BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12140
(173 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O95071|UBR5_HUMAN E3 ubiquitin-protein ligase UBR5 OS=Homo sapiens GN=UBR5 PE=1 SV=2
Length = 2799
Score = 112 bits (280), Expect = 1e-24, Method: Composition-based stats.
Identities = 49/77 (63%), Positives = 64/77 (83%)
Query: 16 AIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKR 75
A+R G+ DV+P + LE+LT EDFRLL+NG G++NV +LIS+TSF DESGE +E+L++FKR
Sbjct: 2653 AMRKGLLDVLPKNSLEDLTAEDFRLLVNGCGEVNVQMLISFTSFNDESGENAEKLLQFKR 2712
Query: 76 WLWSIVEKMTHLERMDL 92
W WSIVEKM+ ER DL
Sbjct: 2713 WFWSIVEKMSMTERQDL 2729
Score = 112 bits (280), Expect = 1e-24, Method: Composition-based stats.
Identities = 49/77 (63%), Positives = 64/77 (83%)
Query: 97 AIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKR 156
A+R G+ DV+P + LE+LT EDFRLL+NG G++NV +LIS+TSF DESGE +E+L++FKR
Sbjct: 2653 AMRKGLLDVLPKNSLEDLTAEDFRLLVNGCGEVNVQMLISFTSFNDESGENAEKLLQFKR 2712
Query: 157 WLWSIVEKMTHLERMDL 173
W WSIVEKM+ ER DL
Sbjct: 2713 WFWSIVEKMSMTERQDL 2729
>sp|Q80TP3|UBR5_MOUSE E3 ubiquitin-protein ligase UBR5 OS=Mus musculus GN=Ubr5 PE=1 SV=2
Length = 2792
Score = 112 bits (280), Expect = 1e-24, Method: Composition-based stats.
Identities = 49/77 (63%), Positives = 64/77 (83%)
Query: 16 AIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKR 75
A+R G+ DV+P + LE+LT EDFRLL+NG G++NV +LIS+TSF DESGE +E+L++FKR
Sbjct: 2646 AMRKGLLDVLPKNSLEDLTAEDFRLLVNGCGEVNVQMLISFTSFNDESGENAEKLLQFKR 2705
Query: 76 WLWSIVEKMTHLERMDL 92
W WSIVEKM+ ER DL
Sbjct: 2706 WFWSIVEKMSMTERQDL 2722
Score = 112 bits (280), Expect = 1e-24, Method: Composition-based stats.
Identities = 49/77 (63%), Positives = 64/77 (83%)
Query: 97 AIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKR 156
A+R G+ DV+P + LE+LT EDFRLL+NG G++NV +LIS+TSF DESGE +E+L++FKR
Sbjct: 2646 AMRKGLLDVLPKNSLEDLTAEDFRLLVNGCGEVNVQMLISFTSFNDESGENAEKLLQFKR 2705
Query: 157 WLWSIVEKMTHLERMDL 173
W WSIVEKM+ ER DL
Sbjct: 2706 WFWSIVEKMSMTERQDL 2722
>sp|Q62671|UBR5_RAT E3 ubiquitin-protein ligase UBR5 OS=Rattus norvegicus GN=Ubr5 PE=1
SV=3
Length = 2788
Score = 111 bits (277), Expect = 2e-24, Method: Composition-based stats.
Identities = 48/77 (62%), Positives = 64/77 (83%)
Query: 16 AIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKR 75
A+R G+ DV+P + LE+LT EDFRLL+NG G++NV +LIS+TSF DESGE +E+L++FKR
Sbjct: 2642 AMRKGLLDVLPKNSLEDLTAEDFRLLVNGCGEVNVQMLISFTSFNDESGENAEKLLQFKR 2701
Query: 76 WLWSIVEKMTHLERMDL 92
W WSIVE+M+ ER DL
Sbjct: 2702 WFWSIVERMSMTERQDL 2718
Score = 111 bits (277), Expect = 2e-24, Method: Composition-based stats.
Identities = 48/77 (62%), Positives = 64/77 (83%)
Query: 97 AIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKR 156
A+R G+ DV+P + LE+LT EDFRLL+NG G++NV +LIS+TSF DESGE +E+L++FKR
Sbjct: 2642 AMRKGLLDVLPKNSLEDLTAEDFRLLVNGCGEVNVQMLISFTSFNDESGENAEKLLQFKR 2701
Query: 157 WLWSIVEKMTHLERMDL 173
W WSIVE+M+ ER DL
Sbjct: 2702 WFWSIVERMSMTERQDL 2718
>sp|P51592|HYD_DROME E3 ubiquitin-protein ligase hyd OS=Drosophila melanogaster GN=hyd
PE=1 SV=3
Length = 2885
Score = 109 bits (272), Expect = 1e-23, Method: Composition-based stats.
