Query psy12149
Match_columns 243
No_of_seqs 105 out of 624
Neff 6.5
Searched_HMMs 13730
Date Fri Aug 16 19:59:29 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12149.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/12149hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1unda_ a.14.1.1 (A:) Advillin 20.7 17 0.0012 20.5 1.1 20 194-213 13-32 (36)
2 d1es6a2 b.31.1.1 (A:201-321) E 17.8 12 0.00091 25.9 0.0 15 98-112 55-69 (121)
3 d1r7ja_ a.4.5.49 (A:) Sso10a ( 13.6 1.6E+02 0.012 19.2 5.2 35 23-62 55-89 (90)
4 d1yu8x1 a.14.1.1 (X:42-76) Vil 13.3 23 0.0017 19.8 0.4 19 194-212 12-30 (35)
5 d2etda1 a.29.9.1 (A:35-183) Hy 12.6 2.2E+02 0.016 19.8 6.8 54 16-69 1-54 (149)
6 d1qzpa_ a.14.1.1 (A:) Dematin 11.9 36 0.0026 21.8 1.1 20 194-213 45-64 (68)
7 d1twfc1 d.74.3.1 (C:3-41,C:173 8.5 1.7E+02 0.012 20.8 3.9 23 24-46 109-131 (135)
8 d1yu5x1 a.14.1.1 (X:10-76) Vil 7.2 45 0.0032 21.2 0.0 19 194-212 44-62 (67)
9 d1wfda_ a.7.14.1 (A:) Hypothet 6.9 2.2E+02 0.016 18.3 3.8 15 129-143 10-24 (93)
10 d1qvra2 c.37.1.20 (A:149-535) 6.8 4.6E+02 0.034 21.1 6.7 55 133-187 300-359 (387)
No 1
>d1unda_ a.14.1.1 (A:) Advillin {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.68 E-value=17 Score=20.54 Aligned_cols=20 Identities=15% Similarity=0.182 Sum_probs=16.6
Q ss_pred hHHHHHHHHHHHHhhHHHHH
Q psy12149 194 LEREEFYRLKKIQDKKKVIK 213 (243)
Q Consensus 194 ~EREe~~RlK~vK~kk~~~~ 213 (243)
+.|++|.++...|..+.+++
T Consensus 13 msr~eF~~LP~WKq~~lKk~ 32 (36)
T d1unda_ 13 ITRGQFAALPGWKQLQMKKE 32 (36)
T ss_dssp SCHHHHHHSCHHHHHHHHHH
T ss_pred cCHHHHHHCcHHHHHHHHHH
Confidence 67999999999998877653
No 2
>d1es6a2 b.31.1.1 (A:201-321) EV matrix protein {Ebola virus [TaxId: 205488]}
Probab=17.81 E-value=12 Score=25.90 Aligned_cols=15 Identities=20% Similarity=0.399 Sum_probs=12.4
Q ss_pred eeeeeeeeeceeeec
Q psy12149 98 KDNVAGVTLPVFESY 112 (243)
Q Consensus 98 ~~nvmGV~vP~~~~~ 112 (243)
.+||||++||++-+-
T Consensus 55 tkni~gievpellv~ 69 (121)
T d1es6a2 55 TKNIMGIEVPETLVL 69 (121)
T ss_dssp GGTEEEEECCHHHHH
T ss_pred ccceeeeccHHHHHH
Confidence 479999999997653
No 3
>d1r7ja_ a.4.5.49 (A:) Sso10a (SSO10449) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=13.58 E-value=1.6e+02 Score=19.17 Aligned_cols=35 Identities=20% Similarity=0.301 Sum_probs=23.9
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12149 23 LKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGEVM 62 (243)
Q Consensus 23 l~~a~rG~~LLk~KrdaL~~e~~~~~~~~~~~r~~~~~~~ 62 (243)
..+..+|.++|+. ..+|.++.+...+++.++++++
T Consensus 55 Y~iT~kG~~~L~~-----~~~~~~~~~~l~~l~~~i~~~l 89 (90)
T d1r7ja_ 55 YMLTKKGEELLED-----IRKFNEMRKNMDQLKEKINSVL 89 (90)
T ss_dssp EEECHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECccHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHh
Confidence 3456788888876 4567777777777777666553
No 4
>d1yu8x1 a.14.1.1 (X:42-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=13.29 E-value=23 Score=19.79 Aligned_cols=19 Identities=16% Similarity=0.195 Sum_probs=16.0
Q ss_pred hHHHHHHHHHHHHhhHHHH
Q psy12149 194 LEREEFYRLKKIQDKKKVI 212 (243)
Q Consensus 194 ~EREe~~RlK~vK~kk~~~ 212 (243)
+.|++|+++-..|..+.++
T Consensus 12 msr~eF~~LP~WKq~~lKk 30 (35)
T d1yu8x1 12 MTRSAFANLPLWKQQNLKK 30 (35)
T ss_dssp SCHHHHHTSCHHHHHHHHH
T ss_pred CCHHHHHHCcHhHHHHHHH
Confidence 6799999999999877664
No 5
>d2etda1 a.29.9.1 (A:35-183) Hypothetical protein TM0961 {Thermotoga maritima [TaxId: 2336]}
Probab=12.58 E-value=2.2e+02 Score=19.82 Aligned_cols=54 Identities=7% Similarity=-0.028 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12149 16 QSLMKSRLKGAQKGHSLLKKKADALQMRFRMILSKIIETKTLMGEVMKEAAFSL 69 (243)
Q Consensus 16 L~~lk~rl~~a~rG~~LLk~KrdaL~~e~~~~~~~~~~~r~~~~~~~~~a~~~L 69 (243)
|..++.++..+-.+.+..-+||--|+-.+..+++.+.......-..+.++....
