Your job contains 1 sequence.
>psy12139
MLLELSPAQLLMLLASDEALRQKVEEAMDIVMNLSGHDLSSENLLGSSDGIDIHSSTVKG
ELTLR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12139
(65 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E7ET84 - symbol:UBR5 "E3 ubiquitin-protein liga... 115 5.3e-06 1
UNIPROTKB|I3LGM1 - symbol:LOC100738301 "Uncharacterized p... 115 1.2e-05 1
RGD|621236 - symbol:Ubr5 "ubiquitin protein ligase E3 com... 118 1.8e-05 1
UNIPROTKB|Q62671 - symbol:Ubr5 "E3 ubiquitin-protein liga... 118 1.8e-05 1
UNIPROTKB|K7GPI8 - symbol:LOC100738301 "Uncharacterized p... 115 2.1e-05 1
ZFIN|ZDB-GENE-030131-6559 - symbol:ubr5 "ubiquitin protei... 117 2.4e-05 1
UNIPROTKB|F1P0U1 - symbol:Gga.55416 "Uncharacterized prot... 116 3.0e-05 1
UNIPROTKB|J9P5M9 - symbol:UBR5 "Uncharacterized protein" ... 115 3.1e-05 1
UNIPROTKB|E7EMW7 - symbol:UBR5 "E3 ubiquitin-protein liga... 115 3.8e-05 1
MGI|MGI:1918040 - symbol:Ubr5 "ubiquitin protein ligase E... 115 3.8e-05 1
UNIPROTKB|F1N0L2 - symbol:UBR5 "Uncharacterized protein" ... 115 3.8e-05 1
UNIPROTKB|F1PBF9 - symbol:UBR5 "Uncharacterized protein" ... 115 3.8e-05 1
UNIPROTKB|J3KMW7 - symbol:UBR5 "E3 ubiquitin-protein liga... 115 3.8e-05 1
UNIPROTKB|O95071 - symbol:UBR5 "E3 ubiquitin-protein liga... 115 3.8e-05 1
>UNIPROTKB|E7ET84 [details] [associations]
symbol:UBR5 "E3 ubiquitin-protein ligase UBR5" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR002004 Pfam:PF00658 PROSITE:PS50237 PROSITE:PS51309
SMART:SM00119 SMART:SM00517 GO:GO:0016567 GO:GO:0003723
GO:GO:0005622 GO:GO:0004842 Gene3D:1.10.1900.10 SUPFAM:SSF63570
SUPFAM:SSF56204 ChiTaRS:UBR5 EMBL:AP002907 HGNC:HGNC:16806
EMBL:AP002981 IPI:IPI00977666 ProteinModelPortal:E7ET84 SMR:E7ET84
Ensembl:ENST00000518205 ArrayExpress:E7ET84 Bgee:E7ET84
Uniprot:E7ET84
Length = 527
Score = 115 (45.5 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 23/45 (51%), Positives = 38/45 (84%)
Query: 1 MLLELSPAQLLMLLASDEALRQKVEEAMDIVMNLSGHDLSSENLL 45
MLLELSPAQLL+LLAS+++LR +V+EAM++++ G + ++++L
Sbjct: 148 MLLELSPAQLLLLLASEDSLRARVDEAMELII-AHGRENGADSIL 191
>UNIPROTKB|I3LGM1 [details] [associations]
symbol:LOC100738301 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR002004 Pfam:PF00658 PROSITE:PS50237 PROSITE:PS51309
SMART:SM00119 SMART:SM00517 GO:GO:0016567 GO:GO:0003723
GO:GO:0005622 GO:GO:0004842 Gene3D:1.10.1900.10 SUPFAM:SSF63570
SUPFAM:SSF56204 GeneTree:ENSGT00640000091448 EMBL:CU207279
Ensembl:ENSSSCT00000023965 OMA:GRPRITH Uniprot:I3LGM1
Length = 1000
Score = 115 (45.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 23/45 (51%), Positives = 38/45 (84%)
Query: 1 MLLELSPAQLLMLLASDEALRQKVEEAMDIVMNLSGHDLSSENLL 45
MLLELSPAQLL+LLAS+++LR +V+EAM++++ G + ++++L
Sbjct: 621 MLLELSPAQLLLLLASEDSLRARVDEAMELII-AHGRENGADSIL 664
>RGD|621236 [details] [associations]
