BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12149
(243 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9V7D2|VATD1_DROME V-type proton ATPase subunit D 1 OS=Drosophila melanogaster
GN=Vha36-1 PE=2 SV=1
Length = 246
Score = 408 bits (1049), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/246 (82%), Positives = 223/246 (90%), Gaps = 3/246 (1%)
Query: 1 MSGKERLPIFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGE 60
MSGK+RLPIFPSRGAQ LMK+RL GAQKGH LLKKKADALQMRFR+IL KIIETKTLMG+
Sbjct: 1 MSGKDRLPIFPSRGAQMLMKARLAGAQKGHGLLKKKADALQMRFRLILGKIIETKTLMGD 60
Query: 61 VMKEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGTDTYE 120
VMKEAAFSLAEAKFT+GD NQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDG+DTYE
Sbjct: 61 VMKEAAFSLAEAKFTSGDINQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGSDTYE 120
Query: 121 LAGLARGGQQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIPRI 180
LAGLARGGQQLAKLKKNYQ+A+KLLVELASLQTSFVTLD+VIKITNRRVNAIEHVIIPRI
Sbjct: 121 LAGLARGGQQLAKLKKNYQSAVKLLVELASLQTSFVTLDEVIKITNRRVNAIEHVIIPRI 180
Query: 181 EKTLAYIISELDELEREEFYRLKKIQDKKKVIKAASEAFRK---SRKYDEEQAFNMLEEE 237
++TLAYIISELDELEREEFYRLKKIQDKK+ + ++A + + D Q N+L+E
Sbjct: 181 DRTLAYIISELDELEREEFYRLKKIQDKKREARIKADAKKAELLQQGIDVRQQANILDEG 240
Query: 238 DQDILF 243
D D+LF
Sbjct: 241 DDDVLF 246
>sp|Q9NEF6|VATD2_DROME Probable V-type proton ATPase subunit D 2 OS=Drosophila
melanogaster GN=Vha36-3 PE=3 SV=1
Length = 249
Score = 393 bits (1009), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/249 (77%), Positives = 220/249 (88%), Gaps = 6/249 (2%)
Query: 1 MSGKERLPIFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGE 60
M+ K+RLPIFPSRGAQ+LMKSRL GA KGH LLKKKADALQMRFR+IL KIIETKTLMG+
Sbjct: 1 MAAKDRLPIFPSRGAQTLMKSRLAGATKGHGLLKKKADALQMRFRLILGKIIETKTLMGQ 60
Query: 61 VMKEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGTDTYE 120
VMKEAAFSLAE KFTTGD NQ+VLQNVTKAQIKIRTKKDNVAGVTLP+FE Y DG DTYE
Sbjct: 61 VMKEAAFSLAEVKFTTGDINQIVLQNVTKAQIKIRTKKDNVAGVTLPIFEPYTDGVDTYE 120
Query: 121 LAGLARGGQQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIPRI 180
LAGLARGGQQLAKLKKNYQ+A++LLV+LASLQTSFVTLDDVIK+TNRRVNAIEHVIIPRI
Sbjct: 121 LAGLARGGQQLAKLKKNYQSAVRLLVQLASLQTSFVTLDDVIKVTNRRVNAIEHVIIPRI 180
Query: 181 EKTLAYIISELDELEREEFYRLKKIQDKKKVIKAASEAFRKSRKY-----DEEQAFNMLE 235
+T+ YIISELDELEREEFYRLKKIQDKK+ + AS+ R ++ + ++ N+L+
Sbjct: 181 NRTIEYIISELDELEREEFYRLKKIQDKKREARKASDKLRAEQRLLGQMAEAQEVQNILD 240
Query: 236 EE-DQDILF 243
E+ D+D+LF
Sbjct: 241 EDGDEDLLF 249
>sp|Q9U0S4|VATD_MANSE V-type proton ATPase subunit D OS=Manduca sexta PE=2 SV=1
Length = 246
Score = 385 bits (988), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/246 (83%), Positives = 227/246 (92%), Gaps = 3/246 (1%)
Query: 1 MSGKERLPIFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGE 60
MSGK+RL IFPSRGAQ LMK RL GAQKGH LLKKKADALQ+RFR+ILSKIIETKTLMGE
Sbjct: 1 MSGKDRLAIFPSRGAQMLMKGRLAGAQKGHGLLKKKADALQVRFRLILSKIIETKTLMGE 60
Query: 61 VMKEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGTDTYE 120
VMKEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKIR+KKDNVAGVTLP+FESYQDG+DTYE
Sbjct: 61 VMKEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTYE 120
Query: 121 LAGLARGGQQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIPRI 180
LAGLARGGQQLAKLKKN+Q+A+KLLVELASLQTSFVTLD+VIKITNRRVNAIEHVIIPR+
Sbjct: 121 LAGLARGGQQLAKLKKNFQSAVKLLVELASLQTSFVTLDEVIKITNRRVNAIEHVIIPRL 180
Query: 181 EKTLAYIISELDELEREEFYRLKKIQDKKKVIKAASEAFRKSRKY---DEEQAFNMLEEE 237
E+TLAYIISELDELEREEFYRLKKIQDKKK+IK +EA + + + D + N+L+E
Sbjct: 181 ERTLAYIISELDELEREEFYRLKKIQDKKKIIKDKAEAKKAALRAAGQDLRDSANLLDEG 240
Query: 238 DQDILF 243
D+D+LF
Sbjct: 241 DEDLLF 246
>sp|Q5RCS8|VATD_PONAB V-type proton ATPase subunit D OS=Pongo abelii GN=ATP6V1D PE=2 SV=1
Length = 247
Score = 361 bits (927), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 181/246 (73%), Positives = 212/246 (86%), Gaps = 3/246 (1%)
Query: 1 MSGKERLPIFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGE 60
MSGK+R+ IFPSR AQ++MK+RLKGAQ G +LLKKK+DAL +RFR IL KIIETK LMGE
Sbjct: 1 MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGE 60
Query: 61 VMKEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGTDTYE 120
VM+EAAFSLAEAKFT GDF+ V+QNV KAQ+KIR KKDNVAGVTLPVFE Y +GTD+YE
Sbjct: 61 VMREAAFSLAEAKFTAGDFSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYE 120
Query: 121 LAGLARGGQQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIPRI 180
L GLARGG+QLAKLK+NY A++LLVELASLQTSFVTLD+ IKITNRRVNAIEHVIIPRI
Sbjct: 121 LTGLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPRI 180
Query: 181 EKTLAYIISELDELEREEFYRLKKIQDKKKVIKAASEAFRKSRKYDEE--QAFNML-EEE 237
E+TLAYII+ELDE EREEFYRLKKIQ+KKK++K SE + R+ E + N+L EE+
Sbjct: 181 ERTLAYIITELDEREREEFYRLKKIQEKKKILKEKSEKDLEQRRAAGEVLEPANLLAEEK 240
Query: 238 DQDILF 243
D+D+LF
Sbjct: 241 DEDLLF 246
>sp|Q9Y5K8|VATD_HUMAN V-type proton ATPase subunit D OS=Homo sapiens GN=ATP6V1D PE=1 SV=1
Length = 247
Score = 361 bits (927), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 181/246 (73%), Positives = 212/246 (86%), Gaps = 3/246 (1%)
Query: 1 MSGKERLPIFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGE 60
MSGK+R+ IFPSR AQ++MK+RLKGAQ G +LLKKK+DAL +RFR IL KIIETK LMGE
Sbjct: 1 MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGE 60
Query: 61 VMKEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGTDTYE 120
VM+EAAFSLAEAKFT GDF+ V+QNV KAQ+KIR KKDNVAGVTLPVFE Y +GTD+YE
Sbjct: 61 VMREAAFSLAEAKFTAGDFSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYE 120
Query: 121 LAGLARGGQQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIPRI 180
L GLARGG+QLAKLK+NY A++LLVELASLQTSFVTLD+ IKITNRRVNAIEHVIIPRI
Sbjct: 121 LTGLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPRI 180
Query: 181 EKTLAYIISELDELEREEFYRLKKIQDKKKVIKAASEAFRKSRKYDEE--QAFNML-EEE 237
E+TLAYII+ELDE EREEFYRLKKIQ+KKK++K SE + R+ E + N+L EE+
Sbjct: 181 ERTLAYIITELDEREREEFYRLKKIQEKKKILKEKSEKDLEQRRAAGEVLEPANLLAEEK 240
Query: 238 DQDILF 243
D+D+LF
Sbjct: 241 DEDLLF 246
>sp|O97755|VATD_RABIT V-type proton ATPase subunit D OS=Oryctolagus cuniculus GN=ATP6V1D
PE=2 SV=1
Length = 247
Score = 360 bits (924), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 180/246 (73%), Positives = 211/246 (85%), Gaps = 3/246 (1%)
Query: 1 MSGKERLPIFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGE 60
MSGK+R+ IFPSR AQ++MK+RLKGAQ G +LLKKK+DAL +RFR IL KIIETK LMGE
