Query psy12132
Match_columns 126
No_of_seqs 134 out of 1914
Neff 11.9
Searched_HMMs 29240
Date Fri Aug 16 19:32:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12132.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12132hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3knb_B Obscurin-like protein 1 99.9 1.1E-20 3.9E-25 99.4 11.3 84 2-85 22-105 (107)
2 3mtr_A N-CAM-1, NCAM-1, neural 99.9 1.7E-19 5.7E-24 105.3 17.0 120 3-124 28-154 (215)
3 3knb_A Titin; IG-like, titin, 99.8 5E-19 1.7E-23 92.0 11.9 83 2-84 14-98 (100)
4 2cqv_A MLCK, myosin light chai 99.8 3.7E-18 1.3E-22 90.6 12.7 84 2-85 16-99 (114)
5 3qp3_A Titin; I-SET IG-like, s 99.8 8E-18 2.7E-22 87.8 12.5 83 2-84 17-99 (103)
6 2e7c_A Myosin-binding protein 99.8 1.8E-17 6.2E-22 88.5 12.7 84 2-86 33-116 (118)
7 2bk8_A Connectin, M1, titin he 99.8 2.7E-17 9.2E-22 84.9 12.7 83 2-84 10-93 (97)
8 3puc_A Titin; I-SET IG-like do 99.8 2.1E-17 7.1E-22 85.5 12.3 83 2-84 15-97 (99)
9 3irg_B Obscurin-like protein 1 99.8 1.1E-17 3.8E-22 87.8 11.3 83 2-84 22-104 (107)
10 3lcy_A Titin; A-BAND, IG tande 99.8 6.1E-17 2.1E-21 92.9 15.0 113 2-114 16-133 (197)
11 2lu7_A Obscurin-like protein 1 99.8 1E-17 3.4E-22 84.4 9.3 69 2-71 5-73 (84)
12 2rik_A Titin; I-SET IG fold, p 99.8 2.8E-16 9.6E-21 94.8 17.0 112 2-113 14-128 (284)
13 1gxe_A Myosin binding protein 99.8 7.5E-18 2.6E-22 92.3 9.1 83 2-84 27-138 (139)
14 1g1c_A Immunoglobulin-like dom 99.8 9.4E-17 3.2E-21 83.0 12.5 83 2-84 14-97 (99)
15 2jll_A NCAM2, neural cell adhe 99.8 3.8E-16 1.3E-20 97.9 17.1 120 4-124 111-237 (389)
16 2nzi_A Titin; IG-domain, FNIII 99.8 3.1E-16 1E-20 95.5 16.1 121 3-124 114-240 (305)
17 4fa8_A Secreted protein BARF1; 99.7 1.8E-17 6E-22 96.3 9.9 112 1-113 1-135 (203)
18 2yuz_A Myosin-binding protein 99.7 2.7E-17 9.1E-22 85.5 9.6 79 2-84 16-94 (100)
19 3irg_A Titin; IG-like, titin, 99.7 8.8E-17 3E-21 83.2 11.6 83 2-84 14-98 (100)
20 1u2h_A APEG-1, aortic preferen 99.7 1E-16 3.5E-21 82.9 11.6 83 2-84 14-97 (99)
21 3b43_A Titin; I-SET IG fold, e 99.7 3E-16 1E-20 103.1 16.3 111 3-114 394-507 (570)
22 1nct_A Titin; cell adhesion, g 99.7 9E-18 3.1E-22 88.1 7.4 83 2-84 23-105 (106)
23 2va4_A NCAM2, N-CAM 2, neural 99.7 1.5E-16 5.1E-21 90.9 13.1 109 3-113 14-123 (192)
24 2kdg_A Myotilin; immonoglobuli 99.7 1.1E-16 3.9E-21 82.9 10.9 83 2-84 14-97 (100)
25 2kkq_A Myotilin; unknown funct 99.7 1.6E-16 5.6E-21 84.6 11.8 85 2-86 24-110 (116)
26 2v44_A NCAM2, neural cell adhe 99.7 5.8E-16 2E-20 88.5 14.8 112 2-114 11-126 (189)
27 1wit_A Twitchin 18TH IGSF modu 99.7 4.4E-17 1.5E-21 83.5 9.2 80 2-83 11-92 (93)
28 3b43_A Titin; I-SET IG fold, e 99.7 3.3E-16 1.1E-20 102.8 15.1 113 2-114 14-131 (570)
29 2jll_A NCAM2, neural cell adhe 99.7 4E-16 1.4E-20 97.9 14.9 111 2-113 9-129 (389)
30 2a38_A Titin; Z1Z2, structural 99.7 3.6E-16 1.2E-20 89.5 13.6 113 2-114 14-133 (194)
31 2yd1_A Tyrosine-protein phosph 99.7 2.2E-15 7.6E-20 87.6 16.2 113 2-114 15-140 (212)
32 1waa_A Titin; metal binding pr 99.7 1.1E-16 3.7E-21 82.1 9.4 69 2-71 14-82 (93)
33 2rik_A Titin; I-SET IG fold, p 99.7 2.3E-15 7.9E-20 90.8 16.7 110 4-113 110-221 (284)
34 2c5d_C AXL oncogene, tyrosine- 99.7 3.2E-15 1.1E-19 85.8 16.4 112 2-114 11-136 (195)
35 1he7_A High affinity nerve gro 99.7 3.2E-16 1.1E-20 84.1 11.3 80 7-86 14-100 (126)
36 2lvc_A Obscurin-like protein 1 99.7 3.1E-17 1E-21 83.8 6.8 68 3-71 16-83 (91)
37 2wv3_A Neuroplastin; igcam, me 99.7 1.9E-15 6.7E-20 86.4 15.1 106 3-114 12-122 (190)
38 2yd6_A PTPRD protein; hydrolas 99.7 3.7E-15 1.3E-19 86.7 16.5 113 2-114 15-138 (212)
39 2dm2_A Palladin; beta-sandwich 99.7 1.1E-16 3.9E-21 84.3 9.1 84 2-85 17-102 (110)
40 1fhg_A Telokin; immunoglobulin 99.7 6.2E-16 2.1E-20 86.1 12.5 86 2-87 50-136 (154)
41 1wwb_X Protein (brain derived 99.7 5.8E-16 2E-20 80.8 11.6 81 6-86 14-99 (103)
42 2edj_A Roundabout homolog 2; K 99.7 8.1E-17 2.8E-21 83.5 8.2 81 2-85 17-98 (100)
43 3bp6_B Programmed cell death 1 99.7 2.7E-16 9.2E-21 90.8 11.2 112 2-113 11-132 (202)
44 1x44_A Myosin-binding protein 99.7 4.5E-16 1.5E-20 81.1 10.7 68 2-70 16-85 (103)
45 1vca_A VCAM-D1,2, human vascul 99.7 2.1E-15 7.1E-20 87.4 14.0 115 4-122 12-129 (202)
46 2j8h_A Titin, connectin; cardi 99.7 1.6E-15 5.6E-20 87.1 13.3 112 2-113 13-133 (197)
47 2e6p_A Obscurin-like protein 1 99.7 4.9E-16 1.7E-20 81.1 9.9 79 3-84 20-98 (104)
48 2yr3_A Myosin light chain kina 99.7 1.6E-16 5.6E-21 82.2 7.8 79 2-83 20-98 (99)
49 1rhf_A Tyrosine-protein kinase 99.7 3.8E-15 1.3E-19 84.6 13.9 112 2-114 11-128 (182)
50 3kvq_A Vascular endothelial gr 99.7 2.2E-16 7.6E-21 82.8 8.1 83 2-86 19-101 (108)
51 2ckn_A Basic fibroblast growth 99.7 4.6E-16 1.6E-20 80.0 9.1 77 2-83 18-94 (95)
52 2cr3_A Basic fibroblast growth 99.7 4.7E-16 1.6E-20 80.6 9.0 80 3-87 13-92 (99)
53 2dav_A SLOW MYBP-C, myosin-bin 99.7 3.5E-16 1.2E-20 84.0 8.6 84 2-85 16-111 (126)
54 3rbs_A Myomesin-1; immunoglobu 99.7 8.5E-15 2.9E-19 85.2 15.0 110 2-111 11-143 (207)
55 2r15_A Myomesin-1; sarcomeric 99.7 2.8E-15 9.6E-20 86.9 12.8 108 7-114 16-147 (212)
56 2eo9_A Roundabout homolog 1; b 99.7 4.3E-16 1.5E-20 83.1 8.5 82 2-86 17-99 (118)
57 1epf_A NCAM, protein (neural c 99.7 9E-15 3.1E-19 83.6 14.6 113 2-114 11-130 (191)
58 2edf_A Obscurin; beta-sandwich 99.7 6.3E-16 2.2E-20 80.5 8.9 78 2-84 17-94 (103)
59 4f80_A Butyrophilin subfamily 99.7 6.7E-15 2.3E-19 86.4 13.9 120 2-123 13-155 (226)
60 2k1m_A Myosin-binding protein 99.7 2.1E-15 7.2E-20 77.5 10.3 66 2-68 17-82 (95)
61 3caf_A Fibroblast growth facto 99.7 3.6E-16 1.2E-20 81.0 7.3 79 3-83 18-99 (100)
62 2nzi_A Titin; IG-domain, FNIII 99.7 1.1E-14 3.8E-19 88.6 14.9 112 2-113 13-133 (305)
63 2dm7_A KIAA1556 protein; beta- 99.7 1.5E-15 5.3E-20 79.7 9.5 88 2-95 17-104 (108)
64 3cx2_A Myosin-binding protein 99.7 4.8E-15 1.6E-19 77.9 11.4 83 2-84 13-107 (108)
65 2edh_A Obscurin; structural ge 99.7 4.9E-15 1.7E-19 78.4 11.5 81 2-88 28-108 (113)
66 2dm3_A KIAA0992 protein, palla 99.7 2E-16 6.8E-21 83.3 6.0 84 2-85 18-102 (110)
67 2yuv_A Myosin-binding protein 99.7 3.6E-15 1.2E-19 77.3 10.7 77 3-84 18-94 (100)
68 3grw_A Fibroblast growth facto 99.7 5.6E-15 1.9E-19 87.2 12.0 112 3-114 25-144 (241)
69 2cpc_A KIAA0657 protein; immun 99.7 1E-14 3.4E-19 77.1 11.8 78 3-85 23-100 (113)
70 2e7b_A Obscurin; IG-like domai 99.6 1.3E-15 4.6E-20 79.3 8.1 65 2-67 17-81 (103)
71 3nl4_L Antigen binding fragmen 99.6 8.2E-15 2.8E-19 85.1 12.1 112 2-113 10-143 (213)
72 3ojm_B Fibroblast growth facto 99.6 3.8E-15 1.3E-19 87.3 10.6 112 3-114 29-148 (231)
73 1wwc_A Protein (NT-3 growth fa 99.6 7.8E-15 2.7E-19 78.2 10.9 79 9-87 21-103 (118)
74 2eny_A Obscurin; beta-sandwich 99.6 1.3E-15 4.5E-20 79.6 7.6 69 2-70 17-86 (104)
75 2cr6_A KIAA1556 protein, obscu 99.6 5E-16 1.7E-20 82.5 6.0 85 2-90 22-107 (115)
76 2dlt_A Myosin binding protein 99.6 8.3E-16 2.8E-20 80.5 6.8 80 2-82 17-96 (106)
77 2yd9_A Receptor-type tyrosine- 99.6 1.2E-14 4E-19 88.7 12.9 111 2-113 15-137 (304)
78 3qs7_E FL cytokine receptor; i 99.6 1.3E-14 4.4E-19 92.5 13.5 111 2-113 57-168 (423)
79 4hwu_A Fibroblast growth facto 99.6 3.6E-15 1.2E-19 76.6 9.0 79 2-86 10-88 (95)
80 2r15_A Myomesin-1; sarcomeric 99.6 1.3E-14 4.5E-19 84.1 12.5 82 3-84 127-209 (212)
81 2iep_A Muscle-specific kinase 99.6 1E-14 3.4E-19 83.4 11.7 111 2-114 16-130 (192)
82 3rbs_A Myomesin-1; immunoglobu 99.6 3.4E-15 1.2E-19 86.9 9.8 78 4-83 127-205 (207)
83 2a38_A Titin; Z1Z2, structural 99.6 1.2E-14 4E-19 83.2 11.8 81 3-83 113-193 (194)
84 3kld_A Contactin 4, axcam, BIG 99.6 5.4E-15 1.8E-19 92.9 11.0 107 3-113 215-324 (384)
85 1moe_A Anti-CEA MAB T84.66; an 99.6 1.9E-14 6.6E-19 85.0 12.5 122 2-123 10-158 (240)
86 3m45_A Cell adhesion molecule 99.6 2E-14 6.9E-19 75.2 11.2 82 2-84 15-105 (108)
87 2dku_A KIAA1556 protein; beta- 99.6 1.6E-14 5.6E-19 75.1 10.8 65 2-67 17-81 (103)
88 3auv_A SC-DSFV derived from th 99.6 4.9E-14 1.7E-18 85.1 14.2 122 2-123 21-173 (276)
89 1f97_A Junction adhesion molec 99.6 2.7E-14 9.3E-19 82.6 12.4 108 2-113 10-134 (212)
90 2znx_A SCFV; fluorotryptohpan, 99.6 8E-14 2.7E-18 82.7 14.4 122 2-123 10-161 (242)
91 1hng_A CD2; T lymphocyte adhes 99.6 8.1E-15 2.8E-19 83.2 9.6 103 3-113 6-124 (176)
92 3mj8_L Stimulatory hamster ant 99.6 2.5E-14 8.5E-19 83.1 11.8 110 3-112 10-142 (213)
93 2j8h_A Titin, connectin; cardi 99.6 1.1E-14 3.8E-19 83.6 10.2 82 3-84 114-196 (197)
94 3sbw_C Programmed cell death 1 99.6 8E-14 2.7E-18 81.3 13.9 111 2-113 10-145 (222)
95 2edk_A Myosin-binding protein 99.6 8E-16 2.7E-20 79.9 4.8 68 2-70 17-88 (101)
96 1gsm_A Madcam-1, mucosal addre 99.6 7E-14 2.4E-18 81.3 13.2 114 3-123 17-135 (210)
97 1pd6_A Cardiac MYBP-C;, myosin 99.6 8.8E-15 3E-19 76.4 8.6 67 3-70 26-93 (104)
98 2wim_A N-CAM 2, NCAM2, neural 99.6 2.8E-14 9.4E-19 86.3 12.1 111 2-113 13-127 (291)
99 3r06_A Anti-mouse CD3epsilon a 99.6 3.8E-14 1.3E-18 82.3 12.2 112 2-113 10-141 (213)
100 3bfo_A Mucosa-associated lymph 99.6 1.5E-14 5E-19 73.7 9.2 73 2-83 12-85 (91)
101 1lk3_L 9D7 light chain; antige 99.6 5.7E-14 1.9E-18 81.5 12.9 112 2-113 9-140 (210)
102 3esu_F Antibody 14B7* light ch 99.6 8.9E-14 3E-18 82.7 13.9 122 2-123 13-170 (250)
103 2edn_A Myosin-binding protein 99.6 8.4E-16 2.9E-20 81.7 4.6 84 2-85 21-116 (118)
104 2yd9_A Receptor-type tyrosine- 99.6 2.5E-14 8.5E-19 87.2 11.7 109 3-114 118-235 (304)
105 3p3y_A Neurofascin; IG domains 99.6 1.1E-14 3.8E-19 91.6 10.3 109 3-114 232-342 (404)
106 3sgj_C Human FCG3A receptor; r 99.6 3.4E-14 1.2E-18 82.4 11.5 101 3-115 17-119 (204)
107 2e6q_A Obscurin-like protein 1 99.6 3.7E-14 1.3E-18 74.8 10.6 78 2-84 17-104 (112)
108 3d9a_L Light chain of hyhel10 99.6 5.1E-14 1.8E-18 81.8 12.1 111 2-112 10-140 (213)
109 3jz7_A MCAR, CAR, coxsackievir 99.6 5E-14 1.7E-18 81.6 11.9 112 2-113 9-151 (214)
110 3oq3_B IFN-alpha/beta binding 99.6 3.4E-14 1.2E-18 87.6 11.7 104 5-112 140-256 (329)
111 3qs9_E FL cytokine receptor; i 99.6 3.1E-14 1E-18 93.0 11.9 102 3-114 336-437 (527)
112 1fnl_A Low affinity immunoglob 99.6 1.2E-13 4.1E-18 78.2 12.8 100 3-114 17-118 (175)
113 3p2t_A Leukocyte immunoglobuli 99.6 1.9E-14 6.7E-19 82.7 9.7 106 4-111 15-126 (196)
114 2wv3_A Neuroplastin; igcam, me 99.6 1.7E-13 5.7E-18 78.3 13.5 81 3-83 102-188 (190)
115 3qs7_E FL cytokine receptor; i 99.6 3.8E-14 1.3E-18 90.3 11.8 108 3-113 237-355 (423)
116 2y23_A Myomesin; structural pr 99.6 1.8E-13 6.1E-18 83.4 14.4 109 3-112 11-136 (312)
117 2xot_A Amphoterin-induced prot 99.6 1.3E-14 4.3E-19 90.8 9.4 98 2-113 255-356 (361)
118 2y25_A Myomesin; structural pr 99.6 3.8E-14 1.3E-18 86.6 11.4 82 3-84 232-314 (317)
119 3s35_X Vascular endothelial gr 99.6 2.1E-14 7E-19 76.9 9.0 83 3-85 18-110 (122)
120 2ec8_A MAST/stem cell growth f 99.6 1E-14 3.5E-19 94.8 9.2 108 3-114 323-436 (524)
121 2eo1_A OBSCN protein, cDNA FLJ 99.6 1.5E-14 5E-19 75.2 7.9 67 3-70 21-87 (102)
122 3tv3_L PGT128 light chain, IG 99.6 6.4E-14 2.2E-18 81.3 11.3 108 3-112 10-139 (211)
123 1gl4_B Basement membrane-speci 99.6 3.5E-14 1.2E-18 73.2 9.1 76 3-83 20-96 (98)
124 1bih_A Hemolin; insect immunit 99.6 3.3E-14 1.1E-18 89.3 10.7 112 3-114 222-339 (395)
125 2d3v_A Leukocyte immunoglobuli 99.6 5.2E-14 1.8E-18 81.0 10.7 107 4-112 15-127 (196)
126 2if7_A SLAM family member 6; N 99.6 8.9E-14 3E-18 80.0 11.6 109 2-113 7-138 (193)
127 3rbg_A Cytotoxic and regulator 99.6 6.7E-14 2.3E-18 75.2 10.3 85 2-87 10-103 (124)
128 2v5t_A NCAM2, N-CAM 2, neural 99.6 3.6E-14 1.2E-18 80.8 9.8 109 2-113 11-127 (189)
129 3lcy_A Titin; A-BAND, IG tande 99.6 7.7E-14 2.6E-18 79.9 11.2 82 3-84 113-195 (197)
130 1nqb_A Single-chain antibody f 99.6 6E-13 2E-17 79.6 15.3 112 2-113 9-150 (256)
131 3k0w_A Mucosa-associated lymph 99.6 8.5E-14 2.9E-18 81.3 11.4 104 2-114 27-148 (218)
132 1f3r_B FV antibody fragment; I 99.6 5E-13 1.7E-17 79.9 14.8 120 2-123 9-176 (257)
133 2ghw_B Anti-SARS SCFV antibody 99.6 3.1E-13 1.1E-17 80.2 13.8 120 2-123 11-172 (247)
134 3sob_L Antibody light chain; b 99.6 9.8E-14 3.3E-18 81.7 11.6 111 3-113 34-164 (237)
135 3ux9_B SCFV antibody; five hel 99.6 2.2E-13 7.6E-18 81.2 13.2 121 3-123 12-173 (256)
136 2vr9_A Roundabout 1, ROBO; imm 99.6 2.4E-14 8.3E-19 83.3 8.8 112 2-113 18-138 (217)
137 3s96_B 3B5H10 FAB light chain; 99.6 8.8E-14 3E-18 81.0 11.2 109 3-111 10-148 (218)
138 1qz1_A Neural cell adhesion mo 99.6 4.3E-13 1.5E-17 81.1 14.5 112 2-113 11-129 (291)
139 3laf_A Deleted in colorectal c 99.6 7.5E-14 2.6E-18 87.9 11.5 109 3-114 231-342 (403)
140 2cry_A KIN of IRRE-like protei 99.6 1.9E-15 6.3E-20 81.1 3.6 84 2-85 22-113 (122)
141 1svz_A Immunoglobulin;, single 99.6 5.1E-13 1.7E-17 79.3 14.4 122 2-123 10-166 (247)
142 1q0x_L FAB 9B1, light chain; a 99.6 1.8E-13 6.2E-18 79.4 12.1 112 2-113 9-144 (212)
143 2y23_A Myomesin; structural pr 99.6 4.5E-13 1.5E-17 81.7 14.2 113 2-114 116-251 (312)
144 2c1o_A IGK-C protein; FAB frag 99.6 1.3E-13 4.3E-18 82.2 11.3 112 2-113 47-183 (254)
145 1itb_B Type 1 interleukin-1 re 99.6 2.4E-13 8.2E-18 83.1 12.8 108 3-113 113-238 (315)
146 2v5y_A Receptor-type tyrosine- 99.6 6E-14 2.1E-18 94.5 10.9 122 2-124 173-303 (731)
147 2v5t_A NCAM2, N-CAM 2, neural 99.6 1.4E-13 4.8E-18 78.4 10.9 79 3-83 108-186 (189)
148 2ec8_A MAST/stem cell growth f 99.5 2.1E-13 7.1E-18 88.7 12.9 113 3-115 221-344 (524)
149 3uto_A Twitchin; kinase, muscl 99.5 1.7E-13 5.7E-18 90.3 12.5 82 2-83 491-572 (573)
150 2wng_A Tyrosine-protein phosph 99.5 1.1E-13 3.9E-18 85.1 11.1 112 2-113 12-146 (327)
151 3so5_A LIG-3, leucine-rich rep 99.5 1.8E-13 6E-18 71.8 10.3 81 2-82 19-110 (112)
152 4fa8_A Secreted protein BARF1; 99.5 3.1E-14 1.1E-18 82.6 8.0 77 3-79 116-196 (203)
153 3kld_A Contactin 4, axcam, BIG 99.5 7.7E-14 2.7E-18 87.7 10.3 79 2-84 304-382 (384)
154 1f2q_A High affinity immunoglo 99.5 1.2E-13 4.2E-18 78.1 10.3 100 3-114 14-115 (176)
155 1z7z_I Intercellular adhesion 99.5 1.7E-13 5.8E-18 87.5 11.8 118 3-123 96-227 (450)
156 2v5m_A Dscam; neurobiology SPL 99.5 1.5E-13 5E-18 86.2 11.1 118 3-123 14-142 (388)
157 2ocw_A Polymeric-immunoglobuli 99.5 5E-13 1.7E-17 87.9 14.0 112 2-113 9-141 (585)
158 4fqp_A Poliovirus receptor; im 99.5 1.6E-13 5.5E-18 84.0 10.9 80 4-89 228-308 (313)
159 2gjj_A A21 single-chain antibo 99.5 3.7E-13 1.3E-17 80.8 12.3 123 2-124 14-178 (264)
160 2y25_A Myomesin; structural pr 99.5 1.2E-13 3.9E-18 84.5 10.2 110 5-114 110-252 (317)
161 1bih_A Hemolin; insect immunit 99.5 3.2E-14 1.1E-18 89.3 7.9 109 2-112 15-129 (395)
162 3b5h_A Cervical EMMPRIN, HAB18 99.5 5.4E-13 1.9E-17 75.8 12.3 82 3-84 93-182 (184)
163 2wim_A N-CAM 2, NCAM2, neural 99.5 1.2E-13 4.2E-18 83.5 10.1 81 4-86 205-285 (291)
164 4dzb_B Vbeta2 (MAIT T cell rec 99.5 4.2E-13 1.4E-17 79.6 12.1 121 2-123 10-163 (246)
165 3p3y_A Neurofascin; IG domains 99.5 3.7E-14 1.3E-18 89.2 7.9 107 3-111 27-143 (404)
166 2v9t_A Roundabout homolog 1; s 99.5 5.9E-14 2E-18 74.6 7.5 76 2-77 18-100 (117)
167 3r4d_A CEA-related cell adhesi 99.5 6.8E-13 2.3E-17 76.6 12.6 108 3-113 9-139 (208)
168 3rjd_A High affinity immunoglo 99.5 3.7E-13 1.3E-17 80.2 11.8 113 3-123 92-211 (262)
169 1ry7_B FGFR-3, fibroblast grow 99.5 2.7E-14 9.1E-19 88.0 7.0 111 3-113 133-251 (334)
170 3laf_A Deleted in colorectal c 99.5 1.6E-13 5.6E-18 86.3 10.6 80 3-85 322-401 (403)
171 1z9m_A GAPA225; nectin-like, I 99.5 2.7E-13 9.1E-18 74.7 10.2 82 2-85 47-138 (145)
172 2gi7_A GPVI protein; IG-like d 99.5 4.7E-13 1.6E-17 76.3 11.6 98 4-112 18-121 (184)
173 3b5h_A Cervical EMMPRIN, HAB18 99.5 9E-13 3.1E-17 74.9 12.7 100 3-112 8-111 (184)
174 3gkz_A Anti-methamphetamine si 99.5 4.8E-12 1.7E-16 75.5 16.4 121 2-123 17-179 (257)
175 1nbq_A JAM, junctional adhesio 99.5 6E-14 2E-18 81.0 7.9 108 2-113 13-137 (209)
176 2yd6_A PTPRD protein; hydrolas 99.5 3.3E-13 1.1E-17 78.4 10.9 74 3-76 118-194 (212)
177 3bkj_L WO2 IGG2A FAB fragment 99.5 3.4E-13 1.2E-17 80.3 11.1 112 2-113 43-179 (252)
178 2va4_A NCAM2, N-CAM 2, neural 99.5 1.1E-12 3.9E-17 74.7 12.9 80 4-83 105-191 (192)
179 3umt_A SCFV heavy chain and li 99.5 1.3E-12 4.6E-17 77.9 13.6 119 3-123 12-175 (256)
180 2d9q_B Granulocyte colony-stim 99.5 2.6E-13 8.7E-18 83.3 10.7 121 2-124 9-139 (313)
181 3uzq_A Anti-dengue MAB 4E11; d 99.5 1.4E-12 4.9E-17 77.7 13.7 112 2-113 10-162 (253)
182 1x9q_A SCFV, 4M5.3 anti-fluore 99.5 1.5E-12 5.2E-17 78.2 13.9 123 2-124 24-191 (268)
183 2fbo_J V1V2;, variable region- 99.5 1.7E-13 5.9E-18 81.2 9.6 112 2-114 11-166 (250)
184 2xzc_L FAB A.17 light chain; i 99.5 2.9E-13 1E-17 78.8 10.4 112 2-113 9-143 (216)
185 1cs6_A Axonin-1; neural cell a 99.5 1.9E-13 6.5E-18 85.6 10.1 106 3-114 217-324 (382)
186 2x1w_L Vascular endothelial gr 99.5 1.4E-13 4.7E-18 80.2 8.8 106 2-111 16-132 (213)
187 1uct_A Immunoglobulin alpha FC 99.5 2.8E-13 9.7E-18 79.3 10.0 107 4-112 19-133 (218)
188 2v5m_A Dscam; neurobiology SPL 99.5 2.6E-13 9E-18 85.0 10.5 108 3-114 222-337 (388)
189 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.5 1E-12 3.6E-17 78.5 12.7 119 2-123 12-173 (256)
190 1qz1_A Neural cell adhesion mo 99.5 4.2E-13 1.4E-17 81.1 11.1 80 3-84 206-289 (291)
191 3dmk_A DOWN syndrome cell adhe 99.5 3.1E-12 1.1E-16 87.0 16.3 110 3-113 439-555 (816)
192 1dr9_A B7-1 (CD80), T lymphocy 99.5 1.8E-13 6.2E-18 78.8 9.0 110 2-113 3-136 (201)
193 1nkr_A P58-CL42 KIR; inhibitor 99.5 1E-12 3.5E-17 75.9 12.1 107 4-111 18-134 (201)
194 2iep_A Muscle-specific kinase 99.5 1.2E-13 4E-18 78.9 7.9 78 3-83 110-188 (192)
195 1wio_A CD4, T-cell surface gly 99.5 1.2E-13 4.1E-18 86.1 8.5 100 3-113 186-310 (363)
196 1e07_A Carcinoembryonic antige 99.5 8.9E-13 3E-17 87.6 13.0 108 4-114 478-589 (642)
197 2v9r_A Roundabout homolog 1; p 99.5 4.2E-13 1.4E-17 77.6 10.2 112 2-113 18-141 (212)
198 3juy_B 3B3 single chain varian 99.5 2.5E-12 8.5E-17 76.8 13.8 121 2-123 15-187 (256)
199 1i1r_A GP130, interleukin-6 re 99.5 1.9E-12 6.6E-17 79.1 13.5 119 2-124 13-143 (303)
200 2p1y_A Bispecific alpha/beta T 99.5 1.7E-12 6E-17 76.5 12.9 119 2-123 9-164 (238)
201 1hnf_A CD2; T lymphocyte adhes 99.5 1.7E-13 5.9E-18 78.2 8.3 103 3-113 9-129 (182)
202 3nfj_J T cell receptor beta ch 99.5 9.6E-13 3.3E-17 78.0 11.8 112 2-113 10-153 (245)
203 3rjd_A High affinity immunoglo 99.5 2E-12 6.7E-17 77.1 12.9 99 3-113 11-111 (262)
204 2yd1_A Tyrosine-protein phosph 99.5 3.1E-13 1.1E-17 78.5 9.1 78 3-84 120-199 (212)
205 2ifg_A High affinity nerve gro 99.5 5.7E-13 2E-17 82.8 10.7 81 5-85 258-345 (347)
206 3ejj_X Macrophage colony-stimu 99.5 8.6E-13 2.9E-17 79.7 11.3 108 3-113 99-215 (289)
207 1qok_A MFE-23 recombinant anti 99.5 2.7E-12 9.2E-17 77.7 13.4 119 2-123 35-198 (282)
208 2ens_A Advanced glycosylation 99.5 3.3E-14 1.1E-18 73.1 4.3 73 2-83 19-93 (96)
209 3ry4_A Low affinity immunoglob 99.5 1.5E-12 5E-17 73.1 11.3 99 3-113 14-114 (170)
210 1oll_A NK receptor; immune sys 99.5 2.3E-12 7.8E-17 73.7 12.2 107 4-112 14-126 (188)
211 2rcj_C Light chain; immunoglob 99.5 1.2E-12 4E-17 85.2 12.3 112 2-113 9-143 (523)
212 2rcj_C Light chain; immunoglob 99.5 1.3E-12 4.4E-17 85.0 12.5 108 5-113 231-348 (523)
213 3s97_C Contactin-1; carbonic a 99.5 7.4E-14 2.5E-18 80.2 6.0 110 2-113 17-142 (201)
214 1ugn_A LIR1, leukocyte immunog 99.5 9.2E-14 3.1E-18 80.0 6.4 107 4-112 15-128 (198)
215 1ccz_A Protein (CD58); LFA-3, 99.5 8.1E-13 2.8E-17 74.7 10.0 102 2-113 4-119 (171)
216 2v9r_A Roundabout homolog 1; p 99.5 3.4E-13 1.2E-17 78.0 8.7 80 3-85 121-202 (212)
217 1cs6_A Axonin-1; neural cell a 99.5 5.7E-13 1.9E-17 83.4 10.2 78 3-84 304-381 (382)
218 4dep_C Interleukin-1 receptor 99.5 3.6E-13 1.2E-17 83.5 9.2 103 4-110 131-252 (349)
219 1c1e_H Catalytic antibody 1E9 99.5 3.9E-12 1.3E-16 74.2 13.1 109 2-110 9-150 (219)
220 2zg1_A Sialic acid-binding IG- 99.5 1.4E-12 4.9E-17 75.6 11.2 110 2-111 9-150 (214)
221 3nl4_H Antigen binding fragmen 99.5 3.1E-12 1.1E-16 74.5 12.5 112 2-113 8-149 (215)
222 2ny1_B T-cell surface glycopro 99.5 2E-13 6.7E-18 77.7 7.1 105 2-112 4-125 (184)
223 3s97_C Contactin-1; carbonic a 99.5 3.5E-13 1.2E-17 77.4 8.2 78 3-84 123-200 (201)
224 2pet_A Lutheran blood group gl 99.5 2.3E-13 8E-18 79.7 7.4 109 2-113 9-149 (231)
225 3qs9_E FL cytokine receptor; i 99.5 4.1E-12 1.4E-16 83.1 13.6 112 2-114 57-169 (527)
226 2o26_X MAST/stem cell growth f 99.5 8.7E-13 3E-17 79.9 9.8 82 3-84 198-287 (290)
227 1nfd_E H57 FAB; complex (immun 99.5 2.7E-13 9.2E-18 78.7 7.2 112 2-113 8-142 (212)
228 1pz5_B Heavy chain of FAB (SYA 99.5 4.4E-12 1.5E-16 74.0 12.4 110 2-111 9-152 (220)
229 4dep_C Interleukin-1 receptor 99.5 1.7E-12 5.8E-17 80.4 11.1 103 2-108 16-144 (349)
230 2ifg_A High affinity nerve gro 99.5 1.4E-13 4.8E-18 85.6 6.2 108 2-113 167-275 (347)
231 3o4o_C Interleukin-1 receptor 99.5 1.3E-13 4.6E-18 85.1 6.1 102 2-107 27-143 (339)
232 3grw_A Fibroblast growth facto 99.5 1.2E-12 4.2E-17 77.2 10.0 85 3-87 124-220 (241)
233 2j6e_L IGM, FAB light chain; a 99.5 6.8E-13 2.3E-17 78.0 8.9 112 2-113 28-164 (234)
234 3pv7_A B7-H6, IG-like domain-c 99.5 2.8E-12 9.4E-17 76.1 11.5 109 3-111 13-145 (248)
235 3d9a_H Heavy chain of hyhel10 99.5 3.9E-12 1.3E-16 73.8 11.9 109 2-111 9-145 (210)
236 4ei6_B Vbeta16 XV19 type II na 99.5 5.9E-12 2E-16 74.6 12.8 120 2-123 11-162 (245)
237 1dee_B IGM RF 2A2; FAB-IBP com 99.4 1.2E-11 4.2E-16 72.5 14.0 112 2-113 9-155 (223)
238 3omz_A Human vdelta1 gamma del 99.4 1.3E-12 4.5E-17 78.1 9.9 122 2-124 11-175 (259)
239 1e07_A Carcinoembryonic antige 99.4 8.6E-12 2.9E-16 82.9 14.7 107 4-113 122-232 (642)
240 1za6_B IGG heavy chain; immuno 99.4 1.6E-12 5.4E-17 80.7 10.5 112 2-113 9-149 (344)
241 3oq3_B IFN-alpha/beta binding 99.4 2.5E-13 8.5E-18 83.8 6.8 106 2-112 38-156 (329)
242 3eow_R Poliovirus receptor; im 99.4 1.5E-13 5.1E-18 80.3 5.5 112 2-113 8-146 (221)
243 2v44_A NCAM2, neural cell adhe 99.4 7E-13 2.4E-17 75.6 8.1 75 3-80 106-182 (189)
244 2fbj_H IGA-kappa J539 FAB (hea 99.4 1E-11 3.5E-16 72.7 13.2 112 2-113 9-151 (220)
245 2id5_A Lingo-1, leucine rich r 99.4 2.9E-13 1E-17 87.2 7.2 79 3-84 395-476 (477)
246 2ocw_A Polymeric-immunoglobuli 99.4 5.6E-12 1.9E-16 82.9 13.4 107 3-110 341-468 (585)
247 3mj6_A Junctional adhesion mol 99.4 4.2E-13 1.4E-17 80.4 7.4 104 2-108 14-142 (268)
248 2vr9_A Roundabout 1, ROBO; imm 99.4 1E-12 3.6E-17 76.4 8.9 77 3-82 118-203 (217)
249 3qr2_A Basigin; CD147, EMMPRIN 99.4 2.7E-13 9.3E-18 73.9 6.0 74 2-75 30-116 (137)
250 1itb_B Type 1 interleukin-1 re 99.4 2E-12 6.7E-17 79.1 10.4 82 3-84 219-313 (315)
251 3o4o_C Interleukin-1 receptor 99.4 8E-13 2.8E-17 81.6 8.7 115 4-122 131-265 (339)
252 3pl6_D MBP peptide / T-cell re 99.4 4.8E-12 1.7E-16 75.9 11.9 110 3-113 36-175 (268)
253 3fku_X Neutralizing antibody F 99.4 4.1E-12 1.4E-16 76.9 11.4 123 2-124 9-179 (280)
254 2x1w_L Vascular endothelial gr 99.4 1.3E-12 4.5E-17 76.0 9.0 82 4-85 116-207 (213)
255 3bqu_C 3H6 FAB light chain; be 99.4 8.1E-14 2.8E-18 82.0 3.9 111 3-113 33-163 (233)
256 3ejj_X Macrophage colony-stimu 99.4 5.7E-12 2E-16 76.1 12.1 84 4-87 197-283 (289)
257 1op3_H FAB 2G12, heavy chain; 99.4 3.9E-12 1.3E-16 74.6 10.9 112 2-113 9-157 (225)
258 4dkd_C Macrophage colony-stimu 99.4 4E-13 1.4E-17 81.2 6.8 107 3-113 99-215 (292)
259 1hxm_B Gamma-delta T-cell rece 99.4 1.5E-11 5.1E-16 72.9 13.4 121 2-123 10-170 (242)
260 3mjg_X Beta-type platelet-deri 99.4 2.1E-12 7.2E-17 78.1 9.9 82 3-84 191-277 (289)
261 3vh8_G Killer cell immunoglobu 99.4 1.1E-11 3.7E-16 76.0 13.0 105 5-110 130-244 (316)
262 4fmk_A Poliovirus receptor-rel 99.4 1.9E-12 6.5E-17 75.2 9.2 112 2-113 10-150 (225)
263 3dmk_A DOWN syndrome cell adhe 99.4 5.1E-12 1.7E-16 86.0 12.3 108 3-113 536-648 (816)
264 2ny1_B T-cell surface glycopro 99.4 2.9E-12 9.8E-17 72.9 9.3 74 3-86 107-180 (184)
265 2c5d_C AXL oncogene, tyrosine- 99.4 3.7E-12 1.3E-16 73.0 9.8 74 3-83 116-191 (195)
266 1b6u_A KIR2DL3, P58 killer cel 99.4 9.7E-12 3.3E-16 74.6 11.9 108 4-112 17-134 (257)
267 1epf_A NCAM, protein (neural c 99.4 1.9E-12 6.7E-17 73.8 8.5 74 3-79 110-185 (191)
268 1wio_A CD4, T-cell surface gly 99.4 1.4E-12 4.9E-17 81.3 8.5 96 4-110 107-202 (363)
269 1qgc_4 Protein (immunoglobulin 99.4 5.1E-12 1.7E-16 80.4 11.2 110 2-111 10-143 (438)
270 1q9r_B S25-2 FAB (IGG1K) heavy 99.4 9.9E-12 3.4E-16 72.6 11.5 110 2-111 9-154 (222)
271 3r4d_A CEA-related cell adhesi 99.4 2.4E-12 8.2E-17 74.3 8.7 76 5-83 122-198 (208)
272 2o26_X MAST/stem cell growth f 99.4 2.7E-12 9.3E-17 77.7 9.3 108 3-114 101-218 (290)
273 1jbj_A CD3 epsilon and gamma e 99.4 2.1E-12 7.2E-17 73.8 8.4 69 4-83 10-79 (186)
274 1jhl_L IGG1-kappa D11.15 FV (l 99.4 6.5E-12 2.2E-16 65.8 9.6 70 2-71 10-93 (108)
275 2fbo_J V1V2;, variable region- 99.4 1.5E-12 5.2E-17 77.1 7.8 77 3-82 146-249 (250)
276 2gki_A Nuclease; anti-DNA anti 99.4 1.3E-11 4.5E-16 75.1 12.1 112 2-113 31-188 (291)
277 4frw_A Poliovirus receptor-rel 99.4 5.7E-12 1.9E-16 72.9 10.1 112 2-113 8-147 (218)
278 3q5y_A TCR N15 beta; IG, T cel 99.4 1.5E-11 5.2E-16 72.6 12.0 111 2-113 11-151 (240)
279 3zyj_A Leucine-rich repeat-con 99.4 1.8E-12 6E-17 83.0 8.5 81 2-86 350-434 (440)
280 1qgc_4 Protein (immunoglobulin 99.4 7.6E-12 2.6E-16 79.6 11.4 106 7-112 130-246 (438)
281 2wng_A Tyrosine-protein phosph 99.4 3.2E-12 1.1E-16 78.7 9.3 110 4-113 128-249 (327)
282 3bae_H WO2 IGG2A FAB fragment 99.4 5.4E-12 1.9E-16 74.2 10.0 110 2-111 9-157 (228)
283 2dru_A Chimera of CD48 antigen 99.4 5.1E-12 1.7E-16 72.0 9.5 101 2-110 8-127 (180)
284 1pko_A Myelin oligodendrocyte 99.4 2.4E-11 8.3E-16 66.3 11.6 83 2-84 15-120 (139)
285 2rgs_A I, IG gamma-2B heavy ch 99.4 2.1E-12 7.2E-17 75.5 7.7 108 5-112 23-145 (218)
286 2oz4_A Intercellular adhesion 99.4 4.5E-11 1.6E-15 71.6 13.4 101 3-109 13-123 (265)
287 2vol_A Murine IGG FC; FC, zinc 99.4 7.4E-12 2.5E-16 72.6 9.7 109 5-113 15-138 (207)
288 3u83_A Poliovirus receptor-rel 99.4 3.1E-12 1.1E-16 78.6 8.5 112 2-113 23-165 (331)
289 3khq_A B-cell antigen receptor 99.4 5.3E-12 1.8E-16 68.6 8.4 70 2-73 26-101 (133)
290 3mjg_X Beta-type platelet-deri 99.4 6.1E-12 2.1E-16 76.0 9.6 103 2-110 9-121 (289)
291 3u83_A Poliovirus receptor-rel 99.4 4.5E-12 1.5E-16 77.9 9.0 107 3-114 142-262 (331)
292 3jz7_A MCAR, CAR, coxsackievir 99.4 1.2E-12 4.2E-17 75.6 6.1 77 4-84 132-211 (214)
293 3q0h_A T cell immunoreceptor w 99.4 8.2E-12 2.8E-16 66.4 8.8 81 2-85 12-108 (117)
294 1n26_A IL-6 receptor alpha cha 99.4 1.1E-11 3.8E-16 76.5 10.6 114 4-124 17-134 (325)
295 1f97_A Junction adhesion molec 99.4 2E-12 6.9E-17 74.7 6.9 81 4-84 115-206 (212)
296 3m8o_H Immunoglobulin A1 heavy 99.4 5.3E-11 1.8E-15 69.5 13.0 112 2-113 9-152 (221)
297 1p6f_A NKP46, natural cytotoxi 99.4 4E-11 1.4E-15 71.3 12.5 108 4-113 17-130 (242)
298 1mju_H Immunoglobulin MS6-12; 99.4 1.3E-11 4.4E-16 72.6 10.2 111 2-112 9-149 (227)
299 3k0w_A Mucosa-associated lymph 99.4 7.2E-12 2.5E-16 73.1 8.9 73 3-84 128-201 (218)
300 1z7z_I Intercellular adhesion 99.4 5.4E-12 1.9E-16 80.6 9.0 110 2-123 8-125 (450)
301 2wbj_D OB TCR; transmembrane, 99.4 1.1E-11 3.8E-16 74.9 9.9 112 2-113 33-179 (279)
302 1c5d_H Monoclonal antibody aga 99.4 3.7E-11 1.3E-15 70.0 11.7 110 2-111 9-149 (215)
303 2xqy_G A13-D6.3 monoclonal ant 99.4 2.4E-11 8.2E-16 73.0 11.0 110 2-111 15-156 (261)
304 1ry7_B FGFR-3, fibroblast grow 99.3 1.5E-12 5.2E-17 80.2 5.8 86 3-88 232-330 (334)
305 4fqp_A Poliovirus receptor; im 99.3 4E-11 1.4E-15 73.4 12.0 110 2-111 9-144 (313)
306 4frw_A Poliovirus receptor-rel 99.3 5.3E-12 1.8E-16 73.0 7.7 81 3-83 128-209 (218)
307 4i0k_A CD276 antigen; immunogl 99.3 1.6E-12 5.3E-17 75.9 5.4 111 2-113 4-140 (222)
308 1ypz_E T cell receptor delta, 99.3 4.3E-11 1.5E-15 69.5 11.4 69 2-71 10-93 (207)
309 2qsq_A Carcinoembryonic antige 99.3 9.7E-12 3.3E-16 65.5 7.8 79 3-84 10-108 (111)
310 1dn0_B IGM-kappa cold agglutin 99.3 1.7E-10 5.7E-15 68.1 13.9 112 2-113 9-155 (232)
311 3ojm_B Fibroblast growth facto 99.3 9.7E-12 3.3E-16 72.7 8.6 84 3-86 128-222 (231)
312 1igt_B IGG2A intact antibody - 99.3 1.1E-11 3.6E-16 79.3 9.2 109 5-113 252-375 (444)
313 1rhf_A Tyrosine-protein kinase 99.3 2.7E-11 9.2E-16 68.6 10.1 72 3-83 108-181 (182)
314 3o3u_N Maltose-binding peripla 99.3 4.4E-12 1.5E-16 83.4 7.6 106 3-111 376-499 (581)
315 4gos_A V-SET domain-containing 99.3 2.1E-11 7.2E-16 65.5 9.0 82 3-84 15-119 (125)
316 3qib_D 2B4 beta chain; IG doma 99.3 4.2E-11 1.4E-15 71.9 11.1 111 2-113 36-178 (270)
317 4fom_A Poliovirus receptor-rel 99.3 1.3E-12 4.3E-17 79.8 4.2 79 4-87 223-302 (308)
318 1bec_A 14.3.D T cell antigen r 99.3 1.8E-10 6.1E-15 68.1 13.3 111 2-113 8-150 (238)
319 3bp6_B Programmed cell death 1 99.3 1E-11 3.5E-16 71.5 7.6 79 4-84 114-192 (202)
320 3udw_C Poliovirus receptor; PV 99.3 1.5E-11 5.2E-16 65.0 7.7 82 3-84 10-115 (118)
321 2w59_A IGY FCU3-4; immunoglobu 99.3 1.3E-11 4.5E-16 72.8 8.1 109 5-113 25-147 (231)
322 2q20_A VK1 O18/O8 germline lig 99.3 3.7E-11 1.3E-15 63.0 9.1 70 2-71 12-95 (109)
323 1qfw_M FV, antibody (anti beta 99.3 3E-11 1E-15 63.3 8.7 70 2-71 10-93 (108)
324 1i1c_A IGG2A, IG gamma-2A chai 99.3 2.3E-11 7.8E-16 72.2 9.1 109 5-113 29-152 (239)
325 3zyi_A Leucine-rich repeat-con 99.3 5.2E-12 1.8E-16 81.1 6.7 79 2-85 361-443 (452)
326 3v2a_R Vascular endothelial gr 99.3 3.8E-11 1.3E-15 81.1 11.0 111 3-113 234-359 (772)
327 3sbw_C Programmed cell death 1 99.3 5.1E-11 1.7E-15 69.4 10.2 84 4-87 127-213 (222)
328 1ypz_F T-cell receptor gamma c 99.3 5.3E-11 1.8E-15 70.1 10.3 121 2-123 10-168 (230)
329 1zox_A CLM-1; IG-superfamily, 99.3 9.9E-11 3.4E-15 61.7 10.4 85 2-86 10-111 (113)
330 4i0k_A CD276 antigen; immunogl 99.3 2.8E-11 9.6E-16 70.5 8.9 82 4-85 121-206 (222)
331 1i8k_A Epidermal growth factor 99.3 5.3E-11 1.8E-15 62.2 9.1 70 2-71 10-93 (107)
332 3bn9_D E2 FAB heavy chain; ant 99.3 3.1E-11 1.1E-15 72.4 9.2 112 2-113 9-162 (257)
333 1sy6_A T-cell surface glycopro 99.3 2.6E-11 9E-16 70.3 8.4 55 6-70 16-70 (204)
334 3r08_E T-cell surface glycopro 99.3 1.3E-12 4.3E-17 65.0 2.4 57 3-70 9-66 (82)
335 1mqk_L Antibody 7E2 FV fragmen 99.3 6E-11 2.1E-15 63.3 8.9 70 2-71 10-93 (120)
336 3to4_D NKT vbeta2 (mouse varia 99.3 7.1E-11 2.4E-15 70.4 10.2 120 2-123 10-162 (253)
337 1ugn_A LIR1, leukocyte immunog 99.3 5.2E-11 1.8E-15 68.5 9.3 70 3-73 110-181 (198)
338 1eaj_A Coxsackie virus and ade 99.3 2.9E-11 9.9E-16 64.5 7.7 82 3-84 15-124 (126)
339 3sgj_C Human FCG3A receptor; r 99.3 6.1E-12 2.1E-16 72.9 5.3 73 4-84 99-173 (204)
340 2e27_L Anti-ciguatoxin antibod 99.3 6.3E-11 2.1E-15 63.1 8.9 70 2-71 12-95 (119)
341 3ry4_A Low affinity immunoglob 99.3 1.5E-11 5.3E-16 68.9 6.7 72 3-82 95-168 (170)
342 1l6x_A Immunoglobulin gamma-1 99.3 1.1E-10 3.6E-15 67.7 10.5 108 6-113 16-138 (207)
343 1iga_A IGA1; immunoglobulin; N 99.3 2.6E-10 8.8E-15 73.6 13.2 112 2-113 10-155 (475)
344 1hzh_H IGG, immunoglobulin hea 99.3 1.6E-10 5.4E-15 74.2 11.9 112 2-113 9-161 (457)
345 3v2a_R Vascular endothelial gr 99.3 4.3E-13 1.5E-17 90.5 0.0 82 3-86 676-757 (772)
346 1f2q_A High affinity immunoglo 99.3 1.6E-11 5.4E-16 69.4 6.5 73 4-84 96-170 (176)
347 3vh8_G Killer cell immunoglobu 99.3 1.9E-11 6.5E-16 74.9 7.0 104 4-112 34-146 (316)
348 1jbj_A CD3 epsilon and gamma e 99.3 1.1E-11 3.8E-16 70.8 5.5 60 6-75 120-179 (186)
349 4fom_A Poliovirus receptor-rel 99.3 3.9E-11 1.3E-15 73.2 8.2 110 2-111 8-141 (308)
350 2or8_A Hepatitis A virus cellu 99.3 2.7E-11 9.3E-16 64.0 6.6 84 2-85 6-111 (116)
351 2ywz_A NEW antigen receptor va 99.2 1.3E-10 4.4E-15 61.2 9.0 69 2-70 9-87 (111)
352 1igt_B IGG2A intact antibody - 99.2 2E-10 7E-15 73.4 11.6 111 2-112 9-151 (444)
353 2ghw_B Anti-SARS SCFV antibody 99.2 1.2E-10 4E-15 69.1 9.8 69 3-71 145-227 (247)
354 1sy6_A T-cell surface glycopro 99.2 9.7E-12 3.3E-16 72.1 5.0 72 7-83 127-202 (204)
355 1fnl_A Low affinity immunoglob 99.2 2.2E-11 7.5E-16 68.8 6.3 72 4-83 99-172 (175)
356 4f80_A Butyrophilin subfamily 99.2 5.4E-11 1.8E-15 69.7 8.1 82 3-84 128-212 (226)
357 1oga_E TRBC1, T-cell receptor 99.2 2.7E-10 9.1E-15 67.9 11.2 111 2-113 12-152 (252)
358 3mj6_A Junctional adhesion mol 99.2 1.7E-11 5.7E-16 73.4 6.0 90 3-92 128-244 (268)
359 1neu_A Myelin P0 protein; stru 99.2 6E-11 2E-15 63.4 7.6 87 2-88 8-122 (124)
360 2d3v_A Leukocyte immunoglobuli 99.2 8.8E-12 3E-16 71.6 4.4 69 4-73 110-180 (196)
361 1f3r_B FV antibody fragment; I 99.2 4.8E-11 1.6E-15 71.3 7.7 70 3-72 149-232 (257)
362 1i3g_L Antibody FV fragment; a 99.2 1.4E-10 4.7E-15 61.0 8.6 70 2-71 13-96 (111)
363 1hng_A CD2; T lymphocyte adhes 99.2 1.7E-11 5.7E-16 69.5 5.4 64 8-82 110-173 (176)
364 2wqr_A IG epsilon chain C regi 99.2 5.4E-11 1.9E-15 73.2 7.9 109 5-113 125-248 (323)
365 3liz_H 4C3 monoclonal antibody 99.2 2.8E-10 9.7E-15 67.9 10.7 112 2-113 9-153 (253)
366 1dr9_A B7-1 (CD80), T lymphocy 99.2 2.5E-10 8.5E-15 65.6 9.9 77 6-82 119-198 (201)
367 4hwn_A FC receptor-like A; FCR 99.2 1.4E-10 4.9E-15 60.7 8.0 62 4-73 18-84 (108)
368 1nbq_A JAM, junctional adhesio 99.2 2.8E-12 9.6E-17 74.0 1.4 72 4-75 118-197 (209)
369 2wqr_A IG epsilon chain C regi 99.2 7.4E-11 2.5E-15 72.6 7.7 105 9-113 25-142 (323)
370 1j05_L T84.66 antibody, anti-C 99.2 1.7E-10 5.8E-15 60.6 8.0 70 2-71 10-97 (111)
371 3umt_A SCFV heavy chain and li 99.2 1.6E-10 5.6E-15 68.9 8.7 70 3-72 148-231 (256)
372 2oyp_A Hepatitis A virus cellu 99.2 7.8E-11 2.7E-15 61.5 6.5 81 2-82 3-105 (109)
373 1hxm_A Gamma-delta T-cell rece 99.2 9.7E-10 3.3E-14 64.8 11.7 70 2-71 10-97 (229)
374 2p1y_A Bispecific alpha/beta T 99.2 8.8E-11 3E-15 69.2 7.3 69 3-71 137-221 (238)
375 3r0n_A Poliovirus receptor-rel 99.2 2E-10 6.9E-15 61.7 8.1 81 2-82 11-127 (128)
376 3p2t_A Leukocyte immunoglobuli 99.2 8.3E-11 2.8E-15 67.5 6.9 69 4-73 110-179 (196)
377 1h5b_A Murine T cell receptor 99.2 2.7E-10 9.2E-15 60.0 8.4 71 2-73 10-95 (113)
378 1nqb_A Single-chain antibody f 99.2 2.8E-10 9.7E-15 68.0 9.4 69 3-71 131-218 (256)
379 2coq_A NEW antigen receptor va 99.2 2E-10 6.7E-15 60.1 7.7 69 2-70 9-87 (108)
380 4dkd_C Macrophage colony-stimu 99.2 2.8E-10 9.6E-15 68.7 9.4 81 4-84 197-280 (292)
381 2q87_A CMRF35-H antigen; all-b 99.2 3.7E-10 1.3E-14 59.2 8.7 83 2-84 5-107 (110)
382 1xau_A B- and T-lymphocyte att 99.2 9.9E-10 3.4E-14 56.8 9.7 81 3-83 24-114 (122)
383 1xt5_A Variable region-contain 99.2 1.4E-10 4.9E-15 62.8 7.2 81 2-83 13-131 (135)
384 1iga_A IGA1; immunoglobulin; N 99.2 3.4E-10 1.2E-14 73.0 9.7 107 5-113 259-379 (475)
385 1uct_A Immunoglobulin alpha FC 99.2 8.8E-11 3E-15 68.7 6.4 64 4-71 116-179 (218)
386 2oz4_A Intercellular adhesion 99.2 6.9E-11 2.4E-15 70.8 5.8 99 3-113 108-214 (265)
387 2bnu_A TCR alpha chain, T-cell 99.2 8.5E-10 2.9E-14 63.9 10.2 109 2-112 9-142 (203)
388 2vsd_A CHIR AB1; immune system 99.1 3.1E-10 1.1E-14 59.1 7.5 64 4-71 15-78 (105)
389 1igy_B IGG1 intact antibody MA 99.1 2.8E-11 9.5E-16 77.2 4.1 112 2-113 8-148 (434)
390 1pew_A JTO2, A lambda-6 type i 99.1 2.2E-10 7.7E-15 60.0 6.9 70 2-71 9-94 (109)
391 2or7_A T-cell immunoglobulin a 99.1 2.7E-10 9.1E-15 60.2 7.2 85 2-86 6-111 (115)
392 3tv3_H PGT128 heavy chain, IG 99.1 1.4E-09 4.8E-14 64.4 11.0 112 2-113 9-169 (239)
393 1eeq_A Kappa-4 immunoglobulin 99.1 4.9E-10 1.7E-14 59.1 8.1 70 2-71 10-99 (114)
394 2yc1_B Single chain antibody f 99.1 5.7E-10 2E-14 61.5 8.5 70 2-71 25-108 (146)
395 3uzq_A Anti-dengue MAB 4E11; d 99.1 1.9E-10 6.6E-15 68.5 7.1 70 3-72 143-230 (253)
396 2gi7_A GPVI protein; IG-like d 99.1 1.4E-10 4.7E-15 66.0 6.2 64 4-72 104-167 (184)
397 3u2s_H PG9 heavy chain; greek 99.1 1.2E-09 4E-14 65.2 10.4 70 2-71 8-100 (248)
398 1oll_A NK receptor; immune sys 99.1 1.7E-10 5.7E-15 65.9 6.6 63 4-71 109-171 (188)
399 1sq2_N Novel antigen receptor; 99.1 6.9E-10 2.4E-14 58.5 8.4 69 2-70 9-87 (113)
400 1za6_B IGG heavy chain; immuno 99.1 1.8E-10 6.3E-15 71.4 7.2 70 5-75 132-207 (344)
401 3rrq_A Protein PD-1, programme 99.1 4E-10 1.4E-14 60.8 7.5 73 2-74 10-100 (129)
402 1kgc_D T-cell receptor alpha c 99.1 3.6E-09 1.2E-13 61.5 11.9 109 2-113 8-142 (206)
403 1ncn_A T lymphocyte activation 99.1 1.8E-10 6.2E-15 60.4 5.8 77 2-80 3-100 (110)
404 2pet_A Lutheran blood group gl 99.1 3.6E-10 1.2E-14 66.1 7.7 68 4-71 129-211 (231)
405 3moq_A NEW antigen receptor va 99.1 1.4E-09 4.7E-14 58.5 9.3 70 2-71 9-88 (126)
406 4gjt_B Poliovirus receptor-rel 99.1 6.8E-10 2.3E-14 59.4 8.1 84 2-85 9-117 (123)
407 1mq8_A ICAM-1, intercellular a 99.1 4.8E-11 1.7E-15 72.7 4.0 116 5-123 98-227 (291)
408 1qok_A MFE-23 recombinant anti 99.1 4.9E-10 1.7E-14 67.8 8.0 68 3-71 172-253 (282)
409 3n9g_H FAB fragment of MAB CR4 99.1 5E-09 1.7E-13 61.6 12.1 119 2-121 9-164 (230)
410 1dlf_L Anti-dansyl immunoglobu 99.1 1.5E-09 5E-14 57.2 8.8 70 2-71 10-98 (113)
411 4ffy_L DENV1-E111 single chain 99.1 4.2E-10 1.4E-14 60.5 6.7 70 2-71 10-97 (126)
412 3juy_B 3B3 single chain varian 99.1 5.9E-10 2E-14 66.5 7.9 69 3-71 159-242 (256)
413 3qhz_H Human monoclonal antibo 99.1 3.7E-09 1.3E-13 62.2 11.2 112 2-113 9-161 (232)
414 3iu4_H CHP3 FAB heavy chain; a 99.1 5.5E-09 1.9E-13 62.8 12.1 119 2-121 9-163 (263)
415 3u6r_L Antibody 1:7 (light cha 99.1 2.8E-09 9.6E-14 58.5 9.9 70 2-71 9-92 (143)
416 3gkz_A Anti-methamphetamine si 99.1 6.1E-10 2.1E-14 66.4 7.9 69 3-71 151-234 (257)
417 2if7_A SLAM family member 6; N 99.1 1.5E-09 5.2E-14 62.2 9.2 63 7-80 122-187 (193)
418 2eys_A NKT15; natural killer T 99.1 4.1E-09 1.4E-13 61.4 11.1 111 2-114 12-147 (210)
419 1zvo_C Myeloma immunoglobulin 99.1 2.5E-09 8.5E-14 69.8 11.0 117 5-123 309-439 (512)
420 2ptt_A CD48 antigen; CD244, CD 99.1 4.9E-10 1.7E-14 58.7 6.1 80 2-84 12-107 (110)
421 2ak4_D SB27 T cell receptor al 99.1 4.2E-09 1.4E-13 61.4 10.5 110 2-113 12-147 (211)
422 2d9c_A Signal-regulatory prote 99.1 1.7E-09 5.8E-14 58.8 8.4 71 2-72 17-102 (136)
423 3f8u_B Tapasin; endoplasmic re 99.1 7.7E-09 2.6E-13 65.4 12.2 120 2-121 167-330 (401)
424 2aty_A Complement receptor chi 99.1 2.8E-09 9.7E-14 67.1 10.3 118 5-123 180-312 (376)
425 3mj8_L Stimulatory hamster ant 99.1 3.8E-10 1.3E-14 65.4 5.9 73 7-79 128-207 (213)
426 1igy_B IGG1 intact antibody MA 99.1 1.1E-09 3.7E-14 69.9 8.3 107 5-112 131-258 (434)
427 1lp9_E T-cell receptor alpha c 99.1 3.1E-09 1.1E-13 61.2 9.4 69 2-70 10-94 (194)
428 3mlr_H Human monoclonal anti-H 99.0 7.8E-09 2.7E-13 60.7 11.3 119 2-121 9-165 (226)
429 2nw2_A ELS4 TCR alpha chain; T 99.0 5.9E-09 2E-13 60.3 10.5 111 2-114 8-141 (200)
430 1hzh_H IGG, immunoglobulin hea 99.0 4E-09 1.4E-13 67.7 10.7 109 5-113 261-384 (457)
431 3auv_A SC-DSFV derived from th 99.0 3E-09 1E-13 64.1 9.6 69 3-71 144-235 (276)
432 1zvo_C Myeloma immunoglobulin 99.0 9.8E-09 3.3E-13 67.0 12.5 112 2-113 9-164 (512)
433 3kg5_A B-cell antigen receptor 99.0 6.3E-09 2.2E-13 56.5 9.8 68 3-71 28-102 (134)
434 2otu_A FV light chain variable 99.0 6.6E-09 2.3E-13 54.8 9.7 70 2-71 10-98 (115)
435 1u3h_A T-cell receptor alpha-c 98.6 2.2E-11 7.4E-16 64.0 0.0 70 2-71 8-93 (110)
436 1nko_A Sialic acid binding IG- 99.0 2.3E-09 7.9E-14 57.9 8.0 70 2-71 15-110 (132)
437 1oga_D T-cell receptor alpha c 99.0 9.5E-09 3.3E-13 60.1 11.1 109 2-113 10-140 (215)
438 1tvd_A T cell receptor, ES204 99.0 2.9E-09 9.8E-14 56.3 8.2 70 2-71 9-98 (116)
439 1vca_A VCAM-D1,2, human vascul 99.0 1.2E-09 4E-14 63.2 7.2 71 4-74 102-179 (202)
440 1p6f_A NKP46, natural cytotoxi 99.0 1.7E-09 5.7E-14 64.3 7.9 63 4-71 112-174 (242)
441 2zg1_A Sialic acid-binding IG- 99.0 1E-09 3.6E-14 63.5 6.9 64 5-74 135-202 (214)
442 1nkr_A P58-CL42 KIR; inhibitor 99.0 1.4E-09 4.7E-14 62.7 7.3 65 4-71 118-183 (201)
443 3esu_F Antibody 14B7* light ch 99.0 1.3E-09 4.4E-14 64.7 7.3 68 3-70 141-231 (250)
444 3ux9_B SCFV antibody; five hel 99.0 3E-09 1E-13 63.4 8.7 69 3-71 144-235 (256)
445 2qhl_A Novel immune-type recep 99.0 1.2E-09 4E-14 57.4 6.2 70 2-71 8-98 (111)
446 3d9a_L Light chain of hyhel10 99.0 5.5E-10 1.9E-14 64.7 5.4 69 7-75 126-203 (213)
447 1iam_A ICAM-1, CD54, intercell 99.0 2.9E-08 1E-12 56.7 12.3 113 2-123 8-125 (185)
448 3sob_H Antibody heavy chain, l 99.0 3.1E-08 1.1E-12 59.1 13.0 111 3-113 33-183 (256)
449 3mbe_C I-AG7; T cell receptor, 99.0 8.8E-09 3E-13 60.7 10.3 110 3-115 11-142 (229)
450 1fo0_B Protein (BM3.3 T cell r 99.0 5.1E-09 1.7E-13 55.1 8.4 69 2-71 10-96 (112)
451 1lk3_L 9D7 light chain; antige 99.0 7.8E-10 2.7E-14 64.0 5.6 68 7-74 125-201 (210)
452 1oaq_L Light chain; antibody, 99.0 3.5E-09 1.2E-13 56.4 7.7 69 3-71 10-95 (120)
453 1q9r_B S25-2 FAB (IGG1K) heavy 99.0 8.6E-10 3E-14 64.4 5.7 74 5-79 139-217 (222)
454 2gki_A Nuclease; anti-DNA anti 99.0 1.3E-09 4.4E-14 66.3 6.6 70 3-72 169-258 (291)
455 2aw2_A B and T lymphocyte atte 99.0 7.7E-09 2.6E-13 52.9 8.3 79 4-83 22-108 (120)
456 2jju_A Signal regulatory prote 99.0 1.8E-09 6.3E-14 58.0 6.5 70 2-71 12-96 (127)
457 3rgv_A YAE62 TCR A chain; TCR, 99.0 1.1E-08 3.6E-13 59.2 10.0 109 2-113 9-139 (200)
458 1q0x_L FAB 9B1, light chain; a 99.0 1.6E-09 5.5E-14 62.7 6.7 70 7-76 129-206 (212)
459 2h32_A Immunoglobulin IOTA cha 99.0 1.4E-09 4.8E-14 58.5 6.0 74 2-75 9-105 (126)
460 3eow_R Poliovirus receptor; im 99.0 8.7E-10 3E-14 64.3 5.5 81 6-86 128-213 (221)
461 2xzc_L FAB A.17 light chain; i 99.0 1.9E-09 6.4E-14 62.7 6.7 70 7-76 128-206 (216)
462 2i24_N NEW antigen receptor PB 99.0 5.4E-09 1.8E-13 55.8 7.9 69 2-70 9-87 (121)
463 2yz1_A Tyrosine-protein phosph 99.0 1.1E-09 3.9E-14 58.2 5.2 70 2-71 16-100 (120)
464 1olz_A Semaphorin 4D; developm 99.0 3.8E-10 1.3E-14 75.5 4.0 102 3-108 543-653 (663)
465 3c6l_A TCR 2W20 alpha chain; T 98.5 5.7E-11 1.9E-15 67.9 0.0 116 2-122 9-145 (185)
466 2edo_A CD48 antigen; beta-sand 99.0 3.9E-10 1.3E-14 60.2 3.3 82 2-85 13-110 (121)
467 4acp_A IG gamma-1 chain C regi 99.0 4.3E-09 1.5E-13 62.5 8.1 118 5-123 36-168 (240)
468 1fo0_A Protein (BM3.3 T cell r 99.0 3.1E-09 1.1E-13 56.2 6.7 69 2-70 9-95 (116)
469 2nms_A CMRF35-like-molecule 1; 99.0 5.6E-08 1.9E-12 52.0 11.7 84 3-86 12-112 (124)
470 2q86_A Valpha14 TCR; INKT cell 99.0 1.2E-08 4.3E-13 60.1 9.9 69 2-70 10-94 (229)
471 2atp_B T-cell surface glycopro 99.0 6.2E-09 2.1E-13 54.9 7.8 69 2-70 7-100 (115)
472 3s96_B 3B5H10 FAB light chain; 99.0 3E-09 1E-13 61.8 6.9 72 7-78 135-213 (218)
473 1moe_A Anti-CEA MAB T84.66; an 98.9 5.7E-09 2E-13 61.5 8.0 68 3-70 129-219 (240)
474 2q7n_A Leukemia inhibitory fac 98.9 1.6E-08 5.4E-13 65.8 10.6 113 2-123 212-329 (488)
475 1p4b_L Antibody variable light 98.9 7.4E-09 2.5E-13 56.3 7.7 69 3-71 15-100 (135)
476 1b6u_A KIR2DL3, P58 killer cel 98.9 3E-09 1E-13 63.8 6.7 78 4-84 117-200 (257)
477 3pv7_A B7-H6, IG-like domain-c 98.9 4.4E-09 1.5E-13 62.3 7.4 78 6-83 131-224 (248)
478 3bp6_A Programmed cell death p 98.9 4.8E-08 1.7E-12 51.7 10.5 70 2-71 8-95 (117)
479 3t0v_A Immunoglobulin variable 98.9 1.4E-08 4.7E-13 54.4 8.3 70 2-71 9-94 (123)
480 3nl4_L Antigen binding fragmen 98.9 7.9E-09 2.7E-13 59.8 8.0 65 5-69 126-198 (213)
481 1svz_A Immunoglobulin;, single 98.9 9.2E-09 3.2E-13 60.9 8.4 68 4-71 138-228 (247)
482 4ei6_A Valpha1 XV19 type II na 98.9 8E-09 2.7E-13 60.0 7.7 68 3-70 12-94 (208)
483 3qjh_A 5C.C7 alpha chain; immu 98.9 1.8E-08 6.1E-13 58.5 9.2 108 3-113 13-141 (205)
484 2znx_A SCFV; fluorotryptohpan, 98.9 2.1E-08 7E-13 59.4 9.7 69 3-71 132-222 (242)
485 1dee_B IGM RF 2A2; FAB-IBP com 98.9 2.8E-08 9.5E-13 58.2 10.2 74 6-79 139-221 (223)
486 3d9a_H Heavy chain of hyhel10 98.9 1.4E-09 4.8E-14 63.0 4.6 72 5-77 130-206 (210)
487 1c1e_H Catalytic antibody 1E9 98.9 1.7E-09 6E-14 62.9 5.0 74 5-79 136-214 (219)
488 2z35_A T-cell receptor alpha-c 98.9 7.9E-09 2.7E-13 54.3 7.0 68 2-69 9-92 (112)
489 3bj9_1 Immunoglobulin IOTA cha 98.9 8E-09 2.7E-13 54.6 7.0 69 3-71 8-99 (116)
490 3tv3_L PGT128 light chain, IG 98.9 4E-09 1.4E-13 61.0 6.1 73 7-79 125-205 (211)
491 2c1o_A IGK-C protein; FAB frag 98.9 2.5E-09 8.7E-14 63.5 5.3 68 7-74 168-244 (254)
492 2hp4_A T-cell surface glycopro 98.9 1.6E-08 5.6E-13 53.3 7.9 70 2-71 9-99 (114)
493 3bik_B Programmed cell death p 98.9 7.8E-08 2.7E-12 52.1 10.6 69 3-71 19-105 (134)
494 3noi_A Natural cytotoxicity tr 98.9 2.5E-09 8.7E-14 56.9 4.4 69 2-70 16-102 (120)
495 1nfd_E H57 FAB; complex (immun 98.9 2.6E-10 8.9E-15 66.1 0.6 69 6-74 126-201 (212)
496 1hnf_A CD2; T lymphocyte adhes 98.9 1.5E-08 5.2E-13 57.7 7.8 64 8-82 115-178 (182)
497 3fku_X Neutralizing antibody F 98.9 1.4E-08 4.8E-13 61.4 8.1 70 3-72 149-234 (280)
498 3bn3_B ICAM-5, intercellular a 98.9 9.5E-08 3.3E-12 55.0 11.0 114 2-123 11-128 (196)
499 1a2y_B IGG1-kappa D1.3 FV (hea 98.9 4.3E-08 1.5E-12 51.8 9.0 70 2-71 9-100 (116)
500 1dn0_B IGM-kappa cold agglutin 98.9 4.5E-08 1.5E-12 57.6 10.0 77 7-83 139-225 (232)
No 1
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.86 E-value=1.1e-20 Score=99.43 Aligned_cols=84 Identities=25% Similarity=0.464 Sum_probs=75.5
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
++.+.+|+++.|.|.+.|.|.|.+.|++++..+....++.+..++....|.|.++...|.|.|+|.+.|..|.....+.|
T Consensus 22 ~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l 101 (107)
T 3knb_B 22 PVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAV 101 (107)
T ss_dssp CEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred cEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEECCCEEEEEEEE
Confidence 46788999999999999999999999999999988888877777777899999999999999999999999998888888
Q ss_pred EecC
Q psy12132 82 SGIP 85 (126)
Q Consensus 82 ~~~~ 85 (126)
.|..
T Consensus 102 ~V~~ 105 (107)
T 3knb_B 102 TVLE 105 (107)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 7753
No 2
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.86 E-value=1.7e-19 Score=105.31 Aligned_cols=120 Identities=24% Similarity=0.408 Sum_probs=95.4
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccC--CcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLG--GRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQ 80 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 80 (126)
+.+..|+++.|.|.+.+.|.|.+.|++++..+... .++.+........|.|.++...|.|.|+|.+.|..|.....+.
T Consensus 28 ~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 107 (215)
T 3mtr_A 28 VYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFI 107 (215)
T ss_dssp EEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEECSSCEEEEEEE
T ss_pred EEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEEEECCCceEEEEE
Confidence 56788999999999999999999999999887654 4566655555679999999999999999999999998888888
Q ss_pred EEecC--CCCeeccCcceeCCCeeEEEEEE---ccCCcceeEEEEEEEe
Q psy12132 81 LSGIP--NIPVFQKSSRRLGPDGYRLVWQV---DTYSAIIQYLLKFRER 124 (126)
Q Consensus 81 l~~~~--~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~r~~ 124 (126)
+.+.. .+|..... ......+.|+|.. .+..++..|.+.|++.
T Consensus 108 l~v~~~P~~p~~~~~--~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~ 154 (215)
T 3mtr_A 108 LVQADTPSSPSIDQV--EPYSSTAQVQFDEPEATGGVPILKYKAEWRAV 154 (215)
T ss_dssp EEECCCCCCCEEEEE--EEETTEEEEEEECCSCCCSSCEEEEEEEEEET
T ss_pred EEECCCCCCCcceEE--EEecceEEEEEecCCccCCCceEEEEEEEEEC
Confidence 77643 33332222 3456678999985 3557888999999875
No 3
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.83 E-value=5e-19 Score=92.05 Aligned_cols=83 Identities=18% Similarity=0.342 Sum_probs=72.0
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccC--CcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLG--GRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFI 79 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 79 (126)
++.+.+|+++.|.|.+.|.|.|.+.|++++..+... .++.+...+....|.|.++...|.|.|+|.+.|..|...+.+
T Consensus 14 ~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~ 93 (100)
T 3knb_A 14 DISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSATV 93 (100)
T ss_dssp EEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred cEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEEECCCEEEEEE
Confidence 466788999999999999999999999999988644 356666666677999999999999999999999999988888
Q ss_pred EEEec
Q psy12132 80 QLSGI 84 (126)
Q Consensus 80 ~l~~~ 84 (126)
.|.|.
T Consensus 94 ~l~V~ 98 (100)
T 3knb_A 94 NIHIR 98 (100)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88764
No 4
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.80 E-value=3.7e-18 Score=90.64 Aligned_cols=84 Identities=18% Similarity=0.281 Sum_probs=72.6
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
++.+.+|+++.|.|.+.+.|.+.+.|++++..+....++.+........|.|.++...|.|.|+|.+.|..|.....+.|
T Consensus 16 ~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l 95 (114)
T 2cqv_A 16 DQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVENKLGSRQAQVNL 95 (114)
T ss_dssp SEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEECSSCEEECCEEE
T ss_pred CeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEECCCcEEEEEEE
Confidence 45678899999999999999999999999988877677776655556789999999999999999999999988887777
Q ss_pred EecC
Q psy12132 82 SGIP 85 (126)
Q Consensus 82 ~~~~ 85 (126)
.+..
T Consensus 96 ~V~~ 99 (114)
T 2cqv_A 96 TVVD 99 (114)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 7653
No 5
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.79 E-value=8e-18 Score=87.76 Aligned_cols=83 Identities=20% Similarity=0.357 Sum_probs=73.3
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
++.+.+|+++.|.|.+.+.|.|.+.|++++..+....++.+........|.|.++...|.|.|+|.+.|..|.......|
T Consensus 17 ~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l 96 (103)
T 3qp3_A 17 SHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVCTNYKGEASDYATL 96 (103)
T ss_dssp CEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred ceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEEEEeCCCcEEEEEEE
Confidence 45678899999999999999999999999999887777777766667789999999999999999999999988888877
Q ss_pred Eec
Q psy12132 82 SGI 84 (126)
Q Consensus 82 ~~~ 84 (126)
.+.
T Consensus 97 ~V~ 99 (103)
T 3qp3_A 97 DVT 99 (103)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 6
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.78 E-value=1.8e-17 Score=88.47 Aligned_cols=84 Identities=15% Similarity=0.286 Sum_probs=70.5
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
.+.+.+|+++.|.|.+.+.|.|.+.|++++..+. ..++.+........|.|.++...|.|.|+|.+.|..|...+.+.|
T Consensus 33 ~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~-~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l 111 (118)
T 2e7c_A 33 TYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLD-TSRVHVRTSDFDTVFFVRQAARSDSGEYELSVQIENMKDTATIRI 111 (118)
T ss_dssp CEEEESSSCEEEEEEEEEESCCEEEEEETTEECC-CSSCEEEECSSEEEEEESSCCTTTCEEEEEEEECSSCEECCEEEE
T ss_pred CEEEECCCEEEEEEEEccCCCCEEEEEECCEECC-CCcEEEEECCCeEEEEECCCChhcCEEEEEEEEeCCCeEEEEEEE
Confidence 3567789999999999999999999999998876 345555555555689999999999999999999999988888888
Q ss_pred EecCC
Q psy12132 82 SGIPN 86 (126)
Q Consensus 82 ~~~~~ 86 (126)
.+...
T Consensus 112 ~V~~~ 116 (118)
T 2e7c_A 112 RVVEK 116 (118)
T ss_dssp EEECC
T ss_pred EEEcC
Confidence 77543
No 7
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.78 E-value=2.7e-17 Score=84.91 Aligned_cols=83 Identities=17% Similarity=0.379 Sum_probs=72.7
Q ss_pred ceeccCCccEEEEEEeeec-CCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYAN-PPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQ 80 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~-p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 80 (126)
++.+.+|+++.|.|.+.+. |.|.+.|++++..+....++.+........|.|.++...|.|.|+|.+.|..|.....+.
T Consensus 10 ~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~ 89 (97)
T 2bk8_A 10 HAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGEDSSYAE 89 (97)
T ss_dssp CEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred CEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCCeEeEEEE
Confidence 5678899999999999997 899999999999887777777655556678999999999999999999999998888888
Q ss_pred EEec
Q psy12132 81 LSGI 84 (126)
Q Consensus 81 l~~~ 84 (126)
|.+.
T Consensus 90 l~V~ 93 (97)
T 2bk8_A 90 LFVK 93 (97)
T ss_dssp EEET
T ss_pred EEEE
Confidence 7764
No 8
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.78 E-value=2.1e-17 Score=85.51 Aligned_cols=83 Identities=24% Similarity=0.394 Sum_probs=72.9
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
++.+.+|+++.|.|.+.+.|.|.+.|++++..+....++.+........|.|.++...|.|.|+|.+.|..|.....+.|
T Consensus 15 ~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 94 (99)
T 3puc_A 15 DTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVKNSAGSVSSSCKL 94 (99)
T ss_dssp CEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred cEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEEE
Confidence 45678899999999999999999999999998887778877776667789999999999999999999999988887777
Q ss_pred Eec
Q psy12132 82 SGI 84 (126)
Q Consensus 82 ~~~ 84 (126)
.+.
T Consensus 95 ~V~ 97 (99)
T 3puc_A 95 TIK 97 (99)
T ss_dssp EEE
T ss_pred EEE
Confidence 653
No 9
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.78 E-value=1.1e-17 Score=87.76 Aligned_cols=83 Identities=25% Similarity=0.472 Sum_probs=72.6
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
++.+.+|+++.|.|.+.+.|.+.+.|++++..+....++.+..++....|.|.++...|.|.|+|.+.|..|.....+.|
T Consensus 22 ~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l 101 (107)
T 3irg_B 22 PVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAV 101 (107)
T ss_dssp CEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred cEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEEEcCCCcEEEEEEE
Confidence 35678899999999999999999999999998877777776666666789999999999999999999999988888877
Q ss_pred Eec
Q psy12132 82 SGI 84 (126)
Q Consensus 82 ~~~ 84 (126)
.+.
T Consensus 102 ~V~ 104 (107)
T 3irg_B 102 TVL 104 (107)
T ss_dssp EEE
T ss_pred EEE
Confidence 765
No 10
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.77 E-value=6.1e-17 Score=92.87 Aligned_cols=113 Identities=19% Similarity=0.243 Sum_probs=88.4
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
++.+.+|+++.|.|.+.+.|.+.+.|++++..+....++.....+....|.|.++...|.|.|+|.+.+..+.....+.+
T Consensus 16 ~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l 95 (197)
T 3lcy_A 16 DVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATNEVGEVETSSKL 95 (197)
T ss_dssp CEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred ceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEECCCCceeEEEEE
Confidence 45678899999999999999999999999998877777777777767789999999999999999999988877777666
Q ss_pred EecCCCCeecc-----CcceeCCCeeEEEEEEccCCcc
Q psy12132 82 SGIPNIPVFQK-----SSRRLGPDGYRLVWQVDTYSAI 114 (126)
Q Consensus 82 ~~~~~~~~~~~-----~~~~~~~~~~~l~~~~~~~~~~ 114 (126)
.+...+..... ......++.+.|.|...+.++.
T Consensus 96 ~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p 133 (197)
T 3lcy_A 96 LLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVP 133 (197)
T ss_dssp EEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCC
T ss_pred EEEcCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCC
Confidence 65432222211 1123467889999998776543
No 11
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.76 E-value=1e-17 Score=84.42 Aligned_cols=69 Identities=23% Similarity=0.591 Sum_probs=61.9
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecC
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNN 71 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~ 71 (126)
++.+.+|+++.|.|.+.+ |.|.+.|+|++..+....++.+...+....|.|.++...|.|.|+|.+.+.
T Consensus 5 ~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~ 73 (84)
T 2lu7_A 5 RVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQD 73 (84)
T ss_dssp CEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTTT
T ss_pred EEEEecCCCEEEEEEECC-CCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEECCE
Confidence 578899999999999865 889999999999998888888887777789999999999999999998764
No 12
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.76 E-value=2.8e-16 Score=94.84 Aligned_cols=112 Identities=22% Similarity=0.289 Sum_probs=88.9
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
++.+.+|+++.|.|.+.+.|.+.+.|++++..+....++..........|.|.++...|.|.|+|.+.+..|.....+.|
T Consensus 14 ~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~l 93 (284)
T 2rik_A 14 SVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQL 93 (284)
T ss_dssp CEEEETTCCEEEEEEEESSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred ceEecCCCcEEEEEEEEcCCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEECCceEEEEEEE
Confidence 45678899999999999999999999999998877777666555556799999999999999999999998888778888
Q ss_pred EecCCCCeeccCc---ceeCCCeeEEEEEEccCCc
Q psy12132 82 SGIPNIPVFQKSS---RRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 82 ~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~ 113 (126)
.+...|....... ....++.+.|.|...+.+.
T Consensus 94 ~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~ 128 (284)
T 2rik_A 94 GVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPE 128 (284)
T ss_dssp EEECCCEEEECCCSEEEEETTCCEEEEEEEESSSC
T ss_pred EccCCCcccccCCCceEecCCceEEEEEEEeeeCC
Confidence 7764443332211 2356788999999977644
No 13
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.76 E-value=7.5e-18 Score=92.35 Aligned_cols=83 Identities=16% Similarity=0.300 Sum_probs=69.4
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECC----------------------------EEe-ccCCcEEEEecCCeEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDG----------------------------TAI-TLGGRIDMHVSSEKHSLL 52 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~----------------------------~~~-~~~~~~~~~~~~~~~~l~ 52 (126)
++.+..|+++.|.|.+.|.|.|.+.|++++ ..+ ....++.+...+....|.
T Consensus 27 ~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~s~L~ 106 (139)
T 1gxe_A 27 TIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSIFT 106 (139)
T ss_dssp EEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEEEEE
T ss_pred CEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCEEEEE
Confidence 467889999999999999999999999987 443 233556565555567899
Q ss_pred EecCCCCCCEEEEEEEecCCceeEEEEEEEec
Q psy12132 53 VRHIKDTDFGNYMCQASNNLGSSQQFIQLSGI 84 (126)
Q Consensus 53 i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~~~ 84 (126)
|.++...|.|.|+|.+.|..|...+.+.|.|.
T Consensus 107 I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 107 VEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp CSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred ECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 99999999999999999999999888888764
No 14
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.76 E-value=9.4e-17 Score=83.05 Aligned_cols=83 Identities=20% Similarity=0.305 Sum_probs=69.6
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEE-ecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMH-VSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQ 80 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 80 (126)
++.+..|+++.|.|.+.+.|.|.+.|++++..+....++... .......|.|.++...|.|.|+|.+.|..|.....+.
T Consensus 14 ~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~ 93 (99)
T 1g1c_A 14 SQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAINIAGETSSHAF 93 (99)
T ss_dssp CEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred ceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEECCCcEEEEEE
Confidence 456788999999999999999999999999988766555443 2344568999999999999999999999998888877
Q ss_pred EEec
Q psy12132 81 LSGI 84 (126)
Q Consensus 81 l~~~ 84 (126)
|.+.
T Consensus 94 l~V~ 97 (99)
T 1g1c_A 94 LLVQ 97 (99)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7764
No 15
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.75 E-value=3.8e-16 Score=97.94 Aligned_cols=120 Identities=24% Similarity=0.361 Sum_probs=93.1
Q ss_pred eccCCccEEEEEEeeecCCCeeEEEECCEEeccCC--cEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 4 ITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGG--RIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
.+..|+.+.|.|.+.+.|.+.+.|++++..+.... ++.....+....|.|.++...|.|.|+|.+.|..|.....+.+
T Consensus 111 ~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l 190 (389)
T 2jll_A 111 YSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYIL 190 (389)
T ss_dssp EECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEEECSSCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEE
T ss_pred EeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEeccCCEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEE
Confidence 46789999999999999999999999998876543 5666555666789999999999999999999999988777777
Q ss_pred EecC--CCCeeccCcceeCCCeeEEEEEE---ccCCcceeEEEEEEEe
Q psy12132 82 SGIP--NIPVFQKSSRRLGPDGYRLVWQV---DTYSAIIQYLLKFRER 124 (126)
Q Consensus 82 ~~~~--~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~r~~ 124 (126)
.+.. .+|.... ........+.|+|.. .+..++..|.+.|++.
T Consensus 191 ~v~~~P~~P~~~~-~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~ 237 (389)
T 2jll_A 191 ALADVPSSPYGVK-IIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEV 237 (389)
T ss_dssp EECCCCCCCEEEE-EEEECSSCEEEEEECCSCCTTSCEEEEEEEEEET
T ss_pred EecCCCCCCcceE-EeeccCCEEEEEEeCCCCCCCcceEEEEEEEEEC
Confidence 6532 2332222 223456789999986 3446788999999875
No 16
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.75 E-value=3.1e-16 Score=95.53 Aligned_cols=121 Identities=21% Similarity=0.307 Sum_probs=95.5
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEec-CCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRH-IKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
+.+..|+.+.|.|.+.+.|.+.+.|++++..+....++..........|.|.+ +...|.|.|+|.+.|..|.....+.+
T Consensus 114 ~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l 193 (305)
T 2nzi_A 114 VHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVEL 193 (305)
T ss_dssp EEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSSSSCEEEECSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEE
T ss_pred EEecCCCEEEEEEEECCCCCCEEEEEECCEECCCCCcEEEEEcCCceEEEEecCCccCccEEEEEEEEeCCCceeeEEEE
Confidence 45677999999999999999999999999887766677666555667899999 99999999999999999988888777
Q ss_pred Eec--CCCCeeccCcceeCCCeeEEEEEE---ccCCcceeEEEEEEEe
Q psy12132 82 SGI--PNIPVFQKSSRRLGPDGYRLVWQV---DTYSAIIQYLLKFRER 124 (126)
Q Consensus 82 ~~~--~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~r~~ 124 (126)
.+. +.+|.... ......+.+.|+|.. .+..++..|.+.|+..
T Consensus 194 ~v~~~P~~p~~~~-~~~~~~~~v~l~w~~p~~~g~~~i~~y~v~~~~~ 240 (305)
T 2nzi_A 194 DVADVPDPPRGVK-VSDVSRDSVNLTWTEPASDGGSKITNYIVEKCAT 240 (305)
T ss_dssp EEEBCCCCCEEEE-EESCCSSCEEEEEECCSCCSBSCEEEEEEEEEET
T ss_pred EEecCCCCCCCce-eeeccCCEEEEEEcCCccCCCCceeEEEEEEecC
Confidence 764 33333322 223467789999986 3456788999988764
No 17
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.75 E-value=1.8e-17 Score=96.29 Aligned_cols=112 Identities=19% Similarity=0.239 Sum_probs=81.2
Q ss_pred CceeccCCccEEEEEE---eeecCCCeeEEEECCEEec-----------------cCCcEEEEecCCeEEEEEecCCCCC
Q psy12132 1 MHSITAPDMRAEIICN---VYANPPAKVEWFRDGTAIT-----------------LGGRIDMHVSSEKHSLLVRHIKDTD 60 (126)
Q Consensus 1 ~~~~~~~g~~~~l~C~---~~~~p~~~~~w~~~~~~~~-----------------~~~~~~~~~~~~~~~l~i~~~~~~d 60 (126)
+++.+..|+++.|.|. +.+.|.+.+.|+|++..+. ...++..........|.|.+++..|
T Consensus 1 q~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 80 (203)
T 4fa8_A 1 QAVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISH 80 (203)
T ss_dssp -CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGG
T ss_pred CCeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHH
Confidence 4678899999999995 4577899999999652110 1123334444556789999999999
Q ss_pred CEEEEEEEecCCceeEEEEEEEecCCCCeeccC---cceeCCCeeEEEEEEccCCc
Q psy12132 61 FGNYMCQASNNLGSSQQFIQLSGIPNIPVFQKS---SRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 61 ~g~y~C~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~ 113 (126)
.|.|+|.+.|..|.....+.|.+.+ ||.+... .....++.+.|.|.+.|.++
T Consensus 81 ~G~Y~C~a~n~~g~~~~~~~l~V~~-p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~ 135 (203)
T 4fa8_A 81 DGNYLCRMKLGETEVTKQEHLSVVK-PLTLSVHSERSQFPDFSVLTVTCTVNAFPH 135 (203)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEEE-EEEEEEEEEECCSSCSCCEEEEEEEEEESC
T ss_pred CeEEEEEEEcCCCcEEEEEEEEecC-CceeeecceeEEEcCCCEEEEEEEcCCCCC
Confidence 9999999999999888888887753 3333221 22345778999999987654
No 18
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=2.7e-17 Score=85.48 Aligned_cols=79 Identities=13% Similarity=0.240 Sum_probs=66.3
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
++.+.+|+++.|.|.+ .|.+.+.|+|++..+....++.+...+....|.|.++...|.|.|+|.+.|.. ......|
T Consensus 16 ~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~--~~~~a~L 91 (100)
T 2yuz_A 16 DQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDAYN--VTLPAKV 91 (100)
T ss_dssp CEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESSSC--CCEEEEE
T ss_pred ceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcCCC--eeEEEEE
Confidence 4678899999999999 78899999999999988888888777777799999999999999999999983 3344444
Q ss_pred Eec
Q psy12132 82 SGI 84 (126)
Q Consensus 82 ~~~ 84 (126)
.|.
T Consensus 92 ~V~ 94 (100)
T 2yuz_A 92 HVI 94 (100)
T ss_dssp EEE
T ss_pred EEe
Confidence 443
No 19
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.75 E-value=8.8e-17 Score=83.21 Aligned_cols=83 Identities=18% Similarity=0.339 Sum_probs=70.5
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEec--cCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAIT--LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFI 79 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~--~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 79 (126)
.+.+.+|+++.|.|.+.+.|.|.+.|++++..+. ...++.+........|.|.++...|.|.|+|.+.|..|.....+
T Consensus 14 ~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~ 93 (100)
T 3irg_A 14 DISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSATV 93 (100)
T ss_dssp EEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred cEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEEEEEeCCCcEEEEE
Confidence 3567889999999999999999999999998875 34566666666667899999999999999999999999888877
Q ss_pred EEEec
Q psy12132 80 QLSGI 84 (126)
Q Consensus 80 ~l~~~ 84 (126)
.|.+.
T Consensus 94 ~l~V~ 98 (100)
T 3irg_A 94 NIHIR 98 (100)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77653
No 20
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.75 E-value=1e-16 Score=82.89 Aligned_cols=83 Identities=19% Similarity=0.261 Sum_probs=69.1
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCC-cEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGG-RIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQ 80 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~-~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 80 (126)
++.+..|+++.|.|.+.+.|.|.+.|++++..+.... ++.....+....|.|.++...|.|.|+|.+.|..|.....+.
T Consensus 14 ~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~g~~~~~~~ 93 (99)
T 1u2h_A 14 DQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVNEYGARQCEAR 93 (99)
T ss_dssp CEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred ceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEEECCCceeEEEE
Confidence 3567889999999999999999999999998876543 444444555568999999999999999999999998888877
Q ss_pred EEec
Q psy12132 81 LSGI 84 (126)
Q Consensus 81 l~~~ 84 (126)
|.+.
T Consensus 94 l~V~ 97 (99)
T 1u2h_A 94 LEVR 97 (99)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7763
No 21
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.74 E-value=3e-16 Score=103.06 Aligned_cols=111 Identities=21% Similarity=0.369 Sum_probs=90.4
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLS 82 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~ 82 (126)
+.+.+|+++.|.|.+.|.|.|.+.|++++..+..+.++.+...+....|.|.++...|.|.|+|.+.|..|...+...|.
T Consensus 394 ~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~ 473 (570)
T 3b43_A 394 VETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSIT 473 (570)
T ss_dssp EEECTTCCEEEEEEEESSSSCCCEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEE
T ss_pred eeecCCCEEEEEEEEecCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEE
Confidence 45678999999999999999999999999998877777776666567899999999999999999999999988888887
Q ss_pred ecCCCCeeccCc---ceeCCCeeEEEEEEccCCcc
Q psy12132 83 GIPNIPVFQKSS---RRLGPDGYRLVWQVDTYSAI 114 (126)
Q Consensus 83 ~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~ 114 (126)
+.. +|.+...+ ....++.+.|.|...+.+++
T Consensus 474 v~~-~P~~~~~~~~~~~~~g~~~~l~c~~~g~p~~ 507 (570)
T 3b43_A 474 LKA-PPRFVKKLSDISTVVGEEVQLQATIEGAEPI 507 (570)
T ss_dssp ECC-CCEEEECCCCBCCBTTCCEEEEEEEESCSSC
T ss_pred ecc-CCcccccCCCceecCCCeEEEEEEEecCCCC
Confidence 753 44443322 23467889999999877553
No 22
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.74 E-value=9e-18 Score=88.14 Aligned_cols=83 Identities=19% Similarity=0.353 Sum_probs=72.2
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
++.+.+|+++.|.|.+.+.|.|.+.|++++..+....++.+........|.|.++...|.|.|+|.+.|..|.....+.|
T Consensus 23 ~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l 102 (106)
T 1nct_A 23 SMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVENSEGKQEAEFTL 102 (106)
T ss_dssp CEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEECCBCSSCBCCEEEEE
T ss_pred CEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCEEEEEECcCCchhCEEEEEEEEeCCCeEEEEEEE
Confidence 46788999999999999999999999999988877777777665556799999999999999999999999988888777
Q ss_pred Eec
Q psy12132 82 SGI 84 (126)
Q Consensus 82 ~~~ 84 (126)
.|.
T Consensus 103 ~V~ 105 (106)
T 1nct_A 103 TIQ 105 (106)
T ss_dssp EEC
T ss_pred EEE
Confidence 763
No 23
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.74 E-value=1.5e-16 Score=90.95 Aligned_cols=109 Identities=21% Similarity=0.356 Sum_probs=83.6
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLS 82 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~ 82 (126)
+.+.+|+++.|.|.+.+.|.+.+.|++++..+....++..... ...|.|.++...|.|.|+|.+.+..+.....+.+.
T Consensus 14 ~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~ 91 (192)
T 2va4_A 14 ATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGS--NTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQ 91 (192)
T ss_dssp EETTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEEETT--TTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred EEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEeCC--eeEEEEecCChhcCcEEEEEEEccccccceEEEEE
Confidence 5678899999999999999999999999998877666655432 34799999999999999999999888777777666
Q ss_pred ecCCCCeecc-CcceeCCCeeEEEEEEccCCc
Q psy12132 83 GIPNIPVFQK-SSRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 83 ~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~ 113 (126)
+...|..... ......++.+.|.|...+.++
T Consensus 92 V~~~p~~~~~~~~~~~~g~~v~l~C~~~~~p~ 123 (192)
T 2va4_A 92 VFVQPHIIQLKNETTYENGQVTLVCDAEGEPI 123 (192)
T ss_dssp EEEEEEEEEECCEEECTTSEEEEEEEEEEESC
T ss_pred EEccCcccccCcceEEeCCeEEEEEEecCCCC
Confidence 5433322221 222345788999999977654
No 24
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.74 E-value=1.1e-16 Score=82.89 Aligned_cols=83 Identities=20% Similarity=0.354 Sum_probs=68.1
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEE-EEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRID-MHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQ 80 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 80 (126)
++.+..|+++.|.|.+.+.|.|.+.|++++..+....+.. .........|.|.++...|.|.|+|.+.|..|.....+.
T Consensus 14 ~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~ 93 (100)
T 2kdg_A 14 NMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKNRAGEATFTVQ 93 (100)
T ss_dssp CEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred CEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEEcCCCeEEEEEE
Confidence 3567889999999999999999999999998876554322 223334468999999999999999999999998888888
Q ss_pred EEec
Q psy12132 81 LSGI 84 (126)
Q Consensus 81 l~~~ 84 (126)
|.+.
T Consensus 94 l~V~ 97 (100)
T 2kdg_A 94 LDVL 97 (100)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8764
No 25
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.74 E-value=1.6e-16 Score=84.56 Aligned_cols=85 Identities=21% Similarity=0.380 Sum_probs=70.9
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEecc-CCcEEEEecC-CeEEEEEecCCCCCCEEEEEEEecCCceeEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITL-GGRIDMHVSS-EKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFI 79 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~-~~~~~~~~~~-~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 79 (126)
++.+.+|+++.|.|.+.+.|.+.+.|++++..+.. ..++.+.... ....|.|.++...|.|.|+|.+.|..|.....+
T Consensus 24 ~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~ 103 (116)
T 2kkq_A 24 SKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSAVNEAGVTTCNT 103 (116)
T ss_dssp CEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEEEEEETTEEEEEEE
T ss_pred cEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEEEEEcCCCeEEEEE
Confidence 46788999999999999999999999999988764 4566655443 345899999999999999999999999888888
Q ss_pred EEEecCC
Q psy12132 80 QLSGIPN 86 (126)
Q Consensus 80 ~l~~~~~ 86 (126)
.|.+...
T Consensus 104 ~l~V~~~ 110 (116)
T 2kkq_A 104 RLDVTAR 110 (116)
T ss_dssp EEEEECC
T ss_pred EEEEeCC
Confidence 8877543
No 26
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.74 E-value=5.8e-16 Score=88.47 Aligned_cols=112 Identities=16% Similarity=0.273 Sum_probs=85.7
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEE-CCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCcee-EEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFR-DGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSS-QQFI 79 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~-~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~-~~~~ 79 (126)
++.+.+|+++.|.|.+.+.|. .+.|++ ++..+....++.....+....|.|.++...|.|.|+|.+.+..|.. ...+
T Consensus 11 ~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~ 89 (189)
T 2v44_A 11 KVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATV 89 (189)
T ss_dssp EEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEEE
T ss_pred ceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCCCcEEEEE
Confidence 456789999999999998877 999999 7777766677777776667799999999999999999999987765 5566
Q ss_pred EEEecCCCCeecc--CcceeCCCeeEEEEEEccCCcc
Q psy12132 80 QLSGIPNIPVFQK--SSRRLGPDGYRLVWQVDTYSAI 114 (126)
Q Consensus 80 ~l~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~ 114 (126)
.+.+...+..... ......++.+.|.|...+.++.
T Consensus 90 ~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p 126 (189)
T 2v44_A 90 VLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAP 126 (189)
T ss_dssp EEEEECCCEEESCCCSEEEETTSCEEECCEEECSSCC
T ss_pred EEEEecCCceeecCCcEEEeCCCCEEEEEEECcCCCC
Confidence 6666543332211 2234568889999999876543
No 27
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.74 E-value=4.4e-17 Score=83.50 Aligned_cols=80 Identities=16% Similarity=0.273 Sum_probs=66.1
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECC--EEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDG--TAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFI 79 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~--~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 79 (126)
++.+..|+.+.|.|.+.|.|.|.+.|++++ ..+...... ........|.|.++...|.|.|+|.+.|..|...+.+
T Consensus 11 ~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~--~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~ 88 (93)
T 1wit_A 11 KIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLV--DAKSSTTSIFFPSAKRADSGNYKLKVKNELGEDEAIF 88 (93)
T ss_dssp EEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTTSEE--EEETTEEEEECTTBCGGGCEEEEEEEEETTEEEEEEE
T ss_pred ceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCcEEE--EecCCEEEEEECCCChhcCEEEEEEEEcCCCeEEEEE
Confidence 456788999999999999999999999998 776544322 2333456899999999999999999999999888887
Q ss_pred EEEe
Q psy12132 80 QLSG 83 (126)
Q Consensus 80 ~l~~ 83 (126)
.|.+
T Consensus 89 ~l~V 92 (93)
T 1wit_A 89 EVIV 92 (93)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7765
No 28
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.73 E-value=3.3e-16 Score=102.83 Aligned_cols=113 Identities=18% Similarity=0.332 Sum_probs=88.4
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
++.+..|+++.|.|.+.|.|.+.+.|+|++..+....++.+........|.|.++...|.|.|+|.+.|..|.......+
T Consensus 14 ~~~v~~G~~v~L~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l 93 (570)
T 3b43_A 14 HVEAAIGEPITLQCKVDGTPEIRIAWYKEHTKLRSAPAYKMQFKNNVASLVINKVDHSDVGEYTCKAENSVGAVASSAVL 93 (570)
T ss_dssp CEEECTTSCEEEEEEEESSSSCEEEEECSSSBCCCCSSEEEECCTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred ceEEcCCCEEEEEEEEccCCCCEEEEEECCEEccCCCCEEEEEECCEEEEEEccCChhhCEEEEEEEEeCCceEEEEEEE
Confidence 46678899999999999999999999999988876666666555556789999999999999999999998877766666
Q ss_pred EecC--CCCeeccCc---ceeCCCeeEEEEEEccCCcc
Q psy12132 82 SGIP--NIPVFQKSS---RRLGPDGYRLVWQVDTYSAI 114 (126)
Q Consensus 82 ~~~~--~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~ 114 (126)
.+.. .+|.+.... ....+..+.|.|...+.++.
T Consensus 94 ~v~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~p~~ 131 (570)
T 3b43_A 94 VIKERKLPPSFARKLKDVHETLGFPVAFECRINGSEPL 131 (570)
T ss_dssp EECCCCCCCEESSCCCCEEEETTSCEEEEEEEESSSSC
T ss_pred EECCCCCCCcccccCCCeEecCCCeEEEEEEEccCCCC
Confidence 5532 345444322 23457889999999877653
No 29
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.73 E-value=4e-16 Score=97.85 Aligned_cols=111 Identities=22% Similarity=0.398 Sum_probs=86.0
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEEC--CEEecc-----CCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCce
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRD--GTAITL-----GGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGS 74 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~--~~~~~~-----~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 74 (126)
+..+.+|+++.|.|.+.|.|.+.+.|+++ +..+.. ..++.+........|.|.++...|.|.|+|.+.|..|.
T Consensus 9 ~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 88 (389)
T 2jll_A 9 NETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGG 88 (389)
T ss_dssp CEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCE
T ss_pred ceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEEEEEEeCCCC
Confidence 35677899999999999999999999999 877754 35666655555679999999999999999999999998
Q ss_pred eEEEEEEEecCCCCeeccCcc---eeCCCeeEEEEEEccCCc
Q psy12132 75 SQQFIQLSGIPNIPVFQKSSR---RLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 75 ~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~~~ 113 (126)
....+.|.+.. +|.+..... ...++.+.|.|...+.++
T Consensus 89 ~~~~~~l~V~~-~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~ 129 (389)
T 2jll_A 89 HQKSMYLDIEY-APKFISNQTIYYSWEGNPINISCDVKSNPP 129 (389)
T ss_dssp EEEEEEEEEEE-EEEECCSCCEEEECTTCCEEEEECEEEESC
T ss_pred cceEEEEEEEe-CCEEecCcceEEeccCCEEEEEEEEEecCC
Confidence 88887777653 233322222 246788999998877654
No 30
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.73 E-value=3.6e-16 Score=89.55 Aligned_cols=113 Identities=19% Similarity=0.287 Sum_probs=84.7
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCC--cEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGG--RIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFI 79 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 79 (126)
++.+.+|+++.|.|.+.+.|.+.+.|++++..+.... ++..........|.|.++...|.|.|+|.+.+..+......
T Consensus 14 ~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~ 93 (194)
T 2a38_A 14 SVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKATNGSGQATSTA 93 (194)
T ss_dssp CEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred ceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEEEcCCceEeEEE
Confidence 4567889999999999999999999999988765442 44444445567899999999999999999999888777776
Q ss_pred EEEecC--CCCeeccC---cceeCCCeeEEEEEEccCCcc
Q psy12132 80 QLSGIP--NIPVFQKS---SRRLGPDGYRLVWQVDTYSAI 114 (126)
Q Consensus 80 ~l~~~~--~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~ 114 (126)
.+.+.. .+|.+... .....++.+.|.|...+.++.
T Consensus 94 ~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~ 133 (194)
T 2a38_A 94 ELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTP 133 (194)
T ss_dssp EEEEECCCEEEEEEECCCCEEECTTEEEEEEEEEEEESCC
T ss_pred EEEEccCCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCC
Confidence 666542 33333322 223467789999999776543
No 31
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.72 E-value=2.2e-15 Score=87.59 Aligned_cols=113 Identities=15% Similarity=0.202 Sum_probs=84.6
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEec-cCCcEEEEec-CCeEEEEEecCCC-CCCEEEEEEEecCCce-eEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAIT-LGGRIDMHVS-SEKHSLLVRHIKD-TDFGNYMCQASNNLGS-SQQ 77 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~-~~~~~~~~~~-~~~~~l~i~~~~~-~d~g~y~C~~~~~~~~-~~~ 77 (126)
++.+.+|+++.|.|.+.+.|.+.+.|++++..+. ...++..... .+...|.|.++.. .|.|.|+|.+.+..|. ...
T Consensus 15 ~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~~~n~~g~~~~~ 94 (212)
T 2yd1_A 15 NQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVAENGVGDAVSA 94 (212)
T ss_dssp CEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEEEECSSSCEEEE
T ss_pred ceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEEEEeCCCCeEEe
Confidence 4567889999999999999999999999998876 4456655433 3346899999999 9999999999998877 566
Q ss_pred EEEEEecCCC------CeeccCc---ceeCCCeeEEEEEEccCCcc
Q psy12132 78 FIQLSGIPNI------PVFQKSS---RRLGPDGYRLVWQVDTYSAI 114 (126)
Q Consensus 78 ~~~l~~~~~~------~~~~~~~---~~~~~~~~~l~~~~~~~~~~ 114 (126)
.+.|.+...+ |.+...+ ....++.+.|.|...+.++.
T Consensus 95 ~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p 140 (212)
T 2yd1_A 95 DATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTP 140 (212)
T ss_dssp EEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCC
T ss_pred eEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCC
Confidence 6666654321 3333222 23458889999999776553
No 32
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.72 E-value=1.1e-16 Score=82.11 Aligned_cols=69 Identities=16% Similarity=0.181 Sum_probs=60.6
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecC
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNN 71 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~ 71 (126)
++.+.+|+++.|.|.+.+ +.+.+.|+|++..+....++.+...+....|.|.++...|.|.|+|.+.|.
T Consensus 14 ~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n~ 82 (93)
T 1waa_A 14 GVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAANT 82 (93)
T ss_dssp CEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETTE
T ss_pred ceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEECCC
Confidence 467889999999999975 568899999999998878888777776779999999999999999999884
No 33
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.72 E-value=2.3e-15 Score=90.83 Aligned_cols=110 Identities=22% Similarity=0.316 Sum_probs=87.3
Q ss_pred eccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEEEe
Q psy12132 4 ITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSG 83 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~~ 83 (126)
.+..|+.+.|.|.+.+.|.+.+.|++++..+....++..........|.|.++...|.|.|+|.+.+..|.....+.|.+
T Consensus 110 ~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 189 (284)
T 2rik_A 110 IVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKV 189 (284)
T ss_dssp EEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEECCCCcccCEEEEEEEEcCCCceeEEEEEEE
Confidence 46789999999999999999999999999887766666655556678999999999999999999999888888888877
Q ss_pred cCCCCeecc--CcceeCCCeeEEEEEEccCCc
Q psy12132 84 IPNIPVFQK--SSRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 84 ~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~ 113 (126)
...|..... ......+..+.|.|...+.++
T Consensus 190 ~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~ 221 (284)
T 2rik_A 190 KEPPVFRKKPHPVETLKGADVHLECELQGTPP 221 (284)
T ss_dssp ECCCBCCSCCCCEEECTTCCEEEEEECBSSSC
T ss_pred ecCCcceeCCCcceecCCCeEEEEEEEEecCC
Confidence 543322221 122346778999999987765
No 34
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.72 E-value=3.2e-15 Score=85.80 Aligned_cols=112 Identities=16% Similarity=0.260 Sum_probs=80.8
Q ss_pred ceeccCCccEEEEEEee-ecCCCeeEEEECCEEeccCC--cEEEEecCC-------eEEEEEecCCCCCCEEEEEEEecC
Q psy12132 2 HSITAPDMRAEIICNVY-ANPPAKVEWFRDGTAITLGG--RIDMHVSSE-------KHSLLVRHIKDTDFGNYMCQASNN 71 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~-~~p~~~~~w~~~~~~~~~~~--~~~~~~~~~-------~~~l~i~~~~~~d~g~y~C~~~~~ 71 (126)
++.+.+|+++.|.|.+. +.|.+.+.|++++..+.... ++.+..... ...|.|.++...|.|.|+|.+.+.
