BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12152
(133 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|156554325|ref|XP_001602968.1| PREDICTED: structure-specific endonuclease subunit slx1-like
[Nasonia vitripennis]
Length = 269
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 89/125 (71%), Positives = 104/125 (83%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY +N +Y GRTYIGYTVDP RRIKQHN GKDFGGA +TSNRGPW+MVLIV+GF
Sbjct: 11 FFGVYLLYCKNVKYKGRTYIGYTVDPKRRIKQHNAGKDFGGAWRTSNRGPWEMVLIVHGF 70
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
PN SALRFEWAWQHP++SRRL+HV RKKS++ ++ YCL +L ML PW RLPLTV+W
Sbjct: 71 PNSTSALRFEWAWQHPELSRRLRHVPRKKSRQKSFDYCLTVLSAMLHVGPWSRLPLTVRW 130
Query: 123 LKPEY 127
L E+
Sbjct: 131 LDDEF 135
>gi|307205095|gb|EFN83566.1| GIY-YIG domain-containing protein 1 [Harpegnathos saltator]
Length = 270
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 85/127 (66%), Positives = 101/127 (79%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY NP+Y GRTYIGYTVDP RRIKQHN GK +GGA KTSNRGPWDMVLIV+GF
Sbjct: 11 FFGVYLLYCINPKYKGRTYIGYTVDPKRRIKQHNAGKKYGGAWKTSNRGPWDMVLIVHGF 70
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
PN SALRFEWAWQHP +SRRL+H+ +KKS + + +CL +L ML+ PW LPLT++W
Sbjct: 71 PNSTSALRFEWAWQHPHVSRRLKHIPKKKSSQKAFEFCLTVLSEMLKVGPWCCLPLTIRW 130
Query: 123 LKPEYQQ 129
L E+ +
Sbjct: 131 LDYEFSK 137
>gi|91084301|ref|XP_971859.1| PREDICTED: similar to GIY-YIG domain containing 2 [Tribolium
castaneum]
gi|270008803|gb|EFA05251.1| hypothetical protein TcasGA2_TC015403 [Tribolium castaneum]
Length = 241
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 86/133 (64%), Positives = 107/133 (80%)
Query: 1 MVFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
M F GVYLLY NP+Y GR YIGYTVDP+RRIKQHN+GK GGA KTS +GPW MVLI++
Sbjct: 1 MHFFGVYLLYCTNPKYRGRVYIGYTVDPNRRIKQHNRGKQHGGAWKTSQKGPWSMVLIIH 60
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTV 120
GFPN+ISALRFEWAWQHP +SRRL HV++K +KE Y + +R+L MLQ PW+RLPLT+
Sbjct: 61 GFPNNISALRFEWAWQHPHVSRRLAHVSKKNTKEKVYDFTIRVLSEMLQVGPWKRLPLTI 120
Query: 121 QWLKPEYQQVLTE 133
+WL E+++ L +
Sbjct: 121 RWLNDEFRRDLEK 133
>gi|291231787|ref|XP_002735844.1| PREDICTED: GIY-YIG domain-containing protein, putative-like
[Saccoglossus kowalevskii]
Length = 274
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 82/126 (65%), Positives = 100/126 (79%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F G YLLY NP+Y GRTYIGYTVDP RRI QHNKG FGGA +TS +GPW+MVLI++GF
Sbjct: 8 FFGCYLLYCTNPKYKGRTYIGYTVDPRRRITQHNKGSKFGGACRTSGKGPWEMVLIIHGF 67
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
PN+ISALRFEWAWQHPK SRRL H+ K+ KE + +C R+L ML+ PW RLPLT++W
Sbjct: 68 PNNISALRFEWAWQHPKRSRRLCHLTGKQKKENQFQFCFRILSNMLRVGPWNRLPLTIRW 127
Query: 123 LKPEYQ 128
LK +++
Sbjct: 128 LKQDFK 133
>gi|307183277|gb|EFN70146.1| GIY-YIG domain-containing protein 1 [Camponotus floridanus]
Length = 264
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 84/127 (66%), Positives = 100/127 (78%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY NP+Y GRTYIGYTVDP RRIKQHN GK GGA KTS +GPW+M+LIVYGF
Sbjct: 12 FFGVYLLYCTNPKYRGRTYIGYTVDPRRRIKQHNAGKKHGGAWKTSQKGPWNMILIVYGF 71
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
PN SALRFEWAWQHP SRRL+H+ +KKS +T + +CL +L ML+ PW RLPLT++W
Sbjct: 72 PNSTSALRFEWAWQHPHESRRLKHIPKKKSTQTKFDFCLIILSEMLKVGPWHRLPLTLRW 131
Query: 123 LKPEYQQ 129
L E+ +
Sbjct: 132 LDYEFSK 138
>gi|332372746|gb|AEE61515.1| unknown [Dendroctonus ponderosae]
Length = 252
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 83/123 (67%), Positives = 102/123 (82%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYG 61
FHGVYLLY NP+YLGR YIGYTVDP+RRI +HNKGK +GGA++TS RGPW MVLIV+G
Sbjct: 4 AFHGVYLLYCENPKYLGRCYIGYTVDPNRRIVKHNKGKQYGGAYRTSQRGPWTMVLIVHG 63
Query: 62 FPNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQ 121
F ++ISAL+FEWAWQH + SRRLQHV +KKS+E ++ + L +L MLQ PWQRLPLT++
Sbjct: 64 FLDEISALKFEWAWQHSQKSRRLQHVGKKKSREKSFDFYLTVLGQMLQVGPWQRLPLTIR 123
Query: 122 WLK 124
WL
Sbjct: 124 WLN 126
>gi|198434798|ref|XP_002127269.1| PREDICTED: similar to GIY-YIG domain containing 2 [Ciona
intestinalis]
Length = 310
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 82/130 (63%), Positives = 102/130 (78%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F G YLLYSRN +Y GRTYIG+TV+P+RRI QHN G GGA++TS RGPWDM +IV+GF
Sbjct: 8 FFGCYLLYSRNSKYKGRTYIGFTVNPERRISQHNAGASKGGAYRTSGRGPWDMTMIVHGF 67
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P+DI+ALRFEWAWQ+PK SRRL+H+ K KE+ + Y +R++ ML PW++LPLTVQW
Sbjct: 68 PSDIAALRFEWAWQNPKRSRRLKHITCKTRKESMFQYRIRIMSNMLTQTPWKKLPLTVQW 127
Query: 123 LKPEYQQVLT 132
LK EY LT
Sbjct: 128 LKQEYAVDLT 137
>gi|327280622|ref|XP_003225051.1| PREDICTED: structure-specific endonuclease subunit slx1-like
[Anolis carolinensis]
Length = 270
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/127 (67%), Positives = 102/127 (80%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY NPRY GR YIG+TV+P+RRI QHN GK GGA KTS RGPWDMVLIV+GF
Sbjct: 8 FFGVYLLYCTNPRYHGRIYIGFTVNPERRIIQHNAGKRRGGAWKTSGRGPWDMVLIVHGF 67
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P+D++ALRFEWAWQHP SRRL HV R+ S+E + + LR+L ML+TAPW RLPLT++W
Sbjct: 68 PSDVAALRFEWAWQHPHSSRRLNHVTRRTSRERQFDFHLRVLAHMLRTAPWCRLPLTIRW 127
Query: 123 LKPEYQQ 129
LK EY +
Sbjct: 128 LKQEYAR 134
>gi|321464388|gb|EFX75396.1| hypothetical protein DAPPUDRAFT_306753 [Daphnia pulex]
Length = 260
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 81/127 (63%), Positives = 106/127 (83%), Gaps = 1/127 (0%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+GVYLL+ NP+YLGRTYIGYTV+P+RRI+QHNKG GGA+KTSN+GPW+M LI++GF
Sbjct: 9 FYGVYLLFCENPKYLGRTYIGYTVNPNRRIQQHNKGVRSGGAYKTSNKGPWEMCLIIHGF 68
Query: 63 PNDISALRFEWAWQHPKMSRRLQH-VARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQ 121
PNDIS LRFEWAWQHP+ SRRL+ + RK++KE ++ + +R+L ML+ PW RL LT+Q
Sbjct: 69 PNDISGLRFEWAWQHPEKSRRLRKLIERKRTKENSFQHKIRILSHMLRIGPWNRLALTIQ 128
Query: 122 WLKPEYQ 128
WL P+Y+
Sbjct: 129 WLVPKYR 135
>gi|147901424|ref|NP_001090376.1| structure-specific endonuclease subunit slx1 [Xenopus laevis]
gi|123911486|sp|Q0IH86.1|SLX1_XENLA RecName: Full=Structure-specific endonuclease subunit slx1;
AltName: Full=GIY-YIG domain-containing protein 1
gi|114108307|gb|AAI23265.1| Giyd1 protein [Xenopus laevis]
Length = 282
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 83/127 (65%), Positives = 105/127 (82%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+GVYLL+ NP+Y GR YIG+TV+P+RRI+QHN GK GGA KTS RGPWDMVLIV+GF
Sbjct: 8 FYGVYLLFCTNPKYKGRIYIGFTVNPERRIQQHNGGKHKGGAWKTSGRGPWDMVLIVHGF 67
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
PNDI+ALRFEWAWQHP +SRRL HV RK K++++ + L +L ML+ APW RLPLT++W
Sbjct: 68 PNDIAALRFEWAWQHPHVSRRLTHVPRKTKKQSSFDFHLLVLCHMLRVAPWNRLPLTLRW 127
Query: 123 LKPEYQQ 129
L+ EY++
Sbjct: 128 LRQEYRR 134
>gi|301628680|ref|XP_002943477.1| PREDICTED: structure-specific endonuclease subunit slx1 [Xenopus
(Silurana) tropicalis]
Length = 277
Score = 182 bits (461), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 83/127 (65%), Positives = 105/127 (82%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+GVYLL+ NP+Y GR YIG+TV+P+RRI+QHN GK GGA KTS RGPWDMVLIV+GF
Sbjct: 8 FYGVYLLFCTNPKYKGRIYIGFTVNPERRIQQHNGGKHKGGAWKTSGRGPWDMVLIVHGF 67
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
PNDI+ALRFEWAWQHP +SRRL HV RK K++++ + L +L ML+ APW RLPLT++W
Sbjct: 68 PNDIAALRFEWAWQHPHVSRRLTHVPRKPKKQSSFDFHLLVLSHMLRVAPWNRLPLTLRW 127
Query: 123 LKPEYQQ 129
L+ EY++
Sbjct: 128 LRQEYRR 134
>gi|260803485|ref|XP_002596620.1| hypothetical protein BRAFLDRAFT_219192 [Branchiostoma floridae]
gi|229281879|gb|EEN52632.1| hypothetical protein BRAFLDRAFT_219192 [Branchiostoma floridae]
Length = 155
Score = 181 bits (460), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 81/125 (64%), Positives = 101/125 (80%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+GVYLLY NP+Y GRTYIG+T DP+RRIKQHN G GGA +TS RGPW+MVLI++GF
Sbjct: 8 FYGVYLLYCINPKYKGRTYIGFTNDPNRRIKQHNTGTKAGGARRTSGRGPWEMVLIIHGF 67
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
PN+ISALRFEWAWQHP SRRL+H+ +K S+ET + + RL+ ML+ PW +LPLT++W
Sbjct: 68 PNNISALRFEWAWQHPDKSRRLRHLPKKSSRETAFQHKFRLVSNMLRVGPWSKLPLTIRW 127
Query: 123 LKPEY 127
LK EY
Sbjct: 128 LKQEY 132
>gi|346472947|gb|AEO36318.1| hypothetical protein [Amblyomma maculatum]
Length = 250
Score = 181 bits (460), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 83/126 (65%), Positives = 98/126 (77%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+G YLLY NP+Y G TYIG+TVDP+RRIKQHNKG GGA +TS +GPWDM LIV+GF
Sbjct: 6 FYGCYLLYCTNPKYKGHTYIGFTVDPNRRIKQHNKGFKAGGAWRTSRKGPWDMALIVHGF 65
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
PN+ISALRFEWAWQHP+ SRRL HV K KE+ + Y R++ ML+ PW RLPLTVQW
Sbjct: 66 PNEISALRFEWAWQHPERSRRLSHVGAKLRKESRFAYAFRVVSHMLRAVPWVRLPLTVQW 125
Query: 123 LKPEYQ 128
L +YQ
Sbjct: 126 LIEDYQ 131
>gi|340381878|ref|XP_003389448.1| PREDICTED: structure-specific endonuclease subunit SLX1 homolog
[Amphimedon queenslandica]
Length = 274
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 100/128 (78%), Gaps = 1/128 (0%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
FHGVY L S+NP+Y GRTYIGYTV+P RR+KQHN G GGA KTS RGPWDM+LIV+GF
Sbjct: 25 FHGVYFLLSKNPKYKGRTYIGYTVNPIRRLKQHNGGIKKGGARKTSGRGPWDMILIVHGF 84
Query: 63 PNDISALRFEWAWQHPKMSRRL-QHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQ 121
PNDI+ALRFEWAWQHP SRR+ V + S+ET+ + LR+L ML PW RLPLT++
Sbjct: 85 PNDIAALRFEWAWQHPSKSRRIDSSVVKHVSRETSLQFKLRILSYMLSVGPWHRLPLTIR 144
Query: 122 WLKPEYQQ 129
WLK +Y+Q
Sbjct: 145 WLKQDYEQ 152
>gi|383863527|ref|XP_003707232.1| PREDICTED: structure-specific endonuclease subunit slx1-like
[Megachile rotundata]
Length = 261
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 78/125 (62%), Positives = 101/125 (80%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+GVYLLY NP+Y GRTYIGYTVDP RR+KQHN GK+ GA KTSN+GPW+MVLI++GF
Sbjct: 10 FYGVYLLYCMNPKYKGRTYIGYTVDPRRRLKQHNAGKEHRGAWKTSNKGPWNMVLIIHGF 69
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
PN +ALRFEWAWQHP +SRRL+HV +KK+++ + +CL ++ ML PW RLPLT++W
Sbjct: 70 PNRTAALRFEWAWQHPHVSRRLKHVPKKKARQKVFEFCLLVVSEMLNVGPWCRLPLTIRW 129
Query: 123 LKPEY 127
L ++
Sbjct: 130 LNYDF 134
>gi|332026295|gb|EGI66431.1| Structure-specific endonuclease subunit slx1 [Acromyrmex
echinatior]
Length = 269
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 82/127 (64%), Positives = 99/127 (77%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY NP+Y GRTYIGYTVDP RRIKQHN GK GGA KTSNRGPW+M+LIV+GF
Sbjct: 12 FFGVYLLYCMNPKYKGRTYIGYTVDPRRRIKQHNAGKKHGGAWKTSNRGPWNMILIVHGF 71
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
PN SALRFEWAWQHP +SRRL+H+ +KKS + + L +L ML+ PW RLPLT++W
Sbjct: 72 PNSTSALRFEWAWQHPDVSRRLKHIPKKKSSQKILDFRLIVLSEMLKIGPWCRLPLTIRW 131
Query: 123 LKPEYQQ 129
L ++ +
Sbjct: 132 LDYQFSK 138
>gi|432921373|ref|XP_004080126.1| PREDICTED: structure-specific endonuclease subunit slx1-like
[Oryzias latipes]
Length = 264
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 80/126 (63%), Positives = 101/126 (80%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVY+LY RNPR+ GR YIG+TV+P+RRI QHN G+ GGA +TS RGPW+MVLI++GF
Sbjct: 8 FFGVYMLYCRNPRFKGRIYIGFTVNPERRIGQHNAGRHRGGAKRTSGRGPWEMVLIIHGF 67
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P+DI+ALRFEWAWQHP SRRL HVAR+ KE++ + R++ ML+ APW RLPLT +W
Sbjct: 68 PSDIAALRFEWAWQHPHSSRRLPHVARRSRKESSLQFHWRVVSNMLRVAPWNRLPLTARW 127
Query: 123 LKPEYQ 128
LK EY+
Sbjct: 128 LKQEYR 133
>gi|193690675|ref|XP_001952337.1| PREDICTED: structure-specific endonuclease subunit SLX1 homolog
[Acyrthosiphon pisum]
Length = 250
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 83/126 (65%), Positives = 96/126 (76%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+GVYLLY N + G+TYIGYT DP+RRIKQHNKG GGA KTS RGPW+MVLIV+GF
Sbjct: 8 FYGVYLLYCLNEKSKGKTYIGYTKDPNRRIKQHNKGVKSGGARKTSLRGPWEMVLIVHGF 67
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
PNDISALRFEWAWQ+PK SRRL+H+A K E Y YC+R+L ML PW RL L V+W
Sbjct: 68 PNDISALRFEWAWQNPKTSRRLKHIALKSRTEKAYDYCIRILSEMLHVGPWNRLALNVRW 127
Query: 123 LKPEYQ 128
L Y+
Sbjct: 128 LNMHYR 133
>gi|322802003|gb|EFZ22540.1| hypothetical protein SINV_06653 [Solenopsis invicta]
Length = 266
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 82/127 (64%), Positives = 100/127 (78%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY NP+Y GRTYIGYTVDP RRIKQHN GK+ GGA +TS RGPW+MVLIV+GF
Sbjct: 11 FFGVYLLYCMNPKYKGRTYIGYTVDPRRRIKQHNAGKNHGGAWQTSKRGPWNMVLIVHGF 70
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
PN SALRFEWAWQHP +SRRL+H+ +KK+ + + + L +L ML+ PW RLPLTV+W
Sbjct: 71 PNSTSALRFEWAWQHPHVSRRLKHIPKKKASQKIFDFRLVVLSEMLKIGPWCRLPLTVRW 130
Query: 123 LKPEYQQ 129
L E+ +
Sbjct: 131 LDYEFSK 137
>gi|334335449|ref|XP_003341776.1| PREDICTED: structure-specific endonuclease subunit SLX1-like
[Monodelphis domestica]
Length = 270
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 80/130 (61%), Positives = 103/130 (79%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY NP+Y GR Y+G+TV+P RRI+QHN G+ GGA +TS RGPW+MVLIV+GF
Sbjct: 16 FFGVYLLYCLNPKYRGRVYVGFTVNPSRRIQQHNAGRKKGGAWRTSGRGPWEMVLIVHGF 75
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P+D++ALRFEWAWQHP SRRL H++ + KE + + LR+L MLQ APW RLPLT++W
Sbjct: 76 PSDVAALRFEWAWQHPGSSRRLAHISGRTRKEGAFFFHLRVLAQMLQVAPWNRLPLTLRW 135
Query: 123 LKPEYQQVLT 132
L+ E+QQ L+
Sbjct: 136 LRQEFQQELS 145
>gi|157104667|ref|XP_001648514.1| hypothetical protein AaeL_AAEL004145 [Aedes aegypti]
gi|108880287|gb|EAT44512.1| AAEL004145-PA [Aedes aegypti]
Length = 175
Score = 179 bits (453), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 83/130 (63%), Positives = 104/130 (80%), Gaps = 5/130 (3%)
Query: 3 FHGVYLLYSR--NPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F+GVYLL S+ NP++ GRTYIGYTVDP+RRIKQHN G+D GGA +TSNRGPW MV+IV+
Sbjct: 14 FYGVYLLVSKSINPKFAGRTYIGYTVDPNRRIKQHNGGQDAGGAKRTSNRGPWVMVMIVH 73
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQHV---ARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFPN+ISALRFEWAWQ PK+SRRL+ + RK+ KE+ + Y R+L ML+ PW RLP
Sbjct: 74 GFPNNISALRFEWAWQQPKVSRRLKQIPELQRKQRKESNFEYNFRILTEMLRIGPWNRLP 133
Query: 118 LTVQWLKPEY 127
LTV+WL ++
Sbjct: 134 LTVRWLADDF 143
>gi|125822492|ref|XP_001337124.1| PREDICTED: structure-specific endonuclease subunit slx1-like [Danio
rerio]
Length = 260
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 77/126 (61%), Positives = 102/126 (80%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+GVY+LY NP++ GR YIG+TV+P+RRI QHN G+ GGA +TS RGPW+MVLI++GF
Sbjct: 8 FYGVYMLYCTNPKFKGRIYIGFTVNPERRIGQHNAGRHRGGAKRTSGRGPWEMVLIIHGF 67
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P+DI+ALRFEWAWQHP +SRRL HV+R+ KE+ + R++ ML+ APW RLP+TV+W
Sbjct: 68 PSDIAALRFEWAWQHPHISRRLSHVSRRSRKESGLQFHWRVVSNMLRVAPWSRLPITVRW 127
Query: 123 LKPEYQ 128
LK EY+
Sbjct: 128 LKQEYR 133
>gi|347967485|ref|XP_565552.4| AGAP002259-PA [Anopheles gambiae str. PEST]
gi|333466273|gb|EAL42010.4| AGAP002259-PA [Anopheles gambiae str. PEST]
Length = 375
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 102/130 (78%), Gaps = 5/130 (3%)
Query: 3 FHGVYLLYSR--NPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F+GVYLL S+ NP++ GRTYIGYTVDP+RRIKQHN+G+D GGA +TSNRGPW MVLIV+
Sbjct: 10 FYGVYLLVSKSPNPKFAGRTYIGYTVDPNRRIKQHNRGEDAGGARRTSNRGPWTMVLIVH 69
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQHVA---RKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFPN+ISALRFEWAWQ P++SRRL+ + +K KE+ + Y R+L ML+ PW RLP
Sbjct: 70 GFPNNISALRFEWAWQQPRVSRRLKQMPELQKKLRKESNFEYNFRILTEMLRMGPWNRLP 129
Query: 118 LTVQWLKPEY 127
L V+W E+
Sbjct: 130 LVVRWFADEF 139
>gi|391336279|ref|XP_003742509.1| PREDICTED: structure-specific endonuclease subunit SLX1-like
[Metaseiulus occidentalis]
Length = 252
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 83/130 (63%), Positives = 101/130 (77%), Gaps = 1/130 (0%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLL P+Y+G TYIG+TVDP RRIKQHNKG GGA+ T+ +G WDM L+V+GF
Sbjct: 14 FFGVYLLSCTTPQYMGDTYIGFTVDPVRRIKQHNKGVVAGGAYTTNRKGTWDMTLVVHGF 73
Query: 63 PNDISALRFEWAWQHPKMSRRLQHV-ARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQ 121
PND SALRFEW+WQHPK SRRL HV AR+ KE+ + Y LR+L +ML TAPW+RL LT+Q
Sbjct: 74 PNDKSALRFEWSWQHPKKSRRLAHVPARRYRKESKFEYALRVLSVMLTTAPWKRLSLTLQ 133
Query: 122 WLKPEYQQVL 131
WL P+Y + L
Sbjct: 134 WLIPKYIKEL 143
>gi|241638399|ref|XP_002409113.1| GIY-YIG domain-containing protein, putative [Ixodes scapularis]
gi|215501303|gb|EEC10797.1| GIY-YIG domain-containing protein, putative [Ixodes scapularis]
Length = 246
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 79/126 (62%), Positives = 97/126 (76%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+G YLLY NP+Y G TYIG+TVDP+RR+KQHNKG GGA +TS +G WDM LI++GF
Sbjct: 8 FYGCYLLYCTNPKYKGHTYIGFTVDPNRRVKQHNKGLKAGGAWRTSTKGQWDMPLIIHGF 67
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
PN+ISALRFEWAWQHP SRRL HV +K KE+ + + R++ ML+ PW RLPLTVQW
Sbjct: 68 PNEISALRFEWAWQHPDKSRRLGHVEKKNRKESRFEFAFRVVSHMLRVGPWTRLPLTVQW 127
Query: 123 LKPEYQ 128
L EY+
Sbjct: 128 LMEEYR 133
>gi|348544587|ref|XP_003459762.1| PREDICTED: structure-specific endonuclease subunit slx1-like
[Oreochromis niloticus]
Length = 280
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 77/126 (61%), Positives = 100/126 (79%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVY+LY NP++ GR YIG+TV+P+RRI QHN G+ GGA +TS RGPW+MVLI++GF
Sbjct: 8 FFGVYMLYCINPKFKGRIYIGFTVNPERRIGQHNAGRHRGGAKRTSGRGPWEMVLIIHGF 67
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P+DI+ALRFEWAWQHP SRRL HV+R+ KE++ + R++ ML+ APW RLPLT +W
Sbjct: 68 PSDIAALRFEWAWQHPHSSRRLTHVSRRSRKESSLEFHWRVVSNMLRVAPWNRLPLTARW 127
Query: 123 LKPEYQ 128
LK EY+
Sbjct: 128 LKQEYR 133
>gi|259511486|sp|Q5TXB2.3|SLX1_ANOGA RecName: Full=Structure-specific endonuclease subunit SLX1 homolog
Length = 273
Score = 175 bits (443), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 81/132 (61%), Positives = 103/132 (78%), Gaps = 5/132 (3%)
Query: 3 FHGVYLLYSR--NPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F+GVYLL S+ NP++ GRTYIGYTVDP+RRIKQHN+G+D GGA +TSNRGPW MVLIV+
Sbjct: 10 FYGVYLLVSKSPNPKFAGRTYIGYTVDPNRRIKQHNRGEDAGGARRTSNRGPWTMVLIVH 69
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQ---HVARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFPN+ISALRFEWAWQ P++SRRL+ + +K KE+ + Y R+L ML+ PW RLP
Sbjct: 70 GFPNNISALRFEWAWQQPRVSRRLKQMPELQKKLRKESNFEYNFRILTEMLRMGPWNRLP 129
Query: 118 LTVQWLKPEYQQ 129
L V+W E+ +
Sbjct: 130 LVVRWFADEFHR 141
>gi|405966613|gb|EKC31875.1| Structure-specific endonuclease subunit slx1 [Crassostrea gigas]
Length = 292
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 78/125 (62%), Positives = 99/125 (79%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY+ NP++ GRTYIG+TV+P+RRI+QHNKGK GGA +T RGPW+MVLI++GF
Sbjct: 10 FFGVYLLYNVNPQFKGRTYIGFTVNPNRRIQQHNKGKHAGGAWRTHGRGPWEMVLIIHGF 69
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
PN+ISALRFEWAWQ+PK SRRL+H+ K KE + Y R++ ML T PW R LT++W
Sbjct: 70 PNEISALRFEWAWQNPKKSRRLKHLPVKTKKENQFQYRFRIVSAMLNTCPWCRFALTIRW 129
Query: 123 LKPEY 127
LK +Y
Sbjct: 130 LKQQY 134
>gi|149067865|gb|EDM17417.1| GIY-YIG domain containing 2, isoform CRA_b [Rattus norvegicus]
Length = 233
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 76/130 (58%), Positives = 102/130 (78%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY +NPR+ GR Y+G+TV+P RR++QHN G+ GGA +TS RGPWDMVLI++GF
Sbjct: 10 FFGVYLLYCQNPRHRGRVYVGFTVNPARRVRQHNAGRKKGGAWRTSGRGPWDMVLILHGF 69
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P+ ++ALRFEWAWQHP+ SRRL HV + E ++T+ LR+L ML+ PW RLPLTV+W
Sbjct: 70 PSAVAALRFEWAWQHPQASRRLTHVGPRLRSEASFTFHLRVLAHMLRVPPWVRLPLTVRW 129
Query: 123 LKPEYQQVLT 132
L+P+++ L
Sbjct: 130 LRPDFRHELC 139
>gi|149067866|gb|EDM17418.1| GIY-YIG domain containing 2, isoform CRA_c [Rattus norvegicus]
Length = 280
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 76/130 (58%), Positives = 102/130 (78%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY +NPR+ GR Y+G+TV+P RR++QHN G+ GGA +TS RGPWDMVLI++GF
Sbjct: 10 FFGVYLLYCQNPRHRGRVYVGFTVNPARRVRQHNAGRKKGGAWRTSGRGPWDMVLILHGF 69
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P+ ++ALRFEWAWQHP+ SRRL HV + E ++T+ LR+L ML+ PW RLPLTV+W
Sbjct: 70 PSAVAALRFEWAWQHPQASRRLTHVGPRLRSEASFTFHLRVLAHMLRVPPWVRLPLTVRW 129
Query: 123 LKPEYQQVLT 132
L+P+++ L
Sbjct: 130 LRPDFRHELC 139
>gi|57164135|ref|NP_001009292.1| structure-specific endonuclease subunit SLX1 [Rattus norvegicus]
gi|81883250|sp|Q5PQP5.1|SLX1_RAT RecName: Full=Structure-specific endonuclease subunit SLX1;
AltName: Full=GIY-YIG domain-containing protein 1
gi|56268881|gb|AAH87090.1| GIY-YIG domain containing 2 [Rattus norvegicus]
gi|149067867|gb|EDM17419.1| GIY-YIG domain containing 2, isoform CRA_d [Rattus norvegicus]
Length = 271
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 76/130 (58%), Positives = 102/130 (78%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY +NPR+ GR Y+G+TV+P RR++QHN G+ GGA +TS RGPWDMVLI++GF
Sbjct: 10 FFGVYLLYCQNPRHRGRVYVGFTVNPARRVRQHNAGRKKGGAWRTSGRGPWDMVLILHGF 69
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P+ ++ALRFEWAWQHP+ SRRL HV + E ++T+ LR+L ML+ PW RLPLTV+W
Sbjct: 70 PSAVAALRFEWAWQHPQASRRLTHVGPRLRSEASFTFHLRVLAHMLRVPPWVRLPLTVRW 129
Query: 123 LKPEYQQVLT 132
L+P+++ L
Sbjct: 130 LRPDFRHELC 139
>gi|148685465|gb|EDL17412.1| GIY-YIG domain containing 2, isoform CRA_b [Mus musculus]
Length = 233
Score = 171 bits (434), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 100/130 (76%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY +NPR+ GR Y+G+TV+P RR++QHN G+ GGA +TS RGPWDMVLI++GF
Sbjct: 10 FFGVYLLYCQNPRHRGRVYVGFTVNPARRVRQHNAGRKKGGAWRTSGRGPWDMVLIIHGF 69
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P+ ++ALRFEWAWQHP+ SRRL HV + E + + LR+L ML+ PW RLPLT++W
Sbjct: 70 PSAVAALRFEWAWQHPQASRRLTHVGPRLRSEAAFAFHLRVLAHMLRVPPWVRLPLTLRW 129
Query: 123 LKPEYQQVLT 132
L+P+++ L
Sbjct: 130 LRPDFRHELC 139
>gi|395747670|ref|XP_002826341.2| PREDICTED: structure-specific endonuclease subunit SLX1 [Pongo
abelii]
Length = 354
Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 100/130 (76%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY NPRY GR Y+G+TV+P RR++QHN G+ GGA +TS RGPW+MVL+V+GF
Sbjct: 92 FFGVYLLYCLNPRYRGRVYVGFTVNPGRRVQQHNGGRKKGGAWRTSGRGPWEMVLVVHGF 151
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P+ ++ALRFEWAWQHP SRRL HV + ET + + LR+L ML++ PW RLPLT++W
Sbjct: 152 PSSVAALRFEWAWQHPHASRRLAHVGPRLRGETAFAFHLRVLAHMLRSPPWARLPLTLRW 211
Query: 123 LKPEYQQVLT 132
++P+ +Q L
Sbjct: 212 VRPDLRQDLC 221
>gi|443683296|gb|ELT87595.1| hypothetical protein CAPTEDRAFT_226573 [Capitella teleta]
Length = 283
Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 77/125 (61%), Positives = 99/125 (79%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVY+LY+ NPRY G+TYIG+TVDP+RR+KQHN G+ GGA +T RGPW+MV+IV+GF
Sbjct: 8 FFGVYILYNVNPRYKGQTYIGFTVDPNRRVKQHNTGRHAGGAKRTDGRGPWEMVIIVHGF 67
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
PN ISAL FEWAWQ+P SRRL+HV RK+ E + + LR++ ML++ PW RLPLT +W
Sbjct: 68 PNKISALGFEWAWQNPHKSRRLKHVNRKQKTEDPFQFRLRVVCEMLRSGPWTRLPLTFRW 127
Query: 123 LKPEY 127
LK +Y
Sbjct: 128 LKQQY 132
>gi|82697331|ref|NP_001032533.1| structure-specific endonuclease subunit SLX1 [Bos taurus]
gi|122138885|sp|Q32PI0.1|SLX1_BOVIN RecName: Full=Structure-specific endonuclease subunit SLX1;
AltName: Full=GIY-YIG domain-containing protein 1
gi|79153460|gb|AAI08109.1| GIY-YIG domain containing [Bos taurus]
gi|296473263|tpg|DAA15378.1| TPA: structure-specific endonuclease subunit SLX1 [Bos taurus]
Length = 267
Score = 171 bits (433), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 101/131 (77%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYG 61
F GVYLLY NPR+ GR Y+G+TV+P RR++QHN G+ GGA +TS RGPW+MVLIV+G
Sbjct: 5 CFFGVYLLYCLNPRHRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGRGPWEMVLIVHG 64
Query: 62 FPNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQ 121
FP+ ++ALRFEWAWQHP+ SRRL HV R+ E T+ + LR+L ML+ PW RLPLT++
Sbjct: 65 FPSAVAALRFEWAWQHPQASRRLTHVGRRLRGEATFAFHLRVLAHMLRAPPWVRLPLTLR 124
Query: 122 WLKPEYQQVLT 132
WL+ +++Q L
Sbjct: 125 WLRADFRQDLC 135
>gi|12852787|dbj|BAB29533.1| unnamed protein product [Mus musculus]
gi|148685468|gb|EDL17415.1| GIY-YIG domain containing 2, isoform CRA_e [Mus musculus]
Length = 204
Score = 171 bits (433), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 100/130 (76%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY +NPR+ GR Y+G+TV+P RR++QHN G+ GGA +TS RGPWDMVLI++GF
Sbjct: 10 FFGVYLLYCQNPRHRGRVYVGFTVNPARRVRQHNAGRKKGGAWRTSGRGPWDMVLIIHGF 69
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P+ ++ALRFEWAWQHP+ SRRL HV + E + + LR+L ML+ PW RLPLT++W
Sbjct: 70 PSAVAALRFEWAWQHPQASRRLTHVGPRLRSEAAFAFHLRVLAHMLRVPPWVRLPLTLRW 129
Query: 123 LKPEYQQVLT 132
L+P+++ L
Sbjct: 130 LRPDFRHELC 139
>gi|62543493|ref|NP_083696.2| structure-specific endonuclease subunit SLX1 [Mus musculus]
gi|81897891|sp|Q8BX32.1|SLX1_MOUSE RecName: Full=Structure-specific endonuclease subunit SLX1;
AltName: Full=GIY-YIG domain-containing protein 1
gi|26339806|dbj|BAC33566.1| unnamed protein product [Mus musculus]
gi|148685466|gb|EDL17413.1| GIY-YIG domain containing 2, isoform CRA_c [Mus musculus]
gi|148877973|gb|AAI45689.1| GIY-YIG domain containing 2 [Mus musculus]
Length = 270
Score = 171 bits (433), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 100/130 (76%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY +NPR+ GR Y+G+TV+P RR++QHN G+ GGA +TS RGPWDMVLI++GF
Sbjct: 10 FFGVYLLYCQNPRHRGRVYVGFTVNPARRVRQHNAGRKKGGAWRTSGRGPWDMVLIIHGF 69
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P+ ++ALRFEWAWQHP+ SRRL HV + E + + LR+L ML+ PW RLPLT++W
Sbjct: 70 PSAVAALRFEWAWQHPQASRRLTHVGPRLRSEAAFAFHLRVLAHMLRVPPWVRLPLTLRW 129
Query: 123 LKPEYQQVLT 132
L+P+++ L
Sbjct: 130 LRPDFRHELC 139
>gi|441676201|ref|XP_003282666.2| PREDICTED: structure-specific endonuclease subunit SLX1-like
isoform 1 [Nomascus leucogenys]
Length = 354
Score = 171 bits (433), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 76/130 (58%), Positives = 99/130 (76%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY NPRY GR Y+G+TV+P RR++QHN G+ GGA +TS RGPW+MVL+V+GF
Sbjct: 92 FFGVYLLYCLNPRYRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVHGF 151
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P+ ++ALRFEWAWQHP SRRL HV + ET + + LR+L ML+ PW RLPLT++W
Sbjct: 152 PSSVAALRFEWAWQHPHASRRLAHVGPRLRGETAFAFHLRVLAHMLRAPPWVRLPLTLRW 211
Query: 123 LKPEYQQVLT 132
L+P+ +Q L
Sbjct: 212 LRPDLRQDLC 221
>gi|47209184|emb|CAF93873.1| unnamed protein product [Tetraodon nigroviridis]
Length = 225
Score = 171 bits (433), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 74/126 (58%), Positives = 98/126 (77%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVY+LY NP+Y GR YIG+TV+P+RR+ QHN G+ GGA +TS RGPW+M+LI++GF
Sbjct: 1 FFGVYMLYCTNPKYKGRIYIGFTVNPERRVTQHNAGRHKGGAKRTSGRGPWEMLLIIHGF 60
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P+DI+ALRFEWAWQHP SRRL HV ++ KE++ + R++ MLQ APW R PLT +W
Sbjct: 61 PSDIAALRFEWAWQHPHSSRRLSHVCKRFRKESSLQFHWRVVSNMLQVAPWNRQPLTARW 120
Query: 123 LKPEYQ 128
LK E++
Sbjct: 121 LKQEFK 126
>gi|348584264|ref|XP_003477892.1| PREDICTED: structure-specific endonuclease subunit SLX1-like [Cavia
porcellus]
Length = 266
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 100/130 (76%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY NPR GR Y+G+TV+P RR++QHN G+ GGA +TS RGPW+MVL+V+GF
Sbjct: 13 FFGVYLLYCLNPRNRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVHGF 72
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P+ ++ALRFEWAWQHP SRRL HV R+ ET++ + LR+L ML++ PW RLPLT++W
Sbjct: 73 PSAVAALRFEWAWQHPSASRRLVHVGRRVRSETSFAFHLRVLAAMLRSPPWVRLPLTLRW 132
Query: 123 LKPEYQQVLT 132
L P++ + L
Sbjct: 133 LCPDFCRDLC 142
>gi|402908127|ref|XP_003916806.1| PREDICTED: structure-specific endonuclease subunit SLX1-like [Papio
anubis]
Length = 275
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 76/130 (58%), Positives = 99/130 (76%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY NPRY GR Y+G+TV+P RR++QHN G+ GGA +TS RGPW+MVL+V+GF
Sbjct: 13 FFGVYLLYCLNPRYRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVHGF 72
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P+ ++ALRFEWAWQHP SRRL HV + ET + + LR+L ML+ PW RLPLT++W
Sbjct: 73 PSAVAALRFEWAWQHPHASRRLAHVGPRLRGETAFAFHLRVLAHMLRAPPWARLPLTLRW 132
Query: 123 LKPEYQQVLT 132
L+P+ +Q L
Sbjct: 133 LRPDLRQDLC 142
>gi|296219888|ref|XP_002756076.1| PREDICTED: structure-specific endonuclease subunit SLX1 [Callithrix
jacchus]
Length = 274
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 76/130 (58%), Positives = 100/130 (76%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY NPR+ GR Y+G+TV+P RR++QHN G+ GGA +TS RGPW+MVL+V+GF
Sbjct: 13 FFGVYLLYCLNPRHRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVHGF 72
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P+ ++ALRFEWAWQHP SRRL HV + ET +T+ LR+L ML+ PW RLPLT++W
Sbjct: 73 PSAVAALRFEWAWQHPHASRRLAHVGPRLRGETAFTFHLRVLAHMLRAPPWARLPLTLRW 132
Query: 123 LKPEYQQVLT 132
L+P+ +Q L
Sbjct: 133 LRPDLRQDLC 142
>gi|380791843|gb|AFE67797.1| structure-specific endonuclease subunit SLX1 isoform 1, partial
[Macaca mulatta]
Length = 142
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 76/130 (58%), Positives = 99/130 (76%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY NPRY GR Y+G+TV+P RR++QHN G+ GGA +TS RGPW+MVL+V+GF
Sbjct: 13 FFGVYLLYCLNPRYRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVHGF 72
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P+ ++ALRFEWAWQHP SRRL HV + ET + + LR+L ML+ PW RLPLT++W
Sbjct: 73 PSAVAALRFEWAWQHPHASRRLAHVGPRLRGETAFAFHLRVLAHMLRAPPWARLPLTLRW 132
Query: 123 LKPEYQQVLT 132
L+P+ +Q L
Sbjct: 133 LRPDLRQDLC 142
>gi|302565140|ref|NP_001181378.1| structure-specific endonuclease subunit SLX1 [Macaca mulatta]
gi|383408567|gb|AFH27497.1| structure-specific endonuclease subunit SLX1 isoform 1 [Macaca
mulatta]
gi|387540494|gb|AFJ70874.1| structure-specific endonuclease subunit SLX1 isoform 1 [Macaca
mulatta]
Length = 275
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 76/130 (58%), Positives = 99/130 (76%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY NPRY GR Y+G+TV+P RR++QHN G+ GGA +TS RGPW+MVL+V+GF
Sbjct: 13 FFGVYLLYCLNPRYRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVHGF 72
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P+ ++ALRFEWAWQHP SRRL HV + ET + + LR+L ML+ PW RLPLT++W
Sbjct: 73 PSAVAALRFEWAWQHPHASRRLAHVGPRLRGETAFAFHLRVLAHMLRAPPWARLPLTLRW 132
Query: 123 LKPEYQQVLT 132
L+P+ +Q L
Sbjct: 133 LRPDLRQDLC 142
>gi|156359771|ref|XP_001624938.1| predicted protein [Nematostella vectensis]
gi|259511405|sp|A7STV9.1|SLX1_NEMVE RecName: Full=Structure-specific endonuclease subunit SLX1 homolog
gi|156211746|gb|EDO32838.1| predicted protein [Nematostella vectensis]
Length = 270
Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/127 (61%), Positives = 98/127 (77%), Gaps = 1/127 (0%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
FHGVYLLY NP++ G TYIGYTV+P+RRIKQHN G D GGA+KTS + PW+M+LIV+GF
Sbjct: 10 FHGVYLLYCVNPKFKGHTYIGYTVNPNRRIKQHNGGVDKGGAYKTSRKKPWNMILIVHGF 69
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVA-RKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQ 121
PNDI AL+FEWAWQ P +SRRL+ A +KK +E YC R+L +L+ PW RLPL ++
Sbjct: 70 PNDIIALQFEWAWQKPTVSRRLKSAATKKKPRERPVQYCFRILSELLRVGPWNRLPLHIR 129
Query: 122 WLKPEYQ 128
WL EY+
Sbjct: 130 WLMREYE 136
>gi|344294531|ref|XP_003418970.1| PREDICTED: structure-specific endonuclease subunit SLX1-like
[Loxodonta africana]
Length = 270
Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 100/130 (76%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY NPR+ GR Y+G+TV+P RR++QHN G+ GGA +TS RGPW+MVL+V+GF
Sbjct: 13 FFGVYLLYCLNPRHRGRVYVGFTVNPARRVQQHNGGRRKGGAWRTSGRGPWEMVLVVHGF 72
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P+ +++LRFEWAWQHP SRRL HV ++ E ++ + LR+L MLQ PW RLPLTV+W
Sbjct: 73 PSAVASLRFEWAWQHPHASRRLAHVGQRARGEASFAFHLRVLAHMLQVPPWARLPLTVRW 132
Query: 123 LKPEYQQVLT 132
L+ +++Q L
Sbjct: 133 LRADFRQDLC 142
>gi|410906777|ref|XP_003966868.1| PREDICTED: structure-specific endonuclease subunit slx1-like
[Takifugu rubripes]
Length = 272
Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 74/125 (59%), Positives = 96/125 (76%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVY+LY NP+Y GR YIG+TV+P+RRIKQHN G+ GGA +TS RGPW+M+LI++GF
Sbjct: 8 FFGVYMLYCTNPKYKGRIYIGFTVNPERRIKQHNAGRHKGGAKRTSGRGPWEMLLIIHGF 67
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P+DI+ALRFEWAWQHP SR L HV ++ KE++ + R++ ML APW R PLT +W
Sbjct: 68 PSDIAALRFEWAWQHPHSSRHLSHVCKRSRKESSLQFHWRVVSNMLLVAPWNRQPLTTRW 127
Query: 123 LKPEY 127
LK E+
Sbjct: 128 LKQEF 132
>gi|357631609|gb|EHJ79078.1| putative GIY-YIG domain containing 2 [Danaus plexippus]
Length = 329
Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 79/133 (59%), Positives = 102/133 (76%), Gaps = 2/133 (1%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+GVYLLY NP+Y GRTYIGYT DP+RRI QHN+G GGAH+TS RGPW MV+IV+GF
Sbjct: 10 FYGVYLLYCINPKYKGRTYIGYTRDPNRRIIQHNRGTWAGGAHRTSKRGPWKMVMIVHGF 69
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKS--KETTYTYCLRLLHIMLQTAPWQRLPLTV 120
PN+ISALRFEWAWQ+P + RLQH+ K+ KET + + LR+L ML+ PW RLPL +
Sbjct: 70 PNNISALRFEWAWQNPGKTTRLQHLGLFKNGRKETVFQFKLRVLSEMLRVGPWCRLPLVI 129
Query: 121 QWLKPEYQQVLTE 133
+WL+ ++++ E
Sbjct: 130 RWLENDFREEFPE 142
>gi|444725832|gb|ELW66386.1| Structure-specific endonuclease subunit SLX1 [Tupaia chinensis]
Length = 204
Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 100/130 (76%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY NPR+ GR Y+G+TV+P RR++QHN G+ GGA +TS RGPW+MVLIV+GF
Sbjct: 13 FFGVYLLYCLNPRHRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGRGPWEMVLIVHGF 72
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P+ ++ALRFEWAWQHP+ SRRL HV R+ E + + LR+L ML+T PW RLPLT++W
Sbjct: 73 PSAVAALRFEWAWQHPQASRRLAHVGRRVRGEAAFAFHLRVLAHMLRTLPWARLPLTLRW 132
Query: 123 LKPEYQQVLT 132
L+ ++ L+
Sbjct: 133 LRQDFHCDLS 142
>gi|73958514|ref|XP_849594.1| PREDICTED: structure-specific endonuclease subunit SLX1 isoform 1
[Canis lupus familiaris]
Length = 272
Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 99/130 (76%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY NPR+ GR Y+G+TV+P RR++QHN G+ GGA +TS RGPW+MVLIV+GF
Sbjct: 13 FFGVYLLYCLNPRHRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGRGPWEMVLIVHGF 72
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P+ ++ALRFEWAWQHP+ SRRL HV + E + + LR+L ML+ PW RLPLTV+W
Sbjct: 73 PSAVAALRFEWAWQHPRASRRLAHVGPRLRSEAAFAFHLRVLAHMLRAPPWARLPLTVRW 132
Query: 123 LKPEYQQVLT 132
L+ ++++ L
Sbjct: 133 LRADFRRELC 142
>gi|395846431|ref|XP_003795908.1| PREDICTED: structure-specific endonuclease subunit SLX1 [Otolemur
garnettii]
Length = 274
Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 72/127 (56%), Positives = 103/127 (81%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVY+LY NP++LGR Y+G+TV+P RR++QHN G+ GGA +TS GPW+MVL+V+GF
Sbjct: 13 FFGVYVLYCLNPQHLGRIYVGFTVNPVRRVQQHNGGRKKGGAWRTSGLGPWEMVLVVHGF 72
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P+ ++ALRFEWAWQHP SRRL HV+R+ +E+++ + LR+L ML+ PW RLPLTV+W
Sbjct: 73 PSAVAALRFEWAWQHPHASRRLAHVSRRLRRESSFVFHLRVLAHMLRAPPWARLPLTVRW 132
Query: 123 LKPEYQQ 129
L+P++++
Sbjct: 133 LRPDFRR 139
>gi|256090806|ref|XP_002581372.1| hypothetical protein [Schistosoma mansoni]
gi|360042988|emb|CCD78399.1| hypothetical protein Smp_106040 [Schistosoma mansoni]
Length = 225
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/132 (58%), Positives = 102/132 (77%), Gaps = 1/132 (0%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+G Y+L S NP++ G+TYIG+TV+P RRI+QHN G GGA T+ +GPW+MVLIVYGF
Sbjct: 21 FYGCYILLSLNPKFRGKTYIGFTVNPKRRIRQHNAGCLKGGAKSTAGKGPWEMVLIVYGF 80
Query: 63 PNDISALRFEWAWQHPKMSRRLQ-HVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQ 121
N ISALRFEWAWQ+P +SRRL+ + +KS+ET++ Y LR+L +ML T PW RL LT+Q
Sbjct: 81 SNAISALRFEWAWQNPNLSRRLKDSLPVRKSRETSFDYRLRVLALMLCTGPWNRLGLTIQ 140
Query: 122 WLKPEYQQVLTE 133
W+K Y + L+E
Sbjct: 141 WIKQSYARNLSE 152
>gi|426381833|ref|XP_004057537.1| PREDICTED: structure-specific endonuclease subunit SLX1-like
isoform 1 [Gorilla gorilla gorilla]
Length = 354
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 98/130 (75%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY NPRY GR Y+G+TV+ RR++QHN G+ GGA +TS RGPW+MVL+V+GF
Sbjct: 92 FFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVHGF 151
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P+ ++ALRFEWAWQHP SRRL HV + ET + + LR+L ML+ PW RLPLT++W
Sbjct: 152 PSSVAALRFEWAWQHPHASRRLAHVGPRLRGETAFAFHLRVLAYMLRAPPWARLPLTLRW 211
Query: 123 LKPEYQQVLT 132
++P+ +Q L
Sbjct: 212 VRPDLRQDLC 221
>gi|410209510|gb|JAA01974.1| GIY-YIG domain containing 2 [Pan troglodytes]
gi|410255032|gb|JAA15483.1| GIY-YIG domain containing 2 [Pan troglodytes]
gi|410329011|gb|JAA33452.1| GIY-YIG domain containing 2 [Pan troglodytes]
Length = 354
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 98/130 (75%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY NPRY GR Y+G+TV+ RR++QHN G+ GGA +TS RGPW+MVL+V+GF
Sbjct: 92 FFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVHGF 151
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P+ ++ALRFEWAWQHP SRRL HV + ET + + LR+L ML+ PW RLPLT++W
Sbjct: 152 PSSVAALRFEWAWQHPHASRRLAHVGPRLRGETAFAFHLRVLAHMLRAPPWARLPLTLRW 211
Query: 123 LKPEYQQVLT 132
++P+ +Q L
Sbjct: 212 VRPDLRQDLC 221
>gi|410173179|ref|XP_003960688.1| PREDICTED: structure-specific endonuclease subunit SLX1-like
isoform 1 [Homo sapiens]
Length = 354
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 98/130 (75%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY NPRY GR Y+G+TV+ RR++QHN G+ GGA +TS RGPW+MVL+V+GF
Sbjct: 92 FFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVHGF 151
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P+ ++ALRFEWAWQHP SRRL HV + ET + + LR+L ML+ PW RLPLT++W
Sbjct: 152 PSSVAALRFEWAWQHPHASRRLAHVGPRLRGETAFAFHLRVLAHMLRAPPWARLPLTLRW 211
Query: 123 LKPEYQQVLT 132
++P+ +Q L
Sbjct: 212 VRPDLRQDLC 221
>gi|397475972|ref|XP_003809386.1| PREDICTED: structure-specific endonuclease subunit SLX1 [Pan
paniscus]
gi|410292034|gb|JAA24617.1| GIY-YIG domain containing 2 [Pan troglodytes]
Length = 275
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 98/130 (75%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY NPRY GR Y+G+TV+ RR++QHN G+ GGA +TS RGPW+MVL+V+GF
Sbjct: 13 FFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVHGF 72
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P+ ++ALRFEWAWQHP SRRL HV + ET + + LR+L ML+ PW RLPLT++W
Sbjct: 73 PSSVAALRFEWAWQHPHASRRLAHVGPRLRGETAFAFHLRVLAHMLRAPPWARLPLTLRW 132
Query: 123 LKPEYQQVLT 132
++P+ +Q L
Sbjct: 133 VRPDLRQDLC 142
>gi|226468358|emb|CAX69856.1| Structure-specific endonuclease SLX1 [Schistosoma japonicum]
Length = 279
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 101/132 (76%), Gaps = 1/132 (0%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+G Y+L S NP + GRTYIG+TV+P RRI+QHN G GGA T+ +GPW+MVLIV+GF
Sbjct: 21 FYGCYILLSLNPNFRGRTYIGFTVNPKRRIRQHNAGFLKGGAKSTAGKGPWEMVLIVHGF 80
Query: 63 PNDISALRFEWAWQHPKMSRRLQ-HVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQ 121
PN ISALRFEWAWQ+PK SRRL+ + KK++ET++ Y LR+L +ML T PW RL L +Q
Sbjct: 81 PNAISALRFEWAWQNPKSSRRLKDSLPVKKTRETSFDYRLRVLTLMLCTGPWNRLGLIIQ 140
Query: 122 WLKPEYQQVLTE 133
W+K Y + L+E
Sbjct: 141 WIKQSYARNLSE 152
>gi|13129004|ref|NP_076949.1| structure-specific endonuclease subunit SLX1 isoform 1 [Homo
sapiens]
gi|62868208|ref|NP_001014999.1| structure-specific endonuclease subunit SLX1 isoform 1 [Homo
sapiens]
gi|74732820|sp|Q9BQ83.1|SLX1_HUMAN RecName: Full=Structure-specific endonuclease subunit SLX1;
AltName: Full=GIY-YIG domain-containing protein 1
gi|12653921|gb|AAH00754.1| GIY-YIG domain containing 2 [Homo sapiens]
gi|12654007|gb|AAH00803.1| GIY-YIG domain containing 2 [Homo sapiens]
gi|16359045|gb|AAH15990.1| GIY-YIG domain containing 2 [Homo sapiens]
gi|17939502|gb|AAH19306.1| GIY-YIG domain containing 2 [Homo sapiens]
Length = 275
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 98/130 (75%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY NPRY GR Y+G+TV+ RR++QHN G+ GGA +TS RGPW+MVL+V+GF
Sbjct: 13 FFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVHGF 72
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P+ ++ALRFEWAWQHP SRRL HV + ET + + LR+L ML+ PW RLPLT++W
Sbjct: 73 PSSVAALRFEWAWQHPHASRRLAHVGPRLRGETAFAFHLRVLAHMLRAPPWARLPLTLRW 132
Query: 123 LKPEYQQVLT 132
++P+ +Q L
Sbjct: 133 VRPDLRQDLC 142
>gi|226468360|emb|CAX69857.1| Structure-specific endonuclease SLX1 [Schistosoma japonicum]
Length = 278
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 100/132 (75%), Gaps = 1/132 (0%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+G Y+L S NP + GRTYIG+TV+P RRI+QHN G GGA T+ +GPW+MVLIV+GF
Sbjct: 20 FYGCYILLSLNPNFRGRTYIGFTVNPKRRIRQHNAGFLKGGAKSTAGKGPWEMVLIVHGF 79
Query: 63 PNDISALRFEWAWQHPKMSRRLQ-HVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQ 121
PN ISALRFEWAWQ+PK SRRL+ + KK +ET++ Y LR+L +ML T PW RL L +Q
Sbjct: 80 PNAISALRFEWAWQNPKSSRRLKDSLPVKKPRETSFDYRLRVLTLMLCTGPWNRLGLIIQ 139
Query: 122 WLKPEYQQVLTE 133
W+K Y + L+E
Sbjct: 140 WIKQSYARNLSE 151
>gi|149725872|ref|XP_001496640.1| PREDICTED: structure-specific endonuclease subunit SLX1-like,
partial [Equus caballus]
Length = 274
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 74/131 (56%), Positives = 98/131 (74%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYG 61
F GVYLLY NPR+ GR Y+G+TV+P RR++QHN G+ GGA +TS RGPW+MVLIV+G
Sbjct: 12 CFFGVYLLYCLNPRHPGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGRGPWEMVLIVHG 71
Query: 62 FPNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQ 121
FP+ ++ALRFEWAWQHP SRRL HV + E + + LR+L ML+ PW RLPLTV+
Sbjct: 72 FPSAVAALRFEWAWQHPHASRRLAHVGPRLRGEAAFAFHLRVLAHMLRAPPWARLPLTVR 131
Query: 122 WLKPEYQQVLT 132
WL+ ++++ L
Sbjct: 132 WLRADFRRDLC 142
>gi|403273971|ref|XP_003928768.1| PREDICTED: structure-specific endonuclease subunit SLX1-like
[Saimiri boliviensis boliviensis]
gi|403277027|ref|XP_003930180.1| PREDICTED: structure-specific endonuclease subunit SLX1 [Saimiri
boliviensis boliviensis]
Length = 275
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 99/130 (76%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY NPR+ GR Y+G+TV+P RR++QHN G+ GGA +TS RGPW+MVL+V+GF
Sbjct: 13 FFGVYLLYCLNPRHRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVHGF 72
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
+ ++ALRFEWAWQHP SRRL HV + ET +T+ LR+L ML+ PW RLPLT++W
Sbjct: 73 LSAVAALRFEWAWQHPHASRRLAHVGPRLRGETAFTFHLRVLAHMLRAPPWARLPLTLRW 132
Query: 123 LKPEYQQVLT 132
L+P+ +Q L
Sbjct: 133 LRPDLRQDLC 142
>gi|410984910|ref|XP_003998768.1| PREDICTED: structure-specific endonuclease subunit SLX1 isoform 1
[Felis catus]
Length = 274
Score = 164 bits (416), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 97/130 (74%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY NPR+ GR Y+G+TV+P RR++QHN G+ GGA +TS RGPW MVLIV+GF
Sbjct: 13 FFGVYLLYCLNPRHRGRVYVGFTVNPTRRVQQHNGGRKKGGAWRTSGRGPWAMVLIVHGF 72
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P+ ++ALRFEWAWQHP+ SRRL HV + E + + LR+L ML+ PW RLPLTV+W
Sbjct: 73 PSAVAALRFEWAWQHPQASRRLAHVGPRLRSEAAFAFHLRVLAHMLRVPPWVRLPLTVRW 132
Query: 123 LKPEYQQVLT 132
L+ +++ L
Sbjct: 133 LRADFRCDLC 142
>gi|431906801|gb|ELK10922.1| Structure-specific endonuclease subunit SLX1 [Pteropus alecto]
Length = 270
Score = 164 bits (416), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 97/130 (74%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY NPR GR Y+G+TV+P RR++QHN G+ GGA +TS RGPW+MVLIV+GF
Sbjct: 13 FFGVYLLYCLNPRNRGRVYVGFTVNPTRRVQQHNGGRKKGGAWRTSGRGPWEMVLIVHGF 72
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P+ ++ALRFEWAWQHP SRRL HVA + +E + + LR+L ML+ PW RLPLT++W
Sbjct: 73 PSAVAALRFEWAWQHPHASRRLAHVAPRLRREAAFAFHLRVLAHMLRVPPWARLPLTLRW 132
Query: 123 LKPEYQQVLT 132
L +++ L
Sbjct: 133 LHADFRCELC 142
>gi|324504748|gb|ADY42047.1| Structure-specific endonuclease subunit SLX1 [Ascaris suum]
Length = 433
Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 74/126 (58%), Positives = 94/126 (74%), Gaps = 3/126 (2%)
Query: 3 FHGVYLLYSR--NPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F+GVY L SR N + R YIGYTVDP+RRI+QHN GK FGGA +T +RGPWDMV I++
Sbjct: 165 FYGVYCLISRSANKYFKNRCYIGYTVDPNRRIRQHNAGKQFGGAGRTDHRGPWDMVCIIH 224
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQHVA-RKKSKETTYTYCLRLLHIMLQTAPWQRLPLT 119
GFPN +SALRFEWAWQ+P SRRL+ + +KK KE+ + + LR+ ML + PW+RL LT
Sbjct: 225 GFPNSVSALRFEWAWQNPDKSRRLRCLGLKKKQKESAFAFRLRIACHMLNSDPWRRLSLT 284
Query: 120 VQWLKP 125
+WL P
Sbjct: 285 FRWLLP 290
>gi|195389759|ref|XP_002053541.1| GJ23950 [Drosophila virilis]
gi|194151627|gb|EDW67061.1| GJ23950 [Drosophila virilis]
Length = 303
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 75/135 (55%), Positives = 101/135 (74%), Gaps = 5/135 (3%)
Query: 3 FHGVYLLYSRNP--RYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F+GVYLL S++P RY G+ Y+G+TV+P RRIKQHN+G DFGGA KTS +GPW MVLIV+
Sbjct: 13 FYGVYLLCSQSPDARYRGKCYVGFTVNPKRRIKQHNRGCDFGGARKTSKKGPWQMVLIVH 72
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQ---HVARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFPN+I AL+FEWAWQ P +S RL+ + RK +E+ + Y R+L+ ML PW RLP
Sbjct: 73 GFPNNIVALQFEWAWQQPMLSTRLKMYPELKRKLHRESHFDYNFRILNRMLGVGPWHRLP 132
Query: 118 LTVQWLKPEYQQVLT 132
LT++WL+ +Y++
Sbjct: 133 LTIRWLEADYERAFV 147
>gi|225718864|gb|ACO15278.1| Structure-specific endonuclease SLX1 [Caligus clemensi]
Length = 259
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 74/123 (60%), Positives = 90/123 (73%), Gaps = 1/123 (0%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F G YLL NP+Y GR Y+G+TVDP RR+KQHN G FGGA +TS +GPW MVL+V GF
Sbjct: 10 FFGCYLLICENPKYKGRMYVGFTVDPVRRLKQHNAGAAFGGARRTSAKGPWSMVLLVQGF 69
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKS-KETTYTYCLRLLHIMLQTAPWQRLPLTVQ 121
PN ISALRFEWAWQHP SRRL V K+ +E + Y +R++ ML T PW RLPLT++
Sbjct: 70 PNQISALRFEWAWQHPSRSRRLSSVIPSKAPREKSLNYHVRVVATMLLTPPWSRLPLTLR 129
Query: 122 WLK 124
WL+
Sbjct: 130 WLR 132
>gi|339241841|ref|XP_003376846.1| GIY-YIG domain-containing protein 1 [Trichinella spiralis]
gi|316974418|gb|EFV57909.1| GIY-YIG domain-containing protein 1 [Trichinella spiralis]
Length = 227
Score = 161 bits (407), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 75/132 (56%), Positives = 101/132 (76%), Gaps = 3/132 (2%)
Query: 3 FHGVYLLYSRN--PRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F+G YLL S + P Y G+ Y+G+TV+P+RRIKQHN+G +GGA +TSNRGPW+MVL+V+
Sbjct: 47 FYGCYLLVSESEKPLYRGKCYVGFTVNPERRIKQHNRGSRYGGAWRTSNRGPWEMVLVVH 106
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQHVA-RKKSKETTYTYCLRLLHIMLQTAPWQRLPLT 119
GFPN+I ALRFEWAWQHP SRRL+ + RK+ KE+ + +++L ML PW RLPLT
Sbjct: 107 GFPNEICALRFEWAWQHPDRSRRLRVLKLRKRQKESALDHHIKILCHMLNVGPWNRLPLT 166
Query: 120 VQWLKPEYQQVL 131
V+WL +Y+ +L
Sbjct: 167 VRWLCEKYETML 178
>gi|198453592|ref|XP_002137705.1| GA27368 [Drosophila pseudoobscura pseudoobscura]
gi|259511400|sp|B5DXG8.1|SLX1_DROPS RecName: Full=Structure-specific endonuclease subunit SLX1 homolog
gi|198132426|gb|EDY68263.1| GA27368 [Drosophila pseudoobscura pseudoobscura]
Length = 291
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/134 (55%), Positives = 100/134 (74%), Gaps = 5/134 (3%)
Query: 3 FHGVYLLYSR--NPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F+GVYLL S+ + RY + Y+G+TV+P RRIKQHN+G DFGGA KTS +GPW MV+IV+
Sbjct: 16 FYGVYLLCSQSLDSRYRAKCYVGFTVNPKRRIKQHNRGCDFGGAKKTSKKGPWQMVMIVH 75
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQ---HVARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFPN+ISAL+FEWAWQ P +S RL+ + RKK KET + Y R+L+ ML PW RL
Sbjct: 76 GFPNNISALQFEWAWQQPTLSTRLKIFPDLKRKKPKETHFDYNFRILNRMLSVGPWHRLA 135
Query: 118 LTVQWLKPEYQQVL 131
LT++WL+ +Y++
Sbjct: 136 LTIRWLETDYERAF 149
>gi|195038477|ref|XP_001990683.1| GH19497 [Drosophila grimshawi]
gi|259511445|sp|B4JGW7.1|SLX1_DROGR RecName: Full=Structure-specific endonuclease subunit SLX1 homolog
gi|193894879|gb|EDV93745.1| GH19497 [Drosophila grimshawi]
Length = 286
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/132 (56%), Positives = 101/132 (76%), Gaps = 5/132 (3%)
Query: 3 FHGVYLLYSR--NPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F+GVYLL S+ + RY G+ Y+G+TV+P RRI QHN+G DFGGAHKTS +GPW MV+IV+
Sbjct: 17 FYGVYLLCSQSLDARYRGKCYVGFTVNPKRRIGQHNRGCDFGGAHKTSRKGPWQMVMIVH 76
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQ---HVARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFPN+I+AL+FEWAWQ P +S RL+ + RK+ +ET + Y R+++ ML PW RLP
Sbjct: 77 GFPNNIAALQFEWAWQQPALSTRLKCYPELRRKQPRETHFDYNFRIVNRMLGIGPWHRLP 136
Query: 118 LTVQWLKPEYQQ 129
LTV+WL+ E ++
Sbjct: 137 LTVRWLESECER 148
>gi|170587436|ref|XP_001898482.1| GIY-YIG catalytic domain containing protein [Brugia malayi]
gi|259511396|sp|A8PV03.1|SLX1_BRUMA RecName: Full=Structure-specific endonuclease subunit SLX1 homolog
gi|158594106|gb|EDP32696.1| GIY-YIG catalytic domain containing protein [Brugia malayi]
Length = 333
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/129 (58%), Positives = 99/129 (76%), Gaps = 3/129 (2%)
Query: 3 FHGVYLLYSRNP-RYL-GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F GVY L SR+P RY R YIGYTV+P+RRI+QHN GK+FGGA KT +RGPWDMV I++
Sbjct: 69 FFGVYCLLSRSPNRYFKNRCYIGYTVNPNRRIRQHNAGKEFGGAKKTDHRGPWDMVCIIH 128
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQHVA-RKKSKETTYTYCLRLLHIMLQTAPWQRLPLT 119
GFPN +SALRFEWAWQ+P+ SRRL+ + +K++ ET + + LR+ ML + PW+RL LT
Sbjct: 129 GFPNSVSALRFEWAWQNPEKSRRLRLLNLKKRTSETAFGFRLRIACHMLNSDPWRRLSLT 188
Query: 120 VQWLKPEYQ 128
+WL PE +
Sbjct: 189 FRWLLPELE 197
>gi|221090562|ref|XP_002170246.1| PREDICTED: structure-specific endonuclease subunit slx1-like [Hydra
magnipapillata]
Length = 302
Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 68/125 (54%), Positives = 93/125 (74%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+GVY+LY+ NP+Y G YIG+TV+P+RRI+QHN+ G +NRGPWDMVLI++GF
Sbjct: 15 FYGVYILYNINPKYKGSVYIGFTVNPERRIRQHNREIKGGALKTGNNRGPWDMVLIIHGF 74
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
+AL+FEWAWQ+PK+S+RL H+A K E+ + Y +R+L M PW+RLPLT+QW
Sbjct: 75 RTRCAALQFEWAWQNPKISKRLSHLANKARNESVFAYKIRILSEMFNVGPWKRLPLTIQW 134
Query: 123 LKPEY 127
LK +Y
Sbjct: 135 LKQDY 139
>gi|195152203|ref|XP_002017026.1| GL22073 [Drosophila persimilis]
gi|259511399|sp|B4GEU1.1|SLX1_DROPE RecName: Full=Structure-specific endonuclease subunit SLX1 homolog
gi|194112083|gb|EDW34126.1| GL22073 [Drosophila persimilis]