symbol:Ubr5 "ubiquitin protein ligase E3 component n-recognin 5"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IBA;TAS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=ISO;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=TAS] [GO:0033160 "positive regulation of
protein import into nucleus, translocation" evidence=ISO]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=ISO]
[GO:0035413 "positive regulation of catenin import into nucleus"
evidence=ISO] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0050847
"progesterone receptor signaling pathway" evidence=ISO;IBA]
[GO:0090263 "positive regulation of canonical Wnt receptor
signaling pathway" evidence=ISO] [GO:1901315 "negative regulation
of histone H2A K63-linked ubiquitination" evidence=ISO;ISS]
[GO:2000780 "negative regulation of double-strand break repair"
evidence=ISO;ISS] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR002004 InterPro:IPR003126 InterPro:IPR024725
Pfam:PF00658 Pfam:PF02207 Pfam:PF11547 PROSITE:PS50237
PROSITE:PS51157 PROSITE:PS51309 SMART:SM00119 SMART:SM00517
UniPathway:UPA00143 RGD:621236 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0006974
GO:GO:0003723 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 GO:GO:0090263 GO:GO:0000209 GO:GO:0042787
GO:GO:0035413 GO:GO:0034450 GO:GO:0033160 Gene3D:1.10.1900.10
SUPFAM:SSF63570 SUPFAM:SSF56204 eggNOG:COG5021 InterPro:IPR013993
SMART:SM00396 GO:GO:0050847 GO:GO:2000780 GO:GO:1901315 PDB:3NTW
PDBsum:3NTW HOGENOM:HOG000046848 OrthoDB:EOG4QVCB2 EMBL:X64411
IPI:IPI00768617 PIR:S22659 UniGene:Rn.54812 STRING:Q62671
PhosphoSite:Q62671 PRIDE:Q62671 UCSC:RGD:621236 InParanoid:Q62671
ArrayExpress:Q62671 Genevestigator:Q62671
GermOnline:ENSRNOG00000006816 Uniprot:Q62671
Length = 2788
Score = 118 (46.6 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 24/45 (53%), Positives = 38/45 (84%)
Query: 1 MLLELSPAQLLMLLASDEALRQKVEEAMDIVMNLSGHDLSSENLL 45
MLLELSPAQLL+LLAS+++LR +VEEAM++++ G + ++++L
Sbjct: 2409 MLLELSPAQLLLLLASEDSLRARVEEAMELIV-AHGRENGADSIL 2452
>UNIPROTKB|Q62671 [details] [associations]
symbol:Ubr5 "E3 ubiquitin-protein ligase UBR5"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR002004 InterPro:IPR003126
InterPro:IPR024725 Pfam:PF00658 Pfam:PF02207 Pfam:PF11547
PROSITE:PS50237 PROSITE:PS51157 PROSITE:PS51309 SMART:SM00119
SMART:SM00517 UniPathway:UPA00143 RGD:621236 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0006974 GO:GO:0003723 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 GO:GO:0090263 GO:GO:0000209
GO:GO:0042787 GO:GO:0035413 GO:GO:0034450 GO:GO:0033160
Gene3D:1.10.1900.10 SUPFAM:SSF63570 SUPFAM:SSF56204 eggNOG:COG5021
InterPro:IPR013993 SMART:SM00396 GO:GO:0050847 GO:GO:2000780
GO:GO:1901315 PDB:3NTW PDBsum:3NTW HOGENOM:HOG000046848
OrthoDB:EOG4QVCB2 EMBL:X64411 IPI:IPI00768617 PIR:S22659