T Consensus 11 ~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 90 (195)
T 2c5d_C 11 NITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTGQYQCLVFLG 90 (195)
T ss_dssp CEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCEEEEEEEEET
T ss_pred heEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCcEEEEEEEeC
Confidence 46788999999999998 99999999999998876542 333322221 458999999999999999999997
Q ss_pred CceeEE-EEEEEecCCCCeeccC---cceeCCCeeEEEEEEccCCcc
Q psy12132 72 LGSSQQ-FIQLSGIPNIPVFQKS---SRRLGPDGYRLVWQVDTYSAI 114 (126)
Q Consensus 72 ~~~~~~-~~~l~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~ 114 (126)
.+.... .+.|.+... |.+... .....++.+.|.|...+.++.
T Consensus 91 ~~~~~~~~~~l~V~~~-p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p 136 (195)
T 2c5d_C 91 HQTFVSQPGYVGLEGL-PYFLEEPEDRTVAANTPFNLSCQAQGPPEP 136 (195)
T ss_dssp TEEEECCCEEEEECCS-CEEEECCCCEEECTTCCEEEEEEEECSSCC
T ss_pred CCceecccEEEEEecC-CeEEcCCCcEEEcCCCEEEEEeECCCCCCC
Confidence 665432 255555433 333322 223467889999999877554
No 35
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.72 E-value=3.2e-16 Score=84.14 Aligned_cols=80 Identities=19% Similarity=0.230 Sum_probs=65.4
Q ss_pred CCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEe-c------CCeEEEEEecCCCCCCEEEEEEEecCCceeEEEE
Q psy12132 7 PDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHV-S------SEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFI 79 (126)
Q Consensus 7 ~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~-~------~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 79 (126)
.+..+.|.|.+.|.|.|+++|+|+|..+....+..... . .....|.|.++...|.|.|+|.+.|..|...+.+
T Consensus 14 ~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~t~ 93 (126)
T 1he7_A 14 EMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASI 93 (126)
T ss_dssp CCCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred cCccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEEEE
Confidence 45679999999999999999999999988766543321 1 1235799999999999999999999999999988
Q ss_pred EEEecCC
Q psy12132 80 QLSGIPN 86 (126)
Q Consensus 80 ~l~~~~~ 86 (126)
.+.+...
T Consensus 94 ~l~v~~~ 100 (126)
T 1he7_A 94 MAAFMDN 100 (126)
T ss_dssp EECCCSC
T ss_pred EEEEEcC
Confidence 8876533
No 36
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.72 E-value=3.1e-17 Score=83.81 Aligned_cols=68 Identities=18% Similarity=0.382 Sum_probs=59.8
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecC
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNN 71 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~ 71 (126)
+.+.+|+++.|.|.+.+ |.+.+.|+|+|..+....++.+...+....|.|.++...|.|.|+|.+.|.
T Consensus 16 v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 83 (91)
T 2lvc_A 16 VHAITSECVMLACEVDR-EDAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAGDE 83 (91)
T ss_dssp EECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECSSC
T ss_pred EEEECCCcEEEEEEECC-CCcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEcce
Confidence 34568999999999864 888999999999988888888887777789999999999999999998775
No 37
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.71 E-value=1.9e-15 Score=86.42 Aligned_cols=106 Identities=11% Similarity=0.152 Sum_probs=79.8
Q ss_pred eeccC-CccEEEEEEeeecCC--CeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEE
Q psy12132 3 SITAP-DMRAEIICNVYANPP--AKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFI 79 (126)
Q Consensus 3 ~~~~~-g~~~~l~C~~~~~p~--~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 79 (126)
+.+.+ |+++.|.|.+.+.|. +.+.|++++..+....... ....|.|.++...|.|.|+|.+.+. +.....+
T Consensus 12 ~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~~~n~-~~~~~~~ 85 (190)
T 2wv3_A 12 VIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNA-----SNMEYRINKPRAEDSGEYHCVYHFV-SAPKANA 85 (190)
T ss_dssp EECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCC-----SEEEEEESSCCGGGCEEEEEEEEET-TEEEEEE
T ss_pred EEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccceEe-----ccEEEEEecCCcccCEEEEEEEEeC-CcccccE
Confidence 34455 999999999998887 7899999998876543321 3458999999999999999999998 7777777
Q ss_pred EEEecCCCCeecc--CcceeCCCeeEEEEEEccCCcc
Q psy12132 80 QLSGIPNIPVFQK--SSRRLGPDGYRLVWQVDTYSAI 114 (126)
Q Consensus 80 ~l~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~ 114 (126)
.|.+...|..... ......++.+.|.|...+.++.
T Consensus 86 ~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p 122 (190)
T 2wv3_A 86 TIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYPHP 122 (190)
T ss_dssp EEEEECCCEEEEECSEEEEETTSCEEEEEEEECSSCC
T ss_pred EEEEecCCcccccCCcceeeCCCcEEEEEEeCccCCC
Confidence 7777544333222 1224568889999999776553
No 38
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.71 E-value=3.7e-15 Score=86.67 Aligned_cols=113 Identities=16% Similarity=0.232 Sum_probs=83.4
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEE-EecCCeEEEEEecCC-CCCCEEEEEEEecCCceeEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDM-HVSSEKHSLLVRHIK-DTDFGNYMCQASNNLGSSQQFI 79 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~-~~~~~~~~l~i~~~~-~~d~g~y~C~~~~~~~~~~~~~ 79 (126)
++.+.+|+++.|.|.+.+.|.+.+.|++++..+........ ...+....|.|.++. ..|.|.|+|.+.+..|.....+
T Consensus 15 ~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~ 94 (212)
T 2yd6_A 15 DQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNNVGEISVST 94 (212)
T ss_dssp CEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEEEETTEEEEEEE
T ss_pred eeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEEEcCCCcEEEEE
Confidence 45678999999999999999999999999988765432222 222345689999995 9999999999999988877777
Q ss_pred EEEecCC------CCeeccC---cceeCCCeeEEEEEEccCCcc
Q psy12132 80 QLSGIPN------IPVFQKS---SRRLGPDGYRLVWQVDTYSAI 114 (126)
Q Consensus 80 ~l~~~~~------~~~~~~~---~~~~~~~~~~l~~~~~~~~~~ 114 (126)
.|.+... .|.+... .....++.+.|.|...+.++.
T Consensus 95 ~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p 138 (212)
T 2yd6_A 95 RLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDP 138 (212)
T ss_dssp EEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCC
T ss_pred EEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCC
Confidence 7776432 1333221 223457889999999877543
No 39
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=1.1e-16 Score=84.31 Aligned_cols=84 Identities=26% Similarity=0.331 Sum_probs=68.7
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEecc-CCcEEEEec-CCeEEEEEecCCCCCCEEEEEEEecCCceeEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITL-GGRIDMHVS-SEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFI 79 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~-~~~~~~~~~-~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 79 (126)
++.+.+|+++.|.|.+.+.|.+.+.|++++..+.. ..++.+... .....|.|.++...|.|.|+|.+.|..|.....+
T Consensus 17 ~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~ 96 (110)
T 2dm2_A 17 HYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRISCTG 96 (110)
T ss_dssp CEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEEEECTTCCEEECC
T ss_pred CeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEEEEECCCeEEEEE
Confidence 35678899999999999999999999999887764 455655543 2345899999999999999999999999887777
Q ss_pred EEEecC
Q psy12132 80 QLSGIP 85 (126)
Q Consensus 80 ~l~~~~ 85 (126)
.|.+..
T Consensus 97 ~l~V~~ 102 (110)
T 2dm2_A 97 RLMVQA 102 (110)
T ss_dssp CEEEEC
T ss_pred EEEEEC
Confidence 777643
No 40
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.71 E-value=6.2e-16 Score=86.12 Aligned_cols=86 Identities=21% Similarity=0.322 Sum_probs=71.9
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEec-CCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVS-SEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQ 80 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 80 (126)
++.+..|+++.|.|.+.+.|.|.+.|++++..+....++.+... .....|.|.++...|.|.|+|.+.|..|.....+.
T Consensus 50 ~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~ 129 (154)
T 1fhg_A 50 DMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVNSLGEATCTAE 129 (154)
T ss_dssp CEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred cEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCEEEEEEEEECCCeEEEEEE
Confidence 35678899999999999999999999999998877777665532 23468999999999999999999999999888888
Q ss_pred EEecCCC
Q psy12132 81 LSGIPNI 87 (126)
Q Consensus 81 l~~~~~~ 87 (126)
|.+...+
T Consensus 130 l~V~~~p 136 (154)
T 1fhg_A 130 LLVETMG 136 (154)
T ss_dssp EEEECC-
T ss_pred EEEeCcC
Confidence 8775443
No 41
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.71 E-value=5.8e-16 Score=80.80 Aligned_cols=81 Identities=22% Similarity=0.306 Sum_probs=65.0
Q ss_pred cCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEE--EecC---CeEEEEEecCCCCCCEEEEEEEecCCceeEEEEE
Q psy12132 6 APDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDM--HVSS---EKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQ 80 (126)
Q Consensus 6 ~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~--~~~~---~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 80 (126)
..++.+.|.|.+.|.|.|.+.|++++..+....+... ...+ ....|.|.++...|.|.|+|.+.|..|...+.+.
T Consensus 14 ~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~~~ 93 (103)
T 1wwb_X 14 TSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQIS 93 (103)
T ss_dssp CCCCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred eECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEE
Confidence 3467899999999999999999999998876654322 1111 1245999999999999999999999999999998
Q ss_pred EEecCC
Q psy12132 81 LSGIPN 86 (126)
Q Consensus 81 l~~~~~ 86 (126)
|.+...
T Consensus 94 l~V~~~ 99 (103)
T 1wwb_X 94 AHFMGW 99 (103)
T ss_dssp ECCSCC
T ss_pred EEECCC
Confidence 887543
No 42
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.71 E-value=8.1e-17 Score=83.51 Aligned_cols=81 Identities=20% Similarity=0.402 Sum_probs=66.2
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEec-cCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAIT-LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQ 80 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~-~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 80 (126)
++.+..|+++.|.|.+.+.|.+.+.|++++..+. ...++.....+ .|.|.++...|.|.|+|.+.|..|.....+.
T Consensus 17 ~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~---~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 93 (100)
T 2edj_A 17 NQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQG---TLQIKNLRISDTGTYTCVATSSSGETSWSAV 93 (100)
T ss_dssp CEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEECTTC---CEEEESCCTTTCCEEEEEEECSSCCCBCCEE
T ss_pred CEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEEcCCC---EEEEccCCcccCEEEEEEEEcCCCCEEEEEE
Confidence 3567789999999999999999999999988776 33444443333 7999999999999999999999888877777
Q ss_pred EEecC
Q psy12132 81 LSGIP 85 (126)
Q Consensus 81 l~~~~ 85 (126)
|.+..
T Consensus 94 l~V~~ 98 (100)
T 2edj_A 94 LDVTE 98 (100)
T ss_dssp EEEES
T ss_pred EEEec
Confidence 77653
No 43
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.71 E-value=2.7e-16 Score=90.81 Aligned_cols=112 Identities=10% Similarity=0.117 Sum_probs=79.2
Q ss_pred ceeccCCccEEEEEEeeecCC-----CeeEEEE-CCEEeccCCcEEEEecC---CeEEEEEecCCCCCCEEEEEEEecCC
Q psy12132 2 HSITAPDMRAEIICNVYANPP-----AKVEWFR-DGTAITLGGRIDMHVSS---EKHSLLVRHIKDTDFGNYMCQASNNL 72 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~-----~~~~w~~-~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~~~~ 72 (126)
++.+.+|+++.|.|.+.+.|. +.+.|++ ++.......+..+.... ....|.|.++...|.|.|+|.+.+..
T Consensus 11 ~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~ 90 (202)
T 3bp6_B 11 VYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVICGA 90 (202)
T ss_dssp EEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred CEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEEeCC
Confidence 467889999999999988876 7899999 44444444455544321 34689999999999999999999988
Q ss_pred ceeEEEEEEEecCCCCeeccC-cceeCCCeeEEEEEEccCCc
Q psy12132 73 GSSQQFIQLSGIPNIPVFQKS-SRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 73 ~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~ 113 (126)
+.....+.|.+...+...... .....++.+.|.|...+.+.
T Consensus 91 ~~~~~~~~l~V~~~~~~p~~~~~~~~~g~~v~l~C~~~g~P~ 132 (202)
T 3bp6_B 91 AWDYKYLTVKVKASYMRIDTRILEVPGTGEVQLTCQARGYPL 132 (202)
T ss_dssp EEEEEEEEEEEEBCCCCEEEEEEECTTTCCEEEEEEEEEBSC
T ss_pred CcceEEEEEEecCCCCcccEEEEecCCCCeEEEEEEccccCC
Confidence 877777777765432211111 12346788999999977543
No 44
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.71 E-value=4.5e-16 Score=81.14 Aligned_cols=68 Identities=26% Similarity=0.504 Sum_probs=58.9
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCC--cEEEEecCCeEEEEEecCCCCCCEEEEEEEec
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGG--RIDMHVSSEKHSLLVRHIKDTDFGNYMCQASN 70 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~ 70 (126)
++.+.+|+++.|.|.+.+ |.+.+.|++++..+.... ++.+...+....|.|.++...|.|.|+|.+.|
T Consensus 16 ~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n 85 (103)
T 1x44_A 16 DTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTG 85 (103)
T ss_dssp CEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEETT
T ss_pred CEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEEECC
Confidence 456788999999999976 779999999999887666 66777666667899999999999999999988
No 45
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.70 E-value=2.1e-15 Score=87.43 Aligned_cols=115 Identities=10% Similarity=0.100 Sum_probs=80.1
Q ss_pred eccCCccEEEEEEeeecCCCeeEEEECC-EEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEEE
Q psy12132 4 ITAPDMRAEIICNVYANPPAKVEWFRDG-TAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLS 82 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~p~~~~~w~~~~-~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~ 82 (126)
.+.+|+++.|.|.+.|.|.|.+.|++.. ..+ ... ....+....|.|.+++..|.|.|.|.+.|..+.....+.|.
T Consensus 12 ~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~--~~~--~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~l~ 87 (202)
T 1vca_A 12 LAQIGDSVSLTCSTTGCESPFFSWRTQIDSPL--NGK--VTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQVE 87 (202)
T ss_dssp EEETTSCEEEEEEEESCSSCEEEEEETTCCCC--SSE--EEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEE
T ss_pred EEcCCCcEEEEEeecCCCCCeEEEECCCCCCc--cce--EEEcCCccEEEECcCCHHHCEEEEEEEEECCceEeeEEEEE
Confidence 3448999999999999999999998842 211 111 12233445799999999999999999999888777777777
Q ss_pred ecCCCC--eeccCcceeCCCeeEEEEEEccCCcceeEEEEEE
Q psy12132 83 GIPNIP--VFQKSSRRLGPDGYRLVWQVDTYSAIIQYLLKFR 122 (126)
Q Consensus 83 ~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~r 122 (126)
|...|. .+........++.+.|+|.+.+..|.....+.|.
T Consensus 88 V~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~~p~~~~~i~W~ 129 (202)
T 1vca_A 88 IYSFPKDPEIHLSGPLEAGKPITVKCSVADVYPFDRLEIDLL 129 (202)
T ss_dssp EEBCCSCCEEEESSCEETTSCEEEEEEEEEEBSGGGEEEEEE
T ss_pred EEeCCCCCEeCCceEEcCCCCEEEEEEECCcCCCCCeEEEEE
Confidence 653332 2222333567889999999977654332334443
No 46
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.70 E-value=1.6e-15 Score=87.06 Aligned_cols=112 Identities=18% Similarity=0.244 Sum_probs=83.0
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccC-CcEEEEe-cCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLG-GRIDMHV-SSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFI 79 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~-~~~~~~~-~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 79 (126)
++.+.+|+++.|.|.+.+.|.+.+.|++++..+... .++.... .+....|.|.++...|.|.|+|.+.+..|.....+
T Consensus 13 ~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~ 92 (197)
T 2j8h_A 13 NLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSGTA 92 (197)
T ss_dssp CEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEEETTEEEEEEE
T ss_pred ccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEEECCCceeEEE
Confidence 466789999999999999999999999999887643 3554433 34456899999999999999999999888777777
Q ss_pred EEEecCCCC----eecc---CcceeCCCeeEEEEEEccCCc
Q psy12132 80 QLSGIPNIP----VFQK---SSRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 80 ~l~~~~~~~----~~~~---~~~~~~~~~~~l~~~~~~~~~ 113 (126)
.|.+...+. .... ......++.+.|.|...+.++
T Consensus 93 ~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~ 133 (197)
T 2j8h_A 93 SLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPD 133 (197)
T ss_dssp EEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESC
T ss_pred EEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCC
Confidence 666532211 1111 122345788999999977654
No 47
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.69 E-value=4.9e-16 Score=81.07 Aligned_cols=79 Identities=15% Similarity=0.305 Sum_probs=65.2
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLS 82 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~ 82 (126)
+.+.+|+++.|.|.+.+.|.+ +.|++++..+....++.+...+....|.|.++...|.|.|+|.+.|..+ ...+.+.
T Consensus 20 ~~v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~--~~~l~V~ 96 (104)
T 2e6p_A 20 LTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEESELLVVKMDGRKHRLILPEAKVQDSGEFECRTEGVSA--FFGVTVQ 96 (104)
T ss_dssp EEEESSSCEECCEECSSTTCC-CEEEETTEECCCBTTBEEEEETTEEEEEESSCCTTTCEEEEEECSSCCC--CEEEEEE
T ss_pred EEEeCCCcEEEEEEecCCCCc-cEEeeCCEECCCCCCEEEEeCCCEEEEEECCCChhhCEEEEEEECCceE--EEEEEEc
Confidence 567889999999999998888 9999999988777777777666677899999999999999999998743 4444444
Q ss_pred ec
Q psy12132 83 GI 84 (126)
Q Consensus 83 ~~ 84 (126)
..
T Consensus 97 ~~ 98 (104)
T 2e6p_A 97 DP 98 (104)
T ss_dssp CC
T ss_pred CC
Confidence 33
No 48
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.69 E-value=1.6e-16 Score=82.20 Aligned_cols=79 Identities=19% Similarity=0.344 Sum_probs=64.4
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
++.+.+|+++.|.|.+.+.|.|.+.|++++..+....... ......|.|.++...|.|.|+|.+.|..|.....+.|
T Consensus 20 ~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~---~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l 96 (99)
T 2yr3_A 20 DCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARSTC---EAGVAELHIQDALPEDHGTYTCLAENALGQVSCSAWV 96 (99)
T ss_dssp CEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSCCCEE---ETTEEEEEECSCCTTCCBCEEEEEECSSCEEEEECCE
T ss_pred CCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECcccceEe---eCCeEEEEECCCChhhCEEEEEEEEECCCeEEEEEEE
Confidence 4567889999999999999999999999987765443221 2234689999999999999999999999887777666
Q ss_pred Ee
Q psy12132 82 SG 83 (126)
Q Consensus 82 ~~ 83 (126)
.+
T Consensus 97 ~V 98 (99)
T 2yr3_A 97 TV 98 (99)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 49
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.69 E-value=3.8e-15 Score=84.60 Aligned_cols=112 Identities=16% Similarity=0.258 Sum_probs=81.5
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCC--eEEEEEecCCCCCCEEEEEEEecCCce-eEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSE--KHSLLVRHIKDTDFGNYMCQASNNLGS-SQQF 78 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~--~~~l~i~~~~~~d~g~y~C~~~~~~~~-~~~~ 78 (126)
++.+.+|+++.|.|.+.+.|.+.+.|++++..+....+........ ...|.|.++...|.|.|+|.+.+..+. ....
T Consensus 11 ~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~ 90 (182)
T 1rhf_A 11 KLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGETEISQP 90 (182)
T ss_dssp EEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESSCTTCEECCC
T ss_pred ceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEcCCCcEEEEE
Confidence 3567889999999999998999999999998876654444333222 358999999999999999999987654 3345
Q ss_pred EEEEecCCCCeeccC---cceeCCCeeEEEEEEccCCcc
Q psy12132 79 IQLSGIPNIPVFQKS---SRRLGPDGYRLVWQVDTYSAI 114 (126)
Q Consensus 79 ~~l~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~ 114 (126)
+.|.+.. +|.+... .....++.+.|.|...+.++.
T Consensus 91 ~~l~V~~-~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p 128 (182)
T 1rhf_A 91 VWLTVEG-VPFFTVEPKDLAVPPNAPFQLSCEAVGPPEP 128 (182)
T ss_dssp EEEEEEC-SCEEEECCCCEEECTTCCEEEEEEEECSSSC
T ss_pred EEEEEec-CCeEEecCcceEecCCCEEEEEeEecCCCCC
Confidence 5555543 3333221 224567889999999877654
No 50
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.69 E-value=2.2e-16 Score=82.85 Aligned_cols=83 Identities=24% Similarity=0.441 Sum_probs=60.7
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
++.+..|+++.|.|.+.+.|.+.+.|++++..+....+...... ...|.|.++...|.|.|+|.+.|..|.....+.|
T Consensus 19 ~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~--~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l 96 (108)
T 3kvq_A 19 NQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDG--NRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFF 96 (108)
T ss_dssp CEEEETTCCEEEECBCC----CCEEEEESSSBCCCBTTEEEETT--TTEEEECSCCGGGCEEEEEEEC----CEEEEEEE
T ss_pred CeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCCCeEEeCC--CcEEEEeecCcccCEEEEEEEEeCCCceEEEEEE
Confidence 35677899999999999999999999999887765555544332 3489999999999999999999999988888888
Q ss_pred EecCC
Q psy12132 82 SGIPN 86 (126)
Q Consensus 82 ~~~~~ 86 (126)
.+...
T Consensus 97 ~V~~~ 101 (108)
T 3kvq_A 97 IIEGA 101 (108)
T ss_dssp EEEC-
T ss_pred EEeCC
Confidence 76533
No 51
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.69 E-value=4.6e-16 Score=79.99 Aligned_cols=77 Identities=21% Similarity=0.436 Sum_probs=64.6
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
++.+.+|+++.|.|.+.+.| +.+.|++++..+....++.+. . ..|.|.++...|.|.|+|.+.|..|.....+.+
T Consensus 18 ~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~-~---~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l 92 (95)
T 2ckn_A 18 SLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVESNRTRIT-G---EEVEVRDSIPADSGLYACVTSSPSGSDTTYFSV 92 (95)
T ss_dssp CEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCCCSSEEEC-S---SEEEESSCCGGGSEEEEEEEEETTEEEEEEEEE
T ss_pred eEEEcCCCeEEEEEECCCCC-CceEEEECCEecCCCCCEEEe-C---CEEEECCCChHHCEEEEEEeccCCCcEEEEEEE
Confidence 45678899999999999887 899999999887766665543 2 389999999999999999999999888777776
Q ss_pred Ee
Q psy12132 82 SG 83 (126)
Q Consensus 82 ~~ 83 (126)
.+
T Consensus 93 ~V 94 (95)
T 2ckn_A 93 NV 94 (95)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 52
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.69 E-value=4.7e-16 Score=80.56 Aligned_cols=80 Identities=19% Similarity=0.409 Sum_probs=66.4
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLS 82 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~ 82 (126)
+.+.+|+++.|.|.+.+.| |.+.|++++..+....++.+. . ..|.|.++...|.|.|+|.+.|..|.....+.+.
T Consensus 13 ~~v~~G~~v~L~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~-~---~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~ 87 (99)
T 2cr3_A 13 FLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAESNRTRIT-G---EEVEVQDSVPADSGLYACVTSSPSGSDTTYFSVN 87 (99)
T ss_dssp CCBCTTSCEEEECCCCSSC-CEEEEEESSSBCCCCSSEEEC-S---SEEEETTCCTTTCEEEEEEEEETTEEEEEEEEEC
T ss_pred eEEeCCCcEEEEEEecCCC-CeEEEEECCEECCCCCcEEEE-C---CEEEEccCCHHHCEEEEEEEEeCCceEEEEEEEE
Confidence 5678899999999999876 799999999877655555543 2 3899999999999999999999999888888887
Q ss_pred ecCCC
Q psy12132 83 GIPNI 87 (126)
Q Consensus 83 ~~~~~ 87 (126)
+...+
T Consensus 88 V~~~~ 92 (99)
T 2cr3_A 88 VSDAL 92 (99)
T ss_dssp BCSCC
T ss_pred EecCC
Confidence 76544
No 53
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.68 E-value=3.5e-16 Score=84.01 Aligned_cols=84 Identities=15% Similarity=0.229 Sum_probs=64.3
Q ss_pred ceeccCCccEEEEEEeeec---CCCeeEEEECCEE-ec--cCCcEEEEecC------CeEEEEEecCCCCCCEEEEEEEe
Q psy12132 2 HSITAPDMRAEIICNVYAN---PPAKVEWFRDGTA-IT--LGGRIDMHVSS------EKHSLLVRHIKDTDFGNYMCQAS 69 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~---p~~~~~w~~~~~~-~~--~~~~~~~~~~~------~~~~l~i~~~~~~d~g~y~C~~~ 69 (126)
++.+.+|+++.|.|.+.+. |.|.+.|+|+... +. ...++.+.... ....|.|.++...|.|.|+|.+.
T Consensus 16 ~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DaG~Y~Cevs 95 (126)
T 2dav_A 16 GGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNYRCEVT 95 (126)
T ss_dssp CCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSCEEEEEEEE
T ss_pred CeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccCEEEEEEEE
Confidence 4678899999999999764 7899999997421 11 12444442110 14689999999999999999999
Q ss_pred cCCceeEEEEEEEecC
Q psy12132 70 NNLGSSQQFIQLSGIP 85 (126)
Q Consensus 70 ~~~~~~~~~~~l~~~~ 85 (126)
|..+...+.+.|.|..
T Consensus 96 n~~g~~~~~~~L~V~~ 111 (126)
T 2dav_A 96 YKDKFDSCSFDLEVHE 111 (126)
T ss_dssp CSSCEEEECCEEEEEC
T ss_pred eCCCcEEEEEEEEEEe
Confidence 9998888888888765
No 54
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.68 E-value=8.5e-15 Score=85.20 Aligned_cols=110 Identities=17% Similarity=0.195 Sum_probs=78.5
Q ss_pred ceeccCCccEEEEEEee-ecCCCeeEEEECCEEeccCCcEEEEecC--CeEEEEEecCCCCCCEEEEEEEecCCceeEEE
Q psy12132 2 HSITAPDMRAEIICNVY-ANPPAKVEWFRDGTAITLGGRIDMHVSS--EKHSLLVRHIKDTDFGNYMCQASNNLGSSQQF 78 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~-~~p~~~~~w~~~~~~~~~~~~~~~~~~~--~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~ 78 (126)
++.+.+|+.+.|.|.+. +.|.|.+.|++++..+..+.++.+..+. +...|.|.++...|.|.|+|.+.|........
T Consensus 11 ~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~Ng~a~~~~~ 90 (207)
T 3rbs_A 11 AVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHST 90 (207)
T ss_dssp EEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEETTEEEEEE
T ss_pred ceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEECCCeEEEEE
Confidence 35678899999999986 4699999999999998777666555443 45689999999999999999999943333332
Q ss_pred EEEEe------------------cCCCCeeccC--cceeCCCeeEEEEEEccC
Q psy12132 79 IQLSG------------------IPNIPVFQKS--SRRLGPDGYRLVWQVDTY 111 (126)
Q Consensus 79 ~~l~~------------------~~~~~~~~~~--~~~~~~~~~~l~~~~~~~ 111 (126)
+.+.. ...+|.+... .....+..+.|.|.+.+.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~v~~g~~v~l~C~v~g~ 143 (207)
T 3rbs_A 91 VVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVANI 143 (207)
T ss_dssp EEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEEEEEEETTTEEEEEEEEESC
T ss_pred EEEEccchhhhcccccccccccccCCCCceEecCCcEEcCCCcEEEEEEEeCC
Confidence 22110 0024443322 234568889999999777
No 55
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.68 E-value=2.8e-15 Score=86.90 Aligned_cols=108 Identities=19% Similarity=0.202 Sum_probs=78.9
Q ss_pred CCccEEEEEEeeec-CCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEEEecC
Q psy12132 7 PDMRAEIICNVYAN-PPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIP 85 (126)
Q Consensus 7 ~g~~~~l~C~~~~~-p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~~~~ 85 (126)
.++.+.|.|.+.+. |.+.+.|++++..+....++.+...+....|.|.++...|.|.|+|.+.+..+.....+.+.+..
T Consensus 16 ~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v~~ 95 (212)
T 2r15_A 16 TAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQA 95 (212)
T ss_dssp CSSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHH
T ss_pred cCceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEEee
Confidence 34455666666553 57899999999998877777776666667899999999999999999999888777777775431
Q ss_pred --------------------CCCeeccC---cceeCCCeeEEEEEEccCCcc
Q psy12132 86 --------------------NIPVFQKS---SRRLGPDGYRLVWQVDTYSAI 114 (126)
Q Consensus 86 --------------------~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~ 114 (126)
.++..... .....++.+.|.|...+.++.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p 147 (212)
T 2r15_A 96 YDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPP 147 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCC
T ss_pred ccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCc
Confidence 22222221 223567889999999876553
No 56
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.68 E-value=4.3e-16 Score=83.07 Aligned_cols=82 Identities=23% Similarity=0.305 Sum_probs=68.4
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEecc-CCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITL-GGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQ 80 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 80 (126)
++.+..|+++.|.|.+.+.|.+.+.|++++..+.. ..++....++ .|.|.++...|.|.|+|.+.|..|.....+.
T Consensus 17 ~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~~~~~---~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~ 93 (118)
T 2eo9_A 17 NQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENG---VLQIRYAKLGDTGRYTCIASTPSGEATWSAY 93 (118)
T ss_dssp CEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEEEETT---EEEEESCCGGGCCCEEEEEECSSCEEEEECC
T ss_pred CEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEEccCC---EEEEccCCcCCCEEEEEEEEcCCCcEEEEEE
Confidence 35678899999999999999999999999887753 4566555555 8999999999999999999999998887777
Q ss_pred EEecCC
Q psy12132 81 LSGIPN 86 (126)
Q Consensus 81 l~~~~~ 86 (126)
|.+...
T Consensus 94 l~V~~~ 99 (118)
T 2eo9_A 94 IEVQEF 99 (118)
T ss_dssp EEEECC
T ss_pred EEEEeC
Confidence 776533
No 57
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.68 E-value=9e-15 Score=83.56 Aligned_cols=113 Identities=13% Similarity=0.212 Sum_probs=82.6
Q ss_pred ceeccCCccEEEEEEeeecC-CCeeEEEE-CCEEec-cCCcEEEEec-CCeEEEEEecCCCCCCEEEEEEEecCC-ceeE
Q psy12132 2 HSITAPDMRAEIICNVYANP-PAKVEWFR-DGTAIT-LGGRIDMHVS-SEKHSLLVRHIKDTDFGNYMCQASNNL-GSSQ 76 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p-~~~~~w~~-~~~~~~-~~~~~~~~~~-~~~~~l~i~~~~~~d~g~y~C~~~~~~-~~~~ 76 (126)
++.+.+|+++.|.|.+.+.+ .+.+.|++ ++..+. ...++..... .....|.|.++...|.|.|+|.+.+.. +...
T Consensus 11 ~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~ 90 (191)
T 1epf_A 11 QGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSE 90 (191)
T ss_dssp SEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTTEEEE
T ss_pred CcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEEEcCCCcceE
Confidence 45678899999999998876 78999999 887765 3455554332 445689999999999999999999887 4556
Q ss_pred EEEEEEecCCCCeecc--CcceeCCCeeEEEEEEccCCcc
Q psy12132 77 QFIQLSGIPNIPVFQK--SSRRLGPDGYRLVWQVDTYSAI 114 (126)
Q Consensus 77 ~~~~l~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~ 114 (126)
..+.+.+...+..... ......++.+.|.|...+.++.
T Consensus 91 ~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~ 130 (191)
T 1epf_A 91 ATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPP 130 (191)
T ss_dssp EEEEEEEECCSEEEECCSSEECCTTSCEEECCEEECSSCC
T ss_pred EEEEEEeecCceEecCCCcEeecCCCeEEEEEEECCCCCC
Confidence 6677766533332222 1223467889999999876553
No 58
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.68 E-value=6.3e-16 Score=80.52 Aligned_cols=78 Identities=22% Similarity=0.385 Sum_probs=64.3
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
++.+.+|+++.|.|.+.+ |.+.+.|++++..+....++.+..++....|.|.++...|.|.|+|.+.|. ...+.|
T Consensus 17 ~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~----~~~~~l 91 (103)
T 2edf_A 17 DQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVEAS----KSTASL 91 (103)
T ss_dssp CEEECTTSCEEECCEESS-SSCCCCEEESSCBCCCSSSEEEEEETTEEEEEESSCCTTTCSEEEEECSSC----EEEEEE
T ss_pred ccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccCCCCEEEEECCCEEEEEECCCCcccCEEEEEEEccC----CcEEEE
Confidence 467789999999999986 788999999998887777887777776778999999999999999999992 344444
Q ss_pred Eec
Q psy12132 82 SGI 84 (126)
Q Consensus 82 ~~~ 84 (126)
.+.
T Consensus 92 ~V~ 94 (103)
T 2edf_A 92 HVE 94 (103)
T ss_dssp EEC
T ss_pred EEe
Confidence 443
No 59
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.67 E-value=6.7e-15 Score=86.36 Aligned_cols=120 Identities=13% Similarity=0.260 Sum_probs=81.8
Q ss_pred ceeccCCccEEEEEEeeecCCC---eeEEEECCEE-----------ecc------CCcEEEEec---CCeEEEEEecCCC
Q psy12132 2 HSITAPDMRAEIICNVYANPPA---KVEWFRDGTA-----------ITL------GGRIDMHVS---SEKHSLLVRHIKD 58 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~---~~~w~~~~~~-----------~~~------~~~~~~~~~---~~~~~l~i~~~~~ 58 (126)
++.+.+|+++.|.|.+.+.+.+ .+.|++++.. +.. ..+...... .+...|.|.+++.
T Consensus 13 pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~ 92 (226)
T 4f80_A 13 PILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVTA 92 (226)
T ss_dssp CEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCCG
T ss_pred CEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCch
Confidence 4678899999999999866554 6899986521 110 112222221 1356899999999
Q ss_pred CCCEEEEEEEecCCceeEEEEEEEecCCCCeeccCcceeCCCeeEEEEEEccCCcceeEEEEEEE
Q psy12132 59 TDFGNYMCQASNNLGSSQQFIQLSGIPNIPVFQKSSRRLGPDGYRLVWQVDTYSAIIQYLLKFRE 123 (126)
Q Consensus 59 ~d~g~y~C~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~r~ 123 (126)
.|.|.|+|.+.|..+.....+.+.+.+.............+..+.+.|.+.+..|.. .+.|.+
T Consensus 93 ~D~G~Y~C~a~n~~~~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p--~i~W~k 155 (226)
T 4f80_A 93 SDSGKYLCYFQDGDFYEKALVELKVAALGSDLHVDVKGYKDGGIHLECRSTGWYPQP--QIQWSN 155 (226)
T ss_dssp GGCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEEEETTEEEEEEEEEEEBSCC--EEEEEC
T ss_pred HHCeeEEEEEECCCcEEEEEEEEeeccceecccceeeeccCCceeeEEEeccCCCCC--EEEEEE
Confidence 999999999999988888777776654444333334445678899999987753333 345544
No 60
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.67 E-value=2.1e-15 Score=77.50 Aligned_cols=66 Identities=24% Similarity=0.392 Sum_probs=58.4
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQA 68 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 68 (126)
++.+.+|+++.|.|.+ +.|.+.+.|++++..+....++.+...+....|.|.++...|.|.|+|.+
T Consensus 17 ~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 82 (95)
T 2k1m_A 17 SVEVAAGSPAVFEAET-ERAGVKVRWQRGGSDISASNKYGLATEGTRHTLTVREVGPADQGSYAVIA 82 (95)
T ss_dssp CEEEETTSCEEEEEEC-SSSSCCCEEECSSSEECSSTTCEEEEETTEEEEEESSCCTTCCSEEEEEE
T ss_pred cEEEeCCCcEEEEEEe-CCCCCeEEEEECCEECCCCCcEEEEEcCCEEEEEEcCCCcccCEEEEEEE
Confidence 4567889999999999 78889999999998887777777777766778999999999999999999
No 61
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.67 E-value=3.6e-16 Score=80.99 Aligned_cols=79 Identities=22% Similarity=0.431 Sum_probs=64.1
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCc---EEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGR---IDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFI 79 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~---~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 79 (126)
+.+.+|+++.|.|.+.+.|.|.+.|++++..+....+ +.... ....|.|.++...|.|.|+|.+.|..|...+.+
T Consensus 18 ~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~--~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~ 95 (100)
T 3caf_A 18 HAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRN--QHWSLIMESVVPSDKGNYTCVVENEYGSINHTY 95 (100)
T ss_dssp EEECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEG--GGTEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred EEecCCCEEEEEEEccccCCCEEEEEECCEEcccccccccEEEec--CeEEEEEccCCcCCCEEEEEEEEeCCCEEEEEE
Confidence 4577899999999999999999999999988764322 22222 224799999999999999999999999888777
Q ss_pred EEEe
Q psy12132 80 QLSG 83 (126)
Q Consensus 80 ~l~~ 83 (126)
.|.+
T Consensus 96 ~l~V 99 (100)
T 3caf_A 96 HLDV 99 (100)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7765
No 62
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.67 E-value=1.1e-14 Score=88.63 Aligned_cols=112 Identities=18% Similarity=0.251 Sum_probs=83.6
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccC-CcEEEEe-cCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLG-GRIDMHV-SSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFI 79 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~-~~~~~~~-~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 79 (126)
++.+.+|+++.|.|.+.+.|.+.+.|++++..+... .++.... .+....|.|.++...|.|.|+|.+.|..|.....+
T Consensus 13 ~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~ 92 (305)
T 2nzi_A 13 NLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSGTA 92 (305)
T ss_dssp CEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEE
T ss_pred ceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEEEcCCCCccceE
Confidence 467889999999999999999999999999887643 3444432 34456899999999999999999999988877777
Q ss_pred EEEecCCCCe----ec---cCcceeCCCeeEEEEEEccCCc
Q psy12132 80 QLSGIPNIPV----FQ---KSSRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 80 ~l~~~~~~~~----~~---~~~~~~~~~~~~l~~~~~~~~~ 113 (126)
.|.+...+.. .. .......++.+.|.|...+.+.
T Consensus 93 ~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~ 133 (305)
T 2nzi_A 93 SLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPD 133 (305)
T ss_dssp EEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESC
T ss_pred EEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCC
Confidence 7776422211 11 1122346788999999877654
No 63
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.66 E-value=1.5e-15 Score=79.70 Aligned_cols=88 Identities=19% Similarity=0.337 Sum_probs=67.8
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
++.+.+|+++.|.|.+.+. |.+.|++++..+....++.+...+....|.|.++...|.|.|+|.+.+ ......|
T Consensus 17 ~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n----~~~~~~l 90 (108)
T 2dm7_A 17 TKEASEGATATLQCELSKV--APVEWKKGPETLRDGGRYSLKQDGTRCELQIHDLSVADAGEYSCMCGQ----ERTSATL 90 (108)
T ss_dssp CCEEETTSCEEEEEEBSSS--CCCEEESSSSBCCSSSSCEEEEETTEEEEEESSCCTTTCSEEEEEETT----EEEEEEC
T ss_pred cEEEeCCCcEEEEEEeCCC--CeeEEEECCEECCCCCCEEEEecCCEEEEEECCCCcccCEEEEEEEcC----CEEEEEE
Confidence 3567889999999999754 789999999888777777777777677899999999999999999955 3445555
Q ss_pred EecCCCCeeccCcc
Q psy12132 82 SGIPNIPVFQKSSR 95 (126)
Q Consensus 82 ~~~~~~~~~~~~~~ 95 (126)
.+...++.+...+.
T Consensus 91 ~V~~~p~~~~~~~~ 104 (108)
T 2dm7_A 91 TVRALPARFTEGSG 104 (108)
T ss_dssp EEECCCSSCCCCCC
T ss_pred EEecCCHHHccCcc
Confidence 55555555554443
No 64
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.66 E-value=4.8e-15 Score=77.86 Aligned_cols=83 Identities=16% Similarity=0.156 Sum_probs=63.4
Q ss_pred ceeccCCccEEEEEEeeecCC---CeeEEEECCEEecc---CCcEEEEec------CCeEEEEEecCCCCCCEEEEEEEe
Q psy12132 2 HSITAPDMRAEIICNVYANPP---AKVEWFRDGTAITL---GGRIDMHVS------SEKHSLLVRHIKDTDFGNYMCQAS 69 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~---~~~~w~~~~~~~~~---~~~~~~~~~------~~~~~l~i~~~~~~d~g~y~C~~~ 69 (126)
++.+..|+++.|.|.+.+.|. |.+.|+|++..... ..++.+... .....|.|.+++..|.|.|+|.+.
T Consensus 13 ~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 92 (108)
T 3cx2_A 13 DGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAFTGSYRCEVS 92 (108)
T ss_dssp CEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGGGCEEEEEEEE
T ss_pred cEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCccCEEEEEEEe
Confidence 466889999999999999988 99999997732211 234433210 113589999999999999999999
Q ss_pred cCCceeEEEEEEEec
Q psy12132 70 NNLGSSQQFIQLSGI 84 (126)
Q Consensus 70 ~~~~~~~~~~~l~~~ 84 (126)
|..|...+.+.|.|.
T Consensus 93 N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 93 TKDKFDCSNFNLTVH 107 (108)
T ss_dssp CSSCEEEEEEEEEEE
T ss_pred cCCCceEEEEEEEEe
Confidence 999999888888764
No 65
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.66 E-value=4.9e-15 Score=78.36 Aligned_cols=81 Identities=20% Similarity=0.375 Sum_probs=65.5
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
++.+.+|+++.|.|.+.+. |.+.|++++..+....++.+..++....|.|.++...|.|.|+|.+ +.......|
T Consensus 28 ~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a----~~~~~~~~l 101 (113)
T 2edh_A 28 NEEATEGATAVLRCELSKM--APVEWWKGHETLRDGDRHSLRQDGARCELQIRGLVAEDAGEYLCMC----GKERTSAML 101 (113)
T ss_dssp CCEECTTSCEEEEEEESSC--CCCEEEESSSBCCCSSSEEEEEETTEEEEEECSCCSTTCEEEEEEE----TTEEEEEEE
T ss_pred ceEEeCCCeEEEEEEECCC--CcEEEEECCEECCCCCcEEEEECCCEEEEEECCCChhhCEEEEEEe----CCCCEEEEE
Confidence 3567889999999999754 7899999998887777888777777778999999999999999999 445566666
Q ss_pred EecCCCC
Q psy12132 82 SGIPNIP 88 (126)
Q Consensus 82 ~~~~~~~ 88 (126)
.+...|.
T Consensus 102 ~V~~~p~ 108 (113)
T 2edh_A 102 TVRAMPS 108 (113)
T ss_dssp EECCCCC
T ss_pred EEeCCCC
Confidence 6654443
No 66
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.66 E-value=2e-16 Score=83.33 Aligned_cols=84 Identities=21% Similarity=0.361 Sum_probs=68.0
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEE-ecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMH-VSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQ 80 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 80 (126)
++.+.+|+++.|.|.+.+.|.+.+.|++++..+......... .......|.|.++...|.|.|+|.+.|..|.....+.
T Consensus 18 ~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~ 97 (110)
T 2dm3_A 18 DLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATNRAGQNSFSLE 97 (110)
T ss_dssp EEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEECSSCEEEECCE
T ss_pred cEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEEECCCCEEEEEEE
Confidence 356788999999999999999999999998877655443332 2233468999999999999999999999998887777
Q ss_pred EEecC
Q psy12132 81 LSGIP 85 (126)
Q Consensus 81 l~~~~ 85 (126)
|.+..
T Consensus 98 l~V~~ 102 (110)
T 2dm3_A 98 LVVAA 102 (110)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 77653
No 67
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.66 E-value=3.6e-15 Score=77.27 Aligned_cols=77 Identities=17% Similarity=0.284 Sum_probs=64.3
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLS 82 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~ 82 (126)
+.+..|+++.|.|.+. .|.+.+.|++++..+....++.+...+....|.|.++...|.|.|+|.+ |.......|.
T Consensus 18 ~~v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a----g~~~~~~~l~ 92 (100)
T 2yuv_A 18 YQVDKGGRVRFVVELA-DPKLEVKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTA----GDEKCSTELF 92 (100)
T ss_dssp EEECTTEEEEEEEEES-CTTSCEEEEESSCBCCCBTTEEEEEETTEEEEEEEEECTTTCCEEEEEE----TTEEEEEEEE
T ss_pred cEEcCCCcEEEEEEec-CCCceEEEEECCEECCCCCCEEEEecCCEEEEEEcCCCcCcCEEEEEEE----CCceEEEEEE
Confidence 4567899999999998 7889999999998887777887777766678999999999999999999 4455566666
Q ss_pred ec
Q psy12132 83 GI 84 (126)
Q Consensus 83 ~~ 84 (126)
+.
T Consensus 93 V~ 94 (100)
T 2yuv_A 93 VR 94 (100)
T ss_dssp EC
T ss_pred Ee
Confidence 54
No 68
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.65 E-value=5.6e-15 Score=87.23 Aligned_cols=112 Identities=20% Similarity=0.366 Sum_probs=81.1
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcE-EEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRI-DMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~-~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
+.+.+|+++.|.|.+.+.|.+.+.|++++..+....+. ..........|.|.++...|.|.|+|.+.+..+.....+.+
T Consensus 25 ~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l 104 (241)
T 3grw_A 25 LAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTL 104 (241)
T ss_dssp EEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred eEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEEEEeecCCceEEEEEE
Confidence 56778999999999999999999999999887543221 01111223489999999999999999999988877777777
Q ss_pred EecCC---CCeecc----CcceeCCCeeEEEEEEccCCcc
Q psy12132 82 SGIPN---IPVFQK----SSRRLGPDGYRLVWQVDTYSAI 114 (126)
Q Consensus 82 ~~~~~---~~~~~~----~~~~~~~~~~~l~~~~~~~~~~ 114 (126)
.+... ++.... ......++.+.|.|...+.++.
T Consensus 105 ~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p 144 (241)
T 3grw_A 105 DVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQP 144 (241)
T ss_dssp EEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCC
T ss_pred EEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCC
Confidence 76432 222221 1223457789999999777553
No 69
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.65 E-value=1e-14 Score=77.11 Aligned_cols=78 Identities=17% Similarity=0.363 Sum_probs=63.3
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLS 82 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~ 82 (126)
+.+..|+++.|.|.+. .|.+.+.|++++..+....++.+...+....|.|.++...|.|.|+|.+.| ....+.|.
T Consensus 23 ~~~~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n----~~~~~~l~ 97 (113)
T 2cpc_A 23 VAAVRLERVVLTCELC-RPWAEVRWTKDGEEVVESPALLLQKEDTVRRLVLPAVQLEDSGEYLCEIDD----ESASFTVT 97 (113)
T ss_dssp EEEETTCCEEEEEEES-CTTCCCEEEETTEECCCBTTBEEEECSSEEEEEESSCCTTTCEEEEEESSS----CEEEEEEE
T ss_pred EEEEcCCeEEEEEEec-CCCCeEEEEECCEECccCCCEEEEECCCEEEEEECCCCcccCEEEEEEEec----CcEEEEEE
Confidence 4567899999999995 788999999999988777777776666667999999999999999999988 33444555
Q ss_pred ecC
Q psy12132 83 GIP 85 (126)
Q Consensus 83 ~~~ 85 (126)
+..
T Consensus 98 V~~ 100 (113)
T 2cpc_A 98 VTE 100 (113)
T ss_dssp EEC
T ss_pred Eec
Confidence 443
No 70
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.65 E-value=1.3e-15 Score=79.27 Aligned_cols=65 Identities=18% Similarity=0.384 Sum_probs=57.8
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQ 67 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 67 (126)
++.+.+|+++.|.|.+.+.|.+ +.|++++..+....++.+..++....|.|.++...|.|.|+|.
T Consensus 17 ~~~v~~G~~v~l~C~~~~~p~~-v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 81 (103)
T 2e7b_A 17 DLEVLEGGAATLRCVLSSVAAP-VKWCYGNNVLRPGDKYSLRQEGAMLELVVRNLRPQDSGRYSCS 81 (103)
T ss_dssp CEEEESSSCEEEEEECSSCCCS-CEEEESSSBCCCSSSEEEEECSSEEEEEECSCCTTTCCCEEEE
T ss_pred cEEEECCCcEEEEEEEeCCCCC-eEEEECCEECCCCCcEEEEEcCCEEEEEEccCCcccCEEEEEE
Confidence 4667889999999999998888 9999999888777788887777777899999999999999998
No 71
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.64 E-value=8.2e-15 Score=85.14 Aligned_cols=112 Identities=13% Similarity=0.235 Sum_probs=76.7
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECC--E---Eec---------cCCcEEEEecCCeEEEEEecCCCCCCEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDG--T---AIT---------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQ 67 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~--~---~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 67 (126)
.+.+.+|+++.|.|.+.+.|.+.+.|+++. . .+. ...++.....+....|.|.+++..|.|.|.|.
T Consensus 10 ~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 89 (213)
T 3nl4_L 10 SVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECADAATYYCQ 89 (213)
T ss_dssp EEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred eEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChHHCEEEEEe
Confidence 367889999999999998889999999842 1 111 13566666566677899999999999999999
Q ss_pred EecCCce---eE--EEEEEEecCCCCeecc-Cc--ceeCCCeeEEEEEEccCCc
Q psy12132 68 ASNNLGS---SQ--QFIQLSGIPNIPVFQK-SS--RRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 68 ~~~~~~~---~~--~~~~l~~~~~~~~~~~-~~--~~~~~~~~~l~~~~~~~~~ 113 (126)
+.+..+. .. ..+.+.....+|.+.. .. ....++.+.|.|.+.+..|
T Consensus 90 ~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P 143 (213)
T 3nl4_L 90 STYENPTYVSFGGGTEVGVKGDPVAPTVLIFPPSADLVATGTVTIVCVANKYFP 143 (213)
T ss_dssp ECCSSTTTCEECCCEEEEEECCCBCCEEEEECCCHHHHTTSEEEEEEEEEEEBS
T ss_pred cCCCCceeEEeCCCeEEEEeCCCcCCeEEEeCCchhhccCCcEeEEEEEecccC
Confidence 9986552 22 2333333233443322 11 1235778999999977433
No 72
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.64 E-value=3.8e-15 Score=87.25 Aligned_cols=112 Identities=21% Similarity=0.371 Sum_probs=81.1
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEE-EecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDM-HVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~-~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
+.+.+|+++.|.|.+.+.|.+.+.|++++..+....++.. ........|.|.++...|.|.|+|.+.+..+.....+.+
T Consensus 29 ~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l 108 (231)
T 3ojm_B 29 HAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHL 108 (231)
T ss_dssp EEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEEEEecccCcccccEEE
Confidence 4577899999999999999999999999988764432210 111223479999999999999999999988877777777
Q ss_pred EecCC---CCeecc----CcceeCCCeeEEEEEEccCCcc
Q psy12132 82 SGIPN---IPVFQK----SSRRLGPDGYRLVWQVDTYSAI 114 (126)
Q Consensus 82 ~~~~~---~~~~~~----~~~~~~~~~~~l~~~~~~~~~~ 114 (126)
.+... ++.... ......++.+.|.|...+.++.
T Consensus 109 ~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p 148 (231)
T 3ojm_B 109 DVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQP 148 (231)
T ss_dssp EEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCC
T ss_pred EEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCC
Confidence 66432 222221 1223567889999998776543
No 73
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.64 E-value=7.8e-15 Score=78.18 Aligned_cols=79 Identities=24% Similarity=0.344 Sum_probs=63.7
Q ss_pred ccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecC----CeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEEEec
Q psy12132 9 MRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSS----EKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGI 84 (126)
Q Consensus 9 ~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~~~ 84 (126)
....|.|.+.|.|.|.+.|++++..+....+....... ....|.|.++...|.|.|+|.+.|..|...+.+.+.+.
T Consensus 21 ~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~ 100 (118)
T 1wwc_A 21 LEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTINGHFL 100 (118)
T ss_dssp CEEEEEEEEECSSCCEEEEEETTEECCCSSSEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEEEECCS
T ss_pred cceEEEEEeeeeCCCeEEEEECCEECCCCCceeEEEeccCccccEEEEECCCChhcCEEEEEEEECCCCeEeeEEEEEEc
Confidence 45788999999999999999999988766544432211 24589999999999999999999999999998888765
Q ss_pred CCC
Q psy12132 85 PNI 87 (126)
Q Consensus 85 ~~~ 87 (126)
..|
T Consensus 101 ~~P 103 (118)
T 1wwc_A 101 KEP 103 (118)
T ss_dssp CCC
T ss_pred cCC
Confidence 433
No 74
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.64 E-value=1.3e-15 Score=79.56 Aligned_cols=69 Identities=14% Similarity=0.214 Sum_probs=59.7
Q ss_pred ceeccCCccEEEEEEeeecCC-CeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEec
Q psy12132 2 HSITAPDMRAEIICNVYANPP-AKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASN 70 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~-~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~ 70 (126)
++.+.+|+++.|.|.+.+.|. +.+.|++++..+....++.+...+....|.|.++...|.|.|+|.+.+
T Consensus 17 ~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 86 (104)
T 2eny_A 17 TMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVFSVRG 86 (104)
T ss_dssp CEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBCSSCEEEEETTEEEEEECSCCTTTCSCEEEEETT
T ss_pred CcEEcCCCcEEEEEEEcCCCCCceeEEEECCEECCCCCCEEEEEcCCEEEEEECCCCHHHCEEEEEEECC
Confidence 467889999999999987774 479999999888877788777777777999999999999999998865
No 75
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.64 E-value=5e-16 Score=82.52 Aligned_cols=85 Identities=20% Similarity=0.269 Sum_probs=64.8
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEE-ecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMH-VSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQ 80 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 80 (126)
++.+.+|+++.|.|.+.+.|.|.+.|++++..+....++.+. ..+....|.|.++...|.|.|+|.+ |.......
T Consensus 22 ~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~----g~~~~~~~ 97 (115)
T 2cr6_A 22 DVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKDSGTIYFEA----GDQRASAA 97 (115)
T ss_dssp EEEEETTSCEECCCEEESTTCCSCEEEESSCEECCSSSCCBCCBTTTBCCBEECSCCTTTCEEEEEEE----TTEECCEE
T ss_pred cEEEeCCCcEEEEEEEcCCCCCccEEEECCEECCCCCcEEEEEcCCCEEEEEEcCCChhhCEEEEEEE----CCeeEEEE
Confidence 456788999999999999999999999999888766655544 2344568999999999999999994 33444555
Q ss_pred EEecCCCCee
Q psy12132 81 LSGIPNIPVF 90 (126)
Q Consensus 81 l~~~~~~~~~ 90 (126)
|.+...|..+
T Consensus 98 L~V~~~p~~~ 107 (115)
T 2cr6_A 98 LRVTEKPSVF 107 (115)
T ss_dssp EEEECCSSCC
T ss_pred EEEECCCcee
Confidence 6655444443
No 76
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.64 E-value=8.3e-16 Score=80.52 Aligned_cols=80 Identities=16% Similarity=0.302 Sum_probs=65.2
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
++.+.+|+++.|.|.+.+.|.+ +.|++++..+....++.+...+....|.|.++...|.|.|+|.+.|......+.+.+
T Consensus 17 ~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~l~V 95 (106)
T 2dlt_A 17 DLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPSKRITISHVGRFHKLVIDDVRPEDEGDYTFVPDGYALSLSAKLNF 95 (106)
T ss_dssp CEEEESSCCEECCCEESCSSCE-EEEEESSCBCCCCSSCEEEEETTEEEEEESSCCTTTCSCEEEEEETSCCCCCBCEEE
T ss_pred CeEEeCCCeEEEEEEEcCCCcc-eEEEcCCEECcCCCCEEEEEeCCEEEEEECCCCcCCCEEEEEEEccCCceEEEEEEE
Confidence 4678899999999999988777 999999988877777777766666789999999999999999999974444444443
Q ss_pred E
Q psy12132 82 S 82 (126)
Q Consensus 82 ~ 82 (126)
.
T Consensus 96 ~ 96 (106)
T 2dlt_A 96 L 96 (106)
T ss_dssp E
T ss_pred E
Confidence 3
No 77
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.64 E-value=1.2e-14 Score=88.66 Aligned_cols=111 Identities=16% Similarity=0.276 Sum_probs=76.6
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEE--ecCCeEEEEEecCCC-CCCEEEEEEEecCCceeEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMH--VSSEKHSLLVRHIKD-TDFGNYMCQASNNLGSSQQF 78 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~--~~~~~~~l~i~~~~~-~d~g~y~C~~~~~~~~~~~~ 78 (126)
++.+.+|+++.|.|.+.+.|.+.+.|++++..+... ++... ..+....|.|.++.. .|.|.|+|.+.+..|.....
T Consensus 15 ~~~v~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~~~-~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~~~ 93 (304)
T 2yd9_A 15 DQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQ-RFETIEFDESAGAVLRIQPLRTPRDENVYECVAQNSVGEITVH 93 (304)
T ss_dssp CEEEETTSCEEEEEEEECSSCCEEEEC-------CT-TEEEEEETTTTEEEEEECSCCTTTTCSEEEEEEECSSCEECCE
T ss_pred ceEecCCCeEEEEEEEEEeCCCeEEEEECCEECCCC-ceEEEEecCCCceEEEEecccccCCCeEEEEEEECCCCeEEEE
Confidence 456789999999999999999999999998876533 33332 233346899999998 99999999999998887777
Q ss_pred EEEEecCCC------CeeccC---cceeCCCeeEEEEEEccCCc
Q psy12132 79 IQLSGIPNI------PVFQKS---SRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 79 ~~l~~~~~~------~~~~~~---~~~~~~~~~~l~~~~~~~~~ 113 (126)
+.|.+...+ |.+... .....++.+.|.|...+.++
T Consensus 94 ~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~ 137 (304)
T 2yd9_A 94 AKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPD 137 (304)
T ss_dssp EEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSC
T ss_pred EEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCC
Confidence 777664321 333222 12346788999999977654
No 78
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.64 E-value=1.3e-14 Score=92.51 Aligned_cols=111 Identities=11% Similarity=0.070 Sum_probs=76.3
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
++.+.+|+++.|.|.+.+.|.+.+.|++++..+.....+.. .......|.|.++...|.|.|+|.+.|..|.....+.|
T Consensus 57 ~v~V~~G~~v~L~C~v~g~P~p~i~W~~~~~~l~~~~~~~~-~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l 135 (423)
T 3qs7_E 57 AVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDL-QNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTV 135 (423)
T ss_dssp EEEECSSCCEEEEEECSCCSSCEEEEEETTEEECCCCBC------CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEE
T ss_pred cEEEecCCcEEEEEEEEcCCCCeEEEEECCCccCccceecc-ccceEEEEEEeecCcccCEEEEEEEEcCCCcEEEEEEE
Confidence 46788999999999999999999999998876654322211 11123469999999999999999999999988888888
Q ss_pred EecCCCCeeccC-cceeCCCeeEEEEEEccCCc
Q psy12132 82 SGIPNIPVFQKS-SRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 82 ~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~ 113 (126)
.+...+...... .....++.+.|.|.+.|.++
T Consensus 136 ~V~~~p~~~~~~p~~~~~~~~~~L~C~a~G~P~ 168 (423)
T 3qs7_E 136 SIRNTLLYTLRRPYFRKMENQDALVCISESVPE 168 (423)
T ss_dssp EEC-----CEEEEEEEECSSSSCEEEEEEESSC
T ss_pred EEecCccccccCCcEeccCCceEEEEEEeeecC
Confidence 776332221111 11234566789999988754
No 79
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.64 E-value=3.6e-15 Score=76.58 Aligned_cols=79 Identities=20% Similarity=0.358 Sum_probs=65.9
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
++.+.+|+++.|.|.+.+ .|.+.|++++..+....++... .+ .|.|.++...|.|.|+|.+.|..|.....+.+
T Consensus 10 ~~~v~~G~~~~l~C~~~~--~p~v~W~k~g~~~~~~~~~~~~-~~---~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l 83 (95)
T 4hwu_A 10 AYVVAPGESLELQCMLKD--AAVISWTKDGVHLGPNNRTVLI-GE---YLQIKGATPRDSGLYACTAARTVDSETWIFMV 83 (95)
T ss_dssp EEEECTTSCEEEECCCCT--TCEEEEEETTEEECCCSSEEEE-TT---EEEECSCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred cEEECCCCEEEEEEEeCC--CCEEEEEECCEECCCCceEEEe-CC---EEEECcCCcccCEEEEEEEccCCCcEEEEEEE
Confidence 356789999999999985 5799999999988766666543 22 79999999999999999999999988888888
Q ss_pred EecCC
Q psy12132 82 SGIPN 86 (126)
Q Consensus 82 ~~~~~ 86 (126)
.+...
T Consensus 84 ~V~~~ 88 (95)
T 4hwu_A 84 NVTDA 88 (95)
T ss_dssp EECCC
T ss_pred EEeCC
Confidence 87543
No 80
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.64 E-value=1.3e-14 Score=84.08 Aligned_cols=82 Identities=18% Similarity=0.405 Sum_probs=71.0
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEec-CCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVS-SEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
+.+..|+.+.|.|.+.+.|.|.+.|++++..+....++.+... +....|.|.++...|.|.|+|.+.|..|.....+.|
T Consensus 127 ~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l 206 (212)
T 2r15_A 127 VTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTV 206 (212)
T ss_dssp EEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEccCCeEEEEEEEcCCCCceEEEEECCeECccCCCEEEEEcCCCEEEEEEcCcchHHCeEEEEEEEcCCCcEEEEEEE
Confidence 4677899999999999999999999999998887777666554 456789999999999999999999999988888877
Q ss_pred Eec
Q psy12132 82 SGI 84 (126)
Q Consensus 82 ~~~ 84 (126)
.+.
T Consensus 207 ~V~ 209 (212)
T 2r15_A 207 SVF 209 (212)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 81
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.64 E-value=1e-14 Score=83.37 Aligned_cols=111 Identities=18% Similarity=0.232 Sum_probs=78.8
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEecc-CCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCce-eEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITL-GGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGS-SQQFI 79 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~-~~~~~ 79 (126)
++.+.+|+++.|.|.+.+.|.+.+.|++++..+.. ..++....++ ..|.|.++...|.|.|+|.+.+..|. .....
T Consensus 16 ~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 93 (192)
T 2iep_A 16 TVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENG--QLLTILSVEDSDDGIYCCTANNGVGGAVESCG 93 (192)
T ss_dssp EEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEGGG--TEEEESSCCGGGCEEEEEEEECSSSCCEEEEE
T ss_pred ceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcCCc--cEEEEcCCCcccCeEEEEEEEcCCCceeEeEE
Confidence 35678899999999999999999999999987754 3455554433 37999999999999999999987765 33334
Q ss_pred EEEecCCCCeec--cCcceeCCCeeEEEEEEccCCcc
Q psy12132 80 QLSGIPNIPVFQ--KSSRRLGPDGYRLVWQVDTYSAI 114 (126)
Q Consensus 80 ~l~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~ 114 (126)
.+.+...+.... .......++.+.|.|...+.++.
T Consensus 94 ~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~ 130 (192)
T 2iep_A 94 ALQVKMKPKITRPPINVKIIEGLKAVLPCTTMGNPKP 130 (192)
T ss_dssp EEEEEEEEEEEECCCCEEEETTSCEEECCEEEEESCC
T ss_pred EEEEEeCCccccCCcceEEeCCCcEEEEEEEeccCCc
Confidence 444322221111 12234567789999998766543
No 82
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.64 E-value=3.4e-15 Score=86.86 Aligned_cols=78 Identities=17% Similarity=0.347 Sum_probs=65.4
Q ss_pred eccCCccEEEEEEeeec-CCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEEE
Q psy12132 4 ITAPDMRAEIICNVYAN-PPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLS 82 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~-p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~ 82 (126)
.+.+|+++.|.|.+.+. |.|.+.|+|++..+....++. ...+...|.|.++...|.|.|+|.+.|..|...+.+.|.
T Consensus 127 ~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~~~~~~--~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~ 204 (207)
T 3rbs_A 127 EVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHD--FKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLV 204 (207)
T ss_dssp EEETTTEEEEEEEEESCCTTCEEEEEETTEEECCCCCCC--CSSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEEC
T ss_pred EEcCCCcEEEEEEEeCCCCCCEEEEEECCEECCCCCceE--cCCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEe
Confidence 46789999999999998 899999999999887654432 222345799999999999999999999999999888876
Q ss_pred e
Q psy12132 83 G 83 (126)
Q Consensus 83 ~ 83 (126)
+
T Consensus 205 ~ 205 (207)
T 3rbs_A 205 D 205 (207)
T ss_dssp C
T ss_pred c
Confidence 4
No 83
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.63 E-value=1.2e-14 Score=83.22 Aligned_cols=81 Identities=21% Similarity=0.309 Sum_probs=71.3
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLS 82 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~ 82 (126)
+.+..|+.+.|.|.+.+.|.+.+.|++++..+....++.....+....|.|.++...|.|.|+|.+.|..|.....+.|.
T Consensus 113 ~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 192 (194)
T 2a38_A 113 MTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATSTAELL 192 (194)
T ss_dssp EEECTTEEEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEEETTEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred EEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCCCcEEEEEcCCEEEEEECCCChhcCeEEEEEEEeCCCceEEEEEEE
Confidence 45778999999999999999999999999988877777777766667899999999999999999999999888877776
Q ss_pred e
Q psy12132 83 G 83 (126)
Q Consensus 83 ~ 83 (126)
|
T Consensus 193 V 193 (194)
T 2a38_A 193 V 193 (194)
T ss_dssp E
T ss_pred E
Confidence 5
No 84
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.63 E-value=5.4e-15 Score=92.94 Aligned_cols=107 Identities=19% Similarity=0.221 Sum_probs=77.7
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEEC-CEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRD-GTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~-~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
+.+.+|+++.|.|.+.|.|.|.+.|+++ +..+....+ .. .....|.|.++...|.|.|+|.+.|..|.......|
T Consensus 215 ~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~--~~--~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l 290 (384)
T 3kld_A 215 VPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKAR--RH--KSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQL 290 (384)
T ss_dssp EEEETTSCEEEEEEEEEESCCEEEEEETTCCCCCTTCE--EC--TTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred eEecCCCcEEEEEEEeecCCCcEEEEeCCCccccccce--ec--CCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEE
Confidence 3467799999999999999999999995 444432221 11 123479999999999999999999999988777777
Q ss_pred EecCCCCeecc--CcceeCCCeeEEEEEEccCCc
Q psy12132 82 SGIPNIPVFQK--SSRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 82 ~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~ 113 (126)
.+...|..... ......++.+.|.|...|.++
T Consensus 291 ~v~~~P~~~~~~~~~~v~~g~~v~l~C~~~g~P~ 324 (384)
T 3kld_A 291 TFYAQPNWVQIINDIHVAMEESVFWECKANGRPK 324 (384)
T ss_dssp EEEEEEEEEECCCCEEECTTCCEEEECEEEEESC
T ss_pred EEecCCccccCCCceEecCCCCEEEEeECCccCC
Confidence 76433322211 222356788999999987754
No 85
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.63 E-value=1.9e-14 Score=85.00 Aligned_cols=122 Identities=13% Similarity=0.151 Sum_probs=79.9
Q ss_pred ceeccCCccEEEEEEeeecC----CCeeEEEECC--E---Eec---------cCCcEEEEecCCeEEEEEecCCCCCCEE
Q psy12132 2 HSITAPDMRAEIICNVYANP----PAKVEWFRDG--T---AIT---------LGGRIDMHVSSEKHSLLVRHIKDTDFGN 63 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p----~~~~~w~~~~--~---~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 63 (126)
++.+.+|+++.|.|.+.+.| .+.+.|+++. . .+. ...++.....+....|.|.++...|.|.
T Consensus 10 ~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 89 (240)
T 1moe_A 10 SLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEADDVAT 89 (240)
T ss_dssp EEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred eEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCChhhCEE
Confidence 35788999999999999887 6789999842 1 111 1246666555556789999999999999
Q ss_pred EEEEEecCCce-eEEEEEEEecCC-----CCeecc---CcceeCCCeeEEEEEEccCCcceeEEEEEEE
Q psy12132 64 YMCQASNNLGS-SQQFIQLSGIPN-----IPVFQK---SSRRLGPDGYRLVWQVDTYSAIIQYLLKFRE 123 (126)
Q Consensus 64 y~C~~~~~~~~-~~~~~~l~~~~~-----~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~r~ 123 (126)
|.|.+.+..+. ......|.+... ++.... ......++.+.|.|...+.++......|||+
T Consensus 90 Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~ 158 (240)
T 1moe_A 90 YYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQ 158 (240)
T ss_dssp EEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred EEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEE
Confidence 99999987543 222334444322 122211 1224568889999999776532223445554
No 86
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.63 E-value=2e-14 Score=75.19 Aligned_cols=82 Identities=18% Similarity=0.290 Sum_probs=63.8
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCE-Eec-------cCCcEEEEecC-CeEEEEEecCCCCCCEEEEEEEecCC
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGT-AIT-------LGGRIDMHVSS-EKHSLLVRHIKDTDFGNYMCQASNNL 72 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~-~~~-------~~~~~~~~~~~-~~~~l~i~~~~~~d~g~y~C~~~~~~ 72 (126)
++.+.+|+++.|.|.+.+.|.+.+.|++++. .+. ...++...... ....|.|.++...|.|.|+|.+.+ .
T Consensus 15 ~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n-~ 93 (108)
T 3m45_A 15 NVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEGQYTCSLFT-M 93 (108)
T ss_dssp CEEEETTSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGGGCEEEEEEECS-S
T ss_pred eeEEEeCCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChhHCeEEEEEEEc-C
Confidence 4678899999999999998989999998764 222 22355543222 356899999999999999999999 7
Q ss_pred ceeEEEEEEEec
Q psy12132 73 GSSQQFIQLSGI 84 (126)
Q Consensus 73 ~~~~~~~~l~~~ 84 (126)
+.......|.+.
T Consensus 94 ~~~~~~~~L~V~ 105 (108)
T 3m45_A 94 PVKTSKAYLTVL 105 (108)
T ss_dssp SCEEEEEEEEEE
T ss_pred CCcEEEEEEEEE
Confidence 777777777765
No 87
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.63 E-value=1.6e-14 Score=75.12 Aligned_cols=65 Identities=17% Similarity=0.326 Sum_probs=57.0
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQ 67 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 67 (126)
++.+.+|+++.|.|.+ +.|.+.+.|++++..+....++.+..++....|.|.++...|.|.|+|.
T Consensus 17 ~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 81 (103)
T 2dku_A 17 NLQVEEKGTAVFTCKT-EHPAATVTWRKGLLELRASGKHQPSQEGLTLRLTISALEKADSDTYTCD 81 (103)
T ss_dssp CEEEETTSEEEEEEEC-SSCCSCCEEEESSCBCCSSSSEEEEEETTEEEEEEESCCTTTCSEEEEE
T ss_pred cEEEeCCCcEEEEEEe-CCCCCeEEEEeCCEECCCCCeEEEEeCCCEEEEEECCCCcccCEEEEEE
Confidence 4677889999999995 7889999999999888777787777666677899999999999999998
No 88
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.62 E-value=4.9e-14 Score=85.11 Aligned_cols=122 Identities=14% Similarity=0.178 Sum_probs=79.2
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECC-----EEec---------cCCcEEEEecCCeEEEEEecCCCCCCEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDG-----TAIT---------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQ 67 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~-----~~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 67 (126)
++.+.+|+++.|.|.+.+.|.+.+.|++++ ..+. ...++.....+....|.|.+++..|.|.|.|.
T Consensus 21 ~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 100 (276)
T 3auv_A 21 SLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQ 100 (276)
T ss_dssp EEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred eEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCChhhCEEEEEE
Confidence 356889999999999998888999999853 1221 13466665555567899999999999999999
Q ss_pred EecCCce-eEEEEEEEecCC-------------CCeecc---CcceeCCCeeEEEEEEccCCcceeEEEEEEE
Q psy12132 68 ASNNLGS-SQQFIQLSGIPN-------------IPVFQK---SSRRLGPDGYRLVWQVDTYSAIIQYLLKFRE 123 (126)
Q Consensus 68 ~~~~~~~-~~~~~~l~~~~~-------------~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~r~ 123 (126)
+.+..+. ......|.+... ++.... ......++.+.|.|...+.++......|||+
T Consensus 101 ~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~ 173 (276)
T 3auv_A 101 QHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQ 173 (276)
T ss_dssp ECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEEEEEE
T ss_pred EecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCCCEEEEEEc
Confidence 9986432 122233443322 112111 2234568899999999776532223445554
No 89
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.62 E-value=2.7e-14 Score=82.62 Aligned_cols=108 Identities=16% Similarity=0.214 Sum_probs=76.5
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEe------------ccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEe
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAI------------TLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQAS 69 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 69 (126)
++.+.+|+++.|.|.+.+.|.+.+.|++++..+ ....++.... ..|.|.++...|.|.|+|.+.
T Consensus 10 ~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~----~~L~i~~v~~~D~G~Y~C~~~ 85 (212)
T 1f97_A 10 DVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSS----SGITFSSVTRKDNGEYTCMVS 85 (212)
T ss_dssp EEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEET----TEEEESCCCGGGCEEEEEEEE
T ss_pred CeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeec----eeEEEcccCcccCeEEEEEEE
Confidence 456788999999999998899999999976432 1223444332 379999999999999999999
Q ss_pred cCCc--eeEEEEEEEecCC--CCeeccCcceeCCCeeEEEEE-EccCCc
Q psy12132 70 NNLG--SSQQFIQLSGIPN--IPVFQKSSRRLGPDGYRLVWQ-VDTYSA 113 (126)
Q Consensus 70 ~~~~--~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~-~~~~~~ 113 (126)
+..| .....+.|.+... .+..........++.+.|.|. ..+.++
T Consensus 86 ~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~ 134 (212)
T 1f97_A 86 EEGGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGNRAVLTCSEHDGSPP 134 (212)
T ss_dssp ETTSSSEEEEEEEEEEEBCCCCCEEECCSEEETTSCEEEEEECSCCBSC
T ss_pred ccCCCcccEEEEEEEEEcCCCCcccCCccccCCCCeEEEEEEcccCcCC
Confidence 8765 4455555555432 233333334567888999999 455544
No 90
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.62 E-value=8e-14 Score=82.68 Aligned_cols=122 Identities=17% Similarity=0.208 Sum_probs=78.6
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECC-----EEec---------cCCcEEEEecCCeEEEEEecCCCCCCEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDG-----TAIT---------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQ 67 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~-----~~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 67 (126)
++.+.+|+++.|.|.+.+.|.+.+.|+++. ..+. ...++..........|.|.+++..|.|.|.|.
T Consensus 10 ~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 89 (242)
T 2znx_A 10 TLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQ 89 (242)
T ss_dssp EEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred eEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHHCEEEEEe
Confidence 367889999999999998888999999842 1111 13466655455567899999999999999999
Q ss_pred EecCCcee-EEEEEEEecCCC------------C-eecc--CcceeCCCeeEEEEEEccCCcceeEEEEEEE
Q psy12132 68 ASNNLGSS-QQFIQLSGIPNI------------P-VFQK--SSRRLGPDGYRLVWQVDTYSAIIQYLLKFRE 123 (126)
Q Consensus 68 ~~~~~~~~-~~~~~l~~~~~~------------~-~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~r~ 123 (126)
+.+..+.. .....|.+...+ + .... ......++.+.|.|...+.+.......|||+
T Consensus 90 ~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~ 161 (242)
T 2znx_A 90 QSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGDSITSDYXSXIRK 161 (242)
T ss_dssp ECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEESSCGGGSCEEEEEE
T ss_pred EecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEccccCCcceeeEee
Confidence 99864321 122334433221 1 1111 1234568899999999765421223445554
No 91
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.61 E-value=8.1e-15 Score=83.24 Aligned_cols=103 Identities=15% Similarity=0.211 Sum_probs=73.1
Q ss_pred eeccCCccEEEEEEeee--cCCCeeEEEECCEEec----------cCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEec
Q psy12132 3 SITAPDMRAEIICNVYA--NPPAKVEWFRDGTAIT----------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASN 70 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~--~p~~~~~w~~~~~~~~----------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~ 70 (126)
+.+.+|+++.|.|...+ .+.+.+.|++++..+. ...++.+..++ .|.|.++...|.|.|+|.+.+
T Consensus 6 v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~g---sL~I~~v~~~D~G~Y~C~~~n 82 (176)
T 1hng_A 6 VWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANG---DLKIKNLTRDDSGTYNVTVYS 82 (176)
T ss_dssp EEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTS---CEEESSCCGGGCEEEEEEEEE
T ss_pred EEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCC---cEEEcccccccCEEEEEEEEe
Confidence 66789999999995433 4566899999986542 23455554444 599999999999999999999
Q ss_pred CCcee--EEEEEEEecCC--CCeeccCcceeCCCeeEEEEEEccCCc
Q psy12132 71 NLGSS--QQFIQLSGIPN--IPVFQKSSRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 71 ~~~~~--~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~ 113 (126)
..|.. ...+.|.+... .|.+. .....+.|+|...+.++
T Consensus 83 ~~g~~~~~~~~~l~V~~~~~~p~i~-----~~~~~v~L~C~~~g~p~ 124 (176)
T 1hng_A 83 TNGTRILNKALDLRILEMVSKPMIY-----WECSNATLTCEVLEGTD 124 (176)
T ss_dssp TTCCEEEEEEEEEEEECCCCCCEEE-----EETTTTEEEEECSSCSS
T ss_pred CCCCEEEEEEEEEEEeCCCCCCEEE-----ecCCcEEEEEEecCCCC
Confidence 88775 55666665432 22222 12335899999877765
No 92
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.61 E-value=2.5e-14 Score=83.11 Aligned_cols=110 Identities=16% Similarity=0.244 Sum_probs=76.6
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEEC--CE---Eec---------cCCcEEEEecCCeEEEEEecCCCCCCEEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRD--GT---AIT---------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQA 68 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~--~~---~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 68 (126)
+.+.+|+++.|.|.+.+.+.+.+.|++. +. .+. ...++..........|.|.++...|.|.|.|.+
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 89 (213)
T 3mj8_L 10 VSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDEADYYCQS 89 (213)
T ss_dssp EEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred EEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhCEEEEEEe
Confidence 5678899999999999889999999982 21 110 224666555556778999999999999999999
Q ss_pred ecCCc---eeEEEEEEEecC---CCCeeccC---cceeCCCeeEEEEEEccCC
Q psy12132 69 SNNLG---SSQQFIQLSGIP---NIPVFQKS---SRRLGPDGYRLVWQVDTYS 112 (126)
Q Consensus 69 ~~~~~---~~~~~~~l~~~~---~~~~~~~~---~~~~~~~~~~l~~~~~~~~ 112 (126)
.+..+ .......|.+.. .+|.+... .....++.+.|+|...+..
T Consensus 90 ~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~ 142 (213)
T 3mj8_L 90 WDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVCMINGFY 142 (213)
T ss_dssp EETTTTEEEEBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEB
T ss_pred ccCCcceeEEcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEEEEeecee
Confidence 98876 333344454431 23333221 1123578899999997753
No 93
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.61 E-value=1.1e-14 Score=83.57 Aligned_cols=82 Identities=20% Similarity=0.277 Sum_probs=70.8
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEec-CCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRH-IKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
+.+..|+.+.|.|.+.+.|.|.+.|++++..+....++..........|.|.+ +...|.|.|+|.+.|..|.....+.|
T Consensus 114 ~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l 193 (197)
T 2j8h_A 114 VHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVEL 193 (197)
T ss_dssp EEEETTCCCEEEEEEEEESCCEEEEEESSCEECSSSSCEEEECSSEEEEECTTCCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecCCCEEEEEcCCceEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEE
Confidence 34567999999999999999999999999888777777766666667899999 99999999999999999988888877
Q ss_pred Eec
Q psy12132 82 SGI 84 (126)
Q Consensus 82 ~~~ 84 (126)
.+.
T Consensus 194 ~V~ 196 (197)
T 2j8h_A 194 DVA 196 (197)
T ss_dssp EEE
T ss_pred EEe
Confidence 763
No 94
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.61 E-value=8e-14 Score=81.34 Aligned_cols=111 Identities=16% Similarity=0.152 Sum_probs=74.5
Q ss_pred ceeccCCccEEEEEEeeecCC-----CeeEEEECCEEecc---------------CCcEEEEec---CCeEEEEEecCCC
Q psy12132 2 HSITAPDMRAEIICNVYANPP-----AKVEWFRDGTAITL---------------GGRIDMHVS---SEKHSLLVRHIKD 58 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~-----~~~~w~~~~~~~~~---------------~~~~~~~~~---~~~~~l~i~~~~~ 58 (126)
.+.+..|+++.|.|.+.+.|. +.+.|++++..+.. ..+..+... .....|.|.++..
T Consensus 10 ~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~ 89 (222)
T 3sbw_C 10 LYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVKL 89 (222)
T ss_dssp EEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSCCG
T ss_pred cEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCccc
Confidence 356788999999999876663 37999997633210 123333221 1346899999999
Q ss_pred CCCEEEEEEEecCCceeEEEEEEEecCCCCeeccC--cceeCCCeeEEEEEEccCCc
Q psy12132 59 TDFGNYMCQASNNLGSSQQFIQLSGIPNIPVFQKS--SRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 59 ~d~g~y~C~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~ 113 (126)
.|.|.|+|.+.+ .+.....+.|.+...+...... .....++.+.|.|.+.+.++
T Consensus 90 ~D~G~Y~C~~~~-~~~~~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~L~C~~~g~P~ 145 (222)
T 3sbw_C 90 QDAGVYRCMISY-GGADYKRITVKVNAPYNKINQRILVVDPVTSEHELTCQAEGYPK 145 (222)
T ss_dssp GGCEEEEEEEES-SSEEEEEEEEEEEBCCCCCEEEEEEEETTTTEEEEEEEEEEBSC
T ss_pred ccCeEEEEEEEe-CCCceeEEEEEEECCCCCCCceeeeeecCCCcEEEEEEecCCCC
Confidence 999999999998 5566666666664333221111 13346778999999977543
No 95
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.61 E-value=8e-16 Score=79.92 Aligned_cols=68 Identities=21% Similarity=0.375 Sum_probs=58.6
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCC----cEEEEecCCeEEEEEecCCCCCCEEEEEEEec
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGG----RIDMHVSSEKHSLLVRHIKDTDFGNYMCQASN 70 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~----~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~ 70 (126)
++.+.+|+++.|.|.+.+.| +.+.|++++..+.... ++.+...+....|.|.++...|.|.|+|.+.|
T Consensus 17 ~~~v~~G~~v~l~C~~~~~~-~~v~W~k~g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n 88 (101)
T 2edk_A 17 DQQVFVGDRVEMAVEVSEEG-AQVMWMKNGVELTREDSFKARYRFKKDGKRHILIFSDVVQEDRGRYQVITNG 88 (101)
T ss_dssp CEEEESSCCCBCCEEESCSS-CCCEEEESSCBCCCSCCSSCCCEEEECSSEEEEECSSCCGGGCSBEEEECSS
T ss_pred ceEEcCCCCEEEEEEEeCCC-CEEEEEECCEECCCCCCcceeEEEEECCCEEEEEECCCChhhCEEEEEEEcC
Confidence 45678899999999999888 9999999998877655 56676666677899999999999999999987
No 96
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.61 E-value=7e-14 Score=81.31 Aligned_cols=114 Identities=15% Similarity=0.164 Sum_probs=79.7
Q ss_pred eeccCCccEEEEEEeeecCCC--eeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPA--KVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQ 80 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~--~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 80 (126)
+.+..|+++.|.|.+ +.|.| .+.|.+.+..+ .+... ......|.|.+++..|.|.|.|.+.+..+...+.+.
T Consensus 17 v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l---~~~~~--~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~ 90 (210)
T 1gsm_A 17 VAVALGASRQLTCRL-ACADRGASVQWRGLDTSL---GAVQS--DTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQ 90 (210)
T ss_dssp EEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT---CCEEE--ESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred eEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc---CcEEe--cCCccEEEECccCcccCceEEEEEEeCCCceEEEEE
Confidence 578899999999999 88888 99999854322 22221 233468999999999999999999998888777888
Q ss_pred EEecCCCCeecc-CcceeCCCeeEEEEEEccCCcce--eEEEEEEE
Q psy12132 81 LSGIPNIPVFQK-SSRRLGPDGYRLVWQVDTYSAII--QYLLKFRE 123 (126)
Q Consensus 81 l~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~r~ 123 (126)
|.|...|..... ......++.+ |+|.+.+..|.. ...+.|.+
T Consensus 91 ltV~~~P~~~~i~~~~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk 135 (210)
T 1gsm_A 91 LLVYAFPNQLTVSPAALVPGDPE-VACTAHKVTPVDPNALSFSLLV 135 (210)
T ss_dssp EEEEBCCSEEEEESSSBCTTCCE-EEEEEEEEBCCCTTTEEEEEEE
T ss_pred EEEEecCCCcEEccceEEeCCce-EEEEeCCCCCCCCCCcEEEEEE
Confidence 887644432221 2233355667 999998765543 23445544
No 97
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.61 E-value=8.8e-15 Score=76.43 Aligned_cols=67 Identities=16% Similarity=0.363 Sum_probs=58.0
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccC-CcEEEEecCCeEEEEEecCCCCCCEEEEEEEec
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLG-GRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASN 70 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~ 70 (126)
+.+.+|+++.|.|.+ +.|.+.+.|++++..+... .++.+...+....|.|.++...|.|.|+|.+.+
T Consensus 26 ~~v~~G~~v~L~C~~-~~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 93 (104)
T 1pd6_A 26 YQVSKGHKIRLTVEL-ADHDAEVKWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQCVVGG 93 (104)
T ss_dssp EEEETTSCEEEEEEC-SSSSSCCEEEESSSEECCCSSSSEEEEETTEEEEEECSCSSSSCEEEEEEETT
T ss_pred EEEecCCCEEEEEEE-cCCCCEEEEEECCEECCCCCCeEEEEecCCEEEEEECCCCcccCEEEEEEECC
Confidence 567889999999999 6888999999999888766 677776666677999999999999999999954
No 98
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.61 E-value=2.8e-14 Score=86.32 Aligned_cols=111 Identities=16% Similarity=0.288 Sum_probs=83.0
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEE-CCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCcee-EEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFR-DGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSS-QQFI 79 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~-~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~-~~~~ 79 (126)
++.+.+|+.+.|.|.+.+.|. .+.|++ ++..+....++.....+....|.|.++...|.|.|+|.+.+..|.. ...+
T Consensus 13 ~~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~ 91 (291)
T 2wim_A 13 KVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATV 91 (291)
T ss_dssp EEEEETTCCEEEEEEEESCCS-EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSSCEEEEEE
T ss_pred ceEecCCCcEEEEEEEeCCCC-ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEecccCceEEEEE
Confidence 457789999999999998764 899999 6777766677777766667799999999999999999999987765 3455
Q ss_pred EEEecCCCCeec--cCcceeCCCeeEEEEEEccCCc
Q psy12132 80 QLSGIPNIPVFQ--KSSRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 80 ~l~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~ 113 (126)
.+.+...+.... .......++.+.|.|...+.++
T Consensus 92 ~l~v~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~ 127 (291)
T 2wim_A 92 VLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPA 127 (291)
T ss_dssp EEEEECCCBCCSCCCSEEEETTSCEEECCCCBCSSC
T ss_pred EEEecCCcceEeCCCChhhcCCCCEEEEEEEccCCC
Confidence 565543332221 1223457888999998876644
No 99
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.61 E-value=3.8e-14 Score=82.31 Aligned_cols=112 Identities=19% Similarity=0.279 Sum_probs=75.1
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECC-----EEec---------cCCcEEEEecCCeEEEEEecCCCCCCEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDG-----TAIT---------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQ 67 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~-----~~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 67 (126)
.+.+.+|+++.|.|.+.+.|.+.+.|++.. ..+. ...++..........|.|.++...|.|.|.|.
T Consensus 10 ~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 89 (213)
T 3r06_A 10 SLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESEDIGSYYCQ 89 (213)
T ss_dssp EEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEE
T ss_pred EEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcccCEEEEEe
Confidence 367889999999999998888999999832 1111 13466665555667999999999999999999
Q ss_pred EecCCce-eEEEEEEEe--cCCCCeecc-C--cceeCCCeeEEEEEEccCCc
Q psy12132 68 ASNNLGS-SQQFIQLSG--IPNIPVFQK-S--SRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 68 ~~~~~~~-~~~~~~l~~--~~~~~~~~~-~--~~~~~~~~~~l~~~~~~~~~ 113 (126)
+.+..+. ......+.+ ...+|.+.. . .....++.+.|+|.+.+..|
T Consensus 90 ~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p 141 (213)
T 3r06_A 90 QYYNYPWTFGPGTKLEIKRADAKPTVSIFPPSSEQLGTGSATLVCFVNNFYP 141 (213)
T ss_dssp ECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBS
T ss_pred cccCCceEEcCCceEEEeccCCCceeeeeCCCceecCCCCcEEEEEEeeecC
Confidence 9876432 222233333 223343322 1 11234667999999976544
No 100
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.61 E-value=1.5e-14 Score=73.72 Aligned_cols=73 Identities=16% Similarity=0.343 Sum_probs=59.4
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeE-EEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQ-QFIQ 80 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~-~~~~ 80 (126)
++.+.+|+++.|.|.+.+.|.|.+.|++++..+..... ..|.|.++...|.|.|+|.+.|..|... ..+.
T Consensus 12 ~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~---------~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~ 82 (91)
T 3bfo_A 12 SQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETK---------KLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVE 82 (91)
T ss_dssp CEEECTTSCEEEECEEECSSCCEEEEEETTEECTTCCS---------SEEEESSCCGGGCEEEEEEEECSSCEEECCCEE
T ss_pred ccEecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcCCC---------CeEEECCCCHHhCEEEEEEEEcCCCCEEeeeEE
Confidence 35678899999999999999999999999987654321 2799999999999999999999887543 3445
Q ss_pred EEe
Q psy12132 81 LSG 83 (126)
Q Consensus 81 l~~ 83 (126)
+.+
T Consensus 83 l~V 85 (91)
T 3bfo_A 83 III 85 (91)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 101
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.61 E-value=5.7e-14 Score=81.52 Aligned_cols=112 Identities=17% Similarity=0.286 Sum_probs=75.6
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEEC--CEEe------------ccCCcEEEEecCCeEEEEEecCCCCCCEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRD--GTAI------------TLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQ 67 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~--~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 67 (126)
++.+.+|+++.|.|.+.+.|.+.+.|+++ +..+ ....++.....+....|.|.++...|.|.|.|.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 88 (210)
T 1lk3_L 9 ALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYFCQ 88 (210)
T ss_dssp EEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred cEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEEEEE
Confidence 46788999999999999888889999984 2211 112466655555567899999999999999999
Q ss_pred EecCCceeE-EEEEEEec--CCCCeecc-Cc--ceeCCCeeEEEEEEccCCc
Q psy12132 68 ASNNLGSSQ-QFIQLSGI--PNIPVFQK-SS--RRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 68 ~~~~~~~~~-~~~~l~~~--~~~~~~~~-~~--~~~~~~~~~l~~~~~~~~~ 113 (126)
+.+..+... ....+.+. ..+|.+.. .+ ....+..+.|+|.+.+..|
T Consensus 89 ~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p 140 (210)
T 1lk3_L 89 QSWNGPLTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYP 140 (210)
T ss_dssp ECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBS
T ss_pred EEcCCCceeCCCEEEEEcCCCcCCeEEEECCchhhccCCcEEEEEEEEeEeC
Confidence 998765332 12233332 22343332 11 1235778999999976433
No 102
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.60 E-value=8.9e-14 Score=82.66 Aligned_cols=122 Identities=15% Similarity=0.214 Sum_probs=78.2
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECC-----EEe---------ccCCcEEEEecCCeEEEEEecCCCCCCEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDG-----TAI---------TLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQ 67 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~-----~~~---------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 67 (126)
.+.+.+|+++.|.|.+.+.|.+.+.|++.. ..+ ....++..........|.|.++...|.|.|.|.
T Consensus 13 ~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 92 (250)
T 3esu_F 13 SLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQEDIGTYFCQ 92 (250)
T ss_dssp EEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred EEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChhhCEEEEEE
Confidence 356789999999999999999999999842 111 112456555555567899999999999999999
Q ss_pred EecCCcee-EEEEEEEecCC------------------CC-eecc--CcceeCCCeeEEEEEEccCCcceeEEEEEEE
Q psy12132 68 ASNNLGSS-QQFIQLSGIPN------------------IP-VFQK--SSRRLGPDGYRLVWQVDTYSAIIQYLLKFRE 123 (126)
Q Consensus 68 ~~~~~~~~-~~~~~l~~~~~------------------~~-~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~r~ 123 (126)
+.+..+.. .....|.+... ++ .... ......++.+.|.|...+.+.......|||+
T Consensus 93 ~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~ 170 (250)
T 3esu_F 93 QGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKDSGYAFSSSWMNWVKQ 170 (250)
T ss_dssp ECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEECCSTTGGGSEEEEEEE
T ss_pred EeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEecCCcccCCEEEEEEE
Confidence 98864432 12223333221 11 1111 1224568889999998765422233455665
No 103
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.60 E-value=8.4e-16 Score=81.69 Aligned_cols=84 Identities=14% Similarity=0.181 Sum_probs=64.0
Q ss_pred ceeccCCccEEEEEEeeec---CCCeeEEEECCE-Eecc--CCcEEEEec--C----CeEEEEEecCCCCCCEEEEEEEe
Q psy12132 2 HSITAPDMRAEIICNVYAN---PPAKVEWFRDGT-AITL--GGRIDMHVS--S----EKHSLLVRHIKDTDFGNYMCQAS 69 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~---p~~~~~w~~~~~-~~~~--~~~~~~~~~--~----~~~~l~i~~~~~~d~g~y~C~~~ 69 (126)
++.+.+|+++.|.|.+.+. |.|.+.|+|+.. .+.. ..++.+... . ....|.|.++...|.|.|+|.+.
T Consensus 21 ~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~Cevs 100 (118)
T 2edn_A 21 SVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGDRGYYRLEVK 100 (118)
T ss_dssp CCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTTCSCEEEEEE
T ss_pred CeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhhCEEEEEEEE
Confidence 4678899999999999874 789999999742 1211 234443211 1 14689999999999999999999
Q ss_pred cCCceeEEEEEEEecC
Q psy12132 70 NNLGSSQQFIQLSGIP 85 (126)
Q Consensus 70 ~~~~~~~~~~~l~~~~ 85 (126)
|..|..++.+.|.|..
T Consensus 101 n~~g~~s~~~~L~V~~ 116 (118)
T 2edn_A 101 AKDTCDSCGFNIDVEA 116 (118)
T ss_dssp CSSCEEEEEECCEEEC
T ss_pred EcCCcEEEEEEEEEEc
Confidence 9999988888887753
No 104
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.60 E-value=2.5e-14 Score=87.21 Aligned_cols=109 Identities=20% Similarity=0.324 Sum_probs=79.6
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccC---CcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeE---
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLG---GRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQ--- 76 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~---~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~--- 76 (126)
..+..|+.+.|.|.+.+.|.+.+.|++++..+... .++.....+ .|.|.++...|.|.|+|.+.|..|...
T Consensus 118 ~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 194 (304)
T 2yd9_A 118 KVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRSG---ALQIESSEETDQGKYECVATNSAGVRYSSP 194 (304)
T ss_dssp EEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEECTTS---CEEECSCCGGGCEEEEEEEEETTEEEECCC
T ss_pred EEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEeCCCe---EEEEccCCcccCEEEEEEEEeCCCCEEecc
Confidence 35667999999999999999999999999887543 233333232 799999999999999999999887665
Q ss_pred EEEEEEecCCCCeeccC---cceeCCCeeEEEEEEccCCcc
Q psy12132 77 QFIQLSGIPNIPVFQKS---SRRLGPDGYRLVWQVDTYSAI 114 (126)
Q Consensus 77 ~~~~l~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~ 114 (126)
..+.+.+...+|.+... .....++.+.|.|...+.++.
T Consensus 195 ~~l~v~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p 235 (304)
T 2yd9_A 195 ANLYVRVQNVAPRFSILPMSHEIMPGGNVNITCVAVGSPMP 235 (304)
T ss_dssp EEEEEECCCEEEEEEECCCCBCCCTTCCEEEEEEEEEESCC
T ss_pred EEEEEEeeccCCcEEecCCceEEcCCCeEEEEEEEeeeCCC
Confidence 44555443344444322 223567889999999776543
No 105
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.60 E-value=1.1e-14 Score=91.57 Aligned_cols=109 Identities=17% Similarity=0.293 Sum_probs=81.4
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLS 82 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~ 82 (126)
+.+..|+.+.|.|.+.+.|.+.+.|++++..+...... ... ....|.|.++...|.|.|+|.+.|..|.....+.|.
T Consensus 232 ~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~-~~~--~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 308 (404)
T 3p3y_A 232 QMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAK-FEN--FNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVR 308 (404)
T ss_dssp EEEETTSCEEEECCBCCSSCCEEEEEETTBCCCTTTEE-EEG--GGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEE
T ss_pred ceEecCCCEEEEEEECCCCCCcEEEEECCEECCCCccc-ccc--cCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEE
Confidence 34678999999999999999999999999877544432 221 123899999999999999999999999888888777
Q ss_pred ecCCCCeecc--CcceeCCCeeEEEEEEccCCcc
Q psy12132 83 GIPNIPVFQK--SSRRLGPDGYRLVWQVDTYSAI 114 (126)
Q Consensus 83 ~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~ 114 (126)
+...|..... ......++.+.|.|...+.++.
T Consensus 309 V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p 342 (404)
T 3p3y_A 309 VKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKP 342 (404)
T ss_dssp EEEEEEEEECCCCEEECTTCCEEEECEEEEESCC
T ss_pred EeCCCeeeccCCcceeecCCcEEEEEEccccCCC
Confidence 6543322221 1223457889999999776543
No 106
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.60 E-value=3.4e-14 Score=82.44 Aligned_cols=101 Identities=18% Similarity=0.174 Sum_probs=73.1
Q ss_pred eeccCCccEEEEEEeeecCCCe-eEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAK-VEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~-~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
..+.+|+++.|.|.+.+.|.+. +.|++++..+.... ..|.|.++...|.|.|+|.+.+...+. .+.|
T Consensus 17 ~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~~----------~~L~i~~v~~~D~G~Y~C~a~n~~~s~--~~~l 84 (204)
T 3sgj_C 17 YRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQA----------SSYFIDAATVDDSGEYRCQTQLSTLSD--PVQL 84 (204)
T ss_dssp SEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCCS----------SEEEESSCCGGGCEEEEEEETTSBCCC--CEEE
T ss_pred eEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccCc----------cEEEEecccccCCEEEEEEeCCCcccc--cEEE
Confidence 4678899999999999888775 99999998775432 379999999999999999998854444 3444
Q ss_pred EecCCCCeecc-CcceeCCCeeEEEEEEccCCcce
Q psy12132 82 SGIPNIPVFQK-SSRRLGPDGYRLVWQVDTYSAII 115 (126)
Q Consensus 82 ~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~ 115 (126)
.+...+..... ......++.+.|.|...+..+..
T Consensus 85 ~V~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~p~~ 119 (204)
T 3sgj_C 85 EVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALH 119 (204)
T ss_dssp EEECSSEEEECSCSEEETTCCEEEEEEEGGGCCCE
T ss_pred EEecCceEecCCceeEeCCCcEEEEEEecCCCCCc
Confidence 44333322222 22334688999999997665533
No 107
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.60 E-value=3.7e-14 Score=74.82 Aligned_cols=78 Identities=15% Similarity=0.195 Sum_probs=62.4
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCC----------cEEEEecCCeEEEEEecCCCCCCEEEEEEEecC
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGG----------RIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNN 71 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~----------~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~ 71 (126)
++.+.+|+++.|.|.+.+ .|.+.|+++|..+.... ++.+..++....|.|.++...|.|.|+|...+.
T Consensus 17 d~~v~eG~~a~f~C~vs~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~~~D~G~Y~~~~~~~ 94 (112)
T 2e6q_A 17 DVQVYDGEDAVFSLDLST--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKHQDSGALVGFSCPG 94 (112)
T ss_dssp CEEEETTCEEEEEEEESS--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCBTTEEEEEEESCCSTTCSEEEEEEETT
T ss_pred CeEEcCCCcEEEEEEECC--CCeEEEEECCEECccCcccccccccccEEEEEeCCcEEEEEECCCCHHHCccEEEEEECC
Confidence 567889999999999986 78899999999998776 887777777789999999999999997754432
Q ss_pred CceeEEEEEEEec
Q psy12132 72 LGSSQQFIQLSGI 84 (126)
Q Consensus 72 ~~~~~~~~~l~~~ 84 (126)
......|.|.
T Consensus 95 ---~~ssA~L~V~ 104 (112)
T 2e6q_A 95 ---VQDSAALTIQ 104 (112)
T ss_dssp ---EEEEEEEEEE
T ss_pred ---eeEEEEEEEe
Confidence 2334555554
No 108
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.60 E-value=5.1e-14 Score=81.77 Aligned_cols=111 Identities=17% Similarity=0.307 Sum_probs=75.1
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECC--EEe------------ccCCcEEEEecCCeEEEEEecCCCCCCEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDG--TAI------------TLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQ 67 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~--~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 67 (126)
++.+.+|+++.|.|.+.+.|.+.+.|++++ ..+ ....++.....+....|.|.++...|.|.|+|.
T Consensus 10 ~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 89 (213)
T 3d9a_L 10 TLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQ 89 (213)
T ss_dssp EEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred cEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhCEEEEEe
Confidence 456889999999999998888899999742 111 112466665555667999999999999999999
Q ss_pred EecCCceeE-EEEEEEec--CCCCeecc-Cc--ceeCCCeeEEEEEEccCC
Q psy12132 68 ASNNLGSSQ-QFIQLSGI--PNIPVFQK-SS--RRLGPDGYRLVWQVDTYS 112 (126)
Q Consensus 68 ~~~~~~~~~-~~~~l~~~--~~~~~~~~-~~--~~~~~~~~~l~~~~~~~~ 112 (126)
+.+..+... ....+.+. ..+|.+.. .+ ....++.+.|+|...+..
T Consensus 90 ~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~ 140 (213)
T 3d9a_L 90 QSNSWPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFY 140 (213)
T ss_dssp ECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEB
T ss_pred eecCCcceeCCCEEEEEecCCCCceeEeECCChhhcCCCcEEEEEEEeeec
Confidence 998765432 12233332 22343322 11 123467899999997643
No 109
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.60 E-value=5e-14 Score=81.56 Aligned_cols=112 Identities=17% Similarity=0.272 Sum_probs=77.9
Q ss_pred ceeccCCccEEEEEEeeecC----CCeeEEEE----------------CCEEecc-----CCcEEEEe---cCCeEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANP----PAKVEWFR----------------DGTAITL-----GGRIDMHV---SSEKHSLLV 53 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p----~~~~~w~~----------------~~~~~~~-----~~~~~~~~---~~~~~~l~i 53 (126)
.+.+.+|+++.|.|.+.+.+ .+.+.|++ ++..+.. ..++.+.. ......|.|
T Consensus 9 ~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i 88 (214)
T 3jz7_A 9 RIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASINV 88 (214)
T ss_dssp EEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCEEE
T ss_pred eEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccEEE
Confidence 35788999999999998776 46899988 3333221 23444322 113457999
Q ss_pred ecCCCCCCEEEEEEEecCCceeEEEEEEEecCCCCe--eccCcceeCCCeeEEEEEE-ccCCc
Q psy12132 54 RHIKDTDFGNYMCQASNNLGSSQQFIQLSGIPNIPV--FQKSSRRLGPDGYRLVWQV-DTYSA 113 (126)
Q Consensus 54 ~~~~~~d~g~y~C~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~-~~~~~ 113 (126)
.++...|.|.|+|.+.+..+.....+.|.+...+.. .........++.+.|.|.. .+.++
T Consensus 89 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~ 151 (214)
T 3jz7_A 89 TNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLP 151 (214)
T ss_dssp CSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSCEEEEESCCBTTCCEEEEEECSBCCSS
T ss_pred ccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCceeeeecceecCCcEEEEecCCCCCCC
Confidence 999999999999999998887777777776543332 2222234567889999999 55544
No 110
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.59 E-value=3.4e-14 Score=87.63 Aligned_cols=104 Identities=13% Similarity=0.253 Sum_probs=75.2
Q ss_pred ccCCccEEEEEEeeecC-CCeeEEEECCEEecc-CCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecC--CceeEEE--
Q psy12132 5 TAPDMRAEIICNVYANP-PAKVEWFRDGTAITL-GGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNN--LGSSQQF-- 78 (126)
Q Consensus 5 ~~~g~~~~l~C~~~~~p-~~~~~w~~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~--~~~~~~~-- 78 (126)
+.+|+.+.|.|.+.+.| .+.+.|++++..+.. ..++... . ..|.|.++...|.|.|+|.+.|. .|.....
T Consensus 140 ~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~~-~---~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s 215 (329)
T 3oq3_B 140 THDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQS-G---QNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVS 215 (329)
T ss_dssp SSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEEE-T---TEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEE
T ss_pred EeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEecC-C---CEEEEeecChhhCEEEEEEEEecccCCCceeEEE
Confidence 45699999999999999 899999999988753 3344333 3 38999999999999999999986 4433333
Q ss_pred --EEEEecCCC----Ceecc-CcceeCCCeeEEEEEEccCC
Q psy12132 79 --IQLSGIPNI----PVFQK-SSRRLGPDGYRLVWQVDTYS 112 (126)
Q Consensus 79 --~~l~~~~~~----~~~~~-~~~~~~~~~~~l~~~~~~~~ 112 (126)
+.|.+...+ +.+.. ......++.+.|.|...+.+
T Consensus 216 ~~~~l~V~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p 256 (329)
T 3oq3_B 216 RCKILTVIPSQDHRFKLILDPKINVTIGEPANITCTAVSTS 256 (329)
T ss_dssp EEEEEEEECCCCCCEEEECCSEEEECTTSCEEEEEEEEETT
T ss_pred eeEEEEEECCCCCCCceecCCeeEEecCCCEEEEEEEEECC
Confidence 556654433 33311 12234678899999998776
No 111
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.59 E-value=3.1e-14 Score=93.00 Aligned_cols=102 Identities=12% Similarity=0.039 Sum_probs=75.3
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLS 82 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~ 82 (126)
+.+.+|+.+.|.|.+.+.|.|.+.|++++..+....+.. . ....|.|.++...|.|.|+|.+.|..|.....+.|.
T Consensus 336 ~~v~~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~-~---~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~ 411 (527)
T 3qs9_E 336 YEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGL-D---NGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLN 411 (527)
T ss_dssp ECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBC-S---SSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC
T ss_pred EEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCcccc-c---CCcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEE
Confidence 456789999999999999999999999998886544321 1 234799999999999999999999999888888888
Q ss_pred ecCCCCeeccCcceeCCCeeEEEEEEccCCcc
Q psy12132 83 GIPNIPVFQKSSRRLGPDGYRLVWQVDTYSAI 114 (126)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 114 (126)
|. .+|.+..... ...|.|.+.|.++.
T Consensus 412 V~-~~P~i~~~~~-----~~~l~C~a~g~P~p 437 (527)
T 3qs9_E 412 IR-RKPQVLAEAS-----ASQASCFSDGYPLP 437 (527)
T ss_dssp ---CCCEEEECCC-----CE---EEEECSSCC
T ss_pred Ee-cCCeEEEeCC-----CCEEEEEEEEEcCC
Confidence 75 4444433221 23579999887653
No 112
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.59 E-value=1.2e-13 Score=78.16 Aligned_cols=100 Identities=18% Similarity=0.181 Sum_probs=72.6
Q ss_pred eeccCCccEEEEEEeeecCCCe-eEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAK-VEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~-~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
+.+.+|+++.|.|.+.+.|.+. +.|++++..+... ...|.|.++...|.|.|+|.+.+..++... .+
T Consensus 17 ~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~~----------~~~L~i~~~~~~d~G~Y~C~~~n~~~s~~~--~l 84 (175)
T 1fnl_A 17 YSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQ----------ASSYFIDAATVNDSGEYRCQTNLSTLSDPV--QL 84 (175)
T ss_dssp SEEETTCCEEEEEECCCBTTBCCCEEEETTEEEESS----------CSEEEESSCCGGGCEEEEEECSSSCCCCCE--EE
T ss_pred eeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccCC----------ceEEEEeCCCcccCEEEEEEeeCCcccccE--EE
Confidence 4678899999999999888775 7899999776532 237999999999999999999986554444 44
Q ss_pred EecCCCCeecc-CcceeCCCeeEEEEEEccCCcc
Q psy12132 82 SGIPNIPVFQK-SSRRLGPDGYRLVWQVDTYSAI 114 (126)
Q Consensus 82 ~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~ 114 (126)
.+...++.... ......++.+.|.|...+.++.
T Consensus 85 ~V~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~ 118 (175)
T 1fnl_A 85 EVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTAL 118 (175)
T ss_dssp EEECSSEEEECSCSEEETTCCEEEEEEECTTCCC
T ss_pred EEeCCCceeeCCCceecCCCCEEEEEEcCCCCCc
Confidence 44333322222 2223468889999999777654
No 113
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.59 E-value=1.9e-14 Score=82.74 Aligned_cols=106 Identities=10% Similarity=0.119 Sum_probs=72.9
Q ss_pred eccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCc--eeEEEEEE
Q psy12132 4 ITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLG--SSQQFIQL 81 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~--~~~~~~~l 81 (126)
.+.+|+++.|.|.+.+ +.+.+.|+|++..+..... ..........|.|.++...|.|.|+|.+.|..| .....+.+
T Consensus 15 ~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~-~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l 92 (196)
T 3p2t_A 15 VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDRQ-NPLEPKNKARFSIPSMTEDYAGRYRCYYRSPVGWSQPSDPLEL 92 (196)
T ss_dssp EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEEE-CCCSSSSEEEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEE
T ss_pred cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCccccc-ccccCCceEEEEeccCCcccCceEEEEEeCCCcccCCCccEEE
Confidence 4678999999999987 7789999999876542111 011112346899999999999999999999876 22444555
Q ss_pred Eec--CCCCeeccCc--ceeCCCeeEEEEEEccC
Q psy12132 82 SGI--PNIPVFQKSS--RRLGPDGYRLVWQVDTY 111 (126)
Q Consensus 82 ~~~--~~~~~~~~~~--~~~~~~~~~l~~~~~~~ 111 (126)
.+. ..+|.+...+ ....++.+.|.|...+.