Length = 291
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/134 (55%), Positives = 100/134 (74%), Gaps = 5/134 (3%)
Query: 3 FHGVYLLYSR--NPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F+GVYLL S+ + RY + Y+G+TV+P RRIKQHN+G DFGGA KTS +GPW MV+IV+
Sbjct: 16 FYGVYLLCSQSLDSRYRAKCYVGFTVNPKRRIKQHNRGCDFGGAKKTSKKGPWQMVMIVH 75
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQ---HVARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFPN+ISAL+FEWAWQ P +S RL+ + RKK KET + Y R+L+ ML PW RL
Sbjct: 76 GFPNNISALQFEWAWQQPTLSTRLKIFPDLKRKKPKETHFDYNFRILNRMLGVGPWHRLA 135
Query: 118 LTVQWLKPEYQQVL 131
LT++WL+ +Y++
Sbjct: 136 LTIRWLETDYERAF 149
>gi|10440128|dbj|BAB15654.1| unnamed protein product [Homo sapiens]
Length = 255
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/130 (56%), Positives = 97/130 (74%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY NPRY GR Y+G+TV+ RR++QHN G+ GGA +TS RGP +MVL+V+GF
Sbjct: 13 FFGVYLLYWLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGRGPREMVLVVHGF 72
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P+ ++ALRFEWAWQHP SRRL HV + ET + + LR+L ML+ PW RLPLT++W
Sbjct: 73 PSSVAALRFEWAWQHPHASRRLAHVGPRLRGETAFAFHLRVLAHMLRAPPWARLPLTLRW 132
Query: 123 LKPEYQQVLT 132
++P+ +Q L
Sbjct: 133 VRPDLRQDLC 142
>gi|313216805|emb|CBY38044.1| unnamed protein product [Oikopleura dioica]
Length = 330
Score = 158 bits (399), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 73/129 (56%), Positives = 92/129 (71%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
HG YLL S NP GRTYIGYTV+P RRI QHN G GGA +T+ +GPW + VYGF
Sbjct: 7 LHGCYLLCSLNPSTKGRTYIGYTVNPQRRIMQHNSGVHKGGAKRTNMKGPWVWTVFVYGF 66
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P++IS LRFEWAWQ+PK SRRL+H+ K+SKE+ Y Y +R++ ML +PW RLPL V W
Sbjct: 67 PSEISGLRFEWAWQNPKSSRRLKHLPAKRSKESQYDYRIRIMSHMLHISPWTRLPLNVCW 126
Query: 123 LKPEYQQVL 131
+Y++ L
Sbjct: 127 FIEKYKRSL 135
>gi|358340281|dbj|GAA28933.2| structure-specific endonuclease subunit SLX1 [Clonorchis sinensis]
Length = 279
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/140 (55%), Positives = 97/140 (69%), Gaps = 14/140 (10%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYG 61
F G Y+L S NP GRTYIG+TV+P+RRI+QHN G+ GGA T+ RGPWDMVLIV+G
Sbjct: 20 CFFGCYILVSLNPTARGRTYIGFTVNPNRRIRQHNGGRIKGGAKSTAGRGPWDMVLIVHG 79
Query: 62 FPNDISALR-------------FEWAWQHPKMSRRLQH-VARKKSKETTYTYCLRLLHIM 107
FPNDISALR FEWAWQ+P MSRRL H V+ ++ KE+ + Y LR+L++M
Sbjct: 80 FPNDISALRVRVALYDFLFFLQFEWAWQNPNMSRRLAHLVSPRRPKESPFDYRLRVLNVM 139
Query: 108 LQTAPWQRLPLTVQWLKPEY 127
L + PW RL L V+W+ Y
Sbjct: 140 LSSGPWNRLGLIVRWINQRY 159
>gi|115646308|gb|ABJ17012.1| IP09950p [Drosophila melanogaster]
Length = 304
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/136 (54%), Positives = 100/136 (73%), Gaps = 5/136 (3%)
Query: 3 FHGVYLLYSR--NPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F+GVYLL S+ +PRY G+ Y+G+TV+P RRI+QHN G DFGGA KTS +GPW MV+IV+
Sbjct: 30 FYGVYLLCSQSLDPRYRGKCYVGFTVNPKRRIRQHNLGCDFGGARKTSRKGPWLMVMIVH 89
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQ---HVARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFPN+ AL+FEWAWQ P +S RL+ + RK +ET + Y R+L ML PW RLP
Sbjct: 90 GFPNNTVALQFEWAWQQPSLSTRLKMYPELKRKLPRETFFDYNFRILSNMLGVGPWNRLP 149
Query: 118 LTVQWLKPEYQQVLTE 133
LTV+WL+ +Y++ ++
Sbjct: 150 LTVRWLETDYERPFSK 165
>gi|281360057|ref|NP_649484.3| nuclease slx1 [Drosophila melanogaster]
gi|259511488|sp|Q9VN41.3|SLX1_DROME RecName: Full=Structure-specific endonuclease subunit SLX1 homolog
gi|272476806|gb|AAF52110.3| nuclease slx1 [Drosophila melanogaster]
Length = 297
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/136 (54%), Positives = 100/136 (73%), Gaps = 5/136 (3%)
Query: 3 FHGVYLLYSR--NPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F+GVYLL S+ +PRY G+ Y+G+TV+P RRI+QHN G DFGGA KTS +GPW MV+IV+
Sbjct: 23 FYGVYLLCSQSLDPRYRGKCYVGFTVNPKRRIRQHNLGCDFGGARKTSRKGPWLMVMIVH 82
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQ---HVARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFPN+ AL+FEWAWQ P +S RL+ + RK +ET + Y R+L ML PW RLP
Sbjct: 83 GFPNNTVALQFEWAWQQPSLSTRLKMYPELKRKLPRETFFDYNFRILSNMLGVGPWNRLP 142
Query: 118 LTVQWLKPEYQQVLTE 133
LTV+WL+ +Y++ ++
Sbjct: 143 LTVRWLETDYERPFSK 158
>gi|195343465|ref|XP_002038318.1| GM10768 [Drosophila sechellia]
gi|194133339|gb|EDW54855.1| GM10768 [Drosophila sechellia]
Length = 308
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/136 (54%), Positives = 100/136 (73%), Gaps = 5/136 (3%)
Query: 3 FHGVYLLYSR--NPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F+GVYLL S+ +PRY G+ Y+G+TV+P RRI+QHN G DFGGA KTS +GPW MV+IV+
Sbjct: 33 FYGVYLLCSQSLDPRYRGKCYVGFTVNPKRRIRQHNLGCDFGGARKTSRKGPWLMVMIVH 92
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQ---HVARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFPN+ AL+FEWAWQ P +S RL+ + RK +ET + Y R+L ML PW RLP
Sbjct: 93 GFPNNTVALQFEWAWQQPSLSTRLKMYPELKRKLPRETFFDYNFRILSHMLGVGPWNRLP 152
Query: 118 LTVQWLKPEYQQVLTE 133
LTV+WL+ +Y++ ++
Sbjct: 153 LTVRWLETDYERPFSK 168
>gi|259511465|sp|B4I3R2.2|SLX1_DROSE RecName: Full=Structure-specific endonuclease subunit SLX1 homolog
Length = 298
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/136 (54%), Positives = 100/136 (73%), Gaps = 5/136 (3%)
Query: 3 FHGVYLLYSR--NPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F+GVYLL S+ +PRY G+ Y+G+TV+P RRI+QHN G DFGGA KTS +GPW MV+IV+
Sbjct: 23 FYGVYLLCSQSLDPRYRGKCYVGFTVNPKRRIRQHNLGCDFGGARKTSRKGPWLMVMIVH 82
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQ---HVARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFPN+ AL+FEWAWQ P +S RL+ + RK +ET + Y R+L ML PW RLP
Sbjct: 83 GFPNNTVALQFEWAWQQPSLSTRLKMYPELKRKLPRETFFDYNFRILSHMLGVGPWNRLP 142
Query: 118 LTVQWLKPEYQQVLTE 133
LTV+WL+ +Y++ ++
Sbjct: 143 LTVRWLETDYERPFSK 158
>gi|402583674|gb|EJW77618.1| hypothetical protein WUBG_11472, partial [Wuchereria bancrofti]
Length = 287
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/129 (57%), Positives = 97/129 (75%), Gaps = 3/129 (2%)
Query: 3 FHGVYLLYSR--NPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F GVY L SR N + R YIGYTV+P+RRI+QHN GK+FGGA KT +RGPWDMV I++
Sbjct: 23 FFGVYCLLSRSSNRYFKNRCYIGYTVNPNRRIRQHNAGKEFGGAKKTDHRGPWDMVCIIH 82
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQHVA-RKKSKETTYTYCLRLLHIMLQTAPWQRLPLT 119
GFPN +SALRFEWAWQ+P+ SRRL+ + +K++ ET + + LR+ ML + PW+RL LT
Sbjct: 83 GFPNSVSALRFEWAWQNPEKSRRLRPLNLKKRTSETAFGFRLRIACHMLNSDPWRRLSLT 142
Query: 120 VQWLKPEYQ 128
+WL PE +
Sbjct: 143 FRWLLPELE 151
>gi|195568245|ref|XP_002102128.1| GD17776 [Drosophila simulans]
gi|194198055|gb|EDX11631.1| GD17776 [Drosophila simulans]
Length = 183
Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/136 (54%), Positives = 100/136 (73%), Gaps = 5/136 (3%)
Query: 3 FHGVYLLYSR--NPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F+GVYLL S+ +PRY G+ Y+G+TV+P RRI+QHN G DFGGA KTS +GPW MV+IV+
Sbjct: 33 FYGVYLLCSQSLDPRYRGKCYVGFTVNPKRRIRQHNLGCDFGGARKTSRKGPWLMVMIVH 92
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQ---HVARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFPN+ AL+FEWAWQ P +S RL+ + RK +ET + Y R+L ML PW RLP
Sbjct: 93 GFPNNTVALQFEWAWQQPSLSTRLKMYPELKRKLPRETFFDYNFRILSHMLGVGPWNRLP 152
Query: 118 LTVQWLKPEYQQVLTE 133
LTV+WL+ +Y++ ++
Sbjct: 153 LTVRWLETDYERPFSK 168
>gi|194898576|ref|XP_001978845.1| GG12527 [Drosophila erecta]
gi|190650548|gb|EDV47803.1| GG12527 [Drosophila erecta]
Length = 304
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 73/132 (55%), Positives = 98/132 (74%), Gaps = 5/132 (3%)
Query: 3 FHGVYLLYSR--NPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F+GVYLL S+ +PR+ G+ Y+G+TV+P RRI+QHN G DFGGA KTS RGPW MV+IV+
Sbjct: 34 FYGVYLLCSQSLDPRFRGKCYVGFTVNPKRRIRQHNLGCDFGGARKTSRRGPWLMVMIVH 93
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQ---HVARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFPN+ AL+FEWAWQ P +S RL+ + RK +ET + Y R+L ML PW RLP
Sbjct: 94 GFPNNTVALQFEWAWQQPSLSTRLKMYPELKRKLPRETFFDYNFRILSHMLGVGPWNRLP 153
Query: 118 LTVQWLKPEYQQ 129
L+V+WL+ +Y++
Sbjct: 154 LSVRWLETDYER 165
>gi|259511466|sp|B3P230.2|SLX1_DROER RecName: Full=Structure-specific endonuclease subunit SLX1 homolog
Length = 294
Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 73/132 (55%), Positives = 98/132 (74%), Gaps = 5/132 (3%)
Query: 3 FHGVYLLYSR--NPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F+GVYLL S+ +PR+ G+ Y+G+TV+P RRI+QHN G DFGGA KTS RGPW MV+IV+
Sbjct: 24 FYGVYLLCSQSLDPRFRGKCYVGFTVNPKRRIRQHNLGCDFGGARKTSRRGPWLMVMIVH 83
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQ---HVARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFPN+ AL+FEWAWQ P +S RL+ + RK +ET + Y R+L ML PW RLP
Sbjct: 84 GFPNNTVALQFEWAWQQPSLSTRLKMYPELKRKLPRETFFDYNFRILSHMLGVGPWNRLP 143
Query: 118 LTVQWLKPEYQQ 129
L+V+WL+ +Y++
Sbjct: 144 LSVRWLETDYER 155
>gi|290562980|gb|ADD38884.1| Structure-specific endonuclease subunit slx1 [Lepeophtheirus
salmonis]
Length = 251
Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 73/125 (58%), Positives = 90/125 (72%), Gaps = 1/125 (0%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F G YLL S NP+Y GR Y+G+TVDP RR+KQHN G FGGA +TS +GPW MVL+V GF
Sbjct: 10 FFGCYLLMSENPKYKGRMYVGFTVDPVRRLKQHNAGSAFGGARRTSAKGPWTMVLLVQGF 69
Query: 63 PNDISALRFEWAWQHP-KMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQ 121
PN ISALRFEWAWQHP + R V K SKE + + +R++ ML PW RLPLT++
Sbjct: 70 PNQISALRFEWAWQHPSRSRRLSSRVTPKTSKEKSLNFHVRVVAEMLLAPPWVRLPLTLR 129
Query: 122 WLKPE 126
WL+P+
Sbjct: 130 WLRPD 134
>gi|380016624|ref|XP_003692278.1| PREDICTED: structure-specific endonuclease subunit SLX1 homolog
isoform 2 [Apis florea]
Length = 149
Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 75/132 (56%), Positives = 98/132 (74%), Gaps = 5/132 (3%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+GVYLLYS NP++ GR YIG+TVDP RR+K+HN GK+ GA KTS++GPW+MVLI++GF
Sbjct: 10 FYGVYLLYSMNPQFKGRIYIGFTVDPCRRLKEHNAGKEHKGARKTSDKGPWNMVLIIHGF 69
Query: 63 PNDISALRFEWAWQHPKMSRRLQHV----ARKK-SKETTYTYCLRLLHIMLQTAPWQRLP 117
N SAL FEWAWQHP SRRL+HV A+KK ++ + L +L ML+ PW RLP
Sbjct: 70 LNKTSALSFEWAWQHPHKSRRLKHVYVSNAKKKLQQKRKIRFHLSVLSEMLKIGPWCRLP 129
Query: 118 LTVQWLKPEYQQ 129
LT++WL E+ +
Sbjct: 130 LTIRWLDYEFYE 141
>gi|380016622|ref|XP_003692277.1| PREDICTED: structure-specific endonuclease subunit SLX1 homolog
isoform 1 [Apis florea]
Length = 260
Score = 154 bits (390), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 74/126 (58%), Positives = 95/126 (75%), Gaps = 5/126 (3%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+GVYLLYS NP++ GR YIG+TVDP RR+K+HN GK+ GA KTS++GPW+MVLI++GF
Sbjct: 10 FYGVYLLYSMNPQFKGRIYIGFTVDPCRRLKEHNAGKEHKGARKTSDKGPWNMVLIIHGF 69
Query: 63 PNDISALRFEWAWQHPKMSRRLQHV----ARKK-SKETTYTYCLRLLHIMLQTAPWQRLP 117
N SAL FEWAWQHP SRRL+HV A+KK ++ + L +L ML+ PW RLP
Sbjct: 70 LNKTSALSFEWAWQHPHKSRRLKHVYVSNAKKKLQQKRKIRFHLSVLSEMLKIGPWCRLP 129
Query: 118 LTVQWL 123
LT++WL
Sbjct: 130 LTIRWL 135
>gi|194744231|ref|XP_001954598.1| GF16665 [Drosophila ananassae]
gi|259511397|sp|B3M0F3.1|SLX1_DROAN RecName: Full=Structure-specific endonuclease subunit SLX1 homolog
gi|190627635|gb|EDV43159.1| GF16665 [Drosophila ananassae]
Length = 299
Score = 154 bits (390), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 71/132 (53%), Positives = 98/132 (74%), Gaps = 5/132 (3%)
Query: 3 FHGVYLLYSR--NPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F+GVYLL S+ + RY G+ Y+G+TV+P RRIKQHN+G DFGGA KTS +GPW MV+IV+
Sbjct: 24 FYGVYLLCSQSLDSRYRGKCYVGFTVNPKRRIKQHNRGCDFGGAKKTSRKGPWQMVMIVH 83
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQ---HVARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFPN+I AL+FEWAWQ P +S RL+ + RK +E+ + Y R+L+ ML PW RL
Sbjct: 84 GFPNNIVALQFEWAWQQPTLSTRLKIFPELKRKNPRESHFDYNFRILNRMLGVGPWNRLA 143
Query: 118 LTVQWLKPEYQQ 129
L ++WL+ +Y++
Sbjct: 144 LKIRWLETDYER 155
>gi|301783965|ref|XP_002927409.1| PREDICTED: LOW QUALITY PROTEIN: structure-specific endonuclease
subunit SLX1-like [Ailuropoda melanoleuca]
Length = 270
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 69/116 (59%), Positives = 87/116 (75%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY NPR+ GR Y+G+TV+P RR++QHN G+ GGA +TS RGPW+MVLIV+GF
Sbjct: 13 FFGVYLLYCLNPRHRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGRGPWEMVLIVHGF 72
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPL 118
P+ ++ALRFEWAWQHP SRRL HV + E + + LR+L ML+ PW RLPL
Sbjct: 73 PSAVAALRFEWAWQHPHASRRLAHVGPRVRSEAAFPFHLRVLAHMLRAPPWARLPL 128
>gi|195107184|ref|XP_001998196.1| GI23768 [Drosophila mojavensis]
gi|259511398|sp|B4KBJ0.1|SLX1_DROMO RecName: Full=Structure-specific endonuclease subunit SLX1 homolog
gi|193914790|gb|EDW13657.1| GI23768 [Drosophila mojavensis]
Length = 303
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 71/132 (53%), Positives = 98/132 (74%), Gaps = 5/132 (3%)
Query: 3 FHGVYLLYSR--NPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F+GVYLL S+ + R+ G+ Y+G+TV+P RRI+QHN+G FGGA KTS +GPW MV+IV+
Sbjct: 21 FYGVYLLCSQSVDVRHRGKCYVGFTVNPKRRIRQHNRGSSFGGAKKTSKKGPWQMVMIVH 80
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQ---HVARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFPN I AL+FEWAWQ P +S RL+ + RK +ET + Y R+++ ML PW RLP
Sbjct: 81 GFPNKIVALQFEWAWQQPTLSTRLKIFDDLRRKLPRETHFDYNFRIVNRMLGVGPWHRLP 140
Query: 118 LTVQWLKPEYQQ 129
LTV+WL+ +Y++
Sbjct: 141 LTVRWLETDYER 152
>gi|76154303|gb|AAX25793.2| SJCHGC08377 protein [Schistosoma japonicum]
Length = 134
Score = 149 bits (375), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/114 (61%), Positives = 89/114 (78%), Gaps = 1/114 (0%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+G Y+L S NP + GRTYIG+TV+P RRI+QHN G GGA T+ +GPW+MVLIV+GF
Sbjct: 21 FYGCYILLSLNPNFRGRTYIGFTVNPKRRIRQHNAGFLKGGAKSTAGKGPWEMVLIVHGF 80
Query: 63 PNDISALRFEWAWQHPKMSRRLQH-VARKKSKETTYTYCLRLLHIMLQTAPWQR 115
PN ISALRFEWAWQ+PK SRRL+ + KK++ET++ Y LR+L +ML T PW R
Sbjct: 81 PNAISALRFEWAWQNPKSSRRLKDSLPVKKTRETSFDYRLRVLTLMLCTGPWNR 134
>gi|340727966|ref|XP_003402304.1| PREDICTED: serine/threonine-protein kinase TAO1-like [Bombus
terrestris]
Length = 1077
Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 89/127 (70%), Gaps = 11/127 (8%)
Query: 6 VYLLYSRNPRYLGR-----TYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
+ LL+ R R L + IG+ R K+HN GK++GGA KTSN+GPW+MVLI++
Sbjct: 834 IRLLHERQERELQQFDEESARIGF------RFKKHNAGKEYGGAWKTSNKGPWNMVLIIH 887
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTV 120
GFPN+ SALRFEWAWQHP +SRRL+HV +KKS++ +C +L ML+ PW RLPLT+
Sbjct: 888 GFPNNTSALRFEWAWQHPHISRRLKHVPKKKSQQKVIEFCFLVLSNMLKVGPWCRLPLTI 947
Query: 121 QWLKPEY 127
+WL E+
Sbjct: 948 RWLDYEF 954
>gi|17507665|ref|NP_491541.1| Protein SLX-1 [Caenorhabditis elegans]
gi|74961592|sp|P91351.1|SLX1_CAEEL RecName: Full=Structure-specific endonuclease subunit SLX1 homolog;
AltName: Full=GIY-YIG domain-containing protein 1
gi|373219195|emb|CCD66429.1| Protein SLX-1 [Caenorhabditis elegans]
Length = 443
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 66/124 (53%), Positives = 89/124 (71%), Gaps = 3/124 (2%)
Query: 3 FHGVYLLYSRNPR--YLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F+GVY L SR+ R Y R YIGYTVDP+RRI QHN G+D GGA KT +RGPWDMV +V+
Sbjct: 172 FYGVYCLISRSDRPCYKNRCYIGYTVDPNRRIMQHNGGRDKGGAKKTDSRGPWDMVCVVH 231
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQHVA-RKKSKETTYTYCLRLLHIMLQTAPWQRLPLT 119
GFPN ++AL FEWAWQ+P +S+ L+ RK+ KET + + LR+ ++ ++ + R LT
Sbjct: 232 GFPNHVAALHFEWAWQNPLVSKSLKEKQLRKERKETPFAFQLRIACELMNSSAFCRFALT 291
Query: 120 VQWL 123
+WL
Sbjct: 292 FRWL 295
>gi|350416470|ref|XP_003490959.1| PREDICTED: serine/threonine-protein kinase TAO1-like [Bombus
impatiens]
Length = 1078
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 88/127 (69%), Gaps = 11/127 (8%)
Query: 6 VYLLYSRNPRYLGR-----TYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
+ LL+ R R L + IG+ R K+HN GK+ GGA KTSN+GPW+MVLI++
Sbjct: 834 IRLLHERQERELQQFDEESARIGF------RFKKHNAGKEHGGAWKTSNKGPWNMVLIIH 887
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTV 120
GFPN+ SALRFEWAWQHP +SRRL+HV +KKS++ +C +L ML+ PW RLPLT+
Sbjct: 888 GFPNNTSALRFEWAWQHPHISRRLKHVPKKKSQQKVIEFCFLVLSNMLKVGPWCRLPLTI 947
Query: 121 QWLKPEY 127
+WL E+
Sbjct: 948 RWLDYEF 954
>gi|259511467|sp|A8WJ66.2|SLX1_CAEBR RecName: Full=Structure-specific endonuclease subunit SLX1 homolog;
AltName: Full=GIY-YIG domain-containing protein 1
Length = 439
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 67/124 (54%), Positives = 87/124 (70%), Gaps = 3/124 (2%)
Query: 3 FHGVYLLYSRNPR--YLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F+GVY L SR+ R Y R YIGYTVDP+RRI QHN G+ GGA KT +RGPWDMV +V+
Sbjct: 167 FYGVYCLISRSERQCYKNRCYIGYTVDPNRRIMQHNGGRFKGGAKKTDSRGPWDMVCVVH 226
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQHVARKKS-KETTYTYCLRLLHIMLQTAPWQRLPLT 119
GFPN ++ALRFEWAWQ+P +S+ L+ KK KET + Y LR+ ++ + + R LT
Sbjct: 227 GFPNHVAALRFEWAWQNPAVSKSLKEKQLKKERKETPFAYQLRIACELMNSEAFSRFALT 286
Query: 120 VQWL 123
+WL
Sbjct: 287 FRWL 290
>gi|308461163|ref|XP_003092877.1| CRE-SLX-1 protein [Caenorhabditis remanei]
gi|308252127|gb|EFO96079.1| CRE-SLX-1 protein [Caenorhabditis remanei]
Length = 416
Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 67/124 (54%), Positives = 87/124 (70%), Gaps = 3/124 (2%)
Query: 3 FHGVYLLYSRNPR--YLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F+GVY L SR+ R Y R YIGYTVDP+RRI QHN G+ GGA KT +RGPWDMV +V+
Sbjct: 153 FYGVYCLISRSDRPCYKNRCYIGYTVDPNRRIMQHNGGRFKGGAKKTDSRGPWDMVCVVH 212
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQHVARKKS-KETTYTYCLRLLHIMLQTAPWQRLPLT 119
GFPN ++ALRFEWAWQ+P +S+ L+ KK KET + Y LR+ ++ + + R LT
Sbjct: 213 GFPNHVAALRFEWAWQNPTVSKTLKEKNLKKERKETPFAYQLRIACQLMNSDTFCRFALT 272
Query: 120 VQWL 123
+WL
Sbjct: 273 FRWL 276
>gi|341894770|gb|EGT50705.1| hypothetical protein CAEBREN_02710 [Caenorhabditis brenneri]
Length = 433
Score = 138 bits (348), Expect = 6e-31, Method: Composition-based stats.
Identities = 67/124 (54%), Positives = 87/124 (70%), Gaps = 3/124 (2%)
Query: 3 FHGVYLLYSRNPR--YLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F+GVY L SR+ R Y R YIGYTVDP+RRI QHN G+ GGA KT +RGPWDMV +V+
Sbjct: 162 FYGVYCLISRSDRPCYKNRCYIGYTVDPNRRIMQHNGGRFKGGAKKTDSRGPWDMVCVVH 221
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQHVARKKS-KETTYTYCLRLLHIMLQTAPWQRLPLT 119
GFPN ++ALRFEWAWQ+P +S+ L+ KK KET + Y LR+ ++ + + R LT
Sbjct: 222 GFPNHVAALRFEWAWQNPAVSKSLKEKQLKKERKETPFAYQLRIACELMNSEAFCRFALT 281
Query: 120 VQWL 123
+WL
Sbjct: 282 FRWL 285
>gi|341898390|gb|EGT54325.1| hypothetical protein CAEBREN_11013 [Caenorhabditis brenneri]
Length = 431
Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats.
Identities = 67/124 (54%), Positives = 87/124 (70%), Gaps = 3/124 (2%)
Query: 3 FHGVYLLYSRNPR--YLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F+GVY L SR+ R Y R YIGYTVDP+RRI QHN G+ GGA KT +RGPWDMV +V+
Sbjct: 160 FYGVYCLISRSDRPCYKNRCYIGYTVDPNRRIMQHNGGRFKGGAKKTDSRGPWDMVCVVH 219
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQHVARKKS-KETTYTYCLRLLHIMLQTAPWQRLPLT 119
GFPN ++ALRFEWAWQ+P +S+ L+ KK KET + Y LR+ ++ + + R LT
Sbjct: 220 GFPNHVAALRFEWAWQNPAVSKSLKEKQLKKERKETPFAYQLRIACELMNSEAFCRFALT 279
Query: 120 VQWL 123
+WL
Sbjct: 280 FRWL 283
>gi|302757311|ref|XP_002962079.1| hypothetical protein SELMODRAFT_66109 [Selaginella moellendorffii]
gi|300170738|gb|EFJ37339.1| hypothetical protein SELMODRAFT_66109 [Selaginella moellendorffii]
Length = 182
Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 85/128 (66%), Gaps = 2/128 (1%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+G YLL S NPR+ G+TYIG+TV+P RRI+QHN G+ GA +T + PW+MVL VYGF
Sbjct: 1 FYGCYLLRSINPRFKGQTYIGFTVNPRRRIRQHN-GEITCGAFRTKKKRPWEMVLCVYGF 59
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKET-TYTYCLRLLHIMLQTAPWQRLPLTVQ 121
+ AL+FEWAWQHPK+S+ + A K K +++LH ML + W R+ LTVQ
Sbjct: 60 SSKTDALQFEWAWQHPKLSKEVVLPAEVKPKNLRGIAGKIKILHAMLCSPKWSRMKLTVQ 119
Query: 122 WLKPEYQQ 129
+ E+ Q
Sbjct: 120 FFSSEHAQ 127
>gi|307104846|gb|EFN53098.1| hypothetical protein CHLNCDRAFT_26241 [Chlorella variabilis]
Length = 208
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 87/128 (67%), Gaps = 3/128 (2%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F G YLL S+NPR GR+Y+G+TV+P RRI+QHN G+ GA KT PW+MVL+V+GF
Sbjct: 4 FFGCYLLESKNPRAKGRSYVGFTVNPRRRIRQHN-GELVNGAAKTKRHRPWEMVLVVFGF 62
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P+ + AL+FEWAWQHP+ S ++ +A + ++ Y + LL ML+ PW PLT+Q+
Sbjct: 63 PSQVQALQFEWAWQHPEKSIEVRGIAARLGRQKRYG--VLLLMEMLRAEPWCYYPLTLQF 120
Query: 123 LKPEYQQV 130
L ++ +
Sbjct: 121 LSSQHSAL 128
>gi|255553347|ref|XP_002517715.1| nuclease, putative [Ricinus communis]
gi|223543113|gb|EEF44647.1| nuclease, putative [Ricinus communis]
Length = 413
Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 56/125 (44%), Positives = 78/125 (62%), Gaps = 1/125 (0%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+ YLL S PR+ G TYIG+TV+P RRI+QHN G+ GA +T R PW+MV +YGF
Sbjct: 27 FYACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHN-GEIRSGAFRTKKRRPWEMVFCIYGF 85
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P ++SAL+FEWAWQHP S ++ A + ++L + ML + WQ L +TV +
Sbjct: 86 PTNVSALQFEWAWQHPMESLAVRQAAATFKSFSGVANKIKLAYTMLNLSAWQSLNITVNY 145
Query: 123 LKPEY 127
+Y
Sbjct: 146 FSTKY 150
>gi|255078336|ref|XP_002502748.1| predicted protein [Micromonas sp. RCC299]
gi|226518014|gb|ACO64006.1| predicted protein [Micromonas sp. RCC299]
Length = 420
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 57/131 (43%), Positives = 83/131 (63%), Gaps = 4/131 (3%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
FH YL+ S +P GR+Y+G+TV+P+RRI+QHN G GA T P +MVL+V+GF
Sbjct: 16 FHACYLVGSLDPARKGRSYVGFTVNPERRIRQHN-GVLAAGARYTRRLRPCEMVLLVHGF 74
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARK---KSKETTYTYCLRLLHIMLQTAPWQRLPLT 119
P+ + AL+FEWAWQ P +SR ++ A + + ++ RL+ ML +PW LPL
Sbjct: 75 PSKVQALQFEWAWQKPALSRAVREAAARLKVSDRSSSLVNKTRLVMAMLHVSPWNNLPLR 134
Query: 120 VQWLKPEYQQV 130
V +L PEY ++
Sbjct: 135 VHFLNPEYAKL 145
>gi|320167053|gb|EFW43952.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 376
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 82/129 (63%), Gaps = 2/129 (1%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+G YLL S NP+Y TYIG+TV+P RR KQHN GK+ GGA T R PW +VL VYGF
Sbjct: 86 FYGCYLLRSLNPKYKNITYIGFTVNPGRRYKQHNSGKEKGGAVFTDRRKPWQLVLCVYGF 145
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
+ SALRFEWAWQHP+ +R L+ + K S T LR+L +L + R PL V W
Sbjct: 146 MDKYSALRFEWAWQHPERTRFLKTLGHKSSMYLTPR--LRVLLDLLAAPAFARTPLCVHW 203
Query: 123 LKPEYQQVL 131
+ + ++L
Sbjct: 204 VNMQAMKLL 212
>gi|303283126|ref|XP_003060854.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457205|gb|EEH54504.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 147
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 87/131 (66%), Gaps = 4/131 (3%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F G YLL S NP GR+Y+G+TV+P RRI+QHN G GA KT P +M+++V+GF
Sbjct: 1 FFGCYLLASLNPAMKGRSYVGFTVNPPRRIRQHN-GALSAGAKKTRKLRPCEMLVVVHGF 59
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARK---KSKETTYTYCLRLLHIMLQTAPWQRLPLT 119
+D+ AL+FEWAWQ+P+ S +++ A + + ++ ++LL ML +PW+ LPLT
Sbjct: 60 LSDVQALQFEWAWQNPRTSAKVRATATRLKISDRSSSPANKIKLLMGMLHLSPWRHLPLT 119
Query: 120 VQWLKPEYQQV 130
V WL PE++ +
Sbjct: 120 VHWLSPEHRAM 130
>gi|42569467|ref|NP_180594.2| GIY-YIG catalytic domain-containing protein [Arabidopsis thaliana]
gi|51968920|dbj|BAD43152.1| hypothetical protein [Arabidopsis thaliana]
gi|51968928|dbj|BAD43156.1| hypothetical protein [Arabidopsis thaliana]
gi|51971411|dbj|BAD44370.1| hypothetical protein [Arabidopsis thaliana]
gi|66792676|gb|AAY56440.1| At2g30350 [Arabidopsis thaliana]
gi|330253280|gb|AEC08374.1| GIY-YIG catalytic domain-containing protein [Arabidopsis thaliana]
Length = 368
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 80/125 (64%), Gaps = 1/125 (0%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F YLL S +PR+ G+TYIG+TV+P RRI+QHN G+ GA +T + PW+MVL +YGF
Sbjct: 27 FFACYLLTSLSPRHKGQTYIGFTVNPRRRIRQHN-GEITSGAWRTKKKRPWEMVLCIYGF 85
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P ++SAL+FEWAWQHP+ S ++ A + ++L++ ML W L LTV +
Sbjct: 86 PTNVSALQFEWAWQHPRESVAVREAAAAFKSFSGVASKIKLVYTMLNLPAWNSLNLTVNY 145
Query: 123 LKPEY 127
+Y
Sbjct: 146 FSSKY 150
>gi|343957956|emb|CBY93775.1| putative slx1 protein [Glomus diaphanum]
Length = 197
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 82/125 (65%), Gaps = 3/125 (2%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+ YLL S +P+Y +YIG T DP RR++QHN G+ GA KTSN+ PW+M+L VYGF
Sbjct: 19 FYCCYLLRSLSPKYKQTSYIGSTNDPKRRLRQHN-GEIASGAKKTSNKRPWEMILFVYGF 77
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHI--MLQTAPWQRLPLTV 120
PN ++AL+FEW+WQ+P ++RRLQ R++ KE LL + ML+ W R PL +
Sbjct: 78 PNHVAALQFEWSWQNPSITRRLQLKNREEFKENDDKLSTSLLALSKMLKDKFWSRWPLHL 137
Query: 121 QWLKP 125
L P
Sbjct: 138 HILIP 142
>gi|328793690|ref|XP_396577.3| PREDICTED: serine/threonine-protein kinase TAO1 [Apis mellifera]
Length = 1079
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 83/128 (64%), Gaps = 16/128 (12%)
Query: 6 VYLLYSRNPRYLGR-----TYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
+ LL+ R R L + IG+ R+K+HN GK+ GA KTS++GPW+MVLI++
Sbjct: 834 IRLLHERQERELQQFDEESARIGF------RLKEHNAGKEHKGARKTSDKGPWNMVLIIH 887
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQHV----ARKK-SKETTYTYCLRLLHIMLQTAPWQR 115
GF N SALRFEWAWQHP SRRL+H+ A+KK ++ + L +L ML+ PW R
Sbjct: 888 GFLNKTSALRFEWAWQHPHKSRRLKHIYVSNAKKKLQQKRKIRFHLSVLSEMLKIGPWCR 947
Query: 116 LPLTVQWL 123
LPLT++WL
Sbjct: 948 LPLTIRWL 955
>gi|224145473|ref|XP_002325655.1| predicted protein [Populus trichocarpa]
gi|222862530|gb|EEF00037.1| predicted protein [Populus trichocarpa]
Length = 207
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 78/126 (61%), Gaps = 1/126 (0%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F YLL S PR+ G TYIG+TV+P RRI+QHN G+ GA +T R PW+MV+ VYGF
Sbjct: 27 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHN-GELRSGACRTKKRRPWEMVICVYGF 85
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P +++AL+FEWAWQHP S ++ A + ++L + ML WQ L +TV +
Sbjct: 86 PTNVAALQFEWAWQHPTESVAVRQAAAAFKSFSGVANKIKLAYTMLNLPSWQSLNITVNY 145
Query: 123 LKPEYQ 128
+Y+
Sbjct: 146 FSTQYK 151
>gi|440796842|gb|ELR17943.1| GIYYIG catalytic domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 297
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F G YLL SRN Y TYIG+TV+P RRI+QHN G+ GA +T + PW+MV++VYGF
Sbjct: 27 FFGCYLLTSRNEAYRRHTYIGFTVNPSRRIRQHN-GELVQGAKRTRTKRPWEMVMVVYGF 85
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVAR-----KKSKETTYTYCLRLLHIMLQTAPWQRLP 117
P+ +ALRFEW W +P+ SRR++ K LRL+ +L PW R P
Sbjct: 86 PSKTAALRFEWGWTYPQKSRRIKEALSHRDLTKLGSPHMLKARLRLMFELLHVTPWNRFP 145
Query: 118 LTVQWL 123
L + WL
Sbjct: 146 LVIHWL 151
>gi|159468650|ref|XP_001692487.1| predicted protein [Chlamydomonas reinhardtii]
gi|158278200|gb|EDP03965.1| predicted protein [Chlamydomonas reinhardtii]
Length = 332
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 84/125 (67%), Gaps = 3/125 (2%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F G YLL S++P++ GRTYIG+TV+P RRI+QHN G GA KT PW+M L++YGF
Sbjct: 4 FFGCYLLASQSPKHKGRTYIGFTVNPRRRIRQHN-GLIKNGAWKTHKGRPWEMTLVLYGF 62
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHI--MLQTAPWQRLPLTV 120
P I AL+FEWAWQHP+ S ++ +A+ ++ ++L + ML +PW+ PLT+
Sbjct: 63 PTKIQALQFEWAWQHPERSLIVRPIAQALGRQRMQGVRGKILLMLSMLHESPWRHFPLTL 122
Query: 121 QWLKP 125
Q+L P
Sbjct: 123 QYLAP 127
>gi|167524092|ref|XP_001746382.1| hypothetical protein [Monosiga brevicollis MX1]
gi|259511404|sp|A9V196.1|SLX1_MONBE RecName: Full=Structure-specific endonuclease subunit SLX1 homolog
gi|163775144|gb|EDQ88769.1| predicted protein [Monosiga brevicollis MX1]
Length = 420
Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 56/121 (46%), Positives = 72/121 (59%), Gaps = 5/121 (4%)
Query: 11 SRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALR 70
++N + LG IG+T DP RR++QHN G T +G WDM IVYGFPN ++ALR
Sbjct: 32 TQNTKLLGLQDIGFTTDPVRRLRQHNSEIGGGAVRTTRAKGSWDMAAIVYGFPNKVAALR 91
Query: 71 FEWAWQHPKMSRRLQHVAR-----KKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQWLKP 125
FEWAWQHP SRRL+ R ++ + T L L ML T PW PLT+ WL+P
Sbjct: 92 FEWAWQHPLKSRRLRDAVRSDLPASRAAQMQLTAKLHTLAAMLYTVPWSDQPLTLCWLQP 151
Query: 126 E 126
+
Sbjct: 152 D 152
>gi|224124772|ref|XP_002319418.1| predicted protein [Populus trichocarpa]
gi|222857794|gb|EEE95341.1| predicted protein [Populus trichocarpa]
Length = 192
Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 76/126 (60%), Gaps = 1/126 (0%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F YLL S PR+ G TYIG+TV+P RRI+QHN G+ GA +T R PW+MV +YGF
Sbjct: 12 FFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHN-GELRSGACRTKKRRPWEMVFCIYGF 70
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P +++AL+FEWAWQHP S ++ A + ++L + ML WQ L +T+ +
Sbjct: 71 PTNVAALQFEWAWQHPTESVAVRQAAAAFKSFSGVANKIKLAYTMLNLPSWQSLNITINY 130
Query: 123 LKPEYQ 128
Y+
Sbjct: 131 FSTNYK 136
>gi|356537639|ref|XP_003537333.1| PREDICTED: structure-specific endonuclease subunit SLX1-like
[Glycine max]
Length = 380
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 79/125 (63%), Gaps = 1/125 (0%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F YLL S +PR+ G TYIG+TV+P RRI+QHN G+ GA +T R PW+MVL +YGF
Sbjct: 35 FFACYLLTSLSPRFKGHTYIGFTVNPRRRIRQHN-GEIGCGAWRTKKRRPWEMVLCIYGF 93
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P ++SAL+FEWAWQHP S ++ A + + ++L + ML WQ + +TV +
Sbjct: 94 PTNVSALQFEWAWQHPVESLAVRKAAVEFKSLSGIANKIKLAYTMLTLPSWQSMNITVNF 153
Query: 123 LKPEY 127
+Y
Sbjct: 154 FSTKY 158
>gi|297745781|emb|CBI15837.3| unnamed protein product [Vitis vinifera]
Length = 346
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 78/127 (61%), Gaps = 1/127 (0%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F YLL S +PR+ G +YIG+TV+P RRI+QHN G+ GA KT + PW+MVL +YGF
Sbjct: 24 FFACYLLASLSPRHKGHSYIGFTVNPRRRIRQHN-GEITCGAWKTKRKRPWEMVLCIYGF 82
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P ++SAL+FEWAWQHP S ++ A + ++L + M WQ L LTV +
Sbjct: 83 PTNVSALQFEWAWQHPTESLAVRKAAAGFKSLSGIANKIKLAYTMFTLPAWQSLNLTVNF 142
Query: 123 LKPEYQQ 129
+Y +
Sbjct: 143 FSTKYTK 149
>gi|359479058|ref|XP_002276725.2| PREDICTED: structure-specific endonuclease subunit SLX1 homolog
2-like [Vitis vinifera]
Length = 364
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 78/127 (61%), Gaps = 1/127 (0%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F YLL S +PR+ G +YIG+TV+P RRI+QHN G+ GA KT + PW+MVL +YGF
Sbjct: 24 FFACYLLASLSPRHKGHSYIGFTVNPRRRIRQHN-GEITCGAWKTKRKRPWEMVLCIYGF 82
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P ++SAL+FEWAWQHP S ++ A + ++L + M WQ L LTV +
Sbjct: 83 PTNVSALQFEWAWQHPTESLAVRKAAAGFKSLSGIANKIKLAYTMFTLPAWQSLNLTVNF 142
Query: 123 LKPEYQQ 129
+Y +
Sbjct: 143 FSTKYTK 149
>gi|297826441|ref|XP_002881103.1| endo/excinuclease amino terminal domain-containing protein
[Arabidopsis lyrata subsp. lyrata]
gi|297326942|gb|EFH57362.1| endo/excinuclease amino terminal domain-containing protein
[Arabidopsis lyrata subsp. lyrata]
Length = 383
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 80/130 (61%), Gaps = 6/130 (4%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F YLL S +PR+ G+TYIG+TV+P RRI+QHN G+ GA +T + PW+MVL +YGF
Sbjct: 27 FFACYLLTSLSPRHKGQTYIGFTVNPRRRIRQHN-GEITSGAWRTKKKRPWEMVLCIYGF 85
Query: 63 PNDISA-----LRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
P ++SA L+FEWAWQHP+ S ++ A + ++L++ ML W L
Sbjct: 86 PTNVSALQKPPLQFEWAWQHPRESVAVREAAAAFKSFSGIASKIKLVYTMLNLPAWNSLN 145
Query: 118 LTVQWLKPEY 127
LTV + +Y
Sbjct: 146 LTVNYFSSKY 155
>gi|449454983|ref|XP_004145233.1| PREDICTED: uncharacterized protein LOC101203492 [Cucumis sativus]
gi|449471301|ref|XP_004153269.1| PREDICTED: uncharacterized protein LOC101204996 [Cucumis sativus]
gi|449506301|ref|XP_004162709.1| PREDICTED: uncharacterized protein LOC101229010 [Cucumis sativus]
Length = 395
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 78/127 (61%), Gaps = 1/127 (0%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F YLL S PR+ G TYIG+TV+P RRI+QHN G+ GA +T + PW+MVL +YGF
Sbjct: 33 FFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVLCIYGF 91
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P ++SAL+FEWAWQHP S ++ A + ++L + ML W+ L +TV +
Sbjct: 92 PTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWRGLNITVNY 151
Query: 123 LKPEYQQ 129
++ +
Sbjct: 152 FSTKFMK 158
>gi|299472046|emb|CBN80129.1| endo/excinuclease amino terminal domain-containing protein
[Ectocarpus siliculosus]
Length = 350
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 81/129 (62%), Gaps = 6/129 (4%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
FH YLL S++P++ TYIG+TVDP RRI+QHN G GGA +T + PWDMV IV+GF
Sbjct: 11 FH-CYLLQSQDPKHKRSTYIGFTVDPGRRIRQHN-GDIIGGAFRTKRKRPWDMVAIVHGF 68
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYC----LRLLHIMLQTAPWQRLPL 118
P+ SAL+FE AWQHP+ RR++ ++ T LRL ML PW R L
Sbjct: 69 PSKSSALQFEAAWQHPQRDRRIKVKVPDLPVDSRRTVGVPGKLRLCKAMLCLDPWARYGL 128
Query: 119 TVQWLKPEY 127
+++L+ EY
Sbjct: 129 GIRFLREEY 137
>gi|326433300|gb|EGD78870.1| GIY-YIG domain-containing protein 1 [Salpingoeca sp. ATCC 50818]
Length = 384
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 81/136 (59%), Gaps = 15/136 (11%)
Query: 7 YLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSN-RGPWDMVLIVYGFPND 65
YLL PR RTYIG++VDP RR++QHN G+ GGA +T+ +G W MVL V+GFP+
Sbjct: 58 YLLTGTQPRTRKRTYIGFSVDPRRRLRQHN-GEVKGGARRTARCKGSWKMVLFVFGFPSK 116
Query: 66 ISALRFEWAWQHPKMSRRL----------QHVARKKSKETT---YTYCLRLLHIMLQTAP 112
++ALRFEWAWQHP +SR L Q A K+ + + L + ML T P
Sbjct: 117 VAALRFEWAWQHPWLSRCLKDARAKEEGSQAAAGKRVRRNSPQQLPQALATVMTMLNTPP 176
Query: 113 WQRLPLTVQWLKPEYQ 128
WQ LPL + WL + +
Sbjct: 177 WQSLPLHLCWLDADVE 192
>gi|146088867|ref|XP_001466168.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|259511402|sp|A4I1H7.1|SLX1_LEIIN RecName: Full=Structure-specific endonuclease subunit SLX1 homolog
gi|134070270|emb|CAM68607.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 705
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 56/120 (46%), Positives = 77/120 (64%), Gaps = 2/120 (1%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG-PWDMVLIVYG 61
FH VYLL S +P+ G YIGYTV+P RR++QHN G+ GA +TS RG PW +V V G
Sbjct: 5 FHCVYLLTSLDPQCEGDFYIGYTVNPLRRLRQHN-GELVNGARRTSRRGRPWTIVCCVSG 63
Query: 62 FPNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQ 121
FP+D +AL+FEW WQHP S RL+H + Y + LH++++ + + RL LT+
Sbjct: 64 FPDDRAALKFEWCWQHPTASARLRHAIDILTGLRRLPYAVATLHLLVRASLFCRLDLTLH 123
>gi|123449980|ref|XP_001313690.1| GIY-YIG catalytic domain containing protein [Trichomonas vaginalis
G3]
gi|121895582|gb|EAY00761.1| GIY-YIG catalytic domain containing protein [Trichomonas vaginalis
G3]
Length = 249
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 6/124 (4%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYG 61
F G Y+L S+NP+Y YIG+TV+P RRIKQHN G GGA KT PW+M L+V+G
Sbjct: 3 TFAGCYILRSQNPQYKTHCYIGFTVNPPRRIKQHN-GARVGGAFKTHTMRPWEMTLVVWG 61
Query: 62 FPNDISALRFEWAWQHPKMSRRLQHVA-----RKKSKETTYTYCLRLLHIMLQTAPWQRL 116
FP AL+FEW WQHP ++ L+H+ +++ Y L++L ML + W RL
Sbjct: 62 FPTKKLALKFEWTWQHPTEAKSLKHINFEEFYQREGGPRKYNTNLKILKEMLLSQQWNRL 121
Query: 117 PLTV 120
L +
Sbjct: 122 SLRI 125
>gi|168052727|ref|XP_001778791.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669797|gb|EDQ56377.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 543
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 58/126 (46%), Positives = 72/126 (57%), Gaps = 2/126 (1%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F YLL S NPRY G YIG+TV+P RRI+QHN G+ GA +T + PWDM+L VYGF
Sbjct: 67 FFACYLLTSLNPRYKGCHYIGFTVNPRRRIRQHN-GELTSGAWRTHRKRPWDMILCVYGF 125
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVA-RKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQ 121
+ AL+FEWAWQHP S ++ A R S LL ML W + L VQ
Sbjct: 126 ACQVEALQFEWAWQHPLKSLVVREAAGRIPSSVRGLKKQFYLLFTMLNCDKWSAMDLNVQ 185
Query: 122 WLKPEY 127
+ +Y
Sbjct: 186 FFSSKY 191
>gi|212723530|ref|NP_001132010.1| uncharacterized protein LOC100193415 [Zea mays]
gi|194693186|gb|ACF80677.1| unknown [Zea mays]
gi|195627240|gb|ACG35450.1| hypothetical protein [Zea mays]
gi|414884064|tpg|DAA60078.1| TPA: hypothetical protein ZEAMMB73_892976 [Zea mays]
Length = 377
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 78/130 (60%), Gaps = 1/130 (0%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F YLL S PR GRTYIG+TV+P RRI+QHN G+ GA +T PW+MVL +YGF
Sbjct: 53 FFCCYLLRSLCPRSKGRTYIGFTVNPRRRIRQHN-GEIVSGAWRTRRGRPWEMVLCIYGF 111
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P++++AL+FEWAWQHP S ++ A + ++L + ML W+ L LTV +
Sbjct: 112 PSNVAALQFEWAWQHPTESLAVRKAAAEFKSLGGIGNKVKLAYTMLNLPSWESLNLTVNF 171
Query: 123 LKPEYQQVLT 132
+ + T
Sbjct: 172 FSSKNTKFTT 181
>gi|398016558|ref|XP_003861467.1| hypothetical protein, conserved [Leishmania donovani]
gi|322499693|emb|CBZ34767.1| hypothetical protein, conserved [Leishmania donovani]
Length = 705
Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats.
Identities = 55/120 (45%), Positives = 77/120 (64%), Gaps = 2/120 (1%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG-PWDMVLIVYG 61
FH VYLL S +P+ G YIGYTV+P RR++QHN G+ GA +TS RG PW +V V G
Sbjct: 5 FHCVYLLTSLDPQCEGDFYIGYTVNPLRRLRQHN-GELVNGARRTSRRGRPWTIVCCVSG 63
Query: 62 FPNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQ 121
FP+D +AL+FEW WQHP S RL+H + Y + LH++++ + + +L LT+
Sbjct: 64 FPDDRAALKFEWCWQHPTASARLRHAIDILTGLRRLPYAVATLHLLVRASLFCQLDLTLH 123
>gi|407406431|gb|EKF30795.1| hypothetical protein MOQ_005381 [Trypanosoma cruzi marinkellei]
Length = 530
Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats.
Identities = 56/125 (44%), Positives = 77/125 (61%), Gaps = 2/125 (1%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG-PWDMVLIVYG 61
FH VYLL S +P+ +G YIGYTVDP RR++QHN G+ GA +T RG PW+++ V G
Sbjct: 5 FHCVYLLTSLDPQCVGEYYIGYTVDPIRRLRQHN-GEIVSGAWRTKRRGRPWELLCCVSG 63
Query: 62 FPNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQ 121
F D AL+FEW WQHP S RL+ + Y + +LH++L+ + RL LT+
Sbjct: 64 FGEDRIALKFEWCWQHPTKSTRLKTSMAQLRGVHRLPYAVGVLHLLLRADLFARLQLTLH 123
Query: 122 WLKPE 126
+PE
Sbjct: 124 IFEPE 128
>gi|71406037|ref|XP_805589.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|122016031|sp|Q4CTY5.1|SLX12_TRYCC RecName: Full=Structure-specific endonuclease subunit SLX1 homolog
2
gi|70869055|gb|EAN83738.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 530
Score = 108 bits (269), Expect = 8e-22, Method: Composition-based stats.
Identities = 56/126 (44%), Positives = 77/126 (61%), Gaps = 2/126 (1%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG-PWDMVLIVYG 61
FH VYLL S +P+ G YIGYTVDP RR++QHN G+ GA +T RG PW+++ V G
Sbjct: 5 FHCVYLLTSLDPQCAGEYYIGYTVDPIRRLRQHN-GEIVSGAWRTKRRGRPWELLCCVSG 63
Query: 62 FPNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQ 121
F D AL+FEW WQHP S RL+ + Y + +LH++L+ + RL LT+
Sbjct: 64 FGEDRIALKFEWCWQHPTKSTRLKTQMTQLRGVHRLPYAVGVLHLLLRADLFARLQLTLH 123
Query: 122 WLKPEY 127
+PE+
Sbjct: 124 IFEPEH 129
>gi|343470006|emb|CCD17159.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 520
Score = 108 bits (269), Expect = 9e-22, Method: Composition-based stats.
Identities = 55/133 (41%), Positives = 83/133 (62%), Gaps = 3/133 (2%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG-PWDMVLIVYG 61
FH VYLL S +P+ G YIGY+++P RR++QHN G+ GA +T G PW ++L V G
Sbjct: 5 FHSVYLLTSLDPQLPGAYYIGYSLNPVRRLRQHN-GELVNGARRTRKCGRPWILLLCVSG 63
Query: 62 FPNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQ 121
F D AL+FEW WQHP S +L+ ++ + TY + +LH++L+T P+ RL L +
Sbjct: 64 FGEDRIALKFEWCWQHPAKSAKLKTQVQQLRGASRLTYAVGVLHLLLRTDPFSRLQLMLH 123
Query: 122 WLKPE-YQQVLTE 133
E ++QV+ +
Sbjct: 124 IFSTEHFEQVMGQ 136
>gi|326492143|dbj|BAJ98296.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 439
Score = 108 bits (269), Expect = 9e-22, Method: Composition-based stats.
Identities = 53/121 (43%), Positives = 73/121 (60%), Gaps = 1/121 (0%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F YLL S PR RTYIG+TV+P RRI+QHN G+ GA +T PW+M+L +YGF
Sbjct: 47 FFCCYLLRSLCPRSKSRTYIGFTVNPRRRIRQHN-GELRCGAWRTKRGRPWEMMLCIYGF 105
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P +++AL+FEWAWQHP S ++ A + ++L + ML W+ L LTV +
Sbjct: 106 PTNVAALQFEWAWQHPTESLAVRKAAAEFKSLGGIGNKVKLAYTMLNLPSWENLNLTVNF 165
Query: 123 L 123
Sbjct: 166 F 166
>gi|345313355|ref|XP_001517370.2| PREDICTED: structure-specific endonuclease subunit SLX1-like,
partial [Ornithorhynchus anatinus]
Length = 297
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 66/89 (74%)
Query: 44 AHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRL 103
A K + W+MVLIV+GFP+ ++ALRFEWAWQHP SRRL HVA + +E + + LR+
Sbjct: 39 AQKLPSPLAWEMVLIVHGFPSSVAALRFEWAWQHPGASRRLGHVAGRGRREAAFPFHLRV 98
Query: 104 LHIMLQTAPWQRLPLTVQWLKPEYQQVLT 132
L MLQ APW RLPLT++WL+ ++Q+ LT
Sbjct: 99 LAQMLQVAPWSRLPLTLRWLRQDFQRDLT 127
>gi|125557750|gb|EAZ03286.1| hypothetical protein OsI_25432 [Oryza sativa Indica Group]
Length = 444
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 54/121 (44%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F YLL S PR G TYIG+TV+P RRI+QHN G+ GA +T PW+MVL +YGF
Sbjct: 69 FFCCYLLRSLCPRRKGSTYIGFTVNPRRRIRQHN-GEIRCGAWQTKRGRPWEMVLCIYGF 127
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P +++AL+FEWAWQHP S ++ A ++L + ML W+ L LTV +
Sbjct: 128 PTNVAALQFEWAWQHPTESLAVRKAAASFKSLGGVGSKVKLAYTMLNLPSWENLDLTVNF 187
Query: 123 L 123
Sbjct: 188 F 188
>gi|407847206|gb|EKG03035.1| hypothetical protein TCSYLVIO_005929 [Trypanosoma cruzi]
Length = 530
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 56/125 (44%), Positives = 76/125 (60%), Gaps = 2/125 (1%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG-PWDMVLIVYG 61
FH VYLL S +P+ G YIGYTVDP RR++QHN G+ GA +T RG PW+++ V G
Sbjct: 5 FHCVYLLTSLDPQCAGEYYIGYTVDPIRRLRQHN-GEIVSGAWRTKRRGRPWELLCCVSG 63
Query: 62 FPNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQ 121
F D AL+FEW WQHP S RL+ + Y + +LH++L+ + RL LT+
Sbjct: 64 FGEDRIALKFEWCWQHPTKSTRLKTQMTQLRGVHRLPYAVGVLHLLLRADLFARLQLTLH 123
Query: 122 WLKPE 126
+PE
Sbjct: 124 IFEPE 128
>gi|71416769|ref|XP_810370.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|122019980|sp|Q4D7L5.1|SLX11_TRYCC RecName: Full=Structure-specific endonuclease subunit SLX1 homolog
1
gi|70874889|gb|EAN88519.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 529
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 56/125 (44%), Positives = 76/125 (60%), Gaps = 2/125 (1%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG-PWDMVLIVYG 61
FH VYLL S +P+ G YIGYTVDP RR++QHN G+ GA +T RG PW+++ V G
Sbjct: 5 FHCVYLLTSLDPQCAGEYYIGYTVDPIRRLRQHN-GEIVSGAWRTKRRGRPWELLCCVSG 63
Query: 62 FPNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQ 121
F D AL+FEW WQHP S RL+ + Y + +LH++L+ + RL LT+
Sbjct: 64 FGEDRIALKFEWCWQHPTKSTRLKTQMTQLRGVHRLPYAVGVLHLLLRADLFARLQLTLH 123
Query: 122 WLKPE 126
+PE
Sbjct: 124 IFEPE 128
>gi|115471265|ref|NP_001059231.1| Os07g0230500 [Oryza sativa Japonica Group]
gi|23617258|dbj|BAC20925.1| hypothetical protein [Oryza sativa Japonica Group]
gi|50510284|dbj|BAD31692.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113610767|dbj|BAF21145.1| Os07g0230500 [Oryza sativa Japonica Group]
gi|125599613|gb|EAZ39189.1| hypothetical protein OsJ_23615 [Oryza sativa Japonica Group]
Length = 441
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 54/121 (44%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F YLL S PR G TYIG+TV+P RRI+QHN G+ GA +T PW+MVL +YGF
Sbjct: 63 FFCCYLLRSLCPRRKGSTYIGFTVNPRRRIRQHN-GEIRCGAWQTKRGRPWEMVLCIYGF 121
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P +++AL+FEWAWQHP S ++ A ++L + ML W+ L LTV +
Sbjct: 122 PTNVAALQFEWAWQHPTESLAVRKAAASFKSLGGVGSKVKLAYTMLNLPSWENLNLTVNF 181
Query: 123 L 123
Sbjct: 182 F 182
>gi|389601512|ref|XP_003723181.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322505073|emb|CBZ14723.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 701
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 56/131 (42%), Positives = 81/131 (61%), Gaps = 2/131 (1%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG-PWDMVLIVYG 61
FH VYLL S +P+ G YIGYTV+P RR++QHN G+ GA +TS RG PW +V V G
Sbjct: 5 FHCVYLLTSLDPQCEGDFYIGYTVNPLRRLRQHN-GELVNGARRTSRRGRPWTIVCCVSG 63
Query: 62 FPNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQ 121
F +D +AL+FEW WQHP +S RL++ + Y + LH++++ + + +L LT+
Sbjct: 64 FTDDRAALKFEWCWQHPTVSARLRNTIDVLTGLRRLPYAVATLHLLVRASLFCQLDLTLH 123
Query: 122 WLKPEYQQVLT 132
+P Q T
Sbjct: 124 IFEPALLQEAT 134
>gi|19114332|ref|NP_593420.1| structure-specific endonuclease catalytic subunit
[Schizosaccharomyces pombe 972h-]
gi|74625411|sp|Q9P7M3.1|SLX1_SCHPO RecName: Full=Structure-specific endonuclease subunit slx1
gi|7106110|emb|CAB76036.1| structure-specific endonuclease catalytic subunit
[Schizosaccharomyces pombe]
Length = 271
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 74/121 (61%), Gaps = 1/121 (0%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+ YLL S + G YIG T DP RR++QHN G+ GGA KT + PW + +VYGF
Sbjct: 6 FYCCYLLKSNRTQSSGAVYIGSTPDPPRRLRQHN-GEIVGGASKTKHGRPWSISCLVYGF 64
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
PN +SAL+FEW WQ+ +SR + + K+ T YCL+ L ++ + W+R PL + +
Sbjct: 65 PNKVSALKFEWNWQNLGISRYTKDCDFRSKKQKTIMYCLKGLKHLVDSDTWRRWPLNITF 124
Query: 123 L 123
L
Sbjct: 125 L 125
>gi|294939502|ref|XP_002782502.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239894108|gb|EER14297.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 313
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 80/132 (60%), Gaps = 11/132 (8%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+G YLL S +G YIG+TV+P RRI+QHN + GGAH+T PW M+L+ YGF
Sbjct: 12 FYGCYLLQSEASPNVG--YIGFTVNPRRRIRQHNGELNNGGAHRTKRHRPWKMLLVCYGF 69
Query: 63 PNDISALRFEWAWQHPKMSR----RLQHVAR---KKSKETTYTY--CLRLLHIMLQTAPW 113
+ + AL+FEW WQHP++SR L ++ + K+ ++ T L L+ ML PW
Sbjct: 70 SSQVQALQFEWTWQHPRLSRLTREGLANIGKGLTKRGRQRTNNVHDSLALVIGMLHLPPW 129
Query: 114 QRLPLTVQWLKP 125
R+PL + L+P
Sbjct: 130 SRMPLVLNVLEP 141
>gi|242047924|ref|XP_002461708.1| hypothetical protein SORBIDRAFT_02g006850 [Sorghum bicolor]
gi|241925085|gb|EER98229.1| hypothetical protein SORBIDRAFT_02g006850 [Sorghum bicolor]
Length = 386
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 74/122 (60%), Gaps = 1/122 (0%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F YLL S PR RTYIG+TV+P RRI+QHN G+ GA +T PW+MVL +YGF
Sbjct: 56 FFCCYLLRSLCPRSKSRTYIGFTVNPRRRIRQHN-GEIVSGAWRTRRGRPWEMVLCIYGF 114
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P++++AL+FEWAWQHP S ++ A + + ++L + ML W+ L L V +
Sbjct: 115 PSNVAALQFEWAWQHPTESLAVRKAAAEFKSLSGIGNKVKLAYTMLNLPSWENLNLAVNF 174
Query: 123 LK 124
Sbjct: 175 FS 176
>gi|239791838|dbj|BAH72332.1| ACYPI010123 [Acyrthosiphon pisum]
Length = 191
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 55/74 (74%)
Query: 55 MVLIVYGFPNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQ 114
MVLIV+GFPNDISALRFEWAWQ+PK SRRL+H+A K E Y YC+R+L ML PW
Sbjct: 1 MVLIVHGFPNDISALRFEWAWQNPKTSRRLKHIALKSRTEKAYDYCIRILSEMLHVGPWN 60
Query: 115 RLPLTVQWLKPEYQ 128
RL L V+WL Y+
Sbjct: 61 RLALNVRWLNMHYR 74
>gi|328771142|gb|EGF81182.1| hypothetical protein BATDEDRAFT_87437 [Batrachochytrium
dendrobatidis JAM81]
Length = 447
Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 57/133 (42%), Positives = 77/133 (57%), Gaps = 8/133 (6%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+ YLL S P YIG T+DP RR++QHN G GGA +T PW+MV IVYGF
Sbjct: 7 FYSCYLLRSCQPGRRIPAYIGSTLDPSRRLRQHN-GLIKGGAQQTIKWRPWEMVAIVYGF 65
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYC----LRLLHIMLQTAPWQRLPL 118
P+D++AL+FEWAWQ+P SR H + + ET L++L ML W R PL
Sbjct: 66 PSDVTALQFEWAWQNPHKSR---HFKKDQFSETRSNMVVKGKLKVLSKMLHLEYWARWPL 122
Query: 119 TVQWLKPEYQQVL 131
+Q+ + Q++
Sbjct: 123 KIQFTVLDVQEMF 135
>gi|2347198|gb|AAC16937.1| hypothetical protein [Arabidopsis thaliana]
Length = 324
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F YLL S +PR+ G+TYIG+TV+P RRI+QHN G+ GA +T + PW+MVL +YGF
Sbjct: 27 FFACYLLTSLSPRHKGQTYIGFTVNPRRRIRQHN-GEITSGAWRTKKKRPWEMVLCIYGF 85
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVA 88
P ++SAL+FEWAWQHP+ S ++ A
Sbjct: 86 PTNVSALQFEWAWQHPRESVAVREAA 111
>gi|441676204|ref|XP_003282667.2| PREDICTED: structure-specific endonuclease subunit SLX1-like
isoform 2 [Nomascus leucogenys]
Length = 240
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 71/122 (58%), Gaps = 17/122 (13%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY NPRY GR Y+G+TV+P RR++QHN G+ GGA +TS RGPW+MVL+V+GF
Sbjct: 92 FFGVYLLYCLNPRYRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVHGF 151
Query: 63 PNDISALRFE---WAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLT 119
P+ ++ALR E HP R + C L L+ P Q LPL
Sbjct: 152 PSSVAALRDEEGPLCCPHPDCPLR------------AHVIC--LAEEFLREEPGQLLPLE 197
Query: 120 VQ 121
Q
Sbjct: 198 GQ 199
>gi|395515911|ref|XP_003762141.1| PREDICTED: structure-specific endonuclease subunit SLX1
[Sarcophilus harrisii]
Length = 165
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 57/68 (83%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY NP+Y GR Y+G+TV+P RR++QHN G+ GGA +TS RGPW+MVLIV+GF
Sbjct: 16 FFGVYLLYCLNPKYRGRVYVGFTVNPSRRVQQHNAGRKKGGAWRTSGRGPWEMVLIVHGF 75
Query: 63 PNDISALR 70
P+D++ALR
Sbjct: 76 PSDVAALR 83
>gi|405117753|gb|AFR92528.1| hypothetical protein CNAG_00395 [Cryptococcus neoformans var.
grubii H99]
Length = 459
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 54/137 (39%), Positives = 79/137 (57%), Gaps = 10/137 (7%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+ YLL S+ RTY+G T DP RRI+QHN G+ GA TS PW+M +IVYGF
Sbjct: 28 FYACYLLRSKASANSNRTYVGSTPDPPRRIRQHN-GEIKQGAWSTSRHRPWEMQMIVYGF 86
Query: 63 PNDISALRFEWAWQHPKMSRRLQ---------HVARKKSKETTYTYCLRLLHIMLQTAPW 113
P+ ++AL+FEWAWQ P++SR L+ H+ K ++ + + + +L P+
Sbjct: 87 PSKLAALQFEWAWQKPELSRHLKVRGEDQEYHHIFTKDARRNWVERKVCVAYALLSLTPF 146
Query: 114 QRLPLTVQWLKPEYQQV 130
RLPL V++ E +
Sbjct: 147 NRLPLHVRFFNHETHDI 163
>gi|242025192|ref|XP_002433010.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212518519|gb|EEB20272.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 249
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 61/80 (76%), Gaps = 1/80 (1%)
Query: 54 DMVLIVYGFPNDISALRFEWAWQHPKMSRRLQH-VARKKSKETTYTYCLRLLHIMLQTAP 112
+M L ++GFP+D++ALRFEWAWQHPK SRRL++ + KK+ E+++TYCLR++ ML P
Sbjct: 121 EMTLTIHGFPSDVAALRFEWAWQHPKRSRRLKNIIGNKKTSESSFTYCLRVMFTMLTIPP 180
Query: 113 WQRLPLTVQWLKPEYQQVLT 132
W RLPLT++WL E LT
Sbjct: 181 WCRLPLTLRWLSAEVMANLT 200
>gi|397571868|gb|EJK48000.1| hypothetical protein THAOC_33238 [Thalassiosira oceanica]
Length = 733
Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats.