Identities = 49/77 (63%), Positives = 62/77 (80%)
Query: 16 AIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKR 75
A++ G+FDV+P + + NLT ED RLLLNGVGDINV+ LISYT+F DES E ++L+KFK+
Sbjct: 2739 ALKDGVFDVLPDNSMINLTAEDLRLLLNGVGDINVSTLISYTTFNDESSEGPDKLLKFKK 2798
Query: 76 WLWSIVEKMTHLERMDL 92
W WSIVEKM +ER DL
Sbjct: 2799 WFWSIVEKMNIMERQDL 2815
Score = 109 bits (272), Expect = 1e-23, Method: Composition-based stats.
Identities = 49/77 (63%), Positives = 62/77 (80%)
Query: 97 AIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKR 156
A++ G+FDV+P + + NLT ED RLLLNGVGDINV+ LISYT+F DES E ++L+KFK+
Sbjct: 2739 ALKDGVFDVLPDNSMINLTAEDLRLLLNGVGDINVSTLISYTTFNDESSEGPDKLLKFKK 2798
Query: 157 WLWSIVEKMTHLERMDL 173
W WSIVEKM +ER DL
Sbjct: 2799 WFWSIVEKMNIMERQDL 2815
>sp|D3ZBM7|HACE1_RAT E3 ubiquitin-protein ligase HACE1 OS=Rattus norvegicus GN=Hace1
PE=2 SV=1
Length = 909
Score = 40.8 bits (94), Expect = 0.004, Method: Composition-based stats.
Identities = 39/133 (29%), Positives = 57/133 (42%), Gaps = 13/133 (9%)
Query: 16 AIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKR 75
A G +P S ++ + LLL+G+ +I+V I T + SG ER +
Sbjct: 759 AFLQGFHMFIPPSLIQLFDEYELELLLSGMPEIDVNDWIKNTEYT--SG--YEREDPVIQ 814
Query: 76 WLWSIVEKMTHLERMDL-----GCAIAIRAGIFDVVPASCLENLT----PEDFRLLLNGV 126
W W +VE MT ER+ L G + G +++ S L+N T P LL
Sbjct: 815 WFWEVVEDMTQEERVLLLQFVTGSSRVPHGGFANIMGGSGLQNFTIAAVPYTPNLLPTSS 874
Query: 127 GDINVTVLISYTS 139
IN+ L Y S
Sbjct: 875 TCINMLKLPEYPS 887
Score = 36.6 bits (83), Expect = 0.074, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 97 AIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKR 156
A G +P S ++ + LLL+G+ +I+V I T + SG ER +
Sbjct: 759 AFLQGFHMFIPPSLIQLFDEYELELLLSGMPEIDVNDWIKNTEYT--SG--YEREDPVIQ 814
Query: 157 WLWSIVEKMTHLERMDL 173
W W +VE MT ER+ L
Sbjct: 815 WFWEVVEDMTQEERVLL 831
>sp|Q8CHG5|K0317_MOUSE Protein KIAA0317 OS=Mus musculus GN=Kiaa0317 PE=2 SV=2
Length = 823
Score = 40.0 bits (92), Expect = 0.008, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 20 GIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKRWLWS 79
G+ ++VP + L + LL+ G GDINV+ ++ + S E+++ RW W+
Sbjct: 682 GLNELVPENLLAIFDENELELLMCGTGDINVSDFKAHAVVVGGSWHFREKVM---RWFWA 738
Query: 80 IVEKMTHLE 88
+V +T E
Sbjct: 739 VVSSLTQEE 747
Score = 40.0 bits (92), Expect = 0.008, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 101 GIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKRWLWS 160
G+ ++VP + L + LL+ G GDINV+ ++ + S E+++ RW W+
Sbjct: 682 GLNELVPENLLAIFDENELELLMCGTGDINVSDFKAHAVVVGGSWHFREKVM---RWFWA 738
Query: 161 IVEKMTHLE 169
+V +T E
Sbjct: 739 VVSSLTQEE 747
>sp|Q8IYU2|HACE1_HUMAN E3 ubiquitin-protein ligase HACE1 OS=Homo sapiens GN=HACE1 PE=1
SV=2
Length = 909
Score = 39.7 bits (91), Expect = 0.009, Method: Composition-based stats.
Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 13/133 (9%)
Query: 16 AIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKR 75
A G +P S ++ + LLL+G+ +I+V+ I T + SG ER +
Sbjct: 759 AFLQGFHMFIPPSLIQLFDEYELELLLSGMPEIDVSDWIKNTEYT--SG--YEREDPVIQ 814
Query: 76 WLWSIVEKMTHLERMDL-----GCAIAIRAGIFDVVPASCLENLT----PEDFRLLLNGV 126
W W +VE +T ER+ L G + G +++ S L+N T P LL
Sbjct: 815 WFWEVVEDITQEERVLLLQFVTGSSRVPHGGFANIMGGSGLQNFTIAAVPYTPNLLPTSS 874
Query: 127 GDINVTVLISYTS 139
IN+ L Y S
Sbjct: 875 TCINMLKLPEYPS 887
Score = 35.4 bits (80), Expect = 0.17, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 97 AIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKR 156
A G +P S ++ + LLL+G+ +I+V+ I T + SG ER +
Sbjct: 759 AFLQGFHMFIPPSLIQLFDEYELELLLSGMPEIDVSDWIKNTEYT--SG--YEREDPVIQ 814
Query: 157 WLWSIVEKMTHLERMDL 173
W W +VE +T ER+ L
Sbjct: 815 WFWEVVEDITQEERVLL 831
>sp|E1C656|HACE1_CHICK E3 ubiquitin-protein ligase HACE1 OS=Gallus gallus GN=HACE1 PE=2
SV=1
Length = 942
Score = 39.3 bits (90), Expect = 0.013, Method: Composition-based stats.
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 13/133 (9%)
Query: 16 AIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKR 75
A G +P S ++ + LLL+G+ +I+V + T + SG ER + +
Sbjct: 792 AFLQGFHMFIPPSLIQLFDEYELELLLSGMPEIDVNDWLKNTEYT--SG--YERGDQVIQ 847
Query: 76 WLWSIVEKMTHLERMDL-----GCAIAIRAGIFDVVPASCLENLT----PEDFRLLLNGV 126
W W +VE++T ER+ L G + G ++ S L+N T P LL
Sbjct: 848 WFWDVVEELTQEERVLLLQFVTGSSRVPHGGFAHIMGGSGLQNFTIAAVPYTANLLPTSS 907
Query: 127 GDINVTVLISYTS 139
IN+ L Y S
Sbjct: 908 TCINMLKLPEYPS 920
Score = 35.4 bits (80), Expect = 0.18, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 97 AIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKR 156
A G +P S ++ + LLL+G+ +I+V + T + SG ER + +
Sbjct: 792 AFLQGFHMFIPPSLIQLFDEYELELLLSGMPEIDVNDWLKNTEYT--SG--YERGDQVIQ 847
Query: 157 WLWSIVEKMTHLERMDL 173
W W +VE++T ER+ L
Sbjct: 848 WFWDVVEELTQEERVLL 864
>sp|Q3U0D9|HACE1_MOUSE E3 ubiquitin-protein ligase HACE1 OS=Mus musculus GN=Hace1 PE=1
SV=1
Length = 909
Score = 39.3 bits (90), Expect = 0.014, Method: Composition-based stats.
Identities = 38/133 (28%), Positives = 57/133 (42%), Gaps = 13/133 (9%)
Query: 16 AIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKR 75
A G +P S ++ + LLL+G+ +I+V I T + SG ER +
Sbjct: 759 AFLQGFHMFIPPSLIQLFDEYELELLLSGMPEIDVNDWIKNTEYT--SG--YEREDPVIQ 814
Query: 76 WLWSIVEKMTHLERMDL-----GCAIAIRAGIFDVVPASCLENLT----PEDFRLLLNGV 126
W W +VE +T ER+ L G + G +++ S L+N T P LL
Sbjct: 815 WFWEVVEDITQEERVLLLQFVTGSSRVPHGGFANIMGGSGLQNFTIAAVPYTPNLLPTSS 874
Query: 127 GDINVTVLISYTS 139
IN+ L Y S
Sbjct: 875 TCINMLKLPEYPS 887
Score = 35.0 bits (79), Expect = 0.26, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 97 AIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKR 156
A G +P S ++ + LLL+G+ +I+V I T + SG ER +
Sbjct: 759 AFLQGFHMFIPPSLIQLFDEYELELLLSGMPEIDVNDWIKNTEYT--SG--YEREDPVIQ 814
Query: 157 WLWSIVEKMTHLERMDL 173
W W +VE +T ER+ L
Sbjct: 815 WFWEVVEDITQEERVLL 831
>sp|F1N6G5|HACE1_BOVIN E3 ubiquitin-protein ligase HACE1 OS=Bos taurus GN=HACE1 PE=3 SV=3
Length = 909
Score = 38.5 bits (88), Expect = 0.020, Method: Composition-based stats.
Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 13/133 (9%)
Query: 16 AIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKR 75
A G +P S ++ + LLL+G+ +I+V+ I T + SG ER +
Sbjct: 759 AFLQGFHMFIPPSLIQLFDEYELELLLSGMPEIDVSDWIKNTEYT--SG--YEREDPVIQ 814
Query: 76 WLWSIVEKMTHLERMDL-----GCAIAIRAGIFDVVPASCLENLT----PEDFRLLLNGV 126
W W +VE +T ER+ L G + G +++ S L+N T P LL
Sbjct: 815 WFWEVVEDITPEERVLLLQFVTGSSRVPHGGFANIMGGSGLQNFTIAAVPYTPNLLPTSS 874
Query: 127 GDINVTVLISYTS 139
IN+ L Y S
Sbjct: 875 TCINMLKLPEYPS 887
Score = 34.7 bits (78), Expect = 0.36, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 97 AIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKR 156
A G +P S ++ + LLL+G+ +I+V+ I T + SG ER +
Sbjct: 759 AFLQGFHMFIPPSLIQLFDEYELELLLSGMPEIDVSDWIKNTEYT--SG--YEREDPVIQ 814
Query: 157 WLWSIVEKMTHLERMDL 173
W W +VE +T ER+ L
Sbjct: 815 WFWEVVEDITPEERVLL 831
>sp|O95714|HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2
Length = 4834
Score = 38.5 bits (88), Expect = 0.020, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 16 AIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKR 75
A+R G+ VVP L T + ++ G DI + +L S ++ + EPS LI+
Sbjct: 4648 AVREGMARVVPVPLLSLFTGYELETMVCGSPDIPLHLLKSVATY--KGIEPSASLIQ--- 4702
Query: 76 WLWSIVEKMTHLER 89
W W ++E ++ ER
Sbjct: 4703 WFWEVMESFSNTER 4716
Score = 38.5 bits (88), Expect = 0.020, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 97 AIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKR 156
A+R G+ VVP L T + ++ G DI + +L S ++ + EPS LI+
Sbjct: 4648 AVREGMARVVPVPLLSLFTGYELETMVCGSPDIPLHLLKSVATY--KGIEPSASLIQ--- 4702
Query: 157 WLWSIVEKMTHLER 170
W W ++E ++ ER
Sbjct: 4703 WFWEVMESFSNTER 4716
>sp|Q4U2R1|HERC2_MOUSE E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3
Length = 4836
Score = 38.1 bits (87), Expect = 0.032, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 16 AIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKR 75
A+R G+ VVP L T + ++ G DI + +L S ++ + EPS L++
Sbjct: 4650 AVREGMARVVPVPLLSLFTGYELETMVCGSPDIPLHLLKSVATY--KGIEPSASLVQ--- 4704
Query: 76 WLWSIVEKMTHLER 89
W W ++E ++ ER
Sbjct: 4705 WFWEVMESFSNTER 4718
Score = 38.1 bits (87), Expect = 0.032, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 97 AIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKR 156
A+R G+ VVP L T + ++ G DI + +L S ++ + EPS L++
Sbjct: 4650 AVREGMARVVPVPLLSLFTGYELETMVCGSPDIPLHLLKSVATY--KGIEPSASLVQ--- 4704
Query: 157 WLWSIVEKMTHLER 170
W W ++E ++ ER
Sbjct: 4705 WFWEVMESFSNTER 4718
>sp|O15033|K0317_HUMAN Protein KIAA0317 OS=Homo sapiens GN=KIAA0317 PE=2 SV=3
Length = 823
Score = 37.7 bits (86), Expect = 0.034, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 20 GIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKRWLWS 79
G+ ++VP + L + LL+ G GDI+V+ ++ + S E+++ RW W+
Sbjct: 682 GLNELVPENLLAIFDENELELLMCGTGDISVSDFKAHAVVVGGSWHFREKVM---RWFWT 738
Query: 80 IVEKMTHLE 88
+V +T E
Sbjct: 739 VVSSLTQEE 747
Score = 37.7 bits (86), Expect = 0.034, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 101 GIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKRWLWS 160
G+ ++VP + L + LL+ G GDI+V+ ++ + S E+++ RW W+
Sbjct: 682 GLNELVPENLLAIFDENELELLMCGTGDISVSDFKAHAVVVGGSWHFREKVM---RWFWT 738
Query: 161 IVEKMTHLE 169