Sbjct: 1 MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGE 60
Query: 61 VMKEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGTDTYE 120
VM+EAAFSLAEAKFT GDF+ +QNV KAQ+KIR KKDNVAGVTLPVFE Y +GTD+YE
Sbjct: 61 VMREAAFSLAEAKFTAGDFSTTAIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYE 120
Query: 121 LAGLARGGQQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIPRI 180
L GLARGG+QLAKLK+NY A++LLVELASLQTSFVTLD+ IKITNRRVNAIEHVIIPRI
Sbjct: 121 LTGLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPRI 180
Query: 181 EKTLAYIISELDELEREEFYRLKKIQDKKKVIKAASEAFRKSRKYDEE--QAFNML-EEE 237
E+TLAYII+ELDE EREEFYRLKKIQ+KKK++K SE + R+ E + N+L EE+
Sbjct: 181 ERTLAYIITELDEREREEFYRLKKIQEKKKILKEKSEKDLEQRRAAGEVMEPANLLAEEK 240
Query: 238 DQDILF 243
D+D+LF
Sbjct: 241 DEDLLF 246
>sp|P39942|VATD_BOVIN V-type proton ATPase subunit D OS=Bos taurus GN=ATP6V1D PE=1 SV=1
Length = 247
Score = 358 bits (918), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 179/246 (72%), Positives = 211/246 (85%), Gaps = 3/246 (1%)
Query: 1 MSGKERLPIFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGE 60
MSGK+R+ IFPSR AQ++MK+RLKGAQ G +LLKKK+DAL +RFR IL KIIETK LMGE
Sbjct: 1 MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGE 60
Query: 61 VMKEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGTDTYE 120
VM+EAAFSLAEAKFT GDF+ V+QNV KAQ+KIR KKDNVAGVTLPVFE Y +GTD+YE
Sbjct: 61 VMREAAFSLAEAKFTAGDFSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYE 120
Query: 121 LAGLARGGQQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIPRI 180
L GLARGG+QLAKLK+NY A++LLVELASLQTSFVTLD+ IKITNRRVN IEHVIIPRI
Sbjct: 121 LTGLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNRIEHVIIPRI 180
Query: 181 EKTLAYIISELDELEREEFYRLKKIQDKKKVIKAASEAFRKSRKYDEE--QAFNML-EEE 237
E+TLAYII+ELDE EREEFYRLKKIQ+KKK++K S+ + R+ E + N+L EE+
Sbjct: 181 ERTLAYIITELDEREREEFYRLKKIQEKKKILKEKSDKDLEQRRAAGEVIEPANLLAEEK 240
Query: 238 DQDILF 243
D+D+LF
Sbjct: 241 DEDLLF 246
>sp|P57746|VATD_MOUSE V-type proton ATPase subunit D OS=Mus musculus GN=Atp6v1d PE=1 SV=1
Length = 247
Score = 338 bits (866), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 181/246 (73%), Positives = 211/246 (85%), Gaps = 3/246 (1%)
Query: 1 MSGKERLPIFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGE 60
MSGK+R+ IFPSR AQ++MK+RLKGAQ G +LLKKK+DAL +RFR IL KIIETK LMGE
Sbjct: 1 MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGE 60
Query: 61 VMKEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGTDTYE 120
VM+EAAFSLAEAKFT GDF+ V+QNV KAQ+KIR KKDNVAGVTLPVFE Y +GTD+YE
Sbjct: 61 VMREAAFSLAEAKFTAGDFSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYE 120
Query: 121 LAGLARGGQQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIPRI 180
L GLARGG+QLAKLK+NY A++LLVELASLQTSFVTLD+ IKITNRRVNAIEHVIIPRI
Sbjct: 121 LTGLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPRI 180
Query: 181 EKTLAYIISELDELEREEFYRLKKIQDKKKVIKAASEAFRKSRKYDEE--QAFNML-EEE 237
E+TLAYII+ELDE EREEFYRLKKIQ+KKK+IK E + R+ E + N+L EE+
Sbjct: 181 ERTLAYIITELDEREREEFYRLKKIQEKKKIIKEKFEKDLERRRAAGEVMEPANLLAEEK 240
Query: 238 DQDILF 243
D+D+LF
Sbjct: 241 DEDLLF 246
>sp|Q61IU3|VATD_CAEBR V-type proton ATPase subunit D OS=Caenorhabditis briggsae GN=vha-14
PE=3 SV=1
Length = 259
Score = 325 bits (832), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 155/229 (67%), Positives = 188/229 (82%)
Query: 2 SGKERLPIFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGEV 61
GK+R+ +FPSR AQ+LMK+RLKGAQKGHSLLKKKADAL +RFR IL KI+E K LMGEV
Sbjct: 5 GGKDRIAVFPSRMAQTLMKTRLKGAQKGHSLLKKKADALNLRFRDILKKIVENKVLMGEV 64
Query: 62 MKEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGTDTYEL 121
MKEAAFSLAEAKFT GDF+ V+QNV++AQ ++R KK+NV GV LPVF++YQDG D Y+L
Sbjct: 65 MKEAAFSLAEAKFTAGDFSHTVIQNVSQAQYRVRMKKENVVGVLLPVFDAYQDGPDAYDL 124
Query: 122 AGLARGGQQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIPRIE 181
GL +GG +A+LKKNY AI+LLVELA+LQT F+TLD+ IK+TNRRVNAIEHVIIPRIE
Sbjct: 125 TGLGKGGANIARLKKNYNKAIELLVELATLQTCFITLDEAIKVTNRRVNAIEHVIIPRIE 184
Query: 182 KTLAYIISELDELEREEFYRLKKIQDKKKVIKAASEAFRKSRKYDEEQA 230
TL YI++ELDE+EREEF+R+KKIQ KK +K A R +E+A
Sbjct: 185 NTLTYIVTELDEMEREEFFRMKKIQANKKKLKEQEAAQRALEGPPKEEA 233
>sp|P34462|VATD_CAEEL V-type proton ATPase subunit D OS=Caenorhabditis elegans GN=vha-14
PE=3 SV=1
Length = 257
Score = 323 bits (829), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 151/212 (71%), Positives = 182/212 (85%)
Query: 2 SGKERLPIFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGEV 61
GK+R+ +FPSR AQ+LMK+RLKGAQKGHSLLKKKADAL +RFR IL KI+E K LMGEV
Sbjct: 4 GGKDRIAVFPSRMAQTLMKTRLKGAQKGHSLLKKKADALNLRFRDILRKIVENKVLMGEV 63
Query: 62 MKEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGTDTYEL 121
MKEAAFSLAEAKFT GDF+ V+QNV++AQ ++R KK+NV GV LPVF++YQDG D Y+L
Sbjct: 64 MKEAAFSLAEAKFTAGDFSHTVIQNVSQAQYRVRMKKENVVGVFLPVFDAYQDGPDAYDL 123
Query: 122 AGLARGGQQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIPRIE 181
GL +GG +A+LKKNY AI+LLVELA+LQT F+TLD+ IK+TNRRVNAIEHVIIPRIE
Sbjct: 124 TGLGKGGANIARLKKNYNKAIELLVELATLQTCFITLDEAIKVTNRRVNAIEHVIIPRIE 183
Query: 182 KTLAYIISELDELEREEFYRLKKIQDKKKVIK 213
TL YI++ELDE+EREEF+R+KKIQ KK +K
Sbjct: 184 NTLTYIVTELDEMEREEFFRMKKIQANKKKLK 215
>sp|P57747|VATD_SUBDO V-type proton ATPase subunit D OS=Suberites domuncula GN=VATPD PE=2
SV=1
Length = 250
Score = 319 bits (817), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 152/202 (75%), Positives = 181/202 (89%)
Query: 1 MSGKERLPIFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGE 60
MSGK+R+ +FPSR A +LMK+RLKGAQKGHSLLK+KADAL +RFR IL KIIETKTLMGE
Sbjct: 1 MSGKDRINVFPSRMALTLMKARLKGAQKGHSLLKRKADALTLRFRQILGKIIETKTLMGE 60
Query: 61 VMKEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGTDTYE 120
VMKEA FSLAEAKF GDF+++VLQNV KA+I++ TKKDNVAGVTLPVFE+Y DG+DTYE
Sbjct: 61 VMKEATFSLAEAKFVAGDFSEMVLQNVDKAKIRLHTKKDNVAGVTLPVFETYSDGSDTYE 120
Query: 121 LAGLARGGQQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIPRI 180
L GL+RGGQ ++K K+ + A++LLVELASLQT+FVTLD+VIK+TNRRVNAIEHVIIP+I
Sbjct: 121 LTGLSRGGQLVSKCKEVFGKAVRLLVELASLQTAFVTLDEVIKVTNRRVNAIEHVIIPKI 180
Query: 181 EKTLAYIISELDELEREEFYRL 202
++TL+YI ELDE EREEFYRL
Sbjct: 181 QRTLSYISIELDEREREEFYRL 202
>sp|Q86A77|VATD_DICDI V-type proton ATPase subunit D OS=Dictyostelium discoideum
GN=atp6v1d PE=1 SV=1
Length = 257
Score = 247 bits (630), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 116/204 (56%), Positives = 161/204 (78%), Gaps = 2/204 (0%)