UniGene:Rn.54812 STRING:Q62671 PhosphoSite:Q62671 PRIDE:Q62671
UCSC:RGD:621236 InParanoid:Q62671 ArrayExpress:Q62671
Genevestigator:Q62671 GermOnline:ENSRNOG00000006816 Uniprot:Q62671
Length = 2788
Score = 118 (46.6 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 24/45 (53%), Positives = 38/45 (84%)
Query: 1 MLLELSPAQLLMLLASDEALRQKVEEAMDIVMNLSGHDLSSENLL 45
MLLELSPAQLL+LLAS+++LR +VEEAM++++ G + ++++L
Sbjct: 2409 MLLELSPAQLLLLLASEDSLRARVEEAMELIV-AHGRENGADSIL 2452
>UNIPROTKB|K7GPI8 [details] [associations]
symbol:LOC100738301 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR002004 Pfam:PF00658 PROSITE:PS50237 PROSITE:PS51309
SMART:SM00119 SMART:SM00517 Gene3D:1.10.1900.10 SUPFAM:SSF63570
SUPFAM:SSF56204 GeneTree:ENSGT00640000091448 EMBL:CU207279
Ensembl:ENSSSCT00000035758 Uniprot:K7GPI8
Length = 1585
Score = 115 (45.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 23/45 (51%), Positives = 38/45 (84%)
Query: 1 MLLELSPAQLLMLLASDEALRQKVEEAMDIVMNLSGHDLSSENLL 45
MLLELSPAQLL+LLAS+++LR +V+EAM++++ G + ++++L
Sbjct: 1206 MLLELSPAQLLLLLASEDSLRARVDEAMELII-AHGRENGADSIL 1249
>ZFIN|ZDB-GENE-030131-6559 [details] [associations]
symbol:ubr5 "ubiquitin protein ligase E3 component
n-recognin 5" species:7955 "Danio rerio" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IBA] [GO:0006464
"cellular protein modification process" evidence=IEA] [GO:0043130
"ubiquitin binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0050847 "progesterone receptor
signaling pathway" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR002004 InterPro:IPR003126 InterPro:IPR024725
Pfam:PF00658 Pfam:PF02207 Pfam:PF11547 PROSITE:PS50237
PROSITE:PS51157 PROSITE:PS51309 SMART:SM00119 SMART:SM00517
ZFIN:ZDB-GENE-030131-6559 GO:GO:0005634 GO:GO:0005737 GO:GO:0008270
GO:GO:0003723 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 GO:GO:0042787 Gene3D:1.10.1900.10 SUPFAM:SSF63570
SUPFAM:SSF56204 GeneTree:ENSGT00640000091448 InterPro:IPR013993
SMART:SM00396 GO:GO:0050847 EMBL:CR293507 IPI:IPI00618527
Ensembl:ENSDART00000134444 ArrayExpress:F1QT71 Bgee:F1QT71
Uniprot:F1QT71
Length = 2822
Score = 117 (46.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 24/45 (53%), Positives = 38/45 (84%)
Query: 1 MLLELSPAQLLMLLASDEALRQKVEEAMDIVMNLSGHDLSSENLL 45
MLLELSPAQLL+LLAS+++LR +VEEAM++++ G + ++++L
Sbjct: 2442 MLLELSPAQLLLLLASEDSLRARVEEAMELLIT-HGRENGADSIL 2485
>UNIPROTKB|F1P0U1 [details] [associations]
symbol:Gga.55416 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 InterPro:IPR002004
InterPro:IPR003126 InterPro:IPR024725 Pfam:PF00658 Pfam:PF02207
Pfam:PF11547 PROSITE:PS50237 PROSITE:PS51157 PROSITE:PS51309
SMART:SM00119 SMART:SM00517 GO:GO:0008270 GO:GO:0016567
GO:GO:0003723 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 Gene3D:1.10.1900.10 SUPFAM:SSF63570
