 Score=90.80 Aligned_cols=102 Identities=18% Similarity=0.291 Sum_probs=82.0
Q ss_pred eeeEEEEEEec-CCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCC
Q psy12131 38 TSKNFIVNVIY-PPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTD 116 (245)
Q Consensus 38 ~~~~~~l~v~~-~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 116 (245)
.+..+.|.|.. +|.+...+....+.+|+.+.|.|.+.+. |.+.|++++..+....++.+...+....|.|.++..+|
T Consensus 7 ~~~~~~l~V~~~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
T 2edh_A 7 GRTSAMLTVRALPIKFTEGLRNEEATEGATAVLRCELSKM--APVEWWKGHETLRDGDRHSLRQDGARCELQIRGLVAED 84 (113)
T ss_dssp CCCCCCCCCCCSCCCEEECCCCCEECTTSCEEEEEEESSC--CCCEEEESSSBCCCSSSEEEEEETTEEEEEECSCCSTT
T ss_pred CcEEEEEEEEcCCCcccccCCceEEeCCCeEEEEEEECCC--CcEEEEECCEECCCCCcEEEEECCCEEEEEECCCChhh
Confidence 46667788875 4577777777889999999999999764 78999999998887788888777777799999999999
Q ss_pred CeEEEEEEEeCCceeEEEEEEEecCCCCc
Q psy12131 117 FGNYMCQASNNLGSSQQFIQLSGIPNIPV 145 (245)
Q Consensus 117 ~g~y~C~~~n~~g~~~~~~~~~~~~~~p~ 145 (245)
.|.|.|.+ +.....+.|.+...|..
T Consensus 85 ~G~Y~C~a----~~~~~~~~l~V~~~p~~ 109 (113)
T 2edh_A 85 AGEYLCMC----GKERTSAMLTVRAMPSG 109 (113)
T ss_dssp CEEEEEEE----TTEEEEEEEEECCCCCS
T ss_pred CEEEEEEe----CCCCEEEEEEEeCCCCC
Confidence 99999999 44555666666654443
No 322
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.58 E-value=5.4e-15 Score=107.61 Aligned_cols=129 Identities=14% Similarity=0.144 Sum_probs=72.4
Q ss_pred cceEEEee----cceEEEeccCCCCCEEEEEEEEcCCCC------------ceeeEEEEEEec----CCeEEeecceEEe
Q psy12131 2 KEIELLYN----RESLDLDRVTLKLAGLYQCIASNNIGE------------STSKNFIVNVIY----PPEVSVEKQWIHT 61 (245)
Q Consensus 2 ~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~~~~~~------------~~~~~~~l~v~~----~p~~~~~~~~~~~ 61 (245)
+|+.+..+ ..+|.|.+++.+|+|.|.|.+.+..|. .......|.|.. +|.+........+
T Consensus 66 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~~~P~v~~~~p~~~~ 145 (257)
T 3bn9_D 66 GRFTISRDNSKNTLYLQMSSLRAEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSASTKGPSVFPLAPSSKS 145 (257)
T ss_dssp TTEEEEEETTTTEEEEEEESCCGGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCCBCCEECCCCC----
T ss_pred CceEEEecCCCCEEEEEECCCChhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCCcCCcEEEecCcccc
Confidence 46666643 357999999999999999999987541 011335777764 4655443323335
Q ss_pred cCCCeEEEEEEEeec-CCC-eEEEEECCEEeccCCcEEEEecCc----eeEEEEccCCCCCCeEEEEEEEeCCcee
Q psy12131 62 APDMRAEIICNVYAN-PPA-KVEWFRDGTAITLGGRIDMHVSSE----KHSLLVRHIKDTDFGNYMCQASNNLGSS 131 (245)
Q Consensus 62 ~~g~~~~l~C~~~~~-~~~-~~~w~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~g~y~C~~~n~~g~~ 131 (245)
..|+.+.|.|.+.+. |.| .+.|++++..+.......+...+. .+.|.|......+ |.|+|.+.|.....
T Consensus 146 ~~g~~v~L~C~~~g~~P~pi~v~W~k~g~~~~~~~~~~~~~~~g~y~~~s~L~I~~~~~~~-g~YtC~v~n~~~~~ 220 (257)
T 3bn9_D 146 TSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNT 220 (257)
T ss_dssp -------CCCEEEEEBSSCCEEEETTTTCCSSCEECCCEECTTSCEEEEEECCCC--------CEEEEEEEGGGTE
T ss_pred cCCCcEEEEEEEeeEECCCcEEEEeeCCCcCCcEecCCeEcCCCCEEEEEEEEEcccccCC-CeEEEEEEecCCCc
Confidence 679999999999985 777 999999886532110000111111 2356777777667 99999999965443
No 323
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.58 E-value=3.4e-13 Score=98.17 Aligned_cols=170 Identities=15% Similarity=0.125 Sum_probs=102.4
Q ss_pred ceEEecCCCeEEEEEEEeec--CCCeEEEEECC--EE---ec---------cCCcEEEEecCceeEEEEccCCCCCCeEE
Q psy12131 57 QWIHTAPDMRAEIICNVYAN--PPAKVEWFRDG--TA---IT---------LGGRIDMHVSSEKHSLLVRHIKDTDFGNY 120 (245)
Q Consensus 57 ~~~~~~~g~~~~l~C~~~~~--~~~~~~w~~~~--~~---~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y 120 (245)
....+.+|+.+.|.|.+.+. +.+.+.|++.. .. +. ...++.+...+....|.|.+++.+|.|.|
T Consensus 10 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y 89 (256)
T 3ux9_B 10 PSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEADY 89 (256)
T ss_dssp SEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEE
T ss_pred CcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCEEE
Confidence 34678899999999999876 67899999832 11 10 22456555555567899999999999999
Q ss_pred EEEEEeCCce---eEEEEEEEecCCC--------------------Ccccc--CccccCCCeeEEEEEeCCCCCceEEEE
Q psy12131 121 MCQASNNLGS---SQQFIQLSGIPNI--------------------PVFQK--SSRRLGPDGYRLVWQVDTYSGIIQYLL 175 (245)
Q Consensus 121 ~C~~~n~~g~---~~~~~~~~~~~~~--------------------p~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~ 175 (245)
.|.+.+..+. ......|.+...+ +.+.. ......++.+.|.|...+.++......
T Consensus 90 ~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~ 169 (256)
T 3ux9_B 90 YCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVESGGGLVQPGGSLRLSCAASGFTFSSYAMS 169 (256)
T ss_dssp EEEEEETTTTEEEECCCEEEEEC----------------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEE
T ss_pred EEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcCCCeEEcCCCeEEEEEEEeCCcccccEEE
Confidence 9999986532 1122333332211 01111 123567899999999965432222344
Q ss_pred EEEeec-CCCCeEEEeeCCC-----------CC---CCcceeeeEEEecCCCCCceEEEEEEEEec
Q psy12131 176 KFRERE-ELTPWRNIVIPSD-----------GS---LAGPIYTQSYNITGLQLFTQYEASVLAKNR 226 (245)
Q Consensus 176 ~~~~~~-~~~~~~~~~~~~~-----------~~---~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~ 226 (245)
|+++.. ....+........ .. .........+.|.++...+.+.|.|.|.|.
T Consensus 170 W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 235 (256)
T 3ux9_B 170 WVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYID 235 (256)
T ss_dssp EEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred EEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCEEEEEEEEcC
Confidence 666532 1111110000000 00 000011356999999999999999999996
No 324
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.58 E-value=3.8e-14 Score=102.56 Aligned_cols=129 Identities=18% Similarity=0.242 Sum_probs=86.0
Q ss_pred cceEEEee---cceEEEeccCCCCCEEEEEEEEcCC---CCceeeEEEEEEe------cCCeEEee-cceEEecCCCeEE
Q psy12131 2 KEIELLYN---RESLDLDRVTLKLAGLYQCIASNNI---GESTSKNFIVNVI------YPPEVSVE-KQWIHTAPDMRAE 68 (245)
Q Consensus 2 ~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~~~~~~---~~~~~~~~~l~v~------~~p~~~~~-~~~~~~~~g~~~~ 68 (245)
+|+.+... ..+|.|.+++.+|+|.|+|.+.+.. .........|.|. .+|.+... +....+..|+.+.
T Consensus 64 ~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~ 143 (245)
T 4ei6_B 64 DQFSVERPDGSYFTLKIQPTALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKAT 143 (245)
T ss_dssp TTEEEECCTTSCEEEEECSCCGGGCEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEE
T ss_pred CCEEEEeccCceEEEEECCCCHhHCEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceE
Confidence 56777653 3369999999999999999999532 1123345567776 35554433 2223345689999
Q ss_pred EEEEEeec-CCC-eEEEEECCEEeccCCcEEEEe-------cCc----eeEEEEccCCCCC-CeEEEEEEEeCCce
Q psy12131 69 IICNVYAN-PPA-KVEWFRDGTAITLGGRIDMHV-------SSE----KHSLLVRHIKDTD-FGNYMCQASNNLGS 130 (245)
Q Consensus 69 l~C~~~~~-~~~-~~~w~~~~~~~~~~~~~~~~~-------~~~----~~~l~i~~~~~~d-~g~y~C~~~n~~g~ 130 (245)
|.|.+.+. |.+ .+.|++++..+.......... .+. .+.|.|......| .|.|+|.+.|....
T Consensus 144 l~C~~~g~~p~~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~~l~ 219 (245)
T 4ei6_B 144 LVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 219 (245)
T ss_dssp EEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred EEEEEeeEeCCCeEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEECCCC
Confidence 99999884 444 899999998876532111000 011 2357788777777 89999999996543
No 325
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.57 E-value=3.6e-14 Score=102.70 Aligned_cols=130 Identities=20% Similarity=0.261 Sum_probs=85.6
Q ss_pred cceEEEee---cceEEEeccCCCCCEEEEEEEEcCCC-----CceeeEEEEEEec------CCeEEee-cceEEecCCCe
Q psy12131 2 KEIELLYN---RESLDLDRVTLKLAGLYQCIASNNIG-----ESTSKNFIVNVIY------PPEVSVE-KQWIHTAPDMR 66 (245)
Q Consensus 2 ~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~~~~~~~-----~~~~~~~~l~v~~------~p~~~~~-~~~~~~~~g~~ 66 (245)
+|+.+..+ ..+|.|.+++.+|+|.|+|.+.+..| ........|.|.. +|.+... +....+..|+.
T Consensus 62 ~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~ 141 (245)
T 3nfj_J 62 QNLSASRPQDRQFILSSKKLLLSDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQK 141 (245)
T ss_dssp CSSEEEEEETTEEEEEESSCCGGGCEEEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSE
T ss_pred CcEEEEecCCCEEEEEECCCChhhCEEEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCc
Confidence 45555542 34699999999999999999998332 2123445677765 5655433 22223445899
Q ss_pred EEEEEEEeec-CCC-eEEEEECCEEeccCCcEEE---E-----ecC---ceeEEEEccCCCCC-CeEEEEEEEeCCcee
Q psy12131 67 AEIICNVYAN-PPA-KVEWFRDGTAITLGGRIDM---H-----VSS---EKHSLLVRHIKDTD-FGNYMCQASNNLGSS 131 (245)
Q Consensus 67 ~~l~C~~~~~-~~~-~~~w~~~~~~~~~~~~~~~---~-----~~~---~~~~l~i~~~~~~d-~g~y~C~~~n~~g~~ 131 (245)
+.|.|.+.+. |.+ .+.|++++..+........ . ..+ ..+.|.|......| .|.|+|.+.+.....
T Consensus 142 ~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~~~~ 220 (245)
T 3nfj_J 142 ATLVCLATGFFPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSE 220 (245)
T ss_dssp EEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCS
T ss_pred eEEEEEEccCcCCCEEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEECCCCC
Confidence 9999999985 444 7899999988765321110 0 011 02467777777667 679999999976443
No 326
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.57 E-value=9.1e-13 Score=95.40 Aligned_cols=167 Identities=11% Similarity=0.093 Sum_probs=102.1
Q ss_pred eEEecCCCeEEEEEEEeecC--CCeEEEEECC--EEe-----------------ccCCcEEEEe--cCceeEEEEccCCC
Q psy12131 58 WIHTAPDMRAEIICNVYANP--PAKVEWFRDG--TAI-----------------TLGGRIDMHV--SSEKHSLLVRHIKD 114 (245)
Q Consensus 58 ~~~~~~g~~~~l~C~~~~~~--~~~~~w~~~~--~~~-----------------~~~~~~~~~~--~~~~~~l~i~~~~~ 114 (245)
...+.+|+.+.|.|.+.+.| .+.+.|++.. ... ....++.+.. ......|.|.++..
T Consensus 11 ~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 90 (247)
T 2ghw_B 11 GGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRA 90 (247)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCCH
Confidence 46788999999999999877 5789999832 110 1124555544 23457899999999
Q ss_pred CCCeEEEEEEEeCCce--eEEEEEEEecCC--------------CCcccc---CccccCCCeeEEEEEeCCCCCceEEEE
Q psy12131 115 TDFGNYMCQASNNLGS--SQQFIQLSGIPN--------------IPVFQK---SSRRLGPDGYRLVWQVDTYSGIIQYLL 175 (245)
Q Consensus 115 ~d~g~y~C~~~n~~g~--~~~~~~~~~~~~--------------~p~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~ 175 (245)
+|.|.|.|.+.|..+. ......|.+... ++.+.. ......++.+.|.|.+.+.++. ...
T Consensus 91 ~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~--~v~ 168 (247)
T 2ghw_B 91 EDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRASQSVRS--NLA 168 (247)
T ss_dssp GGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEESSCCTT--CEE
T ss_pred HHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeCCCccc--eEE
Confidence 9999999999997332 112234444322 222221 1235678999999999766543 234
Q ss_pred EEEeecCCCCeEEEe-eC-----C-CCC--CCcceeeeEEEecCCCCCceEEEEEEEEecC
Q psy12131 176 KFREREELTPWRNIV-IP-----S-DGS--LAGPIYTQSYNITGLQLFTQYEASVLAKNRF 227 (245)
Q Consensus 176 ~~~~~~~~~~~~~~~-~~-----~-~~~--~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~ 227 (245)
|++... +.....+. .. . ... .........+.|.++...+.+.|.|.|.|..
T Consensus 169 W~k~~~-g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~ 228 (247)
T 2ghw_B 169 WYQQKP-GQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNW 228 (247)
T ss_dssp EEEECT-TSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSS
T ss_pred EEEECC-CCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCC
Confidence 565322 11110000 00 0 000 0001123568999999999999999999864
No 327
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.57 E-value=5.7e-14 Score=114.08 Aligned_cols=125 Identities=21% Similarity=0.330 Sum_probs=88.5
Q ss_pred ceEEEeecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCe---EEeecceEEecCCC-eEEEEEEEee-cC
Q psy12131 3 EIELLYNRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPE---VSVEKQWIHTAPDM-RAEIICNVYA-NP 77 (245)
Q Consensus 3 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~---~~~~~~~~~~~~g~-~~~l~C~~~~-~~ 77 (245)
|..+..++ +|.|.+++.+|+|.|+|.+.+..+......+.|.|..+|. +..... .+..+. .+.|.|.+.+ .|
T Consensus 425 r~~~~~~~-~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~p~i~~~~~--~~~~~~~~~~l~C~~~~~~P 501 (581)
T 3o3u_N 425 VARVLPNG-SLFLPAVGIQDEGIFRCQAMNRNGKETKSNYRVRVYQIPGKPEIVDSAS--ELTAGVPNKVGTCVSEGSYP 501 (581)
T ss_dssp TSEECTTS-CEEESSCCGGGCEEEEEEEECTTSCEEEEEEEEEEEBCCCCCEEESCCS--EECTTSCEEEEEEEEEEEBS
T ss_pred cEEEcCCc-eEEEeccccccCeEEEEEEEcCCCceeEEEEEEEEEcCCCCCEEEcCCc--ccccCCceeEEEEECCCCCC
Confidence 44454444 6999999999999999999998887447788999987443 322222 234444 4567999988 59
Q ss_pred CCeEEEEECCEEeccCC-cEEEEe------cC----ceeEEEEccCC-CCCCeEEEEEEEeCCce
Q psy12131 78 PAKVEWFRDGTAITLGG-RIDMHV------SS----EKHSLLVRHIK-DTDFGNYMCQASNNLGS 130 (245)
Q Consensus 78 ~~~~~w~~~~~~~~~~~-~~~~~~------~~----~~~~l~i~~~~-~~d~g~y~C~~~n~~g~ 130 (245)
.|.+.|++++..+.... ...+.. .. -.+.|.|..+. ..+.+.|+|.+.|..+.
T Consensus 502 ~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~g~y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~~ 566 (581)
T 3o3u_N 502 AGTLSWHLDGKPLVPNEKGVSVKEQTRRHPETGLFTLQSELMVTPARGGDPRPTFSCSFSPGLPR 566 (581)
T ss_dssp CCEEEEEETTEECCTTSTTEEEEEEEEECTTTCCEEEEEEEEECCCTTSCSCCCEEEEEECSSCS
T ss_pred CCeEEEEECCEECCCCCCeEEEEeeeEEcCCCceEEEEEEEEEEeccccCCCceEEEEEeccCCC
Confidence 99999999999886533 222211 00 13578999888 44478999999998643
No 328
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.57 E-value=8.6e-16 Score=99.06 Aligned_cols=104 Identities=25% Similarity=0.435 Sum_probs=84.8
Q ss_pred eeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCCCe-EEEEECCEEecc--CCcEEEE--ecCc--eeEEEEc
Q psy12131 38 TSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPPAK-VEWFRDGTAITL--GGRIDMH--VSSE--KHSLLVR 110 (245)
Q Consensus 38 ~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~-~~w~~~~~~~~~--~~~~~~~--~~~~--~~~l~i~ 110 (245)
..+.+.|.|..+|.+.. +....+.+|+.+.|.|.+.|.|.|. +.|++++..+.. ..++.+. .... .+.|.|.
T Consensus 3 ~~~~~~l~V~~~P~i~~-~~~~~~~~G~~v~l~C~~~g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~ 81 (122)
T 2cry_A 3 SGSSGTLTVNGPPIISS-TQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTIS 81 (122)
T ss_dssp SSCCCCCCCCSSCCEEE-ECCCCCCTTSCCCCCEEECCSSCCSEEEEESSSCEECSEEETTEEEEEEEETTEEEEEEECT
T ss_pred cceEEEEEEecCCCccC-CCeEEEecCCCEEEEEEEeecCCCcEeEEEECCEEccCCCCCCEEEEEecCCCceEEEEEEc
Confidence 35667788999999888 6677788999999999999999986 999999887764 3455542 2122 5689999
Q ss_pred cCCCCCC-eEEEEEEEeCCceeEEEEEEEecCC
Q psy12131 111 HIKDTDF-GNYMCQASNNLGSSQQFIQLSGIPN 142 (245)
Q Consensus 111 ~~~~~d~-g~y~C~~~n~~g~~~~~~~~~~~~~ 142 (245)
++...|. |.|.|.|.|..|.....+.|.+...
T Consensus 82 ~v~~~D~~G~Y~C~a~N~~G~~~~~~~l~V~~~ 114 (122)
T 2cry_A 82 NIVRADFQTIYNCTAWNSFGSDTEIIRLKEQGS 114 (122)
T ss_dssp TCCHHHHHSCEEEEEECSSCEEEEEECCCCSCS
T ss_pred CCChhhCCceEEEEEECCCCeEEEEEEEEECCC
Confidence 9999998 9999999999999988888777643
No 329
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.57 E-value=3.5e-14 Score=90.88 Aligned_cols=98 Identities=24% Similarity=0.351 Sum_probs=74.9
Q ss_pred EEEEecCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecC----ceeEEEEccCCCCCCe
Q psy12131 43 IVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSS----EKHSLLVRHIKDTDFG 118 (245)
Q Consensus 43 ~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~d~g 118 (245)
.|.|..+|.+...... .......|.|.+.|.|.|.+.|++++..+............ ..+.|.|.++...|.|
T Consensus 2 ~L~V~~pP~i~~~~~~---~~~~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 78 (118)
T 1wwc_A 2 ALTVYYPPRVVSLEEP---ELRLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNG 78 (118)
T ss_dssp --CCCCCCCCCCCCCC---CCCCEEEEEEEEECSSCCEEEEEETTEECCCSSSEEEEEEECSSEEEEEEEEESCCGGGCE
T ss_pred EEEEecCCceeccCCC---eeccceEEEEEeeeeCCCeEEEEECCEECCCCCceeEEEeccCccccEEEEECCCChhcCE
Confidence 5677788886554322 22366788999999999999999999988876654443211 3568999999999999
Q ss_pred EEEEEEEeCCceeEEEEEEEecCCC
Q psy12131 119 NYMCQASNNLGSSQQFIQLSGIPNI 143 (245)
Q Consensus 119 ~y~C~~~n~~g~~~~~~~~~~~~~~ 143 (245)
.|.|.|.|..|.....+.+.+...|
T Consensus 79 ~Y~C~a~N~~G~~~~~~~l~v~~~P 103 (118)
T 1wwc_A 79 NYTLIAKNPLGTANQTINGHFLKEP 103 (118)
T ss_dssp EEEEEEEETTEEEEEEEEECCSCCC
T ss_pred EEEEEEECCCCeEeeEEEEEEccCC
Confidence 9999999999999998888776444
No 330
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.57 E-value=1.8e-14 Score=94.46 Aligned_cols=85 Identities=16% Similarity=0.284 Sum_probs=71.6
Q ss_pred cceEEecCCCeEEEEEEEeecCCCeEEEEECC----------------------------EEe-ccCCcEEEEecCceeE
Q psy12131 56 KQWIHTAPDMRAEIICNVYANPPAKVEWFRDG----------------------------TAI-TLGGRIDMHVSSEKHS 106 (245)
Q Consensus 56 ~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~----------------------------~~~-~~~~~~~~~~~~~~~~ 106 (245)
+..+.+..|+.+.|.|.+.|.|.|.+.|++++ ..+ ....++.+...+..+.
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~s~ 104 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSI 104 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEEE
T ss_pred CCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCEEE
Confidence 45678899999999999999999999999988 443 2344566665556678
Q ss_pred EEEccCCCCCCeEEEEEEEeCCceeEEEEEEEec
Q psy12131 107 LLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGI 140 (245)
Q Consensus 107 l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~~ 140 (245)
|.|.++...|.|.|+|.|.|..|.....+.|.+.
T Consensus 105 L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 105 FTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp EECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 9999999999999999999999999888888764
No 331
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.57 E-value=6.7e-13 Score=97.10 Aligned_cols=177 Identities=12% Similarity=0.155 Sum_probs=108.3
Q ss_pred CeEEeecceEEecCCCeEEEEEEEeecC------CCeEEEEEC--CEE---ec---------cCCcEEEEecCceeEEEE
Q psy12131 50 PEVSVEKQWIHTAPDMRAEIICNVYANP------PAKVEWFRD--GTA---IT---------LGGRIDMHVSSEKHSLLV 109 (245)
Q Consensus 50 p~~~~~~~~~~~~~g~~~~l~C~~~~~~------~~~~~w~~~--~~~---~~---------~~~~~~~~~~~~~~~l~i 109 (245)
+.+...+..+.+.+|+.+.|.|.+.+.+ .+.+.|++. +.. +. ...++.+........|.|
T Consensus 6 ~~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I 85 (264)
T 2gjj_A 6 IVLTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLTI 85 (264)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEE
T ss_pred cceEecCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEEE
Confidence 4455566677889999999999998877 578999984 221 11 134566554455678999
Q ss_pred ccCCCCCCeEEEEEEEeCCcee---EEEEEEEecCC----------------CCc-cc--cCccccCCCeeEEEEEeCCC
Q psy12131 110 RHIKDTDFGNYMCQASNNLGSS---QQFIQLSGIPN----------------IPV-FQ--KSSRRLGPDGYRLVWQVDTY 167 (245)
Q Consensus 110 ~~~~~~d~g~y~C~~~n~~g~~---~~~~~~~~~~~----------------~p~-~~--~~~~~~~~~~~~l~~~~~~~ 167 (245)
.+++.+|.|.|.|.+.+..+.. ...+.+...+. ++. +. .......++.+.|.|...+.
T Consensus 86 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~ 165 (264)
T 2gjj_A 86 GSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEVVKTGASVKISCKASGY 165 (264)
T ss_dssp SSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECCCEEECTTCCEEEEEEEESS
T ss_pred CCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCEEEcCCCcEEEEEEEeCC
Confidence 9999999999999999875421 12333333220 111 11 11235678999999999665
Q ss_pred CCceEEEEEEEeec-CCCCeEEEeeCCC---------CCCC-----cceeeeEEEecCCCCCceEEEEEEEEec
Q psy12131 168 SGIIQYLLKFRERE-ELTPWRNIVIPSD---------GSLA-----GPIYTQSYNITGLQLFTQYEASVLAKNR 226 (245)
Q Consensus 168 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~---------~~~~-----~~~~~~~~~i~~l~~~~~y~~~v~a~N~ 226 (245)
++......||++.. ....+........ .... .......|.|.++...+...|.|.|.|.
T Consensus 166 ~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 166 SFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDSADYYCVRSGN 239 (264)
T ss_dssp CGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred ccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccCEEEEEEEecC
Confidence 43222445666542 1111111000000 0000 0012367999999999999999999996
No 332
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.56 E-value=2.3e-14 Score=89.41 Aligned_cols=94 Identities=20% Similarity=0.339 Sum_probs=74.9
Q ss_pred cCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeC
Q psy12131 48 YPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNN 127 (245)
Q Consensus 48 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 127 (245)
.+|.+...+....+.+|+.+.|.|.+.+ +.+.+.|++++..+....++.+...+....|.|.++..+|.|.|.|.+.|
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n- 84 (103)
T 2edf_A 7 GPAAIIKPLEDQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVEA- 84 (103)
T ss_dssp CCCCEEECCCCEEECTTSCEEECCEESS-SSCCCCEEESSCBCCCSSSEEEEEETTEEEEEESSCCTTTCSEEEEECSS-
T ss_pred CCcEEEecCCccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccCCCCEEEEECCCEEEEEECCCCcccCEEEEEEEcc-
Confidence 3666767777788999999999999987 77899999999988877788877777778999999999999999999999
Q ss_pred CceeEEEEEEEecCCCC
Q psy12131 128 LGSSQQFIQLSGIPNIP 144 (245)
Q Consensus 128 ~g~~~~~~~~~~~~~~p 144 (245)
......+.+...|.+|
T Consensus 85 -~~~~~~l~V~~~p~~~ 100 (103)
T 2edf_A 85 -SKSTASLHVEEKASGP 100 (103)
T ss_dssp -CEEEEEEEECCCSSSS
T ss_pred -CCcEEEEEEeCCCCCC
Confidence 2333344444444433
No 333
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.56 E-value=3.4e-14 Score=87.27 Aligned_cols=86 Identities=23% Similarity=0.422 Sum_probs=72.5
Q ss_pred CCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCC
Q psy12131 49 PPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNL 128 (245)
Q Consensus 49 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 128 (245)
+|.+...+....+.+|+.+.|.|.+.+.| |.+.|++++..+....++.+. ...|.|.++..+|.|.|.|.+.|..
T Consensus 9 pp~~~~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~----~~~L~i~~~~~~D~G~Y~C~a~n~~ 83 (95)
T 2ckn_A 9 PWGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVESNRTRIT----GEEVEVRDSIPADSGLYACVTSSPS 83 (95)
T ss_dssp SCCBTTBBCCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCCCSSEEEC----SSEEEESSCCGGGSEEEEEEEEETT
T ss_pred CCEEEcCcceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCCCCCEEEe----CCEEEECCCChHHCEEEEEEeccCC
Confidence 55666667778889999999999999987 899999999888766665543 4589999999999999999999999
Q ss_pred ceeEEEEEEEe
Q psy12131 129 GSSQQFIQLSG 139 (245)
Q Consensus 129 g~~~~~~~~~~ 139 (245)
|.....+.|.+
T Consensus 84 g~~~~~~~l~V 94 (95)
T 2ckn_A 84 GSDTTYFSVNV 94 (95)
T ss_dssp EEEEEEEEEEE
T ss_pred CcEEEEEEEEE
Confidence 98888777664
No 334
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=1.5e-14 Score=91.42 Aligned_cols=93 Identities=20% Similarity=0.349 Sum_probs=76.3
Q ss_pred cCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEE-EecCceeEEEEccCCCCCCeEEEEEEEe
Q psy12131 48 YPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDM-HVSSEKHSLLVRHIKDTDFGNYMCQASN 126 (245)
Q Consensus 48 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~-~~~~~~~~l~i~~~~~~d~g~y~C~~~n 126 (245)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+........ ........|.|.++..+|.|.|.|.+.|
T Consensus 8 ~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 87 (110)
T 2dm3_A 8 FRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATN 87 (110)
T ss_dssp CCCEEEECCCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEEC
T ss_pred CCCcEEeCCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEEEC
Confidence 467777777788899999999999999999999999999988776554433 3333456899999999999999999999
Q ss_pred CCceeEEEEEEEec
Q psy12131 127 NLGSSQQFIQLSGI 140 (245)
Q Consensus 127 ~~g~~~~~~~~~~~ 140 (245)
..|.....+.|.+.
T Consensus 88 ~~g~~~~~~~l~V~ 101 (110)
T 2dm3_A 88 RAGQNSFSLELVVA 101 (110)
T ss_dssp SSCEEEECCEEEEE
T ss_pred CCCEEEEEEEEEEe
Confidence 99987776666554
No 335
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.56 E-value=4.1e-14 Score=88.27 Aligned_cols=89 Identities=24% Similarity=0.385 Sum_probs=71.6
Q ss_pred EEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCC--cEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCc
Q psy12131 52 VSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGG--RIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLG 129 (245)
Q Consensus 52 ~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g 129 (245)
+...+....+.+|+.+.|.|.+.+ +.+.+.|++++..+.... ++.+...+....|.|.++..+|.|.|.|.+.| .
T Consensus 10 ~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n--~ 86 (103)
T 1x44_A 10 VTKQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTG--G 86 (103)
T ss_dssp CSBCCCCEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEETT--E
T ss_pred eeccCCCEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEEECC--C
Confidence 555666778889999999999977 678999999999988776 66777766778999999999999999999998 3
Q ss_pred eeEEEEEEEecCCC
Q psy12131 130 SSQQFIQLSGIPNI 143 (245)
Q Consensus 130 ~~~~~~~~~~~~~~ 143 (245)
.....+.+...|.|
T Consensus 87 ~~~~~l~V~~~p~p 100 (103)
T 1x44_A 87 QSSAKLSVDLKSGP 100 (103)
T ss_dssp EEEEEEEEECCCSC
T ss_pred cEEEEEEEeCCCCC
Confidence 44445555555444
No 336
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.56 E-value=2.7e-14 Score=89.26 Aligned_cols=93 Identities=15% Similarity=0.270 Sum_probs=75.0
Q ss_pred CCeEEeecce---EEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEE
Q psy12131 49 PPEVSVEKQW---IHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQAS 125 (245)
Q Consensus 49 ~p~~~~~~~~---~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 125 (245)
+|.+...+.. +.+.+|+.+.|.|.+.+.+.+ +.|++++..+....++.+...+....|.|.++..+|.|.|.|.+.
T Consensus 7 ~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 85 (104)
T 2e6p_A 7 GPVHILSPQDKVSLTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEESELLVVKMDGRKHRLILPEAKVQDSGEFECRTE 85 (104)
T ss_dssp SSCCCCBCCSCEEEEEESSSCEECCEECSSTTCC-CEEEETTEECCCBTTBEEEEETTEEEEEESSCCTTTCEEEEEECS
T ss_pred CCCEEECCCCCccEEEeCCCcEEEEEEecCCCCc-cEEeeCCEECCCCCCEEEEeCCCEEEEEECCCChhhCEEEEEEEC
Confidence 5555555554 678899999999999999888 999999999887777777777777899999999999999999999
Q ss_pred eCCceeEEEEEEEecCCCC
Q psy12131 126 NNLGSSQQFIQLSGIPNIP 144 (245)
Q Consensus 126 n~~g~~~~~~~~~~~~~~p 144 (245)
|..+ ...+.+...|.+|
T Consensus 86 n~~~--~~~l~V~~~P~pp 102 (104)
T 2e6p_A 86 GVSA--FFGVTVQDPSGPS 102 (104)
T ss_dssp SCCC--CEEEEEECCCCSS
T ss_pred CceE--EEEEEEcCCCCCc
Confidence 9744 4455555555554
No 337
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.56 E-value=1.3e-13 Score=100.26 Aligned_cols=180 Identities=12% Similarity=0.120 Sum_probs=103.7
Q ss_pred CCeEEeecceEEecCCCeEEEEEEEeecC-----CCeEEEEECC--EE---e---------ccCCcEEEEecCceeEEEE
Q psy12131 49 PPEVSVEKQWIHTAPDMRAEIICNVYANP-----PAKVEWFRDG--TA---I---------TLGGRIDMHVSSEKHSLLV 109 (245)
Q Consensus 49 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~-----~~~~~w~~~~--~~---~---------~~~~~~~~~~~~~~~~l~i 109 (245)
.+.+...+..+.+.+|+.+.|.|.+.+.+ .+.+.|++++ .. + ....++.+...+....|.|
T Consensus 34 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I 113 (252)
T 3bkj_L 34 DVLMTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRI 113 (252)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEE
T ss_pred ccEEEeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEE
Confidence 34455556677889999999999998887 5899999843 11 1 0124555555555678999
Q ss_pred ccCCCCCCeEEEEEEEeCCceeE---EEEEEEecCCCCccccC---ccccCCCeeEEEEEeCCCCCc-eEEEEEEEeec-
Q psy12131 110 RHIKDTDFGNYMCQASNNLGSSQ---QFIQLSGIPNIPVFQKS---SRRLGPDGYRLVWQVDTYSGI-IQYLLKFRERE- 181 (245)
Q Consensus 110 ~~~~~~d~g~y~C~~~n~~g~~~---~~~~~~~~~~~p~~~~~---~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~- 181 (245)
.+++.+|.|.|.|.+.|..+... ..+.+...+.+|.+... .....+..+.|.|.+.+..|. .. ..|+++..
T Consensus 114 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~-v~W~k~g~~ 192 (252)
T 3bkj_L 114 SRVEAEDLGVYYCFQASLVPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDIN-VKWKIDGSE 192 (252)
T ss_dssp SSCCGGGCEEEEEEECSBSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCE-EEEEETTEE
T ss_pred CCCCcccCEEEEEEEEcCCccEECCCEEEEEeCCCcCcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcE-EEEEECCee
Confidence 99999999999999998755221 23333332334443321 112356799999999653232 22 23455432
Q ss_pred CCCC-eEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCC
Q psy12131 182 ELTP-WRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWS 230 (245)
Q Consensus 182 ~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~ 230 (245)
.... .......... .........+.|......+...|.|.|.|.....
T Consensus 193 ~~~~~~~~~~~~~~~-~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 241 (252)
T 3bkj_L 193 RQNGVLNSWTDQDSK-DSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 241 (252)
T ss_dssp ECSSEEEEECCCCTT-TCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred cCCCeeeecCcccCC-CCCEEEEEEEEEcchhccCCCeEEEEEEeCCCCC
Confidence 0111 1111000000 0000112346666665555566666699976543
No 338
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.55 E-value=1.6e-12 Score=94.72 Aligned_cols=171 Identities=12% Similarity=0.105 Sum_probs=104.9
Q ss_pred cceEEecCCCeEEEEEEEeecC--CCeEEEEEC--CEEe-----------------ccCCcEEEEec--CceeEEEEccC
Q psy12131 56 KQWIHTAPDMRAEIICNVYANP--PAKVEWFRD--GTAI-----------------TLGGRIDMHVS--SEKHSLLVRHI 112 (245)
Q Consensus 56 ~~~~~~~~g~~~~l~C~~~~~~--~~~~~w~~~--~~~~-----------------~~~~~~~~~~~--~~~~~l~i~~~ 112 (245)
+....+.+|+.+.|.|.+.+.+ .+.+.|++. +..+ ....++.+... .....|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (256)
T 1nqb_A 7 SGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSL 86 (256)
T ss_dssp CCCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECcC
Confidence 3456788999999999998875 579999983 2211 01245555432 34678999999
Q ss_pred CCCCCeEEEEEEEeCCce-----eEEEEEEEecCCCCcccc--CccccCCCeeEEEEEeCCCCCce---EEEEEEEeecC
Q psy12131 113 KDTDFGNYMCQASNNLGS-----SQQFIQLSGIPNIPVFQK--SSRRLGPDGYRLVWQVDTYSGII---QYLLKFREREE 182 (245)
Q Consensus 113 ~~~d~g~y~C~~~n~~g~-----~~~~~~~~~~~~~p~~~~--~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~ 182 (245)
+.+|.|.|.|.+.|..|. ....+.|.+.+.+..... ......++.+.|.|.+.+.++.. ....|++...
T Consensus 87 ~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~- 165 (256)
T 1nqb_A 87 TSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKP- 165 (256)
T ss_dssp CGGGCEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECT-
T ss_pred ChhhCEEEEEEEeeccCccceeEEcCceeeeecccccEEecCcEEEEecCCcEEEEeEecCcccccccceEEEEEEECC-
Confidence 999999999999998652 122345555544332221 12356789999999997664321 1234566421
Q ss_pred CCCeEEEee-CC----C-CCCC---cceeeeEEEecCCCCCceEEEEEEEEecC
Q psy12131 183 LTPWRNIVI-PS----D-GSLA---GPIYTQSYNITGLQLFTQYEASVLAKNRF 227 (245)
Q Consensus 183 ~~~~~~~~~-~~----~-~~~~---~~~~~~~~~i~~l~~~~~y~~~v~a~N~~ 227 (245)
+.....+.. .. . .... .......+.|.++...+.+.|.|.|.|..
T Consensus 166 g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~ 219 (256)
T 1nqb_A 166 GQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHV 219 (256)
T ss_dssp TSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSS
T ss_pred CCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCC
Confidence 111110100 00 0 0000 00113578999999999999999999853
No 339
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.55 E-value=3.4e-15 Score=106.25 Aligned_cols=119 Identities=15% Similarity=0.177 Sum_probs=79.6
Q ss_pred ceEEEeccCCCCCEEEEEEEEcCCCCc-eeeEEEE--EEecCCeEEeecceEEecCCCeEEEEEEEee-cCCC-eEEEEE
Q psy12131 11 ESLDLDRVTLKLAGLYQCIASNNIGES-TSKNFIV--NVIYPPEVSVEKQWIHTAPDMRAEIICNVYA-NPPA-KVEWFR 85 (245)
Q Consensus 11 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~~l--~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~-~~~w~~ 85 (245)
+.|.|.+++.+|+|.|+|.+.+..+.. ..+.+.+ .+..+|.+...+.......|+.+.|.|.+.| .|.+ .+.|++
T Consensus 76 ~~L~I~~~~~~D~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k 155 (218)
T 2rgs_A 76 STLPIQHQDWMSGKEFKCKVNNKDLPSPIERTISKIKGLVRAPQVYILPPPAEQLSRKDVSLTCLVVGFNPGDISVEWTS 155 (218)
T ss_dssp EEEECCHHHHHTTCCEEEEEEETTCSSCEEEEECCCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEE
T ss_pred EEEEEcHHHcCCCCeEEEEEECCcCCCcceEEEeecCCCCCCCEEEEECCChHHhcCCceEEEEEEEeeeCCCcEEEEEE
Confidence 469999999999999999999986652 2333322 4456787765543333346999999999998 5665 999999
Q ss_pred CCEEeccCCcEEEE-ecCc----eeEEEEccCCCCCCeEEEEEEEeCCc
Q psy12131 86 DGTAITLGGRIDMH-VSSE----KHSLLVRHIKDTDFGNYMCQASNNLG 129 (245)
Q Consensus 86 ~~~~~~~~~~~~~~-~~~~----~~~l~i~~~~~~d~g~y~C~~~n~~g 129 (245)
++..+......... ..+. .+.|.+......|.|.|+|.+.|...
T Consensus 156 ~g~~~~~~~~~~~~~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l 204 (218)
T 2rgs_A 156 NGHTEENYKDTAPVLDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGL 204 (218)
T ss_dssp TTEEECCEEECCCEECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTS
T ss_pred CCEeccCceecccEECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCC
Confidence 99876432111111 1111 12344544444468999999999764
No 340
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.55 E-value=1.1e-13 Score=97.96 Aligned_cols=112 Identities=16% Similarity=0.250 Sum_probs=76.1
Q ss_pred cceEEecCCCeEEEEEEEeecC---CCeEEEEECC--EEe------------ccCCcEEEEecCceeEEEEccCCCCCCe
Q psy12131 56 KQWIHTAPDMRAEIICNVYANP---PAKVEWFRDG--TAI------------TLGGRIDMHVSSEKHSLLVRHIKDTDFG 118 (245)
Q Consensus 56 ~~~~~~~~g~~~~l~C~~~~~~---~~~~~w~~~~--~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g 118 (245)
+....+.+|+.+.|.|.+.+.+ .+.+.|++++ ..+ ....++.....+....|.|.++..+|.|
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 86 (212)
T 1q0x_L 7 ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEA 86 (212)
T ss_dssp CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCCE
Confidence 5567789999999999999877 4789999842 221 1134555554555678999999999999
Q ss_pred EEEEEEEeCCceeE-EEEEEEe--cC-CCCccccC---ccccCCCeeEEEEEeCCC
Q psy12131 119 NYMCQASNNLGSSQ-QFIQLSG--IP-NIPVFQKS---SRRLGPDGYRLVWQVDTY 167 (245)
Q Consensus 119 ~y~C~~~n~~g~~~-~~~~~~~--~~-~~p~~~~~---~~~~~~~~~~l~~~~~~~ 167 (245)
.|.|.+.|..+... ....+.+ .+ .+|.+... .....+..+.|.|.+.+.
T Consensus 87 ~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~ 142 (212)
T 1q0x_L 87 IYFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPSSEELSTAKATLVCTITDF 142 (212)
T ss_dssp EEEEEEECSSCEEECCCEEEEECCSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEE
T ss_pred EEEEEEecCchhhcCCCeEEEEecCCCCCCeeEEeCCCHHHccCCcEEEEEEEEEE
Confidence 99999999865321 2223333 22 34443321 123457799999999653
No 341
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.55 E-value=1.4e-13 Score=98.86 Aligned_cols=136 Identities=13% Similarity=0.137 Sum_probs=84.3
Q ss_pred cceEEEeec----ceEEEeccCCCCCEEEEEEEEcCCC-------CceeeEEEEEEe----cCCeEEeecceEEecCCCe
Q psy12131 2 KEIELLYNR----ESLDLDRVTLKLAGLYQCIASNNIG-------ESTSKNFIVNVI----YPPEVSVEKQWIHTAPDMR 66 (245)
Q Consensus 2 ~~~~~~~~~----~~L~i~~~~~~d~G~Y~C~~~~~~~-------~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~ 66 (245)
+|+.+..+. .+|.|.+++.+|+|.|.|.+.+..+ ........|.|. .+|.+...+....+..|+.
T Consensus 70 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~ 149 (232)
T 3qhz_H 70 TRLTISKDTSKSQVVLTMTNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGT 149 (232)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSCCBCCEEEEECC-------CE
T ss_pred CceEEEeccCCCEEEEEECcCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCCCCCCEEEEecccccccCCCc
Confidence 467776543 3599999999999999999997521 112334556665 3566654433344567999
Q ss_pred EEEEEEEeecCC--CeEEEEECCEEeccCCcEEEEecC----ceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEE
Q psy12131 67 AEIICNVYANPP--AKVEWFRDGTAITLGGRIDMHVSS----EKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLS 138 (245)
Q Consensus 67 ~~l~C~~~~~~~--~~~~w~~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~ 138 (245)
+.|.|.+.+.++ ..+.|++++..+............ ..+.|.|......| |.|+|.+.|..+.......+.
T Consensus 150 v~L~C~~~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~ytC~v~~~~~~~~~~~~l~ 226 (232)
T 3qhz_H 150 AALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVE 226 (232)
T ss_dssp EEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEECC
T ss_pred EEEEEEEeeEeCCCeEEEEEECCEecceeeccceeCCCCCEEEEEEEEEchhhcCC-CEEEEEEEeCCCCccEEEEeC
Confidence 999999987544 368899987532110000011111 12468888888888 999999999887665555443
No 342
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.55 E-value=4e-14 Score=103.96 Aligned_cols=128 Identities=20% Similarity=0.238 Sum_probs=85.4
Q ss_pred ceEEEe---ecceEEEeccCCCCCEEEEEEEEcCCC---CceeeEEEEEEec------CCeEEee-cceEEecCCCeEEE
Q psy12131 3 EIELLY---NRESLDLDRVTLKLAGLYQCIASNNIG---ESTSKNFIVNVIY------PPEVSVE-KQWIHTAPDMRAEI 69 (245)
Q Consensus 3 ~~~~~~---~~~~L~i~~~~~~d~G~Y~C~~~~~~~---~~~~~~~~l~v~~------~p~~~~~-~~~~~~~~g~~~~l 69 (245)
|+.+.. +..+|.|.+++.+|+|.|+|.+.+... ........|.|.. +|.+... +....+..|+.+.|
T Consensus 90 r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L 169 (270)
T 3qib_D 90 RFSAECPSNSPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVFEPSEAEISHTQKATL 169 (270)
T ss_dssp HEEEECCTTSCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEE
T ss_pred cEEEEeCCCcEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccccccCCceEEECCCccccccCCceEE
Confidence 566553 245699999999999999999996432 1123445677765 5655433 22223445999999
Q ss_pred EEEEee-cCCC-eEEEEECCEEeccCCcEEE---E-----ecC---ceeEEEEccCCCCC-CeEEEEEEEeCCce
Q psy12131 70 ICNVYA-NPPA-KVEWFRDGTAITLGGRIDM---H-----VSS---EKHSLLVRHIKDTD-FGNYMCQASNNLGS 130 (245)
Q Consensus 70 ~C~~~~-~~~~-~~~w~~~~~~~~~~~~~~~---~-----~~~---~~~~l~i~~~~~~d-~g~y~C~~~n~~g~ 130 (245)
.|.+.+ .|.+ .+.|++++..+........ . ..+ ..+.|.|......| .|.|+|.+.|....
T Consensus 170 ~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~l~ 244 (270)
T 3qib_D 170 VCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 244 (270)
T ss_dssp EEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESCTTSSSCCEEEEEEEEEEHHHHHSTTCEEEEEEEECCBC
T ss_pred EEEecceeCCCeEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEecCCC
Confidence 999988 6666 8999999988865321100 0 000 02456777776666 89999999997543
No 343
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.55 E-value=3.1e-14 Score=100.63 Aligned_cols=111 Identities=19% Similarity=0.210 Sum_probs=76.6
Q ss_pred eecceEEecCCCeEEEEEEEeecCCCeEEEEEC--CEEec------------cCCcEEEEecCceeEEEEccCCCCCCeE
Q psy12131 54 VEKQWIHTAPDMRAEIICNVYANPPAKVEWFRD--GTAIT------------LGGRIDMHVSSEKHSLLVRHIKDTDFGN 119 (245)
Q Consensus 54 ~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~--~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 119 (245)
.++ .+.+.+|+.+.|.|.+. +.+.+.|++. +.... ...++.+........|.|.+++.+|.|.
T Consensus 6 ~~~-~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 82 (211)
T 3tv3_L 6 QPP-SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEAV 82 (211)
T ss_dssp CCS-EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCEE
T ss_pred eCc-eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCEE
Confidence 344 67788999999999998 7889999983 22111 2245555555567789999999999999
Q ss_pred EEEEEEeCCc--eeEEEEEEEecC---CCCccccC---ccccCCCeeEEEEEeCCC
Q psy12131 120 YMCQASNNLG--SSQQFIQLSGIP---NIPVFQKS---SRRLGPDGYRLVWQVDTY 167 (245)
Q Consensus 120 y~C~~~n~~g--~~~~~~~~~~~~---~~p~~~~~---~~~~~~~~~~l~~~~~~~ 167 (245)
|.|.+.|..+ .......+.+.. .+|.+... .....++.+.|.|.+.+.
T Consensus 83 Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~ 138 (211)
T 3tv3_L 83 YYCGSLVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDF 138 (211)
T ss_dssp EEEEEEETTTEEEECCCEEEEECCSCCBCCEEEEECCCHHHHHTTCEEEEEEEEEE
T ss_pred EEEEEecCCCceeECCCceEEEeCCCCcCCeeEecCCchhhhcCCCeEEEEEeeee
Confidence 9999999877 233334444432 33433221 122358899999999653
No 344
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.55 E-value=1.2e-13 Score=96.21 Aligned_cols=154 Identities=12% Similarity=0.137 Sum_probs=94.9
Q ss_pred cceEEecCCCeEEEEEEEee-cCCCeEEEEECCEEec---cC---------------CcEEEEecCceeEEEEccCCCCC
Q psy12131 56 KQWIHTAPDMRAEIICNVYA-NPPAKVEWFRDGTAIT---LG---------------GRIDMHVSSEKHSLLVRHIKDTD 116 (245)
Q Consensus 56 ~~~~~~~~g~~~~l~C~~~~-~~~~~~~w~~~~~~~~---~~---------------~~~~~~~~~~~~~l~i~~~~~~d 116 (245)
+..+.+..|+.+.|.|.+.+ .+.+.+.|++++..+. .. .++.+. ....|.|.+++.+|
T Consensus 5 p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~---~~~sL~I~~v~~~D 81 (193)
T 2if7_A 5 PLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFT---QSYSLQLSNLKMED 81 (193)
T ss_dssp CEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEEC---TTCCEEECSCCGGG
T ss_pred CeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEEC---CCeEEEECCCCccc
Confidence 44667889999999999875 4457999999876442 11 122221 24689999999999
Q ss_pred CeEEEEEEEeCCceeEEEEEEEecCCC--CccccCcc-ccCCC-eeEEEEEeCCCCCceEEEEEEEeecCCCCeEEEeeC
Q psy12131 117 FGNYMCQASNNLGSSQQFIQLSGIPNI--PVFQKSSR-RLGPD-GYRLVWQVDTYSGIIQYLLKFREREELTPWRNIVIP 192 (245)
Q Consensus 117 ~g~y~C~~~n~~g~~~~~~~~~~~~~~--p~~~~~~~-~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (245)
.|.|.|.+.+..+.....+.|.+...+ |.+..... ...+. .+.|.|.+.+.+|...+. |+++.. .+ .
T Consensus 82 ~G~Y~C~~~~~~~~~~~~~~L~V~~~~~~p~i~~~~~~~~~g~~~v~L~C~~~g~~p~p~i~-W~~~g~------~l-~- 152 (193)
T 2if7_A 82 TGSYRAQISTKTSAKLSSYTLRILRQLRNIQVTNHSQLFQNMTCELHLTCSVEDADDNVSFR-WEALGN------TL-S- 152 (193)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEEECCCEEEEEEECCC---CSSEEEEEEEEEESCCTTCEEE-EEETTE------EE-E-
T ss_pred CceEEEEEEecCCCeEEEEEEEEEccCCCCeEecCceeecCCCceEEEEEEEecCCCceEEE-EEeCCE------Ec-C-
Confidence 999999999988876666666664332 33322211 12344 799999997754333333 444321 11 1
Q ss_pred CCCCCCcceeeeEEEec-CCCCCceEEEEEEEEecCCCC
Q psy12131 193 SDGSLAGPIYTQSYNIT-GLQLFTQYEASVLAKNRFGWS 230 (245)
Q Consensus 193 ~~~~~~~~~~~~~~~i~-~l~~~~~y~~~v~a~N~~G~~ 230 (245)
.. ..+.|. .....+.+.|.|.|.|.+|..