+V +T E
Sbjct: 739 VVSSLTQEE 747
>sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster
GN=HERC2 PE=1 SV=3
Length = 4912
Score = 37.4 bits (85), Expect = 0.047, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 16 AIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKR 75
A+R G+ V+P L + + + ++ G DI + +L S ++ + +PS L+
Sbjct: 4737 AVRDGMSKVIPVPLLSLFSAAELQAMVCGSPDIPLGLLKSVATY--KGFDPSSALVT--- 4791
Query: 76 WLWSIVEKMTHLER 89
W W ++E+ T+ ER
Sbjct: 4792 WFWEVMEEFTNQER 4805
Score = 37.4 bits (85), Expect = 0.047, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 97 AIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKR 156
A+R G+ V+P L + + + ++ G DI + +L S ++ + +PS L+
Sbjct: 4737 AVRDGMSKVIPVPLLSLFSAAELQAMVCGSPDIPLGLLKSVATY--KGFDPSSALVT--- 4791
Query: 157 WLWSIVEKMTHLER 170
W W ++E+ T+ ER
Sbjct: 4792 WFWEVMEEFTNQER 4805
>sp|Q28BK1|HACE1_XENTR E3 ubiquitin-protein ligase HACE1 OS=Xenopus tropicalis GN=hace1
PE=2 SV=1
Length = 912
Score = 35.4 bits (80), Expect = 0.17, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 9/101 (8%)
Query: 20 GIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKRWLWS 79
G +P S ++ + LLL+G+ +I+V + T + SG ER + +W W
Sbjct: 766 GFHMFIPPSLIQLFDEYELELLLSGMPEIDVNDWMKNTEYT--SG--YERDDQVIQWFWE 821
Query: 80 IVEKMTHLERMDL-----GCAIAIRAGIFDVVPASCLENLT 115
+V+++T ER+ L G + G ++ S L+N T
Sbjct: 822 VVQELTQEERVLLLQFVTGSSRVPHGGFAYIMGGSGLQNFT 862
Score = 33.9 bits (76), Expect = 0.59, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 101 GIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKRWLWS 160
G +P S ++ + LLL+G+ +I+V + T + SG ER + +W W
Sbjct: 766 GFHMFIPPSLIQLFDEYELELLLSGMPEIDVNDWMKNTEYT--SG--YERDDQVIQWFWE 821
Query: 161 IVEKMTHLERMDL 173
+V+++T ER+ L
Sbjct: 822 VVQELTQEERVLL 834
>sp|Q6DCL5|HACE1_XENLA E3 ubiquitin-protein ligase HACE1 OS=Xenopus laevis GN=hace1 PE=2
SV=1
Length = 944
Score = 35.4 bits (80), Expect = 0.17, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 9/101 (8%)
Query: 20 GIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKRWLWS 79
G +P S ++ + LLL+G+ +I+V + T + SG ER + +W W
Sbjct: 798 GFHMFIPPSLIQLFDEYELELLLSGMPEIDVNDWMKNTEYT--SG--YERDDQVIQWFWE 853
Query: 80 IVEKMTHLERMDL-----GCAIAIRAGIFDVVPASCLENLT 115
+V+++T ER+ L G + G ++ S L+N T
Sbjct: 854 VVQELTQEERVLLLQFVTGSSRVPHGGFAYIMGGSGLQNFT 894
Score = 33.9 bits (76), Expect = 0.59, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 101 GIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKRWLWS 160
G +P S ++ + LLL+G+ +I+V + T + SG ER + +W W
Sbjct: 798 GFHMFIPPSLIQLFDEYELELLLSGMPEIDVNDWMKNTEYT--SG--YERDDQVIQWFWE 853
Query: 161 IVEKMTHLERMDL 173
+V+++T ER+ L
Sbjct: 854 VVQELTQEERVLL 866
>sp|Q76N89|HECW1_HUMAN E3 ubiquitin-protein ligase HECW1 OS=Homo sapiens GN=HECW1 PE=1 SV=3
Length = 1606
Score = 34.3 bits (77), Expect = 0.44, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 67/150 (44%), Gaps = 16/150 (10%)
Query: 36 EDFRLLLNGVGDINVTVLISYTSFIDES--GEPSERLIKFKRWLWSIVEK--MTHLERM- 90
E+F L + D N+T ++ T ++E G+ +ER +K + EK ++ERM
Sbjct: 1385 EEFHQSLQWMKDNNITDILDLTFTVNEEVFGQVTERELKSGGANTQVTEKNKKEYIERMV 1444
Query: 91 ----DLGCAIAIRA---GIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDE 143
+ G A G ++VV + + + L++ G +I++ + T +