T Consensus 93 ~V~~~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~ 126 (196)
T 3p2t_A 93 VMTGAYSKPTLSALPSPLVTSGKSVTLLCQSRSP 126 (196)
T ss_dssp EEECSSCCCEEEEESCSEECTTCCEEEEEEEEEE
T ss_pred EecCCCCCCEEEeCCcceecCCCeEEEEEecCCC
Confidence 543 3344443322 23568889999988663
No 114
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.59 E-value=1.7e-13 Score=78.33 Aligned_cols=81 Identities=21% Similarity=0.333 Sum_probs=67.8
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEE--CCEEec---cCCcEEEEecCCeEEEEEecCC-CCCCEEEEEEEecCCceeE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFR--DGTAIT---LGGRIDMHVSSEKHSLLVRHIK-DTDFGNYMCQASNNLGSSQ 76 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~--~~~~~~---~~~~~~~~~~~~~~~l~i~~~~-~~d~g~y~C~~~~~~~~~~ 76 (126)
..+..|+.+.|.|.+.+.|.|.+.|++ ++..+. ...++.....+....|.|.++. ..|.|.|+|.+.|..|...
T Consensus 102 ~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~ 181 (190)
T 2wv3_A 102 ENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYECNATNSIGSAS 181 (190)
T ss_dssp EEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEECSSEEEEEECSCCTTTSCEEEEEEEECSSCEEE
T ss_pred ceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEecCCCeeEEEEEeccccCCCEEEEEEEEecCCcce
Confidence 456789999999999999999999999 777654 3456666665556689999999 7999999999999999888
Q ss_pred EEEEEEe
Q psy12132 77 QFIQLSG 83 (126)
Q Consensus 77 ~~~~l~~ 83 (126)
..+.|.+
T Consensus 182 ~~~~l~V 188 (190)
T 2wv3_A 182 VSTVLRV 188 (190)
T ss_dssp EEEEEEE
T ss_pred eEEEEEE
Confidence 8877765
No 115
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.59 E-value=3.8e-14 Score=90.34 Aligned_cols=108 Identities=14% Similarity=0.153 Sum_probs=74.5
Q ss_pred eeccCCccEEEEEEeee-cCCCeeEEEECCEEeccCCcEEEEe------cCCeEEEEEecCCCCCCEEEEEEEecCCcee
Q psy12132 3 SITAPDMRAEIICNVYA-NPPAKVEWFRDGTAITLGGRIDMHV------SSEKHSLLVRHIKDTDFGNYMCQASNNLGSS 75 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~-~p~~~~~w~~~~~~~~~~~~~~~~~------~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 75 (126)
..+.+|+++.|.|.+.+ .|.|.+.|++++..+.....+.... ......|.|.++...|.|.|+|.+.|. .
T Consensus 237 ~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~---~ 313 (423)
T 3qs7_E 237 LFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---P 313 (423)
T ss_dssp EEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE---E
T ss_pred eEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC---C
Confidence 45678999999999998 6779999999987664432221110 011237999999999999999999997 5
Q ss_pred EEEEEEEecCCCCeeccC----cceeCCCeeEEEEEEccCCc
Q psy12132 76 QQFIQLSGIPNIPVFQKS----SRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 76 ~~~~~l~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~ 113 (126)
...+.|.|...+...... .....++.+.|.|.+.+.++
T Consensus 314 ~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~ 355 (423)
T 3qs7_E 314 SQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQ 355 (423)
T ss_dssp EEEEEEEEESSCEEEEC---CEECCCTTCCCCEEEEEEEESC
T ss_pred CceEEEEEEeCCcceEcCCCccEEecCCCeEEEEEEEEEcCC
Confidence 555556654333222111 22345778999999988765
No 116
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.59 E-value=1.8e-13 Score=83.44 Aligned_cols=109 Identities=15% Similarity=0.184 Sum_probs=81.8
Q ss_pred eeccCCccEEEEEEee-ecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 3 SITAPDMRAEIICNVY-ANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~-~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
+.+.+|+++.|.|... +.|.+.+.|++++..+....++.+...+....|.|.++...|.|.|+|.+.|..|... .+.+
T Consensus 11 ~~v~eg~~v~l~~~~~~~~p~~~v~W~k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~-s~~l 89 (312)
T 2y23_A 11 VNVDDDGVISLNFECDKMTPKSEFSWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIAS-SYLI 89 (312)
T ss_dssp EEECTTCCEEEEEECSSCCTTCCEEEEETTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCE-EEEE
T ss_pred EEEecCCeEEEEEEEeCCCCCcEEEEEECCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEE-EEEE
Confidence 5677899999999885 5788999999999998877788777766677999999999999999999999877444 4445
Q ss_pred EecC------------CCCeecc---CcceeCCCeeEEEEEEc-cCC
Q psy12132 82 SGIP------------NIPVFQK---SSRRLGPDGYRLVWQVD-TYS 112 (126)
Q Consensus 82 ~~~~------------~~~~~~~---~~~~~~~~~~~l~~~~~-~~~ 112 (126)
.+.. .|..... ......++.+.|.|... +.+
T Consensus 90 ~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p 136 (312)
T 2y23_A 90 DEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSG 136 (312)
T ss_dssp CHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCS
T ss_pred EEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCC
Confidence 5421 2221111 23345678899999997 444
No 117
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.59 E-value=1.3e-14 Score=90.82 Aligned_cols=98 Identities=16% Similarity=0.177 Sum_probs=66.0
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccC----CcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLG----GRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQ 77 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~----~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 77 (126)
++.+.+|+++.|.|.+.| |.|.+.|++++..+... .++.. .++ .|.|.+++..|.|.|+|.+.|..|...+
T Consensus 255 ~v~v~~G~~~~l~C~~~g-p~p~i~W~~~~~~~~~~~~~~~r~~~-~~~---~L~I~~v~~~D~G~Y~C~a~N~~g~~~~ 329 (361)
T 2xot_A 255 AWEAHLGDTLTIRCDTKQ-QGMTKVWVSPSNEQVLSQGSNGSVSV-RNG---DLFFKKVQVEDGGVYTCYAMGETFNETL 329 (361)
T ss_dssp CCEEETTCCEEECCCCSS-TTCEEEEECTTSCBCCSCCSSSSEEE-ETT---EEEESSCCTTSCEEEEEEEECSSCEEEE
T ss_pred CceecCCCeEEEEeEeeC-CCCeEEEEeCCCeeEeecccCCceEe-ecC---eEEEeecCcccCEEEEEEEecCCCccEE
Confidence 457889999999999998 99999999976543221 25555 444 7999999999999999999999999988
Q ss_pred EEEEEecCCCCeeccCcceeCCCeeEEEEEEccCCc
Q psy12132 78 FIQLSGIPNIPVFQKSSRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 78 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 113 (126)
.+.+.|...+ ..+..+.+.|.+.|.++
T Consensus 330 ~~~l~V~~~~---------~~g~~~~l~C~~~g~P~ 356 (361)
T 2xot_A 330 SVELKVYNFT---------LHGHHDTLNAAADPWSH 356 (361)
T ss_dssp EEEEEEESSC---------CC---------------
T ss_pred EEEEEEEeee---------ccCCceEEEEEeCCCCC
Confidence 8888875322 35557889999877754
No 118
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.59 E-value=3.8e-14 Score=86.58 Aligned_cols=82 Identities=18% Similarity=0.408 Sum_probs=71.3
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEec-CCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVS-SEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
+.+..|+.+.|.|.+.+.|.|.+.|++++..+....++.+... +....|.|.++...|.|.|+|.+.|..|.....+.|
T Consensus 232 ~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l 311 (317)
T 2y25_A 232 VTIQEGKALNLTCNVWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTV 311 (317)
T ss_dssp EEEETTSBBCEEEEEECSSCCEEEEEESSSEECCCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEcCCEEEEEEEEecCCCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCCeEEEEEEE
Confidence 4677899999999999999999999999988877777766554 556789999999999999999999999998888888
Q ss_pred Eec
Q psy12132 82 SGI 84 (126)
Q Consensus 82 ~~~ 84 (126)
.+.
T Consensus 312 ~V~ 314 (317)
T 2y25_A 312 SVF 314 (317)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 119
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.59 E-value=2.1e-14 Score=76.88 Aligned_cols=83 Identities=13% Similarity=0.104 Sum_probs=60.9
Q ss_pred eeccCCccEEEEEEeeecC--CCeeEEEECCEEecc-----CCcEEEEec---CCeEEEEEecCCCCCCEEEEEEEecCC
Q psy12132 3 SITAPDMRAEIICNVYANP--PAKVEWFRDGTAITL-----GGRIDMHVS---SEKHSLLVRHIKDTDFGNYMCQASNNL 72 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p--~~~~~w~~~~~~~~~-----~~~~~~~~~---~~~~~l~i~~~~~~d~g~y~C~~~~~~ 72 (126)
+.+.+|+++.|.|.+.+.| .+.+.|++++..+.. ......... .....|.|.++...|.|.|+|.+.|..
T Consensus 18 v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~ 97 (122)
T 3s35_X 18 IELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGL 97 (122)
T ss_dssp EEEEETCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEEEECSS
T ss_pred EEEecCCeEEEEEEEEcCCCCcEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEEEEccCC
Confidence 4677899999999999844 568899998763321 111111111 123479999999999999999999999
Q ss_pred ceeEEEEEEEecC
Q psy12132 73 GSSQQFIQLSGIP 85 (126)
Q Consensus 73 ~~~~~~~~l~~~~ 85 (126)
|...+.+.|.|..
T Consensus 98 g~~~~~~~l~V~~ 110 (122)
T 3s35_X 98 MTKKNSTFVRVHE 110 (122)
T ss_dssp CEEEEEEEEEEEE
T ss_pred CceEEEEEEEEec
Confidence 9888888887753
No 120
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.58 E-value=1e-14 Score=94.81 Aligned_cols=108 Identities=14% Similarity=0.092 Sum_probs=80.6
Q ss_pred eeccCCccEEEEEEeeecCCCe-eEEEECCEEeccCC-cEEEEecC----CeEEEEEecCCCCCCEEEEEEEecCCceeE
Q psy12132 3 SITAPDMRAEIICNVYANPPAK-VEWFRDGTAITLGG-RIDMHVSS----EKHSLLVRHIKDTDFGNYMCQASNNLGSSQ 76 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~-~~w~~~~~~~~~~~-~~~~~~~~----~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 76 (126)
+.+.+|+.+.|.|.+.+.|.|. +.|++++..+.... ++...... ....|.|.++...|.|.|+|.+.|..|...
T Consensus 323 ~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~ 402 (524)
T 2ec8_A 323 VFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAA 402 (524)
T ss_dssp EEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEEE
T ss_pred EEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCceEE
Confidence 5678899999999999999998 99999998776443 33322222 245899999999999999999999999988
Q ss_pred EEEEEEecCCCCeeccCcceeCCCeeEEEEEEccCCcc
Q psy12132 77 QFIQLSGIPNIPVFQKSSRRLGPDGYRLVWQVDTYSAI 114 (126)
Q Consensus 77 ~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 114 (126)
..+.|.+.. +|.+........+ .|.|.+.|.++.
T Consensus 403 ~~~~l~V~~-~P~i~~~~~~~~g---~l~C~~~g~P~p 436 (524)
T 2ec8_A 403 IAFNVYVNT-KPEILTYDRLVNG---MLQCVAAGFPEP 436 (524)
T ss_dssp EEEEEEECE-EEEEEEEECCSSS---CEEEEEEEESCC
T ss_pred EEEEEEEec-CCeEeecccCcCc---EEEEEEEeecCC
Confidence 888888753 3333332222222 899999776553
No 121
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.58 E-value=1.5e-14 Score=75.16 Aligned_cols=67 Identities=19% Similarity=0.512 Sum_probs=58.6
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEec
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASN 70 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~ 70 (126)
+.+.+|+++.|.|.+. .|.+.+.|++++..+....++.+...+....|.|.++...|.|.|+|.+.+
T Consensus 21 ~~v~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~ 87 (102)
T 2eo1_A 21 VQAEAGASATLSCEVA-QAQTEVTWYKDGKKLSSSSKVRVEAVGCTRRLVVQQAGQAEAGEYSCEAGG 87 (102)
T ss_dssp EEEETTCCEEECCBCS-CSSSCCEEEETTEECCCCSSEEEEEETTEEEEEETTCCTTTCSCEEEEETT
T ss_pred EEEeCCCcEEEEEEec-CCCCceEEEECCEECCCCCCEEEEEcCCEEEEEECCCCcccCEEEEEEcCC
Confidence 4677899999999998 888999999999988777777777666667999999999999999999865
No 122
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.58 E-value=6.4e-14 Score=81.30 Aligned_cols=108 Identities=19% Similarity=0.224 Sum_probs=74.5
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEEC--CEEec------------cCCcEEEEecCCeEEEEEecCCCCCCEEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRD--GTAIT------------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQA 68 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~--~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 68 (126)
+.+.+|+++.|.|.+. +.+.+.|+++ +..+. ...++..........|.|.++...|.|.|.|.+
T Consensus 10 ~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 87 (211)
T 3tv3_L 10 ASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEAVYYCGS 87 (211)
T ss_dssp EEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCEEEEEEE
T ss_pred EEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCEEEEEEE
Confidence 5678999999999998 8889999983 21111 224666555556678999999999999999999
Q ss_pred ecCCc--eeEEEEEEEecC---CCCeeccCc---ceeCCCeeEEEEEEccCC
Q psy12132 69 SNNLG--SSQQFIQLSGIP---NIPVFQKSS---RRLGPDGYRLVWQVDTYS 112 (126)
Q Consensus 69 ~~~~~--~~~~~~~l~~~~---~~~~~~~~~---~~~~~~~~~l~~~~~~~~ 112 (126)
.+..+ .......|.+.. .+|.+...+ ....++.+.|.|.+.+..
T Consensus 88 ~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~ 139 (211)
T 3tv3_L 88 LVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFY 139 (211)
T ss_dssp EETTTEEEECCCEEEEECCSCCBCCEEEEECCCHHHHHTTCEEEEEEEEEEB
T ss_pred ecCCCceeECCCceEEEeCCCCcCCeeEecCCchhhhcCCCeEEEEEeeeec
Confidence 98776 333444555432 233332211 112478899999997653
No 123
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.58 E-value=3.5e-14 Score=73.22 Aligned_cols=76 Identities=22% Similarity=0.386 Sum_probs=60.0
Q ss_pred eeccCCccEEEEEEee-ecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 3 SITAPDMRAEIICNVY-ANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~-~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
+.+.+|+++.|.|.+. +.|.+.+.|++++....... . ....+ .|.|.++...|.|.|+|.+.|..|.....+.|
T Consensus 20 ~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~~~-~-~~~~~---~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l 94 (98)
T 1gl4_B 20 QSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPSR-A-MDFNG---ILTIRNVQPSDAGTYVCTGSNMFAMDQGTATL 94 (98)
T ss_dssp EEECTTCCEEEEEEEEESSSCCEEEEEEGGGBCCCTT-E-EEETT---EEEECSCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred eEEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCCCce-e-ecCCC---EEEEeCCChhhCEEEEEEecCCCCccccEEEE
Confidence 5678999999999998 68899999999753332222 1 22233 79999999999999999999999888877777
Q ss_pred Ee
Q psy12132 82 SG 83 (126)
Q Consensus 82 ~~ 83 (126)
.+
T Consensus 95 ~V 96 (98)
T 1gl4_B 95 HV 96 (98)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 124
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.58 E-value=3.3e-14 Score=89.29 Aligned_cols=112 Identities=21% Similarity=0.273 Sum_probs=80.2
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCC--cEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEE-EE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGG--RIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQ-FI 79 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~-~~ 79 (126)
+.+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ++..........|.|.++...|.|.|+|.+.|..|.... .+
T Consensus 222 ~~~~~G~~v~l~C~~~g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 301 (395)
T 1bih_A 222 MMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSL 301 (395)
T ss_dssp EEEETTSCEEEEEEEECSSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEE
T ss_pred eEEECCCcEEEEEEeccCCCCeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEE
Confidence 456789999999999999999999999998876432 222221222347999999999999999999998887554 66
Q ss_pred EEEecCCCCeeccC---cceeCCCeeEEEEEEccCCcc
Q psy12132 80 QLSGIPNIPVFQKS---SRRLGPDGYRLVWQVDTYSAI 114 (126)
Q Consensus 80 ~l~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~ 114 (126)
.|.+...|...... .....++.+.|.|...+.++.
T Consensus 302 ~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p 339 (395)
T 1bih_A 302 KLTVVSAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAP 339 (395)
T ss_dssp EEEEEEEEEEEECCCSEEEECTTSCEEEECEEEEESCC
T ss_pred EEEEEcCCccccCCCcceEecCCCeEEEEEEECcccCC
Confidence 66654322222221 223567889999999776543
No 125
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.58 E-value=5.2e-14 Score=80.97 Aligned_cols=107 Identities=12% Similarity=0.141 Sum_probs=67.8
Q ss_pred eccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCcee--EEEEEE
Q psy12132 4 ITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSS--QQFIQL 81 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~--~~~~~l 81 (126)
.+.+|+++.|.|.+.+.|. .+.|+|++..+..... ..........|.|.++...|.|.|+|.+.|..|.. ...+.|
T Consensus 15 ~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~-~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l 92 (196)
T 2d3v_A 15 VISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQ-NPLEPKNKARFSIPSMTEHHAGRYRCYYYSPAGWSEPSDPLEL 92 (196)
T ss_dssp EEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEE-CCCSSTTEEEEEESSCCGGGCEEEEEEEEETTEECBCCCCEEE
T ss_pred cccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccc-cccCCccccEEEeccCChhHCeEEEEEEeCCCCcCCcCccEEE
Confidence 5678999999999987655 9999999876532110 00112234689999999999999999998876532 234445
Q ss_pred EecC--CCCeeccCc--ceeCCCeeEEEEEEccCC
Q psy12132 82 SGIP--NIPVFQKSS--RRLGPDGYRLVWQVDTYS 112 (126)
Q Consensus 82 ~~~~--~~~~~~~~~--~~~~~~~~~l~~~~~~~~ 112 (126)
.+.. .+|.+...+ ....++.+.|.|...+.+
T Consensus 93 ~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~~p 127 (196)
T 2d3v_A 93 VVTGFYNKPTLSALPSPVVTSGENVTLQCGSRLRF 127 (196)
T ss_dssp EEECSSCCCEEEC-----------CEEEEEESSCC
T ss_pred EecCCCCCCeEEccCCccccCCCcEEEEEEcCCCC
Confidence 4432 234433322 235678899999997765
No 126
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.58 E-value=8.9e-14 Score=79.97 Aligned_cols=109 Identities=15% Similarity=0.142 Sum_probs=74.1
Q ss_pred ceeccCCccEEEEEEeee-cCCCeeEEEECCEEec---cC---------------CcEEEEecCCeEEEEEecCCCCCCE
Q psy12132 2 HSITAPDMRAEIICNVYA-NPPAKVEWFRDGTAIT---LG---------------GRIDMHVSSEKHSLLVRHIKDTDFG 62 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~-~p~~~~~w~~~~~~~~---~~---------------~~~~~~~~~~~~~l~i~~~~~~d~g 62 (126)
.+.+.+|+++.|.|.+.+ .+.+.+.|++++..+. .. .++.+. .+..|.|.+++..|.|
T Consensus 7 ~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~---~~~sL~I~~v~~~D~G 83 (193)
T 2if7_A 7 MVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFT---QSYSLQLSNLKMEDTG 83 (193)
T ss_dssp EEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEEC---TTCCEEECSCCGGGCE
T ss_pred EEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEEC---CCeEEEECCCCcccCc
Confidence 467789999999999875 4456899999876432 10 133332 2347999999999999
Q ss_pred EEEEEEecCCceeEEEEEEEecCCC--CeeccCcc-eeCCC-eeEEEEEEccCCc
Q psy12132 63 NYMCQASNNLGSSQQFIQLSGIPNI--PVFQKSSR-RLGPD-GYRLVWQVDTYSA 113 (126)
Q Consensus 63 ~y~C~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~-~~~~~-~~~l~~~~~~~~~ 113 (126)
.|.|.+.+..+.....+.|.|...+ |.+..... ...+. .+.|+|.+.+.++
T Consensus 84 ~Y~C~~~~~~~~~~~~~~L~V~~~~~~p~i~~~~~~~~~g~~~v~L~C~~~g~~p 138 (193)
T 2if7_A 84 SYRAQISTKTSAKLSSYTLRILRQLRNIQVTNHSQLFQNMTCELHLTCSVEDADD 138 (193)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCEEEEEEECCC---CSSEEEEEEEEEESCCT
T ss_pred eEEEEEEecCCCeEEEEEEEEEccCCCCeEecCceeecCCCceEEEEEEEecCCC
Confidence 9999999987766666777765433 22222221 12343 6999999977543
No 127
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.57 E-value=6.7e-14 Score=75.19 Aligned_cols=85 Identities=13% Similarity=0.230 Sum_probs=64.9
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEE-ec-------cCCcEEEEe-cCCeEEEEEecCCCCCCEEEEEEEecCC
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTA-IT-------LGGRIDMHV-SSEKHSLLVRHIKDTDFGNYMCQASNNL 72 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~-~~-------~~~~~~~~~-~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 72 (126)
++.+.+|+++.|.|.+.+.|.+.+.|++.+.. +. ...++.... ......|.|.+++..|.|.|+|.+.+.
T Consensus 10 ~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~- 88 (124)
T 3rbg_A 10 TITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLHYSD- 88 (124)
T ss_dssp EEEEETTSCEEEEEECCCCTTCEEEEECTTSCEEEETTEECSCSSCCEEEEEETTEEEEEESSCCGGGCEEEEEEEESS-
T ss_pred cEEEcCCCCEEEEeEEeccCCCEEEEECCCCeEEEEeccccccCCcEEEEeCCCCEEEEEECCCChHHCEEEEEEEEcC-
Confidence 46788999999999999989999999975432 21 334444432 223468999999999999999999998
Q ss_pred ceeEEEEEEEecCCC
Q psy12132 73 GSSQQFIQLSGIPNI 87 (126)
Q Consensus 73 ~~~~~~~~l~~~~~~ 87 (126)
+.....+.|.|...|
T Consensus 89 g~~~~~~~l~V~~~P 103 (124)
T 3rbg_A 89 SVSTKEVKVIVLATM 103 (124)
T ss_dssp SEEEEEEEEEEECC-
T ss_pred CCCcEEEEEEEEeCC
Confidence 888888888775444
No 128
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.57 E-value=3.6e-14 Score=80.82 Aligned_cols=109 Identities=16% Similarity=0.229 Sum_probs=71.3
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEecc--CCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeE--E
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITL--GGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQ--Q 77 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~--~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~--~ 77 (126)
++.+.+|+++.|.|.+.+.|.+.+.|++++..+.. ..++....++ .|.|.++...|.|.|+|.+.+..+... .
T Consensus 11 ~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~ 87 (189)
T 2v5t_A 11 PQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANN---NLQILNINKSDEGIYRCEGRVEARGEIDFR 87 (189)
T ss_dssp SEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECTTS---CEEETTCCGGGCEEEEEEEEETTTTEEEEE
T ss_pred CEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEecCC---CEEEeeCCHhHCcEEEEEEEEcCCCceEEE
Confidence 45678899999999999989999999998876653 3455444333 699999999999999999988754332 3
Q ss_pred EEEEEecCCCCeeccC----cceeCCCeeEEEEEEccCCc
Q psy12132 78 FIQLSGIPNIPVFQKS----SRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 78 ~~~l~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~ 113 (126)
.+.+.+...+...... .....++.+.|.|...+.++
T Consensus 88 ~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~ 127 (189)
T 2v5t_A 88 DIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPE 127 (189)
T ss_dssp EEEEEEEEEEEEECSCCEEEEETTSCCCEEEECEEEEESC
T ss_pred EEEEEecCCCCcccccccccccccCCCcEEEEEEEccCCC
Confidence 3334332222111111 12235778999999976644
No 129
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.57 E-value=7.7e-14 Score=79.87 Aligned_cols=82 Identities=16% Similarity=0.279 Sum_probs=70.5
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCC-CCCEEEEEEEecCCceeEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKD-TDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~-~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
..+..|+.+.|.|.+.+.|.|.+.|++++..+....++..........|.|.++.. .|.|.|+|.+.|..|.....+.|
T Consensus 113 ~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 192 (197)
T 3lcy_A 113 YYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDV 192 (197)
T ss_dssp EEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECSSEEEEEESSCCHHHHCEEEEEEEECSSCEEEEEEEE
T ss_pred eeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCCCceEEEEcCCEEEEEEccccchhhCceEEEEEEcCcCceEEEEEE
Confidence 34567999999999999999999999999988877777776665567899999985 89999999999999998888877
Q ss_pred Eec
Q psy12132 82 SGI 84 (126)
Q Consensus 82 ~~~ 84 (126)
.+.
T Consensus 193 ~V~ 195 (197)
T 3lcy_A 193 EIQ 195 (197)
T ss_dssp EEE
T ss_pred EEe
Confidence 764
No 130
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.57 E-value=6e-13 Score=79.62 Aligned_cols=112 Identities=13% Similarity=0.214 Sum_probs=75.8
Q ss_pred ceeccCCccEEEEEEeeecC--CCeeEEEEC--CEEe---c--------------cCCcEEEEec--CCeEEEEEecCCC
Q psy12132 2 HSITAPDMRAEIICNVYANP--PAKVEWFRD--GTAI---T--------------LGGRIDMHVS--SEKHSLLVRHIKD 58 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p--~~~~~w~~~--~~~~---~--------------~~~~~~~~~~--~~~~~l~i~~~~~ 58 (126)
++.+.+|+++.|.|.+.+.| .+.+.|+++ +..+ . ...++.+..+ .....|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 88 (256)
T 1nqb_A 9 AELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSLTS 88 (256)
T ss_dssp CEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECcCCh
Confidence 46788999999999998775 578999984 2111 0 1246655543 3456899999999
Q ss_pred CCCEEEEEEEecCCce-----eEEEEEEEecCCCCeeccC--cceeCCCeeEEEEEEccCCc
Q psy12132 59 TDFGNYMCQASNNLGS-----SQQFIQLSGIPNIPVFQKS--SRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 59 ~d~g~y~C~~~~~~~~-----~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~ 113 (126)
.|.|.|.|.+.+..|. ....+.|.+...+.....+ .....++.+.|.|...+.++
T Consensus 89 ~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~ 150 (256)
T 1nqb_A 89 EDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQTPLSLPVSLGDQASISCRSSQSIV 150 (256)
T ss_dssp GGCEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEEECSEEEECTTCCEEEEEEESSCCB
T ss_pred hhCEEEEEEEeeccCccceeEEcCceeeeecccccEEecCcEEEEecCCcEEEEeEecCccc
Confidence 9999999999987552 1223455554333222211 22457889999999977654
No 131
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.57 E-value=8.5e-14 Score=81.31 Aligned_cols=104 Identities=16% Similarity=0.228 Sum_probs=75.2
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCcee-EEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSS-QQFIQ 80 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~-~~~~~ 80 (126)
++.+.+|+++.|.|.+.+.|.+.+.|++++..+.... ...|.|.++...|.|.|+|.+.+..+.. ...+.
T Consensus 27 ~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~---------~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~s~~~~ 97 (218)
T 3k0w_A 27 SKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGN---------TSELIFNAVHVKDAGFYVCRVNNNFTFEFSQWSQ 97 (218)
T ss_dssp CEEEETTSBEEEECEETTTTSSEEEEEETTEECTTCC---------SSEEEETTCCGGGCEEEEEEEECTTCCEECCCEE
T ss_pred CeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCCC---------CCEEEEccCChhhCeEeEEEEEcCCCCceeeEEE
Confidence 4667899999999999999999999999998765432 2379999999999999999999886643 33344
Q ss_pred EEecCCC--------------CeeccC---cceeCCCeeEEEEEEccCCcc
Q psy12132 81 LSGIPNI--------------PVFQKS---SRRLGPDGYRLVWQVDTYSAI 114 (126)
Q Consensus 81 l~~~~~~--------------~~~~~~---~~~~~~~~~~l~~~~~~~~~~ 114 (126)
+.+...+ |.+... .....++.+.|.|...+.++.
T Consensus 98 l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~ 148 (218)
T 3k0w_A 98 LDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIP 148 (218)
T ss_dssp EEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCC
T ss_pred EEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEecccCCC
Confidence 4443221 222221 223467789999999776543
No 132
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.57 E-value=5e-13 Score=79.89 Aligned_cols=120 Identities=17% Similarity=0.224 Sum_probs=77.4
Q ss_pred ceeccCCccEEEEEEeeecC--CCeeEEEEC--CE---Eec-------------cCCcEEEEec--CCeEEEEEecCCCC
Q psy12132 2 HSITAPDMRAEIICNVYANP--PAKVEWFRD--GT---AIT-------------LGGRIDMHVS--SEKHSLLVRHIKDT 59 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p--~~~~~w~~~--~~---~~~-------------~~~~~~~~~~--~~~~~l~i~~~~~~ 59 (126)
.+.+.+|+++.|.|.+.+.| .+.+.|+++ +. .+. ...++.+..+ .....|.|.+++..
T Consensus 9 ~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 88 (257)
T 1f3r_B 9 PGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQTD 88 (257)
T ss_dssp CSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCCTT
T ss_pred CccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCcc
Confidence 35678999999999998875 678999985 21 110 1346665543 34568999999999
Q ss_pred CCEEEEEEEecCCc-------ee--EEEEEEEecCCC--------------CeeccCc---ceeCCCeeEEEEEEccCCc
Q psy12132 60 DFGNYMCQASNNLG-------SS--QQFIQLSGIPNI--------------PVFQKSS---RRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 60 d~g~y~C~~~~~~~-------~~--~~~~~l~~~~~~--------------~~~~~~~---~~~~~~~~~l~~~~~~~~~ 113 (126)
|.|.|.|.+.+..| .. .....|.+...+ +.+...+ ....++.+.|.|...+.++
T Consensus 89 DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~ 168 (257)
T 1f3r_B 89 DTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKGSQNIN 168 (257)
T ss_dssp CCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEECSSCCB
T ss_pred cCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEEECCcCC
Confidence 99999999998743 11 122344443321 1122211 2346788999999877654
Q ss_pred ceeEEEEEEE
Q psy12132 114 IIQYLLKFRE 123 (126)
Q Consensus 114 ~~~~~~~~r~ 123 (126)
. ...|||+
T Consensus 169 ~--~v~W~k~ 176 (257)
T 1f3r_B 169 N--YLAWYQQ 176 (257)
T ss_dssp T--CEEEEEE
T ss_pred C--cEEEEEE
Confidence 3 2445553
No 133
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.57 E-value=3.1e-13 Score=80.20 Aligned_cols=120 Identities=12% Similarity=0.181 Sum_probs=77.9
Q ss_pred ceeccCCccEEEEEEeeecC--CCeeEEEECC--EE---e--------------ccCCcEEEEec--CCeEEEEEecCCC
Q psy12132 2 HSITAPDMRAEIICNVYANP--PAKVEWFRDG--TA---I--------------TLGGRIDMHVS--SEKHSLLVRHIKD 58 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p--~~~~~w~~~~--~~---~--------------~~~~~~~~~~~--~~~~~l~i~~~~~ 58 (126)
++.+.+|+++.|.|.+.+.| .+.+.|+++. .. + ....++.+..+ .....|.|.++..
T Consensus 11 ~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 90 (247)
T 2ghw_B 11 GGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRA 90 (247)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCCH
Confidence 46788999999999999877 5789999832 11 1 01246655543 3456899999999
Q ss_pred CCCEEEEEEEecCCce--eEEEEEEEecCC--------------CCeeccCc---ceeCCCeeEEEEEEccCCcceeEEE
Q psy12132 59 TDFGNYMCQASNNLGS--SQQFIQLSGIPN--------------IPVFQKSS---RRLGPDGYRLVWQVDTYSAIIQYLL 119 (126)
Q Consensus 59 ~d~g~y~C~~~~~~~~--~~~~~~l~~~~~--------------~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~ 119 (126)
.|.|.|.|.+.+..+. ......|.+... ++.+...+ ....++.+.|.|...+.++.. ..
T Consensus 91 ~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~--v~ 168 (247)
T 2ghw_B 91 EDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRASQSVRSN--LA 168 (247)
T ss_dssp GGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEESSCCTTC--EE
T ss_pred HHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeCCCccce--EE
Confidence 9999999999987322 122234444322 22222211 245788999999997775432 34
Q ss_pred EEEE
Q psy12132 120 KFRE 123 (126)
Q Consensus 120 ~~r~ 123 (126)
|||.
T Consensus 169 W~k~ 172 (247)
T 2ghw_B 169 WYQQ 172 (247)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5553
No 134
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.57 E-value=9.8e-14 Score=81.70 Aligned_cols=111 Identities=15% Similarity=0.293 Sum_probs=74.6
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECC--E---Ee---------ccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDG--T---AI---------TLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQA 68 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~--~---~~---------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 68 (126)
+.+.+|+++.|.|.+.+.+.+.+.|++.. . .+ ....++..........|.|.+++..|.|.|.|.+
T Consensus 34 ~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 113 (237)
T 3sob_L 34 LSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQ 113 (237)
T ss_dssp EEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred EEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCChhhCeEEEEee
Confidence 56788999999999998888899999832 1 11 1134666555556778999999999999999999
Q ss_pred ecCCce---eEEEEEEEecCCCCeecc-Cc--ceeCCCeeEEEEEEccCCc
Q psy12132 69 SNNLGS---SQQFIQLSGIPNIPVFQK-SS--RRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 69 ~~~~~~---~~~~~~l~~~~~~~~~~~-~~--~~~~~~~~~l~~~~~~~~~ 113 (126)
.+..+. ....+.+.....+|.+.. .. ....++.+.|+|.+.+..|
T Consensus 114 ~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p 164 (237)
T 3sob_L 114 SYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYP 164 (237)
T ss_dssp CSSSSCEECCCEEEEEECCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBS
T ss_pred ccCCceEEcCcEEEEEecCCCCCceEEeCCChhhccCCceEEEEEEcccCC
Confidence 876542 122333333333444332 11 1223567999999977544
No 135
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.57 E-value=2.2e-13 Score=81.25 Aligned_cols=121 Identities=17% Similarity=0.201 Sum_probs=77.1
Q ss_pred eeccCCccEEEEEEeeec--CCCeeEEEECC--E---Eec---------cCCcEEEEecCCeEEEEEecCCCCCCEEEEE
Q psy12132 3 SITAPDMRAEIICNVYAN--PPAKVEWFRDG--T---AIT---------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMC 66 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~--p~~~~~w~~~~--~---~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 66 (126)
+.+.+|+++.|.|.+.+. +.+.+.|+++. . .+. ...++.....+....|.|.+++..|.|.|.|
T Consensus 12 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C 91 (256)
T 3ux9_B 12 VSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEADYYC 91 (256)
T ss_dssp EEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred EEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCEEEEE
Confidence 567899999999999876 77899999842 1 111 1246666555556789999999999999999
Q ss_pred EEecCCce---eEEEEEEEecCCC--------------------Ceecc--CcceeCCCeeEEEEEEccCCcceeEEEEE
Q psy12132 67 QASNNLGS---SQQFIQLSGIPNI--------------------PVFQK--SSRRLGPDGYRLVWQVDTYSAIIQYLLKF 121 (126)
Q Consensus 67 ~~~~~~~~---~~~~~~l~~~~~~--------------------~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 121 (126)
.+.+..+. ......|.+...+ +.+.. ......++.+.|.|...+..+......||
T Consensus 92 ~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~ 171 (256)
T 3ux9_B 92 QVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVESGGGLVQPGGSLRLSCAASGFTFSSYAMSWV 171 (256)
T ss_dssp EEEETTTTEEEECCCEEEEEC----------------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEEEE
T ss_pred EEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcCCCeEEcCCCeEEEEEEEeCCcccccEEEEE
Confidence 99875431 1222334433221 11211 12245688999999997654222234455
Q ss_pred EE
Q psy12132 122 RE 123 (126)
Q Consensus 122 r~ 123 (126)
|+
T Consensus 172 r~ 173 (256)
T 3ux9_B 172 RQ 173 (256)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 136
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.57 E-value=2.4e-14 Score=83.33 Aligned_cols=112 Identities=20% Similarity=0.297 Sum_probs=73.3
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCC--cEEEE-ecCC-eEEEEEecCCCCCCEEEEEEEecCCceeE-
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGG--RIDMH-VSSE-KHSLLVRHIKDTDFGNYMCQASNNLGSSQ- 76 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~--~~~~~-~~~~-~~~l~i~~~~~~d~g~y~C~~~~~~~~~~- 76 (126)
++.+.+|+++.|.|.+.+.|.+.+.|++++..+.... ..... ..+. ...+.|.++...|.|.|+|.+.+..|...
T Consensus 18 ~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~~~n~~g~~~~ 97 (217)
T 2vr9_A 18 DLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWCVAKNRVGQAVS 97 (217)
T ss_dssp CEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEEEEEEETTEEEEC
T ss_pred ceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEEEEEecCCCcccc
Confidence 4667899999999999999999999999998876431 11121 1221 11236788899999999999999877552
Q ss_pred EEEEEEecCCCCeec---cCcceeCCCeeEEEEEE-ccCCc
Q psy12132 77 QFIQLSGIPNIPVFQ---KSSRRLGPDGYRLVWQV-DTYSA 113 (126)
Q Consensus 77 ~~~~l~~~~~~~~~~---~~~~~~~~~~~~l~~~~-~~~~~ 113 (126)
....+.+...++.+. .......++.+.|.|.. .+.++
T Consensus 98 ~~~~l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~ 138 (217)
T 2vr9_A 98 RHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPE 138 (217)
T ss_dssp CCEEEEECEECCSCSBCCCCEEECTTSCEEECCBCCCEESC
T ss_pred ccceEEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCCCC
Confidence 233333322122211 12223567889999988 55544
No 137
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.57 E-value=8.8e-14 Score=81.00 Aligned_cols=109 Identities=15% Similarity=0.305 Sum_probs=73.0
Q ss_pred eeccCCccEEEEEEeeec-CCCeeEEEECC---E--Ee-c------------cCCcEEEEecCCeEEEEEecCCCCCCEE
Q psy12132 3 SITAPDMRAEIICNVYAN-PPAKVEWFRDG---T--AI-T------------LGGRIDMHVSSEKHSLLVRHIKDTDFGN 63 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~-p~~~~~w~~~~---~--~~-~------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 63 (126)
+.+.+|+++.|.|.+.+. |.+.+.|++.. . .+ . ...++..........|.|.+++..|.|.
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 89 (218)
T 3s96_B 10 ASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNIQPEDEAI 89 (218)
T ss_dssp EEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred EEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEccCCcccCEE
Confidence 567889999999999988 88999999821 1 01 0 1135555545556789999999999999
Q ss_pred EEEEEecCCc-----eeEEEEEEEecC---CCCeecc-C--cceeCCCeeEEEEEEccC
Q psy12132 64 YMCQASNNLG-----SSQQFIQLSGIP---NIPVFQK-S--SRRLGPDGYRLVWQVDTY 111 (126)
Q Consensus 64 y~C~~~~~~~-----~~~~~~~l~~~~---~~~~~~~-~--~~~~~~~~~~l~~~~~~~ 111 (126)
|.|.+.+..| .......|.+.. .+|.+.. . .....++.+.|+|.+.+.
T Consensus 90 Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C~~~g~ 148 (218)
T 3s96_B 90 YICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSSEELKENKATLVCLISNF 148 (218)
T ss_dssp EEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEE
T ss_pred EEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCCcccccCCcEEEEEEECcc
Confidence 9999988654 222233444432 2333322 1 112345789999999774
No 138
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.56 E-value=4.3e-13 Score=81.09 Aligned_cols=112 Identities=14% Similarity=0.245 Sum_probs=80.1
Q ss_pred ceeccCCccEEEEEEeeecC-CCeeEEEE-CCEEecc-CCcEEEEe-cCCeEEEEEecCCCCCCEEEEEEEecCCc-eeE
Q psy12132 2 HSITAPDMRAEIICNVYANP-PAKVEWFR-DGTAITL-GGRIDMHV-SSEKHSLLVRHIKDTDFGNYMCQASNNLG-SSQ 76 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p-~~~~~w~~-~~~~~~~-~~~~~~~~-~~~~~~l~i~~~~~~d~g~y~C~~~~~~~-~~~ 76 (126)
++.+.+|+++.|.|.+.+.+ .+.+.|++ ++..+.. ..++.... ......|.|.++...|.|.|+|.+.+..| ...
T Consensus 11 ~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~ 90 (291)
T 1qz1_A 11 QGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSE 90 (291)
T ss_dssp SEEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEE
T ss_pred CceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEEEcCCCCeeE
Confidence 45678899999999999876 68999999 7766553 34444432 33456899999999999999999999875 345
Q ss_pred EEEEEEecCCCCeecc--CcceeCCCeeEEEEEEccCCc
Q psy12132 77 QFIQLSGIPNIPVFQK--SSRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 77 ~~~~l~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~ 113 (126)
..+.+.+...+..... ......++.+.|.|...+.++
T Consensus 91 ~~~~l~v~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~ 129 (291)
T 1qz1_A 91 ATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLP 129 (291)
T ss_dssp EEEEEEEECCSEEEECCSSEEEETTSCEEECCEEECSSC
T ss_pred EEEEEEeeccccccCCCCcccccCCCeEEEEEEeccCCC
Confidence 6666666433322221 222456888999999977654
No 139
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.56 E-value=7.5e-14 Score=87.85 Aligned_cols=109 Identities=17% Similarity=0.257 Sum_probs=81.2
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccC-CcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLG-GRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
+.+.+|+.+.|.|.+.+.|.+.+.|++++..+... .++..... ..|.|.++...|.|.|+|.+.|..|.....+.+
T Consensus 231 ~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~---~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 307 (403)
T 3laf_A 231 VIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLLGG---SNLLISNVTDDDSGTYTCVVTYKNENISASAEL 307 (403)
T ss_dssp EEEETTSCEEECCEEEEESCCEEEEEETTEECCCSSSSEEEETT---TEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred eEecCCCcEEEEEEcCCCCCCeEEEEECCeeccCCCceEEECCc---cEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEE
Confidence 44668999999999999999999999999877643 33333333 379999999999999999999998888887777
Q ss_pred EecCCCCeecc--CcceeCCCeeEEEEEEccCCcc
Q psy12132 82 SGIPNIPVFQK--SSRRLGPDGYRLVWQVDTYSAI 114 (126)
Q Consensus 82 ~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~ 114 (126)
.+...|..... ......++.+.|+|...+.++.
T Consensus 308 ~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p 342 (403)
T 3laf_A 308 TVLVPPWFLNHPSNLYAYESMDIEFECAVSGKPVP 342 (403)
T ss_dssp EEEEEEEEEECCCCEECCTTCCEEECCEEEEESCC
T ss_pred EEECCCcEeecCcceEEecCCeEEEEEEEeeccCC
Confidence 76432222211 1223467789999999776553
No 140
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.56 E-value=1.9e-15 Score=81.06 Aligned_cols=84 Identities=24% Similarity=0.461 Sum_probs=67.3
Q ss_pred ceeccCCccEEEEEEeeecCCCe-eEEEECCEEecc--CCcEEEE--ecCC--eEEEEEecCCCCCC-EEEEEEEecCCc
Q psy12132 2 HSITAPDMRAEIICNVYANPPAK-VEWFRDGTAITL--GGRIDMH--VSSE--KHSLLVRHIKDTDF-GNYMCQASNNLG 73 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~-~~w~~~~~~~~~--~~~~~~~--~~~~--~~~l~i~~~~~~d~-g~y~C~~~~~~~ 73 (126)
.+.+.+|+++.|.|.+.+.|.|. +.|++++..+.. ..++.+. .... ...|.|.++...|. |.|+|.+.|..|
T Consensus 22 ~~~~~~G~~v~l~C~~~g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~~G~Y~C~a~N~~G 101 (122)
T 2cry_A 22 TQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTISNIVRADFQTIYNCTAWNSFG 101 (122)
T ss_dssp CCCCCTTSCCCCCEEECCSSCCSEEEEESSSCEECSEEETTEEEEEEEETTEEEEEEECTTCCHHHHHSCEEEEEECSSC
T ss_pred eEEEecCCCEEEEEEEeecCCCcEeEEEECCEEccCCCCCCEEEEEecCCCceEEEEEEcCCChhhCCceEEEEEECCCC
Confidence 34678899999999999999987 999999887764 3455442 1112 45899999999998 999999999999
Q ss_pred eeEEEEEEEecC
Q psy12132 74 SSQQFIQLSGIP 85 (126)
Q Consensus 74 ~~~~~~~l~~~~ 85 (126)
...+.+.|.+..
T Consensus 102 ~~~~~~~l~V~~ 113 (122)
T 2cry_A 102 SDTEIIRLKEQG 113 (122)
T ss_dssp EEEEEECCCCSC
T ss_pred eEEEEEEEEECC
Confidence 988888777653
No 141
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.56 E-value=5.1e-13 Score=79.30 Aligned_cols=122 Identities=12% Similarity=0.164 Sum_probs=78.0
Q ss_pred ceeccCCccEEEEEEeeecC-----CCeeEEEECC--E--E-ec---------cCCcEEEEecCCeEEEEEecCCCCCCE
Q psy12132 2 HSITAPDMRAEIICNVYANP-----PAKVEWFRDG--T--A-IT---------LGGRIDMHVSSEKHSLLVRHIKDTDFG 62 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p-----~~~~~w~~~~--~--~-~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g 62 (126)
.+.+.+|+++.|.|.+.+.+ .+.+.|+++. . . +. ...++..........|.|.++...|.|
T Consensus 10 ~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 89 (247)
T 1svz_A 10 YLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLG 89 (247)
T ss_dssp EEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred eEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCCCHHHCE
Confidence 46788999999999998877 6889999842 1 1 11 134666555555678999999999999
Q ss_pred EEEEEEecCCce-eEEEEEEEecCC------------CC-eecc--CcceeCCCeeEEEEEEccCCcceeEEEEEEE
Q psy12132 63 NYMCQASNNLGS-SQQFIQLSGIPN------------IP-VFQK--SSRRLGPDGYRLVWQVDTYSAIIQYLLKFRE 123 (126)
Q Consensus 63 ~y~C~~~~~~~~-~~~~~~l~~~~~------------~~-~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~r~ 123 (126)
.|.|.+.+..+. ......|.+... ++ .... ......++.+.|.|...+..+......|||+
T Consensus 90 ~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~ 166 (247)
T 1svz_A 90 IYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKATNYAFTDYSMHWVKQ 166 (247)
T ss_dssp EEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred EEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEEEEEcCcccCCcEEEEEEe
Confidence 999999886442 112233443321 11 1221 1224568889999999766422223445554
No 142
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.56 E-value=1.8e-13 Score=79.43 Aligned_cols=112 Identities=15% Similarity=0.257 Sum_probs=74.5
Q ss_pred ceeccCCccEEEEEEeeecC---CCeeEEEECC--EEe------------ccCCcEEEEecCCeEEEEEecCCCCCCEEE
Q psy12132 2 HSITAPDMRAEIICNVYANP---PAKVEWFRDG--TAI------------TLGGRIDMHVSSEKHSLLVRHIKDTDFGNY 64 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p---~~~~~w~~~~--~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y 64 (126)
++.+.+|+++.|.|.+.+.| .+.+.|++++ ..+ ....++.....+....|.|.+++..|.|.|
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 88 (212)
T 1q0x_L 9 ALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAIY 88 (212)
T ss_dssp EEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred eEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCCEEE
Confidence 46788999999999998877 4789999852 221 113466555555567899999999999999
Q ss_pred EEEEecCCcee-EEEEEEEec--C-CCCeecc-Cc--ceeCCCeeEEEEEEccCCc
Q psy12132 65 MCQASNNLGSS-QQFIQLSGI--P-NIPVFQK-SS--RRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 65 ~C~~~~~~~~~-~~~~~l~~~--~-~~~~~~~-~~--~~~~~~~~~l~~~~~~~~~ 113 (126)
.|.+.+..+.. .....+.+. . .+|.+.. .. ....+..+.|+|.+.+..|
T Consensus 89 ~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p 144 (212)
T 1q0x_L 89 FCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPSSEELSTAKATLVCTITDFYP 144 (212)
T ss_dssp EEEEECSSCEEECCCEEEEECCSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBS
T ss_pred EEEEecCchhhcCCCeEEEEecCCCCCCeeEEeCCCHHHccCCcEEEEEEEEEEeC
Confidence 99999876532 122234432 1 2333322 11 1235678999999977543
No 143
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.56 E-value=4.5e-13 Score=81.68 Aligned_cols=113 Identities=18% Similarity=0.198 Sum_probs=81.8
Q ss_pred ceeccCCccEEEEEEee-ecCCCeeEEEECCEEeccCCcEEEEec--CCeEEEEEecCCCCCCEEEEEEEecCCceeEEE
Q psy12132 2 HSITAPDMRAEIICNVY-ANPPAKVEWFRDGTAITLGGRIDMHVS--SEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQF 78 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~-~~p~~~~~w~~~~~~~~~~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~ 78 (126)
+..+.+|+.+.|.|.+. +.|.+.+.|++++..+....++.+... .....|.|.++...|.|.|+|.+.+..+.....
T Consensus 116 ~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 195 (312)
T 2y23_A 116 AVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHST 195 (312)
T ss_dssp EEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTEEEEEESCCCGGGCEEEEEEEESSSCEEEEE
T ss_pred ceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCEEEEEEccCCcccCEeEEEEEEeCCceEEEE
Confidence 35677899999999998 889999999999998887766655543 345679999999999999999998765555555
Q ss_pred EEEEe------------------cCCCCeecc--CcceeCCCeeEEEEEEccCCcc
Q psy12132 79 IQLSG------------------IPNIPVFQK--SSRRLGPDGYRLVWQVDTYSAI 114 (126)
Q Consensus 79 ~~l~~------------------~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~ 114 (126)
+.+.. ...+|.+.. ......++.+.|.|...+.++.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~G~~~~l~C~~~~~p~~ 251 (312)
T 2y23_A 196 VVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVANIKKE 251 (312)
T ss_dssp EEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEEETTTEEEEEEEEESCCSS
T ss_pred EEEcchhhhhhcccccccccchhhccCCceeecceEEEeCCCEEEEEEEEcCCCCC
Confidence 44420 011232211 1234578899999999877554
No 144
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.55 E-value=1.3e-13 Score=82.18 Aligned_cols=112 Identities=14% Similarity=0.242 Sum_probs=73.6
Q ss_pred ceeccCCccEEEEEEeeecC-----CCeeEEEECC--EEe------------ccCCcEEEEecCCeEEEEEecCCCCCCE
Q psy12132 2 HSITAPDMRAEIICNVYANP-----PAKVEWFRDG--TAI------------TLGGRIDMHVSSEKHSLLVRHIKDTDFG 62 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p-----~~~~~w~~~~--~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g 62 (126)
.+.+.+|+++.|.|.+.+.+ .+.+.|++++ ..+ ....++.....+....|.|.++...|.|
T Consensus 47 ~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 126 (254)
T 2c1o_A 47 TLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLG 126 (254)
T ss_dssp EEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCS
T ss_pred eEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEecCCCEEEEEECcCCcccCE
Confidence 35678899999999998887 3889999732 211 1124666655556678999999999999
Q ss_pred EEEEEEecCCceeE---EEEEEEecCCCCeecc-Cc--ceeCCCeeEEEEEEccCCc
Q psy12132 63 NYMCQASNNLGSSQ---QFIQLSGIPNIPVFQK-SS--RRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 63 ~y~C~~~~~~~~~~---~~~~l~~~~~~~~~~~-~~--~~~~~~~~~l~~~~~~~~~ 113 (126)
.|.|.+.+..+... ..+.+.....+|.+.. .. ....+..+.|+|.+.+..|
T Consensus 127 ~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p 183 (254)
T 2c1o_A 127 IYYCVQGSHFPPTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYP 183 (254)
T ss_dssp EEEEEECSSSSCEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBS
T ss_pred EEEEEEEcCcceEecCCEEEEECCCCCCCeeEeecCChhhccCCcEEEEEEEecccC
Confidence 99999998754321 1233322222343332 11 1224568999999977433
No 145
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.55 E-value=2.4e-13 Score=83.13 Aligned_cols=108 Identities=21% Similarity=0.352 Sum_probs=77.5
Q ss_pred eeccCCccEEEEEEe------eecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEe-cCCcee
Q psy12132 3 SITAPDMRAEIICNV------YANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQAS-NNLGSS 75 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~------~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~-~~~~~~ 75 (126)
..+..|+++.|.|.+ .+.|.+.+.|++++..+...........+ .|.|.++...|.|.|+|.+. +..|..
T Consensus 113 ~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~~---~L~i~~v~~~d~G~Y~C~a~~n~~g~~ 189 (315)
T 1itb_B 113 QKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKD---RLIVMNVAEKHRGNYTCHASYTYLGKQ 189 (315)
T ss_dssp EEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSSEEEETT---EEEESSCCGGGCEEEEEEEEEEETTEE
T ss_pred eEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccceEeecCc---eEEEEeceehhCcEEEEEEEcCCCCcE
Confidence 346679999999998 78899999999999887543222222233 79999999999999999999 677765
Q ss_pred ---EEEEEEEec----CCCCeeccCcc----eeCCCeeEEEEEEccCCc
Q psy12132 76 ---QQFIQLSGI----PNIPVFQKSSR----RLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 76 ---~~~~~l~~~----~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~ 113 (126)
...+.+.+. ..+|.+...+. ...++.+.|.|...+.++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~ 238 (315)
T 1itb_B 190 YPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLS 238 (315)
T ss_dssp EEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEEEECTT
T ss_pred EEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEEecCCC
Confidence 334444333 34555544332 346788999999987654
No 146
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.55 E-value=6e-14 Score=94.54 Aligned_cols=122 Identities=14% Similarity=0.123 Sum_probs=84.3
Q ss_pred ceeccCCccEEEEEEeeecCCCeeE-EE--ECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCce-eEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVE-WF--RDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGS-SQQ 77 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~-w~--~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~-~~~ 77 (126)
++.+..|+++.|.|.+.|.|.|.+. |+ +++..+.......+........|.|.++...|.|.|+|.+.|..|. ...
T Consensus 173 ~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~n~~G~~~s~ 252 (731)
T 2v5y_A 173 NVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISN 252 (731)
T ss_dssp CEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEEEEEEEEETTEEEECC
T ss_pred ceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccceEEeccccceEEEEEcccccccCeEEEEEEECCCCCccee
Confidence 4567889999999999999999988 77 5666554321111111112358999999999999999999999887 555
Q ss_pred EEEEEec--CCCCeeccCcceeCCCeeEEEEEEc---cCCcceeEEEEEEEe
Q psy12132 78 FIQLSGI--PNIPVFQKSSRRLGPDGYRLVWQVD---TYSAIIQYLLKFRER 124 (126)
Q Consensus 78 ~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~r~~ 124 (126)
...+.+. +.++.... ........+.|+|... +..++..|.+.|+..
T Consensus 253 ~~~l~V~~~P~~~~~p~-~~~~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~ 303 (731)
T 2v5y_A 253 YAELVVKEPPVPIAPPQ-LASVGATYLWIQLNANSINGDGPIVAREVEYCTA 303 (731)
T ss_dssp CEEEEEECCCCBSSCCE-EEEECSSCEEEECCCSSBSSCSCCCEEEEEEEES
T ss_pred eEEEEEecCCCCCCCcc-eeccCCceEEEEeCCcccCCCCccEEEEEEEEEC
Confidence 4555543 22222211 1234567889999873 447889999999875
No 147
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.55 E-value=1.4e-13 Score=78.35 Aligned_cols=79 Identities=25% Similarity=0.474 Sum_probs=66.7
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLS 82 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~ 82 (126)
..+..|+.+.|.|.+.+.|.+.+.|++++..+....++..... ...|.|.++...|.|.|+|.+.|..|.....+.|.
T Consensus 108 ~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 185 (189)
T 2v5t_A 108 ATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGS--NTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQ 185 (189)
T ss_dssp EETTSCCCEEEECEEEEESCCEEEEEETTEECCCSSSEEEETT--TTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred ccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCCcEEEecC--CCEEEEcCCChhhCeeEEEEEEeCCCceeEEEEEE
Confidence 3567799999999999999999999999998876666654432 34799999999999999999999999888877776
Q ss_pred e
Q psy12132 83 G 83 (126)
Q Consensus 83 ~ 83 (126)
+
T Consensus 186 V 186 (189)
T 2v5t_A 186 V 186 (189)
T ss_dssp E
T ss_pred E
Confidence 5
No 148
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.55 E-value=2.1e-13 Score=88.68 Aligned_cols=113 Identities=13% Similarity=0.154 Sum_probs=81.3
Q ss_pred eeccCCccEEEEEEeeecCCCe-eEEEECCEEe--ccCCcEEEEe---cCCeEEEEEecCCCCCCEEEEEEEecCCceeE
Q psy12132 3 SITAPDMRAEIICNVYANPPAK-VEWFRDGTAI--TLGGRIDMHV---SSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQ 76 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~-~~w~~~~~~~--~~~~~~~~~~---~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 76 (126)
..+.+|+++.|.|.+.+.|.+. +.|++++..+ ....+..+.. ......|.|.++...|.|.|+|.+.|..|...
T Consensus 221 ~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~ 300 (524)
T 2ec8_A 221 YLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSAN 300 (524)
T ss_dssp EEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEE
T ss_pred ceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceE
Confidence 3567899999999999998886 9999988763 2222222211 11245899999999999999999999999888
Q ss_pred EEEEEEecCCCCeecc-----CcceeCCCeeEEEEEEccCCcce
Q psy12132 77 QFIQLSGIPNIPVFQK-----SSRRLGPDGYRLVWQVDTYSAII 115 (126)
Q Consensus 77 ~~~~l~~~~~~~~~~~-----~~~~~~~~~~~l~~~~~~~~~~~ 115 (126)
..+.|.+...|..... ......++.+.|.|...+.++..
T Consensus 301 ~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~ 344 (524)
T 2ec8_A 301 VTTTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPE 344 (524)
T ss_dssp EEEEEEEESSCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCC
T ss_pred EEEEEEEeccCceEeecCCCceEEEcCCCcEEEEEEEeecCCCc
Confidence 8888877643332221 12245688899999997765533
No 149
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.55 E-value=1.7e-13 Score=90.33 Aligned_cols=82 Identities=21% Similarity=0.400 Sum_probs=75.2
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
++.+..|+++.|.|.+.|.|.|.+.|++++..+..+.++.+...+....|.|.++.+.|.|.|+|.+.|..|+..+.+.|
T Consensus 491 ~~~v~~G~~~~~~~~v~g~P~P~v~W~k~~~el~~s~~~~i~~~~~~~~L~I~~~~~~D~G~Yt~~A~N~~G~~~~~v~l 570 (573)
T 3uto_A 491 GTEVGEGQSANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRYNGNDYGLTINRVKGDDKGEYTVRAKNSYGTKEEIVFL 570 (573)
T ss_dssp CEEECTTSCEEEEEEEECSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred CcEEeCCCcEEEEEEEEccCCCeEEEEECCEEcccCCcEEEEEcCCEEEEEEcCCCcccCcEEEEEEEeCCCcEEEEEEE
Confidence 35678899999999999999999999999999988888888877788899999999999999999999999999998888
Q ss_pred Ee
Q psy12132 82 SG 83 (126)
Q Consensus 82 ~~ 83 (126)
.|
T Consensus 571 ~V 572 (573)
T 3uto_A 571 NV 572 (573)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 150
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.55 E-value=1.1e-13 Score=85.12 Aligned_cols=112 Identities=18% Similarity=0.284 Sum_probs=75.3
Q ss_pred ceeccCCccEEEEEEeeec-CCCeeEEEECCEEe----cc-----CCcEEEEec-----CCeEEEEEecCCCCCCEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYAN-PPAKVEWFRDGTAI----TL-----GGRIDMHVS-----SEKHSLLVRHIKDTDFGNYMC 66 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~-p~~~~~w~~~~~~~----~~-----~~~~~~~~~-----~~~~~l~i~~~~~~d~g~y~C 66 (126)
++.+.+|+++.|.|.+.+. |.+.+.|++++... .. ..++..... .....|.|.++...|.|.|+|
T Consensus 12 ~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 91 (327)
T 2wng_A 12 SVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADAGTYYC 91 (327)
T ss_dssp EEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGGGCEEEEE
T ss_pred ceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCccccCeEEEE
Confidence 4678899999999999887 88899999986421 11 113332211 234579999999999999999
Q ss_pred EEecCCcee-------EEEEEEEecCCCCeeccC-cceeCCCeeEEEEEEccCCc
Q psy12132 67 QASNNLGSS-------QQFIQLSGIPNIPVFQKS-SRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 67 ~~~~~~~~~-------~~~~~l~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~ 113 (126)
.+.+..+.. ...+.+...+.+|.+..+ .....++.+.|.|...+.++
T Consensus 92 ~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~~~~~~~~g~~~~l~C~~~g~p~ 146 (327)
T 2wng_A 92 VKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSP 146 (327)
T ss_dssp EEEESSTTCEEEEECCCEEEEEEBCCCCCEEECCSSCBCTTCEEEEEEEEEEEBS
T ss_pred EeecCCCcceeEeecCcEEEEEEecCCCceeeccccccCCCCEEEEEEEEeCccC
Confidence 999875431 123344434444444321 22456888999999977654
No 151
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.55 E-value=1.8e-13 Score=71.83 Aligned_cols=81 Identities=21% Similarity=0.338 Sum_probs=58.6
Q ss_pred ceeccCCccEEEEEEeeecC--CCeeEEEECCEEeccCCcEEEEec-C-------CeEEEEEecCCCCCCEEEEEEEecC
Q psy12132 2 HSITAPDMRAEIICNVYANP--PAKVEWFRDGTAITLGGRIDMHVS-S-------EKHSLLVRHIKDTDFGNYMCQASNN 71 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p--~~~~~w~~~~~~~~~~~~~~~~~~-~-------~~~~l~i~~~~~~d~g~y~C~~~~~ 71 (126)
++.+..|+++.|.|.+.+.+ .+.+.|++++..+........... . ....|.|.++...|.|.|+|.+.|.
T Consensus 19 ~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 98 (112)
T 3so5_A 19 TQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTSEGXYQCVISNH 98 (112)
T ss_dssp CEEECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CcEEECCCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeeeeccCCCccccceEEEEeccccccCCeEEEEEEeC
Confidence 35678899999999998654 579999999987754321111110 0 1358999999999999999999998
Q ss_pred Ccee-EEEEEEE
Q psy12132 72 LGSS-QQFIQLS 82 (126)
Q Consensus 72 ~~~~-~~~~~l~ 82 (126)
.|.. ...+.|.
T Consensus 99 ~g~~~s~~~~l~ 110 (112)
T 3so5_A 99 FGSSYSVXAXLT 110 (112)
T ss_dssp TEEEECCCEEEE
T ss_pred CCcEEEeEEEEE
Confidence 8863 3555544
No 152
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.55 E-value=3.1e-14 Score=82.60 Aligned_cols=77 Identities=13% Similarity=0.117 Sum_probs=57.8
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEec----cCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAIT----LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQF 78 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~----~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~ 78 (126)
+.+.+|+++.|.|.+.|.|.|.+.|++++..+. ...++....++....+.+.++...|.|.|+|.+.|..|+....
T Consensus 116 ~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~r~~~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~v 195 (203)
T 4fa8_A 116 SQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHGV 195 (203)
T ss_dssp CCSSCSCCEEEEEEEEEESCCEEEECCC------------CCEECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEEE
T ss_pred EEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCcccccceEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEEE
Confidence 456789999999999999999999988654332 2345555556655567778999999999999999999988764
Q ss_pred E
Q psy12132 79 I 79 (126)
Q Consensus 79 ~ 79 (126)
+
T Consensus 196 ~ 196 (203)
T 4fa8_A 196 Y 196 (203)
T ss_dssp E
T ss_pred E
Confidence 3
No 153
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.55 E-value=7.7e-14 Score=87.69 Aligned_cols=79 Identities=23% Similarity=0.370 Sum_probs=68.5
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
++.+..|+++.|.|.+.|.|.|.+.|++++..+....++.+. .+ .|.|.++...|.|.|+|.+.|..|...+...|
T Consensus 304 ~~~v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~-~~---~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~a~L 379 (384)
T 3kld_A 304 DIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQIE-QG---TLNITIVNLSDAGMYQCVAENKHGVIFSSAEL 379 (384)
T ss_dssp CEEECTTCCEEEECEEEEESCCEEEEEETTEECCCBTTEEEE-TT---EEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred ceEecCCCCEEEEeECCccCCCeEEEEECCEECCCCccEEEe-CC---EEEEeecChhhCEEEEEEEEeCCceEEeceEE
Confidence 356778999999999999999999999999988766666543 33 79999999999999999999999999888888
Q ss_pred Eec
Q psy12132 82 SGI 84 (126)
Q Consensus 82 ~~~ 84 (126)
.|.
T Consensus 380 ~V~ 382 (384)
T 3kld_A 380 SVI 382 (384)
T ss_dssp EEC
T ss_pred EEe
Confidence 764
No 154
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.55 E-value=1.2e-13 Score=78.12 Aligned_cols=100 Identities=16% Similarity=0.176 Sum_probs=70.3
Q ss_pred eeccCCccEEEEEEeeecCCC-eeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPA-KVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
+.+.+|+++.|.|.+.+.+.+ .+.|++++..+... ...|.|.++...|.|.|+|.+.+..++....+.+
T Consensus 14 ~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~~----------~~~L~i~~v~~~d~G~Y~C~~~~~~~s~~~~l~V 83 (176)
T 1f2q_A 14 NRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEET----------NSSLNIVNAKFEDSGEYKCQHQQVNESEPVYLEV 83 (176)
T ss_dssp SEEETTCCEEEECCTTCC----CCEEEETTEECSCC----------SSEEEECSCCGGGCEEEEEECTTSSCCCCEEEEE
T ss_pred cceecCCcEEEEEeCCCCCCcceEEEEECCeECCCC----------ceEEEEeccceecCEEEEEEcCCccccccEEEEE
Confidence 467889999999999888775 69999999876532 2379999999999999999999876555544444
Q ss_pred EecCCCCeecc-CcceeCCCeeEEEEEEccCCcc
Q psy12132 82 SGIPNIPVFQK-SSRRLGPDGYRLVWQVDTYSAI 114 (126)
Q Consensus 82 ~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~ 114 (126)
. ..+..... ......++.+.|.|...+..+.
T Consensus 84 ~--~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~ 115 (176)
T 1f2q_A 84 F--SDWLLLQASAEVVMEGQPLFLRCHGWRNWDV 115 (176)
T ss_dssp E--CSSEEEEESCSEEETTSCEEEEEEEGGGCCE
T ss_pred e--CcceeecCCcceeeCCCCEEEEEEecCCCCc
Confidence 4 22222211 2234578899999999655553
No 155
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.54 E-value=1.7e-13 Score=87.53 Aligned_cols=118 Identities=14% Similarity=0.122 Sum_probs=79.2
Q ss_pred eeccCCccEEEEEEeeecCCC---eeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeE---
Q psy12132 3 SITAPDMRAEIICNVYANPPA---KVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQ--- 76 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~---~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~--- 76 (126)
..+.+|+++.|.|.+.+.|++ .+.|++++..+...... .......|.|..+...|.|.|+|.+.|..|...
T Consensus 96 ~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~~~---~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 172 (450)
T 1z7z_I 96 SWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAV---GEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLEL 172 (450)
T ss_dssp SEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECC---TTTEEEEEEEECCSSCSSCEEEEEEEEECGGGTSCE
T ss_pred ceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeeccccc---ccccceEEEEEeeccccCceEEEEEEcccCCCCceE
Confidence 457789999999999998888 89999999877532211 122234899999999999999999998765422
Q ss_pred -----EEEEEEec---CCCCeeccCcceeCCCeeEEEEEEccCCcceeEEEEEEE
Q psy12132 77 -----QFIQLSGI---PNIPVFQKSSRRLGPDGYRLVWQVDTYSAIIQYLLKFRE 123 (126)
Q Consensus 77 -----~~~~l~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~r~ 123 (126)
....+.+. ..+|.+........++.+.|.|...+..|.....+.|.+
T Consensus 173 ~~~~s~~~~l~v~~~~~~~p~~~~~~~v~~G~~v~l~C~~~g~~P~~~~~~~W~~ 227 (450)
T 1z7z_I 173 FENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLAL 227 (450)
T ss_dssp EEEECCCEECEECCCCSSCCEEECCSEEETTSEEEEEEEEESCTTGGGCEEEEEE
T ss_pred EeeccCccceeeeccCCCCCEecCceeEEeCCcEEEEEEeeCCCCCCceEEEEeC
Confidence 22223322 223333333445678899999999887442222444443
No 156
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.54 E-value=1.5e-13 Score=86.20 Aligned_cols=118 Identities=18% Similarity=0.268 Sum_probs=78.8
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEE-CCEEeccCCcE-EEEecCCeEEEEEecCCCCC------CEEEEEEEecCCce
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFR-DGTAITLGGRI-DMHVSSEKHSLLVRHIKDTD------FGNYMCQASNNLGS 74 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~-~~~~~~~~~~~-~~~~~~~~~~l~i~~~~~~d------~g~y~C~~~~~~~~ 74 (126)
+.+.+|+.+.|.|.+.|.|.+.+.|++ ++..+....+. ....++ .|.|.++...| .|.|+|.+.|..|.
T Consensus 14 ~~~~~G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~~~~~~~~~~~~---~L~i~~~~~~d~~~~~d~G~Y~C~a~n~~g~ 90 (388)
T 2v5m_A 14 IDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDG---KLVFPPFRAEDYRQEVHAQVYACLARNQFGS 90 (388)
T ss_dssp EEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTTTBEECSTT---EEEECCCCGGGCCHHHHEEEEEEEEEETTEE
T ss_pred EEEEcCccEEEEEECCCCCCCEEEEEcCCCCccccCCCceEEcCCc---eEEecccChhhccccccCceEEEEEEccCCe
Confidence 446689999999999999999999999 77766543322 222333 79999999887 99999999998875
Q ss_pred e-EEEEEEEecCCCCe--eccCcceeCCCeeEEEEEEccCCcceeEEEEEEE
Q psy12132 75 S-QQFIQLSGIPNIPV--FQKSSRRLGPDGYRLVWQVDTYSAIIQYLLKFRE 123 (126)
Q Consensus 75 ~-~~~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~r~ 123 (126)
. ...+.+.+...+.. .........++.+.|.|...+..+-....+.|.+
T Consensus 91 ~~s~~~~v~v~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~ 142 (388)
T 2v5m_A 91 IISRDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHT 142 (388)
T ss_dssp EECCCEEEEEECCCCCCCBCCCEEEETTSCEEECCBCCTTTTTTEEEEEEEE
T ss_pred EEecceEEEEccccccccCccceeeecCCcEEEEEECcCCCCCCcceEEEEe
Confidence 4 33444444322221 1222334578889999998765432223445544
No 157
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.54 E-value=5e-13 Score=87.85 Aligned_cols=112 Identities=13% Similarity=0.142 Sum_probs=79.2
Q ss_pred ceeccCCccEEEEEEeeecCCC---eeEEEECCEEe------c--------cCCcEEEEe--cCCeEEEEEecCCCCCCE
Q psy12132 2 HSITAPDMRAEIICNVYANPPA---KVEWFRDGTAI------T--------LGGRIDMHV--SSEKHSLLVRHIKDTDFG 62 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~---~~~w~~~~~~~------~--------~~~~~~~~~--~~~~~~l~i~~~~~~d~g 62 (126)
++.+.+|+++.|.|.+.+.+.+ .+.|++++..+ . ...++.+.. ..+...|.|.++...|.|
T Consensus 9 ~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G 88 (585)
T 2ocw_A 9 EVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSG 88 (585)
T ss_pred eeEEecCCcEEEEEeCCCCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCCCcccCE
Confidence 4678899999999999877654 79999986421 1 123444433 233467999999999999
Q ss_pred EEEEEEecCCceeEEEEEEEecCCCCeecc--CcceeCCCeeEEEEEEccCCc
Q psy12132 63 NYMCQASNNLGSSQQFIQLSGIPNIPVFQK--SSRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 63 ~y~C~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~ 113 (126)
.|+|.+.+..+.....+.|.+...|..... ......++.+.|.|...+..+
T Consensus 89 ~Y~C~~~n~~~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~ 141 (585)
T 2ocw_A 89 RYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENA 141 (585)
T ss_pred EEEEEcccCCCCceEEEEEEEecCccccCCCccEEEEcCCCEEEEEEecCCCC
Confidence 999999988777777777776544332221 222457889999999976543
No 158
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.54 E-value=1.6e-13 Score=83.98 Aligned_cols=80 Identities=18% Similarity=0.283 Sum_probs=64.3
Q ss_pred eccCCccEEEEEEeeecCCC-eeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEEE
Q psy12132 4 ITAPDMRAEIICNVYANPPA-KVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLS 82 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~p~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~ 82 (126)
.+..|+.+.|.|.+.|.|.| .+.|++++..+.... ...+. .|.|.++...|.|.|+|.+.|..|.....+.|.
T Consensus 228 ~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~~~---~~~~~---~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~ 301 (313)
T 4fqp_A 228 WYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPPFA---VAQGA---QLLIRPVDKPINTTLICNVTNALGARQAELTVQ 301 (313)
T ss_dssp EETTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTE---EEETT---EEEECCCSSCCEEEEEEEEECSSCEEEEEEEEE
T ss_pred eecCCCeEEEEEEecCCCCCcEEEEEECCEECCCce---EEeCC---EEEECcCChhhCEEEEEEEEeCCCcEEEEEEEE
Confidence 34568899999999999998 699999987764321 22222 799999999999999999999999999999888
Q ss_pred ecCCCCe
Q psy12132 83 GIPNIPV 89 (126)
Q Consensus 83 ~~~~~~~ 89 (126)
|...||-
T Consensus 302 V~~~PP~ 308 (313)
T 4fqp_A 302 VKEGPPH 308 (313)
T ss_dssp EECCC--
T ss_pred EEeCCCC
Confidence 8766553
No 159
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.54 E-value=3.7e-13 Score=80.84 Aligned_cols=123 Identities=14% Similarity=0.179 Sum_probs=78.4
Q ss_pred ceeccCCccEEEEEEeeecC------CCeeEEEEC--CE---Eec---------cCCcEEEEecCCeEEEEEecCCCCCC
Q psy12132 2 HSITAPDMRAEIICNVYANP------PAKVEWFRD--GT---AIT---------LGGRIDMHVSSEKHSLLVRHIKDTDF 61 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p------~~~~~w~~~--~~---~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~ 61 (126)
.+.+.+|+++.|.|.+.+.+ .+.+.|+++ +. .+. ...++..........|.|.+++..|.
T Consensus 14 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~Ds 93 (264)
T 2gjj_A 14 SLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLTIGSVKAEDL 93 (264)
T ss_dssp EEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred eEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEEECCCCHHHC
Confidence 35688999999999998777 578999984 22 111 13566655445567899999999999
Q ss_pred EEEEEEEecCCce-eEEEEEEEecCCC------------------Ce-ecc--CcceeCCCeeEEEEEEccCCcceeEEE
Q psy12132 62 GNYMCQASNNLGS-SQQFIQLSGIPNI------------------PV-FQK--SSRRLGPDGYRLVWQVDTYSAIIQYLL 119 (126)
Q Consensus 62 g~y~C~~~~~~~~-~~~~~~l~~~~~~------------------~~-~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~ 119 (126)
|.|.|.+.+..+. ......|.|...+ .+ +.. ......++.+.|.|...+.++......
T Consensus 94 G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~ 173 (264)
T 2gjj_A 94 AVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEVVKTGASVKISCKASGYSFTGYFIN 173 (264)
T ss_dssp EEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECCCEEECTTCCEEEEEEEESSCGGGSEEE
T ss_pred EEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCEEEcCCCcEEEEEEEeCCccCCeEEE
Confidence 9999999876432 1112234433221 11 111 122456888999999976643222345
Q ss_pred EEEEe
Q psy12132 120 KFRER 124 (126)
Q Consensus 120 ~~r~~ 124 (126)
|||+.
T Consensus 174 W~r~~ 178 (264)
T 2gjj_A 174 WVKKN 178 (264)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 56653
No 160
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.53 E-value=1.2e-13 Score=84.45 Aligned_cols=110 Identities=19% Similarity=0.194 Sum_probs=83.0
Q ss_pred ccCCccEEEEEEeee----------cCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCce
Q psy12132 5 TAPDMRAEIICNVYA----------NPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGS 74 (126)
Q Consensus 5 ~~~g~~~~l~C~~~~----------~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 74 (126)
+..|+.+.|.|.+.+ .|.+.+.|++++..+....++.....+....|.|.++...|.|.|+|.+.|..|.
T Consensus 110 ~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 189 (317)
T 2y25_A 110 ALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTG 189 (317)
T ss_dssp HTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCCSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCE
T ss_pred cccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCCCCeEEeccCCEEEEEECcCCcccCeeEEEEEEeCCce
Confidence 456778888888776 6889999999998887777777666666678999999999999999999999888
Q ss_pred eEEEEEEEecC-------------------CCCeecc----CcceeCCCeeEEEEEEccCCcc
Q psy12132 75 SQQFIQLSGIP-------------------NIPVFQK----SSRRLGPDGYRLVWQVDTYSAI 114 (126)
Q Consensus 75 ~~~~~~l~~~~-------------------~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~ 114 (126)
....+.+.+.. ..|.+.. ......++.+.|.|...+.++.
T Consensus 190 ~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p 252 (317)
T 2y25_A 190 HQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPP 252 (317)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSEEEEETTSBBCEEEEEECSSCC
T ss_pred EEEEEEEeeeeccccchhhcccCCcccCcCCCCcccccCCccEEEEcCCEEEEEEEEecCCCC
Confidence 88877776421 1122221 1223567889999999877553
No 161
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.53 E-value=3.2e-14 Score=89.33 Aligned_cols=109 Identities=15% Similarity=0.273 Sum_probs=76.7
Q ss_pred ceeccCCccEEEEEEeee-cCCCeeEEEECCEEeccCC-cEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeE---
Q psy12132 2 HSITAPDMRAEIICNVYA-NPPAKVEWFRDGTAITLGG-RIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQ--- 76 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~-~p~~~~~w~~~~~~~~~~~-~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~--- 76 (126)
++.+.+|+++.|.|.+.+ .|.+.+.|++++..+.... ++... .....|.|.++...|.|.|+|.+.+..|...
T Consensus 15 ~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~--~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~s~~ 92 (395)
T 1bih_A 15 EVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALR--KDEGSLVFLRPQASDEGHYQCFAETPAGVASSRV 92 (395)
T ss_dssp EEEEETTSCEEECCCEESCCSSCEEEEEESSSBCCTTTTTEEEC--TTSCCEEESSCCGGGCEEEEEEEEETTEEEECCC
T ss_pred ceEEeCCCEEEEEEEEecCCCCceEEEEECCcCcccccceEEEe--cCCceEEEecCCCCCCcEEEEEEEeCCCeEEeEE
Confidence 356788999999999998 7889999999998776543 22222 2334799999999999999999999877653
Q ss_pred EEEEEEecCCCCeeccCcceeCCCeeEEEEEE-ccCC
Q psy12132 77 QFIQLSGIPNIPVFQKSSRRLGPDGYRLVWQV-DTYS 112 (126)
Q Consensus 77 ~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~ 112 (126)
..+.+...+.++..........++.+.|.|.. .+.+
T Consensus 93 ~~l~v~~~~~p~~~~~~~~~~~G~~v~l~C~~~~~~p 129 (395)
T 1bih_A 93 ISFRKTYLIASPAKTHEKTPIEGRPFQLDCVLPNAYP 129 (395)
T ss_dssp EEEEEEEEECCCCEEEEECCBTTEEEEECCCCCEEES
T ss_pred EEEEEEEeecCCcCCcceeeeeCCcEEEEecCCCCCC
Confidence 33333333333333223334578889999986 4444
No 162
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.53 E-value=5.4e-13 Score=75.79 Aligned_cols=82 Identities=21% Similarity=0.401 Sum_probs=67.0
Q ss_pred eeccCCccEEEEEEeeecC-CCeeEEEE---CC-EEecc--CCcEEEEecCCeEEEEEecCC-CCCCEEEEEEEecCCce
Q psy12132 3 SITAPDMRAEIICNVYANP-PAKVEWFR---DG-TAITL--GGRIDMHVSSEKHSLLVRHIK-DTDFGNYMCQASNNLGS 74 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p-~~~~~w~~---~~-~~~~~--~~~~~~~~~~~~~~l~i~~~~-~~d~g~y~C~~~~~~~~ 74 (126)
..+.+|+.+.|.|.+.+.| .+.+.|++ ++ ..+.. ..++.+...+....|.|.++. ..|.|.|+|.+.|..|.
T Consensus 93 ~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~N~~g~ 172 (184)
T 3b5h_A 93 EHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGS 172 (184)
T ss_dssp EEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTTTSSEEEEEEEEETTEE
T ss_pred cEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeeccccccCceEEEEEEeCCCc
Confidence 4577899999999999999 79999999 44 33432 256666666666799999999 89999999999999999
Q ss_pred eEEEEEEEec
Q psy12132 75 SQQFIQLSGI 84 (126)
Q Consensus 75 ~~~~~~l~~~ 84 (126)
....+.|.|.
T Consensus 173 ~~~~~~l~V~ 182 (184)
T 3b5h_A 173 DQAIITLRVR 182 (184)
T ss_dssp EEEEEEEEEC
T ss_pred ceEEEEEEEe
Confidence 8888877764
No 163
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.53 E-value=1.2e-13 Score=83.49 Aligned_cols=81 Identities=23% Similarity=0.450 Sum_probs=67.8
Q ss_pred eccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEEEe
Q psy12132 4 ITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSG 83 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~~ 83 (126)
.+.+|+.+.|.|.+.+.|.|.+.|++++..+....++.... ....|.|.++...|.|.|+|.+.|..|.....+.+.+
T Consensus 205 ~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~--~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v 282 (291)
T 2wim_A 205 TAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKG--SNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQV 282 (291)
T ss_dssp CSSSCCEEEEECBCCCBSCCEEEEEETTEECCCTTTEEECS--TTCEEEEESCCSTTCEEEEEEEEETTEEEEEEEEEEC
T ss_pred eecCCCeEEEEEEeecCCCCeEEEEECCEECcCCccEEEcC--CccEEEEeeCCcccCEEEEEEEEECCCceeeeEEEEE
Confidence 46679999999999999999999999999887766665432 2358999999999999999999999999999998887
Q ss_pred cCC
Q psy12132 84 IPN 86 (126)
Q Consensus 84 ~~~ 86 (126)
...
T Consensus 283 ~~~ 285 (291)
T 2wim_A 283 FVQ 285 (291)
T ss_dssp ---
T ss_pred EEe
Confidence 543
No 164
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.53 E-value=4.2e-13 Score=79.55 Aligned_cols=121 Identities=15% Similarity=0.139 Sum_probs=75.8
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEE----------------CCEEeccC---CcEEEEe-cCCeEEEEEecCCCCCC
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFR----------------DGTAITLG---GRIDMHV-SSEKHSLLVRHIKDTDF 61 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~----------------~~~~~~~~---~~~~~~~-~~~~~~l~i~~~~~~d~ 61 (126)
.+.+.+|+++.|.|.+.+.+.+.+.|++ ++...... .++.+.. ......|.|.+++..|.
T Consensus 10 ~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~ 89 (246)
T 4dzb_B 10 WVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDS 89 (246)
T ss_dssp EEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECSCCGGGC
T ss_pred EEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECCCCHHHC
Confidence 3567899999999999988899999998 22222111 3555443 23456899999999999
Q ss_pred EEEEEEEecCCc----eeEEEEEEEecC-----CCCeec-cCcc---eeCCCeeEEEEEEccCCcceeEEEEEEE
Q psy12132 62 GNYMCQASNNLG----SSQQFIQLSGIP-----NIPVFQ-KSSR---RLGPDGYRLVWQVDTYSAIIQYLLKFRE 123 (126)
Q Consensus 62 g~y~C~~~~~~~----~~~~~~~l~~~~-----~~~~~~-~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~r~ 123 (126)
|.|.|.+.+..+ .......+.+.. .+|.+. ..+. ...+..+.|+|.+.+.+|.. ..+.|.+
T Consensus 90 G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~-~~v~W~k 163 (246)
T 4dzb_B 90 SFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDH-VELSWWV 163 (246)
T ss_dssp EEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSC-EEEEEEE
T ss_pred EEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCCc-eEEEEEE
Confidence 999999986532 111222344332 233322 2111 12367899999997754422 2344443
No 165
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.53 E-value=3.7e-14 Score=89.23 Aligned_cols=107 Identities=19% Similarity=0.250 Sum_probs=73.9
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccC--CcEEEEecCCeEEEEEe----cCCCCCCEEEEEEEecCCceeE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLG--GRIDMHVSSEKHSLLVR----HIKDTDFGNYMCQASNNLGSSQ 76 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~--~~~~~~~~~~~~~l~i~----~~~~~d~g~y~C~~~~~~~~~~ 76 (126)
+.+.+|+++.|.|.+.+.|.+.+.|++++..+... .++.... ....|.+. ++...|.|.|+|.+.|..|...
T Consensus 27 ~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~--~~~~l~i~~~~~~~~~~D~G~Y~C~a~n~~g~~~ 104 (404)
T 3p3y_A 27 HIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR--RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTAL 104 (404)
T ss_dssp CEECSSSCCCCCEEECCSSCCEEEEEETTEECCGGGCSSCBCCS--SSCCCBCCCTTTCCTTSSCEEEEEEEECSSCEEE
T ss_pred EEEcCCCCEEEEEEecCCCCCeEEEEECCEEeeeecCCcceEec--CCceEEEEeccCCCCccCCEEEEEEEEcCCCeEe
Confidence 46778999999999999999999999999876532 2222211 12245553 7788999999999999887763
Q ss_pred -EEEEEEecCCCCeecc---CcceeCCCeeEEEEEEccC
Q psy12132 77 -QFIQLSGIPNIPVFQK---SSRRLGPDGYRLVWQVDTY 111 (126)
Q Consensus 77 -~~~~l~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~ 111 (126)
..+.+.+...+..... ......++.+.|.|.....
T Consensus 105 s~~~~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~ 143 (404)
T 3p3y_A 105 SNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPG 143 (404)
T ss_dssp EEEEEEEECCCCCCCCCCCCCEEEETTSCEEECCCCCCC
T ss_pred eeeEEEEEeccCccccCCCCCeEEccCCcEEEEeCCCCC
Confidence 5566666433332221 2334578889999988333
No 166
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.53 E-value=5.9e-14 Score=74.60 Aligned_cols=76 Identities=22% Similarity=0.398 Sum_probs=55.3
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCC-----cEEEEecCCeEEEEE--ecCCCCCCEEEEEEEecCCce
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGG-----RIDMHVSSEKHSLLV--RHIKDTDFGNYMCQASNNLGS 74 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~-----~~~~~~~~~~~~l~i--~~~~~~d~g~y~C~~~~~~~~ 74 (126)
++.+..|+++.|.|.+.|.|.|.+.|++++..+.... ......++....+.+ .++...|.|.|+|.+.|..|.
T Consensus 18 ~~~v~~G~~v~L~C~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~D~G~Y~C~a~N~~G~ 97 (117)
T 2v9t_A 18 DLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGE 97 (117)
T ss_dssp CEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCSSCSEEECTTSCEEESSCCCBTTBCSSCEEEEEEEEETTEE
T ss_pred CEEEcCCCcEEEEEECCccCCCeEEEEECCEeccccCCCCcceeEEecCCcEEEEEEEeCCCCcCcCEEEEEEEEeCccc
Confidence 3567889999999999999999999999998776432 222223332222222 255789999999999999887
Q ss_pred eEE
Q psy12132 75 SQQ 77 (126)
Q Consensus 75 ~~~ 77 (126)
...
T Consensus 98 ~~s 100 (117)
T 2v9t_A 98 AVS 100 (117)
T ss_dssp EEC
T ss_pred eEe
Confidence 653
No 167
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.53 E-value=6.8e-13 Score=76.65 Aligned_cols=108 Identities=18% Similarity=0.210 Sum_probs=74.5
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEecc-------------------CCcEEEEecCCeEEEEEecCCCCCCEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITL-------------------GGRIDMHVSSEKHSLLVRHIKDTDFGN 63 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~-------------------~~~~~~~~~~~~~~l~i~~~~~~d~g~ 63 (126)
+.+.+|+++.|.|...+.+.+.+.|++++..... ..+..+..+ ..|.|.++...|.|.
T Consensus 9 ~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~---~~L~i~~v~~~D~G~ 85 (208)
T 3r4d_A 9 PQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSN---GSLLFQMITMKDMGV 85 (208)
T ss_dssp SEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTT---SCEEECSCCGGGCEE
T ss_pred ceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecC---CeEEEccccccCCeE
Confidence 5678899999999988888889999987432110 123333222 379999999999999
Q ss_pred EEEEEecCC-ceeEEEEEEEecCC--CCeecc-CcceeCCCeeEEEEEEccCCc
Q psy12132 64 YMCQASNNL-GSSQQFIQLSGIPN--IPVFQK-SSRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 64 y~C~~~~~~-~~~~~~~~l~~~~~--~~~~~~-~~~~~~~~~~~l~~~~~~~~~ 113 (126)
|+|.+.+.. +.....+.|.+... .|.+.. ......++.+.|.|...+.++
T Consensus 86 Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~~g~~v~l~C~~~~~pp 139 (208)
T 3r4d_A 86 YTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTTVKELDSVTLTCLSNDIGA 139 (208)
T ss_dssp EEEEEECSSCEEEEEEEEEEEECCCCCCEEEESCSSCCTTCCEEEEEECSCTTC
T ss_pred EEEEEEcccCceeEEEEEEEeccCCCCCEEecCCceEeeCCCEEEEEECCCCCC
Confidence 999999874 55556666665432 233322 222456788999999977554
No 168
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.53 E-value=3.7e-13 Score=80.19 Aligned_cols=113 Identities=16% Similarity=0.193 Sum_probs=80.3
Q ss_pred eeccCCccEEEEEEe-eecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 3 SITAPDMRAEIICNV-YANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~-~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
..+.+|+.+.|.|.+ .+.|.+.+.|++++..+... .. ...|.|.++...|.|.|+|.+.+..+.....+.+
T Consensus 92 ~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~-----~~---~~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l 163 (262)
T 3rjd_A 92 RVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFF-----HW---NSNLTILKTNISHNGTYHCSGMGKHRYTSAGISV 163 (262)
T ss_dssp SEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEE-----EE---CCCEEESSCCGGGCEEEEEEEESSSEEEEECEEE
T ss_pred eEEecCCeEEEEEEccCCCCCceEEEEECCcccccc-----CC---CCeEEEEECChhhCEEEEEEEeCCCCccccceEE
Confidence 346689999999999 67778899999998876421 11 1369999999999999999999988777776677
Q ss_pred EecC--CCCeeccCc--ceeCCCeeEEEEEEccCC--cceeEEEEEEE
Q psy12132 82 SGIP--NIPVFQKSS--RRLGPDGYRLVWQVDTYS--AIIQYLLKFRE 123 (126)
Q Consensus 82 ~~~~--~~~~~~~~~--~~~~~~~~~l~~~~~~~~--~~~~~~~~~r~ 123 (126)
.+.. .+|.+.... ....++.+.|+|...+.+ +...+.+.|.+
T Consensus 164 ~V~~~~~~p~~~~~~~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~ 211 (262)
T 3rjd_A 164 TVKELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYM 211 (262)
T ss_dssp EEECSSCCCEEEESSCSSEETTCCEEEEEECCCCCC-----EEEEEEE
T ss_pred EeccCCCCCeEeecCceeecCCCeEEEEeEcccCCCCCCccEEEEEEe
Confidence 6653 344443322 245688999999997775 44455555544
No 169
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.53 E-value=2.7e-14 Score=88.01 Aligned_cols=111 Identities=20% Similarity=0.377 Sum_probs=80.8
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEE-EEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRID-MHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
+.+..|+.+.|.|.+.+.|.+.+.|++++..+....+.. .........|.|.++...|.|.|+|.+.|..|.....+.+
T Consensus 133 ~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 212 (334)
T 1ry7_B 133 LAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTL 212 (334)
T ss_dssp EEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEE
T ss_pred EEecCCCcEEEEEEccCCCCCeEEEEECCEECcccccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEE
Confidence 346679999999999999999999999988765443221 1112233489999999999999999999998888777777
Q ss_pred EecCC---CCeecc----CcceeCCCeeEEEEEEccCCc
Q psy12132 82 SGIPN---IPVFQK----SSRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 82 ~~~~~---~~~~~~----~~~~~~~~~~~l~~~~~~~~~ 113 (126)
.+... +|.+.. ......++.+.|.|...+.++
T Consensus 213 ~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~ 251 (334)
T 1ry7_B 213 DVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQ 251 (334)
T ss_dssp EEECCCCSSCBCCTTCSCCEEEESSCCEEECCCCBCSSC
T ss_pred EEecCCCCCCceEecCCCceEEeCCCCEEEEEEEecCCC
Confidence 76432 233221 122356788999999877654
No 170
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.53 E-value=1.6e-13 Score=86.31 Aligned_cols=80 Identities=25% Similarity=0.386 Sum_probs=69.4
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLS 82 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~ 82 (126)
+.+..|+.+.|.|.+.+.|.+.+.|++++..+....++...... .|.|.++...|.|.|+|.+.|..|.....+.|.
T Consensus 322 ~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~---~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~ 398 (403)
T 3laf_A 322 LYAYESMDIEFECAVSGKPVPTVNWMKNGDVVIPSDYFQIVGGS---NLRILGVVKSDEGFYQCVAENEAGNAQSSAQLI 398 (403)
T ss_dssp EECCTTCCEEECCEEEEESCCEEEEEETTEECCCSSSEEEETTT---EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred eEEecCCeEEEEEEEeeccCCEEEEEECCEECCCCCcEEEecCc---cEEEeccccccCEEEEEEEEcCCceEEEEEEEE
Confidence 45678999999999999999999999999988766666555443 799999999999999999999999999998888
Q ss_pred ecC
Q psy12132 83 GIP 85 (126)
Q Consensus 83 ~~~ 85 (126)
+..
T Consensus 399 V~~ 401 (403)
T 3laf_A 399 VPK 401 (403)
T ss_dssp CCC
T ss_pred EeC
Confidence 753
No 171
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=99.53 E-value=2.7e-13 Score=74.69 Aligned_cols=82 Identities=13% Similarity=0.253 Sum_probs=62.4
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEE---------CCEEeccCCcEEEEe-cCCeEEEEEecCCCCCCEEEEEEEecC
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFR---------DGTAITLGGRIDMHV-SSEKHSLLVRHIKDTDFGNYMCQASNN 71 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~---------~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~g~y~C~~~~~ 71 (126)
++.+..|+++.|.|.+.+.+.+.+.|++ ++..+ ...++.... ......|.|.++...|.|.|+|.+.+.
T Consensus 47 ~~~v~~G~~v~L~C~~~~~~~~~i~W~~~~~~~i~~~~~~~~-~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~ 125 (145)
T 1z9m_A 47 DETVVAGGTVVLKCQVKDHEDSSLQWSNPAQQTLYFGEKRAL-RDNRIQLVTSTPHELSISISNVALADEGEYTCSIFTM 125 (145)
T ss_dssp CEEEETTSCEEEEEECSCCTTCCEEEECTTCCEEEETTEECS-CCTTEEEEEECSSEEEEEECSCCGGGCEEEEEEECSS
T ss_pred eEEEEcCCCEEEEEEEcCCCCcEEEEECCCCcEEEECCceec-ccCCEEEecCCCCeEEEEECCCChhhCEEEEEEEEcC
Confidence 4678899999999999988888999994 32222 234554332 223568999999999999999999998
Q ss_pred CceeEEEEEEEecC
Q psy12132 72 LGSSQQFIQLSGIP 85 (126)
Q Consensus 72 ~~~~~~~~~l~~~~ 85 (126)
+.....+.|.|..
T Consensus 126 -~~~~~~~~L~V~~ 138 (145)
T 1z9m_A 126 -PVRTAKSLVTVLG 138 (145)
T ss_dssp -SCEEEEEEEEEEC
T ss_pred -CCceEEEEEEEEe
Confidence 7777777777653
No 172
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.52 E-value=4.7e-13 Score=76.33 Aligned_cols=98 Identities=11% Similarity=0.076 Sum_probs=68.7
Q ss_pred eccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCce--eEEEEEE
Q psy12132 4 ITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGS--SQQFIQL 81 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~--~~~~~~l 81 (126)
.+.+|+++.|.|.+.+ +.+.+.|++++... .. ....|.|.++...|.|.|+|.+.|..|. ....+.+
T Consensus 18 ~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~~-------~~---~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l 86 (184)
T 2gi7_A 18 LVPLEKPVTLRCQGPP-GVDLYRLEKLSSSR-------YQ---DQAVLFIPAMKRSLAGRYRCSYQNGSLWSLPSDQLEL 86 (184)
T ss_dssp EEETTCCEEEEEECST-TCSEEEEEETTTCC-------EE---SSSEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEE
T ss_pred cccCCCcEEEEEeCCC-CCCEEEEEECCccc-------cC---cccEEEECcCChhhCceEEEEEEcCCCccCCCCCEEE
Confidence 5678999999999986 78899999987541 11 1237999999999999999999987653 2334445
Q ss_pred Eec--CCCCeeccC--cceeCCCeeEEEEEEccCC
Q psy12132 82 SGI--PNIPVFQKS--SRRLGPDGYRLVWQVDTYS 112 (126)
Q Consensus 82 ~~~--~~~~~~~~~--~~~~~~~~~~l~~~~~~~~ 112 (126)
.+. ..+|.+... .....++.+.|.|...+.+
T Consensus 87 ~V~~~~~~p~i~~~p~~~v~~G~~v~l~C~~~~~~ 121 (184)
T 2gi7_A 87 VATGVFAKPSLSAQPGPAVSSGGDVTLQCQTRYGF 121 (184)
T ss_dssp EEESSSCCCEEEEECCCSSCCTTCEEEEEECSSCC
T ss_pred EecCcCCCCEEEeCCCceecCCCcEEEEEEcCCCC
Confidence 442 233433321 2234688999999976544
No 173
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.52 E-value=9e-13 Score=74.89 Aligned_cols=100 Identities=13% Similarity=0.194 Sum_probs=67.2
Q ss_pred eeccCCccEEEEEEeeecCCC--eeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPA--KVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQ 80 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~--~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 80 (126)
..+.+|+++.|.|.+.+.+.| .+.|++++..+....... ....|.+. ...|.|.|+|.+.+.. .. ...
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~~-----~~~~l~i~--~~~d~G~Y~C~~~n~~-~~--~~~ 77 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPG-----QKTEFKVD--SDDQWGEYSCVFLPEP-MG--TAN 77 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCCC-----SEEEEEEC--GGGCCEEEEEEEESTT-SC--EEE
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeCCEEeecccccC-----CcEEEEEe--chhhCeEEEEEEECCc-Cc--EEE
Confidence 456789999999999887777 899999998776443211 12356555 5789999999999832 23 334
Q ss_pred EEecCCCCeecc--CcceeCCCeeEEEEEEccCC
Q psy12132 81 LSGIPNIPVFQK--SSRRLGPDGYRLVWQVDTYS 112 (126)
Q Consensus 81 l~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~ 112 (126)
+.+...|..... ......++.+.|.|...+.+
T Consensus 78 l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p 111 (184)
T 3b5h_A 78 IQLHGPPRVKAVKSSEHINEGETAMLVCKSESVP 111 (184)
T ss_dssp EEECCSCCCEESCSEEEECTTSCEEEEEECCCSS
T ss_pred EEEecCCceeecCCCcEEcCCCcEEEEEEECCCC
Confidence 444322222111 12245688899999998776
No 174
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.52 E-value=4.8e-12 Score=75.52 Aligned_cols=121 Identities=15% Similarity=0.202 Sum_probs=75.5
Q ss_pred ceeccCCccEEEEEEeeec--CCCeeEEEECC----E-Ee-------------ccCCcEEEEec--CCeEEEEEecCCCC
Q psy12132 2 HSITAPDMRAEIICNVYAN--PPAKVEWFRDG----T-AI-------------TLGGRIDMHVS--SEKHSLLVRHIKDT 59 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~--p~~~~~w~~~~----~-~~-------------~~~~~~~~~~~--~~~~~l~i~~~~~~ 59 (126)
++.+.+|+++.|.|.+.+. +.+.+.|++.. . .+ ....++.+..+ .....|.|.+++..
T Consensus 17 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~ 96 (257)
T 3gkz_A 17 PSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLKSVSSE 96 (257)
T ss_dssp CSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred CeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEECCCChh
Confidence 3567889999999999884 46789999832 1 11 01235555432 23568999999999
Q ss_pred CCEEEEEEEecCC----ceeEEEEEEEecCC-------------CCeeccCc---ceeCCCeeEEEEEEccCCcceeEEE
Q psy12132 60 DFGNYMCQASNNL----GSSQQFIQLSGIPN-------------IPVFQKSS---RRLGPDGYRLVWQVDTYSAIIQYLL 119 (126)
Q Consensus 60 d~g~y~C~~~~~~----~~~~~~~~l~~~~~-------------~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~ 119 (126)
|.|.|.|.+.+.. ........|.+... ++.+...+ ....++.+.|.|...+..+.. ...
T Consensus 97 DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~-~v~ 175 (257)
T 3gkz_A 97 DTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSASSSVSSS-HLY 175 (257)
T ss_dssp GCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEEESSCCCGG-GEE
T ss_pred hCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEEEccCccce-EEE
Confidence 9999999999862 11222334444322 23333222 245688999999997754431 234
Q ss_pred EEEE
Q psy12132 120 KFRE 123 (126)
Q Consensus 120 ~~r~ 123 (126)
|||+
T Consensus 176 W~k~ 179 (257)
T 3gkz_A 176 WYQQ 179 (257)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5554
No 175
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.52 E-value=6e-14 Score=81.01 Aligned_cols=108 Identities=17% Similarity=0.249 Sum_probs=73.7
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEe------------ccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEe
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAI------------TLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQAS 69 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 69 (126)
++.+.+|+++.|.|.+.+.|.+.+.|++++..+ ....++.... ..|.|.++...|.|.|+|.+.
T Consensus 13 ~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~----~~L~i~~~~~~d~G~Y~C~~~ 88 (209)
T 1nbq_A 13 EVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLP----TGITFKSVTREDTGTYTCMVS 88 (209)
T ss_dssp BCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEET----TEEECSCCCTTSCSEEEEEEE
T ss_pred ceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeec----cEEEEeeCCHHHCcEEEEEEe
Confidence 356778999999999998889999999865432 1123333332 379999999999999999999
Q ss_pred cCCc--eeEEEEEEEec--CCCCeeccCcceeCCCeeEEEEEE-ccCCc
Q psy12132 70 NNLG--SSQQFIQLSGI--PNIPVFQKSSRRLGPDGYRLVWQV-DTYSA 113 (126)
Q Consensus 70 ~~~~--~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~ 113 (126)
+..| .....+.+.+. +..+..........++.+.|.|.+ .+.++
T Consensus 89 ~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~ 137 (209)
T 1nbq_A 89 EEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSPP 137 (209)
T ss_dssp ETTSSCEECCEEECCEEBCCCCCCCCCBSEEETTSCEEECCCCCSCBSC
T ss_pred cCCCCccceEEEEEEEecCCcCCCcccccceecCCEEEEEEeCCCCCCC
Confidence 8754 33344444443 222222223334578889999986 55544
No 176
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.52 E-value=3.3e-13 Score=78.42 Aligned_cols=74 Identities=26% Similarity=0.534 Sum_probs=60.2
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccC---CcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLG---GRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQ 76 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~---~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 76 (126)
..+..|+++.|.|.+.+.|.+.+.|++++..+... .++..........|.|.++...|.|.|+|.+.|..|...
T Consensus 118 ~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~ 194 (212)
T 2yd6_A 118 KVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQGKYECVATNSAGTRY 194 (212)
T ss_dssp EEEETTSCEEEEEEEECSSCCEEEEEETTEEC------CCEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred eeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceEEEEecCCeEEEEEcCCCcccCEEEEEEEECCCCccc
Confidence 34667999999999999999999999999887643 455555444567899999999999999999999988764
No 177
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.52 E-value=3.4e-13 Score=80.32 Aligned_cols=112 Identities=15% Similarity=0.240 Sum_probs=73.8
Q ss_pred ceeccCCccEEEEEEeeecC-----CCeeEEEECC--E---Eec---------cCCcEEEEecCCeEEEEEecCCCCCCE
Q psy12132 2 HSITAPDMRAEIICNVYANP-----PAKVEWFRDG--T---AIT---------LGGRIDMHVSSEKHSLLVRHIKDTDFG 62 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p-----~~~~~w~~~~--~---~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g 62 (126)
.+.+.+|+++.|.|.+.+.+ .+.+.|++++ . .+. ...++.....+....|.|.+++..|.|
T Consensus 43 ~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 122 (252)
T 3bkj_L 43 SLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRISRVEAEDLG 122 (252)
T ss_dssp EEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred eEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEECCCCcccCE
Confidence 35688999999999998877 5789999853 1 111 124666555556678999999999999
Q ss_pred EEEEEEecCCcee-EEEEEEEec--CCCCeecc-Cc--ceeCCCeeEEEEEEccCCc
Q psy12132 63 NYMCQASNNLGSS-QQFIQLSGI--PNIPVFQK-SS--RRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 63 ~y~C~~~~~~~~~-~~~~~l~~~--~~~~~~~~-~~--~~~~~~~~~l~~~~~~~~~ 113 (126)
.|.|.+.+..+.. .....+.+. ..+|.+.. .. ....++.+.|+|.+.+..|
T Consensus 123 ~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p 179 (252)
T 3bkj_L 123 VYYCFQASLVPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYP 179 (252)
T ss_dssp EEEEEECSBSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBS
T ss_pred EEEEEEEcCCccEECCCEEEEEeCCCcCcEEEEeCCChhhcCCCcEEEEEEEeeEeC
Confidence 9999998865422 112234432 22343322 11 1224668999999977543
No 178
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.52 E-value=1.1e-12 Score=74.73 Aligned_cols=80 Identities=26% Similarity=0.509 Sum_probs=64.9
Q ss_pred eccCCccEEEEEEeeecCCCeeEEEEC--CEEecc-----CCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeE
Q psy12132 4 ITAPDMRAEIICNVYANPPAKVEWFRD--GTAITL-----GGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQ 76 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~p~~~~~w~~~--~~~~~~-----~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 76 (126)
.+..|+.+.|.|.+.+.|.+.+.|+++ +..+.. ..++..........|.|.++...|.|.|+|.+.|..|...
T Consensus 105 ~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 184 (192)
T 2va4_A 105 TTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQ 184 (192)
T ss_dssp EECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEE
T ss_pred eEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEeeccCceEEEEecCCcccCEEEEEEEEecCCceE
Confidence 456799999999999999999999998 555543 2345554444556899999999999999999999999888
Q ss_pred EEEEEEe
Q psy12132 77 QFIQLSG 83 (126)
Q Consensus 77 ~~~~l~~ 83 (126)
..+.|.|
T Consensus 185 ~~~~l~V 191 (192)
T 2va4_A 185 KSMYLDI 191 (192)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 8877765
No 179
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.52 E-value=1.3e-12 Score=77.92 Aligned_cols=119 Identities=13% Similarity=0.180 Sum_probs=77.0
Q ss_pred eeccCCccEEEEEEeeecC--CCeeEEEECC--E---Ee--------------ccCCcEEEEec--CCeEEEEEecCCCC
Q psy12132 3 SITAPDMRAEIICNVYANP--PAKVEWFRDG--T---AI--------------TLGGRIDMHVS--SEKHSLLVRHIKDT 59 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p--~~~~~w~~~~--~---~~--------------~~~~~~~~~~~--~~~~~l~i~~~~~~ 59 (126)
+.+.+|+++.|.|.+.+.+ .+.+.|++.. . .+ ....++.+..+ .....|.|.+++..
T Consensus 12 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~ 91 (256)
T 3umt_A 12 ELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSLTSE 91 (256)
T ss_dssp EEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred eEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCCCcc
Confidence 5678899999999998765 6789998732 1 11 01245555433 23567999999999
Q ss_pred CCEEEEEEEecC----CceeEEEEEEEecCC---------------CCeeccC---cceeCCCeeEEEEEEccCCcceeE
Q psy12132 60 DFGNYMCQASNN----LGSSQQFIQLSGIPN---------------IPVFQKS---SRRLGPDGYRLVWQVDTYSAIIQY 117 (126)
Q Consensus 60 d~g~y~C~~~~~----~~~~~~~~~l~~~~~---------------~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~ 117 (126)
|.|.|.|.+.+. .+.......|.+... ++.+... .....++.+.|.|...+.++. .
T Consensus 92 DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~--~ 169 (256)
T 3umt_A 92 DSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCRASQDIGS--N 169 (256)
T ss_dssp GCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEEESSCCTT--C
T ss_pred cCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEEEecCCCc--E
Confidence 999999999886 222233344554431 3333322 224568899999999776443 2
Q ss_pred EEEEEE
Q psy12132 118 LLKFRE 123 (126)
Q Consensus 118 ~~~~r~ 123 (126)
..|||+
T Consensus 170 v~W~k~ 175 (256)
T 3umt_A 170 LNWLQQ 175 (256)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 445664
No 180
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=99.52 E-value=2.6e-13 Score=83.30 Aligned_cols=121 Identities=14% Similarity=0.088 Sum_probs=80.3
Q ss_pred ceeccCCccEEEEEEeeec-----CCCeeEEEECCEEeccCCcEEEEecCC-eEEEEEecCCCCCCEEEEEEEecCCcee
Q psy12132 2 HSITAPDMRAEIICNVYAN-----PPAKVEWFRDGTAITLGGRIDMHVSSE-KHSLLVRHIKDTDFGNYMCQASNNLGSS 75 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~-----p~~~~~w~~~~~~~~~~~~~~~~~~~~-~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 75 (126)
+..+..|++++|.|.+.+. |.+.+.|.+++..+.. .+.....++. ...|.|.+++..|.|.|.|.+.+..+..
T Consensus 9 ~~~v~~G~~v~l~C~~~~~~~~~~~~~~i~W~~~g~~l~~-~~~~~~~~~~~~~~L~i~~~~~~d~g~y~c~~~~~~~~~ 87 (313)
T 2d9q_B 9 APIVHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQPG-GRQQRLSDGTQESIITLPHLNHTQAFLSCSLNWGNSLQI 87 (313)
T ss_dssp CSEECTTCCEEEEECCCTTSCSSCSCSCCEEESSSCBCTT-CEECCCSSSCCCEEEEESCCCSSEEEEEEEEESSSSEEE
T ss_pred CcEEcCCCCEEEEEEECCCCCCCCcccceEEEeCCEECCc-cceEEEecCeEEEEEEEeccCCCccceEEeeecCCCcee
Confidence 3567899999999999886 5689999999887643 2222222222 2589999999999999999887654444
Q ss_pred EEEEEEEec--CCCCeeccCccee-CCCeeEEEEEEccC-CcceeEEEEEEEe
Q psy12132 76 QQFIQLSGI--PNIPVFQKSSRRL-GPDGYRLVWQVDTY-SAIIQYLLKFRER 124 (126)
Q Consensus 76 ~~~~~l~~~--~~~~~~~~~~~~~-~~~~~~l~~~~~~~-~~~~~~~~~~r~~ 124 (126)
.+.+.|.+. +.+|.... -... ....+.++|.+... .....|.+.|+..
