BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12152
(133 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0IH86|SLX1_XENLA Structure-specific endonuclease subunit slx1 OS=Xenopus laevis
GN=slx1a PE=2 SV=1
Length = 282
Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 83/127 (65%), Positives = 105/127 (82%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+GVYLL+ NP+Y GR YIG+TV+P+RRI+QHN GK GGA KTS RGPWDMVLIV+GF
Sbjct: 8 FYGVYLLFCTNPKYKGRIYIGFTVNPERRIQQHNGGKHKGGAWKTSGRGPWDMVLIVHGF 67
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
PNDI+ALRFEWAWQHP +SRRL HV RK K++++ + L +L ML+ APW RLPLT++W
Sbjct: 68 PNDIAALRFEWAWQHPHVSRRLTHVPRKTKKQSSFDFHLLVLCHMLRVAPWNRLPLTLRW 127
Query: 123 LKPEYQQ 129
L+ EY++
Sbjct: 128 LRQEYRR 134
>sp|Q5TXB2|SLX1_ANOGA Structure-specific endonuclease subunit SLX1 homolog OS=Anopheles
gambiae GN=AGAP002259 PE=3 SV=3
Length = 273
Score = 175 bits (443), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 81/132 (61%), Positives = 103/132 (78%), Gaps = 5/132 (3%)
Query: 3 FHGVYLLYSR--NPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F+GVYLL S+ NP++ GRTYIGYTVDP+RRIKQHN+G+D GGA +TSNRGPW MVLIV+
Sbjct: 10 FYGVYLLVSKSPNPKFAGRTYIGYTVDPNRRIKQHNRGEDAGGARRTSNRGPWTMVLIVH 69
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQ---HVARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFPN+ISALRFEWAWQ P++SRRL+ + +K KE+ + Y R+L ML+ PW RLP
Sbjct: 70 GFPNNISALRFEWAWQQPRVSRRLKQMPELQKKLRKESNFEYNFRILTEMLRMGPWNRLP 129
Query: 118 LTVQWLKPEYQQ 129
L V+W E+ +
Sbjct: 130 LVVRWFADEFHR 141
>sp|Q5PQP5|SLX1_RAT Structure-specific endonuclease subunit SLX1 OS=Rattus norvegicus
GN=Slx1b PE=2 SV=1
Length = 271
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 76/130 (58%), Positives = 102/130 (78%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY +NPR+ GR Y+G+TV+P RR++QHN G+ GGA +TS RGPWDMVLI++GF
Sbjct: 10 FFGVYLLYCQNPRHRGRVYVGFTVNPARRVRQHNAGRKKGGAWRTSGRGPWDMVLILHGF 69
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P+ ++ALRFEWAWQHP+ SRRL HV + E ++T+ LR+L ML+ PW RLPLTV+W
Sbjct: 70 PSAVAALRFEWAWQHPQASRRLTHVGPRLRSEASFTFHLRVLAHMLRVPPWVRLPLTVRW 129
Query: 123 LKPEYQQVLT 132
L+P+++ L
Sbjct: 130 LRPDFRHELC 139
>sp|Q32PI0|SLX1_BOVIN Structure-specific endonuclease subunit SLX1 OS=Bos taurus GN=SLX1A
PE=2 SV=1
Length = 267
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 101/131 (77%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYG 61
F GVYLLY NPR+ GR Y+G+TV+P RR++QHN G+ GGA +TS RGPW+MVLIV+G
Sbjct: 5 CFFGVYLLYCLNPRHRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGRGPWEMVLIVHG 64
Query: 62 FPNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQ 121
FP+ ++ALRFEWAWQHP+ SRRL HV R+ E T+ + LR+L ML+ PW RLPLT++
Sbjct: 65 FPSAVAALRFEWAWQHPQASRRLTHVGRRLRGEATFAFHLRVLAHMLRAPPWVRLPLTLR 124
Query: 122 WLKPEYQQVLT 132
WL+ +++Q L