Identities = 52/132 (39%), Positives = 77/132 (58%), Gaps = 12/132 (9%)
Query: 4 HGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG-PWDMVLIVYGF 62
H YL+ S NP Y +TYIGYT DP RR++QHN G+ GGA +T+ G PW+ V +V GF
Sbjct: 69 HHCYLMRSINPSYPLKTYIGYTTDPLRRVRQHN-GEIVGGARRTAKAGRPWECVAVVSGF 127
Query: 63 PNDISALRFEWAWQHPKMSRRLQH------VARKKSKETTYTYCLRLLHIMLQTAPWQRL 116
+ ++A++FEWAWQH S+ +H +ARK + L LH++L+ P
Sbjct: 128 ADKVAAMQFEWAWQHTGRSKVFRHAVGSDSLARKMKRRRGVKARLDELHVLLERCP---- 183
Query: 117 PLTVQWLKPEYQ 128
P L+ +++
Sbjct: 184 PFNASGLRVDFE 195
>gi|30089945|ref|NP_835145.1| structure-specific endonuclease subunit SLX1 isoform 2 [Homo
sapiens]
gi|62868210|ref|NP_001015000.1| structure-specific endonuclease subunit SLX1 isoform 2 [Homo
sapiens]
gi|46362525|gb|AAH69007.1| GIY-YIG domain containing 2 [Homo sapiens]
gi|120660084|gb|AAI30546.1| GIY-YIG domain containing 2 [Homo sapiens]
gi|120660418|gb|AAI30548.1| GIY-YIG domain containing 2 [Homo sapiens]
gi|146327230|gb|AAI41498.1| GIY-YIG domain containing 1 [synthetic construct]
gi|151555605|gb|AAI48778.1| GIY-YIG domain containing 1 [synthetic construct]
gi|208966368|dbj|BAG73198.1| GIY-YIG domain containing 2 [synthetic construct]
gi|219518283|gb|AAI44463.1| GIY-YIG domain containing 1 [Homo sapiens]
gi|313882702|gb|ADR82837.1| GIY-YIG domain containing 1 (GIYD1), transcript variant 2
[synthetic construct]
Length = 161
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 71/122 (58%), Gaps = 17/122 (13%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY NPRY GR Y+G+TV+ RR++QHN G+ GGA +TS RGPW+MVL+V+GF
Sbjct: 13 FFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVHGF 72
Query: 63 PNDISALRFE---WAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLT 119
P+ ++ALR E HP R HV + L LQ P Q LPL
Sbjct: 73 PSSVAALRDEEGPLCCPHPGCLLR-AHV-------------ICLAEEFLQEEPGQLLPLE 118
Query: 120 VQ 121
Q
Sbjct: 119 GQ 120
>gi|73958512|ref|XP_859133.1| PREDICTED: structure-specific endonuclease subunit SLX1 isoform 2
[Canis lupus familiaris]
Length = 161
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 72/119 (60%), Gaps = 11/119 (9%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY NPR+ GR Y+G+TV+P RR++QHN G+ GGA +TS RGPW+MVLIV+GF
Sbjct: 13 FFGVYLLYCLNPRHRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGRGPWEMVLIVHGF 72
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQ 121
P+ ++ALR E + P + S + + L LQ P Q LPL Q
Sbjct: 73 PSAVAALRDE---EGP--------LCCPHSGCRLRAHMICLAEEFLQEEPGQLLPLEGQ 120
>gi|321249142|ref|XP_003191354.1| GIY-YIG type nuclease catalytic domain containing protein
[Cryptococcus gattii WM276]
gi|317457821|gb|ADV19567.1| GIY-YIG type nuclease catalytic domain containing protein
[Cryptococcus gattii WM276]
Length = 466
Score = 101 bits (252), Expect = 9e-20, Method: Composition-based stats.
Identities = 54/137 (39%), Positives = 78/137 (56%), Gaps = 10/137 (7%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+ YLL S+ RTY+G T DP RR++QHN G+ GA TS PW+M +IVYGF
Sbjct: 27 FYACYLLRSKASANSNRTYVGSTPDPPRRLRQHN-GELTQGAWSTSRHRPWEMQMIVYGF 85
Query: 63 PNDISALRFEWAWQHPKMSRRLQ---------HVARKKSKETTYTYCLRLLHIMLQTAPW 113
P+ +SAL+FEWAWQ P++SR L+ + K +K + + + +L P+
Sbjct: 86 PSKLSALQFEWAWQKPELSRHLKIRGEDEEYHRIFTKDAKRNWVERKVCVAYALLSLPPF 145
Query: 114 QRLPLTVQWLKPEYQQV 130
RLPL V++ E +
Sbjct: 146 NRLPLHVRFFNHETHDI 162
>gi|410173183|ref|XP_003960690.1| PREDICTED: structure-specific endonuclease subunit SLX1-like
isoform 3 [Homo sapiens]
Length = 240
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 71/122 (58%), Gaps = 17/122 (13%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY NPRY GR Y+G+TV+ RR++QHN G+ GGA +TS RGPW+MVL+V+GF
Sbjct: 92 FFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVHGF 151
Query: 63 PNDISALRFE---WAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLT 119
P+ ++ALR E HP R HV + L LQ P Q LPL
Sbjct: 152 PSSVAALRDEEGPLCCPHPGCLLR-AHV-------------ICLAEEFLQEEPGQLLPLE 197
Query: 120 VQ 121
Q
Sbjct: 198 GQ 199
>gi|340052585|emb|CCC46866.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 536
Score = 101 bits (252), Expect = 9e-20, Method: Composition-based stats.
Identities = 56/130 (43%), Positives = 80/130 (61%), Gaps = 3/130 (2%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG-PWDMVLIVYG 61
FH VYLL S NP+ G Y+GYTV+P RR++QHN G+ GAH+T +RG PW ++L V G
Sbjct: 5 FHCVYLLTSLNPQCSGAYYVGYTVNPIRRLRQHN-GELVNGAHRTRSRGRPWLLLLCVSG 63
Query: 62 FPNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQ 121
F D AL+FEW WQ+P S RL+ Y + +L ++L+ AP+ +L LT+
Sbjct: 64 FGEDRIALKFEWCWQNPTKSTRLKAHMSLLRGVYRLQYAVGVLFLLLRVAPFAQLHLTLH 123
Query: 122 WLKPE-YQQV 130
+ ++QV
Sbjct: 124 VFDSDRFEQV 133
>gi|410209508|gb|JAA01973.1| SLX1 structure-specific endonuclease subunit homolog A [Pan
troglodytes]
Length = 240
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 70/122 (57%), Gaps = 17/122 (13%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY NPRY GR Y+G+TV+ RR++QHN G+ GGA +TS RGPW+MVL+V+GF
Sbjct: 92 FFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVHGF 151
Query: 63 PNDISALRFE---WAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLT 119
P+ ++ALR E HP R + C L LQ P Q LPL
Sbjct: 152 PSSVAALRDEEGPLCCPHPGCLLR------------AHVIC--LAEEFLQEEPGQLLPLE 197
Query: 120 VQ 121
Q
Sbjct: 198 GQ 199
>gi|424513540|emb|CCO66162.1| predicted protein [Bathycoccus prasinos]
Length = 398
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 78/136 (57%), Gaps = 4/136 (2%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYG 61
VF YL+ S + ++ G+TY+G+TV+P RR+ QHN GA T P +MVL VYG
Sbjct: 29 VFACCYLVASLSEQHKGKTYVGFTVNPKRRLLQHNGQYANAGAKYTKKLRPCEMVLCVYG 88
Query: 62 FPNDISALRFEWAWQHPKMSRRLQHVARKK----SKETTYTYCLRLLHIMLQTAPWQRLP 117
FP AL FEWAWQ+P SR ++ +A+ K S+ +T L ML +PW+ LP
Sbjct: 89 FPTKTQALGFEWAWQNPTTSRAVKDLAQNKLKIGSRHSTILNKSLLGLAMLNLSPWRHLP 148
Query: 118 LTVQWLKPEYQQVLTE 133
L V + +++ + E
Sbjct: 149 LVVHFFNDTHKRDVLE 164
>gi|116792413|gb|ABK26356.1| unknown [Picea sitchensis]
Length = 262
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 71/132 (53%), Gaps = 11/132 (8%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAH----------KTSNRG 51
F YLL S PR TYIG+TV+P RRI+QHN F +T +
Sbjct: 45 AFFACYLLRSLRPRCKA-TYIGFTVNPRRRIRQHNGEVKFRACRTKKKQQFRPCRTKKKQ 103
Query: 52 PWDMVLIVYGFPNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTA 111
PW+MVL VYGFP+ +SAL+FEWAWQHP SR ++ A + +++ ML
Sbjct: 104 PWEMVLCVYGFPSKVSALKFEWAWQHPTRSRAVKKAAACLKSPRGIAKKIEVVYTMLTLT 163
Query: 112 PWQRLPLTVQWL 123
W+ L LTV +L
Sbjct: 164 EWKDLNLTVNFL 175
>gi|426255237|ref|XP_004021264.1| PREDICTED: structure-specific endonuclease subunit SLX1 [Ovis
aries]
Length = 238
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 67/93 (72%), Gaps = 6/93 (6%)
Query: 41 FG-GAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTY 99
FG G+ KT +MVLIV+GFP+ ++ALRFEWAWQHP+ SRRL HV R+ E T+ +
Sbjct: 19 FGPGSQKTG-----EMVLIVHGFPSAVAALRFEWAWQHPQASRRLTHVGRRLRGEATFAF 73
Query: 100 CLRLLHIMLQTAPWQRLPLTVQWLKPEYQQVLT 132
LR+L ML+ PW RLPLT++WL+ +++Q L
Sbjct: 74 HLRVLAHMLRAPPWARLPLTLRWLRADFRQDLC 106
>gi|357119099|ref|XP_003561283.1| PREDICTED: uncharacterized protein LOC100832723 [Brachypodium
distachyon]
Length = 393
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F YLL S PR G TYIG+TV+P RRI+QHN G+ GA +T PW+MV ++GF
Sbjct: 50 FFCCYLLRSLCPRRKGHTYIGFTVNPRRRIRQHN-GELRCGAWRTKRGRPWEMVFCIHGF 108
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P++++AL+FEWAWQHP S ++ A ++L + ML W+ L LTV +
Sbjct: 109 PSNVAALQFEWAWQHPTESLAVRKAAAGFKSLGGVGNKVKLAYTMLNLPSWENLNLTVNF 168
Query: 123 L 123
Sbjct: 169 F 169
>gi|426381835|ref|XP_004057538.1| PREDICTED: structure-specific endonuclease subunit SLX1-like
isoform 2 [Gorilla gorilla gorilla]
Length = 240
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 70/122 (57%), Gaps = 17/122 (13%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY NPRY GR Y+G+TV+ RR++QHN G+ GGA +TS RGPW+MVL+V+GF
Sbjct: 92 FFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVHGF 151
Query: 63 PNDISALRFE---WAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLT 119
P+ ++ALR E HP R + C L L+ P Q LPL
Sbjct: 152 PSSVAALRDEEGPLCCPHPGCPLR------------AHVIC--LAEEFLREEPGQLLPLE 197
Query: 120 VQ 121
Q
Sbjct: 198 GQ 199
>gi|167377973|ref|XP_001734615.1| structure-specific endonuclease SLX1 [Entamoeba dispar SAW760]
gi|165903820|gb|EDR29249.1| structure-specific endonuclease SLX1, putative [Entamoeba dispar
SAW760]
Length = 308
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 74/133 (55%), Gaps = 6/133 (4%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
VYLL S NP + TYIG T P RRIKQHN G GGA KT + PW+MV++V+ FP
Sbjct: 12 VYLLTSINPGFKYHTYIGKTTCPPRRIKQHN-GIISGGAFKTEAKRPWEMVIVVHSFPTQ 70
Query: 66 ISALRFEWAWQHPKMSRRL-QHVARKKSKET----TYTYCLRLLHIMLQTAPWQRLPLTV 120
L+FEW WQHP+ RR+ Q K K + Y +RLL +LQ + +LPL+V
Sbjct: 71 TKVLQFEWDWQHPEKGRRVRQAFDNMKGKHCGTMFSLQYKIRLLAEILQMPAYCKLPLSV 130
Query: 121 QWLKPEYQQVLTE 133
Y L E
Sbjct: 131 YITTHRYDNFLNE 143
>gi|344253754|gb|EGW09858.1| Structure-specific endonuclease subunit SLX1 [Cricetulus griseus]
Length = 93
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 57/68 (83%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY +NPR+ GR Y+G+TV+P RR++QHN G+ GGA +TS RGPWDMVLI++GF
Sbjct: 10 FFGVYLLYCQNPRHRGRVYVGFTVNPARRVRQHNAGRKKGGAWRTSGRGPWDMVLILHGF 69
Query: 63 PNDISALR 70
P+ ++ALR
Sbjct: 70 PSAVAALR 77
>gi|354496115|ref|XP_003510173.1| PREDICTED: structure-specific endonuclease subunit SLX1-like,
partial [Cricetulus griseus]
Length = 77
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 57/68 (83%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY +NPR+ GR Y+G+TV+P RR++QHN G+ GGA +TS RGPWDMVLI++GF
Sbjct: 10 FFGVYLLYCQNPRHRGRVYVGFTVNPARRVRQHNAGRKKGGAWRTSGRGPWDMVLILHGF 69
Query: 63 PNDISALR 70
P+ ++ALR
Sbjct: 70 PSAVAALR 77
>gi|410984912|ref|XP_003998769.1| PREDICTED: structure-specific endonuclease subunit SLX1 isoform 2
[Felis catus]
Length = 161
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 69/122 (56%), Gaps = 17/122 (13%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY NPR+ GR Y+G+TV+P RR++QHN G+ GGA +TS RGPW MVLIV+GF
Sbjct: 13 FFGVYLLYCLNPRHRGRVYVGFTVNPTRRVQQHNGGRKKGGAWRTSGRGPWAMVLIVHGF 72
Query: 63 PNDISALRFE---WAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLT 119
P+ ++ALR E HP R + L L+ P Q LPL
Sbjct: 73 PSAVAALRDEEGPLCCPHPGCRLRAHVIC--------------LAEEFLEKEPGQLLPLE 118
Query: 120 VQ 121
Q
Sbjct: 119 GQ 120
>gi|358054364|dbj|GAA99290.1| hypothetical protein E5Q_05985 [Mixia osmundae IAM 14324]
Length = 595
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 59/142 (41%), Positives = 80/142 (56%), Gaps = 18/142 (12%)
Query: 3 FHGVYLLYS-RNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYG 61
F+ YLL S RN +Y RTYIG T DP RRI+QHN G GA KT PW+M +IV+G
Sbjct: 68 FYACYLLRSKRNDKYSNRTYIGSTPDPPRRIRQHN-GDLTAGAWKTRFGRPWEMEMIVHG 126
Query: 62 FPNDISALRFEWAWQHPKMSRRLQHVA-------------RKKSKETTYTYCLRLLHIML 108
FP+ +SAL+FEWAWQ P SR L++++ R ++K + +L ML
Sbjct: 127 FPSKLSALQFEWAWQKPGQSRHLRYLSPTSGRPQARFPDDRSRNKPDRK---VSVLKAML 183
Query: 109 QTAPWQRLPLTVQWLKPEYQQV 130
+ PW+ + L V P Q+
Sbjct: 184 TSKPWKVMGLAVTVFSPFASQL 205
>gi|351708909|gb|EHB11828.1| Structure-specific endonuclease subunit SLX1, partial
[Heterocephalus glaber]
Length = 221
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 61/89 (68%), Gaps = 7/89 (7%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY NPR+ GR Y+G+TV+P RR++QHN G+ GGA +TS RGPW+MVL+V+GF
Sbjct: 13 FFGVYLLYCLNPRHRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGRGPWEMVLLVHGF 72
Query: 63 PNDISALRFEWA-------WQHPKMSRRL 84
P+ ++ALR A W P R L
Sbjct: 73 PSAVAALRVRQAPGPLTLRWLRPDFCRDL 101
>gi|440290317|gb|ELP83743.1| hypothetical protein EIN_469570 [Entamoeba invadens IP1]
Length = 319
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 74/131 (56%), Gaps = 6/131 (4%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
VYLL S NP + TYIG T P RRIKQHN G GGA KT ++ PW+MV++V+ FP
Sbjct: 12 VYLLTSINPGFKYHTYIGKTTSPPRRIKQHN-GIIAGGAFKTESKRPWEMVVVVHSFPTQ 70
Query: 66 ISALRFEWAWQHPKMSRRLQHV-ARKKSKETTYTYCL----RLLHIMLQTAPWQRLPLTV 120
L+FEW WQHP+ +R++ K K+ + L RLL MLQ + RLPL +
Sbjct: 71 AKVLQFEWDWQHPEKGKRVKDAYEHMKGKQCGTMFSLRFKIRLLAEMLQMPAYCRLPLGI 130
Query: 121 QWLKPEYQQVL 131
Y + L
Sbjct: 131 YVTTHRYDEFL 141
>gi|407035054|gb|EKE37506.1| GIY-YIG catalytic domain containing protein [Entamoeba nuttalli
P19]
Length = 308
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 74/133 (55%), Gaps = 6/133 (4%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
VYLL S NP + TYIG T P RRIKQHN G GGA KT + PW+MV++V+ FP
Sbjct: 12 VYLLTSINPGFKYHTYIGKTTCPPRRIKQHN-GIISGGAFKTEAKRPWEMVIVVHSFPTQ 70
Query: 66 ISALRFEWAWQHPKMSRRL-QHVARKKSKET----TYTYCLRLLHIMLQTAPWQRLPLTV 120
L+FEW WQHP+ RR+ Q K K + Y +RLL +LQ + +LPL+V
Sbjct: 71 TKVLQFEWDWQHPEKGRRVRQAFDNMKGKHCGTMFSLQYKIRLLAEILQMPSYCKLPLSV 130
Query: 121 QWLKPEYQQVLTE 133
Y L +
Sbjct: 131 YITTHRYDNFLND 143
>gi|67474328|ref|XP_652913.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56469817|gb|EAL47526.1| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS]
gi|449704769|gb|EMD44948.1| structure-specific endonuclease SLX1, putative [Entamoeba
histolytica KU27]
Length = 308
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 74/133 (55%), Gaps = 6/133 (4%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
VYLL S NP + TYIG T P RRIKQHN G GGA KT + PW+MV++V+ FP
Sbjct: 12 VYLLTSINPGFKYHTYIGKTTCPPRRIKQHN-GIISGGAFKTEAKRPWEMVIVVHSFPTQ 70
Query: 66 ISALRFEWAWQHPKMSRRL-QHVARKKSKET----TYTYCLRLLHIMLQTAPWQRLPLTV 120
L+FEW WQHP+ RR+ Q K K + Y +RLL +LQ + +LPL+V
Sbjct: 71 TKVLQFEWDWQHPEKGRRVRQAFDNMKGKHCGTMFSLQYKIRLLAEILQMPAYCKLPLSV 130
Query: 121 QWLKPEYQQVLTE 133
Y L +
Sbjct: 131 YITTHRYDNFLND 143
>gi|37654332|gb|AAQ96271.1| LRRGT00058 [Rattus norvegicus]
Length = 245
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 60/78 (76%)
Query: 55 MVLIVYGFPNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQ 114
MVLI++GFP+ ++ALRFEWAWQHP+ SRRL HV + E ++T+ LR+L ML+ PW
Sbjct: 1 MVLILHGFPSAVAALRFEWAWQHPQASRRLTHVGPRLRSEASFTFHLRVLAHMLRVPPWV 60
Query: 115 RLPLTVQWLKPEYQQVLT 132
RLPLTV+WL+P+++ L
Sbjct: 61 RLPLTVRWLRPDFRHELC 78
>gi|393908020|gb|EFO16704.2| GIY-YIG catalytic domain-containing protein [Loa loa]
Length = 324
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 78/136 (57%), Gaps = 16/136 (11%)
Query: 3 FHGVYLLYSR--NPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F GVY L SR N + R YIGYTV+P+RRI+QHN GK+FGGA KT +RGPW Y
Sbjct: 99 FFGVYCLLSRSSNRYFKNRCYIGYTVNPNRRIRQHNAGKEFGGAKKTDHRGPW------Y 152
Query: 61 GFPNDISALRFEWAWQHPKM----SRRLQHVA----RKKSKETTYTYCLRLLHIMLQTAP 112
G+ + + +M SR ++ +KK+ ET + + LR+ ML + P
Sbjct: 153 GYGMHHTWFSKQCVCITIRMGLAKSREVEKATTFEFKKKTNETAFEFRLRIACHMLNSDP 212
Query: 113 WQRLPLTVQWLKPEYQ 128
W+RL LT +WL PE +
Sbjct: 213 WRRLSLTFRWLLPELE 228
>gi|58259493|ref|XP_567159.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134106707|ref|XP_777895.1| hypothetical protein CNBA3640 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819472|sp|P0CN81.1|SLX1_CRYNB RecName: Full=Structure-specific endonuclease subunit SLX1
gi|338819473|sp|P0CN80.1|SLX1_CRYNJ RecName: Full=Structure-specific endonuclease subunit SLX1
gi|50260595|gb|EAL23248.1| hypothetical protein CNBA3640 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223296|gb|AAW41340.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 487
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 78/133 (58%), Gaps = 10/133 (7%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+ YLL S+ RTY+G T DP RRI+QHN G+ GA TS PW+M +IVYGF
Sbjct: 28 FYACYLLRSKATANSNRTYVGSTPDPPRRIRQHN-GELKQGAWSTSRHRPWEMQMIVYGF 86
Query: 63 PNDISALRFEWAWQHPKMSRRLQ---------HVARKKSKETTYTYCLRLLHIMLQTAPW 113
P+ ++AL+FEWAWQ P++SR L+ H+ K ++ + + + ++ P+
Sbjct: 87 PSKLAALQFEWAWQKPELSRHLRIRGEDQEYYHIFTKDARRNWVERKVCVAYALISLTPF 146
Query: 114 QRLPLTVQWLKPE 126
RLPL V++ E
Sbjct: 147 NRLPLHVRFFNHE 159
>gi|312092521|ref|XP_003147366.1| GIY-YIG catalytic domain-containing protein [Loa loa]
Length = 331
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 78/136 (57%), Gaps = 16/136 (11%)
Query: 3 FHGVYLLYSR--NPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F GVY L SR N + R YIGYTV+P+RRI+QHN GK+FGGA KT +RGPW Y
Sbjct: 99 FFGVYCLLSRSSNRYFKNRCYIGYTVNPNRRIRQHNAGKEFGGAKKTDHRGPW------Y 152
Query: 61 GFPNDISALRFEWAWQHPKM----SRRLQHVA----RKKSKETTYTYCLRLLHIMLQTAP 112
G+ + + +M SR ++ +KK+ ET + + LR+ ML + P
Sbjct: 153 GYGMHHTWFSKQCVCITIRMGLAKSREVEKATTFEFKKKTNETAFEFRLRIACHMLNSDP 212
Query: 113 WQRLPLTVQWLKPEYQ 128
W+RL LT +WL PE +
Sbjct: 213 WRRLSLTFRWLLPELE 228
>gi|401423403|ref|XP_003876188.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492429|emb|CBZ27703.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 704
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 49/119 (41%), Positives = 69/119 (57%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
FH VYLL S +P+ G YIGYTV+P RR++QHN G PW +V V GF
Sbjct: 5 FHCVYLLTSLDPQCDGDFYIGYTVNPLRRLRQHNGELVNGARRTGRRGRPWTIVCCVSGF 64
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQ 121
P+D +AL+FEW WQHP S RL+H + Y + LH++++ + + +L LT+
Sbjct: 65 PDDRAALKFEWCWQHPTASARLRHAIDTLTGLRRLPYAVATLHLLVRASLFSQLDLTLH 123
>gi|145354855|ref|XP_001421690.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581928|gb|ABO99983.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 370
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 76/135 (56%), Gaps = 5/135 (3%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYG 61
+ YL+ S +P G++Y+G+T +P RR+ QHN G GA T P DMVL+V G
Sbjct: 18 ALYACYLVVSLDPSKKGKSYVGFTTNPPRRLAQHN-GAIANGAKYTMRLRPCDMVLVVSG 76
Query: 62 FPNDISALRFEWAWQHPKMSRRLQHVARKK---SKETTYTYCLRLLHIMLQTAPWQRLPL 118
F + + AL+FEWAWQ P R + +AR++ K + ++ ML TAPW+ +PL
Sbjct: 77 FSDKVQALQFEWAWQRPASCRATRTLARERGVSDKTSAPGKKAMVMCGMLNTAPWKHMPL 136
Query: 119 TVQWLKPEYQQVLTE 133
TV + E + L E
Sbjct: 137 TVHCMS-EVGERLIE 150
>gi|157870676|ref|XP_001683888.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|75033571|sp|Q4Q9W0.1|SLX1_LEIMA RecName: Full=Structure-specific endonuclease subunit SLX1 homolog
gi|68126955|emb|CAJ05240.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 704
Score = 96.7 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 49/127 (38%), Positives = 72/127 (56%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
FH VYLL S +P+ G YIGY+V+P RR++QHN G PW +V V GF
Sbjct: 5 FHCVYLLTSLDPQCEGDFYIGYSVNPLRRLRQHNGELVNGARRTGRRGRPWTIVCCVSGF 64
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P+D +AL+FEW WQHP S RL+H + Y + LH++++ + + +L LT+
Sbjct: 65 PDDRTALKFEWCWQHPTASARLRHTIDILTGLRRLPYAVATLHLLVRASLFCQLDLTLHI 124
Query: 123 LKPEYQQ 129
+ + Q
Sbjct: 125 FESAFLQ 131
>gi|328849268|gb|EGF98452.1| hypothetical protein MELLADRAFT_40851 [Melampsora larici-populina
98AG31]
Length = 245
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 71/125 (56%), Gaps = 7/125 (5%)
Query: 2 VFHGVYLLYS-RNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F+ YLL S +N R RTY+G T DP RRI+QHN G+ GGA +T PW+M LI Y
Sbjct: 31 AFYACYLLRSYQNGRMNQRTYVGSTPDPPRRIRQHN-GQIKGGAFRTKYYRPWEMELICY 89
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQH-----VARKKSKETTYTYCLRLLHIMLQTAPWQR 115
GFP+ + AL+FEW W P SR LQ + ++ L++L ML T PW +
Sbjct: 90 GFPSKLVALQFEWVWNTPYKSRHLQKDINPPLNTVNQSQSQLEVKLKVLKKMLTTLPWSQ 149
Query: 116 LPLTV 120
PL V
Sbjct: 150 FPLQV 154
>gi|410173181|ref|XP_003960689.1| PREDICTED: structure-specific endonuclease subunit SLX1-like
isoform 2 [Homo sapiens]
Length = 211
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 58/78 (74%)
Query: 55 MVLIVYGFPNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQ 114
MVL+V+GFP+ ++ALRFEWAWQHP SRRL HV + ET + + LR+L ML+ PW
Sbjct: 1 MVLVVHGFPSSVAALRFEWAWQHPHASRRLAHVGPRLRGETAFAFHLRVLAHMLRAPPWA 60
Query: 115 RLPLTVQWLKPEYQQVLT 132
RLPLT++W++P+ +Q L
Sbjct: 61 RLPLTLRWVRPDLRQDLC 78
>gi|170056421|ref|XP_001864022.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167876119|gb|EDS39502.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 289
Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 58/76 (76%), Gaps = 3/76 (3%)
Query: 55 MVLIVYGFPNDISALRFEWAWQHPKMSRRLQHVA---RKKSKETTYTYCLRLLHIMLQTA 111
MV+I++GFPN++SALRFEWAWQ PK+SRRL+ + +K+ KE+ + Y R+L ML+
Sbjct: 1 MVMIIHGFPNNLSALRFEWAWQQPKVSRRLKAIPELHKKQRKESNFEYNFRILTEMLRIG 60
Query: 112 PWQRLPLTVQWLKPEY 127
PW RLPLTV+WL ++
Sbjct: 61 PWNRLPLTVRWLVDDF 76
>gi|389746267|gb|EIM87447.1| hypothetical protein STEHIDRAFT_139121 [Stereum hirsutum FP-91666
SS1]
Length = 754
Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 53/130 (40%), Positives = 74/130 (56%), Gaps = 3/130 (2%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+ YLL S TYIG T +P RRI+QHN G+ GA KT N+ PW M ++VYGF
Sbjct: 20 FYSCYLLKSHWIPRSTVTYIGSTPNPPRRIRQHN-GEITQGAWKTKNKRPWVMQMVVYGF 78
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKK--SKETTYTYCLRLLHIMLQTAPWQRLPLTV 120
P+ ++AL+FEWAWQHP +SR L+ A + T + + ML P+ PL V
Sbjct: 79 PSKLAALQFEWAWQHPHVSRNLRDDAGSALFKRGTGMKRNILVARTMLSYHPYNVWPLHV 138
Query: 121 QWLKPEYQQV 130
+ E +++
Sbjct: 139 KIFTEEAEKI 148
>gi|353239486|emb|CCA71396.1| related to SLX1-Subunit of a complex, with Slx4p, that hydrolyzes
5` branches from duplex DNA [Piriformospora indica DSM
11827]
Length = 428
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYG 61
VF+ YLL S TYIG T+ P RR++QHN G+ GA +T+ PWDM ++V+G
Sbjct: 17 VFYACYLLKSVKSPTATATYIGSTLHPVRRLRQHN-GELVSGARRTARHRPWDMAMLVHG 75
Query: 62 FPNDISALRFEWAWQHPKMSRRL--QHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLT 119
FP+ ++AL+FEWAWQHP +R L + R S+ +R + +ML T P+ PL
Sbjct: 76 FPSRLAALQFEWAWQHPYKARALKDEDGGRLISRSVGLRAHVRAVRLMLATHPYSNWPLH 135
Query: 120 VQ 121
V+
Sbjct: 136 VK 137
>gi|253742353|gb|EES99189.1| Hypothetical protein GL50581_3572 [Giardia intestinalis ATCC 50581]
Length = 356
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 72/133 (54%), Gaps = 6/133 (4%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
Y L + +P R YIG+T +P RRI+QHN+ K GGA KTS GPW MVL V GF
Sbjct: 10 LFACYCLVTESPELPKRCYIGFTNNPLRRIRQHNR-KIAGGARKTSRYGPWKMVLFVGGF 68
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSK-----ETTYTYCLRLLHIMLQTAPWQRLP 117
P ISAL+FE+ W +P S+ + ++ K T + L +L ++L P+ P
Sbjct: 69 PTKISALKFEYIWTYPSRSKYMNCISATSQKLRVACPRTISTTLDVLTMLLIHPPFSLQP 128
Query: 118 LTVQWLKPEYQQV 130
L V L E ++
Sbjct: 129 LYVVLLDAEADRI 141
>gi|392558768|gb|EIW51954.1| hypothetical protein TRAVEDRAFT_136355 [Trametes versicolor
FP-101664 SS1]
Length = 504
Score = 94.0 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 55/134 (41%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
Query: 3 FHGVYLLYS-RNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYG 61
F+ YLL S R P+ TYIG T P RRI+QHN G+ GA KT N PW M +IV+G
Sbjct: 17 FYACYLLKSVRTPKATA-TYIGSTPSPPRRIRQHN-GEISQGAWKTKNSRPWVMQMIVHG 74
Query: 62 FPNDISALRFEWAWQHPKMSRRLQHVARKKSKETT--YTYC---LRLLHIMLQTAPWQRL 116
FP+ ++AL+FEWAWQHP +SR L+ K ++ + Y +++ M+ + P+
Sbjct: 75 FPSKLAALQFEWAWQHPYISRHLRDNGGKAMFNSSGRFKYLNTNVKVARSMVSSHPYNTW 134
Query: 117 PLTVQWLKPEYQQV 130
PL+V+ E +V
Sbjct: 135 PLSVKIFTEEAAKV 148
>gi|213403910|ref|XP_002172727.1| structure-specific endonuclease catalytic subunit
[Schizosaccharomyces japonicus yFS275]
gi|259511448|sp|B6JY16.1|SLX1_SCHJY RecName: Full=Structure-specific endonuclease subunit slx1
gi|212000774|gb|EEB06434.1| structure-specific endonuclease catalytic subunit
[Schizosaccharomyces japonicus yFS275]
Length = 273
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYG 61
+F+ YLL S YIG T DP RR++QHN G+ GGA+KT PW + V+G
Sbjct: 1 MFYCCYLLVSEKAASRS-VYIGSTPDPARRLRQHN-GEIKGGAYKTKRSRPWKVACFVHG 58
Query: 62 FPNDISALRFEWAWQHPKMSRR---LQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPL 118
FP I+AL+FEW WQHP+ +R QH K T C+R L +ML W R L
Sbjct: 59 FPTKIAALQFEWVWQHPQSTRHDDLRQHSRVVSVKRQTLLSCVRALGVMLCCEAWSRWGL 118
Query: 119 TV 120
V
Sbjct: 119 RV 120
>gi|170098458|ref|XP_001880448.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644886|gb|EDR09135.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 611
Score = 93.2 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 50/127 (39%), Positives = 72/127 (56%), Gaps = 4/127 (3%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+ YLL S TYIG T P RRI+QHN G+ GA KT ++ PW M +IV+GF
Sbjct: 12 FYACYLLKSIQSPLSKATYIGSTPSPPRRIRQHN-GELTQGARKTRHKRPWVMQMIVHGF 70
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARK---KSKETTYTYCLRLLHIMLQTAPWQRLPLT 119
P+ ++AL+FEWAWQHP +SR L+ K+ ++ + + M+ P+ + PL
Sbjct: 71 PSRLAALQFEWAWQHPHVSRHLRDPLGNPIFKNSASSLKKRIETVRAMVSNHPFSKWPLH 130
Query: 120 VQWLKPE 126
V+ E
Sbjct: 131 VKLFTQE 137
>gi|294894436|ref|XP_002774832.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239880503|gb|EER06648.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 468
Score = 92.0 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 41/107 (38%), Positives = 59/107 (55%), Gaps = 9/107 (8%)
Query: 28 PDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKMSRRLQH- 86
P +RI+QHN + GGAH+T PW M+L+ YGF + + AL+FEW WQHP++SR +
Sbjct: 190 PGKRIRQHNGELNNGGAHRTKRHRPWKMLLVCYGFSSQVQALQFEWTWQHPRLSRLTREG 249
Query: 87 --------VARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQWLKP 125
R + + L L+ ML PW R+PL + L+P
Sbjct: 250 LANIGKGLTKRGRQRTNNVHDSLALVIGMLHLPPWSRMPLVLNVLEP 296
>gi|300121504|emb|CBK22023.2| unnamed protein product [Blastocystis hominis]
Length = 122
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 4 HGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFP 63
H YLL S N +Y TYIGYTV+P RRI+QHN+ GA KT PW+M+ +V GFP
Sbjct: 3 HYCYLLRSLNEKYRNSTYIGYTVNPKRRIRQHNREIK-NGAFKTHRAMPWEMICVVCGFP 61
Query: 64 NDISALRFEWAWQHPKMSR 82
+ LRFEWAWQHP S+
Sbjct: 62 DKREGLRFEWAWQHPVHSK 80
>gi|348675415|gb|EGZ15233.1| hypothetical protein PHYSODRAFT_509109 [Phytophthora sojae]
Length = 176
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 79/137 (57%), Gaps = 8/137 (5%)
Query: 1 MVFHGVYLLYS-RNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIV 59
M F YLL + P+ L TY+G+TVDP RRI+QHN G+ GA +T PW+M+ +V
Sbjct: 1 MGFFACYLLTPVQAPQRLRCTYVGFTVDPTRRIRQHN-GELANGAKRTRKFRPWEMIAVV 59
Query: 60 YGFPNDISALRFEWAWQHPKMSR----RLQHVARKKSKETTYTYCLRLLHI--MLQTAPW 113
+GFP+ A++FEW WQHP +S+ +L+ + K + ++L + M+ P+
Sbjct: 60 HGFPSKFRAMQFEWVWQHPLVSKITREQLKFLRGSKGLGAPRSVKRKMLEMLEMVNLEPF 119
Query: 114 QRLPLTVQWLKPEYQQV 130
+ L LTV + E QV
Sbjct: 120 KDLNLTVTFTSEEMHQV 136
>gi|335307559|ref|XP_003360882.1| PREDICTED: LOW QUALITY PROTEIN: structure-specific endonuclease
subunit SLX1-like, partial [Sus scrofa]
Length = 141
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 56/84 (66%), Gaps = 3/84 (3%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY NPR+ GR Y+G+TV+P RR +QHN A +TS RGPW+MVLIV+GF
Sbjct: 3 FFGVYLLYCLNPRHRGRVYVGFTVNPARREQQHNAXXXXXXAWRTSGRGPWEMVLIVHGF 62
Query: 63 PNDISALRFE---WAWQHPKMSRR 83
P+ ++ALR E HP S R
Sbjct: 63 PSAVAALRDEEGPLCCPHPGCSLR 86
>gi|72386583|ref|XP_843716.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|74831338|sp|Q57XV5.1|SLX1_TRYB2 RecName: Full=Structure-specific endonuclease subunit SLX1 homolog
gi|62175421|gb|AAX69563.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70800248|gb|AAZ10157.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 511
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 54/127 (42%), Positives = 79/127 (62%), Gaps = 4/127 (3%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG-PWDMVLIVYG 61
FH VYLL S +P+ G YIGYTV+P RR++QHN G+ GA +T G PW +++ V G
Sbjct: 5 FHCVYLLTSLDPQCEGAHYIGYTVNPIRRLRQHN-GELVNGARRTKRNGRPWLLLMCVSG 63
Query: 62 FPNDISALRFEWAWQHPKMSRRLQ-HVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTV 120
F D AL+FEW WQ+P S RL+ HV++ + T+ + +L ++L+T + RL LT+
Sbjct: 64 FGEDRIALKFEWCWQNPSKSTRLKSHVSQLRCVH-KLTHAVGVLLLLLRTELFSRLQLTL 122
Query: 121 QWLKPEY 127
E+
Sbjct: 123 HIFDREH 129
>gi|261326785|emb|CBH09758.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 511
Score = 89.7 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 53/121 (43%), Positives = 77/121 (63%), Gaps = 4/121 (3%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG-PWDMVLIVYG 61
FH VYLL S +P+ G YIGYTV+P RR++QHN G+ GA +T G PW +++ V G
Sbjct: 5 FHCVYLLTSLDPQCEGAHYIGYTVNPIRRLRQHN-GELVNGARRTKRNGRPWLLLMCVSG 63
Query: 62 FPNDISALRFEWAWQHPKMSRRLQ-HVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTV 120
F D AL+FEW WQ+P S RL+ HV++ + T+ + +L ++L+T + RL LT+
Sbjct: 64 FGEDRIALKFEWCWQNPSKSTRLKSHVSQLRCVH-KLTHAVGVLLLLLRTELFSRLQLTL 122
Query: 121 Q 121
Sbjct: 123 H 123
>gi|221483527|gb|EEE21846.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 860
Score = 89.7 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 42/75 (56%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Query: 3 FHGVYLLYS-RNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYG 61
FH VYLL S +NPRY TY+GY+V P R+KQHN GGA KT PW +VL+++G
Sbjct: 73 FHCVYLLRSLKNPRY---TYVGYSVHPLNRLKQHNGETSHGGAWKTQRHRPWALVLVLHG 129
Query: 62 FPNDISALRFEWAWQ 76
FP I+AL+FEW WQ
Sbjct: 130 FPTQIAALQFEWRWQ 144
>gi|237845043|ref|XP_002371819.1| hypothetical protein TGME49_012170 [Toxoplasma gondii ME49]
gi|211969483|gb|EEB04679.1| hypothetical protein TGME49_012170 [Toxoplasma gondii ME49]
Length = 860
Score = 89.4 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 42/75 (56%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Query: 3 FHGVYLLYS-RNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYG 61
FH VYLL S +NPRY TY+GY+V P R+KQHN GGA KT PW +VL+++G
Sbjct: 73 FHCVYLLRSLKNPRY---TYVGYSVHPLNRLKQHNGETSHGGAWKTQRHRPWALVLVLHG 129
Query: 62 FPNDISALRFEWAWQ 76
FP I+AL+FEW WQ
Sbjct: 130 FPTQIAALQFEWRWQ 144
>gi|221508000|gb|EEE33587.1| GIY-YIG catalytic domain-containing protein [Toxoplasma gondii VEG]
Length = 860
Score = 89.4 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 42/75 (56%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Query: 3 FHGVYLLYS-RNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYG 61
FH VYLL S +NPRY TY+GY+V P R+KQHN GGA KT PW +VL+++G
Sbjct: 73 FHCVYLLRSLKNPRY---TYVGYSVHPLNRLKQHNGETSHGGAWKTQRHRPWALVLVLHG 129
Query: 62 FPNDISALRFEWAWQ 76
FP I+AL+FEW WQ
Sbjct: 130 FPTQIAALQFEWRWQ 144
>gi|195443766|ref|XP_002069565.1| GK19194 [Drosophila willistoni]
gi|194165650|gb|EDW80551.1| GK19194 [Drosophila willistoni]
Length = 225
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 59/82 (71%), Gaps = 3/82 (3%)
Query: 55 MVLIVYGFPNDISALRFEWAWQHPKMSRRLQ---HVARKKSKETTYTYCLRLLHIMLQTA 111
MV+IV+GFPN+ISAL+FEWAWQ P +S RL+ + RKK KE+ + Y R+L+ ML
Sbjct: 1 MVMIVHGFPNNISALQFEWAWQQPTLSTRLKCFPELKRKKPKESHFDYNFRILNRMLGVG 60
Query: 112 PWQRLPLTVQWLKPEYQQVLTE 133
PW RL LT++WL+ ++++ E
Sbjct: 61 PWNRLVLTIRWLETDFERKFEE 82
>gi|347832591|emb|CCD48288.1| hypothetical protein [Botryotinia fuckeliana]
Length = 419
Score = 89.0 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 55/141 (39%), Positives = 76/141 (53%), Gaps = 17/141 (12%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTS--NRGPWDMVLIVY 60
F+G YLL R+ Y+G T +P RR++QHN G GGA +TS N PW+M IV
Sbjct: 10 FYGCYLL--RSTIRHSALYVGSTPNPVRRLRQHN-GLVKGGAVRTSRGNLRPWEMACIVT 66
Query: 61 GFPNDISALRFEWAWQHPKM------SRRLQHVARKKSK------ETTYTYCLRLLHIML 108
GFP I+AL+FEWAWQ+P + S R+ H +KK T L LHI+L
Sbjct: 67 GFPTSIAALQFEWAWQNPHITLHIPPSSRISHATQKKRSGHPKRPRHTLQSLLSNLHILL 126
Query: 109 QTAPWQRLPLTVQWLKPEYQQ 129
+ R PL +++ P+ +
Sbjct: 127 TVPSFSRWPLEIKFFAPDVHR 147
>gi|393244438|gb|EJD51950.1| hypothetical protein AURDEDRAFT_181521 [Auricularia delicata
TFB-10046 SS5]
Length = 704
Score = 89.0 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 48/127 (37%), Positives = 71/127 (55%), Gaps = 4/127 (3%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+ YLL SR TYIG T P RRI+QHN G+ GGA KT PW+M +++YGF
Sbjct: 26 FYACYLLKSRKTTSSTATYIGSTPHPPRRIRQHN-GEIQGGAWKTRKSRPWEMNMLIYGF 84
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARK---KSKETTYTYCLRLLHIMLQTAPWQRLPLT 119
P+ ++AL+ EWAWQ+P +R + + + S + + + +ML + P+ PL
Sbjct: 85 PSKLAALQAEWAWQNPSRTRHFKTLRDQGIFSSSGKSLKKSILVARLMLSSHPYNLCPLH 144
Query: 120 VQWLKPE 126
V+ E
Sbjct: 145 VKIFTAE 151
>gi|401410146|ref|XP_003884521.1| hypothetical protein NCLIV_049200 [Neospora caninum Liverpool]
gi|325118939|emb|CBZ54491.1| hypothetical protein NCLIV_049200 [Neospora caninum Liverpool]
Length = 765
Score = 88.6 bits (218), Expect = 7e-16, Method: Composition-based stats.
Identities = 42/75 (56%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 3 FHGVYLLYS-RNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYG 61
FH VYLL S +NPRY TY+GY+V P R+KQHN GGA KT PW +VL+V+G
Sbjct: 86 FHCVYLLRSLKNPRY---TYVGYSVHPLNRLKQHNGETAHGGAWKTQRHRPWSLVLVVHG 142
Query: 62 FPNDISALRFEWAWQ 76
FP + AL+FEW WQ
Sbjct: 143 FPTQVGALQFEWRWQ 157
>gi|68478257|ref|XP_716870.1| potential DNA replication structure-specific endonuclease subunit
[Candida albicans SC5314]
gi|68478378|ref|XP_716810.1| potential DNA replication structure-specific endonuclease subunit
[Candida albicans SC5314]
gi|46438494|gb|EAK97824.1| potential DNA replication structure-specific endonuclease subunit
[Candida albicans SC5314]
gi|46438556|gb|EAK97885.1| potential DNA replication structure-specific endonuclease subunit
[Candida albicans SC5314]
gi|238882436|gb|EEQ46074.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 286
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 74/127 (58%), Gaps = 6/127 (4%)
Query: 3 FHGVYLLYS-RNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIV 59
F+GVY+L S PR TYIG T DP RR++QHN GGA++T G PW+MV++V
Sbjct: 16 FYGVYILKSIPKPR---STYIGSTPDPKRRLRQHNGDLKVGGAYRTKKDGSRPWNMVVLV 72
Query: 60 YGFPNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLT 119
YGFP+ I+AL+FE + QH +R + + AR S + +L +I L T + ++ L
Sbjct: 73 YGFPSRIAALQFEHSLQHAYQTRHIDNDARITSSSRQSSIHSKLANIRLLTTSFDKMSLK 132
Query: 120 VQWLKPE 126
+ E
Sbjct: 133 IAIFDEE 139
>gi|66358858|ref|XP_626607.1| holiday junction resolvase, S1x1p, URI domain nuclease
[Cryptosporidium parvum Iowa II]
gi|74777550|sp|Q5CT62.1|SLX1_CRYPI RecName: Full=Structure-specific endonuclease subunit SLX1 homolog
gi|46227695|gb|EAK88615.1| holiday junction resolvase, S1x1p, URI domain nuclease
[Cryptosporidium parvum Iowa II]
Length = 410
Score = 88.6 bits (218), Expect = 8e-16, Method: Composition-based stats.
Identities = 52/147 (35%), Positives = 75/147 (51%), Gaps = 19/147 (12%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
H Y L S + +YIGY+V+P RR++QHN G+ GA KT + PW++ + V GF
Sbjct: 7 LHYCYFLLSEAKK--KASYIGYSVNPCRRLRQHN-GEIKKGAKKTKSGVPWNLGICVGGF 63
Query: 63 PNDISALRFEWAWQHPKMSRRLQH-------VARKKSKETTYTYCLR---------LLHI 106
P+ ++ALRFEWAWQHP + + + V KK+ E R +L
Sbjct: 64 PDRVAALRFEWAWQHPNICKVTRDNIESWKIVKTKKTSENKRILNKRQWSIQQRVSILLC 123
Query: 107 MLQTAPWQRLPLTVQWLKPEYQQVLTE 133
M PW+ + LTV K E + + E
Sbjct: 124 MTTLEPWKNMNLTVFVFKDELENTIKE 150
>gi|409047655|gb|EKM57134.1| hypothetical protein PHACADRAFT_172822 [Phanerochaete carnosa
HHB-10118-sp]
Length = 517
Score = 88.2 bits (217), Expect = 9e-16, Method: Composition-based stats.
Identities = 51/124 (41%), Positives = 67/124 (54%), Gaps = 11/124 (8%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+ YLL S TYIG T P RRI+QHN G+ GA KT PW M +IV GF
Sbjct: 18 FYACYLLRSVKTSKSMATYIGSTPSPPRRIRQHN-GEITQGARKTERNRPWVMQMIVCGF 76
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P+ ++AL+FEWAWQHP +SR H+ R K ++ H M+ + P+ L V+
Sbjct: 77 PSKLAALQFEWAWQHPHISR---HLRRGDGKA-------KVAHGMICSHPYNTWALHVKL 126
Query: 123 LKPE 126
E
Sbjct: 127 FTEE 130
>gi|388853125|emb|CCF53299.1| uncharacterized protein [Ustilago hordei]
Length = 641
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 52/136 (38%), Positives = 72/136 (52%), Gaps = 22/136 (16%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+ Y L R+ G TYIG T P RR +QHN G GA+KT+ PW+M IVYGF
Sbjct: 13 FYACYFL--RSLSSPGITYIGSTPAPPRRKRQHN-GDLTQGAYKTARARPWEMECIVYGF 69
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPL---- 118
P+ I+AL+FEWAW P +SR L+ +A + + + T TA W +PL
Sbjct: 70 PSKIAALQFEWAWAKPNLSRHLKFLATEHTADGVAT----------DTAAWTGMPLFPST 119
Query: 119 -----TVQWLKPEYQQ 129
+W +P+ Q+
Sbjct: 120 SMTPTQTRWGRPKRQR 135
>gi|241955223|ref|XP_002420332.1| DNA replication structure-specific endonuclease subunit, putative
[Candida dubliniensis CD36]
gi|259511395|sp|B9WGW9.1|SLX1_CANDC RecName: Full=Structure-specific endonuclease subunit SLX1
gi|223643674|emb|CAX41407.1| DNA replication structure-specific endonuclease subunit, putative
[Candida dubliniensis CD36]
Length = 286
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 74/127 (58%), Gaps = 6/127 (4%)
Query: 3 FHGVYLLYS-RNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIV 59
F+GVY+L S PR RTYIG T DP RR++QHN GGA++T G PW MV++V
Sbjct: 16 FYGVYILKSIPKPR---RTYIGSTPDPKRRLRQHNGDLKVGGAYRTKKDGSRPWTMVVLV 72
Query: 60 YGFPNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLT 119
+GFP+ I+AL+FE + QH +R + + AR S + +L +I L T + ++ L
Sbjct: 73 HGFPSRIAALQFEHSLQHAYQTRHINNDARITSSSRQSSMHSKLANIRLLTTSFDKMSLK 132
Query: 120 VQWLKPE 126
+ E
Sbjct: 133 IAIFDEE 139
>gi|239612283|gb|EEQ89270.1| GIY-YIG catalytic domain-containing protein [Ajellomyces
dermatitidis ER-3]
Length = 426
Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 56/143 (39%), Positives = 73/143 (51%), Gaps = 26/143 (18%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
F+ YLL R+ YIG T DP RR+ QHN G GGA +TS PW+MV+IV
Sbjct: 15 FYCCYLL--RSTVRHASLYIGSTPDPSRRLAQHN-GDKTGGAKRTSREKLRPWEMVVIVS 71
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRL----------------- 103
GF N + AL+FEWAWQH + SR ++ V R ++E C R
Sbjct: 72 GFMNRVGALQFEWAWQHTQGSRHVE-VERGGNEEPGLRICPRTGKEVKTRGKPRSSLRNI 130
Query: 104 ---LHIMLQTAPWQRLPLTVQWL 123
LHI+LQ+ + PL VQ+
Sbjct: 131 LANLHILLQSPYFSEWPLEVQFF 153
>gi|327353238|gb|EGE82095.1| GIY-YIG catalytic domain-containing protein [Ajellomyces
dermatitidis ATCC 18188]
Length = 426
Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 56/143 (39%), Positives = 73/143 (51%), Gaps = 26/143 (18%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
F+ YLL R+ YIG T DP RR+ QHN G GGA +TS PW+MV+IV
Sbjct: 15 FYCCYLL--RSTVRHASLYIGSTPDPSRRLAQHN-GDKTGGAKRTSREKLRPWEMVVIVS 71
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRL----------------- 103
GF N + AL+FEWAWQH + SR ++ V R ++E C R
Sbjct: 72 GFMNRVGALQFEWAWQHTQGSRHVE-VERGGNEEPGLRICPRTGKEVKTRGKPRSSLRNI 130
Query: 104 ---LHIMLQTAPWQRLPLTVQWL 123
LHI+LQ+ + PL VQ+
Sbjct: 131 LANLHILLQSPYFSEWPLEVQFF 153
>gi|261202490|ref|XP_002628459.1| GIY-YIG catalytic domain-containing protein [Ajellomyces
dermatitidis SLH14081]
gi|239590556|gb|EEQ73137.1| GIY-YIG catalytic domain-containing protein [Ajellomyces
dermatitidis SLH14081]
Length = 426
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 56/146 (38%), Positives = 74/146 (50%), Gaps = 26/146 (17%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
F+ YLL R+ YIG T DP RR+ QHN G GGA +TS PW+MV+IV
Sbjct: 15 FYCCYLL--RSTVRHASLYIGSTPDPSRRLAQHN-GDKTGGAKRTSREKLRPWEMVVIVS 71
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRL----------------- 103
GF N + AL+FEWAWQH + SR ++ V R ++E C R
Sbjct: 72 GFMNRVGALQFEWAWQHTQGSRHVE-VERGGNEEPGLRICPRTGKEVKTRGKPRSSLRNI 130
Query: 104 ---LHIMLQTAPWQRLPLTVQWLKPE 126
LHI+LQ+ + PL VQ+ +
Sbjct: 131 LANLHILLQSPYFSEWPLEVQFFSED 156
>gi|67594835|ref|XP_665907.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656778|gb|EAL35679.1| hypothetical protein Chro.20460, partial [Cryptosporidium hominis]
Length = 233
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 75/147 (51%), Gaps = 19/147 (12%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
H Y L S + +YIGY+V+P RR++QHN G+ GA KT + PW++ + V GF
Sbjct: 7 LHYCYFLLSEAKK--KASYIGYSVNPCRRLRQHN-GEIKKGAKKTKSGVPWNLGICVGGF 63
Query: 63 PNDISALRFEWAWQHPKMSRRLQH-------VARKKSKETTYTYCLR---------LLHI 106
P+ ++ALRFEWAWQHP + + + V KK+ E R +L
Sbjct: 64 PDRVAALRFEWAWQHPNICKVTRENIESWKIVKTKKTSENKRILNKRQWSIQQRVSILLC 123
Query: 107 MLQTAPWQRLPLTVQWLKPEYQQVLTE 133
M PW+ + LTV K E + + E
Sbjct: 124 MTTLEPWKNMNLTVFVFKDELENTIKE 150
>gi|452824922|gb|EME31922.1| endo/excinuclease amino terminal domain-containing protein
[Galdieria sulphuraria]
Length = 384
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Query: 3 FHGVYLL--YSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F+ YLL S +P RTYIG+T +P RR++QHN GGA +T PW MVL ++
Sbjct: 70 FYCCYLLRSLSEHPYGKNRTYIGFTTNPARRLRQHNGDLKAGGALRTKCFRPWQMVLFIH 129
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQHVARKKS 92
GF AL+FEWAWQHP +R L+ V S
Sbjct: 130 GFETKTEALQFEWAWQHPTKTRALKPVNNDSS 161
>gi|302679938|ref|XP_003029651.1| hypothetical protein SCHCODRAFT_59146 [Schizophyllum commune H4-8]
gi|300103341|gb|EFI94748.1| hypothetical protein SCHCODRAFT_59146 [Schizophyllum commune H4-8]
Length = 657
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 52/134 (38%), Positives = 74/134 (55%), Gaps = 9/134 (6%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQH--NKGKDFGGAHKTSNRGPWDMVLIVY 60
F+ YLL S TYIG T +P RRI + N G+ GA KT PW M LIV+
Sbjct: 30 FYACYLLKSIKTPNSKATYIGSTPNPPRRISRSAGNAGELTQGAWKTKRGRPWIMQLIVH 89
Query: 61 GFPNDISALRFEWAWQHPKMSRRL-----QHVARKKSKETTYTYCLRLLHIMLQTAPWQR 115
GFP+ ++AL+FEWAWQHP +SR L Q +A ++K ++ L +M+ + P+
Sbjct: 90 GFPSKLAALQFEWAWQHPHLSRHLKDGSGQPLAAHRNKGIKNN--IQTLLMMITSHPYNL 147
Query: 116 LPLTVQWLKPEYQQ 129
PL V+ E ++
Sbjct: 148 WPLHVKLFTAEAEK 161
>gi|342319183|gb|EGU11133.1| Structure-specific endonuclease subunit SLX1 [Rhodotorula glutinis
ATCC 204091]
Length = 686
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 55/150 (36%), Positives = 72/150 (48%), Gaps = 33/150 (22%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+ YLL S N + TYIG T DP RR KQH G GGA +T PW+M IV+GF
Sbjct: 35 FYACYLLKSYNVKRPNMTYIGSTPDPPRRFKQH-MGDRIGGALQTRFGRPWEMEAIVHGF 93
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVA-------------RKKSKETTYTYC--------- 100
P+ + AL+FEW WQ+P+ SR L+ A K ++TT T
Sbjct: 94 PSKLQALQFEWCWQNPESSRLLRQPAPPPDLNPDADPSLAPKKRKTTSTAPPKTVPQFPR 153
Query: 101 ----------LRLLHIMLQTAPWQRLPLTV 120
+++L ML PW R L+V
Sbjct: 154 RVMSHRALPRIQVLQYMLTVPPWSRFDLSV 183
>gi|402223379|gb|EJU03443.1| hypothetical protein DACRYDRAFT_49905, partial [Dacryopinax sp.