SUPFAM:SSF56204 GeneTree:ENSGT00640000091448 OMA:ERCDGNR
InterPro:IPR013993 SMART:SM00396 EMBL:AADN02023127
EMBL:AADN02023128 EMBL:AADN02023129 EMBL:AADN02023130
EMBL:AADN02023131 EMBL:AADN02023132 EMBL:AADN02023133
EMBL:AADN02023134 EMBL:AADN02023135 EMBL:AADN02023136
EMBL:AADN02023137 EMBL:AADN02023138 EMBL:AADN02023139
IPI:IPI00575408 Ensembl:ENSGALT00000025850 Uniprot:F1P0U1
Length = 2775
Score = 116 (45.9 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 28/55 (50%), Positives = 41/55 (74%)
Query: 1 MLLELSPAQLLMLLASDEALRQKVEEAMDIVM---NLSGHD-LSSENLLGSSDGI 51
MLLELSPAQLL+LLAS+++LR +V+EAM++++ +G D + LL SSD +
Sbjct: 2396 MLLELSPAQLLLLLASEDSLRARVDEAMELIIAHGRENGADSILDLGLLDSSDKV 2450
>UNIPROTKB|J9P5M9 [details] [associations]
symbol:UBR5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR002004 InterPro:IPR003126 Pfam:PF00658 Pfam:PF02207
PROSITE:PS50237 PROSITE:PS51157 PROSITE:PS51309 SMART:SM00119
SMART:SM00517 GO:GO:0008270 GO:GO:0016567 GO:GO:0003723
GO:GO:0005622 GO:GO:0004842 Gene3D:1.10.1900.10 SUPFAM:SSF63570
SUPFAM:SSF56204 GeneTree:ENSGT00640000091448 InterPro:IPR013993
SMART:SM00396 EMBL:AAEX03008693 EMBL:AAEX03008694
Ensembl:ENSCAFT00000047363 Uniprot:J9P5M9
Length = 2307
Score = 115 (45.5 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 23/45 (51%), Positives = 38/45 (84%)
Query: 1 MLLELSPAQLLMLLASDEALRQKVEEAMDIVMNLSGHDLSSENLL 45
MLLELSPAQLL+LLAS+++LR +V+EAM++++ G + ++++L
Sbjct: 1928 MLLELSPAQLLLLLASEDSLRARVDEAMELII-AHGRENGADSIL 1971
>UNIPROTKB|E7EMW7 [details] [associations]
symbol:UBR5 "E3 ubiquitin-protein ligase UBR5" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 InterPro:IPR002004
InterPro:IPR003126 InterPro:IPR024725 Pfam:PF00658 Pfam:PF02207
Pfam:PF11547 PROSITE:PS50237 PROSITE:PS51157 PROSITE:PS51309
SMART:SM00119 SMART:SM00517 GO:GO:0008270 GO:GO:0016567
GO:GO:0003723 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 Gene3D:1.10.1900.10 SUPFAM:SSF63570
SUPFAM:SSF56204 ChiTaRS:UBR5 InterPro:IPR013993 SMART:SM00396
EMBL:AP002907 HGNC:HGNC:16806 EMBL:AP002981 IPI:IPI00983716
ProteinModelPortal:E7EMW7 SMR:E7EMW7 Ensembl:ENST00000521922
ArrayExpress:E7EMW7 Bgee:E7EMW7 Uniprot:E7EMW7
Length = 2792
Score = 115 (45.5 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 23/45 (51%), Positives = 38/45 (84%)
Query: 1 MLLELSPAQLLMLLASDEALRQKVEEAMDIVMNLSGHDLSSENLL 45
MLLELSPAQLL+LLAS+++LR +V+EAM++++ G + ++++L
Sbjct: 2413 MLLELSPAQLLLLLASEDSLRARVDEAMELII-AHGRENGADSIL 2456
>MGI|MGI:1918040 [details] [associations]
symbol:Ubr5 "ubiquitin protein ligase E3 component
n-recognin 5" species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006464 "cellular
protein modification process" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0033160 "positive regulation of protein import into nucleus,