Sbjct: 125 WLRADFRQDLC 135
>sp|Q8BX32|SLX1_MOUSE Structure-specific endonuclease subunit SLX1 OS=Mus musculus
GN=Slx1b PE=2 SV=1
Length = 270
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 100/130 (76%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY +NPR+ GR Y+G+TV+P RR++QHN G+ GGA +TS RGPWDMVLI++GF
Sbjct: 10 FFGVYLLYCQNPRHRGRVYVGFTVNPARRVRQHNAGRKKGGAWRTSGRGPWDMVLIIHGF 69
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P+ ++ALRFEWAWQHP+ SRRL HV + E + + LR+L ML+ PW RLPLT++W
Sbjct: 70 PSAVAALRFEWAWQHPQASRRLTHVGPRLRSEAAFAFHLRVLAHMLRVPPWVRLPLTLRW 129
Query: 123 LKPEYQQVLT 132
L+P+++ L
Sbjct: 130 LRPDFRHELC 139
>sp|A7STV9|SLX1_NEMVE Structure-specific endonuclease subunit SLX1 homolog
OS=Nematostella vectensis GN=v1g174298 PE=3 SV=1
Length = 270
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 78/127 (61%), Positives = 98/127 (77%), Gaps = 1/127 (0%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
FHGVYLLY NP++ G TYIGYTV+P+RRIKQHN G D GGA+KTS + PW+M+LIV+GF
Sbjct: 10 FHGVYLLYCVNPKFKGHTYIGYTVNPNRRIKQHNGGVDKGGAYKTSRKKPWNMILIVHGF 69
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVA-RKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQ 121
PNDI AL+FEWAWQ P +SRRL+ A +KK +E YC R+L +L+ PW RLPL ++
Sbjct: 70 PNDIIALQFEWAWQKPTVSRRLKSAATKKKPRERPVQYCFRILSELLRVGPWNRLPLHIR 129
Query: 122 WLKPEYQ 128
WL EY+
Sbjct: 130 WLMREYE 136
>sp|Q9BQ83|SLX1_HUMAN Structure-specific endonuclease subunit SLX1 OS=Homo sapiens
GN=SLX1A PE=1 SV=1
Length = 275
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 98/130 (75%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F GVYLLY NPRY GR Y+G+TV+ RR++QHN G+ GGA +TS RGPW+MVL+V+GF
Sbjct: 13 FFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVHGF 72
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P+ ++ALRFEWAWQHP SRRL HV + ET + + LR+L ML+ PW RLPLT++W
Sbjct: 73 PSSVAALRFEWAWQHPHASRRLAHVGPRLRGETAFAFHLRVLAHMLRAPPWARLPLTLRW 132
Query: 123 LKPEYQQVLT 132
++P+ +Q L
Sbjct: 133 VRPDLRQDLC 142
>sp|B5DXG8|SLX1_DROPS Structure-specific endonuclease subunit SLX1 homolog OS=Drosophila
pseudoobscura pseudoobscura GN=slx1 PE=3 SV=1
Length = 291
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 75/134 (55%), Positives = 100/134 (74%), Gaps = 5/134 (3%)
Query: 3 FHGVYLLYSR--NPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F+GVYLL S+ + RY + Y+G+TV+P RRIKQHN+G DFGGA KTS +GPW MV+IV+
Sbjct: 16 FYGVYLLCSQSLDSRYRAKCYVGFTVNPKRRIKQHNRGCDFGGAKKTSKKGPWQMVMIVH 75
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQ---HVARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFPN+ISAL+FEWAWQ P +S RL+ + RKK KET + Y R+L+ ML PW RL
Sbjct: 76 GFPNNISALQFEWAWQQPTLSTRLKIFPDLKRKKPKETHFDYNFRILNRMLSVGPWHRLA 135
Query: 118 LTVQWLKPEYQQVL 131
LT++WL+ +Y++
Sbjct: 136 LTIRWLETDYERAF 149
>sp|B4JGW7|SLX1_DROGR Structure-specific endonuclease subunit SLX1 homolog OS=Drosophila