Query: 1 MSGKERLPIFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGE 60
MSGK RL IFP+R A ++MK++LKGA GHSLLKKK+DAL +RFR IL+ I+E K LMG
Sbjct: 1 MSGKNRLNIFPTRMALTVMKTKLKGAVTGHSLLKKKSDALTIRFRRILANIVENKQLMGT 60
Query: 61 VMKEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDG--TDT 118
M++A+FSLA AK+ G+F+ V++NV+ I ++ +NVAGV LP FE +G +++
Sbjct: 61 TMRDASFSLAAAKYAAGEFSNSVIENVSNPTIAVKMTTENVAGVHLPTFEKISEGVVSNS 120
Query: 119 YELAGLARGGQQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIP 178
EL GL++GGQQ+ K ++++ A++ L+ LASLQT+F+TLD+VIKITNRRVNAIE+V+ P
Sbjct: 121 QELTGLSKGGQQINKSRESHIKAVEALIALASLQTAFITLDEVIKITNRRVNAIEYVVKP 180
Query: 179 RIEKTLAYIISELDELEREEFYRL 202
++E T++YII+ELDE EREEFYRL
Sbjct: 181 KLENTISYIITELDESEREEFYRL 204
>sp|O59941|VATD_NEUCR V-type proton ATPase subunit D OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=vma-8 PE=2 SV=2
Length = 264
Score = 235 bits (599), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 126/264 (47%), Positives = 178/264 (67%), Gaps = 21/264 (7%)
Query: 1 MSGK-ERLPIFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMG 59
MSG +R +FP+R + +MK++LKGA+ GHSLLK+K++AL RFR I +I E K MG
Sbjct: 1 MSGAADREAVFPTRQSLGIMKAKLKGAETGHSLLKRKSEALTKRFREITRRIDEAKRKMG 60
Query: 60 EVMKEAAFSLAEAKFTTG-DFNQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQ-DGTD 117
VM+ A+ SLAE + G + + ++ A+ +IR K++NV+GV LP FE+YQ +G D
Sbjct: 61 RVMQIASLSLAEVTYAVGGNIGYQIQESAKSARFRIRAKQENVSGVLLPAFEAYQAEGND 120
Query: 118 TYELAGLARGGQQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVII 177
+ + GL +GGQQ+ + ++ Y A++ LVELASLQT+FV LD+VIK+ NRRVNAIEHVII
Sbjct: 121 DFAMTGLGKGGQQVQRCRETYARAVEALVELASLQTAFVILDEVIKVVNRRVNAIEHVII 180
Query: 178 PRIEKTLAYIISELDELEREEFYRLKKIQDKKKVIKAASEAFRKSRKYDE---------- 227
PR E T+ YI SELDEL+REEFYRLKK+ KK+ A ++A K++K ++
Sbjct: 181 PRTENTIKYINSELDELDREEFYRLKKVAAKKQRDNAETDAQMKAKKAEQQRLALADSEN 240
Query: 228 ---EQAFN-----MLEEEDQDILF 243
EQ N + EED+D++F
Sbjct: 241 AEGEQTENTPADILAAEEDEDVIF 264
>sp|P32610|VATD_YEAST V-type proton ATPase subunit D OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=VMA8 PE=1 SV=1
Length = 256
Score = 232 bits (591), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 120/212 (56%), Positives = 159/212 (75%), Gaps = 3/212 (1%)
Query: 1 MSGKERLPIFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGE 60
MSG R +FP+R LMK++LKGA +G+SLLK+K++AL RFR I +I + K MG
Sbjct: 1 MSGN-REQVFPTRMTLGLMKTKLKGANQGYSLLKRKSEALTKRFRDITKRIDDAKQKMGR 59
Query: 61 VMKEAAFSLAEAKFTTG-DFNQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDG-TDT 118
VM+ AAFSLAE + TG + V ++V+ A+ K+R +++NV+GV L FESY D +
Sbjct: 60 VMQTAAFSLAEVSYATGENIGYQVQESVSTARFKVRARQENVSGVYLSQFESYIDPEIND 119
Query: 119 YELAGLARGGQQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIP 178
+ L GL RGGQQ+ + K+ Y A++ LVELASLQT+F+ LD+VIK+TNRRVNAIEHVIIP
Sbjct: 120 FRLTGLGRGGQQVQRAKEIYSRAVETLVELASLQTAFIILDEVIKVTNRRVNAIEHVIIP 179
Query: 179 RIEKTLAYIISELDELEREEFYRLKKIQDKKK 210
R E T+AYI SELDEL+REEFYRLKK+Q+KK+
Sbjct: 180 RTENTIAYINSELDELDREEFYRLKKVQEKKQ 211
>sp|P87220|VATD_CANAL V-type proton ATPase subunit D OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=VMA8 PE=3 SV=1
Length = 267
Score = 229 bits (583), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 118/208 (56%), Positives = 156/208 (75%), Gaps = 3/208 (1%)
Query: 1 MSGK-ERLPIFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMG 59
MSG R +FP+R +MKS+LKGAQ+GHSLLK+K++AL RFR I +I + K MG
Sbjct: 1 MSGAGNREQVFPTRMTLGVMKSKLKGAQQGHSLLKRKSEALTKRFRDITQRIDDAKRKMG 60
Query: 60 EVMKEAAFSLAEAKFTTGD-FNQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESY-QDGTD 117
VM+ AAFSLAE ++ TGD + V ++V KA+ ++ K++NV+GV LP F+S+ + +
Sbjct: 61 RVMQTAAFSLAEVQYATGDNISYQVQESVQKARFTVKAKQENVSGVFLPTFDSHINEDVN 120
Query: 118 TYELAGLARGGQQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVII 177
++L LARGGQQ+ K K Y A++ LVELASLQT+F+ LD+VIKITNRRVNAIEHVII
Sbjct: 121 DFKLTALARGGQQVQKAKLIYSKAVETLVELASLQTAFIILDEVIKITNRRVNAIEHVII 180
Query: 178 PRIEKTLAYIISELDELEREEFYRLKKI 205
PR E T+AYI ELDE++REEFYRLKK+
Sbjct: 181 PRTENTIAYINGELDEMDREEFYRLKKV 208
>sp|Q9XGM1|VATD_ARATH V-type proton ATPase subunit D OS=Arabidopsis thaliana GN=VHA-D
PE=1 SV=2
Length = 261
Score = 226 bits (575), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 111/212 (52%), Positives = 158/212 (74%), Gaps = 2/212 (0%)
Query: 1 MSGKE-RLPIFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMG 59
M+G+ RL + P+ +MK+RL GA +GH+LLKKK+DAL ++FR +L KI+ K MG
Sbjct: 1 MAGQNARLNVVPTVTMLGVMKARLVGATRGHALLKKKSDALTVQFRALLKKIVTAKESMG 60
Query: 60 EVMKEAAFSLAEAKFTTGD-FNQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGTDT 118
++MK ++F+L E K+ GD VVL+NV +A +K+R++ +N+AGV LP F+ + +G
Sbjct: 61 DMMKTSSFALTEVKYVAGDNVKHVVLENVKEATLKVRSRTENIAGVKLPKFDHFSEGETK 120
Query: 119 YELAGLARGGQQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIP 178
+L GLARGGQQ+ + Y AI++LVELASLQTSF+TLD+ IK TNRRVNA+E+V+ P
Sbjct: 121 NDLTGLARGGQQVRACRVAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 180
Query: 179 RIEKTLAYIISELDELEREEFYRLKKIQDKKK 210
++E T++YI ELDELERE+F+RLKKIQ K+
Sbjct: 181 KLENTISYIKGELDELEREDFFRLKKIQGYKR 212
>sp|O59823|VATD_SCHPO V-type proton ATPase subunit D OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=vma8 PE=1 SV=1
Length = 285
Score = 199 bits (507), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/212 (50%), Positives = 159/212 (75%), Gaps = 2/212 (0%)
Query: 1 MSGKERLPIFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGE 60
M+ K+R +FP+R + MK+RLKGAQ GHSLLK+K++AL+ RFR I+ I + K MG
Sbjct: 1 MASKQRENVFPTRMTLTTMKTRLKGAQTGHSLLKRKSEALKKRFREIVVNIEQAKQKMGR 60
Query: 61 VMKEAAFSLAEAKFTTGD-FNQVVLQNVTKAQIKIRTKKDNVAGVTLPVFE-SYQDGTDT 118
VM+ AAFS+AE F G+ N + Q+V + ++++R+K++N++GV LP FE + + D
Sbjct: 61 VMQIAAFSMAEVGFAMGNNINFEIQQSVKQPRLRVRSKQENISGVFLPTFEMNLDESIDD 120
Query: 119 YELAGLARGGQQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIP 178
++L GL +GGQQ+ K ++ Y+ A++ LV+LAS Q++FV L DV+++TNRRVN+IEH+IIP
Sbjct: 121 FQLTGLGKGGQQIQKARQVYEKAVETLVQLASYQSAFVLLGDVLQMTNRRVNSIEHIIIP 180
Query: 179 RIEKTLAYIISELDELEREEFYRLKKIQDKKK 210
R+E T+ YI SEL+ELERE+F RLKK+Q K+
Sbjct: 181 RLENTIKYIESELEELEREDFTRLKKVQKTKE 212
>sp|Q8TUS9|VATD_METKA V-type ATP synthase subunit D OS=Methanopyrus kandleri (strain AV19
/ DSM 6324 / JCM 9639 / NBRC 100938) GN=atpD PE=3 SV=1
Length = 232
Score = 114 bits (284), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 110/199 (55%)