T Consensus 88 ~~~~~l~v~~~P~~P~~l~-c~~~~~~~~~~~~W~~~~~~~~~~~Y~l~~~~~ 139 (313)
T 2d9q_B 88 LDQVELRAGYPPAIPHNLS-CLMNLTTSSLICQWEPGPETHLPTSFTLKSFKS 139 (313)
T ss_dssp EEEEEEEECCCCCCCEEEE-EEEETTTTEEEEEEECCSCCSSCCEEEEEEEEC
T ss_pred EEEEEEccCCCCCCCccce-eeECCCCccEEEEecCCCCCCCceeEEEEEEec
Confidence 445555543 33343332 1122 24689999988432 2245699999864
No 181
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.52 E-value=1.4e-12 Score=77.68 Aligned_cols=112 Identities=10% Similarity=0.134 Sum_probs=72.9
Q ss_pred ceeccCCccEEEEEEeeecC--CCeeEEEEC--CEE---e--------------ccCCcEEEEecC--CeEEEEEecCCC
Q psy12132 2 HSITAPDMRAEIICNVYANP--PAKVEWFRD--GTA---I--------------TLGGRIDMHVSS--EKHSLLVRHIKD 58 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p--~~~~~w~~~--~~~---~--------------~~~~~~~~~~~~--~~~~l~i~~~~~ 58 (126)
++.+.+|+++.|.|.+.+.+ .+.+.|++. +.. + ....++....+. ....|.|.+++.
T Consensus 10 ~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 89 (253)
T 3uzq_A 10 AELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLSSLTS 89 (253)
T ss_dssp CEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeCCCCc
Confidence 46788999999999998744 678999982 111 1 012455554432 356799999999
Q ss_pred CCCEEEEEEEecCCcee-EEEEEEEecC--------------CCCeeccC---cceeCCCeeEEEEEEccCCc
Q psy12132 59 TDFGNYMCQASNNLGSS-QQFIQLSGIP--------------NIPVFQKS---SRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 59 ~d~g~y~C~~~~~~~~~-~~~~~l~~~~--------------~~~~~~~~---~~~~~~~~~~l~~~~~~~~~ 113 (126)
.|+|.|.|.+.+..+.. .....+.+.. .++.+... .....++.+.|.|...+.++
T Consensus 90 ~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~ 162 (253)
T 3uzq_A 90 GDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRASENVD 162 (253)
T ss_dssp GGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEESSCCE
T ss_pred ccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEecCccc
Confidence 99999999999854432 2233444432 12333222 22457889999999977544
No 182
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.52 E-value=1.5e-12 Score=78.25 Aligned_cols=123 Identities=12% Similarity=0.154 Sum_probs=76.3
Q ss_pred ceeccCCccEEEEEEeeecC-----CCeeEEEECC--E---Eec---------cCCcEEEEecCCeEEEEEecCCCCCCE
Q psy12132 2 HSITAPDMRAEIICNVYANP-----PAKVEWFRDG--T---AIT---------LGGRIDMHVSSEKHSLLVRHIKDTDFG 62 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p-----~~~~~w~~~~--~---~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g 62 (126)
.+.+.+|+++.|.|.+.+.+ .+.+.|+++. . .+. ...++..........|.|.+++..|.|
T Consensus 24 ~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG 103 (268)
T 1x9q_A 24 SLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKINRVEAEDLG 103 (268)
T ss_dssp EECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred eEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEECCCChhHCE
Confidence 35678999999999998776 4789999842 1 111 134666554455678999999999999
Q ss_pred EEEEEEecCCce-eEEEEEEEecCC--------CC---------------eec--cCcceeCCCeeEEEEEEccCCccee
Q psy12132 63 NYMCQASNNLGS-SQQFIQLSGIPN--------IP---------------VFQ--KSSRRLGPDGYRLVWQVDTYSAIIQ 116 (126)
Q Consensus 63 ~y~C~~~~~~~~-~~~~~~l~~~~~--------~~---------------~~~--~~~~~~~~~~~~l~~~~~~~~~~~~ 116 (126)
.|.|.+.+..+. ......|.|... +| .+. .......++.+.|+|...+..+...
T Consensus 104 ~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~ 183 (268)
T 1x9q_A 104 VYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGAMKLSCVTSGFTFGHY 183 (268)
T ss_dssp EEEEEECSSSSCEECCCEEEC------------------------CGGGCEEEEECCEEECTTCCEEEEEEEESSCGGGC
T ss_pred EEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCCCcEEEEEEecCcccccc
Confidence 999999886432 111223333211 11 011 1223456889999999976543222
Q ss_pred EEEEEEEe
Q psy12132 117 YLLKFRER 124 (126)
Q Consensus 117 ~~~~~r~~ 124 (126)
...|||+.
T Consensus 184 ~v~W~k~~ 191 (268)
T 1x9q_A 184 WMNWVRQS 191 (268)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEeC
Confidence 34455543
No 183
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.52 E-value=1.7e-13 Score=81.18 Aligned_cols=112 Identities=13% Similarity=0.183 Sum_probs=74.9
Q ss_pred ceeccCCccEEEEEEeee---cCCCeeEEEECCEEe-----c-------------------------cCCcEEEEecCCe
Q psy12132 2 HSITAPDMRAEIICNVYA---NPPAKVEWFRDGTAI-----T-------------------------LGGRIDMHVSSEK 48 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~---~p~~~~~w~~~~~~~-----~-------------------------~~~~~~~~~~~~~ 48 (126)
++.+.+|+++.|.|.+.+ .+.+.+.|++++... . ...+..+... ..
T Consensus 11 ~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~ 89 (250)
T 2fbo_J 11 EVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVANL-AA 89 (250)
T ss_dssp EEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSCT-TS
T ss_pred ceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEeccC-Cc
Confidence 467889999999999987 788899999976321 0 1122222111 13
Q ss_pred EEEEEecCCCCCCEEEEEEEecCCcee-----EEEEEEEecCC--CCeecc-Cc---ceeCCCeeEEEEEEccCCcc
Q psy12132 49 HSLLVRHIKDTDFGNYMCQASNNLGSS-----QQFIQLSGIPN--IPVFQK-SS---RRLGPDGYRLVWQVDTYSAI 114 (126)
Q Consensus 49 ~~l~i~~~~~~d~g~y~C~~~~~~~~~-----~~~~~l~~~~~--~~~~~~-~~---~~~~~~~~~l~~~~~~~~~~ 114 (126)
..|.|.++...|.|.|+|.+.+..+.. ...+.|.+... ++.... .. ....++.+.|.|...+.++.
T Consensus 90 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p 166 (250)
T 2fbo_J 90 PTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANA 166 (250)
T ss_dssp CCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCTTC
T ss_pred ceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCCCC
Confidence 479999999999999999999876532 44666665432 332222 11 12348889999999775443
No 184
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.52 E-value=2.9e-13 Score=78.80 Aligned_cols=112 Identities=16% Similarity=0.193 Sum_probs=72.6
Q ss_pred ceeccCCccEEEEEEeeecC--CCeeEEEECC--EEe---c---------cCCcEEEEecCCeEEEEEecCCCCCCEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANP--PAKVEWFRDG--TAI---T---------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYM 65 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p--~~~~~w~~~~--~~~---~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~ 65 (126)
++.+.+|+++.|.|.+.+.+ .+.+.|++++ ..+ . ...++.....+....|.|.+++..|.|.|.
T Consensus 9 ~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 88 (216)
T 2xzc_L 9 SVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYY 88 (216)
T ss_dssp EEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEEE
T ss_pred cEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEEEE
Confidence 46788999999999964333 5789999843 111 0 124666555556678999999999999999
Q ss_pred EEEecCCc--eeEEEEEEEec--CCCCeecc-Cc--ceeCCCeeEEEEEEccCCc
Q psy12132 66 CQASNNLG--SSQQFIQLSGI--PNIPVFQK-SS--RRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 66 C~~~~~~~--~~~~~~~l~~~--~~~~~~~~-~~--~~~~~~~~~l~~~~~~~~~ 113 (126)
|.+.+..+ .......+.+. ..+|.+.. .+ ....++.+.|+|.+.+..|
T Consensus 89 C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P 143 (216)
T 2xzc_L 89 CGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYP 143 (216)
T ss_dssp EEEECTTSCEEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBS
T ss_pred EEEEeCCCcceECCCEEEEEcCCCCCCceEEeCCChhhccCCcEEEEEEEEeEcC
Confidence 99998765 11222233332 23343332 11 1124678999999977433
No 185
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.51 E-value=1.9e-13 Score=85.58 Aligned_cols=106 Identities=14% Similarity=0.153 Sum_probs=78.3
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLS 82 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~ 82 (126)
+.+..|+.+.|.|.+.+.|.+.+.|++++..+.. .. ......|.|.++...|.|.|+|.+.|..|.....+.+.
T Consensus 217 ~~~~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~--~~----~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 290 (382)
T 1cs6_A 217 TYALTGQMVTLECFAFGNPVPQIKWRKLDGSQTS--KW----LSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRII 290 (382)
T ss_dssp EEEETTCCEEEECEEEEESCCEEEEEECCSCCSC--CC----SBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred eEEeCCCeEEEEEEEccCCCCEEEEEECCccccc--EE----ecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEE
Confidence 4567899999999999999999999998765432 11 11234799999999999999999999988887777777
Q ss_pred ecCCCCeecc--CcceeCCCeeEEEEEEccCCcc
Q psy12132 83 GIPNIPVFQK--SSRRLGPDGYRLVWQVDTYSAI 114 (126)
Q Consensus 83 ~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~ 114 (126)
+...|..... ......++.+.|.|...+.++.
T Consensus 291 V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p 324 (382)
T 1cs6_A 291 IHAQPDWLDVITDTEADIGSDLRWSCVASGKPRP 324 (382)
T ss_dssp EEEEEEEEECCCCEEEETTCCEEEECEEEEESCC
T ss_pred EecCCCcccCCCccEEcCCCeEEEEEEeeeecCC
Confidence 6533322221 2224568889999999776553
No 186
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.51 E-value=1.4e-13 Score=80.19 Aligned_cols=106 Identities=15% Similarity=0.039 Sum_probs=69.5
Q ss_pred ceeccCC--ccEEEEEEeeecCCCeeEEEEC---CEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeE
Q psy12132 2 HSITAPD--MRAEIICNVYANPPAKVEWFRD---GTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQ 76 (126)
Q Consensus 2 ~~~~~~g--~~~~l~C~~~~~p~~~~~w~~~---~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 76 (126)
.+.+.+| +++.|.|.+.+ |.+.+.|++. +..+....++...... .|.|.++...|.|.|+|.+.+..+...
T Consensus 16 ~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~~~~~~~~~---~l~I~~v~~~D~G~Y~C~a~n~~~~~~ 91 (213)
T 2x1w_L 16 VVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWDSKK---GFTIPSYMISYAGMVFCEAKINDESYQ 91 (213)
T ss_dssp EEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCSSSCEEETTT---EEEEEGGGTTTCSEEEEEEC----CEE
T ss_pred EEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCCCcccccCCc---cEEEccCChhcCceEEEEEEECCeeEE
Confidence 3567889 99999999975 7789999884 5555544444433333 699999999999999999987543322
Q ss_pred E-EEEEEecC-CCCe-eccCc---ceeCCCeeEEEEEEccC
Q psy12132 77 Q-FIQLSGIP-NIPV-FQKSS---RRLGPDGYRLVWQVDTY 111 (126)
Q Consensus 77 ~-~~~l~~~~-~~~~-~~~~~---~~~~~~~~~l~~~~~~~ 111 (126)
. .+.+.+.. .++. ..... ....++.+.|.|...+.
T Consensus 92 s~~~~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~ 132 (213)
T 2x1w_L 92 SIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTE 132 (213)
T ss_dssp CCCEEEEECBCCEEEEEEESCSCEEEETTCCEEEEEEEEEC
T ss_pred EEEEEEEEeCCcccceEEcCCCCeEEcCCCCEEEEEEEECC
Confidence 2 24555432 1222 22211 34578899999999764
No 187
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.51 E-value=2.8e-13 Score=79.33 Aligned_cols=107 Identities=10% Similarity=0.064 Sum_probs=69.4
Q ss_pred eccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeE--EEEEecCCCCCCEEEEEEEecCCcee--EEEE
Q psy12132 4 ITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKH--SLLVRHIKDTDFGNYMCQASNNLGSS--QQFI 79 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~--~l~i~~~~~~d~g~y~C~~~~~~~~~--~~~~ 79 (126)
.+.+|++++|.|.+.+ +.+.+.|+|++..+...... ........ .|.|.++...|.|.|+|.+.+..+.. ...+
T Consensus 19 ~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~~-~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~~ 96 (218)
T 1uct_A 19 VIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIGR-RLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTL 96 (218)
T ss_dssp EEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECSE-ECC----CCCEEEECSCCGGGCEEEEEEEEETTTEEEECCCE
T ss_pred ccCCCCCEEEEEEcCC-CCCEEEEEECCCcccccccc-cCCCCcceeeEEEEcccccccCEEEEEEEEcCCCceeecCCE
Confidence 4678999999999976 67899999987554322111 11111223 79999999999999999999876422 3344
Q ss_pred EEEecC--CCCeeccC--cceeCCCeeEEEEEEccCC
Q psy12132 80 QLSGIP--NIPVFQKS--SRRLGPDGYRLVWQVDTYS 112 (126)
Q Consensus 80 ~l~~~~--~~~~~~~~--~~~~~~~~~~l~~~~~~~~ 112 (126)
.|.+.. .+|.+... .....++.+.|.|...+.+
T Consensus 97 ~l~V~~~~~~P~i~~~p~~~v~~G~~v~L~C~~~~~~ 133 (218)
T 1uct_A 97 ELVVTGLYGKPFLSADRGLVLMPGENISLTCSSAHIP 133 (218)
T ss_dssp EEEEECSSCCCEEEESSCSEECTTCCCEEEEECSSSC
T ss_pred EEEEcCcccCCEEEeCCCCccCCCCCEEEEEeCCCCC
Confidence 555432 34443322 2335788999999654443
No 188
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.51 E-value=2.6e-13 Score=85.04 Aligned_cols=108 Identities=15% Similarity=0.213 Sum_probs=77.6
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEE------eccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTA------ITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQ 76 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~------~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 76 (126)
..+.+|+.+.|.|.+.+.|.+.+.|++++.. +....++.. .. ..|.|.++...|.|.|+|.+.|..|...
T Consensus 222 ~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~-~~---~~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 297 (388)
T 2v5m_A 222 LELMVAHTISLLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQ-VS---GTLIIKDAVVEDSGKYLCVVNNSVGGES 297 (388)
T ss_dssp EEEETTSCEEECCCCEEESCCEEEEEEECTTSSCEEECCCSSSEEE-ET---TEEEESSCCGGGCEEEEEEEECSSCEEE
T ss_pred eEEeeCCcEEEEEECCCCCCCEEEEEecCCCCcccccccccCceec-cc---CEEEECcCCHHHCeEEEEEEecCCCcee
Confidence 3456799999999999999999999996422 222233322 22 2799999999999999999999999887
Q ss_pred EEEEEEecCCCCeecc--CcceeCCCeeEEEEEEccCCcc
Q psy12132 77 QFIQLSGIPNIPVFQK--SSRRLGPDGYRLVWQVDTYSAI 114 (126)
Q Consensus 77 ~~~~l~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~ 114 (126)
..+.|.+...+..... ......++.+.|.|...+.++.
T Consensus 298 ~~~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p 337 (388)
T 2v5m_A 298 VETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIK 337 (388)
T ss_dssp EEEEEEEEEEEEEEEESSEEEECTTSCEEEEEEEEEECCC
T ss_pred EEEEEEEeCCCccccCCCcEEecCCCCEEEEEEeccccCC
Confidence 7777776533322221 1223467889999999776543
No 189
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.51 E-value=1e-12 Score=78.48 Aligned_cols=119 Identities=13% Similarity=0.191 Sum_probs=76.0
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECC--E---Ee----------ccCCcEEEE--ecCCeEEEEEecCCCCCCEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDG--T---AI----------TLGGRIDMH--VSSEKHSLLVRHIKDTDFGNY 64 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~--~---~~----------~~~~~~~~~--~~~~~~~l~i~~~~~~d~g~y 64 (126)
.+.+.+|+++.|.|.+.+.+.+.+.|++.. . .+ ....++... .......|.|.++...|+|.|
T Consensus 12 ~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~DsG~Y 91 (256)
T 3tf7_C 12 RVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVHRSDSAVY 91 (256)
T ss_dssp EEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCCGGGCSEE
T ss_pred eEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCCcccCEEE
Confidence 357789999999999998899999999832 1 11 112344442 233456899999999999999
Q ss_pred EEEEecCCce----eEEEEEEEecC-------------------CCCeeccCcc---eeCCCeeEEEEEEccCCcceeEE
Q psy12132 65 MCQASNNLGS----SQQFIQLSGIP-------------------NIPVFQKSSR---RLGPDGYRLVWQVDTYSAIIQYL 118 (126)
Q Consensus 65 ~C~~~~~~~~----~~~~~~l~~~~-------------------~~~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~ 118 (126)
.|.+.+..+. ......|.+.+ .++.+...+. ...++.+.|.|...+..+ ..
T Consensus 92 ~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~---~v 168 (256)
T 3tf7_C 92 FCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGENVTLSCRQTNSHN---YM 168 (256)
T ss_dssp EEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEETTCCEEECEEECSCCS---EE
T ss_pred EEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCcEEEEEEcCCCce---EE
Confidence 9999886431 11122344432 2333333222 346889999999976533 23
Q ss_pred EEEEE
Q psy12132 119 LKFRE 123 (126)
Q Consensus 119 ~~~r~ 123 (126)
.|||+
T Consensus 169 ~W~k~ 173 (256)
T 3tf7_C 169 YWYRQ 173 (256)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 45554
No 190
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.51 E-value=4.2e-13 Score=81.11 Aligned_cols=80 Identities=20% Similarity=0.432 Sum_probs=66.1
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCC----cEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGG----RIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQF 78 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~----~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~ 78 (126)
..+..|+.+.|.|.+.+.|.|.+.|++++..+.... ++... .....|.|.++...|.|.|+|.+.|..|.....
T Consensus 206 ~~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~ 283 (291)
T 1qz1_A 206 ATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFS--DDSSELTIRNVDKNDEAEYVCIAENKAGEQDAS 283 (291)
T ss_dssp EETTSCCCEEEEEEEEEESCCEEEEEETTEECCCC--CCSSEEEC--TTSCEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred cccccCceEEEEEEEEEeCCCcEEEEECCEECcCCCCCCcceEEc--CCCcEEEEEecChhcCEEEEEEEEeCCCceEEE
Confidence 356789999999999999999999999998876543 33332 233589999999999999999999999998888
Q ss_pred EEEEec
Q psy12132 79 IQLSGI 84 (126)
Q Consensus 79 ~~l~~~ 84 (126)
+.|.|.
T Consensus 284 ~~l~V~ 289 (291)
T 1qz1_A 284 IHLKVF 289 (291)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 888764
No 191
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.51 E-value=3.1e-12 Score=86.98 Aligned_cols=110 Identities=18% Similarity=0.282 Sum_probs=83.8
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEE----ecC-CeEEEEEecCCCCCCEEEEEEEecCCceeEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMH----VSS-EKHSLLVRHIKDTDFGNYMCQASNNLGSSQQ 77 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~----~~~-~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 77 (126)
..+.+|+.+.|.|.+.+.|.+.+.|++++..+....++... ..+ ....|.|.++...|.|.|+|.+.|..|....
T Consensus 439 ~~v~~G~~v~L~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 518 (816)
T 3dmk_A 439 ETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEH 518 (816)
T ss_dssp EEECSSSCEEEEEEEECSSCCEEEEEETTEECCSCTTEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEEEE
T ss_pred eEEcCCCCEEEEEEEecCCCCEEEEEECCEECCCCCCcccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeEEE
Confidence 45678999999999999999999999999888766555432 122 2347999999999999999999999998888
Q ss_pred EEEEEecCCCCeecc--CcceeCCCeeEEEEEEccCCc
Q psy12132 78 FIQLSGIPNIPVFQK--SSRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 78 ~~~l~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~ 113 (126)
...+.+...| .+.. ......++.+.|.|...+.++
T Consensus 519 ~~~l~V~~~p-~~~~~~~~~v~~G~~v~l~C~~~g~p~ 555 (816)
T 3dmk_A 519 SAKLNVYGLP-YIRQMEKKAIVAGETLIVTCPVAGYPI 555 (816)
T ss_dssp EEEEEECSSC-EECCCCCEEEETTCCEEEECCEECSSE
T ss_pred EEEEEEecCC-eeEccCCeEEecCCeEEEEEEecCCCC
Confidence 8888775433 2222 122356888999998877553
No 192
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.51 E-value=1.8e-13 Score=78.83 Aligned_cols=110 Identities=13% Similarity=0.225 Sum_probs=73.7
Q ss_pred ceeccCCccEEEEEEee----ecCCCeeEEEECCEEecc------------CCcEEEEecCCeEEEEEecCCCCCCEEEE
Q psy12132 2 HSITAPDMRAEIICNVY----ANPPAKVEWFRDGTAITL------------GGRIDMHVSSEKHSLLVRHIKDTDFGNYM 65 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~----~~p~~~~~w~~~~~~~~~------------~~~~~~~~~~~~~~l~i~~~~~~d~g~y~ 65 (126)
++.+..|+++.|.|.+. +.|.+.+.|++++..+.. ..+..+. ......|.|.+++..|.|.|+
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~-~~~~~~L~I~~v~~~D~G~Y~ 81 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFD-ITNNLSIVILALRPSDEGTYE 81 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEE-STTTTEEEECSCCGGGCEEEE
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEc-cCCCcEEEEecccchhCeEEE
Confidence 46788999999999985 346678999999876520 1222221 123458999999999999999
Q ss_pred EEEecCCcee-----EEEEEEEecCCC--CeeccCcceeCCCeeEEEEEEc-cCCc
Q psy12132 66 CQASNNLGSS-----QQFIQLSGIPNI--PVFQKSSRRLGPDGYRLVWQVD-TYSA 113 (126)
Q Consensus 66 C~~~~~~~~~-----~~~~~l~~~~~~--~~~~~~~~~~~~~~~~l~~~~~-~~~~ 113 (126)
|.+.+..|.. ...+.|.+...+ |.+.. .....++.+.|.|.+. +.++
T Consensus 82 C~~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~-~~~~~g~~~~l~C~~~~g~P~ 136 (201)
T 1dr9_A 82 CVVLKYEKDAFKREHLAEVTLSVKADFPTPSISD-FEIPTSNIRRIICSTSGGFPE 136 (201)
T ss_dssp EEEEECCTTSCEEEEEEEEEEEEECCCCCCEEEE-EECSSTTEEEEEEEEEEESSC
T ss_pred EEEEcCCCCccccccccEEEEEEcCCCCCCceEe-ccCCCCCeEEEEEecCCccCC
Confidence 9999865433 345666654432 22222 1123467889999994 6554
No 193
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.51 E-value=1e-12 Score=75.87 Aligned_cols=107 Identities=13% Similarity=0.126 Sum_probs=69.1
Q ss_pred eccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcE-EEEecCCeEEEEEecCCCCCCEEEEEEEecCC-----ceeEE
Q psy12132 4 ITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRI-DMHVSSEKHSLLVRHIKDTDFGNYMCQASNNL-----GSSQQ 77 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~-~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~-----~~~~~ 77 (126)
.+.+|++++|.|.+. .+.+.+.|+|++..+...... ..........|.|.++...|.|.|+|.+.+.. .....
T Consensus 18 ~v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~ 96 (201)
T 1nkr_A 18 LVKSEETVILQCWSD-VMFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSVTHSPYQVSAPSD 96 (201)
T ss_dssp EEETTCCEEEEEEES-SCCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEEBTTBTTCCCCCCC
T ss_pred ccCCCCcEEEEEecc-CCCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEecCCCCccccCCCC
Confidence 467899999999997 477899999988654321110 01111123579999999999999999997542 12233
Q ss_pred EEEEEec--CCCCeeccC--cceeCCCeeEEEEEEccC
Q psy12132 78 FIQLSGI--PNIPVFQKS--SRRLGPDGYRLVWQVDTY 111 (126)
Q Consensus 78 ~~~l~~~--~~~~~~~~~--~~~~~~~~~~l~~~~~~~ 111 (126)
.+.|.+. ..+|.+... .....++.+.|.|...+.
T Consensus 97 ~~~l~V~~~~~~p~i~~~p~~~v~~G~~v~L~C~~~~~ 134 (201)
T 1nkr_A 97 PLDIVIIGLYEKPSLSAQPGPTVLAGENVTLSCSSRSS 134 (201)
T ss_dssp CEEEEEECSSCCCEEEEESCSEECTTCEEEEEEEESSC
T ss_pred CEEEEeeccCCCCceecCCCCccCCCCeEEEEEeCCCC
Confidence 3444443 234443322 234578899999998754
No 194
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.50 E-value=1.2e-13 Score=78.90 Aligned_cols=78 Identities=27% Similarity=0.544 Sum_probs=64.2
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeE-EEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQ-QFIQL 81 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~-~~~~l 81 (126)
+.+..|+.+.|.|.+.+.|.+.+.|++++..+....++.....+ .|.|.++...|.|.|+|.+.|..|... ..+.|
T Consensus 110 ~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l 186 (192)
T 2iep_A 110 VKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVLESG---SLRIHNVQKEDAGQYRCVAKNSLGTAYSKLVKL 186 (192)
T ss_dssp EEEETTSCEEECCEEEEESCCEEEEEETTEECCCCSSEEECTTS---CEEESSCCGGGCEEEEEEEEETTEEEECCCEEE
T ss_pred eEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCCcEEEecCC---cEEEecCChhhCEEEEEEEEcCCCcEEEEEEEE
Confidence 45678999999999999999999999999888766666555444 799999999999999999999988763 34555
Q ss_pred Ee
Q psy12132 82 SG 83 (126)
Q Consensus 82 ~~ 83 (126)
.+
T Consensus 187 ~V 188 (192)
T 2iep_A 187 EV 188 (192)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 195
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.50 E-value=1.2e-13 Score=86.14 Aligned_cols=100 Identities=10% Similarity=0.016 Sum_probs=75.5
Q ss_pred eeccCCccEEEEEEeee-----cCCCeeEEEECCEEecc--------CCcEEEEe----------cCCeEEEEEecCCCC
Q psy12132 3 SITAPDMRAEIICNVYA-----NPPAKVEWFRDGTAITL--------GGRIDMHV----------SSEKHSLLVRHIKDT 59 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~-----~p~~~~~w~~~~~~~~~--------~~~~~~~~----------~~~~~~l~i~~~~~~ 59 (126)
+.+.+|+.+.|.|.+.+ .|.|.+.|++++..+.. ..++.... ......|.|.++...
T Consensus 186 ~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 265 (363)
T 1wio_A 186 VYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQ 265 (363)
T ss_dssp EEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGG
T ss_pred eEEecCCEEEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcC
Confidence 45678999999998877 77889999999876654 34443322 112348999999999
Q ss_pred CCEEEEEEEecC--CceeEEEEEEEecCCCCeeccCcceeCCCeeEEEEEEccCCc
Q psy12132 60 DFGNYMCQASNN--LGSSQQFIQLSGIPNIPVFQKSSRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 60 d~g~y~C~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 113 (126)
|.|.|+|.+.|. .|.....+.|.+. ...++.+.|+|.+.+.++
T Consensus 266 d~G~Y~C~a~n~~~~g~~~~~~~l~V~-----------~v~g~~~~l~C~~~g~p~ 310 (363)
T 1wio_A 266 YAGSGNLTLALEAKTGKLHQEVNLVVM-----------RATQLQKNLTCEVWGPTS 310 (363)
T ss_dssp GCEEEEEEECBTTTTCCEEEEEEEEEE-----------EECCCSSSEEEEEESSCC
T ss_pred cCcEEEEEEEEhhhcCeEEEEEeEEEE-----------EecCCCeeEEEEEccccC
Confidence 999999999999 8888888777765 122667889999877643
No 196
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.50 E-value=8.9e-13 Score=87.57 Aligned_cols=108 Identities=12% Similarity=0.220 Sum_probs=80.5
Q ss_pred eccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeE-EEEEEE
Q psy12132 4 ITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQ-QFIQLS 82 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~-~~~~l~ 82 (126)
.+..|+++.|.|.+. .|.+.+.|++++..+....++.+... ...|.|.++...|.|.|+|.+.|..|... ..+.|.
T Consensus 478 ~v~~g~~v~l~C~~~-~~~~~i~W~~~g~~l~~~~~~~~~~~--~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~ 554 (642)
T 1e07_A 478 PVEDKDAVAFTCEPE-AQNTTYLWWVNGQSLPVSPRLQLSNG--NRTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLD 554 (642)
T ss_pred eecCCCeEEEEEECC-CCCcEEEEEECCEeCCCCCcEEEcCC--CcEEEEeecChhcCceEEEEeEcCCCCccCCCEEEE
Confidence 456899999999998 47889999999998877666655433 34899999999999999999999887653 345666
Q ss_pred ecCCCCeecc---CcceeCCCeeEEEEEEccCCcc
Q psy12132 83 GIPNIPVFQK---SSRRLGPDGYRLVWQVDTYSAI 114 (126)
Q Consensus 83 ~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~ 114 (126)
+...|+.+.. ......++.+.|.|...+.++.
T Consensus 555 V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p 589 (642)
T 1e07_A 555 VLYGPDTPIISPPDSSYLSGANLNLSCHSASNPSP 589 (642)
T ss_pred EEeCCCcceecCCceeEEcCCcEEEEEEeccCCCC
Confidence 5433332222 2223567889999999877653
No 197
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.50 E-value=4.2e-13 Score=77.65 Aligned_cols=112 Identities=17% Similarity=0.213 Sum_probs=73.3
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCC-----cEEEEecCCeE--EEEEecCCCCCCEEEEEEEecCCce
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGG-----RIDMHVSSEKH--SLLVRHIKDTDFGNYMCQASNNLGS 74 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~-----~~~~~~~~~~~--~l~i~~~~~~d~g~y~C~~~~~~~~ 74 (126)
++.+.+|+++.|.|.+.+.|.+.+.|++++..+.... .......+... .+.+.++...|.|.|+|.+.+..|.
T Consensus 18 ~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~ 97 (212)
T 2v9r_A 18 DLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGE 97 (212)
T ss_dssp CEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEEEEEEEEETTEE
T ss_pred ceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeEEEEEEECCCCc
Confidence 4567889999999999999999999999998765332 11222222111 2344567899999999999998765
Q ss_pred e-EEEEEEEecCCCCeecc---CcceeCCCeeEEEEEE-ccCCc
Q psy12132 75 S-QQFIQLSGIPNIPVFQK---SSRRLGPDGYRLVWQV-DTYSA 113 (126)
Q Consensus 75 ~-~~~~~l~~~~~~~~~~~---~~~~~~~~~~~l~~~~-~~~~~ 113 (126)
. ...+.+.+...++.+.. ......++.+.|.|.. .+.++
T Consensus 98 ~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~ 141 (212)
T 2v9r_A 98 AVSHDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPE 141 (212)
T ss_dssp EECCCEEEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEESC
T ss_pred eeecceEEEEEeccccceeCCCceEecCCCcEEEEEecCCCCCC
Confidence 5 33444444322222221 2234568889999987 55544
No 198
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.50 E-value=2.5e-12 Score=76.76 Aligned_cols=121 Identities=9% Similarity=0.156 Sum_probs=76.6
Q ss_pred ceeccCCccEEEEEEeeec--CCCeeEEEECC--E---Ee-c-------------cCCcEEEEec--CCeEEEEEecCCC
Q psy12132 2 HSITAPDMRAEIICNVYAN--PPAKVEWFRDG--T---AI-T-------------LGGRIDMHVS--SEKHSLLVRHIKD 58 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~--p~~~~~w~~~~--~---~~-~-------------~~~~~~~~~~--~~~~~l~i~~~~~ 58 (126)
.+.+.+|+++.|.|.+.+. +.+.+.|++.. . .+ . ...++.+..+ .....|.|.+++.
T Consensus 15 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 94 (256)
T 3juy_B 15 AEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSLRS 94 (256)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCEEEEEECCCCc
Confidence 4678899999999999873 56789999732 1 11 0 1235655532 3456899999999
Q ss_pred CCCEEEEEEEecC------------CceeEEEEEEEecCC--------------CCeeccC---cceeCCCeeEEEEEEc
Q psy12132 59 TDFGNYMCQASNN------------LGSSQQFIQLSGIPN--------------IPVFQKS---SRRLGPDGYRLVWQVD 109 (126)
Q Consensus 59 ~d~g~y~C~~~~~------------~~~~~~~~~l~~~~~--------------~~~~~~~---~~~~~~~~~~l~~~~~ 109 (126)
.|+|.|.|.+.+. .+.......|.+... ++..... .....++.+.|.|...
T Consensus 95 ~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~ 174 (256)
T 3juy_B 95 ADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSPGERATFSCRSS 174 (256)
T ss_dssp GGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEECTTSCEEEEEEES
T ss_pred ccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEeCCCCEEEEEEEC
Confidence 9999999999886 222233334554332 2222221 2235688999999997
Q ss_pred cCCcceeEEEEEEE
Q psy12132 110 TYSAIIQYLLKFRE 123 (126)
Q Consensus 110 ~~~~~~~~~~~~r~ 123 (126)
+.++.. ...|||+
T Consensus 175 ~~~~~~-~v~W~k~ 187 (256)
T 3juy_B 175 HSIRSR-RVAWYQH 187 (256)
T ss_dssp SCCTTC-CEEEEEE
T ss_pred CCcCCe-eEEEEEE
Confidence 754311 2344554
No 199
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=99.50 E-value=1.9e-12 Score=79.06 Aligned_cols=119 Identities=11% Similarity=0.063 Sum_probs=79.2
Q ss_pred ceeccCCccEEEEEEeee-------cCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCce
Q psy12132 2 HSITAPDMRAEIICNVYA-------NPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGS 74 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~-------~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 74 (126)
++.+..|+++.|.|.+.+ .|.+.+.|.+++..+... ++... ++....|.|.++.+.+ |.|+|.+.+....
T Consensus 13 ~~~v~~G~~v~l~C~~~~~~~~~~~~p~p~i~W~~~g~~i~~~-~~~~~-~~~~~~L~i~~~~~~~-g~Y~C~a~~~g~~ 89 (303)
T 1i1r_A 13 SPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKE-QYTII-NRTASSVTFTDIASLN-IQLTCNILTFGQL 89 (303)
T ss_dssp SCEEETTCCEEEEEEECHHHHHHHTCCGGGEEEEETTEECCGG-GCEEE-ETTEEEEEECSCCCSE-EEEEEEEEETTTE
T ss_pred CceEeCCCCEEEEEEECCccccccCCChhheEEEECCEECChh-heeee-CCcEEEEEEcCcCCCc-eEEEEecccCCCc
Confidence 456789999999999985 377899999999887543 33333 2334589999998874 9999999874212
Q ss_pred e--EEEEEEEe--cCCCCeeccCcceeCCCeeEEEEEEccC-CcceeEEEEEEEe
Q psy12132 75 S--QQFIQLSG--IPNIPVFQKSSRRLGPDGYRLVWQVDTY-SAIIQYLLKFRER 124 (126)
Q Consensus 75 ~--~~~~~l~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~r~~ 124 (126)
. .....+.+ .+.+|.... ........+.++|.+... ..+..|.+.|+..
T Consensus 90 ~~~~~~~~l~v~~~P~~P~~l~-~~~~~~~~v~l~W~~~~~~~~~~~Y~v~~~~~ 143 (303)
T 1i1r_A 90 EQNVYGITIISGLPPEKPKNLS-CIVNEGKKMRCEWDGGRETHLETNFTLKSEWA 143 (303)
T ss_dssp EEEEEEEEEEEECCCCCCEEEE-EEEETTSCCEEEEECCSCCSSCCEEEEEEEET
T ss_pred ceEEEEEEEeccCCCCCCeeeE-EEECCCCcEEEEccCCCCCCCCcCEEEEEEec
Confidence 1 22233333 344444322 122344689999998322 2357899999864
No 200
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.50 E-value=1.7e-12 Score=76.51 Aligned_cols=119 Identities=15% Similarity=0.244 Sum_probs=73.8
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEEC--CEE---e------------ccCCcEEEEe-cCCeEEEEEecCCCCCCEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRD--GTA---I------------TLGGRIDMHV-SSEKHSLLVRHIKDTDFGN 63 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~--~~~---~------------~~~~~~~~~~-~~~~~~l~i~~~~~~d~g~ 63 (126)
++.+.+|+++.|.|. .+.|.+.+.|+++ +.. + ....++.+.. ......|.|.+++..|.|.
T Consensus 9 ~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~ 87 (238)
T 2p1y_A 9 NKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATPSQTSV 87 (238)
T ss_dssp EEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCCGGGCEE
T ss_pred ceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCCcccCee
Confidence 467889999999999 7788899999985 211 1 0123555443 2234589999999999999
Q ss_pred EEEEEecCCcee-----EEEEEEEecCCCC-----------eecc---CcceeCCCeeEEEEEEccCCcceeEEEEEEE
Q psy12132 64 YMCQASNNLGSS-----QQFIQLSGIPNIP-----------VFQK---SSRRLGPDGYRLVWQVDTYSAIIQYLLKFRE 123 (126)
Q Consensus 64 y~C~~~~~~~~~-----~~~~~l~~~~~~~-----------~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~r~ 123 (126)
|.|.+.+..+.. .....+.+...++ .+.. ......++.+.|.|...+.+.. ...|||+
T Consensus 88 Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~--~i~W~k~ 164 (238)
T 2p1y_A 88 YFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYENSAFD--YFPWYQQ 164 (238)
T ss_dssp EEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEECCCTTCC--EEEEEEE
T ss_pred EEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEEecCCCC--cEEEEEE
Confidence 999999865421 1222344433221 2221 1224578899999998766442 2345554
No 201
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.50 E-value=1.7e-13 Score=78.24 Aligned_cols=103 Identities=14% Similarity=0.164 Sum_probs=72.1
Q ss_pred eeccCCccEEEEEEee--ecCCCeeEEEE--CCEEe----------ccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEE
Q psy12132 3 SITAPDMRAEIICNVY--ANPPAKVEWFR--DGTAI----------TLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQA 68 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~--~~p~~~~~w~~--~~~~~----------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 68 (126)
+....|+++.|.|... +.+.+.+.|++ ++..+ ....++.+..++ +|.|.++++.|.|.|+|.+
T Consensus 9 v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ng---sL~I~~v~~~DsG~Y~c~~ 85 (182)
T 1hnf_A 9 TWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNG---TLKIKHLKTDDQDIYKVSI 85 (182)
T ss_dssp EEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTS---CEEECSCCGGGCEEEEEEE
T ss_pred EEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCC---CEEECCCChhhCEEEEEEE
Confidence 5677899999999543 24466899999 87665 234566666555 8999999999999999999
Q ss_pred ecCCceeE--EEEEEEecC--CCCeeccCcceeCCCeeEEEEEEccCCc
Q psy12132 69 SNNLGSSQ--QFIQLSGIP--NIPVFQKSSRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 69 ~~~~~~~~--~~~~l~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 113 (126)
.+..|... ..+.|.+.. ..|.+.. ....+.|+|.+.+.++
T Consensus 86 ~n~~g~~~~~~~~~L~V~~~~~~P~i~~-----~~~~v~L~C~~~~~p~ 129 (182)
T 1hnf_A 86 YDTKGKNVLEKIFDLKIQERVSKPKISW-----TCINTTLTCEVMNGTD 129 (182)
T ss_dssp EETTSCEEEEEEEEEEEECCCCCCEEEE-----ETTTTEEEEECSSCSS
T ss_pred EeCCCceeEEEEEEEEEcCcCCCCEEEE-----ccCcEEEEeEccCCCC
Confidence 98776543 455566543 2333322 2236889999876553
No 202
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.50 E-value=9.6e-13 Score=78.02 Aligned_cols=112 Identities=14% Similarity=0.199 Sum_probs=70.9
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEEC--CEE---e-----------ccCCcEEEEe-cCCeEEEEEecCCCCCCEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRD--GTA---I-----------TLGGRIDMHV-SSEKHSLLVRHIKDTDFGNY 64 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~--~~~---~-----------~~~~~~~~~~-~~~~~~l~i~~~~~~d~g~y 64 (126)
.+.+.+|+++.|.|.+.+.+.+.+.|++. +.. + ....++.+.. ......|.|.+++..|.|.|
T Consensus 10 ~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G~Y 89 (245)
T 3nfj_J 10 TLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLLSDSGFY 89 (245)
T ss_dssp EEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred eEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCChhhCEEE
Confidence 46778999999999999888999999982 111 1 0113444433 23456899999999999999
Q ss_pred EEEEecCCc------eeEEEEEEEecC-----CCCeec-cCcc---eeCCCeeEEEEEEccCCc
Q psy12132 65 MCQASNNLG------SSQQFIQLSGIP-----NIPVFQ-KSSR---RLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 65 ~C~~~~~~~------~~~~~~~l~~~~-----~~~~~~-~~~~---~~~~~~~~l~~~~~~~~~ 113 (126)
.|.+.+..| .......+.+.. .+|... ..+. ...++.+.|+|.+.+..|
T Consensus 90 ~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p 153 (245)
T 3nfj_J 90 LCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFP 153 (245)
T ss_dssp EEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBS
T ss_pred EEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcC
Confidence 999988322 112222344322 233322 1111 112678999999977533
No 203
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.49 E-value=2e-12 Score=77.05 Aligned_cols=99 Identities=18% Similarity=0.206 Sum_probs=72.1
Q ss_pred eeccCCccEEEEEEeeecCCC-eeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPA-KVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
+.+.+|+.+.|.|.+.+.|.+ .+.|++++..+... ...|.|.++...|.|.|+|.+.+..++....+.+
T Consensus 11 ~~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~~----------~~~l~i~~~~~~d~G~Y~C~~~~~~~s~~~~l~v 80 (262)
T 3rjd_A 11 VSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTS----------TPSYRITSASVNDSGEYRCQRGLSGRSDPIQLEI 80 (262)
T ss_dssp SEEETTCCEEEEEECSSCCCTTCEEEEETTEECSCC----------SSEEEESSCCGGGCEEEEEEESSSCCCCCEEEEE
T ss_pred EEeeCCCeEEEEEECCCCCCCceEEEEECCEEeecc----------CCeEEEecCCcccCeEEEEEEecCCccccEEEEE
Confidence 467889999999999988887 99999999876532 1269999999999999999999876655444443
Q ss_pred EecCCCCeecc-CcceeCCCeeEEEEEEccCCc
Q psy12132 82 SGIPNIPVFQK-SSRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 82 ~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~ 113 (126)
. ..+..... ......++.+.|.|......+
T Consensus 81 ~--~~~~~~~~~~~~~~~g~~v~l~C~~~~~~p 111 (262)
T 3rjd_A 81 H--RGWLLLQVSSRVFTEGEPLALRCHAWKDKL 111 (262)
T ss_dssp E--CSSEEEEESCSEEETTSCEEEEEEEGGGCC
T ss_pred e--ccceEecCCCeEEecCCeEEEEEEccCCCC
Confidence 3 22222221 222347888999999944433
No 204
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.49 E-value=3.1e-13 Score=78.50 Aligned_cols=78 Identities=19% Similarity=0.438 Sum_probs=62.9
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccC-CcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEE-EE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLG-GRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQF-IQ 80 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~-~~ 80 (126)
..+..|+.+.|.|.+.+.|.+.+.|++++..+... .++.. ..+ .|.|.++...|.|.|+|.+.|..|..... +.
T Consensus 120 ~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~-~~~---~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~ 195 (212)
T 2yd1_A 120 RVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSL-KDG---FLQIENSREEDQGKYECVAENSMGTEHSKATN 195 (212)
T ss_dssp EEEETTCCEEECCEEECSSCCEEEEEETTEECCTTSTTEEE-ETT---EEEECSCCGGGCEEEEEEEEETTEEEECCCEE
T ss_pred eEeecCCeEEEEEEeccCCCCeEEEEECCeEcccCCCeEEc-cCC---eEEEccCChhhCEEEEEEeecCCCceeEEEEE
Confidence 35567999999999999999999999999887653 44433 333 89999999999999999999999887643 56
Q ss_pred EEec
Q psy12132 81 LSGI 84 (126)
Q Consensus 81 l~~~ 84 (126)
|.|.
T Consensus 196 l~V~ 199 (212)
T 2yd1_A 196 LYVK 199 (212)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6554
No 205
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.49 E-value=5.7e-13 Score=82.81 Aligned_cols=81 Identities=17% Similarity=0.205 Sum_probs=65.4
Q ss_pred ccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEec-------CCeEEEEEecCCCCCCEEEEEEEecCCceeEE
Q psy12132 5 TAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVS-------SEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQ 77 (126)
Q Consensus 5 ~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~-------~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 77 (126)
...|+.+.|.|.+.|.|.|.+.|++++..+........... .....|.|.++...|.|.|+|.+.|..|....
T Consensus 258 ~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~ 337 (347)
T 2ifg_A 258 AVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASA 337 (347)
T ss_dssp CEESSSEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEE
T ss_pred CccCceEEEEEEeeecCCCcEEEEeCCEECCCCcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCceee
Confidence 34688999999999999999999999988875444332111 12457999999999999999999999999988
Q ss_pred EEEEEecC
Q psy12132 78 FIQLSGIP 85 (126)
Q Consensus 78 ~~~l~~~~ 85 (126)
.+.+.|..
T Consensus 338 ~~~l~V~~ 345 (347)
T 2ifg_A 338 SIMAAFMD 345 (347)
T ss_dssp EEEECSCC
T ss_pred EEEEEecC
Confidence 88887753
No 206
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.49 E-value=8.6e-13 Score=79.68 Aligned_cols=108 Identities=16% Similarity=0.180 Sum_probs=77.7
Q ss_pred eeccCCccEEEEEEeeecCCCe-eEEEE-CCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEe-cCCceeEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAK-VEWFR-DGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQAS-NNLGSSQQFI 79 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~-~~w~~-~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~-~~~~~~~~~~ 79 (126)
+.+.+|+++.|.|.+.+.+.+. +.|++ ++..+....++.....+ .|.|.++...|.|.|+|.+. +..+.....+
T Consensus 99 ~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~---~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~ 175 (289)
T 3ejj_X 99 VTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFSPWR---GFIIRKAKVLDSNTYVCKTMVNGRESTSTGI 175 (289)
T ss_dssp EEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEEETTT---EEEESSCCGGGCEEEEEEEEETTEEEECCCE
T ss_pred EEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCccEEECCCC---CEEEeecccccCEEEEEEEEeCCCccccccE
Confidence 5677899999999998877665 99986 66666666666665444 79999999999999999998 5445555566
Q ss_pred EEEecC---CCCeeccCcc---eeCCCeeEEEEEEccCCc
Q psy12132 80 QLSGIP---NIPVFQKSSR---RLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 80 ~l~~~~---~~~~~~~~~~---~~~~~~~~l~~~~~~~~~ 113 (126)
.+.+.. .+|.+...+. ...++.+.|.|...+..|
T Consensus 176 ~l~V~~~~~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p 215 (289)
T 3ejj_X 176 WLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEV 215 (289)
T ss_dssp EEEEESSCCCCCEEEEESSSEECCSSSCEEEEEEEEESSS
T ss_pred EEEEEECCCCCCeEEecCCceEEEeCCcEEEEEEeCCCCC
Confidence 666542 3444333222 236888999999976433
No 207
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.49 E-value=2.7e-12 Score=77.74 Aligned_cols=119 Identities=14% Similarity=0.263 Sum_probs=76.1
Q ss_pred ceeccCCccEEEEEEeeecC--CCeeEEEECC--E--E-ec--------------cCCcEEEEec--CCeEEEEEecCCC
Q psy12132 2 HSITAPDMRAEIICNVYANP--PAKVEWFRDG--T--A-IT--------------LGGRIDMHVS--SEKHSLLVRHIKD 58 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p--~~~~~w~~~~--~--~-~~--------------~~~~~~~~~~--~~~~~l~i~~~~~ 58 (126)
++.+.+|+++.|.|.+.+.+ .+.+.|++++ . . +. ...++....+ .....|.|.+++.
T Consensus 35 ~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 114 (282)
T 1qok_A 35 AELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLSSLTS 114 (282)
T ss_dssp CEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEECSCCG
T ss_pred CEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEECcCCh
Confidence 35678899999999998775 5789999853 1 1 10 1245655442 2356899999999
Q ss_pred CCCEEEEEEEecCCc---e--eEEEEEEEecCC--------------CCeeccCc---ceeCCCeeEEEEEEccCCccee
Q psy12132 59 TDFGNYMCQASNNLG---S--SQQFIQLSGIPN--------------IPVFQKSS---RRLGPDGYRLVWQVDTYSAIIQ 116 (126)
Q Consensus 59 ~d~g~y~C~~~~~~~---~--~~~~~~l~~~~~--------------~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~ 116 (126)
.|.|.|.|.+.+..| . ......|.|... ++.+...+ ....++.+.|.|...+.++
T Consensus 115 ~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~--- 191 (282)
T 1qok_A 115 EDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSASSSVS--- 191 (282)
T ss_dssp GGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEEEESSCCS---
T ss_pred hhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEEecCCCc---
Confidence 999999999998764 1 112223444322 22222211 2456889999999976652
Q ss_pred EEEEEEE
Q psy12132 117 YLLKFRE 123 (126)
Q Consensus 117 ~~~~~r~ 123 (126)
...|||+
T Consensus 192 ~v~W~k~ 198 (282)
T 1qok_A 192 YMHWFQQ 198 (282)
T ss_dssp CCEEEEE
T ss_pred eEEEEEE
Confidence 2345553
No 208
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=3.3e-14 Score=73.10 Aligned_cols=73 Identities=25% Similarity=0.504 Sum_probs=56.7
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCcee--EEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSS--QQFI 79 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~--~~~~ 79 (126)
++.+.+|+++.|.|.+.+.|.+.+.|++++..+.... ...|.|.++...|.|.|+|.+.|..+.. ...+
T Consensus 19 ~~~v~~G~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~---------~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~s~~~ 89 (96)
T 2ens_A 19 GGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPLPP---------SPVLILPEIGPQDQGTYSCVATHSSHGPQESRAV 89 (96)
T ss_dssp TSEECTTCEEEEECCCSSCSSCCCCCEESSSBCSSCC---------CSEEEEESCCTTTCEEEECEECCSSCCCEECCCE
T ss_pred CCEEcCCCeEEEEEEEccCCCCEEEEEECCEECcCCC---------CCEEEECCCCcccCEEEEEEEEeCCCCcEEEEEE
Confidence 3467889999999999999999999999887665332 2379999999999999999999964432 3344
Q ss_pred EEEe
Q psy12132 80 QLSG 83 (126)
Q Consensus 80 ~l~~ 83 (126)
.+.+
T Consensus 90 ~v~V 93 (96)
T 2ens_A 90 SISI 93 (96)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4443
No 209
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.48 E-value=1.5e-12 Score=73.14 Aligned_cols=99 Identities=16% Similarity=0.226 Sum_probs=69.4
Q ss_pred eeccCCccEEEEEEeeecC-CCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANP-PAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p-~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
+.+.+|+++.|.|.+.+.| .+.+.|++++..+..... .+.+.++...|.|.|+|.+.+...... +.+
T Consensus 14 ~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~~~----------~~~~~~~~~~d~G~Y~C~~~~~~~s~~--~~l 81 (170)
T 3ry4_A 14 INVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHTQ----------PSYRFKANNNDSGEYTCQTGQTSLSDP--VHL 81 (170)
T ss_dssp SEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTCCS----------SEEEEECCGGGCEEEEEEETTSBCCCC--EEE
T ss_pred eEEECCCcEEEEEEecCCCCcceEEEEECCeEcccCcc----------ceEEEecccccCeEEEEEEeCCCceEe--EEE
Confidence 3577899999999998876 568999999988764321 355678899999999999997654444 444
Q ss_pred EecCCCCeecc-CcceeCCCeeEEEEEEccCCc
Q psy12132 82 SGIPNIPVFQK-SSRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 82 ~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~ 113 (126)
.+...+..... ......++.+.|.|...+..+
T Consensus 82 ~v~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p 114 (170)
T 3ry4_A 82 TVLFEWLVLQTPHLEFQEGETIMLRCHSWKDKP 114 (170)
T ss_dssp EEECCSEEEECSCSEECTTCCEEEEEEEGGGCC
T ss_pred EEECCceEecCCCceeecCCeEEEEEECCCCCC
Confidence 44333222222 222346788999999965544
No 210
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.48 E-value=2.3e-12 Score=73.71 Aligned_cols=107 Identities=11% Similarity=0.157 Sum_probs=70.5
Q ss_pred eccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCcee--EEEEEE
Q psy12132 4 ITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSS--QQFIQL 81 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~--~~~~~l 81 (126)
.+.+|++++|.|.+.+ +.+.+.|+|++..+...... .........|.|.+++..|.|.|+|.+.+..+.. ...+.|
T Consensus 14 ~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~-~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~s~~~~l 91 (188)
T 1oll_A 14 MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPK-PPERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDL 91 (188)
T ss_dssp EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCS-SCTTCCEEEEEESSCCGGGCEEEEEEEEETTEECCCCCCEEE
T ss_pred cCCCCCCEEEEEecCC-CCCEEEEEECCCcccccccc-cCCCcceeEEEeCcCCcccCeEEEEEecCCCCCCCCCCceEE
Confidence 4678999999999874 45789999998765421000 0011234589999999999999999998754322 334445
Q ss_pred Eec--CCCCeeccC--cceeCCCeeEEEEEEccCC
Q psy12132 82 SGI--PNIPVFQKS--SRRLGPDGYRLVWQVDTYS 112 (126)
Q Consensus 82 ~~~--~~~~~~~~~--~~~~~~~~~~l~~~~~~~~ 112 (126)
.+. ..+|.+... .....++.+.|.|...+..
T Consensus 92 ~V~~~~~~p~i~~~p~~~v~~G~~v~L~C~~~~~~ 126 (188)
T 1oll_A 92 VVTEMYDTPTLSVHPGPEVISGEKVTFYCRLDTAT 126 (188)
T ss_dssp EEESCSCCCEEEEESCSEEETTCEEEEEEECSSSC
T ss_pred EecccCCCCeEEECCCCccccCCEEEEEEEcCCCC
Confidence 443 234443322 2245788999999986544
No 211
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.48 E-value=1.2e-12 Score=85.16 Aligned_cols=112 Identities=18% Similarity=0.272 Sum_probs=75.8
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECC--EE---ec---------cCCcEEEEecCCeEEEEEecCCCCCCEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDG--TA---IT---------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQ 67 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~--~~---~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 67 (126)
.+.+.+|+++.|.|.+.+.|.+.+.|++++ .. +. ...++.....+....|.|.+++..|.|.|+|.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 88 (523)
T 2rcj_C 9 SASGTPGQRVTISCTGTSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEAEDESDYYCA 88 (523)
T ss_pred ceEEecCCcEEEEEEEeccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCChhhCEEEEEE
Confidence 467889999999999998889999999864 11 11 12455544444566899999999999999999
Q ss_pred EecCCce---eEEEEEEEec---CCCCeeccC---cceeCCCeeEEEEEEccCCc
Q psy12132 68 ASNNLGS---SQQFIQLSGI---PNIPVFQKS---SRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 68 ~~~~~~~---~~~~~~l~~~---~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~ 113 (126)
+.+..|. ......|.+. ..+|.+... .....++.+.|.|.+.+.++
T Consensus 89 a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p 143 (523)
T 2rcj_C 89 SWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYP 143 (523)
T ss_pred EccCCCccccccCceEEEeccCCCcCCeEEecCCcccccCCCceEEEEEeccccC
Confidence 9987642 1223344442 223332221 12235678999999987654
No 212
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.48 E-value=1.3e-12 Score=84.98 Aligned_cols=108 Identities=13% Similarity=0.107 Sum_probs=73.6
Q ss_pred ccCCccEEEEEEeeec-CCC-eeEEEECCEEeccCCcEEEE-ecC---CeEEEEEecCCCCCCEEEEEEEecCCceeEEE
Q psy12132 5 TAPDMRAEIICNVYAN-PPA-KVEWFRDGTAITLGGRIDMH-VSS---EKHSLLVRHIKDTDFGNYMCQASNNLGSSQQF 78 (126)
Q Consensus 5 ~~~g~~~~l~C~~~~~-p~~-~~~w~~~~~~~~~~~~~~~~-~~~---~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~ 78 (126)
+.+|+.+.|.|.+.+. |.| .+.|++++..+......... .++ ....|.|.++...| |.|+|.+.|..|.....
T Consensus 231 ~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~~~ 309 (523)
T 2rcj_C 231 STSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVD 309 (523)
T ss_pred cccCCceEEEEEEeceeCCCeEEEEecCCcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCcceE
Confidence 4679999999999886 777 89999998764321100111 111 12479999999999 99999999998877666
Q ss_pred EEEEecCCCCeeccCcc----eeCCCeeEEEEEEccCCc
Q psy12132 79 IQLSGIPNIPVFQKSSR----RLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 79 ~~l~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~ 113 (126)
..+.+...|......+. ...++.+.|.|...+.+|
T Consensus 310 ~~l~v~~~P~~~~~~p~~~~~v~~g~~~~l~C~~~g~~p 348 (523)
T 2rcj_C 310 KRVEPLSLPSVFLFPPKPKDTLMISRTPEVTCVVVDVSH 348 (523)
T ss_pred EecCCCcCceEEecCCCchhhcccCCceEEEEEEecccC
Confidence 66654433333332221 245788999999987643
No 213
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.48 E-value=7.4e-14 Score=80.17 Aligned_cols=110 Identities=17% Similarity=0.222 Sum_probs=73.1
Q ss_pred ceeccCCccEEEEEE-eeecCC-CeeEEEECCEEecc--CCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEE
Q psy12132 2 HSITAPDMRAEIICN-VYANPP-AKVEWFRDGTAITL--GGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQ 77 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~-~~~~p~-~~~~w~~~~~~~~~--~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 77 (126)
++.+.+|+++.|.|. +.+.|. +.+.|++++..+.. ..+.... .....|.|.++...|.|.|+|.+.+..+....
T Consensus 17 ~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~ 94 (201)
T 3s97_C 17 EVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVS--QTNGNLYIANVEASDKGNYSCFVSSPSITKSV 94 (201)
T ss_dssp CEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEEC--TTTCCEEESSCCGGGCEEEEEEEEEGGGTEEE
T ss_pred eEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEE--cCCCeEEECcCCcccCeEEEEEEEecCCCcch
Confidence 467889999999999 888888 99999998866542 2222222 22347999999999999999999986544332
Q ss_pred ---EEEEEecC------CCCeecc---CcceeCCCeeEEEEEEccCCc
Q psy12132 78 ---FIQLSGIP------NIPVFQK---SSRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 78 ---~~~l~~~~------~~~~~~~---~~~~~~~~~~~l~~~~~~~~~ 113 (126)
.+.+.+.. .+|.+.. ......++.+.|.|...+.++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~ 142 (201)
T 3s97_C 95 FSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPV 142 (201)
T ss_dssp ECCCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEEEESC
T ss_pred hhcccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEccCCCC
Confidence 22222211 1222211 222356788999999877644
No 214
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.48 E-value=9.2e-14 Score=80.03 Aligned_cols=107 Identities=13% Similarity=0.133 Sum_probs=71.8
Q ss_pred eccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCC-c--eeEEEEE
Q psy12132 4 ITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNL-G--SSQQFIQ 80 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~-~--~~~~~~~ 80 (126)
.+.+|+++.|.|.+.+.|. .+.|+|++..+....... ........|.|.++...|.|.|+|.+.|.. | .....+.
T Consensus 15 ~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~-~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~g~~~~s~~~~ 92 (198)
T 1ugn_A 15 VITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIP-QELVKKGQFPIPSITWEHTGRYRCYYGSDTAGRSESSDPLE 92 (198)
T ss_dssp EEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSC-HHHHTTTEEEESSCCGGGCEEEEEEEEETTTEECCCCCCEE
T ss_pred cccCCCcEEEEEEecCCCc-EEEEEECCcccccccccc-ccCCcccEEEECCCCHHHCeEEEEEEECCCCCcccCCccEE
Confidence 5678999999999987765 799999987653211100 001122479999999999999999999876 4 2234455
Q ss_pred EEecC--CCCeeccC--cceeCCCeeEEEEEEccCC
Q psy12132 81 LSGIP--NIPVFQKS--SRRLGPDGYRLVWQVDTYS 112 (126)
Q Consensus 81 l~~~~--~~~~~~~~--~~~~~~~~~~l~~~~~~~~ 112 (126)
|.+.. .+|.+... .....++.+.|.|...+..
T Consensus 93 l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~~~ 128 (198)
T 1ugn_A 93 LVVTGAYIKPTLSAQPSPVVNSGGNVTLQCDSQVAF 128 (198)
T ss_dssp EEEECSSCCCEEEEESCSEEETTCCEEEEEECSSCC
T ss_pred EEEcccccCCccccCCccccCCCCcEEEEEecCCCC
Confidence 55433 23433322 2345788999999997763
No 215
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.48 E-value=8.1e-13 Score=74.68 Aligned_cols=102 Identities=13% Similarity=0.100 Sum_probs=68.4
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEecc------------CCcEEEEecCCeEEEEEecCCCCCCEEEEEEEe
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITL------------GGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQAS 69 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~------------~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 69 (126)
.+.+..|++++|.|.+. .|.+.+.|++++..+.. ..++.+. ..+.+|.|.+++..|.|.|.|.+.
T Consensus 4 ~v~~~~G~~VtL~c~~~-~~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~--~~~~sL~I~~v~~~DsG~Y~C~~~ 80 (171)
T 1ccz_A 4 QIYGVVYGNVTFHVPSN-VPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLD--TVSGSLTIYNLTSSDEDEYEMESP 80 (171)
T ss_dssp EEEEETTCCEEECCCCS-SCCSCEEEEETTEEEEEEETTEEEECGGGTTSEEEC--TTTCCEEECSCCGGGCEEEEEECT
T ss_pred EEEEEcCCCEEEcCCCC-CCcceEEEEeCCcEEEEEcCCCcccccccCCcEEEe--CCCCeEEECCCChhhCceEEEEEe
Confidence 46788999999999985 47889999998764321 1122221 123489999999999999999999
Q ss_pred cCCceeEEEEEEEecC--CCCeeccCcceeCCCeeEEEEEEccCCc
Q psy12132 70 NNLGSSQQFIQLSGIP--NIPVFQKSSRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 70 ~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 113 (126)
+..+ ...+.|.|.. ..|.+..... ...|+|.+.+.++
T Consensus 81 n~~~--~~~~~L~V~~~~~~p~i~~~~~-----~~~L~C~~~~~p~ 119 (171)
T 1ccz_A 81 NITD--TMKFFLYVLEMVSKPMIYWECS-----NATLTCEVLEGTD 119 (171)
T ss_dssp TCCS--CEEEEEEEECCCCCCEEEEETT-----TTEEEEECSSCSS
T ss_pred CCCC--cEEEEEEEECcCCCCEEEEecC-----CcEEEEEeCCCCC
Confidence 8877 4455555533 3333322111 1379999876543
No 216
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.48 E-value=3.4e-13 Score=78.03 Aligned_cols=80 Identities=19% Similarity=0.400 Sum_probs=63.1
Q ss_pred eeccCCccEEEEEEe-eecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEE-EEE
Q psy12132 3 SITAPDMRAEIICNV-YANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQ-FIQ 80 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~-~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~-~~~ 80 (126)
+.+..|+.+.|.|.+ .+.|.+.+.|++++..+...........+ .|.|.++...|.|.|+|.+.|..|.... .+.
T Consensus 121 ~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~ 197 (212)
T 2v9r_A 121 VMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGG---KLMITYTRKSDAGKYVCVGTNMVGERESEVAE 197 (212)
T ss_dssp EEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTSTTEEEETT---EEEESSCCGGGCEEEEEEEEETTEEEECCCEE
T ss_pred eEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCcceEEccCC---eEEEeeCCHhhCeeEEEEEecccCceecceEE
Confidence 456789999999998 88999999999999887654332223333 7999999999999999999999887654 366
Q ss_pred EEecC
Q psy12132 81 LSGIP 85 (126)
Q Consensus 81 l~~~~ 85 (126)
|.+..
T Consensus 198 l~V~~ 202 (212)
T 2v9r_A 198 LTVLE 202 (212)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 66653
No 217
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.48 E-value=5.7e-13 Score=83.43 Aligned_cols=78 Identities=23% Similarity=0.377 Sum_probs=67.4
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLS 82 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~ 82 (126)
..+..|+.+.|.|.+.+.|.|.+.|++++..+....++... .+ .|.|.++...|.|.|+|.+.|..|...+.+.|.
T Consensus 304 ~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~-~~---~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~ 379 (382)
T 1cs6_A 304 TEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEVS-GG---ELRFSKLVLEDSGMYQCVAENKHGTVYASAELT 379 (382)
T ss_dssp EEEETTCCEEEECEEEEESCCEEEEEETTEECCCCSSEEEE-TT---EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred cEEcCCCeEEEEEEeeeecCCEEEEEECCEECCCCceEEEE-CC---EEEECcCCcccCEEEEEEEEeCCCeEEEEEEEE
Confidence 45678999999999999999999999999988776666543 22 799999999999999999999999998888887
Q ss_pred ec
Q psy12132 83 GI 84 (126)
Q Consensus 83 ~~ 84 (126)
|.
T Consensus 380 V~ 381 (382)
T 1cs6_A 380 VQ 381 (382)
T ss_dssp EE
T ss_pred Ee
Confidence 64
No 218
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.48 E-value=3.6e-13 Score=83.48 Aligned_cols=103 Identities=13% Similarity=0.145 Sum_probs=69.0
Q ss_pred eccCCccEEEEEEe-----eecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCC-cee--
Q psy12132 4 ITAPDMRAEIICNV-----YANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNL-GSS-- 75 (126)
Q Consensus 4 ~~~~g~~~~l~C~~-----~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~-~~~-- 75 (126)
.+..|+.+.|.|.+ .+.|.+.+.|++++..+....++. ..+ ..|.|.++...|.|.|+|.+.|.. |..
T Consensus 131 ~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~~~~~--~~~--~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~ 206 (349)
T 4dep_C 131 LYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFNNVI--PEG--MNLSFLIALISNNGNYTCVVTYPENGRTFH 206 (349)
T ss_dssp EETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSCSSEE--EET--TEEEEESCCGGGCEEEEEEEEEEETTEEEE
T ss_pred eeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCcccee--ecC--CEEEEeeeeecCCcEEEEEEEEeeCCEEEE
Confidence 56789999999985 678899999999998875443332 222 379999999999999999999875 443
Q ss_pred -EEEEEEEecCC-----CCeeccCc-----ceeCCCeeEEEEEEcc
Q psy12132 76 -QQFIQLSGIPN-----IPVFQKSS-----RRLGPDGYRLVWQVDT 110 (126)
Q Consensus 76 -~~~~~l~~~~~-----~~~~~~~~-----~~~~~~~~~l~~~~~~ 110 (126)
...+.+.+... +|.+.... ....++.+.|.|...+
T Consensus 207 ~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~ 252 (349)
T 4dep_C 207 LTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYF 252 (349)
T ss_dssp EEEEEEEEEECCGGGCCSCEEC----------------CCCEEEEE
T ss_pred EEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEEEEEEEEE
Confidence 56666666432 45444322 2345777899999864
No 219
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.48 E-value=3.9e-12 Score=74.18 Aligned_cols=109 Identities=17% Similarity=0.292 Sum_probs=72.0
Q ss_pred ceeccCCccEEEEEEeeecC--CCeeEEEEC--CEEec-----------------cCCcEEEEec--CCeEEEEEecCCC
Q psy12132 2 HSITAPDMRAEIICNVYANP--PAKVEWFRD--GTAIT-----------------LGGRIDMHVS--SEKHSLLVRHIKD 58 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p--~~~~~w~~~--~~~~~-----------------~~~~~~~~~~--~~~~~l~i~~~~~ 58 (126)
++.+.+|+++.|.|.+.+.+ .+.+.|+++ +..+. ...++.+..+ .....|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 88 (219)
T 1c1e_H 9 PELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNLKN 88 (219)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSCCG
T ss_pred CeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCCCc
Confidence 45788999999999998765 678999986 32211 1245555432 2356899999999
Q ss_pred CCCEEEEEEEecCCce----eEEEEEEEecC---CCCeecc-C--cceeCCCeeEEEEEEcc
Q psy12132 59 TDFGNYMCQASNNLGS----SQQFIQLSGIP---NIPVFQK-S--SRRLGPDGYRLVWQVDT 110 (126)
Q Consensus 59 ~d~g~y~C~~~~~~~~----~~~~~~l~~~~---~~~~~~~-~--~~~~~~~~~~l~~~~~~ 110 (126)
.|.|.|.|.+.+..+. ......+.+.. .+|.+.. . .....++.+.|+|.+.+
T Consensus 89 ~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g 150 (219)
T 1c1e_H 89 EDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKG 150 (219)
T ss_dssp GGCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECCCSSSCCSSEEEEEEEEEE
T ss_pred ccCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecCccccccCCeEEEEEEccc
Confidence 9999999999987531 11233444432 1232221 1 12346788999999977
No 220
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.48 E-value=1.4e-12 Score=75.64 Aligned_cols=110 Identities=18% Similarity=0.243 Sum_probs=71.6
Q ss_pred ceeccCCccEEEEEEeeec-------CCCeeEEEECCEE------ec-----------cCCcEEEEec--CCeEEEEEec
Q psy12132 2 HSITAPDMRAEIICNVYAN-------PPAKVEWFRDGTA------IT-----------LGGRIDMHVS--SEKHSLLVRH 55 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~-------p~~~~~w~~~~~~------~~-----------~~~~~~~~~~--~~~~~l~i~~ 55 (126)
.+.+.+|+++.|.|.+.+. +.+.+.|++++.. +. ...++.+..+ ..+..|.|.+
T Consensus 9 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~ 88 (214)
T 2zg1_A 9 SVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLSIGD 88 (214)
T ss_dssp EEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEEECS
T ss_pred EEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEEEcc
Confidence 4677899999999998754 4678999997642 10 1235544332 1345799999
Q ss_pred CCCCCCEEEEEEEecCCceeE----EEEEEEec--CCCCeeccCcceeCCCeeEEEEEEccC
Q psy12132 56 IKDTDFGNYMCQASNNLGSSQ----QFIQLSGI--PNIPVFQKSSRRLGPDGYRLVWQVDTY 111 (126)
Q Consensus 56 ~~~~d~g~y~C~~~~~~~~~~----~~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~ 111 (126)
++..|.|.|.|.+.+..+... ..+.|.+. +.+|.+........++.+.|+|.+.+.
T Consensus 89 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~G~~v~L~C~~~~~ 150 (214)
T 2zg1_A 89 ARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHFLEPLESGRPTRLSCSLPGS 150 (214)
T ss_dssp CCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC--CCCCTTCCEEEEEECTTC
T ss_pred CCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceecCccccCCCeEEEEEEeccC
Confidence 999999999999987653221 23444443 234444332223467889999999664
No 221
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.47 E-value=3.1e-12 Score=74.50 Aligned_cols=112 Identities=16% Similarity=0.180 Sum_probs=71.9
Q ss_pred ceeccCCccEEEEEEeeec--CCCeeEEEECC-----EEe-------------ccCCcEEEEecCCeEEEEEecCCCCCC
Q psy12132 2 HSITAPDMRAEIICNVYAN--PPAKVEWFRDG-----TAI-------------TLGGRIDMHVSSEKHSLLVRHIKDTDF 61 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~--p~~~~~w~~~~-----~~~-------------~~~~~~~~~~~~~~~~l~i~~~~~~d~ 61 (126)
++.+.+|+++.|.|.+.+. +.+.+.|++.. ..+ ....++.+........|.|.+++..|.
T Consensus 8 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 87 (215)
T 3nl4_H 8 GRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTTEDT 87 (215)
T ss_dssp CCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCGGGC
T ss_pred CEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCcccC
Confidence 4678899999999999763 35689998732 111 123566665555667899999999999
Q ss_pred EEEEEEEecCCce----eEEEEEEEec---CCCCeec-cC--cceeCCCeeEEEEEEccCCc
Q psy12132 62 GNYMCQASNNLGS----SQQFIQLSGI---PNIPVFQ-KS--SRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 62 g~y~C~~~~~~~~----~~~~~~l~~~---~~~~~~~-~~--~~~~~~~~~~l~~~~~~~~~ 113 (126)
|.|.|.+.+..+. ......+.+. ..+|.+. .. .....++.+.|.|.+.+..|
T Consensus 88 G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~~~~p 149 (215)
T 3nl4_H 88 ATYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLP 149 (215)
T ss_dssp EEEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCCTTCCC--CEEEEEEEEEEBS
T ss_pred EEEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCCccccCCCcEEEEEEEeeeeC
Confidence 9999999886432 2222334443 1233322 11 12345778999999977544
No 222
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.47 E-value=2e-13 Score=77.73 Aligned_cols=105 Identities=13% Similarity=0.264 Sum_probs=70.2
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEE--ecc------------CCcEEEEe---cCCeEEEEEecCCCCCCEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTA--ITL------------GGRIDMHV---SSEKHSLLVRHIKDTDFGNY 64 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~--~~~------------~~~~~~~~---~~~~~~l~i~~~~~~d~g~y 64 (126)
.+.+.+|+++.|.|.+.+.|.+.+.|++++.. +.. ..++.... ..+...|.|.++...|.|.|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 83 (184)
T 2ny1_B 4 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 83 (184)
T ss_dssp EEEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEE
T ss_pred cEEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEE
Confidence 35788999999999998888899999998752 211 11222221 11234699999999999999
Q ss_pred EEEEecCCceeEEEEEEEecCCCCeeccCcceeCCCeeEEEEEEccCC
Q psy12132 65 MCQASNNLGSSQQFIQLSGIPNIPVFQKSSRRLGPDGYRLVWQVDTYS 112 (126)
Q Consensus 65 ~C~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 112 (126)
+|.+.+..+. ..+.+..... ........++.+.|.|...+.+
T Consensus 84 ~C~~~~~~~~--~~l~V~~~~~----~~~~~v~~g~~~~l~C~~~~~p 125 (184)
T 2ny1_B 84 ICEVEDQKEE--VQLLVFGLTA----NSDTHLLQGQSLTLTLESPPGS 125 (184)
T ss_dssp EEEETTEEEE--EEEEEEEEEE----SSCSEEETTCCEEEEEECCTTC
T ss_pred EEEEEcCCCc--EEEEEEEecC----CCCceeecCCCEEEEEEcCCCC
Confidence 9999987542 2232221111 1112345788899999997754
No 223
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.47 E-value=3.5e-13 Score=77.35 Aligned_cols=78 Identities=17% Similarity=0.247 Sum_probs=63.5
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLS 82 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~ 82 (126)
+.+..|+.+.|.|.+.+.|.+.+.|++++..+....+ ... ....|.|.++...|.|.|+|.+.|..|.....+.|.
T Consensus 123 ~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~--~~~--~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 198 (201)
T 3s97_C 123 VYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAE--IST--SGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIY 198 (201)
T ss_dssp EEEETTCCEEEEEEEEEESCCEEEEEETTBCCCTTCE--EET--TTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred eEEecCCcEEEEEEccCCCCCceEEEeCCCcCCCcee--ecC--CCCEEEEccCChhhCEEEEEEEEecCCceeeeEEEE
Confidence 4567899999999999999999999999886654322 221 123899999999999999999999999888888777
Q ss_pred ec
Q psy12132 83 GI 84 (126)
Q Consensus 83 ~~ 84 (126)
+.
T Consensus 199 V~ 200 (201)
T 3s97_C 199 VQ 200 (201)
T ss_dssp EE
T ss_pred Ee
Confidence 64
No 224
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.47 E-value=2.3e-13 Score=79.73 Aligned_cols=109 Identities=11% Similarity=0.174 Sum_probs=72.6
Q ss_pred ceeccCCccEEEEEEeeecCC-CeeEEEECCEE-----ec----cC----CcEE----------EEecCCeEEEEEecCC
Q psy12132 2 HSITAPDMRAEIICNVYANPP-AKVEWFRDGTA-----IT----LG----GRID----------MHVSSEKHSLLVRHIK 57 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~-~~~~w~~~~~~-----~~----~~----~~~~----------~~~~~~~~~l~i~~~~ 57 (126)
++.+.+|+++.|.|.+.+.+. +.+.|++++.. +. .. .++. +..+ ..|.|.++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~---~~L~i~~v~ 85 (231)
T 2pet_A 9 LVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQ---GRLVLAEAQ 85 (231)
T ss_dssp EEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTT---CCEEESSCC
T ss_pred cEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCC---ceEEEcccC
Confidence 467889999999999998885 89999975422 11 01 1111 2222 249999999
Q ss_pred CCCCEEEEEEEecCC-ceeEEEEEEEecC--CCCeeccCcc---eeCCCee-EEEEEE-ccCCc
Q psy12132 58 DTDFGNYMCQASNNL-GSSQQFIQLSGIP--NIPVFQKSSR---RLGPDGY-RLVWQV-DTYSA 113 (126)
Q Consensus 58 ~~d~g~y~C~~~~~~-~~~~~~~~l~~~~--~~~~~~~~~~---~~~~~~~-~l~~~~-~~~~~ 113 (126)
..|.|.|+|.+.+.. +.....+.|.+.. ..+.+..... ...++.+ .|.|.. .+.++
T Consensus 86 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~ 149 (231)
T 2pet_A 86 VGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPA 149 (231)
T ss_dssp GGGCEEEEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSC
T ss_pred cccCceEEEEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccC
Confidence 999999999999875 6666666666543 3333333222 2245566 999998 56554
No 225
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.46 E-value=4.1e-12 Score=83.06 Aligned_cols=112 Identities=11% Similarity=0.064 Sum_probs=75.4
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
++.+.+|+++.|.|.+.+.+...+.|++++..+.....+.. .+....+|.|.++...|.|.|+|.+.+..+.....+.+
T Consensus 57 ~~~v~~g~~~~L~c~~~~~~~~~~~W~~~~~~l~~~~~~~~-~~r~~~SL~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~v 135 (527)
T 3qs9_E 57 AVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDL-QNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTV 135 (527)
T ss_dssp EEEECSSCCEEEEEECSCCSSCEEEEEETTEEECCCCBC------CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEE
T ss_pred eEEEeccccEEEEEEEecCCceeEEEEecCCccCcccccCC-CcceEEEEEECcCChhhCeeEEEEEEeccccEEEEEEE
Confidence 36788999999999999888889999999887654444432 12223469999999999999999999988877777777
Q ss_pred EecCCCCeecc-CcceeCCCeeEEEEEEccCCcc
Q psy12132 82 SGIPNIPVFQK-SSRRLGPDGYRLVWQVDTYSAI 114 (126)
Q Consensus 82 ~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~ 114 (126)
.+.+.+..... +.....++...|.|.+.|.++.
T Consensus 136 ~v~~~~~~~~~~p~~~~~~~~~~L~C~a~G~P~P 169 (527)
T 3qs9_E 136 SIRNTLLYTLRRPYFRKMENQDALVCISESVPEP 169 (527)
T ss_dssp EEC-----CEEEEEEEECSSSSCEEEEEEESSCC
T ss_pred EECCceeeccCCCcEEecCCceEEEEEEceecCC
Confidence 66532211111 1112234566899999887553
No 226
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.46 E-value=8.7e-13 Score=79.85 Aligned_cols=82 Identities=15% Similarity=0.260 Sum_probs=62.5
Q ss_pred eeccCCccEEEEEEeeecCCCe-eEEEECCEEe----ccCCcEEEE---ecCCeEEEEEecCCCCCCEEEEEEEecCCce
Q psy12132 3 SITAPDMRAEIICNVYANPPAK-VEWFRDGTAI----TLGGRIDMH---VSSEKHSLLVRHIKDTDFGNYMCQASNNLGS 74 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~-~~w~~~~~~~----~~~~~~~~~---~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 74 (126)
..+.+|+++.|.|.+.+.|.|. +.|++++..+ ......... .......|.|.++...|.|.|+|.+.|..|.
T Consensus 198 ~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~ 277 (290)
T 2o26_X 198 HLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGS 277 (290)
T ss_dssp CCCCTTCCEEEEEEEEESSTTCEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCE
T ss_pred ceEecCCcEEEEEEEecCCcceeEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCc
Confidence 3567899999999999999996 9999987652 222222111 1122358999999999999999999999999
Q ss_pred eEEEEEEEec
Q psy12132 75 SQQFIQLSGI 84 (126)
Q Consensus 75 ~~~~~~l~~~ 84 (126)
....+.|.+.
T Consensus 278 ~~~~~~l~V~ 287 (290)
T 2o26_X 278 ANVTTTLKVV 287 (290)
T ss_dssp EEEEEEECC-
T ss_pred EEEEEEEEEE
Confidence 8888887764
No 227
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.46 E-value=2.7e-13 Score=78.71 Aligned_cols=112 Identities=19% Similarity=0.239 Sum_probs=72.9
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEEC--CEEec------------cCCcEEEEecCCeEEEEEecCCCCCCEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRD--GTAIT------------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQ 67 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~--~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 67 (126)
.+.+.+|+++.|.|.+.+.|.+.+.|+++ +..+. ...++..........|.|.++...|.|.|.|.
T Consensus 8 ~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 87 (212)
T 1nfd_E 8 SASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYYCL 87 (212)
T ss_dssp EEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEEEE
T ss_pred eEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEEEE
Confidence 45678999999999988887788999984 22221 13566655555567899999999999999999
Q ss_pred EecC-Ccee--EEEEEEEe--cC-CCCeecc-Cc--ceeCCCeeEEEEEEccCCc
Q psy12132 68 ASNN-LGSS--QQFIQLSG--IP-NIPVFQK-SS--RRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 68 ~~~~-~~~~--~~~~~l~~--~~-~~~~~~~-~~--~~~~~~~~~l~~~~~~~~~ 113 (126)
+.+. .+.. .....+.+ .+ .+|.+.. .. ....++.+.|.|.+.+..|
T Consensus 88 ~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p 142 (212)
T 1nfd_E 88 SSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPSPEELRTNKATLVCLVNDFYP 142 (212)
T ss_dssp EEETTTTEEEECCCEEEEEECCCCBCCEEECCCCCHHHHHTTEECCCEEEEEEBS
T ss_pred EEcccCcccccCCceEEEEccCCCCCCEEEeeCCchHhccCCceEEEEEEEeeEC
Confidence 9962 2111 11223333 21 2333332 11 1234678999999977633
No 228
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.46 E-value=4.4e-12 Score=74.03 Aligned_cols=110 Identities=16% Similarity=0.268 Sum_probs=72.0
Q ss_pred ceeccCCccEEEEEEeeecC--CCeeEEEECC--E---Ee-c---------------cCCcEEEEec--CCeEEEEEecC
Q psy12132 2 HSITAPDMRAEIICNVYANP--PAKVEWFRDG--T---AI-T---------------LGGRIDMHVS--SEKHSLLVRHI 56 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p--~~~~~w~~~~--~---~~-~---------------~~~~~~~~~~--~~~~~l~i~~~ 56 (126)
.+.+.+|+++.|.|.+.+.+ .+.+.|++++ . .+ . ...++.+..+ .....|.|.++
T Consensus 9 ~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 88 (220)
T 1pz5_B 9 GGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMNNL 88 (220)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred CEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEccC
Confidence 46788999999999998766 6789999842 1 11 0 0245655432 23568999999
Q ss_pred CCCCCEEEEEEEecCCcee---EEEEEEEecC---CCCeecc-C--cceeCCCeeEEEEEEccC
Q psy12132 57 KDTDFGNYMCQASNNLGSS---QQFIQLSGIP---NIPVFQK-S--SRRLGPDGYRLVWQVDTY 111 (126)
Q Consensus 57 ~~~d~g~y~C~~~~~~~~~---~~~~~l~~~~---~~~~~~~-~--~~~~~~~~~~l~~~~~~~ 111 (126)
+..|.|.|.|.+.+..+.. .....+.+.. .+|.+.. . .....++.+.|+|.+.+.
T Consensus 89 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~ 152 (220)
T 1pz5_B 89 RAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPGCSDTSGSSVTLGCLVKGY 152 (220)
T ss_dssp CGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCSCCSCSSSEEEEEEEEEE
T ss_pred CHHHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcccccccCCCCcEEEEEEEEEE
Confidence 9999999999999864321 1223444331 2333221 1 123457889999999776
No 229
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.45 E-value=1.7e-12 Score=80.43 Aligned_cols=103 Identities=19% Similarity=0.227 Sum_probs=72.6
Q ss_pred ceeccCCccEEEEEEeeecCC-----------CeeEEEECCE------Eec---cCCcEEEEecCCeEEEEEecCCCCCC
Q psy12132 2 HSITAPDMRAEIICNVYANPP-----------AKVEWFRDGT------AIT---LGGRIDMHVSSEKHSLLVRHIKDTDF 61 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~-----------~~~~w~~~~~------~~~---~~~~~~~~~~~~~~~l~i~~~~~~d~ 61 (126)
++.+.+|+.+.|.|.+.+.|. +.+.|++++. .+. ...++. ...+ .|.|.++...|.
T Consensus 16 ~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~-~~~~---~L~i~~~~~~D~ 91 (349)
T 4dep_C 16 QIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRIS-KEKD---VLWFRPTLLNDT 91 (349)
T ss_dssp CCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEE-EETT---EEEESSCCGGGC
T ss_pred eEEEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEe-ecCC---EEEEccCChhhC
Confidence 467889999999999987654 8999999773 111 112222 2222 799999999999
Q ss_pred EEEEEEEecCCceeEEEEEEEecCCCCeecc------CcceeCCCeeEEEEEE
Q psy12132 62 GNYMCQASNNLGSSQQFIQLSGIPNIPVFQK------SSRRLGPDGYRLVWQV 108 (126)
Q Consensus 62 g~y~C~~~~~~~~~~~~~~l~~~~~~~~~~~------~~~~~~~~~~~l~~~~ 108 (126)
|.|+|.+.|..+.....+.|.+...+..... ......++.+.|.|..
T Consensus 92 G~Y~C~a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~ 144 (349)
T 4dep_C 92 GNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPN 144 (349)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCS
T ss_pred EEEEEEEecCCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCC
Confidence 9999999998888877777776543332211 1123467789999974
No 230
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.45 E-value=1.4e-13 Score=85.56 Aligned_cols=108 Identities=13% Similarity=0.107 Sum_probs=78.0
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCE-EEEEEEecCCceeEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFG-NYMCQASNNLGSSQQFIQ 80 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g-~y~C~~~~~~~~~~~~~~ 80 (126)
++.+.+|+++.|.|.+.+.|.+.+.|++++..+...... ........|.|.++...|.| .|+|.+.+..|.....+.
T Consensus 167 ~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~--~~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~ 244 (347)
T 2ifg_A 167 NASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMK--SGGLPSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQ 244 (347)
T ss_dssp SSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECC--CCCSSEEEEEEESCCSTTTTCCEEECCEETTEECCEEEC
T ss_pred ceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeeccccc--ceecccceEEEeeCChHHCCCeEEEEEEcCCCCEEEEEE
Confidence 346788999999999999999999999987543211100 01223458999999999999 999999999888777776
Q ss_pred EEecCCCCeeccCcceeCCCeeEEEEEEccCCc
Q psy12132 81 LSGIPNIPVFQKSSRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 81 l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 113 (126)
+.+...|..... ....++.+.|.|.+.|.++
T Consensus 245 l~V~~~P~i~~~--~~~~g~~v~l~C~~~g~P~ 275 (347)
T 2ifg_A 245 VNVSFPASVQLH--TAVEMHHWCIPFSVDGQPA 275 (347)
T ss_dssp CCCBEEEEEEEC--CCEESSSEEEEEEEEEESC
T ss_pred EEEcCCCeeeec--cCccCceEEEEEEeeecCC
Confidence 665433322122 2235678999999987744
No 231
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.45 E-value=1.3e-13 Score=85.07 Aligned_cols=102 Identities=17% Similarity=0.206 Sum_probs=76.7
Q ss_pred ceeccCCccEEEEEEee-------ecCCCeeEEEECCEEe--ccC--CcEEEEecCCeEEEEEecCCCCCCEEEEEEEec
Q psy12132 2 HSITAPDMRAEIICNVY-------ANPPAKVEWFRDGTAI--TLG--GRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASN 70 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~-------~~p~~~~~w~~~~~~~--~~~--~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~ 70 (126)
++.+.+|+++.|.|.+. +.|.+.+.|++++..+ ... .++. ..++ .|.|.++...|.|.|+|.+.+
T Consensus 27 ~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~-~~~~---~L~i~~v~~~D~G~Y~C~~~n 102 (339)
T 3o4o_C 27 REFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMW-AQDG---ALWLLPALQEDSGTYVCTTRN 102 (339)
T ss_dssp CEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEE-EETT---EEEESSBCTTCCEEEECCEEE
T ss_pred EEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEE-eeCC---eEEECCCCcccCEEEEEEEEC
Confidence 46788999999999997 8889999999988763 222 2332 2233 799999999999999999999
Q ss_pred CCceeEEEEEEEecCCCCee----ccCcceeCCCeeEEEEE
Q psy12132 71 NLGSSQQFIQLSGIPNIPVF----QKSSRRLGPDGYRLVWQ 107 (126)
Q Consensus 71 ~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~l~~~ 107 (126)
..|.....+.|.+...++.. ........++.+.|.|.
T Consensus 103 ~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~ 143 (339)
T 3o4o_C 103 ASYCDKMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCP 143 (339)
T ss_dssp TTEEEEEEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECC
T ss_pred CcceEEEEEEEEEEcCCCccccccccceEEECCCCEEEEec
Confidence 88878778777775443321 11223457888999998
No 232
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.45 E-value=1.2e-12 Score=77.18 Aligned_cols=85 Identities=20% Similarity=0.427 Sum_probs=63.3
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEE----CCEEeccCCcEEEE--------ecCCeEEEEEecCCCCCCEEEEEEEec
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFR----DGTAITLGGRIDMH--------VSSEKHSLLVRHIKDTDFGNYMCQASN 70 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~----~~~~~~~~~~~~~~--------~~~~~~~l~i~~~~~~d~g~y~C~~~~ 70 (126)
..+..|+.+.|.|.+.+.|.+.+.|++ ++..+......... .......|.|.++...|.|.|+|.+.|
T Consensus 124 ~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N 203 (241)
T 3grw_A 124 QTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATN 203 (241)
T ss_dssp EECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEEEEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEEC
T ss_pred ceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeeeeeeEeeeeecCCceEEEECcCCcccCcEEEEEEec
Confidence 456779999999999999999999999 77665433221110 011235799999999999999999999
Q ss_pred CCceeEEEEEEEecCCC
Q psy12132 71 NLGSSQQFIQLSGIPNI 87 (126)
Q Consensus 71 ~~~~~~~~~~l~~~~~~ 87 (126)
..|.....+.|.+...+
T Consensus 204 ~~g~~~~~~~l~V~~~p 220 (241)
T 3grw_A 204 FIGVAEKAFWLSVHGPR 220 (241)
T ss_dssp SSCEEEEEEEEEC----
T ss_pred CcceEEEEEEEEecCCC
Confidence 99999888888875433
No 233
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.45 E-value=6.8e-13 Score=78.03 Aligned_cols=112 Identities=19% Similarity=0.252 Sum_probs=72.1
Q ss_pred ceeccCCccEEEEEEeeecCC-C-eeEEEECC--EEe---c---------cCCcEEEEecCCeEEEEEecCCCCCCEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPP-A-KVEWFRDG--TAI---T---------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYM 65 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~-~-~~~w~~~~--~~~---~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~ 65 (126)
.+.+.+|+++.|.|.+.+.+. + .+.|++++ ..+ . ...++..........|.|.+++..|.|.|.
T Consensus 28 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 107 (234)
T 2j6e_L 28 SASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYY 107 (234)
T ss_dssp CCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCSEEE
T ss_pred cEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCEEEE
Confidence 356788999999999987543 4 69999852 111 0 124565554455678999999999999999
Q ss_pred EEEecCCce---eEEEEEEEecC---CCCeecc-Cc--ceeCCCeeEEEEEEccCCc
Q psy12132 66 CQASNNLGS---SQQFIQLSGIP---NIPVFQK-SS--RRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 66 C~~~~~~~~---~~~~~~l~~~~---~~~~~~~-~~--~~~~~~~~~l~~~~~~~~~ 113 (126)
|.+.+..+. ......+.+.. .+|.+.. .+ ....++.+.|.|.+.+..|
T Consensus 108 C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p 164 (234)
T 2j6e_L 108 CATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFFP 164 (234)
T ss_dssp EEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEECCCHHHHTTSCCCEEECCCBCSS
T ss_pred EEEEcCCcceeEecCCEEEEEecCCCCCCcccccCCChhHhcCCceEEEEEEEEEcC
Confidence 999987662 12223333321 2232221 11 1234668999999977544
No 234
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.45 E-value=2.8e-12 Score=76.13 Aligned_cols=109 Identities=17% Similarity=0.310 Sum_probs=68.7
Q ss_pred eeccCCccEEEEEEeeecCCCe-----eEEEECCEEec--------cCCcEEEEe----------cCCeEEEEEecCCCC
Q psy12132 3 SITAPDMRAEIICNVYANPPAK-----VEWFRDGTAIT--------LGGRIDMHV----------SSEKHSLLVRHIKDT 59 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~-----~~w~~~~~~~~--------~~~~~~~~~----------~~~~~~l~i~~~~~~ 59 (126)
+.+..|+++.|.|.+.+.|.+. +.|++++.... ......... ...+..|.|.+++..
T Consensus 13 ~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v~~~ 92 (248)
T 3pv7_A 13 QITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPGIQLE 92 (248)
T ss_dssp EEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESSCCGG
T ss_pred eEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCCCCHH
Confidence 4678899999999999888775 99998532110 001000000 112346999999999
Q ss_pred CCEEEEEEEecCCceeEEEEEEEecCCCCeecc-CcceeCCCeeEEEEEEccC
Q psy12132 60 DFGNYMCQASNNLGSSQQFIQLSGIPNIPVFQK-SSRRLGPDGYRLVWQVDTY 111 (126)
Q Consensus 60 d~g~y~C~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~ 111 (126)
|.|.|+|.+.+..+.....+.|.+...|.+... ......+..+.|+|.+.+.
T Consensus 93 D~G~Y~C~~~~~~~~~~~~~~L~V~~~P~v~~~~~~~~~~~~~~~L~C~~~g~ 145 (248)
T 3pv7_A 93 EAGEYRCEVVVTPLKAQGTVQLEVVASPASRLLLDQVGMKENEDKYMCESSGF 145 (248)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEEEEBCCEEEEECC--------CEEEEEEEEE
T ss_pred HCeEEEEEEEeCCccceeEEEEEEecCCceEEecCCccccCCCcEEEEEEccE
Confidence 999999999998777777777776543332222 1222345678899999773
No 235
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.45 E-value=3.9e-12 Score=73.77 Aligned_cols=109 Identities=18% Similarity=0.240 Sum_probs=70.8
Q ss_pred ceeccCCccEEEEEEeeecC--CCeeEEEEC--CEEe---c-------------cCCcEEEEec--CCeEEEEEecCCCC
Q psy12132 2 HSITAPDMRAEIICNVYANP--PAKVEWFRD--GTAI---T-------------LGGRIDMHVS--SEKHSLLVRHIKDT 59 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p--~~~~~w~~~--~~~~---~-------------~~~~~~~~~~--~~~~~l~i~~~~~~ 59 (126)
.+.+.+|+++.|.|.+.+.+ .+.+.|+++ +... . ...++.+..+ .....|.|.+++..
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~ 88 (210)
T 3d9a_H 9 PSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTE 88 (210)
T ss_dssp CSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred CEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCCcc
Confidence 35678999999999998765 478999984 2111 0 1346655432 23568999999999
Q ss_pred CCEEEEEEEecCCceeEEEEEEEec---CCCCeec-cC--cceeCCCeeEEEEEEccC
Q psy12132 60 DFGNYMCQASNNLGSSQQFIQLSGI---PNIPVFQ-KS--SRRLGPDGYRLVWQVDTY 111 (126)
Q Consensus 60 d~g~y~C~~~~~~~~~~~~~~l~~~---~~~~~~~-~~--~~~~~~~~~~l~~~~~~~ 111 (126)
|.|.|.|.+.+.. .......+.+. +.+|.+. .. .....++.+.|+|.+.+.
T Consensus 89 D~G~Y~C~~~~~~-~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~ 145 (210)
T 3d9a_H 89 DTATYYCANWDGD-YWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGY 145 (210)
T ss_dssp GCEEEEEEETTSS-CBCCCEEEEECCCCCBCCEEEEECCTTSCCCSSEEEEEEEEEEE
T ss_pred cCEEEEEEEecCc-ccccceEEEeccCCCCCCEEEEecCCcccccCCcEEEEEEEeeE
Confidence 9999999998853 11112233332 1233322 11 123467889999999776
No 236
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.45 E-value=5.9e-12 Score=74.59 Aligned_cols=120 Identities=13% Similarity=0.098 Sum_probs=73.5
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEE--------------CCEEeccC----CcEEEEec-CCeEEEEEecCCCCCCE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFR--------------DGTAITLG----GRIDMHVS-SEKHSLLVRHIKDTDFG 62 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~--------------~~~~~~~~----~~~~~~~~-~~~~~l~i~~~~~~d~g 62 (126)
.+.+.+|+++.|.| ..+.+.+.+.|++ ++...... .++.+... .....|.|.+++..|.|
T Consensus 11 ~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G 89 (245)
T 4ei6_B 11 HQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQPTALEDSA 89 (245)
T ss_dssp EEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEECSCCGGGCE
T ss_pred eEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEECCCCHhHCE
Confidence 36788999999999 6567888999998 22211111 55655442 34568999999999999
Q ss_pred EEEEEEecC----CceeEEEEEEEecC-----CCCee-ccCcc---eeCCCeeEEEEEEccCCcceeEEEEEEE
Q psy12132 63 NYMCQASNN----LGSSQQFIQLSGIP-----NIPVF-QKSSR---RLGPDGYRLVWQVDTYSAIIQYLLKFRE 123 (126)
Q Consensus 63 ~y~C~~~~~----~~~~~~~~~l~~~~-----~~~~~-~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~r~ 123 (126)
.|.|.+.+. .........+.+.. .+|.. ...+. ...++.+.|.|...+..|.. ..+.|.+
T Consensus 90 ~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~-~~v~W~~ 162 (245)
T 4ei6_B 90 VYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDH-VELSWWV 162 (245)
T ss_dssp EEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSC-EEEEEEE
T ss_pred EEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCC-eEEEEEE
Confidence 999999852 22222233344332 23322 22111 12367899999987754422 2445544
No 237
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.45 E-value=1.2e-11 Score=72.48 Aligned_cols=112 Identities=11% Similarity=0.172 Sum_probs=72.6
Q ss_pred ceeccCCccEEEEEEeeecC--CCeeEEEECC--E---Eec--------------cCCcEEEEecC--CeEEEEEecCCC
Q psy12132 2 HSITAPDMRAEIICNVYANP--PAKVEWFRDG--T---AIT--------------LGGRIDMHVSS--EKHSLLVRHIKD 58 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p--~~~~~w~~~~--~---~~~--------------~~~~~~~~~~~--~~~~l~i~~~~~ 58 (126)
++.+.+|+++.|.|.+.+.+ .+.+.|++.. . .+. ...++.+..+. ....|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (223)
T 1dee_B 9 GGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSLRA 88 (223)
T ss_dssp CCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSCCG
T ss_pred CEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCCCH
Confidence 46788999999999998765 4789999842 1 110 12466655432 357899999999
Q ss_pred CCCEEEEEEEecCCc------eeEEEEEEEecC---CCCeecc-C--cceeCCCeeEEEEEEccCCc
Q psy12132 59 TDFGNYMCQASNNLG------SSQQFIQLSGIP---NIPVFQK-S--SRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 59 ~d~g~y~C~~~~~~~------~~~~~~~l~~~~---~~~~~~~-~--~~~~~~~~~~l~~~~~~~~~ 113 (126)
.|.|.|.|.+.+..+ .......|.|.. .+|.+.. . .....++.+.|.|.+.+..|
T Consensus 89 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P 155 (223)
T 1dee_B 89 EDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVSCENSNPSSTVAVGCLAQDFLP 155 (223)
T ss_dssp GGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEECTTCCCSSSEEEEEEEEEEEBS
T ss_pred HHCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecCCcccCCCCcEEEEEEEEEEeC
Confidence 999999999988642 111223455432 2333221 1 11246778999999977633
No 238
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.45 E-value=1.3e-12 Score=78.09 Aligned_cols=122 Identities=13% Similarity=0.171 Sum_probs=69.1
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEEC--C---EEec-cC-------------CcEEEE--ecCCeEEEEEecCCCCC
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRD--G---TAIT-LG-------------GRIDMH--VSSEKHSLLVRHIKDTD 60 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~--~---~~~~-~~-------------~~~~~~--~~~~~~~l~i~~~~~~d 60 (126)
.+.+.+|+++.|.|.+.+.+.+.+.|++. + ..+. .. .+.... .......|.|.+++..|
T Consensus 11 ~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 90 (259)
T 3omz_A 11 SVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMILRNLIEND 90 (259)
T ss_dssp CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEEESSCCGGG
T ss_pred eeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEEECCCCccc
Confidence 46778999999999999888889999982 1 1111 00 011111 11223579999999999
Q ss_pred CEEEEEEEecCCc---eeEEEEEEEecCC----------------CCeeccC---cceeCCCeeEEEEEEccCCcceeEE
Q psy12132 61 FGNYMCQASNNLG---SSQQFIQLSGIPN----------------IPVFQKS---SRRLGPDGYRLVWQVDTYSAIIQYL 118 (126)
Q Consensus 61 ~g~y~C~~~~~~~---~~~~~~~l~~~~~----------------~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~ 118 (126)
+|.|.|.+.+..+ .......|.+... .+.+... .....++.+.|.|...+..+.. ..
T Consensus 91 sG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~-~v 169 (259)
T 3omz_A 91 SGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTLNCLYETSWWSY-YI 169 (259)
T ss_dssp CEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEECCEEECCCSSC-EE
T ss_pred CEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEEEEECCCccCCc-eE
Confidence 9999999998654 2222333443321 1222222 2245788999999886542222 24
Q ss_pred EEEEEe
Q psy12132 119 LKFRER 124 (126)
Q Consensus 119 ~~~r~~ 124 (126)
.|||..
T Consensus 170 ~W~k~~ 175 (259)
T 3omz_A 170 FWYKRL 175 (259)
T ss_dssp EEEEEC
T ss_pred EEeeeC
Confidence 455543
No 239
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.45 E-value=8.6e-12 Score=82.91 Aligned_cols=107 Identities=11% Similarity=0.270 Sum_probs=77.4
Q ss_pred eccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCcee-EEEEEEE
Q psy12132 4 ITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSS-QQFIQLS 82 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~-~~~~~l~ 82 (126)
.+..|+.+.|.|.+.+ |.+.+.|++++..+....++.+... ...|.|.++...|.|.|+|.+.+..+.. ...+.|.
T Consensus 122 ~v~~g~~v~l~C~~~~-p~~~v~W~~~g~~l~~~~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~ 198 (642)
T 1e07_A 122 PVEDKDAVAFTCEPET-QDATYLWWVNNQSLPVSPRLQLSNG--NRTLTLFNVTRNDTASYKCETQNPVSARRSDSVILN 198 (642)
T ss_pred eEecCCcEEEEEECCC-CCeeEEEEECCeECCCCCceEEcCC--CCEEEEeCCCcccCeeEEEEEecCCCCcccceEEEE
Confidence 3567889999999987 8899999999988876666655432 2489999999999999999999877643 3445555
Q ss_pred ecC--CCCeecc-CcceeCCCeeEEEEEEccCCc
Q psy12132 83 GIP--NIPVFQK-SSRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 83 ~~~--~~~~~~~-~~~~~~~~~~~l~~~~~~~~~ 113 (126)
+.. ..+.+.. ......++.+.|.|...+.++
T Consensus 199 V~~~p~~~~~~~~~~~~~~G~~~~l~C~~~g~p~ 232 (642)
T 1e07_A 199 VLYGPDAPTISPLNTSYRSGENLNLSCHAASNPP 232 (642)
T ss_pred EEeCCCCcEEecCCcccccCCEEEEEEEcCCCCC
Confidence 442 2222221 222356888999999966654
No 240
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.45 E-value=1.6e-12 Score=80.66 Aligned_cols=112 Identities=15% Similarity=0.264 Sum_probs=75.2
Q ss_pred ceeccCCccEEEEEEeeecC--CCeeEEEEC--CEEec-----------------cCCcEEEEec--CCeEEEEEecCCC
Q psy12132 2 HSITAPDMRAEIICNVYANP--PAKVEWFRD--GTAIT-----------------LGGRIDMHVS--SEKHSLLVRHIKD 58 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p--~~~~~w~~~--~~~~~-----------------~~~~~~~~~~--~~~~~l~i~~~~~ 58 (126)
++.+.+|+++.|.|.+.+.+ .+.+.|+++ +..+. ...++.+..+ .....|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 88 (344)
T 1za6_B 9 AEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSSLRS 88 (344)
T ss_dssp CEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECSCCG
T ss_pred CeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECCCCc
Confidence 46788999999999998763 578999986 32210 1346665543 3456899999999
Q ss_pred CCCEEEEEEEecCCceeEEEEEEEecC---CCCeec-cC--cceeCCCeeEEEEEEccCCc
Q psy12132 59 TDFGNYMCQASNNLGSSQQFIQLSGIP---NIPVFQ-KS--SRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 59 ~d~g~y~C~~~~~~~~~~~~~~l~~~~---~~~~~~-~~--~~~~~~~~~~l~~~~~~~~~ 113 (126)
.|.|.|.|.+.+..+.......|.+.. .+|.+. .. .....++.+.|.|.+.+..|
T Consensus 89 ~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P 149 (344)
T 1za6_B 89 EDTAVYFCTRSLNMAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFP 149 (344)
T ss_dssp GGCEEEEEEETTTTCEECCCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEEEEEBS
T ss_pred ccCEEEEEEEecCcceecCcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEEeeEEC
Confidence 999999999998654443444555432 233222 11 12246788999999977633
No 241
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.44 E-value=2.5e-13 Score=83.79 Aligned_cols=106 Identities=17% Similarity=0.155 Sum_probs=74.1
Q ss_pred ceeccCCccEEEEEEeeec---------CCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCE-EEEEEEecC
Q psy12132 2 HSITAPDMRAEIICNVYAN---------PPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFG-NYMCQASNN 71 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~---------p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g-~y~C~~~~~ 71 (126)
++.+.+|+++.|.|.+.+. |.+.+.|++++..+....+. ...+ .|.|.++...|.| .|+|.+.+.
T Consensus 38 ~v~v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~--~~~~---~L~i~~v~~~D~Gs~Y~C~a~n~ 112 (329)
T 3oq3_B 38 NDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRR--VKNG---DLWIANYTSNDSHRRYLCTVTTK 112 (329)
T ss_dssp EEEECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEECSTT--EETT---EEEESSCCGGGGGCCEEEEEECT
T ss_pred eEEEECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCccccCce--eecc---eEEEcCCChHhCCCcEEEEEEeC
Confidence 3568899999999999874 55789999988665433332 2233 8999999999999 899999998
Q ss_pred CceeEEEEEEEecCCCCeeccC---cceeCCCeeEEEEEEccCC
Q psy12132 72 LGSSQQFIQLSGIPNIPVFQKS---SRRLGPDGYRLVWQVDTYS 112 (126)
Q Consensus 72 ~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~ 112 (126)
.|.........+...+|..... .....++.+.|.|...+.+
T Consensus 113 ~g~~~~~~~~~v~~~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p 156 (329)
T 3oq3_B 113 NGDCVQGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCGILYAK 156 (329)
T ss_dssp TSCEEEEEEEEEECCCCSCEEEEEETTSSTTTCEEEECCCCSCC
T ss_pred CCceeeEEEEEEEcCCCcEeccccceEEeCCCcEEEEeccCCCC
Confidence 8765544433333333332221 1123577899999887765
No 242
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.44 E-value=1.5e-13 Score=80.30 Aligned_cols=112 Identities=15% Similarity=0.123 Sum_probs=72.3
Q ss_pred ceeccCCccEEEEEEeee-cCCCe----eEEEECCEEec-------------cCCcEEEEe-----cCCeEEEEEecCCC
Q psy12132 2 HSITAPDMRAEIICNVYA-NPPAK----VEWFRDGTAIT-------------LGGRIDMHV-----SSEKHSLLVRHIKD 58 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~-~p~~~----~~w~~~~~~~~-------------~~~~~~~~~-----~~~~~~l~i~~~~~ 58 (126)
++.+.+|+++.|.|.+.+ .+.+. +.|++++.... ...++.+.. ...+..|.|.+++.
T Consensus 8 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~ 87 (221)
T 3eow_R 8 QVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLRV 87 (221)
T ss_dssp CCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCSSC
T ss_pred cEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccCCh
Confidence 456788999999999853 34444 99999853211 023444433 11345899999999
Q ss_pred CCCEEEEEEEecCC-ceeEEEEEEEecCCCCeeccC-cceeCCCee-EEEEEEc-cCCc
Q psy12132 59 TDFGNYMCQASNNL-GSSQQFIQLSGIPNIPVFQKS-SRRLGPDGY-RLVWQVD-TYSA 113 (126)
Q Consensus 59 ~d~g~y~C~~~~~~-~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~-~l~~~~~-~~~~ 113 (126)
.|.|.|+|.+.+.. +.....+.|.+...|...... .....++.+ .|+|.+. +.++
T Consensus 88 ~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~P~~~~~~~~~~~~g~~~~~l~C~~~~g~P~ 146 (221)
T 3eow_R 88 EDEGSYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPP 146 (221)
T ss_dssp CCCSCBEEEEEESSSCSCEEECCCCCCCCCEEEEEEECCCCCSSSCCEEEEEEESCSSC
T ss_pred HHCeEEEEEEEeCCCCceEEEEEEEEEECCCceeecCCcccCCceEEEEEEECCCccCC
Confidence 99999999999865 666666666665433222221 111456677 5999986 4443
No 243
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.44 E-value=7e-13 Score=75.60 Aligned_cols=75 Identities=23% Similarity=0.438 Sum_probs=58.2
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEec--cCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAIT--LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQ 80 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~--~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 80 (126)
..+..|+.+.|.|.+.+.|.|.+.|++++..+. ...++....++ .|.|.++...|.|.|+|.+.|..+.......