grimshawi GN=slx1 PE=3 SV=1
Length = 286
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 74/132 (56%), Positives = 101/132 (76%), Gaps = 5/132 (3%)
Query: 3 FHGVYLLYSR--NPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F+GVYLL S+ + RY G+ Y+G+TV+P RRI QHN+G DFGGAHKTS +GPW MV+IV+
Sbjct: 17 FYGVYLLCSQSLDARYRGKCYVGFTVNPKRRIGQHNRGCDFGGAHKTSRKGPWQMVMIVH 76
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQ---HVARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFPN+I+AL+FEWAWQ P +S RL+ + RK+ +ET + Y R+++ ML PW RLP
Sbjct: 77 GFPNNIAALQFEWAWQQPALSTRLKCYPELRRKQPRETHFDYNFRIVNRMLGIGPWHRLP 136
Query: 118 LTVQWLKPEYQQ 129
LTV+WL+ E ++
Sbjct: 137 LTVRWLESECER 148
>sp|A8PV03|SLX1_BRUMA Structure-specific endonuclease subunit SLX1 homolog OS=Brugia
malayi GN=Bm1_35165 PE=3 SV=1
Length = 333
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 76/129 (58%), Positives = 99/129 (76%), Gaps = 3/129 (2%)
Query: 3 FHGVYLLYSRNP-RYL-GRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F GVY L SR+P RY R YIGYTV+P+RRI+QHN GK+FGGA KT +RGPWDMV I++
Sbjct: 69 FFGVYCLLSRSPNRYFKNRCYIGYTVNPNRRIRQHNAGKEFGGAKKTDHRGPWDMVCIIH 128
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQHVA-RKKSKETTYTYCLRLLHIMLQTAPWQRLPLT 119
GFPN +SALRFEWAWQ+P+ SRRL+ + +K++ ET + + LR+ ML + PW+RL LT
Sbjct: 129 GFPNSVSALRFEWAWQNPEKSRRLRLLNLKKRTSETAFGFRLRIACHMLNSDPWRRLSLT 188
Query: 120 VQWLKPEYQ 128
+WL PE +
Sbjct: 189 FRWLLPELE 197
>sp|B4GEU1|SLX1_DROPE Structure-specific endonuclease subunit SLX1 homolog OS=Drosophila
persimilis GN=slx1 PE=3 SV=1
Length = 291
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/134 (55%), Positives = 100/134 (74%), Gaps = 5/134 (3%)
Query: 3 FHGVYLLYSR--NPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F+GVYLL S+ + RY + Y+G+TV+P RRIKQHN+G DFGGA KTS +GPW MV+IV+
Sbjct: 16 FYGVYLLCSQSLDSRYRAKCYVGFTVNPKRRIKQHNRGCDFGGAKKTSKKGPWQMVMIVH 75
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQ---HVARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFPN+ISAL+FEWAWQ P +S RL+ + RKK KET + Y R+L+ ML PW RL
Sbjct: 76 GFPNNISALQFEWAWQQPTLSTRLKIFPDLKRKKPKETHFDYNFRILNRMLGVGPWHRLA 135
Query: 118 LTVQWLKPEYQQVL 131
LT++WL+ +Y++
Sbjct: 136 LTIRWLETDYERAF 149
>sp|Q9VN41|SLX1_DROME Structure-specific endonuclease subunit SLX1 homolog OS=Drosophila
melanogaster GN=slx1 PE=1 SV=3
Length = 297
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 74/136 (54%), Positives = 100/136 (73%), Gaps = 5/136 (3%)
Query: 3 FHGVYLLYSR--NPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F+GVYLL S+ +PRY G+ Y+G+TV+P RRI+QHN G DFGGA KTS +GPW MV+IV+
Sbjct: 23 FYGVYLLCSQSLDPRYRGKCYVGFTVNPKRRIRQHNLGCDFGGARKTSRKGPWLMVMIVH 82
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQ---HVARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFPN+ AL+FEWAWQ P +S RL+ + RK +ET + Y R+L ML PW RLP