T Consensus 153 ~~---------~~l~i~~~~~~~d~G~Y~C~a~N~~g~~ 182 (193)
T 2if7_A 153 SQ---------PNLTVSWDPRISSEQDYTCIAENAVSNL 182 (193)
T ss_dssp SS---------SEEEEEECTTTCSCCEEEEEEEETTEEE
T ss_pred CC---------CeEEEEeccCcCCCCcEEEEEECCCCcc
Confidence 11 123332 223224556666699999875
No 345
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=99.55 E-value=5.6e-14 Score=111.45 Aligned_cols=215 Identities=14% Similarity=0.100 Sum_probs=128.4
Q ss_pred ccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeec----CCC--eEEEEECCEE-
Q psy12131 17 RVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYAN----PPA--KVEWFRDGTA- 89 (245)
Q Consensus 17 ~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~----~~~--~~~w~~~~~~- 89 (245)
+....+.|.|.|.+.|..+.............+|..+... ........+.|.+..... +.. .+.|...+..
T Consensus 301 ~S~s~~~Gs~~C~C~ng~~ra~~d~~~~~ct~pPsaP~nl--~~~vs~tSv~LsW~pP~~~gG~~i~~Y~V~~~~~~~~~ 378 (536)
T 3fl7_A 301 HTLPSPEGATSCECEEGFFRAPQDPASMPCTRPPSAPHYL--TAVGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPES 378 (536)
T ss_dssp SEECCCTTCSSCEECTTCBCCTTCCTTSCCBCCCCCBSCE--EEECCTTSEEEEECCBSCCCSCSCCEEEEEEEEECC-C
T ss_pred CCCCCCCCccEEEEeccccccCCCccccccccCCCcccce--EEEecCCEEEEEEeCCcCCCCCceeEEEEEEEeccCCC
Confidence 3345688999999999876532222222222344322111 122345677776664221 111 3444431110
Q ss_pred -----eccCCcEEE-EecCceeEEEEccCCCCCCeEEEEEEEeCCce-----eEEEEEEEecCCCCccccCccccCCCee
Q psy12131 90 -----ITLGGRIDM-HVSSEKHSLLVRHIKDTDFGNYMCQASNNLGS-----SQQFIQLSGIPNIPVFQKSSRRLGPDGY 158 (245)
Q Consensus 90 -----~~~~~~~~~-~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~-----~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 158 (245)
......+.. ........+.|.++.+...+.|+..|.|..|. ....+.+...+.+|..... ......++
T Consensus 379 ~~~~~c~~~~~~~~~~~~~~~ts~tI~gL~P~T~Y~frV~A~N~~G~~sps~~s~~v~v~T~~~~Ps~~~~-~~~s~tSV 457 (536)
T 3fl7_A 379 GECGPCEASVRYSEPPHGLTRTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQTEPPKVRL-EGRSTTSL 457 (536)
T ss_dssp CCEEECCTTCEESSCSSSBCSSEEEEECCCTTCEEEEEEEEECTTGGGCSCCCEEEEEEECCSCCCCEEEE-EECCC-CC
T ss_pred CcccccCCCceEEEeecCCccceeEeCCCCCCCEEEEEEEEEecCCCCCCCCccceeEEeecccCCCCCce-eeccCCeE
Confidence 001111100 01123457889999999999999999998875 2334445544555544433 45677899
Q ss_pred EEEEEeC--CCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcce
Q psy12131 159 RLVWQVD--TYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAY 236 (245)
Q Consensus 159 ~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~ 236 (245)
.|+|.++ .++++.+|.|.|+.......+..+.. . ...+.|.+|.+++.|.|+|+|.|..|.|.+|..+
T Consensus 458 ~LsW~pP~~~ng~I~~Y~V~y~~~~~~~~~~~v~~--~--------~ts~~l~gL~P~T~Y~frVrA~n~~G~Gp~S~~v 527 (536)
T 3fl7_A 458 SVSWSIPPPQQSRVWKYEVTYRKKGDSNSYNVRRT--E--------GFSVTLDDLAPDTTYLVQVQALTQEGQGAGSKVH 527 (536)
T ss_dssp EEEEECCTTTTTTCSEEEEEEEEC--CCCCEEEEE--S--------SSEEECCSCCSSCEEEEEEEEECC---CEECCCE
T ss_pred EEEEECCcCCCCcccEEEEEEEECCCCceEEEEcC--C--------CCEEEECCCCCCCEEEEEEEEEcCCcccCCCCCE
Confidence 9999983 45789999999998652223332221 1 2689999999999999999999999999999999
Q ss_pred EEecCCCC
Q psy12131 237 VFATEGAE 244 (245)
Q Consensus 237 ~~~t~~~~ 244 (245)
.++|.+.+
T Consensus 528 ~~~T~~~~ 535 (536)
T 3fl7_A 528 EFQTLSPE 535 (536)
T ss_dssp EEECCC--
T ss_pred EEEeCCCC
Confidence 99998753
No 346
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.54 E-value=7.1e-13 Score=96.61 Aligned_cols=167 Identities=16% Similarity=0.098 Sum_probs=101.5
Q ss_pred eEEecCCCeEEEEEEEeecC--CCeEEEEEC--CE---Eec-------------cCCcEEEEec--CceeEEEEccCCCC
Q psy12131 58 WIHTAPDMRAEIICNVYANP--PAKVEWFRD--GT---AIT-------------LGGRIDMHVS--SEKHSLLVRHIKDT 115 (245)
Q Consensus 58 ~~~~~~g~~~~l~C~~~~~~--~~~~~w~~~--~~---~~~-------------~~~~~~~~~~--~~~~~l~i~~~~~~ 115 (245)
...+.+|+.+.|.|.+.+.| .+.+.|++. +. .+. ...++.+... .....|.|.+++.+
T Consensus 9 ~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 88 (257)
T 1f3r_B 9 PGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQTD 88 (257)
T ss_dssp CSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCCTT
T ss_pred CccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCcc
Confidence 34688999999999999875 679999984 21 110 1245555432 44678999999999
Q ss_pred CCeEEEEEEEeCCc-------ee--EEEEEEEecCCC--------------Ccccc---CccccCCCeeEEEEEeCCCCC
Q psy12131 116 DFGNYMCQASNNLG-------SS--QQFIQLSGIPNI--------------PVFQK---SSRRLGPDGYRLVWQVDTYSG 169 (245)
Q Consensus 116 d~g~y~C~~~n~~g-------~~--~~~~~~~~~~~~--------------p~~~~---~~~~~~~~~~~l~~~~~~~~~ 169 (245)
|.|.|.|.+.|..| .. .....|.+...+ +.+.. ......++.+.|.|.+.+.++
T Consensus 89 DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~ 168 (257)
T 1f3r_B 89 DTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKGSQNIN 168 (257)
T ss_dssp CCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEECSSCCB
T ss_pred cCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEEECCcCC
Confidence 99999999999854 11 122334443221 11111 123567899999999966644
Q ss_pred ceEEEEEEEeec-CCCCeEEEeeCC-----CCCCC---cceeeeEEEecCCCCCceEEEEEEEEecC
Q psy12131 170 IIQYLLKFRERE-ELTPWRNIVIPS-----DGSLA---GPIYTQSYNITGLQLFTQYEASVLAKNRF 227 (245)
Q Consensus 170 ~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~---~~~~~~~~~i~~l~~~~~y~~~v~a~N~~ 227 (245)
. ...|++... ....+. ..... ..... .......+.|.++...+.+.|.|.|.|..
T Consensus 169 ~--~v~W~k~~~g~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 232 (257)
T 1f3r_B 169 N--YLAWYQQKLGEAPKLL-IYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNG 232 (257)
T ss_dssp T--CEEEEEECTTSCCEEE-EETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSS
T ss_pred C--cEEEEEECCCCCcEEE-EEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCC
Confidence 3 344666431 111111 00000 00000 01123578999999999999999999964
No 347
>3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB, immune system/cytokine complex; 1.90A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A* 1f42_A* 1f45_A* 3hmx_A* 3qwr_A*
Probab=99.54 E-value=7.1e-12 Score=93.37 Aligned_cols=108 Identities=14% Similarity=0.068 Sum_probs=69.4
Q ss_pred CeEEEEEEEeCCceeEEEEEE----EecCCCCccccCccccCCCeeEEEEEeCC--CCCc----eEEEEEEEeecCCCCe
Q psy12131 117 FGNYMCQASNNLGSSQQFIQL----SGIPNIPVFQKSSRRLGPDGYRLVWQVDT--YSGI----IQYLLKFREREELTPW 186 (245)
Q Consensus 117 ~g~y~C~~~n~~g~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~l~~~~~~--~~~~----~~~~~~~~~~~~~~~~ 186 (245)
...+.|.|.|..|.......+ .++|.||.............+.|+|.++. +.|. +.|.|+|+..+ ...|
T Consensus 185 ~y~~~V~A~n~lg~~s~~~~f~~~~iVkPdPP~~l~~~~~~~~~~l~vsW~~P~~~~~p~~~~~L~Y~vryr~~~-~~~~ 263 (306)
T 3d85_D 185 PIEVMVDAVHKLKYEQYTSSFFIRDIIKPDPPKNLQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKS-KREK 263 (306)
T ss_dssp CEEEEEEEEETTEEEEEEEEECHHHHBCCCCCEEEEEEEC----CEEEEEECCTTSCSCTTTSCEEEEEEEECC------
T ss_pred EEEEEEEEEccCCccccceEEEehhcEecCCCceEEEEEecCCCcEEEEEcCCCCCcCCCceeeEEEEEEEEECC-CCcc
Confidence 455789999999876665544 36788887665543223378999999843 2333 68999999865 3335
Q ss_pred EEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceE
Q psy12131 187 RNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYV 237 (245)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~ 237 (245)
........ .++.+. .+..|.|+|+|+|..|.|.+|+...
T Consensus 264 ~~~~~~~~---------ts~~l~---~~~~Y~vqVRa~~~~~~G~WSeWS~ 302 (306)
T 3d85_D 264 KDRVFTDK---------TSATVI---CRKNASISVRAQDRYYSSSWSEWAS 302 (306)
T ss_dssp -CEEEESS---------SEEEEC---CCSSCEEEEEEEESSSCCCCCCCEE
T ss_pred EEEeeccc---------cEEEEe---CCCeEEEEEEeccCCCCCCCCCCCC
Confidence 43322111 345553 4899999999999999999887644
No 348
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.54 E-value=2.2e-13 Score=95.47 Aligned_cols=164 Identities=11% Similarity=0.107 Sum_probs=95.5
Q ss_pred eEEecCCCeEEEEEEEee----cCCCeEEEEECCEEecc------------CCcEEEEecCceeEEEEccCCCCCCeEEE
Q psy12131 58 WIHTAPDMRAEIICNVYA----NPPAKVEWFRDGTAITL------------GGRIDMHVSSEKHSLLVRHIKDTDFGNYM 121 (245)
Q Consensus 58 ~~~~~~g~~~~l~C~~~~----~~~~~~~w~~~~~~~~~------------~~~~~~~~~~~~~~l~i~~~~~~d~g~y~ 121 (245)
.+.+..|+.+.|.|.+.+ .+.+.+.|++++..+.. ..+..+. ......|.|.+++.+|.|.|.
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~-~~~~~~L~I~~v~~~D~G~Y~ 81 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFD-ITNNLSIVILALRPSDEGTYE 81 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEE-STTTTEEEECSCCGGGCEEEE
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEc-cCCCcEEEEecccchhCeEEE
Confidence 356779999999999853 45679999999876521 1122221 223468999999999999999
Q ss_pred EEEEeCCcee-----EEEEEEEecCC--CCccccCccccCCCeeEEEEEeC-CCCCceEEEEEEEeec-CCCCeEEEeeC
Q psy12131 122 CQASNNLGSS-----QQFIQLSGIPN--IPVFQKSSRRLGPDGYRLVWQVD-TYSGIIQYLLKFRERE-ELTPWRNIVIP 192 (245)
Q Consensus 122 C~~~n~~g~~-----~~~~~~~~~~~--~p~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 192 (245)
|.+.|..|.. ...+.|.+.+. .|...... ...++.+.|.|.+. +.++. . ..|+++.. ....-......
T Consensus 82 C~~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~~~-~~~g~~~~l~C~~~~g~P~p-~-i~W~k~g~~l~~~~~~~~~~ 158 (201)
T 1dr9_A 82 CVVLKYEKDAFKREHLAEVTLSVKADFPTPSISDFE-IPTSNIRRIICSTSGGFPEP-H-LSWLENGEELNAINTTVSQD 158 (201)
T ss_dssp EEEEECCTTSCEEEEEEEEEEEEECCCCCCEEEEEE-CSSTTEEEEEEEEEEESSCE-E-EEEEESSCEECCSEEEEEEC
T ss_pred EEEEcCCCCccccccccEEEEEEcCCCCCCceEecc-CCCCCeEEEEEecCCccCCC-E-EEEEECCEECccccceEEec
Confidence 9999976543 34555655543 23332221 24577899999994 55443 2 33555433 11111122222
Q ss_pred CCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCC
Q psy12131 193 SDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWS 230 (245)
Q Consensus 193 ~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~ 230 (245)
.... .. ....+..+...+...|.|.|.|..|..
T Consensus 159 ~~~~---~~--~~~~~~~v~~~d~g~Y~C~a~n~~~~~ 191 (201)
T 1dr9_A 159 PETE---LY--AVSSKLDFNMTTNHSFMCLIKYGHLRV 191 (201)
T ss_dssp TTTC---CE--EEEEEEEEETTSCEEEEEEEEETTCCE
T ss_pred CCCc---EE--EEEEEEEEEecCCCEEEEEEecCccee
Confidence 1110 00 111112233345566777799998754
No 349
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.54 E-value=2.1e-13 Score=87.07 Aligned_cols=82 Identities=18% Similarity=0.205 Sum_probs=67.9
Q ss_pred cCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEec-------CceeEEEEccCCCCCCeEEEEEEEeCCceeEEE
Q psy12131 62 APDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVS-------SEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQF 134 (245)
Q Consensus 62 ~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~-------~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~ 134 (245)
..+..+.|.|.+.|.|.|.+.|+++|..+....+..+... .....|.|..+...|.|.|+|.|.|..|....+
T Consensus 13 ~~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~t 92 (126)
T 1he7_A 13 VEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASAS 92 (126)
T ss_dssp CCCCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEEE
T ss_pred ccCccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEEE
Confidence 3677899999999999999999999999987766443221 124689999999999999999999999999888
Q ss_pred EEEEecCCC
Q psy12131 135 IQLSGIPNI 143 (245)
Q Consensus 135 ~~~~~~~~~ 143 (245)
+.+.+...|
T Consensus 93 ~~l~v~~~P 101 (126)
T 1he7_A 93 IMAAFMDNP 101 (126)
T ss_dssp EEECCCSCT
T ss_pred EEEEEEcCC
Confidence 888766444
No 350
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.54 E-value=1.2e-13 Score=98.06 Aligned_cols=115 Identities=17% Similarity=0.311 Sum_probs=77.0
Q ss_pred eEEeecceEEecCCCeEEEEEEEeec-CCCeEEEEECC---EE--e----------c---cCCcEEEEecCceeEEEEcc
Q psy12131 51 EVSVEKQWIHTAPDMRAEIICNVYAN-PPAKVEWFRDG---TA--I----------T---LGGRIDMHVSSEKHSLLVRH 111 (245)
Q Consensus 51 ~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~~~w~~~~---~~--~----------~---~~~~~~~~~~~~~~~l~i~~ 111 (245)
.+..++ .+.+.+|+.+.|.|.+.+. +.+.+.|++.. .. + . ...++.+........|.|.+
T Consensus 3 ~v~~~p-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 81 (218)
T 3s96_B 3 VLTQSS-SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISN 81 (218)
T ss_dssp SEECCS-EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESS
T ss_pred eEEeCC-cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEcc
Confidence 344455 6778899999999999998 88999999821 10 0 0 11255544455567899999
Q ss_pred CCCCCCeEEEEEEEeCCc-----eeEEEEEEEec--C-CCCcccc---CccccCCCeeEEEEEeCC
Q psy12131 112 IKDTDFGNYMCQASNNLG-----SSQQFIQLSGI--P-NIPVFQK---SSRRLGPDGYRLVWQVDT 166 (245)
Q Consensus 112 ~~~~d~g~y~C~~~n~~g-----~~~~~~~~~~~--~-~~p~~~~---~~~~~~~~~~~l~~~~~~ 166 (245)
++.+|.|.|.|.+.|..| .....+.|.+. + .+|.+.. ......++.+.|.|.+.+
T Consensus 82 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C~~~g 147 (218)
T 3s96_B 82 IQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSSEELKENKATLVCLISN 147 (218)
T ss_dssp CCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCCHHHHHTTEEEEEEEEEE
T ss_pred CCcccCEEEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCCcccccCCcEEEEEEECc
Confidence 999999999999999775 22223333333 2 3343322 122344588999999965
No 351
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.54 E-value=2.3e-14 Score=86.89 Aligned_cols=79 Identities=18% Similarity=0.410 Sum_probs=65.7
Q ss_pred CCeEEeecce--EEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEe
Q psy12131 49 PPEVSVEKQW--IHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASN 126 (245)
Q Consensus 49 ~p~~~~~~~~--~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 126 (245)
||.+..++.. +.+..|+.+.|.|.+.+ |.+.+.|++++..+....++.+...+....|.|.++..+|.|.|+|.|.|
T Consensus 4 P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 82 (91)
T 2lvc_A 4 PVHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAGD 82 (91)
T ss_dssp CCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECSS
T ss_pred CcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEcc
Confidence 4555444443 34568999999999865 88899999999999988888888888888999999999999999999977
Q ss_pred CC
Q psy12131 127 NL 128 (245)
Q Consensus 127 ~~ 128 (245)
..
T Consensus 83 ~~ 84 (91)
T 2lvc_A 83 EC 84 (91)
T ss_dssp CE
T ss_pred eE
Confidence 53
No 352
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.53 E-value=5.4e-14 Score=83.92 Aligned_cols=71 Identities=23% Similarity=0.588 Sum_probs=63.0
Q ss_pred ceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCC
Q psy12131 57 QWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNL 128 (245)
Q Consensus 57 ~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 128 (245)
..+.+.+|+.+.|.|.+.+ |.|.+.|++++..+....++.+...+....|.|.++..+|.|.|+|.|.|..
T Consensus 4 t~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~ 74 (84)
T 2lu7_A 4 TRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQDS 74 (84)
T ss_dssp CCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTTTC
T ss_pred eEEEEecCCCEEEEEEECC-CCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEECCEE
Confidence 3567889999999999865 8889999999999998888888888888899999999999999999997653
No 353
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=99.53 E-value=3e-12 Score=90.70 Aligned_cols=132 Identities=19% Similarity=0.176 Sum_probs=96.0
Q ss_pred eEEEEccC-CCCCCeEEEEEEEeCCceeEE-EEEEE----ecCCCCccccCccc-cCCCeeEEEEEeC--CCCCceEEEE
Q psy12131 105 HSLLVRHI-KDTDFGNYMCQASNNLGSSQQ-FIQLS----GIPNIPVFQKSSRR-LGPDGYRLVWQVD--TYSGIIQYLL 175 (245)
Q Consensus 105 ~~l~i~~~-~~~d~g~y~C~~~n~~g~~~~-~~~~~----~~~~~p~~~~~~~~-~~~~~~~l~~~~~--~~~~~~~~~~ 175 (245)
..+.|.++ .......|++.|.|..|.... ...+. ..|.+|........ ....++.|+|.+. .++++..|.|
T Consensus 62 ~~~~i~~L~~~~t~Y~~~V~A~n~~G~~~s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v 141 (215)
T 1bqu_A 62 TSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNI 141 (215)
T ss_dssp TEEECSSCCCTTSCEEEEEEEEETTEEEECCCEEECGGGSEECCCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEE
T ss_pred ceEEEcCCccccccEEEEEEEEecccCccCCcEEecccccCcCCCCCceEEEEecCCCceEEEEEeCCCCCCcceEEEEE
Confidence 46788888 777888899999999887652 12221 34666655443221 2568999999973 2457899999
Q ss_pred EEEeecCCCCeEEEeeC--CCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCC---CCcceEEecCCCC
Q psy12131 176 KFREREELTPWRNIVIP--SDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSR---PSKAYVFATEGAE 244 (245)
Q Consensus 176 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~---~s~~~~~~t~~~~ 244 (245)
+|+... ...|..+... ... ...+.|.+|.+++.|.|+|+|.|..|.|. +|..+.++|.+.+
T Consensus 142 ~y~~~~-~~~~~~~~~~~~~~~-------~~~~~i~~L~p~t~Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~~~ 207 (215)
T 1bqu_A 142 QYRTKD-ASTWSQIPPEDTAST-------RSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDR 207 (215)
T ss_dssp EEEETT-CSSCEECCGGGGCSC-------CSEEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECCCH
T ss_pred EEccCC-CCCceEeccccccCc-------cceEEeCCCCCCCEEEEEEEEccCCCCCccCCCCCcccccccccC
Confidence 999875 5678765321 111 26899999999999999999999999855 6778888988764
No 354
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.53 E-value=1.4e-12 Score=95.66 Aligned_cols=178 Identities=10% Similarity=0.075 Sum_probs=106.4
Q ss_pred CCeEEeecceEEecCCCeEEEEEEEeecC-----CCeEEEEECC--E---Eec---------cCCcEEEEecCceeEEEE
Q psy12131 49 PPEVSVEKQWIHTAPDMRAEIICNVYANP-----PAKVEWFRDG--T---AIT---------LGGRIDMHVSSEKHSLLV 109 (245)
Q Consensus 49 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~-----~~~~~w~~~~--~---~~~---------~~~~~~~~~~~~~~~l~i 109 (245)
.+.+...+..+.+.+|+.+.|.|.+.+.+ .+.+.|++.. . .+. ...++.+...+....|.|
T Consensus 15 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I 94 (268)
T 1x9q_A 15 DVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKI 94 (268)
T ss_dssp CCCEEEECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEE
T ss_pred cceEEeeCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEE
Confidence 45555666677889999999999998876 4789999742 2 111 134566554455678999
Q ss_pred ccCCCCCCeEEEEEEEeCCce-e--EEEEEEEecCC------CCc--------------cc---cCccccCCCeeEEEEE
Q psy12131 110 RHIKDTDFGNYMCQASNNLGS-S--QQFIQLSGIPN------IPV--------------FQ---KSSRRLGPDGYRLVWQ 163 (245)
Q Consensus 110 ~~~~~~d~g~y~C~~~n~~g~-~--~~~~~~~~~~~------~p~--------------~~---~~~~~~~~~~~~l~~~ 163 (245)
.+++.+|.|.|.|.+.|..+. . ...+.+...+. ||. .. .......++.++|.|.
T Consensus 95 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~v~L~C~ 174 (268)
T 1x9q_A 95 NRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGAMKLSCV 174 (268)
T ss_dssp SSCCGGGCEEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEEEECCEEECTTCCEEEEEE
T ss_pred CCCChhHCEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCCCcEEEEEE
Confidence 999999999999999987542 1 12333332211 110 11 1234567899999999
Q ss_pred eCCCCCceEEEEEEEeec-CCCCeEEEee-----------CCCCCCCc-----ceeeeEEEecCCCCCceEEEEEEEEec
Q psy12131 164 VDTYSGIIQYLLKFRERE-ELTPWRNIVI-----------PSDGSLAG-----PIYTQSYNITGLQLFTQYEASVLAKNR 226 (245)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----------~~~~~~~~-----~~~~~~~~i~~l~~~~~y~~~v~a~N~ 226 (245)
..+..+......||+... ....+..... ........ ......+.|.++...+.+.|.|.|.|.
T Consensus 175 ~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~ 254 (268)
T 1x9q_A 175 TSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVEDTGIYYCTGASY 254 (268)
T ss_dssp EESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred ecCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEccC
Confidence 966543223345666532 1111111000 00000000 011357999999999999999999985
No 355
>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.52 E-value=1.1e-13 Score=87.31 Aligned_cols=96 Identities=19% Similarity=0.154 Sum_probs=75.1
Q ss_pred cCCCCccccCccccCCCeeEEEEEe---CCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCce
Q psy12131 140 IPNIPVFQKSSRRLGPDGYRLVWQV---DTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQ 216 (245)
Q Consensus 140 ~~~~p~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~ 216 (245)
.|.+|............++.|.|.. +++.++.+|.|+|+... ...|..+.... ...+.+.+|.+++.
T Consensus 8 ~P~~P~~~~~~~~~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~-~~~~~~~~~~~---------~~~~~v~~L~p~t~ 77 (110)
T 2crz_A 8 PPGPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIE-KDEPREVYQGS---------EVECTVSSLLPGKT 77 (110)
T ss_dssp CCCCCCCCEECSCCCSSEEEEECCCCSCCTTSCCCEEEEEEECTT-SCCCEEEEEES---------CSEEEEESCCTTCE
T ss_pred CCCCCCCceeccccCCCEEEEEeCCCCCCCCceeEEEEEEEEeCC-CCceEEEEeCC---------cEEEEECCcCCCCE
Confidence 4555554443233566799999975 34578999999998764 56787665322 26799999999999
Q ss_pred EEEEEEEEecCCCCCCCcceEEecCCCCC
Q psy12131 217 YEASVLAKNRFGWSRPSKAYVFATEGAET 245 (245)
Q Consensus 217 y~~~v~a~N~~G~~~~s~~~~~~t~~~~~ 245 (245)
|.|||.|.|..|.|.+|..+.+.|.+++|
T Consensus 78 Y~frV~A~n~~G~g~~S~~~~~~T~~~~P 106 (110)
T 2crz_A 78 YSFRLRAANKMGFGPFSEKCDITTAPGSG 106 (110)
T ss_dssp EEECCEEECSSCBCCCCCCEEEECCCSCC
T ss_pred EEEEEEEEcCCccCCCCCccccccCCCCC
Confidence 99999999999999999999999988765
No 356
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.52 E-value=3.4e-13 Score=95.66 Aligned_cols=172 Identities=10% Similarity=0.092 Sum_probs=97.9
Q ss_pred cceEEecCCCeEEEEEEEeecC--CCeEEEEECC--EEe------------ccCCcEEEEecCceeEEEEccCCCCCCeE
Q psy12131 56 KQWIHTAPDMRAEIICNVYANP--PAKVEWFRDG--TAI------------TLGGRIDMHVSSEKHSLLVRHIKDTDFGN 119 (245)
Q Consensus 56 ~~~~~~~~g~~~~l~C~~~~~~--~~~~~w~~~~--~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 119 (245)
|....+.+|+.+.|.|.+.+.+ .+.+.|++++ ... ....++.+...+....|.|.++..+|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 86 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEAD 86 (216)
T ss_dssp CSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEE
Confidence 4557788999999999954333 5789999843 111 01235555545566789999999999999
Q ss_pred EEEEEEeCCc--ee--EEEEEEEecCCCCccccCc---cccCCCeeEEEEEeCCCCCc-eEEEEEEEeec-CCCC-eEEE
Q psy12131 120 YMCQASNNLG--SS--QQFIQLSGIPNIPVFQKSS---RRLGPDGYRLVWQVDTYSGI-IQYLLKFRERE-ELTP-WRNI 189 (245)
Q Consensus 120 y~C~~~n~~g--~~--~~~~~~~~~~~~p~~~~~~---~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~-~~~~-~~~~ 189 (245)
|.|.+.|..+ .. ...+.+...+.+|.+.... ....+..+.|.|.+.+..|. .. ..|+++.. .... ....
T Consensus 87 Y~C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~-v~W~k~g~~~~~~~~~~~ 165 (216)
T 2xzc_L 87 YYCGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAK-VQWKVDNALQSGNSQESV 165 (216)
T ss_dssp EEEEEECTTSCEEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCE-EEEEETTEECCSSEEEEE
T ss_pred EEEEEEeCCCcceECCCEEEEEcCCCCCCceEEeCCChhhccCCcEEEEEEEEeEcCCceE-EEEEECCeecCCCeeEec
Confidence 9999999875 11 1233333333345433211 12347799999999653222 22 23555433 1111 1111
Q ss_pred eeCCCCCCCcc-eeeeEEEecCCCCCceEEEEEEEEecCCCC
Q psy12131 190 VIPSDGSLAGP-IYTQSYNITGLQLFTQYEASVLAKNRFGWS 230 (245)
Q Consensus 190 ~~~~~~~~~~~-~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~ 230 (245)
...... ... .....+.|......+...|.|.|.|.....
T Consensus 166 ~~~~~~--~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 205 (216)
T 2xzc_L 166 TEQDSK--DSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSS 205 (216)
T ss_dssp CCCCTT--TCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSS
T ss_pred CcccCC--CCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCC
Confidence 111110 011 112256666655555556666699987543
No 357
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.52 E-value=9.7e-14 Score=101.93 Aligned_cols=141 Identities=15% Similarity=0.068 Sum_probs=71.0
Q ss_pred cCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEEC--CEE---e--
Q psy12131 18 VTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRD--GTA---I-- 90 (245)
Q Consensus 18 ~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~--~~~---~-- 90 (245)
.++.|.+.|.|.+.+..|.. ..... ..+...+..+.+.+|+.+.|.|.+.+ +.+.+.|++. +.. +
T Consensus 3 ~~~~~~~~y~~~~~~~~g~~-~~~~~------~~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~ 74 (270)
T 3qib_D 3 NERADLIAYLKQATKGGGGS-GGGGG------MKVIQTPRYLVKGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEFKFLIN 74 (270)
T ss_dssp --------------------------------CCCEEECSEEEEETTSCEEEEEECCT-TCCEEEEEEECTTCCEEEEEE
T ss_pred chhhhHHHHHHHHhccCCcc-ccccc------eeEEeCCCeEEEcCCCCEEEEEEecC-CCceEEEEEECCCCCcEEEEE
Confidence 46789999999999877652 22222 23344555677889999999999864 6789999982 111 0
Q ss_pred -------ccC---C-cEEEEe-cCceeEEEEccCCCCCCeEEEEEEEeCCc----eeEE--EEEEEec---CCCCccccC
Q psy12131 91 -------TLG---G-RIDMHV-SSEKHSLLVRHIKDTDFGNYMCQASNNLG----SSQQ--FIQLSGI---PNIPVFQKS 149 (245)
Q Consensus 91 -------~~~---~-~~~~~~-~~~~~~l~i~~~~~~d~g~y~C~~~n~~g----~~~~--~~~~~~~---~~~p~~~~~ 149 (245)
... . ++.+.. ......|.|.+++.+|.|.|.|.+.+..+ .... .+.+... +.+|.....
T Consensus 75 ~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~ 154 (270)
T 3qib_D 75 FQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVF 154 (270)
T ss_dssp EETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEEE
T ss_pred ECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccccccCCceEEE
Confidence 000 0 444332 23467899999999999999999996432 1112 3333321 113332211
Q ss_pred -c---cccCCCeeEEEEEeCC
Q psy12131 150 -S---RRLGPDGYRLVWQVDT 166 (245)
Q Consensus 150 -~---~~~~~~~~~l~~~~~~ 166 (245)
. ....+..+.|.|.+.+
T Consensus 155 ~~~~~~~~~g~~v~L~C~~~g 175 (270)
T 3qib_D 155 EPSEAEISHTQKATLVCLATG 175 (270)
T ss_dssp ECCHHHHHHHSEEEEEEEEEE
T ss_pred CCCccccccCCceEEEEEecc
Confidence 1 1234789999999966
No 358
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.52 E-value=3.9e-14 Score=106.76 Aligned_cols=119 Identities=14% Similarity=0.152 Sum_probs=82.3
Q ss_pred ceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEE----EecCCeEEeecceEEecCCCeEEEEEEEeec-CCC-eEEEE
Q psy12131 11 ESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVN----VIYPPEVSVEKQWIHTAPDMRAEIICNVYAN-PPA-KVEWF 84 (245)
Q Consensus 11 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~----v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~~~w~ 84 (245)
+.|.|.+++.+|+|.|+|.|.|..+. ......+. +..+|.+...+.......|+.+.|.|.+.|. |.+ .+.|+
T Consensus 178 ~~L~I~~~~~~D~G~Y~C~a~n~~~~-~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~ 256 (323)
T 2wqr_A 178 STLPVGTRDWIEGETYQCRVTHPHLP-RALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLIQNFMPEDISVQWL 256 (323)
T ss_dssp EEEECCHHHHHTTCCEEEEEECTTSS-SCEEEEECCCCSCCBCCEEEEEECCCCTTCTTEEEEEEEEEEEBSSCCEEEEE
T ss_pred EEEEECHHHccCCCCEEEEEECCCCC-CCeeeEEEccCCCCCCCEEEEeCCChHHhcCCcEEEEEEeeeeeCCCcEEEEE
Confidence 36999999999999999999997643 22233332 2256776554332223349999999999984 433 89999
Q ss_pred ECCEEeccCCcEE---EEe-cC---ceeEEEEccCCCCCCeEEEEEEEeCCce
Q psy12131 85 RDGTAITLGGRID---MHV-SS---EKHSLLVRHIKDTDFGNYMCQASNNLGS 130 (245)
Q Consensus 85 ~~~~~~~~~~~~~---~~~-~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~ 130 (245)
+++..+....... ... ++ ..+.|.|..+..+|.|.|+|.|.|....
T Consensus 257 k~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 257 HNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp ETTEECCGGGEEECCCEECSSSSEEEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred ECCEECCCCceeecCcccCCCCcEEEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 9999876432110 011 11 1357889988888999999999998765
No 359
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.52 E-value=9e-13 Score=95.47 Aligned_cols=176 Identities=14% Similarity=0.138 Sum_probs=95.8
Q ss_pred cceEEecCCCeEEEEEEEeecCCCe-----EEEEECCEEecc--------CCcEEEE----------ecCceeEEEEccC
Q psy12131 56 KQWIHTAPDMRAEIICNVYANPPAK-----VEWFRDGTAITL--------GGRIDMH----------VSSEKHSLLVRHI 112 (245)
Q Consensus 56 ~~~~~~~~g~~~~l~C~~~~~~~~~-----~~w~~~~~~~~~--------~~~~~~~----------~~~~~~~l~i~~~ 112 (245)
+....+..|+.+.|.|.+.+.|.+. +.|+++...... ....... .......|.|.++
T Consensus 10 p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v 89 (248)
T 3pv7_A 10 GGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPGI 89 (248)
T ss_dssp TSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESSC
T ss_pred CCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCCC
Confidence 3455678999999999999887765 999985321110 0000000 0112346999999
Q ss_pred CCCCCeEEEEEEEeCCceeEEEEEEEecCCCCcccc-CccccCCCeeEEEEEeCC-CCCceEEEEEEEeecC--------
Q psy12131 113 KDTDFGNYMCQASNNLGSSQQFIQLSGIPNIPVFQK-SSRRLGPDGYRLVWQVDT-YSGIIQYLLKFREREE-------- 182 (245)
Q Consensus 113 ~~~d~g~y~C~~~n~~g~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~-------- 182 (245)
+.+|.|.|.|.+.+..+.....+.|.+...|..... ......+..+.|.|.+.+ .++...+ .|+++...
T Consensus 90 ~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~P~v~~~~~~~~~~~~~~~L~C~~~g~~P~pi~v-~W~k~g~~l~~~~~~~ 168 (248)
T 3pv7_A 90 QLEEAGEYRCEVVVTPLKAQGTVQLEVVASPASRLLLDQVGMKENEDKYMCESSGFYPEAINI-TWEKQTQKFPHPIEIS 168 (248)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEEEEEBCCEEEEECC--------CEEEEEEEEEBSSCCEE-EEEEECSSSCSCEEEC
T ss_pred CHHHCeEEEEEEEeCCccceeEEEEEEecCCceEEecCCccccCCCcEEEEEEccEECCCeEE-EEEECCccCCCccccc
Confidence 999999999999998887777777766543222111 122345677889999966 3332123 35554320
Q ss_pred CCCe-EEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcc
Q psy12131 183 LTPW-RNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKA 235 (245)
Q Consensus 183 ~~~~-~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~ 235 (245)
.... ......... .......+.+......+...|.|.|.|..+....+..
T Consensus 169 ~~~~~~~~~~~~~~---~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~ 219 (248)
T 3pv7_A 169 EDVITGPTIKNMDG---TFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSN 219 (248)
T ss_dssp TTEEEEEEEECTTS---CEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEE
T ss_pred cceeecccEECCCC---CEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEE
Confidence 0000 111111111 1111234555555555555666669999887555443
No 360
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.52 E-value=1.8e-13 Score=100.95 Aligned_cols=129 Identities=18% Similarity=0.252 Sum_probs=83.8
Q ss_pred cceEEEee---cceEEEeccCCCCCEEEEEEEEcCCC----C-ceeeEEEEEEec------CCeEEee-cceEEecCCCe
Q psy12131 2 KEIELLYN---RESLDLDRVTLKLAGLYQCIASNNIG----E-STSKNFIVNVIY------PPEVSVE-KQWIHTAPDMR 66 (245)
Q Consensus 2 ~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~~~~~~~----~-~~~~~~~l~v~~------~p~~~~~-~~~~~~~~g~~ 66 (245)
+|+.+..+ ..+|.|.+++.+|+|.|+|.+.+..+ . .....+.|.|.. +|.+... +....+..|+.
T Consensus 88 ~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~ 167 (279)
T 2wbj_D 88 DKFLINHASLTLSTLTVTSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQK 167 (279)
T ss_dssp SSEEEEECSSSEEEEEESSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSC
T ss_pred CcEEEEeCCCCEEEEEEccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCc
Confidence 46666642 34799999999999999999998432 1 012335677764 5655443 22223346899
Q ss_pred EEEEEEEeec-CC-CeEEEEECCEEeccCCcEE---EE----ecCc----eeEEEEccCCCCC-CeEEEEEEEeCCce
Q psy12131 67 AEIICNVYAN-PP-AKVEWFRDGTAITLGGRID---MH----VSSE----KHSLLVRHIKDTD-FGNYMCQASNNLGS 130 (245)
Q Consensus 67 ~~l~C~~~~~-~~-~~~~w~~~~~~~~~~~~~~---~~----~~~~----~~~l~i~~~~~~d-~g~y~C~~~n~~g~ 130 (245)
+.|.|.+.+. |. +.+.|++++..+....... .. .... .+.|.|......| .+.|+|.+.|....
T Consensus 168 v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~n~~~~ 245 (279)
T 2wbj_D 168 ATLVCLATGFYPDHVELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 245 (279)
T ss_dssp CEEEEEEEEEBSSCEEEEEEETTEECCTTEEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEEECCBC
T ss_pred eEEEEEEeeEcCCCcEEEEEECCEECCCCcccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEEEeCCCC
Confidence 9999999986 43 6999999998875432110 00 0111 2347777666544 67899999997643
No 361
>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.51 E-value=9.4e-14 Score=87.59 Aligned_cols=94 Identities=22% Similarity=0.337 Sum_probs=72.6
Q ss_pred CCCCccccCccccCCCeeEEEEEeCC--CCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEE
Q psy12131 141 PNIPVFQKSSRRLGPDGYRLVWQVDT--YSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYE 218 (245)
Q Consensus 141 ~~~p~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~ 218 (245)
|.+|...........+++.|.|.+.. +.++.+|.|+|+... ...|..+..... ..+.+.+|.+++.|.
T Consensus 10 P~~P~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~-~~~~~~~~~~~~---------~~~~v~~L~p~t~Y~ 79 (110)
T 2db8_A 10 PATPILQLEECCTHNNSATLSWKQPPLSTVPADGYILELDDGN-GGQFREVYVGKE---------TMCTVDGLHFNSTYN 79 (110)
T ss_dssp CCCCBCCCCCCSCSSSEEEECCBCCTTCCSCCSEEEEEECCSS-SSCCEEEEEESC---------SCEEEECCCSSSCCE
T ss_pred CCCccccceeeccCCCEEEEEECCCCCCCCCccEEEEEEEeCC-CCceEEEEeCCc---------CEEEECCCCCCCEEE
Confidence 33443333333346789999999833 368899999998864 567876653222 578999999999999
Q ss_pred EEEEEEecCCCCCCCcceEEecCCCC
Q psy12131 219 ASVLAKNRFGWSRPSKAYVFATEGAE 244 (245)
Q Consensus 219 ~~v~a~N~~G~~~~s~~~~~~t~~~~ 244 (245)
|||.|.|..|.|.+|..+.++|.+.+
T Consensus 80 frV~A~n~~G~s~~S~~~~~~T~~~p 105 (110)
T 2db8_A 80 ARVKAFNKTGVSPYSKTLVLQTSEGS 105 (110)
T ss_dssp EEEEEECSSCBCCCCSCEECCCCCCC
T ss_pred EEEEEEeCCcCCCCCCCEEEEcCCCC
Confidence 99999999999999999999998865
No 362
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.51 E-value=4.6e-12 Score=92.03 Aligned_cols=173 Identities=9% Similarity=0.074 Sum_probs=103.5
Q ss_pred ecceEEecCCCeEEEEEEEeecC--CCeEEEEEC--CEE---e--------------ccCCcEEEEec--CceeEEEEcc
Q psy12131 55 EKQWIHTAPDMRAEIICNVYANP--PAKVEWFRD--GTA---I--------------TLGGRIDMHVS--SEKHSLLVRH 111 (245)
Q Consensus 55 ~~~~~~~~~g~~~~l~C~~~~~~--~~~~~w~~~--~~~---~--------------~~~~~~~~~~~--~~~~~l~i~~ 111 (245)
.+..+.+.+|+.+.|.|.+.+.+ .+.+.|++. +.. + ....++.+... .....|.|.+
T Consensus 7 ~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 86 (253)
T 3uzq_A 7 QSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLSS 86 (253)
T ss_dssp ECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECS
T ss_pred cCCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeCC
Confidence 44566788999999999998754 678999982 211 1 11234554432 3356799999
Q ss_pred CCCCCCeEEEEEEEeCCcee-EEEEEEEecCC--------------CCccccC---ccccCCCeeEEEEEeCCCCCc--e
Q psy12131 112 IKDTDFGNYMCQASNNLGSS-QQFIQLSGIPN--------------IPVFQKS---SRRLGPDGYRLVWQVDTYSGI--I 171 (245)
Q Consensus 112 ~~~~d~g~y~C~~~n~~g~~-~~~~~~~~~~~--------------~p~~~~~---~~~~~~~~~~l~~~~~~~~~~--~ 171 (245)
++.+|.|.|.|.+.|..+.. .....+.+... ++.+... .....++.+.|.|...+.++. .
T Consensus 87 v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~ 166 (253)
T 3uzq_A 87 LTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRASENVDRYGN 166 (253)
T ss_dssp CCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEESSCCEETTE
T ss_pred CCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEecCccccCCC
Confidence 99999999999999865443 22333343321 2222211 335779999999999765432 0
Q ss_pred EEEEEEEeecCCCCeEEEeeCCC------CCCC---cceeeeEEEecCCCCCceEEEEEEEEecCC
Q psy12131 172 QYLLKFREREELTPWRNIVIPSD------GSLA---GPIYTQSYNITGLQLFTQYEASVLAKNRFG 228 (245)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~---~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G 228 (245)
....||+... +..-..+..... .... .......+.|.++...+.+.|.|.|.|..+
T Consensus 167 ~~v~W~r~~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~ 231 (253)
T 3uzq_A 167 SFMHWYQQKA-GQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVP 231 (253)
T ss_dssp ECEEEEEECT-TSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSS
T ss_pred cEEEEEEECC-CCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCC
Confidence 1344666432 111110100000 0000 001125699999999999999999999754
No 363
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.51 E-value=7.8e-12 Score=91.03 Aligned_cols=170 Identities=13% Similarity=0.112 Sum_probs=99.6
Q ss_pred cceEEecCCCeEEEEEEEeec--CCCeEEEEECC--E---Ee-------------ccCCcEEEEe--cCceeEEEEccCC
Q psy12131 56 KQWIHTAPDMRAEIICNVYAN--PPAKVEWFRDG--T---AI-------------TLGGRIDMHV--SSEKHSLLVRHIK 113 (245)
Q Consensus 56 ~~~~~~~~g~~~~l~C~~~~~--~~~~~~w~~~~--~---~~-------------~~~~~~~~~~--~~~~~~l~i~~~~ 113 (245)
+....+.+|+.+.|.|.+.+. +.+.+.|++.. . .+ ....++.+.. ......|.|.+++
T Consensus 15 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 94 (257)
T 3gkz_A 15 SGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLKSVS 94 (257)
T ss_dssp ECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEECCCC
Confidence 334558899999999999984 46799999821 1 11 0123454443 2345689999999
Q ss_pred CCCCeEEEEEEEeCC----ceeEEEEEEEecCC-------------CCccccC---ccccCCCeeEEEEEeCCCCCceEE
Q psy12131 114 DTDFGNYMCQASNNL----GSSQQFIQLSGIPN-------------IPVFQKS---SRRLGPDGYRLVWQVDTYSGIIQY 173 (245)
Q Consensus 114 ~~d~g~y~C~~~n~~----g~~~~~~~~~~~~~-------------~p~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~ 173 (245)
.+|.|.|.|.+.|.. ........+.+... ++.+... .....++.+.|.|...+.++.. .
T Consensus 95 ~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~-~ 173 (257)
T 3gkz_A 95 SEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSASSSVSSS-H 173 (257)
T ss_dssp GGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEEESSCCCGG-G
T ss_pred hhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEEEccCccce-E
Confidence 999999999999962 11222233333322 2222221 2356789999999996654321 2
Q ss_pred EEEEEeecCCCCeEEEeeCCC------CCCC---cceeeeEEEecCCCCCceEEEEEEEEecC
Q psy12131 174 LLKFREREELTPWRNIVIPSD------GSLA---GPIYTQSYNITGLQLFTQYEASVLAKNRF 227 (245)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~------~~~~---~~~~~~~~~i~~l~~~~~y~~~v~a~N~~ 227 (245)
..|++... +.....+..... .... .......+.|.++...+.+.|.|.|.|..
T Consensus 174 v~W~k~~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~ 235 (257)
T 3gkz_A 174 LYWYQQKP-GSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSF 235 (257)
T ss_dssp EEEEEECT-TSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSS
T ss_pred EEEEEECC-CCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEEEEccCC
Confidence 33555432 111111110000 0000 00112569999999999999999998854
No 364
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.51 E-value=2.5e-14 Score=102.74 Aligned_cols=180 Identities=11% Similarity=0.110 Sum_probs=83.7
Q ss_pred CeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECC--EEe---c---------cCCcEEEEecCceeEEEEccCCCC
Q psy12131 50 PEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDG--TAI---T---------LGGRIDMHVSSEKHSLLVRHIKDT 115 (245)
Q Consensus 50 p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~--~~~---~---------~~~~~~~~~~~~~~~l~i~~~~~~ 115 (245)
+.+...+..+.+.+|+++.|.|.+.+.+.+.+.|+++. ... . ...++.....+....|.|.+++.+
T Consensus 24 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 103 (233)
T 3bqu_C 24 TTVTQSPASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLSE 103 (233)
T ss_dssp CCEEEECSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----CC
T ss_pred eeEEEcCCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCHH
Confidence 44445566677889999999999998888899999843 111 0 012332222233457999999999
Q ss_pred CCeEEEEEEEeCCceeE---EEEEEEecCCCCccccC---ccccCCCeeEEEEEeCCCCCceEEEEEEEeec-CCCC-eE
Q psy12131 116 DFGNYMCQASNNLGSSQ---QFIQLSGIPNIPVFQKS---SRRLGPDGYRLVWQVDTYSGIIQYLLKFRERE-ELTP-WR 187 (245)
Q Consensus 116 d~g~y~C~~~n~~g~~~---~~~~~~~~~~~p~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~-~~ 187 (245)
|.|.|.|.+.|..+... ..+.+...+.+|.+... .....+..+.|.|.+.+..|...-..|+++.. .... ..
T Consensus 104 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~ 183 (233)
T 3bqu_C 104 DVADYYCLQSDNLPYTFGGGTNLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLN 183 (233)
T ss_dssp CCSEEEEEECSSSSCCBCCCCBC---CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----CCEEE
T ss_pred HCEEEEEEEecCCceeecCCEEEEEeCCCCCCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEEEECCeeCCCCceE
Confidence 99999999998765321 12333333334443321 12235789999999965433211233555433 1111 11
Q ss_pred EEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCC
Q psy12131 188 NIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWS 230 (245)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~ 230 (245)
........ .........+.|......+...|.|.|.|.....
T Consensus 184 ~~~~~~~~-~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 225 (233)
T 3bqu_C 184 SWTDQDSK-DSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 225 (233)
T ss_dssp EECCCCTT-TCCEEEEEEEEEEHHHHHTCCCEEEEEEEC---C
T ss_pred ecCCccCC-CCCEEEEEEEEECHHHhCCCCCEEEEEEeCCCCc
Confidence 11111000 0000112345565554434445555599986544
No 365
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=99.51 E-value=7.8e-12 Score=92.64 Aligned_cols=214 Identities=13% Similarity=0.091 Sum_probs=128.4
Q ss_pred EEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCe-EEeecceEE-ecCCCeEEEEEEEeecCCC--eEEEEECCEE
Q psy12131 14 DLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPE-VSVEKQWIH-TAPDMRAEIICNVYANPPA--KVEWFRDGTA 89 (245)
Q Consensus 14 ~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~-~~~~~~~~~-~~~g~~~~l~C~~~~~~~~--~~~w~~~~~~ 89 (245)
.+..+.......+++.|.|..|..... .+.+..... ...++..+. ......+.|.+.....+.. .+.|...+..
T Consensus 64 ~~~~l~p~t~Y~~~V~A~n~~G~s~~s--~~~~~~~~~~~~~p~~~~~~~~~~~si~l~W~~p~~~i~~Y~v~~~~~~~~ 141 (290)
T 3l5i_A 64 KLTVNLTNDRYLATLTVRNLVGKSDAA--VLTIPACDFQATHPVMDLKAFPKDNMLWVEWTTPRESVKKYILEWCVLSDK 141 (290)
T ss_dssp EEEEEECSSCEEEEEEEEESSCBCCCE--EEEECCTTCCCCCCCEEEEEEEETTEEEEEEECCSSCCCEEEEEEEEECSS
T ss_pred EEEEEcCCceEEEEEEEEcCCCCCCCc--eEEeecccccCCCccceeEEEeCCCeEEEEEeCCCCCCCcEEEEEEECCCC
Confidence 455566666677778888887764333 233322100 001111111 1113466666654322111 3555543221
Q ss_pred eccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEE-EEEEEec---CC-CCccccCccccCCCeeEEEEEe
Q psy12131 90 ITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQ-FIQLSGI---PN-IPVFQKSSRRLGPDGYRLVWQV 164 (245)
Q Consensus 90 ~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~-~~~~~~~---~~-~p~~~~~~~~~~~~~~~l~~~~ 164 (245)
.................+.+.++.+.....++..|.|..|.... .+..... |. +|... .......++.|+|.+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~g~g~~~~~~~~t~~~~P~~~p~~~--~~~~~~~sv~l~W~~ 219 (290)
T 3l5i_A 142 APCITDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADGPGSPESIKAYLKQAPPSKGPTVR--TKKVGKNEAVLEWDQ 219 (290)
T ss_dssp SCCCCEEEEEETTCSEEECCSCCCTTCEEEEEEEEEETTEECCCEEEEEESSCCCCSSCCCEE--EEEECSSCEEEEECC
T ss_pred CCCCcCeEEccCCCcceEEecCcCCccEEEEEEEEEeCCcccccEEEEeEccccCCCCCCeee--EeeccCCEEEEEEcC
Confidence 11111222223334556777889988888899999998875442 3333322 22 22222 234667899999994
Q ss_pred ----CCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceEEec
Q psy12131 165 ----DTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYVFAT 240 (245)
Q Consensus 165 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~~t 240 (245)
..++++.+|.|.|+... ..|......... ..+.+.+|.+++.|.|+|.|.|..| |..|..+.++|
T Consensus 220 ~~~~~~~g~i~~Y~v~~~~~~--~~~~~~~~~~~~--------~~~~~~~L~p~t~Y~~~V~A~n~~G-g~~s~~~~~~T 288 (290)
T 3l5i_A 220 LPVDVQNGFIRNYTIFYRTII--GNETAVNVDSSH--------TEYTLSSLTSDTLYMVRMAAYTDEG-GKDGPEFTFTT 288 (290)
T ss_dssp CCHHHHSSCCCEEEEEEEETT--SCCEEEEEETTC--------SEEEECSCCTTCEEEEEEEEEETTE-EEECCCEEEEC
T ss_pred CChhccCCEEEEEEEEEEeCC--CCeEEEEeCCCc--------eEEEeCCCCCCCEEEEEEEEEeCCC-CCCCCceEeec
Confidence 34678999999999854 445544443333 6899999999999999999999999 88999999998
Q ss_pred CC
Q psy12131 241 EG 242 (245)
Q Consensus 241 ~~ 242 (245)
++
T Consensus 289 ~~ 290 (290)
T 3l5i_A 289 PK 290 (290)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 366
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.51 E-value=1.6e-14 Score=92.09 Aligned_cols=101 Identities=18% Similarity=0.193 Sum_probs=76.5
Q ss_pred EEEEEecCC-eEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEE-ecCceeEEEEccCCCCCCeE
Q psy12131 42 FIVNVIYPP-EVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMH-VSSEKHSLLVRHIKDTDFGN 119 (245)
Q Consensus 42 ~~l~v~~~p-~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~d~g~ 119 (245)
+.|.|..+| .+...+....+.+|+.+.|.|.+.+.|.|.+.|++++..+....++.+. ..+....|.|.++..+|.|.