DJM-731 SS1]
Length = 101
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+ YLL S + TYIG T +P RRI+QHN G+ GA KT PW MV+IVYGF
Sbjct: 18 FYACYLLKSLSSPRSRTTYIGSTPNPLRRIRQHN-GELTQGAWKTRQHRPWVMVMIVYGF 76
Query: 63 PNDISALRFEWAWQHPKMSRRLQ 85
P+ + AL+FEWAWQHP++SR ++
Sbjct: 77 PSKLHALQFEWAWQHPEVSRHMR 99
>gi|397625532|gb|EJK67830.1| hypothetical protein THAOC_11076 [Thalassiosira oceanica]
Length = 545
Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 48/133 (36%), Positives = 74/133 (55%), Gaps = 8/133 (6%)
Query: 7 YLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG-PWDMVLIVYGFPND 65
YLL S +P + +TYIG+T +P+RR++QHN GGA +T G PW V +V+GF +
Sbjct: 189 YLLRSLDPGHPLKTYIGFTTNPERRLRQHNGDLKNGGARRTKRAGRPWTFVCVVHGFQDK 248
Query: 66 ISALRFEWAWQHPKMSRRLQ------HVARKKSKETTYTYCLRLLHIML-QTAPWQRLPL 118
I+AL+FEWAWQ+ S+ + + +K + L L I+L + P+ L
Sbjct: 249 INALQFEWAWQNVHKSKTFREAVGDDELCKKMKRRYGPKARLDELRILLTECLPFSLYNL 308
Query: 119 TVQWLKPEYQQVL 131
TV + + +Y V
Sbjct: 309 TVYFPEQKYHDVF 321
>gi|301091067|ref|XP_002895726.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262097044|gb|EEY55096.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 178
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
Query: 1 MVFHGVYLLYSRNP-RYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIV 59
M F YLL P + L +YIG+TV P RRI+QHN G+ GA +T PW+M+ +V
Sbjct: 1 MPFFACYLLTPEQPPQRLRCSYIGFTVSPTRRIRQHN-GELVNGAKRTRKFRPWEMIAVV 59
Query: 60 YGFPNDISALRFEWAWQHPKMSR 82
+GFP+ AL+FEW WQHP++S+
Sbjct: 60 HGFPSKFRALQFEWVWQHPQVSK 82
>gi|324504656|gb|ADY42010.1| Structure-specific endonuclease subunit SLX1 [Ascaris suum]
Length = 215
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Query: 55 MVLIVYGFPNDISALRFEWAWQHPKMSRRLQHVA-RKKSKETTYTYCLRLLHIMLQTAPW 113
MV I++GFPN +SALRFEWAWQ+P SRRL+ + +KK KE+ + + LR+ ML + PW
Sbjct: 1 MVCIIHGFPNSVSALRFEWAWQNPDKSRRLRCLGLKKKQKESAFAFRLRIACHMLNSDPW 60
Query: 114 QRLPLTVQWLKPEYQ 128
+RL LT +WL P +
Sbjct: 61 RRLSLTFRWLLPTSE 75
>gi|240277646|gb|EER41154.1| GIY-YIG catalytic protein [Ajellomyces capsulatus H143]
gi|325093733|gb|EGC47043.1| GIY-YIG catalytic domain-containing protein [Ajellomyces capsulatus
H88]
Length = 421
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 56/152 (36%), Positives = 74/152 (48%), Gaps = 24/152 (15%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
F+ YLL R+ YIG T +P RR+ QHN G GGA KTS+ PW+MV IV
Sbjct: 14 FYCCYLL--RSTVRHASLYIGSTPEPSRRLAQHN-GDRTGGARKTSSEKLRPWEMVAIVS 70
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQ-------------------HVARKKSKETTYTYCL 101
GF N AL+FEWAWQH K SR + V R T+ L
Sbjct: 71 GFMNRAGALQFEWAWQHTKESRHAEVERCESEQLGTRGSSRTGKEVKRAGKPRTSLPNIL 130
Query: 102 RLLHIMLQTAPWQRLPLTVQWLKPEYQQVLTE 133
LHI+L++ + PL V++ + QV ++
Sbjct: 131 ENLHILLRSPYFSEWPLEVRFFSADVWQVWSQ 162
>gi|396497704|ref|XP_003845040.1| similar to GIY-YIG catalytic domain containing protein
[Leptosphaeria maculans JN3]
gi|312221621|emb|CBY01561.1| similar to GIY-YIG catalytic domain containing protein
[Leptosphaeria maculans JN3]
Length = 354
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 77/145 (53%), Gaps = 24/145 (16%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIV 59
F+ YLL S+N + YIG T +P RR+ QHN G GGA +TS +G PW+M IV
Sbjct: 14 AFYCCYLLRSKNRKAF---YIGSTPNPARRLGQHN-GSSKGGAKRTSMQGKRPWEMTCIV 69
Query: 60 YGFPNDISALRFEWAWQHPKMSR---------RLQHVARKKSKET---------TYTYCL 101
GFP+ +AL+FEWAWQ+ +R RL+ + + K K + + L
Sbjct: 70 TGFPSKFAALQFEWAWQNTHATRHIERDVRDARLEELQKGKKKTSPTRRRRPPMSLEARL 129
Query: 102 RLLHIMLQTAPWQRLPLTVQWLKPE 126
+ LH +L + R PL V++ P+
Sbjct: 130 KNLHHLLGVGSFSRWPLNVRFFAPD 154
>gi|170056419|ref|XP_001864021.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167876118|gb|EDS39501.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 66
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/56 (69%), Positives = 48/56 (85%), Gaps = 2/56 (3%)
Query: 3 FHGVYLLYSR--NPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMV 56
F+GVYLL S+ NP++ GRTYIGYTVDP+RRIKQHN G+D GGA +TSNRGPW ++
Sbjct: 10 FYGVYLLVSKSPNPKFGGRTYIGYTVDPNRRIKQHNSGQDGGGAKRTSNRGPWYVI 65
>gi|223995939|ref|XP_002287643.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976759|gb|EED95086.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 774
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 47/133 (35%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
Query: 7 YLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG-PWDMVLIVYGFPND 65
YLL S +P + +TYIG+T P RRI+QHN GGA +T G PW ++ GF +
Sbjct: 381 YLLRSLSPDHPLKTYIGFTTHPSRRIRQHNGILKNGGARRTKRSGRPWTFTCVIAGFQDK 440
Query: 66 ISALRFEWAWQHPKMSRRLQH------VARKKSKETTYTYCLRLLHIMLQTA-PWQRLPL 118
I+AL+FEWAWQ+ S+ + +A+K + L L ++++ P+ L
Sbjct: 441 ITALQFEWAWQNVGRSKCFRDAVGDDALAKKMGRRMGVKARLEELRVLVKACLPFCLYSL 500
Query: 119 TVQWLKPEYQQVL 131
TV + + EYQ++
Sbjct: 501 TVYFPEAEYQEMF 513
>gi|159119740|ref|XP_001710088.1| Hypothetical protein GL50803_16475 [Giardia lamblia ATCC 50803]
gi|259511401|sp|A8B2Z8.1|SLX1_GIAIC RecName: Full=Structure-specific endonuclease subunit SLX1 homolog
gi|157438206|gb|EDO82414.1| hypothetical protein GL50803_16475 [Giardia lamblia ATCC 50803]
Length = 359
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 71/136 (52%), Gaps = 6/136 (4%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
Y L + + R YIG+T +P RRI+QHN+ K GGA KTS GPW MVL V GF
Sbjct: 10 LFACYCLVAESSESPKRCYIGFTNNPLRRIRQHNR-KIAGGARKTSRYGPWRMVLFVGGF 68
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSK-----ETTYTYCLRLLHIMLQTAPWQRLP 117
+SAL+FE+ W +P SR + ++ K + + L +L +L P+ P
Sbjct: 69 STKVSALKFEYIWTYPTRSRYVNCISATSQKLRLACPRSISTALDVLVTLLIHPPFSLQP 128
Query: 118 LTVQWLKPEYQQVLTE 133
L V L E +V ++
Sbjct: 129 LYVVLLDAEGNRVKSQ 144
>gi|209882697|ref|XP_002142784.1| GIY-YIG catalytic domain-containing protein [Cryptosporidium muris
RN66]
gi|209558390|gb|EEA08435.1| GIY-YIG catalytic domain-containing protein [Cryptosporidium muris
RN66]
Length = 386
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 73/132 (55%), Gaps = 18/132 (13%)
Query: 4 HGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFP 63
H YLL S + + +YIGYTV+P RR++QHN G+ GA KT + PW M + + GFP
Sbjct: 14 HFCYLLLSESKK--KASYIGYTVNPVRRLRQHN-GEIKKGAKKTKSGIPWYMAICIDGFP 70
Query: 64 NDISALRFEWAWQHPKMSRR---------LQHVARKKS------KETTYTYCLRLLHIML 108
N I+ALRFEW WQHP + + + V++K K+ + + +L M+
Sbjct: 71 NRIAALRFEWVWQHPHICKATRSQIIVWGITKVSKKSGKFILNRKQWSVQQRIGILLCMV 130
Query: 109 QTAPWQRLPLTV 120
PW ++ L++
Sbjct: 131 SIEPWCKMNLSI 142
>gi|452982250|gb|EME82009.1| hypothetical protein MYCFIDRAFT_99264, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 322
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 59/90 (65%), Gaps = 5/90 (5%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIV 59
F+ YLL R+ TYIG T +P RR++QHN G+ GGA +TS PW+M +V
Sbjct: 4 AFYACYLL--RSIARHSSTYIGSTPNPPRRLRQHN-GESKGGAVRTSRDSLRPWEMTCLV 60
Query: 60 YGFPNDISALRFEWAWQHPKMSRRLQHVAR 89
GFP+ I+AL+FEWAWQ+P M+R ++ +R
Sbjct: 61 TGFPSKIAALQFEWAWQNPNMTRHIEASSR 90
>gi|365761944|gb|EHN03564.1| Slx1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 304
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 77/133 (57%), Gaps = 7/133 (5%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
F+ YLL S N R YIG T +P RR++QHN GGA++T G PW+M++IV
Sbjct: 13 FYCCYLLQSINKRQ--SFYIGSTPNPIRRLRQHNGKLTVGGAYRTKRDGSRPWEMIMIVQ 70
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQH---VARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFP+ I+AL+FE AWQH + + + + K+ T + + L+ ++L+ +QR+
Sbjct: 71 GFPSKIAALQFEHAWQHGYQTHYIAEKDRIVKHKAGGRTLHHKVALMKLLLKHEFFQRMN 130
Query: 118 LTVQWLKPEYQQV 130
LTV+ + Q+
Sbjct: 131 LTVEIFNLKGSQI 143
>gi|401839635|gb|EJT42768.1| SLX1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 304
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 77/133 (57%), Gaps = 7/133 (5%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
F+ YLL S N R YIG T +P RR++QHN GGA++T G PW+M++IV
Sbjct: 13 FYCCYLLQSINKRQ--SFYIGSTPNPIRRLRQHNGKLTVGGAYRTKRDGSRPWEMIMIVQ 70
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQH---VARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFP+ I+AL+FE AWQH + + + + K+ T + + L+ ++L+ +QR+
Sbjct: 71 GFPSKIAALQFEHAWQHGYQTHYIAEKDRIVKHKAGGRTLHHKVALMKLLLKHEFFQRMN 130
Query: 118 LTVQWLKPEYQQV 130
LTV+ + Q+
Sbjct: 131 LTVEMFNLKGSQI 143
>gi|259511308|sp|C0NTM8.1|SLX1_AJECG RecName: Full=Structure-specific endonuclease subunit SLX1
gi|225557102|gb|EEH05389.1| GIY-YIG catalytic domain-containing protein [Ajellomyces capsulatus
G186AR]
Length = 421
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 56/152 (36%), Positives = 73/152 (48%), Gaps = 24/152 (15%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
F+ YLL R+ YIG T +P RR+ QHN G GGA KTS+ PW+MV IV
Sbjct: 14 FYCCYLL--RSTVRHASLYIGSTPEPSRRLAQHN-GDRTGGARKTSSEKLRPWEMVAIVS 70
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQ-------------------HVARKKSKETTYTYCL 101
GF N AL+FEWAWQH K SR + V R T+ L
Sbjct: 71 GFTNRAGALQFEWAWQHTKESRHAEVERCESEQLGTRGSSRTGKEVKRAGKPRTSLPNIL 130
Query: 102 RLLHIMLQTAPWQRLPLTVQWLKPEYQQVLTE 133
LHI+L++ + PL V + + QV ++
Sbjct: 131 ENLHILLRSPYFSEWPLEVWFFSADVWQVWSQ 162
>gi|403170047|ref|XP_003329451.2| hypothetical protein PGTG_11201 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375168542|gb|EFP85032.2| hypothetical protein PGTG_11201 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 492
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 75/155 (48%), Gaps = 41/155 (26%)
Query: 2 VFHGVYLLYS-----RNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMV 56
F+ YLL S RN RTY+G T +P RRI+QHN G+ GGA +T PW+M
Sbjct: 29 AFYACYLLRSYYKGKRN----ERTYVGSTPNPPRRIRQHN-GELKGGAVRTKYYRPWEME 83
Query: 57 LIVYGFPNDISALRFEWAWQHPKMSRRLQHV--ARKKSKETTYTYC-------------- 100
LI YGFP+ + AL+FEWAW P SR LQ V ++ SK+T
Sbjct: 84 LICYGFPSKLVALQFEWAWNTPYKSRHLQAVKPTKEDSKQTELDSTGAIAGKAPTATQTK 143
Query: 101 ---------------LRLLHIMLQTAPWQRLPLTV 120
L++L M+ T PW + PL V
Sbjct: 144 KPMFPRSTGNRVEVKLKVLRKMMTTLPWSQYPLKV 178
>gi|355690189|gb|AER99074.1| GIY-YIG domain containing 2 isoform 1 [Mustela putorius furo]
Length = 71
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 48/59 (81%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYG 61
F GVYLLY NPR+ GR Y+G+TV+P RR++QHN G+ GGA +TS RGPW+MVL+V+G
Sbjct: 13 FFGVYLLYCLNPRHRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGRGPWEMVLLVHG 71
>gi|344301618|gb|EGW31923.1| hypothetical protein SPAPADRAFT_50535 [Spathaspora passalidarum
NRRL Y-27907]
Length = 292
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 74/128 (57%), Gaps = 7/128 (5%)
Query: 3 FHGVYLLYS-RNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIV 59
F+ VYLL S PR Y+G T D RR++QHN GGA +T +G PW +V IV
Sbjct: 9 FYCVYLLQSIPKPRTF---YVGSTPDMKRRLRQHNGDLKAGGAFRTKRKGSRPWKVVTIV 65
Query: 60 YGFPNDISALRFEWAWQHPKMSRRLQHVAR-KKSKETTYTYCLRLLHIMLQTAPWQRLPL 118
Y FP+ ISAL+FE + QHP+ +RR+ H R KS+ T+ L + +++ + + R+ L
Sbjct: 66 YNFPSRISALQFEHSLQHPQFTRRISHDDRVSKSQSTSLHQRLANIKLLITSPGFVRMDL 125
Query: 119 TVQWLKPE 126
V+ E
Sbjct: 126 KVKIFDDE 133
>gi|449015588|dbj|BAM78990.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 331
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 68/123 (55%), Gaps = 8/123 (6%)
Query: 6 VYLLYSR--NPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFP 63
YLL S + R RTYIG+T DP RR++QHN GAH+T PW +++ V GF
Sbjct: 49 CYLLVSESTDKRARNRTYIGFTTDPSRRLRQHNGELKGAGAHRTRAFRPWRLLIFVEGFR 108
Query: 64 NDISALRFEWAWQHPKMSR-RLQHVARKKSKETT---YTYCLRL--LHIMLQTAPWQRLP 117
+ + AL+FEW WQHP+ SR + QH A S+ + Y RL L +L PW +
Sbjct: 109 SQVQALQFEWQWQHPRNSRTQRQHQAGLGSETSIKQPYGIAGRLQVLARLLAMRPWCCIA 168
Query: 118 LTV 120
L V
Sbjct: 169 LRV 171
>gi|308161733|gb|EFO64169.1| GIY-YIG domain containing protein [Giardia lamblia P15]
Length = 359
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 69/133 (51%), Gaps = 6/133 (4%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
Y L + + R YIG+T +P RRI+QHN+ K GGA KTS GPW MVL V GF
Sbjct: 10 LFACYCLVTESLESPKRCYIGFTNNPLRRIRQHNR-KIAGGARKTSRYGPWRMVLFVGGF 68
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSK-----ETTYTYCLRLLHIMLQTAPWQRLP 117
ISAL+FE+ W +P SR + ++ K + + L +L +L P+ P
Sbjct: 69 STKISALKFEYIWTYPTRSRYVNCISATSQKLRLACPRSISTALDVLVTLLIHPPFSLQP 128
Query: 118 LTVQWLKPEYQQV 130
L V L E ++
Sbjct: 129 LYVVLLDDEGTKI 141
>gi|385302586|gb|EIF46711.1| putative dna replication structure-specific endonuclease subunit
[Dekkera bruxellensis AWRI1499]
Length = 310
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 74/136 (54%), Gaps = 10/136 (7%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
+GVYLL R+ R YIG T DP RR++QHN GGA++T G PW MVL VY
Sbjct: 4 LYGVYLL--RSLRKKNSFYIGSTPDPYRRLRQHNGELTRGGAYRTXRNGFRPWKMVLFVY 61
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQHVARKKSKE------TTYTYCLRLLHIMLQTAPWQ 114
GFP+++SAL+FE AWQH +R + R+ + + T+ J ++L + ++
Sbjct: 62 GFPSNVSALQFEHAWQHAYQTRHIPVCKRRHNGKRHTGSGTSVDEKJANCRLLLCSDSFK 121
Query: 115 RLPLTVQWLKPEYQQV 130
RL + E QV
Sbjct: 122 RLGXQIAVFDKEIYQV 137
>gi|451853886|gb|EMD67179.1| hypothetical protein COCSADRAFT_285650 [Cochliobolus sativus
ND90Pr]
Length = 368
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 75/145 (51%), Gaps = 24/145 (16%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIV 59
F+ YLL S+N + YIG T +P RR+ QHN G GGA +TS +G PW+M IV
Sbjct: 14 AFYCCYLLRSKNRKAF---YIGSTPNPARRLGQHN-GSTKGGAKRTSMQGKRPWEMTCIV 69
Query: 60 YGFPNDISALRFEWAWQHPKMSRRLQHVARKKSKETTY------------------TYCL 101
GFP++ +AL+FEWAWQ+ +R ++ R ++ Y L
Sbjct: 70 TGFPSNSAALQFEWAWQNTHATRHIERDVRDARRDELYKGKKNASPAKRPRPPMSLEARL 129
Query: 102 RLLHIMLQTAPWQRLPLTVQWLKPE 126
+ LH +L + R PL +++ P+
Sbjct: 130 KNLHHLLGVGSFSRWPLHIRFFAPD 154
>gi|317032048|ref|XP_001393894.2| structure-specific endonuclease subunit slx1 [Aspergillus niger CBS
513.88]
Length = 407
Score = 82.8 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 52/144 (36%), Positives = 78/144 (54%), Gaps = 19/144 (13%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTS--NRGPWDMVLIVY 60
++ YLL S R YIG T P RR+ QHN G+ GGA KT+ ++ PW+MVL+V
Sbjct: 15 YYCCYLLRSTKQR--TSLYIGSTPHPARRLAQHN-GESKGGARKTAKDDKRPWEMVLLVE 71
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQHVA------------RKKSKETTYTYCLRLLHIML 108
GF + + AL+FEWAWQ+P+MS QH A R + + L LH+ L
Sbjct: 72 GFTSRVGALQFEWAWQNPRMSS--QHPANRHHTEAGKAKHRGRGSRRSLKAHLEDLHLFL 129
Query: 109 QTAPWQRLPLTVQWLKPEYQQVLT 132
++ + + PL +++ + Q+ T
Sbjct: 130 RSTYFSKWPLRLRFFNRDVYQLWT 153
>gi|407925804|gb|EKG18784.1| Excinuclease ABC C subunit [Macrophomina phaseolina MS6]
Length = 433
Score = 82.8 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 55/151 (36%), Positives = 81/151 (53%), Gaps = 27/151 (17%)
Query: 3 FHGVYLLYSR-NPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIV 59
F+ YLL S RYL Y+G T +P RR+KQHN G+ GGA +TS PW+M IV
Sbjct: 8 FYCCYLLRSTVRHRYL---YVGSTPNPVRRLKQHN-GQAKGGAARTSRVSLQPWEMACIV 63
Query: 60 YGFPNDISALRFEWAWQHPKMSRRL------------------QHVARKKSKETTYTYCL 101
GFP+ I+AL+FEWAWQ+ ++R + ARK+S +
Sbjct: 64 TGFPSKIAALQFEWAWQNTHLTRHIPAEDRITATRTTTRVDPRTGKARKRSVRPQLSLTD 123
Query: 102 RL--LHIMLQTAPWQRLPLTVQWLKPEYQQV 130
R+ LH++L+ ++R PL+V + + +V
Sbjct: 124 RIANLHLLLRVKSFERWPLSVTFFAEDVHRV 154
>gi|189210086|ref|XP_001941375.1| GIY-YIG catalytic domain containing protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|259511447|sp|B2WM34.1|SLX1_PYRTR RecName: Full=Structure-specific endonuclease subunit slx1
gi|187977468|gb|EDU44094.1| GIY-YIG catalytic domain containing protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 364
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 75/145 (51%), Gaps = 24/145 (16%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIV 59
F+ YLL S+N + YIG T +P RR+ QHN G GGA +TS +G PW+M IV
Sbjct: 14 AFYCCYLLRSKNRKAF---YIGSTPNPARRLGQHN-GSSKGGAKRTSMQGKRPWEMTCIV 69
Query: 60 YGFPNDISALRFEWAWQHPKMSRRLQHVARKKSKET------------------TYTYCL 101
GFP+ +AL+FEWAWQ+ +R ++ R+ K+ + L
Sbjct: 70 TGFPSRFAALQFEWAWQNTHATRHIERDVREARKDELEKGRKNASPVKRSRPPMSLEARL 129
Query: 102 RLLHIMLQTAPWQRLPLTVQWLKPE 126
+ LH +L + R PL V++ P+
Sbjct: 130 KNLHHLLGVGSFSRWPLHVRFFAPD 154
>gi|317148346|ref|XP_001822706.2| structure-specific endonuclease subunit slx1 [Aspergillus oryzae
RIB40]
Length = 401
Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 56/140 (40%), Positives = 75/140 (53%), Gaps = 15/140 (10%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSN-RGPWDMVLIVYG 61
F+ YLL R+ YIG T P RR+ QHN G GGA KT+N + PW+MVLIV G
Sbjct: 15 FYCCYLL--RSTVRQTSLYIGSTPHPSRRLAQHN-GVSRGGARKTANDKRPWEMVLIVEG 71
Query: 62 FPNDISALRFEWAWQHPKMSRRL-----QHVARKKSK------ETTYTYCLRLLHIMLQT 110
F + +AL+FEWAWQ P SR L AR+K K + L LH +L++
Sbjct: 72 FMSRTAALQFEWAWQKPGKSRHLGDDDNTESAREKGKTRPRGPARSLKGHLENLHALLRS 131
Query: 111 APWQRLPLTVQWLKPEYQQV 130
+ LPL V++ + Q+
Sbjct: 132 TYFSGLPLRVRFFADDVHQL 151
>gi|452841483|gb|EME43420.1| hypothetical protein DOTSEDRAFT_174260 [Dothistroma septosporum
NZE10]
Length = 405
Score = 82.0 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 53/153 (34%), Positives = 79/153 (51%), Gaps = 31/153 (20%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
F+ YLL R+ YIG T +P RR+KQHN G GGA +TS PW++ +V
Sbjct: 11 FYACYLL--RSIARHSSLYIGSTPNPPRRLKQHN-GDAGGGAKRTSKDSLRPWEISCLVT 67
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQHVA---------------------RKKSKETTYTY 99
GFP+ I+AL+FEWAWQ+P ++R H+A RK+S +
Sbjct: 68 GFPSKIAALQFEWAWQNPNLTR---HIAPDNRITQTKMTSRISPKTGRVRKRSARPRLSL 124
Query: 100 CLRL--LHIMLQTAPWQRLPLTVQWLKPEYQQV 130
RL LH++L+ ++R PL + + + +V
Sbjct: 125 TDRLANLHLLLRANSFERWPLKLTFYSEDVHRV 157
>gi|323356156|gb|EGA87961.1| Slx1p [Saccharomyces cerevisiae VL3]
Length = 304
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 72/123 (58%), Gaps = 7/123 (5%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
F+ YLL S N R Y+G T +P RR++QHN GGA++T G PW+M++IV
Sbjct: 13 FYCCYLLQSINKRQ--SFYVGSTPNPVRRLRQHNGKLAVGGAYRTKRDGSRPWEMIMIVR 70
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQH---VARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFPN I+AL+FE AWQH + + V + K+ T + + L+ ++L+ +QR+
Sbjct: 71 GFPNKIAALQFEHAWQHGYQTHYIAEKDRVVKHKAGGRTLHHKVALMKLLLKHEFFQRMN 130
Query: 118 LTV 120
L V
Sbjct: 131 LIV 133
>gi|366996066|ref|XP_003677796.1| hypothetical protein NCAS_0H01370 [Naumovozyma castellii CBS 4309]
gi|342303666|emb|CCC71447.1| hypothetical protein NCAS_0H01370 [Naumovozyma castellii CBS 4309]
Length = 307
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 74/133 (55%), Gaps = 7/133 (5%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
F+ YLL S + R YIG T DP +R++QHN GGA++T G PW+M+ IVY
Sbjct: 15 FYCCYLLQSISKRQ--SFYIGSTPDPPKRLRQHNGILSKGGAYRTRREGSRPWEMICIVY 72
Query: 61 GFPNDISALRFEWAWQHPKMS---RRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFPN ISAL+FE AWQH + + + + K+ T + L L+ ++ +Q +
Sbjct: 73 GFPNKISALQFEHAWQHGYQTHYIKAADRIVQNKNGGRTIHHKLVLIRQLINNVFFQYMN 132
Query: 118 LTVQWLKPEYQQV 130
L V + + ++V
Sbjct: 133 LQVHFFNDDTRRV 145
>gi|401626758|gb|EJS44680.1| slx1p [Saccharomyces arboricola H-6]
Length = 304
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 74/124 (59%), Gaps = 7/124 (5%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
F+ YLL S N R YIG T +P RR++QHN GGA++T G PW+M++IV
Sbjct: 13 FYCCYLLQSINKRQ--SFYIGSTPNPVRRLRQHNGKLTVGGAYRTKRDGSRPWEMIMIVR 70
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQH---VARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFP+ I+AL+FE AWQH + + + + K+ T + + L+ ++L+ ++R+
Sbjct: 71 GFPSKIAALQFEHAWQHGYQTHYIAETDRIVKHKAGGRTLHHKIALIKLLLRHEFFERMN 130
Query: 118 LTVQ 121
LTV+
Sbjct: 131 LTVE 134
>gi|255732047|ref|XP_002550947.1| hypothetical protein CTRG_05245 [Candida tropicalis MYA-3404]
gi|240131233|gb|EER30793.1| hypothetical protein CTRG_05245 [Candida tropicalis MYA-3404]
Length = 273
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 72/121 (59%), Gaps = 9/121 (7%)
Query: 3 FHGVYLLYS-RNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIV 59
F+GVY+L S PR TYIG T DP RR++QHN GGA++T G PW M+++V
Sbjct: 17 FYGVYILQSIPKPR---STYIGSTPDPRRRLRQHNGDLKVGGAYRTKRPGCRPWKMIVLV 73
Query: 60 YGFPNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLT 119
+GFP+ +SAL+FE A QH +R H+ + K + + L + ++L + + R+ L
Sbjct: 74 HGFPSRVSALQFEHALQHSYQTR---HITEQVGKSLSISKKLTNVKLLLSSPSFIRMGLE 130
Query: 120 V 120
V
Sbjct: 131 V 131
>gi|50292185|ref|XP_448525.1| hypothetical protein [Candida glabrata CBS 138]
gi|74608975|sp|Q6FML9.1|SLX1_CANGA RecName: Full=Structure-specific endonuclease subunit SLX1
gi|49527837|emb|CAG61486.1| unnamed protein product [Candida glabrata]
Length = 312
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 78/133 (58%), Gaps = 7/133 (5%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
F+G YLL S + R YIG T +P RR++QHN GGA++T G PW+MV IVY
Sbjct: 10 FYGCYLLQSISKR--QSFYIGSTPNPVRRLRQHNGSLSRGGAYRTKRDGTRPWEMVAIVY 67
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQH---VARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFP+ I+AL+FE AWQH +R ++ V + + + + L ++ +L+ ++ +
Sbjct: 68 GFPSRIAALQFEHAWQHGYQTRYIKSQDRVVKTRKGGRSIHHKLAMITSLLKNEYFRYMD 127
Query: 118 LTVQWLKPEYQQV 130
LT+ + + +++
Sbjct: 128 LTLHFFNQKVEEI 140
>gi|410081618|ref|XP_003958388.1| hypothetical protein KAFR_0G02190 [Kazachstania africana CBS
2517]
gi|372464976|emb|CCF59253.1| hypothetical protein KAFR_0G02190 [Kazachstania africana CBS
2517]
Length = 300
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 54/82 (65%), Gaps = 4/82 (4%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
F+ YLL S N R YIG T +P RR++QHN GGA++T G PW+MV IVY
Sbjct: 7 FYCCYLLQSINKR--QSFYIGSTPNPARRLRQHNGDLTNGGAYRTKKLGARPWEMVAIVY 64
Query: 61 GFPNDISALRFEWAWQHPKMSR 82
GFPN+I+AL+FE AWQH +R
Sbjct: 65 GFPNNIAALQFEHAWQHGYKTR 86
>gi|398392844|ref|XP_003849881.1| hypothetical protein MYCGRDRAFT_87006 [Zymoseptoria tritici IPO323]
gi|339469759|gb|EGP84857.1| hypothetical protein MYCGRDRAFT_87006 [Zymoseptoria tritici IPO323]
Length = 406
Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 53/146 (36%), Positives = 77/146 (52%), Gaps = 31/146 (21%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
F+ YLL R+ TYIG T +P RR+KQHN G+ GGA +TS PW+M +V
Sbjct: 11 FYACYLL--RSIARHSSTYIGSTPNPPRRLKQHN-GEAKGGAVRTSRDTLRPWEMTCLVT 67
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQHVA---------------------RKKSKETTYTY 99
GFP+ I+AL+FEWAWQ+P ++R H+A RK++
Sbjct: 68 GFPSKIAALQFEWAWQNPNLTR---HIAVDSRITQTKMKTRISPKSGKMRKRAARPRLCL 124
Query: 100 CLRL--LHIMLQTAPWQRLPLTVQWL 123
RL LH++L+ ++R PL + +
Sbjct: 125 TDRLANLHLLLRAKSFERWPLKLTFF 150
>gi|341894767|gb|EGT50702.1| hypothetical protein CAEBREN_14278 [Caenorhabditis brenneri]
Length = 1153
Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/66 (54%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 35 HNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKMSRRLQHVARKKS-K 93
HN G+ GGA KT +RGPWD+V +V+GFPN ++ALRFE AWQ+P +S+ L+ KK K
Sbjct: 943 HNGGRFKGGAKKTDSRGPWDIVCVVHGFPNHVAALRFEGAWQNPAVSKSLKEKQLKKERK 1002
Query: 94 ETTYTY 99
ET + Y
Sbjct: 1003 ETPFAY 1008
>gi|259511470|sp|A6RYJ8.2|SLX1_BOTFB RecName: Full=Structure-specific endonuclease subunit slx1
Length = 425
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 76/143 (53%), Gaps = 18/143 (12%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTS--NRGPWDMVLIVY 60
F+G YLL R+ Y+G T +P RR++QHN G GGA +TS N PW+M IV
Sbjct: 15 FYGCYLL--RSTIRHSALYVGSTPNPVRRLRQHN-GLVKGGAVRTSRGNLRPWEMACIVT 71
Query: 61 GFPNDISALRFE-WAWQHPKM------SRRLQHVARKKSK------ETTYTYCLRLLHIM 107
GFP I+AL+F+ WAWQ+P + S R+ H +KK T L LHI+
Sbjct: 72 GFPTSIAALQFDRWAWQNPHITLHIPPSSRISHATQKKRSGHPKRPRHTLQSLLSNLHIL 131
Query: 108 LQTAPWQRLPLTVQWLKPEYQQV 130
L + R PL +++ P+ +
Sbjct: 132 LTVPSFSRWPLEIKFFAPDVHRA 154
>gi|443899495|dbj|GAC76826.1| GIY-YIG type nuclease [Pseudozyma antarctica T-34]
Length = 636
Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 50/124 (40%), Positives = 67/124 (54%), Gaps = 4/124 (3%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+ Y L R+ G TYIG T P RR +QHN G GA KT+ PW+M IVYGF
Sbjct: 13 FYACYFL--RSLSSPGITYIGSTPAPPRRKRQHN-GDLTQGAWKTARSRPWEMECIVYGF 69
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
+ I+AL+FEWAW P +SR L+ +A + S T L+ + L + P +W
Sbjct: 70 SSKIAALQFEWAWAKPHLSRHLKFLASECSASGMRTDTTALVGMPLFPSS-SMTPGQTKW 128
Query: 123 LKPE 126
KP+
Sbjct: 129 GKPK 132
>gi|67902450|ref|XP_681481.1| hypothetical protein AN8212.2 [Aspergillus nidulans FGSC A4]
gi|74593034|sp|Q5AU18.1|SLX1_EMENI RecName: Full=Structure-specific endonuclease subunit slx1
gi|40739591|gb|EAA58781.1| hypothetical protein AN8212.2 [Aspergillus nidulans FGSC A4]
gi|259480990|tpe|CBF74120.1| TPA: GIY-YIG catalytic domain containing protein (AFU_orthologue;
AFUA_5G03450) [Aspergillus nidulans FGSC A4]
Length = 409
Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/79 (50%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSN--RGPWDMVLIVYGFPNDISALRFEWAWQHP 78
YIG T DP RR+ QHN G GGA +T++ R PW+MV++V GF + I+AL+FEWAWQHP
Sbjct: 11 YIGSTPDPARRLAQHN-GLCKGGARRTADEKRRPWEMVMVVEGFMSKIAALQFEWAWQHP 69
Query: 79 KMSRRLQHVARKKSKETTY 97
+R L A K + T+
Sbjct: 70 AATRHLTADAPSKEQSKTH 88
>gi|259511489|sp|Q0UAL6.3|SLX1_PHANO RecName: Full=Structure-specific endonuclease subunit SLX1
Length = 366
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 76/147 (51%), Gaps = 26/147 (17%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIV 59
F+ YLL S+N + YIG T +P RR+ QHN G GGA +TS +G PW+M IV
Sbjct: 14 AFYCCYLLRSKNRKSY---YIGSTPNPARRLGQHN-GSSKGGAKRTSMQGKRPWEMTCIV 69
Query: 60 YGFPNDISALRFEWAWQHPKMSR---------RLQHVARKKSKET-----------TYTY 99
GFP+ +AL+FEWAWQ+ +R R + + + K K T +
Sbjct: 70 TGFPSKFAALQFEWAWQNTHATRHIDKDVRDARAEELQKGKKKATSPGRRRKRPPMSLEA 129
Query: 100 CLRLLHIMLQTAPWQRLPLTVQWLKPE 126
L+ LH +L + R PL +++ P+
Sbjct: 130 RLKNLHHLLSVDSFCRWPLNLRFFAPD 156
>gi|71006676|ref|XP_758004.1| hypothetical protein UM01857.1 [Ustilago maydis 521]
gi|74703277|sp|Q4PDF6.1|SLX1_USTMA RecName: Full=Structure-specific endonuclease subunit SLX1
gi|46097505|gb|EAK82738.1| hypothetical protein UM01857.1 [Ustilago maydis 521]
Length = 658
Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/94 (46%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+ Y L R+ G TYIG T P RR +QHN G GA+KTS PW+M IVYGF
Sbjct: 13 FYACYFL--RSLSTPGTTYIGSTPAPPRRKRQHN-GHLTQGAYKTSRARPWEMECIVYGF 69
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETT 96
+ I+AL+FEWAW P +SR L+ + + S + T
Sbjct: 70 SSKIAALQFEWAWAKPHLSRHLKFLTTEHSVDGT 103
>gi|330916233|ref|XP_003297344.1| hypothetical protein PTT_07708 [Pyrenophora teres f. teres 0-1]
gi|311330038|gb|EFQ94562.1| hypothetical protein PTT_07708 [Pyrenophora teres f. teres 0-1]
Length = 367
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 74/145 (51%), Gaps = 24/145 (16%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIV 59
F+ YLL S+N YIG T P RR+ QHN G GGA +TS +G PW+M IV
Sbjct: 14 AFYCCYLLRSKNRNAF---YIGSTPSPARRLGQHN-GSSTGGAKRTSMQGKRPWEMTCIV 69
Query: 60 YGFPNDISALRFEWAWQHPKMSRRLQ-----------HVARKKSKET-------TYTYCL 101
GFP+ +AL+FEWAWQ+ +R ++ H ARK + + L
Sbjct: 70 TGFPSRFAALQFEWAWQNTHATRHIERHVREARKDELHKARKNASPVRRSRPPMSLEARL 129
Query: 102 RLLHIMLQTAPWQRLPLTVQWLKPE 126
+ LH +L + R PL +++ P+
Sbjct: 130 KNLHHLLGVGSFSRWPLHLRFFAPD 154
>gi|169616053|ref|XP_001801442.1| hypothetical protein SNOG_11198 [Phaeosphaeria nodorum SN15]
gi|160703102|gb|EAT81697.2| hypothetical protein SNOG_11198 [Phaeosphaeria nodorum SN15]
Length = 313
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 76/147 (51%), Gaps = 26/147 (17%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIV 59
F+ YLL S+N + YIG T +P RR+ QHN G GGA +TS +G PW+M IV
Sbjct: 14 AFYCCYLLRSKNRKSY---YIGSTPNPARRLGQHN-GSSKGGAKRTSMQGKRPWEMTCIV 69
Query: 60 YGFPNDISALRFEWAWQHPKMSR---------RLQHVARKKSKET-----------TYTY 99
GFP+ +AL+FEWAWQ+ +R R + + + K K T +
Sbjct: 70 TGFPSKFAALQFEWAWQNTHATRHIDKDVRDARAEELQKGKKKATSPGRRRKRPPMSLEA 129
Query: 100 CLRLLHIMLQTAPWQRLPLTVQWLKPE 126
L+ LH +L + R PL +++ P+
Sbjct: 130 RLKNLHHLLSVDSFCRWPLNLRFFAPD 156
>gi|259511453|sp|A6ZLG6.1|SLX1_YEAS7 RecName: Full=Structure-specific endonuclease subunit SLX1
gi|151946613|gb|EDN64835.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|349576602|dbj|GAA21773.1| K7_Slx1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 304
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 73/124 (58%), Gaps = 7/124 (5%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
F+ YLL S N R Y+G T +P RR++QHN GGA++T G PW+M++IV
Sbjct: 13 FYCCYLLQSINKRQ--SFYVGSTPNPVRRLRQHNGKLAVGGAYRTKRDGSRPWEMIMIVR 70
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQH---VARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFP+ I+AL+FE AWQH + + V + K+ T + + L+ ++L+ +QR+
Sbjct: 71 GFPSKIAALQFEHAWQHGYQTHYIAEKDRVVKHKAGGRTLHHKVALMKLLLKHEFFQRMN 130
Query: 118 LTVQ 121
L V+
Sbjct: 131 LIVE 134
>gi|398365607|ref|NP_009787.3| Slx1p [Saccharomyces cerevisiae S288c]
gi|586345|sp|P38324.1|SLX1_YEAST RecName: Full=Structure-specific endonuclease subunit SLX1;
AltName: Full=Synthetic lethal of unknown function
protein 1
gi|536624|emb|CAA85191.1| unnamed protein product [Saccharomyces cerevisiae]
gi|285810558|tpg|DAA07343.1| TPA: Slx1p [Saccharomyces cerevisiae S288c]
Length = 304
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 73/124 (58%), Gaps = 7/124 (5%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
F+ YLL S N R Y+G T +P RR++QHN GGA++T G PW+M++IV
Sbjct: 13 FYCCYLLQSINKRQ--SFYVGSTPNPVRRLRQHNGKLAVGGAYRTKRDGSRPWEMIMIVR 70
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQH---VARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFP+ I+AL+FE AWQH + + V + K+ T + + L+ ++L+ +QR+
Sbjct: 71 GFPSKIAALQFEHAWQHGYQTHYIAEKDRVVKHKAGGRTLHHKVALMKLLLKHEFFQRMN 130
Query: 118 LTVQ 121
L V+
Sbjct: 131 LIVE 134
>gi|294655202|ref|XP_457305.2| DEHA2B08030p [Debaryomyces hansenii CBS767]
gi|259511468|sp|Q6BWW4.2|SLX1_DEBHA RecName: Full=Structure-specific endonuclease subunit SLX1
gi|199429766|emb|CAG85309.2| DEHA2B08030p [Debaryomyces hansenii CBS767]
Length = 346
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 74/130 (56%), Gaps = 9/130 (6%)
Query: 3 FHGVYLLYSR-NPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIV 59
F+GVYLL S P+ YIG T +P RR++QHN GGA++T G PW+M+ +V
Sbjct: 23 FYGVYLLRSVPKPKSF---YIGSTPNPQRRLRQHNGELKNGGAYRTKKSGFRPWEMICLV 79
Query: 60 YGFPNDISALRFEWAWQHPKMSRRLQH---VARKKSKETTYTYCLRLLHIMLQTAPWQRL 116
Y FP+ AL+FE A QHP +R ++ + K++ T + L + ++L ++ + R+
Sbjct: 80 YNFPSKNVALQFEHALQHPYQTRHIKSELRITHKRNSGNTLHHKLGNIRLLLGSSFFSRM 139
Query: 117 PLTVQWLKPE 126
L V PE
Sbjct: 140 GLKVLLFDPE 149
>gi|451993660|gb|EMD86132.1| hypothetical protein COCHEDRAFT_1185965 [Cochliobolus
heterostrophus C5]
gi|451999806|gb|EMD92268.1| hypothetical protein COCHEDRAFT_1193777 [Cochliobolus
heterostrophus C5]
Length = 368
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 59/98 (60%), Gaps = 6/98 (6%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIV 59
F+ YLL S+N + YIG T +P RR+ QHN G GGA +TS +G PW+M IV
Sbjct: 14 AFYCCYLLRSKNRKAF---YIGSTPNPARRLGQHN-GSTKGGAKRTSMQGKRPWEMTCIV 69
Query: 60 YGFPNDISALRFEWAWQHPKMSRRLQHVARKKSKETTY 97
GFP+ +AL+FEWAWQ+ +R ++ R ++ Y
Sbjct: 70 TGFPSKSAALQFEWAWQNTHATRHIERDVRDARRDELY 107
>gi|150866688|ref|XP_001386362.2| hypothetical protein PICST_90954 [Scheffersomyces stipitis CBS
6054]
gi|259511463|sp|A3LZG5.2|SLX1_PICST RecName: Full=Structure-specific endonuclease subunit SLX1
gi|149387944|gb|ABN68333.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 336
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 76/123 (61%), Gaps = 7/123 (5%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
F+GVYLL S P+ YIG T DP RR++QHN GGA++T G PW M+L+VY
Sbjct: 22 FYGVYLLQSE-PKP-SSFYIGSTPDPPRRLRQHNGDLKAGGAYRTKRAGFRPWRMLLVVY 79
Query: 61 GFPNDISALRFEWAWQHPKMSRRL---QHVARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
FP+ +SAL+FE ++QH +R + + +++ K T + + + ++L+++ ++ LP
Sbjct: 80 DFPSKVSALQFEHSFQHCHETRHIKQEERISKNKLSGRTLHHKVANVALLLRSSYFRHLP 139
Query: 118 LTV 120
L V
Sbjct: 140 LKV 142
>gi|259511451|sp|B3LMT5.1|SLX1_YEAS1 RecName: Full=Structure-specific endonuclease subunit SLX1
gi|259511452|sp|B5VEH8.1|SLX1_YEAS6 RecName: Full=Structure-specific endonuclease subunit SLX1
gi|190408623|gb|EDV11888.1| hypothetical protein SCRG_02743 [Saccharomyces cerevisiae RM11-1a]
gi|207347525|gb|EDZ73665.1| YBR228Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272880|gb|EEU07848.1| Slx1p [Saccharomyces cerevisiae JAY291]
gi|323334655|gb|EGA76029.1| Slx1p [Saccharomyces cerevisiae AWRI796]
gi|365766928|gb|EHN08417.1| Slx1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392301075|gb|EIW12164.1| Slx1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 304
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 72/123 (58%), Gaps = 7/123 (5%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
F+ YLL S N R Y+G T +P RR++QHN GGA++T G PW+M++IV
Sbjct: 13 FYCCYLLQSINKRQ--SFYVGSTPNPVRRLRQHNGKLAVGGAYRTKRDGSRPWEMIMIVR 70
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQH---VARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFP+ I+AL+FE AWQH + + V + K+ T + + L+ ++L+ +QR+
Sbjct: 71 GFPSKIAALQFEHAWQHGYQTHYIAEKDRVVKHKAGGRTLHHKVALMKLLLKHEFFQRMN 130
Query: 118 LTV 120
L V
Sbjct: 131 LIV 133
>gi|350640180|gb|EHA28533.1| hypothetical protein ASPNIDRAFT_189208 [Aspergillus niger ATCC
1015]
Length = 424
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 44/90 (48%), Positives = 58/90 (64%), Gaps = 7/90 (7%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTS--NRGPWDMVLIVY 60
++ YLL S R YIG T P RR+ QHN G+ GGA KT+ ++ PW+MVL+V
Sbjct: 15 YYCCYLLRSTKQR--TSLYIGSTPHPARRLAQHN-GESKGGARKTAKDDKRPWEMVLLVE 71
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQHVARK 90
GF + + AL+FEWAWQ+PKMS QH A +
Sbjct: 72 GFTSRVGALQFEWAWQNPKMSS--QHPANR 99
>gi|254582587|ref|XP_002499025.1| ZYRO0E01804p [Zygosaccharomyces rouxii]
gi|238942599|emb|CAR30770.1| ZYRO0E01804p [Zygosaccharomyces rouxii]
Length = 299
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 75/134 (55%), Gaps = 7/134 (5%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIV 59
VF+ YLL S R YIG T +P RR++QHN GGA++T G PW+++++V
Sbjct: 11 VFYCCYLLQSICKRQ--SFYIGSTPNPVRRLRQHNGILTRGGAYRTRREGTRPWEVIMVV 68
Query: 60 YGFPNDISALRFEWAWQHPKMSRRL---QHVARKKSKETTYTYCLRLLHIMLQTAPWQRL 116
YGFP+ I+AL+FE AWQH + + + + R K+ T + L ++ + +QR+
Sbjct: 69 YGFPSKITALQFEHAWQHGYKTHYIADDERIVRNKNGGRTIHHKLGTARLLAKNIYFQRM 128
Query: 117 PLTVQWLKPEYQQV 130
L V + + + +
Sbjct: 129 DLVVHFFNADVESI 142
>gi|391870669|gb|EIT79846.1| GIY-YIG type nuclease [Aspergillus oryzae 3.042]
Length = 403
Score = 79.3 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 57/142 (40%), Positives = 75/142 (52%), Gaps = 17/142 (11%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSN-RGPWDMVLIVYG 61
F+ YLL R+ YIG T P RR+ QHN G GGA KT+N + PW+MVLIV G
Sbjct: 15 FYCCYLL--RSTVRQTSLYIGSTPHPSRRLAQHN-GVSRGGARKTANDKRPWEMVLIVEG 71
Query: 62 FPNDISALRFE--WAWQHPKMSRRL-----QHVARKKSK------ETTYTYCLRLLHIML 108
F N +AL+FE WAWQ P SR L AR+K K + L LH +L
Sbjct: 72 FMNRTAALQFEYVWAWQKPGKSRHLGDDDNTESAREKGKTRPRGPARSLKGHLENLHALL 131
Query: 109 QTAPWQRLPLTVQWLKPEYQQV 130
++ + LPL V++ + Q+
Sbjct: 132 RSTYFSGLPLRVRFFADDVHQL 153
>gi|115433108|ref|XP_001216691.1| predicted protein [Aspergillus terreus NIH2624]
gi|121735324|sp|Q0CE14.1|SLX1_ASPTN RecName: Full=Structure-specific endonuclease subunit slx1
gi|114189543|gb|EAU31243.1| predicted protein [Aspergillus terreus NIH2624]
Length = 390
Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 76/135 (56%), Gaps = 9/135 (6%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG-PWDMVLIVY 60
++ YLL S + G Y+G T +P RR+ QHN G GGA KT+ + PW+MVL+V
Sbjct: 14 AYYCCYLLRSTVNKRAG-LYVGSTPNPPRRLPQHN-GLSKGGAKKTATKNRPWEMVLLVE 71
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQ-----HVARKKSKETTYTYCLRLLHIMLQTAPWQR 115
GF + +AL+FEWAWQH + SR + + R++ + T L LH +LQ+ + R
Sbjct: 72 GFMSRTAALQFEWAWQH-EDSRHMSKGEPGNTKRRQRPRRSLTANLEKLHSLLQSPCFSR 130
Query: 116 LPLTVQWLKPEYQQV 130
PL ++ + Q+
Sbjct: 131 WPLNIRIFASDVYQL 145
>gi|358371634|dbj|GAA88241.1| GIY-YIG catalytic domain containing protein [Aspergillus kawachii
IFO 4308]
Length = 424
Score = 79.0 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 44/90 (48%), Positives = 58/90 (64%), Gaps = 7/90 (7%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTS--NRGPWDMVLIVY 60
++ YLL S R YIG T P RR+ QHN G GGA KT+ ++ PW+MVL+V
Sbjct: 15 YYCCYLLRSTKQR--TSLYIGSTPHPARRLAQHN-GDSKGGARKTAKDDKRPWEMVLLVE 71
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQHVARK 90
GF + ++AL+FEWAWQ+PKMS QH A +
Sbjct: 72 GFTSRVAALQFEWAWQNPKMSS--QHPANR 99
>gi|259511393|sp|A2QUJ2.1|SLX1_ASPNC RecName: Full=Structure-specific endonuclease subunit slx1
gi|134078447|emb|CAK40390.1| unnamed protein product [Aspergillus niger]
Length = 424
Score = 78.6 bits (192), Expect = 8e-13, Method: Composition-based stats.
Identities = 43/90 (47%), Positives = 58/90 (64%), Gaps = 7/90 (7%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTS--NRGPWDMVLIVY 60
++ YLL S R YIG T P RR+ QHN G+ GGA KT+ ++ PW+MVL+V
Sbjct: 15 YYCCYLLRSTKQR--TSLYIGSTPHPARRLAQHN-GESKGGARKTAKDDKRPWEMVLLVE 71
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQHVARK 90
GF + + AL+FEWAWQ+P+MS QH A +
Sbjct: 72 GFTSRVGALQFEWAWQNPRMSS--QHPANR 99
>gi|296422032|ref|XP_002840567.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636785|emb|CAZ84758.1| unnamed protein product [Tuber melanosporum]
Length = 431
Score = 78.6 bits (192), Expect = 8e-13, Method: Composition-based stats.
Identities = 43/91 (47%), Positives = 58/91 (63%), Gaps = 7/91 (7%)
Query: 2 VFHGVYLLYSR-NPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTS--NRGPWDMVLI 58
VF+ VYLL S P+ YIG T DP RR+ QHN G+ GGA +TS N PW+M I
Sbjct: 48 VFYCVYLLRSTVRPKSF---YIGSTPDPRRRLAQHN-GQTKGGAERTSRENLRPWEMTCI 103
Query: 59 VYGFPNDISALRFEWAWQHPKMSRRLQHVAR 89
V GF + ++AL+FEWAWQ+P + +++ R
Sbjct: 104 VSGFTSSVAALQFEWAWQNPHKTSKIEKSQR 134
>gi|259511464|sp|C1H0K4.2|SLX1_PARBA RecName: Full=Structure-specific endonuclease subunit SLX1
Length = 392
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 75/150 (50%), Gaps = 24/150 (16%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKT--SNRGPWDMVLIV 59
F YLL R+ YIG T DP RR+ QHN G +G A +T N PW+MV IV
Sbjct: 23 AFSCCYLL--RSCVRHASLYIGSTPDPARRLAQHN-GDRYGAAKRTLRENLRPWEMVAIV 79
Query: 60 YGFPNDISALRFEWAWQHPKMSRR-------------------LQHVARKKSKETTYTYC 100
GF + ++AL+FEWAWQ+ K+SR + V R T+ T
Sbjct: 80 SGFTSRVAALQFEWAWQNTKVSRHADLDGNATQELGVRICPRTAKEVKRVAKPRTSLTNI 139
Query: 101 LRLLHIMLQTAPWQRLPLTVQWLKPEYQQV 130
L LH++L++ + + P+ V++ + +V
Sbjct: 140 LANLHLLLRSPYFSKWPIEVRFFSADVHRV 169
>gi|290878245|emb|CBK39304.1| Slx1p [Saccharomyces cerevisiae EC1118]
Length = 304
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 72/123 (58%), Gaps = 7/123 (5%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
F+ YLL S + R Y+G T +P RR++QHN GGA++T G PW+M++IV
Sbjct: 13 FYCCYLLQSISKRQ--SFYVGSTPNPVRRLRQHNGKLAVGGAYRTKRDGSRPWEMIMIVR 70
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQH---VARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFP+ I+AL+FE AWQH + + V + K+ T + + L+ ++L+ +QR+
Sbjct: 71 GFPSKIAALQFEHAWQHGYQTHYIAEKDRVVKHKAGGRTLHHKVALMKLLLKHEFFQRMN 130
Query: 118 LTV 120
L V
Sbjct: 131 LIV 133
>gi|343428549|emb|CBQ72079.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 652
Score = 77.8 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/83 (49%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+ Y L R+ G TYIG T P RR +QHN G GA+KT+ PW+M IVYGF
Sbjct: 13 FYACYFL--RSLSSPGITYIGSTPAPPRRKRQHN-GDLTQGAYKTARARPWEMECIVYGF 69
Query: 63 PNDISALRFEWAWQHPKMSRRLQ 85
+ I+AL+FEWAW P +SR L+
Sbjct: 70 SSKIAALQFEWAWAKPHLSRHLK 92
>gi|50556574|ref|XP_505695.1| YALI0F21131p [Yarrowia lipolytica]
gi|74632389|sp|Q6C0W7.1|SLX1_YARLI RecName: Full=Structure-specific endonuclease subunit SLX1
gi|49651565|emb|CAG78504.1| YALI0F21131p [Yarrowia lipolytica CLIB122]
Length = 288
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 74/127 (58%), Gaps = 7/127 (5%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKT--SNRGPWDMVLIVY 60
F+GVYLL S Y+G T +P RRI+QHN GGA +T ++ PW MVLIV
Sbjct: 8 FYGVYLLQSTKKPL--SCYVGSTPNPFRRIRQHNGDLKAGGAWRTKRAHLRPWSMVLIVN 65
Query: 61 GFPNDISALRFEWAWQHPKMSRRL--QHVARK-KSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFP+ ISAL+FE A QHP M+R + + + RK K L + ++++ + ++R+
Sbjct: 66 GFPSKISALKFEHALQHPNMTRLITTKDIKRKVPQKARALGTHLAFIRLLVRCSYFRRMH 125
Query: 118 LTVQWLK 124
L + + +
Sbjct: 126 LRITFFR 132
>gi|295666952|ref|XP_002794026.1| GIY-YIG catalytic domain-containing protein [Paracoccidioides sp.
'lutzii' Pb01]
gi|226277679|gb|EEH33245.1| GIY-YIG catalytic domain-containing protein [Paracoccidioides sp.
'lutzii' Pb01]
Length = 379
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 75/150 (50%), Gaps = 24/150 (16%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKT--SNRGPWDMVLIV 59
F YLL R+ YIG T DP RR+ QHN G +G A +T N PW+MV IV
Sbjct: 23 AFSCCYLL--RSCVRHASLYIGSTPDPARRLAQHN-GDRYGAAKRTLRENLRPWEMVAIV 79
Query: 60 YGFPNDISALRFEWAWQHPKMSRR-------------------LQHVARKKSKETTYTYC 100
GF + ++AL+FEWAWQ+ K+SR + V R T+ T
Sbjct: 80 SGFTSRVAALQFEWAWQNTKVSRHADLDGNATQELGVRICPRTAKEVKRVAKPRTSLTNI 139
Query: 101 LRLLHIMLQTAPWQRLPLTVQWLKPEYQQV 130
L LH++L++ + + P+ V++ + +V
Sbjct: 140 LANLHLLLRSPYFSKWPIEVRFFSADVHRV 169
>gi|327301611|ref|XP_003235498.1| hypothetical protein TERG_04552 [Trichophyton rubrum CBS 118892]
gi|326462850|gb|EGD88303.1| hypothetical protein TERG_04552 [Trichophyton rubrum CBS 118892]
Length = 389
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 78/147 (53%), Gaps = 22/147 (14%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
F+ VYLL R+ YIG T +P RR+ QHN G+ GGAH+T PW+MV+IV
Sbjct: 24 FYCVYLL--RSTVRHASLYIGSTPNPARRLAQHN-GRIKGGAHRTHREKLRPWEMVMIVS 80
Query: 61 GFPNDISALRFEWAWQHPKMSRRL----------------QHVARKKSK-ETTYTYCLRL 103
GF + +AL+FEWAWQ+ + SR + +A+K S T T +
Sbjct: 81 GFTSRTAALQFEWAWQNTQASRHAAGDEVETNVRICSKTGRRLAKKSSNPRETMTSTMAR 140
Query: 104 LHIMLQTAPWQRLPLTVQWLKPEYQQV 130
LH++L++ + PL V++ + +V
Sbjct: 141 LHVLLRSPYFSSWPLQVRFFNADIHRV 167
>gi|326469001|gb|EGD93010.1| GIY-YIG catalytic domain containing protein [Trichophyton tonsurans
CBS 112818]
Length = 208
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 77/147 (52%), Gaps = 22/147 (14%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
F+ VYLL R+ YIG T +P RR+ QHN G+ GGAH+T PW+MV+IV
Sbjct: 24 FYCVYLL--RSAVRHASLYIGSTPNPARRLAQHN-GRIKGGAHRTHREKLRPWEMVMIVS 80
Query: 61 GFPNDISALRFEWAWQHPKMSRRL----------------QHVARKKSK-ETTYTYCLRL 103
GF + +AL+FEWAWQ+ + SR + +A+K S T +
Sbjct: 81 GFTSRTAALQFEWAWQNTQASRHATGDEIETKVRICSKTGKRLAKKSSNPREPMTSIMAR 140
Query: 104 LHIMLQTAPWQRLPLTVQWLKPEYQQV 130
LH++L++ + PL VQ+ + +V
Sbjct: 141 LHVLLRSPYFSSWPLQVQFFNADIHRV 167
>gi|380016626|ref|XP_003692279.1| PREDICTED: structure-specific endonuclease subunit SLX1 homolog
isoform 3 [Apis florea]
Length = 199
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 51/74 (68%), Gaps = 5/74 (6%)
Query: 55 MVLIVYGFPNDISALRFEWAWQHPKMSRRLQHV----ARKKSKET-TYTYCLRLLHIMLQ 109
MVLI++GF N SAL FEWAWQHP SRRL+HV A+KK ++ + L +L ML+
Sbjct: 1 MVLIIHGFLNKTSALSFEWAWQHPHKSRRLKHVYVSNAKKKLQQKRKIRFHLSVLSEMLK 60
Query: 110 TAPWQRLPLTVQWL 123
PW RLPLT++WL
Sbjct: 61 IGPWCRLPLTIRWL 74
>gi|363750346|ref|XP_003645390.1| hypothetical protein Ecym_3061 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889024|gb|AET38573.1| Hypothetical protein Ecym_3061 [Eremothecium cymbalariae
DBVPG#7215]
Length = 298
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 75/133 (56%), Gaps = 7/133 (5%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
F+ YLL S P+ L YIG T +P RR++QHN GGA++T G PW++V+ VY
Sbjct: 13 FYCSYLLRSI-PKRLSY-YIGSTPNPVRRLRQHNGLLTKGGAYRTKREGTRPWELVVFVY 70
Query: 61 GFPNDISALRFEWAWQHPKMSRRL---QHVARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFP+ I+AL+FE AWQH +R + + V + K+ + + ++ ++L + +
Sbjct: 71 GFPSKIAALQFEHAWQHSYKTRFIAADKRVVKNKTSGRSIHQKIAVVKLLLSHPFFAVMN 130
Query: 118 LTVQWLKPEYQQV 130
LTVQ E +
Sbjct: 131 LTVQIFSEEIHNI 143
>gi|323338738|gb|EGA79954.1| Slx1p [Saccharomyces cerevisiae Vin13]
Length = 304
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 70/123 (56%), Gaps = 7/123 (5%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
F+ YLL S R Y+G T +P RR++QHN GGA++T G PW+M++IV
Sbjct: 13 FYCCYLLQSIXKRQ--SFYVGSTPNPVRRLRQHNGKLAVGGAYRTKRDGSRPWEMIMIVR 70
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQH---VARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFP I+AL+FE AWQH + + V + K+ T + + L+ ++L+ +QR+
Sbjct: 71 GFPXKIAALQFEHAWQHGYQTHYIAEKDRVVKHKAGGRTLHHKVALMKLLLKHEFFQRMN 130
Query: 118 LTV 120
L V
Sbjct: 131 LIV 133
>gi|406860390|gb|EKD13449.1| GIY-YIG catalytic domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 428
Score = 76.3 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 47/101 (46%), Positives = 62/101 (61%), Gaps = 12/101 (11%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
F+ YLL R+ Y+G T +P RR++QHN G GGA +TS + PW M IV
Sbjct: 10 FYCCYLL--RSTVRGSSVYVGSTPNPVRRLRQHN-GVAKGGAVRTSRQSLRPWAMTCIVT 66
Query: 61 GFPNDISALRFEWAWQHPKM------SRRLQHVA-RKKSKE 94
GFP+ I+AL+FEWAWQ+P + S R+QH A RKKS +
Sbjct: 67 GFPSHIAALQFEWAWQNPHITLHIPPSARIQHAAGRKKSGQ 107
>gi|302912033|ref|XP_003050623.1| hypothetical protein NECHADRAFT_49413 [Nectria haematococca mpVI
77-13-4]
gi|256731560|gb|EEU44910.1| hypothetical protein NECHADRAFT_49413 [Nectria haematococca mpVI
77-13-4]
Length = 311
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 76/144 (52%), Gaps = 18/144 (12%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIV 59
+GVY+L R+ YIG T +P RR+KQHN G+ GGA +T+ PW+++++V
Sbjct: 10 ALYGVYVL--RSTVRHASIYIGSTPNPPRRLKQHN-GEARGGAVRTAREKLRPWEVMILV 66
Query: 60 YGFPNDISALRFEWAWQHPKMS------RRLQHVARKKSKET-------TYTYCLRLLHI 106
GFP+ I+AL+FEWA +P ++ RL A K+ T T + LH+
Sbjct: 67 TGFPSSIAALKFEWAMTNPHLTTHISAEERLTKAAEKRKGMKKPRKPIHTLTSVVSNLHL 126
Query: 107 MLQTAPWQRLPLTVQWLKPEYQQV 130
+ + R PLTV + E ++
Sbjct: 127 LTNVPSFARWPLTVHFFASEPKKA 150
>gi|259511442|sp|C0S8C7.1|SLX1_PARBP RecName: Full=Structure-specific endonuclease subunit SLX1
gi|225683577|gb|EEH21861.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 423
Score = 76.3 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 49/149 (32%), Positives = 75/149 (50%), Gaps = 24/149 (16%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKT--SNRGPWDMVLIVY 60
F+ YLL R+ YIG T DP RR+ QHN ++ G A +T N PW+MV IV
Sbjct: 24 FYCCYLL--RSCVRHASLYIGSTPDPARRLAQHNGDRN-GAAKRTLRENLRPWEMVAIVS 80
Query: 61 GFPNDISALRFEWAWQHPKMSRRL-------------------QHVARKKSKETTYTYCL 101
GF + ++AL+FEWAWQ+ K+SR + V T+ T L
Sbjct: 81 GFTSRVAALQFEWAWQNTKVSRHADLDGNAIQELGVRICPRTGKGVKGTAKPRTSLTNIL 140
Query: 102 RLLHIMLQTAPWQRLPLTVQWLKPEYQQV 130
LH++L++ + + P+ V++ + +V
Sbjct: 141 ANLHLLLRSPYFSKWPVEVRFFSADVHRV 169
>gi|242792108|ref|XP_002481886.1| GIY-YIG catalytic domain containing protein [Talaromyces stipitatus
ATCC 10500]
gi|259511449|sp|B8MDD1.1|SLX1_TALSN RecName: Full=Structure-specific endonuclease subunit slx1
gi|218718474|gb|EED17894.1| GIY-YIG catalytic domain containing protein [Talaromyces stipitatus
ATCC 10500]
Length = 389
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 74/142 (52%), Gaps = 21/142 (14%)
Query: 2 VFHGVYLLYS-RNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLI 58
F+ YLL S + P L YIG T DP RR++QHN G GGA +T PW+MV I
Sbjct: 17 AFYCCYLLRSAKRPSAL---YIGSTPDPARRLEQHN-GFAKGGAKRTERNTLRPWEMVAI 72
Query: 59 VYGFPNDISALRFEWAWQHPKMSRRLQHVA-----RKKSKE---------TTYTYCLRLL 104
V GFP+ AL+FEW+WQH +R + V RK+ T+ L L
Sbjct: 73 VEGFPSRTGALQFEWSWQHVHTTRHIGAVETDQLNRKRKNPPTDKGSGIWTSTPKVLGNL 132
Query: 105 HIMLQTAPWQRLPLTVQWLKPE 126
H +L++ + PLTV++L E
Sbjct: 133 HQLLRSTYFGTWPLTVRFLSSE 154
>gi|156836521|ref|XP_001642318.1| hypothetical protein Kpol_223p3 [Vanderwaltozyma polyspora DSM
70294]
gi|259511450|sp|A7TTE6.1|SLX1_VANPO RecName: Full=Structure-specific endonuclease subunit SLX1
gi|156112818|gb|EDO14460.1| hypothetical protein Kpol_223p3 [Vanderwaltozyma polyspora DSM
70294]
Length = 319
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 51/78 (65%), Gaps = 4/78 (5%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIV 59
F+ YLL S N + YIG T +P RR++QHN GGA++T G PW+MVL+V
Sbjct: 20 TFYCCYLLQSINKKQ--SFYIGSTPNPVRRLRQHNGNLSNGGAYRTKREGTRPWEMVLVV 77
Query: 60 YGFPNDISALRFEWAWQH 77
YGF + I+AL+FE AWQH
Sbjct: 78 YGFTSKIAALQFEHAWQH 95
>gi|326480673|gb|EGE04683.1| GIY-YIG catalytic domain-containing protein [Trichophyton equinum
CBS 127.97]
Length = 389
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 76/147 (51%), Gaps = 22/147 (14%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
F+ VYLL R+ YIG T +P RR+ QHN G GGAH+T PW+MV+IV
Sbjct: 24 FYCVYLL--RSAVRHASLYIGSTPNPARRLAQHN-GHIKGGAHRTHREKLRPWEMVMIVS 80
Query: 61 GFPNDISALRFEWAWQHPKMSRRL----------------QHVARKKSK-ETTYTYCLRL 103
GF + +AL+FEWAWQ+ + SR + +A+K S T +
Sbjct: 81 GFTSRTAALQFEWAWQNTQASRHATGDEIETKVRICSKTGKRLAKKSSNPREPMTSIMAR 140
Query: 104 LHIMLQTAPWQRLPLTVQWLKPEYQQV 130
LH++L++ + PL VQ+ + +V
Sbjct: 141 LHVLLRSPYFSSWPLQVQFFNADIHRV 167
>gi|121800891|sp|Q2UA42.1|SLX1_ASPOR RecName: Full=Structure-specific endonuclease subunit slx1
gi|83771441|dbj|BAE61573.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 406
Score = 75.1 bits (183), Expect = 9e-12, Method: Composition-based stats.