Query: 9 IFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGEVMKEAAFS 68
+ P+R ++ R++ A+KGH LLK+K DAL M F ++ + E + + + EA
Sbjct: 9 VNPTRMELLKLQDRIELAKKGHKLLKEKRDALIMEFFEMVKRASEIREQAVKKLMEAYSK 68
Query: 69 LAEAKFTTGDFNQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGTDTYELAGLARGG 128
LA AK T G+ T +IK+ NV GV +P+ E + + + G A
Sbjct: 69 LAAAKVTVGEIGVERASMATGEEIKVDVGSRNVMGVVVPIIERVSEDGGSKVVYGFADTS 128
Query: 129 QQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIPRIEKTLAYII 188
L + + + AI ++ELA ++ + + + I+ T RRVNA+EH++IPR+E T YI
Sbjct: 129 GALDEAMRAFTEAIDAVLELAEIEETLRLMAEEIERTKRRVNALEHIVIPRLENTEKYIE 188
Query: 189 SELDELEREEFYRLKKIQD 207
+LDE ERE F RLK+++D
Sbjct: 189 MKLDEQERENFVRLKRVKD 207
>sp|B6YV16|VATD_THEON V-type ATP synthase subunit D OS=Thermococcus onnurineus (strain
NA1) GN=atpD PE=3 SV=1
Length = 212
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 119/214 (55%), Gaps = 6/214 (2%)
Query: 5 ERLPIFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGEVMKE 64
E L + P+R +K R+K A+KGH LLK K DAL M F I + + + +G M+E
Sbjct: 3 ELLNVKPTRMELLNLKRRIKLAKKGHKLLKDKQDALIMEFFTIYDEALSLREELGRKMEE 62
Query: 65 AAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRTKKDNVAGVTLPVFE--SYQDGTDTYELA 122
A +L A+ G + + ++ KK NV GV++P+ E S++ T A
Sbjct: 63 AFKALQMAEIDVGMLRLKEISLSVEPNKEVDIKKRNVMGVSVPLIEAESFRRSTSERGYA 122
Query: 123 GLARGGQQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIPRIEK 182
++ ++ + ++ + L V LA ++ + L I++T RRVNA+E++IIPR+E
Sbjct: 123 FVS-SSPRVDLAAEKFEEVLDLAVRLAEVEETLKRLAREIEVTKRRVNALEYIIIPRMEA 181
Query: 183 TLAYIISELDELEREEFYRLKKIQDKKKVIKAAS 216
T+ +I LDE+ERE F+RLK++ K +I+A S
Sbjct: 182 TVKFIKQRLDEMERENFFRLKRV---KALIEARS 212
>sp|A5UKB0|VATD_METS3 V-type ATP synthase subunit D OS=Methanobrevibacter smithii (strain
PS / ATCC 35061 / DSM 861) GN=atpD PE=3 SV=1
Length = 231
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 105/204 (51%), Gaps = 11/204 (5%)
Query: 9 IFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGEVMKEAAFS 68
I P+R +K+R K A KGH LLK+K DAL F IL ++ + +KEA +
Sbjct: 9 INPTRMELLSLKNRTKLAVKGHGLLKEKRDALIKEFFDILDRVKGVREAAERSLKEANEA 68
Query: 69 LAEAKFTTGDFNQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGTDTYELAGLARGG 128
L EA+ GD K I + K +V GV++PV E + + RG
Sbjct: 69 LLEAQIAMGDLAVRKASLSVKESIDVDIKSRSVMGVSVPV-----TNVKMEERSIIDRGY 123
Query: 129 Q------QLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIPRIEK 182
QL + K ++ +IK L+EL ++ + L + I+ T RRVNA+EH++IPR E
Sbjct: 124 SFSDTTIQLDEAAKKFEESIKFLIELGEVEKTIFLLAEEIEATKRRVNALEHIMIPRFEN 183
Query: 183 TLAYIISELDELEREEFYRLKKIQ 206
T YI L E+ERE F RLK I+
Sbjct: 184 TEKYIDMRLQEMERENFVRLKMIR 207
>sp|C6A5E6|VATD_THESM V-type ATP synthase subunit D OS=Thermococcus sibiricus (strain MM
739 / DSM 12597) GN=atpD PE=3 SV=1
Length = 214
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 112/203 (55%), Gaps = 5/203 (2%)
Query: 7 LPIFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGEVMKEA- 65
L + P+R +K R+K A+KGH +LK+K DAL M F I + + + + + + EA
Sbjct: 5 LKVKPTRMELLRLKRRIKLAEKGHKILKEKQDALIMEFFTIYDEALALRREVNQKIAEAF 64
Query: 66 -AFSLAEAKFTTGDFNQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGTDTYELA-G 123
LAE +++ L + +IKI K+ N+ GV +P+ E+ D YE
Sbjct: 65 EQLRLAEIDVGIVKLSEIALSVKSNKEIKI--KRRNIMGVPVPLIEAEGFRRDPYERGYA 122
Query: 124 LARGGQQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIPRIEKT 183
++ + ++ ++L+ LA ++ + L I+ T RRVNA+E++IIPR+ +T
Sbjct: 123 FVSTSPKVDVTAETFEEVLELVTRLAEIEETLKRLAKEIEKTKRRVNALEYIIIPRMAET 182
Query: 184 LAYIISELDELEREEFYRLKKIQ 206
+ YI LDE+ERE F+RLK+++
Sbjct: 183 VKYISQHLDEMERENFFRLKRVK 205
>sp|Q5JIR1|VATD_PYRKO V-type ATP synthase subunit D OS=Pyrococcus kodakaraensis (strain
ATCC BAA-918 / JCM 12380 / KOD1) GN=atpD PE=3 SV=1
Length = 214
Score = 102 bits (254), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 115/215 (53%), Gaps = 8/215 (3%)
Query: 5 ERLPIFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGEVMKE 64
E L + P+R +K R+ A+KGH LLK K DAL M F I + + + + E M E
Sbjct: 3 ELLNVKPTRMELLNLKRRITLAKKGHKLLKDKQDALVMEFFTIYDEALRLREELNEKMME 62
Query: 65 AAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRTKKDNVAGVTLPVFE--SYQDGTDTYELA 122
A +L A+ G + K ++ K NV GV +P+ E S++ A
Sbjct: 63 AFKALQRAEIDVGTLRMKEISLSVKPNREVEVKTRNVMGVPVPLIEAESFKRSAGERGYA 122
Query: 123 GLARGGQ-QLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIPRIE 181
++ + LA K ++ + L V LA ++ + L I++T RRVNA+E++IIPR+E
Sbjct: 123 FVSSSARVDLAAEK--FEEVLDLAVRLAEVEETLKRLAKEIEVTKRRVNALEYIIIPRME 180
Query: 182 KTLAYIISELDELEREEFYRLKKIQDKKKVIKAAS 216
T+ +I LDE+ERE F+RLK++ K +I+A S
Sbjct: 181 ATVKFIKQRLDEMERENFFRLKRV---KALIEARS 212
>sp|O06506|VATD_DESSY V-type ATP synthase subunit D OS=Desulfurococcus sp. (strain SY)
GN=atpD PE=3 SV=1
Length = 214
Score = 101 bits (252), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 112/205 (54%), Gaps = 5/205 (2%)
Query: 5 ERLPIFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGEVMKE 64
E L + P+R +K R++ A+KGH LLK K DAL M F I + ++ + + MKE
Sbjct: 3 ELLNVKPTRMELLNLKRRIQLAKKGHKLLKDKQDALVMEFFTIYDEALQLRRELNLKMKE 62
Query: 65 A--AFSLAEAKFTTGDFNQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGTDTYELA 122
A A +AE T ++ L +++IR K NV V +P+ E+ + E
Sbjct: 63 AFEALQMAEIDVGTLRLKEISLSVKPNREVEIR--KRNVMAVPVPLIEAESFKRNAGERG 120
Query: 123 -GLARGGQQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIPRIE 181
++ + + ++ + L V LA ++ + L I++T RRVNA+E++IIPR+E
Sbjct: 121 YAFVSSSAKVDLVAEKFEEVLDLAVRLAEVEETLKRLAREIEVTKRRVNALEYIIIPRME 180
Query: 182 KTLAYIISELDELEREEFYRLKKIQ 206
T+ +I LDE+ERE F+RLK+++
Sbjct: 181 ATVKFIKQRLDEMERENFFRLKRVK 205
>sp|O57731|VATD_PYRHO V-type ATP synthase subunit D OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=atpD PE=3 SV=1
Length = 214
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 109/213 (51%), Gaps = 25/213 (11%)
Query: 7 LPIFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGEVMKEAA 66
L I P+R +K R+K A++GH LLK+K DAL M F I + + + + M+EA
Sbjct: 5 LKIKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIRKMEEAF 64
Query: 67 FSLAEAKFTTGDFNQVVLQNVTKAQIKIRTKKDNVAGVTLPVFE-------------SYQ 113
SL A+ G + K +I K N+ GV +P+ E ++
Sbjct: 65 NSLRRAQVDVGALRLKEIAIGVKPNKEIEIKTRNIMGVRVPLIEVPELKRKASERGYAFV 124
Query: 114 DGTDTYELAGLARGGQQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIE 173
T T ++A + ++ ++L + LA ++ S L I+ T RRVNA+E