T Consensus 5 a~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 84 (115)
T 2cr6_A 5 SSGLVQGRRVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKDSGT 84 (115)
T ss_dssp CCCCCCSSCCEEEECCCEEEEETTSCEECCCEEESTTCCSCEEEESSCEECCSSSCCBCCBTTTBCCBEECSCCTTTCEE
T ss_pred EEEEEcCCCCeEeccCccEEEeCCCcEEEEEEEcCCCCCccEEEECCEECCCCCcEEEEEcCCCEEEEEEcCCChhhCEE
Confidence 445666655 6666777888999999999999999999999999999988877666554 33556689999999999999
Q ss_pred EEEEEEeCCceeEEEEEEEecCCCCcc
Q psy12131 120 YMCQASNNLGSSQQFIQLSGIPNIPVF 146 (245)
Q Consensus 120 y~C~~~n~~g~~~~~~~~~~~~~~p~~ 146 (245)
|.|.+ |.....+.|.+...|..+
T Consensus 85 Y~C~~----g~~~~~~~L~V~~~p~~~ 107 (115)
T 2cr6_A 85 IYFEA----GDQRASAALRVTEKPSVF 107 (115)
T ss_dssp EEEEE----TTEECCEEEEEECCSSCC
T ss_pred EEEEE----CCeeEEEEEEEECCCcee
Confidence 99993 334444555555444433
No 367
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.51 E-value=2.4e-12 Score=93.73 Aligned_cols=177 Identities=10% Similarity=0.056 Sum_probs=105.7
Q ss_pred CCeEEeecceEEecCCCeEEEEEEEeec--CCCeEEEEECC--EE---e--------------ccCCcEEEEe--cCcee
Q psy12131 49 PPEVSVEKQWIHTAPDMRAEIICNVYAN--PPAKVEWFRDG--TA---I--------------TLGGRIDMHV--SSEKH 105 (245)
Q Consensus 49 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~--~~~~~~w~~~~--~~---~--------------~~~~~~~~~~--~~~~~ 105 (245)
+|.+...+..+.+.+|+.+.|.|.+.+. +.+.+.|++.. .. + ....++.+.. .....
T Consensus 6 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 85 (256)
T 3juy_B 6 HQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTA 85 (256)
T ss_dssp -CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEE
T ss_pred ceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCEE
Confidence 4556666778889999999999999873 56789999721 11 0 0123555542 34456
Q ss_pred EEEEccCCCCCCeEEEEEEEeC------------CceeEEEEEEEecCC--------------CCcccc---CccccCCC
Q psy12131 106 SLLVRHIKDTDFGNYMCQASNN------------LGSSQQFIQLSGIPN--------------IPVFQK---SSRRLGPD 156 (245)
Q Consensus 106 ~l~i~~~~~~d~g~y~C~~~n~------------~g~~~~~~~~~~~~~--------------~p~~~~---~~~~~~~~ 156 (245)
.|.|.+++.+|.|.|.|.+.|. .+.......|.+... ++.+.. ......++
T Consensus 86 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~ 165 (256)
T 3juy_B 86 YMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSPGE 165 (256)
T ss_dssp EEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEECTTS
T ss_pred EEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEeCCC
Confidence 8999999999999999999986 222222334444332 222211 12356789
Q ss_pred eeEEEEEeCCCCCceEEEEEEEeecCCCCeEEEeeCCC------CCCC---cceeeeEEEecCCCCCceEEEEEEEEecC
Q psy12131 157 GYRLVWQVDTYSGIIQYLLKFREREELTPWRNIVIPSD------GSLA---GPIYTQSYNITGLQLFTQYEASVLAKNRF 227 (245)
Q Consensus 157 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~---~~~~~~~~~i~~l~~~~~y~~~v~a~N~~ 227 (245)
.+.|.|...+.++.. ...||+... +..-..+..... .... .......+.|.++...+.+.|.|.|.|..
T Consensus 166 ~v~L~C~~~~~~~~~-~v~W~k~~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 243 (256)
T 3juy_B 166 RATFSCRSSHSIRSR-RVAWYQHKP-GQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGAS 243 (256)
T ss_dssp CEEEEEEESSCCTTC-CEEEEEECT-TSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECCSS
T ss_pred CEEEEEEECCCcCCe-eEEEEEECC-CCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEEEeeCC
Confidence 999999996654311 233555432 111111000000 0000 00112568999999999999999999954
No 368
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.51 E-value=6.8e-14 Score=86.77 Aligned_cols=83 Identities=23% Similarity=0.441 Sum_probs=66.7
Q ss_pred ceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEE-EEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEE
Q psy12131 57 QWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRID-MHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFI 135 (245)
Q Consensus 57 ~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 135 (245)
..+.+..|+.+.|.|.+.|.|.|.+.|++++..+....... .........|.|.++...|.|.|.|.+.|..|.....+
T Consensus 16 ~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~ 95 (100)
T 3caf_A 16 RLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTY 95 (100)
T ss_dssp CEEEECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred cEEEecCCCEEEEEEEccccCCCEEEEEECCEEcccccccccEEEecCeEEEEEccCCcCCCEEEEEEEEeCCCEEEEEE
Confidence 45678899999999999999999999999998876543211 11122345799999999999999999999999988877
Q ss_pred EEEe
Q psy12131 136 QLSG 139 (245)
Q Consensus 136 ~~~~ 139 (245)
.|.+
T Consensus 96 ~l~V 99 (100)
T 3caf_A 96 HLDV 99 (100)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7765
No 369
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.51 E-value=1.2e-13 Score=88.42 Aligned_cols=90 Identities=23% Similarity=0.296 Sum_probs=74.5
Q ss_pred cCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEecc-CCcEEEEecCceeEEEEccCCCCCCeEEEEEEEe
Q psy12131 48 YPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITL-GGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASN 126 (245)
Q Consensus 48 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 126 (245)
.+|.+...+....+..|+.+.|.|.+.|.|.+.+.|++++..+.. ..++.+...+ .|.|.++..+|.|.|+|.+.|
T Consensus 7 ~pP~i~~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~~~~~---~L~i~~v~~~D~G~Y~C~a~n 83 (118)
T 2eo9_A 7 GPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENG---VLQIRYAKLGDTGRYTCIAST 83 (118)
T ss_dssp CSCCCSBCCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEEEETT---EEEEESCCGGGCCCEEEEEEC
T ss_pred CCCEEEcCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEEccCC---EEEEccCCcCCCEEEEEEEEc
Confidence 467777777778889999999999999999999999999987754 4455544433 799999999999999999999
Q ss_pred CCceeEEEEEEEec
Q psy12131 127 NLGSSQQFIQLSGI 140 (245)
Q Consensus 127 ~~g~~~~~~~~~~~ 140 (245)
..|.....+.|.+.
T Consensus 84 ~~g~~~~~~~l~V~ 97 (118)
T 2eo9_A 84 PSGEATWSAYIEVQ 97 (118)
T ss_dssp SSCEEEEECCEEEE
T ss_pred CCCcEEEEEEEEEE
Confidence 99987777666654
No 370
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=99.50 E-value=2.6e-13 Score=106.80 Aligned_cols=166 Identities=11% Similarity=-0.000 Sum_probs=109.7
Q ss_pred CeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCc
Q psy12131 50 PEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLG 129 (245)
Q Consensus 50 p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g 129 (245)
..+...|....+..|.+++|.|.+. .+.+.|++++..+... ...+....|+|.++...|.|.|.|...+...
T Consensus 204 t~i~v~P~~~~v~~Gs~vtl~C~a~---~~~I~W~~ng~~i~~~-----ri~~~~~~L~I~nl~~sd~g~y~~~C~~~~~ 275 (488)
T 2q7n_A 204 TETNVFPQDKVVLAGSNMTICCMSP---TKVLSGQIGNTLRPLI-----HLYGQTVAIHILNIPVSENSGTNIIFITDDD 275 (488)
T ss_dssp SSCCEECTTCEEESSCCCEEEECCS---SCEEEEEETTEECCCE-----ECSSSCEEEECCSCCCCCSSCEEEEEEESSC
T ss_pred CceEECCCCCEEcCCCCEEEEEECC---CCEEEEEECCEECchh-----hccceEEEEEEeCCCcccCCcEEEEEEcCCe
Confidence 3344555566678999999999988 4699999999876543 1244567899999999988888776664333
Q ss_pred eeEEEEEEEecCCCCccccCccccCCCeeEEEEEeCCC-----CCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeee
Q psy12131 130 SSQQFIQLSGIPNIPVFQKSSRRLGPDGYRLVWQVDTY-----SGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQ 204 (245)
Q Consensus 130 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (245)
.....+.+...|.+|....... .....+.++|.+... .+...|.+.|+..+....|......... ..
T Consensus 276 i~~~~l~v~~pP~~P~nl~C~~-~~~~svtcsW~pg~~~~l~G~~~t~Y~L~y~~~g~~~~c~~~~~~~~~-------~~ 347 (488)
T 2q7n_A 276 VYGTVVFAGYPPDVPQKLSCET-HDLKEIICSWNPGRITGLVGPRNTEYTLFESISGKSAVFHRIEGLTNE-------TY 347 (488)
T ss_dssp EEEEEEEEECCCCCCCSCEEEB-SSSSEEEEEECCCSCCCCCTTSSCEEEEEETTTCCEEEEECSSCCCSS-------CE
T ss_pred EEEEEEEeeCCCCCCcccEEEE-cCCCEEEEEEeCCCcCCCCCCCceeEEEEEEECCCCCCCccccccCCc-------eE
Confidence 3334455555666666554332 356799999998433 2578999998754311223222111011 14
Q ss_pred EEEecCCCCCceEEEEEEEEecCCCCC
Q psy12131 205 SYNITGLQLFTQYEASVLAKNRFGWSR 231 (245)
Q Consensus 205 ~~~i~~l~~~~~y~~~v~a~N~~G~~~ 231 (245)
.+.+..+.....|.|+|.|.|..|.+.
T Consensus 348 ~ct~~l~~~~t~Y~f~V~A~N~~G~~~ 374 (488)
T 2q7n_A 348 RLGVQMHPGQEIHNFTLTGRNPLGQAQ 374 (488)
T ss_dssp EEEEECCSSCCCCEEEEEEEETTEEEE
T ss_pred EEEEcCCCCccEEEEEEEEEeCCCCcc
Confidence 566654444689999999999999843
No 371
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.50 E-value=8.5e-14 Score=100.37 Aligned_cols=135 Identities=16% Similarity=0.135 Sum_probs=84.4
Q ss_pred cceEEEee----cceEEEeccCCCCCEEEEEEEEcCCC-----------C-ceeeEEEEEEe----cCCeEEeecceEEe
Q psy12131 2 KEIELLYN----RESLDLDRVTLKLAGLYQCIASNNIG-----------E-STSKNFIVNVI----YPPEVSVEKQWIHT 61 (245)
Q Consensus 2 ~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~~~~~-----------~-~~~~~~~l~v~----~~p~~~~~~~~~~~ 61 (245)
+|+.+..+ ..+|.|.+++.+|+|.|.|.+.+..+ . .......|.|. .+|.+...+....+
T Consensus 73 ~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~ 152 (239)
T 3tv3_H 73 SRLTLALDTPKNLVFLKLNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSASTKGPSVFPLAPSSKS 152 (239)
T ss_dssp GGEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCCCBCCEEEEECCCCCC
T ss_pred CCEEEEEECCCCEEEEEECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccCCCcCCEEEEECCChhh
Confidence 46666643 24599999999999999999986521 0 01122356664 35555544433445
Q ss_pred cCCCeEEEEEEEeec-CCC-eEEEEECCEEeccCCcEEEEecC----ceeEEEEccCCCCCCeEEEEEEEeCCceeEEEE
Q psy12131 62 APDMRAEIICNVYAN-PPA-KVEWFRDGTAITLGGRIDMHVSS----EKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFI 135 (245)
Q Consensus 62 ~~g~~~~l~C~~~~~-~~~-~~~w~~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 135 (245)
..|+.+.|.|.+.+. |.+ .+.|++++..+...........+ ..+.|.|......| |.|+|.+.|..+......
T Consensus 153 ~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~ 231 (239)
T 3tv3_H 153 TSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDK 231 (239)
T ss_dssp --TTEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEE
T ss_pred ccCCcEEEEEEEeeEeCCCeEEEEEECCccCceEecCceECCCCCEEEEEEEEEchhhcCC-CEEEEEEEECCCCceEEE
Confidence 579999999999884 434 58899987532211000011111 12468888888778 999999999876655444
Q ss_pred EE
Q psy12131 136 QL 137 (245)
Q Consensus 136 ~~ 137 (245)
.+
T Consensus 232 ~l 233 (239)
T 3tv3_H 232 RV 233 (239)
T ss_dssp EC
T ss_pred Ee
Confidence 43
No 372
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.50 E-value=4.1e-13 Score=96.20 Aligned_cols=136 Identities=16% Similarity=0.201 Sum_probs=87.1
Q ss_pred cceEEEeec----ceEEEeccCCCCCEEEEEEEEcCCC-----C--ceeeEEEEEEe----cCCeEEeecceEEecCCCe
Q psy12131 2 KEIELLYNR----ESLDLDRVTLKLAGLYQCIASNNIG-----E--STSKNFIVNVI----YPPEVSVEKQWIHTAPDMR 66 (245)
Q Consensus 2 ~~~~~~~~~----~~L~i~~~~~~d~G~Y~C~~~~~~~-----~--~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~ 66 (245)
+|+.+..+. .+|+|.+++.+|+|.|.|.+.+..+ . .......|.|. .+|.+........+..|..
T Consensus 66 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~ 145 (230)
T 3n9g_H 66 GRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGT 145 (230)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECCCSSSTTCCEEEECCCEEEEECSSCCBCCEEEEECCCCCCCTTCE
T ss_pred CcEEEEecCCCCEEEEEECCCChhhCEEEEEEEccCCCCcccccccccCCCEEEEEEecCCCCCEEEecCCCccccCCCC
Confidence 467776543 2499999999999999999987531 1 11233456664 3555554333334568999
Q ss_pred EEEEEEEeec-C-CCeEEEEECCEEeccCCcE--EEEecC----ceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEE
Q psy12131 67 AEIICNVYAN-P-PAKVEWFRDGTAITLGGRI--DMHVSS----EKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLS 138 (245)
Q Consensus 67 ~~l~C~~~~~-~-~~~~~w~~~~~~~~~~~~~--~~~~~~----~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~ 138 (245)
+.|.|.+.+. | .+.+.| ++..+...... .....+ ..+.|.|......| |.|+|.+.+..+.......+.
T Consensus 146 v~L~C~~~~~~P~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~ 222 (230)
T 3n9g_H 146 AALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVE 222 (230)
T ss_dssp EEEEEEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEESTTBTT-BCCEEEEEEGGGTEEEEEECC
T ss_pred EEEEEEEEeEECCCEEEEE--CCcccCCCeEeCCceECCCCCEEEEEEEEECHHHcCC-CeEEEEEEECCCCcceEEEcc
Confidence 9999999874 4 346999 44433211000 001111 12478888888888 999999999887665555554
Q ss_pred ec
Q psy12131 139 GI 140 (245)
Q Consensus 139 ~~ 140 (245)
+.
T Consensus 223 v~ 224 (230)
T 3n9g_H 223 PK 224 (230)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 373
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.50 E-value=9.7e-13 Score=95.19 Aligned_cols=118 Identities=16% Similarity=0.197 Sum_probs=76.8
Q ss_pred EEeecceEEecCCCeEEEEEEEeecCCCeEEEEE----------------CCEEeccC---CcEEEEe-cCceeEEEEcc
Q psy12131 52 VSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFR----------------DGTAITLG---GRIDMHV-SSEKHSLLVRH 111 (245)
Q Consensus 52 ~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~----------------~~~~~~~~---~~~~~~~-~~~~~~l~i~~ 111 (245)
+...+..+.+.+|+.+.|.|.+.+.+.+.+.|++ ++...... .++.+.. ......|.|.+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~ 83 (246)
T 4dzb_B 4 VSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTS 83 (246)
T ss_dssp EEEECSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECS
T ss_pred cEECCcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECC
Confidence 4455667788999999999999998889999998 22222221 3454432 23466899999
Q ss_pred CCCCCCeEEEEEEEeCCc----eeEEEEEEEec-----CCCCccccC----ccccCCCeeEEEEEeCCCCC
Q psy12131 112 IKDTDFGNYMCQASNNLG----SSQQFIQLSGI-----PNIPVFQKS----SRRLGPDGYRLVWQVDTYSG 169 (245)
Q Consensus 112 ~~~~d~g~y~C~~~n~~g----~~~~~~~~~~~-----~~~p~~~~~----~~~~~~~~~~l~~~~~~~~~ 169 (245)
++.+|.|.|.|.+.+..+ .......+.+. +.+|.+... .....+..+.|.|.+.+.+|
T Consensus 84 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p 154 (246)
T 4dzb_B 84 AHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYP 154 (246)
T ss_dssp CCGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBS
T ss_pred CCHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcC
Confidence 999999999999997643 11122233332 123332211 11234789999999965433
No 374
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.49 E-value=6.6e-13 Score=82.23 Aligned_cols=88 Identities=15% Similarity=0.226 Sum_probs=71.6
Q ss_pred CCeEEeecce-EEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeC
Q psy12131 49 PPEVSVEKQW-IHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNN 127 (245)
Q Consensus 49 ~p~~~~~~~~-~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 127 (245)
+|.+...+.. ..+..|+.+.|.|.+. .|.+.+.|++++..+....++.+...+....|.|.++..+|.|.|.|.+
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a--- 82 (100)
T 2yuv_A 7 GAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTA--- 82 (100)
T ss_dssp SCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEESSCBCCCBTTEEEEEETTEEEEEEEEECTTTCCEEEEEE---
T ss_pred CCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEECCEECCCCCCEEEEecCCEEEEEEcCCCcCcCEEEEEEE---
Confidence 5666665554 5788999999999998 7889999999999888777888777777778999999999999999999
Q ss_pred CceeEEEEEEEecC
Q psy12131 128 LGSSQQFIQLSGIP 141 (245)
Q Consensus 128 ~g~~~~~~~~~~~~ 141 (245)
|.......|.+..
T Consensus 83 -g~~~~~~~l~V~~ 95 (100)
T 2yuv_A 83 -GDEKCSTELFVRS 95 (100)
T ss_dssp -TTEEEEEEEEECC
T ss_pred -CCceEEEEEEEec
Confidence 4455555665553
No 375
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.49 E-value=1.9e-13 Score=85.95 Aligned_cols=96 Identities=18% Similarity=0.320 Sum_probs=75.1
Q ss_pred cCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeC
Q psy12131 48 YPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNN 127 (245)
Q Consensus 48 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 127 (245)
.+|.+...+....+.+|+.+.|.|.+.+. |.+.|++++..+....++.+...+....|.|.++..+|.|.|+|.+.|
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n- 83 (108)
T 2dm7_A 7 GPARFTQDLKTKEASEGATATLQCELSKV--APVEWKKGPETLRDGGRYSLKQDGTRCELQIHDLSVADAGEYSCMCGQ- 83 (108)
T ss_dssp CCCCBCSCCBCCEEETTSCEEEEEEBSSS--CCCEEESSSSBCCSSSSCEEEEETTEEEEEESSCCTTTCSEEEEEETT-
T ss_pred CCCeeeecCCcEEEeCCCcEEEEEEeCCC--CeeEEEECCEECCCCCCEEEEecCCEEEEEECCCCcccCEEEEEEEcC-
Confidence 46777666777788999999999999764 789999999888877788777777777899999999999999999955
Q ss_pred CceeEEEEEEEecCCCCccccC
Q psy12131 128 LGSSQQFIQLSGIPNIPVFQKS 149 (245)
Q Consensus 128 ~g~~~~~~~~~~~~~~p~~~~~ 149 (245)
....+.+.+...|+.+...
T Consensus 84 ---~~~~~~l~V~~~p~~~~~~ 102 (108)
T 2dm7_A 84 ---ERTSATLTVRALPARFTEG 102 (108)
T ss_dssp ---EEEEEECEEECCCSSCCCC
T ss_pred ---CEEEEEEEEecCCHHHccC
Confidence 3445555555555555443
No 376
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.49 E-value=2.3e-13 Score=97.68 Aligned_cols=172 Identities=15% Similarity=0.093 Sum_probs=97.6
Q ss_pred cceEEecCCCeEEEEEEEeecCC-C-eEEEEECC--EEe------------ccCCcEEEEecCceeEEEEccCCCCCCeE
Q psy12131 56 KQWIHTAPDMRAEIICNVYANPP-A-KVEWFRDG--TAI------------TLGGRIDMHVSSEKHSLLVRHIKDTDFGN 119 (245)
Q Consensus 56 ~~~~~~~~g~~~~l~C~~~~~~~-~-~~~w~~~~--~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 119 (245)
+....+.+|+.+.|.|.+.+.+. + .+.|+++. ... ....++..........|.|.+++.+|.|.
T Consensus 26 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 105 (234)
T 2j6e_L 26 PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEAD 105 (234)
T ss_dssp CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCSE
T ss_pred CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCEE
Confidence 55567889999999999987543 4 79999853 211 01235555444556789999999999999
Q ss_pred EEEEEEeCCce---eEEEEEEEec--C-CCCccccC---ccccCCCeeEEEEEeCCCCCceEEEEEEEeec-CCCCeEEE
Q psy12131 120 YMCQASNNLGS---SQQFIQLSGI--P-NIPVFQKS---SRRLGPDGYRLVWQVDTYSGIIQYLLKFRERE-ELTPWRNI 189 (245)
Q Consensus 120 y~C~~~n~~g~---~~~~~~~~~~--~-~~p~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 189 (245)
|.|.+.|..+. ......+.+. + .+|.+... .....++.+.|.|.+.+..|...-..|+++.. ........
T Consensus 106 Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~ 185 (234)
T 2j6e_L 106 YYCATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFFPGAVTVAWKADGAPVKAGVETT 185 (234)
T ss_dssp EEEEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEECCCHHHHTTSCCCEEECCCBCSSCCCEEEEEETTEECCSSEEEC
T ss_pred EEEEEEcCCcceeEecCCEEEEEecCCCCCCcccccCCChhHhcCCceEEEEEEEEEcCCceEEEEEECCEECCCCcccc
Confidence 99999998762 2222333332 1 23333221 12245779999999976433311223555433 11111100
Q ss_pred e-eCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCC
Q psy12131 190 V-IPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGW 229 (245)
Q Consensus 190 ~-~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~ 229 (245)
. ....+ ..-.....+.|......+...|.|.|.|..+.
T Consensus 186 ~~~~~~~--~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 224 (234)
T 2j6e_L 186 KPSKQSN--NKYAASSYLSLTPEQWKSHRSYSCQVTHEGST 224 (234)
T ss_dssp CCCCCTT--SCCBCCEEECCCGGGTTTSCCEEEEEEBTTBC
T ss_pred CceECCC--CCEEEEEEEEECHHHcCCCCeEEEEEEeCCCc
Confidence 0 00000 00001134666665555555666669998764
No 377
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.49 E-value=3.3e-13 Score=97.19 Aligned_cols=127 Identities=20% Similarity=0.271 Sum_probs=80.5
Q ss_pred cceEEEe---ecceEEEeccCCCCCEEEEEEEEcCCC---C-ceeeEEEEEEec------CCeEEee-cceEEecCCCeE
Q psy12131 2 KEIELLY---NRESLDLDRVTLKLAGLYQCIASNNIG---E-STSKNFIVNVIY------PPEVSVE-KQWIHTAPDMRA 67 (245)
Q Consensus 2 ~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~~~~~~~---~-~~~~~~~l~v~~------~p~~~~~-~~~~~~~~g~~~ 67 (245)
+|+.+.. +..+|.|.+++.+|+|.|+|.+.+..+ . .......|.|.. +|.+... +....+..|+.+
T Consensus 60 ~R~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~ 139 (238)
T 1bec_A 60 DGYKASRPSQEQFSLILELATPSQTSVYFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQKA 139 (238)
T ss_dssp TTCEEECCSSSEEEEEESSCCGGGCEEEEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECCCSTTCSSSCSC
T ss_pred ceEEEEecCCCEEEEEEecCCcccCEEEEEEEecCCCCccccccCCCEEEEEeccCCCCCCCceEEECCChHHcccCCce
Confidence 4555543 235799999999999999999998642 1 112234577764 5655543 222334579999
Q ss_pred EEEEEEeec-CCC-eEEEEECCEEeccCCcEE---E-EecCc---eeEEEEccCCCCC-CeEEEEEEEeCC
Q psy12131 68 EIICNVYAN-PPA-KVEWFRDGTAITLGGRID---M-HVSSE---KHSLLVRHIKDTD-FGNYMCQASNNL 128 (245)
Q Consensus 68 ~l~C~~~~~-~~~-~~~w~~~~~~~~~~~~~~---~-~~~~~---~~~l~i~~~~~~d-~g~y~C~~~n~~ 128 (245)
.|.|.+.|. |.+ .+.|++++..+....... . ..++. .+.|.|......| .|.|+|.+.|..
T Consensus 140 ~L~C~~~g~~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~~ 210 (238)
T 1bec_A 140 TLVCLARGFFPDHVELSWWVNGKEVHSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHG 210 (238)
T ss_dssp SEEEEEEEEBSCCEEEEEEETTEEECTTEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEECC
T ss_pred EEEEEEeeEeCCCcEEEEEECCEECCCceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEcCC
Confidence 999999986 655 999999998876542211 1 11111 1223333333333 678999999974
No 378
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.49 E-value=1.2e-13 Score=99.10 Aligned_cols=127 Identities=17% Similarity=0.170 Sum_probs=80.7
Q ss_pred cceEEEee----cceEEEeccCCCCCEEEEEEEEcC--CCC-ceeeEEEEEEec---------CCeEEee-cceEEecCC
Q psy12131 2 KEIELLYN----RESLDLDRVTLKLAGLYQCIASNN--IGE-STSKNFIVNVIY---------PPEVSVE-KQWIHTAPD 64 (245)
Q Consensus 2 ~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~~~--~~~-~~~~~~~l~v~~---------~p~~~~~-~~~~~~~~g 64 (245)
+|+++..+ ..+|.|.+++.+|+|.|.|.+.+. ... .......|.|.. +|.+... +....+..|
T Consensus 66 ~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~~p~~~~v~~g 145 (230)
T 1ypz_F 66 KKMEASKNPSASTSILTIYSLEEEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLH 145 (230)
T ss_dssp SEEEEEECCTTTEEEEEECSCCGGGCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEECCCHHHHHHH
T ss_pred CeEEEEEcCCCCEEEEEECcCChhhCEEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceEECCCchhhccC
Confidence 56777643 247999999999999999999974 111 112335677751 2332222 222223458
Q ss_pred CeEEEEEEEeec-CC-CeEEEEE-CCEEeccCCcEE-EEecC---ceeEEEEccCCCCCCeEEEEEEEeCCce
Q psy12131 65 MRAEIICNVYAN-PP-AKVEWFR-DGTAITLGGRID-MHVSS---EKHSLLVRHIKDTDFGNYMCQASNNLGS 130 (245)
Q Consensus 65 ~~~~l~C~~~~~-~~-~~~~w~~-~~~~~~~~~~~~-~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~ 130 (245)
..+.|.|.+.+. |. +.+.|++ ++..+....... ...++ ..+.|.|..... + |.|+|.+.|..+.
T Consensus 146 ~~~~L~C~~~g~~P~~~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-~~ytC~v~~~~~~ 216 (230)
T 1ypz_F 146 KTGTYLCLLEAFFPDVIRVYWKEKDGNTILDSQEGDTLKTNDTYMKFSWLTVPERAM-G-KEHRCIVKHENNK 216 (230)
T ss_dssp SCEEEEEEEEEESSCCCEEEEECTTSSCBCCCEECCCEEETTEEEEEEEEEECGGGT-T-SCEEEEEECSSCT
T ss_pred CcceEEEEEeeecCCCeEEEEEccCCeEccccccceeecCCCCEEEEEEEEEEhhhC-C-CEEEEEEEECCCC
Confidence 899999999886 65 5999999 776554221000 11111 124678877765 4 9999999998754
No 379
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.49 E-value=1.2e-13 Score=86.56 Aligned_cols=89 Identities=17% Similarity=0.275 Sum_probs=74.1
Q ss_pred CCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCC
Q psy12131 49 PPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNL 128 (245)
Q Consensus 49 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 128 (245)
+|.+...+....+.+|+.+.|.|.+.+.+.+ +.|++++..+....++.+...+....|.|.++..+|.|.|.|.+.|..
T Consensus 8 ~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 86 (106)
T 2dlt_A 8 QLEVLQDIADLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPSKRITISHVGRFHKLVIDDVRPEDEGDYTFVPDGYA 86 (106)
T ss_dssp CCCEEECCCCEEEESSCCEECCCEESCSSCE-EEEEESSCBCCCCSSCEEEEETTEEEEEESSCCTTTCSCEEEEEETSC
T ss_pred CCEEecCCCCeEEeCCCeEEEEEEEcCCCcc-eEEEcCCEECcCCCCEEEEEeCCEEEEEECCCCcCCCEEEEEEEccCC
Confidence 5677777778889999999999999988877 999999998887778777777777899999999999999999999984
Q ss_pred ceeEEEEEEE
Q psy12131 129 GSSQQFIQLS 138 (245)
Q Consensus 129 g~~~~~~~~~ 138 (245)
......+.+.
T Consensus 87 ~~~~~~l~V~ 96 (106)
T 2dlt_A 87 LSLSAKLNFL 96 (106)
T ss_dssp CCCCBCEEEE
T ss_pred ceEEEEEEEE
Confidence 4444444444
No 380
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.49 E-value=4.5e-12 Score=92.24 Aligned_cols=168 Identities=13% Similarity=0.128 Sum_probs=101.2
Q ss_pred eEEecCCCeEEEEEEEeecC--CCeEEEEEC--CEE---e--------------ccCCcEEEEec--CceeEEEEccCCC
Q psy12131 58 WIHTAPDMRAEIICNVYANP--PAKVEWFRD--GTA---I--------------TLGGRIDMHVS--SEKHSLLVRHIKD 114 (245)
Q Consensus 58 ~~~~~~g~~~~l~C~~~~~~--~~~~~w~~~--~~~---~--------------~~~~~~~~~~~--~~~~~l~i~~~~~ 114 (245)
...+.+|+.+.|.|.+.+.+ .+.+.|++. +.. + ....++.+... .....|.|.+++.
T Consensus 11 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 90 (256)
T 3umt_A 11 LELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSLTS 90 (256)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCG
T ss_pred ceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCCCc
Confidence 35588999999999998865 578999972 211 1 01234554432 3356799999999
Q ss_pred CCCeEEEEEEEeC----CceeEEEEEEEecCC---------------CCccccC---ccccCCCeeEEEEEeCCCCCceE
Q psy12131 115 TDFGNYMCQASNN----LGSSQQFIQLSGIPN---------------IPVFQKS---SRRLGPDGYRLVWQVDTYSGIIQ 172 (245)
Q Consensus 115 ~d~g~y~C~~~n~----~g~~~~~~~~~~~~~---------------~p~~~~~---~~~~~~~~~~l~~~~~~~~~~~~ 172 (245)
+|.|.|.|.+.|. .+.......|.+... +|.+... .....++.++|.|...+.++.
T Consensus 91 ~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~-- 168 (256)
T 3umt_A 91 EDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCRASQDIGS-- 168 (256)
T ss_dssp GGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEEESSCCTT--
T ss_pred ccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEEEecCCCc--
Confidence 9999999999987 232233334444421 3332221 235678999999999765433
Q ss_pred EEEEEEeecCCCCeEEEeeCCC------CCCC---cceeeeEEEecCCCCCceEEEEEEEEecCC
Q psy12131 173 YLLKFREREELTPWRNIVIPSD------GSLA---GPIYTQSYNITGLQLFTQYEASVLAKNRFG 228 (245)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~------~~~~---~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G 228 (245)
...||+... +..-..+..... .... .......|.|.++...+.+.|.|.|.|..+
T Consensus 169 ~v~W~k~~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 232 (256)
T 3umt_A 169 NLNWLQQKP-DGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSP 232 (256)
T ss_dssp CEEEEEECT-TCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSSS
T ss_pred EEEEEEECC-CCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCCC
Confidence 344666432 111110100000 0000 001124689999999999999999999643
No 381
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.49 E-value=6.8e-13 Score=83.41 Aligned_cols=92 Identities=14% Similarity=0.092 Sum_probs=69.7
Q ss_pred CCeEEeecceEEecCCCeEEEEEEEeecCC---CeEEEEECCEEecc---CCcEEEEe---c---CceeEEEEccCCCCC
Q psy12131 49 PPEVSVEKQWIHTAPDMRAEIICNVYANPP---AKVEWFRDGTAITL---GGRIDMHV---S---SEKHSLLVRHIKDTD 116 (245)
Q Consensus 49 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~---~~~~w~~~~~~~~~---~~~~~~~~---~---~~~~~l~i~~~~~~d 116 (245)
.|.+...+..+.+..|+.+.|.|.+.|.|. |.+.|++++..... ..++.+.. . .....|.|.++..+|
T Consensus 4 ~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 83 (108)
T 3cx2_A 4 IGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAF 83 (108)
T ss_dssp CCSCSBCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGGG
T ss_pred ccEEEeCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCcc
Confidence 355666677788899999999999999988 99999997732211 22333321 0 124689999999999
Q ss_pred CeEEEEEEEeCCceeEEEEEEEec
Q psy12131 117 FGNYMCQASNNLGSSQQFIQLSGI 140 (245)
Q Consensus 117 ~g~y~C~~~n~~g~~~~~~~~~~~ 140 (245)
.|.|.|.+.|..|.....+.|.+.
T Consensus 84 ~G~Y~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 84 TGSYRCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEEE
T ss_pred CEEEEEEEecCCCceEEEEEEEEe
Confidence 999999999999998888887753
No 382
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.49 E-value=3.2e-13 Score=97.86 Aligned_cols=130 Identities=15% Similarity=0.215 Sum_probs=82.4
Q ss_pred cceEEEeec----ceEEEeccCCCCCEEEEEEEEcCCC---------------------CceeeEEEEEEe----cCCeE
Q psy12131 2 KEIELLYNR----ESLDLDRVTLKLAGLYQCIASNNIG---------------------ESTSKNFIVNVI----YPPEV 52 (245)
Q Consensus 2 ~~~~~~~~~----~~L~i~~~~~~d~G~Y~C~~~~~~~---------------------~~~~~~~~l~v~----~~p~~ 52 (245)
+|+++..+. .+|+|.+++.+|+|.|.|.+.+..+ ........|.|. .+|.+
T Consensus 65 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v 144 (248)
T 3u2s_H 65 GRLSISRDNSKDTLYLQMNSLRVEDTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSSASTKGPSV 144 (248)
T ss_dssp TTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECSCCCBCCEE
T ss_pred CcEEEEecCCCCEEEEEECCCCHHHCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEcccCCCCCEE
Confidence 567776432 3599999999999999999986411 011223456665 35555
Q ss_pred EeecceEEecCCCeEEEEEEEeec-C-CCeEEEEECCEEecc---------CCcEEEEecCceeEEEEccCCCCCCeEEE
Q psy12131 53 SVEKQWIHTAPDMRAEIICNVYAN-P-PAKVEWFRDGTAITL---------GGRIDMHVSSEKHSLLVRHIKDTDFGNYM 121 (245)
Q Consensus 53 ~~~~~~~~~~~g~~~~l~C~~~~~-~-~~~~~w~~~~~~~~~---------~~~~~~~~~~~~~~l~i~~~~~~d~g~y~ 121 (245)
...+....+..|+.+.|.|.+.+. | ...+.|++++..+.. +..+.+ .+.|.|......+ |.|+
T Consensus 145 ~~~~~~~~~~~g~~~~L~C~~~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~-----~s~L~i~~~~~~~-~~yt 218 (248)
T 3u2s_H 145 FPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSL-----SSVVTVPSSSLGT-QTYI 218 (248)
T ss_dssp EEECCC------CEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEE-----EEEEEEEGGGBTT-BCCE
T ss_pred EEeCCCccccCCCcEEEEEEEeeEECCCeEEEEeECCccCceeecCceECCCCCEEE-----EEEEEEChhhcCC-CeEE
Confidence 544333445579999999999874 4 347999998753211 112221 2467788877777 9999
Q ss_pred EEEEeCCceeEEEEEE
Q psy12131 122 CQASNNLGSSQQFIQL 137 (245)
Q Consensus 122 C~~~n~~g~~~~~~~~ 137 (245)
|.+.|..+.......+
T Consensus 219 C~v~h~~~~~~~~~~l 234 (248)
T 3u2s_H 219 CNVNHKPSNTKVDKKV 234 (248)
T ss_dssp EEEEEGGGTEEEEEEC
T ss_pred EEEEECCCCcceEEEE
Confidence 9999987665544443
No 383
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.48 E-value=2.8e-14 Score=101.67 Aligned_cols=176 Identities=13% Similarity=0.093 Sum_probs=100.1
Q ss_pred eEEecCCCeEEEEEEEeecCC-----CeEEEEECCEEe-------------ccCCcEEEEe---cCceeEEEEccCCCCC
Q psy12131 58 WIHTAPDMRAEIICNVYANPP-----AKVEWFRDGTAI-------------TLGGRIDMHV---SSEKHSLLVRHIKDTD 116 (245)
Q Consensus 58 ~~~~~~g~~~~l~C~~~~~~~-----~~~~w~~~~~~~-------------~~~~~~~~~~---~~~~~~l~i~~~~~~d 116 (245)
.+.+.+|+.+.|.|.+.+.+. +.+.|++++... ....+..+.. ......|.|.++..+|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D 83 (222)
T 4i0k_A 4 PVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTD 83 (222)
T ss_dssp CCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGG
T ss_pred CEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCccccc
Confidence 345779999999999987754 689999976322 1112222211 1125679999999999
Q ss_pred CeEEEEEEEeCCceeEEEEEEEe--cCCCCccccC--ccccCCCeeEEEEEe-CCCCCceEEEEEEEeec--CCCCeEE-
Q psy12131 117 FGNYMCQASNNLGSSQQFIQLSG--IPNIPVFQKS--SRRLGPDGYRLVWQV-DTYSGIIQYLLKFRERE--ELTPWRN- 188 (245)
Q Consensus 117 ~g~y~C~~~n~~g~~~~~~~~~~--~~~~p~~~~~--~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~- 188 (245)
.|.|+|.+.+.. .....+.+.+ .+.+|.+... .....++.+.|.|.+ .+.++. .+. |++..+ .......
T Consensus 84 ~G~Y~C~~~~~~-~~~~~~~l~V~~~~~~p~i~~~~~~~v~~G~~~~l~C~~~~g~P~~-~v~-W~~~~~~~~~~~~~~~ 160 (222)
T 4i0k_A 84 EGSYTCFVSIQD-FDSAAVSLQVAAPYSKPSMTLEPNKDLRPGNMVTITCSSYQGYPEA-EVF-WKDGQGVPLTGNVTTS 160 (222)
T ss_dssp CSCEEEEEEECC-CCCCCCCCCCCBCCCCCEEECCC-----CCSEEEEEEEEEEEBSCC-EEE-EECTTSCBCCSEEEEE
T ss_pred CEEEEEEEEeCC-CceEEEEEEEEcCCCCCcEEeCCCceecCCceEEEEEecccccCCC-eEE-EEcCCCccCCCCccee
Confidence 999999999863 3333333333 3333443322 234568899999999 544332 222 444222 1111111
Q ss_pred EeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceEEecCC
Q psy12131 189 IVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYVFATEG 242 (245)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~~t~~ 242 (245)
....... ....+.+.++...+.+.|+|.|.|..|....+..+.+...|
T Consensus 161 ~~~~~~~------~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 208 (222)
T 4i0k_A 161 QMANERG------LFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQP 208 (222)
T ss_dssp EEECTTS------CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC--
T ss_pred EEcCCCC------eEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEeCCc
Confidence 1111111 11234555555566667777799999987776666665444
No 384
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.48 E-value=5.3e-13 Score=91.91 Aligned_cols=153 Identities=11% Similarity=0.082 Sum_probs=96.6
Q ss_pred ceEEecCCCeEEEEEEEe--ecCCCeEEEEE--CCEEe----------ccCCcEEEEecCceeEEEEccCCCCCCeEEEE
Q psy12131 57 QWIHTAPDMRAEIICNVY--ANPPAKVEWFR--DGTAI----------TLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMC 122 (245)
Q Consensus 57 ~~~~~~~g~~~~l~C~~~--~~~~~~~~w~~--~~~~~----------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 122 (245)
..+.+..|+++.|.|... +.+.+.+.|++ ++..+ ....++.+..+ .+|.|.+++..|.|.|.|
T Consensus 7 ~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~n---gsL~I~~v~~~DsG~Y~c 83 (182)
T 1hnf_A 7 LETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKN---GTLKIKHLKTDDQDIYKV 83 (182)
T ss_dssp EEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTT---SCEEECSCCGGGCEEEEE
T ss_pred cEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCC---CCEEECCCChhhCEEEEE
Confidence 456678999999999543 24457899999 88766 23445555433 389999999999999999
Q ss_pred EEEeCCceeE--EEEEEEecC--CCCccccCccccCCCeeEEEEEeCCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCC
Q psy12131 123 QASNNLGSSQ--QFIQLSGIP--NIPVFQKSSRRLGPDGYRLVWQVDTYSGIIQYLLKFREREELTPWRNIVIPSDGSLA 198 (245)
Q Consensus 123 ~~~n~~g~~~--~~~~~~~~~--~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (245)
.+.|..|... ..+.|.+.. ..|.+.. ....+.|.|.+.+.+++ .|. |+++.. .. .. ..
T Consensus 84 ~~~n~~g~~~~~~~~~L~V~~~~~~P~i~~-----~~~~v~L~C~~~~~p~~-~~~-W~~~g~---~l---~~-~~---- 145 (182)
T 1hnf_A 84 SIYDTKGKNVLEKIFDLKIQERVSKPKISW-----TCINTTLTCEVMNGTDP-ELN-LYQDGK---HL---KL-SQ---- 145 (182)
T ss_dssp EEEETTSCEEEEEEEEEEEECCCCCCEEEE-----ETTTTEEEEECSSCSSC-EEE-EEESSC---EE---EE-ES----
T ss_pred EEEeCCCceeEEEEEEEEEcCcCCCCEEEE-----ccCcEEEEeEccCCCCC-EEE-EEECCE---EC---CC-CC----
Confidence 9999877643 344555442 2333322 23368999999765433 343 444422 11 11 01
Q ss_pred cceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcce
Q psy12131 199 GPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAY 236 (245)
Q Consensus 199 ~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~ 236 (245)
..+.+.. ...+.+.|+|.|.|.+|....+..+
T Consensus 146 -----~~i~~~~-~~~d~G~Y~C~a~N~~~~~~s~~~~ 177 (182)
T 1hnf_A 146 -----RVITHKW-TTSLSAKFKCTAGNKVSKESSVEPV 177 (182)
T ss_dssp -----SCEEEEC-CSCEEEEEEEEEECSSCEEEEEEEE
T ss_pred -----cEEEEec-ccCCCcEEEEEEEeCCCCcEEccee
Confidence 2222222 3566778888899999876554433
No 385
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.48 E-value=5.2e-13 Score=97.09 Aligned_cols=126 Identities=17% Similarity=0.259 Sum_probs=81.0
Q ss_pred ceEEEeecce-EEEeccCCCCCEEEEEEEEcCCC---C--ceeeEEEEEEe------cCCeEEeec-ceEEecCCCeEEE
Q psy12131 3 EIELLYNRES-LDLDRVTLKLAGLYQCIASNNIG---E--STSKNFIVNVI------YPPEVSVEK-QWIHTAPDMRAEI 69 (245)
Q Consensus 3 ~~~~~~~~~~-L~i~~~~~~d~G~Y~C~~~~~~~---~--~~~~~~~l~v~------~~p~~~~~~-~~~~~~~g~~~~l 69 (245)
|+.+..++.. |.|.+++.+|+|.|+|.+.+..+ . .......|.|. .+|.+...+ ....+..|..+.|
T Consensus 65 R~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L 144 (253)
T 3to4_D 65 DYLATRVTDTELRLQVANMSQGRTLYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATL 144 (253)
T ss_dssp EEEEECCSSSCCEEEEESCSSCEEEEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEE
T ss_pred cEEEEeCCCCeEEEccCChhhCeEEEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceEE
Confidence 5665543322 99999999999999999987543 1 12233456665 345544322 2222234689999
Q ss_pred EEEEee-cCCC-eEEEEECCEEeccCCcEEE---E-----ecCc---eeEEEEccCCCCC-CeEEEEEEEeCC
Q psy12131 70 ICNVYA-NPPA-KVEWFRDGTAITLGGRIDM---H-----VSSE---KHSLLVRHIKDTD-FGNYMCQASNNL 128 (245)
Q Consensus 70 ~C~~~~-~~~~-~~~w~~~~~~~~~~~~~~~---~-----~~~~---~~~l~i~~~~~~d-~g~y~C~~~n~~ 128 (245)
.|.+.+ .|.+ .+.|++++..+........ . .++. .+.|.|......| .|.|+|.+.+..
T Consensus 145 ~C~~~g~~P~~i~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~h~~ 217 (253)
T 3to4_D 145 VCLATGFYPDHVELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYG 217 (253)
T ss_dssp EEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECC
T ss_pred EEEEceEECCcEEEEEEECCEECCCceecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEeCC
Confidence 999998 5666 8999999988764321100 0 0110 2367777766666 779999999964
No 386
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.48 E-value=1.2e-12 Score=95.56 Aligned_cols=176 Identities=12% Similarity=0.140 Sum_probs=91.8
Q ss_pred CeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEEC--C-E--Eecc-C--------------CcEEE-EecCceeEEE
Q psy12131 50 PEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRD--G-T--AITL-G--------------GRIDM-HVSSEKHSLL 108 (245)
Q Consensus 50 p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~--~-~--~~~~-~--------------~~~~~-~~~~~~~~l~ 108 (245)
|.+...+..+.+.+|+.+.|.|.+.+.+.+.+.|++. + . .+.. . ..+.. ........|.
T Consensus 3 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 82 (259)
T 3omz_A 3 SNLEGRTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMI 82 (259)
T ss_dssp --------CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEE
T ss_pred cccccCCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEE
Confidence 4555566677889999999999999988889999982 1 1 1100 0 11111 1122345799
Q ss_pred EccCCCCCCeEEEEEEEeCCc---eeEEEEEEEecCC----------------CCccccC---ccccCCCeeEEEEEeCC
Q psy12131 109 VRHIKDTDFGNYMCQASNNLG---SSQQFIQLSGIPN----------------IPVFQKS---SRRLGPDGYRLVWQVDT 166 (245)
Q Consensus 109 i~~~~~~d~g~y~C~~~n~~g---~~~~~~~~~~~~~----------------~p~~~~~---~~~~~~~~~~l~~~~~~ 166 (245)
|.+++.+|.|.|.|.+.|..+ .......|.+... ++.+... .....++.+.|.|...+
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~ 162 (259)
T 3omz_A 83 LRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTLNCLYET 162 (259)
T ss_dssp ESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEECCEEEC
T ss_pred ECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEEEEECCC
Confidence 999999999999999998765 2222233333221 1122111 23567899999998865
Q ss_pred CCCceEEEEEEEeec-CCCCeEEEeeCCCCC-------C--CcceeeeEEEecCCCCCceEEEEEEEEec
Q psy12131 167 YSGIIQYLLKFRERE-ELTPWRNIVIPSDGS-------L--AGPIYTQSYNITGLQLFTQYEASVLAKNR 226 (245)
Q Consensus 167 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-------~--~~~~~~~~~~i~~l~~~~~y~~~v~a~N~ 226 (245)
..+.. ...||+... ....+.......... . ........+.|.++...+.+.|.|.|.+.
T Consensus 163 ~~~~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 231 (259)
T 3omz_A 163 SWWSY-YIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCALGES 231 (259)
T ss_dssp CCSSC-EEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEEEESC
T ss_pred ccCCc-eEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEEEeCc
Confidence 32222 334565432 111111110000000 0 00111256899999988888888888754
No 387
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.48 E-value=1.1e-13 Score=88.34 Aligned_cols=92 Identities=15% Similarity=0.172 Sum_probs=68.6
Q ss_pred CeEEeecceEEecCCCeEEEEEEEeec---CCCeEEEEECCEE-ec--cCCcEEEEec--C----ceeEEEEccCCCCCC
Q psy12131 50 PEVSVEKQWIHTAPDMRAEIICNVYAN---PPAKVEWFRDGTA-IT--LGGRIDMHVS--S----EKHSLLVRHIKDTDF 117 (245)
Q Consensus 50 p~~~~~~~~~~~~~g~~~~l~C~~~~~---~~~~~~w~~~~~~-~~--~~~~~~~~~~--~----~~~~l~i~~~~~~d~ 117 (245)
|.|...|..+.+.+|+.+.|.|.+.+. |.|.+.|+|+... +. ...++.+... . ....|.|.++...|.
T Consensus 8 ~~F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~Da 87 (126)
T 2dav_A 8 ILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFA 87 (126)
T ss_dssp CSCCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSC
T ss_pred cEEEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccC
Confidence 335556677788999999999999875 7899999997421 11 1334444211 1 147899999999999
Q ss_pred eEEEEEEEeCCceeEEEEEEEecC
Q psy12131 118 GNYMCQASNNLGSSQQFIQLSGIP 141 (245)
Q Consensus 118 g~y~C~~~n~~g~~~~~~~~~~~~ 141 (245)
|.|+|.+.|..|.....+.|.+..