translocation" evidence=ISO] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=ISO] [GO:0035413 "positive regulation of
catenin import into nucleus" evidence=ISO] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050847 "progesterone receptor signaling pathway"
evidence=ISO;IBA] [GO:0090263 "positive regulation of canonical Wnt
receptor signaling pathway" evidence=ISO] [GO:1901315 "negative
regulation of histone H2A K63-linked ubiquitination" evidence=ISO]
[GO:2000780 "negative regulation of double-strand break repair"
evidence=ISO] Pfam:PF00632 InterPro:IPR000569 InterPro:IPR002004
InterPro:IPR003126 InterPro:IPR024725 Pfam:PF00658 Pfam:PF02207
Pfam:PF11547 PROSITE:PS50237 PROSITE:PS51157 PROSITE:PS51309
SMART:SM00119 SMART:SM00517 UniPathway:UPA00143 MGI:MGI:1918040
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0006974 GO:GO:0003723 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 GO:GO:0042787
Gene3D:1.10.1900.10 SUPFAM:SSF63570 SUPFAM:SSF56204 eggNOG:COG5021
KO:K10593 ChiTaRS:UBR5 InterPro:IPR013993 SMART:SM00396
GO:GO:0050847 GO:GO:2000780 GO:GO:1901315 CTD:51366
HOVERGEN:HBG096012 OrthoDB:EOG4QVCB2 EMBL:AY550908 EMBL:AK122398
EMBL:BC049162 EMBL:BC049224 EMBL:BC057458 EMBL:BC057923
EMBL:AK014485 IPI:IPI00831567 RefSeq:NP_001074828.2
RefSeq:NP_001106192.1 UniGene:Mm.476840 ProteinModelPortal:Q80TP3
SMR:Q80TP3 DIP:DIP-56890N IntAct:Q80TP3 STRING:Q80TP3
PhosphoSite:Q80TP3 PaxDb:Q80TP3 PRIDE:Q80TP3 GeneID:70790
KEGG:mmu:70790 UCSC:uc007vno.1 NextBio:332258 Genevestigator:Q80TP3
GermOnline:ENSMUSG00000037487 Uniprot:Q80TP3
Length = 2792
Score = 115 (45.5 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 23/45 (51%), Positives = 38/45 (84%)
Query: 1 MLLELSPAQLLMLLASDEALRQKVEEAMDIVMNLSGHDLSSENLL 45
MLLELSPAQLL+LLAS+++LR +V+EAM++++ G + ++++L
Sbjct: 2413 MLLELSPAQLLLLLASEDSLRARVDEAMELII-AHGRENGADSIL 2456
>UNIPROTKB|F1N0L2 [details] [associations]
symbol:UBR5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000780 "negative regulation of double-strand break
repair" evidence=IEA] [GO:1901315 "negative regulation of histone
H2A K63-linked ubiquitination" evidence=IEA] [GO:0090263 "positive
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0050847 "progesterone receptor signaling pathway"
evidence=IEA] [GO:0035413 "positive regulation of catenin import
into nucleus" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IEA] [GO:0033160 "positive regulation of protein
import into nucleus, translocation" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR002004 InterPro:IPR003126 InterPro:IPR024725
Pfam:PF00658 Pfam:PF02207 Pfam:PF11547 PROSITE:PS50237
PROSITE:PS51157 PROSITE:PS51309 SMART:SM00119 SMART:SM00517
GO:GO:0005634 GO:GO:0008270 GO:GO:0006974 GO:GO:0003723
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0090263