T Consensus 106 ~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~---~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~ 182 (189)
T 2v44_A 106 QEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANN---NLQILNINKSDEGIYRCEGRVEARGEIDFRD 182 (189)
T ss_dssp EEEETTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEEECTTS---CEEETTCCGGGCEEEEEEEEETTTTEEEEEE
T ss_pred EEEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEEEecCC---cEEEEEcCcccCeEEEEEEEccccCceeeee
Confidence 456789999999999999999999999887764 24455554443 7999999999999999999998765544333
No 244
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.44 E-value=1e-11 Score=72.65 Aligned_cols=112 Identities=14% Similarity=0.193 Sum_probs=73.2
Q ss_pred ceeccCCccEEEEEEeeecC--CCeeEEEECC--E---Eec--------------cCCcEEEEec--CCeEEEEEecCCC
Q psy12132 2 HSITAPDMRAEIICNVYANP--PAKVEWFRDG--T---AIT--------------LGGRIDMHVS--SEKHSLLVRHIKD 58 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p--~~~~~w~~~~--~---~~~--------------~~~~~~~~~~--~~~~~l~i~~~~~ 58 (126)
.+.+.+|+++.|.|.+.+.+ .+.+.|++.. . .+. ...++.+..+ .....|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 88 (220)
T 2fbj_H 9 GGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKVRS 88 (220)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSCCG
T ss_pred CeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCCCh
Confidence 46788999999999998765 5789999842 1 111 1246665543 3456899999999
Q ss_pred CCCEEEEEEEecCCce---eEEEEEEEecC---CCCeecc-C-cceeCCCeeEEEEEEccCCc
Q psy12132 59 TDFGNYMCQASNNLGS---SQQFIQLSGIP---NIPVFQK-S-SRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 59 ~d~g~y~C~~~~~~~~---~~~~~~l~~~~---~~~~~~~-~-~~~~~~~~~~l~~~~~~~~~ 113 (126)
.|.|.|.|.+.+..+. ......|.|.. .+|.+.. . .....++.+.|.|.+.+..|
T Consensus 89 ~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~g~~v~L~C~~~g~~P 151 (220)
T 2fbj_H 89 EDTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLTLPPALSSDPVIIGCLIHDYFP 151 (220)
T ss_dssp GGCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEECCCSSSCCSSEEEEEEEEEEBS
T ss_pred hhCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEeecccccCCCcEEEEEEEEeEEC
Confidence 9999999999886442 11223444432 2233221 1 11245778999999976644
No 245
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.44 E-value=2.9e-13 Score=87.25 Aligned_cols=79 Identities=22% Similarity=0.423 Sum_probs=63.3
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEecc---CCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITL---GGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFI 79 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~---~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 79 (126)
+.+.+|+++.|.|.+.|.|.|.+.|++++..+.. ..++....++ .|.|.++...|.|.|+|.+.|..|...+.+
T Consensus 395 ~~v~~G~~v~l~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~---~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~ 471 (477)
T 2id5_A 395 VFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDG---TLEVRYAQVQDNGTYLCIAANAGGNDSMPA 471 (477)
T ss_dssp EEEETTCCEEECCCEEEESCCEEEEECTTSCBC-------CEECTTS---CEEESSCCSTTCEEEEEEEEETTEEEEEEE
T ss_pred EEEeCCCeEEEEEeccccCCCEEEEEECCccccccCCCceEEeCCCC---EEEEeeCChHHCEEEEEEEEeCCCcEEEEE
Confidence 5678899999999999999999999998866542 2344333333 699999999999999999999999888887
Q ss_pred EEEec
Q psy12132 80 QLSGI 84 (126)
Q Consensus 80 ~l~~~ 84 (126)
.+.|.
T Consensus 472 ~l~V~ 476 (477)
T 2id5_A 472 HLHVR 476 (477)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 77653
No 246
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.44 E-value=5.6e-12 Score=82.88 Aligned_cols=107 Identities=11% Similarity=0.239 Sum_probs=77.2
Q ss_pred eeccCCccEEEEEEeeecCCCee----EEEE--CCE--Eecc---------CCcEEEEec--CCeEEEEEecCCCCCCEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKV----EWFR--DGT--AITL---------GGRIDMHVS--SEKHSLLVRHIKDTDFGN 63 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~----~w~~--~~~--~~~~---------~~~~~~~~~--~~~~~l~i~~~~~~d~g~ 63 (126)
+.+.+|+++.|.|.+.+.|.+.+ .|++ ++. .+.. ..++.+... .+...|.|.++...|.|.
T Consensus 341 ~~~~~G~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~ 420 (585)
T 2ocw_A 341 VKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGF 420 (585)
T ss_pred eEEEeCCcEEEEEecCCCCCccEEEEEEEEccCCCCCceeeeecceeecccCCCEEEeccCCCcEEEEEECCCChhhCEE
Confidence 45678999999999999999877 7998 775 3321 234444322 123459999999999999
Q ss_pred EEEEEecCCceeEEEEEEEecCCCCeecc--CcceeCCCeeEEEEEEcc
Q psy12132 64 YMCQASNNLGSSQQFIQLSGIPNIPVFQK--SSRRLGPDGYRLVWQVDT 110 (126)
Q Consensus 64 y~C~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~ 110 (126)
|+|.+ |..|.....+.|.+...+|.+.. ......++.+.|+|...+
T Consensus 421 Y~C~a-n~~g~~~~~~~l~V~~~~p~~~~~~~~~v~~G~~v~L~C~~~~ 468 (585)
T 2ocw_A 421 YWCLT-NGDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKVPCHFPC 468 (585)
T ss_pred EEEcc-cCCCccceeEEEEEecCccccccCCceeEecCCcEEEEEEecC
Confidence 99998 88887778888887654444333 223456788999999853
No 247
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.44 E-value=4.2e-13 Score=80.36 Aligned_cols=104 Identities=17% Similarity=0.204 Sum_probs=69.8
Q ss_pred ceeccCCccEEEEEEee---ecCCCeeEEEECCEEecc------------------CCcEEEEe--cCCeEEEEEecCCC
Q psy12132 2 HSITAPDMRAEIICNVY---ANPPAKVEWFRDGTAITL------------------GGRIDMHV--SSEKHSLLVRHIKD 58 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~---~~p~~~~~w~~~~~~~~~------------------~~~~~~~~--~~~~~~l~i~~~~~ 58 (126)
++.+.+|+++.|.|.+. +.+.+.+.|++++..... ..++.+.. ...+..|.|.++..
T Consensus 14 ~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 93 (268)
T 3mj6_A 14 QLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSLLLQDVQK 93 (268)
T ss_dssp EEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCCEEECSCCG
T ss_pred ceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEEEEECCCCH
Confidence 45778999999999987 666778999985432110 12333211 11235799999999
Q ss_pred CCCEEEEEEEecCCce--eEEEEEEEecCCCCeeccCcceeCCCeeEEEEEE
Q psy12132 59 TDFGNYMCQASNNLGS--SQQFIQLSGIPNIPVFQKSSRRLGPDGYRLVWQV 108 (126)
Q Consensus 59 ~d~g~y~C~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~ 108 (126)
.|.|.|+|.+.+..+. ....+.+.+.+..|. ......++.+.|.|..
T Consensus 94 ~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~p~---~~~v~~G~~v~L~C~~ 142 (268)
T 3mj6_A 94 ADEGIYTCEIRLKNESMVMKKPVELWVLPEEPR---DLRVRVGDTTQMRCSI 142 (268)
T ss_dssp GGCEEEEEEEEETTCCCEEEEEEEEEEECCCCS---EEEEETTCCEEECCBC
T ss_pred hHCEEEEEEEEecCCcceEEEEEEEEEeccCCC---ccccccCCcEEEEEEe
Confidence 9999999999876443 345566666544332 2234567889999988
No 248
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.44 E-value=1e-12 Score=76.39 Aligned_cols=77 Identities=23% Similarity=0.417 Sum_probs=61.8
Q ss_pred eeccCCccEEEEEEe-eecCCCeeEEEECCEEecc--------CCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCc
Q psy12132 3 SITAPDMRAEIICNV-YANPPAKVEWFRDGTAITL--------GGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLG 73 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~-~~~p~~~~~w~~~~~~~~~--------~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~ 73 (126)
..+..|+.+.|.|.+ .+.|.+.+.|++++..+.. ..++.....+ .|.|.++...|.|.|+|.+.|..|
T Consensus 118 ~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~a~N~~G 194 (217)
T 2vr9_A 118 TRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRIVDGG---NLLISNVEPIDEGNYKCIAQNLVG 194 (217)
T ss_dssp EEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCCSEEEETTT---EEEESSCCSTTCEEEEEEEEETTE
T ss_pred cEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCCcEEecCCC---cEEEeeCCHHHCeEEEEEEEcccc
Confidence 456789999999998 8999999999999988762 2344333333 799999999999999999999998
Q ss_pred eeEEEEEEE
Q psy12132 74 SSQQFIQLS 82 (126)
Q Consensus 74 ~~~~~~~l~ 82 (126)
.......+.
T Consensus 195 ~~~~~~~~l 203 (217)
T 2vr9_A 195 TRESSYAKL 203 (217)
T ss_dssp EEECCCEEE
T ss_pred eeccccEEE
Confidence 776654444
No 249
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.44 E-value=2.7e-13 Score=73.94 Aligned_cols=74 Identities=19% Similarity=0.425 Sum_probs=56.2
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEecc----------CCcEEEEe---cCCeEEEEEecCCCCCCEEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITL----------GGRIDMHV---SSEKHSLLVRHIKDTDFGNYMCQA 68 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~----------~~~~~~~~---~~~~~~l~i~~~~~~d~g~y~C~~ 68 (126)
++.+.+|+++.|.|.+.+.|.|.+.|++++..+.. ..++.... ......|.|.++...|.|.|+|.+
T Consensus 30 ~~~v~~G~~v~L~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 109 (137)
T 3qr2_A 30 SQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTLVEEDTGTYECRA 109 (137)
T ss_dssp CEEEETTSCEEEEEEEECSSCCEEEEEEEESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEEECSCCGGGCEEEEEEE
T ss_pred CEEEeCCCCEEEEEEEeeecCCeEEEEECCCCccccceeecccCcccceEEecccccccceEEEECCCCcccCEEEEEEE
Confidence 45677899999999999999999999997654321 11222211 112458999999999999999999
Q ss_pred ecCCcee
Q psy12132 69 SNNLGSS 75 (126)
Q Consensus 69 ~~~~~~~ 75 (126)
.|..|..
T Consensus 110 ~N~~G~~ 116 (137)
T 3qr2_A 110 SNDPDRN 116 (137)
T ss_dssp ECCTTSS
T ss_pred EecCCcc
Confidence 9988765
No 250
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.44 E-value=2e-12 Score=79.09 Aligned_cols=82 Identities=20% Similarity=0.212 Sum_probs=66.0
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEE-----EEecC-------CeEEEEEecCCCCC-CEEEEEEEe
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRID-----MHVSS-------EKHSLLVRHIKDTD-FGNYMCQAS 69 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~-----~~~~~-------~~~~l~i~~~~~~d-~g~y~C~~~ 69 (126)
+.+..|+.+.|.|.+.+.|.|.+.|++++..+....... ..... ....|.|.++...| .|.|+|.+.
T Consensus 219 ~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~ 298 (315)
T 1itb_B 219 MEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAK 298 (315)
T ss_dssp EECCSSSCEEEEEEEEECTTSEEEEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEE
T ss_pred EEEeCCCcEEEEEEEecCCCCeeEEEECCEECCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEe
Confidence 457789999999999999999999999998876543211 11110 13489999999999 999999999
Q ss_pred cCCceeEEEEEEEec
Q psy12132 70 NNLGSSQQFIQLSGI 84 (126)
Q Consensus 70 ~~~~~~~~~~~l~~~ 84 (126)
|..|.....+.|.+.
T Consensus 299 N~~G~~~~~~~l~v~ 313 (315)
T 1itb_B 299 NTHGIDAAYIQLIYP 313 (315)
T ss_dssp CTTCCEEEEEEEECC
T ss_pred cCCCceeEEEEEEec
Confidence 999999988888764
No 251
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.44 E-value=8e-13 Score=81.60 Aligned_cols=115 Identities=17% Similarity=0.242 Sum_probs=80.7
Q ss_pred eccCCccEEEEEE-----eeecCCCeeEEEECCEEeccC-CcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCc----
Q psy12132 4 ITAPDMRAEIICN-----VYANPPAKVEWFRDGTAITLG-GRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLG---- 73 (126)
Q Consensus 4 ~~~~g~~~~l~C~-----~~~~p~~~~~w~~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~---- 73 (126)
.+..|+.+.|.|. +.+.|.+.+.|++++..+... .++..... ...|.|.++...|.|.|+|.+.|..|
T Consensus 131 ~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~~~~~~--~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 208 (339)
T 3o4o_C 131 ILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFLSVRG--TTHLLVHDVALEDAGYYRCVLTFAHEGQQY 208 (339)
T ss_dssp EEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSEEECTT--SSEEEESSCCGGGCEEEEEEEECCBTTBCC
T ss_pred EEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCceeEEcCC--cceEEEcccCHhhCeEEEEEEEECCCCeEE
Confidence 4678999999999 788899999999999877644 34443322 23899999999999999999998766
Q ss_pred eeEEEEEEEecC----CCCeeccCcc---eeCCCeeEEEEEE---ccCCcceeEEEEEE
Q psy12132 74 SSQQFIQLSGIP----NIPVFQKSSR---RLGPDGYRLVWQV---DTYSAIIQYLLKFR 122 (126)
Q Consensus 74 ~~~~~~~l~~~~----~~~~~~~~~~---~~~~~~~~l~~~~---~~~~~~~~~~~~~r 122 (126)
.....+.|.+.. .+|.+...+. ...++.+.|.|.. .+.++.. .++|.
T Consensus 209 ~~~~~~~l~V~~~~~~~~P~i~~~~~~~~v~~G~~v~L~C~~~~~~g~P~~~--~v~W~ 265 (339)
T 3o4o_C 209 NITRSIELRIKKKKEETIPVIISPLKTISASLGSRLTIPCKVFLGTGTPLTT--MLWWT 265 (339)
T ss_dssp EEEEEEEEEEECCCCCCCCEECCCSCCCCCCCCSCCCCCCCEEESSSCCSSC--EEEEE
T ss_pred EEEEEEEEEEEcCCCCCCCEEecCCceeEeccCCCEEEEEEEECCCCCCCCc--eEEEE
Confidence 345566666542 2344443322 3457789999998 6665323 34454
No 252
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.44 E-value=4.8e-12 Score=75.94 Aligned_cols=110 Identities=15% Similarity=0.170 Sum_probs=69.8
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEEC--CEE---e---------ccC----CcEEEEec-CCeEEEEEecCCCCCCEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRD--GTA---I---------TLG----GRIDMHVS-SEKHSLLVRHIKDTDFGN 63 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~--~~~---~---------~~~----~~~~~~~~-~~~~~l~i~~~~~~d~g~ 63 (126)
+.+.+|+++.|.|.+. .+.+.+.|++. +.. + ... .++.+... ..+..|.|.+++..|.|.
T Consensus 36 v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G~ 114 (268)
T 3pl6_D 36 KVTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQRTERGDSAV 114 (268)
T ss_dssp EEEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEECSCCGGGCEE
T ss_pred EEecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEECCCCcccCEE
Confidence 5678999999999986 67789999982 211 1 111 45555442 235789999999999999
Q ss_pred EEEEEecC--CceeEEEEEEEecC-----CCCe-eccCcc---eeCCCeeEEEEEEccCCc
Q psy12132 64 YMCQASNN--LGSSQQFIQLSGIP-----NIPV-FQKSSR---RLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 64 y~C~~~~~--~~~~~~~~~l~~~~-----~~~~-~~~~~~---~~~~~~~~l~~~~~~~~~ 113 (126)
|.|.+.+. .........+.+.. .+|. ....+. ...++.+.|+|.+.+..|
T Consensus 115 Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p 175 (268)
T 3pl6_D 115 YLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYP 175 (268)
T ss_dssp EEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBS
T ss_pred EEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccC
Confidence 99999873 22222233344332 1332 222111 123678999999977544
No 253
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.43 E-value=4.1e-12 Score=76.94 Aligned_cols=123 Identities=13% Similarity=0.196 Sum_probs=75.5
Q ss_pred ceeccCCccEEEEEEeeec--CCCeeEEEECC--EE---e-c-------------cCCcEEEEe--cCCeEEEEEecCCC
Q psy12132 2 HSITAPDMRAEIICNVYAN--PPAKVEWFRDG--TA---I-T-------------LGGRIDMHV--SSEKHSLLVRHIKD 58 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~--p~~~~~w~~~~--~~---~-~-------------~~~~~~~~~--~~~~~~l~i~~~~~ 58 (126)
.+.+.+|++++|.|.+.+. +.+.+.|++.. .. + . ...++.+.. ......|.|.++..
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (280)
T 3fku_X 9 AEVKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRSLRS 88 (280)
T ss_dssp CCEECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECSCCS
T ss_pred CEEECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECCCCh
Confidence 4567899999999999765 55789998732 10 0 0 113555542 23456899999999
Q ss_pred CCCEEEEEEEecC---------CceeEEEEEEEecC--------------CCCeeccC--cceeCCCeeEEEEEEccCCc
Q psy12132 59 TDFGNYMCQASNN---------LGSSQQFIQLSGIP--------------NIPVFQKS--SRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 59 ~d~g~y~C~~~~~---------~~~~~~~~~l~~~~--------------~~~~~~~~--~~~~~~~~~~l~~~~~~~~~ 113 (126)
.|+|.|.|.+.+. .........|.+.. .++.+... .....++.+.|.|...+..+
T Consensus 89 ~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~v~~G~~v~L~C~~~~~~~ 168 (280)
T 3fku_X 89 EDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPPSVSKGLRQTATLTCTGNSNNV 168 (280)
T ss_dssp TTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCSEEEECTTCCEEEEEECCCCCC
T ss_pred hhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCCcEEEecCCCEEEEEEecCCCC
Confidence 9999999999876 11122223344433 12333322 22456889999999976322
Q ss_pred ceeEEEEEEEe
Q psy12132 114 IIQYLLKFRER 124 (126)
Q Consensus 114 ~~~~~~~~r~~ 124 (126)
......|||+.
T Consensus 169 ~~~~v~W~r~~ 179 (280)
T 3fku_X 169 GNQGAAWLQQH 179 (280)
T ss_dssp CTTCCEEEEEC
T ss_pred CCceEEEEEEC
Confidence 11234456643
No 254
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.43 E-value=1.3e-12 Score=76.04 Aligned_cols=82 Identities=12% Similarity=0.089 Sum_probs=60.7
Q ss_pred eccCCccEEEEEEeeecCC--CeeEEEECCEEeccCCc-EEEEe-------cCCeEEEEEecCCCCCCEEEEEEEecCCc
Q psy12132 4 ITAPDMRAEIICNVYANPP--AKVEWFRDGTAITLGGR-IDMHV-------SSEKHSLLVRHIKDTDFGNYMCQASNNLG 73 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~p~--~~~~w~~~~~~~~~~~~-~~~~~-------~~~~~~l~i~~~~~~d~g~y~C~~~~~~~ 73 (126)
.+.+|+++.|.|.+.+.|. +.+.|++++..+..... ..... ......|.|.+++..|.|.|+|.+.|..|
T Consensus 116 ~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g 195 (213)
T 2x1w_L 116 ELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLM 195 (213)
T ss_dssp EEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEEEEEEEESSCCGGGCEEEEEEEECSSC
T ss_pred EEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCccceeeeEEEEECCCCcccCEEEEEEEecCCC
Confidence 6778999999999998654 47999998765321111 00000 11234799999999999999999999999
Q ss_pred eeEEEEEEEecC
Q psy12132 74 SSQQFIQLSGIP 85 (126)
Q Consensus 74 ~~~~~~~l~~~~ 85 (126)
...+.+.|.|..
T Consensus 196 ~~~~~~~l~V~~ 207 (213)
T 2x1w_L 196 TKKNSTFVRVHE 207 (213)
T ss_dssp EEEEEEEEEEEC
T ss_pred cEEEEEEEEEec
Confidence 988888888754
No 255
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.43 E-value=8.1e-14 Score=82.00 Aligned_cols=111 Identities=13% Similarity=0.270 Sum_probs=58.1
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECC--EEe---c---------cCCcEEEEecCCeEEEEEecCCCCCCEEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDG--TAI---T---------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQA 68 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~--~~~---~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 68 (126)
+.+.+|+++.|.|.+.+.+.+.+.|++++ ..+ . ...++.....+....|.|.+++..|.|.|.|.+
T Consensus 33 ~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 112 (233)
T 3bqu_C 33 LSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLSEDVADYYCLQ 112 (233)
T ss_dssp C-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----CCCCSEEEEEE
T ss_pred EEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCHHHCEEEEEEE
Confidence 45788999999999988888889998842 111 0 112333222233458999999999999999999
Q ss_pred ecCCcee-E--EEEEEEecCCCCeecc-Cc--ceeCCCeeEEEEEEccCCc
Q psy12132 69 SNNLGSS-Q--QFIQLSGIPNIPVFQK-SS--RRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 69 ~~~~~~~-~--~~~~l~~~~~~~~~~~-~~--~~~~~~~~~l~~~~~~~~~ 113 (126)
.+..+.. . ..+.+.....+|.... .+ ....++.+.|+|.+.+..|
T Consensus 113 ~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p 163 (233)
T 3bqu_C 113 SDNLPYTFGGGTNLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYP 163 (233)
T ss_dssp CSSSSCCBCCCCBC---CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBS
T ss_pred ecCCceeecCCEEEEEeCCCCCCEEEEeCCCHHhhcCCceEEEEEEccccC
Confidence 8765422 1 1222222222333322 11 1224678999999977544
No 256
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.43 E-value=5.7e-12 Score=76.07 Aligned_cols=84 Identities=19% Similarity=0.283 Sum_probs=64.0
Q ss_pred eccCCccEEEEEEeee-cCCCeeEEEECCEEeccCCcEEEEec--CCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEE
Q psy12132 4 ITAPDMRAEIICNVYA-NPPAKVEWFRDGTAITLGGRIDMHVS--SEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQ 80 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~-~p~~~~~w~~~~~~~~~~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 80 (126)
.+.+|+++.|.|.+.+ .|.+.+.|++++..+........... .....|.|.++...|.|.|+|.+.|..|...+.+.
T Consensus 197 ~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~ 276 (289)
T 3ejj_X 197 VRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMN 276 (289)
T ss_dssp ECCSSSCEEEEEEEEESSSCCEEEEEETTEECCCCEEEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEE
T ss_pred EEEeCCcEEEEEEeCCCCCceEEEEEECCEEeeccCCcccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCccccEE
Confidence 4468999999999998 78899999999987754322111100 11348999999999999999999999999999998
Q ss_pred EEecCCC
Q psy12132 81 LSGIPNI 87 (126)
Q Consensus 81 l~~~~~~ 87 (126)
|.+...+
T Consensus 277 L~~~~~~ 283 (289)
T 3ejj_X 277 FQVVESH 283 (289)
T ss_dssp EECC---
T ss_pred EEEEecc
Confidence 8865433
No 257
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.43 E-value=3.9e-12 Score=74.62 Aligned_cols=112 Identities=13% Similarity=0.168 Sum_probs=73.2
Q ss_pred ceeccCCccEEEEEEeeecC--CCeeEEEECC--EE---ec--------------cCCcEEEEec--CCeEEEEEecCCC
Q psy12132 2 HSITAPDMRAEIICNVYANP--PAKVEWFRDG--TA---IT--------------LGGRIDMHVS--SEKHSLLVRHIKD 58 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p--~~~~~w~~~~--~~---~~--------------~~~~~~~~~~--~~~~~l~i~~~~~ 58 (126)
.+.+.+|+++.|.|.+.+.+ .+.+.|++.. .. +. ...++.+..+ .....|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (225)
T 1op3_H 9 GGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMRV 88 (225)
T ss_dssp CEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCCCh
Confidence 45688999999999998776 6789999842 11 10 1246655543 2456899999999
Q ss_pred CCCEEEEEEEecCCc-----e---eEEEEEEEecC---CCCee-ccCc--ceeCCCeeEEEEEEccCCc
Q psy12132 59 TDFGNYMCQASNNLG-----S---SQQFIQLSGIP---NIPVF-QKSS--RRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 59 ~d~g~y~C~~~~~~~-----~---~~~~~~l~~~~---~~~~~-~~~~--~~~~~~~~~l~~~~~~~~~ 113 (126)
.|.|.|.|.+.+..+ . ......|.|.. .+|.. ...+ ....++.+.|.|.+.+..|
T Consensus 89 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P 157 (225)
T 1op3_H 89 EDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFP 157 (225)
T ss_dssp GGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCTTCCCCCEEEEEEEEEEEBS
T ss_pred hhCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccccccCCCcEEEEEEEEeEEC
Confidence 999999999998753 1 11223444432 22322 2111 2245788999999976533
No 258
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.43 E-value=4e-13 Score=81.24 Aligned_cols=107 Identities=16% Similarity=0.165 Sum_probs=74.9
Q ss_pred eeccCCccEEEEEEeeecCC--CeeEEEEC-CEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeE-EE
Q psy12132 3 SITAPDMRAEIICNVYANPP--AKVEWFRD-GTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQ-QF 78 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~--~~~~w~~~-~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~-~~ 78 (126)
+.+.+|+++.|.|.+.+ |. +.+.|+++ +..+....++.....+ .|.|.++...|.|.|+|.+.+..+... ..
T Consensus 99 ~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~ 174 (292)
T 4dkd_C 99 VVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRHTNYSFSPWH---GFTIHRAKFIQSQDYQCSALMGGRKVMSIS 174 (292)
T ss_dssp EEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSSCCEECCSSS---CCEETTCCGGGCSEEEEEECSTTSCEECCC
T ss_pred EEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCccccCCcccccCCc---eEEECCCCHHHCeEEEEEEEeCCCceeEEE
Confidence 45678999999999986 44 78999996 5555444454443333 499999999999999999998766443 35
Q ss_pred EEEEecC---CCCeeccCcc---eeCCCeeEEEEEEccCCc
Q psy12132 79 IQLSGIP---NIPVFQKSSR---RLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 79 ~~l~~~~---~~~~~~~~~~---~~~~~~~~l~~~~~~~~~ 113 (126)
+.|.+.. .+|.+...+. ...++.+.|.|...+.++
T Consensus 175 ~~l~V~~~~~~~p~i~~~~~~~~~~~g~~v~l~C~~~~~~~ 215 (292)
T 4dkd_C 175 IRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCSASSVDV 215 (292)
T ss_dssp EEEEEECCCCSSCEEEEESSCBCCCSSSCEEEEEEEEESSS
T ss_pred EEEEEeCCCCCCCeEEccCCceeEecCCCEEEEEEecCCCC
Confidence 5555543 2444433222 246888999999976654
No 259
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.43 E-value=1.5e-11 Score=72.94 Aligned_cols=121 Identities=12% Similarity=0.201 Sum_probs=73.9
Q ss_pred ceeccCCccEEEEEEeeec--CCCeeEEEECC--E---Eec--------------cCCcEEEEecC--CeEEEEEecCCC
Q psy12132 2 HSITAPDMRAEIICNVYAN--PPAKVEWFRDG--T---AIT--------------LGGRIDMHVSS--EKHSLLVRHIKD 58 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~--p~~~~~w~~~~--~---~~~--------------~~~~~~~~~~~--~~~~l~i~~~~~ 58 (126)
.+.+.+|+++.|.|.+.+. +.+.+.|++.. . .+. ...++.+..+. ....|.|.+++.
T Consensus 10 ~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 89 (242)
T 1hxm_B 10 SSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLTIHNVEK 89 (242)
T ss_dssp EEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEEECSCCG
T ss_pred eEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEEECCCCc
Confidence 4567899999999999875 56789999842 1 111 23456554322 457899999999
Q ss_pred CCCEEEEEEEecCCc-------eeEEEEEEEecCC------CC--eeccC--cceeCCCeeEEEEEEccCCcceeEEEEE
Q psy12132 59 TDFGNYMCQASNNLG-------SSQQFIQLSGIPN------IP--VFQKS--SRRLGPDGYRLVWQVDTYSAIIQYLLKF 121 (126)
Q Consensus 59 ~d~g~y~C~~~~~~~-------~~~~~~~l~~~~~------~~--~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 121 (126)
.|.|.|.|.+.+... .......|.+... +| ....+ .....++.+.|+|.+.+..|. ...+.|
T Consensus 90 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~~~g~~v~L~C~~~g~~P~-~~~v~W 168 (242)
T 1hxm_B 90 QDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPD-VIKIHW 168 (242)
T ss_dssp GGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGGGSSSCEEEEEEEEEESSC-CEEEEE
T ss_pred ccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhcccCCCceEEEEEeeEECC-CeEEEE
Confidence 999999999886420 1111234444321 12 11111 111247789999999776442 124555
Q ss_pred EE
Q psy12132 122 RE 123 (126)
Q Consensus 122 r~ 123 (126)
.+
T Consensus 169 ~~ 170 (242)
T 1hxm_B 169 EE 170 (242)
T ss_dssp EE
T ss_pred Ec
Confidence 54
No 260
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.43 E-value=2.1e-12 Score=78.09 Aligned_cols=82 Identities=13% Similarity=0.202 Sum_probs=62.0
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCc-EEEEe----cCCeEEEEEecCCCCCCEEEEEEEecCCceeEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGR-IDMHV----SSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQ 77 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~-~~~~~----~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 77 (126)
..+.+|+++.|.|.+.+.|.+.+.|++++........ ..... ......|.|.++...|.|.|+|.+.|..|....
T Consensus 191 ~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~ 270 (289)
T 3mjg_X 191 TVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQD 270 (289)
T ss_dssp SEEETTSCEEEEEEEESCSSBEEEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTEEE
T ss_pred ceeEcCCCEEEEEEECCCCCcceEEEcCCccCCCcccccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCcee
Confidence 3567899999999999999999999986654322111 11111 112358999999999999999999999999888
Q ss_pred EEEEEec
Q psy12132 78 FIQLSGI 84 (126)
Q Consensus 78 ~~~l~~~ 84 (126)
...|.+.
T Consensus 271 ~~~l~v~ 277 (289)
T 3mjg_X 271 EKAINIT 277 (289)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 8877764
No 261
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.42 E-value=1.1e-11 Score=76.02 Aligned_cols=105 Identities=10% Similarity=0.090 Sum_probs=70.0
Q ss_pred ccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcE-EEEecCCeEEEEEecCCCCCCEEEEEEEecCCcee-----EEE
Q psy12132 5 TAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRI-DMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSS-----QQF 78 (126)
Q Consensus 5 ~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~-~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~-----~~~ 78 (126)
+.+|+++.|.|.+. .+.+.+.|++++..+...... ..........|.|.++...|.|.|+|.+.|..+.. ...
T Consensus 130 v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~ 208 (316)
T 3vh8_G 130 VKSGERVILQCWSD-IMFEHFFLHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDP 208 (316)
T ss_dssp EETTCCEEEEEEES-SCCSEEEEEETTCCSCCEEEECEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCC
T ss_pred cCCCCeEEEEEcCC-CCCcEEEEEECCCccccceeeeeecCCCceEEEEECCCChhhCceEEEEEecCCCCccccCCCCC
Confidence 56899999999995 567789999988665322111 11111233579999999999999999999876631 333
Q ss_pred EEEEec--CCCCeeccCc--ceeCCCeeEEEEEEcc
Q psy12132 79 IQLSGI--PNIPVFQKSS--RRLGPDGYRLVWQVDT 110 (126)
Q Consensus 79 ~~l~~~--~~~~~~~~~~--~~~~~~~~~l~~~~~~ 110 (126)
+.+.+. ..+|.+...+ ....++.+.|.|....
T Consensus 209 ~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~ 244 (316)
T 3vh8_G 209 LDIVVTGPYEKPSLSAQPGPKVQAGESVTLSCSSRS 244 (316)
T ss_dssp EEEEEECSSCCCEEEEESCSCCCTTSCCEEEEEESS
T ss_pred EEEEecCCCCCCeEEeCCCCeecCCCcEEEEEECCC
Confidence 444442 3444443322 2356889999999864
No 262
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.42 E-value=1.9e-12 Score=75.22 Aligned_cols=112 Identities=13% Similarity=0.126 Sum_probs=66.9
Q ss_pred ceeccCCccEEEEEEeeecCCCe---eEEEECCEEecc----------------CCcEEEE-------ecCCeEEEEEec
Q psy12132 2 HSITAPDMRAEIICNVYANPPAK---VEWFRDGTAITL----------------GGRIDMH-------VSSEKHSLLVRH 55 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~---~~w~~~~~~~~~----------------~~~~~~~-------~~~~~~~l~i~~ 55 (126)
++.+..|+++.|.|.+.+.+.+. +.|+|++..+.. ..+.... ....+.+|.|.+
T Consensus 10 ~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~ 89 (225)
T 4fmk_A 10 EVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFRG 89 (225)
T ss_dssp EEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEECS
T ss_pred EEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEcc
Confidence 35678899999999998777664 789996532210 0111111 111245799999
Q ss_pred CCCCCCEEEEEEEecCCceeEEEE-EEEecCCCCeec--cCcceeCCCeeEEEEEEccCCc
Q psy12132 56 IKDTDFGNYMCQASNNLGSSQQFI-QLSGIPNIPVFQ--KSSRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 56 ~~~~d~g~y~C~~~~~~~~~~~~~-~l~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~ 113 (126)
++..|.|.|.|.+.+..+...... .+.+...+.... ............+.|...+..|
T Consensus 90 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P 150 (225)
T 4fmk_A 90 LRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCVSTGGRP 150 (225)
T ss_dssp CCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECCBCCSSSCEEEEEEEEEEEBS
T ss_pred CCHHHCcceEEEEEeCCCcceeeeeeeeeecCCceeecccceeecceeeeeeeeeecCCCC
Confidence 999999999999988665443333 333332222221 1222334556677776644433
No 263
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.42 E-value=5.1e-12 Score=85.98 Aligned_cols=108 Identities=15% Similarity=0.252 Sum_probs=80.0
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCC-CCCCEEEEEEEecCCce-eEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIK-DTDFGNYMCQASNNLGS-SQQFIQ 80 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~-~~d~g~y~C~~~~~~~~-~~~~~~ 80 (126)
..+..|+++.|.|.+.+.|.+.+.|++++..+....+.....++ .|.|.++. ..|.|.|+|.+.|..|. ....+.
T Consensus 536 ~~v~~G~~v~l~C~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~~---~l~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~~ 612 (816)
T 3dmk_A 536 KAIVAGETLIVTCPVAGYPIDSIVWERDNRALPINRKQKVFPNG---TLIIENVERNSDQATYTCVAKNQEGYSARGSLE 612 (816)
T ss_dssp EEEETTCCEEEECCEECSSEEEEEEEETTEESCCSTTEEECTTS---EEEESSCCHHHHCEEEEEEEEESSSCEEEEEEE
T ss_pred eEEecCCeEEEEEEecCCCCCEEEEEECCeEcccCCceEEecCC---eEEEEecCccccCEEEEEEEEECCCceeeeeEE
Confidence 45668999999999999998999999999988766666555444 79999998 58999999999998774 344555
Q ss_pred EEecCCCCeec---cCcceeCCCeeEEEEEEccCCc
Q psy12132 81 LSGIPNIPVFQ---KSSRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 81 l~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~ 113 (126)
+.+...+.... .......++.+.|.|...+.++
T Consensus 613 v~v~~~p~~~~~~~~~~~~~~G~~v~L~C~~~~~~~ 648 (816)
T 3dmk_A 613 VQVMVLPRIIPFAFEEGPAQVGQYLTLHCSVPGGDL 648 (816)
T ss_dssp EEEECCCCCBCCCCCSSCEESSCEEEEEEBCCCSSS
T ss_pred EEEecCCccccccccccccCCCCeEEEEEEEeCCCC
Confidence 55543333222 1223456889999999866544
No 264
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.41 E-value=2.9e-12 Score=72.88 Aligned_cols=74 Identities=11% Similarity=0.077 Sum_probs=60.5
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLS 82 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~ 82 (126)
..+.+|+++.|.|.+.+.|.+.+.|++++..+. ... ..|.|.++...|.|.|+|.+.+..+.....+.|.
T Consensus 107 ~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~~-------~~~---~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~ 176 (184)
T 2ny1_B 107 THLLQGQSLTLTLESPPGSSPSVQCRSPRGKNI-------QGG---KTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIV 176 (184)
T ss_dssp SEEETTCCEEEEEECCTTCCCEEEEECTTSCEE-------EES---SEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred ceeecCCCEEEEEEcCCCCCCEEEEEeCCCccc-------cCc---eEEEEecCCcCCCeEEEEEEEECCceEEEEEEEE
Confidence 356789999999999989999999998864431 112 3799999999999999999999888888888887
Q ss_pred ecCC
Q psy12132 83 GIPN 86 (126)
Q Consensus 83 ~~~~ 86 (126)
+...
T Consensus 177 V~~~ 180 (184)
T 2ny1_B 177 VLAF 180 (184)
T ss_dssp EECC
T ss_pred EEec
Confidence 6543
No 265
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.41 E-value=3.7e-12 Score=72.96 Aligned_cols=74 Identities=16% Similarity=0.353 Sum_probs=60.0
Q ss_pred eeccCCccEEEEEEeeecCCC-eeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeE-EEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPA-KVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQ-QFIQ 80 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~-~~~~ 80 (126)
..+.+|+.+.|.|.+.+.|.| .+.|++++..+...... .....|.|.++. |.|.|+|.+.|..|... +.+.
T Consensus 116 ~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~-----~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~ 188 (195)
T 2c5d_C 116 RTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGH-----GPQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTAT 188 (195)
T ss_dssp EEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTTS-----SCCEEEEECCCS--SCEEEEEEEEETTEEEECCCEE
T ss_pred EEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCCCc-----CCCCeEEEcccc--cCceEEEEEEcCCCceEEEEEE
Confidence 456789999999999999999 99999999877644332 233479999887 78999999999998775 6777
Q ss_pred EEe
Q psy12132 81 LSG 83 (126)
Q Consensus 81 l~~ 83 (126)
|.+
T Consensus 189 l~V 191 (195)
T 2c5d_C 189 ITV 191 (195)
T ss_dssp EEE
T ss_pred EEE
Confidence 776
No 266
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.41 E-value=9.7e-12 Score=74.57 Aligned_cols=108 Identities=12% Similarity=0.092 Sum_probs=68.9
Q ss_pred eccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEE-EEecCCeEEEEEecCCCCCCEEEEEEEecCC-----ceeEE
Q psy12132 4 ITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRID-MHVSSEKHSLLVRHIKDTDFGNYMCQASNNL-----GSSQQ 77 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~-----~~~~~ 77 (126)
.+.+|++++|.|.+. .+.+.+.|+|++..+....... .........|.|.++...|.|.|+|.+.+.. ...+.
T Consensus 17 ~V~~G~~VtL~C~~~-~~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~~~s~~S~ 95 (257)
T 1b6u_A 17 LVKSEETVILQCWSD-VRFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSVTHSPYQLSAPSD 95 (257)
T ss_dssp EEESSCCEEEEEEES-SCCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEECSSCTTSCCCCCC
T ss_pred EecCCCCEEEEEecC-CCCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEeccCCCccccccCC
Confidence 467899999999997 4577899999875432110000 0011234589999999999999999987532 12233
Q ss_pred EEEEEec--CCCCeeccC--cceeCCCeeEEEEEEccCC
Q psy12132 78 FIQLSGI--PNIPVFQKS--SRRLGPDGYRLVWQVDTYS 112 (126)
Q Consensus 78 ~~~l~~~--~~~~~~~~~--~~~~~~~~~~l~~~~~~~~ 112 (126)
.+.|.+. ..+|.+... .....++.+.|.|...+..
T Consensus 96 ~~~L~V~~~~~~P~l~~~p~~~V~~G~~vtL~C~~~~~~ 134 (257)
T 1b6u_A 96 PLDIVITGLYEKPSLSAQPGPTVLAGESVTLSCSSRSSY 134 (257)
T ss_dssp CEEEEEECSSCCCEEECSSCTTCBTTCEEEEEEECSSCC
T ss_pred CEEEecccCCCCcceEccCCCccCCCCEEEEEEeCCCCC
Confidence 4444443 234444322 2345788999999986654
No 267
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.41 E-value=1.9e-12 Score=73.80 Aligned_cols=74 Identities=26% Similarity=0.395 Sum_probs=59.1
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccC--CcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLG--GRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFI 79 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 79 (126)
..+..|+++.|.|.+.+.|.+.+.|++++..+... .++....++ .|.|.++...|.|.|+|.+.|..+......
T Consensus 110 ~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 185 (191)
T 1epf_A 110 QEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNN---YLQIRGIKKTDEGTYRCEGRILARGEINFK 185 (191)
T ss_dssp EECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEECTTS---CEEETTCCGGGCEEEEEEEEEGGGTEEEEE
T ss_pred EeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEEecCC---eEEECCCChhhCEEEEEEEEEecceeEEEE
Confidence 45678999999999999999999999999887533 355444433 799999999999999999999775444333
No 268
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.41 E-value=1.4e-12 Score=81.29 Aligned_cols=96 Identities=8% Similarity=0.026 Sum_probs=70.7
Q ss_pred eccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEEEe
Q psy12132 4 ITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSG 83 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~~ 83 (126)
.+.+|+++.|.|.+.+.|.+.+.|++++..+. .. ...|.|.++...|.|.|+|.+.+..+.....+.+.+
T Consensus 107 ~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~-------~~---~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v 176 (363)
T 1wio_A 107 HLLQGQSLTLTLESPPGSSPSVQCRSPRGKNI-------QG---GKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVV 176 (363)
T ss_dssp SEESBSCEEEEEECCTTCCCCEEEECSSSCEE-------EE---SSEEEECSBCGGGCEECEEEEEETTEEEEECCEECE
T ss_pred EEecCCCEEEEEEcCCCCCCeEEEEcCCCccc-------cc---ceEEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEE
Confidence 45789999999999889999999999864331 11 237999999999999999999988766666666665
Q ss_pred cCCCCeeccCcceeCCCeeEEEEEEcc
Q psy12132 84 IPNIPVFQKSSRRLGPDGYRLVWQVDT 110 (126)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~l~~~~~~ 110 (126)
...++.. .......++.+.|.|...+
T Consensus 177 ~~~p~~~-~~~~~~~G~~v~l~C~~~~ 202 (363)
T 1wio_A 177 LAFQKAS-SIVYKKEGEQVEFSFPLAF 202 (363)
T ss_dssp ECCSCSE-EEEEEETBCCEEEECCCCC
T ss_pred ecCCCCC-CceEEecCCEEEEEEEEec
Confidence 4322222 2233456788999997755
No 269
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.41 E-value=5.1e-12 Score=80.40 Aligned_cols=110 Identities=17% Similarity=0.314 Sum_probs=73.4
Q ss_pred ceeccCCccEEEEEEeeecCC----CeeEEEECC--EEe------------ccCCcEEEEecCCeEEEEEecCCCCCCEE
Q psy12132 2 HSITAPDMRAEIICNVYANPP----AKVEWFRDG--TAI------------TLGGRIDMHVSSEKHSLLVRHIKDTDFGN 63 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~----~~~~w~~~~--~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 63 (126)
.+.+.+|+++.|.|.+.+.+. +.+.|++++ ..+ ....++.....+....|.|.++...|.|.
T Consensus 10 ~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 89 (438)
T 1qgc_4 10 SLAVSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLTIDPVEADDVAT 89 (438)
T ss_dssp EEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred eEEeeCCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEEeCCCcCcCCee
Confidence 456889999999999987776 389999852 211 11346665555556789999999999999
Q ss_pred EEEEEecCCcee---EEEEEEEecCCCCeecc-Cc--ceeCCCeeEEEEEEccC
Q psy12132 64 YMCQASNNLGSS---QQFIQLSGIPNIPVFQK-SS--RRLGPDGYRLVWQVDTY 111 (126)
Q Consensus 64 y~C~~~~~~~~~---~~~~~l~~~~~~~~~~~-~~--~~~~~~~~~l~~~~~~~ 111 (126)
|+|.+.+..+.. ...+.+.....+|.+.. .+ ....+..+.|.|.+.+.
T Consensus 90 Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~ 143 (438)
T 1qgc_4 90 YYCQQSNEVPLTFGAGTKLDLKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNF 143 (438)
T ss_dssp EEEEECSSTTCCBCCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEE
T ss_pred EEEEEecCCCccccCceeEEecCCCCCCEEEecCCChhhccCCceEEEEEEccc
Confidence 999999876532 23333332222343322 11 12346689999998664
No 270
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.40 E-value=9.9e-12 Score=72.64 Aligned_cols=110 Identities=15% Similarity=0.158 Sum_probs=71.5
Q ss_pred ceeccCCccEEEEEEeeecC--CCeeEEEECC--EE---ec----------------cCCcEEEEec--CCeEEEEEecC
Q psy12132 2 HSITAPDMRAEIICNVYANP--PAKVEWFRDG--TA---IT----------------LGGRIDMHVS--SEKHSLLVRHI 56 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p--~~~~~w~~~~--~~---~~----------------~~~~~~~~~~--~~~~~l~i~~~ 56 (126)
++.+.+|+++.|.|.+.+.+ .+.+.|+++. .. +. ...++.+..+ .....|.|.++
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 88 (222)
T 1q9r_B 9 GGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNTL 88 (222)
T ss_dssp CCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEECSC
T ss_pred ceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEECcC
Confidence 45688999999999998765 6789999842 11 10 1245655543 23568999999
Q ss_pred CCCCCEEEEEEEecCCc-----eeEEEEEEEecC---CCCeecc-C--cceeCCCeeEEEEEEccC
Q psy12132 57 KDTDFGNYMCQASNNLG-----SSQQFIQLSGIP---NIPVFQK-S--SRRLGPDGYRLVWQVDTY 111 (126)
Q Consensus 57 ~~~d~g~y~C~~~~~~~-----~~~~~~~l~~~~---~~~~~~~-~--~~~~~~~~~~l~~~~~~~ 111 (126)
+..|.|.|.|.+.+..+ .......|.+.. .+|.+.. . .....++.+.|+|.+.+.
T Consensus 89 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~ 154 (222)
T 1q9r_B 89 RAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGY 154 (222)
T ss_dssp CGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCCSCCCCSSEEEEEEEEEEE
T ss_pred CcccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccccccccCCCcEEEEEEEccE
Confidence 99999999999988643 111223344322 2333221 1 112357889999999775
No 271
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.40 E-value=2.4e-12 Score=74.35 Aligned_cols=76 Identities=21% Similarity=0.368 Sum_probs=61.5
Q ss_pred ccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeE-EEEEEEe
Q psy12132 5 TAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQ-QFIQLSG 83 (126)
Q Consensus 5 ~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~-~~~~l~~ 83 (126)
+..|+.+.|.|.+.+.| |.+.|++++..+....++...... ..|.|.++...|.|.|+|.+.|..|... ..+.|.+
T Consensus 122 ~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l~~~~~~~~~~~~--~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v 198 (208)
T 3r4d_A 122 VKELDSVTLTCLSNDIG-ANIQWLFNSQSLQLTERMTLSQNN--SILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDI 198 (208)
T ss_dssp CCTTCCEEEEEECSCTT-CEEEEEETTEECCCCSSEEEETTT--TEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECC
T ss_pred EeeCCCEEEEEECCCCC-CceEEEECCEeCCCCCCeEEcCCC--CEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeE
Confidence 56799999999998865 899999999988777676655432 4899999999999999999999988764 3444544
No 272
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.40 E-value=2.7e-12 Score=77.67 Aligned_cols=108 Identities=15% Similarity=0.169 Sum_probs=76.8
Q ss_pred eeccCCccEEEEEEeeecCC-CeeEEE-ECCEEeccCCcEEEEecCCeEEEEEecCCCCCCE-EEEEEEecCCceeE-EE
Q psy12132 3 SITAPDMRAEIICNVYANPP-AKVEWF-RDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFG-NYMCQASNNLGSSQ-QF 78 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~-~~~~w~-~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g-~y~C~~~~~~~~~~-~~ 78 (126)
+.+.+|+.+.|.|.+.+ |. +.+.|+ +++..+....++.....+ .|.|.++...|.| .|+|.+.|..+... ..
T Consensus 101 ~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~~~~~~~~~~---~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~ 176 (290)
T 2o26_X 101 LFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTDLTFVPNPKA---GITIKNVKRAYHRLCVRCAAQRDGTWLHSDK 176 (290)
T ss_dssp EEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTTCEEEEETTT---EEEEESCCGGGTTCEEEEEEEETTEEEECCC
T ss_pred eEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCCCceeeCCCC---CEEEecccHHHCCCEEEEEEEECCceEEeEE
Confidence 45678999999999985 77 899995 577777655555554443 7999999999999 99999999855432 23
Q ss_pred EEEEec---CCCCeeccC---cceeCCCeeEEEEEEccCCcc
Q psy12132 79 IQLSGI---PNIPVFQKS---SRRLGPDGYRLVWQVDTYSAI 114 (126)
Q Consensus 79 ~~l~~~---~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~ 114 (126)
+.+.+. ..+|.+... .....++.+.|.|...+.+..
T Consensus 177 ~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p 218 (290)
T 2o26_X 177 FTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTIKDVSTS 218 (290)
T ss_dssp EEEEEECCCCSCCEEECSCSBCCCCTTCCEEEEEEEEESSTT
T ss_pred EEEEEEeCCCCCCccccCCCcceEecCCcEEEEEEEecCCcc
Confidence 455443 244444322 233567889999999876543
No 273
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.40 E-value=2.1e-12 Score=73.80 Aligned_cols=69 Identities=13% Similarity=0.379 Sum_probs=54.0
Q ss_pred eccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEec-CCCCCCEEEEEEEecCCceeEEEEEEE
Q psy12132 4 ITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRH-IKDTDFGNYMCQASNNLGSSQQFIQLS 82 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~g~y~C~~~~~~~~~~~~~~l~ 82 (126)
....|+++.|.|.+.+ + +.+.|+|++..+.... +..|.|.+ +...|.|.|+|.+.|..|.....+.+.
T Consensus 10 v~~~G~~v~L~C~~~~-~-~~i~W~k~g~~l~~~~---------~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~ 78 (186)
T 1jbj_A 10 VSISGTSVELTCPLDS-D-ENLKWEKNGQELPQKH---------DKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKAR 78 (186)
T ss_dssp EEEETTEEEEECSSCC-C-TTCEEEETTEEECSCC---------CSEEEEESCCTTTSCEEEEEECSSCCCCCCEEECCC
T ss_pred EEeCCcEEEEEEeCCC-C-CceEEEECCEECCCCC---------CCEEEECCCCccccCEEEEEEEEeCCCcEEEEEEEE
Confidence 3467999999999986 4 3499999998876431 12799999 999999999999999888755555554
Q ss_pred e
Q psy12132 83 G 83 (126)
Q Consensus 83 ~ 83 (126)
+
T Consensus 79 v 79 (186)
T 1jbj_A 79 V 79 (186)
T ss_dssp C
T ss_pred E
Confidence 3
No 274
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=99.40 E-value=6.5e-12 Score=65.78 Aligned_cols=70 Identities=19% Similarity=0.442 Sum_probs=54.7
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECC-----EEec---------cCCcEEEEecCCeEEEEEecCCCCCCEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDG-----TAIT---------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQ 67 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~-----~~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 67 (126)
.+.+.+|+++.|.|.+.+.|.+.+.|+++. ..+. ...++..........|.|.+++..|+|.|.|.
T Consensus 10 ~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 89 (108)
T 1jhl_L 10 YLVASPGETITINCRASKSISKSLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSGSGTDFTLTISSLEPEDFAMYICQ 89 (108)
T ss_dssp EEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEESSSEEEEEECSCCTTCCSEEEEE
T ss_pred eeEEcCCCCEEEEeEECCCCCceEEEEEECCCCCCEEEEEcCCCcCCCCCceEEEEecCCEEEEEECCCCHHHCEEEEEE
Confidence 357889999999999998888899999853 1121 12466655444567899999999999999999
Q ss_pred EecC
Q psy12132 68 ASNN 71 (126)
Q Consensus 68 ~~~~ 71 (126)
+.+.
T Consensus 90 ~~n~ 93 (108)
T 1jhl_L 90 QHNE 93 (108)
T ss_dssp ECSS
T ss_pred EccC
Confidence 9875
No 275
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.40 E-value=1.5e-12 Score=77.09 Aligned_cols=77 Identities=18% Similarity=0.262 Sum_probs=56.5
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCC------------------------cEEEEecCCeEEEEEecCCC
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGG------------------------RIDMHVSSEKHSLLVRHIKD 58 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~------------------------~~~~~~~~~~~~l~i~~~~~ 58 (126)
+.+.+|+++.|.|.+.+.|.|.+.|++++..+.... +.... ....|.|.++..
T Consensus 146 ~~v~~g~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~L~i~~v~~ 222 (250)
T 2fbo_J 146 VQVDEGNDITMTCPCTDCANANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFS---GARNLVIRAAKI 222 (250)
T ss_dssp EECCTTCCEEECCCEESCTTCEEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEE---TTTEEEECSCCG
T ss_pred EEecCCCcEEEEEEecCCCCCeeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccC---CccEEEEecCCc
Confidence 455679999999999998999999999887654321 11110 113899999999
Q ss_pred CCCEEEEEEEecCC---ceeEEEEEEE
Q psy12132 59 TDFGNYMCQASNNL---GSSQQFIQLS 82 (126)
Q Consensus 59 ~d~g~y~C~~~~~~---~~~~~~~~l~ 82 (126)
.|.|.|+|.+.|.. |.....+.|.
T Consensus 223 ~D~G~Y~C~a~N~~g~~g~~~~~~~l~ 249 (250)
T 2fbo_J 223 TDAGRVWCELATGQGELDADRSSTILK 249 (250)
T ss_dssp GGCEEEEEEEESSSSGGGEEEEEEEEE
T ss_pred ccCEEEEEEecCCccccCccceeEEEe
Confidence 99999999999944 4445554443
No 276
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.40 E-value=1.3e-11 Score=75.09 Aligned_cols=112 Identities=12% Similarity=0.181 Sum_probs=72.0
Q ss_pred ceeccCCccEEEEEEeeecC--CCeeEEEECC--E---Eec--------------cCCcEEEEec--CCeEEEEEecCCC
Q psy12132 2 HSITAPDMRAEIICNVYANP--PAKVEWFRDG--T---AIT--------------LGGRIDMHVS--SEKHSLLVRHIKD 58 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p--~~~~~w~~~~--~---~~~--------------~~~~~~~~~~--~~~~~l~i~~~~~ 58 (126)
.+.+.+|+++.|.|.+.+.+ .+.+.|+++. . .+. ...++....+ .....|.|.+++.
T Consensus 31 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 110 (291)
T 2gki_A 31 PELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTS 110 (291)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECSCCG
T ss_pred cEEecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECcCCH
Confidence 35678899999999998766 5789999842 1 110 1234444332 2356899999999
Q ss_pred CCCEEEEEEEecCC-cee----EEEEEEEecC---------------CCCeeccCc---ceeCCCeeEEEEEEccCCc
Q psy12132 59 TDFGNYMCQASNNL-GSS----QQFIQLSGIP---------------NIPVFQKSS---RRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 59 ~d~g~y~C~~~~~~-~~~----~~~~~l~~~~---------------~~~~~~~~~---~~~~~~~~~l~~~~~~~~~ 113 (126)
.|+|.|.|.+.+.. |.. .....|.|.. .++.+...+ ....++.+.|+|...+.++
T Consensus 111 ~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~ 188 (291)
T 2gki_A 111 EDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKVTMSCKSSQSLF 188 (291)
T ss_dssp GGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCSEEEEETTSCEEEEEEESSCCE
T ss_pred HHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcEEEEEEcCCccc
Confidence 99999999998763 111 1122444433 122222222 2457889999999976654
No 277
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.40 E-value=5.7e-12 Score=72.86 Aligned_cols=112 Identities=16% Similarity=0.155 Sum_probs=68.7
Q ss_pred ceeccCCccEEEEEEeeecCCCe---eEEEECCEEeccC------------------CcEEEEe---cCCeEEEEEecCC
Q psy12132 2 HSITAPDMRAEIICNVYANPPAK---VEWFRDGTAITLG------------------GRIDMHV---SSEKHSLLVRHIK 57 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~---~~w~~~~~~~~~~------------------~~~~~~~---~~~~~~l~i~~~~ 57 (126)
.+.+..|+++.|.|.+.+.|.+. +.|+|++..+... .++.... ...+.+|.|.+++
T Consensus 8 ~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~ 87 (218)
T 4frw_A 8 VVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRNAV 87 (218)
T ss_dssp EEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEESSCC
T ss_pred eEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEeecc
Confidence 46788999999999998887664 8999865332110 1111111 1123579999999
Q ss_pred CCCCEEEEEEEecCCceeE-EEEEEEecCCCCe-ecc--CcceeCCCeeEEEEEEccCCc
Q psy12132 58 DTDFGNYMCQASNNLGSSQ-QFIQLSGIPNIPV-FQK--SSRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 58 ~~d~g~y~C~~~~~~~~~~-~~~~l~~~~~~~~-~~~--~~~~~~~~~~~l~~~~~~~~~ 113 (126)
..|.|.|.|.+.+..+... ....+.+...++. ... ......+..+.+.|...+.++
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~ 147 (218)
T 4frw_A 88 QADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGSPA 147 (218)
T ss_dssp GGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEEEEBSC
T ss_pred HHHCCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeeccCCcC
Confidence 9999999999887544333 3333333222222 111 122234667888888876655
No 278
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.40 E-value=1.5e-11 Score=72.65 Aligned_cols=111 Identities=14% Similarity=0.179 Sum_probs=68.8
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEEC--------------CEEec---cCCcEEEEe-cCCeEEEEEecCCCCCCEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRD--------------GTAIT---LGGRIDMHV-SSEKHSLLVRHIKDTDFGN 63 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~--------------~~~~~---~~~~~~~~~-~~~~~~l~i~~~~~~d~g~ 63 (126)
.+.+.+|+++.|.|.+.+ +.+.+.|++. +.... ...++.+.. ......|.|.+++..|.|.
T Consensus 11 ~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~ 89 (240)
T 3q5y_A 11 HIIKEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSALELEDSAM 89 (240)
T ss_dssp EEEEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSCCGGGCEE
T ss_pred eeeecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcCChhHCEE
Confidence 367889999999999874 7789999982 11111 124555544 2346789999999999999
Q ss_pred EEEEEecC---CceeEEEEEEEecC-----CCCeec-cCcc---eeCCCeeEEEEEEccCCc
Q psy12132 64 YMCQASNN---LGSSQQFIQLSGIP-----NIPVFQ-KSSR---RLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 64 y~C~~~~~---~~~~~~~~~l~~~~-----~~~~~~-~~~~---~~~~~~~~l~~~~~~~~~ 113 (126)
|.|.+.+. .........+.+.. .+|... ..+. ...++.+.|+|.+.+..|
T Consensus 90 Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P 151 (240)
T 3q5y_A 90 YFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFP 151 (240)
T ss_dssp EEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBS
T ss_pred EEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeEEC
Confidence 99999732 11222222333321 233322 1111 123578999999977433
No 279
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.40 E-value=1.8e-12 Score=82.99 Aligned_cols=81 Identities=25% Similarity=0.397 Sum_probs=63.2
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECC-EEeccC---CcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDG-TAITLG---GRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQ 77 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~-~~~~~~---~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 77 (126)
++.+.+|+++.|.|.+ +.|.|.+.|++++ ..+... .++....++ +|.|.+++..|.|.|+|.+.|..|...+
T Consensus 350 ~~~v~~G~~v~L~C~~-~~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~---~L~I~~v~~~D~G~Y~C~a~N~~G~~~~ 425 (440)
T 3zyj_A 350 DLNVTEGMAAELKCRA-STSLTSVSWITPNGTVMTHGAYKVRIAVLSDG---TLNFTNVTVQDTGMYTCMVSNSVGNTTA 425 (440)
T ss_dssp CEEECTTSCCEECCEE-SSTTSEEEEECTTSCEEESSSCCSSEEECTTC---CEEESSCCSTTCEEEEEEEECSSCEEEE
T ss_pred ceeeccCceEEEEeec-CCCCCceEEEeCCCceeeccCCCceEEEccCC---eEEEccCChhhCEEEEEEEEcCCCcEEE
Confidence 3567889999999999 5789999999944 333322 244444444 6999999999999999999999999998
Q ss_pred EEEEEecCC
Q psy12132 78 FIQLSGIPN 86 (126)
Q Consensus 78 ~~~l~~~~~ 86 (126)
.+.+.+...
T Consensus 426 ~~~~~v~~~ 434 (440)
T 3zyj_A 426 SATLNVTGT 434 (440)
T ss_dssp EEEEEEC--
T ss_pred EEEEEEecc
Confidence 888887543
No 280
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.40 E-value=7.6e-12 Score=79.59 Aligned_cols=106 Identities=14% Similarity=0.177 Sum_probs=70.5
Q ss_pred CCccEEEEEEeee-cCCC-eeEEEECCEEeccCCcE--EEEe--cCC---eEEEEEecCCCCCCEEEEEEEecCCceeEE
Q psy12132 7 PDMRAEIICNVYA-NPPA-KVEWFRDGTAITLGGRI--DMHV--SSE---KHSLLVRHIKDTDFGNYMCQASNNLGSSQQ 77 (126)
Q Consensus 7 ~g~~~~l~C~~~~-~p~~-~~~w~~~~~~~~~~~~~--~~~~--~~~---~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 77 (126)
.|+.+.|.|.+.+ .|.+ .+.|++++..+...... .... ++. ...|.|.++...|.|.|+|.+.|..+....
T Consensus 130 ~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 209 (438)
T 1qgc_4 130 TSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPI 209 (438)
T ss_dssp HTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCE
T ss_pred cCCceEEEEEEccccCCCcEEEEEECCEEcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCce
Confidence 4778999999987 6777 89999999877543111 1111 111 247999999999999999999998776544
Q ss_pred EEEEEecCCCCeec--cCcceeCCCeeEEEEEEccCC
Q psy12132 78 FIQLSGIPNIPVFQ--KSSRRLGPDGYRLVWQVDTYS 112 (126)
Q Consensus 78 ~~~l~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~ 112 (126)
...+.....+.... .......++.+.|.|...+.+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p 246 (438)
T 1qgc_4 210 VKSFNRNECEVMLVESGGGLVKPGGSLKLSCTASGFI 246 (438)
T ss_dssp EEEEETTC-CCEEEEECCEEECTTCCEEEEEEEESSC
T ss_pred ecccccccceeEEecCCceEEecCCcEEEEEEEcccc
Confidence 44444322222211 122345688899999997765
No 281
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.40 E-value=3.2e-12 Score=78.68 Aligned_cols=110 Identities=15% Similarity=0.225 Sum_probs=70.4
Q ss_pred eccCCccEEEEEEeeecCCC--eeEEEECCEEeccCCcEEEEe--cCC---eEEEEEecCCCCCCEEEEEEEecCCcee-
Q psy12132 4 ITAPDMRAEIICNVYANPPA--KVEWFRDGTAITLGGRIDMHV--SSE---KHSLLVRHIKDTDFGNYMCQASNNLGSS- 75 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~p~~--~~~w~~~~~~~~~~~~~~~~~--~~~---~~~l~i~~~~~~d~g~y~C~~~~~~~~~- 75 (126)
.+.+|+.+.|.|.+.+.|++ .+.|++++..+.......... ++. ...|.+.....+|.|.|+|.+.|..+..
T Consensus 128 ~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~ 207 (327)
T 2wng_A 128 RATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGD 207 (327)
T ss_dssp CBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSC
T ss_pred ccCCCCEEEEEEEEeCccCCCcEEEEEECCEEccccccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCC
Confidence 46779999999999988766 899999998875332111110 111 1257777777777899999999986652
Q ss_pred --EEEEEEEe-cCCCCeecc-CcceeCCCeeEEEEEEccCCc
Q psy12132 76 --QQFIQLSG-IPNIPVFQK-SSRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 76 --~~~~~l~~-~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~ 113 (126)
.....+.+ ...+|.+.. ......++.+.|.|...+.+|
T Consensus 208 ~~~~~~~~~~~v~~~P~i~~~~~~~~~G~~v~l~C~~~g~~p 249 (327)
T 2wng_A 208 PLRGTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVRKFYP 249 (327)
T ss_dssp CEEEEEEGGGTBCBCCEEEEEEECCSSTTCCEEEEEEEEEBS
T ss_pred cccceEEeccccCCCCEEEEecCCcCCCCcEEEEEEEccccC
Confidence 33333322 223343332 122346888999999987533
No 282
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.40 E-value=5.4e-12 Score=74.16 Aligned_cols=110 Identities=16% Similarity=0.275 Sum_probs=70.8
Q ss_pred ceeccCCccEEEEEEeeecCC----CeeEEEEC--CEE---ec-------------cCCcEEEEec--CCeEEEEEecCC
Q psy12132 2 HSITAPDMRAEIICNVYANPP----AKVEWFRD--GTA---IT-------------LGGRIDMHVS--SEKHSLLVRHIK 57 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~----~~~~w~~~--~~~---~~-------------~~~~~~~~~~--~~~~~l~i~~~~ 57 (126)
.+.+.+|+++.|.|.+.+.+. +.+.|++. +.. +. ...++.+..+ .....|.|.+++
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 88 (228)
T 3bae_H 9 PGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITSVD 88 (228)
T ss_dssp CSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECSCC
T ss_pred ceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcCCC
Confidence 457889999999999987764 88999874 211 10 1235555432 235689999999
Q ss_pred CCCCEEEEEEEecCCc------e---eEEEEEEEecC---CCCeec-cCc--ceeCCCeeEEEEEEccC
Q psy12132 58 DTDFGNYMCQASNNLG------S---SQQFIQLSGIP---NIPVFQ-KSS--RRLGPDGYRLVWQVDTY 111 (126)
Q Consensus 58 ~~d~g~y~C~~~~~~~------~---~~~~~~l~~~~---~~~~~~-~~~--~~~~~~~~~l~~~~~~~ 111 (126)
..|.|.|.|.+.+..| . ......|.+.. .+|.+. ..+ ....++.+.|+|.+.+.
T Consensus 89 ~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~g~ 157 (228)
T 3bae_H 89 TADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGY 157 (228)
T ss_dssp GGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC-----CCSEEEEEEEEEEE
T ss_pred cccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEecccccccCCCCEEEEEEEccE
Confidence 9999999999987643 1 11223444432 233222 111 12467889999999765
No 283
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.39 E-value=5.1e-12 Score=71.97 Aligned_cols=101 Identities=13% Similarity=0.173 Sum_probs=67.6
Q ss_pred ceeccCCccEEEEEEeee-cCCCeeEEEEC-CEEec------------cC--CcEEEEecCCeEEEEEecCCCCCCEEEE
Q psy12132 2 HSITAPDMRAEIICNVYA-NPPAKVEWFRD-GTAIT------------LG--GRIDMHVSSEKHSLLVRHIKDTDFGNYM 65 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~-~p~~~~~w~~~-~~~~~------------~~--~~~~~~~~~~~~~l~i~~~~~~d~g~y~ 65 (126)
++.+.+|+++.|.|.+.+ .+.+.+.|++. +..+. .. .++.+ ...+.+|.|.+++..|.|.|+
T Consensus 8 ~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l--~~~~~sL~I~~v~~~D~G~Y~ 85 (180)
T 2dru_A 8 NVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDL--DKTNGALRIYNVSKEDRGDYY 85 (180)
T ss_dssp EEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEE--CTTTCCEEECSCCGGGCEEEE
T ss_pred eEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEE--eCCCccEEEcCCCHHHCeEEE
Confidence 467889999999999753 33678999984 32221 11 34433 123347999999999999999
Q ss_pred EEEecCCceeEEEEEEEecCC--CCeeccCcceeCCCeeEEEEEE-cc
Q psy12132 66 CQASNNLGSSQQFIQLSGIPN--IPVFQKSSRRLGPDGYRLVWQV-DT 110 (126)
Q Consensus 66 C~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~-~~ 110 (126)
|.+.+.. .....+.|.|... .|.+.. ....+.|+|.+ .+
T Consensus 86 C~v~~~~-~~~~~~~L~V~~~~~~P~i~~-----~~~~v~L~C~~~~g 127 (180)
T 2dru_A 86 MRMLHET-EDQWKITMEVYEMVSKPMIYW-----ECSNATLTCEVLEG 127 (180)
T ss_dssp EEEESSS-EEEEEEEEEEECCCCCCEEEE-----EGGGTEEEEECSSC
T ss_pred EEEEcCC-eEEEEEEEEEECCCCCCEEEe-----cCCCEEEEEEeCCC
Confidence 9988765 5566666666432 233222 22458999999 55
No 284
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=99.39 E-value=2.4e-11 Score=66.30 Aligned_cols=83 Identities=18% Similarity=0.323 Sum_probs=60.8
Q ss_pred ceeccCCccEEEEEEeeecCC---CeeEEEECCE--Eec---------------cCCcEEEEec---CCeEEEEEecCCC
Q psy12132 2 HSITAPDMRAEIICNVYANPP---AKVEWFRDGT--AIT---------------LGGRIDMHVS---SEKHSLLVRHIKD 58 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~---~~~~w~~~~~--~~~---------------~~~~~~~~~~---~~~~~l~i~~~~~ 58 (126)
.+.+..|+++.|.|.+.+.+. +.+.|++++. .+. ...++.+... .....|.|.+++.
T Consensus 15 ~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~v~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~ 94 (139)
T 1pko_A 15 PIRALVGDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKVALRIQNVRF 94 (139)
T ss_dssp CEEEETTSCEEEEEEEESCCCCTTSEEEEEEC--CCEEEEEETTEECGGGSCSTTTTSEEEECTTGGGTEEEEEESSCCG
T ss_pred CEEEEeCCCEEEeeEccCCCCCCceEEEEEECCCCceEEEEeCCcccccccCcccCCceEEccccccCCeEEEEEccCCH
Confidence 466788999999999975543 6899999763 110 0234444432 2356899999999
Q ss_pred CCCEEEEEEEecCCceeEEEEEEEec
Q psy12132 59 TDFGNYMCQASNNLGSSQQFIQLSGI 84 (126)
Q Consensus 59 ~d~g~y~C~~~~~~~~~~~~~~l~~~ 84 (126)
.|.|.|+|.+.+..+.....+.|.|.
T Consensus 95 ~D~G~Y~C~v~~~~~~~~~~~~L~V~ 120 (139)
T 1pko_A 95 SDEGGYTCFFRDHSYQEEAAVELKVE 120 (139)
T ss_dssp GGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred HHCEEEEEEEEcCCCceEEEEEEEEe
Confidence 99999999999988877777888776
No 285
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.38 E-value=2.1e-12 Score=75.50 Aligned_cols=108 Identities=16% Similarity=0.258 Sum_probs=67.9
Q ss_pred ccCCccEEEEEEeeecC---C-CeeEEEECCEEeccCCcEEEEe--cC---CeEEEEEecCCCCCCEEEEEEEecCCcee
Q psy12132 5 TAPDMRAEIICNVYANP---P-AKVEWFRDGTAITLGGRIDMHV--SS---EKHSLLVRHIKDTDFGNYMCQASNNLGSS 75 (126)
Q Consensus 5 ~~~g~~~~l~C~~~~~p---~-~~~~w~~~~~~~~~~~~~~~~~--~~---~~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 75 (126)
+.+|+++.|.|.+.+.+ . +.+.|++++..+.......... ++ ....|.|.++...|.|.|+|.+.+..+..
T Consensus 23 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~g~Y~C~~~~~~~~~ 102 (218)
T 2rgs_A 23 LMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMSGKEFKCKVNNKDLPS 102 (218)
T ss_dssp HCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHHTTCCEEEEEEETTCSS
T ss_pred hccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcCCCCeEEEEEECCcCCC
Confidence 67899999999998773 3 6899999987654321110000 00 12479999999999999999999876543
Q ss_pred --EEEEEEE-ecCCCCeec-cCc--ceeCCCeeEEEEEEccCC
Q psy12132 76 --QQFIQLS-GIPNIPVFQ-KSS--RRLGPDGYRLVWQVDTYS 112 (126)
Q Consensus 76 --~~~~~l~-~~~~~~~~~-~~~--~~~~~~~~~l~~~~~~~~ 112 (126)
...+.+. ....+|.+. ... ....++.+.|.|.+.+..
T Consensus 103 ~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~ 145 (218)
T 2rgs_A 103 PIERTISKIKGLVRAPQVYILPPPAEQLSRKDVSLTCLVVGFN 145 (218)
T ss_dssp CEEEEECCCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEB
T ss_pred cceEEEeecCCCCCCCEEEEECCChHHhcCCceEEEEEEEeee
Confidence 2222211 112233322 111 112478899999998743
No 286
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.38 E-value=4.5e-11 Score=71.56 Aligned_cols=101 Identities=10% Similarity=0.137 Sum_probs=71.0
Q ss_pred eeccCCccEEEEEEeee-cCCC--eeEEEECCEEeccCCcEEEEecCCeEEEEEecC---CCCCCEE--EEEEEecCCce
Q psy12132 3 SITAPDMRAEIICNVYA-NPPA--KVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHI---KDTDFGN--YMCQASNNLGS 74 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~-~p~~--~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~---~~~d~g~--y~C~~~~~~~~ 74 (126)
..+.+|+++.|.|.+.+ .|.+ .+.|++++..+.. . ....+. .+.+..+ +..|.|. |+|.+.+..+.
T Consensus 13 ~~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~--~--~~~~~~--~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~ 86 (265)
T 2oz4_A 13 RVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP--T--VTYGND--SFSAKASVSVTAEDEGTQRLTCAVILGNQS 86 (265)
T ss_dssp SEEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCC--E--EEECSS--EEEEEEEEEECGGGCEEEEEEEEEEETTEE
T ss_pred ceEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCc--e--EeeCCC--eEEEEeecccccccCCcceEEEEEecCCCC
Confidence 35678999999999998 7766 9999999987653 1 222222 3444444 7778884 99999999888
Q ss_pred eEEEEEEEecCC-CCeec-cCcceeCCCeeEEEEEEc
Q psy12132 75 SQQFIQLSGIPN-IPVFQ-KSSRRLGPDGYRLVWQVD 109 (126)
Q Consensus 75 ~~~~~~l~~~~~-~~~~~-~~~~~~~~~~~~l~~~~~ 109 (126)
......|.+... ++.+. .......++.+.|.|...
T Consensus 87 ~~~~~~l~V~~~p~p~~~~~~~~v~~G~~v~l~C~~~ 123 (265)
T 2oz4_A 87 QETLQTVTIYSFPAPNVILTKPEVSEGTEVTVKCEAH 123 (265)
T ss_dssp EEEEEEEEEECCCCCEEEESCSEEETTCEEEEEEECC
T ss_pred cEEEEEEEEeCCCCceeecCCceecCCCcEEEEEEcc
Confidence 877777776432 23332 233345688999999887
No 287
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.38 E-value=7.4e-12 Score=72.61 Aligned_cols=109 Identities=14% Similarity=0.252 Sum_probs=68.2
Q ss_pred ccCCccEEEEEEeeecC----CCeeEEEECCEEeccCCc-EE-EEecC---CeEEEEEecCCCCCCEEEEEEEecCCcee
Q psy12132 5 TAPDMRAEIICNVYANP----PAKVEWFRDGTAITLGGR-ID-MHVSS---EKHSLLVRHIKDTDFGNYMCQASNNLGSS 75 (126)
Q Consensus 5 ~~~g~~~~l~C~~~~~p----~~~~~w~~~~~~~~~~~~-~~-~~~~~---~~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 75 (126)
+.+|+++.|.|.+.+.+ .+.+.|++++..+..... .. ...++ ....|.|.++...|.|.|+|.+.+..+..
T Consensus 15 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~~~~~ 94 (207)
T 2vol_A 15 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPA 94 (207)
T ss_dssp HSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEEEEECTTCSS
T ss_pred hccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEEEEccCCCC
Confidence 67899999999998874 248999999866532100 00 00011 12368999999999999999999987643
Q ss_pred --EEEEEEE-ecCCCCeec-cCc--ceeCCCeeEEEEEEccCCc
Q psy12132 76 --QQFIQLS-GIPNIPVFQ-KSS--RRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 76 --~~~~~l~-~~~~~~~~~-~~~--~~~~~~~~~l~~~~~~~~~ 113 (126)
...+.+. ....+|.+. ... ....++.+.|.|.+.+..|
T Consensus 95 ~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P 138 (207)
T 2vol_A 95 PIEKTISKTKGRPKAPQVYTLPPPKEQMAKDKVSLTCMITDFFP 138 (207)
T ss_dssp CEEEEECCCCCCCBCCEEEEECCCTGGGSSSEEEEEEEEEEEBS
T ss_pred ceEEEeccCCCCCcCCeEEEeCCCHHHhcCCceEEEEEEeeEEC
Confidence 2333221 112233322 111 1224778999999977543
No 288
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.38 E-value=3.1e-12 Score=78.63 Aligned_cols=112 Identities=12% Similarity=0.173 Sum_probs=71.5
Q ss_pred ceeccCCccEEEEEEeeec----CCCeeEEEECC--EE-------------e--ccCCcEEEE-ecCCeEEEEEecCCCC
Q psy12132 2 HSITAPDMRAEIICNVYAN----PPAKVEWFRDG--TA-------------I--TLGGRIDMH-VSSEKHSLLVRHIKDT 59 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~----p~~~~~w~~~~--~~-------------~--~~~~~~~~~-~~~~~~~l~i~~~~~~ 59 (126)
++.+.+|+++.|.|.+.+. +.+.+.|++++ .. + ....++.+. .......|.|.++...
T Consensus 23 ~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~ 102 (331)
T 3u83_A 23 SMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELE 102 (331)
T ss_dssp EEEEETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSBCCEEECSCCGG
T ss_pred cEEEEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCCceEEEcccCcc
Confidence 3577899999999998765 34479999943 11 1 112344332 1123457999999999
Q ss_pred CCEEEEEE-EecCCceeEEEEEEEecCCCCeec--c--CcceeCC---CeeEEEEE-EccCCc
Q psy12132 60 DFGNYMCQ-ASNNLGSSQQFIQLSGIPNIPVFQ--K--SSRRLGP---DGYRLVWQ-VDTYSA 113 (126)
Q Consensus 60 d~g~y~C~-~~~~~~~~~~~~~l~~~~~~~~~~--~--~~~~~~~---~~~~l~~~-~~~~~~ 113 (126)
|.|.|+|. ..+..+.....+.|.+...|.... . ......+ +.+.|.|. ..+.++
T Consensus 103 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~ 165 (331)
T 3u83_A 103 DEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPP 165 (331)
T ss_dssp GCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSC
T ss_pred cCcEEEEEEEecCCCccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCC
Confidence 99999998 555567677777777654433311 1 1112233 66999998 455443
No 289
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=99.38 E-value=5.3e-12 Score=68.62 Aligned_cols=70 Identities=19% Similarity=0.387 Sum_probs=55.4
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEEC--CE---Ee-ccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCc
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRD--GT---AI-TLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLG 73 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~--~~---~~-~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~ 73 (126)
.+.+.+|+++.|.|.+.+. +.+.|+++ +. .+ ....++.....+....|.|.+++..|+|.|.|.+.+..|
T Consensus 26 ~~~v~~G~~v~L~C~~~~~--~~v~W~r~~~g~~~~~l~~~~~r~~~~~~~~~~~L~I~~~~~~DsG~Y~C~a~n~~g 101 (133)
T 3khq_A 26 FAAKKRSSMVKFHCYTNHS--GALTWFRKRGSQQPQELVSEEGRIVQTQNGSVYTLTIQNIQYEDNGIYFCKQKCDSA 101 (133)
T ss_dssp EEEECTTCCEEEEEEESSS--SCEEEEEECTTSCCEECCCTTTTEEEEEETTEEEEEECSCCGGGCEEEEEEESSCC-
T ss_pred eEEEeCCCeEEEEEEeCCC--CEEEEEEeCCCCCCEEEEEeCCCEEEEcCCCEEEEEECCCChHHCEEEEEEEEeCCC
Confidence 3567889999999999876 88999986 32 12 234677776666677899999999999999999998754
No 290
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.38 E-value=6.1e-12 Score=76.04 Aligned_cols=103 Identities=12% Similarity=0.155 Sum_probs=67.6
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCC-eEEEEEecCCCCCCEEEEEEEecCCce---eEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSE-KHSLLVRHIKDTDFGNYMCQASNNLGS---SQQ 77 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~-~~~l~i~~~~~~d~g~y~C~~~~~~~~---~~~ 77 (126)
++.+.+|+++.|.|.+.+. +.|++++..+. .+......+. ...|.|.++...|.|.|+|.+.|..|. ...
T Consensus 9 ~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~--~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~ 82 (289)
T 3mjg_X 9 ELVLNVSSTFVLTCSGSAP----VVWERMSQEPP--QEMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRGLETDERK 82 (289)
T ss_dssp EEECCTTCCEEEEEEESSC----CEEEBTTBCCS--EEEEECTTSCEEEEEEECSCCGGGCEEEEEECCC------CCCE
T ss_pred eEEEeCCCcEEEEEeccce----EEEECCCCCcc--cceeccCCCceeEEEEEccCChhhCEEEEEEEcccCCCCcCcEE
Confidence 3567899999999998764 99999987653 1222222221 358999999999999999999987765 345
Q ss_pred EEEEEecC-CCCeeccC-----cceeCCCeeEEEEEEcc
Q psy12132 78 FIQLSGIP-NIPVFQKS-----SRRLGPDGYRLVWQVDT 110 (126)
Q Consensus 78 ~~~l~~~~-~~~~~~~~-----~~~~~~~~~~l~~~~~~ 110 (126)
.+.+.+.. ..+..... .....++.+.|.|....
T Consensus 83 ~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~ 121 (289)
T 3mjg_X 83 RLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVTD 121 (289)
T ss_dssp EEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBSC
T ss_pred eEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcCC
Confidence 56666542 22222111 22456788999998873
No 291
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.37 E-value=4.5e-12 Score=77.94 Aligned_cols=107 Identities=12% Similarity=0.128 Sum_probs=72.7
Q ss_pred eeccCC---ccEEEEEE-eeecCCCeeEEEECC--EEec-----cCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecC
Q psy12132 3 SITAPD---MRAEIICN-VYANPPAKVEWFRDG--TAIT-----LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNN 71 (126)
Q Consensus 3 ~~~~~g---~~~~l~C~-~~~~p~~~~~w~~~~--~~~~-----~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~ 71 (126)
+.+.+| +.+.|.|. ..+.|.+.+.|++++ .... ....+.. ...|.|..+...|.|.|+|.+.|.
T Consensus 142 ~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~-----~~~L~i~~~~~~d~G~Y~C~a~n~ 216 (331)
T 3u83_A 142 LRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEIRNPNGTVTV-----ISRYRLVPSREAHQQSLACIVNYH 216 (331)
T ss_dssp EEECTTCCCCEEEEEEEEEEEBSCCEEEEEESSCCEEEEEEEECTTSCEEE-----EEEEEECCCGGGTTCEEEEEEEET
T ss_pred eeecCCCccceEEEEEEecCCcCCceEEEEcCCCCccccceeECCCCcEEE-----EEEEEEEeccccCCCEEEEEEecC
Confidence 345566 77999998 788999999999853 2211 1111111 136888889999999999999999
Q ss_pred CceeEEEEEEEecCCCCeeccC---cceeCCCeeEEEEEEccCCcc
Q psy12132 72 LGSSQQFIQLSGIPNIPVFQKS---SRRLGPDGYRLVWQVDTYSAI 114 (126)
Q Consensus 72 ~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~ 114 (126)
.+.....+.|.+...|...... .....++.+.|+|...+.++.
T Consensus 217 ~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p 262 (331)
T 3u83_A 217 MDRFKESLTLNVQYEPEVTIEGFDGNWYLQRMDVKLTCKADANPPA 262 (331)
T ss_dssp TEEEEEEEECCEEEEEEEEEECCCSCCBTTCCCEEEEEEEEEESCC
T ss_pred CCcceeeEEEEEecCCeEEEecCCCceEeCCCeEEEEEeCcCCCCC
Confidence 8887777777664333222221 113457889999999777554
No 292
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.37 E-value=1.2e-12 Score=75.64 Aligned_cols=77 Identities=17% Similarity=0.283 Sum_probs=60.0
Q ss_pred eccCCccEEEEEEe-eecCCCeeEEEECC--EEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEE
Q psy12132 4 ITAPDMRAEIICNV-YANPPAKVEWFRDG--TAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQ 80 (126)
Q Consensus 4 ~~~~g~~~~l~C~~-~~~p~~~~~w~~~~--~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 80 (126)
.+..|+.+.|.|.+ .+.|.+.+.|++++ ..+...... ......|.|.++...|.|.|+|.+.|..|...+.+.
T Consensus 132 ~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~~~~~~~~~~----~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~ 207 (214)
T 3jz7_A 132 SEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMPTPWLA----EMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLR 207 (214)
T ss_dssp CCBTTCCEEEEEECSBCCSSCEEEEEECSTTCCCCGGGGG----GTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred ceecCCcEEEEecCCCCCCCCEEEEEECCCCCccCcccee----ccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEE
Confidence 35679999999999 88999999999953 333221111 111238999999999999999999999999988888
Q ss_pred EEec
Q psy12132 81 LSGI 84 (126)
Q Consensus 81 l~~~ 84 (126)
|.|.
T Consensus 208 l~V~ 211 (214)
T 3jz7_A 208 LDVV 211 (214)
T ss_dssp ECCB
T ss_pred EEEe
Confidence 8876
No 293
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=99.37 E-value=8.2e-12 Score=66.40 Aligned_cols=81 Identities=15% Similarity=0.254 Sum_probs=58.2
Q ss_pred ceeccCCccEEEEEEeeec--CCCeeEEEECCEEecc-------------CCcEEEEecCCeEEEEEecCCCCCCEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYAN--PPAKVEWFRDGTAITL-------------GGRIDMHVSSEKHSLLVRHIKDTDFGNYMC 66 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~--p~~~~~w~~~~~~~~~-------------~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 66 (126)
++.+..|+++.|.|...+. +...+.|++++..+.. ..++.+.. +..|.|.+++..|.|.|+|
T Consensus 12 ~v~~~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~i~~~~~~~~~~~~~~~~~R~~~~~---~~sL~I~~v~~~D~G~Y~C 88 (117)
T 3q0h_A 12 NISAEKGGSIILQCHLSSTTAQVTQVNWEQQDQLLAICNADLGWHISPSFKDRVAPGP---GLGLTLQSLTVNDTGEYFC 88 (117)
T ss_dssp CEEEETTCCEEECEEEESCCCEEEEEEEEETTEEEEEEETTTEEECCGGGTTTEEECS---TTCEEECSCCGGGCEEEEE
T ss_pred CEEEecCCCEEEEEEecCCCCCEEEEEEEeCCEEEEEEECCCCceeCccccCcEEeCC---ceEEEEeeCChhhCEEEEE
Confidence 4678899999999999762 2346899997654321 23444322 3479999999999999999
Q ss_pred EEec-CCceeEEEEEEEecC
Q psy12132 67 QASN-NLGSSQQFIQLSGIP 85 (126)
Q Consensus 67 ~~~~-~~~~~~~~~~l~~~~ 85 (126)
.+.+ ..|.....+.|.|..
T Consensus 89 ~v~~~~~g~~~~~~~L~V~~ 108 (117)
T 3q0h_A 89 IYHTYPDGTYTGRIFLEVLE 108 (117)
T ss_dssp EEEEETTCCEEEEEEEEEEC
T ss_pred EEEECCCCCeEEEEEEEEEc
Confidence 9754 456777777777653
No 294
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=99.37 E-value=1.1e-11 Score=76.50 Aligned_cols=114 Identities=19% Similarity=0.220 Sum_probs=72.1
Q ss_pred eccCCccEEEEEEeeecC-CCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEEE
Q psy12132 4 ITAPDMRAEIICNVYANP-PAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLS 82 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~p-~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~ 82 (126)
.+..|+++.|.|.+.+.+ .+.+.|++++..+........... ..|.|.++.+.|.|.|+|.. .|...+...|.
T Consensus 17 ~~~~G~~v~l~C~~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~---~~L~i~~v~~~d~G~Y~C~~---~g~~~~~~~L~ 90 (325)
T 1n26_A 17 TSLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHPSRWAGMG---RRLLLRSVQLHDSGNYSCYR---AGRPAGTVHLL 90 (325)
T ss_dssp EECTTCCEEEECTTSCTTCCSEEEEEEECSSSSCCCEEEEEES---SEEEECSCCGGGCEEEEEES---SSSCSCEEEEE
T ss_pred ECCCCCcEEEEeCCCCCCCCceEEEEECCccCCcccccccccc---ceEEecccchhhCeEeEEEe---CCEEeeeEEEE
Confidence 346899999999988654 679999987754422111111222 37999999999999999993 45555555555
Q ss_pred ec--CCCCeeccCcceeCCCeeEEEEEEccC-CcceeEEEEEEEe
Q psy12132 83 GI--PNIPVFQKSSRRLGPDGYRLVWQVDTY-SAIIQYLLKFRER 124 (126)
Q Consensus 83 ~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~r~~ 124 (126)
+. +..|.+.+... .....+.++|.+... .....|.+.|++.
T Consensus 91 V~~pP~~P~l~c~~~-~~~~~~~c~W~~~~~~~~~~~y~l~~~~~ 134 (325)
T 1n26_A 91 VDVPPEEPQLSCFRK-SPLSNVVCEWGPRSTPSLTTKAVLLVRKF 134 (325)
T ss_dssp ECCCCCCCCCEEEBS-STTSCEEEEECCSSCCCTTCEEEEEEEEE
T ss_pred eccCCCCCceeEEee-cCCCcEEEEECCCCCCCCCceEEEEEEEc
Confidence 43 33333222111 123467888876322 2346788888864
No 295
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.37 E-value=2e-12 Score=74.70 Aligned_cols=81 Identities=23% Similarity=0.547 Sum_probs=59.6
Q ss_pred eccCCccEEEEEE-eeecCCCeeEEEECCE-EeccCCcE-------EEEecCCeEEEEEecCCCCCCEEEEEEEecCCce
Q psy12132 4 ITAPDMRAEIICN-VYANPPAKVEWFRDGT-AITLGGRI-------DMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGS 74 (126)
Q Consensus 4 ~~~~g~~~~l~C~-~~~~p~~~~~w~~~~~-~~~~~~~~-------~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 74 (126)
.+..|+.+.|.|. +.+.|.+.+.|++++. .+...... ..........|.|.++...|.|.|+|.+.|..|.
T Consensus 115 ~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 194 (212)
T 1f97_A 115 SVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGT 194 (212)
T ss_dssp EEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSCSSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSC
T ss_pred ccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccccccCceeEecCCCceEEEEecChhhCcEEEEEEccccCC
Confidence 4678999999999 7889999999999998 66543221 1112223347999999999999999999999887
Q ss_pred e--EEEEEEEec
Q psy12132 75 S--QQFIQLSGI 84 (126)
Q Consensus 75 ~--~~~~~l~~~ 84 (126)
. ...+.|.+.
T Consensus 195 ~~~s~~~~l~V~ 206 (212)
T 1f97_A 195 AMRSEAAHMDAV 206 (212)
T ss_dssp CEECCCEEEEEE
T ss_pred ccccceEEEEEE
Confidence 7 445555543
No 296
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.37 E-value=5.3e-11 Score=69.51 Aligned_cols=112 Identities=14% Similarity=0.245 Sum_probs=70.9
Q ss_pred ceeccCCccEEEEEEeeecC--CCeeEEEECC--EE---e---c-------------cCCcEEEEec--CCeEEEEEecC
Q psy12132 2 HSITAPDMRAEIICNVYANP--PAKVEWFRDG--TA---I---T-------------LGGRIDMHVS--SEKHSLLVRHI 56 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p--~~~~~w~~~~--~~---~---~-------------~~~~~~~~~~--~~~~~l~i~~~ 56 (126)
.+.+.+|+++.|.|.+.+.+ .+.+.|++.. .. + . ...++.+..+ .....|.|.++
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 88 (221)
T 3m8o_H 9 GGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMNSL 88 (221)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEECSC
T ss_pred CEEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEECCC
Confidence 45688999999999998643 5789998732 11 1 0 1245555433 34568999999
Q ss_pred CCCCCEEEEEEEecCC--ceeEEEEEEEec---CCCCeec-c-CcceeCCCeeEEEEEEccCCc
Q psy12132 57 KDTDFGNYMCQASNNL--GSSQQFIQLSGI---PNIPVFQ-K-SSRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 57 ~~~d~g~y~C~~~~~~--~~~~~~~~l~~~---~~~~~~~-~-~~~~~~~~~~~l~~~~~~~~~ 113 (126)
+..|.|.|.|.+.+.. ........+.+. ..+|.+. . ......++.+.|.|.+.+..|
T Consensus 89 ~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~g~~v~L~C~~~~~~P 152 (221)
T 3m8o_H 89 KSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSLCSTQPDGNVVIACLVQGFFP 152 (221)
T ss_dssp CGGGCEEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEECCSCCCTTEEEEEEEEEEEBS
T ss_pred CHHHCEEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEecCcccccCCCEEEEEEEEeeEC
Confidence 9999999999998753 112222334432 2233322 1 111146788999999977433
No 297
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.37 E-value=4e-11 Score=71.31 Aligned_cols=108 Identities=10% Similarity=0.154 Sum_probs=70.4
Q ss_pred eccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCce--eEEEEEE
Q psy12132 4 ITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGS--SQQFIQL 81 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~--~~~~~~l 81 (126)
.+.+|++++|.|.+.+ +.+.+.|+|++..+...... .........|.|.++...|.|.|+|.+.+..+. .+..+.|
T Consensus 17 ~v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~~-~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~s~~S~~~~L 94 (242)
T 1p6f_A 17 MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPK-PPERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDL 94 (242)
T ss_dssp EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCS-SCTTCCEEEEEECSCCGGGCEEEEEEEEETTEECCCCCCEEE
T ss_pred ccCCCCcEEEEEeeCC-CCcEEEEEECCCcccccccc-ccCCcceeEEEecCCCcccCeEEEEEEecCCccccCCcceEE
Confidence 4678999999999864 45689999998765311000 001123458999999999999999998775332 2334444
Q ss_pred Eec--CCCCeeccC--cceeCCCeeEEEEEEccCCc
Q psy12132 82 SGI--PNIPVFQKS--SRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 82 ~~~--~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~ 113 (126)
.+. ..+|.+... .....++.+.|.|...+..+
T Consensus 95 ~V~~~~~~P~i~~~p~~~v~~G~~vtL~C~~~~~~~ 130 (242)
T 1p6f_A 95 VVTEMYDTPTLSVHPGPEVISGEKVTFYCRLDTATS 130 (242)
T ss_dssp EEECCSCCCEEEEESCSEEETTCEEEEEEECTTSCS
T ss_pred EeecccCCCceEccCCCccCCCCcEEEEEecCCCCC
Confidence 443 233433321 23457899999999865543
No 298
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.36 E-value=1.3e-11 Score=72.57 Aligned_cols=111 Identities=13% Similarity=0.179 Sum_probs=69.2
Q ss_pred ceeccCCccEEEEEEeeecC--CCeeEEEECC--EE---e---c-----------cCCcEEEEec--CCeEEEEEecCCC
Q psy12132 2 HSITAPDMRAEIICNVYANP--PAKVEWFRDG--TA---I---T-----------LGGRIDMHVS--SEKHSLLVRHIKD 58 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p--~~~~~w~~~~--~~---~---~-----------~~~~~~~~~~--~~~~~l~i~~~~~ 58 (126)
.+.+.+|+++.|.|.+.+.+ .+.+.|+++. .. + . ...++.+..+ .....|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (227)
T 1mju_H 9 AELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSSLTS 88 (227)
T ss_dssp EEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECCCCc
Confidence 45688999999999998776 6789999853 11 1 0 1246655432 3457899999999
Q ss_pred CCCEEEEEEEecCCce-eEEEEEEEecC---CCCeec-cCc--ceeCCCeeEEEEEEccCC
Q psy12132 59 TDFGNYMCQASNNLGS-SQQFIQLSGIP---NIPVFQ-KSS--RRLGPDGYRLVWQVDTYS 112 (126)
Q Consensus 59 ~d~g~y~C~~~~~~~~-~~~~~~l~~~~---~~~~~~-~~~--~~~~~~~~~l~~~~~~~~ 112 (126)
.|.|.|.|.+.+..+. ......|.|.. .+|... ..+ ....++.+.|+|.+.+..
T Consensus 89 ~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~ 149 (227)
T 1mju_H 89 DDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTSGSSVTLGCLVKGYF 149 (227)
T ss_dssp GGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECCCC------CEEEEEEEEEEB
T ss_pred ccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecCCccccCCCcEEEEEEeecEe
Confidence 9999999999875321 11223444432 223222 111 123577899999997653
No 299
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.36 E-value=7.2e-12 Score=73.12 Aligned_cols=73 Identities=16% Similarity=0.325 Sum_probs=59.7
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCce-eEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGS-SQQFIQL 81 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~-~~~~~~l 81 (126)
..+..|+.+.|.|.+.+.|.+.+.|++++..+..... ..|.|.++...|.|.|+|.+.|..|. ....+.|
T Consensus 128 ~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~~~---------~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l 198 (218)
T 3k0w_A 128 QKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETK---------KLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEI 198 (218)
T ss_dssp EEECTTCCEEEECEEEBSSCCEEEEEETTEECTTCCS---------SEEEESSCCGGGCEEEEEEEECSSCEEECCCEEE
T ss_pred eeecCCCcEEEEEEecccCCCeEEEEECCEECCCCCC---------CEEEEeecChhcCEEEEEEEEcCCCCceeeeEEE
Confidence 4577899999999999999999999999987764322 27999999999999999999998776 4455555
Q ss_pred Eec
Q psy12132 82 SGI 84 (126)
Q Consensus 82 ~~~ 84 (126)
.+.
T Consensus 199 ~V~ 201 (218)
T 3k0w_A 199 IID 201 (218)
T ss_dssp EEC
T ss_pred EEe
Confidence 553
No 300
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.36 E-value=5.4e-12 Score=80.61 Aligned_cols=110 Identities=11% Similarity=0.041 Sum_probs=76.4
Q ss_pred ceeccCCccEEEEEEeeecCCCee-----EEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKV-----EWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQ 76 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~-----~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 76 (126)
++.+..|+++.|.|.+.+ |.|.+ .|++++..+.. .+ ...|.|.++.. |.| |+|.+.+..+...
T Consensus 8 ~~~v~~G~~v~L~C~~~g-p~p~~~~~~~~w~k~~~~~~~-~~--------~~~l~i~~v~~-d~g-Y~C~a~~~~~~~~ 75 (450)
T 1z7z_I 8 KVILPRGGSVLVTCSTSC-DQPMLLGIETPLPKKELLLPG-NN--------RKVYELSNVQE-DSQ-PMCYSNCPDGQST 75 (450)
T ss_dssp EEEEETTEEEEEEEECCS-SCCCEEEECSSSCEEECCSST-TT--------EEEEEEEEECS-CBC-CEEEEEETTEEEE
T ss_pred ceEEecCCcEEEEEEccC-CCcccccccceeeecceEecC-CC--------ceEEEEEeccc-CCe-eEEEEeCCCCcce
Confidence 456788999999999998 88888 89887653321 11 22688888877 999 9999987766666
Q ss_pred EEEEEEecCCCCeeccC---cceeCCCeeEEEEEEccCCcceeEEEEEEE
Q psy12132 77 QFIQLSGIPNIPVFQKS---SRRLGPDGYRLVWQVDTYSAIIQYLLKFRE 123 (126)
Q Consensus 77 ~~~~l~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~r~ 123 (126)
..+.|.+...|...... .....++.+.|.|...+.++...+.+.|.+
T Consensus 76 ~~~~l~V~~~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k 125 (450)
T 1z7z_I 76 AKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLR 125 (450)
T ss_dssp EECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEE
T ss_pred eEEEEEEEeCCCcceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEee
Confidence 66677665444443222 234578899999999887655333344443
No 301
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.36 E-value=1.1e-11 Score=74.91 Aligned_cols=112 Identities=13% Similarity=0.129 Sum_probs=71.7
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECC--E---Eec--------------cCCcEEEEec-CCeEEEEEecCCCCCC
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDG--T---AIT--------------LGGRIDMHVS-SEKHSLLVRHIKDTDF 61 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~--~---~~~--------------~~~~~~~~~~-~~~~~l~i~~~~~~d~ 61 (126)
++.+.+|+++.|.|.+.+.+.+.+.|+++. . .+. ...++.+..+ .....|.|.+++..|.
T Consensus 33 ~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~ 112 (279)
T 2wbj_D 33 WVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDS 112 (279)
T ss_dssp EEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEEESSCCGGGC
T ss_pred eEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEEEccCCccCC
Confidence 356888999999999987788899999853 1 110 1245555442 3456899999999999
Q ss_pred EEEEEEEecCCc------eeEEEEEEEecC-----CCCeecc-Ccc---eeCCCeeEEEEEEccCCc
Q psy12132 62 GNYMCQASNNLG------SSQQFIQLSGIP-----NIPVFQK-SSR---RLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 62 g~y~C~~~~~~~------~~~~~~~l~~~~-----~~~~~~~-~~~---~~~~~~~~l~~~~~~~~~ 113 (126)
|.|.|.+.+..+ .......+.|.. .+|.+.. .+. ...++.+.|+|.+.+..|
T Consensus 113 G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P 179 (279)
T 2wbj_D 113 SFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYP 179 (279)
T ss_dssp EEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBS
T ss_pred EEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEcC
Confidence 999999988321 111122344332 2333322 111 113568899999977644
No 302
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.36 E-value=3.7e-11 Score=69.99 Aligned_cols=110 Identities=16% Similarity=0.289 Sum_probs=70.5
Q ss_pred ceeccCCccEEEEEEeeecC--CCeeEEEECC--EE---ec-------------cCCcEEEEec--CCeEEEEEecCCCC
Q psy12132 2 HSITAPDMRAEIICNVYANP--PAKVEWFRDG--TA---IT-------------LGGRIDMHVS--SEKHSLLVRHIKDT 59 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p--~~~~~w~~~~--~~---~~-------------~~~~~~~~~~--~~~~~l~i~~~~~~ 59 (126)
.+.+.+|+++.|.|.+.+.+ .+.+.|+++. .. +. ...++.+..+ .....|.|.+++..
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 88 (215)
T 1c5d_H 9 PGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQTE 88 (215)
T ss_dssp CCEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCCGG
T ss_pred CeeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCCcc
Confidence 45688999999999998764 4789999852 11 10 1245555432 23568999999999
Q ss_pred CCEEEEEEEecCCce---eEEEEEEEecC---CCCe-eccC--cceeCCCeeEEEEEEccC
Q psy12132 60 DFGNYMCQASNNLGS---SQQFIQLSGIP---NIPV-FQKS--SRRLGPDGYRLVWQVDTY 111 (126)
Q Consensus 60 d~g~y~C~~~~~~~~---~~~~~~l~~~~---~~~~-~~~~--~~~~~~~~~~l~~~~~~~ 111 (126)
|.|.|.|.+.+..+. ......|.+.. .+|. .... .....++.+.|+|.+.+.
T Consensus 89 D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~ 149 (215)
T 1c5d_H 89 DTAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPGCGDTTSSTVTLGCLVKGY 149 (215)
T ss_dssp GCEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECCCSSCCCCSSEEEEEEEEEE
T ss_pred cCEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEeccCChhhccCCcEEEEEEEeee
Confidence 999999999875321 11223444432 2232 2211 112457789999999776
No 303
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.35 E-value=2.4e-11 Score=72.96 Aligned_cols=110 Identities=14% Similarity=0.204 Sum_probs=70.8
Q ss_pred ceeccCCccEEEEEEeeecC--CCeeEEEECC--EE---ec--------------cCCcEEEEec--CCeEEEEEecCCC
Q psy12132 2 HSITAPDMRAEIICNVYANP--PAKVEWFRDG--TA---IT--------------LGGRIDMHVS--SEKHSLLVRHIKD 58 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p--~~~~~w~~~~--~~---~~--------------~~~~~~~~~~--~~~~~l~i~~~~~ 58 (126)
.+.+.+|+++.|.|.+.+.+ .+.+.|+++. .. +. ...++.+..+ .....|.|.+++.
T Consensus 15 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 94 (261)
T 2xqy_G 15 AELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSSLTS 94 (261)
T ss_dssp EEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCG
T ss_pred CEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcCCCc
Confidence 35688999999999998776 5789999852 11 10 1246655443 2456899999999
Q ss_pred CCCEEEEEEEecCCc---eeEEEEEEEecC---CCCeec-cCc--ceeCCCeeEEEEEEccC
Q psy12132 59 TDFGNYMCQASNNLG---SSQQFIQLSGIP---NIPVFQ-KSS--RRLGPDGYRLVWQVDTY 111 (126)
Q Consensus 59 ~d~g~y~C~~~~~~~---~~~~~~~l~~~~---~~~~~~-~~~--~~~~~~~~~l~~~~~~~ 111 (126)
.|.|.|.|.+.+..+ .......|.|.. .+|... ..+ ....++.+.|.|.+.+.
T Consensus 95 ~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~v~~g~~v~L~C~~~g~ 156 (261)
T 2xqy_G 95 EDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGY 156 (261)
T ss_dssp GGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCCC--CCSEEEEEEEEEEE
T ss_pred ccCeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCCCccccCCCcEEEEEEEEeE
Confidence 999999999998532 111223444432 223222 111 12357789999999765
No 304
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.35 E-value=1.5e-12 Score=80.17 Aligned_cols=86 Identities=22% Similarity=0.463 Sum_probs=65.0
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEE----CCEEeccCCc--EEEEe-------cCCeEEEEEecCCCCCCEEEEEEEe
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFR----DGTAITLGGR--IDMHV-------SSEKHSLLVRHIKDTDFGNYMCQAS 69 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~----~~~~~~~~~~--~~~~~-------~~~~~~l~i~~~~~~d~g~y~C~~~ 69 (126)
..+..|+++.|.|.+.+.|.|.+.|++ ++..+..... +.... ......|.|.++...|.|.|+|.+.
T Consensus 232 ~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 311 (334)
T 1ry7_B 232 QTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAG 311 (334)
T ss_dssp EEEESSCCEEECCCCBCSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEE
T ss_pred eEEeCCCCEEEEEEEecCCCCeEEEEECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEEe
Confidence 456779999999999999999999999 5555543221 11111 1112379999999999999999999
Q ss_pred cCCceeEEEEEEEecCCCC
Q psy12132 70 NNLGSSQQFIQLSGIPNIP 88 (126)
Q Consensus 70 ~~~~~~~~~~~l~~~~~~~ 88 (126)
|..|.....+.|.+...++
T Consensus 312 N~~G~~~~~~~l~V~~~~~ 330 (334)
T 1ry7_B 312 NSIGFSHHSAWLVVLPAEE 330 (334)
T ss_dssp ESSCCEEEEEEEEEECSCC
T ss_pred CCCCeEEEEEEEEEEECCC
Confidence 9999999888888765544
No 305
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.35 E-value=4e-11 Score=73.37 Aligned_cols=110 Identities=15% Similarity=0.105 Sum_probs=70.0
Q ss_pred ceeccCCccEEEEEEeeecCCC-----eeEEEECCEEe-------------ccCCcEEEEec-----CCeEEEEEecCCC
Q psy12132 2 HSITAPDMRAEIICNVYANPPA-----KVEWFRDGTAI-------------TLGGRIDMHVS-----SEKHSLLVRHIKD 58 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~-----~~~w~~~~~~~-------------~~~~~~~~~~~-----~~~~~l~i~~~~~ 58 (126)
++.+..|+++.|.|.+.+.+.+ .+.|+|++... ....++.+... ..+.+|.|.++..
T Consensus 9 ~v~~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~ 88 (313)
T 4fqp_A 9 QVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRV 88 (313)
T ss_dssp EECCBTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEEECSCCG
T ss_pred EEEEecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEEECcCCh
Confidence 4567889999999999876655 38999976421 11223332111 1235799999999
Q ss_pred CCCEEEEEEEe-cCCceeEEEEEEEecCCCCeec--cCcceeCCCeeEEEEEEccC
Q psy12132 59 TDFGNYMCQAS-NNLGSSQQFIQLSGIPNIPVFQ--KSSRRLGPDGYRLVWQVDTY 111 (126)
Q Consensus 59 ~d~g~y~C~~~-~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~ 111 (126)
.|.|.|+|.+. +..+.....+.|.+...|.... .......+....+.|...+.
T Consensus 89 ~D~G~Y~C~v~~~~~~~~~~~~~l~v~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~ 144 (313)
T 4fqp_A 89 EDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGG 144 (313)
T ss_dssp GGCEEEEEEEECSSSCEEEEEEEECCBBCCEEEEEECCBCCCSSCEEEEEEEEEEE
T ss_pred hhCEEEEEEEeeccCcceeeeeeeeeccCCcceecccceEeecCceEEEEEEccCc
Confidence 99999999876 4455666666666543333222 12222345567788877544
No 306
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.35 E-value=5.3e-12 Score=73.01 Aligned_cols=81 Identities=12% Similarity=0.072 Sum_probs=59.7
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEec-CCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVS-SEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
..+..++.+.+.|.+.+.|.|.+.|++++..+........... ...+.|.|..+...|.|.|+|.+.|..|.....+.+
T Consensus 128 ~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~ 207 (218)
T 4frw_A 128 LEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTSSRSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITH 207 (218)
T ss_dssp EETTCCSEEEEEEEEEEBSCCEEEEEESSCCEEEEEEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEE
T ss_pred eeeeeccccceeeeccCCcCceEEEEECCcccccCceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEE
Confidence 4556788999999999999999999998866543322211100 012479999999999999999999998877665555
Q ss_pred Ee
Q psy12132 82 SG 83 (126)
Q Consensus 82 ~~ 83 (126)
.+
T Consensus 208 ~v 209 (218)
T 4frw_A 208 IL 209 (218)
T ss_dssp EC
T ss_pred EE
Confidence 43
No 307
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.34 E-value=1.6e-12 Score=75.88 Aligned_cols=111 Identities=16% Similarity=0.227 Sum_probs=69.8
Q ss_pred ceeccCCccEEEEEEeeecCC-----CeeEEEECCEEe-------------ccCCcEEEEec---CCeEEEEEecCCCCC
Q psy12132 2 HSITAPDMRAEIICNVYANPP-----AKVEWFRDGTAI-------------TLGGRIDMHVS---SEKHSLLVRHIKDTD 60 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~-----~~~~w~~~~~~~-------------~~~~~~~~~~~---~~~~~l~i~~~~~~d 60 (126)
++.+.+|+++.|.|.+.+.+. +.+.|++++... ....+..+... .+...|.|.++...|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D 83 (222)
T 4i0k_A 4 PVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTD 83 (222)
T ss_dssp CCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGG
T ss_pred CEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCccccc
Confidence 567889999999999987654 689999976321 01123322210 114579999999999
Q ss_pred CEEEEEEEecCCceeEEEEEEEec--CCCCeeccCc--ceeCCCeeEEEEEE-ccCCc
Q psy12132 61 FGNYMCQASNNLGSSQQFIQLSGI--PNIPVFQKSS--RRLGPDGYRLVWQV-DTYSA 113 (126)
Q Consensus 61 ~g~y~C~~~~~~~~~~~~~~l~~~--~~~~~~~~~~--~~~~~~~~~l~~~~-~~~~~ 113 (126)
.|.|+|.+.+. +.....+.|.+. +..|.+.... ....++.+.|.|.+ .+.++
T Consensus 84 ~G~Y~C~~~~~-~~~~~~~~l~V~~~~~~p~i~~~~~~~v~~G~~~~l~C~~~~g~P~ 140 (222)
T 4i0k_A 84 EGSYTCFVSIQ-DFDSAAVSLQVAAPYSKPSMTLEPNKDLRPGNMVTITCSSYQGYPE 140 (222)
T ss_dssp CSCEEEEEEEC-CCCCCCCCCCCCBCCCCCEEECCC-----CCSEEEEEEEEEEEBSC
T ss_pred CEEEEEEEEeC-CCceEEEEEEEEcCCCCCcEEeCCCceecCCceEEEEEecccccCC
Confidence 99999999875 233344444433 2333333222 22357889999999 55443
No 308
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.34 E-value=4.3e-11 Score=69.49 Aligned_cols=69 Identities=22% Similarity=0.411 Sum_probs=51.9
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECC-----EEec-------cCCcEEEEec---CCeEEEEEecCCCCCCEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDG-----TAIT-------LGGRIDMHVS---SEKHSLLVRHIKDTDFGNYMC 66 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~-----~~~~-------~~~~~~~~~~---~~~~~l~i~~~~~~d~g~y~C 66 (126)
.+.+.+|+++.|.|.+.+.+ +.+.|++.. ..+. ...++....+ .....|.|.+++..|.|.|.|
T Consensus 10 ~v~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 88 (207)
T 1ypz_E 10 ALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLEDSGTYFC 88 (207)
T ss_dssp EEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGGCEEEEE
T ss_pred eEEEccCCcEEEEEEEeCCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHHCEEEEE
Confidence 35788999999999997543 589999842 1121 2356666544 445789999999999999999
Q ss_pred EEecC
Q psy12132 67 QASNN 71 (126)
Q Consensus 67 ~~~~~ 71 (126)
.+.+.