T Consensus 88 G~Y~Cevsn~~g~~~~~~~L~V~~ 111 (126)
T 2dav_A 88 GNYRCEVTYKDKFDSCSFDLEVHE 111 (126)
T ss_dssp EEEEEEEECSSCEEEECCEEEEEC
T ss_pred EEEEEEEEeCCCcEEEEEEEEEEe
Confidence 999999999999888777776654
No 388
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.48 E-value=5.8e-14 Score=87.24 Aligned_cols=77 Identities=19% Similarity=0.330 Sum_probs=66.7
Q ss_pred CCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCC----cEEEEecCceeEEEEccCCCCCCeEEEEEE
Q psy12131 49 PPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGG----RIDMHVSSEKHSLLVRHIKDTDFGNYMCQA 124 (245)
Q Consensus 49 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~----~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 124 (245)
+|.+...+....+.+|+.+.|.|.+.+.| +.+.|++++..+.... ++.+...+....|.|.++..+|.|.|.|.+
T Consensus 8 p~~~~~~~~~~~v~~G~~v~l~C~~~~~~-~~v~W~k~g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 86 (101)
T 2edk_A 8 PVLIVTPLEDQQVFVGDRVEMAVEVSEEG-AQVMWMKNGVELTREDSFKARYRFKKDGKRHILIFSDVVQEDRGRYQVIT 86 (101)
T ss_dssp CCCEEECCCCEEEESSCCCBCCEEESCSS-CCCEEEESSCBCCCSCCSSCCCEEEECSSEEEEECSSCCGGGCSBEEEEC
T ss_pred CCEEEecCCceEEcCCCCEEEEEEEeCCC-CEEEEEECCEECCCCCCcceeEEEEECCCEEEEEECCCChhhCEEEEEEE
Confidence 56666667778889999999999999888 9999999998887665 567777777788999999999999999999
Q ss_pred Ee
Q psy12131 125 SN 126 (245)
Q Consensus 125 ~n 126 (245)
.|
T Consensus 87 ~n 88 (101)
T 2edk_A 87 NG 88 (101)
T ss_dssp SS
T ss_pred cC
Confidence 98
No 389
>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.48 E-value=3.8e-13 Score=84.29 Aligned_cols=96 Identities=24% Similarity=0.347 Sum_probs=74.1
Q ss_pred cCCCCccccCccccCCCeeEEEEEeCCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEE
Q psy12131 140 IPNIPVFQKSSRRLGPDGYRLVWQVDTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEA 219 (245)
Q Consensus 140 ~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~ 219 (245)
.|.+|...... .....++.|.|.+..+.++.+|.|+|+.......|..+.. .. ...+.+.+|.+++.|.|
T Consensus 7 ~P~~P~~~~~~-~~~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~--~~-------~~~~~i~~L~p~t~Y~~ 76 (106)
T 2dju_A 7 GPKPPIDLVVT-ETTATSVTLTWDSGNSEPVTYYGIQYRAAGTEGPFQEVDG--VA-------TTRYSIGGLSPFSEYAF 76 (106)
T ss_dssp SCCCCEEEEEE-EEETTEEEEEEECCCSSCCSEEEEEEEETTCCSCCCCBCC--CC-------SSEEEEESCCTTCEEEE
T ss_pred CCcCCCCcEEE-eccCCEEEEEEcCCCCCCceEEEEEEEECCCCCCeEEccC--CC-------ccEEEEeCCCCCcEEEE
Confidence 45555444332 2466799999999767789999999988763445654321 11 26789999999999999
Q ss_pred EEEEEecCCCCCCCcceEEecCCCCC
Q psy12131 220 SVLAKNRFGWSRPSKAYVFATEGAET 245 (245)
Q Consensus 220 ~v~a~N~~G~~~~s~~~~~~t~~~~~ 245 (245)
+|.|.|..|.|.+|..+.++|.+++|
T Consensus 77 ~V~A~n~~G~~~~S~~~~~~T~~~~P 102 (106)
T 2dju_A 77 RVLAVNSIGRGPPSEAVRARTGEQSG 102 (106)
T ss_dssp EEEEECSSCBCCCCCCEEEECCCSSC
T ss_pred EEEEEeCCccCCCcccEEeEcCCCCC
Confidence 99999999999999999999988754
No 390
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=99.47 E-value=2.5e-13 Score=110.47 Aligned_cols=214 Identities=17% Similarity=0.172 Sum_probs=127.7
Q ss_pred cceEEEeccCCCCCEEEEEEEEcCCC-CceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCE
Q psy12131 10 RESLDLDRVTLKLAGLYQCIASNNIG-ESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGT 88 (245)
Q Consensus 10 ~~~L~i~~~~~~d~G~Y~C~~~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~ 88 (245)
.+.|+|.++...|.+ |+|.+..... ......+.|.|..+|. ....|.|...+.....+.|.....
T Consensus 63 ~~~l~i~~~~~~~~~-y~C~~~~~~~~~~~~~~~~l~v~~pP~-------------~P~nl~c~~~~~~~~~~~W~~~~~ 128 (589)
T 3l5h_A 63 ASSVTFTDIASLNIQ-LTCNILTFGQLEQNVYGITIISGLPPE-------------KPKNLSCIVNEGKKMRCEWDGGRE 128 (589)
T ss_dssp CCBCCCCCCCSSCCC-CCCC-CCTTCC-CCCCCCCCCC-CCCC-------------CCEEEEEEEETTSCEEEEEECCSC
T ss_pred EeEEEEecCCCccee-eEEecccCCCcccEEEeEEEeccCCCC-------------CCEeeEEEECCCceEEEEECCCCc
Confidence 456999999998865 7798873211 1123334455545543 334566666555445566654221
Q ss_pred EeccCCcEEEE-------------ecCceeEEEEc-cCCCCCCeEEEEEEEeCCceeEE-EEEEE----ecCCCCccccC
Q psy12131 89 AITLGGRIDMH-------------VSSEKHSLLVR-HIKDTDFGNYMCQASNNLGSSQQ-FIQLS----GIPNIPVFQKS 149 (245)
Q Consensus 89 ~~~~~~~~~~~-------------~~~~~~~l~i~-~~~~~d~g~y~C~~~n~~g~~~~-~~~~~----~~~~~p~~~~~ 149 (245)
.. ....+.+. ..+....+.+. .+.......|+|.|.|..|.... .+.+. +.|.||.....
T Consensus 129 ~~-~~~~y~l~~~~~~~~~~~c~~~~~~~~~c~~~~~l~~~~~Y~~~v~a~n~~G~~~s~~~~~~~~~~~~p~pP~~~~~ 207 (589)
T 3l5h_A 129 TH-LETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSV 207 (589)
T ss_dssp CS-SCEEEEECCBCSSSBCCCEECBTTBSSCCBCCSCCCSSSCEEECEEEEESSCCBCCCCEEECGGGSEECCCCCSCEE
T ss_pred CC-cCceEEEEEEEcCCCcccCCCCCCCcEEEEECCCCchheeEEEEEEEEeCCCCcccccEEEccccEEEcCCCceEEE
Confidence 10 00111111 11112233444 45555667888999999886422 22222 25667655443
Q ss_pred c-cccCCCeeEEEEEeCC--CCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEec
Q psy12131 150 S-RRLGPDGYRLVWQVDT--YSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNR 226 (245)
Q Consensus 150 ~-~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~ 226 (245)
. .......+.|+|.++. +.++..|.++|+... ...|..+..... ......+.+.+|.+++.|.|+|+|.|.
T Consensus 208 ~~~~~~~~~v~l~W~~p~~~~~~~~~Y~v~~~~~~-~~~w~~~~~~~~-----~~~~~~~~i~~L~p~t~Y~~~V~a~~~ 281 (589)
T 3l5h_A 208 INSEELSSILKLTWTNPSIKSVIILKYNIQYRTKD-ASTWSQIPPEDT-----ASTRSSFTVQDLKPFTEYVFRIRCMKE 281 (589)
T ss_dssp ECTTTCTTCEEEECCCCGGGGTSCEEEEEEEEETT-CSCCBCCCTTSS-----CSCCSEEEECSCCSSCCEEEEEEEEES
T ss_pred EecCCCCCeEEEEeCCCCCCCeeeEEEEEEECCCC-CCCcEEEccccC-----cCceeEEEECCCCCCCEEEEEEEEEeC
Confidence 2 2356779999999733 467899999999875 567865432111 011267899999999999999999999
Q ss_pred CCCCCC---CcceEEecCCCC
Q psy12131 227 FGWSRP---SKAYVFATEGAE 244 (245)
Q Consensus 227 ~G~~~~---s~~~~~~t~~~~ 244 (245)
.|.|.+ |..+.+.|.+.+
T Consensus 282 ~g~g~~S~~S~~~~~~T~~~~ 302 (589)
T 3l5h_A 282 DGKGYWSDWSEEASGITYEDR 302 (589)
T ss_dssp SSCSCCCCCCCCBCCCCCCCC
T ss_pred CCCCccCCCCCccccccCccC
Confidence 998665 667777776643
No 391
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.47 E-value=8e-13 Score=80.35 Aligned_cols=82 Identities=18% Similarity=0.332 Sum_probs=66.4
Q ss_pred CCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCC
Q psy12131 49 PPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNL 128 (245)
Q Consensus 49 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 128 (245)
++.+...|....+..|+.+.|.|.+.|.|.|.+.|++++..+.... ...|.|.++..+|.|.|.|.+.|..
T Consensus 3 ~~~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~---------~~~L~i~~v~~~d~G~Y~C~a~n~~ 73 (91)
T 3bfo_A 3 KLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHET---------KKLYMVPYVDLEHQGTYWCHVYNDR 73 (91)
T ss_dssp CCEEEECCCCEEECTTSCEEEECEEECSSCCEEEEEETTEECTTCC---------SSEEEESSCCGGGCEEEEEEEECSS
T ss_pred ceEEEECCCccEecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcCC---------CCeEEECCCCHHhCEEEEEEEEcCC
Confidence 3555566667778999999999999999999999999998876543 2479999999999999999999998
Q ss_pred ceeE-EEEEEEe
Q psy12131 129 GSSQ-QFIQLSG 139 (245)
Q Consensus 129 g~~~-~~~~~~~ 139 (245)
|... ..+.+.+
T Consensus 74 g~~~s~~~~l~V 85 (91)
T 3bfo_A 74 DSQDSKKVEIII 85 (91)
T ss_dssp CEEECCCEEEEE
T ss_pred CCEEeeeEEEEE
Confidence 8644 3344444
No 392
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.47 E-value=1.1e-13 Score=86.30 Aligned_cols=78 Identities=13% Similarity=0.201 Sum_probs=67.0
Q ss_pred CCeEEeecceEEecCCCeEEEEEEEeecCC-CeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEe
Q psy12131 49 PPEVSVEKQWIHTAPDMRAEIICNVYANPP-AKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASN 126 (245)
Q Consensus 49 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 126 (245)
+|.+...+....+.+|+.+.|.|.+.+.+. +.+.|++++..+....++.+...+....|.|.++..+|.|.|+|.+.|
T Consensus 8 p~~~~~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 86 (104)
T 2eny_A 8 HVGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVFSVRG 86 (104)
T ss_dssp CCCCSBCCCCEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBCSSCEEEEETTEEEEEECSCCTTTCSCEEEEETT
T ss_pred CCEEEecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEECCEECCCCCCEEEEEcCCEEEEEECCCCHHHCEEEEEEECC
Confidence 445666667788999999999999988775 489999999998888888887777778999999999999999999865
No 393
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.47 E-value=7.6e-13 Score=96.16 Aligned_cols=129 Identities=17% Similarity=0.269 Sum_probs=82.1
Q ss_pred cceEEEe---ecceEEEeccCCCCCEEEEEEEEcCCC--CceeeEEEEEEe------cCCeEEee-cceEEecCCCeEEE
Q psy12131 2 KEIELLY---NRESLDLDRVTLKLAGLYQCIASNNIG--ESTSKNFIVNVI------YPPEVSVE-KQWIHTAPDMRAEI 69 (245)
Q Consensus 2 ~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~~~~~~~--~~~~~~~~l~v~------~~p~~~~~-~~~~~~~~g~~~~l 69 (245)
+|+.+.. +..+|.|.+++.+|+|.|+|.+.+..+ ........|.|. .+|.+... +....+..|+.+.|
T Consensus 64 ~R~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L 143 (252)
T 1oga_E 64 EGYSVSREKKESFPLTVTSAQKNPTAFYLCASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATL 143 (252)
T ss_dssp TTEEECCSSTTBCCEEECSCCSCCCEEEEEEEESSTTSCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEE
T ss_pred CcEEEEecCCCEEEEEECcCChhhCEEEEEEEecCCccceeECCCEEEEEecccCCCCCCeEEEECCChhhhccCCceEE
Confidence 4566553 235799999999999999999998521 111223456665 35665543 22223346899999
Q ss_pred EEEEeec-CC-CeEEEEECCEEeccCCcEE---EE----ecCc----eeEEEEccCCCC-CCeEEEEEEEeCCce
Q psy12131 70 ICNVYAN-PP-AKVEWFRDGTAITLGGRID---MH----VSSE----KHSLLVRHIKDT-DFGNYMCQASNNLGS 130 (245)
Q Consensus 70 ~C~~~~~-~~-~~~~w~~~~~~~~~~~~~~---~~----~~~~----~~~l~i~~~~~~-d~g~y~C~~~n~~g~ 130 (245)
.|.+.+. |. +.+.|++++..+....... .. .... .+.|.|...... +.+.|+|.+.|....
T Consensus 144 ~C~~~g~~P~~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~ 218 (252)
T 1oga_E 144 VCLATGFYPDHVELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 218 (252)
T ss_dssp EEEEEEEBSSCEEEEEEETTEEECSSEEECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred EEEEeeEcCCCcEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCC
Confidence 9999985 65 4999999998776432110 00 0111 234667665443 578999999997643
No 394
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=99.47 E-value=1.4e-10 Score=89.00 Aligned_cols=218 Identities=15% Similarity=0.088 Sum_probs=136.7
Q ss_pred ecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEe-cCCeEEeecce-EEecCCCeEEEEEEEeecCCC---eEEE
Q psy12131 9 NRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVI-YPPEVSVEKQW-IHTAPDMRAEIICNVYANPPA---KVEW 83 (245)
Q Consensus 9 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~-~~p~~~~~~~~-~~~~~g~~~~l~C~~~~~~~~---~~~w 83 (245)
+...+.|.++.+.....|+..|.+..|.. ....+... ..|. +... ........+.|.+........ .+.|
T Consensus 57 ~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s--~~~~~~~~~~~p~---p~~l~~~~~~~~si~l~W~~~~~~~i~~Y~v~~ 131 (375)
T 3t1w_A 57 DQSSCTFDNLSPGLEYNVSVYTVKDDKES--VPISDTIIPEVPQ---LTDLSFVDITDSSIGLRWTPLNSSTIIGYRITV 131 (375)
T ss_dssp TCCEEEECCCCTTCCEEEEEEEEETTEEC--CCEEEEECCCCCC---CSCCEEECCCSSEEEEECCCCCCTTEEEEEEEE
T ss_pred CccEEEEcCCcCCCEEEEEEEEEcCCCCC--CcEEeeEcCCCCC---CceEEEEecCCCeEEEEEECCCCCCceEEEEEE
Confidence 44668899999988888888888876542 22333322 2221 1111 122234566666654211111 3444
Q ss_pred EECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEE-EEEecCCCCccccCccccCCCeeEEEE
Q psy12131 84 FRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFI-QLSGIPNIPVFQKSSRRLGPDGYRLVW 162 (245)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~l~~ 162 (245)
...+.. ..............+.+.++.+.....|+..+.|..|...... .....+.+|..... ......++.|.|
T Consensus 132 ~~~~~~---~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~~~~~t~~~~p~~l~~-~~~~~~si~l~W 207 (375)
T 3t1w_A 132 VAAGEG---IPIFEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVPPPTDLRF-TNIGPDTMRVTW 207 (375)
T ss_dssp EESSSC---CSCEEEEECTTCCEEEEECCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCEEEEE-ESCCSSCEEEEE
T ss_pred EECCCC---CceeEEEcCCCcceEEEeCCCCCCEEEEEEEEEeCCcccCCeeeeeecCCCCCceeEE-EecccCEEEEEE
Confidence 433221 1112223333456788999999888889999999887644322 22223334433322 235678999999
Q ss_pred EeCCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceEEecCC
Q psy12131 163 QVDTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYVFATEG 242 (245)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~~t~~ 242 (245)
.+....++.+|.+.|+.......|......... ..+.+.+|.+++.|.|+|.|.|..|.+.++. ..+.|.+
T Consensus 208 ~~p~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~--------~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~~-~~~~t~p 278 (375)
T 3t1w_A 208 APPPSIDLTNFLVRYSPVKNEEDVAELSISPSD--------NAVVLTNLLPGTEYVVSVSSVYEQHESTPLR-GRQKTGL 278 (375)
T ss_dssp ECCSSCCCCEEEEEEEEGGGTTCCEEEEECTTC--------CEEEECSCCTTCEEEEEEEEEETTEECCCEE-EEEECCC
T ss_pred cCCCCCCccEEEEEEEeCCCCCCcEEEEcCCCc--------CEEEeCCCCCCCEEEEEEEEEcCCCcCCcee-eEEecCC
Confidence 997667889999999987644567666555443 6899999999999999999999999987654 4445555
Q ss_pred CC
Q psy12131 243 AE 244 (245)
Q Consensus 243 ~~ 244 (245)
.+
T Consensus 279 ~~ 280 (375)
T 3t1w_A 279 DS 280 (375)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 395
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.47 E-value=1.1e-12 Score=93.15 Aligned_cols=111 Identities=17% Similarity=0.243 Sum_probs=73.5
Q ss_pred cceEEecCCCeEEEEEEEeecC--CCeEEEEEC--CEEec-----------------cCCcEEEEec--CceeEEEEccC
Q psy12131 56 KQWIHTAPDMRAEIICNVYANP--PAKVEWFRD--GTAIT-----------------LGGRIDMHVS--SEKHSLLVRHI 112 (245)
Q Consensus 56 ~~~~~~~~g~~~~l~C~~~~~~--~~~~~w~~~--~~~~~-----------------~~~~~~~~~~--~~~~~l~i~~~ 112 (245)
+....+.+|+.+.|.|.+.+.+ .+.+.|+++ +..+. ...++.+... .....|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (219)
T 1c1e_H 7 SGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNL 86 (219)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSC
T ss_pred CCCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCC
Confidence 3345688999999999999865 579999985 32211 1234544332 33568999999
Q ss_pred CCCCCeEEEEEEEeCCc----eeEEEEEEEecC---CCCcccc---CccccCCCeeEEEEEeCC
Q psy12131 113 KDTDFGNYMCQASNNLG----SSQQFIQLSGIP---NIPVFQK---SSRRLGPDGYRLVWQVDT 166 (245)
Q Consensus 113 ~~~d~g~y~C~~~n~~g----~~~~~~~~~~~~---~~p~~~~---~~~~~~~~~~~l~~~~~~ 166 (245)
+.+|.|.|.|.+.|..+ .....+.+.+.. .+|.+.. ......++.+.|.|.+.+
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g 150 (219)
T 1c1e_H 87 KNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKG 150 (219)
T ss_dssp CGGGCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECCCSSSCCSSEEEEEEEEEE
T ss_pred CcccCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecCccccccCCeEEEEEEccc
Confidence 99999999999999763 111233344332 2233221 123457889999999966
No 396
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.46 E-value=3.4e-13 Score=83.41 Aligned_cols=84 Identities=19% Similarity=0.397 Sum_probs=69.6
Q ss_pred cceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEE
Q psy12131 56 KQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFI 135 (245)
Q Consensus 56 ~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 135 (245)
+....+..|+.+.|.|.+.+.| |.+.|++++..+....++.+. ...|.|.++...|.|.|.|.+.|..|.....+
T Consensus 10 p~~~~v~~G~~v~L~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~----~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~ 84 (99)
T 2cr3_A 10 VESFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAESNRTRIT----GEEVEVQDSVPADSGLYACVTSSPSGSDTTYF 84 (99)
T ss_dssp EEECCBCTTSCEEEECCCCSSC-CEEEEEESSSBCCCCSSEEEC----SSEEEETTCCTTTCEEEEEEEEETTEEEEEEE
T ss_pred CcCeEEeCCCcEEEEEEecCCC-CeEEEEECCEECCCCCcEEEE----CCEEEEccCCHHHCEEEEEEEEeCCceEEEEE
Confidence 3455678999999999999876 799999999887766655543 35899999999999999999999999988888
Q ss_pred EEEecCCCC
Q psy12131 136 QLSGIPNIP 144 (245)
Q Consensus 136 ~~~~~~~~p 144 (245)
.|.+...++
T Consensus 85 ~l~V~~~~~ 93 (99)
T 2cr3_A 85 SVNVSDALP 93 (99)
T ss_dssp EECBCSCCS
T ss_pred EEEEecCCC
Confidence 888765554
No 397
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.46 E-value=1.1e-11 Score=86.55 Aligned_cols=115 Identities=17% Similarity=0.231 Sum_probs=79.7
Q ss_pred eEEecCCCeEEEEEEEeecCCC--eEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEE
Q psy12131 58 WIHTAPDMRAEIICNVYANPPA--KVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFI 135 (245)
Q Consensus 58 ~~~~~~g~~~~l~C~~~~~~~~--~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 135 (245)
.+.+..|+++.|.|.+ +.|.| .+.|++.+..+ .+... ......|.|.+++.+|.|.|.|.+.|..+...+.+
T Consensus 16 ~v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l---~~~~~--~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~ 89 (210)
T 1gsm_A 16 VVAVALGASRQLTCRL-ACADRGASVQWRGLDTSL---GAVQS--DTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTV 89 (210)
T ss_dssp EEEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT---CCEEE--ESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred ceEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc---CcEEe--cCCccEEEECccCcccCceEEEEEEeCCCceEEEE
Confidence 3578899999999999 88888 99999854332 12211 23456899999999999999999999988877766
Q ss_pred EEEec--CCCCccccCccccCCCeeEEEEEeCCCCCc----eEEEEEEEeec
Q psy12131 136 QLSGI--PNIPVFQKSSRRLGPDGYRLVWQVDTYSGI----IQYLLKFRERE 181 (245)
Q Consensus 136 ~~~~~--~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~~~~ 181 (245)
.|.+. |..+..... ....++.+ |+|.+.+..|. ..+. |+++..
T Consensus 90 ~ltV~~~P~~~~i~~~-~~~~g~~~-l~C~a~g~~P~~~~~lti~-Wlk~~~ 138 (210)
T 1gsm_A 90 QLLVYAFPNQLTVSPA-ALVPGDPE-VACTAHKVTPVDPNALSFS-LLVGGQ 138 (210)
T ss_dssp EEEEEBCCSEEEEESS-SBCTTCCE-EEEEEEEEBCCCTTTEEEE-EEETTE
T ss_pred EEEEEecCCCcEEccc-eEEeCCce-EEEEeCCCCCCCCCCcEEE-EEECCE
Confidence 66654 322222222 34556777 99999665443 2333 555544
No 398
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.46 E-value=2.3e-13 Score=84.85 Aligned_cols=74 Identities=18% Similarity=0.366 Sum_probs=65.5
Q ss_pred CCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEE
Q psy12131 49 PPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQ 123 (245)
Q Consensus 49 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 123 (245)
+|.+...+....+.+|+.+.|.|.+.+.|.+ +.|++++..+....++.+...+....|.|.++..+|.|.|.|.
T Consensus 8 pp~~~~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 81 (103)
T 2e7b_A 8 PVRFQEALKDLEVLEGGAATLRCVLSSVAAP-VKWCYGNNVLRPGDKYSLRQEGAMLELVVRNLRPQDSGRYSCS 81 (103)
T ss_dssp CCCCTBCCCCEEEESSSCEEEEEECSSCCCS-CEEEESSSBCCCSSSEEEEECSSEEEEEECSCCTTTCCCEEEE
T ss_pred CCEEEecCccEEEECCCcEEEEEEEeCCCCC-eEEEECCEECCCCCcEEEEEcCCEEEEEEccCCcccCEEEEEE
Confidence 5666666677888999999999999999888 9999999988877788887777778899999999999999998
No 399
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.46 E-value=2.3e-13 Score=96.82 Aligned_cols=177 Identities=12% Similarity=0.037 Sum_probs=103.3
Q ss_pred eEEecCCCeEEEEEEEee-cCCC----eEEEEECCEEec-------------cCCcEEEEe-----cCceeEEEEccCCC
Q psy12131 58 WIHTAPDMRAEIICNVYA-NPPA----KVEWFRDGTAIT-------------LGGRIDMHV-----SSEKHSLLVRHIKD 114 (245)
Q Consensus 58 ~~~~~~g~~~~l~C~~~~-~~~~----~~~w~~~~~~~~-------------~~~~~~~~~-----~~~~~~l~i~~~~~ 114 (245)
.+.+..|+.+.|.|.+.+ .+.+ .+.|++++.... ...++.+.. ......|.|.+++.
T Consensus 8 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~ 87 (221)
T 3eow_R 8 QVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLRV 87 (221)
T ss_dssp CCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCSSC
T ss_pred cEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccCCh
Confidence 456778999999999954 3433 499999753211 123344433 12356899999999
Q ss_pred CCCeEEEEEEEeCC-ceeEEEEEEEecCCCCccccC--ccccCCCee-EEEEEeC-CCCCceEEEEEEEeecCCCCeEEE
Q psy12131 115 TDFGNYMCQASNNL-GSSQQFIQLSGIPNIPVFQKS--SRRLGPDGY-RLVWQVD-TYSGIIQYLLKFREREELTPWRNI 189 (245)
Q Consensus 115 ~d~g~y~C~~~n~~-g~~~~~~~~~~~~~~p~~~~~--~~~~~~~~~-~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 189 (245)
+|.|.|.|.+.+.. +.....+.|.+.. +|.+... .....+..+ .|.|.+. +.++. . ..|+++.. +......
T Consensus 88 ~D~G~Y~C~~~~~~~~~~~~~~~L~V~~-~P~~~~~~~~~~~~g~~~~~l~C~~~~g~P~p-~-v~W~k~~~-~~~~~~~ 163 (221)
T 3eow_R 88 EDEGSYTCLFVTFPQGSRSVDIWLRVLA-KPQNTAEVQKVQLTGEPVPMARCVSTGGRPPA-Q-ITWHSDLG-GMPQTSQ 163 (221)
T ss_dssp CCCSCBEEEEEESSSCSCEEECCCCCCC-CCEEEEEEECCCCCSSSCCEEEEEEESCSSCC-C-EEEECSSS-CCCCCEE
T ss_pred HHCeEEEEEEEeCCCCceEEEEEEEEEE-CCCceeecCCcccCCceEEEEEEECCCccCCC-e-eEEEeCCC-CCCccce
Confidence 99999999999976 6666666666554 3332211 112456677 5999985 44332 2 23444432 1111111
Q ss_pred eeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceEEecCC
Q psy12131 190 VIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYVFATEG 242 (245)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~~t~~ 242 (245)
...... ........+.|......+...|+|.|.|..+.... .+.+.-.+
T Consensus 164 ~~~~~~--~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~--~~~v~~~~ 212 (221)
T 3eow_R 164 VPGFLS--GTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQ--LLTVSLTV 212 (221)
T ss_dssp ECCCCB--TTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCE--EEEECCCC
T ss_pred eecCCC--CcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCe--EEEEEEEE
Confidence 111111 11111245777777766666777779999876433 34444444
No 400
>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.46 E-value=4.4e-13 Score=85.99 Aligned_cols=97 Identities=18% Similarity=0.252 Sum_probs=73.6
Q ss_pred cCCCCccccCccccCCCeeEEEEEeCC---CCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCce
Q psy12131 140 IPNIPVFQKSSRRLGPDGYRLVWQVDT---YSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQ 216 (245)
Q Consensus 140 ~~~~p~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~ 216 (245)
.|.+|............++.|.|.+.. +.++.+|.|+++.......|..+..... ..+.+.+|.+++.
T Consensus 17 ~P~~P~~~~~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~~~~~~~~~~~---------~~~~v~~L~p~t~ 87 (120)
T 2crm_A 17 KPGIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIYSGAT---------REHLCDRLNPGCF 87 (120)
T ss_dssp CCCCCCCCEEEEEEETTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEEECSSC---------SEEEECSCCTTSC
T ss_pred CCCCCCCCEEeeccCCCEEEEEECCCCcCCCCeeeEEEEEEccCCCCcCCEEEEeccc---------cEEEECCCCCCCE
Confidence 344444333222355779999999832 3478999999998753357877644221 6799999999999
Q ss_pred EEEEEEEEecCCCCCCCcceEEecCCCCC
Q psy12131 217 YEASVLAKNRFGWSRPSKAYVFATEGAET 245 (245)
Q Consensus 217 y~~~v~a~N~~G~~~~s~~~~~~t~~~~~ 245 (245)
|.|||.|.|..|.|.+|..+.++|.+.+|
T Consensus 88 Y~frV~A~n~~G~s~~S~~~~~~T~~~~p 116 (120)
T 2crm_A 88 YRLRVYCISDGGQSAVSESLLVQTPAVSG 116 (120)
T ss_dssp EEEEEEEEETTEECCCCCCCCCCCCCCSC
T ss_pred EEEEEEEEcCCccCCCcccEEEEcCCCCC
Confidence 99999999999999999999999987654
No 401
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.46 E-value=1.2e-12 Score=89.39 Aligned_cols=150 Identities=13% Similarity=0.149 Sum_probs=88.5
Q ss_pred eEEecCCCeEEEEEEEeecCCCeEEEEECCEEecc------------CCcEEEEecCceeEEEEccCCCCCCeEEEEEEE
Q psy12131 58 WIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITL------------GGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQAS 125 (245)
Q Consensus 58 ~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~------------~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 125 (245)
.+.+..|++++|.|.+. .|.+.+.|++++..+.. ..+..+ ...+..|.|.+++..|.|.|.|.+.
T Consensus 4 ~v~~~~G~~VtL~c~~~-~~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~--~~~~~sL~I~~v~~~DsG~Y~C~~~ 80 (171)
T 1ccz_A 4 QIYGVVYGNVTFHVPSN-VPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYL--DTVSGSLTIYNLTSSDEDEYEMESP 80 (171)
T ss_dssp EEEEETTCCEEECCCCS-SCCSCEEEEETTEEEEEEETTEEEECGGGTTSEEE--CTTTCCEEECSCCGGGCEEEEEECT
T ss_pred EEEEEcCCCEEEcCCCC-CCcceEEEEeCCcEEEEEcCCCcccccccCCcEEE--eCCCCeEEECCCChhhCceEEEEEe
Confidence 45678999999999985 47789999998764321 112222 2234589999999999999999999
Q ss_pred eCCceeEEEEEEEecCCCCccccCccccCCCeeEEEEEeCCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeE
Q psy12131 126 NNLGSSQQFIQLSGIPNIPVFQKSSRRLGPDGYRLVWQVDTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQS 205 (245)
Q Consensus 126 n~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (245)
|..|.....+.+...+..|.+..... ...|.|.+.+.+++ .|. |+++.. .... ... ..
T Consensus 81 n~~~~~~~~L~V~~~~~~p~i~~~~~-----~~~L~C~~~~~p~p-~i~-W~~~~~---~l~~---~~~---------~~ 138 (171)
T 1ccz_A 81 NITDTMKFFLYVLEMVSKPMIYWECS-----NATLTCEVLEGTDV-ELK-LYQGKE---HLRS---LRQ---------KT 138 (171)
T ss_dssp TCCSCEEEEEEEECCCCCCEEEEETT-----TTEEEEECSSCSSC-EEE-EEETTE---EEEE---ESS---------SE
T ss_pred CCCCcEEEEEEEECcCCCCEEEEecC-----CcEEEEEeCCCCCc-EEE-EEECCE---ECcC---Ccc---------eE
Confidence 98873333344433333343332111 13799999765432 333 444322 1111 011 23
Q ss_pred EEecCCCCCceEEEEEEEEecCCCCCCCc
Q psy12131 206 YNITGLQLFTQYEASVLAKNRFGWSRPSK 234 (245)
Q Consensus 206 ~~i~~l~~~~~y~~~v~a~N~~G~~~~s~ 234 (245)
+.+......+.| +|.|.|.+|....+.
T Consensus 139 l~~~~~~~~g~Y--~C~a~N~~~~~~~~~ 165 (171)
T 1ccz_A 139 MSYQWTNLRAPF--KCKAVNRVSQESEME 165 (171)
T ss_dssp EEEECSCCSSCE--EEEEEETTEEEEEEE
T ss_pred EEEeccCCCceE--EEEEEcccCccccee
Confidence 334333333355 555999998754433
No 402
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.46 E-value=1.4e-12 Score=82.63 Aligned_cols=80 Identities=18% Similarity=0.316 Sum_probs=65.6
Q ss_pred EecCCeEEeecce---EEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEE
Q psy12131 46 VIYPPEVSVEKQW---IHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMC 122 (245)
Q Consensus 46 v~~~p~~~~~~~~---~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 122 (245)
|..+|.+...+.. +.+..|+.+.|.|.+. .|.+.+.|++++..+....++.+...+....|.|.++..+|.|.|.|
T Consensus 7 v~~pp~~~~~p~~~~~~~~~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 85 (113)
T 2cpc_A 7 GTDVSSWIVYPSGKVYVAAVRLERVVLTCELC-RPWAEVRWTKDGEEVVESPALLLQKEDTVRRLVLPAVQLEDSGEYLC 85 (113)
T ss_dssp CCSCSCSEEESCSCEEEEEETTCCEEEEEEES-CTTCCCEEEETTEECCCBTTBEEEECSSEEEEEESSCCTTTCEEEEE
T ss_pred cccCCcEEEccCCceeEEEEcCCeEEEEEEec-CCCCeEEEEECCEECccCCCEEEEECCCEEEEEECCCCcccCEEEEE
Confidence 3455555444433 5677999999999995 78889999999999887777777766666799999999999999999
Q ss_pred EEEe
Q psy12131 123 QASN 126 (245)
Q Consensus 123 ~~~n 126 (245)
.+.|
T Consensus 86 ~a~n 89 (113)
T 2cpc_A 86 EIDD 89 (113)
T ss_dssp ESSS
T ss_pred EEec
Confidence 9999
No 403
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.46 E-value=1e-12 Score=81.82 Aligned_cols=93 Identities=16% Similarity=0.260 Sum_probs=72.6
Q ss_pred CCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCC
Q psy12131 49 PPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNL 128 (245)
Q Consensus 49 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 128 (245)
+|.+...+....+.+|+.+.|.|. .+.|.+.+.|++++..+....++.+...+....|.|.++..+|.|.|+|.+ ..
T Consensus 8 pp~~~~~~~~~~v~~G~~v~l~C~-~~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~--g~ 84 (103)
T 2dku_A 8 ANCFTEELTNLQVEEKGTAVFTCK-TEHPAATVTWRKGLLELRASGKHQPSQEGLTLRLTISALEKADSDTYTCDI--GQ 84 (103)
T ss_dssp CCCCSSCCCCEEEETTSEEEEEEE-CSSCCSCCEEEESSCBCCSSSSEEEEEETTEEEEEEESCCTTTCSEEEEEC--SS
T ss_pred CCEeEecCCcEEEeCCCcEEEEEE-eCCCCCeEEEEeCCEECCCCCeEEEEeCCCEEEEEECCCCcccCEEEEEEe--CC
Confidence 566666677788899999999999 578889999999999888777887776666778999999999999999982 22
Q ss_pred ceeEEEEEEEecCCCC
Q psy12131 129 GSSQQFIQLSGIPNIP 144 (245)
Q Consensus 129 g~~~~~~~~~~~~~~p 144 (245)
......+.+...|.+|
T Consensus 85 ~~~~~~l~V~~~p~~p 100 (103)
T 2dku_A 85 AQSRAQLLVQGRRSGP 100 (103)
T ss_dssp CBCCEEEEEECSCCCC
T ss_pred ceEEEEEEEeCccCCC
Confidence 2233455555555554
No 404
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.46 E-value=3.9e-11 Score=86.54 Aligned_cols=182 Identities=9% Similarity=0.130 Sum_probs=101.3
Q ss_pred EEeecceEEecCCCeEEEEEEEeec--CCCeEEEEECC--E---Eec--------------cCCcEEEEecC--ceeEEE
Q psy12131 52 VSVEKQWIHTAPDMRAEIICNVYAN--PPAKVEWFRDG--T---AIT--------------LGGRIDMHVSS--EKHSLL 108 (245)
Q Consensus 52 ~~~~~~~~~~~~g~~~~l~C~~~~~--~~~~~~w~~~~--~---~~~--------------~~~~~~~~~~~--~~~~l~ 108 (245)
+...+..+.+.+|+.+.|.|.+.+. +.+.+.|++.. . .+. ...++.+.... ....|.
T Consensus 4 v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 83 (242)
T 1hxm_B 4 LEQPQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLT 83 (242)
T ss_dssp EECCCSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEE
T ss_pred cCcCCceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEE
Confidence 4445667788899999999999875 56789999832 1 110 23455554322 467899
Q ss_pred EccCCCCCCeEEEEEEEeCCc-----e----eEEEEEEEecCC----CCc---cccC-ccccCCCeeEEEEEeCCCCCce
Q psy12131 109 VRHIKDTDFGNYMCQASNNLG-----S----SQQFIQLSGIPN----IPV---FQKS-SRRLGPDGYRLVWQVDTYSGII 171 (245)
Q Consensus 109 i~~~~~~d~g~y~C~~~n~~g-----~----~~~~~~~~~~~~----~p~---~~~~-~~~~~~~~~~l~~~~~~~~~~~ 171 (245)
|.+++.+|.|.|.|.+.+... . ....+.+...+. +|. +... .....++.+.|.|.+.+..|..
T Consensus 84 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~~~g~~v~L~C~~~g~~P~~ 163 (242)
T 1hxm_B 84 IHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDV 163 (242)
T ss_dssp ECSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGGGSSSCEEEEEEEEEESSCC
T ss_pred ECCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhcccCCCceEEEEEeeEECCC
Confidence 999999999999999998531 1 112334433221 221 1111 1223578999999996543321
Q ss_pred EEEEEEEeecCC--CCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceEE
Q psy12131 172 QYLLKFREREEL--TPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYVF 238 (245)
Q Consensus 172 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~ 238 (245)
-...|+++.... ...........+ .-.....+.|........| .|.|.|..|....+..+.+
T Consensus 164 ~~v~W~~~~~~~l~~~~~~~~~~~~~---~~~~~s~L~i~~~~~~g~y--~C~v~n~~~~~~~~~~~~~ 227 (242)
T 1hxm_B 164 IKIHWEEKKSNTILGSQEGNTMKTND---TYMKFSWLTVPEKSLDKEH--RCIVRHENNKNGVDQEIIF 227 (242)
T ss_dssp EEEEEEESSSCCCCCCEECCCEECSS---SEEEEEEEEECTGGGGSCE--EEEEEETTSGGGSCEEEEE
T ss_pred eEEEEEcCCCEeecCccccceecCCC---cEEEEEEEEEccccCCCEE--EEEEEeCCCCCCceeEeec
Confidence 122344443200 000000000110 0011235666655543455 5559999987766655554
No 405
>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.46 E-value=1.9e-13 Score=86.98 Aligned_cols=83 Identities=14% Similarity=0.202 Sum_probs=67.0
Q ss_pred ccCCCeeEEEEEeCCC------CC-ceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEE
Q psy12131 152 RLGPDGYRLVWQVDTY------SG-IIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAK 224 (245)
Q Consensus 152 ~~~~~~~~l~~~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~ 224 (245)
....+++.|.|.++.+ .+ +..|.|+ +.......|..+..... ..+++.+|.+++.|.|||+|.
T Consensus 26 ~vt~~Sv~LsW~~p~~~g~~~g~~~I~~Y~ve-~~~~~~~~~~~v~~~~~---------t~~~v~gL~p~t~Y~frV~A~ 95 (120)
T 1wfu_A 26 KVTHHSIELYWDLEQKEKRQGPQEQWLRFSIE-EEDPKMHSYGVIYTGYA---------TRHVVEGLEPRTLYKFRLKVT 95 (120)
T ss_dssp CEETTEEEEECTTTSCSCCCSCGGGCCEEEEE-EECTTTCCEEEEEEESC---------SEEEEESCCTTCEEEEEEEEE
T ss_pred eEECCEEEEEECCCccCCccCCCCceEEEEEE-EecCCCCceEEEecCCc---------cEEEECCCCCCCEEEEEEEEE
Confidence 4678899999998332 24 8899999 44334677877654322 569999999999999999999
Q ss_pred ecCCCCCCCcceEEecCCCC
Q psy12131 225 NRFGWSRPSKAYVFATEGAE 244 (245)
Q Consensus 225 N~~G~~~~s~~~~~~t~~~~ 244 (245)
|..|.|.+|..+.++|...|
T Consensus 96 n~~G~s~~S~~~~~~T~~~p 115 (120)
T 1wfu_A 96 SPSGEYEYSPVVSVATTRES 115 (120)
T ss_dssp CSSSCEEECCCEEEECCCCC
T ss_pred CCCCCCCCCccEeeEcCCCC
Confidence 99999999999999998864
No 406
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.46 E-value=4.2e-12 Score=93.81 Aligned_cols=169 Identities=12% Similarity=0.153 Sum_probs=101.2
Q ss_pred cceEEecCCCeEEEEEEEeecC--CCeEEEEECC--EEe-----------------ccCCcEEEEe--cCceeEEEEccC
Q psy12131 56 KQWIHTAPDMRAEIICNVYANP--PAKVEWFRDG--TAI-----------------TLGGRIDMHV--SSEKHSLLVRHI 112 (245)
Q Consensus 56 ~~~~~~~~g~~~~l~C~~~~~~--~~~~~w~~~~--~~~-----------------~~~~~~~~~~--~~~~~~l~i~~~ 112 (245)
+....+.+|+.+.|.|.+.+.+ .+.+.|++.. ... ....++.+.. ......|.|.++
T Consensus 33 p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 112 (282)
T 1qok_A 33 SGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLSSL 112 (282)
T ss_dssp CCCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEECSC
T ss_pred CCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEECcC
Confidence 4456788999999999998775 5789999843 111 0124555543 234578999999
Q ss_pred CCCCCeEEEEEEEeCCc---e--eEE--EEEEEecC------------CCCcccc---CccccCCCeeEEEEEeCCCCCc
Q psy12131 113 KDTDFGNYMCQASNNLG---S--SQQ--FIQLSGIP------------NIPVFQK---SSRRLGPDGYRLVWQVDTYSGI 170 (245)
Q Consensus 113 ~~~d~g~y~C~~~n~~g---~--~~~--~~~~~~~~------------~~p~~~~---~~~~~~~~~~~l~~~~~~~~~~ 170 (245)
+.+|.|.|.|.+.|..| . ... .+.+...+ .++.+.. ......++.+.|.|...+.++
T Consensus 113 ~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~- 191 (282)
T 1qok_A 113 TSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSASSSVS- 191 (282)
T ss_dssp CGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEEEESSCCS-
T ss_pred ChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEEecCCCc-
Confidence 99999999999999865 1 111 33333322 1222211 123567899999999966543
Q ss_pred eEEEEEEEeec-CCCCeEEEee----CCCCCCC---cceeeeEEEecCCCCCceEEEEEEEEecC
Q psy12131 171 IQYLLKFRERE-ELTPWRNIVI----PSDGSLA---GPIYTQSYNITGLQLFTQYEASVLAKNRF 227 (245)
Q Consensus 171 ~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~---~~~~~~~~~i~~l~~~~~y~~~v~a~N~~ 227 (245)
...||+... ....+..... ....... .......+.|.++...+...|.|.|.|..
T Consensus 192 --~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~ 254 (282)
T 1qok_A 192 --YMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSY 254 (282)
T ss_dssp --CCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSS
T ss_pred --eEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeCC
Confidence 234566421 1111110000 0000000 00113578999999999999999999853
No 407
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.46 E-value=2e-13 Score=95.96 Aligned_cols=155 Identities=14% Similarity=0.150 Sum_probs=91.8
Q ss_pred ecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEEEEEe-
Q psy12131 61 TAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSG- 139 (245)
Q Consensus 61 ~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~~~~- 139 (245)
+..|+.+.|.|.+ |.+.+.|++++..+... ......|.|.++..+|.|.|+|.+.+..+ ....+.+..
T Consensus 15 ~~~G~~v~L~C~~---p~~~i~W~k~g~~l~~~-------~~~~~~L~i~~v~~~DsG~Y~C~~~~~~s-~~~~v~v~~~ 83 (204)
T 1sy6_A 15 YQEDGSVLLTCDA---EAKNITWFKDGKMIGFL-------TEDKKKWNLGSNAKDPRGMYQCKGSQNKS-KPLQVYYRMG 83 (204)
T ss_dssp CCSSSEEEEEECS---CSSEEEEEETTEEEEEE-------ESSCCCEEEEEGGGCCEEEEEEESSSSCC-CCEEEEEEC-
T ss_pred ecCCCeEEEEEcC---CCCEEEEEECCEECCCC-------CCCCCeEEeCCCCcCCCEEEEEEecCCCC-eeEEEEEEEe
Confidence 3579999999998 78899999999876532 11345799999999999999999766432 222222220
Q ss_pred -----c-------------------C---CCCcccc-Cccc-cCCCeeEEEEEeCCCCCceEEEEEEEeecCCCCeEEEe
Q psy12131 140 -----I-------------------P---NIPVFQK-SSRR-LGPDGYRLVWQVDTYSGIIQYLLKFREREELTPWRNIV 190 (245)
Q Consensus 140 -----~-------------------~---~~p~~~~-~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (245)
. . .++.+.. .... ..|+.+.|.|. +.+.. . ..|+++.. .+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~G~~v~L~C~--g~p~p-~-i~W~k~~~------~l~ 153 (204)
T 1sy6_A 84 SADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPYKVSISGTTVILTCP--QYPGS-E-ILWQHNDK------NIG 153 (204)
T ss_dssp -----------------------------------CCCCEEEEETTEEEEECS--CCCSS-C-EEEEETTE------EES
T ss_pred ccccccccccccccccccccccccccccccccceecCCceeeecCCcEEEEcC--CCCCC-c-eEEEECCE------ECC
Confidence 0 0 0111111 1122 37899999999 33222 2 23444432 000
Q ss_pred eCCCCCCCcceeeeEEEecCC-CCCceEEEEEEEEecCCCCCCCcceEE
Q psy12131 191 IPSDGSLAGPIYTQSYNITGL-QLFTQYEASVLAKNRFGWSRPSKAYVF 238 (245)
Q Consensus 191 ~~~~~~~~~~~~~~~~~i~~l-~~~~~y~~~v~a~N~~G~~~~s~~~~~ 238 (245)
...... .-......|.|.++ ...+.+.|+|.|.|..|.. .+..+.+
T Consensus 154 ~~~~~~-~~~~~~~~L~I~~v~~~~D~G~Y~C~A~N~~g~~-~s~~l~l 200 (204)
T 1sy6_A 154 GDEDDK-NIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPED-ANFYLYL 200 (204)
T ss_dssp CCTTCT-TEEEETTEEEETTCCHHHHCEEEEEEETTSCGGG-SSCEEEE
T ss_pred CccCCc-eEecCCCEEEEeeCCccccCEEEEEEeccCCCCc-eeEEEEE
Confidence 000000 00001257899999 8888999999999999963 3444443
No 408
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.45 E-value=7.8e-13 Score=94.64 Aligned_cols=122 Identities=12% Similarity=0.237 Sum_probs=78.7
Q ss_pred cceEEecCCCeEEEEEEEeecCC-CeEEEEECCEE-----ec----cCCcE--EEE----------ecCceeEEEEccCC
Q psy12131 56 KQWIHTAPDMRAEIICNVYANPP-AKVEWFRDGTA-----IT----LGGRI--DMH----------VSSEKHSLLVRHIK 113 (245)
Q Consensus 56 ~~~~~~~~g~~~~l~C~~~~~~~-~~~~w~~~~~~-----~~----~~~~~--~~~----------~~~~~~~l~i~~~~ 113 (245)
+..+.+.+|+.+.|.|.+.+.+. +.+.|++++.. +. ....+ .+. .. ....|.|.++.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~-~~~~L~i~~v~ 85 (231)
T 2pet_A 7 PPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLD-SQGRLVLAEAQ 85 (231)
T ss_dssp CSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEEC-TTCCEEESSCC
T ss_pred CCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccC-CCceEEEcccC
Confidence 44567889999999999998885 89999975432 11 11111 111 11 22349999999
Q ss_pred CCCCeEEEEEEEeCC-ceeEEEEEEEe--cCCCCccccCc---cccCCCee-EEEEEe-CCCCCceEEEEEEEee
Q psy12131 114 DTDFGNYMCQASNNL-GSSQQFIQLSG--IPNIPVFQKSS---RRLGPDGY-RLVWQV-DTYSGIIQYLLKFRER 180 (245)
Q Consensus 114 ~~d~g~y~C~~~n~~-g~~~~~~~~~~--~~~~p~~~~~~---~~~~~~~~-~l~~~~-~~~~~~~~~~~~~~~~ 180 (245)
.+|.|.|.|.+.+.. +.....+.+.+ .|..|.+.... ....+..+ .|.|.+ .+.++. .+ .|+++.
T Consensus 86 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p-~i-~W~~~~ 158 (231)
T 2pet_A 86 VGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAP-KI-TWYRNG 158 (231)
T ss_dssp GGGCEEEEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCC-EE-EEEETT
T ss_pred cccCceEEEEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCC-EE-EEEECC
Confidence 999999999999986 66666655554 44445443332 23466666 999998 555433 22 355543
No 409
>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.45 E-value=1.8e-13 Score=85.27 Aligned_cols=81 Identities=22% Similarity=0.228 Sum_probs=66.9
Q ss_pred CCCeeEEEEEe--CCCCCceEEEEEEEeecCCCCeEEEeeC-CCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCC
Q psy12131 154 GPDGYRLVWQV--DTYSGIIQYLLKFREREELTPWRNIVIP-SDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWS 230 (245)
Q Consensus 154 ~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~ 230 (245)
..+++.|+|.+ .+++++.+|.|+|+. . ...|..+... ... ...+.+.+|.++..|.|||.|.|..|.|
T Consensus 19 ~~~sv~L~W~pP~~~~~~I~gY~vey~~-~-~~~W~~~~~~~~~~-------~t~~~v~~L~pg~~Y~FRV~A~n~~G~s 89 (108)
T 1v5j_A 19 TPRGVLLHWDPPELVPKRLDGYVLEGRQ-G-SQGWEVLDPAVAGT-------ETELLVPGLIKDVLYEFRLVAFAGSFVS 89 (108)
T ss_dssp CSSSEEEEEECCSCCSSCCCBEEEEEEE-T-TCCCEEEEEEECSS-------CCEEECCCCCTTSCEECCBEEEETTEEE
T ss_pred eCCEEEEEECCCCCCCCCCcEEEEEEEe-C-CCCcEEeeeecCCC-------cCEEEeCCCCCCCEEEEEEEEEcCCCCc
Confidence 35689999998 455789999999998 3 5679865431 111 2789999999999999999999999999
Q ss_pred CCCcceEEecCCC
Q psy12131 231 RPSKAYVFATEGA 243 (245)
Q Consensus 231 ~~s~~~~~~t~~~ 243 (245)
.+|+.+.++|.+.
T Consensus 90 ~pS~~~~v~T~~~ 102 (108)
T 1v5j_A 90 DPSNTANVSTSGL 102 (108)
T ss_dssp EECSCCCCCCSSC
T ss_pred CCCCCEEEEeCCc
Confidence 9999999999874
No 410
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.45 E-value=2.8e-13 Score=95.75 Aligned_cols=170 Identities=13% Similarity=0.068 Sum_probs=96.6
Q ss_pred cceEEecCCCeEEEEEEEeecCCCeEEEEEC--CEEec------------cCCcEEEEecCceeEEEEccCCCCCCeEEE
Q psy12131 56 KQWIHTAPDMRAEIICNVYANPPAKVEWFRD--GTAIT------------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYM 121 (245)
Q Consensus 56 ~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~--~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~ 121 (245)
+....+.+|+.+.|.|.+.+.+.+.+.|+++ +..+. ...++.+...+....|.|.++..+|.|.|.