T Consensus 1 Lv~l~~~v~~a~s~Idv~L~rR~dli~nLv~~vk~y~~~Ek~~l~~v~~~R~~~ 54 (149)
T d2etda1 1 LVSLEQEVQEKYSQIQNQLQRRADLIPNLVETVKGYAAHEKEILEEIANARAKL 54 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 678999999999999999999999999999888887666555555555555444
No 6
>d1qzpa_ a.14.1.1 (A:) Dematin {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.93 E-value=36 Score=21.81 Aligned_cols=20 Identities=25% Similarity=0.255 Sum_probs=16.4
Q ss_pred hHHHHHHHHHHHHhhHHHHH
Q psy12149 194 LEREEFYRLKKIQDKKKVIK 213 (243)
Q Consensus 194 ~EREe~~RlK~vK~kk~~~~ 213 (243)
+.|++|..+..+|+...+++
T Consensus 45 ms~~eF~~Lp~WKq~~lKk~ 64 (68)
T d1qzpa_ 45 MSPEEFGKLALWKRNELKKK 64 (68)
T ss_dssp SCHHHHHHSCHHHHHHHHHH
T ss_pred cCHHHHHHCcHHHHHHHHHH
Confidence 57999999999998877653
No 7
>d1twfc1 d.74.3.1 (C:3-41,C:173-268) RPB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=8.46 E-value=1.7e+02 Score=20.83 Aligned_cols=23 Identities=17% Similarity=0.293 Sum_probs=18.9
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHH
Q psy12149 24 KGAQKGHSLLKKKADALQMRFRM 46 (243)
Q Consensus 24 ~~a~rG~~LLk~KrdaL~~e~~~ 46 (243)
.+..+|.++|+.|...|+.++.+
T Consensus 109 ~Iv~~ai~iL~~Kl~~l~~~L~~ 131 (135)
T d1twfc1 109 QVVVRGIDTLQKKVASILLALTQ 131 (135)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 35678999999999999887754
No 8
>d1yu5x1 a.14.1.1 (X:10-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=7.20 E-value=45 Score=21.25 Aligned_cols=19 Identities=16% Similarity=0.195 Sum_probs=15.5
Q ss_pred hHHHHHHHHHHHHhhHHHH
Q psy12149 194 LEREEFYRLKKIQDKKKVI 212 (243)
Q Consensus 194 ~EREe~~RlK~vK~kk~~~ 212 (243)
+.|++|..+...|+...++
T Consensus 44 ms~~eF~~LP~WKq~~lKk 62 (67)
T d1yu5x1 44 MTRSAFANLPLWKQQNLKK 62 (67)
T ss_dssp SCHHHHHTSCHHHHHHHHH
T ss_pred cCHHHHHHCcHHHHHHHHH
Confidence 5799999999999877664
No 9
>d1wfda_ a.7.14.1 (A:) Hypothetical protein 1500032H18Rik {Mouse (Mus musculus) [TaxId: 10090]}
Probab=6.95 E-value=2.2e+02 Score=18.30 Aligned_cols=15 Identities=7% Similarity=0.040 Sum_probs=6.9
Q ss_pred hHHHHHHHHHHHHHH
Q psy12149 129 QQLAKLKKNYQTAIK 143 (243)
Q Consensus 129 ~~id~a~~~f~~~l~ 143 (243)
+.+..|.....++++
T Consensus 10 ~~~~~A~~l~~~Av~ 24 (93)
T d1wfda_ 10 SDSTAAVAVLKRAVE 24 (93)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHH
Confidence 444444444444443
No 10
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=6.81 E-value=4.6e+02 Score=21.12 Aligned_cols=55 Identities=16% Similarity=0.339 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh-----hhhcccccchHHHHHH
Q psy12149 133 KLKKNYQTAIKLLVELASLQTSFVTLDDVIKITNRRVNA-----IEHVIIPRIEKTLAYI 187 (243)
Q Consensus 133 ~a~~~f~~~l~~li~lA~~e~~~~~L~~Ei~kT~RRVNA-----LE~vlIP~l~~~IkyI 187 (243)
.....|......+-.+.++...+..+..++....|.-|. |.+..||.++..+..+
T Consensus 300 ~L~~~w~~ek~~l~~i~~Lk~~Le~lr~~le~A~r~gd~e~AaeL~y~~ip~le~el~~l 359 (387)
T d1qvra2 300 KLRAEWEREREILRKLREAQHRLDEVRREIELAERQYDLNRAAELRYGELPKLEAEVEAL 359 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHhhchHHHHHHHHHHH
Confidence 333444444444445555555555555555555444332 4455555555544433
Done!