T Consensus 89 ~~~~~ 93 (207)
T 1ypz_E 89 AADTW 93 (207)
T ss_dssp EEECB
T ss_pred EEecC
Confidence 99875
No 309
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=99.34 E-value=9.7e-12 Score=65.50 Aligned_cols=79 Identities=15% Similarity=0.145 Sum_probs=57.0
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEe----------------c---cCCcEEEEecCCeEEEEEecCCCCCCEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAI----------------T---LGGRIDMHVSSEKHSLLVRHIKDTDFGN 63 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~----------------~---~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 63 (126)
..+.+|+++.|.|.......+.+.|+|..... . ..+|..+..++ +|.|.++...|.|.
T Consensus 10 ~~~~~G~~v~L~~~~~p~~~~~i~W~kg~~~~~~~~I~~y~~~~~~~~~~~~~~gR~~~~~ng---SL~I~nvt~~D~G~ 86 (111)
T 2qsq_A 10 FNVAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNA---SLLIQNIIQNDAGF 86 (111)
T ss_dssp SEEETTSCEEEEEESCCSSEEEEEEEESSSCCGGGEEEEEETTTTEEEECTTCCSCEEECTTS---CEEECSCCGGGCEE
T ss_pred ceeccCCCEEEEEeCCCCCceEEEEEeCCCCCCCcEEEEEECCCcceecCcccCCcEEEecCC---cEEEccCcccCCeE
Confidence 46788999999998643334469999865211 0 13466665555 89999999999999
Q ss_pred EEEEEecCCc-eeEEEEEEEec
Q psy12132 64 YMCQASNNLG-SSQQFIQLSGI 84 (126)
Q Consensus 64 y~C~~~~~~~-~~~~~~~l~~~ 84 (126)
|+|.+.+..+ ...+.+.|.|.
T Consensus 87 Ytc~v~~~~~~~~~~~~~L~V~ 108 (111)
T 2qsq_A 87 YTLHVIKSDLVNEEATGQFRVY 108 (111)
T ss_dssp EEEEEEETTSCCEEEEEEEEEE
T ss_pred EEEEEEeCCCcEEEEEEEEEEe
Confidence 9999998755 45666666654
No 310
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.34 E-value=1.7e-10 Score=68.06 Aligned_cols=112 Identities=17% Similarity=0.266 Sum_probs=68.9
Q ss_pred ceeccCCccEEEEEEeeecC--CCeeEEEECC--E---Eec-------------cCCcEEEEec--CCeEEEEEecCCCC
Q psy12132 2 HSITAPDMRAEIICNVYANP--PAKVEWFRDG--T---AIT-------------LGGRIDMHVS--SEKHSLLVRHIKDT 59 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p--~~~~~w~~~~--~---~~~-------------~~~~~~~~~~--~~~~~l~i~~~~~~ 59 (126)
.+.+.+|+++.|.|.+.+.+ .+.+.|++.. . .+. ...++.+..+ .....|.|.+++..
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 88 (232)
T 1dn0_B 9 AGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAA 88 (232)
T ss_dssp CCEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred CEEEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCCcc
Confidence 45678999999999998764 5789999842 1 110 1246665542 34568999999999
Q ss_pred CCEEEEEEEe--cCCc----eeEEEEEEEecC---CCCeec-cCc--ceeCC-CeeEEEEEEccCCc
Q psy12132 60 DFGNYMCQAS--NNLG----SSQQFIQLSGIP---NIPVFQ-KSS--RRLGP-DGYRLVWQVDTYSA 113 (126)
Q Consensus 60 d~g~y~C~~~--~~~~----~~~~~~~l~~~~---~~~~~~-~~~--~~~~~-~~~~l~~~~~~~~~ 113 (126)
|.|.|.|.+. +..+ .......|.|.. .+|... ..+ ....+ +.+.|.|.+.+..|
T Consensus 89 D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~~~~g~~~v~L~C~~~g~~P 155 (232)
T 1dn0_B 89 DTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVSCENSPSDTSSVAVGCLAQDFLP 155 (232)
T ss_dssp GCEEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEECC------CCSEEEEEEEEEEBS
T ss_pred cCEEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEeccccccCCCCCcEEEEEEEEEEeC
Confidence 9999999998 3211 111223455432 223222 111 12245 78999999976633
No 311
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.34 E-value=9.7e-12 Score=72.71 Aligned_cols=84 Identities=25% Similarity=0.551 Sum_probs=63.6
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEE----CCEEeccCCc--EEEEe-----cCCeEEEEEecCCCCCCEEEEEEEecC
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFR----DGTAITLGGR--IDMHV-----SSEKHSLLVRHIKDTDFGNYMCQASNN 71 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~----~~~~~~~~~~--~~~~~-----~~~~~~l~i~~~~~~d~g~y~C~~~~~ 71 (126)
..+..|+.+.|.|.+.+.|.+.+.|++ ++..+..... ..... ......|.|.++...|.|.|+|.+.|.
T Consensus 128 ~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 207 (231)
T 3ojm_B 128 ASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNY 207 (231)
T ss_dssp EEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCBCEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEET
T ss_pred eEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcceEeEecccccccCCccEEEEecCCHHHCeEEEEEEEec
Confidence 456679999999999999999999999 6665543321 11111 111246999999999999999999999
Q ss_pred CceeEEEEEEEecCC
Q psy12132 72 LGSSQQFIQLSGIPN 86 (126)
Q Consensus 72 ~~~~~~~~~l~~~~~ 86 (126)
.|.....+.|.+...
T Consensus 208 ~g~~~~~~~l~V~~~ 222 (231)
T 3ojm_B 208 IGQANQSAWLTVLPK 222 (231)
T ss_dssp TEEEEEEEEEEEECC
T ss_pred cceEeeEEEEEEecC
Confidence 998888888877543
No 312
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.33 E-value=1.1e-11 Score=79.30 Aligned_cols=109 Identities=12% Similarity=0.156 Sum_probs=70.1
Q ss_pred ccCCccEEEEEEeeecC----CCeeEEEECCEEeccCCc--EEEEecC---CeEEEEEecCCCCCCEEEEEEEecCCcee
Q psy12132 5 TAPDMRAEIICNVYANP----PAKVEWFRDGTAITLGGR--IDMHVSS---EKHSLLVRHIKDTDFGNYMCQASNNLGSS 75 (126)
Q Consensus 5 ~~~g~~~~l~C~~~~~p----~~~~~w~~~~~~~~~~~~--~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 75 (126)
+.+|+++.|.|.+.+.+ .+.+.|++++..+..... .....++ ....|.|.++...|.|.|+|.+.|..+..
T Consensus 252 ~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~ 331 (444)
T 1igt_B 252 LMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDLPA 331 (444)
T ss_dssp HCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECTTCSS
T ss_pred eecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcCCCCC
Confidence 46799999999999874 358999999987653221 1111111 23479999999999999999999987765
Q ss_pred EEEEEEEe---cCCCCeecc-Cc--ceeCCCeeEEEEEEccCCc
Q psy12132 76 QQFIQLSG---IPNIPVFQK-SS--RRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 76 ~~~~~l~~---~~~~~~~~~-~~--~~~~~~~~~l~~~~~~~~~ 113 (126)
.....+.. ...+|.+.. .. ....+..+.|.|...+..|
T Consensus 332 ~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P 375 (444)
T 1igt_B 332 PIERTISKPKGSVRAPQVYVLPPPEEEMTKKQVTLTCMVTDFMP 375 (444)
T ss_dssp CEEEEEECCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBS
T ss_pred ceEEEEeccCCCCCCCEEEEeCCChHHccCCeEEEEEEEEeeeC
Confidence 32223321 223343321 11 1223445999999977533
No 313
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.33 E-value=2.7e-11 Score=68.58 Aligned_cols=72 Identities=19% Similarity=0.310 Sum_probs=56.4
Q ss_pred eeccCCccEEEEEEeeecCCC-eeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeE-EEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPA-KVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQ-QFIQ 80 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~-~~~~ 80 (126)
+.+..|+.+.|.|.+.+.|.| .+.|++++..+..... ....|.|.++ .|.|.|+|.+.|..|... ..+.
T Consensus 108 ~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~-------~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~s~~~~ 178 (182)
T 1rhf_A 108 LAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAP-------SPSVLNVTGV--TQSTMFSCEAHNLKGLASSRTAT 178 (182)
T ss_dssp EEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSEE-------SSEEEEECCC--SSCEEEEEEEEETTEEEECCCEE
T ss_pred eEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCCC-------CceEEEEecc--ccCeEEEEEEECCCCCcccceEE
Confidence 457789999999999999999 9999999987753321 2347888888 588999999999988764 3555
Q ss_pred EEe
Q psy12132 81 LSG 83 (126)
Q Consensus 81 l~~ 83 (126)
|.+
T Consensus 179 l~V 181 (182)
T 1rhf_A 179 VHL 181 (182)
T ss_dssp EEE
T ss_pred EEe
Confidence 543
No 314
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.33 E-value=4.4e-12 Score=83.45 Aligned_cols=106 Identities=16% Similarity=0.173 Sum_probs=72.6
Q ss_pred eeccCCccEEEEEEe-eecCCCeeEEEECCEEec------------cCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEe
Q psy12132 3 SITAPDMRAEIICNV-YANPPAKVEWFRDGTAIT------------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQAS 69 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~-~~~p~~~~~w~~~~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 69 (126)
+.+.+|++++|.|.+ .+.|.+.+.|++++..+. ...+.....++ +|.|.+++..|.|.|+|.+.
T Consensus 376 ~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~L~i~~v~~~D~G~Y~C~~~ 452 (581)
T 3o3u_N 376 ITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNG---SLFLPAVGIQDEGIFRCQAM 452 (581)
T ss_dssp EEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTS---CEEESSCCGGGCEEEEEEEE
T ss_pred cceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCc---eEEEeccccccCeEEEEEEE
Confidence 567889999999998 778889999999764211 01233333333 79999999999999999999
Q ss_pred cCCcee-EEEEEEEec--CCCCeeccCcc-eeC-CCeeEEEEEEccC
Q psy12132 70 NNLGSS-QQFIQLSGI--PNIPVFQKSSR-RLG-PDGYRLVWQVDTY 111 (126)
Q Consensus 70 ~~~~~~-~~~~~l~~~--~~~~~~~~~~~-~~~-~~~~~l~~~~~~~ 111 (126)
+..+.. ...+.|.|. +..|.+..... ... ...+.|+|.+.+.
T Consensus 453 n~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~~~~~~~~l~C~~~~~ 499 (581)
T 3o3u_N 453 NRNGKETKSNYRVRVYQIPGKPEIVDSASELTAGVPNKVGTCVSEGS 499 (581)
T ss_dssp CTTSCEEEEEEEEEEEBCCCCCEEESCCSEECTTSCEEEEEEEEEEE
T ss_pred cCCCceeEEEEEEEEEcCCCCCEEEcCCcccccCCceeEEEEECCCC
Confidence 988766 566666653 33343333222 222 3344679998764
No 315
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=99.33 E-value=2.1e-11 Score=65.54 Aligned_cols=82 Identities=17% Similarity=0.349 Sum_probs=58.9
Q ss_pred eeccCCccEEEEEEeeecCC---CeeEEEECCEE--e---------c------cCCcEEEEecC---CeEEEEEecCCCC
Q psy12132 3 SITAPDMRAEIICNVYANPP---AKVEWFRDGTA--I---------T------LGGRIDMHVSS---EKHSLLVRHIKDT 59 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~---~~~~w~~~~~~--~---------~------~~~~~~~~~~~---~~~~l~i~~~~~~ 59 (126)
+....|++++|.|.+...+. ..+.|+|++.. + . ...+..+..+. ++.+|.|.+++..
T Consensus 15 v~g~vG~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~R~~~~~~~~~~g~~sL~I~~v~~~ 94 (125)
T 4gos_A 15 SAGNIGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNVQLT 94 (125)
T ss_dssp EEEETTSCEEEEEEECCCSCGGGCEEEEEETTCSSBSEEEETTEECCTTBCGGGTTCEEECTTTGGGTBCCEEESSCCGG
T ss_pred EEEeCCCCEEEEEEEcCCcccCcEEEEEEEeccCceEEEEEeecccccccCccccceEEEecCCccCCeEEEEECCCChH
Confidence 45678999999999864333 36899985421 1 0 01233332221 2468999999999
Q ss_pred CCEEEEEEEecCCceeEEEEEEEec
Q psy12132 60 DFGNYMCQASNNLGSSQQFIQLSGI 84 (126)
Q Consensus 60 d~g~y~C~~~~~~~~~~~~~~l~~~ 84 (126)
|.|.|.|.+.+..+...+.+.|.|-
T Consensus 95 D~G~Y~C~v~~~~g~~~~~v~LkVG 119 (125)
T 4gos_A 95 DAGTYKCYIITSKGKGNANLEYKTG 119 (125)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred HCEEEEEEEEeCCCeEEEEEEEEEC
Confidence 9999999999999999998888874
No 316
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.33 E-value=4.2e-11 Score=71.95 Aligned_cols=111 Identities=15% Similarity=0.163 Sum_probs=67.8
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEEC--CEE---ec-c-C----------C-cEEEEe-cCCeEEEEEecCCCCCCE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRD--GTA---IT-L-G----------G-RIDMHV-SSEKHSLLVRHIKDTDFG 62 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~--~~~---~~-~-~----------~-~~~~~~-~~~~~~l~i~~~~~~d~g 62 (126)
.+.+.+|+++.|.|.+.+ +.+.+.|++. +.. +. . . . ++.... ......|.|.+++..|.|
T Consensus 36 ~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G 114 (270)
T 3qib_D 36 YLVKGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSA 114 (270)
T ss_dssp EEEEETTSCEEEEEECCT-TCCEEEEEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGGCE
T ss_pred eEEEcCCCCEEEEEEecC-CCceEEEEEECCCCCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhHCe
Confidence 367889999999999864 7789999982 111 10 0 0 0 444432 234578999999999999
Q ss_pred EEEEEEecCC----ceeEEEEEEEecC-----CCCeec-cCcc---eeCCCeeEEEEEEccCCc
Q psy12132 63 NYMCQASNNL----GSSQQFIQLSGIP-----NIPVFQ-KSSR---RLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 63 ~y~C~~~~~~----~~~~~~~~l~~~~-----~~~~~~-~~~~---~~~~~~~~l~~~~~~~~~ 113 (126)
.|.|.+.+.. ........+.+.. .+|... ..+. ...++.+.|+|...+..|
T Consensus 115 ~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P 178 (270)
T 3qib_D 115 LYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYP 178 (270)
T ss_dssp EEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBS
T ss_pred EEEEEEecCCCccceEECCcEEEEEccccccccCCceEEECCCccccccCCceEEEEEecceeC
Confidence 9999998632 1122222344332 123222 1111 123678999999977433
No 317
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.32 E-value=1.3e-12 Score=79.77 Aligned_cols=79 Identities=23% Similarity=0.263 Sum_probs=61.5
Q ss_pred eccCCccEEEEEEeeecCCC-eeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEEE
Q psy12132 4 ITAPDMRAEIICNVYANPPA-KVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLS 82 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~p~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~ 82 (126)
.+..|+.+.|.|.+.|.|.| .+.|++++..+..... . .....+.|.++...|.|.|+|.+.|..|.....+.|.
T Consensus 223 ~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~~~~~---~--~~~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~~~l~ 297 (308)
T 4fom_A 223 WFVGRKGVNLKCNADANPPPFKSVWSRLDGQWPDGLL---A--SDNTLHFVHPLTFNYSGVYICKVTNSLGQRSDQKVIY 297 (308)
T ss_dssp EETTCCSCEEECCEEEESCEEEEECCBSSSCCCSSCB---C--STTEEECCSCCCSCCCSEEEEEEEETTEEEEEEEECC
T ss_pred eeeccccEEEEEEEecCCCCcEEEEEECCeECCCcEE---E--cCCeEEEECCCChhhCEEEEEEEEeCCCcEEEEEEEE
Confidence 45668899999999999988 6999998866543321 1 1223677888999999999999999999988888887
Q ss_pred ecCCC
Q psy12132 83 GIPNI 87 (126)
Q Consensus 83 ~~~~~ 87 (126)
|...|
T Consensus 298 V~~~P 302 (308)
T 4fom_A 298 ISDPP 302 (308)
T ss_dssp EECCC
T ss_pred EEcCC
Confidence 75443
No 318
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.32 E-value=1.8e-10 Score=68.11 Aligned_cols=111 Identities=14% Similarity=0.228 Sum_probs=70.1
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECC--E---Eec------------cCCcEEEEe-cCCeEEEEEecCCCCCCEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDG--T---AIT------------LGGRIDMHV-SSEKHSLLVRHIKDTDFGN 63 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~--~---~~~------------~~~~~~~~~-~~~~~~l~i~~~~~~d~g~ 63 (126)
.+.+.+|+++.|.|.+. .+.+.+.|++++ . .+. ...++.+.. ......|.|.+++..|.|.
T Consensus 8 ~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D~G~ 86 (238)
T 1bec_A 8 NKVAVTGGKVTLSCQQT-NNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELATPSQTSV 86 (238)
T ss_dssp EEEEETTCCEEEEEEES-SCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCCGGGCEE
T ss_pred eeEEeCCCcEEEEEEeC-CCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCCcccCEE
Confidence 46788999999999985 467899999853 1 110 124554443 2345689999999999999
Q ss_pred EEEEEecCCc-----eeEEEEEEEecC-----CCCeec-cCcc---eeCCCeeEEEEEEccCCc
Q psy12132 64 YMCQASNNLG-----SSQQFIQLSGIP-----NIPVFQ-KSSR---RLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 64 y~C~~~~~~~-----~~~~~~~l~~~~-----~~~~~~-~~~~---~~~~~~~~l~~~~~~~~~ 113 (126)
|.|.+.+..+ .......|.+.. .+|... ..+. ...++.+.|.|.+.+..|
T Consensus 87 Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P 150 (238)
T 1bec_A 87 YFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQKATLVCLARGFFP 150 (238)
T ss_dssp EEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECCCSTTCSSSCSCSEEEEEEEEBS
T ss_pred EEEEEecCCCCccccccCCCEEEEEeccCCCCCCCceEEECCChHHcccCCceEEEEEEeeEeC
Confidence 9999988631 111122344322 233332 2111 124678899999977533
No 319
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.31 E-value=1e-11 Score=71.53 Aligned_cols=79 Identities=13% Similarity=0.088 Sum_probs=59.6
Q ss_pred eccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEEEe
Q psy12132 4 ITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSG 83 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~~ 83 (126)
.+..|+.+.|.|.+.|.|.|.+.|++++..+.. .......+....+.+..+...|.|.|+|.+.|..|.....+.+.+
T Consensus 114 ~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~--~~~~~~~~~~~~~~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v 191 (202)
T 3bp6_B 114 EVPGTGEVQLTCQARGYPLAEVSWQNVSVPANT--SHIRTPEGLYQVTSVLRLKPQPSRNFSCMFWNAHMKELTSAIIDP 191 (202)
T ss_dssp ECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEE--EEEECTTSCEEEEEEEEECCCTTCCEEEEEEETTTTEEEEEEECC
T ss_pred ecCCCCeEEEEEEccccCCceEEEEeCCCCccC--ceeeCCCCCEEEEEEEEEEcCCCCEEEEEEEcCCcccccEEEEEe
Confidence 356799999999999999999999987654321 111122233346778889999999999999999998888887775
Q ss_pred c
Q psy12132 84 I 84 (126)
Q Consensus 84 ~ 84 (126)
.
T Consensus 192 ~ 192 (202)
T 3bp6_B 192 L 192 (202)
T ss_dssp -
T ss_pred c
Confidence 3
No 320
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=99.31 E-value=1.5e-11 Score=65.03 Aligned_cols=82 Identities=21% Similarity=0.291 Sum_probs=56.9
Q ss_pred eeccCCccEEEEEEee-ecCCCe----eEEEECCEE--e-----------ccCCcEEEEecC-----CeEEEEEecCCCC
Q psy12132 3 SITAPDMRAEIICNVY-ANPPAK----VEWFRDGTA--I-----------TLGGRIDMHVSS-----EKHSLLVRHIKDT 59 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~-~~p~~~----~~w~~~~~~--~-----------~~~~~~~~~~~~-----~~~~l~i~~~~~~ 59 (126)
+.+.+|+++.|.|.+. +.+.+. +.|++++.. + ....++.+.... ...+|.|.+++..
T Consensus 10 v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~ 89 (118)
T 3udw_C 10 VPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRVE 89 (118)
T ss_dssp EEEETTSCEEECCEEECCTTCCCEEEEEEEEETTCSBCSEEEETTTEEEETTCSSEEETTCCTTSCCCBCCEEECSCCGG
T ss_pred EEEeeCCcEEEEEEeECCCCCCCceEEEEEEEcCCCceEEEEeCCCCCccCCcCcEEEecccccCCCCCcEEEEeecChH
Confidence 5678899999999994 444443 899997421 1 112334332211 1458999999999
Q ss_pred CCEEEEEEEec-CCceeEEEEEEEec
Q psy12132 60 DFGNYMCQASN-NLGSSQQFIQLSGI 84 (126)
Q Consensus 60 d~g~y~C~~~~-~~~~~~~~~~l~~~ 84 (126)
|.|.|.|.+.+ ..+.......|.|.
T Consensus 90 D~G~Y~C~v~~~~~~~~~~~~~L~V~ 115 (118)
T 3udw_C 90 DEGNYTCLFVTFPQGSRSVDIWLRVL 115 (118)
T ss_dssp GCEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred HCeEEEEEEEECCCCCccceEEEEEE
Confidence 99999999988 66666677777664
No 321
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.31 E-value=1.3e-11 Score=72.78 Aligned_cols=109 Identities=11% Similarity=0.090 Sum_probs=68.0
Q ss_pred ccCCccEEEEEEeeec-CC-C-eeEEEECCEEe-ccCCcEEEE-ecC---CeEEEEEecCCCCCCEEEEEEEecCCceeE
Q psy12132 5 TAPDMRAEIICNVYAN-PP-A-KVEWFRDGTAI-TLGGRIDMH-VSS---EKHSLLVRHIKDTDFGNYMCQASNNLGSSQ 76 (126)
Q Consensus 5 ~~~g~~~~l~C~~~~~-p~-~-~~~w~~~~~~~-~~~~~~~~~-~~~---~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 76 (126)
+..|+++.|.|.+.+. |. | .+.|++++..+ ......... .++ ....|.|.++...|.|.|+|.+.+..+...
T Consensus 25 v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~~ 104 (231)
T 2w59_A 25 LYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGERFTCTVQHEELPLP 104 (231)
T ss_dssp HHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTCSSC
T ss_pred cccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCCCEEEEEEEcCCCCCc
Confidence 4689999999999885 63 4 99999988765 222211111 111 124689999988999999999998765544
Q ss_pred EEEEEEec---CCCCee-ccCc--ceeCCCeeEEEEEEccCCc
Q psy12132 77 QFIQLSGI---PNIPVF-QKSS--RRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 77 ~~~~l~~~---~~~~~~-~~~~--~~~~~~~~~l~~~~~~~~~ 113 (126)
..+.+... ..+|.. ...+ ....+..+.|+|.+.+..|
T Consensus 105 ~~~~v~~~~~~~~~P~v~v~~~~~~~~~~~~~~L~C~~~g~~P 147 (231)
T 2w59_A 105 LSKSVYRNTGPTTPPLIYPFAPHPEELSLSRVTLSCLVRGFRP 147 (231)
T ss_dssp EEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBS
T ss_pred eEEEEecCCCCCcCCEEEEeCCCHHHhccCceEEEEEEEeccC
Confidence 44444321 123322 2111 1122457899999977544
No 322
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=99.31 E-value=3.7e-11 Score=63.00 Aligned_cols=70 Identities=16% Similarity=0.367 Sum_probs=53.8
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECC-----EEec---------cCCcEEEEecCCeEEEEEecCCCCCCEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDG-----TAIT---------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQ 67 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~-----~~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 67 (126)
.+.+.+|+++.|.|.+.+.+.+.+.|++.. ..+. ...++..........|.|.+++..|.|.|.|.
T Consensus 12 ~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 91 (109)
T 2q20_A 12 SLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQ 91 (109)
T ss_dssp EEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred EEEecCCCcEEEEEeeccCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEeccCCEEEEEECCCChhhCEEEEEE
Confidence 467889999999999987777899999853 1121 13466655444567899999999999999999
Q ss_pred EecC
Q psy12132 68 ASNN 71 (126)
Q Consensus 68 ~~~~ 71 (126)
+.+.
T Consensus 92 ~~~~ 95 (109)
T 2q20_A 92 QYDN 95 (109)
T ss_dssp ECSS
T ss_pred EeeC
Confidence 8764
No 323
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=99.31 E-value=3e-11 Score=63.28 Aligned_cols=70 Identities=17% Similarity=0.380 Sum_probs=52.9
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECC-----EEec---------cCCcEEEEecCCeEEEEEecCCCCCCEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDG-----TAIT---------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQ 67 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~-----~~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 67 (126)
.+.+.+|+++.|.|.+.+.+.+.+.|++.. ..+. ...++..........|.|.+++..|+|.|.|.
T Consensus 10 ~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 89 (108)
T 1qfw_M 10 SMSMSVGERVTLSCKASETVDSFVSWYQQKPEQSPKLLIFGASNRFSGVPDRFTGSGSATDFTLTISSVQAEDFADYHCG 89 (108)
T ss_dssp CEECCTTCCEEEEEEESSCCCSCEEEEEECTTSCCEEEECSSSCBCTTCCTTEECCBCSSEEEEEESSCCTTCCSEEEEE
T ss_pred eEEEcCCCCEEEEeeeCCCCCcEEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEEcCCCEEEEEECCCChhhCEEEEEE
Confidence 467889999999999987777789999843 1121 12355544334456899999999999999999
Q ss_pred EecC
Q psy12132 68 ASNN 71 (126)
Q Consensus 68 ~~~~ 71 (126)
+.+.
T Consensus 90 ~~~~ 93 (108)
T 1qfw_M 90 QTYN 93 (108)
T ss_dssp ECSS
T ss_pred EccC
Confidence 8874
No 324
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.31 E-value=2.3e-11 Score=72.19 Aligned_cols=109 Identities=13% Similarity=0.226 Sum_probs=67.7
Q ss_pred ccCCccEEEEEEeeec---CCC-eeEEEECCEEeccCCc-E-EEEecC---CeEEEEEecCCCCCCEEEEEEEecCCcee
Q psy12132 5 TAPDMRAEIICNVYAN---PPA-KVEWFRDGTAITLGGR-I-DMHVSS---EKHSLLVRHIKDTDFGNYMCQASNNLGSS 75 (126)
Q Consensus 5 ~~~g~~~~l~C~~~~~---p~~-~~~w~~~~~~~~~~~~-~-~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 75 (126)
+.+|+++.|.|.+.+. |.+ .+.|++++..+..... . ....++ ....|.|.+++..|.|.|+|.+.+..+..
T Consensus 29 v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~ 108 (239)
T 1i1c_A 29 LGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTFKCKVNSGAFPA 108 (239)
T ss_dssp TTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECSSSSS
T ss_pred cccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCCeEEEEEecccCCC
Confidence 5689999999999877 766 8999998755432100 0 000111 12479999999999999999999887654
Q ss_pred EEEEEEE---ecCCCCeec-cCc--ceeCCCeeEEEEEEccCCc
Q psy12132 76 QQFIQLS---GIPNIPVFQ-KSS--RRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 76 ~~~~~l~---~~~~~~~~~-~~~--~~~~~~~~~l~~~~~~~~~ 113 (126)
.....+. ....+|.+. ... ....+..+.|+|.+.+..|
T Consensus 109 ~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P 152 (239)
T 1i1c_A 109 PIEKSISKPEGTPRGPQVYTMAPPKEEMTQSQVSITCMVKGFYP 152 (239)
T ss_dssp CEEEEECCCSSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBS
T ss_pred CcEEEEecCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeeeEC
Confidence 2222221 112233322 111 1124567999999977544
No 325
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.31 E-value=5.2e-12 Score=81.09 Aligned_cols=79 Identities=25% Similarity=0.374 Sum_probs=62.2
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEEC-CEEeccC---CcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRD-GTAITLG---GRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQ 77 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~-~~~~~~~---~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 77 (126)
++.+.+|+++.|.|.+. |.|.+.|+++ +..+... .++....++ +|.|.+++..|.|.|+|.+.|..|...+
T Consensus 361 ~~~v~~G~~~~l~C~~~--p~p~i~W~~~~~~~~~~~~~~~~~~~~~~g---~L~i~~v~~~D~G~Y~C~a~N~~G~~~~ 435 (452)
T 3zyi_A 361 DLNISEGRMAELKCRTP--PMSSVKWLLPNGTVLSHASRHPRISVLNDG---TLNFSHVLLSDTGVYTCMVTNVAGNSNA 435 (452)
T ss_dssp CEECCTTSCCEECCBCC--TTSEEEEECTTSCEECSSCCCSSCEECTTS---CEECSSCCTTCCEEEEEEEECSSCEEEE
T ss_pred cccccCCCEEEEEEeCC--CCCcEEEEeCCCcEeccCCCCCCEEECCCC---eEEEeecCHHHCEEEEEEEEcCCCcEEE
Confidence 35678899999999987 8999999994 4444322 244444444 6999999999999999999999999999
Q ss_pred EEEEEecC
Q psy12132 78 FIQLSGIP 85 (126)
Q Consensus 78 ~~~l~~~~ 85 (126)
.+.+.|..
T Consensus 436 ~~~l~v~~ 443 (452)
T 3zyi_A 436 SAYLNVST 443 (452)
T ss_dssp EEEEEC--
T ss_pred EEEEEEEc
Confidence 88888753
No 326
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.30 E-value=3.8e-11 Score=81.09 Aligned_cols=111 Identities=12% Similarity=0.073 Sum_probs=58.3
Q ss_pred eeccCCccEEEEEEeeec--CCCeeEEEECCEEeccCCcEEE--------EecCCeEEEEEecCCCCCCEEEEEEEecCC
Q psy12132 3 SITAPDMRAEIICNVYAN--PPAKVEWFRDGTAITLGGRIDM--------HVSSEKHSLLVRHIKDTDFGNYMCQASNNL 72 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~--p~~~~~w~~~~~~~~~~~~~~~--------~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 72 (126)
+.+.+|+++.|.|.+.+. +.+.+.|++++..+........ ........|.|.++...|.|.|+|.+.+..
T Consensus 234 ~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~ 313 (772)
T 3v2a_R 234 IELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGL 313 (772)
T ss_dssp EEEETTCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECSS
T ss_pred eEEecCCcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcCC
Confidence 467889999999999874 4568999998876543222111 011123579999999999999999999988
Q ss_pred ceeEEEEEEEecCCCCeecc-----CcceeCCCeeEEEEEEccCCc
Q psy12132 73 GSSQQFIQLSGIPNIPVFQK-----SSRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 73 ~~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~l~~~~~~~~~ 113 (126)
+.....+.+.+...|..... ......++.+.|.|...+.++
T Consensus 314 ~~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~ 359 (772)
T 3v2a_R 314 MTKKNSTFVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYLGYPP 359 (772)
T ss_dssp CEEEEEEEEEEECCCC------------------------------
T ss_pred cceeEEEEEEEeCCCeeEeccCCCCcEEEcCCCcEEEEEEEeeeCC
Confidence 87777777776543322111 122346778899999877543
No 327
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.30 E-value=5.1e-11 Score=69.40 Aligned_cols=84 Identities=12% Similarity=0.065 Sum_probs=57.7
Q ss_pred eccCCccEEEEEEeeecCCCeeEEEEC-CEEeccCCcEEEEe--cCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEE
Q psy12132 4 ITAPDMRAEIICNVYANPPAKVEWFRD-GTAITLGGRIDMHV--SSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQ 80 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~p~~~~~w~~~-~~~~~~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 80 (126)
.+..|+.+.|.|.+.|.|.|.+.|+++ +..+.......... .+.........+...|.|.|+|.+.|..|.......
T Consensus 127 ~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~ 206 (222)
T 3sbw_C 127 VDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAE 206 (222)
T ss_dssp EETTTTEEEEEEEEEEBSCCEEEEEETTCCEECCEEEEEECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEE
T ss_pred eecCCCcEEEEEEecCCCCCeEEEEECCCceecCccceEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEE
Confidence 456799999999999999999999998 55543322211111 111122333345578999999999999999988888
Q ss_pred EEecCCC
Q psy12132 81 LSGIPNI 87 (126)
Q Consensus 81 l~~~~~~ 87 (126)
+.+...|
T Consensus 207 l~v~~~p 213 (222)
T 3sbw_C 207 LVIPELP 213 (222)
T ss_dssp EECCCC-
T ss_pred EEecCCc
Confidence 8875433
No 328
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.30 E-value=5.3e-11 Score=70.10 Aligned_cols=121 Identities=13% Similarity=0.154 Sum_probs=72.1
Q ss_pred ceeccCCccEEEEEEeeec--CCCeeEEEECC-----EEec-------------cCCcEEEEecC--CeEEEEEecCCCC
Q psy12132 2 HSITAPDMRAEIICNVYAN--PPAKVEWFRDG-----TAIT-------------LGGRIDMHVSS--EKHSLLVRHIKDT 59 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~--p~~~~~w~~~~-----~~~~-------------~~~~~~~~~~~--~~~~l~i~~~~~~ 59 (126)
.+.+.+|+++.|.|.+.+. +.+.+.|++.. ..+. ...++.+..+. ....|.|.+++..
T Consensus 10 ~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 89 (230)
T 1ypz_F 10 SISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYSLEEE 89 (230)
T ss_dssp EEEEETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEECSCCGG
T ss_pred EEEEeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEECcCChh
Confidence 3567899999999999764 56789999842 1110 12455554322 4568999999999
Q ss_pred CCEEEEEEEecC--Cc--eeEEEEEEEecC--------CCCe-eccCcce---eCCCeeEEEEEEccCCcceeEEEEEEE
Q psy12132 60 DFGNYMCQASNN--LG--SSQQFIQLSGIP--------NIPV-FQKSSRR---LGPDGYRLVWQVDTYSAIIQYLLKFRE 123 (126)
Q Consensus 60 d~g~y~C~~~~~--~~--~~~~~~~l~~~~--------~~~~-~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~r~ 123 (126)
|.|.|.|.+.+. .. .......|.|.+ .+|. ....+.. ..++.+.|+|.+.+..|. ...+.|.+
T Consensus 90 D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~~p~~~~v~~g~~~~L~C~~~g~~P~-~~~v~W~~ 168 (230)
T 1ypz_F 90 DEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEAFFPD-VIRVYWKE 168 (230)
T ss_dssp GCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEECCCHHHHHHHSCEEEEEEEEEESSC-CCEEEEEC
T ss_pred hCEEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceEECCCchhhccCCcceEEEEEeeecCC-CeEEEEEc
Confidence 999999999874 11 111222344431 1111 1111111 135678999999766442 12455554
No 329
>1zox_A CLM-1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, structural genomics, PSI, protein structure initiative; 2.10A {Mus musculus}
Probab=99.30 E-value=9.9e-11 Score=61.69 Aligned_cols=85 Identities=11% Similarity=0.122 Sum_probs=60.6
Q ss_pred ceeccCCccEEEEEEeeecCC-CeeEEEECCE-----Eec---------cCCcEEEEe--cCCeEEEEEecCCCCCCEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPP-AKVEWFRDGT-----AIT---------LGGRIDMHV--SSEKHSLLVRHIKDTDFGNY 64 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~-~~~~w~~~~~-----~~~---------~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y 64 (126)
.+.+.+|+++.|.|...+... ..+.|++... .+. ...++.+.. ......|.|.+++..|+|.|
T Consensus 10 ~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~~~~DsG~Y 89 (113)
T 1zox_A 10 EVSGQEQGSLTVQCRYTSGWKDYKKYWCQGVPQRSCKTLVETDASEQLVKKNRVSIRDNQRDFIFTVTMEDLRMSDAGIY 89 (113)
T ss_dssp EEEEETTSCEEEEEEECGGGTTSCEEEEESSSGGGCEEEEECCSSSCCEEETTEEEEEETTTTEEEEEECSCCGGGCEEE
T ss_pred EEEEeCCCcEEEEeECCCCcccceEEEEeCCCCCCCeEEEEecCccccccCCCEEEEECCcCCEEEEEEccCCHHHCEEE
Confidence 357889999999999975433 3699998641 121 124555542 23456899999999999999
Q ss_pred EEEEecCCceeEEEEEEEecCC
Q psy12132 65 MCQASNNLGSSQQFIQLSGIPN 86 (126)
Q Consensus 65 ~C~~~~~~~~~~~~~~l~~~~~ 86 (126)
.|.+.+........+.|.|.+.
T Consensus 90 ~C~v~~~~~~~~~~v~L~V~~~ 111 (113)
T 1zox_A 90 WCGITKGGLDPMFKVTVNIGPV 111 (113)
T ss_dssp EEEECCSSSCCEEEEEEEEECC
T ss_pred EEeeEcCCCCccEEEEEEEEcC
Confidence 9999887555567777777543
No 330
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.30 E-value=2.8e-11 Score=70.55 Aligned_cols=82 Identities=17% Similarity=0.138 Sum_probs=59.8
Q ss_pred eccCCccEEEEEEe-eecCCCeeEEEE-CCEEeccCCcEEEE--ecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEE
Q psy12132 4 ITAPDMRAEIICNV-YANPPAKVEWFR-DGTAITLGGRIDMH--VSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFI 79 (126)
Q Consensus 4 ~~~~g~~~~l~C~~-~~~p~~~~~w~~-~~~~~~~~~~~~~~--~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 79 (126)
.+..|+.+.|.|.+ .+.|.+.+.|++ ++..+......... ..+....|.+.++...|.|.|+|.+.|..|.....+
T Consensus 121 ~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~ 200 (222)
T 4i0k_A 121 DLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVTTSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHG 200 (222)
T ss_dssp ---CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEEEEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEE
T ss_pred eecCCceEEEEEecccccCCCeEEEEcCCCccCCCCcceeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEE
Confidence 35578999999999 788999999998 44444322222222 122234588999999999999999999999998888
Q ss_pred EEEecC
Q psy12132 80 QLSGIP 85 (126)
Q Consensus 80 ~l~~~~ 85 (126)
.+.+..
T Consensus 201 ~l~V~~ 206 (222)
T 4i0k_A 201 SVTITG 206 (222)
T ss_dssp EEECCC
T ss_pred EEEEeC
Confidence 888753
No 331
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=99.30 E-value=5.3e-11 Score=62.21 Aligned_cols=70 Identities=16% Similarity=0.340 Sum_probs=53.9
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECC-----EEec---------cCCcEEEEecCCeEEEEEecCCCCCCEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDG-----TAIT---------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQ 67 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~-----~~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 67 (126)
.+.+.+|++++|.|.+.+.+.+.+.|++.. ..+. ...++..........|.|.+++..|+|.|.|.
T Consensus 10 ~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 89 (107)
T 1i8k_A 10 SLSVATGEKVTIRCMTSTDIDDDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSGTGTDFVFTIENTLSEDVGDYYCL 89 (107)
T ss_dssp EEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred eEEecCCCCEEEEEEECCCCCCcEEEEEECCCCCCEEEEEecCccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEEE
Confidence 467889999999999987777889999842 1121 13466655445567899999999999999999
Q ss_pred EecC
Q psy12132 68 ASNN 71 (126)
Q Consensus 68 ~~~~ 71 (126)
+.+.
T Consensus 90 ~~~~ 93 (107)
T 1i8k_A 90 QSFN 93 (107)
T ss_dssp ECSS
T ss_pred EeeC
Confidence 8764
No 332
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.29 E-value=3.1e-11 Score=72.36 Aligned_cols=112 Identities=13% Similarity=0.172 Sum_probs=66.8
Q ss_pred ceeccCCccEEEEEEeeecC--CCeeEEEECC--E---Eec--------------cCCcEEEEec--CCeEEEEEecCCC
Q psy12132 2 HSITAPDMRAEIICNVYANP--PAKVEWFRDG--T---AIT--------------LGGRIDMHVS--SEKHSLLVRHIKD 58 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p--~~~~~w~~~~--~---~~~--------------~~~~~~~~~~--~~~~~l~i~~~~~ 58 (126)
.+.+.+|+++.|.|.+.+.+ .+.+.|++.. . .+. ...++.+..+ .....|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (257)
T 3bn9_D 9 GGLVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSLRA 88 (257)
T ss_dssp CEEECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESCCG
T ss_pred CEEEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCCCh
Confidence 45788999999999998765 5789999842 1 110 1246655543 3456899999999
Q ss_pred CCCEEEEEEEecCCc----------e---eEEEEEEEecC---CCCeec-cCc--ceeCCCeeEEEEEEccCCc
Q psy12132 59 TDFGNYMCQASNNLG----------S---SQQFIQLSGIP---NIPVFQ-KSS--RRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 59 ~d~g~y~C~~~~~~~----------~---~~~~~~l~~~~---~~~~~~-~~~--~~~~~~~~~l~~~~~~~~~ 113 (126)
.|.|.|.|.+.+..| . ......|.|.. .+|... ..+ ....++.+.|.|.+.+..|
T Consensus 89 ~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~~~P~v~~~~p~~~~~~g~~v~L~C~~~g~~P 162 (257)
T 3bn9_D 89 EDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFP 162 (257)
T ss_dssp GGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCCBCCEECCCCC-----------CCCEEEEEBS
T ss_pred hhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCCcCCcEEEecCcccccCCCcEEEEEEEeeEEC
Confidence 999999999988653 1 11223445432 233322 111 1235677899999876533
No 333
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.29 E-value=2.6e-11 Score=70.27 Aligned_cols=55 Identities=22% Similarity=0.474 Sum_probs=44.4
Q ss_pred cCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEec
Q psy12132 6 APDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASN 70 (126)
Q Consensus 6 ~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~ 70 (126)
..|+++.|.|.+ |.+.+.|+|++..+... ......|.|.++...|.|.|+|.+.+
T Consensus 16 ~~G~~v~L~C~~---p~~~i~W~k~g~~l~~~-------~~~~~~L~i~~v~~~DsG~Y~C~~~~ 70 (204)
T 1sy6_A 16 QEDGSVLLTCDA---EAKNITWFKDGKMIGFL-------TEDKKKWNLGSNAKDPRGMYQCKGSQ 70 (204)
T ss_dssp CSSSEEEEEECS---CSSEEEEEETTEEEEEE-------ESSCCCEEEEEGGGCCEEEEEEESSS
T ss_pred cCCCeEEEEEcC---CCCEEEEEECCEECCCC-------CCCCCeEEeCCCCcCCCEEEEEEecC
Confidence 579999999998 78899999999876431 11223799999999999999999655
No 334
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=99.29 E-value=1.3e-12 Score=64.96 Aligned_cols=57 Identities=16% Similarity=0.472 Sum_probs=46.3
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecC-CCCCCEEEEEEEec
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHI-KDTDFGNYMCQASN 70 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~-~~~d~g~y~C~~~~ 70 (126)
..+..|++++|.|.+.+.|. +.|+|++..+... .. ..|.|.++ ...|+|.|+|.+.+
T Consensus 9 ~v~~~G~~v~L~C~~~g~P~--i~W~kdg~~l~~~------~~---~~L~I~~v~~~~DsG~Y~C~A~t 66 (82)
T 3r08_E 9 KVSISGTSVELTCPLDSDEN--LKWEKNGQELPQK------HD---KHLVLQDFSEVEDSGYYVCYTPA 66 (82)
T ss_dssp EEEEETTEEEEECSSCCCSS--CEEEETTEECTTC------CS---SCCBCCSCCTTTTCSCEEEECSS
T ss_pred eEEEcCCeEEEEEECCCCCc--EEEEECCEECcCC------CC---CEEEECccCccCcCEEEEEEEcc
Confidence 45677999999999998873 9999999887543 11 26999996 78999999999875
No 335
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=99.28 E-value=6e-11 Score=63.30 Aligned_cols=70 Identities=20% Similarity=0.368 Sum_probs=54.0
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECC--E---Eec---------cCCcEEEEecCCeEEEEEecCCCCCCEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDG--T---AIT---------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQ 67 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~--~---~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 67 (126)
.+.+.+|+++.|.|.+.+.+.+.+.|++.. . .+. ...++..........|.|.+++..|+|.|.|.
T Consensus 10 ~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~g~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 89 (120)
T 1mqk_L 10 SLSASVGETVTITCRASENIYSYLAWYQQKQGKSPQFLVYNAKTLGEGVPSRFSGSGSGTQFSLKINSLLPEDFGSYYCQ 89 (120)
T ss_dssp EEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred eEEEcCCCcEEEEEEeCCCCCceEEEEEECCCCCCEEEEEeCCcCCCCCCceEEEeccCCEEEEEECCCCHHHCEEEEEE
Confidence 467889999999999987777899999842 1 111 13466655444567899999999999999999
Q ss_pred EecC
Q psy12132 68 ASNN 71 (126)
Q Consensus 68 ~~~~ 71 (126)
+.+.
T Consensus 90 ~~~~ 93 (120)
T 1mqk_L 90 HHYG 93 (120)
T ss_dssp ECSS
T ss_pred EEeC
Confidence 8874
No 336
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.28 E-value=7.1e-11 Score=70.41 Aligned_cols=120 Identities=11% Similarity=0.094 Sum_probs=71.1
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEEC--CEE---e-cc-----------CC-cEEEEecCCeEEEEEecCCCCCCEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRD--GTA---I-TL-----------GG-RIDMHVSSEKHSLLVRHIKDTDFGN 63 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~--~~~---~-~~-----------~~-~~~~~~~~~~~~l~i~~~~~~d~g~ 63 (126)
.+.+.+|+++.|.|.+.+.+.+.+.|++. +.. + .. .. ++......... |.|.+++..|.|.
T Consensus 10 ~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~-L~I~~v~~~DsG~ 88 (253)
T 3to4_D 10 WRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTE-LRLQVANMSQGRT 88 (253)
T ss_dssp EEEEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSC-CEEEEESCSSCEE
T ss_pred eEEEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCe-EEEccCChhhCeE
Confidence 35678899999999988888889999872 111 1 00 11 44444333333 9999999999999
Q ss_pred EEEEEecCCc------eeEEEEEEEecC-----CCCeecc-Ccce---eCCCeeEEEEEEccCCcceeEEEEEEE
Q psy12132 64 YMCQASNNLG------SSQQFIQLSGIP-----NIPVFQK-SSRR---LGPDGYRLVWQVDTYSAIIQYLLKFRE 123 (126)
Q Consensus 64 y~C~~~~~~~------~~~~~~~l~~~~-----~~~~~~~-~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~r~ 123 (126)
|.|.+.+..+ .......+.+.. .+|.... .+.. ..++.+.|.|.+.+..|.. ..+.|.+
T Consensus 89 Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~-i~v~W~k 162 (253)
T 3to4_D 89 LYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDH-VELSWWV 162 (253)
T ss_dssp EEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSC-EEEEEEE
T ss_pred EEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceEEEEEEceEECCc-EEEEEEE
Confidence 9999986532 111122333321 2332221 1111 1246899999997743322 2344544
No 337
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.28 E-value=5.2e-11 Score=68.46 Aligned_cols=70 Identities=11% Similarity=0.113 Sum_probs=48.1
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCC-cEEEEe-cCCeEEEEEecCCCCCCEEEEEEEecCCc
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGG-RIDMHV-SSEKHSLLVRHIKDTDFGNYMCQASNNLG 73 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~-~~~~~~-~~~~~~l~i~~~~~~d~g~y~C~~~~~~~ 73 (126)
..+.+|+++.|.|.+.+. .+.+.|++++..+.... .+.... .+....|.|.++...|.|.|+|.+.|..+
T Consensus 110 ~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 181 (198)
T 1ugn_A 110 PVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQCLNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDSNS 181 (198)
T ss_dssp SEEETTCCEEEEEECSSC-CSEEEEEEC------CEEEC------CCEEEEEECCCCTTSCEEEEEEEECTTS
T ss_pred cccCCCCcEEEEEecCCC-CcEEEEEECCCccCCccccccccCCCcceeEEEecccCcccCeEEEEEEEeCCC
Confidence 356789999999999877 78999999987654221 111111 12245899999999999999999998754
No 338
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=99.28 E-value=2.9e-11 Score=64.50 Aligned_cols=82 Identities=24% Similarity=0.437 Sum_probs=58.8
Q ss_pred eeccCCccEEEEEEeeecCC----CeeEEEECC-------EEec--------------cCCcEEEEec---CCeEEEEEe
Q psy12132 3 SITAPDMRAEIICNVYANPP----AKVEWFRDG-------TAIT--------------LGGRIDMHVS---SEKHSLLVR 54 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~----~~~~w~~~~-------~~~~--------------~~~~~~~~~~---~~~~~l~i~ 54 (126)
+.+.+|+++.|.|.+.+.+. +.+.|++++ ..+. ...++.+... .....|.|.
T Consensus 15 v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~ 94 (126)
T 1eaj_A 15 IEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVT 94 (126)
T ss_dssp EEEETTSCEEECCBEECCTTCCSCEEEEEEEEETTSSCCSEEEEEEETTEEECTTSSTTTTTEEECCSCGGGTBCCEEEC
T ss_pred EEEEeCCCEEEEEEEecCCCCCCceEEEEEEeCCCcCCCceEEEEEeCCeeccccCccccCeeEEEcccccCCeEEEEEC
Confidence 56788999999999986654 349999853 2221 1134444322 123579999
Q ss_pred cCCCCCCEEEEEEEecCCceeEEEEEEEec
Q psy12132 55 HIKDTDFGNYMCQASNNLGSSQQFIQLSGI 84 (126)
Q Consensus 55 ~~~~~d~g~y~C~~~~~~~~~~~~~~l~~~ 84 (126)
+++..|.|.|.|.+.+..+.....+.|.|.
T Consensus 95 ~v~~~D~G~Y~C~v~~~~~~~~~~~~L~V~ 124 (126)
T 1eaj_A 95 NLQLSDIGTYQCKVKKAPGVANKKIHLVVL 124 (126)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred cCChHHCeEEEEEEEcCCccCCcEEEEEEE
Confidence 999999999999999987777777777654
No 339
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.28 E-value=6.1e-12 Score=72.92 Aligned_cols=73 Identities=16% Similarity=0.317 Sum_probs=55.1
Q ss_pred eccCCccEEEEEEeeec-CCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecC-CceeEEEEEE
Q psy12132 4 ITAPDMRAEIICNVYAN-PPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNN-LGSSQQFIQL 81 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~-p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~-~~~~~~~~~l 81 (126)
.+.+|+++.|.|.+.+. |.+.+.|++++..+... .. ...|.|.++...|.|.|+|.+.|. .+.....+.|
T Consensus 99 ~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~-----~~---~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l 170 (204)
T 3sgj_C 99 VFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYF-----HH---NSDFYIPKATLKDSGSYFCRGLVGSKNVSSETVQI 170 (204)
T ss_dssp EEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEEE-----EE---CCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEE
T ss_pred eEeCCCcEEEEEEecCCCCCceEEEEECCcEeecc-----cC---CceEEECcCCcccCEEEEEEEEeCCCceecCcEEE
Confidence 45689999999999655 55789999999875321 11 237999999999999999999994 4444556666
Q ss_pred Eec
Q psy12132 82 SGI 84 (126)
Q Consensus 82 ~~~ 84 (126)
.+.
T Consensus 171 ~V~ 173 (204)
T 3sgj_C 171 TIT 173 (204)
T ss_dssp EEE
T ss_pred EEe
Confidence 654
No 340
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=99.28 E-value=6.3e-11 Score=63.15 Aligned_cols=70 Identities=16% Similarity=0.349 Sum_probs=53.8
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECC-----EEec---------cCCcEEEEecCCeEEEEEecCCCCCCEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDG-----TAIT---------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQ 67 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~-----~~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 67 (126)
.+.+.+|+++.|.|.+.+.+.+.+.|++.. ..+. ...++..........|.|.+++..|+|.|.|.
T Consensus 12 ~v~v~~G~~vtL~C~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 91 (119)
T 2e27_L 12 SLSASLGGKVTITCKANQDIKKKIAWYQHKPGKGPRLLIYYTSTLKSGISSRFSGSGSGRDYSFSISNLEPEDAATYYCL 91 (119)
T ss_dssp EEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred eEEEeCCCCEEEEEEeCCCCCceEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEccCCEEEEEECCCChHHCEEEEEE
Confidence 356889999999999988778899999842 1121 13466655445567899999999999999999
Q ss_pred EecC
Q psy12132 68 ASNN 71 (126)
Q Consensus 68 ~~~~ 71 (126)
+.+.
T Consensus 92 ~~~~ 95 (119)
T 2e27_L 92 QYDN 95 (119)
T ss_dssp ECGG
T ss_pred EccC
Confidence 8864
No 341
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.27 E-value=1.5e-11 Score=68.92 Aligned_cols=72 Identities=14% Similarity=0.318 Sum_probs=54.3
Q ss_pred eeccCCccEEEEEEee-ecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCce-eEEEEE
Q psy12132 3 SITAPDMRAEIICNVY-ANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGS-SQQFIQ 80 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~-~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~-~~~~~~ 80 (126)
..+.+|+++.|.|.+. +.|.+.+.|++++..+.... ....|.|.++...|.|.|+|.+.|..|. ....+.
T Consensus 95 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~--------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~ 166 (170)
T 3ry4_A 95 LEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFSH--------LDPTFSIPQANHSHSGDYHCTGNIGYTLFSSKPVT 166 (170)
T ss_dssp SEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEEES--------SCCEEEESSCCGGGCEEEEEEEEETTEEEECCCEE
T ss_pred ceeecCCeEEEEEECCCCCCCceEEEEECCeEccccC--------CCCeEEEEeccccCCEEEEEEEEeCcCccccccEE
Confidence 3466899999999994 45668999999987754211 1237999999999999999999998875 333444
Q ss_pred EE
Q psy12132 81 LS 82 (126)
Q Consensus 81 l~ 82 (126)
|.
T Consensus 167 l~ 168 (170)
T 3ry4_A 167 IT 168 (170)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 342
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.27 E-value=1.1e-10 Score=67.69 Aligned_cols=108 Identities=20% Similarity=0.250 Sum_probs=61.3
Q ss_pred cCCccEEEEEEeeecCC----CeeEEEECCEEeccCC--cEEEEecCCe---EEEEEecCCCCCCEEEEEEEecCCceeE
Q psy12132 6 APDMRAEIICNVYANPP----AKVEWFRDGTAITLGG--RIDMHVSSEK---HSLLVRHIKDTDFGNYMCQASNNLGSSQ 76 (126)
Q Consensus 6 ~~g~~~~l~C~~~~~p~----~~~~w~~~~~~~~~~~--~~~~~~~~~~---~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 76 (126)
..|+++.|.|.+.+.++ +.+.|++++..+.... ......++.. ..|.+......|.|.|+|.+.+..+...
T Consensus 16 ~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n~~~~~~ 95 (207)
T 1l6x_A 16 MISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAP 95 (207)
T ss_dssp CTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSC
T ss_pred ecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCceEEEEEEcCcCCcc
Confidence 68999999999988753 4899999997664321 1111112211 1222223333449999999999876542
Q ss_pred EEEEEE---ecCCCCeec-cCc--ceeCCCeeEEEEEEccCCc
Q psy12132 77 QFIQLS---GIPNIPVFQ-KSS--RRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 77 ~~~~l~---~~~~~~~~~-~~~--~~~~~~~~~l~~~~~~~~~ 113 (126)
....+. ....+|... ... ....+..+.|.|.+.+..|
T Consensus 96 ~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P 138 (207)
T 1l6x_A 96 IEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYP 138 (207)
T ss_dssp EEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBS
T ss_pred eEEEeccCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeCeEC
Confidence 222232 112233322 211 1224556999999987544
No 343
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.27 E-value=2.6e-10 Score=73.57 Aligned_cols=112 Identities=13% Similarity=0.232 Sum_probs=72.8
Q ss_pred ceeccCCccEEEEEEeeecC--CCeeEEEECC--E---Eec--------------cCCcEEEEec--CCeEEEEEecCCC
Q psy12132 2 HSITAPDMRAEIICNVYANP--PAKVEWFRDG--T---AIT--------------LGGRIDMHVS--SEKHSLLVRHIKD 58 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p--~~~~~w~~~~--~---~~~--------------~~~~~~~~~~--~~~~~l~i~~~~~ 58 (126)
++.+.+|+++.|.|.+.+.+ .+.+.|+++. . .+. ...++.+..+ .....|.|.+++.
T Consensus 10 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 89 (475)
T 1iga_A 10 AEVKKPGASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMGLSSLRP 89 (475)
T ss_pred cEEEeCCCCEEEEEEecCCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEEEECCCCh
Confidence 46788999999999998654 5689999852 1 110 1235554433 2356899999999
Q ss_pred CCCEEEEEEEecCCce------eEEEEEEEecC---CCCe-eccC-cceeCCCeeEEEEEEccCCc
Q psy12132 59 TDFGNYMCQASNNLGS------SQQFIQLSGIP---NIPV-FQKS-SRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 59 ~d~g~y~C~~~~~~~~------~~~~~~l~~~~---~~~~-~~~~-~~~~~~~~~~l~~~~~~~~~ 113 (126)
.|.|.|.|.+.+..|. ......|.+.. .+|. .... .....++.+.|.|.+.+..|
T Consensus 90 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~g~~v~L~C~~~g~~P 155 (475)
T 1iga_A 90 EDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLSLCSTQPDGNVVIACLVQGFFP 155 (475)
T ss_pred hhCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecCccccCCCCeEEEEEEEeeecC
Confidence 9999999999987541 12233444432 2232 2221 11246788999999987644
No 344
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.27 E-value=1.6e-10 Score=74.18 Aligned_cols=112 Identities=14% Similarity=0.253 Sum_probs=73.5
Q ss_pred ceeccCCccEEEEEEeeecC--CCeeEEEEC--CE---Eec--------------cCCcEEEEec--CCeEEEEEecCCC
Q psy12132 2 HSITAPDMRAEIICNVYANP--PAKVEWFRD--GT---AIT--------------LGGRIDMHVS--SEKHSLLVRHIKD 58 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p--~~~~~w~~~--~~---~~~--------------~~~~~~~~~~--~~~~~l~i~~~~~ 58 (126)
.+.+.+|+++.|.|.+.+.+ .+.+.|+++ +. .+. ...++.+..+ .....|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 88 (457)
T 1hzh_H 9 AEVKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSLRS 88 (457)
T ss_dssp CEEECTTCCEEECEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSCCG
T ss_pred ceEEcCCCCEEEEEEecCccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEEECCCCc
Confidence 45788999999999998776 678999983 21 110 1246655443 3456899999999
Q ss_pred CCCEEEEEEEecCCc------------eeEEEEEEEecC---CCCe-eccC--cceeCCCeeEEEEEEccCCc
Q psy12132 59 TDFGNYMCQASNNLG------------SSQQFIQLSGIP---NIPV-FQKS--SRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 59 ~d~g~y~C~~~~~~~------------~~~~~~~l~~~~---~~~~-~~~~--~~~~~~~~~~l~~~~~~~~~ 113 (126)
.|.|.|+|.+.+..| .......+.+.. .+|. .... .....++.+.|.|.+.+..|
T Consensus 89 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P 161 (457)
T 1hzh_H 89 ADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFP 161 (457)
T ss_dssp GGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECCCSCCCTTCCEEEEEEEESBBS
T ss_pred ccCEEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCccccccCCCcEEEEEEEeEEeC
Confidence 999999999998754 122233444432 1232 2221 12346788999999977643
No 345
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.27 E-value=4.3e-13 Score=90.47 Aligned_cols=82 Identities=24% Similarity=0.437 Sum_probs=0.0
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLS 82 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~ 82 (126)
+.+.+|+++.|.|.+.|.|.|.+.|++++..+....++.+.. ....|.|.++...|.|.|+|.+.|..|.....+.|.
T Consensus 676 ~~v~~g~~~~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~--~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~ 753 (772)
T 3v2a_R 676 QTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKD--GNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFI 753 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eEEeCCCCEEEEEEeCccCCCeEEEEECCeECcCCCCeEEcC--CCcEEEECcCCHHHCEEEEEEEEeCCcceeEEEEEE
Confidence 456779999999999999999999999998877655444332 234899999999999999999999999988888887
Q ss_pred ecCC
Q psy12132 83 GIPN 86 (126)
Q Consensus 83 ~~~~ 86 (126)
|...
T Consensus 754 V~~~ 757 (772)
T 3v2a_R 754 IEGA 757 (772)
T ss_dssp ----
T ss_pred EECC
Confidence 7543
No 346
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.27 E-value=1.6e-11 Score=69.41 Aligned_cols=73 Identities=18% Similarity=0.281 Sum_probs=54.9
Q ss_pred eccCCccEEEEEEee-ecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCce-eEEEEEE
Q psy12132 4 ITAPDMRAEIICNVY-ANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGS-SQQFIQL 81 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~-~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~-~~~~~~l 81 (126)
.+.+|+++.|.|.+. +.|.+.+.|++++..+.... ....|.|.++...|.|.|+|.+.|..+. ....+.|
T Consensus 96 ~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~--------~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l 167 (176)
T 1f2q_A 96 VVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWY--------ENHNISITNATVEDSGTYYCTGKVWQLDYESEPLNI 167 (176)
T ss_dssp EEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSCC--------CSSEEEESSCCGGGCEEEEEEEEETTEEEECCCEEE
T ss_pred eeeCCCCEEEEEEecCCCCceEEEEEECCEEEeeec--------CCCeEEECCCCcccCEEEEEEEEeCCcceEecCEEE
Confidence 456899999999994 56667999999998774221 1237999999999999999999986433 3444555
Q ss_pred Eec
Q psy12132 82 SGI 84 (126)
Q Consensus 82 ~~~ 84 (126)
.+.
T Consensus 168 ~V~ 170 (176)
T 1f2q_A 168 TVI 170 (176)
T ss_dssp EEE
T ss_pred EEe
Confidence 554
No 347
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.26 E-value=1.9e-11 Score=74.92 Aligned_cols=104 Identities=10% Similarity=0.054 Sum_probs=68.3
Q ss_pred eccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCC-----ceeEEE
Q psy12132 4 ITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNL-----GSSQQF 78 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~-----~~~~~~ 78 (126)
.+.+|+++.|.|.+.+. .+.+.|+|++..+..... .......|.|.++...|.|.|+|.+.+.. +.....
T Consensus 34 ~v~~G~~v~L~C~~~~~-~~~~~W~k~g~~~~~~~~----~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~ 108 (316)
T 3vh8_G 34 VVPRGGHVTLRCHYRHR-FNNFMLYKEDRIHIPIFH----GRIFQESFNMSPVTTAHAGNYTCRGSHPHSPTGWSAPSNP 108 (316)
T ss_dssp EEETTSCEEEEEEBTTB-CCSEEEEESSCSSSCHHH----HCCBSSCEEECSCCGGGCEEEEEEEBCSSSSSSBCCCCCC
T ss_pred ccCCCCCEEEEEEccCC-CceEEEEeCCCccceeec----CCcceEEEEECCCCcccCeEEEEEEEcCCCCcceecCCCc
Confidence 46689999999999876 788999999866432110 01122379999999999999999987531 222334
Q ss_pred EEEEe--cCCCCeeccC--cceeCCCeeEEEEEEccCC
Q psy12132 79 IQLSG--IPNIPVFQKS--SRRLGPDGYRLVWQVDTYS 112 (126)
Q Consensus 79 ~~l~~--~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~ 112 (126)
+.|.+ ...+|.+... .....++.+.|.|...+..
T Consensus 109 ~~l~V~~~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~ 146 (316)
T 3vh8_G 109 VVIMVTGNHRKPSLLAHPGPLVKSGERVILQCWSDIMF 146 (316)
T ss_dssp EEEEEECSSCCCEEEEESCSEEETTCCEEEEEEESSCC
T ss_pred EEEEEecCCCCCeEEecCCCccCCCCeEEEEEcCCCCC
Confidence 44444 2333433321 2245788999999985433
No 348
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.25 E-value=1.1e-11 Score=70.78 Aligned_cols=60 Identities=18% Similarity=0.413 Sum_probs=49.7
Q ss_pred cCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCcee
Q psy12132 6 APDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSS 75 (126)
Q Consensus 6 ~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 75 (126)
.+|+++.|.|.+ |.|.+.|+|++..+..... ....|.|.++...|.|.|+|.+.|..|..
T Consensus 120 ~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~~-------~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 120 RGDGSVLLTCGL---TDKTIKWLKDGSIISPLNA-------TKNTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp SSSCEEEEECSS---SCSCEEEEETTEECCCSSC-------CSSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred CCCCeEEEEeeC---CCCeEEEEECCEECcccCC-------CcceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 489999999988 7889999999988753321 22379999999999999999999987655
No 349
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.25 E-value=3.9e-11 Score=73.18 Aligned_cols=110 Identities=16% Similarity=0.232 Sum_probs=67.2
Q ss_pred ceeccCCccEEEEEEeeec-CCCeeEEEECCEEec-----------------cCCcEEEEec-CCeEEEEEecCCCCCCE
Q psy12132 2 HSITAPDMRAEIICNVYAN-PPAKVEWFRDGTAIT-----------------LGGRIDMHVS-SEKHSLLVRHIKDTDFG 62 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~-p~~~~~w~~~~~~~~-----------------~~~~~~~~~~-~~~~~l~i~~~~~~d~g 62 (126)
++.+..|+++.|.|.+.+. +.+.+.|+|++.... ...++.+... ....+|.|.++...|.|
T Consensus 8 ~vtv~~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G 87 (308)
T 4fom_A 8 HVTAVWGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSDSG 87 (308)
T ss_dssp SCEEETTSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGGGCE
T ss_pred EeEEEcCCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHHHCE
Confidence 3567789999999998644 345799998532110 0122222111 12357999999999999
Q ss_pred EEEEEEecC-CceeEEEEEEEecCCCCe--eccC--cceeCCCeeEEEEEEccC
Q psy12132 63 NYMCQASNN-LGSSQQFIQLSGIPNIPV--FQKS--SRRLGPDGYRLVWQVDTY 111 (126)
Q Consensus 63 ~y~C~~~~~-~~~~~~~~~l~~~~~~~~--~~~~--~~~~~~~~~~l~~~~~~~ 111 (126)
.|+|.+.+. .+.......+.+...++. .... .....+..+.|.|...+.
T Consensus 88 ~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g 141 (308)
T 4fom_A 88 KYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATG 141 (308)
T ss_dssp EEEEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEE
T ss_pred EEEEEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCC
Confidence 999999875 555555555554333322 2211 112345678899977443
No 350
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=99.25 E-value=2.7e-11 Score=64.05 Aligned_cols=84 Identities=17% Similarity=0.167 Sum_probs=57.0
Q ss_pred ceeccCCccEEEEEEeee-cCCCeeEEEECCEE--------ec---------cCCcEEEEe--cCCeEEEEEecCCCCCC
Q psy12132 2 HSITAPDMRAEIICNVYA-NPPAKVEWFRDGTA--------IT---------LGGRIDMHV--SSEKHSLLVRHIKDTDF 61 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~-~p~~~~~w~~~~~~--------~~---------~~~~~~~~~--~~~~~~l~i~~~~~~d~ 61 (126)
.+.+.+|+++.|.|.... .....+.|++.... +. ...++.+.. ......|.|.+++..|+
T Consensus 6 ~v~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~Ds 85 (116)
T 2or8_A 6 EVKGVVGHPVTLPCTYSTYRGITTTCWGRGQCPSSACQNTLIWTNGHRVTYQKSSRYNLKGHISEGDVSLTIENSVESDS 85 (116)
T ss_dssp EEEEETTSCEEECCBCCCTTCCCCEEEEESCCCSSSCTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCCGGGC
T ss_pred eEEEEeCCcEEEEEEeeCCCCCcEEEEEEECCCCCCceEEEEEeCCcccCcCCCCeEEEecCCCCCeEEEEECCCCcccC
Confidence 367889999999999864 33567999986411 11 123333321 12345799999999999
Q ss_pred EEEEEEEecCCcee--EEEEEEEecC
Q psy12132 62 GNYMCQASNNLGSS--QQFIQLSGIP 85 (126)
Q Consensus 62 g~y~C~~~~~~~~~--~~~~~l~~~~ 85 (126)
|.|.|.+.+..+.. ...+.|.|.+
T Consensus 86 G~Y~C~v~~~~~~~~~~~~~~l~V~p 111 (116)
T 2or8_A 86 GLYCCRVEIPGWFNDQKVTFSLQVKP 111 (116)
T ss_dssp EEEEEEECCSSTTCCEEEEEEEEEEC
T ss_pred EEEEEEEEcCCcccccEEEEEEEECC
Confidence 99999998765433 5666666643
No 351
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=99.25 E-value=1.3e-10 Score=61.16 Aligned_cols=69 Identities=29% Similarity=0.541 Sum_probs=52.1
Q ss_pred ceeccCCccEEEEEEeeec--CCCeeEEEEC--CE----EeccCCcEEEEe--cCCeEEEEEecCCCCCCEEEEEEEec
Q psy12132 2 HSITAPDMRAEIICNVYAN--PPAKVEWFRD--GT----AITLGGRIDMHV--SSEKHSLLVRHIKDTDFGNYMCQASN 70 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~--p~~~~~w~~~--~~----~~~~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C~~~~ 70 (126)
.+.+.+|+++.|.|.+.+. +.+.+.|+++ +. .+....++.... ......|.|.+++..|.|.|.|.+.+
T Consensus 9 ~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 87 (111)
T 2ywz_A 9 TITKETGESLTIKCVLKDHSCGLSSTTWYRTQLGSTNEKTISIGGRYDETVDKGSKSFSLRISDLRVEDSGTYKCQADY 87 (111)
T ss_dssp EEEECTTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEECCSBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred cEEEccCCCEEEEeEECCCCCCCCEEEEEEeCCCCCceEeeEeCCCEEEEEeCCCCEEEEEECCCChhcCEEEEEEEEc
Confidence 3678899999999999765 4678999984 21 233345665432 23457899999999999999999887
No 352
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.25 E-value=2e-10 Score=73.37 Aligned_cols=111 Identities=15% Similarity=0.217 Sum_probs=72.6
Q ss_pred ceeccCCccEEEEEEeeecC--CCeeEEEEC--CEEe----c-------------cCCcEEEEec--CCeEEEEEecCCC
Q psy12132 2 HSITAPDMRAEIICNVYANP--PAKVEWFRD--GTAI----T-------------LGGRIDMHVS--SEKHSLLVRHIKD 58 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p--~~~~~w~~~--~~~~----~-------------~~~~~~~~~~--~~~~~l~i~~~~~ 58 (126)
.+.+..|+++.|.|.+.+.+ .+.+.|+++ +..+ . ...++.+..+ .....|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 88 (444)
T 1igt_B 9 GGLVQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSRLKS 88 (444)
T ss_dssp CCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CeEEcCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEECCCCH
Confidence 45788999999999998764 568999984 2211 0 1246655443 2456899999999
Q ss_pred CCCEEEEEEEecCCce---eEEEEEEEecC---CCC-eeccC--cceeCCCeeEEEEEEccCC
Q psy12132 59 TDFGNYMCQASNNLGS---SQQFIQLSGIP---NIP-VFQKS--SRRLGPDGYRLVWQVDTYS 112 (126)
Q Consensus 59 ~d~g~y~C~~~~~~~~---~~~~~~l~~~~---~~~-~~~~~--~~~~~~~~~~l~~~~~~~~ 112 (126)
.|.|.|.|.+.+..+. ......|.+.. .+| .+... .....++.+.|.|.+.+..
T Consensus 89 ~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~ 151 (444)
T 1igt_B 89 EDTAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYF 151 (444)
T ss_dssp GGCEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCSSCCCSSCEEEEEEEEEEB
T ss_pred HHCEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEecccccCCCCCcEEEEEEEccee
Confidence 9999999999986543 11223444432 123 22221 1124678899999997753
No 353
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.25 E-value=1.2e-10 Score=69.06 Aligned_cols=69 Identities=23% Similarity=0.474 Sum_probs=53.7
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEE--CCEEec------------cCCcEEEEecCCeEEEEEecCCCCCCEEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFR--DGTAIT------------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQA 68 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~--~~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 68 (126)
+.+.+|+++.|.|.+.+.+.+.+.|++ ++..+. ...++..........|.|.++...|.|.|+|.+
T Consensus 145 ~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 224 (247)
T 2ghw_B 145 LSLSPGERATLSCRASQSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQ 224 (247)
T ss_dssp EEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEE
T ss_pred EEecCCCcEEEEEEeCCCccceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEE
Confidence 457789999999999999889999998 443221 124555544445568999999999999999999
Q ss_pred ecC
Q psy12132 69 SNN 71 (126)
Q Consensus 69 ~~~ 71 (126)
.+.
T Consensus 225 ~~~ 227 (247)
T 2ghw_B 225 RSN 227 (247)
T ss_dssp CSS
T ss_pred ccC
Confidence 875
No 354
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.24 E-value=9.7e-12 Score=72.08 Aligned_cols=72 Identities=13% Similarity=0.253 Sum_probs=55.2
Q ss_pred CCccEEEEEEeeecCCCeeEEEECCEEeccC--CcEEEEecCCeEEEEEecC-CCCCCEEEEEEEecCCcee-EEEEEEE
Q psy12132 7 PDMRAEIICNVYANPPAKVEWFRDGTAITLG--GRIDMHVSSEKHSLLVRHI-KDTDFGNYMCQASNNLGSS-QQFIQLS 82 (126)
Q Consensus 7 ~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~-~~~d~g~y~C~~~~~~~~~-~~~~~l~ 82 (126)
+|+++.|.|. +.|.|.+.|++++..+... .+......+ .|.|.++ +..|.|.|+|.+.|..|.. ...+.|.
T Consensus 127 ~G~~v~L~C~--g~p~p~i~W~k~~~~l~~~~~~~~~~~~~~---~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l~ 201 (204)
T 1sy6_A 127 SGTTVILTCP--QYPGSEILWQHNDKNIGGDEDDKNIGSDED---HLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLR 201 (204)
T ss_dssp ETTEEEEECS--CCCSSCEEEEETTEEESCCTTCTTEEEETT---EEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEEE
T ss_pred cCCcEEEEcC--CCCCCceEEEECCEECCCccCCceEecCCC---EEEEeeCCccccCEEEEEEeccCCCCceeEEEEEE
Confidence 7999999999 6888999999999877543 122222233 8999999 9999999999999998853 4555554
Q ss_pred e
Q psy12132 83 G 83 (126)
Q Consensus 83 ~ 83 (126)
+
T Consensus 202 ~ 202 (204)
T 1sy6_A 202 A 202 (204)
T ss_dssp E
T ss_pred E
Confidence 3
No 355
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.24 E-value=2.2e-11 Score=68.78 Aligned_cols=72 Identities=15% Similarity=0.313 Sum_probs=54.2
Q ss_pred eccCCccEEEEEEeeecCCC-eeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCce-eEEEEEE
Q psy12132 4 ITAPDMRAEIICNVYANPPA-KVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGS-SQQFIQL 81 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~p~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~-~~~~~~l 81 (126)
.+.+|+++.|.|.+.+.+++ .+.|++++..+... .. ...|.|.++...|.|.|+|.+.|..+. ....+.|
T Consensus 99 ~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~~-----~~---~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l 170 (175)
T 1fnl_A 99 VFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYF-----HH---NSDFHIPKATLKDSGSYFCRGLVGSKNVSSETVNI 170 (175)
T ss_dssp EEETTCCEEEEEEECTTCCCEEEEEEETTEEEEEE-----EE---CCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEE
T ss_pred eecCCCCEEEEEEcCCCCCceEEEEEECCeEccCC-----CC---CCEEEEcccChhhCeEEEEEEEcCCCCccCccEEE
Confidence 45689999999999877665 99999999876321 11 237999999999999999999996543 3344444
Q ss_pred Ee
Q psy12132 82 SG 83 (126)
Q Consensus 82 ~~ 83 (126)
.|
T Consensus 171 ~V 172 (175)
T 1fnl_A 171 TI 172 (175)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 356
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.24 E-value=5.4e-11 Score=69.68 Aligned_cols=82 Identities=10% Similarity=0.065 Sum_probs=53.9
Q ss_pred eeccCCccEEEEEEeee-cCCCeeEEEECCE-EeccCC-cEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEE
Q psy12132 3 SITAPDMRAEIICNVYA-NPPAKVEWFRDGT-AITLGG-RIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFI 79 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~-~p~~~~~w~~~~~-~~~~~~-~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 79 (126)
..+..|+.+.+.|.+.+ .|.|.+.|++++. .+.... ......++....+.+..++..|.|.|+|.+.|..|......
T Consensus 128 ~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~ 207 (226)
T 4f80_A 128 VKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTA 207 (226)
T ss_dssp EEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEECCCEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEE
T ss_pred eeeccCCceeeEEEeccCCCCCEEEEEECCceEcCCCceEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEE
Confidence 34567899999999987 5999999998653 333221 11112222223455566788999999999999999888888
Q ss_pred EEEec
Q psy12132 80 QLSGI 84 (126)
Q Consensus 80 ~l~~~ 84 (126)
.+.+.
T Consensus 208 ~v~v~ 212 (226)
T 4f80_A 208 SISIA 212 (226)
T ss_dssp EECCC
T ss_pred EEEEC
Confidence 87764
No 357
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.24 E-value=2.7e-10 Score=67.92 Aligned_cols=111 Identities=13% Similarity=0.142 Sum_probs=68.7
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECC--E--E-ec------------cCCcEEEEec-CCeEEEEEecCCCCCCEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDG--T--A-IT------------LGGRIDMHVS-SEKHSLLVRHIKDTDFGN 63 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~--~--~-~~------------~~~~~~~~~~-~~~~~l~i~~~~~~d~g~ 63 (126)
.+.+.+|+++.|.|.+. .+.+.+.|+++. . . +. ...++..... .....|.|.+++..|.|.
T Consensus 12 ~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D~G~ 90 (252)
T 1oga_E 12 YLFRKEGQNVTLSCEQN-LNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSAQKNPTAF 90 (252)
T ss_dssp EEEEETTCCEEECCEEC-SCCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSCCSCCCEE
T ss_pred eEEEcCCCcEEEEEEeC-CCCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECcCChhhCEE
Confidence 36788999999999985 467899999842 1 1 11 1245554321 234589999999999999
Q ss_pred EEEEEecCC---ceeEEEEEEEecC-----CCCeecc-Ccce---eCCCeeEEEEEEccCCc
Q psy12132 64 YMCQASNNL---GSSQQFIQLSGIP-----NIPVFQK-SSRR---LGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 64 y~C~~~~~~---~~~~~~~~l~~~~-----~~~~~~~-~~~~---~~~~~~~l~~~~~~~~~ 113 (126)
|.|.+.+.. ........+.+.. .+|.+.. .+.. ..++.+.|+|.+.+..|
T Consensus 91 Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P 152 (252)
T 1oga_E 91 YLCASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYP 152 (252)
T ss_dssp EEEEEESSTTSCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBS
T ss_pred EEEEEecCCccceeECCCEEEEEecccCCCCCCeEEEECCChhhhccCCceEEEEEEeeEcC
Confidence 999998751 1111112333321 2343322 1211 13678999999977533
No 358
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.24 E-value=1.7e-11 Score=73.41 Aligned_cols=90 Identities=19% Similarity=0.247 Sum_probs=61.1
Q ss_pred eeccCCccEEEEEEe---eecCCCeeEEEEC-CEEecc-----------------C----CcEEEEe--cCCeEEEEEec
Q psy12132 3 SITAPDMRAEIICNV---YANPPAKVEWFRD-GTAITL-----------------G----GRIDMHV--SSEKHSLLVRH 55 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~---~~~p~~~~~w~~~-~~~~~~-----------------~----~~~~~~~--~~~~~~l~i~~ 55 (126)
+.+.+|+++.|.|.+ .+.|.+.+.|+++ +..... . .+..+.. ......|.|.+
T Consensus 128 ~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~ 207 (268)
T 3mj6_A 128 LRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQT 207 (268)
T ss_dssp EEEETTCCEEECCBCEESSSSCCCEEEEEEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECS
T ss_pred cccccCCcEEEEEEecCCCCCCccceEEEecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECc
Confidence 467789999999999 5668899999983 211100 0 1111110 11245899999
Q ss_pred CCCCCCEEEEEEEecCCceeEEEEEEEecCCCCeecc
Q psy12132 56 IKDTDFGNYMCQASNNLGSSQQFIQLSGIPNIPVFQK 92 (126)
Q Consensus 56 ~~~~d~g~y~C~~~~~~~~~~~~~~l~~~~~~~~~~~ 92 (126)
+...|.|.|+|.+.|..|.....+.|.+...+|.+..
T Consensus 208 v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~p~~~~ 244 (268)
T 3mj6_A 208 VKESDQGIYTCSIYVGKLESRKTIVLHVVQDEFQRTI 244 (268)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEECC------
T ss_pred CChhhCeEEEEEEEcCCceEEEEEEEEEEcCCCeeee
Confidence 9999999999999999998888888888555554443
No 359
>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane, phosphorylation, immunoglobulin fold, signal; 1.90A {Rattus norvegicus} SCOP: b.1.1.1
Probab=99.24 E-value=6e-11 Score=63.37 Aligned_cols=87 Identities=14% Similarity=0.280 Sum_probs=55.4
Q ss_pred ceeccCCccEEEEEEeeec----CCCeeEEEECCE-------Eecc-------------CCcEEEEec--CCeEEEEEec
Q psy12132 2 HSITAPDMRAEIICNVYAN----PPAKVEWFRDGT-------AITL-------------GGRIDMHVS--SEKHSLLVRH 55 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~----p~~~~~w~~~~~-------~~~~-------------~~~~~~~~~--~~~~~l~i~~ 55 (126)
.+.+..|+++.|.|.+... +.+.+.|++.+. .+.. ..++.+... ..+.+|.|.+
T Consensus 8 ~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 87 (124)
T 1neu_A 8 EVYGAVGSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPSWKDGSIVIHN 87 (124)
T ss_dssp EEEEETTSCEEECCEEECSSCCCSCCEEEEEEEETTCCCCEEEEEEETTEEEECSSSTTTTCEEECCBGGGTBCCEEECS
T ss_pred eEEEEeCCeEEEEeEEeCCCCCCCceEEEEEEcCCCCCceEEEEEecCCeeccccCccccCcEEEecCCcCCeEEEEEcc
Confidence 4678899999999998643 456899987431 1100 234443311 2345899999
Q ss_pred CCCCCCEEEEEEEecCCce--eEEEEEEEecCCCC
Q psy12132 56 IKDTDFGNYMCQASNNLGS--SQQFIQLSGIPNIP 88 (126)
Q Consensus 56 ~~~~d~g~y~C~~~~~~~~--~~~~~~l~~~~~~~ 88 (126)
++..|.|.|.|.+.+..+. ....+.|.|.+.|+
T Consensus 88 v~~~D~G~Y~C~v~~~~~~~~~~~~v~L~V~~~p~ 122 (124)
T 1neu_A 88 LDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEKVP 122 (124)
T ss_dssp CCGGGCEEEEEEEEC----CCEEEEEEEEEEC---
T ss_pred CChhhCEEEEEEEEcCCCCcCcEeeEEEEEecCCC
Confidence 9999999999999987553 35666777665443
No 360
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.23 E-value=8.8e-12 Score=71.64 Aligned_cols=69 Identities=7% Similarity=-0.022 Sum_probs=43.8
Q ss_pred eccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcE-EEEe-cCCeEEEEEecCCCCCCEEEEEEEecCCc
Q psy12132 4 ITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRI-DMHV-SSEKHSLLVRHIKDTDFGNYMCQASNNLG 73 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~-~~~~-~~~~~~l~i~~~~~~d~g~y~C~~~~~~~ 73 (126)
.+.+|+++.|.|.+.+.| +.+.|+|++..+...... .... ......|.|.+++..|.|.|+|.+.|..+
T Consensus 110 ~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 110 VVTSGENVTLQCGSRLRF-DRFILTEEGDHKLSWTLDSQLTPSGQFQALFPVGPVTPSHRWMLRCYGSRRHI 180 (196)
T ss_dssp -------CEEEEEESSCC-SEEEEEEC---CCEEEEECEECTTSCEEEEEECCCCBTTBCEEEEEEEEETTE
T ss_pred cccCCCcEEEEEEcCCCC-CEEEEEccCCcccccccccccccCCCceeEEEeeecCcccCeeEEEEEEccCC
Confidence 467899999999999887 899999998765422111 1111 11235899999999999999999998653
No 361
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.23 E-value=4.8e-11 Score=71.32 Aligned_cols=70 Identities=20% Similarity=0.319 Sum_probs=54.0
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEE--CCEEec------------cCCcEEEEecCCeEEEEEecCCCCCCEEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFR--DGTAIT------------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQA 68 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~--~~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 68 (126)
+.+.+|+++.|.|.+.+.+.+.+.|++ ++..+. ...++..........|.|.+++..|.|.|.|.+
T Consensus 149 ~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 228 (257)
T 1f3r_B 149 LSASVGDRVTLSCKGSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQ 228 (257)
T ss_dssp ECCCTTCCEEEEEECSSCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEE
T ss_pred EEEcCCCCEEEEEEECCcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEE
Confidence 457789999999999988888999999 443221 124555544445568999999999999999999
Q ss_pred ecCC
Q psy12132 69 SNNL 72 (126)
Q Consensus 69 ~~~~ 72 (126)
.|..
T Consensus 229 ~n~~ 232 (257)
T 1f3r_B 229 YNNG 232 (257)
T ss_dssp ESSS
T ss_pred eCCC
Confidence 9864
No 362
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A
Probab=99.23 E-value=1.4e-10 Score=61.03 Aligned_cols=70 Identities=19% Similarity=0.412 Sum_probs=53.5
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECC-----EEec---------cCCcEEEEecCCeEEEEEecCCCCCCEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDG-----TAIT---------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQ 67 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~-----~~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 67 (126)
.+.+.+|++++|.|.+.+.+.+.+.|++.. ..+. ...++..........|.|.+++..|+|.|.|.
T Consensus 13 ~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 92 (111)
T 1i3g_L 13 FMSTSVGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISNVQSEDLADYFCQ 92 (111)
T ss_dssp EEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEE
T ss_pred EEEEcCCCCEEEEEEeCCCCCCCEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEcCCCEEEEEECCCCHHHCEEEEEE
Confidence 367889999999999987777889999853 1121 12466655444567899999999999999999
Q ss_pred EecC
Q psy12132 68 ASNN 71 (126)
Q Consensus 68 ~~~~ 71 (126)
+.+.
T Consensus 93 ~~~~ 96 (111)
T 1i3g_L 93 QYSS 96 (111)
T ss_dssp ECSS
T ss_pred EecC
Confidence 8764
No 363
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.23 E-value=1.7e-11 Score=69.55 Aligned_cols=64 Identities=9% Similarity=0.162 Sum_probs=51.0
Q ss_pred CccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEEE
Q psy12132 8 DMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLS 82 (126)
Q Consensus 8 g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~ 82 (126)
+.++.|.|.+.+.|.|.+.|++++..+....+ +.+..+...|.|.|+|.+.|..|.......|.
T Consensus 110 ~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~~-----------~~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~ 173 (176)
T 1hng_A 110 CSNATLTCEVLEGTDVELKLYQGKEHLRSLRQ-----------KTMSYQWTNLRAPFKCKAVNRVSQESEMEVVN 173 (176)
T ss_dssp TTTTEEEEECSSCSSCEEEEEETTEEEEEESS-----------SEEEEECSCCSSCEEEEEEETTEEEEEEECCC
T ss_pred CCcEEEEEEecCCCCcEEEEEECCEECCCCCc-----------EEEEEEEccCCeEEEEEEEecCCCceeccccc
Confidence 44689999999999999999999987754332 33446678999999999999998887766554
No 364
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.23 E-value=5.4e-11 Score=73.17 Aligned_cols=109 Identities=13% Similarity=0.137 Sum_probs=67.6
Q ss_pred ccCCccEEEEEEeeec-CCC---eeEEEECC-EEeccCCcEEE-EecC---CeEEEEEecCCCCCCEEEEEEEecCCcee
Q psy12132 5 TAPDMRAEIICNVYAN-PPA---KVEWFRDG-TAITLGGRIDM-HVSS---EKHSLLVRHIKDTDFGNYMCQASNNLGSS 75 (126)
Q Consensus 5 ~~~g~~~~l~C~~~~~-p~~---~~~w~~~~-~~~~~~~~~~~-~~~~---~~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 75 (126)
+.+|+++.|.|.+.+. |.+ .+.|++++ ..+........ ..++ ....|.|.++...|.|.|+|.+.|..+..
T Consensus 125 v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~~ 204 (323)
T 2wqr_A 125 LFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPR 204 (323)
T ss_dssp HHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSS
T ss_pred hccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCCCC
Confidence 5579999999999875 455 89999964 44332221111 0111 12479999999999999999999876444
Q ss_pred EEEEEEEe---cCCCCeecc---CcceeCCCeeEEEEEEccCCc
Q psy12132 76 QQFIQLSG---IPNIPVFQK---SSRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 76 ~~~~~l~~---~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~ 113 (126)
...+.+.. ...+|.+.. ......++.+.|+|.+.+..|
T Consensus 205 ~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p 248 (323)
T 2wqr_A 205 ALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLIQNFMP 248 (323)
T ss_dssp CEEEEECCCCSCCBCCEEEEEECCCCTTCTTEEEEEEEEEEEBS
T ss_pred CeeeEEEccCCCCCCCEEEEeCCChHHhcCCcEEEEEEeeeeeC
Confidence 33444432 112332221 111223788999999977433
No 365
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.22 E-value=2.8e-10 Score=67.87 Aligned_cols=112 Identities=16% Similarity=0.164 Sum_probs=68.6
Q ss_pred ceeccCCccEEEEEEeeec--CCCeeEEEECC-----EEe--------------ccCCcEEEEec--CCeEEEEEecCCC
Q psy12132 2 HSITAPDMRAEIICNVYAN--PPAKVEWFRDG-----TAI--------------TLGGRIDMHVS--SEKHSLLVRHIKD 58 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~--p~~~~~w~~~~-----~~~--------------~~~~~~~~~~~--~~~~~l~i~~~~~ 58 (126)
.+.+.+|+++.|.|.+.+. +...+.|++.. ..+ ....++.+..+ .....|.|.+++.
T Consensus 9 ~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (253)
T 3liz_H 9 GGLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSSLKS 88 (253)
T ss_dssp CCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECSCCG
T ss_pred CEEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCCCh
Confidence 4678899999999999763 35679998732 111 01245555433 2456799999999
Q ss_pred CCCEEEEEEEecCC----ceeEEEEEEEec---CCCCeec-cC--cceeCCCeeEEEEEEccCCc
Q psy12132 59 TDFGNYMCQASNNL----GSSQQFIQLSGI---PNIPVFQ-KS--SRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 59 ~d~g~y~C~~~~~~----~~~~~~~~l~~~---~~~~~~~-~~--~~~~~~~~~~l~~~~~~~~~ 113 (126)
.|.|.|.|.+.+.. ........+.+. ..+|.+. .. .....++.+.|.|.+.+..|
T Consensus 89 ~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P 153 (253)
T 3liz_H 89 EDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFP 153 (253)
T ss_dssp GGCEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEECC------CCEEEEEEEEEEEBS
T ss_pred hhCEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEecCCcccCCCCcEEEEEEEeeEeC
Confidence 99999999998752 222222334442 2333332 11 11235778999999977433
No 366
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.21 E-value=2.5e-10 Score=65.62 Aligned_cols=77 Identities=14% Similarity=0.193 Sum_probs=54.0
Q ss_pred cCCccEEEEEEee-ecCCCeeEEEECCEEeccCCcEEEE-ecCCe-EEEEEecCCCCCCEEEEEEEecCCceeEEEEEEE
Q psy12132 6 APDMRAEIICNVY-ANPPAKVEWFRDGTAITLGGRIDMH-VSSEK-HSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLS 82 (126)
Q Consensus 6 ~~g~~~~l~C~~~-~~p~~~~~w~~~~~~~~~~~~~~~~-~~~~~-~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~ 82 (126)
..|+.+.|.|.+. +.|.|.+.|++++..+......... ..+.. ....+..+...|.|.|+|.+.|..+...+.+.+.
T Consensus 119 ~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~~~ 198 (201)
T 1dr9_A 119 PTSNIRRIICSTSGGFPEPHLSWLENGEELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFNWN 198 (201)
T ss_dssp SSTTEEEEEEEEEEESSCEEEEEEESSCEECCSEEEEEECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEEEEC
T ss_pred CCCCeEEEEEecCCccCCCEEEEEECCEECccccceEEecCCCcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEEecc
Confidence 4577899999995 8999999999999877643222112 12121 2223445566899999999999988887776543
No 367
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=99.21 E-value=1.4e-10 Score=60.72 Aligned_cols=62 Identities=11% Similarity=0.250 Sum_probs=44.9
Q ss_pred eccCCccEEEEEEeeecCCC-----eeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCc
Q psy12132 4 ITAPDMRAEIICNVYANPPA-----KVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLG 73 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~p~~-----~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~ 73 (126)
.+.+|++++|.|.+.+.+.. .+.|+|++..+.. .. ....|.|..+...|.|.|.|.+.+..+
T Consensus 18 ~v~~G~~VtL~C~~~~~~~~~~~~~~~~w~k~g~~l~~-----~~---~~~~l~i~~v~~~dsG~Y~C~~~~~~~ 84 (108)
T 4hwn_A 18 EPQAGSPMTLSCQTKLPLQRSAARLLFSFYKDGRIVQS-----RG---LSSEFQIPTASEDHSGSYWCEAATEDN 84 (108)
T ss_dssp SCBTTCCEEEEEEC---------CCEEEEEETTEEEEE-----EE---SCCEEEESSCCGGGCEEEEEEEECTTS
T ss_pred cCCCCCcEEEEEcccCCCCCcCcceEEEEEECCcCccC-----CC---cccEEEeCccCcccCeEEEEEEEeCCC
Confidence 36789999999998755443 4999999987642 11 224799999999999999999998643
No 368
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.21 E-value=2.8e-12 Score=73.96 Aligned_cols=72 Identities=24% Similarity=0.540 Sum_probs=55.4
Q ss_pred eccCCccEEEEEEe-eecCCCeeEEEECCEEeccCCcE-------EEEecCCeEEEEEecCCCCCCEEEEEEEecCCcee
Q psy12132 4 ITAPDMRAEIICNV-YANPPAKVEWFRDGTAITLGGRI-------DMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSS 75 (126)
Q Consensus 4 ~~~~g~~~~l~C~~-~~~p~~~~~w~~~~~~~~~~~~~-------~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 75 (126)
.+..|+.+.|.|.+ .+.|.+.+.|++++..+...... ..........|.|.++...|.|.|+|.+.|..|..
T Consensus 118 ~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 197 (209)
T 1nbq_A 118 SATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTP 197 (209)
T ss_dssp EEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSSSCTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCC
T ss_pred ceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccceeeeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCcc
Confidence 46779999999996 88999999999998776543211 01111123479999999999999999999998876
No 369
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.20 E-value=7.4e-11 Score=72.57 Aligned_cols=105 Identities=10% Similarity=0.177 Sum_probs=65.9
Q ss_pred ccEEEEEEeeec-C-CCeeEEEECCEEeccCCcE--EEEecCC---eEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 9 MRAEIICNVYAN-P-PAKVEWFRDGTAITLGGRI--DMHVSSE---KHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 9 ~~~~l~C~~~~~-p-~~~~~w~~~~~~~~~~~~~--~~~~~~~---~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
+.+.|.|.+.+. | .+.+.|++++..+...... ....++. ...|.|......|.|.|+|.+.+..+.....+.+
T Consensus 25 ~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~ 104 (323)
T 2wqr_A 25 PTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFEDSTKK 104 (323)
T ss_dssp SEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTCCEEEEEEETTEEEEEEECC
T ss_pred CcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCCCcEEEEEEeCCCCcceeeec
Confidence 699999999886 3 4689999999887643211 1111221 1257777777779999999999987655544332
Q ss_pred Ee---cCCCCeeccCcc---eeCCCeeEEEEEEccCCc
Q psy12132 82 SG---IPNIPVFQKSSR---RLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 82 ~~---~~~~~~~~~~~~---~~~~~~~~l~~~~~~~~~ 113 (126)
.. ...++.+...+. ...++.+.|.|...+..|
T Consensus 105 ~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P 142 (323)
T 2wqr_A 105 CADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAP 142 (323)
T ss_dssp CCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECC
T ss_pred CCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCC
Confidence 11 112222222221 245788999999877544
No 370
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Probab=99.20 E-value=1.7e-10 Score=60.63 Aligned_cols=70 Identities=17% Similarity=0.361 Sum_probs=52.7
Q ss_pred ceeccCCccEEEEEEeeecC----CCeeEEEECC--E---Eec---------cCCcEEEEecCCeEEEEEecCCCCCCEE
Q psy12132 2 HSITAPDMRAEIICNVYANP----PAKVEWFRDG--T---AIT---------LGGRIDMHVSSEKHSLLVRHIKDTDFGN 63 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p----~~~~~w~~~~--~---~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 63 (126)
.+.+.+|+++.|.|.+.+.+ .+.+.|++.. . .+. ...++..........|.|.+++..|+|.
T Consensus 10 ~~~~~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG~ 89 (111)
T 1j05_L 10 SLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEADDVAT 89 (111)
T ss_dssp EEECCTTSCEEEEEEESSCCEETTEECEEEEEECTTSCEEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred EEEEeCCCCEEEEeecCCCcccCCCceEEEEEeCCCCCCEEEEEecCcCCCCCCCcEEEEccCCEEEEEECCCCcccCEE
Confidence 36788999999999998665 4679999852 1 121 1246665544556789999999999999
Q ss_pred EEEEEecC
Q psy12132 64 YMCQASNN 71 (126)
Q Consensus 64 y~C~~~~~ 71 (126)
|.|.+.+.
T Consensus 90 Y~C~~~~~ 97 (111)
T 1j05_L 90 YYCQQTNE 97 (111)
T ss_dssp EEEEECSS
T ss_pred EEEEEecC
Confidence 99998864
No 371
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.19 E-value=1.6e-10 Score=68.88 Aligned_cols=70 Identities=19% Similarity=0.353 Sum_probs=54.2
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEEC--CEEec------------cCCcEEEEecCCeEEEEEecCCCCCCEEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRD--GTAIT------------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQA 68 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~--~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 68 (126)
+.+.+|++++|.|.+.+.+.+.+.|+++ +..+. ...++.....+....|.|.+++..|.|.|.|.+
T Consensus 148 ~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 227 (256)
T 3umt_A 148 LSASLGERVSITCRASQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQ 227 (256)
T ss_dssp EEECTTCCEEEEEEESSCCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEE
T ss_pred EEEECCCCEEEEEEEecCCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEE
Confidence 5678899999999999888889999983 21111 124565555555678999999999999999999
Q ss_pred ecCC
Q psy12132 69 SNNL 72 (126)
Q Consensus 69 ~~~~ 72 (126)
.+..
T Consensus 228 ~~~~ 231 (256)
T 3umt_A 228 YASS 231 (256)
T ss_dssp CSSS
T ss_pred eeCC
Confidence 8753
No 372
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=99.19 E-value=7.8e-11 Score=61.50 Aligned_cols=81 Identities=14% Similarity=0.206 Sum_probs=54.5
Q ss_pred ceeccCCccEEEEEEeeecCCC---eeEEEECCEE--------ec---------cCCcEEEEec--CCeEEEEEecCCCC
Q psy12132 2 HSITAPDMRAEIICNVYANPPA---KVEWFRDGTA--------IT---------LGGRIDMHVS--SEKHSLLVRHIKDT 59 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~---~~~w~~~~~~--------~~---------~~~~~~~~~~--~~~~~l~i~~~~~~ 59 (126)
++.+..|+++.|.|.+.+.+.+ .+.|++.... +. ...++.+..+ .....|.|.+++..
T Consensus 3 ~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~ 82 (109)
T 2oyp_A 3 GYKVEVGKNAYLPCSYTLPTSGTLVPMCWGKGFCPWSQCTNELLRTDERNVTYQKSSRYQLKGDLNKGDVSLIIKNVTLD 82 (109)
T ss_dssp EEEECTTSCEEECCBCCCCTTCCCCCEEEESSSCCSSSCSSEEEEECSSSEEEESCTTEEECSCGGGTBCCEEECSCCGG
T ss_pred CEEEEcCCCEEEEEEeECCCCCCeEEEEEEecCCCCCCceeEEEEcCCcCccccccceEEEccCccCCcEeEEEccCCCh
Confidence 4678899999999998765433 4899985421 10 1223333221 12358999999999
Q ss_pred CCEEEEEEEecCCceeEEEEEEE
Q psy12132 60 DFGNYMCQASNNLGSSQQFIQLS 82 (126)
Q Consensus 60 d~g~y~C~~~~~~~~~~~~~~l~ 82 (126)
|.|.|.|.+.+..+.....+.|.
T Consensus 83 D~G~Y~C~v~~~~~~~~~~~~l~ 105 (109)
T 2oyp_A 83 DHGTYCCRIQFPGLMNDKKLELK 105 (109)
T ss_dssp GCEEEEEEECCSSTTCCEEEEEE
T ss_pred hCeEEEEEEEcCCcccceEEEEE
Confidence 99999999998765554444444
No 373
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.19 E-value=9.7e-10 Score=64.84 Aligned_cols=70 Identities=16% Similarity=0.310 Sum_probs=51.5
Q ss_pred ceeccCCccEEEEEEeeecC--CCeeEEEECC-----EEec---------cCCcEEEEec--CCeEEEEEecCCCCCCEE
Q psy12132 2 HSITAPDMRAEIICNVYANP--PAKVEWFRDG-----TAIT---------LGGRIDMHVS--SEKHSLLVRHIKDTDFGN 63 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p--~~~~~w~~~~-----~~~~---------~~~~~~~~~~--~~~~~l~i~~~~~~d~g~ 63 (126)
.+.+.+|+++.|.|.+.+.+ ...+.|++.. ..+. ...++....+ .....|.|.+++..|.|.
T Consensus 10 ~v~v~~G~~vtL~C~~s~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Dsg~ 89 (229)
T 1hxm_A 10 TVPVSIGVPATLRCSMKGEAIGNYYINWYRKTQGNTMTFIYREKDIYGPGFKDNFQGDIDIAKNLAVLKILAPSERDEGS 89 (229)
T ss_dssp EEEEETTCCEEEEEEECSSCGGGSEEEEEEEESSSCSEEEEETTTEECTTTTTTEEEEEEGGGTEEEEEESSCCGGGCEE
T ss_pred EEEEcCCCCEEEEeEecCCccCcceEEEEEECCCCCcEEEEEcCCccCCCcCCeEEEEEcCCCCEEEEEECcCCHhHCeE
Confidence 35678999999999997544 4679998742 1221 1356666532 345789999999999999
Q ss_pred EEEEEecC
Q psy12132 64 YMCQASNN 71 (126)
Q Consensus 64 y~C~~~~~ 71 (126)
|.|.+.+.
T Consensus 90 Y~C~~~~~ 97 (229)
T 1hxm_A 90 YYCACDTL 97 (229)
T ss_dssp EEEEEECC
T ss_pred EEEEEecC
Confidence 99998865
No 374
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.19 E-value=8.8e-11 Score=69.20 Aligned_cols=69 Identities=17% Similarity=0.287 Sum_probs=52.4
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECC-----EEe---------ccCCcEEEEe--cCCeEEEEEecCCCCCCEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDG-----TAI---------TLGGRIDMHV--SSEKHSLLVRHIKDTDFGNYMC 66 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~-----~~~---------~~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C 66 (126)
+.+.+|+++.|.|.+.+.|.+.+.|++++ ..+ ....++.... ......|.|.+++..|.|.|+|
T Consensus 137 ~~v~~G~~v~L~C~~~~~p~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 216 (238)
T 2p1y_A 137 LTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFC 216 (238)
T ss_dssp EEEETTSCEEEEEECCCTTCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEE
T ss_pred EEEeCCCeEEEEEEEecCCCCcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEE
Confidence 45778999999999999999999999853 111 1124454432 2334689999999999999999
Q ss_pred EEecC
Q psy12132 67 QASNN 71 (126)
Q Consensus 67 ~~~~~ 71 (126)
.+.|.
T Consensus 217 ~a~n~ 221 (238)
T 2p1y_A 217 AAIDT 221 (238)
T ss_dssp EEEET
T ss_pred EEeeC
Confidence 99986
No 375
>3r0n_A Poliovirus receptor-related protein 2; IG-domain, cell-adhesion molecule, virus entry receptor, STR genomics, PSI-biology; 1.30A {Homo sapiens} PDB: 4dfh_A 4dfi_A
Probab=99.19 E-value=2e-10 Score=61.73 Aligned_cols=81 Identities=20% Similarity=0.344 Sum_probs=55.5
Q ss_pred ceeccCCccEEEEEEeeecCCC----eeEEEECC----------------EEecc----CCcEEEEecC-----------
Q psy12132 2 HSITAPDMRAEIICNVYANPPA----KVEWFRDG----------------TAITL----GGRIDMHVSS----------- 46 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~----~~~w~~~~----------------~~~~~----~~~~~~~~~~----------- 46 (126)
.+.+.+|+++.|.|.+...+.+ .+.|++.. ..+.. ..++.+....
T Consensus 11 ~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~g~~~~~~~ 90 (128)
T 3r0n_A 11 EVRGQLGGTVELPCHLLPPVPGLYISLVTWQRPDAPANHQNVAAFHPKMGPSFPSPKPGSERLSFVSAKQSTGQDTEAEL 90 (128)
T ss_dssp EEECCTTSCEEECCEEESCCTTCEEEEEEEECTTSCGGGCEEEEEETTTEEECCSSSSCGGGEEESSCBCCCSTTCCCBC
T ss_pred eEEEEcCCCEEEEEEeecCCCCCcEEEEEEEEeCCCCCCeeEEEEecccCcccccccccCCcEEEeccccccccccccCC
Confidence 4677889999999999866655 78999852 11111 1244333221
Q ss_pred CeEEEEEecCCCCCCEEEEEEEec-CCceeEEEEEEE
Q psy12132 47 EKHSLLVRHIKDTDFGNYMCQASN-NLGSSQQFIQLS 82 (126)
Q Consensus 47 ~~~~l~i~~~~~~d~g~y~C~~~~-~~~~~~~~~~l~ 82 (126)
.+..|.|.+++..|.|.|.|.+.+ ..|.......|.
T Consensus 91 ~~~sL~I~~v~~~D~G~Y~C~v~~~~~g~~~~~~~L~ 127 (128)
T 3r0n_A 91 QDATLALHGLTVEDEGNYTCEFATFPKGSVRGMTWLR 127 (128)
T ss_dssp SBCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEE
T ss_pred CCeEEEEccCCchhCeEEEEEEEeCCCCCcccEEEEE
Confidence 145899999999999999998764 456666665554
No 376
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.19 E-value=8.3e-11 Score=67.51 Aligned_cols=69 Identities=12% Similarity=0.232 Sum_probs=51.2
Q ss_pred eccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcE-EEEecCCeEEEEEecCCCCCCEEEEEEEecCCc
Q psy12132 4 ITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRI-DMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLG 73 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~-~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~ 73 (126)
.+.+|+++.|.|.+.+ +.+.+.|++++..+...... ..........|.|.++...|.|.|+|.+.|..+
T Consensus 110 ~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 110 LVTSGKSVTLLCQSRS-PMDTFLLCKERAAHPLLCLRSEHGAQQHQAEFPMSPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp EECTTCCEEEEEEEEE-EEEEEEEEETTCCCGGGSEEEEEEEEEEEEEEEECSCCGGGCEEEEEEEECGGG
T ss_pred eecCCCeEEEEEecCC-CCCEEEEEeCCCcccceeecccccccCcceEEEeCCCcccCCCeEEEEEEcCCC
Confidence 4578999999999987 45689999998765433221 111112335899999999999999999998754
No 377
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=99.19 E-value=2.7e-10 Score=60.04 Aligned_cols=71 Identities=23% Similarity=0.441 Sum_probs=52.1
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECC--E-E--e-------ccCCcEEEEec---CCeEEEEEecCCCCCCEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDG--T-A--I-------TLGGRIDMHVS---SEKHSLLVRHIKDTDFGNYMC 66 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~--~-~--~-------~~~~~~~~~~~---~~~~~l~i~~~~~~d~g~y~C 66 (126)
.+.+.+|+++.|.|.+.+.+ +.+.|++.. . . + ....++....+ .....|.|.+++..|.|.|.|
T Consensus 10 ~~~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C 88 (113)
T 1h5b_A 10 ALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSERARYSTLHIRDAQLEDSGTYFC 88 (113)
T ss_dssp EEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCEEEEEEESSSEEEETTEEEECCSSSSSEEEEEECSCCGGGCEEEEE
T ss_pred EEEEecCCcEEEEEEECCCC-ceEEEEEECCCCCeEEEEEECCCCccCCceEEEEccCCCCEEEEEECCCChhhCEEEEE
Confidence 35678999999999998654 689999843 1 1 1 12345555432 245689999999999999999
Q ss_pred EEecCCc
Q psy12132 67 QASNNLG 73 (126)
Q Consensus 67 ~~~~~~~ 73 (126)
.+.+..+
T Consensus 89 ~~~n~~~ 95 (113)
T 1h5b_A 89 AAEASSG 95 (113)
T ss_dssp EEECSSS
T ss_pred EEecCCC
Confidence 9988653
No 378
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.19 E-value=2.8e-10 Score=68.01 Aligned_cols=69 Identities=19% Similarity=0.339 Sum_probs=53.0
Q ss_pred eeccCCccEEEEEEeeecCCC-----eeEEEE--CCEEec------------cCCcEEEEecCCeEEEEEecCCCCCCEE
Q psy12132 3 SITAPDMRAEIICNVYANPPA-----KVEWFR--DGTAIT------------LGGRIDMHVSSEKHSLLVRHIKDTDFGN 63 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~-----~~~w~~--~~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 63 (126)
+.+.+|+++.|.|.+.+.|.+ .+.|++ ++..+. ...++..........|.|.+++..|.|.