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 85 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYY 85 (212)
T ss_dssp CSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEE
T ss_pred CCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEE
Confidence 4566788999999999988887788999984 22221 134566555556678999999999999999
Q ss_pred EEEEeC-Ccee--E--EEEEEEecC-CCCccccC---ccccCCCeeEEEEEeCCCCCc-eEEEEEEEeec--CCCCeEEE
Q psy12131 122 CQASNN-LGSS--Q--QFIQLSGIP-NIPVFQKS---SRRLGPDGYRLVWQVDTYSGI-IQYLLKFRERE--ELTPWRNI 189 (245)
Q Consensus 122 C~~~n~-~g~~--~--~~~~~~~~~-~~p~~~~~---~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~ 189 (245)
|.+.|. .+.. . ..+.+...+ .+|.+... .....+..+.|.|.+.+..|. ..+ .|+++.. ........
T Consensus 86 C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v-~W~k~g~~~~~~~~~~~ 164 (212)
T 1nfd_E 86 CLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATV-TWKANGATINDGVKTTK 164 (212)
T ss_dssp EEEEETTTTEEEECCCEEEEEECCCCBCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEE-EEEETTEEECSSCBCCC
T ss_pred EEEEcccCcccccCCceEEEEccCCCCCCEEEeeCCchHhccCCceEEEEEEEeeECCccEE-EEEECCeEcCCCeecCC
Confidence 999973 2211 1 233333222 33433321 123457799999999654222 222 3444432 01100000
Q ss_pred eeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCC
Q psy12131 190 VIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGW 229 (245)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~ 229 (245)
..... ..-.....+.|..+...+...|+|.|.|..+.
T Consensus 165 ~~~~~---~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (212)
T 1nfd_E 165 PSKQG---QNYMTSSYLSLTADQWKSHNRVSCQVTHEGET 201 (212)
T ss_dssp CBCSS---SCEEEEEBCCEEHHHHHTCSCEEEEEECTTTT
T ss_pred ceecC---CCceEEEEEEEchhhcCCCCeEEEEEEeCCce
Confidence 00000 00000123455555544455556669999765
No 411
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.45 E-value=9.3e-13 Score=80.74 Aligned_cols=74 Identities=23% Similarity=0.382 Sum_probs=64.3
Q ss_pred CeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEE
Q psy12131 50 PEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQA 124 (245)
Q Consensus 50 p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 124 (245)
|.+...+....+.+|+.+.|.|.+ +.|.+.+.|++++..+....++.+...+....|.|.++..+|.|.|.|.+
T Consensus 9 ~~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 82 (95)
T 2k1m_A 9 SAFSKKPRSVEVAAGSPAVFEAET-ERAGVKVRWQRGGSDISASNKYGLATEGTRHTLTVREVGPADQGSYAVIA 82 (95)
T ss_dssp CCCSBCCCCEEEETTSCEEEEEEC-SSSSCCCEEECSSSEECSSTTCEEEEETTEEEEEESSCCTTCCSEEEEEE
T ss_pred CeeEeCCCcEEEeCCCcEEEEEEe-CCCCCeEEEEECCEECCCCCcEEEEEcCCEEEEEEcCCCcccCEEEEEEE
Confidence 445555667788999999999999 78888999999999888777887777777789999999999999999999
No 412
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.45 E-value=7e-14 Score=100.73 Aligned_cols=119 Identities=13% Similarity=0.102 Sum_probs=78.4
Q ss_pred ceEEEeccCCCCCEEEEEEEEcCCCCc-eeeEEEE--EEecCCeEEeecceEEecCCCeEEEEEEEeec-CC-CeEEEEE
Q psy12131 11 ESLDLDRVTLKLAGLYQCIASNNIGES-TSKNFIV--NVIYPPEVSVEKQWIHTAPDMRAEIICNVYAN-PP-AKVEWFR 85 (245)
Q Consensus 11 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~~l--~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~~-~~~~w~~ 85 (245)
+.|.|.+++.+|+|.|+|.+.+..+.. ..+.+.+ .+..+|.+...+.......|+.+.|.|.+.|. |. ..+.|++
T Consensus 82 s~L~I~~~~~~D~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k 161 (239)
T 1i1c_A 82 SELPIVERDWLNGKTFKCKVNSGAFPAPIEKSISKPEGTPRGPQVYTMAPPKEEMTQSQVSITCMVKGFYPPDIYTEWKM 161 (239)
T ss_dssp EEEECCHHHHHTTCCEEEEEECSSSSSCEEEEECCCSSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEE
T ss_pred EEEEEEhhHccCCCeEEEEEecccCCCCcEEEEecCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeeeECCCeEEEEEE
Confidence 469999999999999999999987752 2233333 34467777655433323357899999999984 44 3899999
Q ss_pred CCEEeccCCcEEE-EecCc----eeEEEEccCCCCCCeEEEEEEEeCCc
Q psy12131 86 DGTAITLGGRIDM-HVSSE----KHSLLVRHIKDTDFGNYMCQASNNLG 129 (245)
Q Consensus 86 ~~~~~~~~~~~~~-~~~~~----~~~l~i~~~~~~d~g~y~C~~~n~~g 129 (245)
++..+........ ...+. .+.|.|......+.|.|+|.+.|...
T Consensus 162 ~g~~l~~~~~~~~~~~~dgt~~~~s~l~v~~~~~~~~g~YtC~v~n~~l 210 (239)
T 1i1c_A 162 NGQPQENYKNTPPTMDTDGSYFLYSKLNVKKETWQQGNTFTCSVLHEGL 210 (239)
T ss_dssp TTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred CCEECCCceecCceECCCCCEEEEEEEEEChhhcCCCCEEEEEEECCCC
Confidence 9987743211111 11111 12344444444568999999999764
No 413
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.45 E-value=6.2e-12 Score=92.77 Aligned_cols=171 Identities=14% Similarity=0.124 Sum_probs=99.7
Q ss_pred cceEEecCCCeEEEEEEEeec--CCCeEEEEECC--EEe-----------------ccCCcEEEE--ecCceeEEEEccC
Q psy12131 56 KQWIHTAPDMRAEIICNVYAN--PPAKVEWFRDG--TAI-----------------TLGGRIDMH--VSSEKHSLLVRHI 112 (245)
Q Consensus 56 ~~~~~~~~g~~~~l~C~~~~~--~~~~~~w~~~~--~~~-----------------~~~~~~~~~--~~~~~~~l~i~~~ 112 (245)
+..+.+.+|+.+.|.|.+.+. +.+.+.|++.. ... ....++.+. .......|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (280)
T 3fku_X 7 SGAEVKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRSL 86 (280)
T ss_dssp CCCCEECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECSC
T ss_pred CCCEEECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECCC
Confidence 456678899999999999875 55789998732 100 011345544 2334568999999
Q ss_pred CCCCCeEEEEEEEeC---------CceeEEEEEEEecC--------------CCCccccC--ccccCCCeeEEEEEeCCC
Q psy12131 113 KDTDFGNYMCQASNN---------LGSSQQFIQLSGIP--------------NIPVFQKS--SRRLGPDGYRLVWQVDTY 167 (245)
Q Consensus 113 ~~~d~g~y~C~~~n~---------~g~~~~~~~~~~~~--------------~~p~~~~~--~~~~~~~~~~l~~~~~~~ 167 (245)
..+|.|.|.|.+.+. .........|.+.+ .++.+... .....+++++|.|...+.
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~v~~G~~v~L~C~~~~~ 166 (280)
T 3fku_X 87 RSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPPSVSKGLRQTATLTCTGNSN 166 (280)
T ss_dssp CSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCSEEEECTTCCEEEEEECCCC
T ss_pred ChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCCcEEEecCCCEEEEEEecCC
Confidence 999999999999986 11111222333333 12222111 345678999999999662
Q ss_pred CCceEEEEEEEeecCCCCeEEEeeCCCC------CC---CcceeeeEEEecCCCCCceEEEEEEEEecC
Q psy12131 168 SGIIQYLLKFREREELTPWRNIVIPSDG------SL---AGPIYTQSYNITGLQLFTQYEASVLAKNRF 227 (245)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~---~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~ 227 (245)
.+...+..||+... ......+...... .. ........+.|.++...+...|.|.|.|..
T Consensus 167 ~~~~~~v~W~r~~~-~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 234 (280)
T 3fku_X 167 NVGNQGAAWLQQHQ-GHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEADYYCSTWDSS 234 (280)
T ss_dssp CCCTTCCEEEEECS-SSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEEEETT
T ss_pred CCCCceEEEEEECC-CCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEEEEecCC
Confidence 22112334555432 1111000000000 00 000112569999999999999999999976
No 414
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.44 E-value=1.4e-12 Score=92.03 Aligned_cols=169 Identities=13% Similarity=0.099 Sum_probs=93.6
Q ss_pred ceEEecCCCeEEEEEEEeecC--CCeEEEEEC--CEEec----------------cCCcEEEEe--cCceeEEEEccCCC
Q psy12131 57 QWIHTAPDMRAEIICNVYANP--PAKVEWFRD--GTAIT----------------LGGRIDMHV--SSEKHSLLVRHIKD 114 (245)
Q Consensus 57 ~~~~~~~g~~~~l~C~~~~~~--~~~~~w~~~--~~~~~----------------~~~~~~~~~--~~~~~~l~i~~~~~ 114 (245)
....+.+|+.+.|.|.+.+.+ .+.+.|+++ +.... ...++.+.. .+....|.|.+++.
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 87 (210)
T 3d9a_H 8 GPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTT 87 (210)
T ss_dssp SCSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCCG
T ss_pred CCEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCCc
Confidence 345678999999999999875 378999974 22110 134555543 22356899999999
Q ss_pred CCCeEEEEEEEeCCce-eEEEEEEEe-cCCCCcccc---CccccCCCeeEEEEEeCCC-CCceEEEEEEEeecCCCCeEE
Q psy12131 115 TDFGNYMCQASNNLGS-SQQFIQLSG-IPNIPVFQK---SSRRLGPDGYRLVWQVDTY-SGIIQYLLKFREREELTPWRN 188 (245)
Q Consensus 115 ~d~g~y~C~~~n~~g~-~~~~~~~~~-~~~~p~~~~---~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 188 (245)
+|.|.|.|.+.|.... ....+.+.. .+.+|.+.. ......++.+.|.|.+.+. ++...+ .|+++.. ......
T Consensus 88 ~D~G~Y~C~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v-~W~~~~~-~~~~~~ 165 (210)
T 3d9a_H 88 EDTATYYCANWDGDYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTV-TWNSGSL-SSGVHT 165 (210)
T ss_dssp GGCEEEEEEETTSSCBCCCEEEEECCCCCBCCEEEEECCTTSCCCSSEEEEEEEEEEEBSSCCEE-EEGGGTB-CTTEEE
T ss_pred ccCEEEEEEEecCcccccceEEEeccCCCCCCEEEEecCCcccccCCcEEEEEEEeeEecCCcEE-EEeeCCc-ccceEE
Confidence 9999999999986411 112333332 123343221 1234568899999999654 322122 2433322 111000
Q ss_pred EeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCC
Q psy12131 189 IVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWS 230 (245)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~ 230 (245)
...............+.|......+ ..|.|.|.|..|..
T Consensus 166 --~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~ 204 (210)
T 3d9a_H 166 --FPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASST 204 (210)
T ss_dssp --CCCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTE
T ss_pred --cCCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCc
Confidence 0000000000012345666555333 55556699998864
No 415
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.44 E-value=2.1e-12 Score=81.04 Aligned_cols=93 Identities=17% Similarity=0.201 Sum_probs=69.5
Q ss_pred ecCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCE-Eec-------cCCcEEEE-ecCceeEEEEccCCCCCC
Q psy12131 47 IYPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGT-AIT-------LGGRIDMH-VSSEKHSLLVRHIKDTDF 117 (245)
Q Consensus 47 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~-~~~-------~~~~~~~~-~~~~~~~l~i~~~~~~d~ 117 (245)
..+|.+...+....+.+|+.+.|.|.+.+.+.+.+.|++++. .+. ...++.+. .......|.|.++..+|.
T Consensus 4 ~~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~ 83 (108)
T 3m45_A 4 KGSQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDE 83 (108)
T ss_dssp ----CCCEECCCEEEETTSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGGGC
T ss_pred ccCCCccccCCeeEEEeCCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChhHC
Confidence 345666667778889999999999999999989999998764 222 22355443 233467899999999999
Q ss_pred eEEEEEEEeCCceeEEEEEEEec
Q psy12131 118 GNYMCQASNNLGSSQQFIQLSGI 140 (245)
Q Consensus 118 g~y~C~~~n~~g~~~~~~~~~~~ 140 (245)
|.|.|.+.| .+.....+.|.+.
T Consensus 84 G~Y~C~~~n-~~~~~~~~~L~V~ 105 (108)
T 3m45_A 84 GQYTCSLFT-MPVKTSKAYLTVL 105 (108)
T ss_dssp EEEEEEECS-SSCEEEEEEEEEE
T ss_pred eEEEEEEEc-CCCcEEEEEEEEE
Confidence 999999999 7777777777665
No 416
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.44 E-value=2.7e-13 Score=96.14 Aligned_cols=125 Identities=20% Similarity=0.172 Sum_probs=87.0
Q ss_pred ceEEEe--ecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEee----c
Q psy12131 3 EIELLY--NRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYA----N 76 (245)
Q Consensus 3 ~~~~~~--~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~----~ 76 (245)
++.+.. ..+.|.|.+++.+|+|.|+|.|.|..|. ....+.|.|..+|........ ...+..+.|.|.... .
T Consensus 66 ~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~v~~~P~~p~~~~~--~~~~~~~~l~w~~p~~~~~~ 142 (215)
T 3mtr_A 66 NIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQ-ESLEFILVQADTPSSPSIDQV--EPYSSTAQVQFDEPEATGGV 142 (215)
T ss_dssp SEEEEEETTEEEEEECCCSGGGCEEEEEEEECSSCE-EEEEEEEEECCCCCCCEEEEE--EEETTEEEEEEECCSCCCSS
T ss_pred cEEEecCCCeeEEEEecCChhhCeEEEEEEEECCCc-eEEEEEEEECCCCCCCcceEE--EEecceEEEEEecCCccCCC
Confidence 445553 3467999999999999999999999988 678888999877765433222 234677888887422 2
Q ss_pred CCC--eEEEEECCEEeccCCcEEEEe----cCceeEEEEccCCCCCCeEEEEEEEeCCceeEEE
Q psy12131 77 PPA--KVEWFRDGTAITLGGRIDMHV----SSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQF 134 (245)
Q Consensus 77 ~~~--~~~w~~~~~~~~~~~~~~~~~----~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~ 134 (245)
|.. .+.|.+++.. .+..... ......+.|.++.+.+.|.|+|.|.|..|....+
T Consensus 143 pi~~y~v~~~~~~~~----~w~~~~~~~~~~~~~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S 202 (215)
T 3mtr_A 143 PILKYKAEWRAVGEE----VWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEIS 202 (215)
T ss_dssp CEEEEEEEEEETTCC----CCEEEEEEHHHHHHHTEEEEECCCTTCEEEEEEEEEESSCBCCCC
T ss_pred ceEEEEEEEEECCCC----cccccccccccccccccEEECCCCCCCEEEEEEEEEeCCcccCcc
Confidence 222 4778876643 1111111 1112579999999999999999999999876543
No 417
>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.43 E-value=7.4e-13 Score=83.37 Aligned_cols=85 Identities=25% Similarity=0.300 Sum_probs=67.8
Q ss_pred ccCCCeeEEEEEeCC--C-CCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCC
Q psy12131 152 RLGPDGYRLVWQVDT--Y-SGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFG 228 (245)
Q Consensus 152 ~~~~~~~~l~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G 228 (245)
.....++.|.|.+.. + .++.+|.|+|+.......|..+..... ..+.+.+|.+++.|.|||.|.|..|
T Consensus 18 ~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~---------~~~~v~~L~p~t~Y~frV~A~n~~G 88 (109)
T 1x5x_A 18 KAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYDGED---------LAYTVKNLRRSTKYKFKVIAYNSEG 88 (109)
T ss_dssp EECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEEEEEESC---------SEEEEESCCSSCEEEEEEEEECSSC
T ss_pred EccCCEEEEEEcCCCCCCCCcccEEEEEEecCCCCcceEEeEeCCc---------cEEEECCCCCCCEEEEEEEEEeCCC
Confidence 456789999999832 2 378999999988653345665443222 6799999999999999999999999
Q ss_pred CCCCCcceEEecCCCCC
Q psy12131 229 WSRPSKAYVFATEGAET 245 (245)
Q Consensus 229 ~~~~s~~~~~~t~~~~~ 245 (245)
.|.+|..+.++|.+.+|
T Consensus 89 ~s~~S~~~~~~T~~~~P 105 (109)
T 1x5x_A 89 KSNPSEVVEFTTCPDSG 105 (109)
T ss_dssp EEEECCCEEEECCCCCC
T ss_pred CcCCccCEEeEeCCCCC
Confidence 99999999999987654
No 418
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=99.43 E-value=3e-11 Score=84.89 Aligned_cols=129 Identities=18% Similarity=0.191 Sum_probs=93.2
Q ss_pred EEEEccCCCCCCeEEEEEEEeCCceeEEE---EEEEecCC----CCccccCccccCCCeeEEEEEeC----CCCCceEEE
Q psy12131 106 SLLVRHIKDTDFGNYMCQASNNLGSSQQF---IQLSGIPN----IPVFQKSSRRLGPDGYRLVWQVD----TYSGIIQYL 174 (245)
Q Consensus 106 ~l~i~~~~~~d~g~y~C~~~n~~g~~~~~---~~~~~~~~----~p~~~~~~~~~~~~~~~l~~~~~----~~~~~~~~~ 174 (245)
.+.+ ++.+.....|+..|.|..|..... +.+...+. +|.... .......++.|.|.+. .++++.+|.
T Consensus 64 ~~~~-~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~~T~~~~P~~~P~~~~-~~~~~~~sv~l~W~~p~~~~~ng~i~~Y~ 141 (205)
T 1cfb_A 64 SFVV-QMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVV-GQGTEPNNLVISWTPMPEIEHNAPNFHYY 141 (205)
T ss_dssp EEEE-ECCSSEEEEEEEEEEETTEECCCCCCCCCEEECCCCCSCCCSCCE-EECSSTTCEEEECCCCCGGGTCSSSCEEE
T ss_pred EEEE-eCCCCCEEEEEEEEEECCccCCCCCCceeEEcCCcCCCCCCeeeE-eecCCCCeEEEEEECCCccccCCCceEEE
Confidence 4555 788877778888899988754332 23332222 232222 2235567899999983 467899999
Q ss_pred EEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCC-CCcceEEecCCC
Q psy12131 175 LKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSR-PSKAYVFATEGA 243 (245)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~-~s~~~~~~t~~~ 243 (245)
+.|+.......|.......... ..+.+.+|.+++.|.|+|.|.|..|.|. .|..+.++|.+.
T Consensus 142 v~~~~~~~~~~~~~~~~~~~~~-------~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ss~~v~~~T~e~ 204 (205)
T 1cfb_A 142 VSWKRDIPAAAWENNNIFDWRQ-------NNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSGED 204 (205)
T ss_dssp EEEEESSTTCCCEEEEECCTTC-------CEEEECSCCSSCEEEEEEEEEETTEECSSCCCCEEEESSSC
T ss_pred EEEEECCCCCCcEEEEecCCCc-------cEEEEcCCCCCcEEEEEEEEEcCCCcCCCCCCcEEEecCCC
Confidence 9999876445587776644322 7899999999999999999999999999 578999988764
No 419
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=99.43 E-value=2.2e-11 Score=86.10 Aligned_cols=132 Identities=14% Similarity=0.111 Sum_probs=97.8
Q ss_pred eeEEEEccCCCCCCeEEEEEEEeCCceeEEE---EEEEec---C----CCCccccCccccCCCeeEEEEEeC---CCCCc
Q psy12131 104 KHSLLVRHIKDTDFGNYMCQASNNLGSSQQF---IQLSGI---P----NIPVFQKSSRRLGPDGYRLVWQVD---TYSGI 170 (245)
Q Consensus 104 ~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~---~~~~~~---~----~~p~~~~~~~~~~~~~~~l~~~~~---~~~~~ 170 (245)
...+.+.++.+...+.|++.|.|..|..... ..+... + .+|.... .......++.|.|.+. .+.++
T Consensus 69 ~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~s~~s~~~~~~~~~~~~~~~~P~~~~-~~~~~~~sv~l~W~~p~~~~~~~i 147 (214)
T 2ibg_A 69 SFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPELLE-IEEYSETAVVLHWSLASDADEHLI 147 (214)
T ss_dssp EEEEEECSCCTTCEEEEEEEEEETTSCEEECCCCCCEECCCSTTSCCCCCCEECC-CBCCSSSCEEEEEECCTTCCGGGC
T ss_pred ceeEEecCCcCCCEEEEEEEEEecCCCCCCCCCcccEEeccCcCCCCCCCCcccE-EEEccCCeEEEEEeCCCccCCCCc
Confidence 3467899999988899999999987654332 112211 1 1233222 2335667899999985 45788
Q ss_pred eEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceEEecCCC
Q psy12131 171 IQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYVFATEGA 243 (245)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~~t~~~ 243 (245)
.+|.|+|+.......|..+....... ..+.+.+|.+++.|.|+|.|.|..|.|.+|..+.++|...
T Consensus 148 ~~Y~v~~~~~~~~~~~~~~~~~~~~~-------~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~p 213 (214)
T 2ibg_A 148 TGYYAYYRPSSSAGEYFKATIEGAHA-------RSFKIAPLETATMYEFKLQSFSAASASEFSALKQGRTQRP 213 (214)
T ss_dssp CEEEEEEEETTCCSCCEEEEEECTTC-------CEEEECSCCTTCEEEEEEEEECSSCBCCCCCCEEEECCCC
T ss_pred ceEEEEEEECCCCcceEEeeccCCcc-------eEEEeCCCCCCCEEEEEEEEEcCCccCCCcceEeeEecCC
Confidence 99999999876336787776544322 6799999999999999999999999999999999999753
No 420
>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.43 E-value=5.3e-12 Score=80.11 Aligned_cols=84 Identities=24% Similarity=0.311 Sum_probs=68.3
Q ss_pred CCCeeEEEEEeC--CCCCceEEEEEEEeec--CCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCC
Q psy12131 154 GPDGYRLVWQVD--TYSGIIQYLLKFRERE--ELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGW 229 (245)
Q Consensus 154 ~~~~~~l~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~ 229 (245)
...++.|.|.+. .++++.+|.|+|+... ....|......... ..+.|.+|.+++.|.|+|.|.|..|.
T Consensus 23 ~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~--------~~~~i~~L~p~t~Y~~~V~A~n~~G~ 94 (114)
T 2ede_A 23 KPRAVIVSWQPPLEANGKITAYILFYTLDKNIPIDDWIMETISGDR--------LTHQIMDLNLDTMYYFRIQARNSKGV 94 (114)
T ss_dssp CSSCEEEEEECCSSCSSCCSEEEEEEESCSSSCTTTSEEEEEETTC--------CEEEECSCCSSCEEEEEEEEECSSCB
T ss_pred CCCEEEEEECCCCCCCCceeEEEEEEEeCCCCCccceEEEEECCCc--------eEEEEcCCCCCCEEEEEEEEEeCCcC
Confidence 567999999983 3467899999998854 23456655444333 78999999999999999999999999
Q ss_pred CCCCcceEEecCCCCC
Q psy12131 230 SRPSKAYVFATEGAET 245 (245)
Q Consensus 230 ~~~s~~~~~~t~~~~~ 245 (245)
|.+|..+.++|.+.++
T Consensus 95 g~~S~~~~~~T~~~~p 110 (114)
T 2ede_A 95 GPLSDPILFRTLKVSG 110 (114)
T ss_dssp CCCCCCEEEECCCSSC
T ss_pred cCCcccEEEEecCCCC
Confidence 9999999999988754
No 421
>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.43 E-value=7.9e-13 Score=84.50 Aligned_cols=96 Identities=22% Similarity=0.320 Sum_probs=73.9
Q ss_pred cCCCCccccCccccCCCeeEEEEEe--CCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceE
Q psy12131 140 IPNIPVFQKSSRRLGPDGYRLVWQV--DTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQY 217 (245)
Q Consensus 140 ~~~~p~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y 217 (245)
.|.+|..... ......++.|.|.+ +++.++..|.|+|+.......|..+..... ..+.+.+|.+++.|
T Consensus 17 ~P~~P~~~~~-~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~---------~~~~v~~L~p~t~Y 86 (118)
T 1x3d_A 17 EPDIPNPPRI-ANRTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQCYMGSQ---------KQFKITKLSPAMGC 86 (118)
T ss_dssp CCCCCCCCEE-EEEETTEEEEECCCCCCCSSCEEEEEEEECTTTSSSCCEEEEEESC---------SEEEEESCCTTCEE
T ss_pred CCcCCCCcEE-eccCCCEEEEEECCCCCCCCcceEEEEEEecCCCCCCeEEeeccCC---------cEEEeCCCCCCCEE
Confidence 3445443332 23567799999998 345688999999988653367876543222 67899999999999
Q ss_pred EEEEEEEecCCCCCCCcceEEecCCCCC
Q psy12131 218 EASVLAKNRFGWSRPSKAYVFATEGAET 245 (245)
Q Consensus 218 ~~~v~a~N~~G~~~~s~~~~~~t~~~~~ 245 (245)
.|||.|.|..|.|.+|..+.++|.+.+|
T Consensus 87 ~frV~A~n~~G~s~~S~~~~~~T~~~~P 114 (118)
T 1x3d_A 87 KFRLSARNDYGTSGFSEEVLYYTSGCSG 114 (118)
T ss_dssp EEECCEEESSCBCCCCCCEEEECSCCCC
T ss_pred EEEEEEEECCCCCCCccCEEEEcCCCCC
Confidence 9999999999999999999999988754
No 422
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.42 E-value=1.3e-11 Score=91.58 Aligned_cols=170 Identities=12% Similarity=0.072 Sum_probs=101.2
Q ss_pred cceEEecCCCeEEEEEEEeecC--CCeEEEEECC--EE---ec--------------cCCcEEEEe--cCceeEEEEccC
Q psy12131 56 KQWIHTAPDMRAEIICNVYANP--PAKVEWFRDG--TA---IT--------------LGGRIDMHV--SSEKHSLLVRHI 112 (245)
Q Consensus 56 ~~~~~~~~g~~~~l~C~~~~~~--~~~~~w~~~~--~~---~~--------------~~~~~~~~~--~~~~~~l~i~~~ 112 (245)
+..+.+.+|+.+.|.|.+.+.+ .+.+.|++.. .. +. ...++.+.. ......|.|.++
T Consensus 29 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 108 (291)
T 2gki_A 29 SGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSL 108 (291)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECSC
T ss_pred CCcEEecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECcC
Confidence 3456788999999999998776 5789999842 11 10 113444332 234568999999
Q ss_pred CCCCCeEEEEEEEeCC-c--e--eEEEEEEEecC---------------CCCcccc---CccccCCCeeEEEEEeCCCCC
Q psy12131 113 KDTDFGNYMCQASNNL-G--S--SQQFIQLSGIP---------------NIPVFQK---SSRRLGPDGYRLVWQVDTYSG 169 (245)
Q Consensus 113 ~~~d~g~y~C~~~n~~-g--~--~~~~~~~~~~~---------------~~p~~~~---~~~~~~~~~~~l~~~~~~~~~ 169 (245)
+.+|.|.|.|.+.|.. | . ......|.+.. .++.+.. ......++.+.|.|...+.++
T Consensus 109 ~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~ 188 (291)
T 2gki_A 109 TSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKVTMSCKSSQSLF 188 (291)
T ss_dssp CGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCSEEEEETTSCEEEEEEESSCCE
T ss_pred CHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcEEEEEEcCCccc
Confidence 9999999999999874 2 1 11122344433 1222221 123568999999999966543
Q ss_pred ce----EEEEEEEeec-CCCCeEEEeeCC----C-CCCC---cceeeeEEEecCCCCCceEEEEEEEEec
Q psy12131 170 II----QYLLKFRERE-ELTPWRNIVIPS----D-GSLA---GPIYTQSYNITGLQLFTQYEASVLAKNR 226 (245)
Q Consensus 170 ~~----~~~~~~~~~~-~~~~~~~~~~~~----~-~~~~---~~~~~~~~~i~~l~~~~~y~~~v~a~N~ 226 (245)
.. ....||++.. ....+.. .... . .... .......+.|.++...+...|.|.|.|.
T Consensus 189 ~~~~~~~~v~W~k~~~g~~~~~l~-~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~ 257 (291)
T 2gki_A 189 NSRTRKNYLAWYQQKPGQSPKLLI-YWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYY 257 (291)
T ss_dssp ETTTTEECEEEEEECTTSCCEEEE-ETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred cccccceeEEEEEECCCCCcEEEE-EEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHCEEEEEEEccC
Confidence 21 1345666532 1111111 0000 0 0000 0111257899999999999999999995
No 423
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.42 E-value=4.6e-13 Score=96.01 Aligned_cols=118 Identities=14% Similarity=0.139 Sum_probs=78.4
Q ss_pred ceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEE----ecCCeEEeecceEEecCCCeEEEEEEEeec-C-CCeEEEE
Q psy12131 11 ESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNV----IYPPEVSVEKQWIHTAPDMRAEIICNVYAN-P-PAKVEWF 84 (245)
Q Consensus 11 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v----~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~-~~~~~w~ 84 (245)
+.|.|.+++.+|+|.|+|.+.+..+. ......+.+ ..+|.+...+.......+..+.|.|.+.|. | .+.+.|+
T Consensus 77 s~L~I~~~~~~D~g~Y~C~~~~~~~~-~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~ 155 (231)
T 2w59_A 77 SAVPVSTQDWLSGERFTCTVQHEELP-LPLSKSVYRNTGPTTPPLIYPFAPHPEELSLSRVTLSCLVRGFRPRDIEIRWL 155 (231)
T ss_dssp EEEECCHHHHHTTCCEEEEEECTTCS-SCEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEE
T ss_pred EEEEecchhccCCCEEEEEEEcCCCC-CceEEEEecCCCCCcCCEEEEeCCCHHHhccCceEEEEEEEeccCCCcEEEEE
Confidence 35999999999999999999987654 222332322 145665543322111235679999999985 4 3689999
Q ss_pred ECCEEeccCCcEE---EE---------ec-Cc---eeEEEEccCCCCCCeEEEEEEEeCCc
Q psy12131 85 RDGTAITLGGRID---MH---------VS-SE---KHSLLVRHIKDTDFGNYMCQASNNLG 129 (245)
Q Consensus 85 ~~~~~~~~~~~~~---~~---------~~-~~---~~~l~i~~~~~~d~g~y~C~~~n~~g 129 (245)
+++..+....... .. .+ +. .+.|.|......|.|.|+|.+.|...
T Consensus 156 k~g~~l~~~~~~~~~~~~~~~~~~~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~n~~l 216 (231)
T 2w59_A 156 RDHRAVPATEFVTTAVLPEERTANGAGGDGDTFFVYSKMSVETAKWNGGTVFACMAVHEAL 216 (231)
T ss_dssp ETTEECCGGGCEECCCEECCTTSCC---CCCCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred ECCEECCCcccccCccccCcccccccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEEcCCC
Confidence 9998876543111 11 11 11 24677777777789999999999764
No 424
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.42 E-value=1.6e-12 Score=92.87 Aligned_cols=171 Identities=10% Similarity=0.055 Sum_probs=92.6
Q ss_pred cceEEecCCCeEEEEEEEeecC--CCeEEEEECC--EE---e---c-----------cCCcEEEEec--CceeEEEEccC
Q psy12131 56 KQWIHTAPDMRAEIICNVYANP--PAKVEWFRDG--TA---I---T-----------LGGRIDMHVS--SEKHSLLVRHI 112 (245)
Q Consensus 56 ~~~~~~~~g~~~~l~C~~~~~~--~~~~~w~~~~--~~---~---~-----------~~~~~~~~~~--~~~~~l~i~~~ 112 (245)
+....+.+|+.+.|.|.+.+.+ .+.+.|++.. .. + . ...++.+..+ .....|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (227)
T 1mju_H 7 PGAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSSL 86 (227)
T ss_dssp CSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECCC
Confidence 3456688999999999999876 5789999842 11 1 0 1245555432 34678999999
Q ss_pred CCCCCeEEEEEEEeCCce-eEEEEEEEecC---CCCcccc---CccccCCCeeEEEEEeCCCCCc-eEEEEEEEeecCCC
Q psy12131 113 KDTDFGNYMCQASNNLGS-SQQFIQLSGIP---NIPVFQK---SSRRLGPDGYRLVWQVDTYSGI-IQYLLKFREREELT 184 (245)
Q Consensus 113 ~~~d~g~y~C~~~n~~g~-~~~~~~~~~~~---~~p~~~~---~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~ 184 (245)
+.+|.|.|.|.+.+..+. ......|.+.. .+|.... ......++.+.|.|.+.+..|. ..+ .|+++.. ..
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v-~W~~~g~-~~ 164 (227)
T 1mju_H 87 TSDDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTL-TWNSGSL-SS 164 (227)
T ss_dssp CGGGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECCCC------CEEEEEEEEEEBSSCCEE-EEGGGTB-CT
T ss_pred CcccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecCCccccCCCcEEEEEEeecEeCCCeEE-EEecCCC-cC
Confidence 999999999999986421 11223344432 2333221 1123567899999999654222 122 2444322 11
Q ss_pred CeEEEeeCCCCCCCcce-eeeEEEecCCCCCceEEEEEEEEecCCCCCC
Q psy12131 185 PWRNIVIPSDGSLAGPI-YTQSYNITGLQLFTQYEASVLAKNRFGWSRP 232 (245)
Q Consensus 185 ~~~~~~~~~~~~~~~~~-~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~ 232 (245)
... ....... .... ....+.|......+ ..|.|.|.|..+....
T Consensus 165 ~~~--~~~~~~~-~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~ 209 (227)
T 1mju_H 165 GVH--TFPAVLQ-SDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKV 209 (227)
T ss_dssp TEE--ECCCEEE-TTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEEE
T ss_pred CcE--ECCceec-CCeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcce
Confidence 100 0000000 0111 12456777665444 5556669997665433
No 425
>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.42 E-value=1.1e-12 Score=84.64 Aligned_cols=98 Identities=23% Similarity=0.289 Sum_probs=73.6
Q ss_pred cCCCCccccCccccCCCeeEEEEEe--CCCCCceEEEEEEEeec--CCCCeEEEeeC--CCCCCCcceeeeEEEecCCCC
Q psy12131 140 IPNIPVFQKSSRRLGPDGYRLVWQV--DTYSGIIQYLLKFRERE--ELTPWRNIVIP--SDGSLAGPIYTQSYNITGLQL 213 (245)
Q Consensus 140 ~~~~p~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~l~~ 213 (245)
.|.+|...... .....++.|.|.+ +++.++.+|.|+|+... ....|..+... ... ...+.+.+|.+
T Consensus 17 ~P~~P~~l~~~-~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~~~~~~~~~-------~~~~~v~~L~p 88 (124)
T 1wis_A 17 LPGPPTNLGIS-NIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPD-------ARSMEVPDLNP 88 (124)
T ss_dssp CCCCCEEEEEE-SCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEEESCTT-------CSEEEECSCCT
T ss_pred CCccCCCCEEE-EecCCEEEEEEECCCCCCCcccEEEEEEEECCCCCCCCCeEeeeEccCCC-------ceEEEeCCCCC
Confidence 34555544332 3567899999988 45578999999998841 36778765432 111 16899999999
Q ss_pred CceEEEEEEEEecCCCCCCCcc-eEEecCCCCC
Q psy12131 214 FTQYEASVLAKNRFGWSRPSKA-YVFATEGAET 245 (245)
Q Consensus 214 ~~~y~~~v~a~N~~G~~~~s~~-~~~~t~~~~~ 245 (245)
++.|.|||.|.|..|.|.+|.. ..++|.+.+|
T Consensus 89 ~t~Y~frV~A~N~~G~s~~S~~~~~~~T~~~~P 121 (124)
T 1wis_A 89 FTCYSFRMRQVNIVGTSPPSQPSRKIQTLQSGP 121 (124)
T ss_dssp TSEECCCCEEECSSCBCCCCCCCCCEECCCSSC
T ss_pred CCEEEEEEEEEECCccCCCcCCccceEcCCCCC
Confidence 9999999999999999999986 5688887765
No 426
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.42 E-value=5.9e-12 Score=79.44 Aligned_cols=92 Identities=22% Similarity=0.398 Sum_probs=68.8
Q ss_pred ecCCeEEeecceEEecCCCeEEEEEEEeecC--CCeEEEEECCEEeccCCcEEE-EecC-------ceeEEEEccCCCCC
Q psy12131 47 IYPPEVSVEKQWIHTAPDMRAEIICNVYANP--PAKVEWFRDGTAITLGGRIDM-HVSS-------EKHSLLVRHIKDTD 116 (245)
Q Consensus 47 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~--~~~~~w~~~~~~~~~~~~~~~-~~~~-------~~~~l~i~~~~~~d 116 (245)
..+|.+...+....+..|+.+.|.|.+.+.+ .+.+.|++++..+........ .... ....|.|.++...|
T Consensus 8 ~~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 87 (112)
T 3so5_A 8 FPXPQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTS 87 (112)
T ss_dssp CCSCEEEECCCCEEECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGGG
T ss_pred CCCCeEEeCCCCcEEECCCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeeeeccCCCccccceEEEEecccccc
Confidence 3577887777778899999999999998654 579999999988765432111 1111 13689999999999
Q ss_pred CeEEEEEEEeCCcee-EEEEEEE
Q psy12131 117 FGNYMCQASNNLGSS-QQFIQLS 138 (245)
Q Consensus 117 ~g~y~C~~~n~~g~~-~~~~~~~ 138 (245)
.|.|.|.+.|..|.. ...+.|.
T Consensus 88 ~G~Y~C~a~n~~g~~~s~~~~l~ 110 (112)
T 3so5_A 88 EGXYQCVISNHFGSSYSVXAXLT 110 (112)
T ss_dssp CEEEEEEEEETTEEEECCCEEEE
T ss_pred CCeEEEEEEeCCCcEEEeEEEEE
Confidence 999999999999873 3444443
No 427
>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.42 E-value=2.4e-12 Score=82.65 Aligned_cols=98 Identities=19% Similarity=0.260 Sum_probs=72.2
Q ss_pred cCCCCccccCccccCCCeeEEEEEe--CCCCCceEEEEEEEeecCCCCeEEEeeC-CCCCCCcceeeeEEEecCCCCCce
Q psy12131 140 IPNIPVFQKSSRRLGPDGYRLVWQV--DTYSGIIQYLLKFREREELTPWRNIVIP-SDGSLAGPIYTQSYNITGLQLFTQ 216 (245)
Q Consensus 140 ~~~~p~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~l~~~~~ 216 (245)
.|.+|..... ......++.|.|.+ +++.++.+|.|+|+.......|..+... ... ...+.+.+|.+++.
T Consensus 17 ~P~~P~~~~~-~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~-------~~~~~v~~L~p~t~ 88 (121)
T 1x4z_A 17 PPEAPDRPTI-STASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSAIPPS-------RLSVEITGLEKGIS 88 (121)
T ss_dssp CCCCCCCCEE-EECCSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEEEECTT-------CCEEEEESCCTTCE
T ss_pred CCccCCCCEE-EEccCCEEEEEEECCCCCCCcceEEEEEEEECCCCCceEEeecccCCC-------cCEEEECCCCCCCE
Confidence 3445544332 23567899999997 4456899999999886434678766432 111 17899999999999
Q ss_pred EEEEEEEEecCCCCCCCcceE-EecCCCCC
Q psy12131 217 YEASVLAKNRFGWSRPSKAYV-FATEGAET 245 (245)
Q Consensus 217 y~~~v~a~N~~G~~~~s~~~~-~~t~~~~~ 245 (245)
|.|||.|.|..|.|.+|.... +++.+.+|
T Consensus 89 Y~frV~A~n~~G~s~~S~~~~~v~~~~~~P 118 (121)
T 1x4z_A 89 YKFRVRALNMLGESEPSAPSRPYVVSGSGP 118 (121)
T ss_dssp EEEEEEEEETTEECCCCCCCCCEECCSSCC
T ss_pred EEEEEEEEcCCCcCCCcCCCCCEEcCCCCC
Confidence 999999999999999998764 66666554
No 428
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.42 E-value=4.6e-13 Score=97.87 Aligned_cols=129 Identities=16% Similarity=0.201 Sum_probs=79.8
Q ss_pred cceEEEeec----ceEEEeccCCCCCEEEEEEEEcCCC------C-ceeeEEEEEEe----cCCeEEeecceEEecCCCe
Q psy12131 2 KEIELLYNR----ESLDLDRVTLKLAGLYQCIASNNIG------E-STSKNFIVNVI----YPPEVSVEKQWIHTAPDMR 66 (245)
Q Consensus 2 ~~~~~~~~~----~~L~i~~~~~~d~G~Y~C~~~~~~~------~-~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~ 66 (245)
+|+.+..+. .+|+|.+++.+|+|.|.|.+.+..+ . .......|.|. .+|.+........+..|..
T Consensus 65 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~ 144 (263)
T 3iu4_H 65 SRLSISKDNSKSQVFLKMNSLQTDDTAMYYCARSGVREGRAQAWFAYWGQGTLVTVSAASTKGPSVFPLAPSSKGSTSGT 144 (263)
T ss_dssp TCEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEECC---CEEEEEEECCCEEEEECSSCCBCCEEEEECCCCCC----E
T ss_pred CCEEEEecCCCCEEEEEECCCCHHHCEEEEEEEEeCCCCccccccceeCCceEEEEecccCCCCEEEEccCccccccCCc
Confidence 567766433 3499999999999999999987531 0 01123456664 3555553333333457899
Q ss_pred EEEEEEEeecCC--CeEEEEECCEEecc-----------CCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEE
Q psy12131 67 AEIICNVYANPP--AKVEWFRDGTAITL-----------GGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQ 133 (245)
Q Consensus 67 ~~l~C~~~~~~~--~~~~w~~~~~~~~~-----------~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~ 133 (245)
+.|.|.+.+.++ +.+.| ++..+.. +..+.+ .+.|.|......| |.|+|.+.+..+....
T Consensus 145 ~~L~C~~~~~~P~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~-----~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~ 216 (263)
T 3iu4_H 145 AALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSL-----SSVVTVPSSSLGT-QTYICNVNHKPSNTKV 216 (263)
T ss_dssp EEEEEEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEE-----EEEEEEETTHHHH-CCCEEEEEEGGGTEEE
T ss_pred EEEEEEEEeEeCCceEEEE--CCcccCCceeecCceECCCCCEEE-----EEEEEECHhHcCC-CEEEEEEEECCCCcce
Confidence 999999987533 57999 4332221 111111 2467888777778 9999999998876555
Q ss_pred EEEEE
Q psy12131 134 FIQLS 138 (245)
Q Consensus 134 ~~~~~ 138 (245)
...+.
T Consensus 217 ~~~~~ 221 (263)
T 3iu4_H 217 DKKVE 221 (263)
T ss_dssp EEECC
T ss_pred eEEEc
Confidence 54444
No 429
>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.41 E-value=1e-11 Score=78.97 Aligned_cols=86 Identities=20% Similarity=0.217 Sum_probs=70.7
Q ss_pred ccCCCeeEEEEEeC-CCCCceEEEEEEEeecC---CCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecC
Q psy12131 152 RLGPDGYRLVWQVD-TYSGIIQYLLKFREREE---LTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRF 227 (245)
Q Consensus 152 ~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~ 227 (245)
.....++.|+|.+. .++.+.+|.|.|+.... ...|....+..... ..+.|.+|.+++.|.|+|.|.|..
T Consensus 26 a~sstsi~vsW~~~~~~g~i~gY~V~Y~~~~~~~~~~~~~~~~v~~~~~-------~~~~l~~L~p~T~Y~~~V~A~n~~ 98 (120)
T 1ujt_A 26 VLTPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTE-------RSAVLVNLKKGVTYEIKVRPYFNE 98 (120)
T ss_dssp CCBTTEEEEEEEESSCCSSCCEEEEEEEESSSSSTTTCCEEEECCCTTC-------CEEEEESCCSSEEEEEEEEEESSS
T ss_pred EccCceEEEEEccCCCCCcEeeEEEEEEECCCCCCCCccEEEEecCCCc-------CEEEECCCCCCCEEEEEEEEECCC
Confidence 45678999999984 45789999999998752 24676554433322 789999999999999999999999
Q ss_pred CCCCCCcceEEecCCCC
Q psy12131 228 GWSRPSKAYVFATEGAE 244 (245)
Q Consensus 228 G~~~~s~~~~~~t~~~~ 244 (245)
|.|.+|..+.++|...+
T Consensus 99 G~Gp~S~~v~~~T~e~v 115 (120)
T 1ujt_A 99 FQGMDSESKTVRTTEES 115 (120)
T ss_dssp CCCCCCCCEEEEECSSC
T ss_pred ccCCCCCCEEEECCCCC
Confidence 99999999999999876
No 430
>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.41 E-value=2.8e-12 Score=80.27 Aligned_cols=83 Identities=20% Similarity=0.204 Sum_probs=65.8
Q ss_pred ccCCCeeEEEEEeCC-C-CCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCC
Q psy12131 152 RLGPDGYRLVWQVDT-Y-SGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGW 229 (245)
Q Consensus 152 ~~~~~~~~l~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~ 229 (245)
.....++.|.|.+.. + .++.+|.|+|+... ..|..+.... ...+.+.+|.+++.|.|||.|.|..|.
T Consensus 18 ~~s~~sv~l~W~~p~~~g~~i~~Y~v~~~~~~--~~~~~~~~~~---------~~~~~v~~L~p~t~Y~frV~A~n~~G~ 86 (106)
T 1x4x_A 18 CRSATCAQVNWEVPLSNGTDVTEYRLEWGGVE--GSMQICYCGP---------GLSYEIKGLSPATTYYCRVQALSVVGA 86 (106)
T ss_dssp EEETTEEEEECCCCSCSSSCCCEEEEEEESST--TSCCEEEEES---------CSEEEEESCCSSCEEEEEEEEECSSCC
T ss_pred EcCCCEEEEEEcCCCCCCCcceEEEEEEEcCC--CceEEEEeCC---------cceEEEcCCCCCCEEEEEEEEEcCCcC
Confidence 356789999999833 3 48999999998753 3343332211 167899999999999999999999999
Q ss_pred CCCCcceEEecCCCCC
Q psy12131 230 SRPSKAYVFATEGAET 245 (245)
Q Consensus 230 ~~~s~~~~~~t~~~~~ 245 (245)
|.+|..+.++|.+.+|
T Consensus 87 g~~S~~v~~~T~~~~P 102 (106)
T 1x4x_A 87 GPFSEVVACVTPPSSG 102 (106)
T ss_dssp CCBCCCEEEECCCCCS
T ss_pred CCCcCCEEEECCCCCc
Confidence 9999999999998765
No 431
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.41 E-value=2.6e-12 Score=78.74 Aligned_cols=82 Identities=20% Similarity=0.314 Sum_probs=68.1
Q ss_pred cceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEE
Q psy12131 56 KQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFI 135 (245)
Q Consensus 56 ~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 135 (245)
+....+.+|+.+.|.|.+.+ .|.+.|++++..+....++.+. ...|.|.++..+|.|.|.|.+.|..|.....+
T Consensus 8 p~~~~v~~G~~~~l~C~~~~--~p~v~W~k~g~~~~~~~~~~~~----~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~ 81 (95)
T 4hwu_A 8 PEAYVVAPGESLELQCMLKD--AAVISWTKDGVHLGPNNRTVLI----GEYLQIKGATPRDSGLYACTAARTVDSETWIF 81 (95)
T ss_dssp CEEEEECTTSCEEEECCCCT--TCEEEEEETTEEECCCSSEEEE----TTEEEECSCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred CCcEEECCCCEEEEEEEeCC--CCEEEEEECCEECCCCceEEEe----CCEEEECcCCcccCEEEEEEEccCCCcEEEEE
Confidence 44567889999999999986 5799999999988777666553 24799999999999999999999999888888
Q ss_pred EEEecCCC
Q psy12131 136 QLSGIPNI 143 (245)
Q Consensus 136 ~~~~~~~~ 143 (245)
.+.+...+
T Consensus 82 ~l~V~~~~ 89 (95)
T 4hwu_A 82 MVNVTDAA 89 (95)
T ss_dssp EEEECCC-
T ss_pred EEEEeCCc
Confidence 88776443
No 432
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.41 E-value=3.3e-12 Score=93.04 Aligned_cols=134 Identities=16% Similarity=0.215 Sum_probs=81.4
Q ss_pred cceEEEeec----ceEEEeccCCCCCEEEEEEEEcCCC---------C-ceeeEEEEEEe----cCCeEEeecceEEecC
Q psy12131 2 KEIELLYNR----ESLDLDRVTLKLAGLYQCIASNNIG---------E-STSKNFIVNVI----YPPEVSVEKQWIHTAP 63 (245)
Q Consensus 2 ~~~~~~~~~----~~L~i~~~~~~d~G~Y~C~~~~~~~---------~-~~~~~~~l~v~----~~p~~~~~~~~~~~~~ 63 (245)
+|+.+..+. .+|+|.+++.+|+|.|.|.+.+..+ . .......|.|. .+|.+........+..
T Consensus 89 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~ 168 (256)
T 3sob_H 89 GRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTS 168 (256)
T ss_dssp TTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECSSCCBCCEEEEECCC-----
T ss_pred CcEEEEEeCCCCEEEEEECCCCcccCEEEEEEEecCCCccccccccceeEECCCEEEEEecCCCCCCEEEEECCCccccc
Confidence 567776443 3499999999999999999987431 0 11223456665 3455553333334568
Q ss_pred CCeEEEEEEEeec-C-CCeEEEEECCEEeccCCcE--EEEecC----ceeEEEEccCCCCCCeEEEEEEEeCCceeEEEE
Q psy12131 64 DMRAEIICNVYAN-P-PAKVEWFRDGTAITLGGRI--DMHVSS----EKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFI 135 (245)
Q Consensus 64 g~~~~l~C~~~~~-~-~~~~~w~~~~~~~~~~~~~--~~~~~~----~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 135 (245)
|+.+.|.|.+.+. | .+.+.| ++..+...... ...... ..+.|.|......| |.|+|.+.+..+......
T Consensus 169 g~~v~L~C~~~~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-~~ytC~v~~~~~~~~~~~ 245 (256)
T 3sob_H 169 GGTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDK 245 (256)
T ss_dssp TTEEEEEEEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEE
T ss_pred CCcEEEEEEEEEEECCCeEEEE--CCcccCCCeEeCCceeCCCCCEEEEEEEEECHHHcCC-ceEEEEEEeCCCCcceEE
Confidence 9999999999874 4 347999 44333211000 001111 12468888888888 999999999876655544
Q ss_pred EEE
Q psy12131 136 QLS 138 (245)
Q Consensus 136 ~~~ 138 (245)
.+.