Sbjct: 1445 KWRVERGVVQQTEALVRGFYEVVDSRLVSVFDARELELVIAGTAEIDLNDWRNNTEY--R 1502
Query: 144 SGEPSERLIKFKRWLWSIVEKMTHLERMDL 173
G L+ RW W+ VE+ + +R+ L
Sbjct: 1503 GGYHDGHLVI--RWFWAAVERFNNEQRLRL 1530
>sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1
PE=1 SV=2
Length = 4861
Score = 33.9 bits (76), Expect = 0.48, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 10/87 (11%)
Query: 87 LERMDLGCAIAIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSF--IDES 144
L MD A A+R G+ +VP L LT + ++ G+ +I+V VL + +DE
Sbjct: 4692 LHEMDRQVA-AVREGMSWIVPVPLLSLLTAKQLEQMVCGMPEISVEVLKKVVRYREVDEQ 4750
Query: 145 GEPSERLIKFKRWLWSIVEKMTHLERM 171
+ +W W +E+ ++ ER+
Sbjct: 4751 HQ-------LVQWFWHTLEEFSNEERV 4770
Score = 32.7 bits (73), Expect = 1.1, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 9/77 (11%)
Query: 16 AIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSF--IDESGEPSERLIKF 73
A+R G+ +VP L LT + ++ G+ +I+V VL + +DE +
Sbjct: 4701 AVREGMSWIVPVPLLSLLTAKQLEQMVCGMPEISVEVLKKVVRYREVDEQHQ-------L 4753
Query: 74 KRWLWSIVEKMTHLERM 90
+W W +E+ ++ ER+
Sbjct: 4754 VQWFWHTLEEFSNEERV 4770
>sp|Q8K4P8|HECW1_MOUSE E3 ubiquitin-protein ligase HECW1 OS=Mus musculus GN=Hecw1 PE=2 SV=3
Length = 1604
Score = 33.9 bits (76), Expect = 0.51, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 67/150 (44%), Gaps = 16/150 (10%)
Query: 36 EDFRLLLNGVGDINVTVLISYTSFIDES--GEPSERLIKFKRWLWSIVEK--MTHLERM- 90
E+F L + D N+T ++ T ++E G+ +ER +K + EK ++ERM
Sbjct: 1383 EEFHQSLQWMKDNNITDILDLTFTVNEEVFGQVTERELKSGGANTQVTEKNKKEYIERMV 1442
Query: 91 ----DLGCAIAIRA---GIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDE 143
+ G A G ++VV + + + L++ G +I++ + T +
Sbjct: 1443 KWRVERGVVQQTEALLRGFYEVVDSRLVSVFDARELELVIAGTAEIDLNDWRNNTEY--R 1500
Query: 144 SGEPSERLIKFKRWLWSIVEKMTHLERMDL 173
G L+ RW W+ VE+ + +R+ L
Sbjct: 1501 GGYHDGHLVI--RWFWAAVERFNNEQRLRL 1528
>sp|Q9Y4D8|HECD4_HUMAN Probable E3 ubiquitin-protein ligase HECTD4 OS=Homo sapiens GN=HECTD4
PE=1 SV=5
Length = 3996
Score = 33.9 bits (76), Expect = 0.53, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 88 ERMDLGCAIAIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEP 147
E ++ C A+RAG+ ++P L L+P + L G+ IN+ L ++T + E
Sbjct: 3830 ELQNVECVTAVRAGLGSIIPLQLLTMLSPLEMELRTCGLPYINLEFLKAHTMYQVGLMET 3889
Query: 148 SERLIKFKRWLWSIVEKMTHLE 169
+ + + W +E T E
Sbjct: 3890 DQHI----EFFWGALEMFTQEE 3907
Score = 29.6 bits (65), Expect = 9.4, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Query: 16 AIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKR 75
A+RAG+ ++P L L+P + L G+ IN+ L ++T + E + +
Sbjct: 3839 AVRAGLGSIIPLQLLTMLSPLEMELRTCGLPYINLEFLKAHTMYQVGLMETDQHI----E 3894
Query: 76 WLWSIVEKMTHLE 88
+ W +E T E
Sbjct: 3895 FFWGALEMFTQEE 3907
>sp|Q5T447|HECD3_HUMAN E3 ubiquitin-protein ligase HECTD3 OS=Homo sapiens GN=HECTD3 PE=1
SV=1
Length = 861
Score = 32.7 bits (73), Expect = 1.2, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 16 AIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKR 75
A++AG+ VVP + L+ LT ++ + G ++ V L T F E EPS+ +++
Sbjct: 717 AMQAGLLKVVPQAVLDLLTWQELEKKVCGDPEVTVDALRKLTRF--EDFEPSDSRVQY-- 772
Query: 76 WLWSIVEKMTHLER 89
W + T+ +R
Sbjct: 773 -FWEALNNFTNEDR 785