T Consensus 131 ~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~ 210 (256)
T 1nqb_A 131 LPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGV 210 (256)
T ss_dssp EEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred EEEecCCcEEEEeEecCcccccccceEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEE
Confidence 457889999999999888765 899999 454321 1245555444455689999999999999
Q ss_pred EEEEEecC
Q psy12132 64 YMCQASNN 71 (126)
Q Consensus 64 y~C~~~~~ 71 (126)
|+|.+.+.
T Consensus 211 Y~C~a~~~ 218 (256)
T 1nqb_A 211 YYCFQGSH 218 (256)
T ss_dssp EEEEECSS
T ss_pred EEEEEccC
Confidence 99999874
No 379
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=99.18 E-value=2e-10 Score=60.14 Aligned_cols=69 Identities=26% Similarity=0.504 Sum_probs=51.3
Q ss_pred ceeccCCccEEEEEEeeecC--CCeeEEEECC--E----EeccCCcEEEEe--cCCeEEEEEecCCCCCCEEEEEEEec
Q psy12132 2 HSITAPDMRAEIICNVYANP--PAKVEWFRDG--T----AITLGGRIDMHV--SSEKHSLLVRHIKDTDFGNYMCQASN 70 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p--~~~~~w~~~~--~----~~~~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C~~~~ 70 (126)
.+.+.+|+++.|.|.+.+.. .+.+.|+++. . .+....++.... ......|.|.+++..|+|.|.|.+.+
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 87 (108)
T 2coq_A 9 IATKETGESLTINCVLRDTACALDSTNWYRTKLGSTKEQTISIGGRYSETVDEGSNSASLTIRDLRVEDSGTYKCKAYR 87 (108)
T ss_dssp EEEECTTCCEEEEEEECCSSEEEEEEEEEEEETTCCCEEECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred eEEEcCCCCEEEEeEeCCCcCCCCEEEEEEcCCCCCcEEEEEeCCceEEEEcCCCCEEEEEECCCCcccCEEEEEEEEe
Confidence 35788999999999997653 4689999852 2 222345665432 23457899999999999999999876
No 380
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.18 E-value=2.8e-10 Score=68.74 Aligned_cols=81 Identities=20% Similarity=0.281 Sum_probs=59.5
Q ss_pred eccCCccEEEEEEeeecCC-CeeEEEECCEEeccCCcEEEEec--CCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEE
Q psy12132 4 ITAPDMRAEIICNVYANPP-AKVEWFRDGTAITLGGRIDMHVS--SEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQ 80 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~p~-~~~~w~~~~~~~~~~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 80 (126)
.+..|+.+.|.|.+.+.|. +.+.|++++..+........... .....|.|.++...|.|.|+|.+.|..|.....+.
T Consensus 197 ~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~ 276 (292)
T 4dkd_C 197 VRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMF 276 (292)
T ss_dssp CCCSSSCEEEEEEEEESSSCCEEECCBSSCCCCCCBEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEEEEEEE
T ss_pred eEecCCCEEEEEEecCCCCceEEEEeCCCcccccCccceeccceeeeEEEEEECccChhcCeEEEEEEecCCCCceeEEE
Confidence 3468999999999998765 46788888765543222111111 12347999999999999999999999999888888
Q ss_pred EEec
Q psy12132 81 LSGI 84 (126)
Q Consensus 81 l~~~ 84 (126)
|.|.
T Consensus 277 l~V~ 280 (292)
T 4dkd_C 277 FRVV 280 (292)
T ss_dssp ECC-
T ss_pred EEEe
Confidence 8764
No 381
>2q87_A CMRF35-H antigen; all-beta, immunoglobulin, IG-superfamily, IG-V, NKP44-like, natural killer cell IG-like receptor, inhibitory receptor; 1.70A {Homo sapiens}
Probab=99.18 E-value=3.7e-10 Score=59.22 Aligned_cols=83 Identities=13% Similarity=0.239 Sum_probs=56.6
Q ss_pred ceeccCCccEEEEEEeeecC-CCeeEEEECC--EE---ec--------cCCcEEEEe--cCCeEEEEEecCCCCCCEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANP-PAKVEWFRDG--TA---IT--------LGGRIDMHV--SSEKHSLLVRHIKDTDFGNYM 65 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p-~~~~~w~~~~--~~---~~--------~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~ 65 (126)
.+.+.+|++++|.|...+.. ...+.|++.. .. +. ...++.+.. ......|.|.+++..|+|.|.
T Consensus 5 ~v~~~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~ 84 (110)
T 2q87_A 5 TVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFLCDKIVETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYW 84 (110)
T ss_dssp EEEECTTSCEEEEEECCGGGTTSEEEEESCCSSSSCCCSEESSSTTCSEETTEEEEEEGGGTEEEEEESSCCGGGCEEEE
T ss_pred EEEEeCCCcEEEEeEecCCcCCceEEEEecCCCCCCeEEEEeCCccccccCCEEEEEcCcCCEEEEEEccCCHHHCEEEE
Confidence 36788999999999986543 3689999853 11 10 124555542 223568999999999999999
Q ss_pred EEEecCC-c---eeEEEEEEEec
Q psy12132 66 CQASNNL-G---SSQQFIQLSGI 84 (126)
Q Consensus 66 C~~~~~~-~---~~~~~~~l~~~ 84 (126)
|.+.+.. | .....+.|.+.
T Consensus 85 C~~~~~~~g~~~~~~~~v~v~V~ 107 (110)
T 2q87_A 85 CGVDTPWLQDFHDPVVEVEVSVF 107 (110)
T ss_dssp EEEECTTSCCBCCCSEEEEEEEC
T ss_pred EEEecCccCccCCccEEEEEEEe
Confidence 9998774 3 23344455543
No 382
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=99.18 E-value=9.9e-10 Score=56.76 Aligned_cols=81 Identities=16% Similarity=0.217 Sum_probs=55.7
Q ss_pred eeccCCccEEEEEEeee-cCCCeeEEEECC----EEeccC-C-cEEEEecC--CeEEEEEecCCCCCCEEEEEEEecCCc
Q psy12132 3 SITAPDMRAEIICNVYA-NPPAKVEWFRDG----TAITLG-G-RIDMHVSS--EKHSLLVRHIKDTDFGNYMCQASNNLG 73 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~-~p~~~~~w~~~~----~~~~~~-~-~~~~~~~~--~~~~l~i~~~~~~d~g~y~C~~~~~~~ 73 (126)
..+..|+.+.|.|.+.+ .+.|.++|.|.+ ..+... + +..+...+ ....|.|.++...|.|.|+|.+.+..|
T Consensus 24 ~tv~~G~~~~LeCpv~yc~~rPnVtWcK~~~~~c~~L~~~~q~~~~w~e~~n~s~fiL~f~~V~~sDsG~YrCsAn~~~g 103 (122)
T 1xau_A 24 HSAWTGELFKIECPVKYCVHRPNVTWCKHNGTIWVPLEVGPQLYTSWEENRSVPVFVLHFKPIHLSDNGSYSCSTNFNSQ 103 (122)
T ss_dssp EEECTTSCEEEEEEEECSSSCCCEEEEEECSSSEEECCCBTTEEEEEECSSSSCEEEEEETTCCGGGCEEEEEEEEETTE
T ss_pred EEEecCCeEEEEeEecCCCCCCcEEEEecCCeeccccccceeeecceeccCCceeEEEEEeeEEEcCCccEEEEeeCCCC
Confidence 35778999999999965 679999999844 222211 1 22222222 345899999999999999999999776
Q ss_pred eeE-EEEEEEe
Q psy12132 74 SSQ-QFIQLSG 83 (126)
Q Consensus 74 ~~~-~~~~l~~ 83 (126)
... +...+.|
T Consensus 104 ~ieSHs~ti~V 114 (122)
T 1xau_A 104 VINSHSVTIHV 114 (122)
T ss_dssp EEECCCEEEEE
T ss_pred ceeeeEEEEEE
Confidence 553 3333443
No 383
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=99.18 E-value=1.4e-10 Score=62.81 Aligned_cols=81 Identities=19% Similarity=0.339 Sum_probs=55.1
Q ss_pred ceeccCCccEEEEEEeee---cCCCeeEEEECCEE-----ec-----------------------cC--CcEEEEecCCe
Q psy12132 2 HSITAPDMRAEIICNVYA---NPPAKVEWFRDGTA-----IT-----------------------LG--GRIDMHVSSEK 48 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~---~p~~~~~w~~~~~~-----~~-----------------------~~--~~~~~~~~~~~ 48 (126)
.+.+..|+++.|.|.+.. .+.+.+.|++.+.. +. .. .++.+.. ...
T Consensus 13 ~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~-~~~ 91 (135)
T 1xt5_A 13 EVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVAN-LAA 91 (135)
T ss_dssp EEEEETTSCEEECCEEEEETCCSCCEEEEEEESSSSSEEEEEEEEECCCCTTCCCCTTSEEEEECGGGTTTEEESC-TTS
T ss_pred eEEEeCCCCEEEeeEeecCCCCCccEEEEEeeCCCCCceEEEEeccccccccccccccccccccChhhcCcEEEec-CCC
Confidence 356788999999999753 56778999985421 11 01 3333322 123
Q ss_pred EEEEEecCCCCCCEEEEEEEecCC-----ceeEEEEEEEe
Q psy12132 49 HSLLVRHIKDTDFGNYMCQASNNL-----GSSQQFIQLSG 83 (126)
Q Consensus 49 ~~l~i~~~~~~d~g~y~C~~~~~~-----~~~~~~~~l~~ 83 (126)
..|.|.+++..|.|.|.|.+.+.. +.....+.|.|
T Consensus 92 ~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~g~~~~~~~L~V 131 (135)
T 1xt5_A 92 PTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKV 131 (135)
T ss_dssp CCEEECSCCGGGCEEEEEEEECSSCCSGGGEEEEEEEEEE
T ss_pred CeEEECCCChhhCcEEEEEEEcCCccccccccceeEEEEE
Confidence 579999999999999999998743 33345555555
No 384
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.17 E-value=3.4e-10 Score=73.04 Aligned_cols=107 Identities=10% Similarity=0.008 Sum_probs=66.3
Q ss_pred ccCCccEEEEEEeeecCC---CeeEEEECCEEeccCC--cEEEEecC---CeEEEEEecCCCCCCEEEEEEEecCCceeE
Q psy12132 5 TAPDMRAEIICNVYANPP---AKVEWFRDGTAITLGG--RIDMHVSS---EKHSLLVRHIKDTDFGNYMCQASNNLGSSQ 76 (126)
Q Consensus 5 ~~~g~~~~l~C~~~~~p~---~~~~w~~~~~~~~~~~--~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 76 (126)
+.+|+++.|.|.+.+.++ +.+.| .++ .+.... ......++ ....|.|.++...|.|.|+|.+.|..+...
T Consensus 259 ~~~G~~v~L~C~~~g~~p~~~~~i~W-~~~-~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~~ 336 (475)
T 1iga_A 259 LLLGSEANLTCTLTGLRDASGVTFTW-TPS-SGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKTP 336 (475)
T ss_pred hccCCceEEEEEEEcccCCCceEEEE-CCC-CcCCccccCceECCCCCEEEEEEEEEchHHhccCCcEEEEEEcCCCCCc
Confidence 467999999999987754 58999 433 322111 00011011 234799999999999999999999877654
Q ss_pred EEEEEEe--cCCCCeec-cCcc---eeCCCeeEEEEEEccCCc
Q psy12132 77 QFIQLSG--IPNIPVFQ-KSSR---RLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 77 ~~~~l~~--~~~~~~~~-~~~~---~~~~~~~~l~~~~~~~~~ 113 (126)
....+.+ ...+|.+. .... ...++.+.|+|.+.+..|
T Consensus 337 ~~~~v~~~~~~~~P~v~~~~~~~~~v~~g~~~~L~C~~~g~~P 379 (475)
T 1iga_A 337 LTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSP 379 (475)
T ss_pred eEEEeecCCCCCCCeEEEECCChHHhccCCceEEEEEEeeeEC
Confidence 4334421 22334322 2221 235667999999977643
No 385
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.17 E-value=8.8e-11 Score=68.72 Aligned_cols=64 Identities=13% Similarity=0.178 Sum_probs=50.3
Q ss_pred eccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecC
Q psy12132 4 ITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNN 71 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~ 71 (126)
.+.+|++++|.|...+.+.+.+.|+|++..+... . ........|.|.++...|.|.|+|.+.+.
T Consensus 116 ~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~--~--~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 179 (218)
T 1uct_A 116 VLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQ--H--QSGEHPANFSLGPVDLNVSGIYRCYGWYN 179 (218)
T ss_dssp EECTTCCCEEEEECSSSCCSEEEEEETTCSSCCS--E--EECSSSEEEECCSCCGGGCEEEEEEEECT
T ss_pred ccCCCCCEEEEEeCCCCCCCEEEEEECCCccccc--c--cCCCccCEEEEccCCcccCEEEEEEEEcC
Confidence 4678999999997767778899999998765431 1 12233458999999999999999999875
No 386
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.15 E-value=6.9e-11 Score=70.77 Aligned_cols=99 Identities=15% Similarity=0.149 Sum_probs=66.1
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecC-CceeE---EE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNN-LGSSQ---QF 78 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~-~~~~~---~~ 78 (126)
..+.+|+.+.|.|.+. |.+.+.| ++..+.... ....|.+..+...|.|.|+|.+.+. .|... ..
T Consensus 108 ~~v~~G~~v~l~C~~~--p~~~i~W--~g~~~~~~~--------~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~ 175 (265)
T 2oz4_A 108 PEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPLG--------PRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQT 175 (265)
T ss_dssp SEEETTCEEEEEEECC--TTSEEEE--SSCSSSCCS--------SEECCEEECCGGGTTEEEEEEEEEECSSSEEEEEEE
T ss_pred ceecCCCcEEEEEEcc--CCCEEEE--CCEEccCCC--------CcEEEEEccccccCCceEEEEEEcCCCCCccccccc
Confidence 3456799999999998 8899999 766553221 2236788889999999999999753 35443 45
Q ss_pred EEEEecCCCCeecc----CcceeCCCeeEEEEEEccCCc
Q psy12132 79 IQLSGIPNIPVFQK----SSRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 79 ~~l~~~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~ 113 (126)
+.|.+...|..... ......++.+.|.|...+.++
T Consensus 176 ~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P~ 214 (265)
T 2oz4_A 176 RELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPL 214 (265)
T ss_dssp EEEEEEEEEECCGGGSCSEEEEETTCEECCCCCCEEESC
T ss_pred EEEEEEeCCccccccCCCccEEcCCCeEEEEeECccCCC
Confidence 55554322222111 112356888999998877654
No 387
>2bnu_A TCR alpha chain, T-cell receptor alpha chain C region; superagonist peptide T-cell vaccines, transmembrane, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2bnq_D 2bnr_D 2f54_D 2pyf_A* 2pye_D* 2f53_D 2p5e_D* 2p5w_D* 3mv7_D 3mv8_D 3mv9_D 3utt_D 2cdg_A
Probab=99.15 E-value=8.5e-10 Score=63.94 Aligned_cols=109 Identities=14% Similarity=0.258 Sum_probs=66.8
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECC--E---Eec---------cCCcEEEEe--cCCeEEEEEecCCCCCCEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDG--T---AIT---------LGGRIDMHV--SSEKHSLLVRHIKDTDFGNYM 65 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~--~---~~~---------~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~ 65 (126)
.+.+.+|+++.|.|.+.+.....+.|++.. . .+. ...++.... ......|.|.+++..|.|.|.
T Consensus 9 ~v~v~~G~~v~L~C~~s~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Dsg~Y~ 88 (203)
T 2bnu_A 9 ALSVPEGENLVLNCSFTDSAIYNLQWFRQDPGKGLTSLLLIQSSQREQTSGRLNASLDKSSGRSTLYIAASQPGDSATYL 88 (203)
T ss_dssp EEEEETTCCEEEEEEESCCCEEEEEEEEECTTSCEEEEEEEETTCSEEEETTEEEEEETTTTEEEEEESSCCGGGCEEEE
T ss_pred EEEEeCCCCEEEEEEECCCCcceEEEEEeCCCCCcEEEEEECCCCccccCCCeEEEEcCCCCEEEEEEeeCCcccCeEEE
Confidence 367789999999999976555689998742 1 111 124555542 234578999999999999999
Q ss_pred EEEecCC---c--e--eEEEEEEEec--CCCCeeccCcceeCCCeeEEEEEEccCC
Q psy12132 66 CQASNNL---G--S--SQQFIQLSGI--PNIPVFQKSSRRLGPDGYRLVWQVDTYS 112 (126)
Q Consensus 66 C~~~~~~---~--~--~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 112 (126)
|.+.+.. . . ....+.+... +..|....... ....+.|.|...+..
T Consensus 89 C~~~~~~~~~~~~~~g~gt~L~V~~~~~~~~P~V~~~~~--~~~~~~L~C~~~g~~ 142 (203)
T 2bnu_A 89 CAVRPTSGGSYIPTFGRGTSLIVHPYIQNPDPAVYQLRR--SKSSDKSVCLFTDFD 142 (203)
T ss_dssp EEEEECSSSTTCCEECCCEEEEEECCCSSCCCEEEEECC--SSSSSCEEEEEESCC
T ss_pred EEEEcCcCcceeeeeCCCEEEEEeCCCCCCCCeEEecCC--CCCCcEEEEEccccc
Confidence 9987631 1 1 1223333322 12222221111 223789999997753
No 388
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=99.15 E-value=3.1e-10 Score=59.10 Aligned_cols=64 Identities=14% Similarity=0.144 Sum_probs=48.4
Q ss_pred eccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecC
Q psy12132 4 ITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNN 71 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~ 71 (126)
.+.+|++++|.|.+.+. ...+.|++++..+... .....+....|.|.+++..|.|.|.|.+.+.
T Consensus 15 ~v~~G~~VtL~C~~~~~-~~~~~w~k~g~~~~~~---~~~~~~~~~~l~I~~v~~~dsG~Y~C~~~n~ 78 (105)
T 2vsd_A 15 GVSLGDTVTLRCHLPRM-AAWVQLWLNGTLRFDK---EKDKEQDAAEFSFAVTNLEDAGTYQCRYQVS 78 (105)
T ss_dssp SCCTTCEEEEEEECCSS-CEEEEEEETTEEEEEE---EECTTCSEEEEEEECCSGGGCEEEEEEEEEE
T ss_pred CcCcCCCEEEEEEcCCC-CcEEEEEECCccceee---eccCCCCEEEEEECCCCHHHCeEEEEEEEcC
Confidence 46789999999999754 4678899998754321 1112234568999999999999999998874
No 389
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.15 E-value=2.8e-11 Score=77.18 Aligned_cols=112 Identities=13% Similarity=0.230 Sum_probs=72.3
Q ss_pred ceeccCCccEEEEEEeeecC--CCeeEEEECC--EE---ec--------------cCCcEEEEec--CCeEEEEEecCCC
Q psy12132 2 HSITAPDMRAEIICNVYANP--PAKVEWFRDG--TA---IT--------------LGGRIDMHVS--SEKHSLLVRHIKD 58 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p--~~~~~w~~~~--~~---~~--------------~~~~~~~~~~--~~~~~l~i~~~~~ 58 (126)
++.+..|+++.|.|.+.+.+ .+.+.|+++. .. +. ...++.+..+ +....|.|.+++.
T Consensus 8 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 87 (434)
T 1igy_B 8 AELARPGASVKMSCKASGYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIHLSSLTS 87 (434)
T ss_dssp CCEECTBCCEEECCEECSSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEEECSBCG
T ss_pred CeEecCCCCEEEEEEccCCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEEECCCCh
Confidence 46788999999999998764 6789999852 21 10 1235554332 2345899999999
Q ss_pred CCCEEEEEEEecCCceeEEEEEEEecC---CCC-eeccC--cceeCCCeeEEEEEEccCCc
Q psy12132 59 TDFGNYMCQASNNLGSSQQFIQLSGIP---NIP-VFQKS--SRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 59 ~d~g~y~C~~~~~~~~~~~~~~l~~~~---~~~-~~~~~--~~~~~~~~~~l~~~~~~~~~ 113 (126)
.|.|.|.|.+.+..+.......|.+.. .+| ..... .....++.+.|.|...+..|
T Consensus 88 ~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P 148 (434)
T 1igy_B 88 DDSAVYYCVREGEVPYWGQGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFP 148 (434)
T ss_dssp GGCSEECCCCSSSSCCCCCCEECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEEEEEBS
T ss_pred HHCEEEEEEEEccccccCCceEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEEeeecC
Confidence 999999999988543333333444431 223 22211 12246788999999977533
No 390
>1pew_A JTO2, A lambda-6 type immunoglobulin light chain, domain; beta sheet, immune system; 1.60A {Homo sapiens} SCOP: b.1.1.1 PDB: 1cd0_A 1pw3_A 2cd0_A 2w0k_A 3b5g_A 3bdx_A* 2w0l_A
Probab=99.15 E-value=2.2e-10 Score=59.99 Aligned_cols=70 Identities=24% Similarity=0.433 Sum_probs=51.4
Q ss_pred ceeccCCccEEEEEE-eeecC-CCeeEEEECCEE---ec---------cCCcEEEE--ecCCeEEEEEecCCCCCCEEEE
Q psy12132 2 HSITAPDMRAEIICN-VYANP-PAKVEWFRDGTA---IT---------LGGRIDMH--VSSEKHSLLVRHIKDTDFGNYM 65 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~-~~~~p-~~~~~w~~~~~~---~~---------~~~~~~~~--~~~~~~~l~i~~~~~~d~g~y~ 65 (126)
.+.+.+|+++.|.|. +.+.+ .+.+.|++.... +. ...++... .......|.|.+++..|+|.|.
T Consensus 9 ~~~v~~G~~v~L~C~v~~~~~~~~~v~W~r~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~ 88 (109)
T 1pew_A 9 SVSESPGKTVTISCTRSSGNIASNYVQWYQQRSAPITVIYEDNQRPSGVPDRFAGSIDRSSNSASLTISGLKTEDEADYY 88 (109)
T ss_dssp EEEECTTSCEEEEEEESSSCGGGSCCEEEEC-CCCEEEEBTTTBCCTTCCTTEEEEEETTTTEEEEEECSCCGGGCEEEE
T ss_pred CEEEcCCCCEEEEEEeCCCCCCCccEEEEEECCCCcEEEEecCCcCCCCCCcEEEEeccCCCEEEEEECCCChhhCEEEE
Confidence 467889999999999 76554 478999986521 11 12466655 3344678999999999999999
Q ss_pred EEEecC
Q psy12132 66 CQASNN 71 (126)
Q Consensus 66 C~~~~~ 71 (126)
|.+.+.
T Consensus 89 C~~~~~ 94 (109)
T 1pew_A 89 CQSYDA 94 (109)
T ss_dssp EEEEET
T ss_pred EEEEeC
Confidence 998764
No 391
>2or7_A T-cell immunoglobulin and mucin domain- containing protein 2; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 1.50A {Mus musculus}
Probab=99.15 E-value=2.7e-10 Score=60.22 Aligned_cols=85 Identities=15% Similarity=0.062 Sum_probs=57.9
Q ss_pred ceeccCCccEEEEEEeeec--CCCeeEEEECC-------E-Eec---------cCCcEEEEe--cCCeEEEEEecCCCCC
Q psy12132 2 HSITAPDMRAEIICNVYAN--PPAKVEWFRDG-------T-AIT---------LGGRIDMHV--SSEKHSLLVRHIKDTD 60 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~--p~~~~~w~~~~-------~-~~~---------~~~~~~~~~--~~~~~~l~i~~~~~~d 60 (126)
.+.+.+|++++|.|..... ....+.|++.. . .+. ...++.+.. ...+.+|.|.+++..|
T Consensus 6 ~v~~~~G~~v~L~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~i~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~D 85 (115)
T 2or7_A 6 AVQGLAGHPVTLPCIYSTHLGGIVPMCWGLGECRHSYCIRSLIWTNGYTVTHQRNSRYQLKGNISEGNVSLTIENTVVGD 85 (115)
T ss_dssp CEEEETTSCEEECCBCCHHHHCSCCEEEEESCHHHHTTTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCCGGG
T ss_pred EEEEEcCCCEEEEEEeecCCCCCEEEEEECCCCCcCCCceEEEEeCCeEcccccCccEEEecCccCCeEEEEEccCCHHH
Confidence 4678899999999998643 34679999864 1 111 123443321 1234589999999999
Q ss_pred CEEEEEEEecCCceeEEEEEEEecCC
Q psy12132 61 FGNYMCQASNNLGSSQQFIQLSGIPN 86 (126)
Q Consensus 61 ~g~y~C~~~~~~~~~~~~~~l~~~~~ 86 (126)
+|.|.|.+..........+.|.|.+.
T Consensus 86 sG~Y~C~v~~~~~~~~~~v~L~V~~~ 111 (115)
T 2or7_A 86 GGPYCCVVEIPGAFHFVDYMLEVKPE 111 (115)
T ss_dssp CEEEEEEECCTTSCEEEEEEEEEESC
T ss_pred CEEEEEEEECCCceeEEEEEEEEcCC
Confidence 99999999876444466667776543
No 392
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.14 E-value=1.4e-09 Score=64.35 Aligned_cols=112 Identities=13% Similarity=0.154 Sum_probs=68.0
Q ss_pred ceeccCCccEEEEEEeeecC----CCeeEEEECC-----EEe---c----------------cCCcEEEEec--CCeEEE
Q psy12132 2 HSITAPDMRAEIICNVYANP----PAKVEWFRDG-----TAI---T----------------LGGRIDMHVS--SEKHSL 51 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p----~~~~~w~~~~-----~~~---~----------------~~~~~~~~~~--~~~~~l 51 (126)
.+.+.+|+++.|.|.+.+.+ ...+.|++.. ..+ . ...++.+..+ .....|
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L 88 (239)
T 3tv3_H 9 PTLVEASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKNLVFL 88 (239)
T ss_dssp CSEECTTSCEEEEEEEESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGTEEEE
T ss_pred CEEEcCCCCEEEEEEEcCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCCEEEE
Confidence 35678999999999998665 3489998732 111 1 1235554432 345689
Q ss_pred EEecCCCCCCEEEEEEEecCCc-------------eeEEEEEEEec---CCCCeec-cCc--ceeCCCeeEEEEEEccCC
Q psy12132 52 LVRHIKDTDFGNYMCQASNNLG-------------SSQQFIQLSGI---PNIPVFQ-KSS--RRLGPDGYRLVWQVDTYS 112 (126)
Q Consensus 52 ~i~~~~~~d~g~y~C~~~~~~~-------------~~~~~~~l~~~---~~~~~~~-~~~--~~~~~~~~~l~~~~~~~~ 112 (126)
.|.+++..|.|.|.|.+.+..+ .......+.+. ..+|.+. ..+ ....++.+.|.|.+.+..
T Consensus 89 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~~~~ 168 (239)
T 3tv3_H 89 KLNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYF 168 (239)
T ss_dssp EECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCCCBCCEEEEECCCCCC--TTEEEEEEEEEEEB
T ss_pred EECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccCCCcCCEEEEECCChhhccCCcEEEEEEEeeEe
Confidence 9999999999999999875421 01111233332 2233332 111 123577899999997654
Q ss_pred c
Q psy12132 113 A 113 (126)
Q Consensus 113 ~ 113 (126)
|
T Consensus 169 p 169 (239)
T 3tv3_H 169 P 169 (239)
T ss_dssp S
T ss_pred C
Confidence 3
No 393
>1eeq_A Kappa-4 immunoglobulin (light chain); protein stability, hydrogen bonds, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 PDB: 1eeu_A 1lve_A 2lve_A 3lve_A 5lve_A 4lve_A 1efq_A 1qac_A 1ek3_A 2imm_A 1mvu_A 2ap2_A 1ap2_A 3bd3_A* 3bd4_A* 3bd5_A* 2imn_A 3dus_A* 3duu_A* 3dv4_A* ...
Probab=99.14 E-value=4.9e-10 Score=59.14 Aligned_cols=70 Identities=17% Similarity=0.309 Sum_probs=52.5
Q ss_pred ceeccCCccEEEEEEeeecCC------CeeEEEECC-----EEec---------cCCcEEEEecCCeEEEEEecCCCCCC
Q psy12132 2 HSITAPDMRAEIICNVYANPP------AKVEWFRDG-----TAIT---------LGGRIDMHVSSEKHSLLVRHIKDTDF 61 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~------~~~~w~~~~-----~~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~ 61 (126)
.+.+.+|+++.|.|.+.+.+. +.+.|++.. ..+. ...++..........|.|.+++..|+
T Consensus 10 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds 89 (114)
T 1eeq_A 10 SLAVSLGERATINCKSSQSVLDSSNSKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDV 89 (114)
T ss_dssp EEEECTTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred eEEEcCCCeEEEEEEcCCCccccccCCccEEEEEECCCCCCEEEEEecCccCCCCCCCEEEeecCCEEEEEECCCCcccC
Confidence 467889999999999976652 679999842 1121 13466655445567899999999999
Q ss_pred EEEEEEEecC
Q psy12132 62 GNYMCQASNN 71 (126)
Q Consensus 62 g~y~C~~~~~ 71 (126)
|.|.|.+.+.
T Consensus 90 G~Y~C~~~~~ 99 (114)
T 1eeq_A 90 AVYYCQQYYS 99 (114)
T ss_dssp EEEEEEECSS
T ss_pred EEEEEEEeeC
Confidence 9999998764
No 394
>2yc1_B Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_B 3lh2_L 3h3p_L 3lhp_L
Probab=99.14 E-value=5.7e-10 Score=61.47 Aligned_cols=70 Identities=19% Similarity=0.385 Sum_probs=53.6
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECC-----EEec---------cCCcEEEEecCCeEEEEEecCCCCCCEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDG-----TAIT---------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQ 67 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~-----~~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 67 (126)
.+.+.+|++++|.|.+.+.+.+.+.|++.. ..+. ...++..........|.|.+++..|+|.|.|.
T Consensus 25 ~v~v~~G~sVtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~sL~I~~v~~~DsG~Y~C~ 104 (146)
T 2yc1_B 25 TLSVSPGERATLSCRASQSVRSYLAWYQQKPGQAPRLLFSDASNRATGIPARFTGSGSGTDFTLTISSLEPEDFAIYYCQ 104 (146)
T ss_dssp EEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEE
T ss_pred EEEEecCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEeCCccCCCcCCCeEEecCCCEEEEEECCCCHHHCEEEEEE
Confidence 356889999999999987777789999843 1221 12466655444567899999999999999999
Q ss_pred EecC
Q psy12132 68 ASNN 71 (126)
Q Consensus 68 ~~~~ 71 (126)
+.+.
T Consensus 105 ~~~~ 108 (146)
T 2yc1_B 105 QYRY 108 (146)
T ss_dssp ECSS
T ss_pred EecC
Confidence 8865
No 395
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.14 E-value=1.9e-10 Score=68.47 Aligned_cols=70 Identities=23% Similarity=0.434 Sum_probs=53.0
Q ss_pred eeccCCccEEEEEEeeecCCC----eeEEEEC--CEEec------------cCCcEEEEecCCeEEEEEecCCCCCCEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPA----KVEWFRD--GTAIT------------LGGRIDMHVSSEKHSLLVRHIKDTDFGNY 64 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~----~~~w~~~--~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y 64 (126)
+.+.+|+++.|.|.+.+.+.+ .+.|+++ +..+. ...++..........|.|.+++..|.|.|
T Consensus 143 ~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y 222 (253)
T 3uzq_A 143 LAVSLGQRATISCRASENVDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATY 222 (253)
T ss_dssp EEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred EEEeCCCCEEEEEEecCccccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEE
Confidence 567889999999999988776 8999984 21111 12455554455566899999999999999
Q ss_pred EEEEecCC
Q psy12132 65 MCQASNNL 72 (126)
Q Consensus 65 ~C~~~~~~ 72 (126)
.|.+.+..
T Consensus 223 ~C~~~n~~ 230 (253)
T 3uzq_A 223 FCQRSNEV 230 (253)
T ss_dssp EEEECSSS
T ss_pred EEEEccCC
Confidence 99998753
No 396
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.14 E-value=1.4e-10 Score=66.04 Aligned_cols=64 Identities=9% Similarity=0.187 Sum_probs=48.6
Q ss_pred eccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCC
Q psy12132 4 ITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNL 72 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 72 (126)
.+.+|+++.|.|.+.+. .+.+.|++++..+....... .....|.|.++...|.|.|+|.+.|..
T Consensus 104 ~v~~G~~v~l~C~~~~~-~~~~~w~k~g~~~~~~~~~~----~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 167 (184)
T 2gi7_A 104 AVSSGGDVTLQCQTRYG-FDQFALYKEGDPAPYKNPER----WYRASFPIITVTAAHSGTYRCYSFSSR 167 (184)
T ss_dssp SSCCTTCEEEEEECSSC-CCEEEEEECCCCTTSCCCCE----EEEESSSEEEETTCCSEEEEEEEECTT
T ss_pred eecCCCcEEEEEEcCCC-CcEEEEEECCCcCcceecCC----CceEEEEEccCCccCCeEEEEEEEeCC
Confidence 45679999999998754 56999999987665422211 112368899999999999999999864
No 397
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.14 E-value=1.2e-09 Score=65.16 Aligned_cols=70 Identities=14% Similarity=0.367 Sum_probs=50.1
Q ss_pred ceeccCCccEEEEEEeeec--CCCeeEEEECC--E---Ee---c-----------cCCcEEEEec--CCeEEEEEecCCC
Q psy12132 2 HSITAPDMRAEIICNVYAN--PPAKVEWFRDG--T---AI---T-----------LGGRIDMHVS--SEKHSLLVRHIKD 58 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~--p~~~~~w~~~~--~---~~---~-----------~~~~~~~~~~--~~~~~l~i~~~~~ 58 (126)
++.+.+|+++.|.|.+.+. ....+.|++.. . .+ . ...++.+..+ .....|.|.+++.
T Consensus 8 ~v~v~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 87 (248)
T 3u2s_H 8 GGVVQPGSSLRLSCAASGFDFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQMNSLRV 87 (248)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEECSCCG
T ss_pred CEEEeCCCCEEEEEEeccccCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCCCH
Confidence 4678899999999999752 34579998732 1 11 0 1245655433 3456899999999
Q ss_pred CCCEEEEEEEecC
Q psy12132 59 TDFGNYMCQASNN 71 (126)
Q Consensus 59 ~d~g~y~C~~~~~ 71 (126)
.|+|.|.|.+.+.
T Consensus 88 ~DsG~Y~C~~~~~ 100 (248)
T 3u2s_H 88 EDTATYFCVREAG 100 (248)
T ss_dssp GGCEEEEEEEEEE
T ss_pred HHCEEEEEEEeCC
Confidence 9999999998763
No 398
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.14 E-value=1.7e-10 Score=65.91 Aligned_cols=63 Identities=11% Similarity=0.237 Sum_probs=48.5
Q ss_pred eccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecC
Q psy12132 4 ITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNN 71 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~ 71 (126)
.+.+|+++.|.|.+.+ +.+.+.|+|++..+.. ..........|.|.+++..|.|.|+|.+.+.
T Consensus 109 ~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~----~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~ 171 (188)
T 1oll_A 109 EVISGEKVTFYCRLDT-ATSMFLLLKEGRSSHV----QRGYGKVQAEFPLGPVTTAHRGTYRCFGSYN 171 (188)
T ss_dssp EEETTCEEEEEEECSS-SCSEEEEEEESSSCEE----EEEECSSEEEEEEEECCGGGCEEEEEECEEE
T ss_pred ccccCCEEEEEEEcCC-CCCEEEEEECCccccc----cccCCCceeEEEECCCCcCCCcEEEEEEEcC
Confidence 4578999999999875 4678999998865432 1112234568999999999999999998874
No 399
>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein complex, hydrolase/immune system complex; 1.45A {Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N
Probab=99.13 E-value=6.9e-10 Score=58.54 Aligned_cols=69 Identities=23% Similarity=0.368 Sum_probs=51.4
Q ss_pred ceeccCCccEEEEEEeeecC--CCeeEEEECC--E----EeccCCcEEEEec--CCeEEEEEecCCCCCCEEEEEEEec
Q psy12132 2 HSITAPDMRAEIICNVYANP--PAKVEWFRDG--T----AITLGGRIDMHVS--SEKHSLLVRHIKDTDFGNYMCQASN 70 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p--~~~~~w~~~~--~----~~~~~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~~~~ 70 (126)
.+.+.+|+++.|.|.+.+.+ .+.+.|+++. . .+....++....+ .....|.|.+++..|+|.|.|.+.+
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 87 (113)
T 1sq2_N 9 SVTKETGESLTINCVLRDASYALGSTCWYRKKSGEGNEESISKGGRYVETVNSGSKSFSLRINDLTVEDGGTYRCGLGV 87 (113)
T ss_dssp EEEECTTCCEEEEEEECSCSSCCCCEEEEEEETTSCCCEECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECB
T ss_pred cEEEecCCCEEEEEEECCCcCCCCEEEEEEeCCCCCceEeEEeCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEe
Confidence 36788999999999997655 5689999852 2 1222356654422 3457899999999999999999876
No 400
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.13 E-value=1.8e-10 Score=71.43 Aligned_cols=70 Identities=14% Similarity=0.194 Sum_probs=47.6
Q ss_pred ccCCccEEEEEEeeec-CC-CeeEEEECCEEeccC-CcEEEEecC---CeEEEEEecCCCCCCEEEEEEEecCCcee
Q psy12132 5 TAPDMRAEIICNVYAN-PP-AKVEWFRDGTAITLG-GRIDMHVSS---EKHSLLVRHIKDTDFGNYMCQASNNLGSS 75 (126)
Q Consensus 5 ~~~g~~~~l~C~~~~~-p~-~~~~w~~~~~~~~~~-~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 75 (126)
+..|+.+.|.|.+.+. |. +.+.|++++..+... .......++ ....|.|..+...| |.|+|.+.|..+..
T Consensus 132 ~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~ 207 (344)
T 1za6_B 132 STSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNT 207 (344)
T ss_dssp TTSSSEEEEEEEEEEEBSSCCCEEETTTTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTE
T ss_pred ccCCCcEEEEEEEeeEECCCeEEEEecCCccCceeECCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCc
Confidence 4579999999999887 54 699999988653210 000000111 11368898888778 99999999887654
No 401
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}
Probab=99.13 E-value=4e-10 Score=60.82 Aligned_cols=73 Identities=15% Similarity=0.313 Sum_probs=52.1
Q ss_pred ceeccCCccEEEEEEeeecC-CCeeEEEEC--C---EEe-c---------cCCcEEEEe--cCCeEEEEEecCCCCCCEE
Q psy12132 2 HSITAPDMRAEIICNVYANP-PAKVEWFRD--G---TAI-T---------LGGRIDMHV--SSEKHSLLVRHIKDTDFGN 63 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p-~~~~~w~~~--~---~~~-~---------~~~~~~~~~--~~~~~~l~i~~~~~~d~g~ 63 (126)
.+.+.+|+++.|.|...+.. ...+.|++. + ..+ . ...++.... ......|.|.+++..|+|.
T Consensus 10 ~~~v~~G~~vtL~C~~s~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~~Dsg~ 89 (129)
T 3rrq_A 10 LLVVTEGDNATFTCSFSNTSESFVLNWYRMSPSNQTDKLAAFPEDRSQPGQDCRFRVTQLPNGRDFHMSVVRARRNDSGT 89 (129)
T ss_dssp EEEEETTSCEEEEEECCCCC-CEEEEEEEEESTTSCEEEEEETC--------CCEEEEECTTSSEEEEEESSCCGGGCEE
T ss_pred EEEEeCCCCEEEEeEecCCCCCcEEEEeEeCCCCCccEEEEEcCCccCCCcCCcEEEEEcCCCCEEEEEECCCChhHCEE
Confidence 36778999999999997654 457899873 2 111 1 123665552 3346789999999999999
Q ss_pred EEEEEecCCce
Q psy12132 64 YMCQASNNLGS 74 (126)
Q Consensus 64 y~C~~~~~~~~ 74 (126)
|.|.+.+..+.
T Consensus 90 Y~C~~~~~~~~ 100 (129)
T 3rrq_A 90 YLCGAISLAPK 100 (129)
T ss_dssp EEEEEEECGGG
T ss_pred EEEEEEecCCC
Confidence 99999876543
No 402
>1kgc_D T-cell receptor alpha chain; LC13 clone, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1mi5_D 3kpr_D 3kps_D 3o6f_C 3t0e_C 3pqy_D 2esv_D 3dxa_D 3dx9_A
Probab=99.12 E-value=3.6e-09 Score=61.46 Aligned_cols=109 Identities=10% Similarity=0.186 Sum_probs=66.9
Q ss_pred ceeccCCccEEEEEEeee-cCCCeeEEEECC-----EEec-------cCCcEEEEe--cCCeEEEEEecCCCCCCEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYA-NPPAKVEWFRDG-----TAIT-------LGGRIDMHV--SSEKHSLLVRHIKDTDFGNYMC 66 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~-~p~~~~~w~~~~-----~~~~-------~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C 66 (126)
.+.+.+|+++.|.|.+.+ .....+.|++.. ..+. ...++.... ......|.|.+++..|.|.|.|
T Consensus 8 ~~~v~~G~~v~L~C~~s~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~~Dsg~Y~C 87 (206)
T 1kgc_D 8 SMESNEEEPVHLPCNHSTISGTDYIHWYRQLPSQGPEYVIHGLTSNVNNRMASLAIAEDRKSSTLILHRATLRDAAVYYC 87 (206)
T ss_dssp EEEEETTSCEEEEEEESCCCTTCCEEEEEECTTSCCEEEEEESSSSEECSSEEEEECTTSSEEEEEESSCCGGGCEEEEE
T ss_pred eEEEcCCCCEEEEEEEcCCCCCccEEEEEECCCCCcEEEEEECCCCccCCCEEEEEcCCCCEEEEEECCCCcccCccEEE
Confidence 356789999999999965 334579998742 1121 134666543 2345689999999999999999
Q ss_pred EEecC---------CceeEEEEEEEecC--CCCeeccCcceeCCCeeEEEEEEccCCc
Q psy12132 67 QASNN---------LGSSQQFIQLSGIP--NIPVFQKSSRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 67 ~~~~~---------~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 113 (126)
.+.+. .|. ...+.+.... ..|...... .....+.|+|...+..|
T Consensus 88 ~~~~~~~~~~~~~~~g~-gt~L~V~~~~~~~~P~V~~~~--~~~~~v~L~C~~~g~~P 142 (206)
T 1kgc_D 88 ILPLAGGTSYGKLTFGQ-GTILTVHPNIQNPDPAVYQLR--DSKSSDKSVCLFTDFDS 142 (206)
T ss_dssp ECCCCSTTCCCCCCCCC-CEEEEEECCCSSCCCEEEECC--CCTTCCCEEEEEESCCT
T ss_pred EEecccCCCcccceECC-CEEEEEeCCCCCCCCeEEeec--CCCCCeEEEEEeeceec
Confidence 98753 111 2234443221 222222111 12237799999976543
No 403
>1ncn_A T lymphocyte activation antigen CD86; IG V, beta strands, immune system; 2.70A {Homo sapiens} SCOP: b.1.1.1 PDB: 1i85_A
Probab=99.12 E-value=1.8e-10 Score=60.37 Aligned_cols=77 Identities=17% Similarity=0.251 Sum_probs=53.0
Q ss_pred ceeccCCccEEEEEEeeecCCC-----eeEEEECCEE-e---cc------------CCcEEEEecCCeEEEEEecCCCCC
Q psy12132 2 HSITAPDMRAEIICNVYANPPA-----KVEWFRDGTA-I---TL------------GGRIDMHVSSEKHSLLVRHIKDTD 60 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~-----~~~w~~~~~~-~---~~------------~~~~~~~~~~~~~~l~i~~~~~~d 60 (126)
++.+..|+++.|.|.+.+.|.+ .+.|++++.. + .. ..+..+.. .+..|.|.+++..|
T Consensus 3 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~sL~I~~v~~~D 80 (110)
T 1ncn_A 3 KIQAYFNETADLPCQFANSQNQSLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSFDS--DSWTLRLHNLQIKD 80 (110)
T ss_dssp EEEEETTSCEEEECCCCCTTCCCGGGEEEEEEETTCCEEEEEETTEECCSSBCTTTTTSEEEET--TTTEEEECSCCGGG
T ss_pred EEEEEeCCCEEEEeEeCCCCcCCCccEEEEEEeCCCccEEEEECCcccccccCcccCCcEEEEC--CCEEEEEcCCChHH
Confidence 4678899999999998765543 3999996531 1 00 12333322 23589999999999
Q ss_pred CEEEEEEEecCCceeEEEEE
Q psy12132 61 FGNYMCQASNNLGSSQQFIQ 80 (126)
Q Consensus 61 ~g~y~C~~~~~~~~~~~~~~ 80 (126)
.|.|.|.+.+..+.....+.
T Consensus 81 ~G~Y~C~v~~~~~~~~~~~~ 100 (110)
T 1ncn_A 81 KGLYQCIIHHKKPTGMIRIH 100 (110)
T ss_dssp CEEEEEEEEEECSSSEEEEE
T ss_pred CEEEEEEEEcCCCCceEEEE
Confidence 99999999876555444333
No 404
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.12 E-value=3.6e-10 Score=66.08 Aligned_cols=68 Identities=24% Similarity=0.414 Sum_probs=49.4
Q ss_pred eccCCccE-EEEEEe-eecCCCeeEEEECCEEeccCC----cEEEEecC-----C----eEEEEEecCCCCCCEEEEEEE
Q psy12132 4 ITAPDMRA-EIICNV-YANPPAKVEWFRDGTAITLGG----RIDMHVSS-----E----KHSLLVRHIKDTDFGNYMCQA 68 (126)
Q Consensus 4 ~~~~g~~~-~l~C~~-~~~p~~~~~w~~~~~~~~~~~----~~~~~~~~-----~----~~~l~i~~~~~~d~g~y~C~~ 68 (126)
.+..|+.+ .|.|.+ .+.|.|.+.|++++..+.... ++.+.... + ...|.+.....+|.|.|+|.+
T Consensus 129 ~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a 208 (231)
T 2pet_A 129 SVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAA 208 (231)
T ss_dssp CTTCCSEEEEEEEEEEEEBSCCEEEEEETTEECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEE
T ss_pred eecCCCceEEEEEEeECcccCCEEEEEECCccCccccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEE
Confidence 35578877 999999 899999999999998876544 33332210 0 145777755556699999999
Q ss_pred ecC
Q psy12132 69 SNN 71 (126)
Q Consensus 69 ~~~ 71 (126)
.|.
T Consensus 209 ~n~ 211 (231)
T 2pet_A 209 HYS 211 (231)
T ss_dssp EEE
T ss_pred EcC
Confidence 984
No 405
>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4 protein; AB-ignar, AB-12Y-2, glycoprotein, membran protease inhibitor; 2.05A {Orectolobus maculatus} PDB: 2z8w_C 2z8v_C 1ves_A 1ver_A
Probab=99.12 E-value=1.4e-09 Score=58.50 Aligned_cols=70 Identities=27% Similarity=0.477 Sum_probs=51.8
Q ss_pred ceeccCCccEEEEEEeeec--CCCeeEEEEC--CE----EeccCCcEEEEec--CCeEEEEEecCCCCCCEEEEEEEecC
Q psy12132 2 HSITAPDMRAEIICNVYAN--PPAKVEWFRD--GT----AITLGGRIDMHVS--SEKHSLLVRHIKDTDFGNYMCQASNN 71 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~--p~~~~~w~~~--~~----~~~~~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~~~~~ 71 (126)
.+.+.+|++++|.|...+. +.+.+.|++. +. .+....++....+ .....|.|.+++..|+|.|.|.+.+.
T Consensus 9 ~v~v~~G~svtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~li~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~ 88 (126)
T 3moq_A 9 TATKETGESLTINCVLRDASFELKDTGWYRTKLGSTNEQSISIGGRYVETVNKGSKSFSLRISDLRVEDSGTYKCQAFYV 88 (126)
T ss_dssp EEEEETTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEEE
T ss_pred eEEEeCCCCEEEEEEeecCccCCceEEEEEeCCCCCceEEEEeCCcEEEEEeCCCCEEEEEECcCChHhCEEEEEEEEEc
Confidence 3567889999999999765 4568999983 21 2233456654332 24678999999999999999998764
No 406
>4gjt_B Poliovirus receptor-related protein 4; six-bladed -propeller, IGV-like fold, viral entry, MV-H, NEC BETA4/BETA5 groove; HET: NAG; 3.10A {Homo sapiens}
Probab=99.12 E-value=6.8e-10 Score=59.40 Aligned_cols=84 Identities=23% Similarity=0.358 Sum_probs=56.3
Q ss_pred ceeccCCccEEEEEEeeecCCC---eeEEEECCEE-----ec---c----------CCcEEEEe---cCCeEEEEEecCC
Q psy12132 2 HSITAPDMRAEIICNVYANPPA---KVEWFRDGTA-----IT---L----------GGRIDMHV---SSEKHSLLVRHIK 57 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~---~~~w~~~~~~-----~~---~----------~~~~~~~~---~~~~~~l~i~~~~ 57 (126)
.+.+..|+++.|.|.+.+.+.. .+.|+|.... +. . ..|+.+.. ...+.+|.|.+++
T Consensus 9 ~vtv~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~ 88 (123)
T 4gjt_B 9 VVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRNAV 88 (123)
T ss_dssp EEECCTTSEEEECCEECCCTTCCEEEEEEEECCCSSCCCEEEEECSSSCCCBCGGGTTTEECCCSSCCTTBCCEEEESCC
T ss_pred EEEEEcCCCEEEEEEEeCCccCceeEEEEEEcCCCCCcceeEEEEecCCcEeCccceeEEEEecCCCcCCEEEEEECCCC
Confidence 4678899999999998765543 5789985311 10 0 12333221 1124579999999
Q ss_pred CCCCEEEEEEEec-CCceeEEEEEEEecC
Q psy12132 58 DTDFGNYMCQASN-NLGSSQQFIQLSGIP 85 (126)
Q Consensus 58 ~~d~g~y~C~~~~-~~~~~~~~~~l~~~~ 85 (126)
..|+|.|.|.+.+ ..|.....+.|.|..
T Consensus 89 ~~DsG~Y~C~v~t~~~g~~~~~~~L~VlE 117 (123)
T 4gjt_B 89 QADEGEYECRVSTFPAGSFQARLRLRVLE 117 (123)
T ss_dssp SSSCSEEEEEEEESSSCEEEEEEEEEC--
T ss_pred hHHCEEEEEEEEECCCCeEEeEEEEEEEE
Confidence 9999999998875 566777777777653
No 407
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.12 E-value=4.8e-11 Score=72.70 Aligned_cols=116 Identities=12% Similarity=0.083 Sum_probs=47.7
Q ss_pred ccCCccEEEEEEeeecCCC---eeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCce-------
Q psy12132 5 TAPDMRAEIICNVYANPPA---KVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGS------- 74 (126)
Q Consensus 5 ~~~g~~~~l~C~~~~~p~~---~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~------- 74 (126)
+.+|+.++|.|.+.+..++ ++.|++++..+..... ........+.+.....++.+.|+|.+.+..+.
T Consensus 98 ~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~---~~~~~~~~l~~~~~~~D~g~~~~C~A~~~l~~~g~~l~~ 174 (291)
T 1mq8_A 98 QPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPA---VGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFE 174 (291)
T ss_dssp CCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEEC---CBTTEEEEEECCCSSSCSSCEEEEEEEEECGGGTSCEEE
T ss_pred ccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccC---CCCCceEEEEeeeeeccCCceEEEEEEecCCccCCcccc
Confidence 6679999999999765443 5899999977643210 01112235666666555666999999976442
Q ss_pred -eEEEEEEEecCCCCe---eccCcceeCCCeeEEEEEEccCCcceeEEEEEEE
Q psy12132 75 -SQQFIQLSGIPNIPV---FQKSSRRLGPDGYRLVWQVDTYSAIIQYLLKFRE 123 (126)
Q Consensus 75 -~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~r~ 123 (126)
......|.+...|+. ...+.....++.+.|+|...+.+|.....++|+.
T Consensus 175 ~~s~~~~L~V~~~P~~~~~~~~p~~l~eG~~v~l~C~~~g~~P~~~~~v~w~~ 227 (291)
T 1mq8_A 175 NTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLAL 227 (291)
T ss_dssp ECCCCEECBC-------------------------------------------
T ss_pred ccccceEEEEEecCCCCceecCCcCccCCCeEEEEEEcCCCCCCcccEEEEEE
Confidence 123344444323222 1111123468899999999988776555566654
No 408
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.11 E-value=4.9e-10 Score=67.82 Aligned_cols=68 Identities=22% Similarity=0.444 Sum_probs=52.9
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEE--CCEEec------------cCCcEEEEecCCeEEEEEecCCCCCCEEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFR--DGTAIT------------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQA 68 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~--~~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 68 (126)
+.+.+|+++.|.|.+.+.+ +.+.|++ ++..+. ...++..........|.|.+++..|.|.|.|.+
T Consensus 172 ~~v~~G~~v~L~C~~~~~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a 250 (282)
T 1qok_A 172 MSASPGEKVTITCSASSSV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQ 250 (282)
T ss_dssp EEECTTCCEEEEEEESSCC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred EEEcCCCcEEEEEEecCCC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEE
Confidence 4577899999999999888 8999999 443321 134555544445668999999999999999999
Q ss_pred ecC
Q psy12132 69 SNN 71 (126)
Q Consensus 69 ~~~ 71 (126)
.+.
T Consensus 251 ~~~ 253 (282)
T 1qok_A 251 RSS 253 (282)
T ss_dssp CSS
T ss_pred eeC
Confidence 874
No 409
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.11 E-value=5e-09 Score=61.60 Aligned_cols=119 Identities=14% Similarity=0.196 Sum_probs=71.8
Q ss_pred ceeccCCccEEEEEEeeec--CCCeeEEEECC-----EEe-c-------------cCCcEEEEecC--CeEEEEEecCCC
Q psy12132 2 HSITAPDMRAEIICNVYAN--PPAKVEWFRDG-----TAI-T-------------LGGRIDMHVSS--EKHSLLVRHIKD 58 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~--p~~~~~w~~~~-----~~~-~-------------~~~~~~~~~~~--~~~~l~i~~~~~ 58 (126)
.+.+.+|+++.|.|.+.+. ....+.|++.. ..+ . ...++.+..+. ....|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (230)
T 3n9g_H 9 AEVRKPGASTKVSCKASGYTFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYMELSSLRS 88 (230)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CEEEcCCCCEEEEEEeecceecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCCCh
Confidence 3668899999999999752 34579998732 111 0 12456554433 456799999999
Q ss_pred CCCEEEEEEEecCC-----c---eeEEEEEEEec---CCCCeec-cC--cceeCCCeeEEEEEEccCCcceeEEEEE
Q psy12132 59 TDFGNYMCQASNNL-----G---SSQQFIQLSGI---PNIPVFQ-KS--SRRLGPDGYRLVWQVDTYSAIIQYLLKF 121 (126)
Q Consensus 59 ~d~g~y~C~~~~~~-----~---~~~~~~~l~~~---~~~~~~~-~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 121 (126)
.|+|.|.|.+.+.. + .......+.+. ..+|.+. .. .....+..+.|.|.+.+..|. ...+.|
T Consensus 89 ~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~-~~~v~W 164 (230)
T 3n9g_H 89 EDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPE-PVTVSW 164 (230)
T ss_dssp GGCEEEEEEEECCCSSSTTCCEEEECCCEEEEECSSCCBCCEEEEECCCCCCCTTCEEEEEEEEEEEBSS-CCEEEE
T ss_pred hhCEEEEEEEccCCCCcccccccccCCCEEEEEEecCCCCCEEEecCCCccccCCCCEEEEEEEEeEECC-CEEEEE
Confidence 99999999998753 1 11122234432 1233222 11 112357789999999765442 124455
No 410
>1dlf_L Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 1wz1_L* 2dlf_L 1maj_A 1mak_A 1ktr_L 2cju_L* 2uud_K* 1dsf_L 3nn8_B 1n4x_L 1bfv_L* 1cfv_L* 2bfv_L* 1wt5_C
Probab=99.10 E-value=1.5e-09 Score=57.20 Aligned_cols=70 Identities=17% Similarity=0.345 Sum_probs=52.1
Q ss_pred ceeccCCccEEEEEEeeecC-----CCeeEEEECC--E---Eec---------cCCcEEEEecCCeEEEEEecCCCCCCE
Q psy12132 2 HSITAPDMRAEIICNVYANP-----PAKVEWFRDG--T---AIT---------LGGRIDMHVSSEKHSLLVRHIKDTDFG 62 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p-----~~~~~w~~~~--~---~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g 62 (126)
.+.+.+|++++|.|.+.+.+ .+.+.|++.. . .+. ...++..........|.|.+++..|+|
T Consensus 10 ~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG 89 (113)
T 1dlf_L 10 SLPVSLGNQASISCRSSQSLVHSNGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLG 89 (113)
T ss_dssp EEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGCE
T ss_pred EEEEcCCCCEEEEEEccccccccCCCceEEEEEECCCCCCeEEEEecCccCCCCCCCEEEEccCCEEEEEECCCChHHCE
Confidence 46788999999999997655 3679998842 1 121 124665554455678999999999999
Q ss_pred EEEEEEecC
Q psy12132 63 NYMCQASNN 71 (126)
Q Consensus 63 ~y~C~~~~~ 71 (126)
.|.|.+.+.
T Consensus 90 ~Y~C~~~~~ 98 (113)
T 1dlf_L 90 VYFCSQSTH 98 (113)
T ss_dssp EEEEEECSS
T ss_pred EEEEEEecC
Confidence 999998764
No 411
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=99.10 E-value=4.2e-10 Score=60.49 Aligned_cols=70 Identities=19% Similarity=0.365 Sum_probs=52.7
Q ss_pred ceeccCCccEEEEEEeeecC----CCeeEEEECC-----EEec---------cCCcEEEEecCCeEEEEEecCCCCCCEE
Q psy12132 2 HSITAPDMRAEIICNVYANP----PAKVEWFRDG-----TAIT---------LGGRIDMHVSSEKHSLLVRHIKDTDFGN 63 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p----~~~~~w~~~~-----~~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 63 (126)
.+.+.+|++++|.|.+.+.+ .+.+.|++.. ..+. ...++..........|.|.+++..|+|.
T Consensus 10 ~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~sL~I~~v~~~DsG~ 89 (126)
T 4ffy_L 10 SLAVSLGQRATISCRASESVDHYGNSFIYWYQQKPGQPPKLLIYLASNLESGVPARFSGSGSETDFTLTIDSVETDDAAT 89 (126)
T ss_dssp EEEEETTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred eEEEeCCCCEEEEEecCCCcccCCCceEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEecCCCEEEEEECCCCHHHCEE
Confidence 36788999999999998665 4579999842 1111 1246655545556789999999999999
Q ss_pred EEEEEecC
Q psy12132 64 YMCQASNN 71 (126)
Q Consensus 64 y~C~~~~~ 71 (126)
|.|.+.+.
T Consensus 90 Y~C~~~~~ 97 (126)
T 4ffy_L 90 YYCQQNNE 97 (126)
T ss_dssp EEEEECSS
T ss_pred EEEEEecC
Confidence 99998874
No 412
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.10 E-value=5.9e-10 Score=66.48 Aligned_cols=69 Identities=23% Similarity=0.446 Sum_probs=53.0
Q ss_pred eeccCCccEEEEEEeeecCC-CeeEEEEC--CEEec------------cCCcEEEEecCCeEEEEEecCCCCCCEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPP-AKVEWFRD--GTAIT------------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQ 67 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~-~~~~w~~~--~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 67 (126)
+.+.+|+++.|.|.+.+.+. +.+.|++. +..+. ...++.....+....|.|.+++..|.|.|.|.
T Consensus 159 ~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 238 (256)
T 3juy_B 159 LSLSPGERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQ 238 (256)
T ss_dssp EEECTTSCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEE
T ss_pred EEEeCCCCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEE
Confidence 46788999999999988776 89999982 22111 22456555555567899999999999999999
Q ss_pred EecC
Q psy12132 68 ASNN 71 (126)
Q Consensus 68 ~~~~ 71 (126)
+.+.
T Consensus 239 ~~~~ 242 (256)
T 3juy_B 239 VYGA 242 (256)
T ss_dssp ECCS
T ss_pred EeeC
Confidence 9874
No 413
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.09 E-value=3.7e-09 Score=62.19 Aligned_cols=112 Identities=13% Similarity=0.201 Sum_probs=66.5
Q ss_pred ceeccCCccEEEEEEeeecC--CCee--EEEECC-----EEe-----c-----------cCCcEEEEec--CCeEEEEEe
Q psy12132 2 HSITAPDMRAEIICNVYANP--PAKV--EWFRDG-----TAI-----T-----------LGGRIDMHVS--SEKHSLLVR 54 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p--~~~~--~w~~~~-----~~~-----~-----------~~~~~~~~~~--~~~~~l~i~ 54 (126)
.+.+.+|+++.|.|.+.+.+ ...+ .|++.. ..+ . ...++.+..+ .....|.|.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 88 (232)
T 3qhz_H 9 PALVKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVVLTMT 88 (232)
T ss_dssp CSEECTTSCEEEEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEEEEEC
T ss_pred CEEECCCCcEEEEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEEEEEC
Confidence 35678899999999997532 2445 998732 111 0 0135555433 245689999
Q ss_pred cCCCCCCEEEEEEEecCC--------ceeEEEEEEEec---CCCCeec-cCc--ceeCCCeeEEEEEEccCCc
Q psy12132 55 HIKDTDFGNYMCQASNNL--------GSSQQFIQLSGI---PNIPVFQ-KSS--RRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 55 ~~~~~d~g~y~C~~~~~~--------~~~~~~~~l~~~---~~~~~~~-~~~--~~~~~~~~~l~~~~~~~~~ 113 (126)
+++..|.|.|.|.+.+.. ........+.+. ..+|.+. ..+ ....++.+.|+|.+.+..|
T Consensus 89 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P 161 (232)
T 3qhz_H 89 NMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFP 161 (232)
T ss_dssp SCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSCCBCCEEEEECC-------CEEEEEEEEEEEBS
T ss_pred cCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCCCCCCEEEEecccccccCCCcEEEEEEEeeEeC
Confidence 999999999999998652 112222233432 2233332 211 1235778999999976544
No 414
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.09 E-value=5.5e-09 Score=62.79 Aligned_cols=119 Identities=17% Similarity=0.193 Sum_probs=69.3
Q ss_pred ceeccCCccEEEEEEeeecC--CCeeEEEECC-----EEe-------------ccCCcEEEEecC--CeEEEEEecCCCC
Q psy12132 2 HSITAPDMRAEIICNVYANP--PAKVEWFRDG-----TAI-------------TLGGRIDMHVSS--EKHSLLVRHIKDT 59 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p--~~~~~w~~~~-----~~~-------------~~~~~~~~~~~~--~~~~l~i~~~~~~ 59 (126)
.+.+.+|+++.|.|.+.+.. ...+.|++.. ..+ ....++.+..+. ....|.|.+++..
T Consensus 9 ~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 88 (263)
T 3iu4_H 9 PGLVAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKMNSLQTD 88 (263)
T ss_dssp CSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECTTSCEEECGGGTTCEEEEEEGGGTEEEEEECSCCGG
T ss_pred CEEEcCCCCEEEEEEeccccCCceEEEEEEECCCCCcEEEEEEeCCCcEeeCcccCCCEEEEecCCCCEEEEEECCCCHH
Confidence 35678999999999997533 4579998732 111 012455554322 4567999999999
Q ss_pred CCEEEEEEEecCCc--------eeEEEEEEEec---CCCCeec-cCc--ceeCCCeeEEEEEEccCCcceeEEEEE
Q psy12132 60 DFGNYMCQASNNLG--------SSQQFIQLSGI---PNIPVFQ-KSS--RRLGPDGYRLVWQVDTYSAIIQYLLKF 121 (126)
Q Consensus 60 d~g~y~C~~~~~~~--------~~~~~~~l~~~---~~~~~~~-~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~ 121 (126)
|+|.|.|.+.+..+ .......+.+. ..+|.+. ..+ ....+..+.|+|.+.+..|. ...+.|
T Consensus 89 DsG~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~~~~P~-~~~v~W 163 (263)
T 3iu4_H 89 DTAMYYCARSGVREGRAQAWFAYWGQGTLVTVSAASTKGPSVFPLAPSSKGSTSGTAALGCLVKDYFPE-PVTVSW 163 (263)
T ss_dssp GCEEEEEEEEECC---CEEEEEEECCCEEEEECSSCCBCCEEEEECCCCCC----EEEEEEEEEEEBSS-CCEEEE
T ss_pred HCEEEEEEEEeCCCCccccccceeCCceEEEEecccCCCCEEEEccCccccccCCcEEEEEEEEeEeCC-ceEEEE
Confidence 99999999886531 11111234442 2233322 111 12356789999999775442 124555
No 415
>3u6r_L Antibody 1:7 (light chain); IG-like domain, neutralizing single chain FV, immune system; 2.67A {Homo sapiens}
Probab=99.09 E-value=2.8e-09 Score=58.51 Aligned_cols=70 Identities=19% Similarity=0.419 Sum_probs=53.4
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECC-----EEec---------cCCcEEEEecCCeEEEEEecCCCCCCEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDG-----TAIT---------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQ 67 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~-----~~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 67 (126)
.+.+.+|++++|.|.+...+...+.|++.. ..+. ...++..........|.|.+++..|+|.|.|.
T Consensus 9 ~v~v~~G~~vtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~sL~I~~l~~~DsG~Y~C~ 88 (143)
T 3u6r_L 9 TLSLSPGERATLSCRASQSVNKYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISNLEPEDFAVYYCQ 88 (143)
T ss_dssp EEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred EEEEeCCCCEEEEEEECCCCceeeEEEEECCCCCCEEEEEeCCccCCCccCcEeEEccCCEEEEEEccCcccCCEEEEEE
Confidence 367789999999999987666789999842 2221 13466655455667999999999999999999
Q ss_pred EecC
Q psy12132 68 ASNN 71 (126)
Q Consensus 68 ~~~~ 71 (126)
+.+.
T Consensus 89 ~~~~ 92 (143)
T 3u6r_L 89 QRSD 92 (143)
T ss_dssp ECSS
T ss_pred EecC
Confidence 8764
No 416
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.09 E-value=6.1e-10 Score=66.39 Aligned_cols=69 Identities=16% Similarity=0.411 Sum_probs=52.3
Q ss_pred eeccCCccEEEEEEeeecCCC-eeEEEEC--CEEec------------cCCcEEEEecCCeEEEEEecCCCCCCEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPA-KVEWFRD--GTAIT------------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQ 67 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~-~~~w~~~--~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 67 (126)
+.+.+|+++.|.|.+.+.+.+ .+.|+++ +..+. ...++..........|.|.+++..|.|.|.|.
T Consensus 151 ~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 230 (257)
T 3gkz_A 151 MSASPGEKVTLTCSASSSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCH 230 (257)
T ss_dssp EEECTTCCEEEEEEESSCCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred EEEeCCCcEEEEEEEccCccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEEE
Confidence 567789999999999988777 8999983 22111 02455554444566899999999999999999
Q ss_pred EecC
Q psy12132 68 ASNN 71 (126)
Q Consensus 68 ~~~~ 71 (126)
+.+.
T Consensus 231 ~~~~ 234 (257)
T 3gkz_A 231 QWSS 234 (257)
T ss_dssp ECSS
T ss_pred EccC
Confidence 9874
No 417
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.09 E-value=1.5e-09 Score=62.24 Aligned_cols=63 Identities=16% Similarity=0.226 Sum_probs=46.4
Q ss_pred CCc-cEEEEEEeeec-CCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCC-CCEEEEEEEecCCceeEEEEE
Q psy12132 7 PDM-RAEIICNVYAN-PPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDT-DFGNYMCQASNNLGSSQQFIQ 80 (126)
Q Consensus 7 ~g~-~~~l~C~~~~~-p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~-d~g~y~C~~~~~~~~~~~~~~ 80 (126)
.|. ++.|.|.+.+. |.|.+.|++++..+.... .|.|...... |.|.|+|.+.|..|.....+.
T Consensus 122 ~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~~~~-----------~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~~~~ 187 (193)
T 2if7_A 122 NMTCELHLTCSVEDADDNVSFRWEALGNTLSSQP-----------NLTVSWDPRISSEQDYTCIAENAVSNLSFSVS 187 (193)
T ss_dssp CSSEEEEEEEEEESCCTTCEEEEEETTEEEESSS-----------EEEEEECTTTCSCCEEEEEEEETTEEEEEEEE
T ss_pred CCCceEEEEEEEecCCCceEEEEEeCCEEcCCCC-----------eEEEEeccCcCCCCcEEEEEECCCCccccccc
Confidence 354 79999999985 478999999987653222 3555444444 899999999999887765543
No 418
>2eys_A NKT15; natural killer T cell receptor, immune system; 2.21A {Homo sapiens} PDB: 2eyr_A 2eyt_A 3huj_E* 3tyf_A 3tzv_A* 3sdx_E* 2po6_C* 2cde_A 3to4_C*
Probab=99.09 E-value=4.1e-09 Score=61.41 Aligned_cols=111 Identities=14% Similarity=0.287 Sum_probs=67.9
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECC-----EEe-c--c------CCcEEEEe--cCCeEEEEEecCCCCCCEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDG-----TAI-T--L------GGRIDMHV--SSEKHSLLVRHIKDTDFGNYM 65 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~-----~~~-~--~------~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~ 65 (126)
.+.+.+|+++.|.|.+.+.....+.|++.. ..+ . . ..++.... ......|.|.+++..|.|.|.
T Consensus 12 ~~~v~~G~svtL~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~~Dsg~Y~ 91 (210)
T 2eys_A 12 SLIILEGKNCTLQCNYTVSPFSNLRWYKQDTGRGPVSLTIMTFSENTKSNGRYTATLDADTKQSSLHITASQLSDSASYI 91 (210)
T ss_dssp EEEEETTCCEEEEEEECCSSCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEESSCCGGGCEEEE
T ss_pred EEEEecCCCEEEEEEECCCCCCeEEEEEeCCCCCCEEEEEEecCCCCccCCCEEEEEcCCCCEEEEEEccCCcccCceEE
Confidence 356788999999999976666789999842 112 1 1 24555542 234568999999999999999
Q ss_pred EEEecCC---ce----eEEEEEEEec--CCCCeeccCcceeCCCeeEEEEEEccCCcc
Q psy12132 66 CQASNNL---GS----SQQFIQLSGI--PNIPVFQKSSRRLGPDGYRLVWQVDTYSAI 114 (126)
Q Consensus 66 C~~~~~~---~~----~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 114 (126)
|.+.+.. .. ....+.+... +..|....... ....+.|.|...+..|.
T Consensus 92 C~~~~~~~~~~~~~fg~gt~L~V~~~~~~~~P~V~~~~~--~~~~~tl~Cl~~gf~P~ 147 (210)
T 2eys_A 92 CVVSDRGSTLGRLYFGRGTQLTVWPDIQNPDPAVYQLRD--SKSSDKSVCLFTDFDSQ 147 (210)
T ss_dssp EEEESCSSTTCCEEECCCEEEEEECCCSSCCCEEEEECC--CSSSSCEEEEEESCCTT
T ss_pred EEEEccCCCcccceECCCEEEEEECCCCCCCCeEEecCC--CCCCceEEEEcccccCC
Confidence 9988631 11 1123333221 12222222111 12267899999776543
No 419
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.08 E-value=2.5e-09 Score=69.79 Aligned_cols=117 Identities=18% Similarity=0.147 Sum_probs=69.7
Q ss_pred ccCCccEEEEEEeeecCC--CeeEEEECCEEeccCC---cEEEEecCC---eEEEEEecCCCCCCEEEEEEEecCCceeE
Q psy12132 5 TAPDMRAEIICNVYANPP--AKVEWFRDGTAITLGG---RIDMHVSSE---KHSLLVRHIKDTDFGNYMCQASNNLGSSQ 76 (126)
Q Consensus 5 ~~~g~~~~l~C~~~~~p~--~~~~w~~~~~~~~~~~---~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 76 (126)
+..|+.+.|.|.+.+..+ ..+.|++++..+.... ......++. ...|.|......|.|.|+|.+.|..+...
T Consensus 309 ~~~g~~~~L~C~v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~~~ 388 (512)
T 1zvo_C 309 LWLRDKATFTCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLPPQ 388 (512)
T ss_pred hccCCceEEEEEEeceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCCCC
Confidence 346999999999987633 3899999998754111 011111111 23688888888899999999998766443
Q ss_pred -EEEEEEe-c--CCCCee-ccCcceeCCCeeE-EEEEEccCCcceeEEEEEEE
Q psy12132 77 -QFIQLSG-I--PNIPVF-QKSSRRLGPDGYR-LVWQVDTYSAIIQYLLKFRE 123 (126)
Q Consensus 77 -~~~~l~~-~--~~~~~~-~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~r~ 123 (126)
..+.... . ..+|.. ...+.. .++.+. |.|.+.+..|.. ..+.|.+
T Consensus 389 ~~~~~~~~~~~~~~~p~v~~~~~~~-~~~~~~~L~C~~~g~~P~~-i~v~W~k 439 (512)
T 1zvo_C 389 RLMALREPAAQAPVKLSLNLLASSD-PPEAASWLLCEVSGFSPPN-ILLMWLE 439 (512)
T ss_pred ceeEEeecCCCCCCCCEEEEEccCc-CCCCceEEEEEEeeeCCCC-cEEEEEE
Confidence 2222211 1 123332 222222 566788 999998754422 2344544
No 420
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A
Probab=99.07 E-value=4.9e-10 Score=58.71 Aligned_cols=80 Identities=14% Similarity=0.267 Sum_probs=55.4
Q ss_pred ceeccCCccEEEEEEe-eecCCCeeEEEEC-CEEec--------------cCCcEEEEecCCeEEEEEecCCCCCCEEEE
Q psy12132 2 HSITAPDMRAEIICNV-YANPPAKVEWFRD-GTAIT--------------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYM 65 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~-~~~p~~~~~w~~~-~~~~~--------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~ 65 (126)
.+.+.+|++++|.|.. .+.+.+.+.|++. +..+. ...++.+.. ....|.|.+++..|+|.|.
T Consensus 12 ~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~--~~~sL~I~~v~~~DsG~Y~ 89 (110)
T 2ptt_A 12 DINAYTGSNVTLKIHKDPLGPYRRITWLHTKNQKILEYNYNSTKTIFESEFKGRVYLEE--NNGALHISNVRKEDKGTYY 89 (110)
T ss_dssp SEEEETTSCEEECSCSSCCCSCSEEEEEESTTBEEEEEETTSCEEECSSTTTTTEEECT--TTCCEEESSCCGGGCEEEE
T ss_pred CEEEecCCcEEEeCCccCCCCcCEEEEEecCCccEEEEECCCCceeeccccCCcEEEeC--CCccEEECCCCcccCeEEE
Confidence 3678899999999998 6666779999983 22111 012444321 3457999999999999999
Q ss_pred EEEecCCceeEEEEEEEec
Q psy12132 66 CQASNNLGSSQQFIQLSGI 84 (126)
Q Consensus 66 C~~~~~~~~~~~~~~l~~~ 84 (126)
|.+.+.. .....+.|.|.
T Consensus 90 C~v~~~~-~~~~~~~L~V~ 107 (110)
T 2ptt_A 90 MRVLRET-ENELKITLEVF 107 (110)
T ss_dssp EEEESSS-BCCEEEEEEEE
T ss_pred EEEEcCC-CcEEEEEEEEE
Confidence 9998754 33445555553
No 421
>2ak4_D SB27 T cell receptor alpha chain; bulged epitopes, PMHC/TCR complex, immune system; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kxf_D 3nfj_I 3ffc_D
Probab=99.07 E-value=4.2e-09 Score=61.41 Aligned_cols=110 Identities=11% Similarity=0.173 Sum_probs=66.2
Q ss_pred ceeccCCccEEEEEEeeecCCC-eeEEEECC-----EEec----------cCCcEEEEe--cCCeEEEEEecCCCCCCEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPA-KVEWFRDG-----TAIT----------LGGRIDMHV--SSEKHSLLVRHIKDTDFGN 63 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~-~~~w~~~~-----~~~~----------~~~~~~~~~--~~~~~~l~i~~~~~~d~g~ 63 (126)
.+.+.+|+++.|.|...+.... .+.|++.. ..+. ...++.... ......|.|.+++..|.|.
T Consensus 12 ~v~v~~G~~vtL~C~~s~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~ 91 (211)
T 2ak4_D 12 EISVVEKEDVTLDCVYETRDTTYYLFWYKQPPSGELVFLIRRNSFDEQNEISGRYSWNFQKSTSSFNFTITASQVVDSAV 91 (211)
T ss_dssp EEEEETTCCEEECCEEECSCSSCEEEEEEECTTCCCEEEEEEETTSCSEEEETTEEEEEETTTTEEEEEESSCCGGGCEE
T ss_pred EEEEecCCCEEEEEEecCCcCceeEEEEEECCCCccEEEEEECCCcCccCcCCCEEEEEcCCCCEEEEEECccccccCce
Confidence 3567889999999999765444 79998742 1121 124555542 2345789999999999999
Q ss_pred EEEEEecCC--c--e--eEEEEEEEec--CCCCeeccCcceeCCCeeEEEEEEccCCc
Q psy12132 64 YMCQASNNL--G--S--SQQFIQLSGI--PNIPVFQKSSRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 64 y~C~~~~~~--~--~--~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 113 (126)
|.|.+.+.. . . ....+.+... +..|....... ....+.|.|...+..|
T Consensus 92 Y~C~~~~~~~~~~~~~g~gt~L~V~~~~~~~~P~V~~~~~--~~~~vtL~Cl~~gf~P 147 (211)
T 2ak4_D 92 YFCALSGFYNTDKLIFGTGTRLQVFPNIQNPDPAVYQLRD--SKSSDKSVCLFTDFDS 147 (211)
T ss_dssp EEEEEECSBTTSCCEECCCEEEEEECCCSSCCCEEEEEBC--CSSSCCEEEEEESCCT
T ss_pred EEEEEEcCCCcceeeECCCEEEEEeCcCCCCCCEEEEccC--CCCceEEEEEeeeecC
Confidence 999987631 0 1 1123333322 12222221111 2236799999977543
No 422
>2d9c_A Signal-regulatory protein beta-1; beta-sandwich, SIRP-beta-1, CD172B antigen, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.07 E-value=1.7e-09 Score=58.77 Aligned_cols=71 Identities=21% Similarity=0.339 Sum_probs=49.2
Q ss_pred ceeccCCccEEEEEEeeec-CCCeeEEEECCE----EeccC-----CcEEEEe-----cCCeEEEEEecCCCCCCEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYAN-PPAKVEWFRDGT----AITLG-----GRIDMHV-----SSEKHSLLVRHIKDTDFGNYMC 66 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~-p~~~~~w~~~~~----~~~~~-----~~~~~~~-----~~~~~~l~i~~~~~~d~g~y~C 66 (126)
.+.+.+|++++|.|.+.+. +.+.+.|+++.. .+... .++.... ......|.|.+++..|.|.|.|
T Consensus 17 ~~~v~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C 96 (136)
T 2d9c_A 17 SVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYC 96 (136)
T ss_dssp EEEEETTSCEEECCEESCCCSCCCCEEEETTTSSCEEEEESSSCCCSSBCCSSCSSSSSCCBCCEEESSCCTTTCEEEEE
T ss_pred EEEEcCCCCEEEEEEEcCCCCCceEEEEeecCCCeEEEEEcCCCcccceeeeeeeccCCCCEEEEEECCCCHHHCEEEEE
Confidence 3677889999999999765 456899999651 12111 1222110 1124589999999999999999
Q ss_pred EEecCC
Q psy12132 67 QASNNL 72 (126)
Q Consensus 67 ~~~~~~ 72 (126)
.+.+..
T Consensus 97 ~~~~~~ 102 (136)
T 2d9c_A 97 VKFRKG 102 (136)
T ss_dssp EEEECC
T ss_pred EEEeCC
Confidence 988643
No 423
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=99.06 E-value=7.7e-09 Score=65.39 Aligned_cols=120 Identities=13% Similarity=0.104 Sum_probs=74.6
Q ss_pred ceeccCCccEEEEEEeeecC--------------CCeeEEEEC--CE--E--eccCC----------c-EEEE-------
Q psy12132 2 HSITAPDMRAEIICNVYANP--------------PAKVEWFRD--GT--A--ITLGG----------R-IDMH------- 43 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p--------------~~~~~w~~~--~~--~--~~~~~----------~-~~~~------- 43 (126)
.+.+.+|++++|.|.....+ ...+.|++. +. . +.... + ..+.
T Consensus 167 sv~a~~Ge~vtL~C~~S~~~~~~~a~~~~~~~~~~~~V~Wyrq~pg~~~~vliY~~g~~~q~~~~~~g~~~f~~~~~~~~ 246 (401)
T 3f8u_B 167 APRVRLGQDALLDLSFAYMPPTSEAASSLAPGPPPFGLEWRRQHLGKGHLLLAATPGLNGQMPAAQEGAVAFAAWDDDEP 246 (401)
T ss_dssp SCEEETTSCEEECCEEEECCCTTC------CCSCCCEEEEEEEETTEEEEEEEECTTSCCCCCCCCTTCEEEEEESCCCS
T ss_pred cEEEeCCCCEEEEEeCCCCcccccccccccccCCceEEEEEEecCCCCcEEEEEeCCCccccccccCCeEEEEeeccccc
Confidence 35678899999999986443 246899863 32 1 11111 1 1111
Q ss_pred --ecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEEEecCCCCeeccCcc---eeCCC-eeEEEEEEccCCcceeE
Q psy12132 44 --VSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLSGIPNIPVFQKSSR---RLGPD-GYRLVWQVDTYSAIIQY 117 (126)
Q Consensus 44 --~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~-~~~l~~~~~~~~~~~~~ 117 (126)
...++.+|.|.+++..|.|.|.|.+.+..+.....+.+.+...|.+...... ...++ .+.|+|.+.+..|....
T Consensus 247 ~g~~~g~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~v~L~V~~pP~V~v~p~~~~~~~~G~~~vtL~C~a~GfyP~~~~ 326 (401)
T 3f8u_B 247 WGPWTGNGTFWLPRVQPFQEGTYLATIHLPYLQGQVTLELAVYKPPKVSLMPATLARAAPGEAPPELLCLVSHFYPSGGL 326 (401)
T ss_dssp SCCEEEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCEEEEESSSCCCCCTTCCCCCEEEEEEEEBSSTTC
T ss_pred ccccCCcEEEEECcCCHhhCceEEEEEEecccceeEEEEEeeccCCeEeeccCcceeecCCCccEEEEEEecCCcCCCCc
Confidence 0123578999999999999999999988777777777776543333222111 12343 68999999877554112
Q ss_pred EEEE
Q psy12132 118 LLKF 121 (126)
Q Consensus 118 ~~~~ 121 (126)
.+.|
T Consensus 327 ~VtW 330 (401)
T 3f8u_B 327 EVEW 330 (401)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 3455
No 424
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.06 E-value=2.8e-09 Score=67.06 Aligned_cols=118 Identities=12% Similarity=0.181 Sum_probs=69.3
Q ss_pred ccCCccEEEEEEeeec-CCC---eeEEEECCEEeccCC--cEEEEecC---CeEEEEEecCCCCCCEEEEEEEecCCcee
Q psy12132 5 TAPDMRAEIICNVYAN-PPA---KVEWFRDGTAITLGG--RIDMHVSS---EKHSLLVRHIKDTDFGNYMCQASNNLGSS 75 (126)
Q Consensus 5 ~~~g~~~~l~C~~~~~-p~~---~~~w~~~~~~~~~~~--~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 75 (126)
+..|+++.|.|.+.+. |.| .+.|++++..+.... ......++ ....|.|..+...|.|.|+|.+.+..+..
T Consensus 180 ~~~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~ 259 (376)
T 2aty_A 180 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPA 259 (376)
T ss_pred eeeCCeeEEEEEEeccccCCCccEEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccCCCEEEEEEecCCCCC
Confidence 5678999999999877 323 699999875542111 00000111 23478999999999999999999876533
Q ss_pred EEEEEEEe---cCCCCeeccCcc---eeCCCeeEEEEEEccCCcceeEEEEEEE
Q psy12132 76 QQFIQLSG---IPNIPVFQKSSR---RLGPDGYRLVWQVDTYSAIIQYLLKFRE 123 (126)
Q Consensus 76 ~~~~~l~~---~~~~~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~r~ 123 (126)
.....+.. ...+|.+...+. ...++.+.|+|.+.+..|.. ..+.|.+
T Consensus 260 ~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~-i~v~W~k 312 (376)
T 2aty_A 260 PIEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPED-ITVEWQW 312 (376)
T ss_pred ceEEEEcCCCCCCcCCeEEeeCCCHHHhcCCceEEEEEEEEeECCC-cEEEEEE
Confidence 22222211 222333222111 23466799999997754421 2444544
No 425
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.06 E-value=3.8e-10 Score=65.37 Aligned_cols=73 Identities=19% Similarity=0.340 Sum_probs=51.9
Q ss_pred CCccEEEEEEeeec-CC-CeeEEEECCEEeccCCcE--EEEecC---CeEEEEEecCCCCCCEEEEEEEecCCceeEEEE
Q psy12132 7 PDMRAEIICNVYAN-PP-AKVEWFRDGTAITLGGRI--DMHVSS---EKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFI 79 (126)
Q Consensus 7 ~g~~~~l~C~~~~~-p~-~~~~w~~~~~~~~~~~~~--~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 79 (126)
.|+.+.|.|.+.+. |+ +.+.|++++..+...... ....++ ....|.|..+...|.|.|+|.+.|..+.....+
T Consensus 128 ~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 207 (213)
T 3mj8_L 128 KTNQATLVCMINGFYPADVAVTWEADGTPITQGVKTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEKSL 207 (213)
T ss_dssp TTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEEEE
T ss_pred cCCcEEEEEEeeceeCCCeEEEEEcCCcccCCCcccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEeee
Confidence 69999999999885 33 499999999887532100 000111 123588999999999999999999876555544
No 426
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.05 E-value=1.1e-09 Score=69.89 Aligned_cols=107 Identities=15% Similarity=0.119 Sum_probs=67.4
Q ss_pred ccCCccEEEEEEeeec-CCC-eeEEEECCEEeccCCcEEEEecC---CeEEEEEecCCCCCCEEEEEEEecCCceeEEEE
Q psy12132 5 TAPDMRAEIICNVYAN-PPA-KVEWFRDGTAITLGGRIDMHVSS---EKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFI 79 (126)
Q Consensus 5 ~~~g~~~~l~C~~~~~-p~~-~~~w~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 79 (126)
+.+|+.+.|.|.+.+. |.+ .+.|++++..+...........+ ....|.|..+...| |.|+|.+.|..+......
T Consensus 131 ~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~ 209 (434)
T 1igy_B 131 AQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASSTKVDK 209 (434)
T ss_dssp CCCTTEEEEEEEEEEEBSSCCEEEETTTTBCSSEEECCCEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTCCEEE
T ss_pred cCCCCcEEEEEEEeeecCCCeEEEEeeCCcCCCeEecCceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCcccee
Confidence 3579999999999886 666 99999987642110000000001 11368899998888 999999999887654333
Q ss_pred EEEec-----------CC-CCeeccCc--c--eeCCCeeEEEEEEccCC
Q psy12132 80 QLSGI-----------PN-IPVFQKSS--R--RLGPDGYRLVWQVDTYS 112 (126)
Q Consensus 80 ~l~~~-----------~~-~~~~~~~~--~--~~~~~~~~l~~~~~~~~ 112 (126)
.+.+. .. +.++...+ . ...++.+.|.|...+..
T Consensus 210 ~~~~~~~~~~v~~~~~~~~p~v~~~~p~~~~~v~~G~~~~L~C~~~g~~ 258 (434)
T 1igy_B 210 KIVPRDCGCKPCICTVPEVSSVFIFPPKPKDTLLITVTPKVTCVVVDIS 258 (434)
T ss_dssp ECCCCCCCCCCCCCCCSSSCCEEEECCCHHHHHSTTSCCEEEEEECCCC
T ss_pred eccCCCCCCccccCCCCcCcEEEEeCCChHHhcccCCCcEEEEEEeccc
Confidence 33221 00 23322222 1 35688899999998764
No 427
>1lp9_E T-cell receptor alpha chain; immunoregulatory complex, class I MHC:TCR CO-crystal, immune; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 2j8u_E 2jcc_E 2uwe_E 1nfd_A*
Probab=99.05 E-value=3.1e-09 Score=61.20 Aligned_cols=69 Identities=12% Similarity=0.126 Sum_probs=50.1
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECC--E---Eec---------cCCcEEEEe--cCCeEEEEEecCCCCCCEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDG--T---AIT---------LGGRIDMHV--SSEKHSLLVRHIKDTDFGNYM 65 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~--~---~~~---------~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~ 65 (126)
.+.+.+|+++.|.|.+.+.....+.|++.. . .+. ...++.... ......|.|.+++..|.|.|.
T Consensus 10 ~v~v~~G~~v~L~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~~Dsg~Y~ 89 (194)
T 1lp9_E 10 LVTLTEGLPVMLNCTYQSTYSPFLFWYVQHLNEAPKLLLKSFTDNKRPEHQGFHATLHKSSSSFHLQKSSAQLSDSALYY 89 (194)
T ss_dssp EEEEETTSCEEECEEEECSSSCCEEEEEECTTSCCEEEEESCSSTTCCCCSSCEECCBGGGTBCCEEESSCCGGGCEEEE
T ss_pred EEEEecCCCEEEEEEeCCCCCceEEEEEeCCCCCeEEEEEEcCCCCcccCCCeEEEecCCCCEEEEEEcccCcccCeeEE
Confidence 356788999999999976666789998742 1 121 124555432 223458999999999999999
Q ss_pred EEEec
Q psy12132 66 CQASN 70 (126)
Q Consensus 66 C~~~~ 70 (126)
|.+.+
T Consensus 90 C~~~~ 94 (194)
T 1lp9_E 90 CALFL 94 (194)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 99876
No 428
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.05 E-value=7.8e-09 Score=60.66 Aligned_cols=119 Identities=16% Similarity=0.187 Sum_probs=70.4
Q ss_pred ceeccCCccEEEEEEeeec--CCCeeEEEECC-----EEe---c-----------cCCcEEEEecC--CeEEEEEecCCC
Q psy12132 2 HSITAPDMRAEIICNVYAN--PPAKVEWFRDG-----TAI---T-----------LGGRIDMHVSS--EKHSLLVRHIKD 58 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~--p~~~~~w~~~~-----~~~---~-----------~~~~~~~~~~~--~~~~l~i~~~~~ 58 (126)
.+.+.+|+++.|.|.+.+. ....+.|++.. ..+ . ...++.+..+. ....|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (226)
T 3mlr_H 9 GEVKQPGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQWTTLQA 88 (226)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTBTTBEEEEEGGGTEEEEEESSCCG
T ss_pred CEEEecCCCEEEEEEecCccccCCEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEecCCCCEEEEEECCCCc
Confidence 3578899999999999653 34579998732 111 0 11355554322 456899999999
Q ss_pred CCCEEEEEEEecCCc---------eeEEEEEEEec---CCCCeec-cCc--ceeCCCeeEEEEEEccCCcceeEEEEE
Q psy12132 59 TDFGNYMCQASNNLG---------SSQQFIQLSGI---PNIPVFQ-KSS--RRLGPDGYRLVWQVDTYSAIIQYLLKF 121 (126)
Q Consensus 59 ~d~g~y~C~~~~~~~---------~~~~~~~l~~~---~~~~~~~-~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~ 121 (126)
.|.|.|.|.+.+..+ .......+.+. ..+|.+. ..+ ....+..+.|+|.+.+..|. ...+.|
T Consensus 89 ~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~~v~W 165 (226)
T 3mlr_H 89 SDTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSSGTTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPE-PVTVSW 165 (226)
T ss_dssp GGCEEEEEEEEEEEESSSEEEEEEEECCCEEEEECCCCCBCCEEEEEEEEECSTTSSEEEEEEEEEEEBSS-CCEEEE
T ss_pred ccCEEEEEeEccCCCcccccchhhhhCCccEEeeccCCCCCCcEEEecCcccccCCCCEEEEEEEEEEECC-CeEEEE
Confidence 999999999875321 00111233332 1233222 111 12356789999999765442 124455
No 429
>2nw2_A ELS4 TCR alpha chain; T cell receptor, immune system; 1.40A {Homo sapiens} PDB: 2nx5_D 4dzb_A
Probab=99.05 E-value=5.9e-09 Score=60.31 Aligned_cols=111 Identities=12% Similarity=0.186 Sum_probs=65.6
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECC--E---Eec-c-------CCcEEEEe--cCCeEEEEEecCCCCCCEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDG--T---AIT-L-------GGRIDMHV--SSEKHSLLVRHIKDTDFGNYMC 66 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~--~---~~~-~-------~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C 66 (126)
.+.+.+|+++.|.|...+.....+.|++.. . .+. . ..++.... ......|.|.+++..|.|.|.|
T Consensus 8 ~~~v~~G~~vtL~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C 87 (200)
T 2nw2_A 8 EMTATEGAIVQINCTYQTSGFNGLFWYQQHAGEAPTFLSYNVLDGLEEKGRFSSFLSRSKGYSYLLLKELQMKDSASYLC 87 (200)
T ss_dssp EEEEETTCCEEEEEECCCSSCCCEEEEEECTTSCCEEEEEECSSEEEEETTEEEEEETTTTEEEEEECSCCGGGCEEEEE
T ss_pred eEEEccCCCEEEEEEECCCCCceEEEEEeCCCCCcEEEEEEcCCCcccCCceEEEecCCCCEEEEEECccCcccCCcEEE
Confidence 356789999999999876656689998742 1 221 1 34555542 2345689999999999999999
Q ss_pred EEecC--Cc--e--eEEEEEEEec--CCCCeeccCcceeCCCeeEEEEEEccCCcc
Q psy12132 67 QASNN--LG--S--SQQFIQLSGI--PNIPVFQKSSRRLGPDGYRLVWQVDTYSAI 114 (126)
Q Consensus 67 ~~~~~--~~--~--~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 114 (126)
.+.+. .+ . ....+.+... +..|...... .....+.|.|...+..|.
T Consensus 88 ~~~~~~~~~~~~fg~gt~L~V~~~~~~~~P~V~~~~--~~~~~~tl~Cl~~gf~P~ 141 (200)
T 2nw2_A 88 AVQASGGSYIPTFGRGTSLIVHPYIQNPDPAVYQLR--DSKSSDKSVCLFTDFDSQ 141 (200)
T ss_dssp EEC---CCCCCEECCCEEEEEECCCSSCCCEEEEEE--ECC--CCEEEEEESCCTT
T ss_pred EEEcCCcceeeeeCCCEEEEEecCcccCCCeEEEcC--CCCCCceEEEEeecccCC
Confidence 98651 11 1 1123333321 1222222111 122267899999776553
No 430
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.05 E-value=4e-09 Score=67.68 Aligned_cols=109 Identities=18% Similarity=0.224 Sum_probs=61.5
Q ss_pred ccCCccEEEEEEeeecCCC----eeEEEECCEEeccCCcEEE--EecCCeEEEEEecCCCCC---CEEEEEEEecCCcee
Q psy12132 5 TAPDMRAEIICNVYANPPA----KVEWFRDGTAITLGGRIDM--HVSSEKHSLLVRHIKDTD---FGNYMCQASNNLGSS 75 (126)
Q Consensus 5 ~~~g~~~~l~C~~~~~p~~----~~~w~~~~~~~~~~~~~~~--~~~~~~~~l~i~~~~~~d---~g~y~C~~~~~~~~~ 75 (126)
+.+|+++.|.|.+.+.+++ .+.|++++..+........ ..++.........+...| .|.|+|.+.|..+..
T Consensus 261 ~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~~ 340 (457)
T 1hzh_H 261 LMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPA 340 (457)
T ss_dssp HCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCEEEEEEECTTSCEEEEEEECCCHHHHHHTCCEEEEEECTTSSS
T ss_pred cccCCceEEEEEEEcccCCCCceEEEEEeCCccccccccccceecCCCcEEEEEEEEECHHHccCCCcEEEEEeCCCCCC
Confidence 4569999999999987553 8999999987653221111 111211111122234455 999999999765544
Q ss_pred EEEEEEEe---cCCCCeec-cCcc--eeCCCeeEEEEEEccCCc
Q psy12132 76 QQFIQLSG---IPNIPVFQ-KSSR--RLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 76 ~~~~~l~~---~~~~~~~~-~~~~--~~~~~~~~l~~~~~~~~~ 113 (126)
.....+.+ ...+|.+. .... ...+..+.|.|...+..|
T Consensus 341 ~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~l~C~~~g~~p 384 (457)
T 1hzh_H 341 PIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYP 384 (457)
T ss_dssp CEEEEECCCCCCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBS
T ss_pred cceEEEEcccCCCCCCeEEEECCCccccCCCcEEEEEEEEeEEC
Confidence 33333322 12233322 2111 123445999999977544
No 431
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.04 E-value=3e-09 Score=64.13 Aligned_cols=69 Identities=14% Similarity=0.342 Sum_probs=51.8
Q ss_pred eeccCCccEEEEEEeeecC--CCeeEEEECC--EE---ec--------------cCCcEEEEec--CCeEEEEEecCCCC
Q psy12132 3 SITAPDMRAEIICNVYANP--PAKVEWFRDG--TA---IT--------------LGGRIDMHVS--SEKHSLLVRHIKDT 59 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p--~~~~~w~~~~--~~---~~--------------~~~~~~~~~~--~~~~~l~i~~~~~~ 59 (126)
+.+.+|+++.|.|.+.+.+ .+.+.|++++ .. +. ...++.+..+ .....|.|.+++..
T Consensus 144 ~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~ 223 (276)
T 3auv_A 144 GLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAE 223 (276)
T ss_dssp EEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred eEecCCCeEEEEEEecCccCCCCEEEEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChh
Confidence 4577899999999998776 4899999952 11 10 1245555433 23458999999999
Q ss_pred CCEEEEEEEecC
Q psy12132 60 DFGNYMCQASNN 71 (126)
Q Consensus 60 d~g~y~C~~~~~ 71 (126)
|.|.|.|.+.|.
T Consensus 224 DsG~Y~C~a~n~ 235 (276)
T 3auv_A 224 DTAVYYCARFVF 235 (276)
T ss_dssp GCEEEEEEEECS
T ss_pred HCEEEEEEEEcC
Confidence 999999999986
No 432
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.04 E-value=9.8e-09 Score=67.01 Aligned_cols=112 Identities=21% Similarity=0.273 Sum_probs=69.9
Q ss_pred ceeccCCccEEEEEEeeecCC----CeeEEEEC--CE---Eec-------------cCCcEEEEec--CCeEEEEEecCC
Q psy12132 2 HSITAPDMRAEIICNVYANPP----AKVEWFRD--GT---AIT-------------LGGRIDMHVS--SEKHSLLVRHIK 57 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~----~~~~w~~~--~~---~~~-------------~~~~~~~~~~--~~~~~l~i~~~~ 57 (126)
.+.+.+|+++.|.|.+.+.+. ..+.|+++ +. .+. ...++.+..+ .....|.|.+++
T Consensus 9 ~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 88 (512)
T 1zvo_C 9 PGLVKPSETLSLTCIVSGGPIRRTGYYWGWIRQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTSRNQFSLNLRSMS 88 (512)
T ss_pred CEEEcCCCCEEEEEEEcccccCCCCeeEEEEEeCCCCCcEEEEEEecCCCEEECCccCCceEEEecCCCCEEEEEECcCC
Confidence 467889999999999976543 67999985 22 110 1245555432 235789999999
Q ss_pred CCCCEEEEEEEecCCc-----------e--eEEEEEEEecC---CCCeec-cCcc---eeCCCeeEEEEEEccCCc
Q psy12132 58 DTDFGNYMCQASNNLG-----------S--SQQFIQLSGIP---NIPVFQ-KSSR---RLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 58 ~~d~g~y~C~~~~~~~-----------~--~~~~~~l~~~~---~~~~~~-~~~~---~~~~~~~~l~~~~~~~~~ 113 (126)
..|.|.|.|.+.+..+ . ......|.|.. .+|.+. ..+. ...+..+.|+|.+.+..|
T Consensus 89 ~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~~~~~v~L~C~~~g~~P 164 (512)
T 1zvo_C 89 AADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCRHPKDNSPVVLACLITGYHP 164 (512)
T ss_pred HHHCEEEEEEEECCCCccccccccccccccccCceEEEecccCCcCCeEEeccCCcccccCCCeEEEEEEEEeeec
Confidence 9999999999887532 0 11223444431 233222 1111 123478999999977644
No 433
>3kg5_A B-cell antigen receptor complex-associated protei chain; CD79B, IG-beta, BCR, immunoglobulin domain, protein binding; 3.20A {Homo sapiens}
Probab=99.04 E-value=6.3e-09 Score=56.49 Aligned_cols=68 Identities=19% Similarity=0.391 Sum_probs=53.3
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEEC---CEE---e-ccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecC
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRD---GTA---I-TLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNN 71 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~---~~~---~-~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~ 71 (126)
+.+.+|++++|.|...+. ...+.|++. +.. + ....++..........|.|.+++..|+|.|.|.+.+.
T Consensus 28 ~~v~~G~svtL~C~~s~~-~~~v~Wyrq~~~g~~~~~l~~~~~rf~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 102 (134)
T 3kg5_A 28 IARKRGFTVKMHCYMNSA-SGNVSWLWKQEMDENPQQLKLEKGRMEESQNESLATLTIQGIRFEDNGIYFCQQKCN 102 (134)
T ss_dssp EEEETTCCEEEEEECCCT-TCCCEEEEESSSSSCCEECCCCTTTEEEEECSSEEEEEECSCCTTTCEEEEEEEECT
T ss_pred EEEeCCCCEEEEEEECCC-CceEEEEEECCCCCCcEEEEEECCeEEEEccCCEEEEEECCCCcCcCEEEEEEEEcC
Confidence 567889999999999765 578999987 322 1 2345776665556779999999999999999998875
No 434
>2otu_A FV light chain variable domain; antibody FV polyglutamine complex, immune system; 1.68A {Mus musculus} PDB: 2otw_A 2gsg_A
Probab=99.04 E-value=6.6e-09 Score=54.85 Aligned_cols=70 Identities=16% Similarity=0.338 Sum_probs=51.7
Q ss_pred ceeccCCccEEEEEEeeec-CCCeeEEEEC--C---EEe-c--c----------CCcEEEEecCCeEEEEEecCCCCCCE
Q psy12132 2 HSITAPDMRAEIICNVYAN-PPAKVEWFRD--G---TAI-T--L----------GGRIDMHVSSEKHSLLVRHIKDTDFG 62 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~-p~~~~~w~~~--~---~~~-~--~----------~~~~~~~~~~~~~~l~i~~~~~~d~g 62 (126)
.+.+.+|+++.|.|...+. +...+.|++. + ..+ . . ..++..........|.|.+++..|.|
T Consensus 10 ~~~~~~G~~v~L~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~~~~~Dsg 89 (115)
T 2otu_A 10 SASFSLGASAKLTCTLSSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNIQPEDEA 89 (115)
T ss_dssp CEECCTTCCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CEEECCCCCEEEEEEecCCCCCeEEEEEEeCCCCCceEEEEEecCCceecCcccCCCEEEEccCCEEEEEECCCChhHCE
Confidence 4678899999999998754 5678999873 1 111 1 1 23565554445678999999999999
Q ss_pred EEEEEEecC
Q psy12132 63 NYMCQASNN 71 (126)
Q Consensus 63 ~y~C~~~~~ 71 (126)
.|.|.+.+.
T Consensus 90 ~Y~C~~~~~ 98 (115)
T 2otu_A 90 IYICGVGDT 98 (115)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEecC
Confidence 999998764
No 435
>1u3h_A T-cell receptor alpha-chain; complex, immune system; 2.42A {Mus musculus} SCOP: b.1.1.1 PDB: 1b88_A 1kj2_A* 1kb5_A 1d9k_A*
Probab=98.61 E-value=2.2e-11 Score=64.03 Aligned_cols=70 Identities=20% Similarity=0.285 Sum_probs=51.1
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCE--Ee------------ccCCcEEEEe--cCCeEEEEEecCCCCCCEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGT--AI------------TLGGRIDMHV--SSEKHSLLVRHIKDTDFGNYM 65 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~--~~------------~~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~ 65 (126)
.+.+.+|++++|.|.+.+.+.+.+.|++... .+ ....++.+.. ......|.|.+++..|.|.|.
T Consensus 8 ~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~ 87 (110)
T 1u3h_A 8 SLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYF 87 (110)
Confidence 3567889999999999877778899998531 11 1123444433 223458999999999999999
Q ss_pred EEEecC
Q psy12132 66 CQASNN 71 (126)
Q Consensus 66 C~~~~~ 71 (126)
|.+.+.
T Consensus 88 C~~~~~ 93 (110)
T 1u3h_A 88 CAASAN 93 (110)
Confidence 998764
No 436
>1nko_A Sialic acid binding IG-like lectin 7; immunoglobulin, siglec7, immune system; 1.45A {Homo sapiens} SCOP: b.1.1.1 PDB: 2g5r_A* 1o7v_A* 2df3_A* 1o7s_A* 2hrl_A*
Probab=99.04 E-value=2.3e-09 Score=57.92 Aligned_cols=70 Identities=19% Similarity=0.405 Sum_probs=49.9
Q ss_pred ceeccCCccEEEEEEeee-------cCCCeeEEEECCE------Eecc-----------CCcEEEEec--CCeEEEEEec
Q psy12132 2 HSITAPDMRAEIICNVYA-------NPPAKVEWFRDGT------AITL-----------GGRIDMHVS--SEKHSLLVRH 55 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~-------~p~~~~~w~~~~~------~~~~-----------~~~~~~~~~--~~~~~l~i~~ 55 (126)
.+.+.+|+++.|.|.... .....+.|++... .+.. ..++.+..+ ....+|.|.+
T Consensus 15 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 94 (132)
T 1nko_A 15 SVTVQEGMCVHVRCSFSYPVDSDTDSDPVHGYWFRAGNDISWKAPVATNNPAWAVQEETRDRFHLLGDPQTKNCTLSIRD 94 (132)
T ss_dssp EEEEETTCCEEECEEEECCCCTTTTTSCCEEEEEEC-----CCSCSEESCTTCCCCGGGTTTEEECSCGGGTBCCEEECS
T ss_pred EEEEcCCCeEEEEccccCCCccccCCCccEEEEEECCCCCCcccEEEeCCCccccccccCccEEEeCCCCCCceEEEEcc
Confidence 367889999999999872 3456899998643 1211 145555432 2356899999
Q ss_pred CCCCCCEEEEEEEecC
Q psy12132 56 IKDTDFGNYMCQASNN 71 (126)
Q Consensus 56 ~~~~d~g~y~C~~~~~ 71 (126)
++..|+|.|.|.+.+.
T Consensus 95 v~~~DsG~Y~C~v~~~ 110 (132)
T 1nko_A 95 ARMSDAGRYFFRMEKG 110 (132)
T ss_dssp CCGGGCEEEEEEEEET
T ss_pred cCcccCeeEEEEEEcC
Confidence 9999999999998764
No 437
>1oga_D T-cell receptor alpha chain V region, beta-2-microglobulin; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2xna_A 2xn9_A 2vlm_D 2vlk_D 2vlj_D 2vlr_D 2cdf_A 2wbj_C* 3qdm_D 3qeq_D
Probab=99.04 E-value=9.5e-09 Score=60.09 Aligned_cols=109 Identities=15% Similarity=0.262 Sum_probs=65.9
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECC-----EEe-c--------cCCcEEEEe--cCCeEEEEEecCCCCCCEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDG-----TAI-T--------LGGRIDMHV--SSEKHSLLVRHIKDTDFGNYM 65 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~-----~~~-~--------~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~ 65 (126)
.+.+.+|+++.|.|.+. .....+.|++.. ..+ . ...++.... ......|.|.+++..|.|.|.
T Consensus 10 ~v~v~~G~~vtL~C~~~-~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~v~~~Dsg~Y~ 88 (215)
T 1oga_D 10 FLSIQEGENLTVYCNSS-SVFSSLQWYRQEPGEGPVLLVTVVTGGEVKKLKRLTFQFGDARKDSSLHITAAQPGDTGLYL 88 (215)
T ss_dssp EEEEETTCCEEEEEECS-SCCSCEEEEEECTTSCCEEEEEECSTTCEEEETTEEEEECTTSSEEEEEESSCCGGGCEEEE
T ss_pred EEEEecCCCEEEEEEEc-CCCceEEEEEeCCCCCcEEEEEEcCCCCcccCCCEEEEEcCCCCEEEEEEccCCcccCceEE
Confidence 35678999999999984 345679998742 111 1 124555542 234578999999999999999
Q ss_pred EEEecCCce----eEEEEEEEec--CCCCeeccCcceeCCCeeEEEEEEccCCc
Q psy12132 66 CQASNNLGS----SQQFIQLSGI--PNIPVFQKSSRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 66 C~~~~~~~~----~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 113 (126)
|.+....+. ....+.+.+. +..|.... . ......+.|+|...+..|
T Consensus 89 C~~~~~~~~~~fg~gt~L~V~~~~~~~~P~V~~-~-~~~~~~vtL~C~~~gf~P 140 (215)
T 1oga_D 89 CAGAGSQGNLIFGKGTKLSVKPNIQNPDPAVYQ-L-RDSKSSDKSVCLFTDFDS 140 (215)
T ss_dssp EEEECTTSSEEECCCEEEEEECCCSSCCCEEEE-E-EBSSSSSCEEEEEESCCT
T ss_pred EEEecccccceeCCCEEEEEeccCCCcCCEEEE-c-CCCCCCeEEEEEcccccc
Confidence 998753211 1223333332 12222211 1 112247899999977543
No 438
>1tvd_A T cell receptor, ES204 V delta; immunoreceptor, TCR, delta chain, variable domain; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=99.03 E-value=2.9e-09 Score=56.31 Aligned_cols=70 Identities=14% Similarity=0.333 Sum_probs=51.2
Q ss_pred ceeccCCccEEEEEEeeec-CCCeeEEEECC--E---Eec------------cCCcEEEEe--cCCeEEEEEecCCCCCC
Q psy12132 2 HSITAPDMRAEIICNVYAN-PPAKVEWFRDG--T---AIT------------LGGRIDMHV--SSEKHSLLVRHIKDTDF 61 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~-p~~~~~w~~~~--~---~~~------------~~~~~~~~~--~~~~~~l~i~~~~~~d~ 61 (126)
.+.+.+|++++|.|.+... +...+.|++.. . .+. ...++.... ......|.|.+++..|+
T Consensus 9 ~~~~~~G~~vtL~C~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~Ds 88 (116)
T 1tvd_A 9 DQTVASGSEVVLLCTYDTVYSNPDLFWYRIRPDYSFQFVFYGDDSRSEGADFTQGRFSVKHILTQKAFHLVISPVRTEDS 88 (116)
T ss_dssp CEEEETTCCEEECCEEECCSSSCCEEEEEECTTSCEEEEEEECSSCEEECGGGTTTEEEEEEGGGTEEEEEESSCCGGGC
T ss_pred cEEEecCCeEEEEeEeEcCCCCcEEEEEEeCCCCCcEEEEEECCcccccCcccCCCEEEEEecCCCEEEEEEccCChHHC
Confidence 4678899999999998754 45679998742 1 111 134665543 33456899999999999
Q ss_pred EEEEEEEecC
Q psy12132 62 GNYMCQASNN 71 (126)
Q Consensus 62 g~y~C~~~~~ 71 (126)
|.|.|.+.+.