T Consensus 246 ~~~ 248 (256)
T 3sob_H 246 KVE 248 (256)
T ss_dssp ECC
T ss_pred Eec
Confidence 443
No 433
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.41 E-value=1.5e-12 Score=92.67 Aligned_cols=167 Identities=11% Similarity=0.077 Sum_probs=95.4
Q ss_pred eEEecCCCeEEEEEEEeecC--CCeEEEEECC--EE---ec----------------cCCcEEEEec--CceeEEEEccC
Q psy12131 58 WIHTAPDMRAEIICNVYANP--PAKVEWFRDG--TA---IT----------------LGGRIDMHVS--SEKHSLLVRHI 112 (245)
Q Consensus 58 ~~~~~~g~~~~l~C~~~~~~--~~~~~w~~~~--~~---~~----------------~~~~~~~~~~--~~~~~l~i~~~ 112 (245)
.+.+.+|+.+.|.|.+.+.+ .+.+.|++.. .. +. ...++.+... .....|.|.++
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 88 (222)
T 1q9r_B 9 GGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNTL 88 (222)
T ss_dssp CCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEECSC
T ss_pred ceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEECcC
Confidence 45678999999999998765 5789999842 11 10 1235555432 34568999999
Q ss_pred CCCCCeEEEEEEEeCCc-----ee--EEEEEEEecC-CCCccccC---ccccCCCeeEEEEEeCCC-CCceEEEEEEEee
Q psy12131 113 KDTDFGNYMCQASNNLG-----SS--QQFIQLSGIP-NIPVFQKS---SRRLGPDGYRLVWQVDTY-SGIIQYLLKFRER 180 (245)
Q Consensus 113 ~~~d~g~y~C~~~n~~g-----~~--~~~~~~~~~~-~~p~~~~~---~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~ 180 (245)
+.+|.|.|.|.+.+..+ .. ...+.+...+ .+|.+... .....++.+.|.|.+.+. +....+ .|+++.
T Consensus 89 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v-~W~~~g 167 (222)
T 1q9r_B 89 RAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTV-TWNSGS 167 (222)
T ss_dssp CGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCCSCCCCSSEEEEEEEEEEEBSSCCEE-EEGGGT
T ss_pred CcccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccccccccCCCcEEEEEEEccEECCCCEE-EEecCC
Confidence 99999999999998654 11 2233333322 23332211 123568899999999654 321122 244332
Q ss_pred cCCC--CeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCC
Q psy12131 181 EELT--PWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSR 231 (245)
Q Consensus 181 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~ 231 (245)
.... ...... ..+ .......+.|......+ ..|.|.|.|..|...
T Consensus 168 ~~~~~~~~~~~~-~~~----~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~ 214 (222)
T 1q9r_B 168 LSSGVHTFPAVL-QSD----LYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTK 214 (222)
T ss_dssp BCTTEEEEEEEE-ETT----EEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEE
T ss_pred eEcceEeccccc-cCC----cEEEEEEEEECchhcCC-CeEEEEEEccCCCCc
Confidence 2100 011110 000 00111356777776444 556666999998643
No 434
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.41 E-value=4e-12 Score=90.04 Aligned_cols=112 Identities=16% Similarity=0.167 Sum_probs=72.0
Q ss_pred cceEEecCCCeEEEEEEEeec--CCCeEEEEECC--E--E-e-------------ccCCcEEEEecCceeEEEEccCCCC
Q psy12131 56 KQWIHTAPDMRAEIICNVYAN--PPAKVEWFRDG--T--A-I-------------TLGGRIDMHVSSEKHSLLVRHIKDT 115 (245)
Q Consensus 56 ~~~~~~~~g~~~~l~C~~~~~--~~~~~~w~~~~--~--~-~-------------~~~~~~~~~~~~~~~~l~i~~~~~~ 115 (245)
+..+.+.+|+.+.|.|.+.+. +.+.+.|++.. . . + ....++.+...+....|.|.+++.+
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 85 (215)
T 3nl4_H 6 SGGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTTE 85 (215)
T ss_dssp ECCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCGG
T ss_pred CCCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCcc
Confidence 335668899999999999863 35689998721 1 1 1 1234565555556678999999999
Q ss_pred CCeEEEEEEEeCCce----eEEEEEEEec---CCCCccc---cCccccCCCeeEEEEEeCCC
Q psy12131 116 DFGNYMCQASNNLGS----SQQFIQLSGI---PNIPVFQ---KSSRRLGPDGYRLVWQVDTY 167 (245)
Q Consensus 116 d~g~y~C~~~n~~g~----~~~~~~~~~~---~~~p~~~---~~~~~~~~~~~~l~~~~~~~ 167 (245)
|.|.|.|.+.+..+. ......+.+. +.+|.+. .......++.+.|.|.+.+.
T Consensus 86 D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~~~ 147 (215)
T 3nl4_H 86 DTATYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGCLVKGY 147 (215)
T ss_dssp GCEEEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCCTTCCC--CEEEEEEEEEE
T ss_pred cCEEEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCCccccCCCcEEEEEEEeee
Confidence 999999999987542 2222233333 2233332 11234568899999999654
No 435
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.41 E-value=2.5e-12 Score=90.60 Aligned_cols=125 Identities=13% Similarity=0.131 Sum_probs=75.6
Q ss_pred cceEEEee-----cceEEEeccCCCCCEEEEEEEEcCCC---------Cc-eeeEEEEEEecCCeEEeecceEEecCCCe
Q psy12131 2 KEIELLYN-----RESLDLDRVTLKLAGLYQCIASNNIG---------ES-TSKNFIVNVIYPPEVSVEKQWIHTAPDMR 66 (245)
Q Consensus 2 ~~~~~~~~-----~~~L~i~~~~~~d~G~Y~C~~~~~~~---------~~-~~~~~~l~v~~~p~~~~~~~~~~~~~g~~ 66 (245)
+|+.+..+ ..+|.|.+++.+|+|.|.|.+.+..+ .. ......|.|...+.....| .+.+..+ .
T Consensus 57 ~R~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~p~~~~~~~~~~~~~t~L~V~~~~~~~~~P-~v~~~~~-~ 134 (207)
T 1ypz_E 57 GRLKSAFDSKERRYSTLHIRDAQLEDSGTYFCAADTWHISEGYELGTDKLVFGQGTQVTVEPKSQPPAKP-SVFIMKN-G 134 (207)
T ss_dssp TTEEEEECTTTCSEEEEEECSCCGGGCEEEEEEEECBCCCTTCCCCCCCCEECCCEEEEEECCCCCCCCC-EEEEEEE-T
T ss_pred CCEEEEeccCCCCEEEEEECCCCHHHCEEEEEEEecCCcccccccccceeeecCccEEEEccCCCCCCCC-eEEEeCC-C
Confidence 56666643 35699999999999999999997642 10 1133567776422111122 1211112 2
Q ss_pred EEEEEEEeec-CC-CeEEEEECCEEeccCCcEEEEecCceeEEEEccCCC-CCCeEEEEEEEeCCcee
Q psy12131 67 AEIICNVYAN-PP-AKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKD-TDFGNYMCQASNNLGSS 131 (245)
Q Consensus 67 ~~l~C~~~~~-~~-~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~-~d~g~y~C~~~n~~g~~ 131 (245)
+.|.|.+.+. |. +.+.|+++ ..+............ ..+.+..... .+.|.|+|.+.|..+..
T Consensus 135 ~~l~C~~~g~~P~~~~v~W~~~-~~l~~~~~~~~~~~~--g~y~~~~~~~~~~~~~ytC~v~~~~~~~ 199 (207)
T 1ypz_E 135 TNVACLVKDFYPKEVTISLRSS-KKIVEFDPAIVISPS--GKYSAVKLGQYGDSNSVTCSVQHNSETV 199 (207)
T ss_dssp TEEEEEEEEESSSCCEEEEECS-SEEEECCCEEEECTT--SSEEEEECEEESSTTTCEEEEEETTEEE
T ss_pred CeEEEEEeeEeCCCeEEEEecC-CcccCCccceEEcCC--CcEEEEEeecccCCCcEEEEEEECCccE
Confidence 6899999875 44 69999998 665543222111211 2344433333 56899999999987643
No 436
>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}
Probab=99.41 E-value=4.6e-12 Score=79.58 Aligned_cols=94 Identities=19% Similarity=0.157 Sum_probs=72.4
Q ss_pred cCCCCccccCcc-ccCCCeeEEEEEeC--CCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCce
Q psy12131 140 IPNIPVFQKSSR-RLGPDGYRLVWQVD--TYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQ 216 (245)
Q Consensus 140 ~~~~p~~~~~~~-~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~ 216 (245)
.|.+|....... .....++.|.|.+. .++++.+|.|+|+... ...|...... ...+.+.+|.+++.
T Consensus 7 ~P~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~-~~~~~~~~~~----------~~~~~l~~L~p~t~ 75 (108)
T 2dm4_A 7 GPDAPRNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSRSG-SKMWASQRAA----------SNFTEIKNLLVNTL 75 (108)
T ss_dssp CTTSCEEEEEECCTTCSSCEEEEEECCSCCSSCEEEEEEEEEETT-CSCCEEEEES----------SSEEEECSCCSSCE
T ss_pred CCcCCcCeEEEEeccCCCEEEEEEcCCCCCCCcEEEEEEEEEECC-CCCeEEecCC----------ccEEEeCCCCCCCE
Confidence 345555443221 14677999999984 4568999999999875 5567655332 16799999999999
Q ss_pred EEEEEEEEecCCCCCCCcceEEecCCCC
Q psy12131 217 YEASVLAKNRFGWSRPSKAYVFATEGAE 244 (245)
Q Consensus 217 y~~~v~a~N~~G~~~~s~~~~~~t~~~~ 244 (245)
|.|+|.|.|..|.|.+|..+.++|..+.
T Consensus 76 Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 103 (108)
T 2dm4_A 76 YTVRVAAVTSRGIGNWSDSKSITTIKGS 103 (108)
T ss_dssp EEEEEEEEESSCEEEECCCEEEECCSCS
T ss_pred EEEEEEEECCCceeCCCCCEEEECCCCC
Confidence 9999999999999999999999997653
No 437
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.41 E-value=4.2e-13 Score=94.55 Aligned_cols=110 Identities=16% Similarity=0.114 Sum_probs=67.7
Q ss_pred CCCCEEEEEEEEcCCCCc-eeeEEEE--EEecCCeEEeecceEEecCCCeEEEEEEEeec-CC-CeEEEEECCEEeccCC
Q psy12131 20 LKLAGLYQCIASNNIGES-TSKNFIV--NVIYPPEVSVEKQWIHTAPDMRAEIICNVYAN-PP-AKVEWFRDGTAITLGG 94 (245)
Q Consensus 20 ~~d~G~Y~C~~~~~~~~~-~~~~~~l--~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~~-~~~~w~~~~~~~~~~~ 94 (245)
.+|+|.|+|.|.|..+.. ..+.+.+ .+..+|.+...+.......+..+.|.|.+.|. |. +.+.|++++..+....
T Consensus 77 ~~d~g~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~ 156 (207)
T 1l6x_A 77 WLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYK 156 (207)
T ss_dssp HHTTCCEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEE
T ss_pred ccCCceEEEEEEcCcCCcceEEEeccCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeCeECCCeEEEEEECCeeccCcc
Confidence 344999999999987652 2233322 34467776654432222346679999999985 44 3899999998765321
Q ss_pred cEEEE-ecCc----eeEEEEccCCCCCCeEEEEEEEeCCc
Q psy12131 95 RIDMH-VSSE----KHSLLVRHIKDTDFGNYMCQASNNLG 129 (245)
Q Consensus 95 ~~~~~-~~~~----~~~l~i~~~~~~d~g~y~C~~~n~~g 129 (245)
..... ..+. .+.|.+......|.|.|+|.+.|...
T Consensus 157 ~~~~~~~~~gt~~~~s~l~i~~~~~~~~g~YtC~a~n~~l 196 (207)
T 1l6x_A 157 TTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 196 (207)
T ss_dssp ECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred ccCceECCCCCEEEEEEEEECHHHcCCCCEEEEEEEcCCc
Confidence 11111 1111 12344555444578999999999753
No 438
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.40 E-value=8.4e-13 Score=84.26 Aligned_cols=87 Identities=21% Similarity=0.368 Sum_probs=64.1
Q ss_pred ecCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCC-----cEEEEecCceeEEE--EccCCCCCCeE
Q psy12131 47 IYPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGG-----RIDMHVSSEKHSLL--VRHIKDTDFGN 119 (245)
Q Consensus 47 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~-----~~~~~~~~~~~~l~--i~~~~~~d~g~ 119 (245)
..+|.+...+....+..|+.+.|.|.+.|.|.|.+.|++++..+.... .......+....+. +.++..+|.|.
T Consensus 7 ~~pP~i~~~p~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~D~G~ 86 (117)
T 2v9t_A 7 DFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGV 86 (117)
T ss_dssp CEEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCSSCSEEECTTSCEEESSCCCBTTBCSSCEE
T ss_pred cCCCeeEcCCCCEEEcCCCcEEEEEECCccCCCeEEEEECCEeccccCCCCcceeEEecCCcEEEEEEEeCCCCcCcCEE
Confidence 357788777778889999999999999999999999999998876442 12222222111111 22557899999
Q ss_pred EEEEEEeCCceeEE
Q psy12131 120 YMCQASNNLGSSQQ 133 (245)
Q Consensus 120 y~C~~~n~~g~~~~ 133 (245)
|.|.+.|..|....
T Consensus 87 Y~C~a~N~~G~~~s 100 (117)
T 2v9t_A 87 YVCVARNYLGEAVS 100 (117)
T ss_dssp EEEEEEETTEEEEC
T ss_pred EEEEEEeCccceEe
Confidence 99999999997654
No 439
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.40 E-value=1.7e-12 Score=80.88 Aligned_cols=78 Identities=14% Similarity=0.299 Sum_probs=65.0
Q ss_pred cCCeEEeecce-EEecCCCeEEEEEEEeecCCCeEEEEECCEEeccC-CcEEEEecCceeEEEEccCCCCCCeEEEEEEE
Q psy12131 48 YPPEVSVEKQW-IHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLG-GRIDMHVSSEKHSLLVRHIKDTDFGNYMCQAS 125 (245)
Q Consensus 48 ~~p~~~~~~~~-~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 125 (245)
.+|.+...+.. ..+.+|+.+.|.|.+ +.|.+.+.|++++..+... .++.+...+....|.|.++..+|.|.|.|.+.
T Consensus 14 ~~p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 92 (104)
T 1pd6_A 14 KSTAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEVKWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQCVVG 92 (104)
T ss_dssp TTSSCSEECCSEEEEETTSCEEEEEEC-SSSSSCCEEEESSSEECCCSSSSEEEEETTEEEEEECSCSSSSCEEEEEEET
T ss_pred CCCEEEEcCCCcEEEecCCCEEEEEEE-cCCCCEEEEEECCEECCCCCCeEEEEecCCEEEEEECCCCcccCEEEEEEEC
Confidence 45666555444 778899999999999 6888899999999988876 67777766667799999999999999999995
Q ss_pred e
Q psy12131 126 N 126 (245)
Q Consensus 126 n 126 (245)
+
T Consensus 93 ~ 93 (104)
T 1pd6_A 93 G 93 (104)
T ss_dssp T
T ss_pred C
Confidence 4
No 440
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=99.40 E-value=7.8e-10 Score=84.66 Aligned_cols=208 Identities=14% Similarity=0.118 Sum_probs=127.0
Q ss_pred ecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEE--ecCCCeEEEEEEEeecCCC--eEEEE
Q psy12131 9 NRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIH--TAPDMRAEIICNVYANPPA--KVEWF 84 (245)
Q Consensus 9 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~--~~~g~~~~l~C~~~~~~~~--~~~w~ 84 (245)
....+.|.++.....-.|+..|.+..|.. .........+|. .|..+. ......+.|.+.....+.. .+.|.
T Consensus 147 ~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s--~~~~~~~~~~~~---~P~~l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~ 221 (368)
T 1fnf_A 147 SDNAVVLTNLLPGTEYVVSVSSVYEQHES--TPLRGRQKTGLD---SPTGIDFSDITANSFTVHWIAPRATITGYRIRHH 221 (368)
T ss_dssp TCCEEEECSCCTTCEEEEEEEEEETTEEC--CCEEEEEECCCC---CCEEEEEESCCSSEEEEEEECCSSCCSEEEEEEE
T ss_pred CcceEEecCCCCCCEEEEEEEEEeCCCCC--CCeEeeecCCCC---CCCccEEEEccCCEEEEEEeCCCCCcCEEEEEEe
Confidence 34458888888888778888888876643 222222222222 111121 1234566666654321111 23343
Q ss_pred ECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEEE-EEEecCCCCccccCccccCCCeeEEEEE
Q psy12131 85 RDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFI-QLSGIPNIPVFQKSSRRLGPDGYRLVWQ 163 (245)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~l~~~ 163 (245)
..+.. ..............+.+.++.+.....|+..|.|..|...... .....|.+|...... .....++.|.|.
T Consensus 222 ~~~~~---~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~~~~~~~t~p~~P~~l~~~-~~~~~sv~l~W~ 297 (368)
T 1fnf_A 222 PEHFS---GRPREDRVPHSRNSITLTNLTPGTEYVVSIVALNGREESPLLIGQQSTVSDVPRDLEVV-AATPTSLLISWD 297 (368)
T ss_dssp CSCCS---SCCEEEEEETTCCEEEEESCCTTCEEEEEEEEEETTEECCCEEEEEECCCCSCEEEEEE-EEETTEEEEEEE
T ss_pred cCCCC---CCccEEEeCCCcCEEEECCCCCCCEEEEEEEEEeCCccCCcccccccCCCCCCCeeEEE-ecCCCEEEEEee
Confidence 22110 1111222233445788899998888888889999887654433 233445555444332 346789999999
Q ss_pred eCCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCc
Q psy12131 164 VDTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSK 234 (245)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~ 234 (245)
+... ++.+|.+.|+.......+......... ..+.+.+|.+++.|.|+|.|.|..|.|..|.
T Consensus 298 ~p~~-~i~~Y~v~~~~~~~~~~~~~~~~~~~~--------~~~~~~~L~p~t~Y~~~V~A~~~~G~g~~s~ 359 (368)
T 1fnf_A 298 APAV-TVRYYRITYGETGGNSPVQEFTVPGSK--------STATISGLKPGVDYTITVYAVTGRGDSPASS 359 (368)
T ss_dssp CCSS-CCSEEEEEEEETTCCSCCEEEEEETTC--------CEEEECSCCTTCCEEEEEEEECCCSSSCCBC
T ss_pred CCCC-ccceEEEEEEECCCCCccEEEEcCCCe--------eEEEecCCCCCCEEEEEEEEeCCCCcCcccC
Confidence 8544 588999999886522233333333332 6899999999999999999999999998776
No 441
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.40 E-value=5.1e-11 Score=84.66 Aligned_cols=170 Identities=11% Similarity=0.065 Sum_probs=96.2
Q ss_pred eEEecCCCeEEEEEEEeecC--CCeEEEEECC--E---Eec--------------cCCcEEEEec--CceeEEEEccCCC
Q psy12131 58 WIHTAPDMRAEIICNVYANP--PAKVEWFRDG--T---AIT--------------LGGRIDMHVS--SEKHSLLVRHIKD 114 (245)
Q Consensus 58 ~~~~~~g~~~~l~C~~~~~~--~~~~~w~~~~--~---~~~--------------~~~~~~~~~~--~~~~~l~i~~~~~ 114 (245)
.+.+.+|+.+.|.|.+.+.+ .+.+.|++.. . .+. ...++.+... .....|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 88 (220)
T 2fbj_H 9 GGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKVRS 88 (220)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSCCG
T ss_pred CeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCCCh
Confidence 46788999999999998765 5789999732 1 110 1245655543 3456899999999
Q ss_pred CCCeEEEEEEEeCCce---eEEEEEEEecC---CCCcccc--CccccCCCeeEEEEEeCCCCCc-eEEEEEEEeecCCCC
Q psy12131 115 TDFGNYMCQASNNLGS---SQQFIQLSGIP---NIPVFQK--SSRRLGPDGYRLVWQVDTYSGI-IQYLLKFREREELTP 185 (245)
Q Consensus 115 ~d~g~y~C~~~n~~g~---~~~~~~~~~~~---~~p~~~~--~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~ 185 (245)
+|.|.|.|.+.+..+. ......|.+.. .+|.+.. ......++.+.|.|.+.+..|. .-...|+++.. .
T Consensus 89 ~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~-~-- 165 (220)
T 2fbj_H 89 EDTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLTLPPALSSDPVIIGCLIHDYFPSGTMNVTWGKSGK-D-- 165 (220)
T ss_dssp GGCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEECCCSSSCCSSEEEEEEEEEEBSCCCEEEEESCCCS-S--
T ss_pred hhCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEeecccccCCCcEEEEEEEEeEECCCcEEEEEecCCE-e--
Confidence 9999999999987542 11223444432 2333221 1223567899999999654232 11222444432 1
Q ss_pred eEEEeeCCCCCCCccee-eeEEEecCCCCCceEEEEEEEEecCCCC
Q psy12131 186 WRNIVIPSDGSLAGPIY-TQSYNITGLQLFTQYEASVLAKNRFGWS 230 (245)
Q Consensus 186 ~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~y~~~v~a~N~~G~~ 230 (245)
................. ...+.|......+...|.|.|.|..|..
T Consensus 166 ~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~ 211 (220)
T 2fbj_H 166 ITTVNFPPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPV 211 (220)
T ss_dssp CEEEECCCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCC
T ss_pred cceEecCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCce
Confidence 11000000000011111 1246666555444455566699998764
No 442
>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.40 E-value=4.6e-12 Score=81.03 Aligned_cols=94 Identities=19% Similarity=0.234 Sum_probs=71.3
Q ss_pred CCCCccccCccccCCCeeEEEEEe--CCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEE
Q psy12131 141 PNIPVFQKSSRRLGPDGYRLVWQV--DTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYE 218 (245)
Q Consensus 141 ~~~p~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~ 218 (245)
|.+|...... .....++.|.|.+ ..++++.+|.|+|+... ...|......... ...+.|.+|.+++.|.
T Consensus 18 P~~P~~l~~~-~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~-~~~~~~~~~~~~~-------~~~~~i~~L~p~t~Y~ 88 (119)
T 2ed7_A 18 PSAPRDVVPV-LVSSRFVRLSWRPPAEAKGNIQTFTVFFSREG-DNRERALNTTQPG-------SLQLTVGNLKPEAMYT 88 (119)
T ss_dssp CCCCSCCEEE-EECSSCEEEECCCCSCCSSCEEEEEEEEEESS-CCCCEEEECCCTT-------CCEEEECSCCSSSEEE
T ss_pred CcCCcceEEE-ecCCCEEEEEEeCCCCCCCcEEEEEEEEEeCC-CCcceeeEeecCC-------ceEEEeCCCCCCCEEE
Confidence 4444433322 3567899999998 34568999999998865 4445444332222 2789999999999999
Q ss_pred EEEEEEecCCCCCCCcceEEecCCC
Q psy12131 219 ASVLAKNRFGWSRPSKAYVFATEGA 243 (245)
Q Consensus 219 ~~v~a~N~~G~~~~s~~~~~~t~~~ 243 (245)
|+|.|.|..|.|.+|..+.++|.+.
T Consensus 89 ~~V~A~n~~G~g~~S~~~~~~T~~~ 113 (119)
T 2ed7_A 89 FRVVAYNEWGPGESSQPIKVATQPE 113 (119)
T ss_dssp ECCEEEESSCBCSCCCCEEEECCCC
T ss_pred EEEEEEcCCccCCCcCCEEEEeCCC
Confidence 9999999999999999999999875
No 443
>1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.40 E-value=1e-11 Score=71.50 Aligned_cols=80 Identities=25% Similarity=0.558 Sum_probs=72.2
Q ss_pred cCCCeeEEEEEeCCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCC
Q psy12131 153 LGPDGYRLVWQVDTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRP 232 (245)
Q Consensus 153 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~ 232 (245)
...++..|+|.++..+++..|++.|+.....+.|+.+.++..- ++++|.+|+++..|+++|.+.|.+|.++.
T Consensus 18 s~pdsh~iqW~~~s~s~I~eyiL~~R~k~~~g~Wke~~Ip~h~--------nSYtI~GL~P~~~YE~qv~S~~ryG~~Ev 89 (98)
T 1oww_A 18 SQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEATIPGHL--------NSYTIKGLKPGVVYEGQLISIQQYGHQEV 89 (98)
T ss_dssp SCTTCEEEEEECCSSSCEEEEEEEEEETTCSSCCEEEEECSSC--------CEEEECSCCSSEEEEEEEEEEESSSCEEE
T ss_pred CCCCccceEEecCCCCCceEEEEEEEEcCCCCceeEEEecCcc--------ceEEEecCCCCcEEEEEEEEeeccCcccc
Confidence 3478999999999999999999999998878899999998754 89999999999999999999999999999
Q ss_pred CcceEEecC
Q psy12131 233 SKAYVFATE 241 (245)
Q Consensus 233 s~~~~~~t~ 241 (245)
| ...|+|.
T Consensus 90 s-~f~FtT~ 97 (98)
T 1oww_A 90 T-RFDFTTT 97 (98)
T ss_dssp E-EEEEEEC
T ss_pred e-EEEEEec
Confidence 8 7777764
No 444
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.40 E-value=2e-11 Score=88.21 Aligned_cols=115 Identities=13% Similarity=0.190 Sum_probs=73.9
Q ss_pred EeecceEEecCCCeEEEEEEEeecCCCeEEEEEC--CEE---e-----------ccCCcEEEEe-cCceeEEEEccCCCC
Q psy12131 53 SVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRD--GTA---I-----------TLGGRIDMHV-SSEKHSLLVRHIKDT 115 (245)
Q Consensus 53 ~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~--~~~---~-----------~~~~~~~~~~-~~~~~~l~i~~~~~~ 115 (245)
...+..+.+.+|+.+.|.|.+.+.+.+.+.|++. +.. + ....++.+.. ......|.|.+++.+
T Consensus 5 ~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~ 84 (245)
T 3nfj_J 5 HQWPATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLLS 84 (245)
T ss_dssp EEECSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCGG
T ss_pred eCCCceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCChh
Confidence 3456677888999999999999888899999982 110 0 0113444332 234668999999999
Q ss_pred CCeEEEEEEEeCCc------eeEE--EEEEEe---cCCCCccccCc----cccCCCeeEEEEEeCCC
Q psy12131 116 DFGNYMCQASNNLG------SSQQ--FIQLSG---IPNIPVFQKSS----RRLGPDGYRLVWQVDTY 167 (245)
Q Consensus 116 d~g~y~C~~~n~~g------~~~~--~~~~~~---~~~~p~~~~~~----~~~~~~~~~l~~~~~~~ 167 (245)
|.|.|.|.+.+..| .... .+.+.. ...+|.+.... ....+..+.|.|.+.+.
T Consensus 85 D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~ 151 (245)
T 3nfj_J 85 DSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGF 151 (245)
T ss_dssp GCEEEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEE
T ss_pred hCEEEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccC
Confidence 99999999998322 1112 333332 22233332211 12237899999999663
No 445
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.39 E-value=1.6e-12 Score=92.88 Aligned_cols=125 Identities=16% Similarity=0.221 Sum_probs=80.9
Q ss_pred cceEEEeec----ceEEEeccCCCCCEEEEEEEEcCCC-------C-ceeeEEEEEEe----cCCeEEeecceEEecCCC
Q psy12131 2 KEIELLYNR----ESLDLDRVTLKLAGLYQCIASNNIG-------E-STSKNFIVNVI----YPPEVSVEKQWIHTAPDM 65 (245)
Q Consensus 2 ~~~~~~~~~----~~L~i~~~~~~d~G~Y~C~~~~~~~-------~-~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~ 65 (245)
+|+.+..+. .+|+|.+++.+|+|.|.|.+.+..+ . .......|.|. .+|.+...+....+..|.
T Consensus 66 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~i~~~~~~~~~~~g~ 145 (226)
T 3mlr_H 66 GQVTMSVDKSISTAYLQWTTLQASDTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSSGTTKGPSVFPLAPSSKSTSGG 145 (226)
T ss_dssp TTBEEEEEGGGTEEEEEESSCCGGGCEEEEEEEEEEEESSSEEEEEEEECCCEEEEECCCCCBCCEEEEEEEEECSTTSS
T ss_pred CcEEEEecCCCCEEEEEECCCCcccCEEEEEeEccCCCcccccchhhhhCCccEEeeccCCCCCCcEEEecCcccccCCC
Confidence 466666433 3499999999999999999986421 0 01122356664 355555433344456899
Q ss_pred eEEEEEEEeec-C-CCeEEEEECCEEecc-----------CCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeE
Q psy12131 66 RAEIICNVYAN-P-PAKVEWFRDGTAITL-----------GGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQ 132 (245)
Q Consensus 66 ~~~l~C~~~~~-~-~~~~~w~~~~~~~~~-----------~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~ 132 (245)
.+.|.|.+.+. | .+.+.| ++..+.. +..+.+ .+.|.|......| |.|+|.+.+..+...
T Consensus 146 ~~~l~C~~~~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~-----~s~L~i~~~~~~~-~~ytC~v~h~~~~~~ 217 (226)
T 3mlr_H 146 TAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSL-----SSVVTVPSSSLGT-QTYICNVNHKPSNTK 217 (226)
T ss_dssp EEEEEEEEEEEBSSCCEEEE--GGGTCCTTEEECCCEECTTSCEEE-----EEEEEEEGGGTTT-CCCEEEEEEGGGTEE
T ss_pred CEEEEEEEEEEECCCeEEEE--CCccccCCeEeCCcEECCCCCEEE-----EEEEEECHhHcCC-CeEEEEEEECCCCcC
Confidence 99999999874 4 357999 3322211 112221 2468888888888 999999999876544
Q ss_pred EE
Q psy12131 133 QF 134 (245)
Q Consensus 133 ~~ 134 (245)
..
T Consensus 218 ~~ 219 (226)
T 3mlr_H 218 VD 219 (226)
T ss_dssp EE
T ss_pred eE
Confidence 43
No 446
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=99.39 E-value=4.7e-10 Score=83.07 Aligned_cols=206 Identities=16% Similarity=0.146 Sum_probs=126.0
Q ss_pred cceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceE--EecCCCeEEEEEEEeecCCC--eEEEEE
Q psy12131 10 RESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWI--HTAPDMRAEIICNVYANPPA--KVEWFR 85 (245)
Q Consensus 10 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~--~~~~g~~~~l~C~~~~~~~~--~~~w~~ 85 (245)
...+.|.++...-...|+..|.+..|........+.....| ..+..+ .......+.|.+.....+.. .+.|..
T Consensus 73 ~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~~~~~t~~~~---~~P~~l~~~~~~~~sv~l~W~~p~~~~~~Y~v~~~~ 149 (290)
T 3r8q_A 73 SSSVVVSGLMVATKYEVSVYALKDTLTSRPAQGVVTTLENV---SPPRRARVTDATETTITISWRTKTETITGFQVDAVP 149 (290)
T ss_dssp CCEEEECSCCSSCEEEEEEEEEETTEECCCEEEEEECCCCC---CCCEEEEEEEECSSCEEEEEECCSCCCCEEEEEEEE
T ss_pred ccEEEeCCCCCCCEEEEEEEEEeCCCCCCCcceeEecCCCC---CCCceeEEEEcCCCeEEEEEeCCCCcccEEEEEEEE
Confidence 45688889988888888888888776532222222211112 111111 12234556665554321111 233332
Q ss_pred CCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEE-EEEEEecCCCCccccCccccCCCeeEEEEEe
Q psy12131 86 DGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQ-FIQLSGIPNIPVFQKSSRRLGPDGYRLVWQV 164 (245)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~~ 164 (245)
.+. ..............+.+.++.+.....+...+.|..|.... .+.....|.+|...... .....++.|.|.+
T Consensus 150 ~~~----~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~~~~~t~p~~P~~l~~~-~~~~~sv~l~W~~ 224 (290)
T 3r8q_A 150 ANG----QTPIQRTIKPDVRSYTITGLQPGTDYKIYLYTLNDNARSSPVVIDASTAIDAPSNLRFL-ATTPNSLLVSWQP 224 (290)
T ss_dssp SSS----CCCEEEEECTTCSEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCEEEEEE-EEETTEEEEEEEC
T ss_pred CCC----CcceEEecCCCccEEEECCCCCCCEEEEEEEEEeCCcccCCEEEEecCCCCCCCccEEE-eeCCCEEEEEEeC
Confidence 221 11222233334557889999998888888899998776443 33444455666544332 3567899999998
Q ss_pred CCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCC
Q psy12131 165 DTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRP 232 (245)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~ 232 (245)
.. +++.+|.+.|+... ...|......... ...+.+.+|.+++.|.|+|.|.|..|.|.+
T Consensus 225 p~-~~~~~Y~v~~~~~~-~~~~~~~~~~~~~-------~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p 283 (290)
T 3r8q_A 225 PR-ARITGYIIKYEKPG-SPPREVVPRPRPG-------VTEATITGLEPGTEYTIYVIALKNNQKSEP 283 (290)
T ss_dssp CS-SCCCEEEEEEECTT-SCCEECSSCCCTT-------CCEEEECSCCTTCEEEEEEEEEETTEECCC
T ss_pred CC-CcccEEEEEEEeCC-CCcceeEeccCCC-------ccEEEECCCCCCCEEEEEEEEEeCCCcCCc
Confidence 54 37889999998864 4444322111111 278999999999999999999999999876
No 447
>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.39 E-value=1.8e-12 Score=84.00 Aligned_cols=100 Identities=21% Similarity=0.337 Sum_probs=73.2
Q ss_pred EEecCCCCccccCccccCCCeeEEEEEeC--CCCCceEEEEEEEeec-CCCCeEEEeeCCCCCCCcceeeeEEEecCCCC
Q psy12131 137 LSGIPNIPVFQKSSRRLGPDGYRLVWQVD--TYSGIIQYLLKFRERE-ELTPWRNIVIPSDGSLAGPIYTQSYNITGLQL 213 (245)
Q Consensus 137 ~~~~~~~p~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~ 213 (245)
+...|.+|...... .....++.|.|.+. ++.++.+|.|+|+... ....|..+....... .. .+.+|.+
T Consensus 13 v~~~P~~P~~~~~~-~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~w~~~~~~~~~~-------~~-~i~~L~p 83 (127)
T 1uey_A 13 VYDVPNPPFDLELT-DQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQ-------TT-AQLNLSP 83 (127)
T ss_dssp CCCSCCCCEEEEEE-CCSSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEEEEESSC-------CE-EEECCCT
T ss_pred eecCCcCCCCcEEE-EccCCEEEEEEECCCCCCCCceEEEEEEEECCCCCCccEEEeeeCCCc-------eE-EEecCCC
Confidence 33456666654432 35678999999983 5678999999998764 356787654322211 23 4669999
Q ss_pred CceEEEEEEEEecCCCCCCCcc-eEEecCCCCC
Q psy12131 214 FTQYEASVLAKNRFGWSRPSKA-YVFATEGAET 245 (245)
Q Consensus 214 ~~~y~~~v~a~N~~G~~~~s~~-~~~~t~~~~~ 245 (245)
++.|.|||.|.|..|.|.+|.. ..++|.+.+|
T Consensus 84 ~t~Y~frV~A~n~~G~s~~S~~~~~~~T~~~~P 116 (127)
T 1uey_A 84 YVNYSFRVMAVNSIGKSLPSEASEQYLTKASEP 116 (127)
T ss_dssp TCEECCEEEEEESSCBCCCCSCCCCEECCCSSC
T ss_pred CCEEEEEEEEEeCCccCCccccccceEcCCCCC
Confidence 9999999999999999999998 5888877643
No 448
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.39 E-value=4.3e-12 Score=90.22 Aligned_cols=168 Identities=12% Similarity=0.096 Sum_probs=94.1
Q ss_pred ceEEecCCCeEEEEEEEeecC--CCeEEEEECC--EE---e-c---------------cCCcEEEEec--CceeEEEEcc
Q psy12131 57 QWIHTAPDMRAEIICNVYANP--PAKVEWFRDG--TA---I-T---------------LGGRIDMHVS--SEKHSLLVRH 111 (245)
Q Consensus 57 ~~~~~~~g~~~~l~C~~~~~~--~~~~~w~~~~--~~---~-~---------------~~~~~~~~~~--~~~~~l~i~~ 111 (245)
..+.+.+|+.+.|.|.+.+.+ .+.+.|++.. .. + . ...++.+... .....|.|.+
T Consensus 8 ~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 87 (220)
T 1pz5_B 8 GGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMNN 87 (220)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEECS
T ss_pred CCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEcc
Confidence 345788999999999998766 6799999842 11 1 0 0245555432 2355899999
Q ss_pred CCCCCCeEEEEEEEeCCce-----eEEEEEEEec-CCCCcccc---CccccCCCeeEEEEEeCCC-CCceEEEEEEEeec
Q psy12131 112 IKDTDFGNYMCQASNNLGS-----SQQFIQLSGI-PNIPVFQK---SSRRLGPDGYRLVWQVDTY-SGIIQYLLKFRERE 181 (245)
Q Consensus 112 ~~~~d~g~y~C~~~n~~g~-----~~~~~~~~~~-~~~p~~~~---~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~ 181 (245)
++.+|.|.|.|.+.+..+. ....+.+... +.+|.+.. ......++.+.|.|.+.+. ++...+ .|+++..
T Consensus 88 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v-~W~~~~~ 166 (220)
T 1pz5_B 88 LRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPEPVTV-KWNYGAL 166 (220)
T ss_dssp CCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCSCCSCSSSEEEEEEEEEEBSSCCEE-EEGGGTC
T ss_pred CCHHHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcccccccCCCCcEEEEEEEEEEeCCCeEE-EEecCCc
Confidence 9999999999999997532 1123333322 22343221 1234568899999999654 322122 2333321
Q ss_pred CCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCC
Q psy12131 182 ELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGW 229 (245)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~ 229 (245)
...... .+.......-.....+.|......+ ..|.|.|.|..|.
T Consensus 167 -~~~~~~--~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~ 210 (220)
T 1pz5_B 167 -SSGVRT--VSSVLQSGFYSLSSLVTVPSSTWPS-QTVICNVAHPASK 210 (220)
T ss_dssp -CTTEEE--CCCEEETTEEEEEEEEEECGGGTTT-SCCEEEEEEGGGT
T ss_pred -ccceEE--cCCcccCCeEEEEEEEEEcchhcCC-ceEEEEEEECCcc
Confidence 100000 0000000000012446666554333 5556669999984
No 449
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.39 E-value=3.6e-12 Score=96.84 Aligned_cols=167 Identities=14% Similarity=0.120 Sum_probs=97.4
Q ss_pred ceEEecCCCeEEEEEEEeecC--CCeEEEEEC--CEEec-----------------cCCcEEEEec--CceeEEEEccCC
Q psy12131 57 QWIHTAPDMRAEIICNVYANP--PAKVEWFRD--GTAIT-----------------LGGRIDMHVS--SEKHSLLVRHIK 113 (245)
Q Consensus 57 ~~~~~~~g~~~~l~C~~~~~~--~~~~~w~~~--~~~~~-----------------~~~~~~~~~~--~~~~~l~i~~~~ 113 (245)
..+.+.+|+.+.|.|.+.+.+ .+.+.|+++ +..+. ...++.+..+ .....|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 87 (344)
T 1za6_B 8 GAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSSLR 87 (344)
T ss_dssp CCEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECSCC
T ss_pred CCeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECCCC
Confidence 346788999999999998863 578999985 32210 1245555432 345789999999
Q ss_pred CCCCeEEEEEEEeCCceeEEEEEEEec---CCCCcccc---CccccCCCeeEEEEEeCCCCCc-eEEEEEEEeecCCCCe
Q psy12131 114 DTDFGNYMCQASNNLGSSQQFIQLSGI---PNIPVFQK---SSRRLGPDGYRLVWQVDTYSGI-IQYLLKFREREELTPW 186 (245)
Q Consensus 114 ~~d~g~y~C~~~n~~g~~~~~~~~~~~---~~~p~~~~---~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~ 186 (245)
.+|.|.|.|.+.|..+.......|.+. +.+|.+.. ......++.+.|.|.+.+..|. ..+ .|+++.. ...-
T Consensus 88 ~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v-~W~k~g~-~~~~ 165 (344)
T 1za6_B 88 SEDTAVYFCTRSLNMAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTV-SWNSGAL-TSGV 165 (344)
T ss_dssp GGGCEEEEEEETTTTCEECCCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCE-EETTTTB-CTTE
T ss_pred cccCEEEEEEEecCcceecCcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEEeeEECCCeEE-EEecCCc-cCce
Confidence 999999999999965443333444443 23333221 1234678899999999654221 122 2333322 1100
Q ss_pred EEE--eeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCC
Q psy12131 187 RNI--VIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGW 229 (245)
Q Consensus 187 ~~~--~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~ 229 (245)
... .....+ .-.....+.|..+...+ ..|+|.|.|..|.
T Consensus 166 ~~~~~~~~~~~---~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~ 206 (344)
T 1za6_B 166 HTFPAVLQSSG---LYSLSSVVTVPSSSLGT-QTYICNVNHKPSN 206 (344)
T ss_dssp EECCCEECTTS---CEEEEEEEEEETTHHHH-BCEEEEEEEGGGT
T ss_pred eECCCeECCCC---CEEEEEEEEEcHHHcCC-CcEEEEEEeCCCC
Confidence 000 000110 00112356777765444 6666669999875
No 450
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.39 E-value=7.9e-13 Score=93.93 Aligned_cols=118 Identities=16% Similarity=0.226 Sum_probs=74.9
Q ss_pred CCeEEeecceEE--ecCCCeEEEEEEEeecC---C-CeEEEEECCEEeccCCcEEEEe-cC----ceeEEEEccCCCCCC
Q psy12131 49 PPEVSVEKQWIH--TAPDMRAEIICNVYANP---P-AKVEWFRDGTAITLGGRIDMHV-SS----EKHSLLVRHIKDTDF 117 (245)
Q Consensus 49 ~p~~~~~~~~~~--~~~g~~~~l~C~~~~~~---~-~~~~w~~~~~~~~~~~~~~~~~-~~----~~~~l~i~~~~~~d~ 117 (245)
+|.+...+.... +.+|+.+.|.|.+.+.+ . +.+.|++++..+.......... .+ ..+.|.|.++..+|.
T Consensus 9 ~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~ 88 (218)
T 2rgs_A 9 GPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMSG 88 (218)
T ss_dssp CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHHTT
T ss_pred CCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcCCC
Confidence 455544443333 67899999999999873 3 7999999997665321111100 01 135799999999999
Q ss_pred eEEEEEEEeCCcee--EEEEEE-EecCCCCccccC---ccccCCCeeEEEEEeCC
Q psy12131 118 GNYMCQASNNLGSS--QQFIQL-SGIPNIPVFQKS---SRRLGPDGYRLVWQVDT 166 (245)
Q Consensus 118 g~y~C~~~n~~g~~--~~~~~~-~~~~~~p~~~~~---~~~~~~~~~~l~~~~~~ 166 (245)
|.|.|.+.|..+.. ...+.+ .....+|.+... .....+..+.|.|.+.+
T Consensus 89 g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g 143 (218)
T 2rgs_A 89 KEFKCKVNNKDLPSPIERTISKIKGLVRAPQVYILPPPAEQLSRKDVSLTCLVVG 143 (218)
T ss_dssp CCEEEEEEETTCSSCEEEEECCCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEE
T ss_pred CeEEEEEECCcCCCcceEEEeecCCCCCCCEEEEECCChHHhcCCceEEEEEEEe
Confidence 99999999987643 233221 122234433211 11235789999999976
No 451
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=99.39 E-value=1.1e-11 Score=94.14 Aligned_cols=120 Identities=23% Similarity=0.277 Sum_probs=80.3
Q ss_pred eecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEE-ecCCC-eEEEEEEEeec-CC--CeEE
Q psy12131 8 YNRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIH-TAPDM-RAEIICNVYAN-PP--AKVE 82 (245)
Q Consensus 8 ~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~-~~~g~-~~~l~C~~~~~-~~--~~~~ 82 (245)
.++.+|+|.+++.+|+|.|+|.+.+..+. ....+.|.|..+|.+...+.... +..|+ .+.|.|.+.+. |. +.+.
T Consensus 251 ~g~~sL~I~~v~~~D~G~Y~C~v~~~~~~-~~~~v~L~V~~pP~V~v~p~~~~~~~~G~~~vtL~C~a~GfyP~~~~~Vt 329 (401)
T 3f8u_B 251 TGNGTFWLPRVQPFQEGTYLATIHLPYLQ-GQVTLELAVYKPPKVSLMPATLARAAPGEAPPELLCLVSHFYPSGGLEVE 329 (401)
T ss_dssp EEEEEEEETTCCGGGCEEEEEEEEETTEE-EEEEEEEEEEBCCEEEEESSSCCCCCTTCCCCCEEEEEEEEBSSTTCEEE
T ss_pred CCcEEEEECcCCHhhCceEEEEEEecccc-eeEEEEEeeccCCeEeeccCcceeecCCCccEEEEEEecCCcCCCCcEEE
Confidence 45677999999999999999999987665 56788899999999877654433 34676 79999999885 55 6899
Q ss_pred EE-ECC---EEeccCCcE----EEEecCc----eeEEEEccCCC-CCCeEEEEEEEeCC
Q psy12131 83 WF-RDG---TAITLGGRI----DMHVSSE----KHSLLVRHIKD-TDFGNYMCQASNNL 128 (245)
Q Consensus 83 w~-~~~---~~~~~~~~~----~~~~~~~----~~~l~i~~~~~-~d~g~y~C~~~n~~ 128 (245)
|. +++ ..+...... .....+. .+.|.+..... .+.+.|+|.+.+..
T Consensus 330 W~~rdg~~g~~~~~~~~~~~s~~~~~~DGTysvsS~L~V~~~~~e~~g~~YTC~V~H~s 388 (401)
T 3f8u_B 330 WELRGGPGGRSQKAEGQRWLSALRHHSDGSVSLSGHLQPPPVTTEQHGARYACRIHHPS 388 (401)
T ss_dssp EEEESSSSCSCEECCSEEEECCCEECTTSCEEEEEEEECCCCCGGGTTCEEEEEEECTT
T ss_pred EEecCCCCCceecccccccccccccCCCceEEEEEEEEEccCccccCCCEEEEEEEcCC
Confidence 95 765 111111100 0111111 23455544322 24469999999875
No 452
>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.38 E-value=5.9e-12 Score=78.79 Aligned_cols=94 Identities=22% Similarity=0.284 Sum_probs=72.9
Q ss_pred cCCCCccccCccccCCCeeEEEEEeC--CCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceE
Q psy12131 140 IPNIPVFQKSSRRLGPDGYRLVWQVD--TYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQY 217 (245)
Q Consensus 140 ~~~~p~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y 217 (245)
.|.+|..... ......++.|.|.+. .++++.+|.|+|+... ...|..+.... ..+.|.+|.+++.|
T Consensus 7 ~P~~P~~l~~-~~~~~~si~l~W~~p~~~~g~i~~Y~v~~~~~~-~~~~~~~~~~~----------~~~~i~~L~p~t~Y 74 (106)
T 2ed8_A 7 GPGPVENLQA-VSTSPTSILITWEPPAYANGPVQGYRLFCTEVS-TGKEQNIEVDG----------LSYKLEGLKKFTEY 74 (106)
T ss_dssp CCCCCEEEEE-ECSSTTEEEEEEECCSSCSSCCCEEEEEEEETT-TCCEEEEEECS----------SCEEEESCCTTCEE
T ss_pred CCcCCceeEE-EecCCCEEEEEECCCCCCCCCeeEEEEEEEECC-CCceEEEeCCc----------cEEEECCCCCCCEE
Confidence 3455544433 235677999999984 3468999999998865 55666554431 67899999999999
Q ss_pred EEEEEEEecCCCCCCCcceEEecCCCCC
Q psy12131 218 EASVLAKNRFGWSRPSKAYVFATEGAET 245 (245)
Q Consensus 218 ~~~v~a~N~~G~~~~s~~~~~~t~~~~~ 245 (245)
.|+|.|.|..|.|.+|..+.++|....|
T Consensus 75 ~~~V~A~n~~G~g~~S~~~~~~T~~~~P 102 (106)
T 2ed8_A 75 SLRFLAYNRYGPGVSTDDITVVTLSDSG 102 (106)
T ss_dssp EEEEEEECSSCEEEECCCEEEECCCCCC
T ss_pred EEEEEEEeCCccCCCcCCEEEEcCCCCC
Confidence 9999999999999999999999987643
No 453
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.38 E-value=2.2e-11 Score=87.95 Aligned_cols=117 Identities=12% Similarity=0.092 Sum_probs=74.2
Q ss_pred CeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEE--------------CCEEeccC----CcEEEEec-CceeEEEEc
Q psy12131 50 PEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFR--------------DGTAITLG----GRIDMHVS-SEKHSLLVR 110 (245)
Q Consensus 50 p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~--------------~~~~~~~~----~~~~~~~~-~~~~~l~i~ 110 (245)
+.+...+..+.+.+|+.+.|.| ..+.+.+.+.|++ ++...... .++.+... .....|.|.
T Consensus 3 ~~v~~~p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~ 81 (245)
T 4ei6_B 3 PKVLQIPSHQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQ 81 (245)
T ss_dssp CCCEEECSEEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEEC
T ss_pred cceEeCCceEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEEC
Confidence 3445566677889999999999 6677888999998 22211111 45555432 345689999
Q ss_pred cCCCCCCeEEEEEEEeCC----ceeEEEEEEEecC-----CCCccccC----ccccCCCeeEEEEEeCCC
Q psy12131 111 HIKDTDFGNYMCQASNNL----GSSQQFIQLSGIP-----NIPVFQKS----SRRLGPDGYRLVWQVDTY 167 (245)
Q Consensus 111 ~~~~~d~g~y~C~~~n~~----g~~~~~~~~~~~~-----~~p~~~~~----~~~~~~~~~~l~~~~~~~ 167 (245)
+++.+|.|.|.|.+.+.. ........+.+.. .+|..... .....+..+.|.|.+.+.
T Consensus 82 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~ 151 (245)
T 4ei6_B 82 PTALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGF 151 (245)
T ss_dssp SCCGGGCEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEE
T ss_pred CCCHhHCEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeE
Confidence 999999999999999532 2222222333321 23332211 112347899999999653
No 454
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=99.37 E-value=1.5e-09 Score=79.99 Aligned_cols=208 Identities=13% Similarity=0.036 Sum_probs=126.5
Q ss_pred ecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEecCCCeEEEEEEEeecCCC--eEEEEEC
Q psy12131 9 NRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHTAPDMRAEIICNVYANPPA--KVEWFRD 86 (245)
Q Consensus 9 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~--~~~w~~~ 86 (245)
....+.|.++.....-.++..+.+..|... ...+.+..+|...... .........+.|.+.....+.. .+.|...