GO:GO:0000209 GO:GO:0035413 GO:GO:0034450 GO:GO:0033160
Gene3D:1.10.1900.10 SUPFAM:SSF63570 SUPFAM:SSF56204
GeneTree:ENSGT00640000091448 KO:K10593 OMA:ERCDGNR
InterPro:IPR013993 SMART:SM00396 GO:GO:0050847 CTD:51366
EMBL:DAAA02039335 IPI:IPI00711165 RefSeq:NP_001179346.1
UniGene:Bt.30209 PRIDE:F1N0L2 Ensembl:ENSBTAT00000028262
GeneID:515582 KEGG:bta:515582 NextBio:20871904 Uniprot:F1N0L2
Length = 2798
Score = 115 (45.5 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 23/45 (51%), Positives = 38/45 (84%)
Query: 1 MLLELSPAQLLMLLASDEALRQKVEEAMDIVMNLSGHDLSSENLL 45
MLLELSPAQLL+LLAS+++LR +V+EAM++++ G + ++++L
Sbjct: 2419 MLLELSPAQLLLLLASEDSLRARVDEAMELII-AHGRENGADSIL 2462
>UNIPROTKB|F1PBF9 [details] [associations]
symbol:UBR5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 InterPro:IPR002004
InterPro:IPR003126 InterPro:IPR024725 Pfam:PF00658 Pfam:PF02207
Pfam:PF11547 PROSITE:PS50237 PROSITE:PS51157 PROSITE:PS51309
SMART:SM00119 SMART:SM00517 GO:GO:0008270 GO:GO:0016567
GO:GO:0003723 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 Gene3D:1.10.1900.10 SUPFAM:SSF63570
SUPFAM:SSF56204 GeneTree:ENSGT00640000091448 KO:K10593 OMA:ERCDGNR
InterPro:IPR013993 SMART:SM00396 CTD:51366 EMBL:AAEX03008693
EMBL:AAEX03008694 RefSeq:XP_532290.2 Ensembl:ENSCAFT00000000972
GeneID:475055 KEGG:cfa:475055 Uniprot:F1PBF9
Length = 2798
Score = 115 (45.5 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 23/45 (51%), Positives = 38/45 (84%)
Query: 1 MLLELSPAQLLMLLASDEALRQKVEEAMDIVMNLSGHDLSSENLL 45
MLLELSPAQLL+LLAS+++LR +V+EAM++++ G + ++++L
Sbjct: 2419 MLLELSPAQLLLLLASEDSLRARVDEAMELII-AHGRENGADSIL 2462
>UNIPROTKB|J3KMW7 [details] [associations]
symbol:UBR5 "E3 ubiquitin-protein ligase UBR5" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 InterPro:IPR002004
InterPro:IPR003126 InterPro:IPR024725 Pfam:PF00658 Pfam:PF02207
Pfam:PF11547 PROSITE:PS50237 PROSITE:PS51157 PROSITE:PS51309
SMART:SM00119 SMART:SM00517 GO:GO:0008270 GO:GO:0016567
GO:GO:0003723 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 Gene3D:1.10.1900.10 SUPFAM:SSF63570
SUPFAM:SSF56204 ChiTaRS:UBR5 InterPro:IPR013993 SMART:SM00396
EMBL:AP002907 HGNC:HGNC:16806 EMBL:AP002981
ProteinModelPortal:J3KMW7 Ensembl:ENST00000220959 Uniprot:J3KMW7
Length = 2798
Score = 115 (45.5 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 23/45 (51%), Positives = 38/45 (84%)
Query: 1 MLLELSPAQLLMLLASDEALRQKVEEAMDIVMNLSGHDLSSENLL 45
MLLELSPAQLL+LLAS+++LR +V+EAM++++ G + ++++L
Sbjct: 2419 MLLELSPAQLLLLLASEDSLRARVDEAMELII-AHGRENGADSIL 2462
>UNIPROTKB|O95071 [details] [associations]
symbol:UBR5 "E3 ubiquitin-protein ligase UBR5" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:1901315 "negative regulation of histone H2A
K63-linked ubiquitination" evidence=IMP] [GO:0006974 "response to
DNA damage stimulus" evidence=IDA;IMP] [GO:2000780 "negative