T Consensus 89 G~Y~C~~~~~ 98 (116)
T 1tvd_A 89 ATYYCAFTLP 98 (116)
T ss_dssp EEEEEEEECT
T ss_pred EEEEEEEeCC
Confidence 9999998873
No 439
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.03 E-value=1.2e-09 Score=63.21 Aligned_cols=71 Identities=7% Similarity=0.138 Sum_probs=48.2
Q ss_pred eccCCccEEEEEEeeecCC---CeeEEEECCEEeccCCcEEE-E---ecCCeEEEEEecCCCCCCEEEEEEEecCCce
Q psy12132 4 ITAPDMRAEIICNVYANPP---AKVEWFRDGTAITLGGRIDM-H---VSSEKHSLLVRHIKDTDFGNYMCQASNNLGS 74 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~p~---~~~~w~~~~~~~~~~~~~~~-~---~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 74 (126)
.+.+|+.+.|.|.+.+.++ +++.|++++..+........ . .......|.+.....+|.|.|+|.+.|..+.
T Consensus 102 ~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~~~d~~g~ytC~A~n~~~~ 179 (202)
T 1vca_A 102 PLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLVCRAKLHIDE 179 (202)
T ss_dssp CEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEECCCGGGTTCEEEEEEEECSCC
T ss_pred EEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEEEEEeeeccCCCeEEEEEEccccC
Confidence 3568999999999987643 37899999987643210000 0 0011235678888888899999999987654
No 440
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.03 E-value=1.7e-09 Score=64.33 Aligned_cols=63 Identities=11% Similarity=0.234 Sum_probs=48.7
Q ss_pred eccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecC
Q psy12132 4 ITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNN 71 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~ 71 (126)
.+.+|++++|.|.+.+. .+.+.|+|++..+.. ..........|.|.+++..|.|.|+|.+.+.
T Consensus 112 ~v~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~----~~~~~~~~~~l~I~~v~~~d~G~Y~C~a~n~ 174 (242)
T 1p6f_A 112 EVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHV----QRGYGKVQAEFPLGPVTTAHRGTYRCFGSYN 174 (242)
T ss_dssp EEETTCEEEEEEECTTS-CSEEEEEECSSSCEE----EEEECSSEEEEEEEECCGGGCEEEEEEEEEE
T ss_pred ccCCCCcEEEEEecCCC-CCEEEEEECCCccCc----cccCCCceEEEEeCCCccccCEEEEEEEECC
Confidence 45789999999998754 569999999865432 1122334568999999999999999999875
No 441
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.03 E-value=1e-09 Score=63.51 Aligned_cols=64 Identities=13% Similarity=0.223 Sum_probs=47.0
Q ss_pred ccCCccEEEEEEeeec----CCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCce
Q psy12132 5 TAPDMRAEIICNVYAN----PPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGS 74 (126)
Q Consensus 5 ~~~g~~~~l~C~~~~~----p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 74 (126)
+.+|+.+.|.|.+.+. |.|.+.|++++..+... .. .....|.|..+..+|.|.|+|.+.|..+.
T Consensus 135 ~~~G~~v~L~C~~~~~~~~~p~p~v~W~~~~~~~~~~-~~-----~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~ 202 (214)
T 2zg1_A 135 LESGRPTRLSCSLPGSCEAGPPLTFSWTGNALSPLDP-ET-----TRSSELTLTPRPEDHGTNLTCQMKRQGAQ 202 (214)
T ss_dssp CCTTCCEEEEEECTTCCSCSSCCEEEEESSTTSSSCS-SC-----CCSSEEEECCCTTCCSCEEEEEEECC---
T ss_pred ccCCCeEEEEEEeccCCCCCCCceEEEeCCCCccCCC-Cc-----eeEEEEEEecccHHcCcEEEEEEEeCCCC
Confidence 4579999999999764 78899999987543211 11 12347999999999999999999997543
No 442
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.03 E-value=1.4e-09 Score=62.69 Aligned_cols=65 Identities=14% Similarity=0.114 Sum_probs=46.7
Q ss_pred eccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecC-CeEEEEEecCCCCCCEEEEEEEecC
Q psy12132 4 ITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSS-EKHSLLVRHIKDTDFGNYMCQASNN 71 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~-~~~~l~i~~~~~~d~g~y~C~~~~~ 71 (126)
.+.+|++++|.|.+.+ +.+.+.|+|++..+...........+ ....|.|.++. |.|.|+|.+.+.
T Consensus 118 ~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--d~G~Y~C~a~~~ 183 (201)
T 1nkr_A 118 TVLAGENVTLSCSSRS-SYDMYHLSREGEAHERRLPAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFH 183 (201)
T ss_dssp EECTTCEEEEEEEESS-CCSEEEEEETTCSSCEEEECEEEETTEEEEEEEEEECC--SCEEEEEEEEET
T ss_pred ccCCCCeEEEEEeCCC-CCceEEEEECCcccCcccccccccCCceEEEEEeCCcC--CCeeEEEEEEcC
Confidence 4678999999999875 57899999998765432111111111 14579999998 999999998864
No 443
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.02 E-value=1.3e-09 Score=64.66 Aligned_cols=68 Identities=16% Similarity=0.412 Sum_probs=51.1
Q ss_pred eeccCCccEEEEEEeeecC--CCeeEEEEC--CEEec-----------------cCCcEEEEec--CCeEEEEEecCCCC
Q psy12132 3 SITAPDMRAEIICNVYANP--PAKVEWFRD--GTAIT-----------------LGGRIDMHVS--SEKHSLLVRHIKDT 59 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p--~~~~~w~~~--~~~~~-----------------~~~~~~~~~~--~~~~~l~i~~~~~~ 59 (126)
+.+.+|+++.|.|.+.+.+ .+.+.|+++ +..+. ...++.+..+ .....|.|.+++..
T Consensus 141 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~ 220 (250)
T 3esu_F 141 ELVKPGASVKISCKDSGYAFSSSWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSV 220 (250)
T ss_dssp EEECTTCCEEEEEECCSTTGGGSEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred eEEcCCceEEEEEEecCCcccCCEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcc
Confidence 4577899999999998766 779999986 32211 1245555432 34568999999999
Q ss_pred CCEEEEEEEec
Q psy12132 60 DFGNYMCQASN 70 (126)
Q Consensus 60 d~g~y~C~~~~ 70 (126)
|.|.|.|.+.+
T Consensus 221 DsG~Y~C~~~~ 231 (250)
T 3esu_F 221 DSAVYFCARSG 231 (250)
T ss_dssp GCEEEEEEEEC
T ss_pred cCEEEEEEEec
Confidence 99999999986
No 444
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.02 E-value=3e-09 Score=63.36 Aligned_cols=69 Identities=16% Similarity=0.397 Sum_probs=51.4
Q ss_pred eeccCCccEEEEEEeeecC--CCeeEEEEC--CEEe------c-----------cCCcEEEEec--CCeEEEEEecCCCC
Q psy12132 3 SITAPDMRAEIICNVYANP--PAKVEWFRD--GTAI------T-----------LGGRIDMHVS--SEKHSLLVRHIKDT 59 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p--~~~~~w~~~--~~~~------~-----------~~~~~~~~~~--~~~~~l~i~~~~~~ 59 (126)
..+.+|+++.|.|.+.+.+ .+.+.|+++ +..+ . ...++.+..+ .....|.|.+++..
T Consensus 144 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~ 223 (256)
T 3ux9_B 144 GLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAE 223 (256)
T ss_dssp EEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred eEEcCCCeEEEEEEEeCCcccccEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChh
Confidence 3467899999999998766 679999985 3211 0 1135555443 33567999999999
Q ss_pred CCEEEEEEEecC
Q psy12132 60 DFGNYMCQASNN 71 (126)
Q Consensus 60 d~g~y~C~~~~~ 71 (126)
|.|.|.|.+.+.
T Consensus 224 DsG~Y~C~~~~~ 235 (256)
T 3ux9_B 224 DTAVYYCARYID 235 (256)
T ss_dssp GCEEEEEEEEET
T ss_pred hCEEEEEEEEcC
Confidence 999999999885
No 445
>2qhl_A Novel immune-type receptor 10; immunoglobulin variable domain-like beta-sandwich, immune system; 1.56A {Ictalurus punctatus} PDB: 3b5t_A 2qjd_A 2qte_A 2qqq_A
Probab=99.02 E-value=1.2e-09 Score=57.43 Aligned_cols=70 Identities=19% Similarity=0.410 Sum_probs=52.7
Q ss_pred ceeccCCccEEEEEEee-ecCCCeeEEEECC-----EEec----c-----------CCcEEEEecCCeEEEEEecCCCCC
Q psy12132 2 HSITAPDMRAEIICNVY-ANPPAKVEWFRDG-----TAIT----L-----------GGRIDMHVSSEKHSLLVRHIKDTD 60 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~-~~p~~~~~w~~~~-----~~~~----~-----------~~~~~~~~~~~~~~l~i~~~~~~d 60 (126)
.+.+.+|++++|.|.+. +.+.+.+.|++.. ..+. . ..++..........|.|.+++..|
T Consensus 8 ~~~~~~G~~v~L~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~~~~~D 87 (111)
T 2qhl_A 8 VKTVKRGENVTMECSMSKVKDKDKLAWYRQSFGKVPQYFVRYYSSNSGYKFAEGFKDSRFSMTVNDQKFDLNIIGTREDD 87 (111)
T ss_dssp EEECCTTCCEEECCBCTTCSCGGGEEEEEECTTBCCEEEEEECSSSSCEEECTTCCCTTEEEEESSSBEEEEESSCCGGG
T ss_pred eEEEeCCCCEEEEEEccCCcccceEEEEEecCCCCCEEEEEEeccCCccccccCCCCCcEEEEEcCCeEEEEECCCChhH
Confidence 35788999999999987 6666789998832 1111 0 346665555556789999999999
Q ss_pred CEEEEEEEecC
Q psy12132 61 FGNYMCQASNN 71 (126)
Q Consensus 61 ~g~y~C~~~~~ 71 (126)
+|.|.|.+.+.
T Consensus 88 sG~Y~C~~~~~ 98 (111)
T 2qhl_A 88 GGEYFCGEVEG 98 (111)
T ss_dssp CEEEEEEEEET
T ss_pred CEEEEEEEccC
Confidence 99999998764
No 446
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.02 E-value=5.5e-10 Score=64.68 Aligned_cols=69 Identities=20% Similarity=0.316 Sum_probs=49.8
Q ss_pred CCccEEEEEEeee-cCCC-eeEEEECCEEeccCCcEE--EEecC-----CeEEEEEecCCCCCCEEEEEEEecCCcee
Q psy12132 7 PDMRAEIICNVYA-NPPA-KVEWFRDGTAITLGGRID--MHVSS-----EKHSLLVRHIKDTDFGNYMCQASNNLGSS 75 (126)
Q Consensus 7 ~g~~~~l~C~~~~-~p~~-~~~w~~~~~~~~~~~~~~--~~~~~-----~~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 75 (126)
.|+.+.|.|.+.+ .|.+ .+.|++++..+....... ..... ....|.|.++...|.|.|+|.+.|.....
T Consensus 126 ~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 203 (213)
T 3d9a_L 126 TSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 203 (213)
T ss_dssp HTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred CCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeeecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCC
Confidence 5789999999987 5555 899999998775431110 00011 12389999999999999999999976543
No 447
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.01 E-value=2.9e-08 Score=56.66 Aligned_cols=113 Identities=12% Similarity=0.036 Sum_probs=70.5
Q ss_pred ceeccCCccEEEEEEeeecCCCe-eEEEEC-CEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAK-VEWFRD-GTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFI 79 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~-~~w~~~-~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 79 (126)
+..+.+|+++.|.|.+. -+.|. +.|.-. +...... .......|.+.++.. | |.|.|.+..........+
T Consensus 8 ~~~V~~G~Sv~l~Cs~~-c~~p~~~~~~t~l~~~~~~~------~~~~~~~l~l~~vs~-~-g~y~C~~~c~~~~~~~~~ 78 (185)
T 1iam_A 8 KVILPRGGSVLVTCSTS-CDQPKLLGIETPLPKKELLL------PGNNRKVYELSNVQE-D-SQPMCYSNCPDGQSTAKT 78 (185)
T ss_dssp EEEEETTEEEEEEEEEC-SSSCSEEEEECSSCEEEECS------SSSSEEEEEEEEECS-C-BCCEEEEECSSCEEEEEC
T ss_pred CcEEeCCCCEEEEEEcc-CCCCccceEEeeCCCccEec------cCCceeEEEEEecCc-C-CEEEEEEECCCCceEEEE
Confidence 35688999999999996 45554 667421 1111100 011224688888873 4 899999876544566677
Q ss_pred EEEecCCCCeeccCc---ceeCCCeeEEEEEEccCCcceeEEEEEEE
Q psy12132 80 QLSGIPNIPVFQKSS---RRLGPDGYRLVWQVDTYSAIIQYLLKFRE 123 (126)
Q Consensus 80 ~l~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~r~ 123 (126)
.+.+...|......+ ....++.+.|+|.+.+..|...+.+.|.+
T Consensus 79 ~l~V~~~P~~v~i~~~~~~~~~G~~~tL~C~v~g~~P~~~l~i~w~k 125 (185)
T 1iam_A 79 FLTVYWTPERVELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLR 125 (185)
T ss_dssp EEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEE
T ss_pred EEEEeCCCCCCEEccCCccccCCCcEEEEEEcCCccCCCCcEEEEEe
Confidence 777643333222222 24678899999999888776555455544
No 448
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.01 E-value=3.1e-08 Score=59.13 Aligned_cols=111 Identities=14% Similarity=0.199 Sum_probs=66.4
Q ss_pred eeccCCccEEEEEEeeecC--CCeeEEEECC-----EEec--------------cCCcEEEEecC--CeEEEEEecCCCC
Q psy12132 3 SITAPDMRAEIICNVYANP--PAKVEWFRDG-----TAIT--------------LGGRIDMHVSS--EKHSLLVRHIKDT 59 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p--~~~~~w~~~~-----~~~~--------------~~~~~~~~~~~--~~~~l~i~~~~~~ 59 (126)
+.+.+|+++.|.|.+.+.. ...+.|++.. ..+. ...++.+..+. ....|.|.+++..
T Consensus 33 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 112 (256)
T 3sob_H 33 GLVQPGGSLRLSCAASGFTFTNSYIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISADTSKNTAYLQMNSLRAE 112 (256)
T ss_dssp CEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred EEEcCCCCEEEEEEeeccccCCCEEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEeCCCCEEEEEECCCCcc
Confidence 5678899999999997532 4579998731 1110 12455554332 4567999999999
Q ss_pred CCEEEEEEEecCCc-----------eeEEEEEEEec---CCCCeec-cCc--ceeCCCeeEEEEEEccCCc
Q psy12132 60 DFGNYMCQASNNLG-----------SSQQFIQLSGI---PNIPVFQ-KSS--RRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 60 d~g~y~C~~~~~~~-----------~~~~~~~l~~~---~~~~~~~-~~~--~~~~~~~~~l~~~~~~~~~ 113 (126)
|.|.|.|.+.+..+ .......+.+. ..+|.+. ..+ ....++.+.|+|.+.+..|
T Consensus 113 DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~~~~p 183 (256)
T 3sob_H 113 DTAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFP 183 (256)
T ss_dssp GCEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECSSCCBCCEEEEECCC-----TTEEEEEEEEEEEBS
T ss_pred cCEEEEEEEecCCCccccccccceeEECCCEEEEEecCCCCCCEEEEECCCcccccCCcEEEEEEEEEEEC
Confidence 99999999986421 11122234432 1223222 111 1235788999999976433
No 449
>3mbe_C I-AG7; T cell receptor, histocompatability antigen, MHC class II, I immune system; HET: NAG; 2.89A {Mus musculus}
Probab=99.01 E-value=8.8e-09 Score=60.68 Aligned_cols=110 Identities=14% Similarity=0.257 Sum_probs=67.3
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEEC--CEE---e-------ccCCcEEEEe--cCCeEEEEEecCCCCCCEEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRD--GTA---I-------TLGGRIDMHV--SSEKHSLLVRHIKDTDFGNYMCQA 68 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~--~~~---~-------~~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C~~ 68 (126)
+.+.+|+++.|.|...+. ...+.|++. +.. + ....|+.... ......|.|.+++..|+|.|.|.+
T Consensus 11 v~v~~G~sVtL~C~~s~~-~~~v~Wyrq~pg~~~~~l~~~~~~~~~~~Rfs~~~~~~~~~~sLtI~~lq~~DSG~Y~Ca~ 89 (229)
T 3mbe_C 11 LSLYEGADSGLRCNFSTT-MKSVQWFQQNHRGRLITLFYLAQGTKENGRLKSTFNSKERYSTLHIKDAQLEDSGTYFCAA 89 (229)
T ss_dssp EEEETTCCEEEEEEESSC-CSCEEEEEECSSSCBCCCEEESSEEEEETTEEEEEETTTTEEEEEECSCCSTTCBEEEEEE
T ss_pred EEEEcCCCEEEEEEEeCC-CcEEEEEEECCCCCcEEEEEeCCCCccCCCEEEEECCCCCEEEEEEECCcccCCCCEEEEE
Confidence 567889999999999766 668999984 211 1 0124555542 334678999999999999999998
Q ss_pred ecCC--c--e--eEEEEEEEec--CCCCeeccCcceeCCCeeEEEEEEccCCcce
Q psy12132 69 SNNL--G--S--SQQFIQLSGI--PNIPVFQKSSRRLGPDGYRLVWQVDTYSAII 115 (126)
Q Consensus 69 ~~~~--~--~--~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 115 (126)
.... . . ....+.+... ++.|.... +.. ....+.|.|...+..|.+
T Consensus 90 ~~~~~~~~~~fG~GT~L~V~~~~~~p~P~Vf~-~~~-~~~~vtl~Cl~~gf~P~i 142 (229)
T 3mbe_C 90 EDGGSGNKLIFGTGTLLSVKPNIQNPEPAVYQ-LKD-PRSQDSTLCLFTDFDSQI 142 (229)
T ss_dssp ECSSSTTCEEECCCCEEEEECCCSSCCCEEEE-EEC-TTCTTCEEEEEESCCSSS
T ss_pred EeCCCcccceeCCCEEEEEecccCCCCCEEEE-ccC-CCCCEEEEEEccccCCce
Confidence 7521 1 0 1123333321 22222211 111 223478999998876633
No 450
>1fo0_B Protein (BM3.3 T cell receptor beta-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_B* 2ol3_B* 1kb5_B 1kj2_B*
Probab=99.01 E-value=5.1e-09 Score=55.06 Aligned_cols=69 Identities=9% Similarity=0.173 Sum_probs=49.3
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECC--E---Eec-c-----------C-CcEEEEecCCeEEEEEecCCCCCCEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDG--T---AIT-L-----------G-GRIDMHVSSEKHSLLVRHIKDTDFGN 63 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~--~---~~~-~-----------~-~~~~~~~~~~~~~l~i~~~~~~d~g~ 63 (126)
.+.+.+|++++|.|...+.+.+.+.|++.. . .+. . . .++........ .|.|.+++..|+|.
T Consensus 10 ~~~v~~G~~vtL~C~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~-~L~I~~~~~~Dsg~ 88 (112)
T 1fo0_B 10 WRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDT-ELRLQVANMSQGRT 88 (112)
T ss_dssp EEECCTTCCEEEEEEESCTTCCEEEEEEECTTCCEEEEEECCSTTCEEEEEETTEEEEEEEEETT-EEEEEEESCCSCEE
T ss_pred eEEEecCCcEEEEEEeCCCCCceEEEEEECCCCCCEEEEEEeCCCceecCccccCCEEEEcCCCC-eEEEcCCCHhHCEE
Confidence 357889999999999876667789999842 1 121 0 0 34443333233 89999999999999
Q ss_pred EEEEEecC
Q psy12132 64 YMCQASNN 71 (126)
Q Consensus 64 y~C~~~~~ 71 (126)
|.|.+.+.
T Consensus 89 Y~C~~~~~ 96 (112)
T 1fo0_B 89 LYCTCSAD 96 (112)
T ss_dssp EEEEEESS
T ss_pred EEEEEEcC
Confidence 99998764
No 451
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.00 E-value=7.8e-10 Score=64.01 Aligned_cols=68 Identities=21% Similarity=0.307 Sum_probs=48.5
Q ss_pred CCccEEEEEEeee-cCCC-eeEEEECCEEeccC-Cc-EEEEe--cC---CeEEEEEecCCCCCCEEEEEEEecCCce
Q psy12132 7 PDMRAEIICNVYA-NPPA-KVEWFRDGTAITLG-GR-IDMHV--SS---EKHSLLVRHIKDTDFGNYMCQASNNLGS 74 (126)
Q Consensus 7 ~g~~~~l~C~~~~-~p~~-~~~w~~~~~~~~~~-~~-~~~~~--~~---~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 74 (126)
.|+.+.|.|.+.+ .|.+ .+.|++++..+... .. ..... ++ ..+.|.|..+...|.|.|+|.+.|....
T Consensus 125 ~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (210)
T 1lk3_L 125 ATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSS 201 (210)
T ss_dssp TTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCS
T ss_pred cCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccCCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCC
Confidence 5889999999987 4444 89999999876543 10 00111 11 1237899999999999999999987543
No 452
>1oaq_L Light chain; antibody, allergy, IGE, conformational diversity, multispecificity; 1.50A {Rattus rattus} SCOP: b.1.1.1 PDB: 1ocw_L 2bjm_L* 1oau_L* 1oar_L* 1oaz_L 1mfa_L* 1a6v_L* 1oax_L* 1oay_L* 1a6w_L* 1a6u_L 1dl7_L*
Probab=99.00 E-value=3.5e-09 Score=56.35 Aligned_cols=69 Identities=14% Similarity=0.314 Sum_probs=51.8
Q ss_pred eeccCCccEEEEEEeeecC---CCeeEEEECC--E---Eec---------cCCcEEEEecCCeEEEEEecCCCCCCEEEE
Q psy12132 3 SITAPDMRAEIICNVYANP---PAKVEWFRDG--T---AIT---------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYM 65 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p---~~~~~w~~~~--~---~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~ 65 (126)
+.+.+|+++.|.|...+.+ ...+.|++.. . .+. ...++..........|.|.+++..|.|.|.
T Consensus 10 ~~~~~G~~v~L~C~~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~~~~~DsG~Y~ 89 (120)
T 1oaq_L 10 LTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGNKAALTITGAQTEDEAIYF 89 (120)
T ss_dssp EEECTTCEEEEEEEETTBCCCGGGCCEEEEEETTTEEEEEEETTTEECTTSCTTEEEEEETTEEEEEEESCCGGGCEEEE
T ss_pred EEEcCCCCEEEEEEeCCCccCCCCEEEEEEeCCCCCCeEEEEEcCccCCCCCCceEEecCCCeEEEEECCCChhhCeEEE
Confidence 5678999999999997654 4679998842 1 111 134666554455678999999999999999
Q ss_pred EEEecC
Q psy12132 66 CQASNN 71 (126)
Q Consensus 66 C~~~~~ 71 (126)
|.+.+.
T Consensus 90 C~~~~~ 95 (120)
T 1oaq_L 90 CALWYS 95 (120)
T ss_dssp EEEEET
T ss_pred EEEccC
Confidence 998865
No 453
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.00 E-value=8.6e-10 Score=64.37 Aligned_cols=74 Identities=14% Similarity=0.109 Sum_probs=51.2
Q ss_pred ccCCccEEEEEEeeec-CCC-eeEEEECCEEeccCCcEEEEecC---CeEEEEEecCCCCCCEEEEEEEecCCceeEEEE
Q psy12132 5 TAPDMRAEIICNVYAN-PPA-KVEWFRDGTAITLGGRIDMHVSS---EKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFI 79 (126)
Q Consensus 5 ~~~g~~~~l~C~~~~~-p~~-~~~w~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 79 (126)
+..|+.+.|.|.+.+. |.| .+.|++++..+...........+ ....|.|..+...| |.|+|.+.|..+......
T Consensus 139 ~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~~ 217 (222)
T 1q9r_B 139 AQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDK 217 (222)
T ss_dssp CCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEE
T ss_pred ccCCCcEEEEEEEccEECCCCEEEEecCCeEcceEeccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcEEE
Confidence 3468999999999985 888 99999988654321100111111 12368899998889 999999999877654433
No 454
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.00 E-value=1.3e-09 Score=66.34 Aligned_cols=70 Identities=13% Similarity=0.292 Sum_probs=52.5
Q ss_pred eeccCCccEEEEEEeeecCCC------eeEEEECC--E---Eec---------cCCcEEEEecCCeEEEEEecCCCCCCE
Q psy12132 3 SITAPDMRAEIICNVYANPPA------KVEWFRDG--T---AIT---------LGGRIDMHVSSEKHSLLVRHIKDTDFG 62 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~------~~~w~~~~--~---~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g 62 (126)
+.+.+|+++.|.|.+.+.+.+ .+.|+++. . .+. ...++..........|.|.+++..|.|
T Consensus 169 ~~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG 248 (291)
T 2gki_A 169 LAVSAGEKVTMSCKSSQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLA 248 (291)
T ss_dssp EEEETTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred EEEcCCCcEEEEEEcCCccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHCE
Confidence 457789999999999887765 89999852 2 111 134555544445568999999999999
Q ss_pred EEEEEEecCC
Q psy12132 63 NYMCQASNNL 72 (126)
Q Consensus 63 ~y~C~~~~~~ 72 (126)
.|.|.+.+..
T Consensus 249 ~Y~C~a~~~~ 258 (291)
T 2gki_A 249 VYYCKQSYYH 258 (291)
T ss_dssp EEEEEEEETT
T ss_pred EEEEEEccCC
Confidence 9999998753
No 455
>2aw2_A B and T lymphocyte attenuator; IGI domain, IGG domain, TNFRSF, protein-protein complex, IMM system; HET: NAG FUL; 2.80A {Homo sapiens} SCOP: b.1.1.1
Probab=99.00 E-value=7.7e-09 Score=52.89 Aligned_cols=79 Identities=16% Similarity=0.194 Sum_probs=55.2
Q ss_pred eccCCccEEEEEEeee-cCCCeeEEEE-CC---EEeccCCcEEEEecC--CeEEEEEecCCCCCCEEEEEEEecCCceeE
Q psy12132 4 ITAPDMRAEIICNVYA-NPPAKVEWFR-DG---TAITLGGRIDMHVSS--EKHSLLVRHIKDTDFGNYMCQASNNLGSSQ 76 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~-~p~~~~~w~~-~~---~~~~~~~~~~~~~~~--~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 76 (126)
.+..|+.+.|.|.+.+ .+.|+++|-| ++ ..+... .......+ ....|.+..+...|.|.|+|.+....|...
T Consensus 22 sv~~G~~f~leCpv~yc~~rP~VtWcKln~~~c~~L~~~-~q~w~E~~N~s~fvLhf~~V~~sDsGsYRCsAn~~sg~ie 100 (120)
T 2aw2_A 22 SILAGDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDR-QTSWKEEKNISFFILHFEPVLPNDNGSYRCSANFQSNLIE 100 (120)
T ss_dssp EEETTSCEEEEEEEECSSSCCEEEEEEECSSCEEECCSS-CEEEEECSSCEEEEEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred eEecCCeEEEEccEEeccCCCceEEEecCCceEEECccc-cccceecCCeeEEEEEEeeeeEcCCcceEEEeeCCCCcEE
Confidence 4678999999999987 5899999988 43 333321 11222322 235788999999999999999998876553
Q ss_pred -EEEEEEe
Q psy12132 77 -QFIQLSG 83 (126)
Q Consensus 77 -~~~~l~~ 83 (126)
+.+.+.|
T Consensus 101 SHsvtI~V 108 (120)
T 2aw2_A 101 SHSTTLYV 108 (120)
T ss_dssp CCCEEEEE
T ss_pred eeEEEEEE
Confidence 3333433
No 456
>2jju_A Signal regulatory protein beta-1; immunoglobulin domain, immunoglobulin superfamily, immune system, transmembrane, paired receptor; 1.19A {Homo sapiens} PDB: 2jjv_A 2uv3_A* 2jjt_A* 2jjs_A* 2jjw_A
Probab=98.99 E-value=1.8e-09 Score=58.01 Aligned_cols=70 Identities=21% Similarity=0.360 Sum_probs=49.3
Q ss_pred ceeccCCccEEEEEEeeec-CCCeeEEEECCE----EeccC-----CcEEEE-----ecCCeEEEEEecCCCCCCEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYAN-PPAKVEWFRDGT----AITLG-----GRIDMH-----VSSEKHSLLVRHIKDTDFGNYMC 66 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~-p~~~~~w~~~~~----~~~~~-----~~~~~~-----~~~~~~~l~i~~~~~~d~g~y~C 66 (126)
.+.+.+|++++|.|.+.+. +.+.+.|+++.. .+... .++... .......|.|.+++..|+|.|.|
T Consensus 12 ~~~v~~G~~vtL~C~~~~~~~~~~v~W~r~~~~~~~li~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C 91 (127)
T 2jju_A 12 SVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYC 91 (127)
T ss_dssp EEEEETTSCEEECCEESCCCSCCCEEEEECSSTTCEEEEESSSSCCTTEEEC-------CCBCCEEECSCCGGGCEEEEE
T ss_pred eEEEeCCCCEEEEEEEeCCCCCCEEEEEecCCCCcEEEEECCCCccCcEEeeEeeeecCCCEEEEEECCCCHHHCEEEEE
Confidence 3678889999999999765 567899999651 12111 133321 11224589999999999999999
Q ss_pred EEecC
Q psy12132 67 QASNN 71 (126)
Q Consensus 67 ~~~~~ 71 (126)
.+.+.
T Consensus 92 ~~~~~ 96 (127)
T 2jju_A 92 VKFRK 96 (127)
T ss_dssp EEEEC
T ss_pred EEEcC
Confidence 98874
No 457
>3rgv_A YAE62 TCR A chain; TCR, MHC, MHC class I, immune system; 2.90A {Mus musculus} PDB: 3c60_A
Probab=98.99 E-value=1.1e-08 Score=59.22 Aligned_cols=109 Identities=13% Similarity=0.214 Sum_probs=66.9
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEEC--C---EEec---------cCCcEEEEe--cCCeEEEEEecCCCCCCEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRD--G---TAIT---------LGGRIDMHV--SSEKHSLLVRHIKDTDFGNYM 65 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~--~---~~~~---------~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~ 65 (126)
.+.+.+|++++|.|...+.....+.|++. + +.+. ...|+.... ......|.|.+++..|+|.|.
T Consensus 9 ~v~v~~G~svtL~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~l~~~DsG~Y~ 88 (200)
T 3rgv_A 9 QVTLSENDFLFINCTYSTTGYPTLFWYVQYSGEGPQLLLQVTTANNKGSSRGFEATYDKGTTSFHLQKTSVQEIDSAVYY 88 (200)
T ss_dssp EEEEETTCCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSTTCEEEETTEEEECBTTTTBCCEEESSCCSTTCEEEE
T ss_pred EEEEeCCCCEEEEEEecCCCCcEEEEEEeCCCCCcEEEEEecCCCCcccCCceEEEECCCCCEEEEEEcCCcCccCCCEE
Confidence 35678899999999998655568999983 2 1121 124555542 234568999999999999999
Q ss_pred EEEecC----CceeEEEEEEEec--CCCCeeccCcceeCCCeeEEEEEEccCCc
Q psy12132 66 CQASNN----LGSSQQFIQLSGI--PNIPVFQKSSRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 66 C~~~~~----~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 113 (126)
|.+... .|.. ..+.+... +..|.... +.. ....+.|.|...+..|
T Consensus 89 Ca~~~~~~~~fG~G-T~L~V~~~~~~~~P~V~~-~~~-~~~~~tl~Cl~~gf~P 139 (200)
T 3rgv_A 89 CAANSGTYQRFGTG-TKLQVVPNIQNPDPAVYQ-LRD-SKSSDKSVCLFTDFDS 139 (200)
T ss_dssp EEEESSSCCCCCCC-EEEEEECCCSSCCCEEEE-EEE-SSSSSCEEEEEESCCT
T ss_pred EEeccCcccccCcC-EEEEEeCCCCCCCCeEEE-ccC-CCCCceEEEEcccccC
Confidence 998642 2222 23333321 22222211 111 1234689999977766
No 458
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=98.99 E-value=1.6e-09 Score=62.71 Aligned_cols=70 Identities=23% Similarity=0.386 Sum_probs=49.5
Q ss_pred CCccEEEEEEeeecCCC--eeEEEECCEEeccCCcE---EEEecC---CeEEEEEecCCCCCCEEEEEEEecCCceeE
Q psy12132 7 PDMRAEIICNVYANPPA--KVEWFRDGTAITLGGRI---DMHVSS---EKHSLLVRHIKDTDFGNYMCQASNNLGSSQ 76 (126)
Q Consensus 7 ~g~~~~l~C~~~~~p~~--~~~w~~~~~~~~~~~~~---~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 76 (126)
.|+.+.|.|.+.+.+++ .+.|++++..+...... ....++ ....|.|......|.|.|+|.+.+......
T Consensus 129 ~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~ 206 (212)
T 1q0x_L 129 STAKATLVCTITDFYPGVVTVDWKVDGTPVTAGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSSN 206 (212)
T ss_dssp TTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEEE
T ss_pred cCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCeecCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCccee
Confidence 58899999999875443 89999999887543111 111111 123688989888999999999999765433
No 459
>2h32_A Immunoglobulin IOTA chain; beta sheets, V and C-type IG folds, immune system; 2.70A {Homo sapiens}
Probab=98.99 E-value=1.4e-09 Score=58.45 Aligned_cols=74 Identities=12% Similarity=0.228 Sum_probs=52.3
Q ss_pred ceeccCCccEEEEEEeeec---CCCeeEEEECC-----EEe-c--c----------CCcEEEEe--cCCeEEEEEecCCC
Q psy12132 2 HSITAPDMRAEIICNVYAN---PPAKVEWFRDG-----TAI-T--L----------GGRIDMHV--SSEKHSLLVRHIKD 58 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~---p~~~~~w~~~~-----~~~-~--~----------~~~~~~~~--~~~~~~l~i~~~~~ 58 (126)
.+.+.+|+++.|.|...+. ....+.|++.. ..+ . . ..++.+.. ......|.|.+++.
T Consensus 9 ~v~v~~G~~vtL~C~~s~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~ 88 (126)
T 2h32_A 9 AMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQP 88 (126)
T ss_dssp EEEEETTCCEEEEEEECTTSCGGGCEEEEEEECTTSCCEEEEEEEETTEEEECTTCCTTEEEEEEGGGTEEEEEECSCCG
T ss_pred CEEECCCCCEEEEEEecCCCccccceEEEEEECCCCCCEEEEEEECCCCEEeCCCCCCCEEEEEeCCCCeEEEEECCCCh
Confidence 3567889999999998754 24579998742 111 1 0 23565552 33457899999999
Q ss_pred CCCEEEEEEEecCCcee
Q psy12132 59 TDFGNYMCQASNNLGSS 75 (126)
Q Consensus 59 ~d~g~y~C~~~~~~~~~ 75 (126)
.|+|.|.|.+.+..+..
T Consensus 89 ~DsG~Y~C~~~~~~~~~ 105 (126)
T 2h32_A 89 EDEAMYYCAMGARSSEK 105 (126)
T ss_dssp GGCEEEEEEEECSCCCC
T ss_pred hHCEEEEEEEEcCCCCc
Confidence 99999999988765433
No 460
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=98.99 E-value=8.7e-10 Score=64.28 Aligned_cols=81 Identities=14% Similarity=0.182 Sum_probs=55.7
Q ss_pred cCCccE-EEEEEee-ecCCCeeEEEECCEEeccCCcEEEEecC---CeEEEEEecCCCCCCEEEEEEEecCCceeEEEEE
Q psy12132 6 APDMRA-EIICNVY-ANPPAKVEWFRDGTAITLGGRIDMHVSS---EKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQ 80 (126)
Q Consensus 6 ~~g~~~-~l~C~~~-~~p~~~~~w~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 80 (126)
..|+.+ .|.|.+. +.|.|.+.|++++..............+ ....|.|..+...|.|.|+|.+.|..+.....+.
T Consensus 128 ~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~~~ 207 (221)
T 3eow_R 128 LTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQTSQVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQLLT 207 (221)
T ss_dssp CCSSSCCEEEEEEESCSSCCCEEEECSSSCCCCCEEECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCEEEE
T ss_pred cCCceEEEEEEECCCccCCCeeEEEeCCCCCCccceeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCeEEE
Confidence 456777 5999987 8899999999864322111110000111 1347999999999999999999999887777777
Q ss_pred EEecCC
Q psy12132 81 LSGIPN 86 (126)
Q Consensus 81 l~~~~~ 86 (126)
+...+.
T Consensus 208 v~~~~~ 213 (221)
T 3eow_R 208 VSLTVY 213 (221)
T ss_dssp ECCCCC
T ss_pred EEEEEE
Confidence 765543
No 461
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=98.98 E-value=1.9e-09 Score=62.65 Aligned_cols=70 Identities=19% Similarity=0.260 Sum_probs=49.2
Q ss_pred CCccEEEEEEeee-cCCC-eeEEEECCEEeccCCcEE--EEe--cCC---eEEEEEecCCCCCCEEEEEEEecCCceeE
Q psy12132 7 PDMRAEIICNVYA-NPPA-KVEWFRDGTAITLGGRID--MHV--SSE---KHSLLVRHIKDTDFGNYMCQASNNLGSSQ 76 (126)
Q Consensus 7 ~g~~~~l~C~~~~-~p~~-~~~w~~~~~~~~~~~~~~--~~~--~~~---~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 76 (126)
.|+.+.|.|.+.+ .|.+ .+.|++++..+....... ... ++. .+.|.|..+...|.|.|+|.+.|......
T Consensus 128 ~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~ 206 (216)
T 2xzc_L 128 KSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSP 206 (216)
T ss_dssp HTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSC
T ss_pred cCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEecCcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCCc
Confidence 4789999999987 4554 899999998765430110 111 111 13688999999999999999999764433
No 462
>2i24_N NEW antigen receptor PBLA8; immunoglobulin fold, immune system; 1.35A {Ginglymostoma cirratum} PDB: 2i25_N 2i27_N 2i26_N
Probab=98.98 E-value=5.4e-09 Score=55.79 Aligned_cols=69 Identities=25% Similarity=0.404 Sum_probs=50.3
Q ss_pred ceeccCCccEEEEEEeeecC--CCeeEEEECC--E----EeccCCcEEEEe--cCCeEEEEEecCCCCCCEEEEEEEec
Q psy12132 2 HSITAPDMRAEIICNVYANP--PAKVEWFRDG--T----AITLGGRIDMHV--SSEKHSLLVRHIKDTDFGNYMCQASN 70 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p--~~~~~w~~~~--~----~~~~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C~~~~ 70 (126)
.+.+.+|++++|.|.+.+.. .+.+.|++.. . .+....++.... ......|.|.+++..|+|.|.|.+..
T Consensus 9 ~v~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 87 (121)
T 2i24_N 9 RITKETGESLTINCVVRDSRCVLSTGYWYRKPPGSRNEESISDGGRYVETVNRGSKSFSLRINDLTVKDSGTYRCKPES 87 (121)
T ss_dssp EEEEETTCCEEEEEEECSCCCCEEEEEEEEECTTCSCCEEECSBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred EEEEecCCcEEEEeEccCCCCCCCEEEEEEeCCCCCceeeEecCCCeEEEecCCCCEEEEEECCCChhhCEEEEEEEec
Confidence 35778999999999997543 4579999843 1 222345665432 23467899999999999999998764
No 463
>2yz1_A Tyrosine-protein phosphatase non-receptor type substrate 1; beta-sandwich, structural genomics, NPPSFA; 1.40A {Mus musculus}
Probab=98.98 E-value=1.1e-09 Score=58.18 Aligned_cols=70 Identities=17% Similarity=0.304 Sum_probs=48.6
Q ss_pred ceeccCCccEEEEEEeeec-CCCeeEEEECCE----EeccC-----CcEEEE-----ecCCeEEEEEecCCCCCCEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYAN-PPAKVEWFRDGT----AITLG-----GRIDMH-----VSSEKHSLLVRHIKDTDFGNYMC 66 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~-p~~~~~w~~~~~----~~~~~-----~~~~~~-----~~~~~~~l~i~~~~~~d~g~y~C 66 (126)
.+.+.+|++++|.|.+.+. +.+.+.|++++. .+... .++... .......|.|.+++..|.|.|.|
T Consensus 16 ~~~~~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C 95 (120)
T 2yz1_A 16 SVSVAAGDSTVLNCTLTSLLPVGPIKWYRGVGQSRLLIYSFTGEHFPRVTNVSDATKRNNMDFSIRISNVTPEDAGTYYC 95 (120)
T ss_dssp EEEECTTCCEEECCEESCCCSCCCEEEEESSSTTCEEEEEECEECTTTCCSEEECCBSSTTBCCEEECSCCGGGCEEEEE
T ss_pred eEEEeCCCCEEEEeEECCCCCCcEEEEEcCCCCCcEEEEEcCCcccCcccceeeccccCCCeEEEEECCCCHHHCEEEEE
Confidence 3578899999999999765 567899999741 12110 112111 11223579999999999999999
Q ss_pred EEecC
Q psy12132 67 QASNN 71 (126)
Q Consensus 67 ~~~~~ 71 (126)
.+.+.
T Consensus 96 ~~~~~ 100 (120)
T 2yz1_A 96 VKFQK 100 (120)
T ss_dssp EEEEC
T ss_pred EEEcC
Confidence 98764
No 464
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=98.97 E-value=3.8e-10 Score=75.45 Aligned_cols=102 Identities=15% Similarity=0.101 Sum_probs=57.4
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCC-----ceeEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNL-----GSSQQ 77 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~-----~~~~~ 77 (126)
+.+..|+++.|.|.+.+ |.+++.|++++..+.......... ....|.|.+++..|.|.|.|.+.+.. +...+
T Consensus 543 v~v~~g~~~~L~C~~~s-p~a~v~W~~~~~~l~~~~~~~~~~--~~~~LlI~~v~~~DsG~Y~C~A~e~~~~~~~~~~~~ 619 (663)
T 1olz_A 543 HFFKHGGTAELKCSQKS-NLARVFWKFQNGVLKAESPKYGLM--GRKNLLIFNLSEGDSGVYQCLSEERVKNKTVFQVVA 619 (663)
T ss_dssp EEEETTSCEEECCCCSC-TTCEEEEEESSSBCCCCSSSBCCT--TTTCEEECSCCGGGCEEEEEEEEEECSSSEEEEEEE
T ss_pred EEEecCCcEEEEccCCC-CCCcEEEEECCeeccccCcceEEe--cCCeEEEEecCcccCeEEEEEEEECccCCCceEEEE
Confidence 56778999999999998 999999999987654322111111 12369999999999999999998873 22345
Q ss_pred EEEEEecCCCCeeccC----cceeCCCeeEEEEEE
Q psy12132 78 FIQLSGIPNIPVFQKS----SRRLGPDGYRLVWQV 108 (126)
Q Consensus 78 ~~~l~~~~~~~~~~~~----~~~~~~~~~~l~~~~ 108 (126)
.+.|.|.. +|.+... .....++.+.++|..
T Consensus 620 ~~~l~V~v-~P~~~~~p~~~~~~~~g~~~~~~~~~ 653 (663)
T 1olz_A 620 KHVLEVKV-VPKPVVAPTLSVVQTEGSRIATKVLV 653 (663)
T ss_dssp EEEEEEEC---------------------------
T ss_pred EEEEEEEe-CCccCCCCCChhhhhcCCceEEEeec
Confidence 55555543 3333221 222457778888866
No 465
>3c6l_A TCR 2W20 alpha chain; TCR-PMHC complex; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.52 E-value=5.7e-11 Score=67.94 Aligned_cols=116 Identities=15% Similarity=0.188 Sum_probs=68.9
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECC--E---Eec---------cCCcEEEEe--cCCeEEEEEecCCCCCCEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDG--T---AIT---------LGGRIDMHV--SSEKHSLLVRHIKDTDFGNYM 65 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~--~---~~~---------~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~ 65 (126)
.+.+.+|+++.|.|.+.+.+.+.+.|++.. . .+. ...++.... ......|.|.+++..|.|.|.
T Consensus 9 ~v~v~~G~svtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~R~s~~~~~~~~~~sL~I~~v~~~DsG~Y~ 88 (185)
T 3c6l_A 9 SLTVWEGETAILNCSYEDSTFDYFPWYHQFPGESPALLIAIRPVSNKKEDGRFTIFFNKREKKFSLHIADSQPGDSATYF 88 (185)
Confidence 356788999999999976666689999853 1 111 123444332 123458999999999999999
Q ss_pred EEEecC---CceeEEEEEEEe--cCCCCeeccCcceeCCCeeEEEEEEccCCcceeEEEEEE
Q psy12132 66 CQASNN---LGSSQQFIQLSG--IPNIPVFQKSSRRLGPDGYRLVWQVDTYSAIIQYLLKFR 122 (126)
Q Consensus 66 C~~~~~---~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~r 122 (126)
|.+.+. .|.. ..+.+.. .+..|...... .....+.|.|...+..|.. .|.|.
T Consensus 89 C~~~~~~~~fg~g-T~L~V~~~~~~~~P~V~~~~--~~~~~vtL~C~~~gf~P~p--~v~~~ 145 (185)
T 3c6l_A 89 CAASDNRIFFGDG-TQLVVKPNIQNPEPAVYQLK--DPRSQDSTLCLFTDFDSQI--NVPKT 145 (185)
Confidence 998652 1211 2222222 11222222111 1222789999998876533 45553
No 466
>2edo_A CD48 antigen; beta-sandwich, IG-fold, B-lymphocyte activation marker blast-1, BCM1 surface antigen, leukocyte antigen MEM-102, TCT.1; NMR {Homo sapiens}
Probab=98.97 E-value=3.9e-10 Score=60.22 Aligned_cols=82 Identities=15% Similarity=0.286 Sum_probs=54.4
Q ss_pred ceeccCCccEEEEEEe-eecCCCeeEEEECCE-Eecc-------------CCcEEEEecCCeEEEEEecCCCCCCEEEEE
Q psy12132 2 HSITAPDMRAEIICNV-YANPPAKVEWFRDGT-AITL-------------GGRIDMHVSSEKHSLLVRHIKDTDFGNYMC 66 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~-~~~p~~~~~w~~~~~-~~~~-------------~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 66 (126)
++.+.+|++++|.|.. .......+.|+++.. .+.. ..+..+. ..+.+|.|.+++..|+|.|.|
T Consensus 13 pv~~~~G~~VtL~c~~~~~~~~~~i~W~~~~~~~i~~~~~~~~~~~~~~f~~R~~l~--~~~~sL~I~nv~~~DsG~Y~c 90 (121)
T 2edo_A 13 HMTVVSGSNVTLNISESLPENYKQLTWFYTFDQKIVEWDSRKSKYFESKFKGRVRLD--PQSGALYISKVQKEDNSTYIM 90 (121)
T ss_dssp CCEEETTSCEEECCSSCCCSSEEEEEEEEETTEEEEEECSSCEEECSCTTTTTCEEC--TTTCCEEESSCCGGGCSEEEE
T ss_pred EEEEEeCCCEEEeCCCCCCCceeEEEEEcCCCCeEEEEECcCCeEeChhcCCcEEEe--CCCceEEEeCCCHHHCeEEEE
Confidence 4677899999999987 333345799998642 2210 1233222 123489999999999999999
Q ss_pred EEecCCc-eeEEEEEEEecC
Q psy12132 67 QASNNLG-SSQQFIQLSGIP 85 (126)
Q Consensus 67 ~~~~~~~-~~~~~~~l~~~~ 85 (126)
.+.+..+ .....+.|.|..
T Consensus 91 ~v~~~~~~~~~~~~~L~V~~ 110 (121)
T 2edo_A 91 RVLKKTGNEQEWKIKLQVLD 110 (121)
T ss_dssp EEEETTTEEEECCEECEEEC
T ss_pred EEEcCCCcEEEEEEEEEEEC
Confidence 9986543 345556666543
No 467
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=98.97 E-value=4.3e-09 Score=62.49 Aligned_cols=118 Identities=18% Similarity=0.208 Sum_probs=65.0
Q ss_pred ccCCccEEEEEEeeecC----CCeeEEEECCEEeccCCcE--EEEecCC---eEEEEEecCCCCCCEEEEEEEecCCcee
Q psy12132 5 TAPDMRAEIICNVYANP----PAKVEWFRDGTAITLGGRI--DMHVSSE---KHSLLVRHIKDTDFGNYMCQASNNLGSS 75 (126)
Q Consensus 5 ~~~g~~~~l~C~~~~~p----~~~~~w~~~~~~~~~~~~~--~~~~~~~---~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 75 (126)
+..|+.+.|.|.+.+.. ...+.|+++|..+...... ....++. ...|.|......|.|.|+|.+.+..+..
T Consensus 36 l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~~ 115 (240)
T 4acp_A 36 LMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPA 115 (240)
T ss_dssp HSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEECCCEEC---CEEEEEEEECCHHHHHHTCCEEEEEECC----
T ss_pred cccCCCcEEEEEEeccccCCCccEEEEEECCcccCCceeccceECCCCeEEEEEEEEEechhccCCCEEEEEEEcCCCCc
Confidence 34589999999999864 3379999999876432100 0111111 1356666666667889999999876533
Q ss_pred EEEEEEE--e-cCCCCeec-cCc--ceeCCCeeEEEEEEccCCcceeEEEEEEE
Q psy12132 76 QQFIQLS--G-IPNIPVFQ-KSS--RRLGPDGYRLVWQVDTYSAIIQYLLKFRE 123 (126)
Q Consensus 76 ~~~~~l~--~-~~~~~~~~-~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~r~ 123 (126)
.....+. . ...+|... ... ....+..+.|.|.+.+..|.. ..+.|.+
T Consensus 116 ~~~~~i~~~~~~~~~P~V~v~~~~~~~~~g~~~~L~C~~~gf~P~~-i~v~W~k 168 (240)
T 4acp_A 116 PIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSD-IAVEWES 168 (240)
T ss_dssp CEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSC-CEEEEEE
T ss_pred cccccccccCCCCCCCEEEEECCChHHhcCCceEEEEEEeEEeCCC-cEEEEEE
Confidence 2222222 1 12233222 211 122367899999997754422 2344444
No 468
>1fo0_A Protein (BM3.3 T cell receptor alpha-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_A*
Probab=98.97 E-value=3.1e-09 Score=56.21 Aligned_cols=69 Identities=10% Similarity=0.214 Sum_probs=50.6
Q ss_pred ceeccCCccEEEEEEeeec-CCCeeEEEECC--E---Eec----------cCCcEEEE--ecCCeEEEEEecCCCCCCEE
Q psy12132 2 HSITAPDMRAEIICNVYAN-PPAKVEWFRDG--T---AIT----------LGGRIDMH--VSSEKHSLLVRHIKDTDFGN 63 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~-p~~~~~w~~~~--~---~~~----------~~~~~~~~--~~~~~~~l~i~~~~~~d~g~ 63 (126)
.+.+.+|+++.|.|...+. +.+.+.|++.. . .+. ...++... .......|.|.+++..|+|.
T Consensus 9 ~~~~~~G~~vtL~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~ 88 (116)
T 1fo0_A 9 SISVMEKTTVTMDCVYETQDSSYFLFWYKQTASGEIVFLIRQDSYKKENATVGHYSLNFQKPKSSIGLIITATQIEDSAV 88 (116)
T ss_dssp EEEEETTCCEEECCEECCCCSSCEEEEEEECTTCCEEEEEEEETTCCSCCEETTEEEEEEGGGTEEEEEECSCCGGGCEE
T ss_pred cEEEecCCcEEEEeEecCCCCCeEEEEEEeCCCCCeEEEEEEccCCcCcccCCcEEEEEeCCCCEEEEEECCCChhhCEE
Confidence 3678899999999999765 55689998842 1 110 12455553 23345789999999999999
Q ss_pred EEEEEec
Q psy12132 64 YMCQASN 70 (126)
Q Consensus 64 y~C~~~~ 70 (126)
|.|.+.+
T Consensus 89 Y~C~~~~ 95 (116)
T 1fo0_A 89 YFCAMRG 95 (116)
T ss_dssp EEEEEEC
T ss_pred EEEEEEc
Confidence 9999876
No 469
>2nms_A CMRF35-like-molecule 1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, inhibitory receptor, myelo-monocytic cells; 2.60A {Homo sapiens}
Probab=98.97 E-value=5.6e-08 Score=52.01 Aligned_cols=84 Identities=12% Similarity=0.153 Sum_probs=57.4
Q ss_pred eeccCCccEEEEEEeeecCC-CeeEEEECCE-----E-ecc--------CCcEEEEec--CCeEEEEEecCCCCCCEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPP-AKVEWFRDGT-----A-ITL--------GGRIDMHVS--SEKHSLLVRHIKDTDFGNYM 65 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~-~~~~w~~~~~-----~-~~~--------~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~ 65 (126)
+.+.+|+++.|.|....... ..+.|++... . +.. ..++.+..+ .....|.|.+++..|.|.|.
T Consensus 12 v~~~~G~svtL~C~~s~~~~~~~~~W~rq~~~~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~l~~~Dsg~Y~ 91 (124)
T 2nms_A 12 VNGLERGSLTVQCVYRSGWETYLKWWCRGAIWRDCKILVKTSGSEQEVKRDRVSIKDNQKNRTFTVTMEDLMKTDADTYW 91 (124)
T ss_dssp EEEETTCCEEEEEEECTTCTTSEEEEEESSSSTTCEEEEECCSSSCCEEETTEEEEEETTTTEEEEEECSCCGGGCEEEE
T ss_pred EEEeCCCCEEEEeEEeCCcccccEEEEeCCCCCCceEEEEcCCcccceeCCCEEEEEcCcCCEEEEEEeCCCHHHCEEEE
Confidence 56788999999999865432 3689998531 1 111 135554432 34578999999999999999
Q ss_pred EEEecCCceeEEEEEEEecCC
Q psy12132 66 CQASNNLGSSQQFIQLSGIPN 86 (126)
Q Consensus 66 C~~~~~~~~~~~~~~l~~~~~ 86 (126)
|.+..........+.|.|.+.
T Consensus 92 C~~~~~~~~~~~~v~L~V~~~ 112 (124)
T 2nms_A 92 CGIEKTGNDLGVTVQVTIDPA 112 (124)
T ss_dssp EEEEETTEEEEEEEEEEEECC
T ss_pred EEEEcCCCCccEEEEEEEeCC
Confidence 998876444455666666543
No 470
>2q86_A Valpha14 TCR; INKT cells, TCR, glycolipid recognition, innate immunity, IM system; HET: NAG BMA MAN FUC; 1.85A {Mus musculus} PDB: 3quy_C* 3o9w_C* 3qux_C* 3o8x_C* 3quz_C* 3rtq_C* 3rzc_C* 3ta3_C* 3tvm_C* 3qi9_C* 3ard_C* 3are_C* 3arf_C* 3arg_C* 3he6_C* 3he7_C* 3arb_C* 3scm_C* 3sda_C* 3sdc_C* ...
Probab=98.97 E-value=1.2e-08 Score=60.14 Aligned_cols=69 Identities=16% Similarity=0.414 Sum_probs=50.2
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECC--E---Eec---------cCCcEEEEe--cCCeEEEEEecCCCCCCEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDG--T---AIT---------LGGRIDMHV--SSEKHSLLVRHIKDTDFGNYM 65 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~--~---~~~---------~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~ 65 (126)
.+.+.+|+++.|.|.+.+.....+.|++.. . .+. ...++.... ......|.|.+++..|.|.|.
T Consensus 10 ~v~v~~G~svtL~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~~Dsg~Y~ 89 (229)
T 2q86_A 10 SLVVRQGENCVLQCNYSVTPDNHLRWYKQDTGKGLVLLTVLVDQKDKTSNGRYSATLDKDAKHSTLHITATLLDDTATYF 89 (229)
T ss_dssp EEEEETTCCEEEEEEECCSCCSCEEEEEECTTCCEEEEEEECSSEEEEEETTEEEEEETTTTEEEEEECSCCGGGCEEEE
T ss_pred EEEEecCCCEEEEEEECCCCCcEEEEEEECCCCCcEEEEEEcCCCCcccCCCEEEEEcCCCCEEEEEEcccCcccCccEE
Confidence 356788999999999976666689998742 1 111 124555442 234568999999999999999
Q ss_pred EEEec
Q psy12132 66 CQASN 70 (126)
Q Consensus 66 C~~~~ 70 (126)
|.+.+
T Consensus 90 C~~~~ 94 (229)
T 2q86_A 90 CVVGD 94 (229)
T ss_dssp EEESC
T ss_pred EEEEe
Confidence 99875
No 471
>2atp_B T-cell surface glycoprotein CD8 beta chain; CD8AB, CD8AA, MHC, immune system; HET: NAG; 2.40A {Mus musculus} SCOP: b.1.1.1 PDB: 3b9k_B*
Probab=98.96 E-value=6.2e-09 Score=54.91 Aligned_cols=69 Identities=17% Similarity=0.298 Sum_probs=51.0
Q ss_pred ceeccCCccEEEEEEeeec-CCCeeEEEECCE--------Eec--------------cCCcEEEEe--cCCeEEEEEecC
Q psy12132 2 HSITAPDMRAEIICNVYAN-PPAKVEWFRDGT--------AIT--------------LGGRIDMHV--SSEKHSLLVRHI 56 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~-p~~~~~w~~~~~--------~~~--------------~~~~~~~~~--~~~~~~l~i~~~ 56 (126)
.+.+.+|++++|.|...+. +...+.|++... .+. ...++.+.. ......|.|.++
T Consensus 7 ~~~~~~G~~vtL~C~~~~~~~~~~v~W~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~ 86 (115)
T 2atp_B 7 SLLVQTNHTAKMSCEVKSISKLTSIYWLRERQDPKDKYFEFLASWSSSKGVLYGESVDKKRNIILESSDSRRPFLSIMNV 86 (115)
T ss_dssp EEEECTTSCEEEEEECCSSCCSSEEEEEEEEECSSCEEEEEEEEEETTTEEEECGGGTTTCCEEEESTTSSSCEEEECSC
T ss_pred CEEEcCCCcEEEEEEecCCCCcccEEEEEeCCCCCCCccEEEEEEeCCCCeEecCCCccCcEEEEEeCCCCEEEEEECCC
Confidence 3678899999999999754 456899987431 110 124666554 344568999999
Q ss_pred CCCCCEEEEEEEec
Q psy12132 57 KDTDFGNYMCQASN 70 (126)
Q Consensus 57 ~~~d~g~y~C~~~~ 70 (126)
+..|+|.|.|.+..
T Consensus 87 ~~~DsG~Y~C~~~~ 100 (115)
T 2atp_B 87 KPEDSDFYFCATVG 100 (115)
T ss_dssp CGGGCEEEEEEEEC
T ss_pred CHHHCEEEEEeEcc
Confidence 99999999998875
No 472
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=98.96 E-value=3e-09 Score=61.75 Aligned_cols=72 Identities=18% Similarity=0.366 Sum_probs=47.5
Q ss_pred CCccEEEEEEeee-cCCC-eeEEEECCEEeccCCcE-E-EEecCC---eEEEEEecCCCCCCEEEEEEEecCCceeEEE
Q psy12132 7 PDMRAEIICNVYA-NPPA-KVEWFRDGTAITLGGRI-D-MHVSSE---KHSLLVRHIKDTDFGNYMCQASNNLGSSQQF 78 (126)
Q Consensus 7 ~g~~~~l~C~~~~-~p~~-~~~w~~~~~~~~~~~~~-~-~~~~~~---~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~ 78 (126)
.|+.+.|.|.+.+ .|.+ .+.|++++..+...... . ...++. ...|.+......|.|.|+|.+.|..+.....
T Consensus 135 ~~~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 213 (218)
T 3s96_B 135 KENKATLVCLISNFSPSGVTVAWKANGTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEKS 213 (218)
T ss_dssp HTTEEEEEEEEEEEBSSCCEEEEEETTEEC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEEEE
T ss_pred cCCcEEEEEEECcccCCCeEEEEEECCEECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCccccc
Confidence 4678999999987 5666 89999999887542111 0 011111 1247788888888999999999987655544
No 473
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.95 E-value=5.7e-09 Score=61.47 Aligned_cols=68 Identities=13% Similarity=0.376 Sum_probs=50.0
Q ss_pred eeccCCccEEEEEEeeecC--CCeeEEEEC--CEEe------c-----------cCCcEEEEec--CCeEEEEEecCCCC
Q psy12132 3 SITAPDMRAEIICNVYANP--PAKVEWFRD--GTAI------T-----------LGGRIDMHVS--SEKHSLLVRHIKDT 59 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p--~~~~~w~~~--~~~~------~-----------~~~~~~~~~~--~~~~~l~i~~~~~~ 59 (126)
+.+.+|+++.|.|.+.+.| .+.+.|+++ +..+ . ...++....+ .....|.|.+++..
T Consensus 129 ~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~ 208 (240)
T 1moe_A 129 ELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSE 208 (240)
T ss_dssp EEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred eEEeCCCcEEEEEEEcCccCCCCEEEEEEECCCCCcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHH
Confidence 4567899999999999877 358999985 2111 0 1235554432 33468999999999
Q ss_pred CCEEEEEEEec
Q psy12132 60 DFGNYMCQASN 70 (126)
Q Consensus 60 d~g~y~C~~~~ 70 (126)
|.|.|.|.+..
T Consensus 209 D~G~Y~C~a~~ 219 (240)
T 1moe_A 209 DTAVYYCAPFG 219 (240)
T ss_dssp GCEEEEEEECS
T ss_pred HCEEEEEEEEe
Confidence 99999999985
No 474
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=98.95 E-value=1.6e-08 Score=65.76 Aligned_cols=113 Identities=9% Similarity=-0.002 Sum_probs=71.8
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQL 81 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 81 (126)
+..+..|+++.|.|.+. .+.+.|++++..+... + .++....|.|.++...|.|.|.|.+.+........+.+
T Consensus 212 ~~~v~~Gs~vtl~C~a~---~~~I~W~~ng~~i~~~-r----i~~~~~~L~I~nl~~sd~g~y~~~C~~~~~i~~~~l~v 283 (488)
T 2q7n_A 212 DKVVLAGSNMTICCMSP---TKVLSGQIGNTLRPLI-H----LYGQTVAIHILNIPVSENSGTNIIFITDDDVYGTVVFA 283 (488)
T ss_dssp TCEEESSCCCEEEECCS---SCEEEEEETTEECCCE-E----CSSSCEEEECCSCCCCCSSCEEEEEEESSCEEEEEEEE
T ss_pred CCEEcCCCCEEEEEECC---CCEEEEEECCEECchh-h----ccceEEEEEEeCCCcccCCcEEEEEEcCCeEEEEEEEe
Confidence 34578899999999987 4699999999776532 1 23345689999999988887777665322222233333
Q ss_pred EecCCCCeeccCcceeCCCeeEEEEEEccC-----CcceeEEEEEEE
Q psy12132 82 SGIPNIPVFQKSSRRLGPDGYRLVWQVDTY-----SAIIQYLLKFRE 123 (126)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~r~ 123 (126)
...+.+|.... -.......+.++|.+... .+...|.+.|+.
T Consensus 284 ~~pP~~P~nl~-C~~~~~~svtcsW~pg~~~~l~G~~~t~Y~L~y~~ 329 (488)
T 2q7n_A 284 GYPPDVPQKLS-CETHDLKEIICSWNPGRITGLVGPRNTEYTLFESI 329 (488)
T ss_dssp ECCCCCCCSCE-EEBSSSSEEEEEECCCSCCCCCTTSSCEEEEEETT
T ss_pred eCCCCCCcccE-EEEcCCCEEEEEEeCCCcCCCCCCCceeEEEEEEE
Confidence 33333333221 111245678899988332 256789998864
No 475
>1p4b_L Antibody variable light chain; FV antibody, antigen peptide binder, SCFV, picomolar binder, immune system; 2.35A {Mus musculus} SCOP: b.1.1.1 PDB: 1p4i_L
Probab=98.94 E-value=7.4e-09 Score=56.29 Aligned_cols=69 Identities=16% Similarity=0.332 Sum_probs=51.4
Q ss_pred eeccCCccEEEEEEeeecC---CCeeEEEECC-----EEec---------cCCcEEEEecCCeEEEEEecCCCCCCEEEE
Q psy12132 3 SITAPDMRAEIICNVYANP---PAKVEWFRDG-----TAIT---------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYM 65 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p---~~~~~w~~~~-----~~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~ 65 (126)
+.+.+|++++|.|.+...+ .+.+.|++.. ..+. ...++..........|.|.+++..|.|.|.
T Consensus 15 v~v~~G~~vtL~C~~~~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rf~~~~~~~~~sL~I~~v~~~DsG~Y~ 94 (135)
T 1p4b_L 15 LTTSPGETVTLTCRSSTGAVTTSNYASWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAIYF 94 (135)
T ss_dssp EEECTTCEEEEEEEETTSSCCGGGCCEEEEEEGGGEEEEEEETTTEECTTCCTTEEEEEETTEEEEEEESCCGGGCEEEE
T ss_pred EEEcCCCCEEEEEEecCCCcCCCCEEEEEEECCCCCCEEEEEeCCccCCCCCCCEEEEcCCCEEEEEECCCChhHCEEEE
Confidence 5678999999999997554 4679998742 1111 124666554445678999999999999999
Q ss_pred EEEecC
Q psy12132 66 CQASNN 71 (126)
Q Consensus 66 C~~~~~ 71 (126)
|.+.+.
T Consensus 95 C~~~~~ 100 (135)
T 1p4b_L 95 CALWYS 100 (135)
T ss_dssp EEEECS
T ss_pred EEEecC
Confidence 998764
No 476
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.94 E-value=3e-09 Score=63.78 Aligned_cols=78 Identities=14% Similarity=0.088 Sum_probs=52.1
Q ss_pred eccCCccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEec-CCeEEEEEecCCCCCCEEEEEEEecCCc-----eeEE
Q psy12132 4 ITAPDMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVS-SEKHSLLVRHIKDTDFGNYMCQASNNLG-----SSQQ 77 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~g~y~C~~~~~~~-----~~~~ 77 (126)
.+.+|++++|.|.+.+. .+.+.|+|++..+........... .....|.|.++. |.|.|+|.+.+... ..+.
T Consensus 117 ~V~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~ 193 (257)
T 1b6u_A 117 TVLAGESVTLSCSSRSS-YDMYHLSREGEAHERRFSAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSD 193 (257)
T ss_dssp TCBTTCEEEEEEECSSC-CSEEEEEETTSSCEECCBCBCCSSSCCBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCCC
T ss_pred ccCCCCEEEEEEeCCCC-CcEEEEEECCcccCcccccccccCCceeEEEEecccc--cCEEEEEEEEcCCCCcccccCCC
Confidence 35789999999999765 478999999876543221111111 124589999998 99999999986421 2234
Q ss_pred EEEEEec
Q psy12132 78 FIQLSGI 84 (126)
Q Consensus 78 ~~~l~~~ 84 (126)
.+.|.|.
T Consensus 194 pl~L~V~ 200 (257)
T 1b6u_A 194 PLLVSVT 200 (257)
T ss_dssp CEEECCB
T ss_pred CEEEEEe
Confidence 4555554
No 477
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=98.94 E-value=4.4e-09 Score=62.29 Aligned_cols=78 Identities=10% Similarity=0.170 Sum_probs=45.6
Q ss_pred cCCccEEEEEEeee-cCCC-eeEEEECCEEeccC------C---cEEEEecCC---eEEEEEecCCCCCCEEEEEEEecC
Q psy12132 6 APDMRAEIICNVYA-NPPA-KVEWFRDGTAITLG------G---RIDMHVSSE---KHSLLVRHIKDTDFGNYMCQASNN 71 (126)
Q Consensus 6 ~~g~~~~l~C~~~~-~p~~-~~~w~~~~~~~~~~------~---~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~~~~~ 71 (126)
..|+.+.|.|.+.+ .|.+ .+.|++++..+... . ......++. ...|.+......|.|.|+|.+.|.
T Consensus 131 ~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~ 210 (248)
T 3pv7_A 131 MKENEDKYMCESSGFYPEAINITWEKQTQKFPHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHA 210 (248)
T ss_dssp -----CEEEEEEEEEBSSCCEEEEEEECSSSCSCEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECT
T ss_pred ccCCCcEEEEEEccEECCCeEEEEEECCccCCCccccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECC
Confidence 45677889999998 7888 99999988532211 0 000011111 236788888888999999999998
Q ss_pred CceeEE--EEEEEe
Q psy12132 72 LGSSQQ--FIQLSG 83 (126)
Q Consensus 72 ~~~~~~--~~~l~~ 83 (126)
.+.... .+.|.+
T Consensus 211 ~~~~~~~~~v~l~V 224 (248)
T 3pv7_A 211 SLHTPLRSNFTLTA 224 (248)
T ss_dssp TCSSCEEEEECC--
T ss_pred CCCCCcEEEEEEEE
Confidence 776443 444444
No 478
>3bp6_A Programmed cell death protein 1; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3rnk_A 3sbw_A 3bp5_A 1npu_A 3rnq_A
Probab=98.93 E-value=4.8e-08 Score=51.68 Aligned_cols=70 Identities=14% Similarity=0.255 Sum_probs=51.0
Q ss_pred ceeccCCccEEEEEEeeecC-CCeeEEEEC--CE---Eec----------cCCcEEEEe--cCCeEEEEEecCCCCCCEE
Q psy12132 2 HSITAPDMRAEIICNVYANP-PAKVEWFRD--GT---AIT----------LGGRIDMHV--SSEKHSLLVRHIKDTDFGN 63 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p-~~~~~w~~~--~~---~~~----------~~~~~~~~~--~~~~~~l~i~~~~~~d~g~ 63 (126)
.+.+.+|++++|.|...... ...+.|++. +. .+. ...++.... ......|.|.+++..|+|.
T Consensus 8 ~~~v~~G~~vtL~C~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~ 87 (117)
T 3bp6_A 8 WLTVSEGANATFTCSLSNWSEDLMLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQLPNRHDFHMNILDTRRNDSGI 87 (117)
T ss_dssp EEEECTTCCEEEEEEESSCCTTCEEEEEEECTTCCEEEEEEEETTEEEESSCTTEEEEECTTSSEEEEEESSCCGGGCEE
T ss_pred cEEEeCCCCEEEEeEeecCCCCCEEEEEEeCCCCCceEEEEECCCCccccccCcEEEEEcCCCCEEEEEECcCCHHHCEE
Confidence 35688999999999997543 468999984 21 111 134666543 3456789999999999999
Q ss_pred EEEEEecC
Q psy12132 64 YMCQASNN 71 (126)
Q Consensus 64 y~C~~~~~ 71 (126)
|.|.+.+.
T Consensus 88 Y~C~~~~~ 95 (117)
T 3bp6_A 88 YLCGAISL 95 (117)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEec
Confidence 99998764
No 479
>3t0v_A Immunoglobulin variable lambda domain; immunoglobulin fold, fluorogen activation, dimethylindole RE binding protein; HET: 1PE PE3; 1.45A {Homo sapiens} PDB: 3t0w_A* 3t0x_A* 3lrg_A 3lrh_A 2rhe_A
Probab=98.93 E-value=1.4e-08 Score=54.37 Aligned_cols=70 Identities=19% Similarity=0.421 Sum_probs=52.0
Q ss_pred ceeccCCccEEEEEEeeecC--CCeeEEEEC--C---EEec---------cCCcEEEEecCCeEEEEEecCCCCCCEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANP--PAKVEWFRD--G---TAIT---------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYM 65 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p--~~~~~w~~~--~---~~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~ 65 (126)
.+.+.+|++++|.|...+.+ ...+.|++. + ..+. ...++..........|.|.+++..|+|.|.
T Consensus 9 ~v~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~sL~I~~l~~~DsG~Y~ 88 (123)
T 3t0v_A 9 SVSGTPGQKVTIFCSGSSSNVEDNSVYWYQQFPGTTPKVLIYNDDRRSSGVPDRFSGSKSGTSASLAISGLRSEDEADYY 88 (123)
T ss_dssp CEEECTTCCEEEEEECCTTTTTTSCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGCEEEE
T ss_pred eEEEcCCCCEEEEEecCCCccCCCeEEEEEECCCCCCEEEEEECCcCCCCCcCCEEEEccCCEEEEEECCCCHHHCEEEE
Confidence 46788999999999997653 367999983 2 1121 124666554455679999999999999999
Q ss_pred EEEecC
Q psy12132 66 CQASNN 71 (126)
Q Consensus 66 C~~~~~ 71 (126)
|.+.+.
T Consensus 89 C~~~~~ 94 (123)
T 3t0v_A 89 CLSWDD 94 (123)
T ss_dssp EEEEET
T ss_pred EEEEcC
Confidence 998764
No 480
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=98.93 E-value=7.9e-09 Score=59.78 Aligned_cols=65 Identities=20% Similarity=0.325 Sum_probs=47.7
Q ss_pred ccCCccEEEEEEeee-cCCCeeEEEECCEEeccCCcEEE--E--ecC---CeEEEEEecCCCCCCEEEEEEEe
Q psy12132 5 TAPDMRAEIICNVYA-NPPAKVEWFRDGTAITLGGRIDM--H--VSS---EKHSLLVRHIKDTDFGNYMCQAS 69 (126)
Q Consensus 5 ~~~g~~~~l~C~~~~-~p~~~~~w~~~~~~~~~~~~~~~--~--~~~---~~~~l~i~~~~~~d~g~y~C~~~ 69 (126)
+..|+.+.|.|.+.+ .|.+.+.|++++..+........ . .++ ....|.|..+...|.|.|+|.+.
T Consensus 126 ~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 126 LVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTGIENSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp HHTTSEEEEEEEEEEEBSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred hccCCcEeEEEEEecccCCcEEEEEeCCccCCCCeecccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 345889999999988 89899999999987753210000 0 001 11368999999999999999998
No 481
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=98.93 E-value=9.2e-09 Score=60.91 Aligned_cols=68 Identities=18% Similarity=0.473 Sum_probs=50.2
Q ss_pred eccCCccEEEEEEeeecC--CCeeEEEECC--EE---e---c-----------cCCcEEEEe--cCCeEEEEEecCCCCC
Q psy12132 4 ITAPDMRAEIICNVYANP--PAKVEWFRDG--TA---I---T-----------LGGRIDMHV--SSEKHSLLVRHIKDTD 60 (126)
Q Consensus 4 ~~~~g~~~~l~C~~~~~p--~~~~~w~~~~--~~---~---~-----------~~~~~~~~~--~~~~~~l~i~~~~~~d 60 (126)
.+.+|+++.|.|.+.+.+ .+.+.|++++ .. + . ...++.+.. ......|.|.+++..|
T Consensus 138 ~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 217 (247)
T 1svz_A 138 LKKPGETVKISCKATNYAFTDYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNED 217 (247)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGG
T ss_pred eecCCCcEEEEEEEcCcccCCcEEEEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhH
Confidence 477899999999998775 5689999852 11 1 0 124555443 2335689999999999
Q ss_pred CEEEEEEEecC
Q psy12132 61 FGNYMCQASNN 71 (126)
Q Consensus 61 ~g~y~C~~~~~ 71 (126)
.|.|.|.+.+.
T Consensus 218 sG~Y~C~a~n~ 228 (247)
T 1svz_A 218 TATYFCVRDRH 228 (247)
T ss_dssp CEEEEEEEEEG
T ss_pred CEEEEEEEecc
Confidence 99999999884
No 482
>4ei6_A Valpha1 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_C 4elk_A 4elm_E* 3qeu_A 1ao7_D 3qdj_D 3qdg_D 3qfj_D 1qsf_D 1qse_D* 3d39_D* 3d3v_D* 3h9s_D 3pwp_D 2gj6_D 3utp_D* 3uts_D 1qrn_D 3hg1_D 3rdt_A ...
Probab=98.92 E-value=8e-09 Score=60.04 Aligned_cols=68 Identities=25% Similarity=0.363 Sum_probs=48.2
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECC-----EEec--------cCCcEEEEe--cCCeEEEEEecCCCCCCEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDG-----TAIT--------LGGRIDMHV--SSEKHSLLVRHIKDTDFGNYMCQ 67 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~-----~~~~--------~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C~ 67 (126)
+.+.+|+++.|.|...+.....+.|++.. ..+. ...|+.... ......|.|.+++..|+|.|.|.
T Consensus 12 v~v~~G~sVtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~lq~~DsG~Y~Ca 91 (208)
T 4ei6_A 12 LSVPEGGMASLNCTSSDRNFQYFWWYRQHSGEGPKALMSIFSDGDKKEGRFTAHLNKASLHVSLHIRDSQPSDSALYFCA 91 (208)
T ss_dssp EEEETTCCEECEEEECCTTEEEEEEEEECTTSCCEEEEECCSSEEEEETTEEEEEBTTTTBC-CEECSCCGGGCEEEEEE
T ss_pred EEEECCCCEEEEEEEcCCCCceEEEEEeCCCCCcEEEEEECCCCcccCCcEEEEEcCCCCEEEEEEEeCcccCCCcEEEE
Confidence 56788999999999976545578999742 1111 124555542 23456899999999999999998
Q ss_pred Eec
Q psy12132 68 ASN 70 (126)
Q Consensus 68 ~~~ 70 (126)
+..
T Consensus 92 ~~~ 94 (208)
T 4ei6_A 92 ASE 94 (208)
T ss_dssp EEE
T ss_pred Eec
Confidence 764
No 483
>3qjh_A 5C.C7 alpha chain; immunoglobulin domain, T cell receptor, immune system; 1.90A {Mus musculus} PDB: 3qiu_C* 3qiw_C* 3qjf_A 3qib_C 2ial_A 2iam_C 2ian_D 4e41_D 4e42_A 3rug_E* 3axl_A
Probab=98.92 E-value=1.8e-08 Score=58.47 Aligned_cols=108 Identities=19% Similarity=0.303 Sum_probs=64.6
Q ss_pred eeccCCccEEEEEEeeecCCCeeEEEECC--E---Eec-------cCCcEEEEe--cCCeEEEEEecCCCCCCEEEEEEE
Q psy12132 3 SITAPDMRAEIICNVYANPPAKVEWFRDG--T---AIT-------LGGRIDMHV--SSEKHSLLVRHIKDTDFGNYMCQA 68 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p~~~~~w~~~~--~---~~~-------~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C~~ 68 (126)
+.+.+|+++.|.|.+.+. ...+.|++.. . .+. ...|+.... ......|.|.+++..|.|.|.|.+
T Consensus 13 v~v~~G~svtL~C~~s~~-~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~l~~~DsG~Y~Cav 91 (205)
T 3qjh_A 13 LSLHEGTGSALRCNFTTT-MRAVQWFRKNSRGSLINLFYLASGTKENGRLKSAFDSKERYSTLHIRDAQLEDSGTYFCAA 91 (205)
T ss_dssp EEEETTCCEEEEEECSSC-EEEEEEEEEC-CCCEEEEEEESSEEEEETTEEEEEETTTTEEEEEECSCCGGGCEEEEEEE
T ss_pred EEEeCCCCEEEEEEEECC-cceEEEEEECCCCCcEEEEEECCCCccCCCEEEEEcCCCCEEEEEEeccccccCeEEEEEE
Confidence 567889999999998765 5679999842 1 111 134555542 334678999999999999999998
Q ss_pred ecCC-ce--eEEEEEEEecC----CCCeeccCcceeCCCeeEEEEEEccCCc
Q psy12132 69 SNNL-GS--SQQFIQLSGIP----NIPVFQKSSRRLGPDGYRLVWQVDTYSA 113 (126)
Q Consensus 69 ~~~~-~~--~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 113 (126)
.... +. ...-..|.|.+ +.|.... +.. ....+.|.|...+..|
T Consensus 92 ~~~~~~~~~fG~GT~L~V~~~~~~~~p~V~~-l~~-~~~~~tl~Cl~~~f~P 141 (205)
T 3qjh_A 92 EASNTNKVVFGTGTRLQVLPNIQNPDPAVYQ-LRD-SKSSDKSVCLFTDFDS 141 (205)
T ss_dssp EETTTCCEEEBCCEEEEEECCCSSCCCEEEE-EEB-CC--CCEEEEEESCCT
T ss_pred EcCCCCccccCCCEEEEEeCcccCCCCEEEE-ecc-cCCCcEEEEEEEcccc
Confidence 7321 11 11112333322 2222211 111 1234789999877665
No 484
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=98.92 E-value=2.1e-08 Score=59.38 Aligned_cols=69 Identities=19% Similarity=0.398 Sum_probs=50.6
Q ss_pred eeccCCccEEEEEEeeecC--CCeeEEEEC--CEEe---c-------------cCCcEEEEec--CCeEEEEEecCCCCC
Q psy12132 3 SITAPDMRAEIICNVYANP--PAKVEWFRD--GTAI---T-------------LGGRIDMHVS--SEKHSLLVRHIKDTD 60 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p--~~~~~w~~~--~~~~---~-------------~~~~~~~~~~--~~~~~l~i~~~~~~d 60 (126)
..+.+|+++.|.|.+.+.+ .+.+.|+++ +..+ . ...++.+..+ .....|.|.+++..|
T Consensus 132 ~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 211 (242)
T 2znx_A 132 SLVKPSQTLSLTCSVTGDSITSDYXSXIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTED 211 (242)
T ss_dssp SEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGG
T ss_pred ceecCCCeEEEEEEEEccccCCcceeeEeeCCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCc
Confidence 3467899999999998775 478999984 2211 0 1345555432 234689999999999
Q ss_pred CEEEEEEEecC
Q psy12132 61 FGNYMCQASNN 71 (126)
Q Consensus 61 ~g~y~C~~~~~ 71 (126)
.|.|.|.+.+.
T Consensus 212 ~G~Y~C~a~~~ 222 (242)
T 2znx_A 212 TATYYCANXDG 222 (242)
T ss_dssp CEEEEEEETTS
T ss_pred CEEEEEeccCC
Confidence 99999999873
No 485
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=98.92 E-value=2.8e-08 Score=58.15 Aligned_cols=74 Identities=11% Similarity=0.222 Sum_probs=50.2
Q ss_pred cCCccEEEEEEeeec-CCC-eeEEEE-CCEEeccCCcE-EEEecC---CeEEEEEecCCC--CCCEEEEEEEecCCceeE
Q psy12132 6 APDMRAEIICNVYAN-PPA-KVEWFR-DGTAITLGGRI-DMHVSS---EKHSLLVRHIKD--TDFGNYMCQASNNLGSSQ 76 (126)
Q Consensus 6 ~~g~~~~l~C~~~~~-p~~-~~~w~~-~~~~~~~~~~~-~~~~~~---~~~~l~i~~~~~--~d~g~y~C~~~~~~~~~~ 76 (126)
..|+.+.|.|.+.+. |.+ .+.|++ ++..+...... .....+ ....|.|..... .|.|.|+|.+.+..+...
T Consensus 139 ~~g~~v~L~C~~~g~~P~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~ 218 (223)
T 1dee_B 139 NPSSTVAVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKE 218 (223)
T ss_dssp CSSSEEEEEEEEEEEBSSCCEEEEEETTSCBCSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCCEE
T ss_pred CCCCcEEEEEEEEEEeCCCeEEEeEccCCCccceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCCCc
Confidence 478899999999877 766 999999 88765420000 000111 123678877765 788999999999887665
Q ss_pred EEE
Q psy12132 77 QFI 79 (126)
Q Consensus 77 ~~~ 79 (126)
...
T Consensus 219 ~~~ 221 (223)
T 1dee_B 219 KDV 221 (223)
T ss_dssp EEE
T ss_pred ccc
Confidence 443
No 486
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=98.92 E-value=1.4e-09 Score=62.97 Aligned_cols=72 Identities=14% Similarity=0.143 Sum_probs=49.6
Q ss_pred ccCCccEEEEEEeeec-CCC-eeEEEECCEEeccCCcEEEEecC---CeEEEEEecCCCCCCEEEEEEEecCCceeEE
Q psy12132 5 TAPDMRAEIICNVYAN-PPA-KVEWFRDGTAITLGGRIDMHVSS---EKHSLLVRHIKDTDFGNYMCQASNNLGSSQQ 77 (126)
Q Consensus 5 ~~~g~~~~l~C~~~~~-p~~-~~~w~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 77 (126)
+..|+.+.|.|.+.+. |.| .+.|++++..+...........+ ....|.|..+..+| |.|+|.+.|..+....
T Consensus 130 ~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~ 206 (210)
T 3d9a_H 130 AQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKV 206 (210)
T ss_dssp CCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEE
T ss_pred cccCCcEEEEEEEeeEecCCcEEEEeeCCcccceEEcCCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccc
Confidence 3578999999999887 878 99999987643211000011111 12368898888767 9999999998776543
No 487
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=98.92 E-value=1.7e-09 Score=62.90 Aligned_cols=74 Identities=14% Similarity=0.102 Sum_probs=48.1
Q ss_pred ccCCccEEEEEEeee-cCCC-eeEEEECCEEeccCCcEEEEecCC---eEEEEEecCCCCCCEEEEEEEecCCceeEEEE
Q psy12132 5 TAPDMRAEIICNVYA-NPPA-KVEWFRDGTAITLGGRIDMHVSSE---KHSLLVRHIKDTDFGNYMCQASNNLGSSQQFI 79 (126)
Q Consensus 5 ~~~g~~~~l~C~~~~-~p~~-~~~w~~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 79 (126)
+..|+.+.|.|.+.+ .|.| .+.|++++..+...........+. ...|.|..... |.|.|+|.+.|..+......
T Consensus 136 ~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-d~g~Y~C~a~n~~~~~~~~~ 214 (219)
T 1c1e_H 136 AQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPR-PSETVTCNVAHPASSTKVDK 214 (219)
T ss_dssp SCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEESSSCEEEEEEEEEESSST-TTSCCEEEEEEGGGTEEEEE
T ss_pred cccCCeEEEEEEcccccCCCeEEEEEeCCcccceEecCCcccCCeEEEEEEEEEecccC-CCCEEEEEEEeCCCCccEEE
Confidence 457999999999998 8888 999999886532110000011111 13688855444 56999999999876554433
No 488
>2z35_A T-cell receptor alpha-chain; immune receptor, immune system; 2.20A {Mus musculus} PDB: 2pxy_A 2z31_A 1ac6_A
Probab=98.91 E-value=7.9e-09 Score=54.28 Aligned_cols=68 Identities=15% Similarity=0.220 Sum_probs=49.9
Q ss_pred ceeccCCccEEEEEEeeecCCCeeEEEECC-----EEec---------cCCcEEEEe--cCCeEEEEEecCCCCCCEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPAKVEWFRDG-----TAIT---------LGGRIDMHV--SSEKHSLLVRHIKDTDFGNYM 65 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~~~~w~~~~-----~~~~---------~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~ 65 (126)
.+.+.+|++++|.|.+.+.+.+.+.|++.. ..+. ...++.... ......|.|.+++..|+|.|.
T Consensus 9 ~~~~~~G~~v~L~C~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~ 88 (112)
T 2z35_A 9 QVALSEEDFLTIHCNYSASGYPALFWYVQYPGEGPQFLFRASRDKEKGSSRGFEATYNKEATSFHLQKASVQESDSAVYY 88 (112)
T ss_dssp EEEEETTCCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSTTCEEEETTEEEECBTTTTBCCEEESSCCSTTCSEEE
T ss_pred cEEEcCCCCEEEEEEECCCCCCeEEEEEECCCCCcEEeEEEecccCCccCCCEEEEEcCCCCEEEEEECCCChhhCEEEE
Confidence 356789999999999987667789999842 1121 124555432 223568999999999999999
Q ss_pred EEEe
Q psy12132 66 CQAS 69 (126)
Q Consensus 66 C~~~ 69 (126)
|.+.
T Consensus 89 C~~~ 92 (112)
T 2z35_A 89 CALS 92 (112)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9987
No 489
>3bj9_1 Immunoglobulin IOTA chain, immunoglobulin lambda- like polypeptide 1; immunoglobulin domain, beta sheet, polymorphism, immune system; 2.00A {Homo sapiens} PDB: 2h3n_A
Probab=98.91 E-value=8e-09 Score=54.55 Aligned_cols=69 Identities=13% Similarity=0.262 Sum_probs=49.3
Q ss_pred eeccCCccEEEEEEeeec---CCCeeEEEECC-----EEec-------------cCCcEEEEecC--CeEEEEEecCCCC
Q psy12132 3 SITAPDMRAEIICNVYAN---PPAKVEWFRDG-----TAIT-------------LGGRIDMHVSS--EKHSLLVRHIKDT 59 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~---p~~~~~w~~~~-----~~~~-------------~~~~~~~~~~~--~~~~l~i~~~~~~ 59 (126)
+.+.+|+++.|.|..... +...+.|++.. ..+. ...++....+. ....|.|.+++..
T Consensus 8 ~~~~~G~~v~L~C~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~~~~ 87 (116)
T 3bj9_1 8 MSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQPE 87 (116)
T ss_dssp EEEETTCCEEEEEEECSSSCGGGCCEEEEEECTTSCCEEEEEEEETTEEEECTTCCTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred EEEcCCCcEEEEEEeecCccCCCceEEEEEeCCCCCcEEEEEEecCCCceeCccCCCcEEEEecCCCceEEEEECCCChh
Confidence 567889999999998743 45679998742 1111 12355554332 2458999999999
Q ss_pred CCEEEEEEEecC
Q psy12132 60 DFGNYMCQASNN 71 (126)
Q Consensus 60 d~g~y~C~~~~~ 71 (126)
|+|.|.|.+.+.
T Consensus 88 DsG~Y~C~~~~~ 99 (116)
T 3bj9_1 88 DEAMYYCAMGAR 99 (116)
T ss_dssp GCEEEEEEECCS
T ss_pred HCEEEEEEEeCC
Confidence 999999998764
No 490
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=98.90 E-value=4e-09 Score=61.00 Aligned_cols=73 Identities=14% Similarity=0.267 Sum_probs=51.4
Q ss_pred CCccEEEEEEeeec--CCCeeEEEECCEEeccCC---cEEEEecCC---eEEEEEecCCCCCCEEEEEEEecCCceeEEE
Q psy12132 7 PDMRAEIICNVYAN--PPAKVEWFRDGTAITLGG---RIDMHVSSE---KHSLLVRHIKDTDFGNYMCQASNNLGSSQQF 78 (126)
Q Consensus 7 ~g~~~~l~C~~~~~--p~~~~~w~~~~~~~~~~~---~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~ 78 (126)
.|+.+.|.|.+.+. |.+.+.|++++..+.... ......++. ...|.|..+...|.|.|+|.+.+..+.....
T Consensus 125 ~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~ 204 (211)
T 3tv3_L 125 QANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKT 204 (211)
T ss_dssp HTTCEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEEE
T ss_pred cCCCeEEEEEeeeecCCCeEEEEEECCeecCCCcccCCceECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEee
Confidence 58999999999875 357899999998775321 001111111 1368888888889999999999987665554
Q ss_pred E
Q psy12132 79 I 79 (126)
Q Consensus 79 ~ 79 (126)
+
T Consensus 205 ~ 205 (211)
T 3tv3_L 205 V 205 (211)
T ss_dssp E
T ss_pred c
Confidence 4
No 491
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=98.90 E-value=2.5e-09 Score=63.54 Aligned_cols=68 Identities=21% Similarity=0.340 Sum_probs=48.0
Q ss_pred CCccEEEEEEeeec-CC-CeeEEEECCEEeccC--CcEEEEec--C---CeEEEEEecCCCCCCEEEEEEEecCCce
Q psy12132 7 PDMRAEIICNVYAN-PP-AKVEWFRDGTAITLG--GRIDMHVS--S---EKHSLLVRHIKDTDFGNYMCQASNNLGS 74 (126)
Q Consensus 7 ~g~~~~l~C~~~~~-p~-~~~~w~~~~~~~~~~--~~~~~~~~--~---~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 74 (126)
.|+.+.|.|.+.+. |. +.+.|++++..+... ........ + ....|.|.++...|.|.|+|.+.|....
T Consensus 168 ~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~ 244 (254)
T 2c1o_A 168 TSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 244 (254)
T ss_dssp HTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCS
T ss_pred cCCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCCC
Confidence 47789999999874 44 469999999876543 11111111 1 1247999999999999999999997644
No 492
>2hp4_A T-cell surface glycoprotein CD8 alpha chain; CO-receptor, soluble protein, KD, protein engineering, immunotherapy, immune-suppressor, immune system; 2.10A {Homo sapiens} PDB: 1akj_D 1cd8_A 3qzw_G 2q3a_A
Probab=98.90 E-value=1.6e-08 Score=53.29 Aligned_cols=70 Identities=19% Similarity=0.354 Sum_probs=50.7
Q ss_pred ceeccCCccEEEEEEeeec-CCCeeEEEEC--CE-----Ee-c--c----------CCcEEEEecCCeEEEEEecCCCCC
Q psy12132 2 HSITAPDMRAEIICNVYAN-PPAKVEWFRD--GT-----AI-T--L----------GGRIDMHVSSEKHSLLVRHIKDTD 60 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~-p~~~~~w~~~--~~-----~~-~--~----------~~~~~~~~~~~~~~l~i~~~~~~d 60 (126)
.+.+.+|++++|.|...+. +...+.|++. +. .+ . . ..++..........|.|.+++..|
T Consensus 9 ~v~v~~G~~vtL~C~~~~~~~~~~v~Wyrq~~g~~~~~~~l~~~~~~~~~~~~~~~~~rf~~~~~~~~~~L~I~~~~~~D 88 (114)
T 2hp4_A 9 DRTWNLGETVELKCQVLLSNPTSGASWLFQPRGAAASPTFLLYLNQNKPKAAEGLDTQRFSGKRLGDTFVLTLSDFRREN 88 (114)
T ss_dssp SCCCCTTCCEEEEEEECCSSCCSCEEEEEEESSSSCCCEEEEEESSSSCEECTTCCTTTEEEEEETTEEEEEESSCCGGG
T ss_pred EEEEcCCCCEEEEEEeecCCCCceEEEEEECCCCCCCcEEEEEEcCCCccccCCCCcccEEEEecCCEEEEEECCCCHHH
Confidence 3567889999999999744 3567999873 22 11 0 0 245655444456789999999999
Q ss_pred CEEEEEEEecC
Q psy12132 61 FGNYMCQASNN 71 (126)
Q Consensus 61 ~g~y~C~~~~~ 71 (126)
+|.|.|.+.+.
T Consensus 89 sg~Y~C~~~~~ 99 (114)
T 2hp4_A 89 EGYYFCSALSN 99 (114)
T ss_dssp CEEEEEEEEET
T ss_pred CEEEEEEEecC
Confidence 99999998764
No 493
>3bik_B Programmed cell death protein 1; CO-stimulation, receptor-ligand complex, immunoglobulin-like sandwich, T cell, B cell, programmed death; 2.65A {Mus musculus} SCOP: b.1.1.1
Probab=98.89 E-value=7.8e-08 Score=52.14 Aligned_cols=69 Identities=14% Similarity=0.262 Sum_probs=50.5
Q ss_pred eeccCCccEEEEEEeeecC-CCeeEEEEC--CE---Eec----------cCCcEEEEe--cCCeEEEEEecCCCCCCEEE
Q psy12132 3 SITAPDMRAEIICNVYANP-PAKVEWFRD--GT---AIT----------LGGRIDMHV--SSEKHSLLVRHIKDTDFGNY 64 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~~p-~~~~~w~~~--~~---~~~----------~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y 64 (126)
+.+.+|++++|.|...... ...+.|++. +. .+. ...++.... ......|.|.+++..|+|.|
T Consensus 19 v~v~~G~~vtL~C~~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~Y 98 (134)
T 3bik_B 19 LTVSEGANATFTCSLSNWSEDLMLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQLPNRHDFHMNILDTRRNDSGIY 98 (134)
T ss_dssp EEEETTSCEEEEEEESSCCTTCEEEEEEECTTCCEEEEEEEETTEEEESSCTTEEEEECTTSSEEEEEECSCCGGGCEEE
T ss_pred EEEeCCCCEEEEEEeCCCCCCcEEEEEEcCCCCCceEEEEEcCCCCCcccCCCEEEEecCCCCEEEEEECCCChHHCEEE
Confidence 5678899999999987543 468999984 21 111 134666543 34467899999999999999
Q ss_pred EEEEecC
Q psy12132 65 MCQASNN 71 (126)
Q Consensus 65 ~C~~~~~ 71 (126)
.|.+.+.
T Consensus 99 ~C~~~~~ 105 (134)
T 3bik_B 99 LCGAISL 105 (134)
T ss_dssp EEEEEEC
T ss_pred EEEEEeC
Confidence 9998764
No 494
>3noi_A Natural cytotoxicity triggering receptor 3; immune system, innate immunity, immunoglobulin-like I2 type natural killer cell activation; HET: 1PG; 1.84A {Homo sapiens} PDB: 3pv6_B*
Probab=98.88 E-value=2.5e-09 Score=56.89 Aligned_cols=69 Identities=23% Similarity=0.441 Sum_probs=49.6
Q ss_pred ceeccCCccEEEEEEeeecC----CCeeEEEECC----EEec-----cCCcEEEEe-----cCCeEEEEEecCCCCCCEE
Q psy12132 2 HSITAPDMRAEIICNVYANP----PAKVEWFRDG----TAIT-----LGGRIDMHV-----SSEKHSLLVRHIKDTDFGN 63 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p----~~~~~w~~~~----~~~~-----~~~~~~~~~-----~~~~~~l~i~~~~~~d~g~ 63 (126)
.+.+.+|+++.|.|.+...+ ...+.|++.. ..+. ...++.... ......|.|.+++..|+|.
T Consensus 16 ~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~g~~~~~~~~~~~~R~~~~~~~~~~~~~~~sL~I~~v~~~DsG~ 95 (120)
T 3noi_A 16 EIRTLEGSSAFLPCSFNASQGRLAIGSVTWFRDEVVPGKEVRNGTPEFRGRLAPLASSRFLHDHQAELHIRDVRGHDASI 95 (120)
T ss_dssp EEEEETTSCEEECCEECCCTTSCCCEEEEEEESSCSTTCBCCTTCTTTTTCEECCCHHHHHTTCBCCEEESSCCGGGCEE
T ss_pred EEEEEcCCCEEEEeeecCCCCCCceeEEEEEeccCCCCceecccccccCCcEEeecccccccCCcEEEEEecCChhhCEE
Confidence 35678899999999997654 4579999864 3222 123444322 2234689999999999999
Q ss_pred EEEEEec
Q psy12132 64 YMCQASN 70 (126)
Q Consensus 64 y~C~~~~ 70 (126)
|.|.+..
T Consensus 96 Y~C~v~~ 102 (120)
T 3noi_A 96 YVCRVEV 102 (120)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999874
No 495
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.88 E-value=2.6e-10 Score=66.06 Aligned_cols=69 Identities=19% Similarity=0.263 Sum_probs=49.4
Q ss_pred cCCccEEEEEEeeec-CC-CeeEEEECCEEeccCCcEE-EEecC----CeEEEEEecCCCCCCEEEEEEEecCCce
Q psy12132 6 APDMRAEIICNVYAN-PP-AKVEWFRDGTAITLGGRID-MHVSS----EKHSLLVRHIKDTDFGNYMCQASNNLGS 74 (126)
Q Consensus 6 ~~g~~~~l~C~~~~~-p~-~~~~w~~~~~~~~~~~~~~-~~~~~----~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 74 (126)
..|+.+.|.|.+.+. |. +.+.|++++..+....... ....+ ....|.|.++...|.|.|+|.+.|..+.
T Consensus 126 ~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (212)
T 1nfd_E 126 LRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKTTKPSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGET 201 (212)
T ss_dssp HHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBCCCCBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTT
T ss_pred ccCCceEEEEEEEeeECCccEEEEEECCeEcCCCeecCCceecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCce
Confidence 358899999999887 44 7999999998875432110 00001 0135889999999999999999997654
No 496
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=98.88 E-value=1.5e-08 Score=57.74 Aligned_cols=64 Identities=13% Similarity=0.308 Sum_probs=47.0
Q ss_pred CccEEEEEEeeecCCCeeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEEEE
Q psy12132 8 DMRAEIICNVYANPPAKVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQLS 82 (126)
Q Consensus 8 g~~~~l~C~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~ 82 (126)
+.++.|.|.+.+.|.+.+.|++++..+. . ... .+.+.. ...|.|.|+|.+.|..+.......+.
T Consensus 115 ~~~v~L~C~~~~~p~~~~~W~~~g~~l~-~------~~~---~i~~~~-~~~d~G~Y~C~a~N~~~~~~s~~~~~ 178 (182)
T 1hnf_A 115 CINTTLTCEVMNGTDPELNLYQDGKHLK-L------SQR---VITHKW-TTSLSAKFKCTAGNKVSKESSVEPVS 178 (182)
T ss_dssp TTTTEEEEECSSCSSCEEEEEESSCEEE-E------ESS---CEEEEC-CSCEEEEEEEEEECSSCEEEEEEEEE
T ss_pred cCcEEEEeEccCCCCCEEEEEECCEECC-C------CCc---EEEEec-ccCCCcEEEEEEEeCCCCcEEcceec
Confidence 3368999999988899999999987761 1 011 233332 46899999999999988777666553
No 497
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=98.88 E-value=1.4e-08 Score=61.43 Aligned_cols=70 Identities=17% Similarity=0.330 Sum_probs=52.3
Q ss_pred eeccCCccEEEEEEeee-cC-CCeeEEEEC--CEEec------------cCCcEEEEecCCeEEEEEecCCCCCCEEEEE
Q psy12132 3 SITAPDMRAEIICNVYA-NP-PAKVEWFRD--GTAIT------------LGGRIDMHVSSEKHSLLVRHIKDTDFGNYMC 66 (126)
Q Consensus 3 ~~~~~g~~~~l~C~~~~-~p-~~~~~w~~~--~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 66 (126)
+.+.+|++++|.|.+.+ .+ .+.+.|++. +..+. ...++..........|.|.+++..|.|.|.|
T Consensus 149 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C 228 (280)
T 3fku_X 149 VSKGLRQTATLTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEADYYC 228 (280)
T ss_dssp EEECTTCCEEEEEECCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCSEEEE
T ss_pred EEEecCCCEEEEEEecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEE
Confidence 45778999999999987 43 478999873 22111 1245665555556789999999999999999
Q ss_pred EEecCC
Q psy12132 67 QASNNL 72 (126)
Q Consensus 67 ~~~~~~ 72 (126)
.+.+..
T Consensus 229 ~~~~~~ 234 (280)
T 3fku_X 229 STWDSS 234 (280)
T ss_dssp EEEETT
T ss_pred EEecCC
Confidence 998765
No 498
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain, integrin, allosteric mobility, cell adhesi immune system; HET: NAG; 2.10A {Homo sapiens}
Probab=98.87 E-value=9.5e-08 Score=55.02 Aligned_cols=114 Identities=7% Similarity=-0.069 Sum_probs=71.7
Q ss_pred ceeccCCccEEEEEEeeecCCC-eeEEEECCEEeccCCcEEEEecCCeEEEEEecCCCCCCEEEEEEEecCCceeEEEEE
Q psy12132 2 HSITAPDMRAEIICNVYANPPA-KVEWFRDGTAITLGGRIDMHVSSEKHSLLVRHIKDTDFGNYMCQASNNLGSSQQFIQ 80 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 80 (126)
+..+..|+++.|.|.+. -+.+ .+.|.-.-... ..........+.+.++. .|.+.|.|.+........+.+.
T Consensus 11 ~~~V~~G~Sv~l~Cs~~-c~~p~~~~~~t~l~~~------~~~~g~~~~~~~ls~vs-~d~~~~~C~~~c~~~~~~~~v~ 82 (196)
T 3bn3_B 11 VAFVERGGSLWLNCSTN-CPRPERGGLETSLRRN------GTQRGLRWLARQLVDIR-EPETQPVCFFRCARRTLQARGL 82 (196)
T ss_dssp EEEEETTEEEEEEEEEC-CSSCSEEEEECSSEEE------EEEEETTEEEEEEEEEC-SSEECCEEEEEETTEEEEEECE
T ss_pred CcEEcCCCeEEEEEeCC-CCCCCccEEEEccCCe------eEccccCceEEEEEEEc-cCCCceEEEEECCCCceEEEEE
Confidence 35678899999999996 4555 67774321110 01111122358888888 7777799997765455566666
Q ss_pred EEecCC--CCeeccCc-ceeCCCeeEEEEEEccCCcceeEEEEEEE
Q psy12132 81 LSGIPN--IPVFQKSS-RRLGPDGYRLVWQVDTYSAIIQYLLKFRE 123 (126)
Q Consensus 81 l~~~~~--~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~r~ 123 (126)
|.+... .+.+...+ ....++.+.|+|.+.+..|...+.+.|.+
T Consensus 83 l~Vy~~P~~v~i~~~~~~~~~G~~~tL~C~v~~~~P~~~L~i~wlk 128 (196)
T 3bn3_B 83 IRTFQRPDRVELMPLPPWQPVGENFTLSCRVPGAGPRASLTLTLLR 128 (196)
T ss_dssp EEEEBCCCCCEECCCCSSEETTSEEEEEEEETTCBCGGGEEEEEEE
T ss_pred EEEecCCCcCEEccCCccccCCCcEEEEEEeCCccCCCCcEEEEEe
Confidence 665432 22232221 25678899999999888777766555554
No 499
>1a2y_B IGG1-kappa D1.3 FV (heavy chain); complex (immunoglobulin/hydrolase), immunoglobulin V region, signal, hydrolase, glycosidase, bacteriolytic enzyme, egg white; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1a7r_H 1dvf_B 1g7h_B 1g7i_B 1g7j_B 1g7l_B 1g7m_B 1kir_B 1vfa_B 1vfb_B 1kiq_B 1a7o_H 1a7n_H 1a7p_H 1kip_B 1a7q_H 1dl7_H* 1bvk_B 1bvl_A 1p4i_H ...
Probab=98.87 E-value=4.3e-08 Score=51.77 Aligned_cols=70 Identities=19% Similarity=0.349 Sum_probs=50.3
Q ss_pred ceeccCCccEEEEEEeeecC--CCeeEEEECC-----EEec---c----------CCcEEEEec--CCeEEEEEecCCCC
Q psy12132 2 HSITAPDMRAEIICNVYANP--PAKVEWFRDG-----TAIT---L----------GGRIDMHVS--SEKHSLLVRHIKDT 59 (126)
Q Consensus 2 ~~~~~~g~~~~l~C~~~~~p--~~~~~w~~~~-----~~~~---~----------~~~~~~~~~--~~~~~l~i~~~~~~ 59 (126)
.+.+.+|++++|.|.+.+.+ ...+.|++.. ..+. . ..++....+ .....|.|.+++..
T Consensus 9 ~~~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~ 88 (116)
T 1a2y_B 9 PGLVAPSQSLSITCTVSGFSLTGYGVNWVRQPPGKGLEWLGMIWGDGNTDYNSALKSRLSISKDNSKSQVFLKMNSLHTD 88 (116)
T ss_dssp CSEECTTSCEEEEEEEESSCTTSSEEEEEEECTTSCCEEEEEECTTSCEEECTTTGGGEEEEEEGGGTEEEEEECSCCGG
T ss_pred CEEEeCCCcEEEEEEEcCCCcCCcEEEEEEeCCCCCcEEEEEEecCCCeeeCcccCCcEEEEEECCCCEEEEEECCCCHH
Confidence 35678899999999997543 3679998742 1111 0 135555432 34578999999999
Q ss_pred CCEEEEEEEecC
Q psy12132 60 DFGNYMCQASNN 71 (126)
Q Consensus 60 d~g~y~C~~~~~ 71 (126)
|+|.|.|.+.+.
T Consensus 89 Dsg~Y~C~~~~~ 100 (116)
T 1a2y_B 89 DTARYYCARERD 100 (116)
T ss_dssp GCEEEEEEEESS
T ss_pred HCEEEEEEEecC
Confidence 999999998764
No 500
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=98.87 E-value=4.5e-08 Score=57.64 Aligned_cols=77 Identities=12% Similarity=0.205 Sum_probs=50.0
Q ss_pred CC-ccEEEEEEeeec-CCC-eeEEEE-CCEEeccCCcE-EEEecC---CeEEEEEecCCC--CCCEEEEEEEecCCceeE
Q psy12132 7 PD-MRAEIICNVYAN-PPA-KVEWFR-DGTAITLGGRI-DMHVSS---EKHSLLVRHIKD--TDFGNYMCQASNNLGSSQ 76 (126)
Q Consensus 7 ~g-~~~~l~C~~~~~-p~~-~~~w~~-~~~~~~~~~~~-~~~~~~---~~~~l~i~~~~~--~d~g~y~C~~~~~~~~~~ 76 (126)
.| +.+.|.|.+.+. |.+ .+.|++ ++..+...... .....+ ....|.|..... .|.|.|+|.+.+..+...
T Consensus 139 ~g~~~v~L~C~~~g~~P~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~~ 218 (232)
T 1dn0_B 139 SDTSSVAVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGNKE 218 (232)
T ss_dssp --CCSEEEEEEEEEEBSSCCEEEEEETTSCEECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCCEE
T ss_pred CCCCcEEEEEEEEEEeCCCeEEEEEcCCCCceeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCCcc
Confidence 57 899999999876 776 999999 88765430000 000111 123688888776 789999999999887765
Q ss_pred EEEEEEe
Q psy12132 77 QFIQLSG 83 (126)
Q Consensus 77 ~~~~l~~ 83 (126)
....+.+
T Consensus 219 ~~~~i~~ 225 (232)
T 1dn0_B 219 KNVPLPV 225 (232)
T ss_dssp EEEECCC
T ss_pred eeEecCC
Confidence 5554443
Done!