Query psy12148
Match_columns 116
No_of_seqs 118 out of 474
Neff 6.5
Searched_HMMs 13730
Date Fri Aug 16 19:57:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12148.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/12148hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ansa_ g.11.1.1 (A:) Neurotox 75.0 0.41 3E-05 22.6 0.6 9 78-86 10-18 (27)
2 d1kj6a_ g.9.1.1 (A:) Beta-defe 42.5 2.4 0.00017 22.3 -0.1 14 91-105 7-20 (45)
3 d1ewsa_ g.9.1.1 (A:) Alpha-def 32.6 6.6 0.00048 18.8 0.7 12 85-96 18-29 (32)
4 d2axti1 f.23.37.1 (I:1-35) Pho 16.1 66 0.0048 15.6 4.3 12 57-68 23-34 (35)
5 d2p4ka1 a.2.11.1 (A:1-83) Mn s 12.1 4.3 0.00031 23.8 -3.4 15 82-96 65-79 (83)
6 d1q5wa_ g.41.11.1 (A:) Npl4 {R 9.5 32 0.0024 16.3 0.1 8 77-84 10-17 (31)
7 d1mnga1 a.2.11.1 (A:1-92) Mn s 9.4 6.3 0.00046 23.5 -3.4 16 81-96 73-88 (92)
8 d1ma1a1 a.2.11.1 (A:4-91) Fe s 9.2 6.4 0.00047 23.3 -3.4 16 81-96 67-82 (88)
9 d1gv3a1 a.2.11.1 (A:25-126) Mn 9.1 6.7 0.00049 23.9 -3.4 17 80-96 82-98 (102)
10 d1unfx1 a.2.11.1 (X:14-104) Fe 8.7 7 0.00051 23.2 -3.4 16 81-96 72-87 (91)
No 1
>d1ansa_ g.11.1.1 (A:) Neurotoxin III (ATX III) {Sea anemone (Anemonia sulcata) [TaxId: 6108]}
Probab=74.95 E-value=0.41 Score=22.56 Aligned_cols=9 Identities=0% Similarity=-0.289 Sum_probs=7.6
Q ss_pred cccccCCcc
Q psy12148 78 VAYFLNTTT 86 (116)
Q Consensus 78 HCpWinNCV 86 (116)
-|||..||-
T Consensus 10 gcpwgqncy 18 (27)
T d1ansa_ 10 GCPWGQNCY 18 (27)
T ss_dssp TCSSSCSSC
T ss_pred CCccccccc
Confidence 599999984
No 2
>d1kj6a_ g.9.1.1 (A:) Beta-defensin, BD {Human (Homo sapiens), HBD3 [TaxId: 9606]}
Probab=42.50 E-value=2.4 Score=22.28 Aligned_cols=14 Identities=29% Similarity=0.472 Sum_probs=10.0
Q ss_pred ceeeehhhhhhhhcC
Q psy12148 91 SALECRVSTAAKHAA 105 (116)
Q Consensus 91 ~ryf~~~~~~~~~~~ 105 (116)
|||||+|-. ..||+
T Consensus 7 qryyCriR~-GRCA~ 20 (45)
T d1kj6a_ 7 QKYYCRVRG-GRCAV 20 (45)
T ss_dssp TTTHHHHHC-CEEES
T ss_pred hhhheeecC-CcEEE
Confidence 899999864 34554
No 3
>d1ewsa_ g.9.1.1 (A:) Alpha-defensin rk-1 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=32.62 E-value=6.6 Score=18.78 Aligned_cols=12 Identities=25% Similarity=0.443 Sum_probs=9.9
Q ss_pred ccccCCceeeeh
Q psy12148 85 TTTTYNSALECR 96 (116)
Q Consensus 85 CVG~~N~ryf~~ 96 (116)
=.|.+|.||-|+
T Consensus 18 scglfnskyicc 29 (32)
T d1ewsa_ 18 SCGLFNSKYICC 29 (32)
T ss_dssp CCSSSSCSEEEE
T ss_pred ccccccceeEEe
Confidence 349999999886
No 4
>d2axti1 f.23.37.1 (I:1-35) Photosystem II reaction center protein I, PsbI {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=16.10 E-value=66 Score=15.58 Aligned_cols=12 Identities=17% Similarity=0.210 Sum_probs=8.7
Q ss_pred HhhcCCCCCCCC
Q psy12148 57 GVTTMPGYPPQG 68 (116)
Q Consensus 57 ai~tdPG~vP~~ 68 (116)
-.-.|||+.|..