T Consensus 66 ~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~--~~~~~~~t~p~~P~~l-~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~ 142 (283)
T 1tdq_A 66 PLSQYSVQALRPGSRYEVSISAVRGTNESD--ASSTQFTTEIDAPKNL-RVGSRTATSLDLEWDNSEAEAQEYKVVYSTL 142 (283)
T ss_dssp TCSEEEECSCCTTCEEEEEEEEEETTEECC--CEEEEEECCCCCCEEE-EEEEECSSCEEEEEECCSSCCSEEEEEEEET
T ss_pred CCCEEEecCCCCCCEEEEEEEEECCCCCCC--CeeEEEECCCCCCCce-EEEecCCCeEEEEecCCCCCccEEEEEEEeC
Confidence 345588888888887788888888665432 2333333332211111 1112234566666654321111 3444432
Q ss_pred CEEeccCCcEEEEecCc---eeEEEEccCCCCCCeEEEEEEEeCCceeEE-EEEEEecCCCCccccCccccCCCeeEEEE
Q psy12131 87 GTAITLGGRIDMHVSSE---KHSLLVRHIKDTDFGNYMCQASNNLGSSQQ-FIQLSGIPNIPVFQKSSRRLGPDGYRLVW 162 (245)
Q Consensus 87 ~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~~l~~ 162 (245)
+. .....+..... ...+.+.++.+.....++..+.|..|.... .+.....+.+|..... ......++.|.|
T Consensus 143 ~~----~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~~~~~t~~~~P~~l~~-~~~~~~sv~l~W 217 (283)
T 1tdq_A 143 AG----EQYHEVLVPKGIGPTTKTTLTDLVPGTEYGVGISAVMNSKQSIPATMNARTELDSPRDLMV-TASSETSISLIW 217 (283)
T ss_dssp TC----CCCEEEEEECCSSSEEEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCEEEEE-EEECSSCEEEEE
T ss_pred CC----CcceEEECCCCCcccceEEEecCCCCCEEEEEEEEEeCCCCCcceEEEecCCCCCCCccEE-eEecCCEEEEEE
Confidence 21 11112222222 567889999998888899999998775433 2333334444443332 235677899999
Q ss_pred EeCCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcc
Q psy12131 163 QVDTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKA 235 (245)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~ 235 (245)
.+. ++++.+|.+.|+... +.+......... ..+.+.+|.+++.|.|+|.|.|..|.|.++..
T Consensus 218 ~~p-~~~i~~Y~v~~~~~~--~~~~~~~~~~~~--------~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~~~ 279 (283)
T 1tdq_A 218 TKA-SGPIDHYRITFTPSS--GISSEVTVPRDR--------TSYTLTDLEPGAEYIISITAERGRQQSLESTV 279 (283)
T ss_dssp ECC-CSCCSEEEEEEECSS--SCCEEEEEESSC--------SEEEECCCCTTCCEEEEEEEEETTEECCCEEE
T ss_pred eCC-CCcccEEEEEEEcCC--CCeeEEEeCCCc--------cEEEECCCCCCCEEEEEEEEEcCCCCCcceee
Confidence 985 357889999998864 334344333332 68999999999999999999999999887644
No 455
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=99.37 E-value=6.5e-11 Score=83.54 Aligned_cols=132 Identities=20% Similarity=0.230 Sum_probs=93.9
Q ss_pred eeEEEEccCCCCCCeEEEEEEEeCCceeEE--EEEEEe---cCC-CCccccCcccc-CCCeeEEEEEeC--CCCCceEEE
Q psy12131 104 KHSLLVRHIKDTDFGNYMCQASNNLGSSQQ--FIQLSG---IPN-IPVFQKSSRRL-GPDGYRLVWQVD--TYSGIIQYL 174 (245)
Q Consensus 104 ~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~--~~~~~~---~~~-~p~~~~~~~~~-~~~~~~l~~~~~--~~~~~~~~~ 174 (245)
...+.|.++.+...+.++..+.|..|.... .+.+.. .|. +|......... ...++.|.|.+. .++++.+|.
T Consensus 63 ~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~S~~~~~~t~~~~P~~~P~~~~~~~~~~s~~sv~l~W~~p~~~~g~i~~Y~ 142 (211)
T 3p4l_A 63 TLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYI 142 (211)
T ss_dssp SSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCCCCCSCCEEEEEEEETTEEEEEEEEEECCTTCCSCCCEEE
T ss_pred ceEEEecCcCCCCEEEEEEEEEcCCCCCccceeEeeecccCCCCCCCcceEEEecCCCCCEEEEEECCCCCCCCCEEEEE
Confidence 447889999998888899999998876542 233332 232 44333322211 356999999983 346899999
Q ss_pred EEEEeecC--CCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceEEecCCC
Q psy12131 175 LKFREREE--LTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYVFATEGA 243 (245)
Q Consensus 175 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~~t~~~ 243 (245)
|.|+.... ...|......... ..+.+.+|.+++.|.|+|.|.|..|.|.+|..+.+.+...
T Consensus 143 v~~~~~~~~~~~~~~~~~~~~~~--------~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~~~~~ 205 (211)
T 3p4l_A 143 IYYSTDVNAEIHDWVIEPVVGNR--------LTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPKA 205 (211)
T ss_dssp EEEESCTTSCGGGSEEEEEESSC--------SEEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECC--
T ss_pred EEEEECCCCCCCceEEEEecCCe--------eEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEccCccc
Confidence 99997651 2234444333332 7899999999999999999999999999999999988653
No 456
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.37 E-value=1.3e-11 Score=77.42 Aligned_cols=76 Identities=13% Similarity=0.216 Sum_probs=65.0
Q ss_pred CCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCC----------cEEEEecCceeEEEEccCCCCCCe
Q psy12131 49 PPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGG----------RIDMHVSSEKHSLLVRHIKDTDFG 118 (245)
Q Consensus 49 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~----------~~~~~~~~~~~~l~i~~~~~~d~g 118 (245)
+|.+...+....+.+|+.+.|.|.+.+ .|.+.|++|+..+.... ++.+...+....|.|.++..+|.|
T Consensus 8 ~~~~~~~l~d~~v~eG~~a~f~C~vs~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~~~D~G 85 (112)
T 2e6q_A 8 TARLVAGLEDVQVYDGEDAVFSLDLST--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKHQDSG 85 (112)
T ss_dssp CCCEEECCCCEEEETTCEEEEEEEESS--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCBTTEEEEEEESCCSTTCS
T ss_pred CcEEecCCCCeEEcCCCcEEEEEEECC--CCeEEEEECCEECccCcccccccccccEEEEEeCCcEEEEEECCCCHHHCc
Confidence 466777778888999999999999986 77899999999998876 778777777789999999999999
Q ss_pred EEEEEEEe
Q psy12131 119 NYMCQASN 126 (245)
Q Consensus 119 ~y~C~~~n 126 (245)
.|.|..-+
T Consensus 86 ~Y~~~~~~ 93 (112)
T 2e6q_A 86 ALVGFSCP 93 (112)
T ss_dssp EEEEEEET
T ss_pred cEEEEEEC
Confidence 99775444
No 457
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.37 E-value=3.8e-13 Score=84.97 Aligned_cols=91 Identities=12% Similarity=0.150 Sum_probs=68.3
Q ss_pred CeEEeecceEEecCCCeEEEEEEEeec---CCCeEEEEECCE-Eecc--CCcEEEEe--cC----ceeEEEEccCCCCCC
Q psy12131 50 PEVSVEKQWIHTAPDMRAEIICNVYAN---PPAKVEWFRDGT-AITL--GGRIDMHV--SS----EKHSLLVRHIKDTDF 117 (245)
Q Consensus 50 p~~~~~~~~~~~~~g~~~~l~C~~~~~---~~~~~~w~~~~~-~~~~--~~~~~~~~--~~----~~~~l~i~~~~~~d~ 117 (245)
+.+...|..+.+.+|+.+.|.|.+.+. |.|.|.|+++.. .+.. ..++.+.. .. ....|.|.++...|.
T Consensus 13 ~~f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 92 (118)
T 2edn_A 13 GVFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGDR 92 (118)
T ss_dssp SSCSBCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTTC
T ss_pred ceEEECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhhC
Confidence 344555677788999999999999875 688999999742 1111 23344321 11 247899999999999
Q ss_pred eEEEEEEEeCCceeEEEEEEEec
Q psy12131 118 GNYMCQASNNLGSSQQFIQLSGI 140 (245)
Q Consensus 118 g~y~C~~~n~~g~~~~~~~~~~~ 140 (245)
|.|+|.+.|..|.....+.|.+.
T Consensus 93 G~Y~Cevsn~~g~~s~~~~L~V~ 115 (118)
T 2edn_A 93 GYYRLEVKAKDTCDSCGFNIDVE 115 (118)
T ss_dssp SCEEEEEECSSCEEEEEECCEEE
T ss_pred EEEEEEEEEcCCcEEEEEEEEEE
Confidence 99999999999988888777664
No 458
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.37 E-value=9e-13 Score=83.12 Aligned_cols=83 Identities=23% Similarity=0.261 Sum_probs=65.8
Q ss_pred ccCCCeeEEEEEe---CCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCC
Q psy12131 152 RLGPDGYRLVWQV---DTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFG 228 (245)
Q Consensus 152 ~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G 228 (245)
....+++.|.|.+ +++.++.+|.|+|+... ...|..+...... ...+++.+|.+++.|.|||.|.|..|
T Consensus 21 ~v~~~sv~L~W~~P~~~gg~~i~~Y~Ve~~~~~-~~~w~~~~~~~~~-------~~~~~v~~L~p~t~Y~frV~A~N~~G 92 (112)
T 1bpv_A 21 NITRHTVTLKWAKPEYTGGFKITSYIVEKRDLP-NGRWLKANFSNIL-------ENEFTVSGLTEDAAYEFRVIAKNAAG 92 (112)
T ss_dssp EEETTEEEEECCCCSCCTTCCCSCCEEEEEETT-SCCCEECCCSCCC-------SSEEEECSCCSSCCEEEEEEEECTTS
T ss_pred EeeCCEEEEEECCCCcCCCCcccEEEEEEEECC-CCceEEeecccCc-------cCEEEECCCCCCCEEEEEEEEEECCC
Confidence 3567899999995 34568999999999865 5678765432211 26799999999999999999999999
Q ss_pred C-CCCCcceEEecCC
Q psy12131 229 W-SRPSKAYVFATEG 242 (245)
Q Consensus 229 ~-~~~s~~~~~~t~~ 242 (245)
. |.+|..+.+.+..
T Consensus 93 ~~s~~S~~~~~~t~~ 107 (112)
T 1bpv_A 93 AISPPSEPSDAITCR 107 (112)
T ss_dssp CEEEEEEEEEEECSC
T ss_pred CCCCCCCCCCCEEeC
Confidence 7 9999887766654
No 459
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=99.37 E-value=1.1e-11 Score=87.41 Aligned_cols=128 Identities=16% Similarity=0.200 Sum_probs=93.1
Q ss_pred eEEEEccCCCCCCeEEEEEEEeCCceeEE--EEEEEe----cCCCCccccCccccCCCeeEEEEEeC--CCCCceEEEEE
Q psy12131 105 HSLLVRHIKDTDFGNYMCQASNNLGSSQQ--FIQLSG----IPNIPVFQKSSRRLGPDGYRLVWQVD--TYSGIIQYLLK 176 (245)
Q Consensus 105 ~~l~i~~~~~~d~g~y~C~~~n~~g~~~~--~~~~~~----~~~~p~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~ 176 (245)
..+.+.++.+...+.|++.+.|..|.... .+.+.. .|.+|.... .......++.|.|.++ .++++.+|.|+
T Consensus 68 ~~~~i~~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~T~~~~~P~~P~~~~-~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~ 146 (209)
T 2vkw_A 68 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVREPSAPKLEG-QMGEDGNSIKVNLIKQDDGGSPIRHYLVR 146 (209)
T ss_dssp SEEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECCCSCSCCCCEEEE-EECTTSSCEEEEEECCCCTTSCCCEEEEE
T ss_pred ceEEeCCCCCCCeEEEEEEEEcCCcccCCcccccccccCCCCCCCCcccc-cccccCCeEEEEEECcccCCCCCceEEEE
Confidence 46889999999999999999998876443 222222 244444322 2235678999999985 56789999999
Q ss_pred EEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceEEecCC
Q psy12131 177 FREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYVFATEG 242 (245)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~~t~~ 242 (245)
|+. . ...|......... ...+.+.+|.+++.|.|+|.|.|..|.|.+|..+.+.+..
T Consensus 147 ~~~-~-~~~~~~~~~~~~~-------~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~~~~~~~~ 203 (209)
T 2vkw_A 147 YRA-L-SSEWKPEIRLPSG-------SDHVMLKSLDWNAEYEVYVVAENQQGKSKAAHFVFRTAAA 203 (209)
T ss_dssp EEE-T-TSCCCCCEEECTT-------CCEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECC--
T ss_pred EEC-C-CCCCceeeecCCC-------ccEEEecCCCCCCEEEEEEEEEeCCccCCcchhhhhhhhh
Confidence 998 3 5556533222222 1679999999999999999999999999999888776643
No 460
>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.37 E-value=9.8e-12 Score=78.83 Aligned_cols=85 Identities=18% Similarity=0.205 Sum_probs=67.0
Q ss_pred ccCCCeeEEEEEeC----CCCCceEEEEEEEeecCC--CCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEe
Q psy12131 152 RLGPDGYRLVWQVD----TYSGIIQYLLKFREREEL--TPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKN 225 (245)
Q Consensus 152 ~~~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N 225 (245)
.....++.|+|.+. .++++.+|.|+|+..... ..|......... ..+.|.+|.+++.|.|+|.|.|
T Consensus 19 ~~~~~si~l~W~~p~~~~~~g~i~gY~v~y~~~~~~~~~~~~~~~~~~~~--------~~~~i~~L~p~t~Y~~~V~A~n 90 (114)
T 1x4y_A 19 AVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGDR--------YWHSISHLQPETSYDIKMQCFN 90 (114)
T ss_dssp CSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCEEEETTC--------CEEEECSCCTTCEEEEEEEEEC
T ss_pred ecCCCEEEEEEeCCCchhcCCccceEEEEEEECCCCCCcceeeEecCCcE--------eEEEcCCCCCCCEEEEEEEEEc
Confidence 35678999999984 457899999999876522 234322222222 6799999999999999999999
Q ss_pred cCCCCCCCcceEEecCCCC
Q psy12131 226 RFGWSRPSKAYVFATEGAE 244 (245)
Q Consensus 226 ~~G~~~~s~~~~~~t~~~~ 244 (245)
..|.|.+|..+.++|.+.+
T Consensus 91 ~~G~g~~S~~v~~~T~~~~ 109 (114)
T 1x4y_A 91 EGGESEFSNVMICETKARS 109 (114)
T ss_dssp TTCCCCCCCCEEEECCCCC
T ss_pred CCccCCCcCCEEEEeCCCC
Confidence 9999999999999998864
No 461
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.36 E-value=1.2e-10 Score=82.96 Aligned_cols=170 Identities=11% Similarity=0.070 Sum_probs=94.4
Q ss_pred eEEecCCCeEEEEEEEeecC--CCeEEEEECC--E---Eec--------------cCCcEEEEec--CceeEEEEccCCC
Q psy12131 58 WIHTAPDMRAEIICNVYANP--PAKVEWFRDG--T---AIT--------------LGGRIDMHVS--SEKHSLLVRHIKD 114 (245)
Q Consensus 58 ~~~~~~g~~~~l~C~~~~~~--~~~~~w~~~~--~---~~~--------------~~~~~~~~~~--~~~~~l~i~~~~~ 114 (245)
.+.+.+|+.+.|.|.+.+.+ .+.+.|++.. . .+. ...++.+... .....|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (223)
T 1dee_B 9 GGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSLRA 88 (223)
T ss_dssp CCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSCCG
T ss_pred CEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCCCH
Confidence 45688999999999998765 4789999832 1 110 1235555432 2356899999999
Q ss_pred CCCeEEEEEEEeCCc------eeEEEEEEEec---CCCCcccc---CccccCCCeeEEEEEeCCCCCceEEEEEEE-eec
Q psy12131 115 TDFGNYMCQASNNLG------SSQQFIQLSGI---PNIPVFQK---SSRRLGPDGYRLVWQVDTYSGIIQYLLKFR-ERE 181 (245)
Q Consensus 115 ~d~g~y~C~~~n~~g------~~~~~~~~~~~---~~~p~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~ 181 (245)
+|.|.|.|.+.+..| .....+.|.+. +.+|.+.. ......+..+.|.|.+.+..|...-..|++ +..
T Consensus 89 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~g~ 168 (223)
T 1dee_B 89 EDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVSCENSNPSSTVAVGCLAQDFLPDSITFSWKYKNNS 168 (223)
T ss_dssp GGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEECTTCCCSSSEEEEEEEEEEEBSSCCEEEEEETTSC
T ss_pred HHCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecCCcccCCCCcEEEEEEEEEEeCCCeEEEeEccCCC
Confidence 999999999998753 11122344443 23343321 122356789999999965422211223555 322
Q ss_pred CCCCeEEEeeCCCCCCCccee-eeEEEecCCCC--CceEEEEEEEEecCCCC
Q psy12131 182 ELTPWRNIVIPSDGSLAGPIY-TQSYNITGLQL--FTQYEASVLAKNRFGWS 230 (245)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~--~~~y~~~v~a~N~~G~~ 230 (245)
.-.. .. ....... ..... ...+.|..... .+...|.|.|.|..|..
T Consensus 169 ~l~~-~~-~~~~~~~-~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~ 217 (223)
T 1dee_B 169 DISS-TR-GFPSVLR-GGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGNK 217 (223)
T ss_dssp BCSC-EE-ECCCEEE-TTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCCE
T ss_pred ccce-eE-ECCcccc-CCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCCC
Confidence 1111 11 1110000 01111 23456655543 33445555599998754
No 462
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.36 E-value=1e-11 Score=88.61 Aligned_cols=110 Identities=15% Similarity=0.148 Sum_probs=72.5
Q ss_pred eEEecCCCeEEEEEEEeecC--CCeEEEEECC--EE---e--------------ccCCcEEEEec--CceeEEEEccCCC
Q psy12131 58 WIHTAPDMRAEIICNVYANP--PAKVEWFRDG--TA---I--------------TLGGRIDMHVS--SEKHSLLVRHIKD 114 (245)
Q Consensus 58 ~~~~~~g~~~~l~C~~~~~~--~~~~~w~~~~--~~---~--------------~~~~~~~~~~~--~~~~~l~i~~~~~ 114 (245)
...+.+|+.+.|.|.+.+.+ .+.+.|++.. .. + ....++.+... .....|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (225)
T 1op3_H 9 GGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMRV 88 (225)
T ss_dssp CEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCCCh
Confidence 45688999999999998876 6789999742 21 1 01245555432 3457899999999
Q ss_pred CCCeEEEEEEEeCCc-----e---eEEEEEEEecC---CCCcccc---CccccCCCeeEEEEEeCCC
Q psy12131 115 TDFGNYMCQASNNLG-----S---SQQFIQLSGIP---NIPVFQK---SSRRLGPDGYRLVWQVDTY 167 (245)
Q Consensus 115 ~d~g~y~C~~~n~~g-----~---~~~~~~~~~~~---~~p~~~~---~~~~~~~~~~~l~~~~~~~ 167 (245)
+|.|.|.|.+.+..| . ......|.+.. .+|.... ......++.+.|.|.+.+.
T Consensus 89 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~ 155 (225)
T 1op3_H 89 EDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSKSTSGGTAALGCLVKDY 155 (225)
T ss_dssp GGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCTTCCCCCEEEEEEEEEEE
T ss_pred hhCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccccccCCCcEEEEEEEEeE
Confidence 999999999999764 1 11223344332 2333221 1123568899999999654
No 463
>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.36 E-value=5.2e-12 Score=79.71 Aligned_cols=94 Identities=15% Similarity=0.174 Sum_probs=68.0
Q ss_pred CCCCccccCccccCCCeeEEEEEeC---CCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceE
Q psy12131 141 PNIPVFQKSSRRLGPDGYRLVWQVD---TYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQY 217 (245)
Q Consensus 141 ~~~p~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y 217 (245)
|.+|...... .....++.|.|.+. +..++.+|.|+|+... ...|..+..... ....+.+.+|.+++.|
T Consensus 9 P~~P~~l~~~-~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~-~~~w~~~~~~~~-------~~~~~~v~~L~p~t~Y 79 (111)
T 1x5y_A 9 TSAPQHLTVE-DVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEG-SEEWVPANKEPV-------ERCGFTVKDLPTGARI 79 (111)
T ss_dssp CCCCEEEEEE-EECSSEEEEEEECCSCCCSSCCCEEEEEEEETT-CCCCEESSSSCB-------SSSEEEEECCCTTCCE
T ss_pred CcCCCCCEEE-eccCCEEEEEECCCCcCCCCcccEEEEEEEECC-CCceEEccccCC-------cccEEEECCCCCCCEE
Confidence 4444433322 35678999999983 3346999999998865 567876543211 1278999999999999
Q ss_pred EEEEEEEecCCCCCCCcce-EEecCCC
Q psy12131 218 EASVLAKNRFGWSRPSKAY-VFATEGA 243 (245)
Q Consensus 218 ~~~v~a~N~~G~~~~s~~~-~~~t~~~ 243 (245)
.|||.|.|..|.|.+|... .+++.+.
T Consensus 80 ~frV~A~n~~G~s~~S~~~~~v~~~~~ 106 (111)
T 1x5y_A 80 LFRVVGVNIAGRSEPATLLQPVTIRES 106 (111)
T ss_dssp EEEEEEEETTEECCCCCCSSCBCCCCC
T ss_pred EEEEEEEcCCcCCCCccCCCCEEecCC
Confidence 9999999999999998865 4555443
No 464
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.36 E-value=1.9e-11 Score=84.10 Aligned_cols=149 Identities=13% Similarity=0.132 Sum_probs=88.5
Q ss_pred ceEEecCCCeEEEEEEEee-cCCCeEEEEEC-CEEec------------cC--CcEEEEecCceeEEEEccCCCCCCeEE
Q psy12131 57 QWIHTAPDMRAEIICNVYA-NPPAKVEWFRD-GTAIT------------LG--GRIDMHVSSEKHSLLVRHIKDTDFGNY 120 (245)
Q Consensus 57 ~~~~~~~g~~~~l~C~~~~-~~~~~~~w~~~-~~~~~------------~~--~~~~~~~~~~~~~l~i~~~~~~d~g~y 120 (245)
..+.+.+|+++.|.|...+ .+.+.+.|++. ...+. .. .++.+ ......|.|.+++.+|.|.|
T Consensus 7 ~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l--~~~~~sL~I~~v~~~D~G~Y 84 (180)
T 2dru_A 7 PNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDL--DKTNGALRIYNVSKEDRGDY 84 (180)
T ss_dssp CEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEE--CTTTCCEEECSCCGGGCEEE
T ss_pred ceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEE--eCCCccEEEcCCCHHHCeEE
Confidence 3466789999999999854 34679999984 32221 11 23333 12445799999999999999
Q ss_pred EEEEEeCCceeEEEEEEEecC--CCCccccCccccCCCeeEEEEEeCCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCC
Q psy12131 121 MCQASNNLGSSQQFIQLSGIP--NIPVFQKSSRRLGPDGYRLVWQVDTYSGIIQYLLKFREREELTPWRNIVIPSDGSLA 198 (245)
Q Consensus 121 ~C~~~n~~g~~~~~~~~~~~~--~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (245)
.|.+.+.. .....+.|.+.. ..|.+.. .+..+.|.|.+..+ |...+. |+++.. ... .. ..
T Consensus 85 ~C~v~~~~-~~~~~~~L~V~~~~~~P~i~~-----~~~~v~L~C~~~~g-p~p~i~-W~~~~~---~l~--~~--~~--- 146 (180)
T 2dru_A 85 YMRMLHET-EDQWKITMEVYEMVSKPMIYW-----ECSNATLTCEVLEG-TDVELK-LYQGKE---HLR--SL--RQ--- 146 (180)
T ss_dssp EEEEESSS-EEEEEEEEEEECCCCCCEEEE-----EGGGTEEEEECSSC-TTCEEE-EEETTE---EEE--EE--SS---
T ss_pred EEEEEcCC-eEEEEEEEEEECCCCCCEEEe-----cCCCEEEEEEeCCC-CCCEEE-EEECCe---ECc--CC--CC---
Confidence 99998876 455555665543 2333322 23569999999333 333333 454422 111 11 11
Q ss_pred cceeeeEEEecCCCCCceEEEEEEEEecCCCCCC
Q psy12131 199 GPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRP 232 (245)
Q Consensus 199 ~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~ 232 (245)
..+.+....+. ..|+|.|.|.+|....
T Consensus 147 -----~~l~~~~~~d~--g~Y~C~a~N~~~~~~~ 173 (180)
T 2dru_A 147 -----KTMSYQWTNLR--APFKCKAVNRVSQESE 173 (180)
T ss_dssp -----SEEEEECSCCS--SCEEEEEEETTEEEEE
T ss_pred -----CEEEEEEhhcC--ccEEEEEecCcCcccc
Confidence 33444333344 4455559999986543
No 465
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.36 E-value=8.6e-12 Score=78.57 Aligned_cols=94 Identities=17% Similarity=0.189 Sum_probs=68.7
Q ss_pred CCCCccccCccccCCCeeEEEEEeC---CCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceE
Q psy12131 141 PNIPVFQKSSRRLGPDGYRLVWQVD---TYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQY 217 (245)
Q Consensus 141 ~~~p~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y 217 (245)
|.+|...... .....++.|.|.+. +..++.+|.|+|+... ...|..+...... ...+.+.+|.+++.|
T Consensus 8 P~~P~~l~~~-~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~-~~~w~~~~~~~~~-------~~~~~v~~L~p~t~Y 78 (110)
T 2yuw_A 8 TSPPTLLTVD-SVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEG-TEDWIVANKDLID-------KTKFTITGLPTDAKI 78 (110)
T ss_dssp SCCCEEEEEE-EECSSCEEEEEECCSSCCSSCEEEEEEEEEETT-CSSEEECCSSCCC-------SSEEEECSCCTTCEE
T ss_pred CCCCCccEEE-eccCCeEEEEECCCCCCCCCCccEEEEEEEECC-CccceEeccccCc-------cCEEEECCCCCCCEE
Confidence 4455433322 35677999999983 3357899999999865 5678765432211 278999999999999
Q ss_pred EEEEEEEecCCCCCCCcce-EEecCCC
Q psy12131 218 EASVLAKNRFGWSRPSKAY-VFATEGA 243 (245)
Q Consensus 218 ~~~v~a~N~~G~~~~s~~~-~~~t~~~ 243 (245)
.|||.|.|..|.|.+|... .+++.+.
T Consensus 79 ~frV~A~n~~G~s~~S~~~~~v~~~~~ 105 (110)
T 2yuw_A 79 FVRVKAVNAAGASEPKYYSQPILVKES 105 (110)
T ss_dssp EEEEEEEETTEECCCEECSSCEECCCC
T ss_pred EEEEEEEcCCcCCCCcCCCCCEEecCC
Confidence 9999999999999998765 3444443
No 466
>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.36 E-value=1.2e-11 Score=79.18 Aligned_cols=95 Identities=18% Similarity=0.225 Sum_probs=71.6
Q ss_pred cCCCCccccCccccCCCeeEEEEEeCC---CCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCce
Q psy12131 140 IPNIPVFQKSSRRLGPDGYRLVWQVDT---YSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQ 216 (245)
Q Consensus 140 ~~~~p~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~ 216 (245)
.|.+|..... ......++.|.|.+.. ++++.+|.|+|+... ...|......... ...+.|.+|.+++.
T Consensus 17 ~P~~P~~l~~-~~~~~~sv~l~W~~p~~~~~g~i~~Y~v~~~~~~-~~~~~~~~~~~~~-------~~~~~i~~L~p~t~ 87 (120)
T 1x5f_A 17 LPSAPRDVVA-SLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEG-IARERVENTSHPG-------EMQVTIQNLMPATV 87 (120)
T ss_dssp CCCCCEEEEE-EEECSSCEEEEEECCSSCSSCCSSEEEEEEEETT-CCCCEEEECSSTT-------CSEEEECSCCTTCE
T ss_pred CCCCCCCcEE-EecCCCEEEEEECCCCCCCCCcEEEEEEEEEECC-CCCceEEEeccCC-------ccEEEeCCCCCCCE
Confidence 3444544333 2356778999999843 468899999998864 3445544332222 27899999999999
Q ss_pred EEEEEEEEecCCCCCCCcceEEecCCC
Q psy12131 217 YEASVLAKNRFGWSRPSKAYVFATEGA 243 (245)
Q Consensus 217 y~~~v~a~N~~G~~~~s~~~~~~t~~~ 243 (245)
|.|+|.|.|..|.|.+|..+.++|.++
T Consensus 88 Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 114 (120)
T 1x5f_A 88 YIFRVMAQNKHGSGESSAPLRVETQPE 114 (120)
T ss_dssp EEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEEEEEECCCccCCCCCCEEEEeCCC
Confidence 999999999999999999999999764
No 467
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=99.36 E-value=1.1e-09 Score=83.74 Aligned_cols=216 Identities=12% Similarity=0.020 Sum_probs=131.7
Q ss_pred cceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceEEe--cCCCeEEEEEEEeecC-CC--eEEEE
Q psy12131 10 RESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWIHT--APDMRAEIICNVYANP-PA--KVEWF 84 (245)
Q Consensus 10 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~--~~g~~~~l~C~~~~~~-~~--~~~w~ 84 (245)
...+.|.++.......|+..|.+..|... .....+...|. .+..+.+ .....+.|.+...... .. .+.|.
T Consensus 57 ~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~--~~~~~~~~~~~---~p~~l~~~~~~~~si~l~W~~p~~~~~~~Y~v~~~ 131 (368)
T 1fnf_A 57 QSSCTFDNLSPGLEYNVSVYTVKDDKESV--PISDTIIPAVP---PPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYS 131 (368)
T ss_dssp CCEEECCCCCTTSCEEEEEEEEETTEECC--CEEEEECCCCC---CCEEEEEESCCSSCEEEEEECCTTCCCSEEEEEEE
T ss_pred cCEEEECCCCCCCEEEEEEEEEcCCCccC--ceeeeecCCCc---CCceeEEEEcCCCeEEEEeeCCCCCCCcEEEEEEE
Confidence 34578889998888888999988876532 22223322111 1222222 2355666666643111 11 34444
Q ss_pred ECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEE-EEEEecCCCCccccCccccCCCeeEEEEE
Q psy12131 85 RDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQF-IQLSGIPNIPVFQKSSRRLGPDGYRLVWQ 163 (245)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~l~~~ 163 (245)
..+.. .....+........+.+.++.+.....|+..+.|..|..... ......+.+|..... .......+.|.|.
T Consensus 132 ~~~~~---~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~~~~~~P~~l~~-~~~~~~sv~l~W~ 207 (368)
T 1fnf_A 132 PVKNE---EDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLRGRQKTGLDSPTGIDF-SDITANSFTVHWI 207 (368)
T ss_dssp ETTCT---TCCEEEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCEEEEE-ESCCSSEEEEEEE
T ss_pred ECCCC---CccEEEEcCCCcceEEecCCCCCCEEEEEEEEEeCCCCCCCeEeeecCCCCCCCccEE-EEccCCEEEEEEe
Confidence 32110 112222233345678899999888888889999987754332 222233444443322 2346789999999
Q ss_pred eCCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcceEEecCCC
Q psy12131 164 VDTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKAYVFATEGA 243 (245)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~~~~~t~~~ 243 (245)
+.. +++.+|.+.++.......+......... ..+.+.+|.+++.|.|+|.|.|..|.+..+. ....+.+.
T Consensus 208 ~p~-~~i~~Y~v~~~~~~~~~~~~~~~~~~~~--------~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~~~-~~~~t~p~ 277 (368)
T 1fnf_A 208 APR-ATITGYRIRHHPEHFSGRPREDRVPHSR--------NSITLTNLTPGTEYVVSIVALNGREESPLLI-GQQSTVSD 277 (368)
T ss_dssp CCS-SCCSEEEEEEECSCCSSCCEEEEEETTC--------CEEEEESCCTTCEEEEEEEEEETTEECCCEE-EEEECCCC
T ss_pred CCC-CCcCEEEEEEecCCCCCCccEEEeCCCc--------CEEEECCCCCCCEEEEEEEEEeCCccCCccc-ccccCCCC
Confidence 854 5788999999886533445444443332 6789999999999999999999999987764 34455554
Q ss_pred C
Q psy12131 244 E 244 (245)
Q Consensus 244 ~ 244 (245)
+
T Consensus 278 ~ 278 (368)
T 1fnf_A 278 V 278 (368)
T ss_dssp S
T ss_pred C
Confidence 4
No 468
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.36 E-value=5.8e-12 Score=88.71 Aligned_cols=107 Identities=15% Similarity=0.288 Sum_probs=69.2
Q ss_pred ecCCCeEEEEEEEeecC---C-CeEEEEECCEEeccCCc-EE-EEecC---ceeEEEEccCCCCCCeEEEEEEEeCCcee
Q psy12131 61 TAPDMRAEIICNVYANP---P-AKVEWFRDGTAITLGGR-ID-MHVSS---EKHSLLVRHIKDTDFGNYMCQASNNLGSS 131 (245)
Q Consensus 61 ~~~g~~~~l~C~~~~~~---~-~~~~w~~~~~~~~~~~~-~~-~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~ 131 (245)
+..|+.+.|.|.+.+.+ . ..+.|++++..+..... .. ....+ ..+.|.|.++..+|.|.|.|.+.|..+..
T Consensus 15 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~~~~~ 94 (207)
T 2vol_A 15 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPA 94 (207)
T ss_dssp HSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEEEEECTTCSS
T ss_pred hccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEEEEccCCCC
Confidence 67999999999999884 2 48999999876542210 00 00000 13479999999999999999999987753
Q ss_pred --EEEEEEE-ecCCCCccccC---ccccCCCeeEEEEEeCCC
Q psy12131 132 --QQFIQLS-GIPNIPVFQKS---SRRLGPDGYRLVWQVDTY 167 (245)
Q Consensus 132 --~~~~~~~-~~~~~p~~~~~---~~~~~~~~~~l~~~~~~~ 167 (245)
...+.+. ....+|.+... .....+..+.|.|.+.+.
T Consensus 95 ~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~ 136 (207)
T 2vol_A 95 PIEKTISKTKGRPKAPQVYTLPPPKEQMAKDKVSLTCMITDF 136 (207)
T ss_dssp CEEEEECCCCCCCBCCEEEEECCCTGGGSSSEEEEEEEEEEE
T ss_pred ceEEEeccCCCCCcCCeEEEeCCCHHHhcCCceEEEEEEeeE
Confidence 2333221 12234433211 112357899999999653
No 469
>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.36 E-value=1.3e-11 Score=78.96 Aligned_cols=86 Identities=20% Similarity=0.161 Sum_probs=68.0
Q ss_pred ccCCCeeEEEEEeCCCCCceEEEEEEEeecC-CCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCC
Q psy12131 152 RLGPDGYRLVWQVDTYSGIIQYLLKFREREE-LTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWS 230 (245)
Q Consensus 152 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~ 230 (245)
.....++.|.|.+...+++.+|.|.|+.... ...|..+...... ..+.|.+|.+++.|.|+|.|.|..|.|
T Consensus 29 ~~~~~sv~l~W~~p~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~--------~~~~i~~L~p~t~Y~~~V~A~n~~G~g 100 (119)
T 2ee2_A 29 VLSSSEISVHWEHVLEKIVESYQIRYWAAHDKEEAANRVQVTSQE--------YSARLENLLPDTQYFIEVGACNSAGCG 100 (119)
T ss_dssp EEETTEEEEECCCCSCTTCCEEEEEEEESSSCGGGCEEEEEETTC--------SEEEECSCCTTCEEEEEEEEECSSSCC
T ss_pred EccCCEEEEEecCCCCCccceEEEEEEECCCcccCcEEEEcCCCE--------eEEEECCCCCCCEEEEEEEEEcCCccC
Confidence 4567899999998443789999999987652 2234444433322 689999999999999999999999999
Q ss_pred CCCcceEEecCCCCC
Q psy12131 231 RPSKAYVFATEGAET 245 (245)
Q Consensus 231 ~~s~~~~~~t~~~~~ 245 (245)
.+|..+.++|...+|
T Consensus 101 ~~S~~~~~~T~~~~p 115 (119)
T 2ee2_A 101 PPSDMIEAFTKKASG 115 (119)
T ss_dssp CCCCCEEEECCCCCC
T ss_pred CCCCCEEEECCCCCC
Confidence 999999999987654
No 470
>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1
Probab=99.35 E-value=1.1e-11 Score=78.60 Aligned_cols=98 Identities=16% Similarity=0.177 Sum_probs=63.1
Q ss_pred cCCCCccccCccccCCCeeEEEEEe--CCCCCceEEEEEEEeecCCCCeEEEeeCCCCC----CCcceeeeEEEecCCCC
Q psy12131 140 IPNIPVFQKSSRRLGPDGYRLVWQV--DTYSGIIQYLLKFREREELTPWRNIVIPSDGS----LAGPIYTQSYNITGLQL 213 (245)
Q Consensus 140 ~~~~p~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~l~~ 213 (245)
.|.+|. ......+++.|.|.+ +.+.++++|.|+|+.......|..+....... ..-......+.+.+|.+
T Consensus 5 pP~~P~----v~~~~~~sv~L~W~~P~~~G~pI~~Y~Ve~r~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p 80 (115)
T 2ic2_A 5 PPTPPN----VTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKP 80 (115)
T ss_dssp CCCCCE----EEECC---EEEEEEEECCSSCCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEEEEEEECSCCS
T ss_pred CCCcCE----eEEEeCCEEEEEEcCCCCCCCCCceEEEEEEECCCCCCceECcccccccccccccccCceeEEEeCCCCC
Confidence 455665 224677899999998 34478999999999863256787664321000 00112235789999999
Q ss_pred CceEEEEEEEEecCCCC---CCCcceEEecC
Q psy12131 214 FTQYEASVLAKNRFGWS---RPSKAYVFATE 241 (245)
Q Consensus 214 ~~~y~~~v~a~N~~G~~---~~s~~~~~~t~ 241 (245)
++.|.|||.|.|..|.+ ..|..+.+++.
T Consensus 81 ~t~Y~FRV~A~N~~G~~~pS~~S~~~~~~~~ 111 (115)
T 2ic2_A 81 QHTYRFRILAVYSNNDNKESNTSAKFYLQPG 111 (115)
T ss_dssp SEEEEEEEEEEETTSCEEECCCCCCEEECC-
T ss_pred CCEEEEEEEEEeCCCCCCCCCCCCCEEeCCC
Confidence 99999999999999974 55555655543
No 471
>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1
Probab=99.35 E-value=2.7e-12 Score=80.20 Aligned_cols=95 Identities=19% Similarity=0.226 Sum_probs=66.9
Q ss_pred CCCCccccCccccCCCeeEEEEEeC---CCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceE
Q psy12131 141 PNIPVFQKSSRRLGPDGYRLVWQVD---TYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQY 217 (245)
Q Consensus 141 ~~~p~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y 217 (245)
|.+|..... ...... +.|+|.++ ++.|+.+|.|+|+... ...|........ .......+.|.+|.+++.|
T Consensus 7 P~~P~~~~~-~~~~~~-v~l~W~~P~~~~G~pi~~Y~v~~~~~~-~~~~~~~~~~~~----~~~~~~~~~i~~L~p~t~Y 79 (105)
T 2haz_A 7 PSSPSIDQV-EPYSST-AQVQFDEPEATGGVPILKYKAEWRAVG-EEVWHSKWYDAK----EASMEGIVTIVGLKPETTY 79 (105)
T ss_dssp CCCCEEEEE-EECSSC-EEEEEECCSCCTTSCCCEEEEEEEETT-CCCCEEEEEEHH----HHHHHSEEEECSCCTTCEE
T ss_pred CcCCCCCEE-EEcCCc-EEEEEcCCcccCCccccEEEEEEEECC-CCCCccceEEcc----ccCCccEEEECCCCCCCEE
Confidence 444443332 223444 99999973 2345999999999875 445743211000 0001267999999999999
Q ss_pred EEEEEEEecCCCCCCCcceEEecCC
Q psy12131 218 EASVLAKNRFGWSRPSKAYVFATEG 242 (245)
Q Consensus 218 ~~~v~a~N~~G~~~~s~~~~~~t~~ 242 (245)
.|+|.|.|..|.|.+|....++|.+
T Consensus 80 ~~rV~A~n~~G~g~~S~~~~~~T~p 104 (105)
T 2haz_A 80 AVRLAALNGKGLGEISAASEFKTQP 104 (105)
T ss_dssp EEEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEEEEEcCCccCCCcCCEeeEEec
Confidence 9999999999999999999999976
No 472
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.35 E-value=1.4e-11 Score=75.88 Aligned_cols=79 Identities=22% Similarity=0.361 Sum_probs=62.1
Q ss_pred cceEEecCCCeEEEEEEEe-ecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEEE
Q psy12131 56 KQWIHTAPDMRAEIICNVY-ANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQF 134 (245)
Q Consensus 56 ~~~~~~~~g~~~~l~C~~~-~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~ 134 (245)
+....+.+|+.+.|.|.+. +.|.+.+.|++++........ ... ...|.|.++..+|.|.|.|.+.|..|.....
T Consensus 17 ~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~~~~--~~~---~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~ 91 (98)
T 1gl4_B 17 QRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPSRA--MDF---NGILTIRNVQPSDAGTYVCTGSNMFAMDQGT 91 (98)
T ss_dssp CCEEEECTTCCEEEEEEEEESSSCCEEEEEEGGGBCCCTTE--EEE---TTEEEECSCCGGGCEEEEEEEECSSCEEEEE
T ss_pred CCCeEEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCCCcee--ecC---CCEEEEeCCChhhCEEEEEEecCCCCccccE
Confidence 3456788999999999998 588899999997543332221 121 2379999999999999999999999988887
Q ss_pred EEEEe
Q psy12131 135 IQLSG 139 (245)
Q Consensus 135 ~~~~~ 139 (245)
+.|.+
T Consensus 92 ~~l~V 96 (98)
T 1gl4_B 92 ATLHV 96 (98)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77765
No 473
>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.35 E-value=6.2e-12 Score=80.30 Aligned_cols=97 Identities=20% Similarity=0.328 Sum_probs=72.4
Q ss_pred cCCCCccccCccccCCCeeEEEEEeCC-CCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEE
Q psy12131 140 IPNIPVFQKSSRRLGPDGYRLVWQVDT-YSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYE 218 (245)
Q Consensus 140 ~~~~p~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~ 218 (245)
.|.+|..... ......++.|.|.+.. ++++.+|.|+|+... ...|..+....... ..+.|.+|.+++.|.
T Consensus 17 ~P~~P~~l~~-~~~~~~sv~l~W~~p~~~g~i~~Y~v~~~~~~-~~~~~~~~~~~~~~-------~~~~i~~L~p~t~Y~ 87 (118)
T 2yrz_A 17 VPDTPTRLVF-SALGPTSLRVSWQEPRCERPLQGYSVEYQLLN-GGELHRLNIPNPAQ-------TSVVVEDLLPNHSYV 87 (118)
T ss_dssp CCCCCCCCEE-CCCBTTEEEEECCCCCCSSCEEEEEEEEEBSS-SCCEEEEEESCTTC-------CEEEEESCCTTCEEE
T ss_pred CCCCCCceEE-EeCCCCEEEEEeCCCCCCCCccEEEEEEEECC-CCceEEEEcCCCCc-------CEEEeCCCCCCCEEE
Confidence 3444444332 2356789999999833 358999999999865 45676665543322 789999999999999
Q ss_pred EEEEEEecCCCCCCCc-ceEEecCCCCC
Q psy12131 219 ASVLAKNRFGWSRPSK-AYVFATEGAET 245 (245)
Q Consensus 219 ~~v~a~N~~G~~~~s~-~~~~~t~~~~~ 245 (245)
|+|+|.|..|.|.+|. .+.+.+.+.+|
T Consensus 88 ~~V~A~n~~G~g~~S~~~~~~~t~~~~p 115 (118)
T 2yrz_A 88 FRVRAQSQEGWGREREGVITIESQVSGP 115 (118)
T ss_dssp EEEEEEESSCEEEEEEEEEECCCSCCCC
T ss_pred EEEEEEcCCcCCCCcCCceEeCCCCCCC
Confidence 9999999999999988 67777766554
No 474
>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.35 E-value=8.9e-12 Score=78.09 Aligned_cols=82 Identities=22% Similarity=0.238 Sum_probs=66.2
Q ss_pred cCCCeeEEEEEeC--CCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCC
Q psy12131 153 LGPDGYRLVWQVD--TYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWS 230 (245)
Q Consensus 153 ~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~ 230 (245)
...+++.|.|.+. .++++.+|.|+|+... ...|..+...... ..+.|.+|.+++.|.|+|.|.|..|.|
T Consensus 18 ~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~-~~~~~~~~~~~~~--------~~~~i~~L~p~t~Y~~~V~A~n~~G~g 88 (107)
T 2dn7_A 18 TAMNTALLQWHPPKELPGELLGYRLQYCRAD-EARPNTIDFGKDD--------QHFTVTGLHKGTTYIFRLAAKNRAGLG 88 (107)
T ss_dssp CSTTEEEEEEECCSSCSSCCCEEEEEEEETT-CSSCEEEEEETTC--------CEEEEECCCTTCEEEEEEEEEETTEEE
T ss_pred cCCCEEEEEECCCCCCCCceeEEEEEEEECC-CCCCEEEEeCCCc--------cEEEeCCCCCCCEEEEEEEEEcCCccc
Confidence 4778999999984 4568999999999765 5677766554433 689999999999999999999999999
Q ss_pred CCCcceEEecCCCC
Q psy12131 231 RPSKAYVFATEGAE 244 (245)
Q Consensus 231 ~~s~~~~~~t~~~~ 244 (245)
.+|. ..+.|...+
T Consensus 89 ~~s~-~~~~T~~~~ 101 (107)
T 2dn7_A 89 EEFE-KEIRTPEDL 101 (107)
T ss_dssp EEEE-EEEECCCCC
T ss_pred CCee-eEEeCCCCC
Confidence 9988 556666543
No 475
>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.35 E-value=2.1e-12 Score=82.35 Aligned_cols=97 Identities=21% Similarity=0.274 Sum_probs=72.4
Q ss_pred cCCCCccccCccccCCCeeEEEEEe--CCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceE
Q psy12131 140 IPNIPVFQKSSRRLGPDGYRLVWQV--DTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQY 217 (245)
Q Consensus 140 ~~~~p~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y 217 (245)
.|.+|...... .....++.|.|.+ +++.++.+|.|+|+.......|..+...... ..+.+.+|.+++.|
T Consensus 15 ~P~~P~~~~~~-~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~--------~~~~i~~L~p~t~Y 85 (117)
T 1uem_A 15 LPGPPSKPQVT-DVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANHVKT--------TLYTVRGLRPNTIY 85 (117)
T ss_dssp SCBCCCCCEEE-EECSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEEEEEECS--------SEEEECSCCTTCEE
T ss_pred CccCCCCCEEE-EecCCEEEEEEeCCCCCCcCceEEEEEEEECCCCCceeEcccccCc--------CEEEECCCCCCCEE
Confidence 44555433322 3567799999998 3456889999999875334567765432222 67999999999999
Q ss_pred EEEEEEEecCCCCCCCcceE-EecCCCCC
Q psy12131 218 EASVLAKNRFGWSRPSKAYV-FATEGAET 245 (245)
Q Consensus 218 ~~~v~a~N~~G~~~~s~~~~-~~t~~~~~ 245 (245)
.|+|+|.|..|.|.+|.... ++|.+.+|
T Consensus 86 ~frV~A~n~~G~s~~S~~~~~v~t~~~~P 114 (117)
T 1uem_A 86 LFMVRAINPQGLSDPSPMSDPVRTQDSGP 114 (117)
T ss_dssp EEEEEEEETTEEEEECCCCCCEECCCSSC
T ss_pred EEEEEEECCCccCCCcCCCccEEccCCCC
Confidence 99999999999999888776 88877654
No 476
>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.35 E-value=4.2e-12 Score=80.71 Aligned_cols=84 Identities=19% Similarity=0.234 Sum_probs=67.5
Q ss_pred ccCCCeeEEEEEeCCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCC
Q psy12131 152 RLGPDGYRLVWQVDTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSR 231 (245)
Q Consensus 152 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~ 231 (245)
.....++.|.|.+..++++.+|.|+|+... ...|....... ...+.|.+|.+++.|.|+|+|.|..|.|.