Sbjct: 125 STTSTVDMAA------------EKFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALE 172
Query: 174 HVIIPRIEKTLAYIISELDELEREEFYRLKKIQ 206
++IIPR+E T+ +I LDE+ERE F+RLK+++
Sbjct: 173 YIIIPRMENTIKFIEQHLDEMERENFFRLKRVK 205
>sp|Q58032|VATD_METJA V-type ATP synthase subunit D OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=atpD PE=3 SV=1
Length = 216
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 115/207 (55%), Gaps = 12/207 (5%)
Query: 9 IFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGEVMKEAAFS 68
+ P+R +K+++K A+KGH LLK+K DAL M F I+ + + + + + EA
Sbjct: 4 VNPTRMELLKLKNKIKLAEKGHKLLKQKRDALIMEFFQIIEQASDLRDKVEAKLAEAYKD 63
Query: 69 LAEAKFTTGDF---NQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESY----QDGTDTYEL 121
L A+ G + K ++ + TK N+ GVT+P FE Y + G Y
Sbjct: 64 LIMAQTVMGTLAVKEAALAAKNDKLEVDMDTK--NIMGVTVPTFEIYNVRRKVGERGYSP 121
Query: 122 AGLARGGQQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIPRIE 181
G++ +L + K ++ A++L+ ELA ++TS L + I T RRVNA+E+VIIPR++
Sbjct: 122 YGVS---SKLDEAAKKFEEALELITELAEIETSIKLLAEEIITTKRRVNALEYVIIPRLK 178
Query: 182 KTLAYIISELDELEREEFYRLKKIQDK 208
YI LDE+ERE F+RLK I+ +
Sbjct: 179 SLKKYISMRLDEMERENFFRLKLIKSR 205
>sp|Q9UXU9|VATD_PYRAB V-type ATP synthase subunit D OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=atpD PE=3 SV=1
Length = 214
Score = 97.4 bits (241), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 115/215 (53%), Gaps = 29/215 (13%)
Query: 7 LPIFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGEVMKEAA 66
L I P+R +K R+K A++GH LLK+K DAL M F I + + + + + M+EA
Sbjct: 5 LKIKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKMEEAF 64
Query: 67 FSLAEAKFTTGDFN--QVVLQNVTKAQIKIRTKKDNVAGVTLPVFE-------------S 111
+L A+ G ++ + +I+IRT+ N+ GV +P+ E +
Sbjct: 65 EALRRAQVDVGSLRLKEISIGVKPNEEIEIRTR--NIMGVRVPLIEVPELKRKASDRGYA 122
Query: 112 YQDGTDTYELAGLARGGQQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNA 171
+ T T ++A + ++ ++L + LA ++ S L I+ T RRVNA
Sbjct: 123 FISTTSTVDVAA------------EKFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNA 170
Query: 172 IEHVIIPRIEKTLAYIISELDELEREEFYRLKKIQ 206
+E++IIPR++ T+ +I LDE+ERE F+RLK+++
Sbjct: 171 LEYIIIPRMKNTIKFIEQHLDEMERENFFRLKRVK 205
>sp|A6UP56|VATD_METVS V-type ATP synthase subunit D OS=Methanococcus vannielii (strain SB
/ ATCC 35089 / DSM 1224) GN=atpD PE=3 SV=1
Length = 214
Score = 97.1 bits (240), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/221 (35%), Positives = 117/221 (52%), Gaps = 44/221 (19%)
Query: 9 IFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSK------------------ 50
+ P+R +KS++K A+KGH LLK+K DAL M F IL++
Sbjct: 4 VNPTRMELLKLKSKIKLAEKGHKLLKQKRDALMMEFFEILNQASGIRDKVNVALSKAYKD 63
Query: 51 IIETKTLMGEV-MKEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRTKKDNVAGVTLPVF 109
+I + LMG + +KEA+F+ AK T I++ N+ G+ +PVF
Sbjct: 64 LIMAQALMGTLSVKEASFA---AKNDT---------------IELDVDMRNIMGIGVPVF 105
Query: 110 ESYQDGTDT----YELAGLARGGQQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKIT 165
E D Y G++ +L + KN++ A++L+ ELA ++TS L I T
Sbjct: 106 ELQNVKRDISNRGYSPYGVS---SKLDEAAKNFEEALELISELAEIETSIKLLAQEIITT 162
Query: 166 NRRVNAIEHVIIPRIEKTLAYIISELDELEREEFYRLKKIQ 206
RRVNA+E+V+IPR+ +T YI LDE+ERE F+RLK I+
Sbjct: 163 KRRVNALEYVVIPRMNETKKYIGMRLDEMERENFFRLKLIK 203
>sp|C5A338|VATD_THEGJ V-type ATP synthase subunit D OS=Thermococcus gammatolerans (strain
DSM 15229 / JCM 11827 / EJ3) GN=atpD PE=3 SV=1
Length = 214
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 115/218 (52%), Gaps = 14/218 (6%)
Query: 5 ERLPIFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGEVMKE 64
E L + P+R +K R++ A+KGH LLK K DAL M F I + ++ + + E M
Sbjct: 3 ELLNVKPTRMELLNLKRRIQLAKKGHKLLKDKQDALIMEFFTIYDEALQLRRELNEKMGV 62
Query: 65 AAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGTDTYELAGL 124
A +L A+ G K ++ K+ NV GV++P+ E+ + ++
Sbjct: 63 AFETLTRAQIEAGTLPLREAALAVKPNKEVEIKRRNVMGVSVPLIEA-----EGFKRKAS 117
Query: 125 ARGGQQLAK------LKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIP 178
RG ++ + ++ + L V LA ++ + L I+ T RRVNA+E++IIP
Sbjct: 118 ERGYAFVSTSPFVDIAAEKFEEVLDLAVRLAEVEETLKRLAREIETTKRRVNALEYIIIP 177
Query: 179 RIEKTLAYIISELDELEREEFYRLKKIQDKKKVIKAAS 216
R+E T+ +I LDE+ERE F+RLK++ K +I+A S
Sbjct: 178 RMEATVKFIKQRLDEMERENFFRLKRV---KALIEARS 212
>sp|A6UT37|VATD_META3 V-type ATP synthase subunit D OS=Methanococcus aeolicus (strain
Nankai-3 / ATCC BAA-1280) GN=atpD PE=3 SV=1
Length = 212
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 114/204 (55%), Gaps = 10/204 (4%)
Query: 9 IFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGEVMKEAAFS 68
I P+R +K+++K AQKGH LLK+K DAL M F IL + + + +++A
Sbjct: 4 INPTRMELLKLKTKIKLAQKGHKLLKQKRDALIMEFFEILDQASGIRDKVNNALEKAYKD 63
Query: 69 LAEAKFTTGDFNQVVLQNVTKA----QIKIRTKKDNVAGVTLPVFESYQDGTDTYELAGL 124
L A+ G + +Q ++ A I + N+ GVT+PV E ++ T G
Sbjct: 64 LIMAQAVMGTLS---VQEISYASKNDNIVLDLDTRNIMGVTVPVLE-IENVKRTMADRGY 119
Query: 125 ARGG--QQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIPRIEK 182
G +L + K ++ A++L++ELA ++TS L + I T RRVNA+E+V+IPR+ +
Sbjct: 120 GPYGVSSKLDEAAKEFEEALELIMELAEIETSIKLLAEEIITTKRRVNALEYVVIPRMAE 179
Query: 183 TLAYIISELDELEREEFYRLKKIQ 206
YI LDE+ERE F+RLK I+
Sbjct: 180 MQKYIGMRLDEMERENFFRLKLIK 203
>sp|Q6LYE5|VATD_METMP V-type ATP synthase subunit D OS=Methanococcus maripaludis (strain
S2 / LL) GN=atpD PE=3 SV=1
Length = 214
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 109/203 (53%), Gaps = 8/203 (3%)
Query: 9 IFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGEVMKEAAFS 68
+ P+R +K ++K A+KGH LLK+K DAL M F IL + + + + + +A
Sbjct: 4 VNPTRMELLKLKGKIKLAEKGHKLLKQKRDALMMEFFEILDQASGIRDKVNDALSQAYKD 63
Query: 69 LAEAKFTTGDFNQVVLQNVTKAQ-IKIRTKKDNVAGVTLPVFESYQDGTDT----YELAG 123
L A+ G + K I + N+ G+ +PVFE D Y G
Sbjct: 64 LIMAQAVMGTLSVKEASFAAKNNDIDLDVDMRNIMGIDVPVFEISNVKRDISTRGYSPYG 123
Query: 124 LARGGQQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIPRIEKT 183
++ +L + KN++ A++L+ ELA ++TS L I T RRVNA+E+V+IP++ +T
Sbjct: 124 VS---SKLDEAAKNFEEALELITELAEIETSIKLLAQEIITTKRRVNALEYVVIPKMNET 180
Query: 184 LAYIISELDELEREEFYRLKKIQ 206
YI L+E+ERE F+RLK I+
Sbjct: 181 KKYIAMRLEEMERENFFRLKIIK 203
>sp|A4FXD2|VATD_METM5 V-type ATP synthase subunit D OS=Methanococcus maripaludis (strain
C5 / ATCC BAA-1333) GN=atpD PE=3 SV=1
Length = 211
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 106/200 (53%), Gaps = 2/200 (1%)
Query: 9 IFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGEVMKEAAFS 68