Score = 32.7 bits (73), Expect = 1.2, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 97 AIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKR 156
A++AG+ VVP + L+ LT ++ + G ++ V L T F E EPS+ +++
Sbjct: 717 AMQAGLLKVVPQAVLDLLTWQELEKKVCGDPEVTVDALRKLTRF--EDFEPSDSRVQY-- 772
Query: 157 WLWSIVEKMTHLER 170
W + T+ +R
Sbjct: 773 -FWEALNNFTNEDR 785
>sp|P46934|NEDD4_HUMAN E3 ubiquitin-protein ligase NEDD4 OS=Homo sapiens GN=NEDD4 PE=1 SV=4
Length = 1319
Score = 32.7 bits (73), Expect = 1.2, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 16 AIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKR 75
A + G F+++P ++ + LL+ G+GD++V +T + ++G + + +
Sbjct: 1170 AFKEGFFELIPQDLIKIFDENELELLMCGLGDVDVNDWREHTKY--KNGYSANH--QVIQ 1225
Query: 76 WLWSIVEKMTHLERMDL 92
W W V M +R+ L
Sbjct: 1226 WFWKAVLMMDSEKRIRL 1242
Score = 32.7 bits (73), Expect = 1.2, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 97 AIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKR 156
A + G F+++P ++ + LL+ G+GD++V +T + ++G + + +
Sbjct: 1170 AFKEGFFELIPQDLIKIFDENELELLMCGLGDVDVNDWREHTKY--KNGYSANH--QVIQ 1225
Query: 157 WLWSIVEKMTHLERMDL 173
W W V M +R+ L
Sbjct: 1226 WFWKAVLMMDSEKRIRL 1242
>sp|Q3U487|HECD3_MOUSE E3 ubiquitin-protein ligase HECTD3 OS=Mus musculus GN=Hectd3 PE=1
SV=2
Length = 861
Score = 32.3 bits (72), Expect = 1.4, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 16 AIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKR 75
A++AG+ VVP + L+ LT ++ + G ++ V L T F E EPS+ +++
Sbjct: 717 AMQAGLLKVVPQAVLDLLTWQELEKKVCGDPEVTVDALRKLTRF--EDFEPSDTRVQY-- 772
Query: 76 WLWSIVEKMTHLER 89
W + T+ +R
Sbjct: 773 -FWEALNNFTNEDR 785
Score = 32.3 bits (72), Expect = 1.4, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 97 AIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKR 156
A++AG+ VVP + L+ LT ++ + G ++ V L T F E EPS+ +++
Sbjct: 717 AMQAGLLKVVPQAVLDLLTWQELEKKVCGDPEVTVDALRKLTRF--EDFEPSDTRVQY-- 772
Query: 157 WLWSIVEKMTHLER 170
W + T+ +R
Sbjct: 773 -FWEALNNFTNEDR 785
>sp|F8W2M1|HACE1_DANRE E3 ubiquitin-protein ligase HACE1 OS=Danio rerio GN=hace1 PE=3 SV=2
Length = 904
Score = 31.6 bits (70), Expect = 2.4, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 10/80 (12%)
Query: 16 AIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVL---ISYTSFIDESGEPSERLIK 72
A G +P S ++ + LLL+G+ +I+V YTS D EP
Sbjct: 754 AFLQGFHTFIPPSLIQLFDEYELELLLSGMPEIDVMDWKRNTEYTSGYDLQ-EP------ 806
Query: 73 FKRWLWSIVEKMTHLERMDL 92
+W W +VE +T ER+ L
Sbjct: 807 VIQWFWEVVENLTQEERVLL 826
Score = 31.6 bits (70), Expect = 2.4, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 10/80 (12%)
Query: 97 AIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVL---ISYTSFIDESGEPSERLIK 153
A G +P S ++ + LLL+G+ +I+V YTS D EP
Sbjct: 754 AFLQGFHTFIPPSLIQLFDEYELELLLSGMPEIDVMDWKRNTEYTSGYDLQ-EP------ 806
Query: 154 FKRWLWSIVEKMTHLERMDL 173
+W W +VE +T ER+ L
Sbjct: 807 VIQWFWEVVENLTQEERVLL 826
>sp|P46935|NEDD4_MOUSE E3 ubiquitin-protein ligase NEDD4 OS=Mus musculus GN=Nedd4 PE=1
SV=3
Length = 887
Score = 31.2 bits (69), Expect = 3.8, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 16 AIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKR 75
A + G F+++P ++ + LL+ G+GD++V +T + + + +
Sbjct: 738 AFKEGFFELIPQDLIKIFDENELELLMCGLGDVDVNDWREHTKYKNGYSMNHQVI----H 793
Query: 76 WLWSIVEKMTHLERMDL 92