Identities = 55/145 (37%), Positives = 75/145 (51%), Gaps = 20/145 (13%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSN-RGPWDMVLIVYG 61
F+ YLL R+ YIG T P RR+ QHN G GGA KT+N + PW+MVLIV G
Sbjct: 15 FYCCYLL--RSTVRQTSLYIGSTPHPSRRLAQHN-GVSRGGARKTANDKRPWEMVLIVEG 71
Query: 62 FPNDISALRFE-----WAWQHPKMSRRL-----QHVARKKSK------ETTYTYCLRLLH 105
F + +AL+F+ WAWQ P SR L AR+K K + L LH
Sbjct: 72 FMSRTAALQFDTIYTTWAWQKPGKSRHLGDDDNTESAREKGKTRPRGPARSLKGHLENLH 131
Query: 106 IMLQTAPWQRLPLTVQWLKPEYQQV 130
+L++ + LPL V++ + Q+
Sbjct: 132 ALLRSTYFSGLPLRVRFFADDVHQL 156
>gi|45184997|ref|NP_982715.1| AAR172Wp [Ashbya gossypii ATCC 10895]
gi|74695655|sp|Q75EA5.1|SLX1_ASHGO RecName: Full=Structure-specific endonuclease subunit SLX1
gi|44980618|gb|AAS50539.1| AAR172Wp [Ashbya gossypii ATCC 10895]
gi|374105915|gb|AEY94826.1| FAAR172Wp [Ashbya gossypii FDAG1]
Length = 301
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 75/134 (55%), Gaps = 7/134 (5%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIV 59
F+ YLL S P+ L YIG T +P RR++QHN GGA++T +G PW++ V
Sbjct: 12 AFYCCYLLRS-IPKRLS-YYIGSTPNPVRRLRQHNGLLTKGGAYRTKRQGTRPWELAASV 69
Query: 60 YGFPNDISALRFEWAWQHPKMSRRLQH---VARKKSKETTYTYCLRLLHIMLQTAPWQRL 116
GFP+ I+AL+FE AWQHP +R ++ + +KK + L +L ++L ++ +
Sbjct: 70 SGFPSKIAALQFEHAWQHPYQTRFIKSEDRIVKKKGGGRSIHQRLAVLKLLLHHPFFKVM 129
Query: 117 PLTVQWLKPEYQQV 130
L V + Q+V
Sbjct: 130 SLVVHLFSEDIQRV 143
>gi|315049349|ref|XP_003174049.1| hypothetical protein MGYG_04223 [Arthroderma gypseum CBS 118893]
gi|311342016|gb|EFR01219.1| hypothetical protein MGYG_04223 [Arthroderma gypseum CBS 118893]
Length = 392
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 77/150 (51%), Gaps = 28/150 (18%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
F+ YLL R+ YIG T +P RR+ QHN G+ GGAH+T PW+MV+IV
Sbjct: 24 FYCAYLL--RSTVRHASLYIGSTPNPARRLAQHN-GRIKGGAHRTHREKLRPWEMVMIVS 80
Query: 61 GFPNDISALRFEWAWQH-------------------PKMSRRLQHVARKKSK-ETTYTYC 100
GF + +AL+FEWAWQ+ PK RRL A+K S + T
Sbjct: 81 GFTSRTAALQFEWAWQNTQASRHATTDKIEINVRICPKTGRRL---AKKSSNPRESMTSI 137
Query: 101 LRLLHIMLQTAPWQRLPLTVQWLKPEYQQV 130
+ LH++L++ + PL V++ K + +
Sbjct: 138 MARLHVLLRSPYFSSWPLQVRFFKEDVHRT 167
>gi|146421112|ref|XP_001486507.1| hypothetical protein PGUG_02178 [Meyerozyma guilliermondii ATCC
6260]
Length = 295
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 56/85 (65%), Gaps = 7/85 (8%)
Query: 3 FHGVYLLYSR-NPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKT--SNRGPWDMVLIV 59
F+GVY+L S +PR YIG T DP RR++QHN G GA +T ++R PW M+ I
Sbjct: 12 FYGVYILQSEPSPRSF---YIGSTPDPIRRLRQHN-GDLKQGAFRTRRTSRRPWKMIAIT 67
Query: 60 YGFPNDISALRFEWAWQHPKMSRRL 84
+ FP+ ++AL+FE A QHPK SR +
Sbjct: 68 HNFPSRVAALQFEHALQHPKTSRHM 92
>gi|259511462|sp|A5DFX7.2|SLX1_PICGU RecName: Full=Structure-specific endonuclease subunit SLX1
gi|190346077|gb|EDK38080.2| hypothetical protein PGUG_02178 [Meyerozyma guilliermondii ATCC
6260]
Length = 295
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 56/85 (65%), Gaps = 7/85 (8%)
Query: 3 FHGVYLLYSR-NPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKT--SNRGPWDMVLIV 59
F+GVY+L S +PR YIG T DP RR++QHN G GA +T ++R PW M+ I
Sbjct: 12 FYGVYILQSEPSPRSF---YIGSTPDPIRRLRQHN-GDLKQGAFRTRRTSRRPWKMIAIT 67
Query: 60 YGFPNDISALRFEWAWQHPKMSRRL 84
+ FP+ ++AL+FE A QHPK SR +
Sbjct: 68 HNFPSRVAALQFEHALQHPKTSRHM 92
>gi|449297757|gb|EMC93774.1| hypothetical protein BAUCODRAFT_47071, partial [Baudoinia
compniacensis UAMH 10762]
Length = 309
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 66/124 (53%), Gaps = 23/124 (18%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVYGFPNDISALRFEWAWQHP 78
Y+G T +P RR+KQHN G GGA +TS PW+M +V GFP+ I+AL+FEWAWQ+P
Sbjct: 20 YVGSTPNPVRRLKQHN-GIAPGGAVRTSRDTLRPWEMTCLVSGFPSKIAALQFEWAWQNP 78
Query: 79 KMSRRLQHVARKKSKET--------------------TYTYCLRLLHIMLQTAPWQRLPL 118
+++R + R T + T L LH++L+ ++R PL
Sbjct: 79 QLTRHITADTRLAQARTNTRISPKTGKVRKRPGRPRLSLTDRLANLHLLLRAPSFERWPL 138
Query: 119 TVQW 122
V +
Sbjct: 139 KVTF 142
>gi|389629414|ref|XP_003712360.1| hypothetical protein MGG_04879 [Magnaporthe oryzae 70-15]
gi|351644692|gb|EHA52553.1| hypothetical protein MGG_04879 [Magnaporthe oryzae 70-15]
gi|440465449|gb|ELQ34769.1| GIY-YIG catalytic domain containing protein [Magnaporthe oryzae
Y34]
gi|440487668|gb|ELQ67443.1| GIY-YIG catalytic domain containing protein [Magnaporthe oryzae
P131]
Length = 365
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 66/120 (55%), Gaps = 15/120 (12%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVYGFPNDISALRFEWAWQHP 78
YIG T +P RR+KQHN G+ GGA +T PW+MV +V GFP+ + AL+FEWA +P
Sbjct: 27 YIGSTPNPPRRLKQHN-GEAKGGAARTCRPSLRPWEMVGLVSGFPSLVGALKFEWALTNP 85
Query: 79 KMSRRLQHVAR------------KKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQWLKPE 126
+S + +R K ++ L+ +H++L+ A + R PL + + PE
Sbjct: 86 HISLHIPFESRISVTSGRKRNGMPKRPRSSLNSILQNVHLLLRVASFSRWPLKLHFFAPE 145
>gi|302408587|ref|XP_003002128.1| GIY-YIG catalytic domain containing protein [Verticillium
albo-atrum VaMs.102]
gi|261359049|gb|EEY21477.1| GIY-YIG catalytic domain containing protein [Verticillium
albo-atrum VaMs.102]
Length = 454
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/117 (37%), Positives = 64/117 (54%), Gaps = 15/117 (12%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVYGFPNDISALRFEWAWQHP 78
YIG T +P RR+KQHN G GGA +TS PW+M+ IV GFP+ I+AL+FEWA +P
Sbjct: 214 YIGSTPNPPRRLKQHN-GLARGGAARTSRSSLRPWEMIAIVSGFPSMIAALKFEWALTNP 272
Query: 79 KMSRRLQHVAR------------KKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQWL 123
+S + +R K T + LH++L+ ++R PLT+ +
Sbjct: 273 HLSLHIPSESRISRAAGVKKNGHPKRPRPGITSIMSNLHLLLRVPSFERWPLTLHFF 329
>gi|355756697|gb|EHH60305.1| Structure-specific endonuclease subunit SLX1 [Macaca
fascicularis]
Length = 178
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 39/50 (78%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGP 52
F GVYLLY NPRY GR Y+G+TV+P RR++QHN G+ GGA +TS RGP
Sbjct: 13 FFGVYLLYCLNPRYRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGRGP 62
>gi|164661415|ref|XP_001731830.1| hypothetical protein MGL_1098 [Malassezia globosa CBS 7966]
gi|259511403|sp|A8PWH1.1|SLX1_MALGO RecName: Full=Structure-specific endonuclease subunit SLX1
gi|159105731|gb|EDP44616.1| hypothetical protein MGL_1098 [Malassezia globosa CBS 7966]
Length = 443
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 6 VYLLYS-RNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPN 64
VY+ Y R+ +TYIG T DP RR++QHN G GA T PW M ++VYGFP+
Sbjct: 14 VYVCYCLRSLSRPNQTYIGSTPDPIRRLRQHN-GLVKQGAFYTRMARPWTMDVVVYGFPS 72
Query: 65 DISALRFEWAWQHPKMSRRLQ 85
++AL+FEW+WQ P SR L+
Sbjct: 73 KLAALQFEWSWQKPHASRHLR 93
>gi|268560286|ref|XP_002646175.1| Hypothetical protein CBG23741 [Caenorhabditis briggsae]
Length = 377
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 54 DMVLIVYGFPNDISALRFEWAWQHPKMSRRLQHVARKKS-KETTYTYCLRLLHIMLQTAP 112
DMV +V+GFPN ++ALRFEWAWQ+P +S+ L+ KK KET + Y LR+ ++ +
Sbjct: 158 DMVCVVHGFPNHVAALRFEWAWQNPAVSKSLKEKQLKKERKETPFAYQLRIACELMNSEA 217
Query: 113 WQRLPLTVQWL 123
+ R LT +WL
Sbjct: 218 FSRFALTFRWL 228
>gi|320589966|gb|EFX02422.1| giy-yig catalytic domain containing protein [Grosmannia clavigera
kw1407]
Length = 400
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 52/138 (37%), Positives = 74/138 (53%), Gaps = 17/138 (12%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSN--RGPWDMVLIVY 60
+ VY+L R+ YIG T DP RR+KQHN G+ GGA +TS PW+MV +V
Sbjct: 11 LYTVYIL--RSTMRHASLYIGSTPDPPRRLKQHN-GEIRGGAARTSRVRLRPWEMVGLVS 67
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQHVAR----KKSKET--------TYTYCLRLLHIML 108
GFP I+AL+FEWA +P S + +R KK+K++ + L LH++L
Sbjct: 68 GFPGLIAALKFEWALTNPHRSLHIPSESRLTVSKKTKKSGHLRKPSKSMQSILANLHLLL 127
Query: 109 QTAPWQRLPLTVQWLKPE 126
+ + R PL + PE
Sbjct: 128 RVPSFARWPLRLHLFVPE 145
>gi|367016849|ref|XP_003682923.1| hypothetical protein TDEL_0G03450 [Torulaspora delbrueckii]
gi|359750586|emb|CCE93712.1| hypothetical protein TDEL_0G03450 [Torulaspora delbrueckii]
Length = 310
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 74/133 (55%), Gaps = 7/133 (5%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKT--SNRGPWDMVLIVY 60
F+ YLL S R YIG T +P RR++QHN GGA++T N PW+M+L+V+
Sbjct: 20 FYCCYLLQSICKRQ--SFYIGSTPNPVRRLRQHNGILARGGAYRTKRGNTRPWEMILLVH 77
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQH---VARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFP ++AL+FE AWQH + + + + ++ + + L ++ ++L +Q +
Sbjct: 78 GFPCKVAALQFEHAWQHGYKTHYIAEDVRIVKNRNGGRSLHHKLGVMKLLLTHVYFQHMS 137
Query: 118 LTVQWLKPEYQQV 130
L ++ E Q++
Sbjct: 138 LRIEIFNLETQRI 150
>gi|340519368|gb|EGR49607.1| predicted protein [Trichoderma reesei QM6a]
Length = 305
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 76/143 (53%), Gaps = 17/143 (11%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIV 59
+ VY+L R+ Y+G T +P RR++QHN G+ GGA +TS PW+M ++V
Sbjct: 10 ALYAVYVL--RSTVRHASIYVGSTPNPPRRLRQHN-GEAKGGAVRTSRDSLRPWEMAIVV 66
Query: 60 YGFPNDISALRFEWAWQHPKMS-------RRLQHVARKKS---KETTYTY--CLRLLHIM 107
GFP+ I+AL+FEWA +P ++ R RKKS K + +T + LH++
Sbjct: 67 SGFPSSIAALKFEWALNNPHLTTHIPKDERITVATQRKKSGMPKRSPHTLKSIVSNLHLL 126
Query: 108 LQTAPWQRLPLTVQWLKPEYQQV 130
+ + R PL + + P+ +
Sbjct: 127 TRVPSFSRWPLNLHFFTPDAHKA 149
>gi|346975522|gb|EGY18974.1| GIY-YIG catalytic domain containing protein [Verticillium dahliae
VdLs.17]
Length = 324
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 63/117 (53%), Gaps = 15/117 (12%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVYGFPNDISALRFEWAWQHP 78
YIG T +P RR+KQHN G GGA +TS PW+M+ IV GFP+ I+AL+FEWA +P
Sbjct: 27 YIGSTPNPPRRLKQHN-GLARGGAARTSRSSLRPWEMIAIVSGFPSMIAALKFEWALTNP 85
Query: 79 KMSRRLQHVAR------------KKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQWL 123
+S + +R K T + LH++L+ ++R PL + +
Sbjct: 86 HLSLHIPSESRISRAAGVKKNGHPKRPRPGITSIMSNLHLLLRVPSFERWPLKLHFF 142
>gi|339256310|ref|XP_003370470.1| GIY-YIG domain-containing protein 1 [Trichinella spiralis]
gi|316959523|gb|EFV47680.1| GIY-YIG domain-containing protein 1 [Trichinella spiralis]
Length = 76
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 42/53 (79%), Gaps = 2/53 (3%)
Query: 3 FHGVYLLYSRN--PRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPW 53
F+G YLL S + P Y G+ Y+G+TV+P+RRIKQHN+G +GGA +TSNRGPW
Sbjct: 24 FYGCYLLVSESEKPLYRGKCYVGFTVNPERRIKQHNRGSRYGGAWRTSNRGPW 76
>gi|354505667|ref|XP_003514889.1| PREDICTED: structure-specific endonuclease subunit SLX1-like,
partial [Cricetulus griseus]
Length = 192
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%)
Query: 71 FEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQWLKPEYQQV 130
FEWAWQHP+ SRRL HV + E ++ + LR+L ML+ PW RLPLT++WL+P++
Sbjct: 1 FEWAWQHPQASRRLTHVGPRLRSEASFAFHLRVLAHMLRAPPWVRLPLTLRWLRPDFHHE 60
Query: 131 LT 132
L+
Sbjct: 61 LS 62
>gi|430811517|emb|CCJ31003.1| unnamed protein product [Pneumocystis jirovecii]
Length = 342
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 77/159 (48%), Gaps = 43/159 (27%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWD------- 54
+F+ YLL S R TY+G T +P +R++QHN G+ GAHKT++ PW+
Sbjct: 6 LFYCCYLLKSELTR---NTYVGSTNNPLKRLRQHN-GEIASGAHKTASGRPWNVCRIVFR 61
Query: 55 --------------MVLIVYGFPNDISALRFEWAWQHPK-----------------MSRR 83
+V VYGFP+ +SAL+FEWAWQ+P ++
Sbjct: 62 YFVEFFVDFFLKKQIVCFVYGFPSIVSALQFEWAWQNPNIIFKAQKNEKNQHDNQIINNT 121
Query: 84 LQHV-ARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQ 121
QHV R++ T+ + +L+ ML W+ PL ++
Sbjct: 122 TQHVFPRRQGVRTSLKTRVYVLYSMLIMNIWKNWPLKIK 160
>gi|50310997|ref|XP_455521.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74605245|sp|Q6CKL8.1|SLX1_KLULA RecName: Full=Structure-specific endonuclease subunit SLX1
gi|49644657|emb|CAG98229.1| KLLA0F09713p [Kluyveromyces lactis]
Length = 288
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVYGFPNDISALRFEWAWQHP 78
YIG + DP RR++QHN GGA++T G PW MV +YGF + I+AL+FE AWQH
Sbjct: 27 YIGSSPDPVRRLRQHNGAVRRGGAYRTKRNGTRPWKMVCFIYGFTSKIAALQFEHAWQHS 86
Query: 79 KMSRRLQHVARKKSKETT 96
+R +++ R +K+ T
Sbjct: 87 YKTRFIENNERLVTKKNT 104
>gi|440635916|gb|ELR05835.1| hypothetical protein GMDG_07608 [Geomyces destructans 20631-21]
Length = 329
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 51/79 (64%), Gaps = 7/79 (8%)
Query: 6 VYLLYSRN-PRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVYGF 62
VYLL S P L YIG T P RR++QHN G GGA +T+ PW+M ++V GF
Sbjct: 12 VYLLRSLPLPSSL---YIGSTPLPSRRLRQHN-GVVVGGASRTARASHRPWEMPVLVVGF 67
Query: 63 PNDISALRFEWAWQHPKMS 81
P+ + AL+FEWAWQHP +S
Sbjct: 68 PSHVGALQFEWAWQHPTLS 86
>gi|148685467|gb|EDL17414.1| GIY-YIG domain containing 2, isoform CRA_d [Mus musculus]
Length = 293
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 43/62 (69%)
Query: 71 FEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQWLKPEYQQV 130
FEWAWQHP+ SRRL HV + E + + LR+L ML+ PW RLPLT++WL+P+++
Sbjct: 101 FEWAWQHPQASRRLTHVGPRLRSEAAFAFHLRVLAHMLRVPPWVRLPLTLRWLRPDFRHE 160
Query: 131 LT 132
L
Sbjct: 161 LC 162
>gi|254564951|ref|XP_002489586.1| Subunit of a complex, with Slx4p, that hydrolyzes 5' branches from
duplex DNA [Komagataella pastoris GS115]
gi|238029382|emb|CAY67305.1| Subunit of a complex, with Slx4p, that hydrolyzes 5' branches from
duplex DNA [Komagataella pastoris GS115]
Length = 249
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 65/118 (55%), Gaps = 9/118 (7%)
Query: 6 VYLLYSRN-PRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVYGF 62
VYLL S+ P+ YIG T +P RR+ QHN GGA +T G PW MVL+ GF
Sbjct: 4 VYLLQSQEKPQSF---YIGSTNNPQRRLAQHNGDLAAGGAFRTKREGYRPWKMVLLCLGF 60
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTV 120
+ I+AL+FE AWQH ++R H+ K S + L L +L + ++R ++V
Sbjct: 61 HSKIAALQFEHAWQHSHLTR---HIEDKLSHSNSIHIKLANLKKLLGSEGFRRWNISV 115
>gi|149462378|ref|XP_001517791.1| PREDICTED: structure-specific endonuclease subunit SLX1-like
[Ornithorhynchus anatinus]
Length = 108
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 39/51 (76%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPW 53
F GVYLLY NP++ GR Y+G+TV+P RR +QHN G+ GGA +TS RGPW
Sbjct: 58 FFGVYLLYCLNPKHRGRVYVGFTVNPRRRAQQHNAGRKKGGAWRTSGRGPW 108
>gi|121718366|ref|XP_001276188.1| GIY-YIG catalytic domain protein [Aspergillus clavatus NRRL 1]
gi|259511391|sp|A1C4Z4.1|SLX1_ASPCL RecName: Full=Structure-specific endonuclease subunit slx1
gi|119404386|gb|EAW14762.1| GIY-YIG catalytic domain protein [Aspergillus clavatus NRRL 1]
Length = 434
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/85 (47%), Positives = 53/85 (62%), Gaps = 5/85 (5%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
F+ YLL R+ YIG T +P RR+ QHN G GGA +T+ PW+MV+IV
Sbjct: 15 FYCCYLL--RSTVRHASLYIGSTPNPARRLTQHN-GVVKGGARRTAAEKLRPWEMVMIVE 71
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQ 85
GF + + AL+FEWAWQ+P SR L+
Sbjct: 72 GFMSRLGALQFEWAWQNPGYSRHLR 96
>gi|328350010|emb|CCA36410.1| hypothetical protein PP7435_Chr1-0249 [Komagataella pastoris CBS
7435]
Length = 209
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 65/118 (55%), Gaps = 9/118 (7%)
Query: 6 VYLLYSRN-PRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVYGF 62
VYLL S+ P+ YIG T +P RR+ QHN GGA +T G PW MVL+ GF
Sbjct: 4 VYLLQSQEKPQSF---YIGSTNNPQRRLAQHNGDLAAGGAFRTKREGYRPWKMVLLCLGF 60
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTV 120
+ I+AL+FE AWQH ++R H+ K S + L L +L + ++R ++V
Sbjct: 61 HSKIAALQFEHAWQHSHLTR---HIEDKLSHSNSIHIKLANLKKLLGSEGFRRWNISV 115
>gi|346320106|gb|EGX89707.1| GIY-YIG catalytic domain containing protein [Cordyceps militaris
CM01]
Length = 364
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 15/124 (12%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVYGFPNDISALRFEWAWQHP 78
YIG T +P RR+KQHN G+ GGA +T+ PW+MV +V GFP+ ++AL+FEWA +P
Sbjct: 27 YIGSTPNPPRRLKQHN-GETKGGAARTARDKLRPWEMVALVSGFPSAVAALKFEWALANP 85
Query: 79 KMS------------RRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQWLKPE 126
+S R + R + + + +H++ A + R PLT+ + E
Sbjct: 86 HLSLHIPSEARLAVATRTKRNGRPRRPPLSMRSVVSNIHLLTGVASFARWPLTLHFFAVE 145
Query: 127 YQQV 130
+
Sbjct: 146 AHRA 149
>gi|392865563|gb|EAS31361.2| GIY-YIG catalytic domain-containing protein [Coccidioides immitis
RS]
Length = 383
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 70/146 (47%), Gaps = 25/146 (17%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGA---HKTSNRGPWDMVLI 58
F+ YLL R+ YIG T +P RR+ QHN G GGA HK S R PW+MV++
Sbjct: 27 AFYCAYLL--RSTVRHASLYIGSTPNPARRLAQHN-GLIKGGAKRTHKDSLR-PWEMVML 82
Query: 59 VYGFPNDISALRFEWAWQHPKMSRRLQH------------------VARKKSKETTYTYC 100
V GF + +AL+FEWAWQH SR H R ++
Sbjct: 83 VSGFMSRTAALQFEWAWQHTPSSRHADHEDESSQPPVQIYPRSERRAKRSSRPRSSLKSI 142
Query: 101 LRLLHIMLQTAPWQRLPLTVQWLKPE 126
L+ LH++L++ + PL V + E
Sbjct: 143 LKSLHLLLRSPYFSVWPLEVHFFSAE 168
>gi|303319669|ref|XP_003069834.1| GIY-YIG catalytic domain containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240109520|gb|EER27689.1| GIY-YIG catalytic domain containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 383
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 70/146 (47%), Gaps = 25/146 (17%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGA---HKTSNRGPWDMVLI 58
F+ YLL R+ YIG T +P RR+ QHN G GGA HK S R PW+MV++
Sbjct: 27 AFYCAYLL--RSTVRHASLYIGSTPNPARRLAQHN-GLIQGGAKRTHKVSLR-PWEMVML 82
Query: 59 VYGFPNDISALRFEWAWQHPKMSRRLQH------------------VARKKSKETTYTYC 100
V GF + +AL+FEWAWQH SR H R ++
Sbjct: 83 VSGFMSRTAALQFEWAWQHTPSSRHADHEDESSQPPVRIYPRSERGAKRSSRPRSSLKSI 142
Query: 101 LRLLHIMLQTAPWQRLPLTVQWLKPE 126
L+ LH++L++ + PL V + E
Sbjct: 143 LKSLHLLLRSPYFSVWPLEVHFFSAE 168
>gi|336266648|ref|XP_003348091.1| SLX1 protein [Sordaria macrospora k-hell]
gi|380091026|emb|CCC11232.1| putative SLX1 protein [Sordaria macrospora k-hell]
Length = 392
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 53/82 (64%), Gaps = 5/82 (6%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIV 59
+ VY+L S+ PR+ YIG T P RR+ QHN G GGA++TS + PWDMV +V
Sbjct: 25 ALYTVYILRSQ-PRH-ASLYIGSTPHPPRRLSQHN-GLAKGGAYRTSKKSLRPWDMVCLV 81
Query: 60 YGFPNDISALRFEWAWQHPKMS 81
GFP+ I+AL+FEWA +P S
Sbjct: 82 SGFPSMIAALKFEWALNNPHKS 103
>gi|320034113|gb|EFW16058.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 383
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 70/146 (47%), Gaps = 25/146 (17%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGA---HKTSNRGPWDMVLI 58
F+ YLL R+ YIG T +P RR+ QHN G GGA HK S R PW+MV++
Sbjct: 27 AFYCAYLL--RSTVRHASLYIGSTPNPARRLAQHN-GLIQGGAKRTHKVSLR-PWEMVML 82
Query: 59 VYGFPNDISALRFEWAWQHPKMSRRLQH------------------VARKKSKETTYTYC 100
V GF + +AL+FEWAWQH SR H R ++
Sbjct: 83 VSGFMSRTAALQFEWAWQHTPSSRHADHEDDSSQPPVRIYPRSERRAKRSSRPRSSLKSI 142
Query: 101 LRLLHIMLQTAPWQRLPLTVQWLKPE 126
L+ LH++L++ + PL V + E
Sbjct: 143 LKSLHLLLRSPYFSVWPLEVHFFSAE 168
>gi|310800690|gb|EFQ35583.1| GIY-YIG catalytic domain-containing protein [Glomerella graminicola
M1.001]
Length = 306
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 15/124 (12%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVYGFPNDISALRFEWAWQHP 78
YIG T +P RR+KQHN G+ GGA +TS PW+MV +V GFP ++AL+FEWA +P
Sbjct: 27 YIGSTPNPPRRLKQHN-GEARGGAARTSRLSLRPWEMVGLVSGFPGMVAALKFEWALTNP 85
Query: 79 KMSRRLQHVAR------------KKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQWLKPE 126
+S + +R + + + L L ++L ++R PLT+ + +
Sbjct: 86 HLSLHIPSASRITVSAGVKRNGHPRRPRASLSSILSNLQLLLSVPSFRRWPLTLHFFAKD 145
Query: 127 YQQV 130
+
Sbjct: 146 VHKA 149
>gi|400596856|gb|EJP64612.1| GIY-YIG catalytic domain-containing protein [Beauveria bassiana
ARSEF 2860]
Length = 309
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 15/124 (12%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVYGFPNDISALRFEWAWQHP 78
YIG T +P RR+KQHN G+ GGA +T+ PW+MV +V GFP+ I+AL+FEWA +P
Sbjct: 27 YIGSTPNPPRRLKQHN-GETKGGAARTARDKLRPWEMVALVSGFPSSIAALKFEWALANP 85
Query: 79 KMSRRL------------QHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQWLKPE 126
+S + + R + + + +H++ A + R PLT+ + E
Sbjct: 86 HLSLHIPADERLAVSTQTKRNGRPRRPALSMRSVMSNIHLLTGVASFVRWPLTLHFFAEE 145
Query: 127 YQQV 130
+
Sbjct: 146 AHKA 149
>gi|259511392|sp|B0Y2U0.1|SLX1_ASPFC RecName: Full=Structure-specific endonuclease subunit slx1
gi|159126076|gb|EDP51192.1| GIY-YIG catalytic domain containing protein [Aspergillus
fumigatus A1163]
Length = 423
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/86 (46%), Positives = 55/86 (63%), Gaps = 5/86 (5%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIV 59
+F+ YLL R+ YIG T +P RR+ QHN G GGA +T+ PW+MVL+V
Sbjct: 14 IFYCCYLL--RSTVRHASLYIGSTPNPARRLIQHN-GVVKGGARRTAAEKLRPWEMVLVV 70
Query: 60 YGFPNDISALRFEWAWQHPKMSRRLQ 85
GF + ++AL+FEWAWQ+P SR L+
Sbjct: 71 EGFMSRLAALQFEWAWQNPWYSRHLR 96
>gi|70984986|ref|XP_747999.1| GIY-YIG catalytic domain containing protein [Aspergillus
fumigatus Af293]
gi|74667976|sp|Q4WEL6.1|SLX1_ASPFU RecName: Full=Structure-specific endonuclease subunit slx1
gi|66845627|gb|EAL85961.1| GIY-YIG catalytic domain containing protein [Aspergillus
fumigatus Af293]
Length = 423
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/86 (46%), Positives = 55/86 (63%), Gaps = 5/86 (5%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIV 59
+F+ YLL R+ YIG T +P RR+ QHN G GGA +T+ PW+MVL+V
Sbjct: 14 IFYCCYLL--RSTVRHASLYIGSTPNPARRLIQHN-GVVKGGARRTAAEKLRPWEMVLVV 70
Query: 60 YGFPNDISALRFEWAWQHPKMSRRLQ 85
GF + ++AL+FEWAWQ+P SR L+
Sbjct: 71 EGFMSRLAALQFEWAWQNPWYSRHLR 96
>gi|148685464|gb|EDL17411.1| GIY-YIG domain containing 2, isoform CRA_a [Mus musculus]
Length = 73
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 40/50 (80%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGP 52
F GVYLLY +NPR+ GR Y+G+TV+P RR++QHN G+ GGA +TS RGP
Sbjct: 10 FFGVYLLYCQNPRHRGRVYVGFTVNPARRVRQHNAGRKKGGAWRTSGRGP 59
>gi|212535130|ref|XP_002147721.1| GIY-YIG catalytic domain containing protein [Talaromyces marneffei
ATCC 18224]
gi|259511444|sp|B6QFH5.1|SLX1_PENMQ RecName: Full=Structure-specific endonuclease subunit slx1
gi|210070120|gb|EEA24210.1| GIY-YIG catalytic domain containing protein [Talaromyces marneffei
ATCC 18224]
Length = 389
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 73/142 (51%), Gaps = 21/142 (14%)
Query: 2 VFHGVYLLYS-RNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLI 58
F+ YLL S + P L YIG T DP RR++QHN G GGA +T PW+M+ I
Sbjct: 17 AFYCCYLLRSVKKPSSL---YIGSTPDPARRLEQHN-GFTKGGAKRTERDTLRPWEMITI 72
Query: 59 VYGFPNDISALRFEWAWQHPKMSRRLQHVA------RKKSKE--------TTYTYCLRLL 104
+ GF + AL+FEW+WQH +R + V R+K T+ L L
Sbjct: 73 IEGFTSRTGALQFEWSWQHVHTTRHIGAVETDQLNRRRKDPPVDQGSGIWTSTPKVLGNL 132
Query: 105 HIMLQTAPWQRLPLTVQWLKPE 126
H +L++ + PLTV++L E
Sbjct: 133 HQLLRSTYFGTWPLTVRFLSTE 154
>gi|402081000|gb|EJT76145.1| hypothetical protein GGTG_06067 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 340
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 17/139 (12%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIV 59
+ VY+L S R YIG T +P RR+KQHN G GGA KTS PW+M+ +V
Sbjct: 19 ALYTVYILRSTIRR--ASFYIGSTPNPPRRLKQHN-GHAPGGAAKTSRAKLRPWEMIGLV 75
Query: 60 YGFPNDISALRFEWAWQHPKMSRRL---QHVARKKSKE---------TTYTYCLRLLHIM 107
GFP+ ++AL+FEWA +P M+ + + +++ K K+ + + I+
Sbjct: 76 SGFPSMVAALKFEWALTNPHMTLHIPADERISKGKGKKRNGIPRRPVPCLASIISNVDIL 135
Query: 108 LQTAPWQRLPLTVQWLKPE 126
L+ + R PL + PE
Sbjct: 136 LRVPSFARWPLKLHCFAPE 154
>gi|302837638|ref|XP_002950378.1| hypothetical protein VOLCADRAFT_117506 [Volvox carteri f.
nagariensis]
gi|300264383|gb|EFJ48579.1| hypothetical protein VOLCADRAFT_117506 [Volvox carteri f.
nagariensis]
Length = 183
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 71/135 (52%), Gaps = 17/135 (12%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNR--GPWDMVLIVY 60
F G YLL+S P GRTYIG+T +K H + AH T+ R W M +
Sbjct: 4 FFGCYLLFSLAPEGKGRTYIGWTYG----LKVHGQPPT---AHPTAQRVDKGWGMEDL-- 54
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHI--MLQTAPWQRLPL 118
I AL+FEWAWQHP S ++ +A+ + ++L + ML +PW+ PL
Sbjct: 55 ----KIQALQFEWAWQHPLRSVIVRPIAQALGSKKLQGVRGKILLMLSMLHESPWRHFPL 110
Query: 119 TVQWLKPEYQQVLTE 133
T+Q+L P+Y+ ++ E
Sbjct: 111 TLQYLNPKYEAMIKE 125
>gi|367005416|ref|XP_003687440.1| hypothetical protein TPHA_0J01850 [Tetrapisispora phaffii CBS 4417]
gi|357525744|emb|CCE65006.1| hypothetical protein TPHA_0J01850 [Tetrapisispora phaffii CBS 4417]
Length = 313
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 7/130 (5%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIV 59
+ YLL S R YIG T P RR++QHN GGA++T G PW+M+++V
Sbjct: 24 TLYCCYLLQSIAKR--RSFYIGSTPHPVRRLRQHNGILSRGGAYRTKRDGTRPWEMIVVV 81
Query: 60 YGFPNDISALRFEWAWQHPKMSRRLQHVARKKSKET---TYTYCLRLLHIMLQTAPWQRL 116
YGFPN I+A ++E AWQH + + R S +T T + L ++ ++ +Q +
Sbjct: 82 YGFPNKIAAYQYEHAWQHAYSTHFIAKDERIVSNKTAGRTLHHKLGVIRQLMNNEYFQHM 141
Query: 117 PLTVQWLKPE 126
L V + +
Sbjct: 142 NLNVHFFNSD 151
>gi|367037821|ref|XP_003649291.1| hypothetical protein THITE_2107775 [Thielavia terrestris NRRL 8126]
gi|346996552|gb|AEO62955.1| hypothetical protein THITE_2107775 [Thielavia terrestris NRRL 8126]
Length = 324
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 62/118 (52%), Gaps = 15/118 (12%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVYGFPNDISALRFEWAWQHP 78
YIG T +P RR+KQHN G GGA +TS PW+MV +V GFP+ ++AL+FEWA +P
Sbjct: 27 YIGSTPNPPRRLKQHN-GLVPGGAARTSRSSLRPWEMVALVSGFPSMVAALKFEWALTNP 85
Query: 79 KMSRRLQHVARKKSKETT------------YTYCLRLLHIMLQTAPWQRLPLTVQWLK 124
+S + +R T + LH++L+ + R PL V + +
Sbjct: 86 HLSVHIPSASRLTVATQTKANGRPQRPPRSLASVVANLHLLLRVPSFARWPLRVHFFR 143
>gi|380496493|emb|CCF31730.1| GIY-YIG catalytic domain-containing protein [Colletotrichum
higginsianum]
Length = 307
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 62/117 (52%), Gaps = 15/117 (12%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVYGFPNDISALRFEWAWQHP 78
YIG T +P RR+KQHN G+ GGA +TS PW+MV +V GFP ++AL+FEWA +P
Sbjct: 27 YIGSTPNPPRRLKQHN-GEARGGAARTSRMSLRPWEMVGLVSGFPGMVAALKFEWALNNP 85
Query: 79 KMSRRLQHVAR------------KKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQWL 123
+S + +R + + L L ++L ++R PLT+ +
Sbjct: 86 HLSLHIPSASRITVSNGVKKNGHPRRPRMSLPSILSNLQLLLSVPSFRRWPLTLHFF 142
>gi|403218437|emb|CCK72927.1| hypothetical protein KNAG_0M00740 [Kazachstania naganishii CBS
8797]
Length = 291
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 4/77 (5%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
F+ YLL S N R Y+G T +P +R++QHN GGA++T G PW+MV IVY
Sbjct: 7 FYCCYLLQSVNKR--QSFYVGSTPNPYKRLRQHNGSLVHGGAYRTKRLGARPWEMVGIVY 64
Query: 61 GFPNDISALRFEWAWQH 77
GFP+ I+AL+FE A QH
Sbjct: 65 GFPSRIAALQFEHALQH 81
>gi|255955701|ref|XP_002568603.1| Pc21g15940 [Penicillium chrysogenum Wisconsin 54-1255]
gi|259511443|sp|B6HK90.1|SLX1_PENCW RecName: Full=Structure-specific endonuclease subunit slx1
gi|211590314|emb|CAP96491.1| Pc21g15940 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 403
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIV 59
++ YLL R+ YIG T +P RR+ QHN G GGA +T+ PW+M L+V
Sbjct: 12 AYYCCYLL--RSTVRHASLYIGSTPNPIRRLPQHN-GVAKGGAKRTARDKLRPWEMTLVV 68
Query: 60 YGFPNDISALRFEWAWQHPKMSR 82
GF + + AL+FEWAWQHP+ SR
Sbjct: 69 EGFTSRVGALQFEWAWQHPERSR 91
>gi|116199003|ref|XP_001225313.1| hypothetical protein CHGG_07657 [Chaetomium globosum CBS 148.51]
gi|121780905|sp|Q2GWJ7.1|SLX1_CHAGB RecName: Full=Structure-specific endonuclease subunit SLX1
gi|88178936|gb|EAQ86404.1| hypothetical protein CHGG_07657 [Chaetomium globosum CBS 148.51]
Length = 325
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 15/118 (12%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTS--NRGPWDMVLIVYGFPNDISALRFEWAWQHP 78
Y+G T +P RR+ QHN G GGA +TS N PW+M+++V GFP+ +AL+FEWA +P
Sbjct: 27 YVGSTPNPPRRLSQHN-GLVRGGAVRTSRGNLRPWEMIILVSGFPSATAALKFEWALNNP 85
Query: 79 KMSRRLQHVAR------------KKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQWLK 124
+S + R + + LH++L+ + R PL VQ+
Sbjct: 86 HLSMHIPSAERLVVSTQRNRNGRPRRPAKSLASVASSLHLLLRVPSFARWPLCVQFFN 143
>gi|296817149|ref|XP_002848911.1| GIY-YIG catalytic domain-containing protein [Arthroderma otae CBS
113480]
gi|238839364|gb|EEQ29026.1| GIY-YIG catalytic domain-containing protein [Arthroderma otae CBS
113480]
Length = 395
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 24/149 (16%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
F+ YLL R+ YIG T +P RR+ QHN G+ GGAH+T PW+MV+ V
Sbjct: 25 FYCAYLL--RSTVRHASLYIGSTPNPARRLAQHN-GRIKGGAHRTHKEKLRPWEMVMTVS 81
Query: 61 GFPNDISALRFE--WAWQHPKMSRRLQH----------------VARKKSK-ETTYTYCL 101
GF + AL+F+ WAWQ+ + SR H +A+K S + T +
Sbjct: 82 GFTSRTGALQFDSRWAWQNTQASRHAAHNETDTDVRICSKTGRRIAKKSSSPRESLTRIM 141
Query: 102 RLLHIMLQTAPWQRLPLTVQWLKPEYQQV 130
LH++L++ + PL V++ K + V
Sbjct: 142 ARLHLLLRSPYFSSWPLEVRFFKTDVHLV 170
>gi|154313021|ref|XP_001555837.1| hypothetical protein BC1G_05512 [Botryotinia fuckeliana B05.10]
Length = 391
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 62/116 (53%), Gaps = 16/116 (13%)
Query: 30 RRIKQHNKGKDFGGAHKTS--NRGPWDMVLIVYGFPNDISALRFE-WAWQHPKM------ 80
RR++QHN G GGA +TS N PW+M IV GFP I+AL+F+ WAWQ+P +
Sbjct: 6 RRLRQHN-GLVKGGAVRTSRGNLRPWEMACIVTGFPTSIAALQFDRWAWQNPHITLHIPP 64
Query: 81 SRRLQHVARKKSK------ETTYTYCLRLLHIMLQTAPWQRLPLTVQWLKPEYQQV 130
S R+ H +KK T L LHI+L + R PL +++ P+ +
Sbjct: 65 SSRISHATQKKRSGHPKRPRHTLQSLLSNLHILLTVPSFSRWPLEIKFFAPDVHRA 120
>gi|358392649|gb|EHK42053.1| hypothetical protein TRIATDRAFT_16910, partial [Trichoderma
atroviride IMI 206040]
Length = 301
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 72/143 (50%), Gaps = 17/143 (11%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIV 59
+ VY+L R+ Y+G T +P RR+KQHN G+ GGA +TS PW+M+++V
Sbjct: 10 ALYAVYVL--RSTVRSKSIYVGSTPNPPRRLKQHN-GEAKGGAVRTSRESLRPWEMIVLV 66
Query: 60 YGFPNDISALRFEWAWQHPKMS------RRLQHVARKKSKET------TYTYCLRLLHIM 107
GFP+ ++AL+FEWA +P ++ R+ R+K + + +H++
Sbjct: 67 TGFPSSVAALKFEWALNNPHLTLHIPKEDRITVATRRKKNGMPARSPHSLDSIIPNIHLL 126
Query: 108 LQTAPWQRLPLTVQWLKPEYQQV 130
+ R PL V + + +
Sbjct: 127 TSVPSFARWPLNVHFFSKDAHEA 149
>gi|444321316|ref|XP_004181314.1| hypothetical protein TBLA_0F02560 [Tetrapisispora blattae CBS
6284]
gi|387514358|emb|CCH61795.1| hypothetical protein TBLA_0F02560 [Tetrapisispora blattae CBS
6284]
Length = 324
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 52/78 (66%), Gaps = 4/78 (5%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIV 59
F+ Y+L S + R YIG T +P RR++QHN + GGA++T +G PW+M+ +
Sbjct: 9 TFYCCYILQSLHKR--QSFYIGSTPNPFRRLRQHNGILNKGGAYRTHRQGTRPWEMIACI 66
Query: 60 YGFPNDISALRFEWAWQH 77
+GF ++I+AL+FE AWQH
Sbjct: 67 HGFASNIAALQFEHAWQH 84
>gi|312377551|gb|EFR24360.1| hypothetical protein AND_11106 [Anopheles darlingi]
Length = 271
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
Query: 69 LRFEWAWQHPKMSRRLQ---HVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQWLKP 125
L FEWAWQ P++SRRL+ + +K KET + Y R+L ML+ PW RLPLT++WL
Sbjct: 15 LLFEWAWQQPRVSRRLKQIPEIQKKLRKETNFEYNFRILSEMLRIGPWNRLPLTIRWLAE 74
Query: 126 EY 127
++
Sbjct: 75 DF 76
>gi|85103789|ref|XP_961602.1| hypothetical protein NCU01236 [Neurospora crassa OR74A]
gi|74625335|sp|Q9P737.1|SLX1_NEUCR RecName: Full=Structure-specific endonuclease subunit slx1
gi|7635779|emb|CAB88545.1| conserved hypothetical protein [Neurospora crassa]
gi|28923149|gb|EAA32366.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 402
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 50/147 (34%), Positives = 73/147 (49%), Gaps = 25/147 (17%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
+ VY+L S+ PR+ YIG T P RR+ QHN G GGA++TS PW+MV +V
Sbjct: 16 LYTVYILRSQ-PRH-ASLYIGSTPHPPRRLSQHN-GLAKGGAYRTSKISLRPWNMVCLVS 72
Query: 61 GFPNDISALRFEWAWQHPKMS-----------------RRLQHVARKKSKETTYTYCLRL 103
GFP+ I+AL+FEWA +P S R+ H+ R + LR+
Sbjct: 73 GFPSMIAALKFEWALNNPHKSLHIPAEKRAEAVKGLGRRKTGHLKRPRKSLVGVMEALRM 132
Query: 104 LHIMLQTAPWQRLPLTVQWLKPEYQQV 130
L + + R PL V + + + +V
Sbjct: 133 L---VGVRSFGRWPLRVHFFEEDVWRV 156
>gi|340959740|gb|EGS20921.1| hypothetical protein CTHT_0027600 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 359
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 62/112 (55%), Gaps = 15/112 (13%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTS--NRGPWDMVLIVYGFPNDISALRFEWAWQHP 78
YIG T +P RR+ QHN G GGA KTS N PW+M+ +V GFP+ I+AL+FEWA +P
Sbjct: 27 YIGSTPNPPRRLSQHN-GLVRGGAAKTSRYNLRPWEMIGLVSGFPSAIAALKFEWALTNP 85
Query: 79 KMS------RRLQHVARKKSKET------TYTYCLRLLHIMLQTAPWQRLPL 118
+S R+ ++KS + L LH++L+ + R PL
Sbjct: 86 HVSVHIPSESRISISTQRKSNGQPRRPPRSLASVLANLHLLLRVPSFVRWPL 137
>gi|429861440|gb|ELA36129.1| giy-yig catalytic domain-containing protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 310
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 59/117 (50%), Gaps = 15/117 (12%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVYGFPNDISALRFEWAWQHP 78
YIG T P RR+KQHN G+ GGA +TS PW+MV +V GFP I+AL+FEWA +P
Sbjct: 27 YIGSTPYPPRRLKQHN-GEARGGAARTSRLSLRPWEMVGLVSGFPGSIAALKFEWALTNP 85
Query: 79 KMSRRLQHVAR------------KKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQWL 123
+S + +R + + L L ++L + R PL V +
Sbjct: 86 HLSLHIPSASRIAVSTGVKKNGHPRRPRASLVSILSNLQLLLSVPSFCRWPLKVHFF 142
>gi|336472687|gb|EGO60847.1| hypothetical protein NEUTE1DRAFT_76361 [Neurospora tetrasperma FGSC
2508]
gi|350294077|gb|EGZ75162.1| hypothetical protein NEUTE2DRAFT_155664 [Neurospora tetrasperma
FGSC 2509]
Length = 400
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 50/147 (34%), Positives = 73/147 (49%), Gaps = 25/147 (17%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
+ VY+L S+ PR+ YIG T P RR+ QHN G GGA++TS PW+MV +V
Sbjct: 15 LYTVYILRSQ-PRH-ASLYIGSTPHPPRRLSQHN-GLAKGGAYRTSKISLRPWNMVCLVS 71
Query: 61 GFPNDISALRFEWAWQHPKMS-----------------RRLQHVARKKSKETTYTYCLRL 103
GFP+ I+AL+FEWA +P S R+ H+ R + LR+
Sbjct: 72 GFPSMIAALKFEWALNNPHKSLHIPAEKRAEAVKGLGRRKTGHLKRPRKSLVGVMEALRM 131
Query: 104 LHIMLQTAPWQRLPLTVQWLKPEYQQV 130
L + + R PL V + + + +V
Sbjct: 132 L---VGVRSFGRWPLRVHFFEEDVWRV 155
>gi|367024945|ref|XP_003661757.1| hypothetical protein MYCTH_2301552 [Myceliophthora thermophila ATCC
42464]
gi|347009025|gb|AEO56512.1| hypothetical protein MYCTH_2301552 [Myceliophthora thermophila ATCC
42464]
Length = 319
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 63/118 (53%), Gaps = 15/118 (12%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVYGFPNDISALRFEWAWQHP 78
YIG T +P RR+ QHN G GGA +TS + PW+MV +V GFP+ +AL+FEWA +P
Sbjct: 27 YIGSTPNPPRRLSQHN-GLVPGGAARTSRKDLRPWEMVALVSGFPSMTAALKFEWALNNP 85
Query: 79 KM------SRRLQHVARKKSK------ETTYTYCLRLLHIMLQTAPWQRLPLTVQWLK 124
+ S RL +R K+ + + LH++L+ + R PL V +
Sbjct: 86 HISVHIPTSSRLTVSSRTKTNGQPMRPPKSMASIVSNLHLLLRVPSFARWPLKVHFFN 143
>gi|344231356|gb|EGV63238.1| hypothetical protein CANTEDRAFT_105926 [Candida tenuis ATCC 10573]
Length = 276
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 69/124 (55%), Gaps = 8/124 (6%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
F+ VYLL S PR L YIG T +P RR++QHN G+ GA++T G PW I+
Sbjct: 23 FYTVYLLQS-GPR-LQSFYIGSTPNPCRRLRQHN-GELQSGAYRTRKDGFRPWHFAAIIT 79
Query: 61 GFPNDISALRFEWAWQHPKMSRRL---QHVARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GF + ISAL+FE A QHP +R + + V+R KS + L + +++ + + L
Sbjct: 80 GFSSKISALQFEHALQHPHSTRHIPDNKRVSRSKSGGRSVHLKLANIRLLVSSRYFGHLG 139
Query: 118 LTVQ 121
L V
Sbjct: 140 LCVN 143
>gi|358382336|gb|EHK20008.1| hypothetical protein TRIVIDRAFT_77206 [Trichoderma virens Gv29-8]
Length = 305
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 54/86 (62%), Gaps = 5/86 (5%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVYGFP 63
VY+L R+ YIG T +P RR+KQHN G+ GGA +TS PW+M+++V GFP
Sbjct: 14 VYVL--RSTVRPASIYIGSTPNPPRRLKQHN-GEAKGGAVRTSRDSLRPWEMIMLVSGFP 70
Query: 64 NDISALRFEWAWQHPKMSRRLQHVAR 89
+ +AL+FEWA +P ++ + + R
Sbjct: 71 SSTAALKFEWALNNPHLTLHIPNEER 96
>gi|255719752|ref|XP_002556156.1| KLTH0H06358p [Lachancea thermotolerans]
gi|238942122|emb|CAR30294.1| KLTH0H06358p [Lachancea thermotolerans CBS 6340]
Length = 314
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 67/129 (51%), Gaps = 7/129 (5%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
F+ YLL S + YIG T +P RR++QHN G A++T G PW M+ VY
Sbjct: 15 FYCCYLLRSVPKKQ--SFYIGSTPNPVRRLRQHNGTLANGSAYRTKKTGFRPWRMIACVY 72
Query: 61 GFPNDISALRFEWAWQHPKMSRRL---QHVARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GF + I+AL+FE AWQH ++ + Q + KK+ T + L + ++++ + +
Sbjct: 73 GFTSKIAALQFEHAWQHSNLTHFIDDDQRIVTKKAGGRTIHHKLGNIRLLIKNEFFSYMN 132
Query: 118 LTVQWLKPE 126
L V E
Sbjct: 133 LKVHLFCAE 141
>gi|171693099|ref|XP_001911474.1| hypothetical protein [Podospora anserina S mat+]
gi|259511446|sp|B2B674.1|SLX1_PODAN RecName: Full=Structure-specific endonuclease subunit SLX1
gi|170946498|emb|CAP73299.1| unnamed protein product [Podospora anserina S mat+]
Length = 346
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 59/118 (50%), Gaps = 15/118 (12%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVYGFPNDISALRFEWAWQHP 78
YIG T +P RR+ QHN G GGA +TS PW+MV +V GF + +AL+FEWA +P
Sbjct: 27 YIGSTPNPPRRLSQHN-GVVKGGAVRTSRNSLRPWEMVALVSGFASSTAALKFEWALTNP 85
Query: 79 KMSRRLQHVAR------------KKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQWLK 124
S + +R K + + L LH++L + R PL V + K
Sbjct: 86 HTSLHIPSESRLAFSTQRKRNGQPKRPPKSLSSILSNLHLLLSVPSFARWPLRVHFFK 143
>gi|406605113|emb|CCH43500.1| hypothetical protein BN7_3050 [Wickerhamomyces ciferrii]
Length = 335
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 64/126 (50%), Gaps = 18/126 (14%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
F+G YLL S P+ YIG T DP RR++QHN G+ GA+KT +G PW+M++IV+
Sbjct: 20 FYGCYLLRSI-PKQ-NSFYIGSTPDPVRRLRQHN-GELKAGAYKTKRKGFRPWEMIMIVH 76
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTV 120
GFPN I+AL+ R + H L + ++L + R+ L V
Sbjct: 77 GFPNKIAALQVTRITTSKTAGRSVHHK-------------LGNVRLLLNAPFFNRMNLKV 123
Query: 121 QWLKPE 126
Q E
Sbjct: 124 QIFNSE 129
>gi|258571127|ref|XP_002544367.1| predicted protein [Uncinocarpus reesii 1704]
gi|237904637|gb|EEP79038.1| predicted protein [Uncinocarpus reesii 1704]
Length = 476
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 75/164 (45%), Gaps = 47/164 (28%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
F+ VYLL R+ YIG T +P +R+ QHN G GGA KT N PW+MV+IV
Sbjct: 142 FYCVYLL--RSTVKSTSLYIGSTPNPAKRLAQHN-GIKSGGAKKTHNETLRPWEMVMIVS 198
Query: 61 GFPNDISALRFE------------------WAWQHPKMSRRLQHVARKKSKETTYTY--- 99
GF + +AL+FE W+WQ+ +R HV+++ + T+
Sbjct: 199 GFTSRTAALQFEYATSFPPYLQSGADNALVWSWQY---ARDSPHVSKEDKTLYSKTHRGS 255
Query: 100 ------------------CLRLLHIMLQTAPWQRLPLTVQWLKP 125
L LH++L+T + R PL V++ P
Sbjct: 256 ATGKLTNGNAIPRVSLKGVLTSLHVLLRTPYFSRWPLEVRFFSP 299
>gi|363736873|ref|XP_422551.2| PREDICTED: structure-specific endonuclease subunit SLX1-like
[Gallus gallus]
Length = 201
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 55 MVLIVYGFPNDISALRFEWAWQHPKMSRRLQHV-ARKKSKETTYTYCLRLLHIMLQTAPW 113
M L V+GFP+D++ALRFEWAWQHP SRRLQ R E + LR+L +L PW
Sbjct: 1 MELYVHGFPSDVAALRFEWAWQHPAASRRLQDAKPRPLPGEQPIAFALRMLPRLLWAPPW 60
>gi|426197342|gb|EKV47269.1| hypothetical protein AGABI2DRAFT_117837 [Agaricus bisporus var.
bisporus H97]
Length = 700
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYG 61
+ YLL S + YIG T P R++QHN G GGA T+ PW M L+V+G
Sbjct: 11 TLYACYLLKSLRTARSYKNYIGVTYKPMYRLQQHN-GNRPGGARGTALHRPWAMQLLVHG 69
Query: 62 FPNDISALRFEWAWQHPKMSRRLQHVAR---KKSKETTYTYCLRLLHIMLQTAPWQRLPL 118
FP+ +A+ FE+AWQ+P SR + A + T + + +L M++ P+ + PL
Sbjct: 70 FPSFPAAMLFEYAWQNPHKSRYTRDEAGFLIFEESGRTLRHNIMILQKMIRMFPFSKWPL 129
Query: 119 TVQWLKPE 126
V+ E
Sbjct: 130 HVKLFTKE 137
>gi|409080442|gb|EKM80802.1| hypothetical protein AGABI1DRAFT_126840 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 722
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYG 61
+ YLL S + YIG T P R++QHN G GGA T+ PW M L+V+G
Sbjct: 11 TLYACYLLKSLRTARSYKNYIGVTYKPMYRLQQHN-GNRPGGARGTALHRPWAMQLLVHG 69
Query: 62 FPNDISALRFEWAWQHPKMSRRLQHVAR---KKSKETTYTYCLRLLHIMLQTAPWQRLPL 118
FP+ +A+ FE+AWQ+P SR + A + T + + +L M++ P+ + PL
Sbjct: 70 FPSFPAAMLFEYAWQNPHKSRYTRDEAGFLIFEESGRTLRHNIMILQKMIRMFPFSKWPL 129
Query: 119 TVQWLKPE 126
V+ E
Sbjct: 130 HVKLFTKE 137
>gi|357157710|ref|XP_003577888.1| PREDICTED: uncharacterized protein LOC100842997 [Brachypodium
distachyon]
Length = 180
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 54/109 (49%), Gaps = 15/109 (13%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
VYL+ S + RTY+G T D RR++QHN G+ GGA +S PW++ +V GF N
Sbjct: 69 VYLIASSR---IPRTYVGVTTDFPRRLRQHN-GELKGGAKASSAGRPWNLACLVEGFTNR 124
Query: 66 ISALRFEWAWQH-----------PKMSRRLQHVARKKSKETTYTYCLRL 103
A FE W++ P MS LQH K T+ C RL
Sbjct: 125 SEACEFESKWKNISKKMTRKSSKPGMSSVLQHREAALGKVKTFQDCSRL 173
>gi|395327548|gb|EJF59947.1| hypothetical protein DICSQDRAFT_64131 [Dichomitus squalens
LYAD-421 SS1]
Length = 106
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 20 TYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHPK 79
Y+ +V R QHN G GA KT PW M +IV+GFP+ ++AL+FEWAWQHP
Sbjct: 20 CYLLKSVRTPRSTAQHN-GIISQGAWKTKQNRPWVMQMIVHGFPSKLAALQFEWAWQHPD 78
Query: 80 MSRRLQ 85
+SR L+
Sbjct: 79 ISRHLR 84
>gi|342884725|gb|EGU84915.1| hypothetical protein FOXB_04496 [Fusarium oxysporum Fo5176]
Length = 302
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 5/90 (5%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIV 59
+ VY+L R+ + YIG T P RR+ QHN G GGA +T+ PW+++++V
Sbjct: 10 ALYAVYVL--RSTKRHASIYIGSTPHPPRRLNQHN-GIARGGAVRTAKDTLRPWEVMILV 66
Query: 60 YGFPNDISALRFEWAWQHPKMSRRLQHVAR 89
GFP+ I+AL+FEWA +P ++ + R
Sbjct: 67 TGFPSSIAALKFEWALTNPHLTTHISTEER 96
>gi|308812382|ref|XP_003083498.1| GIY-YIG type nuclease (ISS) [Ostreococcus tauri]
gi|116055379|emb|CAL58047.1| GIY-YIG type nuclease (ISS) [Ostreococcus tauri]
Length = 303
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 55 MVLIVYGFPNDISALRFEWAWQHPKMSRRLQHVARKK---SKETTYTYCLRLLHIMLQTA 111
M+L+V GF ++ SALRFEWAWQ P R + ARK+ + T L ML A
Sbjct: 1 MILVVTGFEDEASALRFEWAWQKPATCRATRDEARKRKLSDRTTAPGKKAECLCAMLGLA 60
Query: 112 PWQRLPLTV 120
PW+ +PLT+
Sbjct: 61 PWRHMPLTL 69
>gi|322712788|gb|EFZ04361.1| hypothetical protein MAA_01435 [Metarhizium anisopliae ARSEF 23]
Length = 228
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 41/54 (75%), Gaps = 3/54 (5%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTS--NRGPWDMVLIVYGFPNDISALRFE 72
YIG T +P RR+KQHN G+ GGA +TS N PW+M+++V GFP+ ++AL+FE
Sbjct: 27 YIGSTPNPPRRLKQHN-GESKGGAARTSRDNLRPWEMIVLVSGFPSMVAALKFE 79
>gi|346703394|emb|CBX25491.1| hypothetical_protein [Oryza glaberrima]
Length = 201
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 55/90 (61%), Gaps = 9/90 (10%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
VYL+ S ++ RTY+G T D RR++QHN G+ GGA +S PW++ ++ GF N
Sbjct: 90 VYLIASS---WIPRTYVGVTTDFPRRLRQHN-GELKGGAKASSAGRPWNLACLIEGFVNR 145
Query: 66 ISALRFEWAWQHPKMSRRLQHVARKKSKET 95
A FE W++ +SR++ ARK+S+ +
Sbjct: 146 SEACEFESKWKN--ISRKM---ARKRSEPS 170
>gi|116778984|gb|ABK21086.1| unknown [Picea sitchensis]
Length = 160
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 60/124 (48%), Gaps = 13/124 (10%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
VYL+ S + R +TY+G T D +RR+KQHN G+ GGA + PW V +V+GF
Sbjct: 34 VYLIISADMR---KTYVGVTTDFERRLKQHN-GELNGGAKASRAGRPWQCVCLVHGFEGR 89
Query: 66 ISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLP-------L 118
A FEW W++ SR +R+ + T L + + A R+ L
Sbjct: 90 SEACGFEWKWKY--FSRNSSRKSRQLDNLNSQTGYFSSLLVQHRQAALDRVKDSFDCRHL 147
Query: 119 TVQW 122
+QW
Sbjct: 148 KIQW 151
>gi|218186423|gb|EEC68850.1| hypothetical protein OsI_37440 [Oryza sativa Indica Group]
Length = 164
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 54/90 (60%), Gaps = 9/90 (10%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
VYL+ S + RTY+G T D RR++QHN G+ GGA +S PW++ ++ GF N
Sbjct: 53 VYLIASSR---ISRTYVGVTTDFPRRLRQHN-GELKGGAKASSAGRPWNLACLIEGFVNR 108
Query: 66 ISALRFEWAWQHPKMSRRLQHVARKKSKET 95
A FE W++ +SR++ ARK+S+ +
Sbjct: 109 SEACEFESKWKN--ISRKM---ARKRSEPS 133
>gi|222616624|gb|EEE52756.1| hypothetical protein OsJ_35194 [Oryza sativa Japonica Group]
Length = 164
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 54/90 (60%), Gaps = 9/90 (10%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
VYL+ S + RTY+G T D RR++QHN G+ GGA +S PW++ ++ GF N
Sbjct: 53 VYLIASSR---ISRTYVGVTTDFPRRLRQHN-GELKGGAKASSAGRPWNLACLIEGFVNR 108
Query: 66 ISALRFEWAWQHPKMSRRLQHVARKKSKET 95
A FE W++ +SR++ ARK+S+ +
Sbjct: 109 SEACEFESKWKN--ISRKM---ARKRSEPS 133
>gi|242082568|ref|XP_002441709.1| hypothetical protein SORBIDRAFT_08g001060 [Sorghum bicolor]
gi|241942402|gb|EES15547.1| hypothetical protein SORBIDRAFT_08g001060 [Sorghum bicolor]
Length = 163
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 53/90 (58%), Gaps = 9/90 (10%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
VYL+ S + RTY+G T D RR++QHN G+ GGA S PW++ +V GF N
Sbjct: 52 VYLIASSR---IPRTYVGVTTDFPRRLRQHN-GELKGGAKAASAGRPWNLACLVEGFANR 107
Query: 66 ISALRFEWAWQHPKMSRRLQHVARKKSKET 95
A FE W++ +SR++ ARK+++ +
Sbjct: 108 SEACEFESKWKN--ISRKM---ARKRTEPS 132
>gi|449467603|ref|XP_004151512.1| PREDICTED: structure-specific endonuclease subunit SLX1-like
[Cucumis sativus]
Length = 170
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
VYL+ S N +TY+G T+D DRR+KQHN G+ GGA T PW ++GF +
Sbjct: 48 VYLIISSNSPI--KTYVGVTLDFDRRLKQHN-GEIKGGAKATRAGRPWICACTIHGFKDQ 104
Query: 66 ISALRFEWAWQHPKMSRRLQHVARKKS 92
A FE W+ K+SR++ + +++
Sbjct: 105 SQACEFESKWK--KVSRKISYEKKEED 129
>gi|218185239|gb|EEC67666.1| hypothetical protein OsI_35089 [Oryza sativa Indica Group]
Length = 204
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 54/90 (60%), Gaps = 9/90 (10%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
VYL+ S + RTY+G T D RR++QHN G+ GGA +S PW++ ++ GF N
Sbjct: 93 VYLIASSR---IPRTYVGVTTDFPRRLRQHN-GELKGGAKASSAGRPWNLACLIEGFVNR 148
Query: 66 ISALRFEWAWQHPKMSRRLQHVARKKSKET 95
A FE W++ +SR++ ARK+S+ +
Sbjct: 149 SEACEFESKWKN--ISRKM---ARKRSEPS 173
>gi|413915885|gb|AFW55817.1| holiday junction resolvase, S1x1p, URI domain nuclease [Zea mays]
Length = 162
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 55/109 (50%), Gaps = 15/109 (13%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
VYL+ S R RTY+G T D RR++QHN G+ GGA +S PW++ +V GF N
Sbjct: 51 VYLIASSRIR---RTYVGVTTDFPRRLRQHN-GELKGGAKASSAGRPWNLACLVEGFANR 106
Query: 66 ISALRFEWAWQ--HPKMSRR---------LQHVARKKSKETTYTYCLRL 103
A FE W+ K++R+ LQH S+ T+ C L
Sbjct: 107 SEACEFESKWKIVSRKIARKRTELSMKSVLQHREAALSRVETFMDCSHL 155
>gi|226505460|ref|NP_001150522.1| holiday junction resolvase, S1x1p, URI domain nuclease [Zea mays]
gi|195639860|gb|ACG39398.1| holiday junction resolvase, S1x1p, URI domain nuclease [Zea mays]
Length = 162
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 55/109 (50%), Gaps = 15/109 (13%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
VYL+ S R RTY+G T D RR++QHN G+ GGA +S PW++ +V GF N
Sbjct: 51 VYLIASSRIR---RTYVGVTTDFPRRLRQHN-GELKGGAKASSAGRPWNLACLVEGFANR 106
Query: 66 ISALRFEWAWQ--HPKMSRR---------LQHVARKKSKETTYTYCLRL 103
A FE W+ K++R+ LQH S+ T+ C L
Sbjct: 107 SEACEFESKWKIVSRKIARKRTELSMKSVLQHREAALSRVETFMDCSHL 155
>gi|392577320|gb|EIW70449.1| hypothetical protein TREMEDRAFT_73470, partial [Tremella
mesenterica DSM 1558]
Length = 270
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 11/83 (13%)
Query: 55 MVLIVYGFPNDISALRFEWAWQHPKMSRRLQ-HVA----------RKKSKETTYTYCLRL 103
M +IVYGFP+ ++AL+FEWAWQ P++SR L+ H A +K K T + +
Sbjct: 1 MQMIVYGFPSKLTALQFEWAWQKPELSRHLRAHDAVTDADLGPLFKKDGKRNHPTQKILV 60
Query: 104 LHIMLQTAPWQRLPLTVQWLKPE 126
H +L +P+ RLPL +++ +
Sbjct: 61 AHSLLNASPFCRLPLHIRFFNKD 83
>gi|299751691|ref|XP_002911673.1| structure-specific endonuclease catalytic subunit [Coprinopsis
cinerea okayama7#130]
gi|298409490|gb|EFI28179.1| structure-specific endonuclease catalytic subunit [Coprinopsis
cinerea okayama7#130]
Length = 121
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 34 QHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKMSRRLQ 85
QHN G+ GA KT N PW M ++V+GFP+ +AL+FEWAWQ+P+ SR L+
Sbjct: 51 QHN-GEVAMGAKKTKNGRPWAMQMLVHGFPSRQAALQFEWAWQNPQKSRYLR 101
>gi|326498227|dbj|BAJ98541.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 185
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 56/109 (51%), Gaps = 15/109 (13%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
VYL+ S + RTY+G T D RR++QHN G+ GGA +S PW++ +V GF N
Sbjct: 74 VYLIASSR---VPRTYVGVTTDFPRRLRQHN-GELKGGAKASSAGRPWNLACLVEGFTNR 129
Query: 66 ISALRFEWAWQH--PKMSRR---------LQHVARKKSKETTYTYCLRL 103
A FE W++ KM+R+ LQH S+ T+ C L
Sbjct: 130 SEACEFESKWKNISKKMTRKRSEPGLNAVLQHREVALSRVKTFLDCDHL 178
>gi|432111667|gb|ELK34764.1| Structure-specific endonuclease subunit SLX1 [Myotis davidii]
Length = 158
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 30/38 (78%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGK 39
F GVYLLY NPR+ GR Y+G+TV+P RR++QHN G+
Sbjct: 12 CFFGVYLLYCLNPRHRGRVYVGFTVNPARRVQQHNGGR 49
>gi|384249074|gb|EIE22556.1| hypothetical protein COCSUDRAFT_63706 [Coccomyxa subellipsoidea
C-169]
Length = 741
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 6/79 (7%)
Query: 55 MVLIVYGFPNDISALRFEWAWQHPKMSRRLQHVAR------KKSKETTYTYCLRLLHIML 108
MVL+VYGFP + AL+FEWAWQHP+ S L+ K++ T LRLL ++L
Sbjct: 1 MVLVVYGFPTKVQALQFEWAWQHPEKSLALREAVATLKGTVKRAGLTGAKGKLRLLELLL 60
Query: 109 QTAPWQRLPLTVQWLKPEY 127
+ W+ PL+VQ+L E+
Sbjct: 61 SSEQWRYFPLSVQFLSSEF 79
>gi|357289961|gb|AET73274.1| hypothetical protein PGAG_00385 [Phaeocystis globosa virus 12T]
gi|357292325|gb|AET73661.1| hypothetical protein PGBG_00350 [Phaeocystis globosa virus 14T]
Length = 125
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 11/84 (13%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNR----GPWDMVLIVYG 61
VY + + N GRTYIG TVD D+RI+QHNK GGAH+TS + W+ V
Sbjct: 5 VYFIEATN----GRTYIGATVDLDKRIRQHNKIIK-GGAHQTSMQVDAGHSWNYHCYVEN 59
Query: 62 FPNDISALRFEWAWQHPKMSRRLQ 85
P +AL+ EW W+ ++SR++Q
Sbjct: 60 CPTWKAALQVEWRWK--QISRQIQ 81
>gi|15612611|ref|NP_240914.1| hypothetical protein BH0048 [Bacillus halodurans C-125]
gi|23396935|sp|Q9KGL3.1|Y048_BACHD RecName: Full=UPF0213 protein BH0048
gi|10172660|dbj|BAB03767.1| BH0048 [Bacillus halodurans C-125]
Length = 94
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 4 HGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFP 63
H VY+L ++ G Y GYT D DRRIK+H GK GA T RGP+ +V + FP
Sbjct: 3 HYVYILECKD----GSWYTGYTTDVDRRIKKHASGK---GAKYTRGRGPFRLV-ATWAFP 54
Query: 64 NDISALRFEWAWQHPKMSRRLQHVARK 90
+ A+R+E+ +H ++ Q V+ K
Sbjct: 55 SKEEAMRWEYEVKHLSRRKKEQLVSLK 81
>gi|71042287|pdb|1ZG2|A Chain A, Solution Nmr Structure Of The Upf0213 Protein Bh0048
From Bacillus Halodurans. Northeast Structural Genomics
Target Bhr2
Length = 107
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 4 HGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFP 63
H VY+L ++ G Y GYT D DRRIK+H GK GA T RGP+ +V + FP
Sbjct: 8 HYVYILECKD----GSWYTGYTTDVDRRIKKHASGK---GAKYTRGRGPFRLV-ATWAFP 59
Query: 64 NDISALRFEWAWQHPKMSRRLQHVARK 90
+ A+R+E+ +H ++ Q V+ K
Sbjct: 60 SKEEAMRWEYEVKHLSRRKKEQLVSLK 86
>gi|147844250|emb|CAN82122.1| hypothetical protein VITISV_009093 [Vitis vinifera]
Length = 1697
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
VYL+ S N +TY+G T + RR+KQHN G+ GGA + PW I+ GF +
Sbjct: 1178 VYLILSTNTPI--KTYVGVTTNFSRRLKQHN-GELKGGAKASRTGRPWVCACIIQGFXDK 1234
Query: 66 ISALRFEWAWQHPKMSRRL 84
A +FE W+ SR+L
Sbjct: 1235 SEACQFESKWK--SFSRKL 1251
>gi|436841936|ref|YP_007326314.1| Excinuclease ABC C subunit domain protein (modular protein)
[Desulfovibrio hydrothermalis AM13 = DSM 14728]
gi|432170842|emb|CCO24213.1| Excinuclease ABC C subunit domain protein (modular protein)
[Desulfovibrio hydrothermalis AM13 = DSM 14728]
Length = 115
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
VYLL ++ Y G T DP RR+++HN G D GA T R P + V FP+
Sbjct: 23 VYLLRCKD----NSLYCGVTTDPGRRLQEHNAG-DGKGARYTRARLPVTLE-AVESFPDK 76
Query: 66 ISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCL 101
+SA + E+A + K R+++ + R+ S E +CL
Sbjct: 77 VSAYKAEYAVKQKKADRKVEFL-RRISVEVNEEHCL 111
>gi|119498865|ref|XP_001266190.1| GIY-YIG catalytic domain containing protein [Neosartorya fischeri
NRRL 181]
gi|259511406|sp|A1CZX3.1|SLX1_NEOFI RecName: Full=Structure-specific endonuclease subunit slx1
gi|119414354|gb|EAW24293.1| GIY-YIG catalytic domain containing protein [Neosartorya fischeri
NRRL 181]
Length = 406
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 5/84 (5%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIV 59
+F+ YLL R+ YIG T +P RR+ QHN G GGA +T+ PW+M+L+V
Sbjct: 14 IFYCCYLL--RSTVRHASLYIGSTPNPARRLVQHN-GVVKGGARRTAAEKLRPWEMLLVV 70
Query: 60 YGFPNDISALRFEWAWQHPKMSRR 83
GF + ++AL+F+ A K R+
Sbjct: 71 EGFTSRLAALQFDSAPAEVKHRRK 94
>gi|224054938|ref|XP_002298390.1| predicted protein [Populus trichocarpa]
gi|222845648|gb|EEE83195.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
VYL+ S N + +TY+G T + RR+KQHN GK GGA + PW I+ GF +
Sbjct: 56 VYLILSTN--HPIKTYVGVTTNFSRRLKQHN-GKLKGGAKASRAGRPWICACIIRGFNDR 112
Query: 66 ISALRFEWAWQ 76
A +FE W+
Sbjct: 113 SEACKFESKWK 123
>gi|225449967|ref|XP_002271242.1| PREDICTED: structure-specific endonuclease subunit slx1 [Vitis
vinifera]
gi|296085104|emb|CBI28599.3| unnamed protein product [Vitis vinifera]
Length = 160
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
VYL+ S N +TY+G T + RR+KQHN G+ GGA + PW I+ GF +
Sbjct: 40 VYLILSTNTPI--KTYVGVTTNFSRRLKQHN-GELKGGAKASRTGRPWVCACIIQGFKDK 96
Query: 66 ISALRFEWAWQHPKMSRRL 84
A +FE W+ SR+L
Sbjct: 97 SEACQFESKWKS--FSRKL 113
>gi|323349809|gb|EGA84024.1| Slx1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 182
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Query: 52 PWDMVLIVYGFPNDISALRFEWAWQHPKMSRRLQH---VARKKSKETTYTYCLRLLHIML 108
PW+M++IV GFP+ I+AL+FE AWQH + + V + K+ T + + L+ ++L
Sbjct: 19 PWEMIMIVRGFPSKIAALQFEHAWQHGYQTHYIAEKDRVVKHKAGGRTLHHKVALMKLLL 78
Query: 109 QTAPWQRLPLTV 120
+ +QR+ L V
Sbjct: 79 KHEFFQRMNLIV 90
>gi|390605173|gb|EIN14564.1| hypothetical protein PUNSTDRAFT_81028, partial [Punctularia
strigosozonata HHB-11173 SS5]
Length = 142
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 55 MVLIVYGFPNDISALRFEWAWQHPKMSRRLQHVARKK--SKETTYTYCLRLLHIMLQTAP 112
M +IV+GFP+ ++AL+FEWAWQHP +SR L+ K S + + M+ + P
Sbjct: 1 MQMIVHGFPSKLAALQFEWAWQHPHISRHLRDEGGKNTLSGGRYLKANVAIARTMVASHP 60
Query: 113 WQRLPLTV 120
+ PL V
Sbjct: 61 YTSWPLRV 68
>gi|224054920|ref|XP_002298387.1| predicted protein [Populus trichocarpa]
gi|222845645|gb|EEE83192.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
VYL+ S N + +TY+G T + RR+KQHN G+ GGA + PW I+ GF +
Sbjct: 56 VYLILSTN--HPIKTYVGVTTNFSRRLKQHN-GELKGGAKASRAGRPWICACIIRGFNDR 112
Query: 66 ISALRFEWAWQ 76
A +FE W+
Sbjct: 113 SEACKFESKWK 123
>gi|297795115|ref|XP_002865442.1| hypothetical protein ARALYDRAFT_494683 [Arabidopsis lyrata subsp.
lyrata]
gi|297311277|gb|EFH41701.1| hypothetical protein ARALYDRAFT_494683 [Arabidopsis lyrata subsp.