+ P+R +K ++K A+KGH LLK+K DAL M F IL + + + + + +A
Sbjct: 4 VNPTRMELLKLKGKIKLAEKGHKLLKQKRDALMMEFFEILDQASGIRDKVNDALSQAYKD 63
Query: 69 LAEAKFTTGDFNQVVLQNVTKAQ-IKIRTKKDNVAGVTLPVFESYQDGTDTYELAGLARG 127
L A+ G + K I + N+ G+ +PVFE D G
Sbjct: 64 LIMAQAVMGTLSVKEASFAAKNNNIDLDVDMRNIMGIDVPVFEISNVKRDISNRGYSPYG 123
Query: 128 -GQQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIPRIEKTLAY 186
+L + KN++ A++L+ ELA ++TS L I T RRVNA+E+V+IP++ +T Y
Sbjct: 124 VSSKLDEAAKNFEEALELIAELAEIETSIKLLAQEIITTKRRVNALEYVVIPKMNETKKY 183
Query: 187 IISELDELEREEFYRLKKIQ 206
I L+E+ERE F+RLK I+
Sbjct: 184 IAMRLEEMERENFFRLKIIK 203
>sp|A6VFZ4|VATD_METM7 V-type ATP synthase subunit D OS=Methanococcus maripaludis (strain
C7 / ATCC BAA-1331) GN=atpD PE=3 SV=1
Length = 214
Score = 95.5 bits (236), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 105/200 (52%), Gaps = 2/200 (1%)
Query: 9 IFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGEVMKEAAFS 68
+ P+R +K ++K A+KGH LLK+K DAL M F IL + + + + + +A
Sbjct: 4 VNPTRMELLKLKGKIKLAEKGHKLLKQKRDALMMEFFEILDQASGIRDKVNDALSQAYKD 63
Query: 69 LAEAKFTTGDFNQVVLQNVTKA-QIKIRTKKDNVAGVTLPVFESYQDGTDTYELAGLARG 127
L A+ G + K I + N+ G+ +PVFE D G
Sbjct: 64 LIMAQAVMGTLSVKEASFAAKNDNIDLDVDMRNIMGIDVPVFEISNVKRDISNRGYSPYG 123
Query: 128 -GQQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIPRIEKTLAY 186
+L + KN++ A++L+ ELA ++TS L I T RRVNA+E+V+IP++ T Y
Sbjct: 124 VSSKLDEAAKNFEEALELITELAEIETSIKLLAQEIITTKRRVNALEYVVIPKMNATKKY 183
Query: 187 IISELDELEREEFYRLKKIQ 206
I L+E+ERE F+RLK I+
Sbjct: 184 IAMRLEEMERENFFRLKIIK 203
>sp|A9AAQ2|VATD_METM6 V-type ATP synthase subunit D OS=Methanococcus maripaludis (strain
C6 / ATCC BAA-1332) GN=atpD PE=3 SV=1
Length = 214
Score = 95.1 bits (235), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 105/200 (52%), Gaps = 2/200 (1%)
Query: 9 IFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGEVMKEAAFS 68
+ P+R +K ++K A+KGH LLK+K DAL M F IL + + + + + +A
Sbjct: 4 VNPTRMELLKLKGKIKLAEKGHKLLKQKRDALMMEFFEILDQASGIRDKVNDAISQAYKD 63
Query: 69 LAEAKFTTGDFNQVVLQNVTKA-QIKIRTKKDNVAGVTLPVFESYQDGTDTYELAGLARG 127
L A+ G + K I + N+ G+ +PVFE D G
Sbjct: 64 LIMAQAVMGTLSVKEASFAAKNDNIDLDVDMRNIMGIDVPVFEISNVKRDISNRGYSPYG 123
Query: 128 -GQQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIPRIEKTLAY 186
+L + KN++ A++L+ ELA ++TS L I T RRVNA+E+V+IP++ T Y
Sbjct: 124 VSSKLDEAAKNFEEALELITELAEIETSIKLLAQEIITTKRRVNALEYVVIPKMNATKKY 183
Query: 187 IISELDELEREEFYRLKKIQ 206
I L+E+ERE F+RLK I+
Sbjct: 184 IAMRLEEMERENFFRLKIIK 203
>sp|B0K5I8|VATD_THEPX V-type ATP synthase subunit D OS=Thermoanaerobacter sp. (strain
X514) GN=atpD PE=3 SV=1
Length = 209
Score = 94.4 bits (233), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 109/204 (53%), Gaps = 10/204 (4%)
Query: 9 IFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGEVMKE---- 64
+ P+R + +K RL A++GH LLK K D L +F L + + + L EV E
Sbjct: 6 VNPTRMELTSLKKRLVTAKRGHKLLKDKQDELVKKF---LDMVKQNRALREEVEAELIGA 62
Query: 65 -AAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGTDTYELAG 123
+F++A ++ + + ++ + A++ I KK+N+ V +P E Q+ + G
Sbjct: 63 FKSFTMARSQMSANVVEESLM--IPSAKVSINVKKENIMSVNVPKLEILQEESKNLYPYG 120
Query: 124 LARGGQQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIPRIEKT 183
A ++ + T + +++LA L+ + + D I+ T RRVNA+E+V+IP++E T
Sbjct: 121 FANTSAEMDAAIRTLATMLPKMLKLAELEKACQLMADEIEKTRRRVNALEYVLIPQLENT 180
Query: 184 LAYIISELDELEREEFYRLKKIQD 207
+ YI +LDE ER RL KI++
Sbjct: 181 IKYITMKLDENERSSRTRLMKIKE 204
>sp|B0K8E6|VATD_THEP3 V-type ATP synthase subunit D OS=Thermoanaerobacter
pseudethanolicus (strain ATCC 33223 / 39E) GN=atpD PE=3
SV=1
Length = 209
Score = 94.4 bits (233), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 109/204 (53%), Gaps = 10/204 (4%)
Query: 9 IFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGEVMKE---- 64
+ P+R + +K RL A++GH LLK K D L +F L + + + L EV E
Sbjct: 6 VNPTRMELTSLKKRLVTAKRGHKLLKDKQDELVKKF---LDMVKQNRALREEVEAELIGA 62
Query: 65 -AAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGTDTYELAG 123
+F++A ++ + + ++ + A++ I KK+N+ V +P E Q+ + G
Sbjct: 63 FKSFTMARSQMSANVVEESLM--IPSAKVSINVKKENIMSVNVPKLEILQEESKNLYPYG 120
Query: 124 LARGGQQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIPRIEKT 183
A ++ + T + +++LA L+ + + D I+ T RRVNA+E+V+IP++E T
Sbjct: 121 FANTSAEMDAAIRTLATMLPKMLKLAELEKACQLMADEIEKTRRRVNALEYVLIPQLENT 180
Query: 184 LAYIISELDELEREEFYRLKKIQD 207
+ YI +LDE ER RL KI++
Sbjct: 181 IKYITMKLDENERSSRTRLMKIKE 204
>sp|Q8U4A4|VATD_PYRFU V-type ATP synthase subunit D OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=atpD PE=3 SV=1
Length = 214
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 112/205 (54%), Gaps = 5/205 (2%)
Query: 5 ERLPIFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGEVMKE 64
E L + P+R +K R+K A++GH LLK+K DAL M F I + + + + + + E
Sbjct: 3 EILKVKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSMRRELIKKIGE 62
Query: 65 A--AFSLAEAKFTTGDFNQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGTDTYELA 122
A A LA+ + + ++ + +I++R++ N+ GV +P+ E + E
Sbjct: 63 AFEALRLAQVEVGSVRLKEIAIGVNPNKEIEVRSR--NIMGVRVPLIEVPELKRKPSERG 120
Query: 123 -GLARGGQQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIPRIE 181
+ + ++ ++L + LA ++ S L I+ T RRVNA+E++IIPR++
Sbjct: 121 YAFISTSSAVDVAAEKFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIPRMK 180
Query: 182 KTLAYIISELDELEREEFYRLKKIQ 206
T+ +I LDE+ERE F+RLK+I+
Sbjct: 181 NTIKFIEQHLDEMERENFFRLKRIK 205
>sp|O27034|VATD_METTH V-type ATP synthase subunit D OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=atpD PE=3 SV=1
Length = 213
Score = 88.2 bits (217), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 109/199 (54%), Gaps = 1/199 (0%)
Query: 9 IFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGEVMKEAAFS 68
I P+R +K R K A KG+SLLK+K +AL M F IL ++ ++ + E +KEA
Sbjct: 9 INPTRMELLKLKQREKLAVKGYSLLKEKRNALIMEFFNILERVKGSREKVEEHLKEAFSD 68
Query: 69 LAEAKFTTGDFNQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGTDTYELA-GLARG 127
L EA+ GD + +++ ++ GV +PV ++ E GL
Sbjct: 69 LTEAQVLMGDTAVERAAMSVRESVEVDIDSRSIMGVVVPVVDARATQRTVVERGYGLVDT 128
Query: 128 GQQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIPRIEKTLAYI 187
+L + + ++ ++ L++EL ++ + L I+ T RRVNA+EH+IIPR++ T+ YI
Sbjct: 129 SVKLDEAARKFEESLALIIELGEIEKTIRLLAGEIESTKRRVNALEHIIIPRLKNTVKYI 188
Query: 188 ISELDELEREEFYRLKKIQ 206
L+E+ERE F RLK I+
Sbjct: 189 EMRLEEMERENFVRLKMIK 207