W W V M +R+ L
Sbjct: 794 WFWKAVWMMDSEKRIRL 810
Score = 31.2 bits (69), Expect = 3.8, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 97 AIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKR 156
A + G F+++P ++ + LL+ G+GD++V +T + + + +
Sbjct: 738 AFKEGFFELIPQDLIKIFDENELELLMCGLGDVDVNDWREHTKYKNGYSMNHQVI----H 793
Query: 157 WLWSIVEKMTHLERMDL 173
W W V M +R+ L
Sbjct: 794 WFWKAVWMMDSEKRIRL 810
>sp|A9JRZ0|SMUF2_DANRE E3 ubiquitin-protein ligase SMURF2 OS=Danio rerio GN=smurf2 PE=2
SV=1
Length = 765
Score = 31.2 bits (69), Expect = 3.9, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Query: 96 IAIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFK 155
+A++ G +V+P L+ ++ L++ G+G I++ S T + P ++K
Sbjct: 616 LALQKGFNEVIPQHLLKAFDEKELELIVCGLGKIDINDWKSNTRL--KHCTPDSNIVK-- 671
Query: 156 RWLWSIVEKMTHLERMDL 173
W W VE R L
Sbjct: 672 -WFWRAVESYDEERRARL 688
>sp|Q62940|NEDD4_RAT E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus GN=Nedd4
PE=1 SV=1
Length = 887
Score = 30.8 bits (68), Expect = 4.8, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 16 AIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKR 75
A + G F+++P ++ + LL+ G+GD++V +T + + + +
Sbjct: 738 AFKEGFFELIPQDLIKIFDENELELLMCGLGDVDVNDWREHTKYKNGYSLNHQVI----H 793
Query: 76 WLWSIVEKMTHLERMDL 92
W W V M +R+ L
Sbjct: 794 WFWKAVLMMDSEKRIRL 810
Score = 30.8 bits (68), Expect = 4.8, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 97 AIRAGIFDVVPASCLENLTPEDFRLLLNGVGDINVTVLISYTSFIDESGEPSERLIKFKR 156
A + G F+++P ++ + LL+ G+GD++V +T + + + +
Sbjct: 738 AFKEGFFELIPQDLIKIFDENELELLMCGLGDVDVNDWREHTKYKNGYSLNHQVI----H 793
Query: 157 WLWSIVEKMTHLERMDL 173
W W V M +R+ L
Sbjct: 794 WFWKAVLMMDSEKRIRL 810
>sp|P96921|EX5C_MYCTU Exodeoxyribonuclease V gamma chain OS=Mycobacterium tuberculosis
GN=recC PE=3 SV=1
Length = 1097
Score = 30.8 bits (68), Expect = 5.0, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 12/66 (18%)
Query: 94 CAIAIRAGIF---------DVV---PASCLENLTPEDFRLLLNGVGDINVTVLISYTSFI 141
C + + G+F DV+ P + ++ ED +LLL+ +G T++I+YT
Sbjct: 645 CLVGLDDGVFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGAD 704
Query: 142 DESGEP 147
+ +G+P
Sbjct: 705 ERTGQP 710
>sp|Q9PMA7|NUOL_CAMJE NADH-quinone oxidoreductase subunit L OS=Campylobacter jejuni
subsp. jejuni serotype O:2 (strain NCTC 11168) GN=nuoL
PE=3 SV=1
Length = 596
Score = 30.4 bits (67), Expect = 5.6, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 47 DINVTVLISYTSFIDESGEPSERLIKFKRWLWSIVEKMTHLERMDLGCAIAIRAGIFDVV 106
D N +LI+ FI G+ ++ F WL + T + + + A + AG++ V+
Sbjct: 200 DHNALILIATCLFIGAMGKSAQ--FPFHTWLADAMAGPTPVSAL-IHAATMVTAGVYLVI 256
Query: 107 PASCLENLTPE 117
AS L +L PE
Sbjct: 257 RASTLYDLVPE 267
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,769,562
Number of Sequences: 539616
Number of extensions: 2717608
Number of successful extensions: 5713
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 5673
Number of HSP's gapped (non-prelim): 66
length of query: 173
length of database: 191,569,459
effective HSP length: 109
effective length of query: 64
effective length of database: 132,751,315
effective search space: 8496084160
effective search space used: 8496084160
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)