T Consensus 23 FLSnDP~RnP~r 34 (35)
T d2axti1 23 FLSGDPARNPKR 34 (35)
T ss_dssp HHTTCTTCSSCC
T ss_pred hccCCCCCCCCC
Confidence 345799998864
No 5
>d2p4ka1 a.2.11.1 (A:1-83) Mn superoxide dismutase (MnSOD) {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.12 E-value=4.3 Score=23.85 Aligned_cols=15 Identities=7% Similarity=-0.144 Sum_probs=10.6
Q ss_pred cCCccccCCceeeeh
Q psy12148 82 LNTTTTTYNSALECR 96 (116)
Q Consensus 82 inNCVG~~N~ryf~~ 96 (116)
.||--|++||.+|-.
T Consensus 65 ~nN~gg~~NH~~fW~ 79 (83)
T d2p4ka1 65 KFNGGGHINHSIFWT 79 (83)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred ccccchHhhHHHHhc
Confidence 467778888877643
No 6
>d1q5wa_ g.41.11.1 (A:) Npl4 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=9.52 E-value=32 Score=16.31 Aligned_cols=8 Identities=25% Similarity=0.418 Sum_probs=6.0
Q ss_pred ccccccCC
Q psy12148 77 PVAYFLNT 84 (116)
Q Consensus 77 HHCpWinN 84 (116)
.||.++|.
T Consensus 10 ~HCTf~N~ 17 (31)
T d1q5wa_ 10 QHCTFMNQ 17 (31)
T ss_dssp SSSCCEEC
T ss_pred eeeeeecC
Confidence 58888874
No 7
>d1mnga1 a.2.11.1 (A:1-92) Mn superoxide dismutase (MnSOD) {Thermus thermophilus [TaxId: 274]}
Probab=9.37 E-value=6.3 Score=23.51 Aligned_cols=16 Identities=25% Similarity=0.150 Sum_probs=11.8
Q ss_pred ccCCccccCCceeeeh
Q psy12148 81 FLNTTTTTYNSALECR 96 (116)
Q Consensus 81 WinNCVG~~N~ryf~~ 96 (116)
-.||--|++||.+|-.
T Consensus 73 ~~nn~gg~~NH~~fW~ 88 (92)
T d1mnga1 73 VRNNGGGHLNHSLFWR 88 (92)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHhchhHHHHHHHHc
Confidence 4577888889888753
No 8
>d1ma1a1 a.2.11.1 (A:4-91) Fe superoxide dismutase (FeSOD) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=9.17 E-value=6.4 Score=23.28 Aligned_cols=16 Identities=0% Similarity=-0.351 Sum_probs=11.4
Q ss_pred ccCCccccCCceeeeh
Q psy12148 81 FLNTTTTTYNSALECR 96 (116)
Q Consensus 81 WinNCVG~~N~ryf~~ 96 (116)
-.||.-|++||.+|-.
T Consensus 67 i~~n~ggh~NHs~fW~ 82 (88)
T d1ma1a1 67 LSFHVGGYVLHLFFWG 82 (88)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHhc
Confidence 3467788888887754
No 9
>d1gv3a1 a.2.11.1 (A:25-126) Mn superoxide dismutase (MnSOD) {Anabaena sp. [TaxId: 1167]}
Probab=9.10 E-value=6.7 Score=23.88 Aligned_cols=17 Identities=12% Similarity=0.008 Sum_probs=13.2
Q ss_pred cccCCccccCCceeeeh
Q psy12148 80 YFLNTTTTTYNSALECR 96 (116)
Q Consensus 80 pWinNCVG~~N~ryf~~ 96 (116)
...||--|++||.+|-.
T Consensus 82 ~v~nNagg~~NH~~fW~ 98 (102)
T d1gv3a1 82 TVRNNGGGHLNHTIFWQ 98 (102)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhhHHHHHHHHh
Confidence 45688889999988754
No 10
>d1unfx1 a.2.11.1 (X:14-104) Fe superoxide dismutase (FeSOD) {Cowpea (Vigna unguiculata) [TaxId: 3917]}
Probab=8.65 E-value=7 Score=23.21 Aligned_cols=16 Identities=13% Similarity=0.212 Sum_probs=12.4
Q ss_pred ccCCccccCCceeeeh
Q psy12148 81 FLNTTTTTYNSALECR 96 (116)
Q Consensus 81 WinNCVG~~N~ryf~~ 96 (116)
-.||--|++||.+|-.
T Consensus 72 ~~Nn~gg~~NHslfW~ 87 (91)
T d1unfx1 72 AFNNAAQVWNHDFFWE 87 (91)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHhcchhHhhHHHHHh
Confidence 4588888999988754
Done!