>sp|Q2NF89|VATD_METST V-type ATP synthase subunit D OS=Methanosphaera stadtmanae (strain
DSM 3091) GN=atpD PE=3 SV=1
Length = 214
Score = 88.2 bits (217), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 110/202 (54%), Gaps = 7/202 (3%)
Query: 9 IFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGEVMKEAAFS 68
I P+R +K R K + KGHSLLK+K DAL F IL ++ ++ EV K+ A +
Sbjct: 9 INPTRNELLNLKDRAKLSIKGHSLLKEKRDALIKEFFEILDRVQGSRD---EVEKKLAIA 65
Query: 69 LAE---AKFTTGDFNQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGTDTYELA-GL 124
+E A+ GD + I++ ++ GV++PV +S D G
Sbjct: 66 YSELNKAQIDMGDMAVKRAALSVRESIELDISSRSIMGVSVPVVKSRATHNDVLSRGYGF 125
Query: 125 ARGGQQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIPRIEKTL 184
A L K ++ +IK+++EL ++ + + L ++ T RRVNA+EHVIIPRI+ T+
Sbjct: 126 AGTSANLDVAAKEFEESIKIIIELGEIEKTIIMLAREVEATKRRVNALEHVIIPRIKNTI 185
Query: 185 AYIISELDELEREEFYRLKKIQ 206
++I L+E+ERE F +LK I+
Sbjct: 186 SFIEMRLEEMERESFAQLKVIK 207
>sp|A3DHP2|VATD_CLOTH V-type ATP synthase subunit D OS=Clostridium thermocellum (strain
ATCC 27405 / DSM 1237) GN=atpD PE=3 SV=1
Length = 222
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 106/204 (51%), Gaps = 8/204 (3%)
Query: 9 IFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGEVMKEAA-- 66
+ P+R + +K RL+ A++GH LLK K D L +F ++ K E + + E++ +A
Sbjct: 6 VNPTRMELTRLKKRLQVARRGHKLLKDKLDELMKQFLDLVRKNKELREKVEEMLMKAHQD 65
Query: 67 FSLAEAKFTTGDFNQVVLQNVTKAQIKIRTKKDNVAGVTLPVFE---SYQDGTDTYELAG 123
F +A A ++ ++ + K I + N+ V +PV + S D +D Y G
Sbjct: 66 FLIARAVMSSEGLEAALM--LPKQSISLDVSTQNIMSVEVPVLKFTTSSSDESDIYPY-G 122
Query: 124 LARGGQQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIPRIEKT 183
A +L + ++ELA ++ S L I+ T RRVNA+E+V+IP++ +T
Sbjct: 123 FASTSGELDGAILTLSKVLPYMLELAQMEKSSQLLAQEIEKTRRRVNALEYVMIPQLTET 182
Query: 184 LAYIISELDELEREEFYRLKKIQD 207
+ YI +LDE ER RL K++D
Sbjct: 183 IKYISMKLDENERGNITRLMKVKD 206
>sp|C1FTN5|VATD_CLOBJ V-type ATP synthase subunit D OS=Clostridium botulinum (strain
Kyoto / Type A2) GN=atpD PE=3 SV=1
Length = 216
Score = 80.9 bits (198), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 6 RLPIFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGEVMKEA 65
+L + P+R + +K RL A +GH LLK K D L RF + I + L +V KE
Sbjct: 2 KLNVNPTRMELTKLKKRLTTATRGHKLLKDKQDELMRRF---IGMIKKNNELRKDVEKEL 58
Query: 66 AFSLAEAKFTTGDFNQVVLQNVT---KAQIKIRTKKDNVAGVTLPVFE---SYQDGTDTY 119
S + + + L+ K I + KK N+ V +PVF+ + +
Sbjct: 59 EGSFKDFLMASAVMSPEFLEEAVAYPKESISVDVKKQNIMSVNVPVFDFKRKLEGDKGSI 118
Query: 120 ELAGLARGGQQL-AKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIP 178
G A +L ++K Y KLL ELA ++ + + D I+ T RRVNA+E++ IP
Sbjct: 119 FPYGFANTSAELDGAIEKLYGILPKLL-ELAKVEKACQLMADEIEKTRRRVNALEYMTIP 177
Query: 179 RIEKTLAYIISELDELEREEFYRLKKIQ 206
++E+T+ +I +LDE ER RL KI+
Sbjct: 178 QLEETIKFIQMKLDENERSTVTRLMKIK 205
>sp|A7FWQ5|VATD_CLOB1 V-type ATP synthase subunit D OS=Clostridium botulinum (strain ATCC
19397 / Type A) GN=atpD PE=3 SV=1
Length = 216
Score = 80.9 bits (198), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 6 RLPIFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGEVMKEA 65
+L + P+R + +K RL A +GH LLK K D L RF + I + L +V KE
Sbjct: 2 KLNVNPTRMELTKLKKRLTTATRGHKLLKDKQDELMRRF---IGMIKKNNELRKDVEKEL 58
Query: 66 AFSLAEAKFTTGDFNQVVLQNVT---KAQIKIRTKKDNVAGVTLPVFE---SYQDGTDTY 119
S + + + L+ K I + KK N+ V +PVF+ + +
Sbjct: 59 EGSFKDFLMASAVMSPEFLEEAVAYPKESISVDVKKQNIMSVNVPVFDFKRKLEGDKGSI 118
Query: 120 ELAGLARGGQQL-AKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIP 178
G A +L ++K Y KLL ELA ++ + + D I+ T RRVNA+E++ IP
Sbjct: 119 FPYGFANTSAELDGAIEKLYGILPKLL-ELAKVEKACQLMADEIEKTRRRVNALEYMTIP 177
Query: 179 RIEKTLAYIISELDELEREEFYRLKKIQ 206
++E+T+ +I +LDE ER RL KI+
Sbjct: 178 QLEETIKFIQMKLDENERSTVTRLMKIK 205
>sp|B1KXT4|VATD_CLOBM V-type ATP synthase subunit D OS=Clostridium botulinum (strain Loch
Maree / Type A3) GN=atpD PE=3 SV=1
Length = 216
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 6 RLPIFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGEVMKEA 65
+L + P+R + +K RL A +GH LLK K D L RF + I + L +V KE
Sbjct: 2 KLNVNPTRMELTKLKKRLTTATRGHKLLKDKQDELMRRF---IGMIKKNNELRKDVEKEL 58
Query: 66 AFSLAEAKFTTGDFNQVVLQNVT---KAQIKIRTKKDNVAGVTLPVFE---SYQDGTDTY 119
S + + + L+ K I + KK N+ V +PVF+ + +
Sbjct: 59 EGSFKDFLMASAVMSPEFLEEAVAYPKESISVDVKKQNIMSVNVPVFDFKRKLEGDKGSI 118
Query: 120 ELAGLARGGQQL-AKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIP 178
G A +L ++K Y KLL ELA ++ + + D I+ T RRVNA+E++ IP
Sbjct: 119 FPYGFANTSAELDGAIEKLYGILPKLL-ELAKVEKACQLMADEIEKTRRRVNALEYMTIP 177
Query: 179 RIEKTLAYIISELDELEREEFYRLKKIQ 206
++E+T+ +I +LDE ER RL KI+
Sbjct: 178 QLEETIRFIQMKLDENERSTVTRLMKIK 205
>sp|A7GGL2|VATD_CLOBL V-type ATP synthase subunit D OS=Clostridium botulinum (strain
Langeland / NCTC 10281 / Type F) GN=atpD PE=3 SV=1
Length = 216
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 6 RLPIFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGEVMKEA 65
+L + P+R + +K RL A +GH LLK K D L RF + I + L +V KE
Sbjct: 2 KLNVNPTRMELTKLKKRLTTATRGHKLLKDKQDELMRRF---IGMIKKNNELRKDVEKEL 58
Query: 66 AFSLAEAKFTTGDFNQVVLQNVT---KAQIKIRTKKDNVAGVTLPVFE---SYQDGTDTY 119
S + + + L+ K I + KK N+ V +PVF+ + +
Sbjct: 59 EGSFKDFLMASAVMSPEFLEEAVAYPKESISVDVKKQNIMSVNVPVFDFKRKLEGDKGSI 118
Query: 120 ELAGLARGGQQL-AKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIP 178
G A +L ++K Y KLL ELA ++ + + D I+ T RRVNA+E++ IP
Sbjct: 119 FPYGFANTSAELDGAIEKLYGILPKLL-ELAKVEKACQLMADEIEKTRRRVNALEYMTIP 177
Query: 179 RIEKTLAYIISELDELEREEFYRLKKIQ 206
++E+T+ +I +LDE ER RL KI+
Sbjct: 178 QLEETIRFIQMKLDENERSTVTRLMKIK 205
>sp|B1IJM6|VATD_CLOBK V-type ATP synthase subunit D OS=Clostridium botulinum (strain Okra
/ Type B1) GN=atpD PE=3 SV=1
Length = 216
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 6 RLPIFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGEVMKEA 65
+L + P+R + +K RL A +GH LLK K D L RF + I + L +V KE
Sbjct: 2 KLNVNPTRMELTKLKKRLTTATRGHKLLKDKQDELMRRF---IGMIKKNNELRKDVEKEL 58
Query: 66 AFSLAEAKFTTGDFNQVVLQNVT---KAQIKIRTKKDNVAGVTLPVFE---SYQDGTDTY 119
S + + + L+ K I + KK N+ V +PVF+ + +
Sbjct: 59 EGSFKDFLMASAVMSPEFLEEAVAYPKESISVDVKKQNIMSVNVPVFDFKRKLEGDKGSI 118
Query: 120 ELAGLARGGQQL-AKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIP 178
G A +L ++K Y KLL ELA ++ + + D I+ T RRVNA+E++ IP
Sbjct: 119 FPYGFANTSAELDGAIEKLYGILPKLL-ELAKVEKACQLMADEIEKTRRRVNALEYMTIP 177
Query: 179 RIEKTLAYIISELDELEREEFYRLKKIQ 206
++E+T+ +I +LDE ER RL KI+