lyrata]
Length = 154
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 5 GVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPN 64
VYL+ S +TY+G T D RR+KQHN G+ GGA +S PW I+ GF
Sbjct: 50 SVYLILSTTEPI--KTYVGITTDFARRLKQHN-GEIRGGAKASSAGRPWLCACIITGFTC 106
Query: 65 DISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCL 101
A FE W+ SR+L RK+ +E + + L
Sbjct: 107 LSQASSFESKWKI--FSRKLPR--RKEDEEMSQSDAL 139
>gi|224055063|ref|XP_002298410.1| predicted protein [Populus trichocarpa]
gi|222845668|gb|EEE83215.1| predicted protein [Populus trichocarpa]
Length = 177
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
VYL+ S N +TY+G T + RR+KQHN G+ GGA + PW I+ GF +
Sbjct: 55 VYLILSTNRPI--KTYVGVTTNFSRRLKQHN-GELKGGAKASRAGRPWICACIIRGFNDR 111
Query: 66 ISALRFEWAWQ 76
A +FE W+
Sbjct: 112 SEACKFESKWK 122
>gi|424781037|ref|ZP_18207903.1| hypothetical protein C683_1184 [Catellicoccus marimammalium
M35/04/3]
gi|422842457|gb|EKU26909.1| hypothetical protein C683_1184 [Catellicoccus marimammalium
M35/04/3]
Length = 97
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 6/68 (8%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY-GFPNDISALRFEWAWQHPK 79
Y GYT + +RRIKQHN GK GA T R P ++L Y +PN SAL+ E+A++
Sbjct: 19 YTGYTTNLERRIKQHNSGK---GAKYTRARRP--VILRYYEEYPNASSALKAEYAFKQKT 73
Query: 80 MSRRLQHV 87
++++Q++
Sbjct: 74 RAQKIQYI 81
>gi|15239808|ref|NP_199135.1| endo/excinuclease amino terminal domain-containing protein
[Arabidopsis thaliana]
gi|10177383|dbj|BAB10584.1| unnamed protein product [Arabidopsis thaliana]
gi|332007541|gb|AED94924.1| endo/excinuclease amino terminal domain-containing protein
[Arabidopsis thaliana]
Length = 170
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 5 GVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPN 64
VYL+ S +TY+G T D RR+KQHN G+ GGA +S PW I+ GF
Sbjct: 55 SVYLILSTTEPI--KTYVGITTDFSRRLKQHN-GEIRGGAKASSAGRPWLCACIITGFTC 111
Query: 65 DISALRFEWAWQ 76
A FE W+
Sbjct: 112 LSQASSFESKWK 123
>gi|168051114|ref|XP_001778001.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670649|gb|EDQ57214.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 347
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
VYL+ S + R RTY+G T + RR++QHN G+ GGA T PW +V + G +
Sbjct: 205 VYLILSNDKR---RTYMGATANITRRLRQHN-GELAGGAKSTRGGRPWSLVCTMRGLSSR 260
Query: 66 ISALRFEW 73
A + EW
Sbjct: 261 SEAQQIEW 268
>gi|425772478|gb|EKV10879.1| Structure-specific endonuclease subunit slx1 [Penicillium
digitatum PHI26]
gi|425774910|gb|EKV13201.1| Structure-specific endonuclease subunit slx1 [Penicillium
digitatum Pd1]
Length = 81
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVYGFPNDISALRFE 72
YIG T +P RR+ QHN G GGA +T+ PW+M L+V GF + + AL+FE
Sbjct: 29 YIGSTPNPIRRLPQHN-GVAKGGAKRTARDRLRPWEMTLVVEGFTSRVGALQFE 81
>gi|365987838|ref|XP_003670750.1| hypothetical protein NDAI_0F01890 [Naumovozyma dairenensis CBS 421]
gi|343769521|emb|CCD25507.1| hypothetical protein NDAI_0F01890 [Naumovozyma dairenensis CBS 421]
Length = 241
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 55 MVLIVYGFPNDISALRFEWAWQHPKMSRRL---QHVARKKSKETTYTYCLRLLHIMLQTA 111
MV IVYGFPN ISAL+FE AWQH + + + + + K+ + + L L+ ++L+
Sbjct: 1 MVAIVYGFPNKISALQFEHAWQHGYQTHYISEDERIVKAKNGGRSLHHKLGLIRLLLKHV 60
Query: 112 PWQRLPLTVQWL 123
+Q + L V +
Sbjct: 61 FFQYMNLKVHFF 72
>gi|449527458|ref|XP_004170728.1| PREDICTED: structure-specific endonuclease subunit slx1-like,
partial [Cucumis sativus]
Length = 106
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
VYL+ S N +TY+G T+D DRR+KQHN G+ GGA T PW ++GF
Sbjct: 48 VYLIISSNSPI--KTYVGVTLDFDRRLKQHN-GEIKGGAKATRAGRPWICACTIHGF 101
>gi|297612659|ref|NP_001066136.2| Os12g0143300 [Oryza sativa Japonica Group]
gi|255670044|dbj|BAF29155.2| Os12g0143300 [Oryza sativa Japonica Group]
Length = 112
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPN 64
VYL+ S + RTY+G T D RR++QHN G+ GGA +S PW++ ++ GF N
Sbjct: 53 VYLIASSR---ISRTYVGVTTDFPRRLRQHN-GELKGGAKASSAGRPWNLACLIEGFVN 107
>gi|297727971|ref|NP_001176349.1| Os11g0146550 [Oryza sativa Japonica Group]
gi|255679784|dbj|BAH95077.1| Os11g0146550 [Oryza sativa Japonica Group]
Length = 125
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPN 64
VYL+ S + RTY+G T D RR++QHN G+ GGA +S PW++ ++ GF N
Sbjct: 54 VYLIASSR---IPRTYVGVTTDFPRRLRQHN-GELKGGAKASSAGRPWNLACLIEGFVN 108
>gi|356529850|ref|XP_003533500.1| PREDICTED: structure-specific endonuclease subunit slx1-like
[Glycine max]
Length = 172
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 5 GVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPN 64
VYL+ S N + +TY+G T + RR+KQHN G+ GGA + PW I+ GF +
Sbjct: 49 SVYLILSTN--HPIKTYVGITNNFPRRLKQHN-GELKGGAKASRAGRPWICACIICGFTD 105
Query: 65 DISALRFEWAWQ 76
A FE W+
Sbjct: 106 RSEASVFESKWK 117
>gi|402226010|gb|EJU06070.1| hypothetical protein DACRYDRAFT_112852 [Dacryopinax sp. DJM-731
SS1]
Length = 365
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 66 ISALRFEWAWQHPKMSRRLQ-HVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQWLK 124
I AL+FEWA QHP SR LQ R+K ++ ++++ ML + P+ LPL V L
Sbjct: 7 IQALQFEWALQHPSRSRHLQPQFPRRKH---NLSWIVQVVKTMLMSKPFSVLPLHVTLLD 63
Query: 125 PEYQQVLTE 133
P+ Q V T
Sbjct: 64 PQAQSVWTS 72
>gi|335440013|ref|ZP_08561737.1| Excinuclease ABC C subunit domain protein [Halorhabdus tiamatea
SARL4B]
gi|334889181|gb|EGM27471.1| Excinuclease ABC C subunit domain protein [Halorhabdus tiamatea
SARL4B]
Length = 90
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 4 HGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFP 63
H VY+L + G Y GYT DP+RR+ +HN G+ GA T R P ++V + GF
Sbjct: 8 HYVYVLACAD----GSFYTGYTTDPERRVDEHNDGE---GAKYTRGRTPVELVHL-EGFE 59
Query: 64 NDISALRFEWAWQ 76
+A+ E+A +
Sbjct: 60 TKSAAMSREYAIK 72
>gi|347359735|ref|YP_004849517.1| excinuclease ABC C subunit domain-containing protein
[Desulfovibrio alaskensis G20]
gi|342906267|gb|AEL79408.1| Excinuclease ABC C subunit domain protein [Desulfovibrio
alaskensis G20]
Length = 92
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
VYLL + G Y G T D DRR+ +HN+G GA T +R P + L+ FP+
Sbjct: 5 VYLLACAD----GTQYCGVTTDMDRRLDEHNRG---CGAKYTRSRRPVSL-LVSASFPDR 56
Query: 66 ISALRFEW 73
+A R EW
Sbjct: 57 STAQRVEW 64
>gi|42570335|ref|NP_850142.2| GIY-YIG catalytic domain-containing protein [Arabidopsis thaliana]
gi|330253279|gb|AEC08373.1| GIY-YIG catalytic domain-containing protein [Arabidopsis thaliana]
Length = 334
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 69 LRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQWLKPEY 127
L+FEWAWQHP+ S ++ A + ++L++ ML W L LTV + +Y
Sbjct: 58 LQFEWAWQHPRESVAVREAAAAFKSFSGVASKIKLVYTMLNLPAWNSLNLTVNYFSSKY 116
>gi|319938776|ref|ZP_08013140.1| GIY-YIG catalytic domain-containing protein [Streptococcus
anginosus 1_2_62CV]
gi|319811826|gb|EFW08092.1| GIY-YIG catalytic domain-containing protein [Streptococcus
anginosus 1_2_62CV]
Length = 85
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY--GFPNDISALRFEWAW 75
G Y GYT D +R+ HN GK GA T R P V ++Y FPN SA+ E +
Sbjct: 15 GSLYTGYTTDVKKRVDTHNAGK---GAKYTRARLP---VTLLYQEEFPNKPSAMSAEALF 68
Query: 76 QHPKMSRRLQHVARKK 91
+ ++L+++A KK
Sbjct: 69 KRKTRQQKLEYIADKK 84
>gi|345888355|ref|ZP_08839449.1| hypothetical protein HMPREF0178_02223 [Bilophila sp. 4_1_30]
gi|345040807|gb|EGW45032.1| hypothetical protein HMPREF0178_02223 [Bilophila sp. 4_1_30]
Length = 89
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
VYLL + Y G T D +RR+++HN G+ GA T R P ++V V P+
Sbjct: 4 VYLLRCAD----ATLYCGVTTDMERRLREHNAGRR--GAKYTRARRPVELVCCV-AQPDA 56
Query: 66 ISALRFEW-AWQHPKMSRRLQHVARKK 91
SA R EW Q P+ + +AR +
Sbjct: 57 SSACRLEWEVKQRPRAEKAAFLLARAE 83
>gi|89101178|ref|ZP_01174010.1| hypothetical protein B14911_01506 [Bacillus sp. NRRL B-14911]
gi|89084113|gb|EAR63282.1| hypothetical protein B14911_01506 [Bacillus sp. NRRL B-14911]
Length = 95
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 14/82 (17%)
Query: 4 HGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYG-- 61
H Y+L R+ G Y GYT D DRR++ HN+GK A T RGP V++VY
Sbjct: 6 HYFYVLKCRD----GSLYAGYTNDLDRRVRLHNEGK---AAKYTRGRGP---VVLVYHQV 55
Query: 62 FPNDISALRFEWAWQHPKMSRR 83
F A+R E +Q ++SR+
Sbjct: 56 FSGKTEAMRAE--YQFKQLSRK 75
>gi|417918927|ref|ZP_12562471.1| GIY-YIG catalytic domain protein [Streptococcus australis ATCC
700641]
gi|342835078|gb|EGU69335.1| GIY-YIG catalytic domain protein [Streptococcus australis ATCC
700641]
Length = 94
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY--GFPNDISALRFEWAW 75
G Y GYT D +RRIK HN GK GA T R P V ++Y FP+ +A+ E +
Sbjct: 15 GTLYTGYTTDIERRIKTHNAGK---GAKYTRPRLP---VTLIYQESFPDKRAAMSAEALF 68
Query: 76 QHPKMSRRLQHVARKKSK 93
+ +L ++ ++SK
Sbjct: 69 KRKSREEKLTYIKHQQSK 86
>gi|421490413|ref|ZP_15937785.1| GIY-YIG catalytic domain protein [Streptococcus anginosus SK1138]
gi|400372903|gb|EJP25838.1| GIY-YIG catalytic domain protein [Streptococcus anginosus SK1138]
Length = 85
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY--GFPNDISALRFEWAW 75
G Y GYT D +R+ HN GK GA T R P V ++Y FPN SA+ E +
Sbjct: 15 GSLYTGYTTDVKKRLYTHNTGK---GAKYTRTRLP---VTLLYQEEFPNKPSAMSAEALF 68
Query: 76 QHPKMSRRLQHVARKK 91
+ ++L+++A KK
Sbjct: 69 KRKTRQQKLEYIADKK 84
>gi|319947371|ref|ZP_08021604.1| endo/exonuclease amino terminal GIY-YIG domain protein
[Streptococcus australis ATCC 700641]
gi|319746613|gb|EFV98873.1| endo/exonuclease amino terminal GIY-YIG domain protein
[Streptococcus australis ATCC 700641]
Length = 115
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY--GFPNDISALRFEWAW 75
G Y GYT D +RRIK HN GK GA T R P V ++Y FP+ +A+ E +
Sbjct: 19 GTLYTGYTTDIERRIKTHNAGK---GAKYTRPRLP---VTLIYQESFPDKRAAMSAEALF 72
Query: 76 QHPKMSRRLQHVARKKSK 93
+ +L ++ ++SK
Sbjct: 73 KRKSREEKLTYIKHQQSK 90
>gi|313888328|ref|ZP_07821999.1| GIY-YIG catalytic domain protein [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312845731|gb|EFR33121.1| GIY-YIG catalytic domain protein [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 98
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
VY+L + G Y GYT+D D+R+K HN+GK + T+ R P +MV
Sbjct: 5 VYILKCSD----GSLYTGYTLDLDKRLKTHNEGK---ASKYTATRLPVEMVFSEECLDKS 57
Query: 66 ISALRFEWAWQHPKMSRRLQHVARKKSKETTY 97
AL+ E+ + +L+ + +KKS + Y
Sbjct: 58 -DALKKEYFIKTLTKDNKLKLIDKKKSLQDLY 88
>gi|242279763|ref|YP_002991892.1| excinuclease ABC subunit C [Desulfovibrio salexigens DSM 2638]
gi|242122657|gb|ACS80353.1| Excinuclease ABC C subunit domain protein [Desulfovibrio
salexigens DSM 2638]
Length = 86
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKM 80
Y G T DP+RR+++HN GK GA T R P + FP+ +A R E+A + K
Sbjct: 17 YCGVTTDPERRLEEHNSGK---GAKYTRCRLPVEFEAYE-AFPDKRAAYRAEYAVKRKKA 72
Query: 81 SRRLQHV 87
++++ ++
Sbjct: 73 AQKVDYL 79
>gi|297624256|ref|YP_003705690.1| excinuclease ABC subunit C domain-containing protein [Truepera
radiovictrix DSM 17093]
gi|297165436|gb|ADI15147.1| Excinuclease ABC C subunit domain protein [Truepera radiovictrix
DSM 17093]
Length = 92
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
VY+L R+ G Y G T DP RR+ +HN G+ GA T GP ++V + +
Sbjct: 5 VYVLRCRS----GALYTGVTTDPLRRLTEHNAGR---GAAFTKRHGPAELVYL-EAAESR 56
Query: 66 ISALRFEWAWQHPKMSRRLQHVA 88
+ALR E A + +R+L+ VA
Sbjct: 57 GAALRREHAIKRLSRARKLELVA 79
>gi|239908280|ref|YP_002955021.1| hypothetical protein DMR_36440 [Desulfovibrio magneticus RS-1]
gi|239798146|dbj|BAH77135.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 92
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKM 80
Y G T D DRRI +HN G GGA T NR P +VL F N A R E+ + +
Sbjct: 16 YCGITCDMDRRINEHN-GLQPGGARYTRNRRPVRLVLSAI-FENRSEASRAEYKIKMTRK 73
Query: 81 SRRLQ 85
+++Q
Sbjct: 74 GKKVQ 78
>gi|347522080|ref|YP_004779651.1| hypothetical protein LCGT_1474 [Lactococcus garvieae ATCC 49156]
gi|385833465|ref|YP_005871240.1| hypothetical protein [Lactococcus garvieae Lg2]
gi|343180648|dbj|BAK58987.1| conserved hypothetical protein [Lactococcus garvieae ATCC 49156]
gi|343182618|dbj|BAK60956.1| conserved hypothetical protein [Lactococcus garvieae Lg2]
Length = 99
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHP-K 79
Y GYT D +R++ HN GK GA T R P ++ V F + AL+ EW ++H
Sbjct: 17 YCGYTDDVTKRLETHNSGK---GAKYTKARRPLQLLTSV-EFSDKKRALKCEWWFKHKLN 72
Query: 80 MSRRLQHVARKKSKET 95
S++L+ + K KET
Sbjct: 73 RSQKLKLIKEKTIKET 88
>gi|319654962|ref|ZP_08009036.1| hypothetical protein HMPREF1013_05658 [Bacillus sp. 2_A_57_CT2]
gi|317393387|gb|EFV74151.1| hypothetical protein HMPREF1013_05658 [Bacillus sp. 2_A_57_CT2]
Length = 94
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 4 HGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFP 63
H Y+L+ R+ G Y GYT D ++R+K HN+GK GA T RGP ++V F
Sbjct: 5 HYFYVLHCRD----GSLYAGYTNDLEKRVKAHNEGK---GAKYTRGRGPVELVF-SRPFL 56
Query: 64 NDISALRFEWAWQ 76
A+R E+ ++
Sbjct: 57 EKGEAMRAEYEFK 69
>gi|312864588|ref|ZP_07724819.1| GIY-YIG catalytic domain protein [Streptococcus downei F0415]
gi|311099715|gb|EFQ57928.1| GIY-YIG catalytic domain protein [Streptococcus downei F0415]
Length = 335
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQH 77
G Y GYT D D+R+ HN GK GA T +R P D+ L F + +A+ E ++
Sbjct: 263 GSLYTGYTTDLDKRLATHNAGK---GAKYTKSRLPVDL-LYYETFNHKNAAMSAEAKFKL 318
Query: 78 PKMSRRLQHVARKKSKE 94
+L+++ K+KE
Sbjct: 319 KTRDEKLEYIQEHKNKE 335
>gi|429205309|ref|ZP_19196586.1| endonuclease, GIY-YIG type [Lactobacillus saerimneri 30a]
gi|428146381|gb|EKW98620.1| endonuclease, GIY-YIG type [Lactobacillus saerimneri 30a]
Length = 89
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQH 77
G Y GYT D + R+ HN+GK GA T +R P M+ F + SAL+ E+ ++H
Sbjct: 17 GTLYGGYTTDLEHRLLMHNQGK---GAKYTRSRRPVQMIYHE-NFADKSSALKAEYQFKH 72
Query: 78 PKMSRRLQHVARKKSK 93
++L ++ + K K
Sbjct: 73 QSRQKKLAYLRQHKVK 88
>gi|335031727|ref|ZP_08525151.1| GIY-YIG catalytic domain protein [Streptococcus anginosus SK52 =
DSM 20563]
gi|333768875|gb|EGL46034.1| GIY-YIG catalytic domain protein [Streptococcus anginosus SK52 =
DSM 20563]
Length = 85
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY--GFPNDISALRFEWAW 75
G Y GYT D +R+ HN GK GA T R P V ++Y FP+ SA+ E +
Sbjct: 15 GSLYTGYTTDVKKRVDTHNAGK---GAKYTRARLP---VTLLYQEEFPDKPSAMSAEALF 68
Query: 76 QHPKMSRRLQHVARKK 91
+ ++L+++A KK
Sbjct: 69 KRKTRQQKLEYIADKK 84
>gi|410457417|ref|ZP_11311228.1| GIY-YIG nuclease superfamily protein [Bacillus bataviensis LMG
21833]
gi|409925219|gb|EKN62441.1| GIY-YIG nuclease superfamily protein [Bacillus bataviensis LMG
21833]
Length = 95
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 10/80 (12%)
Query: 4 HGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFP 63
H Y++ R+ G Y GYT + +RRI HNKGK GA T +RGP ++ G+
Sbjct: 6 HFFYVVTCRD----GSLYAGYTNNLERRINLHNKGK---GAKYTRSRGPVELTFYK-GYD 57
Query: 64 NDISALRFEWAWQHPKMSRR 83
N A+ E+ ++ ++SR+
Sbjct: 58 NKSEAMSAEYHFK--RLSRK 75
>gi|373859301|ref|ZP_09602031.1| Excinuclease ABC C subunit domain protein [Bacillus sp. 1NLA3E]
gi|372450970|gb|EHP24451.1| Excinuclease ABC C subunit domain protein [Bacillus sp. 1NLA3E]
Length = 94
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 12/75 (16%)
Query: 4 HGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY--G 61
H Y+L R+ G Y GYT +RRI QHN+GK GA T RGP V+++Y
Sbjct: 5 HYFYVLECRD----GSFYGGYTNHLERRIMQHNEGK---GAKYTRGRGP---VVLLYNKA 54
Query: 62 FPNDISALRFEWAWQ 76
F N AL+ E+ ++
Sbjct: 55 FENKSEALKAEYEFK 69
>gi|56961838|ref|YP_173560.1| hypothetical protein ABC0056 [Bacillus clausii KSM-K16]
gi|56908072|dbj|BAD62599.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
Length = 87
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 4 HGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFP 63
H +Y+L ++ G Y GYT +R+ H GK GA T RGP+ +V FP
Sbjct: 3 HVMYVLECKD----GSWYTGYTNHLQKRLAMHEAGK---GAKYTRGRGPFTLVFFE-EFP 54
Query: 64 NDISALRFEWAWQHPKMSRRLQHVARKKSKE 94
A+R E+A++ + ++A ++ +E
Sbjct: 55 TKEEAMRCEYAFKQLSKKEKQLYIAMRRKEE 85
>gi|403238468|ref|ZP_10917054.1| GIY-YIG nuclease superfamily protein [Bacillus sp. 10403023]
Length = 99
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQH 77
G Y GYT D R+K+HN+GK GA T RGP + L F A+R E+ ++
Sbjct: 16 GTFYAGYTTDVGERLKKHNEGK---GAKYTRGRGPITL-LFAQEFETKEEAMRAEYRFKQ 71
Query: 78 PK 79
K
Sbjct: 72 LK 73
>gi|315223193|ref|ZP_07865054.1| GIY-YIG nuclease family protein [Streptococcus anginosus F0211]
gi|315187625|gb|EFU21379.1| GIY-YIG nuclease family protein [Streptococcus anginosus F0211]
Length = 85
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY--GFPNDISALRFEWAW 75
G Y GYT D +R+ HN GK GA T R P V ++Y FP+ SA+ E +
Sbjct: 15 GSLYTGYTTDVKKRLYTHNTGK---GAKYTRTRLP---VTLLYQEEFPDKPSAMSAEALF 68
Query: 76 QHPKMSRRLQHVARKK 91
+ ++L+++A KK
Sbjct: 69 KRKTRQQKLEYIADKK 84
>gi|399575992|ref|ZP_10769749.1| endonuclease containing a uri domain protein [Halogranum salarium
B-1]
gi|399238703|gb|EJN59630.1| endonuclease containing a uri domain protein [Halogranum salarium
B-1]
Length = 80
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 10/81 (12%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
H VY++ R+ Y Y GYT D +RR+ +HN G GA T R P D+ VY
Sbjct: 1 MHYVYIVECRDDSY----YTGYTTDVERRVSEHNDGT---GAKYTRGRTPVDL---VYTE 50
Query: 63 PNDISALRFEWAWQHPKMSRR 83
D + ++ +++RR
Sbjct: 51 SYDSKSAAMSREYEIKQLTRR 71
>gi|365154908|ref|ZP_09351306.1| hypothetical protein HMPREF1015_02813 [Bacillus smithii
7_3_47FAA]
gi|363629019|gb|EHL79712.1| hypothetical protein HMPREF1015_02813 [Bacillus smithii
7_3_47FAA]
Length = 91
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 10/80 (12%)
Query: 4 HGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFP 63
H Y+L S + G Y GYT D RR++QHN GK GA T ++GP ++ F
Sbjct: 7 HYFYVLKSGD----GSFYGGYTTDVQRRVRQHNDGK---GAKYTRSKGPVKLIYTE-AFE 58
Query: 64 NDISALRFEWAWQHPKMSRR 83
ALR E+ ++ K++R+
Sbjct: 59 TKGEALRAEYRFK--KLTRK 76
>gi|418965066|ref|ZP_13516853.1| GIY-YIG catalytic domain protein [Streptococcus constellatus
subsp. constellatus SK53]
gi|383343899|gb|EID22071.1| GIY-YIG catalytic domain protein [Streptococcus constellatus
subsp. constellatus SK53]
Length = 85
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY--GFPNDISALRFEWAW 75
G Y GYT D +R+ +HN GK GA T R P V ++Y FP+ SA+ E +
Sbjct: 15 GSLYTGYTTDIKKRLHKHNAGK---GAKYTRARLP---VTLLYQEEFPDKPSAMSAEALF 68
Query: 76 QHPKMSRRLQHVARKK 91
+ ++L+++A KK
Sbjct: 69 KRKTRQQKLEYIADKK 84
>gi|378727721|gb|EHY54180.1| hypothetical protein HMPREF1120_02355 [Exophiala dermatitidis
NIH/UT8656]
Length = 355
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 55 MVLIVYGFPNDISALRFEWAWQHPKMSRRL 84
M IV GFP++I+AL+FEWAW + ++R +
Sbjct: 1 MACIVAGFPSNIAALQFEWAWHNAHLTRHI 30
>gi|420143052|ref|ZP_14650556.1| Hypothetical protein Y7C_90606 [Lactococcus garvieae IPLA 31405]
gi|391856998|gb|EIT67531.1| Hypothetical protein Y7C_90606 [Lactococcus garvieae IPLA 31405]
Length = 99
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHP-K 79
Y GYT D +R++ HN GK GA T R P ++ V F + AL+ EW ++H
Sbjct: 17 YCGYTDDVTKRLETHNSGK---GAKYTKARRPLQLLTSV-EFSDKKRALKCEWWFKHKLN 72
Query: 80 MSRRLQHVARKKSKET 95
S++L+ + + KET
Sbjct: 73 RSQKLKLIKERAIKET 88
>gi|73539380|ref|YP_299747.1| excinuclease ABC subunit C [Ralstonia eutropha JMP134]
gi|123622166|sp|Q46PN1.1|Y5558_RALEJ RecName: Full=UPF0213 protein Reut_B5558
gi|72122717|gb|AAZ64903.1| Excinuclease ABC, C subunit, N-terminal [Ralstonia eutropha
JMP134]
Length = 90
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQH 77
G Y G T D RR QH GK GA T +R P VL FP+ AL+ E A +
Sbjct: 17 GSIYTGITTDVARRFAQHQAGK---GAKYTRSRKPLR-VLGQVAFPSKSEALKAELATKR 72
Query: 78 PKMSRRLQHVARKKSKET 95
++++ A+ + ET
Sbjct: 73 MSSAQKIAFCAKLEQPET 90
>gi|357636404|ref|ZP_09134279.1| methyltransferase small domain protein [Streptococcus macacae NCTC
11558]
gi|357584858|gb|EHJ52061.1| methyltransferase small domain protein [Streptococcus macacae NCTC
11558]
Length = 340
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY--GFPNDISALRFEWAWQHP 78
Y GYT D +R+ HN GK GA T R P V ++Y FP +A+R E ++
Sbjct: 268 YTGYTTDIKKRVSTHNSGK---GAKYTKARLP---VELIYWEEFPTKEAAMRAESIFKQK 321
Query: 79 KMSRRLQHVARKKSKET 95
+++L ++ +K K +
Sbjct: 322 TRAQKLNYIEEQKQKNS 338
>gi|308812384|ref|XP_003083499.1| Predicted 2-oxoglutarate dehydrogenase, E1 subunit (ISS)
[Ostreococcus tauri]
gi|116055380|emb|CAL58048.1| Predicted 2-oxoglutarate dehydrogenase, E1 subunit (ISS), partial
[Ostreococcus tauri]
Length = 1210
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTS 48
H YL+ S + G++Y+GYT++P RR+ QHN G GA T+
Sbjct: 1165 LHACYLVISLDATKRGKSYVGYTINPPRRLAQHN-GALANGARYTA 1209
>gi|337269795|ref|YP_004613850.1| excinuclease ABC subunit C [Mesorhizobium opportunistum WSM2075]
gi|336030105|gb|AEH89756.1| Excinuclease ABC C subunit domain protein [Mesorhizobium
opportunistum WSM2075]
Length = 80
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
VYLL S G YIG T D RR+ +HN GK + TS PW +V V F N
Sbjct: 4 VYLLESMAVG--GERYIGVTADLKRRVAEHNAGK----SSHTSKFLPWRIVTYV-AFSNQ 56
Query: 66 ISALRFE 72
A+ FE
Sbjct: 57 AKAVSFE 63
>gi|407776291|ref|ZP_11123571.1| hypothetical protein TH2_20299 [Thalassospira profundimaris
WP0211]
gi|407280698|gb|EKF06274.1| hypothetical protein TH2_20299 [Thalassospira profundimaris
WP0211]
Length = 86
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
VY+L S ++ R YIG T D +R+ +HN + G+ T+N GPW ++ +GF +
Sbjct: 7 VYILQSL--KFPERYYIGCTRDVAKRLYRHNNEPNSSGSKHTANFGPWK-IINTFGFEDA 63
Query: 66 ISALRFE 72
A FE
Sbjct: 64 NKAFAFE 70
>gi|406659255|ref|ZP_11067393.1| endo/exonuclease amino terminal GIY-YIG domain protein
[Streptococcus iniae 9117]
gi|405577364|gb|EKB51512.1| endo/exonuclease amino terminal GIY-YIG domain protein
[Streptococcus iniae 9117]
Length = 92
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 9/79 (11%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY--GFPNDISALRFEWAW 75
G Y GYT + +RR+K HN GK GA T R P V ++Y FP+ A+ E +
Sbjct: 16 GTLYTGYTTNLERRLKMHNSGK---GAKYTKARIP---VTLIYSESFPSKQEAMSAEALF 69
Query: 76 QHPKM-SRRLQHVARKKSK 93
+ K +++L ++A+ +SK
Sbjct: 70 KKRKNRAQKLAYIAQHQSK 88
>gi|225868915|ref|YP_002744863.1| hypothetical protein SZO_13490 [Streptococcus equi subsp.
zooepidemicus]
gi|225702191|emb|CAW99909.1| conserved hypothetical protein [Streptococcus equi subsp.
zooepidemicus]
Length = 93
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKM 80
Y GYT D D+R+K HN GK GA T R P + L F + +A+R E ++
Sbjct: 19 YTGYTTDLDKRLKAHNAGK---GAKYTRCRLPVSL-LYYESFDSKQAAMRAEALFKKRNT 74
Query: 81 -SRRLQHVARKKSKET 95
++L ++A ++SK++
Sbjct: 75 RQQKLTYIAEQQSKKS 90
>gi|343525340|ref|ZP_08762295.1| GIY-YIG catalytic domain protein [Streptococcus constellatus
subsp. pharyngis SK1060 = CCUG 46377]
gi|343395610|gb|EGV08148.1| GIY-YIG catalytic domain protein [Streptococcus constellatus
subsp. pharyngis SK1060 = CCUG 46377]
Length = 97
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY--GFPNDISALRFEWAW 75
G Y GYT D +R+ HN GK GA T R P V ++Y FP+ SA+ E +
Sbjct: 27 GSLYTGYTTDIKKRLHIHNAGK---GAKYTRARLP---VTLLYQEEFPDKPSAMSAEALF 80
Query: 76 QHPKMSRRLQHVARKK 91
+ ++L+++A KK
Sbjct: 81 KRKTRQQKLEYIANKK 96
>gi|433637055|ref|YP_007282815.1| putative endonuclease containing a URI domain [Halovivax ruber
XH-70]
gi|433288859|gb|AGB14682.1| putative endonuclease containing a URI domain [Halovivax ruber
XH-70]
Length = 82
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 1 MVFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
M H VY+L+ + G Y GYT D DRR+ +HN G+ GA T +R P ++V V
Sbjct: 1 MSRHVVYVLHCAD----GTLYTGYTTDLDRRVAEHNAGE---GAKYTRSRTPVEVVH-VE 52
Query: 61 GFPNDISALRFEW 73
F + +A+ E+
Sbjct: 53 RFDSRSAAMSREY 65
>gi|404451857|ref|ZP_11016808.1| Putative endonuclease, partial [Indibacter alkaliphilus LW1]
gi|403762402|gb|EJZ23469.1| Putative endonuclease, partial [Indibacter alkaliphilus LW1]
Length = 127
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 10/85 (11%)
Query: 1 MVFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHK-TSNRGPWDMVLIV 59
M F+ +Y+LYS + Y+G++ DP RRI +HN GK HK TS+ PW++ +
Sbjct: 38 MTFY-IYILYSEK---FDKYYVGHSDDPWRRINEHNHGK----FHKFTSDYRPWEIAAVF 89
Query: 60 YGFPNDISALRFEWAWQHPKMSRRL 84
+ +AL+ E W + SR+L
Sbjct: 90 RVGDDRGTALKTE-KWIKKQKSRKL 113
>gi|398825317|ref|ZP_10583618.1| putative endonuclease containing a URI domain containing protein
[Bradyrhizobium sp. YR681]
gi|398223925|gb|EJN10253.1| putative endonuclease containing a URI domain containing protein
[Bradyrhizobium sp. YR681]
Length = 80
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 7 YLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDI 66
Y+ R+ + + YIG T D RR+ +HN GK AH T+ PW +V FP+ +
Sbjct: 3 YVYIIRSIEFPDQEYIGATEDLKRRLPEHNAGK---SAH-TAKFKPWKLVWYC-AFPDKM 57
Query: 67 SALRFE 72
AL FE
Sbjct: 58 KALAFE 63
>gi|404452015|ref|ZP_11016932.1| Putative endonuclease, partial [Indibacter alkaliphilus LW1]
gi|403762207|gb|EJZ23365.1| Putative endonuclease, partial [Indibacter alkaliphilus LW1]
Length = 122
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 10/85 (11%)
Query: 1 MVFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHK-TSNRGPWDMVLIV 59
M F+ +Y+LYS + Y+G++ DP RRI +HN GK HK TS+ PW++ +
Sbjct: 23 MTFY-IYILYSEK---FNKYYVGHSDDPWRRINEHNHGK----FHKFTSDYRPWEIAAVF 74
Query: 60 YGFPNDISALRFEWAWQHPKMSRRL 84
+ +AL+ E W + SR+L
Sbjct: 75 RVGDDRGTALKTE-KWIKKQKSRKL 98
>gi|115522470|ref|YP_779381.1| excinuclease ABC subunit C [Rhodopseudomonas palustris BisA53]
gi|115516417|gb|ABJ04401.1| Excinuclease ABC, C subunit domain protein [Rhodopseudomonas
palustris BisA53]
Length = 91
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Query: 7 YLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDI 66
Y+ R+ + + Y G T DP +RI HN GK + TS PW + FP+
Sbjct: 3 YVYIIRSVSFPDQVYTGATADPKQRIADHNAGK----SPHTSKFTPWKLCWYC-AFPDKF 57
Query: 67 SALRFE 72
AL FE
Sbjct: 58 KALEFE 63
>gi|381210598|ref|ZP_09917669.1| hypothetical protein LGrbi_11788 [Lentibacillus sp. Grbi]
Length = 98
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
Query: 4 HGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFP 63
H VY+L + + Y GYT D + R++ H +GK GA T RGP+ V+ V F
Sbjct: 7 HTVYILKCADNTF----YTGYTNDLEHRVQMHEEGK---GAKYTRGRGPF-QVVFVESFE 58
Query: 64 NDISALRFEWAWQHPKMSRRLQHVARKKSKE 94
A+R E + K + Q + R K KE
Sbjct: 59 TKEEAMRREHEIKQLKRKGKAQ-LIRDKLKE 88
>gi|116512698|ref|YP_811605.1| endonuclease [Lactococcus lactis subsp. cremoris SK11]
gi|125624785|ref|YP_001033268.1| hypothetical protein llmg_2010 [Lactococcus lactis subsp.
cremoris MG1363]
gi|385837568|ref|YP_005875198.1| endonuclease like protein [Lactococcus lactis subsp. cremoris
A76]
gi|389855163|ref|YP_006357407.1| putative endonuclease [Lactococcus lactis subsp. cremoris NZ9000]
gi|414074849|ref|YP_007000066.1| GIY-YIG nuclease superfamily protein [Lactococcus lactis subsp.
cremoris UC509.9]
gi|122940001|sp|Q02X30.1|Y2011_LACLS RecName: Full=UPF0213 protein LACR_2011
gi|166980257|sp|A2RMP4.1|Y2010_LACLM RecName: Full=UPF0213 protein llmg_2010
gi|116108352|gb|ABJ73492.1| Predicted endonuclease, URI domain [Lactococcus lactis subsp.
cremoris SK11]
gi|124493593|emb|CAL98578.1| conserved hypothetical protein [Lactococcus lactis subsp.
cremoris MG1363]
gi|300071585|gb|ADJ60985.1| putative endonuclease [Lactococcus lactis subsp. cremoris NZ9000]
gi|358748796|gb|AEU39775.1| endonuclease like protein [Lactococcus lactis subsp. cremoris
A76]
gi|413974769|gb|AFW92233.1| GIY-YIG nuclease superfamily protein [Lactococcus lactis subsp.
cremoris UC509.9]
Length = 98
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHP 78
Y GYT D ++R+ HN GK GA T R P ++ V F N A+ EW ++H
Sbjct: 17 YCGYTTDLEKRLATHNSGK---GAKYTKTRLPVKLLASV-NFDNKNDAMSCEWWFKHK 70
>gi|420155626|ref|ZP_14662484.1| GIY-YIG catalytic domain protein [Clostridium sp. MSTE9]
gi|394758855|gb|EJF41691.1| GIY-YIG catalytic domain protein [Clostridium sp. MSTE9]
Length = 98
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQH 77
G Y GYT DP RR HN GK GA T +R P D+V + AL+ E A +
Sbjct: 19 GTLYSGYTTDPCRRTALHNSGK---GAKYTRSRRPVDLVFVESHLTKS-EALQHEAALK- 73
Query: 78 PKMSR 82
K+SR
Sbjct: 74 -KLSR 77
>gi|323490975|ref|ZP_08096169.1| GIY-YIG catalytic domain-containing protein [Planococcus
donghaensis MPA1U2]
gi|323395331|gb|EGA88183.1| GIY-YIG catalytic domain-containing protein [Planococcus
donghaensis MPA1U2]
Length = 89
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 4 HGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFP 63
H Y+L + Y Y GYT D ++R+ HN GK GA T RGP ++ F
Sbjct: 6 HYFYVLECADRSY----YAGYTNDLEKRLAAHNAGK---GAKYTRARGPSKLIYHE-CFE 57
Query: 64 NDISALRFEWAWQHPKMSRRLQHVARKKS 92
A++ E+A++ ++++++A +K
Sbjct: 58 TKQEAMKAEYAFKQLTKPQKIRYIAEEKE 86
>gi|332522958|ref|ZP_08399210.1| GIY-YIG catalytic domain protein [Streptococcus porcinus str.
Jelinkova 176]
gi|332314222|gb|EGJ27207.1| GIY-YIG catalytic domain protein [Streptococcus porcinus str.
Jelinkova 176]
Length = 86
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHPK 79
Y GYT D DRRIK HN+GK GA T +R P + L F + A+ E ++ K
Sbjct: 12 YTGYTTDIDRRIKTHNEGK---GAKYTRSRLPVKL-LYTESFESKQEAMSAEALFKKRK 66
>gi|345020787|ref|ZP_08784400.1| hypothetical protein OTW25_05600 [Ornithinibacillus scapharcae
TW25]
Length = 96
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
Query: 4 HGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFP 63
H VY+L + Y GYT D + R++ H GK GA T RGP+ V+ + FP
Sbjct: 5 HTVYILKCGDDSL----YTGYTNDLENRLEMHESGK---GAKYTRGRGPF-QVMYIEKFP 56
Query: 64 NDISALRFEWAWQHPKMSRRLQHVARKKSKE 94
+AL+ E+ + + Q + R K KE
Sbjct: 57 TKEAALKREYEIKQLTRKGKFQLI-RDKLKE 86
>gi|342218978|ref|ZP_08711575.1| GIY-YIG catalytic domain protein [Megasphaera sp. UPII 135-E]
gi|341588377|gb|EGS31776.1| GIY-YIG catalytic domain protein [Megasphaera sp. UPII 135-E]
Length = 81
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQH 77
Y G+TVD ++R+K HN+G+ GA T R P ++ V FP A+++EW +H
Sbjct: 15 YTGWTVDIEKRLKAHNEGR---GAKYTRARRP-VVIAWVQSFPTKQLAMQWEWKIKH 67
>gi|359765474|ref|ZP_09269299.1| hypothetical protein GOPIP_025_00220 [Gordonia polyisoprenivorans
NBRC 16320]
gi|359317054|dbj|GAB22132.1| hypothetical protein GOPIP_025_00220 [Gordonia polyisoprenivorans
NBRC 16320]
Length = 106
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
VY+L + Y Y+G TVD DRR+ +HN+GK GA TS R P V+ FP
Sbjct: 5 VYILECSDGSY----YVGSTVDLDRRVNEHNEGK---GAAYTSRRRPV-RVVFSREFPTV 56
Query: 66 ISALRFEWAWQ 76
A R E Q
Sbjct: 57 EEAYRLEKRIQ 67
>gi|172056073|ref|YP_001812533.1| excinuclease ABC subunit C [Exiguobacterium sibiricum 255-15]
gi|171988594|gb|ACB59516.1| Excinuclease ABC C subunit domain protein [Exiguobacterium
sibiricum 255-15]
Length = 92
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 12/79 (15%)
Query: 1 MVFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
M H VY++ R+ G Y GY +D ++R+ HN G+ GA T R P V++ Y
Sbjct: 1 MSEHAVYIVRCRD----GSLYTGYAIDVEKRLATHNAGQ---GARYTRARLP---VVLEY 50
Query: 61 --GFPNDISALRFEWAWQH 77
FP AL+ E+A +
Sbjct: 51 TETFPTKSEALKREYAIKQ 69
>gi|373107006|ref|ZP_09521306.1| hypothetical protein HMPREF9623_00970 [Stomatobaculum longum]
gi|371651945|gb|EHO17371.1| hypothetical protein HMPREF9623_00970 [Stomatobaculum longum]
Length = 103
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
VYLL + Y Y GYTVD +RR+ H GK GA T RG +V + PN
Sbjct: 15 VYLLLCGDGTY----YCGYTVDMERRLAAHRAGK---GAKYTRGRGLLTLVYLER-LPNK 66
Query: 66 ISALRFEWAWQHPKMSRR 83
+AL E A + SR+
Sbjct: 67 RAALCREAALKRLPRSRK 84
>gi|259511441|sp|C1GJU5.1|SLX1_PARBD RecName: Full=Structure-specific endonuclease subunit SLX1
gi|226287198|gb|EEH42711.1| GIY-YIG catalytic domain-containing protein [Paracoccidioides
brasiliensis Pb18]
Length = 417
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 26/148 (17%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKT--SNRGPWDMV---- 56
F+ YLL R+ YIG T DP RR+ QHN ++ G A +T N PW+MV
Sbjct: 24 FYCCYLL--RSCVRHASLYIGSTPDPARRLAQHNGDRN-GAAKRTLRENLRPWEMVAIHC 80
Query: 57 LIVYGFPN--------------DISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLR 102
LIV + D + ++ P+ + ++ A+ + T+ T L
Sbjct: 81 LIVRSLLDGHGKNTKVSRHADLDGNVIQELGVRICPRTGKGVKGTAKPR---TSLTNILA 137
Query: 103 LLHIMLQTAPWQRLPLTVQWLKPEYQQV 130
LH++L++ + + P+ V++ + +V
Sbjct: 138 NLHLLLRSPYFSKWPVEVRFFSADVHRV 165
>gi|171778646|ref|ZP_02919742.1| hypothetical protein STRINF_00594 [Streptococcus infantarius
subsp. infantarius ATCC BAA-102]
gi|171282603|gb|EDT48027.1| GIY-YIG catalytic domain protein [Streptococcus infantarius
subsp. infantarius ATCC BAA-102]
Length = 91
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY--GFPNDISALRFEWAW 75
G Y GYT D +RRIK HN GK GA T +R P V ++Y F + +A+ E +
Sbjct: 21 GTLYTGYTTDVERRIKTHNAGK---GAKYTKSRLP---VKLIYQESFDSKEAAMSAESYF 74
Query: 76 QHPKMSRRLQHVARKKS 92
+ ++L ++ K+
Sbjct: 75 KQKTRQQKLDYINEHKA 91
>gi|423068174|ref|ZP_17056962.1| hypothetical protein HMPREF9682_00183 [Streptococcus intermedius
F0395]
gi|355367065|gb|EHG14778.1| hypothetical protein HMPREF9682_00183 [Streptococcus intermedius
F0395]
Length = 85
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY--GFPNDISALRFEWAW 75
G Y GYT D +R+ HN GK GA T R P V ++Y FP+ SA+ E +
Sbjct: 15 GSLYTGYTTDIKKRLHIHNAGK---GAKYTRARLP---VTLLYQEEFPDKPSAMSAEALF 68
Query: 76 QHPKMSRRLQHVARKK 91
+ ++L+++A KK
Sbjct: 69 KRKTRQQKLEYIADKK 84
>gi|414563589|ref|YP_006042550.1| conserved hypothetical protein [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
gi|338846654|gb|AEJ24866.1| conserved hypothetical protein [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
Length = 86
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKM 80
Y GYT D D+R+K HN GK GA T R P + L F + +A+R E ++
Sbjct: 12 YTGYTTDLDKRLKAHNAGK---GAKYTRCRLPVSL-LYYESFDSKQAAMRAEALFKKRNT 67
Query: 81 -SRRLQHVARKKSKET 95
++L ++A ++SK+
Sbjct: 68 RQQKLTYIAEQQSKKA 83
>gi|15673803|ref|NP_267978.1| hypothetical protein L1889726 [Lactococcus lactis subsp. lactis
Il1403]
gi|281492434|ref|YP_003354414.1| GIY-YIG nuclease superfamily protein [Lactococcus lactis subsp.
lactis KF147]
gi|23397001|sp|Q9CEL6.1|YSIG_LACLA RecName: Full=UPF0213 protein YsiG
gi|12724849|gb|AAK05919.1|AE006412_6 conserved hypothetical protein [Lactococcus lactis subsp. lactis
Il1403]
gi|281376098|gb|ADA65589.1| GIY-YIG nuclease superfamily protein [Lactococcus lactis subsp.
lactis KF147]
gi|374673930|dbj|BAL51821.1| putative endonuclease [Lactococcus lactis subsp. lactis IO-1]
Length = 104
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHP 78
Y GYT D ++R+ HN GK GA T R P ++ V F N A+ EW ++H
Sbjct: 17 YCGYTTDLEKRLATHNSGK---GAKYTKTRLPVKLLASV-DFDNKNDAMSCEWWFKHK 70
>gi|332140887|ref|YP_004426625.1| URI domain endonuclease [Alteromonas macleodii str. 'Deep
ecotype']
gi|327550909|gb|AEA97627.1| hypothetical URI domain endonuclease [Alteromonas macleodii str.
'Deep ecotype']
Length = 118
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
+YL+ ++ LG+ Y G T +P RRI QH +G+ GGA + P + V+ N
Sbjct: 26 LYLIENK----LGQLYTGITTEPKRRIAQH-RGELKGGAKALKGKSPL-VFRAVFEVANK 79
Query: 66 ISALRFEWAWQHPKMSR 82
A + E+A + KMSR
Sbjct: 80 SEASKLEYAVK--KMSR 94
>gi|398309121|ref|ZP_10512595.1| GIY-YIG nuclease superfamily protein [Bacillus mojavensis RO-H-1]
Length = 99
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKM 80
Y GYT D +R+K HN GK GA T R P D++ F A++ E+ ++ K+
Sbjct: 19 YAGYTNDLQKRLKTHNDGK---GAKYTKARRPVDLIF-AEAFATKREAMQAEYYFK--KL 72
Query: 81 SRRLQHV---ARKKSKETTY 97
+RR + + ++ SKE Y
Sbjct: 73 TRRKKELYIEEKRNSKEAVY 92
>gi|311977682|ref|YP_003986802.1| uncharacterized endo/excinuclease amino terminal domain protein
[Acanthamoeba polyphaga mimivirus]
gi|82000019|sp|Q5UPY6.1|YL300_MIMIV RecName: Full=Uncharacterized protein L300
gi|55416922|gb|AAV50572.1| endo/excinuclease amino terminal domain protein [Acanthamoeba
polyphaga mimivirus]
gi|308204325|gb|ADO18126.1| uncharacterized endo/excinuclease amino terminal domain protein
[Acanthamoeba polyphaga mimivirus]
gi|339061236|gb|AEJ34540.1| endo/excinuclease amino terminal domain protein [Acanthamoeba
polyphaga mimivirus]
gi|351737453|gb|AEQ60488.1| GIY-YIG nuclease superfamily protein [Acanthamoeba castellanii
mamavirus]
gi|398257143|gb|EJN40751.1| endo/excinuclease amino terminal domain protein [Acanthamoeba
polyphaga lentillevirus]
Length = 166
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNK-GKDFGGAHKTSNRGPWDMVLIVYGFPN 64
YL+ S + + TYIG T + RR+ HN GA +T R W +L + GF N
Sbjct: 6 CYLIMSLDSK---ETYIGSTNNRQRRLNDHNNLNPSRKGAKRTRGR-TWIPILYISGFEN 61
Query: 65 DISALRFEWAWQHPKMSRRLQHV 87
+ L FE W+ R +Q +
Sbjct: 62 KNACLSFESGWKRLSKKRNIQRL 84
>gi|18310426|ref|NP_562360.1| GIY-YIG domain-containing protein [Clostridium perfringens str.
13]
gi|23396963|sp|Q8XKF6.1|Y1444_CLOPE RecName: Full=UPF0213 protein CPE1444
gi|18145106|dbj|BAB81150.1| conserved hypothetical protein [Clostridium perfringens str. 13]
Length = 93
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
VY+L ++ Y G+T + ++RIK HN G GA T RGP +V + F N
Sbjct: 4 VYILKCKDES----LYTGWTNNLEKRIKAHNNG---CGAKYTRGRGPVKLVYFEF-FENK 55
Query: 66 ISALRFEWAWQHPKMSRRLQHVARKKSKETTY 97
A E+ + +++LQ ++ K KE Y
Sbjct: 56 REAQSREYYIKKLTRNQKLQLISSKSIKEENY 87
>gi|389845688|ref|YP_006347927.1| nuclease [Haloferax mediterranei ATCC 33500]
gi|448616690|ref|ZP_21665400.1| putative nuclease [Haloferax mediterranei ATCC 33500]
gi|388242994|gb|AFK17940.1| putative nuclease [Haloferax mediterranei ATCC 33500]
gi|445751345|gb|EMA02782.1| putative nuclease [Haloferax mediterranei ATCC 33500]
Length = 87
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
H VY+L + G Y GYT D +RR+ +H+ G+ GA T R P ++V V +
Sbjct: 1 MHFVYVLQCSD----GSLYTGYTTDVERRVAEHDAGE---GAKYTRGRTPVELVH-VEEY 52
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARK 90
+ +A+ E+ + K ++L V K
Sbjct: 53 DSKSAAMSREYEIKQLKRKQKLALVESK 80
>gi|310827784|ref|YP_003960141.1| hypothetical protein [Eubacterium limosum KIST612]
gi|308739518|gb|ADO37178.1| hypothetical protein ELI_2195 [Eubacterium limosum KIST612]
Length = 93
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 1 MVFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
M H VY+L ++ Y G+T D ++R+K HN GK GA T +R P ++V
Sbjct: 12 MDKHYVYILKCKDSSL----YTGWTTDIEKRLKAHNSGK---GAKYTKSRKPVELVY-KE 63
Query: 61 GFPNDISALRFEWAWQ 76
F N ALR E A +
Sbjct: 64 EFDNKSDALRREAAIK 79
>gi|379704902|ref|YP_005203361.1| putative endonuclease containing a URI domain protein
[Streptococcus infantarius subsp. infantarius CJ18]
gi|374681601|gb|AEZ61890.1| putative endonuclease containing a URI domain protein
[Streptococcus infantarius subsp. infantarius CJ18]
Length = 79
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY--GFPNDISALRFEWAW 75
G Y GYT D +RRIK HN GK GA T +R P V ++Y F + +A+ E +
Sbjct: 9 GTLYTGYTTDVERRIKTHNAGK---GAKYTKSRLP---VKLIYQESFNSKEAAMSAESYF 62
Query: 76 QHPKMSRRLQHVARKKS 92
+ ++L ++ K+
Sbjct: 63 KQKTRQQKLDYINEHKA 79
>gi|410862454|ref|YP_006977688.1| URI domain endonuclease [Alteromonas macleodii AltDE1]
gi|410819716|gb|AFV86333.1| URI domain endonuclease [Alteromonas macleodii AltDE1]
Length = 115
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
+YL+ ++ LG+ Y G T +P RRI QH +G+ GGA + P + V+ N
Sbjct: 23 LYLIENK----LGQLYTGITTEPKRRIAQH-RGELKGGAKALKGKSPL-VFRAVFEVANK 76
Query: 66 ISALRFEWAWQHPKMSR 82
A + E+A + KMSR
Sbjct: 77 SEASKLEYAVK--KMSR 91
>gi|322385788|ref|ZP_08059432.1| endo/exonuclease amino terminal GIY-YIG domain protein
[Streptococcus cristatus ATCC 51100]
gi|417922835|ref|ZP_12566321.1| GIY-YIG catalytic domain protein [Streptococcus cristatus ATCC
51100]
gi|321270526|gb|EFX53442.1| endo/exonuclease amino terminal GIY-YIG domain protein
[Streptococcus cristatus ATCC 51100]
gi|342831983|gb|EGU66286.1| GIY-YIG catalytic domain protein [Streptococcus cristatus ATCC
51100]
Length = 87
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY--GFPNDISALRFEWAW 75
G Y GYT D + R+K H GK GA T R P V ++Y P+ +A+ E +
Sbjct: 15 GTLYTGYTTDVEARLKTHQAGK---GAKYTRARLP---VTLIYQEEHPDKSAAMSAESLF 68
Query: 76 QHPKMSRRLQHVARKKSK 93
+ K + +L ++ K+SK
Sbjct: 69 KKKKRAEKLAYIEEKRSK 86
>gi|347525317|ref|YP_004832065.1| endonuclease, GIY-YIG type [Lactobacillus ruminis ATCC 27782]
gi|345284276|gb|AEN78129.1| Endonuclease, GIY-YIG type [Lactobacillus ruminis ATCC 27782]
Length = 92
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 8/69 (11%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY--GFPNDISALRFEWAWQHP 78
Y G+T D R +HN GK GA T NR P V ++Y F + SAL+ E+A++H
Sbjct: 18 YGGFTTDLKVRTAKHNSGK---GAKYTRNRRP---VKLIYHEEFSDKSSALKAEYAFKHQ 71
Query: 79 KMSRRLQHV 87
++++ ++
Sbjct: 72 SRAKKVAYL 80
>gi|419800502|ref|ZP_14325778.1| GIY-YIG catalytic domain protein, partial [Streptococcus
parasanguinis F0449]
gi|385694754|gb|EIG25338.1| GIY-YIG catalytic domain protein, partial [Streptococcus
parasanguinis F0449]
Length = 95
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQH 77
G Y GYT D ++R+K HN GK GA T R P + L +P+ SA+ E ++
Sbjct: 27 GSLYTGYTTDVEKRLKTHNAGK---GAKYTRARLPVKL-LYQEAYPDKPSAMSAEALFKK 82
Query: 78 PKMSRRLQHVARK 90
+L ++ ++
Sbjct: 83 KSRQAKLNYIKKR 95
>gi|357054634|ref|ZP_09115716.1| hypothetical protein HMPREF9467_02688 [Clostridium
clostridioforme 2_1_49FAA]
gi|355384234|gb|EHG31303.1| hypothetical protein HMPREF9467_02688 [Clostridium
clostridioforme 2_1_49FAA]
Length = 104
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 44/77 (57%), Gaps = 9/77 (11%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY-GFPNDISALRFEWAWQ 76
G Y G+T D D+R+K HN+GK GA T R P +VL Y F A+R E+A +
Sbjct: 12 GTYYCGWTNDLDKRLKAHNQGK---GAKYTRPRRP--VVLSYYEAFETKQEAMRREYAIK 66
Query: 77 HPKMSR-RLQHVARKKS 92
H MSR + +H+ R+ S
Sbjct: 67 H--MSRTQKEHLIRETS 81
>gi|149924936|ref|ZP_01913266.1| Excinuclease ABC, C subunit-like protein [Plesiocystis pacifica
SIR-1]
gi|149814204|gb|EDM73817.1| Excinuclease ABC, C subunit-like protein [Plesiocystis pacifica
SIR-1]
Length = 95
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 5/48 (10%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPW 53
+YLL S + GR+Y+G TVD +RR+ QHN G+ GGA T PW
Sbjct: 22 LYLLRSAS----GRSYVGITVDLERRLAQHN-GELPGGAKSTRGGRPW 64
>gi|448732335|ref|ZP_21714616.1| Excinuclease ABC C subunit domain protein [Halococcus salifodinae
DSM 8989]
gi|445804908|gb|EMA55138.1| Excinuclease ABC C subunit domain protein [Halococcus salifodinae
DSM 8989]
Length = 80
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 10/79 (12%)
Query: 4 HGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFP 63
H VY++ + G Y GYT D DRR+++HN G+ GA T R P ++ V F
Sbjct: 3 HHVYVIECSD----GSLYTGYTTDVDRRVREHNAGE---GAKYTRGRTPVEL-RYVETFA 54
Query: 64 NDISALRFEWAWQHPKMSR 82
+ +AL E A + ++SR
Sbjct: 55 DKGAALSREHAIK--RLSR 71
>gi|456012121|gb|EMF45838.1| putative endonuclease [Planococcus halocryophilus Or1]
Length = 89
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 4 HGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFP 63
H Y+L + Y Y GYT D ++R+ HN GK GA T +GP ++ F
Sbjct: 6 HYFYVLECADQSY----YAGYTNDLEKRLTAHNAGK---GAKYTRAKGPSKLIYHE-CFE 57
Query: 64 NDISALRFEWAWQHPKMSRRLQHVARKKS 92
A++ E+A++ ++++++A +K
Sbjct: 58 TKQKAMKAEYAFKQLTKPQKIRYIAEEKE 86
>gi|88797186|ref|ZP_01112776.1| Excinuclease ABC, C subunit-like protein [Reinekea blandensis
MED297]
gi|88780055|gb|EAR11240.1| Excinuclease ABC, C subunit-like protein [Reinekea sp. MED297]
Length = 94
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 7/73 (9%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYG-FPNDISALRFEWAWQ 76
G Y G T DP RR++QHN G+ GGA T++R P + L+ Y P+ A R E+ +
Sbjct: 19 GTFYTGITTDPHRRLRQHN-GELVGGARYTASRRP--VTLVFYEPHPSRSDAARAEYRLR 75
Query: 77 HPKMSRRLQHVAR 89
K+SR+ Q +AR
Sbjct: 76 --KLSRK-QKLAR 85
>gi|91977932|ref|YP_570591.1| excinuclease ABC subunit C [Rhodopseudomonas palustris BisB5]
gi|91684388|gb|ABE40690.1| Excinuclease ABC, C subunit-like [Rhodopseudomonas palustris
BisB5]
Length = 94
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 6 VYLLYSRNP-RYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPN 64
VY+L P RYL TY+G+T+D DRR+ QHN GA S RG +++ F
Sbjct: 12 VYVLGCAGPGRYL--TYVGWTLDLDRRLTQHN-----AGAGARSTRGRTWVLIHSERFTR 64
Query: 65 DISALRFEWAWQHPKMSRR 83
A+ EW + + RR
Sbjct: 65 RQDAMSREWHLKRDRAFRR 83
>gi|255526887|ref|ZP_05393783.1| Excinuclease ABC C subunit domain protein [Clostridium
carboxidivorans P7]
gi|255509393|gb|EET85737.1| Excinuclease ABC C subunit domain protein [Clostridium
carboxidivorans P7]
Length = 77
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYG--FPNDISALRFEWAW 75
G Y GYT D ++RI+ HN GK GA T R P V +VY F AL+ E+A
Sbjct: 12 GTLYTGYTNDLNKRIQVHNSGK---GAKYTRGRLP---VKLVYSEEFNTKNEALKREYAI 65
Query: 76 QHPKMSRRLQHV 87
+ K R+L+ +
Sbjct: 66 KLMKRKRKLELI 77
>gi|299536741|ref|ZP_07050051.1| hypothetical protein BFZC1_12002 [Lysinibacillus fusiformis ZC1]
gi|424740000|ref|ZP_18168412.1| hypothetical protein C518_4234 [Lysinibacillus fusiformis ZB2]
gi|298727855|gb|EFI68420.1| hypothetical protein BFZC1_12002 [Lysinibacillus fusiformis ZC1]
gi|422946372|gb|EKU40783.1| hypothetical protein C518_4234 [Lysinibacillus fusiformis ZB2]
Length = 87
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 8/74 (10%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYG--FPNDISALRFEWAWQHP 78
Y GYT + ++R+ HN GK GA T RGP V +Y F A+R E+A++
Sbjct: 20 YAGYTNNIEKRVAVHNAGK---GAKYTRARGP---VKCIYKEIFETKQEAMRAEYAFKQL 73
Query: 79 KMSRRLQHVARKKS 92
++++ ++ R +S
Sbjct: 74 TRTQKINYIRRGES 87
>gi|257053324|ref|YP_003131157.1| excinuclease ABC subunit C [Halorhabdus utahensis DSM 12940]
gi|256692087|gb|ACV12424.1| Excinuclease ABC C subunit domain protein [Halorhabdus utahensis
DSM 12940]
Length = 91
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 4 HGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFP 63
H VY+L+ + Y GYT DP RR+++HN G+ GA T R P ++V + F
Sbjct: 8 HYVYVLWCADDTL----YTGYTTDPARRVREHNDGE---GAKYTRGRTPVELVHL-ETFE 59
Query: 64 NDISALRFEWAWQHPKMSRRLQHV 87
+A+ E+A + + Q V
Sbjct: 60 TKSAAMSREYAIKQLSRGEKEQLV 83
>gi|385831303|ref|YP_005869116.1| GIY-YIG nuclease superfamily protein [Lactococcus lactis subsp.
lactis CV56]
gi|418037603|ref|ZP_12675978.1| hypothetical protein LLCRE1631_00785 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|326407311|gb|ADZ64382.1| GIY-YIG nuclease superfamily protein [Lactococcus lactis subsp.
lactis CV56]
gi|354694371|gb|EHE94037.1| hypothetical protein LLCRE1631_00785 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
Length = 104
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKM 80
Y GYT D ++R+ HN GK GA T R P ++ V F N A+ EW ++H K+
Sbjct: 17 YCGYTTDLEKRLATHNSGK---GAKYTKTRLPVKLLASV-DFDNINDAMSCEWWFKH-KL 71
Query: 81 SRR 83
R+
Sbjct: 72 VRK 74
>gi|418963296|ref|ZP_13515135.1| GIY-YIG catalytic domain protein [Streptococcus anginosus subsp.
whileyi CCUG 39159]
gi|383343411|gb|EID21595.1| GIY-YIG catalytic domain protein [Streptococcus anginosus subsp.
whileyi CCUG 39159]
Length = 99
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQH 77
G Y GYT D +R+ HN GK GA T R P + L FP+ SA+ E ++
Sbjct: 27 GSLYTGYTTDVKKRLHTHNTGK---GAKYTRTRLPVTL-LYQEEFPDKPSAMSAEALFKR 82
Query: 78 PKMSRRLQHVARKKSK 93
++L+++ K K
Sbjct: 83 KTRQQKLEYINEHKKK 98
>gi|110799012|ref|YP_696135.1| GIY-YIG domain-containing protein [Clostridium perfringens ATCC
13124]
gi|422346109|ref|ZP_16427023.1| UPF0213 protein [Clostridium perfringens WAL-14572]
gi|110673659|gb|ABG82646.1| GIY-YIG domain protein [Clostridium perfringens ATCC 13124]
gi|373226731|gb|EHP49053.1| UPF0213 protein [Clostridium perfringens WAL-14572]
Length = 97
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 1 MVFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
+ + VY+L ++ Y G+T + ++RIK HN G GA T RGP +V
Sbjct: 3 ITLNYVYILKCKDES----LYTGWTNNLEKRIKAHNNG---CGAKYTRGRGPVKLVYFE- 54
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQHVARKKSKETTY 97
F N A E+ + +++LQ ++ K KE Y
Sbjct: 55 SFENKREAQSREYYIKKLTRNQKLQLISSKSIKEENY 91
>gi|126652965|ref|ZP_01725107.1| hypothetical protein BB14905_03936 [Bacillus sp. B14905]
gi|126590295|gb|EAZ84417.1| hypothetical protein BB14905_03936 [Bacillus sp. B14905]
Length = 87
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 8/74 (10%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYG--FPNDISALRFEWAWQHP 78
Y GYT + ++R+ HN GK GA T RGP V +Y F A+R E+A++
Sbjct: 20 YAGYTNNLEKRVAVHNAGK---GAKYTRARGP---VKCIYKEEFETKEEAMRAEYAFKQL 73
Query: 79 KMSRRLQHVARKKS 92
++++ ++ R +S
Sbjct: 74 TRTQKIMYIRRGES 87
>gi|448376163|ref|ZP_21559447.1| excinuclease ABC subunit C [Halovivax asiaticus JCM 14624]
gi|445658181|gb|ELZ11004.1| excinuclease ABC subunit C [Halovivax asiaticus JCM 14624]
Length = 82
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 1 MVFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
M H VY+L+ + G Y GYT D +RR+ +HN G+ GA T +R P ++V V
Sbjct: 1 MSRHVVYVLHCAD----GTLYTGYTTDLERRVDEHNAGE---GAKYTRSRTPVEVVH-VE 52
Query: 61 GFPNDISALRFEW 73
F + +A+ E+
Sbjct: 53 RFDSRSAAMSREY 65
>gi|414161775|ref|ZP_11418027.1| UPF0213 protein [Staphylococcus simulans ACS-120-V-Sch1]
gi|410875286|gb|EKS23209.1| UPF0213 protein [Staphylococcus simulans ACS-120-V-Sch1]
Length = 85
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 12/92 (13%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY- 60
+ H +Y++ ++ G Y GYT + RI++HN GK GA T R P V++VY
Sbjct: 3 IEHYIYIVRCKD----GTLYTGYTNNVQARIEKHNAGK---GAKYTKTRRP---VVLVYQ 52
Query: 61 -GFPNDISALRFEWAWQHPKMSRRLQHVARKK 91
G+ A++ E+ + +++LQ + R K
Sbjct: 53 EGYETKSEAMKREYEIKTFTRTQKLQLIERGK 84
>gi|86749024|ref|YP_485520.1| excinuclease ABC subunit C [Rhodopseudomonas palustris HaA2]
gi|86572052|gb|ABD06609.1| Excinuclease ABC, C subunit-like [Rhodopseudomonas palustris
HaA2]
Length = 93
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 6 VYLLYSRNP-RYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPN 64
VY+L P RYL TY+G+T+D DRR+ QHN G GA T R W +++ F +
Sbjct: 11 VYVLGCAGPNRYL--TYVGWTLDLDRRLSQHNAGT---GARSTRGR-RW-VLIHSERFTS 63
Query: 65 DISALRFEWAWQHPKMSRR 83
A+ EW + + RR
Sbjct: 64 RREAMSREWHLKRDRAFRR 82
>gi|402297575|ref|ZP_10817341.1| hypothetical protein BalcAV_01926 [Bacillus alcalophilus ATCC
27647]
gi|401727181|gb|EJT00375.1| hypothetical protein BalcAV_01926 [Bacillus alcalophilus ATCC
27647]
Length = 93
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 1 MVFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
M H VY+L + G Y GYT ++R+K+H +GK GA T RGP+ V+ V
Sbjct: 1 MTSHVVYVLECAD----GSWYTGYTNHFEKRLKRHEEGK---GAKYTRGRGPFK-VIHVT 52
Query: 61 GFPNDISALRFEWAWQ 76
+ AL+ E+A++
Sbjct: 53 EYETKSEALKAEYAFK 68
>gi|315639733|ref|ZP_07894872.1| endo/exonuclease amino terminal GIY-YIG domain protein
[Enterococcus italicus DSM 15952]
gi|315484510|gb|EFU74967.1| endo/exonuclease amino terminal GIY-YIG domain protein
[Enterococcus italicus DSM 15952]
Length = 90
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 10/81 (12%)
Query: 4 HGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAH-KTSNRGPWDMVLIVYGF 62
H Y+L ++ Y G GYT DPDRR+K+HN G G + + +R P M+ F
Sbjct: 5 HYFYVLLCKDGSYYG----GYTTDPDRRLKEHNDG--IGAKYTRLQSRRPLTMIHTE-CF 57
Query: 63 PNDISALRFEWAWQHPKMSRR 83
A + E A++ K++R+
Sbjct: 58 ATRSEATKAEAAFK--KLARK 76
>gi|456351683|dbj|BAM86128.1| conserved hypothetical protein [Agromonas oligotrophica S58]
Length = 83
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 7 YLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDI 66
Y+ R+ + + Y+G T D +R+K HN G+ AH TS PW +V FP+ +
Sbjct: 3 YVYIIRSVAFPDQEYVGATADIGQRLKDHNAGRS---AH-TSKFMPWTLVWYC-AFPDKL 57
Query: 67 SALRFE 72
AL FE
Sbjct: 58 RALAFE 63
>gi|302390845|ref|YP_003826665.1| excinuclease ABC C subunit domain-containing protein
[Acetohalobium arabaticum DSM 5501]
gi|302202922|gb|ADL11600.1| Excinuclease ABC C subunit domain protein [Acetohalobium
arabaticum DSM 5501]
Length = 82
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMV 56
Y GYT D DRR+K+HN+G+ GA T R P ++V
Sbjct: 16 YTGYTTDLDRRVKEHNQGQ---GAKYTRGRKPVELV 48
>gi|445381684|ref|ZP_21427118.1| hypothetical protein IQ5_07234 [Streptococcus thermophilus MTCC
5460]
gi|445394587|ref|ZP_21428853.1| hypothetical protein IQ7_07307 [Streptococcus thermophilus MTCC
5461]
gi|444748874|gb|ELW73822.1| hypothetical protein IQ7_07307 [Streptococcus thermophilus MTCC
5461]
gi|444748977|gb|ELW73919.1| hypothetical protein IQ5_07234 [Streptococcus thermophilus MTCC
5460]
Length = 89
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQH 77
G Y GYT D +RR+K HN GK GA T R P + L F + A+ E ++
Sbjct: 18 GTLYTGYTTDVERRLKTHNAGK---GAKYTRARLPVKL-LYSEAFASKPEAMSAEALFKK 73
Query: 78 PKMSRRLQHV 87
++L ++
Sbjct: 74 KSREKKLAYI 83
>gi|322516255|ref|ZP_08069186.1| endo/exonuclease amino terminal GIY-YIG domain protein
[Streptococcus vestibularis ATCC 49124]
gi|322125255|gb|EFX96625.1| endo/exonuclease amino terminal GIY-YIG domain protein
[Streptococcus vestibularis ATCC 49124]
Length = 89
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY--GFPNDISALRFEWAW 75
G Y GYT D +RR+K HN GK GA T R P V ++Y F + A+ E +
Sbjct: 18 GTLYTGYTTDVERRLKTHNSGK---GAKYTRARLP---VKLIYSEAFDSKSEAMSAEALF 71
Query: 76 QHPKMSRRLQHV 87
+ ++L ++
Sbjct: 72 KKKSREKKLAYI 83
>gi|312867150|ref|ZP_07727360.1| GIY-YIG catalytic domain protein [Streptococcus parasanguinis
F0405]
gi|311097279|gb|EFQ55513.1| GIY-YIG catalytic domain protein [Streptococcus parasanguinis
F0405]
Length = 87
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQH 77
G Y GYT D ++R+K HN GK GA T R P + L +P+ SA+ E ++
Sbjct: 15 GSLYTGYTTDVEKRLKTHNAGK---GAKYTRARLPVKL-LYQESYPDKPSAMSAEALFKK 70
Query: 78 PKMSRRLQHVARKK 91
+L ++ + +
Sbjct: 71 KSRQAKLNYIKKNR 84
>gi|387879217|ref|YP_006309520.1| hypothetical protein Spaf_0700 [Streptococcus parasanguinis
FW213]
gi|386792671|gb|AFJ25706.1| hypothetical protein Spaf_0700 [Streptococcus parasanguinis
FW213]
Length = 93
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQH 77
G Y GYT D ++R+K HN GK GA T R P + L +P+ SA+ E ++
Sbjct: 19 GSLYTGYTTDVEKRLKTHNAGK---GAKYTRARLPVKL-LYQEAYPDKPSAMSAEALFKK 74
Query: 78 PKMSRRLQHVARKK 91
+L ++ +++
Sbjct: 75 KSRQAKLNYIKKRE 88
>gi|417917434|ref|ZP_12560993.1| GIY-YIG catalytic domain protein [Streptococcus parasanguinis
SK236]
gi|342830071|gb|EGU64410.1| GIY-YIG catalytic domain protein [Streptococcus parasanguinis
SK236]
Length = 91
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQH 77
G Y GYT D ++R+K HN GK GA T R P + L +P+ SA+ E ++
Sbjct: 19 GSLYTGYTTDVEKRLKTHNAGK---GAKYTRARLPVKL-LYQESYPDKPSAMSAEALFKK 74
Query: 78 PKMSRRLQHVARKK 91
+L ++ + +
Sbjct: 75 KSRQAKLNYIKKNR 88
>gi|323141267|ref|ZP_08076163.1| GIY-YIG catalytic domain protein [Phascolarctobacterium
succinatutens YIT 12067]
gi|322414224|gb|EFY05047.1| GIY-YIG catalytic domain protein [Phascolarctobacterium
succinatutens YIT 12067]
Length = 87
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
VY+L ++ G Y G+T D + R+ HN G+ GA T RGP ++V P+
Sbjct: 5 VYMLRCKD----GSLYTGWTNDLEHRLAMHNSGR---GAKYTRGRGPLELV-YSEELPDK 56
Query: 66 ISALRFEWAWQHPKMSRRL 84
+ALR E A + + ++L
Sbjct: 57 EAALRRECAIKKLRREQKL 75
>gi|323340836|ref|ZP_08081088.1| endo/exonuclease amino terminal GIY-YIG domain protein
[Lactobacillus ruminis ATCC 25644]
gi|417974169|ref|ZP_12614991.1| endonuclease [Lactobacillus ruminis ATCC 25644]
gi|323091959|gb|EFZ34579.1| endo/exonuclease amino terminal GIY-YIG domain protein
[Lactobacillus ruminis ATCC 25644]
gi|346329394|gb|EGX97691.1| endonuclease [Lactobacillus ruminis ATCC 25644]
Length = 92
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY--GFPNDISALRFEWAWQHP 78
Y G+T D R +HN G+ GA T NR P V ++Y F + SAL+ E+A++H
Sbjct: 18 YGGFTTDLKVRTAKHNSGE---GAKYTRNRRP---VKLIYHEEFSDKSSALKAEYAFKHQ 71
Query: 79 KMSRRLQHVARKKSKETTY 97
++++ ++ KE +
Sbjct: 72 SRAKKVAYLVNHGIKEELF 90
>gi|337281656|ref|YP_004621127.1| endo/exonuclease amino terminal GIY-YIG domain-containing protein
[Streptococcus parasanguinis ATCC 15912]
gi|335369249|gb|AEH55199.1| endo/exonuclease amino terminal GIY-YIG domain protein
[Streptococcus parasanguinis ATCC 15912]
Length = 89
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQH 77
G Y GYT D ++R+K HN GK GA T R P + L +P+ SA+ E ++
Sbjct: 15 GSLYTGYTTDVEKRLKTHNAGK---GAKYTRARLPVKL-LYQEAYPDKPSAMSAEALFKK 70
Query: 78 PKMSRRLQHVARKK 91
+L ++ +++
Sbjct: 71 KSRQAKLNYIKKRE 84
>gi|153816420|ref|ZP_01969088.1| hypothetical protein RUMTOR_02673 [Ruminococcus torques ATCC
27756]
gi|317502453|ref|ZP_07960616.1| GIY-YIG domain-containing protein [Lachnospiraceae bacterium
8_1_57FAA]
gi|331089279|ref|ZP_08338181.1| hypothetical protein HMPREF1025_01764 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336439439|ref|ZP_08619052.1| hypothetical protein HMPREF0990_01446 [Lachnospiraceae bacterium
1_1_57FAA]
gi|145846255|gb|EDK23173.1| GIY-YIG catalytic domain protein [Ruminococcus torques ATCC
27756]
gi|316896138|gb|EFV18246.1| GIY-YIG domain-containing protein [Lachnospiraceae bacterium
8_1_57FAA]
gi|330405831|gb|EGG85360.1| hypothetical protein HMPREF1025_01764 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336016116|gb|EGN45911.1| hypothetical protein HMPREF0990_01446 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 82
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYG--FPNDISALRFEWAW 75
G Y G+T + ++RIK HN G+ GA T R P V++VY FP A++ EW
Sbjct: 12 GSLYTGWTNNLEKRIKDHNAGR---GAKYTKARRP---VVLVYKEEFPTKQEAMKREWEI 65
Query: 76 QHPKMSRRLQHVARKKS 92
+ +L + KS
Sbjct: 66 KRLSRKEKLSMIENSKS 82
>gi|414157196|ref|ZP_11413496.1| hypothetical protein HMPREF9186_01916 [Streptococcus sp. F0442]
gi|410868512|gb|EKS16477.1| hypothetical protein HMPREF9186_01916 [Streptococcus sp. F0442]
Length = 87
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY--GFPNDISALRFEWAW 75
G Y GYT D ++R+K HN GK GA T R P V ++Y +P+ SA+ E +
Sbjct: 15 GSLYTGYTTDIEKRLKTHNAGK---GAKYTRARLP---VTLLYQESYPDKPSAMSAEALF 68
Query: 76 QHPKMSRRLQHVARKK 91
+ +L ++ + +
Sbjct: 69 KKKSRQAKLNYIKKNR 84
>gi|374571758|ref|ZP_09644854.1| putative endonuclease containing a URI domain [Bradyrhizobium sp.