regulation of double-strand break repair" evidence=IMP] [GO:0004842
"ubiquitin-protein ligase activity" evidence=TAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0008283 "cell proliferation" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0050847 "progesterone receptor
signaling pathway" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0035413 "positive regulation of catenin import
into nucleus" evidence=IMP] [GO:0033160 "positive regulation of
protein import into nucleus, translocation" evidence=IMP]
[GO:0090263 "positive regulation of canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IDA] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR002004 InterPro:IPR003126 InterPro:IPR024725
Pfam:PF00658 Pfam:PF02207 Pfam:PF11547 PROSITE:PS50237
PROSITE:PS51157 PROSITE:PS51309 SMART:SM00119 SMART:SM00517
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0008283 GO:GO:0008270 GO:GO:0006281 GO:GO:0006974
GO:GO:0003723 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0090263 GO:GO:0000209 GO:GO:0042787 GO:GO:0035413
GO:GO:0034450 GO:GO:0033160 Gene3D:1.10.1900.10 SUPFAM:SSF63570
SUPFAM:SSF56204 eggNOG:COG5021 KO:K10593 OMA:ERCDGNR ChiTaRS:UBR5
InterPro:IPR013993 SMART:SM00396 GO:GO:0050847 GO:GO:2000780
GO:GO:1901315 PDB:2QHO PDBsum:2QHO EMBL:AF006010 EMBL:U95000
EMBL:AB020703 EMBL:BC137234 IPI:IPI00026320 RefSeq:NP_056986.2
UniGene:Hs.492445 PDB:1I2T PDB:3PT3 PDBsum:1I2T PDBsum:3PT3
ProteinModelPortal:O95071 SMR:O95071 DIP:DIP-32930N IntAct:O95071
MINT:MINT-196086 STRING:O95071 PhosphoSite:O95071 PaxDb:O95071
PRIDE:O95071 Ensembl:ENST00000520539 GeneID:51366 KEGG:hsa:51366
UCSC:uc003ykr.2 CTD:51366 GeneCards:GC08M103265 H-InvDB:HIX0025542
HGNC:HGNC:16806 HPA:HPA024728 MIM:608413 neXtProt:NX_O95071
PharmGKB:PA162408175 HOGENOM:HOG000046848 HOVERGEN:HBG096012
InParanoid:O95071 OrthoDB:EOG4QVCB2 EvolutionaryTrace:O95071
GenomeRNAi:51366 NextBio:54837 ArrayExpress:O95071 Bgee:O95071
CleanEx:HS_UBR5 Genevestigator:O95071 GermOnline:ENSG00000104517
Uniprot:O95071
Length = 2799
Score = 115 (45.5 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 23/45 (51%), Positives = 38/45 (84%)
Query: 1 MLLELSPAQLLMLLASDEALRQKVEEAMDIVMNLSGHDLSSENLL 45
MLLELSPAQLL+LLAS+++LR +V+EAM++++ G + ++++L
Sbjct: 2419 MLLELSPAQLLLLLASEDSLRARVDEAMELII-AHGRENGADSIL 2462
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.130 0.330 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 65 65 0.00091 102 3 10 23 0.44 28
29 0.46 28
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 427 (46 KB)
Total size of DFA: 81 KB (2066 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 11.76u 0.09s 11.85t Elapsed: 00:00:04
Total cpu time: 11.77u 0.09s 11.86t Elapsed: 00:00:04
Start: Thu Aug 15 11:04:35 2013 End: Thu Aug 15 11:04:39 2013