Sbjct: 178 QLEETIRFIQMKLDENERSTVTRLMKIK 205
>sp|C3L1A9|VATD_CLOB6 V-type ATP synthase subunit D OS=Clostridium botulinum (strain 657
/ Type Ba4) GN=atpD PE=3 SV=1
Length = 216
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 6 RLPIFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGEVMKEA 65
+L + P+R + +K RL A +GH LLK K D L RF + I + L +V KE
Sbjct: 2 KLNVNPTRMELTKLKKRLTTATRGHKLLKDKQDELMRRF---IGMIKKNNELRKDVEKEL 58
Query: 66 AFSLAEAKFTTGDFNQVVLQNVT---KAQIKIRTKKDNVAGVTLPVFE---SYQDGTDTY 119
S + + + L+ K I + KK N+ V +PVF+ + +
Sbjct: 59 EGSFKDFLMASAVMSPEFLEEAVAYPKESISVDVKKQNIMSVNVPVFDFKRKLEGDKGSI 118
Query: 120 ELAGLARGGQQL-AKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIP 178
G A +L ++K Y KLL ELA ++ + + D I+ T RRVNA+E++ IP
Sbjct: 119 FPYGFANTSAELDGAIEKLYGILPKLL-ELAKVEKACQLMADEIEKTRRRVNALEYMTIP 177
Query: 179 RIEKTLAYIISELDELEREEFYRLKKIQ 206
++E+T+ +I +LDE ER RL KI+
Sbjct: 178 QLEETIRFIQMKLDENERSTVTRLMKIK 205
>sp|A7IAU6|VATD_METB6 V-type ATP synthase subunit D OS=Methanoregula boonei (strain 6A8)
GN=atpD PE=3 SV=1
Length = 209
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 102/202 (50%), Gaps = 7/202 (3%)
Query: 9 IFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGEVM---KEA 65
I P+R +K +++ +Q+G+ +LK K D L M F ILS E K GE++ K A
Sbjct: 6 IKPTRSELINLKRKIQLSQRGYKILKMKRDGLIMEFFKILS---EAKDSRGELLRRYKHA 62
Query: 66 AFSLAEAKFTTGDFNQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGTDTYELA-GL 124
+A A G K +I K N+ GV +P ES + + G+
Sbjct: 63 VEMMAVANTVEGALGVKAAAFSVKETPEITLKSKNIMGVVVPEIESSKVKKTLADRGYGV 122
Query: 125 ARGGQQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIPRIEKTL 184
+ + +++ ++ ++E A ++T+ L D I+ T RRVNA+E +IP + +
Sbjct: 123 LGTSPVIDETASSFEDLVEAIIESAEIETTMKRLLDEIEKTKRRVNALEFKVIPELTEAR 182
Query: 185 AYIISELDELEREEFYRLKKIQ 206
+I LDE+EREE +R+KKI+
Sbjct: 183 DFIKMRLDEMEREELFRMKKIK 204
>sp|Q834X7|VATD_ENTFA V-type ATP synthase subunit D OS=Enterococcus faecalis (strain ATCC
700802 / V583) GN=atpD PE=3 SV=1
Length = 211
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 107/213 (50%), Gaps = 14/213 (6%)
Query: 6 RLPIFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGEVMKEA 65
RL + P+R S +K +L A +GH LLK K D L RF ++ + E L +V +E
Sbjct: 3 RLNVNPTRMELSRLKKQLTTATRGHKLLKDKQDELMRRF---IALVKENNELRIQVEQEV 59
Query: 66 AFSLAEAKFTTGDFNQVVLQN---VTKAQIKIRTKKDNVAGVTLP--VF---ESYQDGTD 117
+L+ N+ ++ + ++++ + N+ V +P +F ES Q+
Sbjct: 60 TDALSNFVLANATLNEAFIEELVAIPAEKVELEIIEQNILSVPVPKMIFDYDESVQEAPL 119
Query: 118 TYELAGLARGGQQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVII 177
Y G +L + + + L+ LA+++ + L I+ T RRVNA+E++ I
Sbjct: 120 DY---GYVNSNSELDQAFAKISSILPKLLALANVEKTCQLLSKEIEKTRRRVNALEYMTI 176
Query: 178 PRIEKTLAYIISELDELEREEFYRLKKIQDKKK 210
P++E+T+ YI +L+E ER E RL KI+ K
Sbjct: 177 PQLEETIYYIQMKLEENERGEITRLIKIKSMNK 209
>sp|Q8RI80|VATD_FUSNN V-type ATP synthase subunit D OS=Fusobacterium nucleatum subsp.
nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 /
LMG 13131) GN=atpD PE=3 SV=1
Length = 211
Score = 78.2 bits (191), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 102/208 (49%), Gaps = 13/208 (6%)
Query: 6 RLPIFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGEVMKEA 65
+L + P+R A S +K RL A++GH LLK K D L +F ++ I E K L EV KE
Sbjct: 3 KLKVNPTRMALSELKKRLVTARRGHKLLKDKQDELMRQF---INLIKENKKLRVEVEKEL 59
Query: 66 AFSLAEAKFTTGDFNQVVLQNV---TKAQIKIRTKKDNVAGVTLP----VFESYQDGTDT 118
+ S + + + L++ K +I + K N+ V +P V E +
Sbjct: 60 SDSFKSFLLASATMSPLFLESAISFPKEKIAVEMKLKNIMSVNVPEMKFVKEEMEGSIFP 119
Query: 119 YELAGLARGGQQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIP 178
Y G + +L Q + L+ LA ++ S + D I+ T RRVNA+E+ IP
Sbjct: 120 Y---GFVQTSAELDDTVIKLQKVLDNLLSLAEIEKSCQLMADEIEKTRRRVNALEYSTIP 176
Query: 179 RIEKTLAYIISELDELEREEFYRLKKIQ 206
+E+T+ I +LDE ER RL K++
Sbjct: 177 NLEETVKDIRMKLDENERATITRLMKVK 204
>sp|Q184E4|VATD_CLOD6 V-type ATP synthase subunit D OS=Clostridium difficile (strain 630)
GN=atpD PE=3 SV=1
Length = 222
Score = 77.4 bits (189), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 103/209 (49%), Gaps = 13/209 (6%)
Query: 6 RLPIFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGEVMKEA 65
RL I P+R + +K LK A +GH LLK K D L +F L + E K L E E
Sbjct: 3 RLNINPTRMEMTRLKKLLKTATRGHKLLKDKLDELMKQF---LEIVRENKRLREEA--EN 57
Query: 66 AFSLAEAKFTTGD--FNQVVLQN---VTKAQIKIRTKKDNVAGVTLPVFE--SYQDGTDT 118
A A F +Q L + + K + + N+ V +PVF+ + + +D
Sbjct: 58 ALDTAYKNFIIARAVMSQEYLGSALMMPKQSVSVDVSTRNIMSVDVPVFDFKTENNQSDI 117
Query: 119 YELAGLARGGQQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIP 178
Y GLA +L + + A++ L+ LA + S L I+ T RRVNA+E+V+IP
Sbjct: 118 YPY-GLAFTSGELDSAMEAFSDAMQPLLRLAESEKSAQLLAQEIEKTRRRVNALENVMIP 176
Query: 179 RIEKTLAYIISELDELEREEFYRLKKIQD 207
+T+ YI +L+E ER RL K++D
Sbjct: 177 NYIETIKYIAMKLEENERASTTRLMKVKD 205
>sp|B2IP45|VATD_STRPS V-type ATP synthase subunit D OS=Streptococcus pneumoniae (strain
CGSP14) GN=atpD PE=3 SV=1
Length = 203
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 105/205 (51%), Gaps = 8/205 (3%)
Query: 6 RLPIFPSRGAQSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGEV---M 62
RL + P+R + +K RLK A++GH LLK K D L RF +S I E L EV +
Sbjct: 3 RLNVKPTRMELNNLKERLKTAERGHKLLKDKRDELMRRF---ISLIRENNRLRKEVESYL 59
Query: 63 KEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRTKKDNVAGVTLP-VFESYQDGTDTYEL 121
+ S A AK L ++ +I++ +K+N+ VT+P + + + E
Sbjct: 60 IDNLKSFAVAKSLKNSLMVEELFSIPSKEIELFIEKENIMSVTVPRMHMNITSQNENSEY 119
Query: 122 AGLARGGQQLAKLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNAIEHVIIPRIE 181
+ L+ ++ + + I L+ LA ++ + + D I+ T RRVN +E+ IIP +
Sbjct: 120 SYLS-SNSEMDDVFATMNSLIDKLLRLAEVEKTCQLMADEIEKTRRRVNGLEYSIIPNLS 178
Query: 182 KTLAYIISELDELEREEFYRLKKIQ 206
+T+ YI +L+E ER R+ K++
Sbjct: 179 ETIHYIELKLEEAERANLVRIMKVK 203
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.346
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,408,828
Number of Sequences: 539616
Number of extensions: 2855189
Number of successful extensions: 13196
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 88
Number of HSP's that attempted gapping in prelim test: 12949
Number of HSP's gapped (non-prelim): 244
length of query: 243
length of database: 191,569,459
effective HSP length: 114
effective length of query: 129
effective length of database: 130,053,235
effective search space: 16776867315
effective search space used: 16776867315
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)