WSM471]
gi|374420079|gb|EHQ99611.1| putative endonuclease containing a URI domain [Bradyrhizobium sp.
WSM471]
Length = 80
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
VY+L R+ + + Y+G T D RRI +HN GK + T+ PW ++ FP+
Sbjct: 4 VYIL--RSIEFPEQEYVGATEDLKRRIPEHNAGK----STHTAKFKPWKLIWYC-AFPDK 56
Query: 66 ISALRFE 72
AL FE
Sbjct: 57 YKALAFE 63
>gi|226325570|ref|ZP_03801088.1| hypothetical protein COPCOM_03375 [Coprococcus comes ATCC 27758]
gi|225206053|gb|EEG88407.1| GIY-YIG catalytic domain protein [Coprococcus comes ATCC 27758]
Length = 87
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKM 80
Y G+T D ++R++ HN GK GA T +R P ++V + F A+R E+A +H M
Sbjct: 15 YTGWTNDIEKRLEAHNAGK---GAKYTRSRRPVELVYLE-QFETKEEAMRREYAIKH--M 68
Query: 81 SRRLQ 85
+RR +
Sbjct: 69 TRRAK 73
>gi|448407989|ref|ZP_21574184.1| excinuclease ABC subunit C [Halosimplex carlsbadense 2-9-1]
gi|445675239|gb|ELZ27774.1| excinuclease ABC subunit C [Halosimplex carlsbadense 2-9-1]
Length = 107
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 4 HGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFP 63
H VYLL + + Y GYT D RR+++H++G GA T R P ++ L V GF
Sbjct: 11 HFVYLLRCADDTF----YTGYTTDVARRVREHDEG---AGAKYTRGRTPVEL-LHVEGFD 62
Query: 64 NDISALRFEWAWQHPKMSRRLQHVARKKSKET 95
+ +A+ E+ + + + + VA E+
Sbjct: 63 SKSAAMSREYEIKDGSRAAKERLVAEGGVPES 94
>gi|322373477|ref|ZP_08048013.1| GIY-YIG domain protein [Streptococcus sp. C150]
gi|321278519|gb|EFX55588.1| GIY-YIG domain protein [Streptococcus sp. C150]
Length = 89
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQH 77
G Y GYT D +RR+K HN GK GA T R P + L F + A+ E ++
Sbjct: 18 GTLYTGYTTDVERRLKTHNSGK---GAKYTRARLPVKL-LYSEAFASKPEAMSAEALFKK 73
Query: 78 PKMSRRLQHV 87
++L ++
Sbjct: 74 KSREKKLAYI 83
>gi|168206349|ref|ZP_02632354.1| GIY-YIG domain protein [Clostridium perfringens E str. JGS1987]
gi|168210035|ref|ZP_02635660.1| GIY-YIG domain protein [Clostridium perfringens B str. ATCC 3626]
gi|169347246|ref|ZP_02866185.1| GIY-YIG domain protein [Clostridium perfringens C str. JGS1495]
gi|182626953|ref|ZP_02954685.1| GIY-YIG domain protein [Clostridium perfringens D str. JGS1721]
gi|422874366|ref|ZP_16920851.1| GIY-YIG domain-containing protein [Clostridium perfringens F262]
gi|169296642|gb|EDS78773.1| GIY-YIG domain protein [Clostridium perfringens C str. JGS1495]
gi|170662171|gb|EDT14854.1| GIY-YIG domain protein [Clostridium perfringens E str. JGS1987]
gi|170711857|gb|EDT24039.1| GIY-YIG domain protein [Clostridium perfringens B str. ATCC 3626]
gi|177907689|gb|EDT70307.1| GIY-YIG domain protein [Clostridium perfringens D str. JGS1721]
gi|380304674|gb|EIA16961.1| GIY-YIG domain-containing protein [Clostridium perfringens F262]
Length = 93
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKM 80
Y G+T + ++RIK HN G GA T RGP +V F N A E+ +
Sbjct: 15 YTGWTNNLEKRIKAHNNG---CGAKYTRGRGPVKLVYFE-SFENKREAQSREYYIKKLTR 70
Query: 81 SRRLQHVARKKSKETTY 97
+++LQ ++ K KE Y
Sbjct: 71 NQKLQLISSKSIKEENY 87
>gi|257064795|ref|YP_003144467.1| endonuclease containing a URI domain [Slackia heliotrinireducens
DSM 20476]
gi|256792448|gb|ACV23118.1| predicted endonuclease containing a URI domain [Slackia
heliotrinireducens DSM 20476]
Length = 100
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQ 76
G Y GY VD ++R+ HN GK GA T +R P ++V FP AL E+ ++
Sbjct: 16 GTLYAGYAVDVEQRVATHNAGK---GAKYTRSRLPVELVAAAE-FPTKHEALSAEYRFK 70
>gi|55821543|ref|YP_139985.1| hypothetical protein stu1567 [Streptococcus thermophilus LMG
18311]
gi|55823471|ref|YP_141912.1| hypothetical protein str1567 [Streptococcus thermophilus
CNRZ1066]
gi|116628254|ref|YP_820873.1| endonuclease [Streptococcus thermophilus LMD-9]
gi|386087168|ref|YP_006003042.1| endonuclease containing a URI domain [Streptococcus thermophilus
ND03]
gi|387910269|ref|YP_006340575.1| hypothetical protein Y1U_C1461 [Streptococcus thermophilus
MN-ZLW-002]
gi|55737528|gb|AAV61170.1| conserved hypothetical protein [Streptococcus thermophilus LMG
18311]
gi|55739456|gb|AAV63097.1| conserved hypothetical protein [Streptococcus thermophilus
CNRZ1066]
gi|116101531|gb|ABJ66677.1| Predicted endonuclease containing a URI domain [Streptococcus
thermophilus LMD-9]
gi|312278881|gb|ADQ63538.1| Predicted endonuclease containing a URI domain [Streptococcus
thermophilus ND03]
gi|387575204|gb|AFJ83910.1| hypothetical protein Y1U_C1461 [Streptococcus thermophilus
MN-ZLW-002]
Length = 89
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQH 77
G Y GYT D +RR+K HN GK GA T R P + L F + A+ E ++
Sbjct: 18 GTLYTGYTTDVERRLKTHNAGK---GAKYTRARLPVKL-LYSEAFASKPEAMSAEALFKK 73
Query: 78 PKMSRRLQHV 87
++L ++
Sbjct: 74 KSREKKLAYI 83
>gi|331266026|ref|YP_004325656.1| hypothetical protein SOR_0653 [Streptococcus oralis Uo5]
gi|326682698|emb|CBZ00315.1| conserved hypothetical protein [Streptococcus oralis Uo5]
Length = 94
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
+Y+L R+ Y Y GYT D RR+ HN GK GA T R P ++ V GF +
Sbjct: 7 MYVLECRDGSY----YTGYTTDVRRRLAVHNSGK---GAKYTRARLPVKLIY-VEGFSSK 58
Query: 66 ISALRFEWAWQHPKMSRRLQHVARKKSK 93
A+ E + K S++ + ++ + K
Sbjct: 59 EEAMSAEALLKRKKRSQKERFLSENQEK 86
>gi|297582377|ref|YP_003698157.1| excinuclease ABC C subunit domain-containing protein [Bacillus
selenitireducens MLS10]
gi|297140834|gb|ADH97591.1| Excinuclease ABC C subunit domain protein [Bacillus
selenitireducens MLS10]
Length = 93
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMV-LIVY 60
V H VY+L ++ Y GYT DP RR+ H GK GA T RGP+ + L Y
Sbjct: 4 VNHYVYMLRCKDNTL----YTGYTTDPKRRLSMHETGK---GARYTKGRGPFVLEHLECY 56
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQHVARKKSKET 95
G + A+ E A + ++RR + K K T
Sbjct: 57 GTKGE--AMSREHAIK--ALTRRQKEALIKAGKMT 87
>gi|385267061|ref|ZP_10045148.1| GIY-YIG nuclease superfamily protein [Bacillus sp. 5B6]
gi|385151557|gb|EIF15494.1| GIY-YIG nuclease superfamily protein [Bacillus sp. 5B6]
Length = 99
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYG--FPNDISALRFEWAWQHP 78
Y GYT D +R+K HN+GK GA T R P VL+ + F A++ E+ ++
Sbjct: 19 YAGYTNDLQKRLKTHNEGK---GAKYTRARRP---VLLCHAESFETKREAMQAEYRFKQL 72
Query: 79 KMSRRLQHVARK-KSKETTYT 98
++ Q++ K +SKE Y
Sbjct: 73 TRKKKEQYIEEKRRSKEAVYA 93
>gi|386345259|ref|YP_006041423.1| hypothetical protein STH8232_1804 [Streptococcus thermophilus JIM
8232]
gi|339278720|emb|CCC20468.1| hypothetical protein STH8232_1804 [Streptococcus thermophilus JIM
8232]
Length = 89
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQH 77
G Y GYT D +RR+K HN GK GA T R P + L F + A+ E ++
Sbjct: 18 GTLYTGYTTDVERRLKTHNAGK---GAKYTRARLPVKL-LYSEAFASKPEAMSAEALFKK 73
Query: 78 PKMSRRLQHV 87
++L ++
Sbjct: 74 KSREKKLAYI 83
>gi|195977784|ref|YP_002123028.1| endonuclease containing a URI domain [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|225870079|ref|YP_002746026.1| hypothetical protein SEQ_0674 [Streptococcus equi subsp. equi
4047]
gi|195974489|gb|ACG62015.1| endonuclease containing a URI domain [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|225699483|emb|CAW93015.1| conserved hypothetical protein [Streptococcus equi subsp. equi
4047]
Length = 93
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKM 80
Y GYT D D+R+K HN GK GA T R P + L F + +A+R E ++
Sbjct: 19 YTGYTTDLDKRLKAHNAGK---GAKYTRCRLPVSL-LYYESFDSKQAAMRAEALFKKRNT 74
Query: 81 -SRRLQHVARKKSKE 94
++L ++A +++K+
Sbjct: 75 RQQKLTYIAEQQNKK 89
>gi|345006153|ref|YP_004809006.1| excinuclease ABC C subunit domain-containing protein [halophilic
archaeon DL31]
gi|344321779|gb|AEN06633.1| Excinuclease ABC C subunit domain protein [halophilic archaeon
DL31]
Length = 106
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 10/80 (12%)
Query: 4 HGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFP 63
H VY+L + G Y GYT D +RR+ +HN G+ GA T R P + V V F
Sbjct: 29 HYVYVLACAD----GSLYTGYTTDVERRVAEHNAGE---GAKYTRGRTPVEPVH-VETFE 80
Query: 64 NDISALRFEWAWQHPKMSRR 83
+ +A+ E+ + ++SRR
Sbjct: 81 SQSAAMSREYEIK--QLSRR 98
>gi|322389140|ref|ZP_08062702.1| endo/exonuclease amino terminal GIY-YIG domain protein
[Streptococcus parasanguinis ATCC 903]
gi|321144150|gb|EFX39566.1| endo/exonuclease amino terminal GIY-YIG domain protein
[Streptococcus parasanguinis ATCC 903]
Length = 87
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQH 77
G Y GYT D ++R+K HN GK GA T R P + L +P+ SA+ E ++
Sbjct: 15 GSLYTGYTTDIEKRLKTHNAGK---GAKYTRARLPVKL-LYKESYPDKPSAMSAEALFKK 70
Query: 78 PKMSRRLQHVAR 89
+L ++ +
Sbjct: 71 KSRQAKLNYIKK 82
>gi|386586644|ref|YP_006083046.1| endonuclease [Streptococcus suis D12]
gi|353738790|gb|AER19798.1| endonuclease [Streptococcus suis D12]
Length = 89
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQH 77
G Y GYT D ++R+ HN+GK GA T R P + L F + A+ E ++
Sbjct: 15 GSLYTGYTTDVEKRLATHNRGK---GAKYTRGRLPVSL-LYQEAFASKQEAMSAEALFKK 70
Query: 78 PKMSRRLQHVARKK 91
+L ++A +K
Sbjct: 71 RSRQSKLDYIAERK 84
>gi|347751688|ref|YP_004859253.1| excinuclease ABC C subunit domain-containing protein [Bacillus
coagulans 36D1]
gi|347584206|gb|AEP00473.1| Excinuclease ABC C subunit domain protein [Bacillus coagulans
36D1]
Length = 97
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQH 77
G Y GYTVD RR ++H++G+ GA T R P + L + A++ E+A++
Sbjct: 17 GSFYGGYTVDLKRRFREHSEGR---GAKYTRTRTPVKL-LYFQEYATKSEAMKAEYAFK- 71
Query: 78 PKMSRR 83
K+SRR
Sbjct: 72 -KLSRR 76
>gi|344209049|ref|YP_004794190.1| excinuclease ABC subunit C [Stenotrophomonas maltophilia JV3]
gi|343780411|gb|AEM52964.1| Excinuclease ABC C subunit domain protein [Stenotrophomonas
maltophilia JV3]
Length = 91
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
+YLL R+ G Y G + D D R H GK GA T R P VL V +P+
Sbjct: 10 LYLLECRD----GSYYAGISTDVDARFAAHQAGK---GARYTRARPPL-RVLAVREYPDR 61
Query: 66 ISALRFEWAWQHPKMSRRL 84
+A R EW + R+L
Sbjct: 62 AAASRAEWQLKQQPRERKL 80
>gi|392530932|ref|ZP_10278069.1| GIY-YIG nuclease superfamily protein [Carnobacterium
maltaromaticum ATCC 35586]
Length = 119
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAH-KTSNRGPWDMVLIVYGFPNDISALRFEWAWQ 76
G Y GYT D RR K+HN G G + K S R P M+ GF + +A + E+A++
Sbjct: 16 GSFYGGYTTDLSRREKEHNDG--IGAKYTKPSYRRPLKMIY-AEGFSSRSAATKAEYAFK 72
Query: 77 HPKMSRRLQHV 87
++++Q +
Sbjct: 73 KQSRAKKVQFL 83
>gi|317046755|ref|YP_004114403.1| excinuclease ABC subunit C domain-containing protein [Pantoea sp.
At-9b]
gi|316948372|gb|ADU67847.1| Excinuclease ABC C subunit domain protein [Pantoea sp. At-9b]
Length = 95
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND-ISALRFEWAWQ 76
G Y G T D +RR++QH +G+ GA +GP + L+ + D +A R E+ +
Sbjct: 15 GMLYTGITTDVNRRLQQHQQGR---GARSLRGKGP--LTLVFHCDAGDRAAASRLEYQVK 69
Query: 77 HPKMSRRLQHVARK 90
+++LQ VA++
Sbjct: 70 QLSRAQKLQLVAQQ 83
>gi|366088607|ref|ZP_09455080.1| hypothetical protein LaciK1_00545 [Lactobacillus acidipiscis KCTC
13900]
Length = 95
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQH 77
G Y G+T D RR++QHN G+ GA T R P M+ F + AL+ E+A++H
Sbjct: 17 GTLYGGFTTDLKRRLEQHNSGR---GAKYTRVRRPVKMIYHE-EFDSKSLALKAEYAFKH 72
Query: 78 PKMSRR 83
S++
Sbjct: 73 QPRSKK 78
>gi|255574060|ref|XP_002527946.1| nuclease, putative [Ricinus communis]
gi|223532650|gb|EEF34435.1| nuclease, putative [Ricinus communis]
Length = 150
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 32 IKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKMSRRL 84
+KQHN G+ GGA + PW IV+GF + A +FE W+ +SR+L
Sbjct: 52 LKQHN-GELKGGAKASCAGRPWICACIVHGFNDQSEACKFESKWK--SVSRKL 101
>gi|375111009|ref|ZP_09757222.1| excinuclease ABC subunit C [Alishewanella jeotgali KCTC 22429]
gi|374568906|gb|EHR40076.1| excinuclease ABC subunit C [Alishewanella jeotgali KCTC 22429]
Length = 91
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQH 77
G+ Y G + DP RR++QH +G+ GGA +GP +V +P SA + E+ +
Sbjct: 14 GQLYTGISTDPVRRLRQH-RGELAGGAKSLRGKGPLTLV-YQQPYPCRASASKAEYQVKQ 71
Query: 78 PKMSRRLQHVAR 89
+ + Q ++R
Sbjct: 72 LSKAAKEQLISR 83
>gi|288554641|ref|YP_003426576.1| hypothetical protein BpOF4_08130 [Bacillus pseudofirmus OF4]
gi|288545801|gb|ADC49684.1| hypothetical protein BpOF4_08130 [Bacillus pseudofirmus OF4]
Length = 89
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKM 80
Y GYT D RR+ H+ GK GA T RGP+ + V F AL+ E+A + K+
Sbjct: 16 YTGYTTDVGRRLDMHSSGK---GAKYTKGRGPFTLKY-VQEFETKKEALQAEYAIK--KL 69
Query: 81 SRR 83
SR+
Sbjct: 70 SRK 72
>gi|401884110|gb|EJT48283.1| cAMP dependent protein kinase catalytic subunit [Trichosporon
asahii var. asahii CBS 2479]
Length = 714
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 9/71 (12%)
Query: 71 FEWAWQHPKMSRRL-----QHVAR----KKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQ 121
FEWAWQHP++SR L + +R K SK + +L++ P++ LPL V+
Sbjct: 539 FEWAWQHPELSRHLRVGAGESASRPLFPKDSKRNQVERKTIVALALLRSHPFRSLPLHVR 598
Query: 122 WLKPEYQQVLT 132
+ + Q T
Sbjct: 599 CFRKDVHQSFT 609
>gi|366085838|ref|ZP_09452323.1| putative endonuclease [Lactobacillus zeae KCTC 3804]
Length = 94
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY--GFPNDISALRFEWAW 75
G Y G+T D + R+ HN GK GA T++R P V ++Y FP AL EW +
Sbjct: 16 GTFYGGFTDDVEARLATHNAGK---GAKYTASRRP---VRLLYQEAFPEKHEALSAEWHF 69
Query: 76 QHPKMSRRLQ 85
+H ++ Q
Sbjct: 70 KHQSRHKKEQ 79
>gi|335996678|ref|ZP_08562595.1| endonuclease [Lactobacillus ruminis SPM0211]
gi|335351748|gb|EGM53239.1| endonuclease [Lactobacillus ruminis SPM0211]
Length = 92
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 8/69 (11%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY--GFPNDISALRFEWAWQHP 78
Y G+T D R +HN G+ GA T NR P V ++Y F + SAL+ E+A++H
Sbjct: 18 YGGFTTDLKVRTAKHNSGE---GAKYTRNRRP---VKLIYHEEFSDKSSALKAEYAFKHQ 71
Query: 79 KMSRRLQHV 87
++++ ++
Sbjct: 72 SRAKKVAYL 80
>gi|254521786|ref|ZP_05133841.1| conserved hypothetical protein [Stenotrophomonas sp. SKA14]
gi|219719377|gb|EED37902.1| conserved hypothetical protein [Stenotrophomonas sp. SKA14]
Length = 87
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
+YLL R+ G Y G + D D R H GK GA T R P VL V +P+
Sbjct: 10 LYLLECRD----GSYYAGISTDVDARFAAHQAGK---GARYTRARPPL-RVLAVREYPDR 61
Query: 66 ISALRFEWAWQHPKMSRRL 84
+A R EW + R+L
Sbjct: 62 AAASRAEWQLKQQPRERKL 80
>gi|190576030|ref|YP_001973875.1| GIY-YIG nuclease superfamily protein [Stenotrophomonas
maltophilia K279a]
gi|190013952|emb|CAQ47592.1| conserved hypothetical protein [Stenotrophomonas maltophilia
K279a]
Length = 91
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
+YLL R+ G Y G + D D R H GK GA T R P VL V +P+
Sbjct: 10 LYLLECRD----GSYYAGISTDVDARFAAHQAGK---GARYTRARPPL-RVLAVREYPDR 61
Query: 66 ISALRFEWAWQHPKMSRRL 84
+A R EW + R+L
Sbjct: 62 AAASRAEWQLKQQPRERKL 80
>gi|194367380|ref|YP_002029990.1| GIY-YIG nuclease superfamily protein [Stenotrophomonas
maltophilia R551-3]
gi|194350184|gb|ACF53307.1| Excinuclease ABC C subunit domain protein [Stenotrophomonas
maltophilia R551-3]
Length = 88
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
+YLL R+ G Y G + D D R H GK GA T R P VL V +P+
Sbjct: 10 LYLLECRD----GSYYAGISTDVDARFAAHQAGK---GARYTRARPPL-RVLAVREYPDR 61
Query: 66 ISALRFEWAWQHPKMSRRL 84
+A R EW + R+L
Sbjct: 62 AAASRAEWQLKQQPRERKL 80
>gi|440783055|ref|ZP_20960866.1| putative O-methyltransferase [Clostridium pasteurianum DSM 525]
gi|440219630|gb|ELP58841.1| putative O-methyltransferase [Clostridium pasteurianum DSM 525]
Length = 91
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY--GFPNDISALRFEWAW 75
G Y GYT D R+K HN GK GA T R P V IVY F A + E+
Sbjct: 12 GTLYTGYTNDLKNRLKVHNSGK---GAKYTRGRLP---VAIVYFEAFETKSEATKREYYI 65
Query: 76 QHPKMSRRLQHVARKKSK 93
+H + +L+ + + K+K
Sbjct: 66 KHLNRTEKLKLIDKGKNK 83
>gi|417941071|ref|ZP_12584358.1| GIY-YIG catalytic domain protein [Streptococcus oralis SK313]
gi|343388364|gb|EGV00950.1| GIY-YIG catalytic domain protein [Streptococcus oralis SK313]
Length = 107
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQH 77
G Y GYT D RR+ HN GK GA T R P ++ V GF + A+ E +
Sbjct: 28 GSYYTGYTTDVKRRLATHNSGK---GAKYTRARLPVKLIY-VEGFASKEEAMSAEALLKR 83
Query: 78 PKMSRRLQHVARKKSK 93
K ++ Q ++ + K
Sbjct: 84 KKRPQKEQFLSENQEK 99
>gi|376261466|ref|YP_005148186.1| putative endonuclease containing a URI domain [Clostridium sp.
BNL1100]
gi|373945460|gb|AEY66381.1| putative endonuclease containing a URI domain [Clostridium sp.
BNL1100]
Length = 82
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKM 80
Y GYT D +RIK HN+GK GA T R P V +VY + ++ + KM
Sbjct: 15 YTGYTDDLQKRIKVHNRGK---GAKYTRARLP---VTLVYYEEAETKSIALSREYSIKKM 68
Query: 81 SRR 83
+RR
Sbjct: 69 TRR 71
>gi|397169677|ref|ZP_10493109.1| excinuclease ABC subunit C [Alishewanella aestuarii B11]
gi|396088981|gb|EJI86559.1| excinuclease ABC subunit C [Alishewanella aestuarii B11]
Length = 91
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQH 77
G+ Y G + DP RR++QH +G+ GGA +GP +V +P SA + E+ +
Sbjct: 14 GQLYTGISTDPVRRLRQH-RGELAGGAKSLRGKGPLTLV-YQQPYPCRASASKAEYQVKQ 71
Query: 78 PKMSRRLQHVAR 89
+ + Q ++R
Sbjct: 72 LSKAAKEQLISR 83
>gi|320546386|ref|ZP_08040701.1| endo/exonuclease amino terminal GIY-YIG domain protein
[Streptococcus equinus ATCC 9812]
gi|320448771|gb|EFW89499.1| endo/exonuclease amino terminal GIY-YIG domain protein
[Streptococcus equinus ATCC 9812]
Length = 91
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY--GFPNDISALRFEWAW 75
G Y GYT D + RIK HN GK GA T R P V ++Y F + +A+ E +
Sbjct: 21 GTLYTGYTTDVEHRIKTHNSGK---GAKYTRARRP---VKLIYQESFESKEAAMSAESYF 74
Query: 76 QHPKMSRRLQHV 87
+ ++L+++
Sbjct: 75 KQKTRKQKLEYI 86
>gi|260223198|emb|CBA33520.1| hypothetical protein Csp_B19470 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 311
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 15/73 (20%)
Query: 5 GVYLLYSR-NPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFP 63
GVY L + L R YIG + + R+ QHN+GKDF W+ ++V
Sbjct: 74 GVYFLMGELSEAGLPRAYIGQSGNVGNRLVQHNQGKDF-----------WNRAMVVISLT 122
Query: 64 NDIS---ALRFEW 73
N ++ AL EW
Sbjct: 123 NSMTQTHALFLEW 135
>gi|414085361|ref|YP_006994072.1| hypothetical protein BN424_3336 [Carnobacterium maltaromaticum
LMA28]
gi|412998948|emb|CCO12757.1| UPF0213 EF_2693 domain protein [Carnobacterium maltaromaticum
LMA28]
Length = 119
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAH-KTSNRGPWDMVLIVYGFPNDISALRFEWAWQ 76
G Y GYT D RR K+HN G G + K S R P M+ GF + +A + E+A++
Sbjct: 16 GSFYGGYTTDLSRREKEHNDG--IGAKYTKPSYRRPLKMIY-AEGFSSRSAATKAEYAFK 72
Query: 77 HPKMSRRLQHV 87
++++Q +
Sbjct: 73 KQTRAKKVQFL 83
>gi|393198774|ref|YP_006460616.1| endonuclease [Solibacillus silvestris StLB046]
gi|327438105|dbj|BAK14470.1| predicted endonuclease containing a URI domain [Solibacillus
silvestris StLB046]
Length = 92
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY--GFPNDISALRFEWAWQHP 78
Y GYT + ++RI HN GK GA T RGP V +Y F A+ E+A++
Sbjct: 20 YAGYTNNLEKRIAAHNAGK---GAKYTRARGP---VTCIYFETFETKQQAMSAEYAFKQL 73
Query: 79 KMSRRLQHV 87
K ++++++
Sbjct: 74 KRPQKIKYI 82
>gi|406667842|ref|ZP_11075594.1| hypothetical protein B857_03433 [Bacillus isronensis B3W22]
gi|405384357|gb|EKB43804.1| hypothetical protein B857_03433 [Bacillus isronensis B3W22]
Length = 92
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY--GFPNDISALRFEWAWQHP 78
Y GYT + ++RI HN GK GA T RGP V +Y F A+ E+A++
Sbjct: 20 YAGYTNNLEKRIATHNAGK---GAKYTRARGP---VTCIYFETFETKQQAMSAEYAFKQL 73
Query: 79 KMSRRLQHV 87
K ++++++
Sbjct: 74 KRPQKIKYI 82
>gi|424670342|ref|ZP_18107367.1| UPF0213 protein [Stenotrophomonas maltophilia Ab55555]
gi|401070800|gb|EJP79314.1| UPF0213 protein [Stenotrophomonas maltophilia Ab55555]
Length = 91
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
+YLL R+ G Y G + D D R H GK GA T R P VL V +P+
Sbjct: 10 LYLLECRD----GSYYAGISTDVDARFAAHQAGK---GARYTRARPPL-RVLAVREYPDR 61
Query: 66 ISALRFEWAWQHPKMSRRL 84
+A R EW + R+L
Sbjct: 62 AAASRAEWQLKQQPRERKL 80
>gi|397594174|gb|EJK56165.1| hypothetical protein THAOC_24000, partial [Thalassiosira oceanica]
Length = 2759
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
VYLL S R L TY+G T+ RR +HN G G S+R PW +V + G
Sbjct: 2635 VYLLAS--VRNLDTTYVGQTIHLKRRFSEHNSGNGSTGTCNASDR-PWALVGYICGL 2688
>gi|448304092|ref|ZP_21494037.1| Excinuclease ABC C subunit domain protein [Natronorubrum
sulfidifaciens JCM 14089]
gi|445592179|gb|ELY46371.1| Excinuclease ABC C subunit domain protein [Natronorubrum
sulfidifaciens JCM 14089]
Length = 82
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 7/55 (12%)
Query: 1 MVFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDM 55
M H VY+L + G Y GYT D +RR+++HN G GA T R P ++
Sbjct: 1 MSAHVVYVLECAD----GSLYTGYTTDLERRVREHNAGD---GAKYTRGRTPVEL 48
>gi|406991501|gb|EKE11002.1| hypothetical protein ACD_15C00160G0001 [uncultured bacterium]
Length = 86
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 7/53 (13%)
Query: 4 HGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMV 56
H VY+LYS+ L + Y+G T D RR+ +HN G + TS PW++
Sbjct: 2 HYVYILYSKK---LNKFYVGATSDLKRRVSEHN----IGASQFTSAGVPWELA 47
>gi|294943085|ref|XP_002783755.1| hypothetical protein Pmar_PMAR016236 [Perkinsus marinus ATCC
50983]
gi|239896437|gb|EER15551.1| hypothetical protein Pmar_PMAR016236 [Perkinsus marinus ATCC
50983]
Length = 125
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 8/53 (15%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTS--NRGPWDMV 56
VYLL S + +TYIG D D+R++QHN G GA TS +R PW ++
Sbjct: 11 VYLLMSSST---SQTYIGTCTDLDQRVRQHNSGH---GARYTSALSRRPWQVI 57
>gi|374337606|ref|YP_005094311.1| endonuclease [Streptococcus macedonicus ACA-DC 198]
gi|372283711|emb|CCF01908.1| COG2827: putative endonuclease containing a URI domain
[Streptococcus macedonicus ACA-DC 198]
Length = 90
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY--GFPNDISALRFEWAW 75
G Y GYT + ++RIK HN GK GA T +R P V ++Y F + +A+ E +
Sbjct: 21 GTLYTGYTTNVEKRIKTHNSGK---GAKYTRSRLP---VKLIYQESFDSKEAAMSAETYF 74
Query: 76 QHPKMSRRLQHV 87
+ ++L+++
Sbjct: 75 KQKTRQQKLEYI 86
>gi|390349175|ref|XP_783475.2| PREDICTED: structure-specific endonuclease subunit slx1-like
isoform 3 [Strongylocentrotus purpuratus]
Length = 183
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 18/23 (78%)
Query: 107 MLQTAPWQRLPLTVQWLKPEYQQ 129
ML+ PW RLPLTVQWL EY+Q
Sbjct: 1 MLRVGPWCRLPLTVQWLMQEYKQ 23
>gi|146337273|ref|YP_001202321.1| excinuclease ABC subunit C [Bradyrhizobium sp. ORS 278]
gi|146190079|emb|CAL74071.1| hypothetical protein; putative Excinuclease ABC, C subunit,
N-terminal (fragment) [Bradyrhizobium sp. ORS 278]
Length = 83
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 7 YLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDI 66
Y+ R+ Y + YIG T D +R+K HN G+ AH TS PW +V FP+
Sbjct: 3 YVYIIRSVAYPEQEYIGATADIRQRLKDHNAGRS---AH-TSKFTPWTLVWYC-AFPDKH 57
Query: 67 SALRFE 72
A+ FE
Sbjct: 58 RAMAFE 63
>gi|333892184|ref|YP_004466059.1| putative URI domain endonuclease [Alteromonas sp. SN2]
gi|332992202|gb|AEF02257.1| putative URI domain endonuclease [Alteromonas sp. SN2]
Length = 126
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 17 LGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLI 58
LG+ Y G T P+RRI QH +G+ GGA +GP I
Sbjct: 32 LGQLYTGITTSPERRISQH-RGEIVGGARALKGKGPLQFRAI 72
>gi|367475878|ref|ZP_09475307.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
gi|365271838|emb|CCD87775.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
Length = 83
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 7 YLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDI 66
Y+ R+ + + YIG + D +R+K HN G+ AH TS PW +V FP+
Sbjct: 3 YVYIIRSLAFPEQEYIGASADIKQRLKDHNAGRS---AH-TSKFAPWTLVWYC-AFPDKQ 57
Query: 67 SALRFE 72
AL FE
Sbjct: 58 RALAFE 63
>gi|424879452|ref|ZP_18303084.1| putative endonuclease containing a URI domain [Rhizobium
leguminosarum bv. trifolii WU95]
gi|392515815|gb|EIW40547.1| putative endonuclease containing a URI domain [Rhizobium
leguminosarum bv. trifolii WU95]
Length = 99
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
VY+L R+ + + Y G T D +R HN GK AH T+ PW+++ FP+
Sbjct: 4 VYIL--RSVDFPDQEYTGSTADLKQRFAAHNAGK---SAH-TAKFAPWNLLWYC-AFPDK 56
Query: 66 ISALRFE 72
+ AL FE
Sbjct: 57 LKALEFE 63
>gi|313890776|ref|ZP_07824401.1| GIY-YIG catalytic domain protein [Streptococcus pseudoporcinus
SPIN 20026]
gi|416852031|ref|ZP_11909176.1| GIY-YIG catalytic domain protein [Streptococcus pseudoporcinus LQ
940-04]
gi|313120877|gb|EFR43991.1| GIY-YIG catalytic domain protein [Streptococcus pseudoporcinus
SPIN 20026]
gi|356739520|gb|EHI64752.1| GIY-YIG catalytic domain protein [Streptococcus pseudoporcinus LQ
940-04]
Length = 86
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHPK 79
Y GYT D DRR+K HN GK GA T +R P + L F + A+ E ++ K
Sbjct: 12 YTGYTTDIDRRLKTHNAGK---GAKYTRSRLPVKL-LYTETFSSKQEAMSAEALFKKRK 66
>gi|375360726|ref|YP_005128765.1| hypothetical protein BACAU_0036 [Bacillus amyloliquefaciens
subsp. plantarum CAU B946]
gi|421729469|ref|ZP_16168601.1| GIY-YIG nuclease superfamily protein [Bacillus amyloliquefaciens
subsp. plantarum M27]
gi|451348575|ref|YP_007447206.1| GIY-YIG nuclease superfamily protein [Bacillus amyloliquefaciens
IT-45]
gi|371566720|emb|CCF03570.1| UPF0213 protein [Bacillus amyloliquefaciens subsp. plantarum CAU
B946]
gi|407076713|gb|EKE49694.1| GIY-YIG nuclease superfamily protein [Bacillus amyloliquefaciens
subsp. plantarum M27]
gi|449852333|gb|AGF29325.1| GIY-YIG nuclease superfamily protein [Bacillus amyloliquefaciens
IT-45]
Length = 99
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKM 80
Y GYT D +R+K HN+GK GA T R P + F A++ E+ ++
Sbjct: 19 YAGYTNDLQKRLKTHNEGK---GAKYTRARRPVSLCH-AESFETKREAMQAEYRFKQLTR 74
Query: 81 SRRLQHVARK-KSKETTY 97
++ Q++ K +SKE Y
Sbjct: 75 KKKEQYIEEKRRSKEAVY 92
>gi|346309460|ref|ZP_08851549.1| hypothetical protein HMPREF9457_03258 [Dorea formicigenerans
4_6_53AFAA]
gi|345899235|gb|EGX69085.1| hypothetical protein HMPREF9457_03258 [Dorea formicigenerans
4_6_53AFAA]
Length = 86
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYG--FPNDISALRFEWAW 75
G Y G+T + ++RI+ HN GK GA T +R P V +VY F A+ E+A
Sbjct: 12 GSLYTGWTNNLEKRIQAHNAGK---GAKYTKSRLP---VKLVYSETFATKEEAMSREYAI 65
Query: 76 QHPKMSRRLQHV 87
+H K +LQ +
Sbjct: 66 KHMKRKEKLQLI 77
>gi|403069002|ref|ZP_10910334.1| hypothetical protein ONdio_05333 [Oceanobacillus sp. Ndiop]
Length = 83
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 4 HGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFP 63
H VY+L ++ Y GYT + + R+K H GK GA T RGP+ V+ V F
Sbjct: 5 HVVYMLRCKDDS----LYTGYTNNLEHRLKMHESGK---GAKYTRGRGPFK-VVFVERFS 56
Query: 64 NDISALRFEWAWQHPKMSRRLQ 85
+ +A++ E+ + ++Q
Sbjct: 57 SKEAAMQKEYQIKQLSRKEKMQ 78
>gi|306830919|ref|ZP_07464081.1| endo/exonuclease amino terminal GIY-YIG domain protein
[Streptococcus gallolyticus subsp. gallolyticus
TX20005]
gi|304426942|gb|EFM30052.1| endo/exonuclease amino terminal GIY-YIG domain protein
[Streptococcus gallolyticus subsp. gallolyticus
TX20005]
Length = 90
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY--GFPNDISALRFEWAW 75
G Y GYT + ++RIK HN GK GA T +R P V ++Y F + +A+ E +
Sbjct: 21 GTLYTGYTTNVEKRIKTHNSGK---GAKYTRSRLP---VKLIYQESFDSKEAAMSAESYF 74
Query: 76 QHPKMSRRLQHV 87
+ ++L+++
Sbjct: 75 KQKTRQQKLEYI 86
>gi|448307289|ref|ZP_21497188.1| Excinuclease ABC C subunit domain protein [Natronorubrum bangense
JCM 10635]
gi|445596015|gb|ELY50110.1| Excinuclease ABC C subunit domain protein [Natronorubrum bangense
JCM 10635]
Length = 82
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 7/55 (12%)
Query: 1 MVFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDM 55
M H VY+L + G Y GYT D +RR+ +HN G+ GA T R P ++
Sbjct: 1 MSDHAVYVLECAD----GSLYTGYTTDLERRVGEHNAGE---GAKYTRGRTPVEL 48
>gi|387896561|ref|YP_006326857.1| putative endonuclease [Bacillus amyloliquefaciens Y2]
gi|387170671|gb|AFJ60132.1| putative endonuclease [Bacillus amyloliquefaciens Y2]
Length = 90
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKM 80
Y GYT D +R+K HN+GK GA T R P + F A++ E+ ++
Sbjct: 10 YAGYTNDLQKRLKTHNEGK---GAKYTRARRPVSLCH-AESFETKREAMQAEYRFKQLTR 65
Query: 81 SRRLQHVARK-KSKETTY 97
++ Q++ K +SKE Y
Sbjct: 66 KKKEQYIEEKRRSKEAVY 83
>gi|365838835|ref|ZP_09380092.1| GIY-YIG catalytic domain protein [Anaeroglobus geminatus F0357]
gi|364566345|gb|EHM44037.1| GIY-YIG catalytic domain protein [Anaeroglobus geminatus F0357]
Length = 88
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEW 73
Y GYT D +RR+ HN G+ GA T +R P ++V FP+ +A+ +EW
Sbjct: 10 YTGYTADVERRLVMHNHGR---GAKYTRSRLPVELVW-SKAFPSKHAAMHWEW 58
>gi|154684554|ref|YP_001419715.1| GIY-YIG nuclease superfamily protein [Bacillus amyloliquefaciens
FZB42]
gi|384263666|ref|YP_005419373.1| GIY-YIG nuclease superfamily protein [Bacillus amyloliquefaciens
subsp. plantarum YAU B9601-Y2]
gi|394994169|ref|ZP_10386897.1| GIY-YIG nuclease superfamily protein [Bacillus sp. 916]
gi|167012943|sp|A7Z0F8.1|Y044_BACA2 RecName: Full=UPF0213 protein RBAM_000440
gi|154350405|gb|ABS72484.1| YazA [Bacillus amyloliquefaciens FZB42]
gi|380497019|emb|CCG48057.1| GIY-YIG nuclease superfamily protein [Bacillus amyloliquefaciens
subsp. plantarum YAU B9601-Y2]
gi|393804945|gb|EJD66336.1| GIY-YIG nuclease superfamily protein [Bacillus sp. 916]
Length = 99
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKM 80
Y GYT D +R+K HN+GK GA T R P + F A++ E+ ++
Sbjct: 19 YAGYTNDLQKRLKTHNEGK---GAKYTRARRPVSLCH-AESFETKREAMQAEYRFKQLTR 74
Query: 81 SRRLQHVARK-KSKETTY 97
++ Q++ K +SKE Y
Sbjct: 75 KKKEQYIEEKRRSKEAVY 92
>gi|429503568|ref|YP_007184752.1| GIY-YIG nuclease superfamily protein [Bacillus amyloliquefaciens
subsp. plantarum AS43.3]
gi|429485158|gb|AFZ89082.1| GIY-YIG nuclease superfamily protein [Bacillus amyloliquefaciens
subsp. plantarum AS43.3]
Length = 99
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKM 80
Y GYT D +R+K HN+GK GA T R P + F A++ E+ ++
Sbjct: 19 YAGYTNDLQKRLKTHNEGK---GAKYTRARMPVSLCH-AESFETKREAMQAEYRFKQLTR 74
Query: 81 SRRLQHVARK-KSKETTY 97
++ Q++ K +SKE Y
Sbjct: 75 KKKEQYIEEKRRSKEAVY 92
>gi|385262821|ref|ZP_10040920.1| GIY-YIG catalytic domain protein [Streptococcus sp. SK643]
gi|385189641|gb|EIF37102.1| GIY-YIG catalytic domain protein [Streptococcus sp. SK643]
Length = 95
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQH 77
G Y GYT D RRI HN GK GA T R P ++ GF + A+ E ++
Sbjct: 15 GSYYTGYTTDVKRRIAVHNSGK---GAKYTRARLPVKLIY-AEGFTSKAEAMSAEALFKQ 70
Query: 78 PKMSRRLQHVARKK 91
+ ++ KK
Sbjct: 71 KNRQSKESYIREKK 84
>gi|325977802|ref|YP_004287518.1| endo/exonuclease GIY-YIG domain-containing protein [Streptococcus
gallolyticus subsp. gallolyticus ATCC BAA-2069]
gi|386337312|ref|YP_006033481.1| putative endonuclease [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
gi|325177730|emb|CBZ47774.1| endo/exonuclease amino terminal GIY-YIG domain protein
[Streptococcus gallolyticus subsp. gallolyticus ATCC
BAA-2069]
gi|334279948|dbj|BAK27522.1| putative endonuclease [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
Length = 86
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY--GFPNDISALRFEWAW 75
G Y GYT + ++RIK HN GK GA T +R P V ++Y F + +A+ E +
Sbjct: 17 GTLYTGYTTNVEKRIKTHNSGK---GAKYTRSRLP---VKLIYQESFDSKEAAMSAESYF 70
Query: 76 QHPKMSRRLQHV 87
+ ++L+++
Sbjct: 71 KQKTRQQKLEYI 82
>gi|110803023|ref|YP_698750.1| GIY-YIG domain-containing protein [Clostridium perfringens SM101]
gi|110683524|gb|ABG86894.1| GIY-YIG domain protein [Clostridium perfringens SM101]
Length = 96
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 1 MVFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
+ + VY+L ++ Y G+T + ++RIK HN G GA T RGP +V
Sbjct: 2 ITLNYVYILKCKDES----LYTGWTNNLEKRIKAHNNG---CGAKYTRGRGPVKLVYFE- 53
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQHVARKKSKETTY 97
F N A E+ + +++LQ ++ K +E Y
Sbjct: 54 SFENKREAQSREYYIKKLTRNQKLQLISSKSIEEENY 90
>gi|308171926|ref|YP_003918631.1| UvrC-Intron-type (URI) endonuclease [Bacillus amyloliquefaciens
DSM 7]
gi|384157648|ref|YP_005539721.1| GIY-YIG nuclease superfamily protein [Bacillus amyloliquefaciens
TA208]
gi|384162441|ref|YP_005543820.1| UvrC-Intron-type (URI) endonuclease [Bacillus amyloliquefaciens
LL3]
gi|384166662|ref|YP_005548040.1| GIY-YIG nuclease superfamily protein [Bacillus amyloliquefaciens
XH7]
gi|307604790|emb|CBI41161.1| putative UvrC-Intron-type (URI) endonuclease [Bacillus
amyloliquefaciens DSM 7]
gi|328551736|gb|AEB22228.1| GIY-YIG nuclease superfamily protein [Bacillus amyloliquefaciens
TA208]
gi|328909996|gb|AEB61592.1| putative UvrC-Intron-type (URI) endonuclease [Bacillus
amyloliquefaciens LL3]
gi|341825941|gb|AEK87192.1| GIY-YIG nuclease superfamily protein [Bacillus amyloliquefaciens
XH7]
Length = 99
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKM 80
Y GYT D +R+K HN+GK GA T R P + F A++ E+ ++
Sbjct: 19 YAGYTNDLQKRLKTHNEGK---GAKYTRARRPVSLCH-AESFETKREAMQAEYRFKQLTR 74
Query: 81 SRRLQHVARKK-SKETTY 97
++ Q++ K+ SKE Y
Sbjct: 75 KKKEQYIEEKRSSKEAVY 92
>gi|288904867|ref|YP_003430089.1| hypothetical protein GALLO_0656 [Streptococcus gallolyticus
UCN34]
gi|288731593|emb|CBI13148.1| conserved hypothetical protein [Streptococcus gallolyticus UCN34]
Length = 94
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY--GFPNDISALRFEWAW 75
G Y GYT + ++RIK HN GK GA T +R P V ++Y F + +A+ E +
Sbjct: 25 GTLYTGYTTNVEKRIKTHNSGK---GAKYTRSRLP---VKLIYQESFDSKEAAMSAESYF 78
Query: 76 QHPKMSRRLQHV 87
+ ++L+++
Sbjct: 79 KQKTRQQKLEYI 90
>gi|22536942|ref|NP_687793.1| hypothetical protein SAG0778 [Streptococcus agalactiae 2603V/R]
gi|25010853|ref|NP_735248.1| hypothetical protein gbs0798 [Streptococcus agalactiae NEM316]
gi|76787029|ref|YP_329525.1| GIY-YIG domain-containing protein [Streptococcus agalactiae A909]
gi|76799330|ref|ZP_00781493.1| endo/excinuclease amino terminal domain protein [Streptococcus
agalactiae 18RS21]
gi|77406824|ref|ZP_00783856.1| Endo/excinuclease amino terminal domain, putative [Streptococcus
agalactiae H36B]
gi|77411362|ref|ZP_00787710.1| Endo/excinuclease amino terminal domain, putative [Streptococcus
agalactiae CJB111]
gi|77413605|ref|ZP_00789792.1| putative Endo/excinuclease amino terminal domain [Streptococcus
agalactiae 515]
gi|406709270|ref|YP_006763996.1| hypothetical protein A964_0780 [Streptococcus agalactiae
GD201008-001]
gi|410594337|ref|YP_006951064.1| excinuclease ABC subunit C [Streptococcus agalactiae SA20-06]
gi|421532551|ref|ZP_15978909.1| GIY-YIG domain-containing protein [Streptococcus agalactiae
STIR-CD-17]
gi|424049655|ref|ZP_17787206.1| GIY-YIG domain-containing protein [Streptococcus agalactiae
ZQ0910]
gi|54036587|sp|Q8E0F5.1|Y778_STRA5 RecName: Full=UPF0213 protein SAG0778
gi|54036588|sp|Q8E629.1|Y798_STRA3 RecName: Full=UPF0213 protein gbs0798
gi|123601995|sp|Q3K1S8.1|Y903_STRA1 RecName: Full=UPF0213 protein SAK_0903
gi|22533795|gb|AAM99665.1|AE014227_9 conserved hypothetical protein [Streptococcus agalactiae 2603V/R]
gi|23095232|emb|CAD46442.1| Unknown [Streptococcus agalactiae NEM316]
gi|76562086|gb|ABA44670.1| GIY-YIG domain protein [Streptococcus agalactiae A909]
gi|76585320|gb|EAO61915.1| endo/excinuclease amino terminal domain protein [Streptococcus
agalactiae 18RS21]
gi|77160371|gb|EAO71495.1| putative Endo/excinuclease amino terminal domain [Streptococcus
agalactiae 515]
gi|77162622|gb|EAO73585.1| Endo/excinuclease amino terminal domain, putative [Streptococcus
agalactiae CJB111]
gi|77174578|gb|EAO77415.1| Endo/excinuclease amino terminal domain, putative [Streptococcus
agalactiae H36B]
gi|389648928|gb|EIM70417.1| GIY-YIG domain-containing protein [Streptococcus agalactiae
ZQ0910]
gi|403642220|gb|EJZ03082.1| GIY-YIG domain-containing protein [Streptococcus agalactiae
STIR-CD-17]
gi|406650155|gb|AFS45556.1| hypothetical protein A964_0780 [Streptococcus agalactiae
GD201008-001]
gi|410517976|gb|AFV72120.1| Excinuclease ABC, C subunit [Streptococcus agalactiae SA20-06]
Length = 88
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQH 77
G Y GYT D RR+ HN GK GA T R P + L F + A+R E ++
Sbjct: 16 GTLYTGYTTDVKRRLNTHNTGK---GAKYTRARLPVKL-LYSEAFNSKQEAMRAEALFKQ 71
Query: 78 PKMSRRLQHVARKKSKE 94
+L ++ + K+++
Sbjct: 72 KTRQAKLTYIKQHKNEQ 88
>gi|421452971|ref|ZP_15902327.1| hypothetical protein with endo/excinuclease domain protein
[Streptococcus salivarius K12]
gi|400181280|gb|EJO15547.1| hypothetical protein with endo/excinuclease domain protein
[Streptococcus salivarius K12]
Length = 89
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYG--FPNDISALRFEWAW 75
G Y GYT D +RR+K HN GK GA T R P V ++Y F + A+ E +
Sbjct: 18 GTLYTGYTTDVERRLKTHNSGK---GAKYTRARLP---VKLLYSEVFASKPEAMSAEALF 71
Query: 76 QHPKMSRRLQHV 87
+ ++L ++
Sbjct: 72 KKKSREKKLAYI 83
>gi|77409643|ref|ZP_00786315.1| Endo/excinuclease amino terminal domain, putative [Streptococcus
agalactiae COH1]
gi|421146788|ref|ZP_15606491.1| GIY-YIG domain-containing protein [Streptococcus agalactiae
GB00112]
gi|77171743|gb|EAO74940.1| Endo/excinuclease amino terminal domain, putative [Streptococcus
agalactiae COH1]
gi|401686495|gb|EJS82472.1| GIY-YIG domain-containing protein [Streptococcus agalactiae
GB00112]
Length = 88
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQH 77
G Y GYT D RR+ HN GK GA T R P + L F + A+R E ++
Sbjct: 16 GTLYTGYTTDVKRRLNTHNTGK---GAKYTRARLPVKL-LYSEAFNSKQEAMRAEALFKQ 71
Query: 78 PKMSRRLQHVARKKSKE 94
+L ++ + K+++
Sbjct: 72 KTRKAKLTYIKQHKNEQ 88
>gi|431796718|ref|YP_007223622.1| endonuclease containing a URI domain [Echinicola vietnamensis DSM
17526]
gi|430787483|gb|AGA77612.1| putative endonuclease containing a URI domain [Echinicola
vietnamensis DSM 17526]
Length = 80
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMV 56
+Y++Y+ R Y+G+T D RR+++HN GK T PW+++
Sbjct: 1 MYVVYAIKSTVANRIYVGFTSDLKRRMREHNSGK----TKSTKGFMPWELI 47
>gi|410663348|ref|YP_006915719.1| Excinuclease ABC subunit C domain-containing protein [Simiduia
agarivorans SA1 = DSM 21679]
gi|409025705|gb|AFU97989.1| Excinuclease ABC subunit C domain-containing protein [Simiduia
agarivorans SA1 = DSM 21679]
Length = 97
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
VY++ + + GR Y G T DPDRR+ QH +GK GA R P M P+
Sbjct: 11 VYIIEASD----GRLYTGITTDPDRRLAQHKQGK---GAKFFRGRTPKAM-RYTESQPDH 62
Query: 66 ISALRFEWAWQHPKMSRRL 84
SAL+ E + S++L
Sbjct: 63 SSALKREMTIKRLTRSQKL 81
>gi|421498450|ref|ZP_15945557.1| GIY-YIG nuclease superfamily protein [Aeromonas media WS]
gi|407182549|gb|EKE56499.1| GIY-YIG nuclease superfamily protein [Aeromonas media WS]
Length = 114
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFE 72
G Y G + DP+RR++QH GK GA +GP +V G + ALR E
Sbjct: 24 GSLYAGISTDPERRLRQHQSGK---GARALRGKGPLTLVW-RQGVADKGEALRLE 74
>gi|378720306|ref|YP_005285195.1| putative nuclease [Gordonia polyisoprenivorans VH2]
gi|375755009|gb|AFA75829.1| putative nuclease [Gordonia polyisoprenivorans VH2]
Length = 106
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 34/67 (50%), Gaps = 8/67 (11%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
VY+L + Y Y+G TVD +RR+ +HN GK GA TS R P +V FP
Sbjct: 5 VYILECSDGSY----YVGSTVDLERRVNEHNDGK---GAAYTSRRRPVRVVFSEQ-FPTV 56
Query: 66 ISALRFE 72
A R E
Sbjct: 57 EEAYRLE 63
>gi|336421449|ref|ZP_08601607.1| hypothetical protein HMPREF0993_00984 [Lachnospiraceae bacterium
5_1_57FAA]
gi|336000728|gb|EGN30875.1| hypothetical protein HMPREF0993_00984 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 87
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKM 80
Y G+T D D+R+K HN GK GA T +R P +++ + A++ E+A +H M
Sbjct: 15 YTGWTNDIDKRLKAHNDGK---GAKYTKSRRPVELIYYE-KYETKEEAMKREYAIKH--M 68
Query: 81 SRRLQH 86
+RR +
Sbjct: 69 TRRAKE 74
>gi|90425145|ref|YP_533515.1| excinuclease ABC subunit C [Rhodopseudomonas palustris BisB18]
gi|90107159|gb|ABD89196.1| Excinuclease ABC, C subunit-like [Rhodopseudomonas palustris
BisB18]
Length = 101
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 8/69 (11%)
Query: 6 VYLL-YSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPN 64
VY+L + RYL TY+G+T+D DRR+ QHN G GA T R W ++L + +
Sbjct: 8 VYVLGCACGDRYL--TYVGWTLDLDRRLAQHNAGS---GARSTRGR-SW-VLLHAERYAS 60
Query: 65 DISALRFEW 73
A+ EW
Sbjct: 61 RSEAMSREW 69
>gi|83814954|ref|YP_446350.1| GIY-YIG catalytic domain-containing protein [Salinibacter ruber
DSM 13855]
gi|83756348|gb|ABC44461.1| GIY-YIG catalytic domain, putative [Salinibacter ruber DSM 13855]
Length = 100
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 8/74 (10%)
Query: 4 HGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFP 63
H VY++ R+ Y Y GYT D +RR+++HN+G A T R P +V V +
Sbjct: 15 HYVYVIECRDGTY----YTGYTTDVERRVEEHNEGT---AAKYTRGRRPVTLVH-VETYD 66
Query: 64 NDISALRFEWAWQH 77
+ +A++ E+A +
Sbjct: 67 SQSAAMQREYAIKQ 80
>gi|334702982|ref|ZP_08518848.1| GIY-YIG nuclease superfamily protein [Aeromonas caviae Ae398]
Length = 111
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEW 73
G Y G + DP+RR++QH GK GA +GP +V P ALR E+
Sbjct: 21 GALYAGISTDPERRLRQHQSGK---GARALRGKGPLSLVW-QQEVPGKREALRLEY 72
>gi|331092064|ref|ZP_08340895.1| hypothetical protein HMPREF9477_01538 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330402265|gb|EGG81836.1| hypothetical protein HMPREF9477_01538 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 83
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY--GFPNDISALRFEWAW 75
G Y G+T D ++RI+ HN+GK GA T R P V +VY FP A++ E+A
Sbjct: 13 GTLYTGWTNDLEKRIQSHNEGK---GAKYTKTRTP---VTLVYYETFPTKQEAMKREYAI 66
Query: 76 QH 77
+
Sbjct: 67 KQ 68
>gi|312863006|ref|ZP_07723244.1| GIY-YIG catalytic domain protein [Streptococcus vestibularis
F0396]
gi|311100542|gb|EFQ58747.1| GIY-YIG catalytic domain protein [Streptococcus vestibularis
F0396]
Length = 89
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY--GFPNDISALRFEWAW 75
G Y GYT D RR+K HN GK GA T R P V ++Y F + A+ E +
Sbjct: 18 GTLYTGYTTDVGRRLKTHNSGK---GAKYTRARLP---VKLIYSEAFDSKSEAMSAEALF 71
Query: 76 QHPKMSRRLQHV 87
+ ++L ++
Sbjct: 72 KKKSREKKLAYI 83
>gi|406917441|gb|EKD56232.1| hypothetical protein ACD_58C00258G0001, partial [uncultured
bacterium]
Length = 71
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 7/55 (12%)
Query: 1 MVFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDM 55
MV + +Y+L S+ + +TY+GYT D +R+K+HN + TS PW++
Sbjct: 11 MVNYYIYILKSK---IISKTYVGYTSDIQKRLKEHNSASN----KYTSKFKPWEL 58
>gi|340399425|ref|YP_004728450.1| putative endonuclease containing a URI domain [Streptococcus
salivarius CCHSS3]
gi|387760755|ref|YP_006067732.1| hypothetical protein Ssal_00489 [Streptococcus salivarius 57.I]
gi|338743418|emb|CCB93926.1| putative endonuclease containing a URI domain [Streptococcus
salivarius CCHSS3]
gi|339291522|gb|AEJ52869.1| conserved hypothetical protein [Streptococcus salivarius 57.I]
Length = 89
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQH 77
G Y GYT D +RR+K HN GK GA T R P ++ + F + A+ E ++
Sbjct: 18 GTLYTGYTTDVERRLKTHNAGK---GAKYTRARLPVKLLYSEF-FDSKPEAMSAEALFKK 73
Query: 78 PKMSRRLQHV 87
++L ++
Sbjct: 74 KSREKKLAYI 83
>gi|452990902|emb|CCQ97829.1| conserved hypothetical protein [Clostridium ultunense Esp]
Length = 84
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 6/63 (9%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKM 80
Y G+TVD ++R+K HN+GK + T R P +V V + N I+A + E WQ ++
Sbjct: 15 YTGWTVDLEKRLKIHNEGK---ASKYTRARLPVKLVY-VEKYENKINAQKRE--WQIKQL 68
Query: 81 SRR 83
SR+
Sbjct: 69 SRK 71
>gi|146319221|ref|YP_001198933.1| endonuclease [Streptococcus suis 05ZYH33]
gi|146321423|ref|YP_001201134.1| endonuclease [Streptococcus suis 98HAH33]
gi|386578391|ref|YP_006074797.1| Excinuclease ABC, C subunit, N-terminal, partial [Streptococcus
suis GZ1]
gi|145690027|gb|ABP90533.1| Predicted endonuclease containing a URI domain [Streptococcus
suis 05ZYH33]
gi|145692229|gb|ABP92734.1| Predicted endonuclease containing a URI domain [Streptococcus
suis 98HAH33]
gi|292558854|gb|ADE31855.1| Excinuclease ABC, C subunit, N-terminal [Streptococcus suis GZ1]
Length = 93
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQH 77
G Y GYT D ++R+ HN+GK GA T R P + L F + A+ E ++
Sbjct: 19 GSLYTGYTTDVEKRLATHNRGK---GAKYTRARLPVSL-LYQEDFDSKQEAMSAEALFKK 74
Query: 78 PKMSRRLQHVARKK 91
+L ++A +K
Sbjct: 75 RSRQSKLDYIAERK 88
>gi|229917425|ref|YP_002886071.1| excinuclease ABC subunit C [Exiguobacterium sp. AT1b]
gi|229468854|gb|ACQ70626.1| Excinuclease ABC C subunit domain protein [Exiguobacterium sp.