T Consensus 28 ~~~~~sv~l~W~~p~~~~i~~Y~v~~~~~~-~~~~~~~~~~~---------~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~ 97 (115)
T 1x5z_A 28 PESETSILLSWTPPRSDTIANYELVYKDGE-HGEEQRITIEP---------GTSYRLQGLKPNSLYYFRLAARSPQGLGA 97 (115)
T ss_dssp CSSSSEEEEEEECCSCCCCCEEEECBEESS-SCCCBCCEECS---------SSEEEEECCCTTCEEEECEEEECSSCEEE
T ss_pred eCCCCEEEEEEcCCCCCCccEEEEEEEeCC-CCCceEEecCC---------CcEEEECCCCCCCeEEEEEEEECCCcccC
Confidence 356789999999966668999999998865 34443222221 16799999999999999999999999999
Q ss_pred CCcceEEecCCCCC
Q psy12131 232 PSKAYVFATEGAET 245 (245)
Q Consensus 232 ~s~~~~~~t~~~~~ 245 (245)
+|..+.++|.+.+|
T Consensus 98 ~S~~~~~~T~~~~P 111 (115)
T 1x5z_A 98 STAEISARTMQSSG 111 (115)
T ss_dssp ECCCEEEECCCCCC
T ss_pred CCcCEEEecCCCCC
Confidence 99999999987754
No 477
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.34 E-value=8.7e-12 Score=95.85 Aligned_cols=119 Identities=10% Similarity=0.058 Sum_probs=82.9
Q ss_pred ceEEEeccCCCCCEEEEEEEEcCCCCc-eeeEEEE--EEecCCeEEeecceEEecCCCeEEEEEEEeecC--CCeEEEEE
Q psy12131 11 ESLDLDRVTLKLAGLYQCIASNNIGES-TSKNFIV--NVIYPPEVSVEKQWIHTAPDMRAEIICNVYANP--PAKVEWFR 85 (245)
Q Consensus 11 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~~l--~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~--~~~~~w~~ 85 (245)
+.|.|..++.+|.|.|+|.+.+..+.. ..+.+.+ .+..+|.+...+.......|+.+.|.|.+.|.. .+.+.|++
T Consensus 233 s~L~I~~~~~~D~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k 312 (376)
T 2aty_A 233 SELPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQW 312 (376)
T ss_pred EEEEechHhccCCCEEEEEEecCCCCCceEEEEcCCCCCCcCCeEEeeCCCHHHhcCCceEEEEEEEEeECCCcEEEEEE
Confidence 469999999999999999999876642 2333333 455688887766555555689999999999863 35899999
Q ss_pred CCEEeccCCcEEE--EecC---ceeEEEEccCCCCCCeEEEEEEEeCCc
Q psy12131 86 DGTAITLGGRIDM--HVSS---EKHSLLVRHIKDTDFGNYMCQASNNLG 129 (245)
Q Consensus 86 ~~~~~~~~~~~~~--~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g 129 (245)
++..+........ ..++ ..+.|.|......|.|.|+|.+.|..-
T Consensus 313 ~g~~~~~~~~~~~~~~~dgty~~~s~L~i~~~~~~~~~~YtC~v~h~~l 361 (376)
T 2aty_A 313 NGQPAENYKNTQPIMNTNESYFVYSKLNVQKSNWEAGNTFTCSVLHEGL 361 (376)
T ss_pred CCEECCCeEeCCceECCCCCEEEEEEEEEcHHHhCCCCcEEEEEEeCCC
Confidence 9987643221111 1111 124566776666678999999999753
No 478
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.34 E-value=1.6e-11 Score=87.79 Aligned_cols=170 Identities=12% Similarity=0.085 Sum_probs=93.9
Q ss_pred ceEEecCCCeEEEEEEEeecCC----CeEEEEEC--CEE---ec-------------cCCcEEEEec--CceeEEEEccC
Q psy12131 57 QWIHTAPDMRAEIICNVYANPP----AKVEWFRD--GTA---IT-------------LGGRIDMHVS--SEKHSLLVRHI 112 (245)
Q Consensus 57 ~~~~~~~g~~~~l~C~~~~~~~----~~~~w~~~--~~~---~~-------------~~~~~~~~~~--~~~~~l~i~~~ 112 (245)
..+.+.+|+.+.|.|.+.+.+. +.+.|++. +.. +. ...++.+... .....|.|.++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 87 (228)
T 3bae_H 8 GPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITSV 87 (228)
T ss_dssp CCSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECSC
T ss_pred CceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcCC
Confidence 3456889999999999998764 88999873 221 10 1235554432 23578999999
Q ss_pred CCCCCeEEEEEEEeCCc------e---eEEEEEEEecC---CCCccccC---ccccCCCeeEEEEEeCCC-CCceEEEEE
Q psy12131 113 KDTDFGNYMCQASNNLG------S---SQQFIQLSGIP---NIPVFQKS---SRRLGPDGYRLVWQVDTY-SGIIQYLLK 176 (245)
Q Consensus 113 ~~~d~g~y~C~~~n~~g------~---~~~~~~~~~~~---~~p~~~~~---~~~~~~~~~~l~~~~~~~-~~~~~~~~~ 176 (245)
+.+|.|.|.|.+.+..| . ......|.+.. .+|..... .....++.+.|.|.+.+. ++...+ .|
T Consensus 88 ~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~g~~P~p~~v-~W 166 (228)
T 3bae_H 88 DTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTL-TW 166 (228)
T ss_dssp CGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC-----CCSEEEEEEEEEEEBSSCCEE-EE
T ss_pred CcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEecccccccCCCCEEEEEEEccEeCCCEEE-EE
Confidence 99999999999998764 1 11223444432 23332211 123568899999999654 322122 24
Q ss_pred EEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCC
Q psy12131 177 FREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSR 231 (245)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~ 231 (245)
+++...............+ .......+.|......+ ..|.|.|.|..|...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~---~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~ 217 (228)
T 3bae_H 167 NSGSLSSGVHTFPAVLQSD---LYTLSSSVTVTSSTWPS-ESITCNVAHPASSTK 217 (228)
T ss_dssp GGGTCCTTEEEEEEEEETT---EEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEE
T ss_pred eeCCcccCceEcCceeCCC---cEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCC
Confidence 4332210000100000000 00112346666665433 555566999988643
No 479
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.34 E-value=1.9e-11 Score=83.59 Aligned_cols=113 Identities=14% Similarity=0.145 Sum_probs=79.6
Q ss_pred ceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEee-cceEEecCCCeEEEEEEEeec-CCC--eEEEEEC
Q psy12131 11 ESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVE-KQWIHTAPDMRAEIICNVYAN-PPA--KVEWFRD 86 (245)
Q Consensus 11 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~-~~~~~~~~g~~~~l~C~~~~~-~~~--~~~w~~~ 86 (245)
..|.|.+++. | |.|.|.+.... ....+.+.|.|..+|..... +....+.+|+.++|.|.+.+. |.. .+.|+++
T Consensus 50 ~~l~l~~vs~-~-g~y~C~~~c~~-~~~~~~~~l~V~~~P~~v~i~~~~~~~~~G~~~tL~C~v~g~~P~~~l~i~w~kg 126 (185)
T 1iam_A 50 KVYELSNVQE-D-SQPMCYSNCPD-GQSTAKTFLTVYWTPERVELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRG 126 (185)
T ss_dssp EEEEEEEECS-C-BCCEEEEECSS-CEEEEECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEET
T ss_pred eEEEEEecCc-C-CEEEEEEECCC-CceEEEEEEEEeCCCCCCEEccCCccccCCCcEEEEEEcCCccCCCCcEEEEEeC
Confidence 4599999984 4 99999986543 34788999999987765433 333347899999999999885 443 5899999
Q ss_pred CEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCc
Q psy12131 87 GTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLG 129 (245)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g 129 (245)
+..+.... ........++.+.....++...|+|.|.|..+
T Consensus 127 ~~~l~~~~---~~~~~~~~tl~~~~~reD~g~~~sC~A~~~l~ 166 (185)
T 1iam_A 127 EKELKREP---AVGEPAEVTTTVLVRRDHHGAQFSCRTELDLR 166 (185)
T ss_dssp TEEEEEEE---CCTTTEEEEEEEECCSSCSSCEEEEEEEEECG
T ss_pred CEEccccc---CCCccccEEEEEeceeccCCCeEEEEEEecCc
Confidence 98876421 00111233566665555455599999999876
No 480
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.34 E-value=3.7e-11 Score=87.97 Aligned_cols=130 Identities=15% Similarity=0.080 Sum_probs=78.6
Q ss_pred CeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEE--CCEE------------eccC----CcEEEEe-cCceeEEEEc
Q psy12131 50 PEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFR--DGTA------------ITLG----GRIDMHV-SSEKHSLLVR 110 (245)
Q Consensus 50 p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~--~~~~------------~~~~----~~~~~~~-~~~~~~l~i~ 110 (245)
+.+...+..+.+.+|+.+.|.|.+. .+.+.+.|++ .+.. .... .++.+.. ......|.|.
T Consensus 27 ~~v~~~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~ 105 (268)
T 3pl6_D 27 AGVSQTPSNKVTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQ 105 (268)
T ss_dssp SSCBCCCSEEEEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEEC
T ss_pred ceeEeCCCEEEecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEEC
Confidence 4445556677889999999999986 5778999998 2211 1111 4555443 2335789999
Q ss_pred cCCCCCCeEEEEEEEeC--CceeEEEEEEEecC-----CCCccccC----ccccCCCeeEEEEEeCCCCCceEEEEEEEe
Q psy12131 111 HIKDTDFGNYMCQASNN--LGSSQQFIQLSGIP-----NIPVFQKS----SRRLGPDGYRLVWQVDTYSGIIQYLLKFRE 179 (245)
Q Consensus 111 ~~~~~d~g~y~C~~~n~--~g~~~~~~~~~~~~-----~~p~~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 179 (245)
+++.+|.|.|.|.+.+. .........+.+.. .+|..... .....++.+.|.|.+.+..|...-..|+++
T Consensus 106 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~~~ 185 (268)
T 3pl6_D 106 RTERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVN 185 (268)
T ss_dssp SCCGGGCEEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEES
T ss_pred CCCcccCEEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCCCeEEEEEEC
Confidence 99999999999999974 22222222333322 23332211 112347899999999664332212235554
Q ss_pred e
Q psy12131 180 R 180 (245)
Q Consensus 180 ~ 180 (245)
.
T Consensus 186 g 186 (268)
T 3pl6_D 186 G 186 (268)
T ss_dssp S
T ss_pred C
Confidence 3
No 481
>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.34 E-value=1.1e-11 Score=78.27 Aligned_cols=94 Identities=26% Similarity=0.380 Sum_probs=70.3
Q ss_pred cCCCCccccCccccCCCeeEEEEEeC--CCCCceEEEEEEEeec-CCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCce
Q psy12131 140 IPNIPVFQKSSRRLGPDGYRLVWQVD--TYSGIIQYLLKFRERE-ELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQ 216 (245)
Q Consensus 140 ~~~~p~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~ 216 (245)
.|.+|...... .....++.|.|.+. .++++.+|.|+|+... ....|..+.. . ...+.+.+|.+++.
T Consensus 10 ~P~~P~~l~~~-~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~--~--------~~~~~i~~L~p~t~ 78 (111)
T 1x5l_A 10 APSQVVVIRQE-RAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYSTLKA--V--------TTRATVSGLKPGTR 78 (111)
T ss_dssp CCCCCCCEECS-CBCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSSCEEEEE--S--------SSEEEECSCCTTCE
T ss_pred CCCCCceEEEE-EcCCCEEEEEECCCCCCCCEEEEEEEEEEECCCCceeEEEecC--C--------CCEEEEcCCCCCCE
Confidence 34444433332 36678999999983 3567899999998865 2233433322 1 26799999999999
Q ss_pred EEEEEEEEecCCCCCCCcceEEecCCCC
Q psy12131 217 YEASVLAKNRFGWSRPSKAYVFATEGAE 244 (245)
Q Consensus 217 y~~~v~a~N~~G~~~~s~~~~~~t~~~~ 244 (245)
|.|+|+|.|..|.|.+|..+.++|.+.+
T Consensus 79 Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 106 (111)
T 1x5l_A 79 YVFQVRARTSAGCGRFSQAMEVETGKPS 106 (111)
T ss_dssp EEECEEEEETTEECCCCCCEEEECCCTT
T ss_pred EEEEEEEEeCCcCCCCcccEEEEcCCCC
Confidence 9999999999999999999999998764
No 482
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.34 E-value=2.6e-11 Score=87.35 Aligned_cols=114 Identities=13% Similarity=0.137 Sum_probs=72.1
Q ss_pred EEeecceEEecCCCeEEEEEEEeecCCCeEEEEE--------------CCEEec---cCCcEEEEe-cCceeEEEEccCC
Q psy12131 52 VSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFR--------------DGTAIT---LGGRIDMHV-SSEKHSLLVRHIK 113 (245)
Q Consensus 52 ~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~--------------~~~~~~---~~~~~~~~~-~~~~~~l~i~~~~ 113 (245)
+...+..+.+.+|+.+.|.|.+.+ +.+.+.|++ ++.... ...++.+.. ......|.|.+++
T Consensus 5 v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~ 83 (240)
T 3q5y_A 5 VVQSPRHIIKEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSALE 83 (240)
T ss_dssp CEEECSEEEEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSCC
T ss_pred cccCcceeeecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcCC
Confidence 445566778899999999999875 778999998 111111 123555443 3346689999999
Q ss_pred CCCCeEEEEEEEeC---CceeEE--EEEEEe---cCCCCccccC----ccccCCCeeEEEEEeCC
Q psy12131 114 DTDFGNYMCQASNN---LGSSQQ--FIQLSG---IPNIPVFQKS----SRRLGPDGYRLVWQVDT 166 (245)
Q Consensus 114 ~~d~g~y~C~~~n~---~g~~~~--~~~~~~---~~~~p~~~~~----~~~~~~~~~~l~~~~~~ 166 (245)
.+|.|.|.|.+.+. ...... .+.+.. .+.+|..... .....+..+.|.|.+.+
T Consensus 84 ~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g 148 (240)
T 3q5y_A 84 LEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARG 148 (240)
T ss_dssp GGGCEEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEE
T ss_pred hhHCEEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEee
Confidence 99999999999832 111222 333332 1233433211 11234689999999965
No 483
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.34 E-value=4.9e-13 Score=94.72 Aligned_cols=117 Identities=12% Similarity=0.140 Sum_probs=76.4
Q ss_pred ceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEE---EEecCCeEEeecc-eEEecCCCeEEEEEEEeec-CC-CeEEEE
Q psy12131 11 ESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIV---NVIYPPEVSVEKQ-WIHTAPDMRAEIICNVYAN-PP-AKVEWF 84 (245)
Q Consensus 11 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l---~v~~~p~~~~~~~-~~~~~~g~~~~l~C~~~~~-~~-~~~~w~ 84 (245)
+.|.|.+++.+|+|.|+|.+.+..+.. .....+ .+..+|.+...+. ...+..|+.+.|.|.+.|. |. +.+.|+
T Consensus 66 ~~L~I~~~~~~D~g~Y~C~~~~~~~~~-~~~~~i~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~ 144 (214)
T 1ow0_A 66 SVLPGCAEPWNHGKTFTCTAAYPESKT-PLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWL 144 (214)
T ss_dssp EECTTTHHHHHHTCEEEEEECCSSCSS-CEEEEEECCSSCCCCEEEEECCCTTTTTSSSEEEEEEEEEEESSSCCEEEEE
T ss_pred EEEEEeHHHcCCCCeEEEEEecCCCCC-ceeEeeccCCCCCCCEEEecCCCHHHhccCCceEEEEEEeeeECCCcEEEEE
Confidence 458899999999999999999876542 222233 2346777655432 2235678999999999985 43 499999
Q ss_pred ECCEEeccCCcEE---EEe---cCc----eeEEEEccCCCCCCeEEEEEEEeCC
Q psy12131 85 RDGTAITLGGRID---MHV---SSE----KHSLLVRHIKDTDFGNYMCQASNNL 128 (245)
Q Consensus 85 ~~~~~~~~~~~~~---~~~---~~~----~~~l~i~~~~~~d~g~y~C~~~n~~ 128 (245)
+++..+....... ... .+. .+.|.+......+.|.|+|.+.|..
T Consensus 145 k~g~~l~~~~~~~~~~~~~~~~~dgt~~~~s~l~v~~~~~~~~~~ytC~v~n~~ 198 (214)
T 1ow0_A 145 QGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEA 198 (214)
T ss_dssp ETTEECCGGGSEECCCEECSCSSSCCEEEEEEEEEEHHHHHHTCCEEEEEECTT
T ss_pred ECCEECCCCceeecCCcccccCCCCcEEEEEEEEECHHHccCCCEEEEEEECCC
Confidence 9998876542111 111 111 1233444333345789999999975
No 484
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=99.33 E-value=8.9e-10 Score=77.21 Aligned_cols=124 Identities=17% Similarity=0.160 Sum_probs=89.7
Q ss_pred CceeEEEEccCCCCCCeEEEEEEEeCCceeEE-EEEEEecCCCCccccCccccCCCeeEEEEEeCCCCCceEEEEEEEee
Q psy12131 102 SEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQ-FIQLSGIPNIPVFQKSSRRLGPDGYRLVWQVDTYSGIIQYLLKFRER 180 (245)
Q Consensus 102 ~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 180 (245)
.....+.+.++.+.....++..+.|..|.... .+.....+.+|..... ......++.|.|.+..++++.+|.+.|+..
T Consensus 74 ~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~t~~~~p~P~~l~~-~~~~~~sv~l~W~~p~~~~i~~Y~v~~~~~ 152 (203)
T 2gee_A 74 SSVGYYTVTGLEPGIDYDISVYTVKNGGESTPTTLTQQTAVPPPTDLRF-TNIGPDTMRVTWAPPPSIDLTNFLVRYSPV 152 (203)
T ss_dssp TTCCEEEECSCCTTCEEEEEEEEESSSCBCCCEEEEEECCCCCCEEEEE-EEEETTEEEEEEECCSSCCCSEEEEEEEET
T ss_pred CCccEEEeCCCCCCCEEEEEEEEEeCCCccccEeeeecCCCcCCCceEE-EEcCCCEEEEEEcCCCCCCccEEEEEEEEC
Confidence 34557889999998888889999987765433 2222222233433332 235678999999997667899999999985
Q ss_pred cCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCc
Q psy12131 181 EELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSK 234 (245)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~ 234 (245)
.....|......... ..+.+.+|.+++.|.|+|.|.|..|.|.++.
T Consensus 153 ~~~~~~~~~~~~~~~--------~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~~ 198 (203)
T 2gee_A 153 KNEEDVAELSISPSD--------NAVVLTNLLPGTEYVVSVSSVYEQHESTPLR 198 (203)
T ss_dssp TCGGGCEEEEECTTC--------CEEEECSCCTTCEEEEEEEEEETTEECCCEE
T ss_pred CCCCccEEEEcCCCc--------CEEEECCCCCCCEEEEEEEEecCCCcCCCee
Confidence 433445555444333 7899999999999999999999999998753
No 485
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=99.33 E-value=1.3e-10 Score=83.36 Aligned_cols=135 Identities=16% Similarity=0.179 Sum_probs=95.3
Q ss_pred ceeEEEEccCCCCCCeEEEEEEEeCCceeEE--EEEEEe---cCCCCccccCccccCCCeeEEEEEeC--CCCCceEEEE
Q psy12131 103 EKHSLLVRHIKDTDFGNYMCQASNNLGSSQQ--FIQLSG---IPNIPVFQKSSRRLGPDGYRLVWQVD--TYSGIIQYLL 175 (245)
Q Consensus 103 ~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~--~~~~~~---~~~~p~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~ 175 (245)
....+.|.++.+.....++..+.|..|.... .+.+.. .|.+|.... .......++.|.|.+. .++++.+|.+
T Consensus 56 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~~T~~~~P~~P~~l~-~~~~~~~sv~l~W~~p~~~~g~i~~Y~v 134 (234)
T 3f7q_A 56 KVPSVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPSEPGRLA-FNVVSSTVTQLSWAEPAETNGEITAYEV 134 (234)
T ss_dssp SSSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCCCCCCCCCCE-EEECSSSCEEEECCCCSCCSSCCCEEEE
T ss_pred CccEEEECCCCCCCEEEEEEEEEeCCCcCCCCCeEEEEcCCCCCCCCCccE-EEEecCCEEEEEEcCCCCCCCceeEEEE
Confidence 3457889999998888889999998775433 233332 233333322 2235677899999983 3568999999
Q ss_pred EEEeecCC----CCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCc-ceEEecCCCCC
Q psy12131 176 KFREREEL----TPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSK-AYVFATEGAET 245 (245)
Q Consensus 176 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~-~~~~~t~~~~~ 245 (245)
.|+..... ..|..+...... ...+.+.+|.+++.|.|+|.|.|..|.|.+|. .+.++|.+.+|
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~T~~~~P 202 (234)
T 3f7q_A 135 CYGLVNDDNRPIGPMKKVLVDNPK-------NRMLLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQPKRP 202 (234)
T ss_dssp EEEEBCTTSCBSSCCEECCCSCTT-------CCEEEEECCCTTCCEEEEEEEEETTEECCCEEEEECGGGSCCCC
T ss_pred EEEECCCCCCccCcceEEEecCCc-------ceEEEeCCCCCCCeEEEEEEEECCCccCCCcCceeEeecCCCCC
Confidence 99986511 224433332222 26899999999999999999999999999987 58888877643
No 486
>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.33 E-value=4.4e-12 Score=79.68 Aligned_cols=94 Identities=20% Similarity=0.271 Sum_probs=69.3
Q ss_pred CCCCccccCccccCCCeeEEEEEeC--CCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEE
Q psy12131 141 PNIPVFQKSSRRLGPDGYRLVWQVD--TYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYE 218 (245)
Q Consensus 141 ~~~p~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~ 218 (245)
|.+|..... ......++.|.|.++ .++++.+|.|.|+... ...|........ ...+.|.+|.+++.|.
T Consensus 8 P~~P~~l~~-~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~-~~~~~~~~~~~~--------~~~~~l~~L~p~t~Y~ 77 (108)
T 2djs_A 8 PSTVPIMHQ-VSATMRSITLSWPQPEQPNGIILDYEIRYYEKE-HNEFNSSMARSQ--------TNTARIDGLRPGMVYV 77 (108)
T ss_dssp CCCCSCCEE-EEECSSEEEEECCCCSCCSSCEEEEEEEEEETT-SCSTTCEEEEES--------SSEEEEESCCTTCEEE
T ss_pred CCCCcceEE-EecCCCEEEEEECCCCCCCCeEEEEEEEEEECC-CCCcceeEEecC--------ccEEEEcCCCCCCEEE
Confidence 444443322 235678999999983 4467899999998865 222322222111 2679999999999999
Q ss_pred EEEEEEecCCCCCCCcceEEecCCCC
Q psy12131 219 ASVLAKNRFGWSRPSKAYVFATEGAE 244 (245)
Q Consensus 219 ~~v~a~N~~G~~~~s~~~~~~t~~~~ 244 (245)
|+|+|.|..|.|.+|..+.++|.+..
T Consensus 78 ~~V~A~n~~G~g~~S~~~~~~T~~~~ 103 (108)
T 2djs_A 78 VQVRARTVAGYGKFSGKMCFQTLTDS 103 (108)
T ss_dssp EEEEEEESSCEEEECCCEEEECCCSS
T ss_pred EEEEEEeCCEECCCCCCEEEEeCCCC
Confidence 99999999999999999999998763
No 487
>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.33 E-value=3.5e-12 Score=81.85 Aligned_cols=98 Identities=21% Similarity=0.344 Sum_probs=73.1
Q ss_pred ecCCCCcccc-CccccCCCeeEEEEEe--CCCCCceEEEEEEEeecCCCCeEEEe-eCCCCCCCcceeeeEEEecCCCCC
Q psy12131 139 GIPNIPVFQK-SSRRLGPDGYRLVWQV--DTYSGIIQYLLKFREREELTPWRNIV-IPSDGSLAGPIYTQSYNITGLQLF 214 (245)
Q Consensus 139 ~~~~~p~~~~-~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~l~~~ 214 (245)
..|.+|.... ........++.|.|.+ +++.++..|.++|+.. ...|..+. ..... ...+.+.+|.++
T Consensus 16 ~~P~~P~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~--~~~~~~~~~~~~~~-------~~~~~v~~L~p~ 86 (121)
T 1wf5_A 16 QLPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSEN--NAPWTVLLASVDPK-------ATSVTVKGLVPA 86 (121)
T ss_dssp CCCCCCSSCEEEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECT--TCCCEEEESSCCTT-------CCEEEEESCCTT
T ss_pred eCCccCCCcceeeEeccCCEEEEEEcCCCCCCCcceEEEEEEEcC--CCCceEeEcccCCC-------ccEEEECCcCCC
Confidence 3456665541 1223567799999998 3456899999999885 37787662 21111 267999999999
Q ss_pred ceEEEEEEEEecCCCCCCCcce-EEecCCCCC
Q psy12131 215 TQYEASVLAKNRFGWSRPSKAY-VFATEGAET 245 (245)
Q Consensus 215 ~~y~~~v~a~N~~G~~~~s~~~-~~~t~~~~~ 245 (245)
+.|.|||.|.|..|.|.+|... .++|.+.+|
T Consensus 87 t~Y~frV~A~n~~G~s~~S~~~~~~~t~~~~P 118 (121)
T 1wf5_A 87 RSYQFRLCAVNDVGKGQFSKDTERVSLPESGP 118 (121)
T ss_dssp CEEEEEEEEEESSCEEEECCCCSCEECCCCSS
T ss_pred CEEEEEEEEEcCCccCCCcCCcceeEcCCCCC
Confidence 9999999999999999999886 588887654
No 488
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.33 E-value=5.5e-11 Score=85.22 Aligned_cols=177 Identities=14% Similarity=0.127 Sum_probs=93.3
Q ss_pred eEEecCCCeEEEEEEEeecC--CCeEEEEECC--E---Eec-------------cCCcEEEEe--cCceeEEEEccCCCC
Q psy12131 58 WIHTAPDMRAEIICNVYANP--PAKVEWFRDG--T---AIT-------------LGGRIDMHV--SSEKHSLLVRHIKDT 115 (245)
Q Consensus 58 ~~~~~~g~~~~l~C~~~~~~--~~~~~w~~~~--~---~~~-------------~~~~~~~~~--~~~~~~l~i~~~~~~ 115 (245)
.+.+.+|+.+.|.|.+.+.+ .+.+.|++.. . .+. ...++.+.. .+....|.|.+++.+
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 88 (232)
T 1dn0_B 9 AGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAA 88 (232)
T ss_dssp CCEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred CEEEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCCcc
Confidence 45678999999999998765 5689999732 1 110 124555543 234568999999999
Q ss_pred CCeEEEEEEE--eCCc----eeEEEEEEEecC---CCCcccc---CccccCC-CeeEEEEEeCCCCCceEEEEEEE-eec
Q psy12131 116 DFGNYMCQAS--NNLG----SSQQFIQLSGIP---NIPVFQK---SSRRLGP-DGYRLVWQVDTYSGIIQYLLKFR-ERE 181 (245)
Q Consensus 116 d~g~y~C~~~--n~~g----~~~~~~~~~~~~---~~p~~~~---~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~-~~~ 181 (245)
|.|.|.|.+. +..+ .......|.+.. .+|.... ......+ +.+.|.|.+.+..|......|++ +..
T Consensus 89 D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~~~~g~~~v~L~C~~~g~~P~p~~v~W~~~~g~ 168 (232)
T 1dn0_B 89 DTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVSCENSPSDTSSVAVGCLAQDFLPDSITFSWKYKNNS 168 (232)
T ss_dssp GCEEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEECC------CCSEEEEEEEEEEBSSCCEEEEEETTSC
T ss_pred cCEEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEeccccccCCCCCcEEEEEEEEEEeCCCeEEEEEcCCCC
Confidence 9999999998 4211 111223444432 2343321 1122356 88999999965422211223555 322
Q ss_pred CCCCeEEEeeCCCCCCCccee-eeEEEecCCCC--CceEEEEEEEEecCCCCCCCcceE
Q psy12131 182 ELTPWRNIVIPSDGSLAGPIY-TQSYNITGLQL--FTQYEASVLAKNRFGWSRPSKAYV 237 (245)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~--~~~y~~~v~a~N~~G~~~~s~~~~ 237 (245)
.-.. .. ....... ..... ...+.|..... .+...|.|.|.|..|.......+.
T Consensus 169 ~l~~-~~-~~~~~~~-~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~~~~~~i~ 224 (232)
T 1dn0_B 169 DISS-TR-GFPSVLR-GGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGNKEKNVPLP 224 (232)
T ss_dssp EECC-EE-ECCCEEE-TTEEEEEEEEEECTTCC---CCCEEEEEEECTTCCEEEEEECC
T ss_pred ceee-EE-ECCcccc-CCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCCcceeEecC
Confidence 0000 00 0000000 01111 23566766654 334555666999988654443333
No 489
>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C
Probab=99.33 E-value=2.9e-11 Score=74.94 Aligned_cols=82 Identities=20% Similarity=0.199 Sum_probs=65.8
Q ss_pred ccCCCeeEEEEEeC----CCCCceEEEEEEEeecCC--CCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEe
Q psy12131 152 RLGPDGYRLVWQVD----TYSGIIQYLLKFREREEL--TPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKN 225 (245)
Q Consensus 152 ~~~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N 225 (245)
.....++.|+|.+. .++.+.+|.|.|+..... ..|....+.... ..+.|.+|.+++.|.|+|.|.|
T Consensus 15 ~~s~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~~~~v~~~~--------~~~~l~~L~p~t~Y~v~V~A~n 86 (102)
T 3n1f_C 15 AVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGSK--------QWHMIGHLQPETSYDIKMQCFN 86 (102)
T ss_dssp ECSSSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGGCEEEEEETTC--------SEEEECSCCTTCEEEEEEEEEE
T ss_pred EcCCCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCceEEEEEcCCc--------eEEECCCCCCCCEEEEEEEEEC
Confidence 46678999999983 467899999999986522 357655554432 5689999999999999999999
Q ss_pred cCCCCCCCcceEEecC
Q psy12131 226 RFGWSRPSKAYVFATE 241 (245)
Q Consensus 226 ~~G~~~~s~~~~~~t~ 241 (245)
..|.|..|..+.++|.
T Consensus 87 ~~G~G~~S~~~~~~T~ 102 (102)
T 3n1f_C 87 EGGESEFSNVMICETK 102 (102)
T ss_dssp TTEECCCCCCEEEECC
T ss_pred CCcCCCCCCCEEeecC
Confidence 9999999999999874
No 490
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=99.33 E-value=1.1e-11 Score=82.10 Aligned_cols=87 Identities=13% Similarity=0.185 Sum_probs=65.6
Q ss_pred EEeecceEEecCCCeEEEEEEEeecCCCeEEEEE---------CCEEeccCCcEEEE-ecCceeEEEEccCCCCCCeEEE
Q psy12131 52 VSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFR---------DGTAITLGGRIDMH-VSSEKHSLLVRHIKDTDFGNYM 121 (245)
Q Consensus 52 ~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~---------~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~d~g~y~ 121 (245)
+...+..+.+..|+.+.|.|.+.+.+.+.+.|++ ++..+ ...++.+. .......|.|.++..+|.|.|.
T Consensus 41 ~~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~~~~~~~i~~~~~~~~-~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~ 119 (145)
T 1z9m_A 41 SQPWTSDETVVAGGTVVLKCQVKDHEDSSLQWSNPAQQTLYFGEKRAL-RDNRIQLVTSTPHELSISISNVALADEGEYT 119 (145)
T ss_dssp TCCBCCCEEEETTSCEEEEEECSCCTTCCEEEECTTCCEEEETTEECS-CCTTEEEEEECSSEEEEEECSCCGGGCEEEE
T ss_pred eecCCceEEEEcCCCEEEEEEEcCCCCcEEEEECCCCcEEEECCceec-ccCCEEEecCCCCeEEEEECCCChhhCEEEE
Confidence 3445667888999999999999998889999994 33222 23444432 2334678999999999999999
Q ss_pred EEEEeCCceeEEEEEEEec
Q psy12131 122 CQASNNLGSSQQFIQLSGI 140 (245)
Q Consensus 122 C~~~n~~g~~~~~~~~~~~ 140 (245)
|.+.|. |.....+.|.+.
T Consensus 120 C~~~n~-~~~~~~~~L~V~ 137 (145)
T 1z9m_A 120 CSIFTM-PVRTAKSLVTVL 137 (145)
T ss_dssp EEECSS-SCEEEEEEEEEE
T ss_pred EEEEcC-CCceEEEEEEEE
Confidence 999998 777666666654
No 491
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.32 E-value=5.5e-12 Score=82.80 Aligned_cols=86 Identities=16% Similarity=0.293 Sum_probs=66.5
Q ss_pred EecCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccC----------CcEEEE---ecCceeEEEEccC
Q psy12131 46 VIYPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLG----------GRIDMH---VSSEKHSLLVRHI 112 (245)
Q Consensus 46 v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~----------~~~~~~---~~~~~~~l~i~~~ 112 (245)
...+|.+...+....+..|+.+.|.|.+.|.|.|.+.|++++..+... .++.+. .......|.|.++
T Consensus 18 ~~~pP~~~~~p~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v 97 (137)
T 3qr2_A 18 GSHMAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTL 97 (137)
T ss_dssp ---CCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEEEESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEEECSC
T ss_pred CCCCCeEEcCCCCEEEeCCCCEEEEEEEeeecCCeEEEEECCCCccccceeecccCcccceEEecccccccceEEEECCC
Confidence 346899988888888999999999999999999999999976544321 122221 1123568999999
Q ss_pred CCCCCeEEEEEEEeCCcee
Q psy12131 113 KDTDFGNYMCQASNNLGSS 131 (245)
Q Consensus 113 ~~~d~g~y~C~~~n~~g~~ 131 (245)
..+|.|.|.|.+.|..|..
T Consensus 98 ~~~D~G~Y~C~a~N~~G~~ 116 (137)
T 3qr2_A 98 VEEDTGTYECRASNDPDRN 116 (137)
T ss_dssp CGGGCEEEEEEEECCTTSS
T ss_pred CcccCEEEEEEEEecCCcc
Confidence 9999999999999998865
No 492
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=99.32 E-value=4.4e-10 Score=92.88 Aligned_cols=133 Identities=17% Similarity=0.203 Sum_probs=94.3
Q ss_pred ceeEEEEccCCCCCCeEEEEEEEeCCce---eEE--EEEEE---ecCCCCccccCcccc--CCC---eeEEEEEe--CCC
Q psy12131 103 EKHSLLVRHIKDTDFGNYMCQASNNLGS---SQQ--FIQLS---GIPNIPVFQKSSRRL--GPD---GYRLVWQV--DTY 167 (245)
Q Consensus 103 ~~~~l~i~~~~~~d~g~y~C~~~n~~g~---~~~--~~~~~---~~~~~p~~~~~~~~~--~~~---~~~l~~~~--~~~ 167 (245)
....+.|.++.+...+.|++.|.|..|. ... .+... ..|.+|...... .. ..+ ++.|.|.+ ..+
T Consensus 221 ~~~~~~i~~L~P~t~Y~frV~A~n~~G~~~~ss~s~~~~t~~~~~pp~~P~~l~~~-~~~~~~~g~~sv~l~W~pP~~~~ 299 (680)
T 1zlg_A 221 TDERVQLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSSKDPSAPPAPANLRLA-NSTVNSDGSVTVTIVWDLPEEPD 299 (680)
T ss_pred CCCeEEeCCCCCCCEEEEEEEEEeCCCCCCCCCCccceEcCCCCCCCCCCCceEee-eeeecCCCceEEEEEecCCCCCC
Confidence 3456889999998899999999998772 111 22221 123344433332 23 456 99999997 356
Q ss_pred CCceEEEEEEEee-c-----CCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCcc---eEE
Q psy12131 168 SGIIQYLLKFRER-E-----ELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSKA---YVF 238 (245)
Q Consensus 168 ~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~~---~~~ 238 (245)
+++.+|.|.|+.. . ....|......... ..+.+.+|.+++.|.|+|.|.|..|.|.+|.. +.+
T Consensus 300 g~i~~Y~V~~~~~~~~~~~~~~~~~~~~~v~~~~--------~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~v~~ 371 (680)
T 1zlg_A 300 IPVHHYKVFWSWMVSSKSLVPTKKKRRKTTDGFQ--------NSVILEKLQPDCDYVVELQAITYWGQTRLKSAKVSLHF 371 (680)
T ss_pred CceeEEEEEEEecccccccCCccceEEEEEcCCe--------eEEEeCCCCCCCEEEEEEEEEECCCcCCCCCCceeEEE
Confidence 7899999999832 1 12357665554332 68999999999999999999999999998877 888
Q ss_pred ecCCCC
Q psy12131 239 ATEGAE 244 (245)
Q Consensus 239 ~t~~~~ 244 (245)
+|..++
T Consensus 372 ~T~~~~ 377 (680)
T 1zlg_A 372 TSTHAT 377 (680)
T ss_pred ECCCCC
Confidence 887654
No 493
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.32 E-value=1.2e-11 Score=100.40 Aligned_cols=170 Identities=14% Similarity=0.044 Sum_probs=97.4
Q ss_pred eEEecCCCeEEEEEEE-eecCCCeEEEEECCEEecc------------CCcEEEEecCceeEEEEccCCCCCCeEEEEEE
Q psy12131 58 WIHTAPDMRAEIICNV-YANPPAKVEWFRDGTAITL------------GGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQA 124 (245)
Q Consensus 58 ~~~~~~g~~~~l~C~~-~~~~~~~~~w~~~~~~~~~------------~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 124 (245)
...+..|+.+.|.|.+ .+.|.+.+.|++++..+.. ..+..+.. ...|.|.+++.+|.|.|+|.+
T Consensus 375 ~~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~---~~~L~i~~v~~~D~G~Y~C~~ 451 (581)
T 3o3u_N 375 NITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLP---NGSLFLPAVGIQDEGIFRCQA 451 (581)
T ss_dssp EEEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECT---TSCEEESSCCGGGCEEEEEEE
T ss_pred ccceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcC---CceEEEeccccccCeEEEEEE
Confidence 4567899999999999 7788899999997542210 11222222 237999999999999999999
Q ss_pred EeCCcee-EEEEEEEe--cCCCCccccCc-ccc-CCCeeEEEEEeCCCCCceEEEEEEEeec---CCCCeEEEe--eCCC
Q psy12131 125 SNNLGSS-QQFIQLSG--IPNIPVFQKSS-RRL-GPDGYRLVWQVDTYSGIIQYLLKFRERE---ELTPWRNIV--IPSD 194 (245)
Q Consensus 125 ~n~~g~~-~~~~~~~~--~~~~p~~~~~~-~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~ 194 (245)
.|..|.. ...+.|.+ .|.+|.+.... ... .+..+.|.|.+.+..|...+ .|+++.. ......... ....
T Consensus 452 ~n~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~~~~~~~~l~C~~~~~~P~~~i-~W~~~g~~l~~~~~~~~~~~~~~~~ 530 (581)
T 3o3u_N 452 MNRNGKETKSNYRVRVYQIPGKPEIVDSASELTAGVPNKVGTCVSEGSYPAGTL-SWHLDGKPLVPNEKGVSVKEQTRRH 530 (581)
T ss_dssp ECTTSCEEEEEEEEEEEBCCCCCEEESCCSEECTTSCEEEEEEEEEEEBSCCEE-EEEETTEECCTTSTTEEEEEEEEEC
T ss_pred EcCCCceeEEEEEEEEEcCCCCCEEEcCCcccccCCceeEEEEECCCCCCCCeE-EEEECCEECCCCCCeEEEEeeeEEc
Confidence 9988876 55555554 44445443332 122 33455779998653122222 2454433 111111110 0000
Q ss_pred CCCCcceeeeEEEecCCC-CCceEEEEEEEEecCCCCC
Q psy12131 195 GSLAGPIYTQSYNITGLQ-LFTQYEASVLAKNRFGWSR 231 (245)
Q Consensus 195 ~~~~~~~~~~~~~i~~l~-~~~~y~~~v~a~N~~G~~~ 231 (245)
.....-.....+.+..+. ......|+|.|.|..+...
T Consensus 531 ~~~g~y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~~~~ 568 (581)
T 3o3u_N 531 PETGLFTLQSELMVTPARGGDPRPTFSCSFSPGLPRHR 568 (581)
T ss_dssp TTTCCEEEEEEEEECCCTTSCSCCCEEEEEECSSCSSC
T ss_pred CCCceEEEEEEEEEEeccccCCCceEEEEEeccCCCCC
Confidence 000111113457777665 3334456666999986544
No 494
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.32 E-value=2.3e-10 Score=81.30 Aligned_cols=109 Identities=16% Similarity=0.236 Sum_probs=69.6
Q ss_pred eEEecCCCeEEEEEEEeecC--CCeEEEEEC--CEE---e----------------ccCCcEEEEec--CceeEEEEccC
Q psy12131 58 WIHTAPDMRAEIICNVYANP--PAKVEWFRD--GTA---I----------------TLGGRIDMHVS--SEKHSLLVRHI 112 (245)
Q Consensus 58 ~~~~~~g~~~~l~C~~~~~~--~~~~~w~~~--~~~---~----------------~~~~~~~~~~~--~~~~~l~i~~~ 112 (245)
.+.+.+|+.+.|.|.+.+.+ .+.+.|++. +.. + ....++.+... .....|.|.++
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 88 (221)
T 3m8o_H 9 GGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMNSL 88 (221)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEECSC
T ss_pred CEEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEECCC
Confidence 45688999999999998743 568999972 111 0 01245554432 34568999999
Q ss_pred CCCCCeEEEEEEEeCC--ceeEEEEEEEec---CCCCccc--cCccccCCCeeEEEEEeCC
Q psy12131 113 KDTDFGNYMCQASNNL--GSSQQFIQLSGI---PNIPVFQ--KSSRRLGPDGYRLVWQVDT 166 (245)
Q Consensus 113 ~~~d~g~y~C~~~n~~--g~~~~~~~~~~~---~~~p~~~--~~~~~~~~~~~~l~~~~~~ 166 (245)
+.+|.|.|.|.+.+.. ........+.+. +.+|... .......+..+.|.|.+.+
T Consensus 89 ~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~g~~v~L~C~~~~ 149 (221)
T 3m8o_H 89 KSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSLCSTQPDGNVVIACLVQG 149 (221)
T ss_dssp CGGGCEEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEECCSCCCTTEEEEEEEEEE
T ss_pred CHHHCEEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEecCcccccCCCEEEEEEEEe
Confidence 9999999999999863 112222233332 2333332 1111157889999999965
No 495
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=99.32 E-value=2.4e-09 Score=82.15 Aligned_cols=208 Identities=12% Similarity=0.026 Sum_probs=130.7
Q ss_pred ecceEEEeccCCCCCEEEEEEEEcCCCCceeeEEEEEEecCCeEEeecceE--EecCCCeEEEEEEEeecCC-C--eEEE
Q psy12131 9 NRESLDLDRVTLKLAGLYQCIASNNIGESTSKNFIVNVIYPPEVSVEKQWI--HTAPDMRAEIICNVYANPP-A--KVEW 83 (245)
Q Consensus 9 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~--~~~~g~~~~l~C~~~~~~~-~--~~~w 83 (245)
....+.|.++.+.....|+..|.+..|.......... ..+| .+..+ .......+.|.+....... . .+.|
T Consensus 148 ~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~~~~~-t~~~----~p~~l~~~~~~~~si~l~W~~p~~~~i~~Y~v~~ 222 (375)
T 3t1w_A 148 SVGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQ-TAVP----PPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRY 222 (375)
T ss_dssp TCCEEEEECCCTTCEEEEEEEEEETTEECCCEEEEEE-CCCC----CCEEEEEESCCSSCEEEEEECCSSCCCCEEEEEE
T ss_pred CcceEEEeCCCCCCEEEEEEEEEeCCcccCCeeeeee-cCCC----CCceeEEEecccCEEEEEEcCCCCCCccEEEEEE
Confidence 3455888999988888888888888765322222211 1222 11111 1223556666666521111 1 2334
Q ss_pred EECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeCCceeEE-EEEEEecCCCCccccCccccCCCeeEEEE
Q psy12131 84 FRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQ-FIQLSGIPNIPVFQKSSRRLGPDGYRLVW 162 (245)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~~l~~ 162 (245)
...+. ...............+.+.++.+.....|+..+.|..|.... .......|.+|..... ......++.|.|
T Consensus 223 ~~~~~---~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~~~~~~t~p~~P~~l~~-~~~~~~sv~l~W 298 (375)
T 3t1w_A 223 SPVKN---EEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLRGRQKTGLDSPTGIDF-SDITANSFTVHW 298 (375)
T ss_dssp EEGGG---TTCCEEEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCEEEEE-ESCCSSCEEEEE
T ss_pred EeCCC---CCCcEEEEcCCCcCEEEeCCCCCCCEEEEEEEEEcCCCcCCceeeEEecCCCCCCccEe-eeccCCEEEEEE
Confidence 33211 012222333344467889999998888889999998776443 3333345555554433 235678999999
Q ss_pred EeCCCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecCCCCCCCc
Q psy12131 163 QVDTYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRFGWSRPSK 234 (245)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~G~~~~s~ 234 (245)
.+.. +++.+|.+.|+.......+......... ..+.+.+|.+++.|.|+|.|.|..|.|.+..
T Consensus 299 ~~p~-~~~~~Y~v~~~~~~~~~~~~~~~~~~~~--------~~~~i~~L~p~t~Y~~~V~A~~~~G~s~p~s 361 (375)
T 3t1w_A 299 IAPR-ATITGYRIRHHPEHFSGRPREDRVPHSR--------NSITLTNLTPGTEYVVSIVALNGREESPLLI 361 (375)
T ss_dssp ECCS-SCCSEEEEEEEETTCCSSCEEEEEETTC--------CEEEECSCCTTCEEEEEEEEEETTEECCCEE
T ss_pred CCCC-cceeeEEEEEEECCCCCcceeEEcCCCc--------cEEEECCCCCCCEEEEEEEEECCCCCCCcee
Confidence 9853 5788999999987532455555444333 6899999999999999999999999998753
No 496
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.32 E-value=4.4e-11 Score=96.50 Aligned_cols=92 Identities=21% Similarity=0.373 Sum_probs=84.4
Q ss_pred cCCeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECCEEeccCCcEEEEecCceeEEEEccCCCCCCeEEEEEEEeC
Q psy12131 48 YPPEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNN 127 (245)
Q Consensus 48 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 127 (245)
..|.+...+....+.+|+++.+.|.+.|.|.|.+.|++++.++....++.+...+....|.|..+...|.|.|+|.|.|.
T Consensus 481 ~~P~~~~~~~~~~v~~G~~~~~~~~v~g~P~P~v~W~k~~~el~~s~~~~i~~~~~~~~L~I~~~~~~D~G~Yt~~A~N~ 560 (573)
T 3uto_A 481 AQPRFIVKPYGTEVGEGQSANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRYNGNDYGLTINRVKGDDKGEYTVRAKNS 560 (573)
T ss_dssp GSCEEEECCCCEEECTTSCEEEEEEEECSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred cCCccccCCCCcEEeCCCcEEEEEEEEccCCCeEEEEECCEEcccCCcEEEEEcCCEEEEEEcCCCcccCcEEEEEEEeC
Confidence 46777777777888999999999999999999999999999999988999988888899999999999999999999999
Q ss_pred CceeEEEEEEEe
Q psy12131 128 LGSSQQFIQLSG 139 (245)
Q Consensus 128 ~g~~~~~~~~~~ 139 (245)
.|..+..+.|.+
T Consensus 561 ~G~~~~~v~l~V 572 (573)
T 3uto_A 561 YGTKEEIVFLNV 572 (573)
T ss_dssp TEEEEEEEEEEE
T ss_pred CCcEEEEEEEEE
Confidence 999999888775
No 497
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.31 E-value=2.3e-11 Score=78.33 Aligned_cols=87 Identities=14% Similarity=0.235 Sum_probs=66.5
Q ss_pred ecceEEecCCCeEEEEEEEeecCCCeEEEEECCEE-ec-------cCCcEEEE-ecCceeEEEEccCCCCCCeEEEEEEE
Q psy12131 55 EKQWIHTAPDMRAEIICNVYANPPAKVEWFRDGTA-IT-------LGGRIDMH-VSSEKHSLLVRHIKDTDFGNYMCQAS 125 (245)
Q Consensus 55 ~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~~~-~~-------~~~~~~~~-~~~~~~~l~i~~~~~~d~g~y~C~~~ 125 (245)
.+..+.+.+|+++.|.|.+.+.|.+.+.|++.+.. +. ...++.+. .......|.|.+++.+|.|.|.|.+.
T Consensus 7 ~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 86 (124)
T 3rbg_A 7 HTETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLHY 86 (124)
T ss_dssp SEEEEEEETTSCEEEEEECCCCTTCEEEEECTTSCEEEETTEECSCSSCCEEEEEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCccEEEcCCCCEEEEeEEeccCCCEEEEECCCCeEEEEeccccccCCcEEEEeCCCCEEEEEECCCChHHCEEEEEEEE
Confidence 34566788999999999999999999999975432 21 33444443 23345789999999999999999999
Q ss_pred eCCceeEEEEEEEecCC
Q psy12131 126 NNLGSSQQFIQLSGIPN 142 (245)
Q Consensus 126 n~~g~~~~~~~~~~~~~ 142 (245)
|. |.....+.|.+...
T Consensus 87 n~-g~~~~~~~l~V~~~ 102 (124)
T 3rbg_A 87 SD-SVSTKEVKVIVLAT 102 (124)
T ss_dssp SS-SEEEEEEEEEEECC
T ss_pred cC-CCCcEEEEEEEEeC
Confidence 99 88777777776533
No 498
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.31 E-value=1.7e-10 Score=85.04 Aligned_cols=120 Identities=14% Similarity=0.162 Sum_probs=77.2
Q ss_pred CeEEeecceEEecCCCeEEEEEEEeecCCCeEEEEECC--EE---e----------c----cCCcEEEEe-cCceeEEEE
Q psy12131 50 PEVSVEKQWIHTAPDMRAEIICNVYANPPAKVEWFRDG--TA---I----------T----LGGRIDMHV-SSEKHSLLV 109 (245)
Q Consensus 50 p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~w~~~~--~~---~----------~----~~~~~~~~~-~~~~~~l~i 109 (245)
+.+...+..+.+.+|+.+.|.|.+.+.+.+.+.|++.. .. + . ...++.+.. ......|.|
T Consensus 25 ~~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I 104 (279)
T 2wbj_D 25 AVVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTV 104 (279)
T ss_dssp CCEEEECSEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEEE
T ss_pred ceEEeCCCeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEEE
Confidence 34445566778899999999999988788899999853 11 1 0 123555543 245668999
Q ss_pred ccCCCCCCeEEEEEEEeCCc------e--eEEEEEEEec---CCCCccccCc----cccCCCeeEEEEEeCCCCC
Q psy12131 110 RHIKDTDFGNYMCQASNNLG------S--SQQFIQLSGI---PNIPVFQKSS----RRLGPDGYRLVWQVDTYSG 169 (245)
Q Consensus 110 ~~~~~~d~g~y~C~~~n~~g------~--~~~~~~~~~~---~~~p~~~~~~----~~~~~~~~~l~~~~~~~~~ 169 (245)
.+++.+|.|.|.|.+.|..+ . ....+.+... +.+|.+.... ....+..+.|.|.+.+..|
T Consensus 105 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P 179 (279)
T 2wbj_D 105 TSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYP 179 (279)
T ss_dssp SSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBS
T ss_pred ccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEcC
Confidence 99999999999999999421 1 1123333321 1344433221 1225688999999966433
No 499
>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.31 E-value=6.7e-12 Score=80.89 Aligned_cols=81 Identities=21% Similarity=0.226 Sum_probs=66.2
Q ss_pred ccCCCeeEEEEEeC----CCCCceEEEEEEEeecCCCCeEEEeeCCCCCCCcceeeeEEEecCCCCCceEEEEEEEEecC
Q psy12131 152 RLGPDGYRLVWQVD----TYSGIIQYLLKFREREELTPWRNIVIPSDGSLAGPIYTQSYNITGLQLFTQYEASVLAKNRF 227 (245)
Q Consensus 152 ~~~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~a~N~~ 227 (245)
.....++.|.|.+. .++++.+|.|+|+... ...|... ..... ..+.|.+|.+++.|.|+|.|.|..
T Consensus 39 ~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~-~~~~~~~-~~~~~--------~~~~i~~L~p~t~Y~~~V~A~n~~ 108 (124)
T 2ed9_A 39 VVNSRSIKVSWLPPPSGTQNGFITGYKIRHRKTT-RRGEMET-LEPNN--------LWYLFTGLEKGSQYSFQVSAMTVN 108 (124)
T ss_dssp EEETTEEEEECBCCCTTTCCSCCCEEEEEEEESS-SSCCEEE-ECSSC--------SEEEEECCCSSCEEEECEEEECSS
T ss_pred EcCCCEEEEEEECcCCcCCCcEEeEEEEEEEECC-CCcceEE-ecCCc--------CEEEEcCCCCCCEEEEEEEEEcCC
Confidence 35677999999984 4678999999999875 4445443 22222 689999999999999999999999
Q ss_pred CCCCCCcceEEecCC
Q psy12131 228 GWSRPSKAYVFATEG 242 (245)
Q Consensus 228 G~~~~s~~~~~~t~~ 242 (245)
|.|.+|..+.++|.+
T Consensus 109 G~g~~S~~~~~~T~e 123 (124)
T 2ed9_A 109 GTGPPSNWYTAETPE 123 (124)
T ss_dssp CBCCCCCCEEEECCC
T ss_pred ccCCCCCCEEEECCC
Confidence 999999999999975
No 500
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.31 E-value=2.3e-11 Score=78.07 Aligned_cols=84 Identities=14% Similarity=0.122 Sum_probs=62.0
Q ss_pred eEEecCCCeEEEEEEEeecC--CCeEEEEECCEEecc-----CCcEEEEec---CceeEEEEccCCCCCCeEEEEEEEeC
Q psy12131 58 WIHTAPDMRAEIICNVYANP--PAKVEWFRDGTAITL-----GGRIDMHVS---SEKHSLLVRHIKDTDFGNYMCQASNN 127 (245)
Q Consensus 58 ~~~~~~g~~~~l~C~~~~~~--~~~~~w~~~~~~~~~-----~~~~~~~~~---~~~~~l~i~~~~~~d~g~y~C~~~n~ 127 (245)
.+.+.+|+.+.|.|.+.|.| .+.+.|++++..+.. ......... ...+.|.|.++..+|.|.|+|.|.|.
T Consensus 17 ~v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 96 (122)
T 3s35_X 17 GIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSG 96 (122)
T ss_dssp CEEEEETCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEEEECS
T ss_pred CEEEecCCeEEEEEEEEcCCCCcEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEEEEccC
Confidence 45677899999999999844 468999998763321 111111111 13457999999999999999999999
Q ss_pred CceeEEEEEEEecC
Q psy12131 128 LGSSQQFIQLSGIP 141 (245)
Q Consensus 128 ~g~~~~~~~~~~~~ 141 (245)
.|.....+.|.+..
T Consensus 97 ~g~~~~~~~l~V~~ 110 (122)
T 3s35_X 97 LMTKKNSTFVRVHE 110 (122)
T ss_dssp SCEEEEEEEEEEEE
T ss_pred CCceEEEEEEEEec
Confidence 99888887777653
Done!