AT1b]
Length = 92
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWA 74
G Y GYT D ++R+ HN GK GA T R P + V F A+R+EW+
Sbjct: 14 GTYYTGYTTDVEKRLLAHNAGK---GAKYTKARLPVRL-RYVQSFETKREAMRYEWS 66
>gi|393762754|ref|ZP_10351380.1| excinuclease ABC subunit C [Alishewanella agri BL06]
gi|392606376|gb|EIW89261.1| excinuclease ABC subunit C [Alishewanella agri BL06]
Length = 91
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQH 77
G+ Y G + DP RR++QH +G+ GGA +GP + +VY P+ A + +Q
Sbjct: 14 GQLYTGISTDPVRRLRQH-RGELAGGAKSLRGKGP---LTLVYQQPHPCRASASKAEYQV 69
Query: 78 PKMSR 82
++S+
Sbjct: 70 KQLSK 74
>gi|421874152|ref|ZP_16305759.1| UPF0213 protein BH0048 [Brevibacillus laterosporus GI-9]
gi|372456807|emb|CCF15308.1| UPF0213 protein BH0048 [Brevibacillus laterosporus GI-9]
Length = 106
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 14/87 (16%)
Query: 4 HGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFP 63
H VY+L + G Y GYT + RR+KQH GK GA T R P ++V G
Sbjct: 18 HYVYMLQCAD----GSLYTGYTTEIQRRLKQHRIGK---GAKYTRGRCPIELVYWEEGAD 70
Query: 64 NDISALRFEWAWQHPKMSRRLQHVARK 90
W + + +RLQ A++
Sbjct: 71 RS-------WGLKREEQIKRLQRSAKE 90
>gi|253752262|ref|YP_003025403.1| hypothetical protein SSUSC84_1411 [Streptococcus suis SC84]
gi|253756022|ref|YP_003029162.1| hypothetical protein SSUBM407_1458 [Streptococcus suis BM407]
gi|386580460|ref|YP_006076865.1| endonuclease [Streptococcus suis JS14]
gi|386582535|ref|YP_006078939.1| endonuclease [Streptococcus suis SS12]
gi|386588660|ref|YP_006085061.1| endonuclease [Streptococcus suis A7]
gi|389857068|ref|YP_006359311.1| endonuclease [Streptococcus suis ST1]
gi|403062009|ref|YP_006650225.1| Excinuclease ABC, C subunit, N-terminal [Streptococcus suis S735]
gi|251816551|emb|CAZ52187.1| conserved hypothetical protein [Streptococcus suis SC84]
gi|251818486|emb|CAZ56315.1| conserved hypothetical protein [Streptococcus suis BM407]
gi|319758652|gb|ADV70594.1| endonuclease [Streptococcus suis JS14]
gi|353734681|gb|AER15691.1| endonuclease [Streptococcus suis SS12]
gi|353740786|gb|AER21793.1| endonuclease [Streptococcus suis ST1]
gi|354985821|gb|AER44719.1| endonuclease [Streptococcus suis A7]
gi|402809335|gb|AFR00827.1| Excinuclease ABC, C subunit, N-terminal [Streptococcus suis S735]
Length = 89
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQH 77
G Y GYT D ++R+ HN+GK GA T R P + L F + A+ E ++
Sbjct: 15 GSLYTGYTTDVEKRLATHNRGK---GAKYTRARLPVSL-LYQEDFDSKQEAMSAEALFKK 70
Query: 78 PKMSRRLQHVARKK 91
+L ++A +K
Sbjct: 71 RSRQSKLDYIAERK 84
>gi|359419413|ref|ZP_09211371.1| hypothetical protein GOARA_036_01730 [Gordonia araii NBRC 100433]
gi|358244820|dbj|GAB09440.1| hypothetical protein GOARA_036_01730 [Gordonia araii NBRC 100433]
Length = 92
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 7/53 (13%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLI 58
+Y+L + Y Y+G TVD +RR+ +HN+GK GA T R P ++V +
Sbjct: 1 MYILRCADDSY----YVGSTVDIERRVIEHNEGK---GAAYTRRRRPVELVFV 46
>gi|253754088|ref|YP_003027229.1| hypothetical protein SSU1381 [Streptococcus suis P1/7]
gi|251820334|emb|CAR46877.1| conserved hypothetical protein [Streptococcus suis P1/7]
Length = 89
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQH 77
G Y GYT D ++R+ HN+GK GA T R P + L F + A+ E ++
Sbjct: 15 GSLYTGYTTDVEKRLATHNRGK---GAKYTRARLPGSL-LYQEDFDSKQEAMSAEALFKK 70
Query: 78 PKMSRRLQHVARKK 91
+L ++A +K
Sbjct: 71 RSRQSKLDYIAERK 84
>gi|417092632|ref|ZP_11957248.1| Excinuclease ABC C subunit domain protein [Streptococcus suis
R61]
gi|353532311|gb|EHC01983.1| Excinuclease ABC C subunit domain protein [Streptococcus suis
R61]
Length = 90
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 8/73 (10%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY--GFPNDISALRFEWAW 75
G Y GYT D ++R+ HN+GK GA T R P V +VY F + A+ E +
Sbjct: 15 GSLYTGYTTDVEKRLATHNRGK---GAKYTRARLP---VSLVYQEAFASKQEAMSAEALF 68
Query: 76 QHPKMSRRLQHVA 88
+ +L ++A
Sbjct: 69 KKRSRQSKLDYIA 81
>gi|316933091|ref|YP_004108073.1| excinuclease ABC subunit C domain-containing protein
[Rhodopseudomonas palustris DX-1]
gi|315600805|gb|ADU43340.1| Excinuclease ABC C subunit domain protein [Rhodopseudomonas
palustris DX-1]
Length = 113
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 41/80 (51%), Gaps = 10/80 (12%)
Query: 6 VYLLYSRNP-RYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLI-VYGFP 63
VY+L + RYL TY+G+T+D DRR+ QHN G GA T R W VLI F
Sbjct: 12 VYVLGCASAGRYL--TYVGWTLDLDRRLSQHNAGT---GARSTRGRA-W--VLIHSERFT 63
Query: 64 NDISALRFEWAWQHPKMSRR 83
A+ EW + + RR
Sbjct: 64 CRRDAMSREWHLKRDRAFRR 83
>gi|311745564|ref|ZP_07719349.1| GIY-YIG domain protein [Algoriphagus sp. PR1]
gi|126578125|gb|EAZ82345.1| GIY-YIG domain protein [Algoriphagus sp. PR1]
Length = 77
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGK 39
++ +Y+ GR Y+G+T D +RR+K+HN GK
Sbjct: 1 MFTVYALKSEKDGRIYVGFTQDINRRLKEHNSGK 34
>gi|443669895|ref|ZP_21135045.1| putative uncharacterized protein [Rhodococcus sp. AW25M09]
gi|443417511|emb|CCQ13380.1| putative uncharacterized protein [Rhodococcus sp. AW25M09]
Length = 316
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 13/65 (20%)
Query: 5 GVYLLYSRNPRYLG--RTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
GVY+L +P LG + Y+G D RR+K H KDF WD V+++
Sbjct: 52 GVYVLIGESPESLGGQQVYVGEGDDVSRRLKDHEGKKDF-----------WDRVVVLTSK 100
Query: 63 PNDIS 67
++++
Sbjct: 101 DSNLT 105
>gi|168214458|ref|ZP_02640083.1| GIY-YIG domain protein [Clostridium perfringens CPE str. F4969]
gi|170714078|gb|EDT26260.1| GIY-YIG domain protein [Clostridium perfringens CPE str. F4969]
Length = 93
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKM 80
Y G+T + ++RIK HN G GA T RGP +V F N A E+ +
Sbjct: 15 YTGWTNNLEKRIKAHNNG---CGAKYTRGRGPVKLVYFE-SFENKREAQSREYYIKKLTR 70
Query: 81 SRRLQHVARKKSKETTY 97
+++L+ ++ K KE Y
Sbjct: 71 NQKLKLISSKSIKEENY 87
>gi|300768202|ref|ZP_07078107.1| endo/exonuclease amino terminal GIY-YIG domain protein
[Lactobacillus plantarum subsp. plantarum ATCC 14917]
gi|380032825|ref|YP_004889816.1| endonuclease, GIY-YIG nuclease superfamily [Lactobacillus
plantarum WCFS1]
gi|418275569|ref|ZP_12890892.1| endonuclease, GIY-YIG nuclease superfamily [Lactobacillus
plantarum subsp. plantarum NC8]
gi|38258750|sp|Q88VJ1.1|Y2058_LACPL RecName: Full=UPF0213 protein lp_2058
gi|300494266|gb|EFK29429.1| endo/exonuclease amino terminal GIY-YIG domain protein
[Lactobacillus plantarum subsp. plantarum ATCC 14917]
gi|342242068|emb|CCC79302.1| endonuclease, GIY-YIG nuclease superfamily [Lactobacillus
plantarum WCFS1]
gi|376009120|gb|EHS82449.1| endonuclease, GIY-YIG nuclease superfamily [Lactobacillus
plantarum subsp. plantarum NC8]
Length = 101
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY-GFPNDISALRFEWAWQHPK 79
Y G+T + RR+ HN GK GA T R + LI + F + SAL+ E+A++H
Sbjct: 30 YGGFTDNLQRRLATHNAGK---GAKYTRVRSRRPLQLIYHETFTDKSSALKAEYAFKHQS 86
Query: 80 MSRRLQHVA 88
+ +L++++
Sbjct: 87 RAAKLKYLS 95
>gi|167760264|ref|ZP_02432391.1| hypothetical protein CLOSCI_02637 [Clostridium scindens ATCC
35704]
gi|167662147|gb|EDS06277.1| GIY-YIG catalytic domain protein [Clostridium scindens ATCC
35704]
Length = 95
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKM 80
Y G+T D D+R+K HN GK GA T +R P +++ + A++ E+A +H M
Sbjct: 23 YTGWTNDIDKRLKAHNDGK---GAKYTKSRRPVELIYYE-KYETKEEAMKREYAIKH--M 76
Query: 81 SRRLQH 86
+RR +
Sbjct: 77 TRRAKE 82
>gi|449483046|ref|XP_002191665.2| PREDICTED: dystrophin [Taeniopygia guttata]
Length = 3669
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 29 DRRIKQ-HNKGKDFGGAHK----TSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKMSRR 83
D RIKQ H +DFG + TS +GPW+ + P I+ W HPKM+
Sbjct: 3039 DERIKQLHEAHRDFGPTSQHFLTTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTEL 3098
Query: 84 LQHVA 88
Q +A
Sbjct: 3099 YQSLA 3103
>gi|354806909|ref|ZP_09040387.1| putative endonuclease [Lactobacillus curvatus CRL 705]
gi|354514549|gb|EHE86518.1| putative endonuclease [Lactobacillus curvatus CRL 705]
Length = 91
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKM 80
Y G+T D +R+ HN GK GA T R P + L F + +AL+ E+A++H
Sbjct: 19 YGGFTTDVTKRVATHNAGK---GAKYTKLRRPVRL-LYFETFSDKSAALKAEYAFKHQPR 74
Query: 81 SRRLQHV 87
++ Q++
Sbjct: 75 RKKEQYL 81
>gi|421661354|ref|ZP_16101530.1| GIY-YIG catalytic domain protein [Acinetobacter baumannii OIFC110]
gi|408715766|gb|EKL60888.1| GIY-YIG catalytic domain protein [Acinetobacter baumannii OIFC110]
Length = 305
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 19/103 (18%)
Query: 5 GVYLLYSRNPR--YLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
GVY L S +P R YIG + D R+KQHN+ ++ GG + W+ V +V
Sbjct: 52 GVYFLISHDPENPLYPRVYIGESDDVANRLKQHNRTEESGG------KDFWEKVCLVTSK 105
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSK-----ETTYTYC 100
+++ ++ + RL +A++ + T Y+Y
Sbjct: 106 DQNLTKAHIKY------LESRLMDIAKQNGQCQLENGTAYSYS 142
>gi|418968400|ref|ZP_13520013.1| GIY-YIG catalytic domain protein [Streptococcus mitis SK616]
gi|418976098|ref|ZP_13523986.1| GIY-YIG catalytic domain protein [Streptococcus mitis SK575]
gi|383340261|gb|EID18569.1| GIY-YIG catalytic domain protein [Streptococcus mitis SK616]
gi|383351912|gb|EID29670.1| GIY-YIG catalytic domain protein [Streptococcus mitis SK575]
Length = 95
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
+Y+L R+ Y Y GYT D RR+ HN GK GA T R P ++ GF +
Sbjct: 7 MYVLECRDGSY----YTGYTTDVRRRLAVHNSGK---GAKYTRARLPVKLI-YAQGFASK 58
Query: 66 ISALRFEWAWQHPKMSRRLQHVARKKSK 93
A+ E + K S++ + ++ + +
Sbjct: 59 EEAMSAEALLKRKKRSQKEEFLSENQDR 86
>gi|423070035|ref|ZP_17058811.1| hypothetical protein HMPREF9177_00128 [Streptococcus intermedius
F0413]
gi|355366356|gb|EHG14074.1| hypothetical protein HMPREF9177_00128 [Streptococcus intermedius
F0413]
Length = 87
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQH 77
G Y GYT D +R+ HN GK GA T R P + L F N SA+ E ++
Sbjct: 15 GSLYTGYTTDVQKRVTAHNAGK---GAKYTRARLPVTL-LYQEEFSNKPSAMSAEALFKR 70
Query: 78 PKMSRRLQHVARKKSK 93
++L ++ K K
Sbjct: 71 KTRQQKLAYINEHKKK 86
>gi|15903433|ref|NP_358983.1| hypothetical protein spr1390 [Streptococcus pneumoniae R6]
gi|116515348|ref|YP_816824.1| hypothetical protein SPD_1364 [Streptococcus pneumoniae D39]
gi|149021809|ref|ZP_01835816.1| hypothetical protein CGSSp23BS72_09603 [Streptococcus pneumoniae
SP23-BS72]
gi|387626758|ref|YP_006062934.1| hypothetical protein INV104_13070 [Streptococcus pneumoniae
INV104]
gi|418076730|ref|ZP_12713964.1| hypothetical protein SPAR98_1655 [Streptococcus pneumoniae
GA47502]
gi|418103199|ref|ZP_12740272.1| hypothetical protein SPAR143_1478 [Streptococcus pneumoniae
NP070]
gi|419475861|ref|ZP_14015699.1| hypothetical protein SPAR36_1465 [Streptococcus pneumoniae
GA14688]
gi|419487019|ref|ZP_14026781.1| hypothetical protein SPAR79_1531 [Streptococcus pneumoniae
GA44128]
gi|421241010|ref|ZP_15697555.1| GIY-YIG catalytic domain protein [Streptococcus pneumoniae
2080913]
gi|444382630|ref|ZP_21180831.1| GIY-YIG catalytic domain protein [Streptococcus pneumoniae
PCS8106]
gi|444385113|ref|ZP_21183197.1| GIY-YIG catalytic domain protein [Streptococcus pneumoniae
PCS8203]
gi|54036641|sp|Q8DP31.1|Y1390_STRR6 RecName: Full=UPF0213 protein spr1390
gi|122278330|sp|Q04JL4.1|Y1364_STRP2 RecName: Full=UPF0213 protein SPD_1364
gi|15459040|gb|AAL00194.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
gi|116075924|gb|ABJ53644.1| conserved hypothetical protein [Streptococcus pneumoniae D39]
gi|147930045|gb|EDK81032.1| hypothetical protein CGSSp23BS72_09603 [Streptococcus pneumoniae
SP23-BS72]
gi|301794544|emb|CBW36988.1| conserved hypothetical protein [Streptococcus pneumoniae INV104]
gi|353748165|gb|EHD28820.1| hypothetical protein SPAR98_1655 [Streptococcus pneumoniae
GA47502]
gi|353775097|gb|EHD55580.1| hypothetical protein SPAR143_1478 [Streptococcus pneumoniae
NP070]
gi|379559553|gb|EHZ24581.1| hypothetical protein SPAR36_1465 [Streptococcus pneumoniae
GA14688]
gi|379585388|gb|EHZ50244.1| hypothetical protein SPAR79_1531 [Streptococcus pneumoniae
GA44128]
gi|395607388|gb|EJG67485.1| GIY-YIG catalytic domain protein [Streptococcus pneumoniae
2080913]
gi|444251063|gb|ELU57537.1| GIY-YIG catalytic domain protein [Streptococcus pneumoniae
PCS8203]
gi|444251885|gb|ELU58352.1| GIY-YIG catalytic domain protein [Streptococcus pneumoniae
PCS8106]
Length = 99
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
+Y+L R+ Y YIGYT D RR+ HN GK GA T R P ++ GF +
Sbjct: 7 MYVLECRDGSY----YIGYTTDMRRRLAIHNSGK---GAKYTRARLPVKLI-YAQGFASK 58
Query: 66 ISALRFEWAWQHPKMSRRLQHVARKKSK 93
A+ E ++ K ++ + ++ + +
Sbjct: 59 EEAMSAEALFKRKKRPQKEEFLSENQDR 86
>gi|357236959|ref|ZP_09124302.1| hypothetical protein STRCR_2028 [Streptococcus criceti HS-6]
gi|356884941|gb|EHI75141.1| hypothetical protein STRCR_2028 [Streptococcus criceti HS-6]
Length = 335
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYG--FPNDISALRFEWAW 75
G Y GYT D D+RI HN GK GA T +R P V ++Y F + +A+ E +
Sbjct: 265 GSLYTGYTTDLDKRIATHNAGK---GAKYTKSRLP---VKLIYSETFNHKNAAMSAEAKF 318
Query: 76 QHPKMSRRLQHV 87
++ +++ ++
Sbjct: 319 KNKTRQQKIAYI 330
>gi|409196237|ref|ZP_11224900.1| excinuclease ABC C subunit domain-containing protein
[Marinilabilia salmonicolor JCM 21150]
Length = 78
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 11/70 (15%)
Query: 4 HGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY-GF 62
H VY+L + Y Y G T + + R+K+HN G H TSNR P ++LI Y F
Sbjct: 2 HYVYILKCADHSY----YTGCTQNIEERLKKHNAGH----VHYTSNRLP--VMLISYLAF 51
Query: 63 PNDISALRFE 72
P+ A FE
Sbjct: 52 PDKYKAFNFE 61
>gi|387928196|ref|ZP_10130874.1| GIY-YIG nuclease superfamily protein [Bacillus methanolicus PB1]
gi|387587782|gb|EIJ80104.1| GIY-YIG nuclease superfamily protein [Bacillus methanolicus PB1]
Length = 97
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
Query: 4 HGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFP 63
H Y+L ++ G Y GYT + ++R++ HNKGK A T RGP +V F
Sbjct: 6 HFFYVLECKD----GSLYAGYTNNLEKRLELHNKGK---AAKYTRGRGPVKLVHSRQ-FK 57
Query: 64 NDISALRFEWAWQ 76
N AL+ E+ ++
Sbjct: 58 NKSEALKAEFEFK 70
>gi|431796719|ref|YP_007223623.1| endonuclease containing a URI domain [Echinicola vietnamensis DSM
17526]
gi|430787484|gb|AGA77613.1| putative endonuclease containing a URI domain [Echinicola
vietnamensis DSM 17526]
Length = 81
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
+Y +Y+ R Y+G+T D RR+++HN GK T PW ++ P
Sbjct: 1 MYTVYAIKSTVANRIYVGFTSDLKRRMREHNSGK----TKSTKGFMPWKLIFTEEVEPRV 56
Query: 66 ISALRFEWAWQHPKMSRRLQHV 87
++ +R E W+ ++L+ +
Sbjct: 57 LARIR-EKYWKSGIGKKKLKSL 77
>gi|398798043|ref|ZP_10557345.1| putative endonuclease containing a URI domain containing protein
[Pantoea sp. GM01]
gi|398101291|gb|EJL91514.1| putative endonuclease containing a URI domain containing protein
[Pantoea sp. GM01]
Length = 95
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND-ISALRFEWAWQ 76
G Y G T D +RR++QH +G+ GA +GP + L+ + D +A R E+ +
Sbjct: 15 GMLYTGITTDVNRRLQQHQQGR---GARSLRGKGP--LTLVFHCDAGDRAAASRLEYQVK 69
Query: 77 HPKMSRRLQHVARKKSKETTY 97
+++L+ VA++ TT+
Sbjct: 70 QLSRAQKLRLVAQQPPCLTTW 90
>gi|415883928|ref|ZP_11545957.1| GIY-YIG nuclease superfamily protein [Bacillus methanolicus MGA3]
gi|387591723|gb|EIJ84040.1| GIY-YIG nuclease superfamily protein [Bacillus methanolicus MGA3]
Length = 97
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 12/75 (16%)
Query: 4 HGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYG-- 61
H Y+L ++ G Y GYT + ++R+K HN+GK A T RGP V +VY
Sbjct: 6 HFFYVLECKD----GSLYAGYTNNLEKRLKLHNEGK---AAKYTRGRGP---VKLVYSQQ 55
Query: 62 FPNDISALRFEWAWQ 76
F + AL+ E+ ++
Sbjct: 56 FNDKSEALKAEYQFK 70
>gi|115525699|ref|YP_782610.1| excinuclease ABC subunit C [Rhodopseudomonas palustris BisA53]
gi|115519646|gb|ABJ07630.1| Excinuclease ABC, C subunit domain protein [Rhodopseudomonas
palustris BisA53]
Length = 102
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 6 VYLL-YSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPN 64
VY+L + RYL TY+G+T+D DRR+ QHN G GA T R W ++L F +
Sbjct: 14 VYVLGCAGRDRYL--TYVGWTLDLDRRLAQHNAGT---GARSTRGR-VW-VLLHSERFSS 66
Query: 65 DISALRFEWAWQHPKMSRR 83
A+ EW + + R+
Sbjct: 67 RSEAMSREWHLKRDRAFRK 85
>gi|223933344|ref|ZP_03625332.1| Excinuclease ABC C subunit domain protein [Streptococcus suis
89/1591]
gi|330833193|ref|YP_004402018.1| excinuclease ABC subunit C [Streptococcus suis ST3]
gi|386584590|ref|YP_006080993.1| Excinuclease ABC C subunit domain-containing protein
[Streptococcus suis D9]
gi|223897994|gb|EEF64367.1| Excinuclease ABC C subunit domain protein [Streptococcus suis
89/1591]
gi|329307416|gb|AEB81832.1| Excinuclease ABC C subunit domain protein [Streptococcus suis
ST3]
gi|353736736|gb|AER17745.1| Excinuclease ABC C subunit domain protein [Streptococcus suis D9]
Length = 90
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQH 77
G Y GYT D ++R+ HN+GK GA T R P + L F + A+ E ++
Sbjct: 15 GSLYTGYTTDVEKRLATHNRGK---GAKYTRGRLPVSL-LYQEAFASKQEAMSAEALFKK 70
Query: 78 PKMSRRLQHVA 88
+L ++A
Sbjct: 71 RSRQSKLDYIA 81
>gi|389737214|ref|ZP_10190679.1| tRNA/rRNA methyltransferase [Rhodanobacter sp. 115]
gi|388436778|gb|EIL93624.1| tRNA/rRNA methyltransferase [Rhodanobacter sp. 115]
Length = 97
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQH 77
G YIG+T D D+R++QH++GK G TS R P ++ GF AL E +
Sbjct: 13 GSFYIGHTDDLDKRMEQHDQGK---GCVYTSTRRPLKLI-HTQGFETRYEALTMERKLKG 68
Query: 78 PKMSRRLQHVA 88
+++L ++A
Sbjct: 69 WSRAKKLAYMA 79
>gi|386720146|ref|YP_006186472.1| endonuclease containing a URI domain [Stenotrophomonas
maltophilia D457]
gi|384079708|emb|CCH14311.1| putative endonuclease containing a URI domain [Stenotrophomonas
maltophilia D457]
Length = 91
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
+YLL R+ G Y G + D + R H GK GA T R P VL V +P+
Sbjct: 10 LYLLECRD----GSYYAGISTDVEARFAAHQAGK---GARYTRARPPL-RVLAVREYPDR 61
Query: 66 ISALRFEWAWQHPKMSRRL 84
+A R EW + R+L
Sbjct: 62 AAASRAEWQLKQQPRERKL 80
>gi|350264135|ref|YP_004875442.1| protein YazA [Bacillus subtilis subsp. spizizenii TU-B-10]
gi|349597022|gb|AEP84810.1| protein YazA [Bacillus subtilis subsp. spizizenii TU-B-10]
Length = 99
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKM 80
Y GYT D +R+K HN GK GA T R P +++ F A++ E+ ++ K+
Sbjct: 19 YAGYTNDLQKRVKTHNDGK---GAKYTKVRRPVELIF-AEAFTTKREAMQAEYYFK--KL 72
Query: 81 SRRLQHV---ARKKSKETTY 97
+R+ + + ++ SKE Y
Sbjct: 73 TRKKKELYIEEKRNSKEAVY 92
>gi|300721550|ref|YP_003710825.1| hypothetical protein XNC1_0517 [Xenorhabdus nematophila ATCC
19061]
gi|297628042|emb|CBJ88591.1| conserved hypothetical protein [Xenorhabdus nematophila ATCC
19061]
Length = 103
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 10/69 (14%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
+YL+ ++N G Y G T D RR+ QH GK GA +GP ++L+ G D
Sbjct: 8 LYLIRAQN----GALYTGITTDVSRRLMQHTSGK---GAKALRGKGP--LILVYQGLVKD 58
Query: 66 -ISALRFEW 73
+AL+ E+
Sbjct: 59 RGTALKAEY 67
>gi|310831143|ref|YP_003969786.1| putative GIY-YIG endonuclease [Cafeteria roenbergensis virus
BV-PW1]
gi|309386327|gb|ADO67187.1| putative GIY-YIG endonuclease [Cafeteria roenbergensis virus
BV-PW1]
Length = 103
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTS---NRGPWDMVLIVYGF 62
+YLLY +N RTY+G + + RR +QHN G+ GGA T+ + G W V I
Sbjct: 5 LYLLYHQNK---NRTYLGISNNLKRRWRQHN-GEIKGGAKSTTALLSYGKWTPVCIS-PM 59
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIM 107
+ SAL +E ++ + + HV K+ + + L++++I+
Sbjct: 60 KDKSSALSYEIKIKNMRRKAKGNHVILKRINLMEF-FNLKIVYIL 103
>gi|443635074|ref|ZP_21119244.1| protein YazA [Bacillus subtilis subsp. inaquosorum KCTC 13429]
gi|443345127|gb|ELS59194.1| protein YazA [Bacillus subtilis subsp. inaquosorum KCTC 13429]
Length = 99
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKM 80
Y GYT D +R+K HN GK GA T R P +++ F A++ E+ ++ K+
Sbjct: 19 YAGYTNDLQKRVKTHNDGK---GAKYTKVRRPVELIF-AEAFTTKREAMQAEYYFK--KL 72
Query: 81 SRRLQHV---ARKKSKETTY 97
+R+ + + ++ SKE Y
Sbjct: 73 TRKKKELYIEEKRNSKEAVY 92
>gi|306833036|ref|ZP_07466168.1| endo/exonuclease amino terminal GIY-YIG domain protein
[Streptococcus bovis ATCC 700338]
gi|336063875|ref|YP_004558734.1| putative endonuclease [Streptococcus pasteurianus ATCC 43144]
gi|304424935|gb|EFM28069.1| endo/exonuclease amino terminal GIY-YIG domain protein
[Streptococcus bovis ATCC 700338]
gi|334282075|dbj|BAK29648.1| putative endonuclease [Streptococcus pasteurianus ATCC 43144]
Length = 93
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY--GFPNDISALRFEWAW 75
G Y GYT + ++RIK HN GK GA T +R P V ++Y F + +A+ E +
Sbjct: 21 GTLYTGYTTNVEKRIKTHNSGK---GAKYTRSRLP---VKLIYQKSFDSKEAAMSAESYF 74
Query: 76 QHPKMSRRLQHV 87
+ ++L ++
Sbjct: 75 KQKTRQQKLAYI 86
>gi|320159475|ref|YP_004172699.1| hypothetical protein ANT_00650 [Anaerolinea thermophila UNI-1]
gi|319993328|dbj|BAJ62099.1| hypothetical protein ANT_00650 [Anaerolinea thermophila UNI-1]
Length = 88
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 10/73 (13%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQH 77
G Y G+T DP RR +QHN G+ GA T R P + I P+ +A+R E
Sbjct: 14 GTYYTGWTTDPQRRARQHNAGR---GARYTRTRLPVRLAYIE-PQPDRATAMRRE----- 64
Query: 78 PKMSRRLQHVARK 90
+ +RL H ++
Sbjct: 65 -RQIKRLSHAQKQ 76
>gi|448730716|ref|ZP_21713021.1| Excinuclease ABC C subunit domain protein [Halococcus
saccharolyticus DSM 5350]
gi|445793157|gb|EMA43747.1| Excinuclease ABC C subunit domain protein [Halococcus
saccharolyticus DSM 5350]
Length = 87
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 10/81 (12%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYG 61
V H VY++ + G Y GYT D RR+++HN G+ GA T R P ++ V
Sbjct: 8 VSHHVYVIECDD----GSLYTGYTTDVGRRVREHNAGE---GAKYTRGRTPVEL-RHVET 59
Query: 62 FPNDISALRFEWAWQHPKMSR 82
F +AL E A + ++SR
Sbjct: 60 FAEKGAALSREHAIK--RLSR 78
>gi|407770955|ref|ZP_11118319.1| hypothetical protein TH3_15709 [Thalassospira xiamenensis M-5 =
DSM 17429]
gi|407286007|gb|EKF11499.1| hypothetical protein TH3_15709 [Thalassospira xiamenensis M-5 =
DSM 17429]
Length = 84
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 3 FHGVYLLYSRN-PRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYG 61
F VY+L R PR RTY+G++ D + R+ HN GK GA T R W++V V
Sbjct: 4 FTFVYVLREREVPR--PRTYVGWSTDVEARLATHNSGK---GAKTTRGR-QWELVY-VER 56
Query: 62 FPNDISALRFEWAWQHPKMSRRLQHV 87
F A+ EW H K R+L+ +
Sbjct: 57 FRTFGEAMSREW---HLKRDRKLRRM 79
>gi|58425553|gb|AAW74590.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC
10331]
Length = 202
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
+YLL RN Y Y G T D +RR + H G G + +N P VL + +P+
Sbjct: 110 LYLLLCRNGSY----YAGITNDLERRFQAHLHGT--GARYTRAN--PPVQVLASHRYPDR 161
Query: 66 ISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHI 106
SA R E A + +R+L + + S +++ + HI
Sbjct: 162 ASASRAECALKRQPRARKLAWLQAQSSDTESHSADASITHI 202
>gi|374595059|ref|ZP_09668063.1| Excinuclease ABC C subunit domain protein [Gillisia limnaea DSM
15749]
gi|373869698|gb|EHQ01696.1| Excinuclease ABC C subunit domain protein [Gillisia limnaea DSM
15749]
Length = 81
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 5 GVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPN 64
GVY+L N G+ Y GYT + D+R+ H KGK + T ++ P ++V + FPN
Sbjct: 6 GVYILKCSN----GQHYTGYTENIDQRLIAHQKGK----VNFTKDKLPVELVHLSL-FPN 56
Query: 65 DISALRFE 72
A FE
Sbjct: 57 KKKACYFE 64
>gi|160936864|ref|ZP_02084229.1| hypothetical protein CLOBOL_01753 [Clostridium bolteae ATCC
BAA-613]
gi|158440245|gb|EDP17991.1| hypothetical protein CLOBOL_01753 [Clostridium bolteae ATCC
BAA-613]
Length = 113
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY-GFPNDISALRFEWAWQ 76
G Y G+T D D+R+K HN+GK GA T R P +VL Y F A+ E+A +
Sbjct: 39 GTFYCGWTNDLDKRLKVHNQGK---GAKYTKPRRP--VVLSYYEAFETKQEAMSREYAIK 93
Query: 77 HPKMSR-RLQHVARK 90
H MSR +H+ +K
Sbjct: 94 H--MSRAEKEHLIKK 106
>gi|84622885|ref|YP_450257.1| GIY-YIG nuclease superfamily protein [Xanthomonas oryzae pv. oryzae
MAFF 311018]
gi|122879085|ref|YP_199975.6| GIY-YIG nuclease superfamily protein [Xanthomonas oryzae pv. oryzae
KACC 10331]
gi|188578063|ref|YP_001914992.1| GIY-YIG nuclease superfamily protein [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|123522767|sp|Q2P644.1|Y1228_XANOM RecName: Full=UPF0213 protein XOO1228
gi|84366825|dbj|BAE67983.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188522515|gb|ACD60460.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 101
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
+YLL RN Y Y G T D +RR + H G G + +N P VL + +P+
Sbjct: 9 LYLLLCRNGSY----YAGITNDLERRFQAHLHGT--GARYTRAN--PPVQVLASHRYPDR 60
Query: 66 ISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHI 106
SA R E A + +R+L + + S +++ + HI
Sbjct: 61 ASASRAECALKRQPRARKLAWLQAQSSDTESHSADASITHI 101
>gi|192292512|ref|YP_001993117.1| excinuclease ABC subunit C [Rhodopseudomonas palustris TIE-1]
gi|192286261|gb|ACF02642.1| Excinuclease ABC C subunit domain protein [Rhodopseudomonas
palustris TIE-1]
Length = 114
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 41/80 (51%), Gaps = 10/80 (12%)
Query: 6 VYLLYSRNP-RYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLI-VYGFP 63
VY+L + RYL TY+G+T+D DRR+ QHN G GA T R W VLI F
Sbjct: 12 VYVLGCASAGRYL--TYVGWTLDLDRRLTQHNTGT---GARSTRGRA-W--VLIHSERFT 63
Query: 64 NDISALRFEWAWQHPKMSRR 83
A+ EW + + RR
Sbjct: 64 CRRDAMSREWHLKRDRAFRR 83
>gi|319953747|ref|YP_004165014.1| excinuclease ABC c subunit domain protein [Cellulophaga algicola
DSM 14237]
gi|319422407|gb|ADV49516.1| Excinuclease ABC C subunit domain protein [Cellulophaga algicola
DSM 14237]
Length = 82
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 7/51 (13%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMV 56
VY+L S+ + R Y G+TVD D+RIK+HN GK T PW +V
Sbjct: 5 VYVLESKKDQ---RWYKGHTVDIDKRIKEHNSGK----TKSTKGFIPWRLV 48
>gi|189500867|ref|YP_001960337.1| excinuclease ABC C subunit domain-containing protein [Chlorobium
phaeobacteroides BS1]
gi|189496308|gb|ACE04856.1| Excinuclease ABC C subunit domain protein [Chlorobium
phaeobacteroides BS1]
Length = 84
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 7/51 (13%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMV 56
VY+L S+ + YIGYT D DRRI +HN+G F + T++R P ++V
Sbjct: 4 VYVLRSKKDEHY---YIGYTSDLDRRIDEHNQG--FSKS--TAHRRPLELV 47
>gi|407010787|gb|EKE25584.1| hypothetical protein ACD_5C00105G0001 [uncultured bacterium]
Length = 87
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 7/51 (13%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMV 56
YLL S +TY+G T D +RR+K+HN GK T NR P ++
Sbjct: 6 TYLLLSGKD---NKTYLGSTDDIERRVKEHNNGK----TSSTKNRRPLKLI 49
>gi|452854098|ref|YP_007495781.1| UPF0213 protein yazA [Bacillus amyloliquefaciens subsp. plantarum
UCMB5036]
gi|452078358|emb|CCP20108.1| UPF0213 protein yazA [Bacillus amyloliquefaciens subsp. plantarum
UCMB5036]
Length = 99
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKM 80
Y GYT D +R+K HN+GK GA T R P + F A++ E+ ++
Sbjct: 19 YAGYTNDLQKRLKTHNEGK---GAKYTRARRPVSLCH-AESFETKREAMQAEYRFKLLTR 74
Query: 81 SRRLQHVARK-KSKETTY 97
++ Q++ K +SKE Y
Sbjct: 75 KKKEQYIEEKRRSKEAVY 92
>gi|421807570|ref|ZP_16243430.1| GIY-YIG catalytic domain protein [Acinetobacter baumannii OIFC035]
gi|410416551|gb|EKP68323.1| GIY-YIG catalytic domain protein [Acinetobacter baumannii OIFC035]
Length = 303
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 14/91 (15%)
Query: 5 GVYLLYSRNPR--YLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
GVY L S +P R YIG + D R+KQHN+ ++ GG + W+ V ++
Sbjct: 52 GVYFLISHDPENPLYPRVYIGESDDVANRLKQHNRTEESGG------KDFWEKVCLITSK 105
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSK 93
+++ ++ + RL +A++ +
Sbjct: 106 DQNLTKAHIKY------LESRLMDIAKQNGQ 130
>gi|395801881|ref|ZP_10481136.1| putative endonuclease containing a URI domain [Flavobacterium sp.
F52]
gi|395436070|gb|EJG02009.1| putative endonuclease containing a URI domain [Flavobacterium sp.
F52]
Length = 83
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIV 59
VY+LYS + YIG T D D R+++HN G+ T N PW ++ +
Sbjct: 4 VYILYSATKE---KFYIGQTNDIDDRLRRHNSGQSLS----TKNGAPWKIIYTI 50
>gi|239624697|ref|ZP_04667728.1| conserved hypothetical protein [Clostridiales bacterium
1_7_47_FAA]
gi|239521083|gb|EEQ60949.1| conserved hypothetical protein [Clostridiales bacterium
1_7_47FAA]
Length = 93
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY-GFPNDISALRFEWAWQ 76
G Y G+T D D+R+K HN G+ GA T R P +VL Y F A++ E+A +
Sbjct: 12 GTLYCGWTNDLDKRLKAHNAGR---GAKYTRPRCP--VVLSYYEAFETKSEAMKREYAIK 66
Query: 77 HPKMSRRLQHV 87
H M+R+ + +
Sbjct: 67 H--MTRKQKEM 75
>gi|384420307|ref|YP_005629667.1| hypothetical protein XOC_3405 [Xanthomonas oryzae pv. oryzicola
BLS256]
gi|353463220|gb|AEQ97499.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 101
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
+YLL RN Y Y G T D +RR + H G G + +N P VL + +P+
Sbjct: 9 LYLLLCRNGSY----YAGITNDLERRFQAHLHGT--GARYTRAN--PPVQVLASHSYPDR 60
Query: 66 ISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHI 106
SA R E A + +R+L + + S + + + H+
Sbjct: 61 ASASRAECALKRQPRARKLAWLQAQSSNAESQSADASITHV 101
>gi|298250399|ref|ZP_06974203.1| Excinuclease ABC C subunit domain protein [Ktedonobacter
racemifer DSM 44963]
gi|297548403|gb|EFH82270.1| Excinuclease ABC C subunit domain protein [Ktedonobacter
racemifer DSM 44963]
Length = 122
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKM 80
Y GYT + RRI HN GK G H T P + L + FP ALR E+ +
Sbjct: 27 YTGYTNNLQRRIATHNAGK---GGHYTRAHRPVTL-LASWTFPGKSEALRAEYQIKCLTR 82
Query: 81 SRRLQHVAR 89
++LQ +A+
Sbjct: 83 QQKLQLIAQ 91
>gi|424788119|ref|ZP_18214881.1| GIY-YIG catalytic domain protein [Streptococcus intermedius BA1]
gi|422113228|gb|EKU16977.1| GIY-YIG catalytic domain protein [Streptococcus intermedius BA1]
Length = 87
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQH 77
G Y GYT D +R+ HN GK GA T R P + L F N SA+ E ++
Sbjct: 15 GSLYTGYTTDVQKRVTAHNAGK---GAKYTRVRLPVTL-LYQEEFSNKPSAMSAEALFKR 70
Query: 78 PKMSRRLQHVARKKSK 93
++L ++ K K
Sbjct: 71 KTRQQKLAYINEHKKK 86
>gi|339641159|ref|ZP_08662603.1| GIY-YIG catalytic domain protein [Streptococcus sp. oral taxon
056 str. F0418]
gi|339454428|gb|EGP67043.1| GIY-YIG catalytic domain protein [Streptococcus sp. oral taxon
056 str. F0418]
Length = 85
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY-GFPNDISALRFEWAWQ 76
G Y GYT + +R+ HN GK GA T R P + L+ Y FPN +A+ E ++
Sbjct: 15 GTLYTGYTTNIQKRLTVHNSGK---GAKYTRVRLP--VTLLYYEKFPNKSAAMSAEALFK 69
Query: 77 HPKMSRRLQHVARKK 91
+L ++ + K
Sbjct: 70 KKSRQEKLAYIKKGK 84
>gi|409387326|ref|ZP_11239562.1| COG2827: putative endonuclease containing a URI domain
[Lactococcus raffinolactis 4877]
gi|399205557|emb|CCK20477.1| COG2827: putative endonuclease containing a URI domain
[Lactococcus raffinolactis 4877]
Length = 96
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 8/55 (14%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYG--FPNDISALRFEW 73
Y GYT D ++RIK HN G+ GA T R P V ++Y FP+ AL+ E+
Sbjct: 17 YAGYTNDLEKRIKTHNAGQ---GAKYTKARRP---VKLIYSETFPDKSQALKREY 65
>gi|150389443|ref|YP_001319492.1| excinuclease ABC subunit C [Alkaliphilus metalliredigens QYMF]
gi|149949305|gb|ABR47833.1| Excinuclease ABC, C subunit domain protein [Alkaliphilus
metalliredigens QYMF]
Length = 82
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDIS-ALRFEWAWQ 76
G Y G+TVD + R+K HN+GK GA T N+ P + LI + D S A + E A Q
Sbjct: 12 GTYYTGWTVDLEARVKMHNEGK---GAKYTRNKRP--VKLIYWELKEDRSQAQKRERAIQ 66
Query: 77 HPKMSRRLQHV 87
S ++Q V
Sbjct: 67 KMNKSAKVQLV 77
>gi|365902642|ref|ZP_09440465.1| hypothetical protein LmalK3_03772 [Lactobacillus malefermentans
KCTC 3548]
Length = 92
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYG-FPNDISALRFEWAWQHPK 79
Y G++ D R++QH G+ GA T + + LI Y FP AL+ E+A++H
Sbjct: 21 YGGFSTDVFHRLEQHESGQ---GAKYTRPKFRHPLKLIYYEEFPTKSLALKAEYAFKHQP 77
Query: 80 MSRRLQHVAR 89
R+L+ +A
Sbjct: 78 KYRKLEFLAE 87
>gi|419783535|ref|ZP_14309321.1| GIY-YIG catalytic domain protein [Streptococcus oralis SK610]
gi|383182206|gb|EIC74766.1| GIY-YIG catalytic domain protein [Streptococcus oralis SK610]
Length = 90
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQH 77
G Y GYT D RR+ HN GK GA T R P ++ V GF + A+ E +
Sbjct: 15 GSYYTGYTTDVKRRLAVHNSGK---GAKYTRARLPVKLIY-VEGFASKEEAMSAEALLKR 70
Query: 78 PKMSRRLQHVARKKSK 93
K +++ ++ + K
Sbjct: 71 KKRPQKVSYLNDNREK 86
>gi|326913501|ref|XP_003203076.1| PREDICTED: dystrophin-like, partial [Meleagris gallopavo]
Length = 3368
Score = 35.8 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 29 DRRIKQ-HNKGKDFGGAHK----TSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKMSRR 83
D RI+Q H +DFG + TS +GPW+ + P I+ W HPKM+
Sbjct: 2702 DERIRQLHEAHRDFGPTSQHFLTTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTEL 2761
Query: 84 LQHVA 88
Q +A
Sbjct: 2762 YQSLA 2766
>gi|319953746|ref|YP_004165013.1| excinuclease ABC c subunit domain protein [Cellulophaga algicola
DSM 14237]
gi|319422406|gb|ADV49515.1| Excinuclease ABC C subunit domain protein [Cellulophaga algicola
DSM 14237]
Length = 82
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 7/53 (13%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLI 58
VY+L S + R Y G+TVD D+RIK+HN GK T PW +V
Sbjct: 5 VYVLESEKDQ---RWYKGHTVDIDKRIKEHNSGK----TKSTKGFIPWRLVCF 50
>gi|385804982|ref|YP_005841382.1| hypothetical protein Hqrw_4087 [Haloquadratum walsbyi C23]
gi|339730474|emb|CCC41813.1| UPF0213 family protein [Haloquadratum walsbyi C23]
Length = 89
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
+H VY++ + Y GYT D +RR+++HN G+ GA T R P +V Y F
Sbjct: 4 YHYVYIVECSDES----LYTGYTTDVERRVREHNAGE---GAKYTRGRTPVQLVHFEY-F 55
Query: 63 PNDISALRFE 72
+AL E
Sbjct: 56 DTRSAALSRE 65
>gi|45384284|ref|NP_990630.1| dystrophin [Gallus gallus]
gi|118684|sp|P11533.1|DMD_CHICK RecName: Full=Dystrophin
gi|63370|emb|CAA31746.1| unnamed protein product [Gallus gallus]
Length = 3660
Score = 35.8 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 29 DRRIKQ-HNKGKDFGGAHK----TSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKMSRR 83
D RI+Q H +DFG + TS +GPW+ + P I+ W HPKM+
Sbjct: 3029 DERIRQLHEAHRDFGPTSQHFLTTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTEL 3088
Query: 84 LQHVA 88
Q +A
Sbjct: 3089 YQSLA 3093
>gi|21232502|ref|NP_638419.1| GIY-YIG nuclease superfamily protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66767414|ref|YP_242176.1| GIY-YIG nuclease superfamily protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|188990517|ref|YP_001902527.1| GIY-YIG nuclease superfamily protein [Xanthomonas campestris pv.
campestris str. B100]
gi|23396981|sp|Q8P698.1|Y3072_XANCP RecName: Full=UPF0213 protein XCC3072
gi|81306606|sp|Q4UXR7.1|Y1086_XANC8 RecName: Full=UPF0213 protein XC_1086
gi|21114291|gb|AAM42343.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66572746|gb|AAY48156.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|167732277|emb|CAP50469.1| putative endonuclease [Xanthomonas campestris pv. campestris]
Length = 102
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
+YLL RN G Y G T D +RR + H +G GA T P VL + +P+
Sbjct: 9 LYLLLCRN----GSYYAGITNDLERRFQAHLRGT---GARYTRANPPL-QVLASHPYPDR 60
Query: 66 ISALRFEWAWQHPKMSRRL 84
+A R EW + +R+L
Sbjct: 61 ATASRAEWLLKQQPRARKL 79
>gi|395518770|ref|XP_003763531.1| PREDICTED: dystrophin-like [Sarcophilus harrisii]
Length = 3598
Score = 35.8 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 29 DRRIKQ-HNKGKDFGGAHK----TSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKMSRR 83
D RI+Q H +DFG + TS +GPW+ + P I+ W HPKM+
Sbjct: 2835 DERIRQLHEAHRDFGPTSQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTEL 2894
Query: 84 LQHVA 88
Q +A
Sbjct: 2895 YQSLA 2899
>gi|16077103|ref|NP_387916.1| GIY-YIG nuclease superfamily protein [Bacillus subtilis subsp.
subtilis str. 168]
gi|221307844|ref|ZP_03589691.1| GIY-YIG nuclease superfamily protein [Bacillus subtilis subsp.
subtilis str. 168]
gi|221312166|ref|ZP_03593971.1| GIY-YIG nuclease superfamily protein [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221317099|ref|ZP_03598393.1| GIY-YIG nuclease superfamily protein [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221321362|ref|ZP_03602656.1| GIY-YIG nuclease superfamily protein [Bacillus subtilis subsp.
subtilis str. SMY]
gi|321313705|ref|YP_004205992.1| GIY-YIG nuclease superfamily protein [Bacillus subtilis BSn5]
gi|402774278|ref|YP_006628222.1| UvrC-Intron-type (URI) endonuclease [Bacillus subtilis QB928]
gi|452912607|ref|ZP_21961235.1| GIY-YIG catalytic domain protein [Bacillus subtilis MB73/2]
gi|23396948|sp|O31414.1|YAZA_BACSU RecName: Full=UPF0213 protein YazA
gi|2632302|emb|CAB11811.1| putative UvrC-Intron-type (URI) endonuclease [Bacillus subtilis
subsp. subtilis str. 168]
gi|320019979|gb|ADV94965.1| GIY-YIG nuclease superfamily protein [Bacillus subtilis BSn5]
gi|402479464|gb|AFQ55973.1| Putative UvrC-Intron-type (URI) endonuclease [Bacillus subtilis
QB928]
gi|407955726|dbj|BAM48966.1| GIY-YIG nuclease superfamily protein [Bacillus subtilis BEST7613]
gi|407962997|dbj|BAM56236.1| GIY-YIG nuclease superfamily protein [Bacillus subtilis BEST7003]
gi|452117635|gb|EME08029.1| GIY-YIG catalytic domain protein [Bacillus subtilis MB73/2]
Length = 99
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKM 80
Y GYT D +R+K HN GK GA T R P +++ F A++ E+ ++ K+
Sbjct: 19 YAGYTNDLHKRVKTHNDGK---GAKYTKVRRPVELIF-AESFSTKREAMQAEYYFK--KL 72
Query: 81 SRRLQHV---ARKKSKETTY 97
+R+ + + ++ SKE Y
Sbjct: 73 TRKKKELYIEEKRNSKEAVY 92
>gi|169825665|ref|YP_001695823.1| hypothetical protein Bsph_0055 [Lysinibacillus sphaericus C3-41]
gi|168990153|gb|ACA37693.1| UPF0213 protein [Lysinibacillus sphaericus C3-41]
Length = 69
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKM 80
Y GYT + ++R+ HN GK GA T RGP + + A+R E+A++
Sbjct: 2 YAGYTNNVEKRVAVHNAGK---GAKYTRARGPVKCIYKEE-YETKEEAMRAEYAFKQLTR 57
Query: 81 SRRLQHVARKKS 92
++++ ++ R +S
Sbjct: 58 TQKIMYIRRGES 69
>gi|386756615|ref|YP_006229831.1| GIY-YIG nuclease superfamily protein [Bacillus sp. JS]
gi|384929897|gb|AFI26575.1| GIY-YIG nuclease superfamily protein [Bacillus sp. JS]
Length = 99
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKM 80
Y GYT D +R+K HN GK GA T R P +++ F A++ E+ ++ K+
Sbjct: 19 YAGYTNDLHKRVKTHNDGK---GAKYTKVRRPVELIF-AEAFDTKREAMQAEYYFK--KL 72
Query: 81 SRRLQHV---ARKKSKETTY 97
+R+ + + ++ SKE Y
Sbjct: 73 TRKKKELYIEEKRNSKEAVY 92
>gi|334329493|ref|XP_001379346.2| PREDICTED: dystrophin-like [Monodelphis domestica]
Length = 3802
Score = 35.8 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 29 DRRIKQ-HNKGKDFGGAHK----TSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKMSRR 83
D RI+Q H +DFG + TS +GPW+ + P I+ W HPKM+
Sbjct: 3054 DERIRQLHEAHRDFGPTSQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTEL 3113
Query: 84 LQHVA 88
Q +A
Sbjct: 3114 YQSLA 3118
>gi|417002751|ref|ZP_11942055.1| GIY-YIG catalytic domain protein [Anaerococcus prevotii
ACS-065-V-Col13]
gi|325479039|gb|EGC82140.1| GIY-YIG catalytic domain protein [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 85
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 7/53 (13%)
Query: 4 HGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMV 56
H VY+L ++ Y GYT D +RR+K HN GK GA T R P +V
Sbjct: 3 HFVYILRCKD----NSLYTGYTTDVNRRLKVHNSGK---GAKYTRGRRPVKLV 48
>gi|420266293|ref|ZP_14768775.1| endonuclease, GIY-YIG nuclease superfamily protein [Lactobacillus
mali KCTC 3596 = DSM 20444]
gi|394425789|gb|EJE98706.1| endonuclease, GIY-YIG nuclease superfamily protein [Lactobacillus
mali KCTC 3596 = DSM 20444]
Length = 97
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY-GFPNDISALRFEWAWQHPK 79
Y G+T D R+ HN GK GA T + + L+ Y F N +AL+ E+A++H
Sbjct: 21 YGGFTNDVSHRLAVHNAGK---GAKYTRLKSRRPVKLLYYEAFDNKSAALKAEYAFKHQL 77
Query: 80 MSRRLQHV 87
+++L+++
Sbjct: 78 RAQKLKYL 85
>gi|385811282|ref|YP_005847678.1| excinuclease ABC subunit C [Ignavibacterium album JCM 16511]
gi|383803330|gb|AFH50410.1| Excinuclease ABC subunit C [Ignavibacterium album JCM 16511]
Length = 89
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 17 LGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQ 76
+ YIGYT D +RR+ +HN GK + TS PW +V +++ A R E ++
Sbjct: 13 FDKIYIGYTSDLNRRLNEHNSGK----STYTSKFKPWKIVYYEECL-DELEARRREKYYK 67
Query: 77 HPKMSRRLQHV 87
R+++ +
Sbjct: 68 SAAGRRKIKKI 78
>gi|104774225|ref|YP_619205.1| hypothetical protein Ldb1346 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|103423306|emb|CAI98147.1| Conserved hypothetical protein [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
Length = 336
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQH 77
G Y GYT D +R+ HN GK GA T +RGP +M+ + + + +A++ E+ ++H
Sbjct: 264 GSFYGGYTNDLKKRLGAHNSGK---GAKYTKSRGPVEMIYL-EEYADKRTAMQREYWFKH 319
>gi|148251728|ref|YP_001236313.1| hypothetical protein BBta_0107 [Bradyrhizobium sp. BTAi1]
gi|146403901|gb|ABQ32407.1| hypothetical protein BBta_0107 [Bradyrhizobium sp. BTAi1]
Length = 83
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 7 YLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDI 66
Y+ R+ + + Y+G T D +R+K HN G+ AH TS PW +V P+
Sbjct: 3 YVYIIRSVTFPDQEYVGATADLRQRLKDHNAGR---SAH-TSKFMPWTLVWYC-ALPDKS 57
Query: 67 SALRFE 72
+AL FE
Sbjct: 58 NALAFE 63
>gi|384429031|ref|YP_005638391.1| GIY-YIG catalytic domain, putative [Xanthomonas campestris pv.
raphani 756C]
gi|341938134|gb|AEL08273.1| GIY-YIG catalytic domain, putative [Xanthomonas campestris pv.
raphani 756C]
Length = 113
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
+YLL RN G Y G T D +RR + H +G GA T P VL + +P+
Sbjct: 20 LYLLLCRN----GSYYAGITNDLERRFQAHLRGT---GARYTRANPPL-QVLASHPYPDR 71
Query: 66 ISALRFEWAWQHPKMSRRL 84
+A R EW + +R+L
Sbjct: 72 ATASRAEWLLKQQPRARKL 90
>gi|365924998|ref|ZP_09447761.1| endonuclease [Lactobacillus mali KCTC 3596 = DSM 20444]
Length = 85
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY-GFPNDISALRFEWAWQHPK 79
Y G+T D R+ HN GK GA T + + L+ Y F N +AL+ E+A++H
Sbjct: 9 YGGFTNDVSHRLAVHNAGK---GAKYTRLKSRRPVKLLYYEAFDNKSAALKAEYAFKHQL 65
Query: 80 MSRRLQHV 87
+++L+++
Sbjct: 66 RAQKLKYL 73
>gi|409200347|ref|ZP_11228550.1| hypothetical protein PflaJ_03360 [Pseudoalteromonas flavipulchra
JG1]
Length = 110
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Query: 4 HGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFP 63
++ LY R+ G Y G T + +RRI+QH GK GA +GP M+
Sbjct: 12 QAIWSLYILETRF-GHWYTGITTNVERRIEQHQAGK---GAKNLKGKGPL-MLKFQCAAG 66
Query: 64 NDISALRFEWAWQHPKMSRRLQHVARK 90
A + EW + ++++Q V K
Sbjct: 67 TKSQAAKLEWHVKQLTKAQKIQLVESK 93
>gi|365879331|ref|ZP_09418760.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
gi|365292698|emb|CCD91291.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
Length = 83
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 7 YLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDI 66
Y+ R+ + + YIG T D +R+K H+ G+ AH TS PW +V FP+
Sbjct: 3 YVYIIRSVSFPDQEYIGATADIRQRLKDHSAGR---SAH-TSKFMPWTLVWYC-AFPDKH 57
Query: 67 SALRFE 72
AL FE
Sbjct: 58 RALAFE 63
>gi|193211810|ref|YP_001997763.1| excinuclease ABCsubunit C domain-containing protein
[Chlorobaculum parvum NCIB 8327]
gi|193085287|gb|ACF10563.1| Excinuclease ABC C subunit domain protein [Chlorobaculum parvum
NCIB 8327]
Length = 90
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Query: 7 YLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDI 66
Y LY R Y+G + +P RR++ HN G + G TS PW +V +P+
Sbjct: 7 YFLYILKSEVADRYYVGVSSNPQRRLEYHN-GFEKGF---TSRYRPWAIVF-TRKYPSKA 61
Query: 67 SALRFEW---AWQHPKMSRRL 84
AL E AW+ KM RL
Sbjct: 62 QALVAETTVKAWKSSKMIERL 82
>gi|374620709|ref|ZP_09693243.1| putative endonuclease containing a URI domain [gamma
proteobacterium HIMB55]
gi|374303936|gb|EHQ58120.1| putative endonuclease containing a URI domain [gamma
proteobacterium HIMB55]
Length = 98
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMV 56
VYL+ + G Y G T D RR++QHN G+ GGA T R P D+V
Sbjct: 11 VYLMQCAD----GSFYTGVTTDLARRVRQHN-GEIVGGAGYTRGRRPVDLV 56
>gi|291521579|emb|CBK79872.1| Predicted endonuclease containing a URI domain [Coprococcus catus
GD/7]
Length = 115
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYG-FPNDISALRFEWAW- 75
G Y G+TVD + R+ HN GK GA T +R P + L Y F N A+R E+A
Sbjct: 40 GSLYTGWTVDLEMRVAAHNSGK---GAKYTKSRRP--VTLAYYEVFENRQDAMRREYAIK 94
Query: 76 QHPKMSR 82
Q PK +
Sbjct: 95 QLPKKEK 101
>gi|271499186|ref|YP_003332211.1| excinuclease ABC subunit C [Dickeya dadantii Ech586]
gi|270342741|gb|ACZ75506.1| Excinuclease ABC C subunit domain protein [Dickeya dadantii Ech586]
Length = 100
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 10/98 (10%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
VYLL + + G Y G T D DRR+ +H GK GA +GP ++L+ + D
Sbjct: 10 VYLLRTGS----GWLYTGITTDVDRRLAEHQNGK---GARSLRGKGP--LMLVYHCVAGD 60
Query: 66 IS-ALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLR 102
S AL++E+ + ++ + V + S T + C++
Sbjct: 61 RSTALKWEYRIKQLSKLQKERLVQHQPSTLTDFLPCVK 98
>gi|348025878|ref|YP_004765683.1| GIY-YIG catalytic domain protein [Megasphaera elsdenii DSM 20460]
gi|341821932|emb|CCC72856.1| GIY-YIG catalytic domain protein [Megasphaera elsdenii DSM 20460]
Length = 89
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEW 73
Y G+T+D +R+ HN G+ GA T +R P + GFP A+ +EW
Sbjct: 16 YTGWTLDVAKRVAAHNDGR---GAKYTRSRRPVTLAW-CQGFPTKHEAMHWEW 64
>gi|302024242|ref|ZP_07249453.1| hypothetical protein Ssui0_06614 [Streptococcus suis 05HAS68]
Length = 90
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQH 77
G Y GYT D ++R+ HN+GK G+ T R P + L F + A+ E ++
Sbjct: 15 GSLYTGYTTDVEKRLATHNRGK---GSKYTRGRLPVSL-LYQEAFASKQEAMSAEALFKK 70
Query: 78 PKMSRRLQHVA 88
+L ++A
Sbjct: 71 RSRQSKLDYIA 81
>gi|197302174|ref|ZP_03167233.1| hypothetical protein RUMLAC_00900 [Ruminococcus lactaris ATCC
29176]
gi|197298605|gb|EDY33146.1| GIY-YIG catalytic domain protein [Ruminococcus lactaris ATCC
29176]
Length = 88
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQH 77
G Y G+T D ++R+ HN GK GA T R P ++V F A++ E+A +
Sbjct: 12 GSLYTGWTNDLEQRVAAHNTGK---GAKYTKARRPVELVYFE-EFETKEQAMKREYAIKQ 67
Query: 78 PKMSRRLQHVARKK 91
+L+ V RK+
Sbjct: 68 MARKDKLELVRRKE 81
>gi|296329536|ref|ZP_06872022.1| GIY-YIG nuclease superfamily protein [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305672733|ref|YP_003864404.1| GIY-YIG nuclease superfamily protein [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296153279|gb|EFG94142.1| GIY-YIG nuclease superfamily protein [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305410976|gb|ADM36094.1| GIY-YIG nuclease superfamily protein [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 99
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKM 80
Y GYT D +R+K HN GK GA T R P +++ F A++ E+ ++ K+
Sbjct: 19 YAGYTNDLQKRVKTHNDGK---GAKYTKVRRPVELIFAEV-FTTKREAMQAEYYFK--KL 72
Query: 81 SRRLQHV---ARKKSKETTY 97
+R+ + + ++ SKE Y
Sbjct: 73 TRKKKELYIEEKRNSKEAVY 92
>gi|395841941|ref|XP_003793782.1| PREDICTED: dystrophin [Otolemur garnettii]
Length = 3677
Score = 35.4 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 31 RIKQ-HNKGKDFGGAHK----TSNRGPWDMVLIVYGFPNDISALRFEWAWQHPKMSRRLQ 85
RI+Q H +DFG A + TS +GPW+ + P I+ W HPKM+ Q
Sbjct: 3026 RIRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHQTQTTCWDHPKMTELYQ 3085
Query: 86 HVA 88
+A
Sbjct: 3086 SLA 3088
>gi|414163471|ref|ZP_11419718.1| hypothetical protein HMPREF9697_01619 [Afipia felis ATCC 53690]
gi|410881251|gb|EKS29091.1| hypothetical protein HMPREF9697_01619 [Afipia felis ATCC 53690]
Length = 91
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 20 TYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALRFEWAWQHPK 79
TY+G+T D +RR+ QHN G GA T R W ++L V F + A+ EW + +
Sbjct: 24 TYVGWTNDVERRLAQHNAGT---GARSTRGR-SW-VLLHVETFASRNEAMSREWHLKRDR 78
Query: 80 MSRR 83
R+
Sbjct: 79 AFRK 82
>gi|39936687|ref|NP_948963.1| excinuclease ABC subunit C [Rhodopseudomonas palustris CGA009]
gi|39650543|emb|CAE29066.1| Excinuclease ABC, C subunit, N-terminal [Rhodopseudomonas palustris
CGA009]
Length = 190
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 41/80 (51%), Gaps = 10/80 (12%)
Query: 6 VYLLYSRNP-RYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLI-VYGFP 63
VY+L + RY+ TY+G+T+D DRR+ QHN G GA T R W VLI F
Sbjct: 88 VYVLGCASAGRYV--TYVGWTLDLDRRLTQHNTGT---GARSTRGRA-W--VLIHSERFT 139
Query: 64 NDISALRFEWAWQHPKMSRR 83
A+ EW + + RR
Sbjct: 140 CRRDAMSREWHLKRDRAFRR 159
>gi|340357139|ref|ZP_08679765.1| excinuclease ABC subunit C [Sporosarcina newyorkensis 2681]
gi|339618609|gb|EGQ23203.1| excinuclease ABC subunit C [Sporosarcina newyorkensis 2681]
Length = 87
Score = 35.0 bits (79), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 8/78 (10%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYG--FPNDISALRFEWAW 75
G Y GYT D +RR++ HN+GK GA T R P V VY + A++ E+ +
Sbjct: 16 GSYYAGYTNDLERRLRVHNEGK---GAKYTRGRLP---VRYVYREMYETKREAMQAEYQF 69
Query: 76 QHPKMSRRLQHVARKKSK 93
+ S++ Q++ +++++
Sbjct: 70 KTLNRSQKEQYIRKERTE 87
>gi|312897458|ref|ZP_07756882.1| GIY-YIG nuclease family protein [Megasphaera micronuciformis
F0359]
gi|310621519|gb|EFQ05055.1| GIY-YIG nuclease family protein [Megasphaera micronuciformis
F0359]
Length = 98
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 18 GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMV 56
G Y GYT D RRI HN GK GA T++R P ++V
Sbjct: 13 GTFYTGYTTDTVRRIATHNSGK---GAKYTASRRPVELV 48
>gi|298529251|ref|ZP_07016654.1| Excinuclease ABC C subunit domain protein [Desulfonatronospira
thiodismutans ASO3-1]
gi|298510687|gb|EFI34590.1| Excinuclease ABC C subunit domain protein [Desulfonatronospira
thiodismutans ASO3-1]
Length = 92
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMV 56
VY+L S + GR Y G T D +R+ QHN +RGPWD++
Sbjct: 5 VYILQSSST---GRYYCGQTDDLTKRLAQHNDPSQMLTLTTKRHRGPWDLI 52
>gi|399046064|ref|ZP_10738601.1| putative endonuclease containing a URI domain [Brevibacillus sp.
CF112]
gi|433544155|ref|ZP_20500545.1| hypothetical protein D478_10645 [Brevibacillus agri BAB-2500]
gi|398055849|gb|EJL47899.1| putative endonuclease containing a URI domain [Brevibacillus sp.
CF112]
gi|432184511|gb|ELK42022.1| hypothetical protein D478_10645 [Brevibacillus agri BAB-2500]
Length = 99
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 4 HGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVL 57
H VY+L + G Y GYT + RR+ HN+GK GA T RGP +V
Sbjct: 19 HFVYILACAD----GSLYTGYTTELLRRLAMHNEGK---GAKYTRGRGPLALVF 65
>gi|187776736|ref|ZP_02993209.1| hypothetical protein CLOSPO_00251 [Clostridium sporogenes ATCC
15579]
gi|187775395|gb|EDU39197.1| GIY-YIG catalytic domain protein [Clostridium sporogenes ATCC
15579]
Length = 80
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 10/78 (12%)
Query: 6 VYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPND 65
VY++ R+ G Y G+T D +RRI +HNKGK GA T R P V++ + D
Sbjct: 4 VYIVECRD----GTLYTGWTTDIERRISEHNKGK---GAKYTRVRRP---VVLKHSEKFD 53
Query: 66 ISALRFEWAWQHPKMSRR 83
+ + + K+SR+
Sbjct: 54 TNREAMKRECEIKKLSRK 71
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.139 0.460
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,316,467,535
Number of Sequences: 23463169
Number of extensions: 90814112
Number of successful extensions: 204521
Number of sequences better than 100.0: 717
Number of HSP's better than 100.0 without gapping: 362
Number of HSP's successfully gapped in prelim test: 355
Number of HSP's that attempted gapping in prelim test: 203798
Number of HSP's gapped (non-prelim): 724
length of query: 133
length of database: 8,064,228,071
effective HSP length: 98
effective length of query: 35
effective length of database: 10,059,804,805
effective search space: 352093168175
effective search space used: 352093168175
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 71 (32.0 bits)