Sbjct: 83 GFPNNTVALQFEWAWQQPSLSTRLKMYPELKRKLPRETFFDYNFRILSNMLGVGPWNRLP 142
Query: 118 LTVQWLKPEYQQVLTE 133
LTV+WL+ +Y++ ++
Sbjct: 143 LTVRWLETDYERPFSK 158
>sp|B4I3R2|SLX1_DROSE Structure-specific endonuclease subunit SLX1 homolog OS=Drosophila
sechellia GN=slx1 PE=3 SV=2
Length = 298
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 74/136 (54%), Positives = 100/136 (73%), Gaps = 5/136 (3%)
Query: 3 FHGVYLLYSR--NPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F+GVYLL S+ +PRY G+ Y+G+TV+P RRI+QHN G DFGGA KTS +GPW MV+IV+
Sbjct: 23 FYGVYLLCSQSLDPRYRGKCYVGFTVNPKRRIRQHNLGCDFGGARKTSRKGPWLMVMIVH 82
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQ---HVARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFPN+ AL+FEWAWQ P +S RL+ + RK +ET + Y R+L ML PW RLP
Sbjct: 83 GFPNNTVALQFEWAWQQPSLSTRLKMYPELKRKLPRETFFDYNFRILSHMLGVGPWNRLP 142
Query: 118 LTVQWLKPEYQQVLTE 133
LTV+WL+ +Y++ ++
Sbjct: 143 LTVRWLETDYERPFSK 158
>sp|B3P230|SLX1_DROER Structure-specific endonuclease subunit SLX1 homolog OS=Drosophila
erecta GN=slx1 PE=3 SV=2
Length = 294
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 73/132 (55%), Positives = 98/132 (74%), Gaps = 5/132 (3%)
Query: 3 FHGVYLLYSR--NPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F+GVYLL S+ +PR+ G+ Y+G+TV+P RRI+QHN G DFGGA KTS RGPW MV+IV+
Sbjct: 24 FYGVYLLCSQSLDPRFRGKCYVGFTVNPKRRIRQHNLGCDFGGARKTSRRGPWLMVMIVH 83
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQ---HVARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFPN+ AL+FEWAWQ P +S RL+ + RK +ET + Y R+L ML PW RLP
Sbjct: 84 GFPNNTVALQFEWAWQQPSLSTRLKMYPELKRKLPRETFFDYNFRILSHMLGVGPWNRLP 143
Query: 118 LTVQWLKPEYQQ 129
L+V+WL+ +Y++
Sbjct: 144 LSVRWLETDYER 155
>sp|B3M0F3|SLX1_DROAN Structure-specific endonuclease subunit SLX1 homolog OS=Drosophila
ananassae GN=slx1 PE=3 SV=1
Length = 299
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 71/132 (53%), Positives = 98/132 (74%), Gaps = 5/132 (3%)
Query: 3 FHGVYLLYSR--NPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F+GVYLL S+ + RY G+ Y+G+TV+P RRIKQHN+G DFGGA KTS +GPW MV+IV+
Sbjct: 24 FYGVYLLCSQSLDSRYRGKCYVGFTVNPKRRIKQHNRGCDFGGAKKTSRKGPWQMVMIVH 83
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQ---HVARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFPN+I AL+FEWAWQ P +S RL+ + RK +E+ + Y R+L+ ML PW RL
Sbjct: 84 GFPNNIVALQFEWAWQQPTLSTRLKIFPELKRKNPRESHFDYNFRILNRMLGVGPWNRLA 143
Query: 118 LTVQWLKPEYQQ 129
L ++WL+ +Y++
Sbjct: 144 LKIRWLETDYER 155
>sp|B4KBJ0|SLX1_DROMO Structure-specific endonuclease subunit SLX1 homolog OS=Drosophila
mojavensis GN=slx1 PE=3 SV=1
Length = 303
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 71/132 (53%), Positives = 98/132 (74%), Gaps = 5/132 (3%)
Query: 3 FHGVYLLYSR--NPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F+GVYLL S+ + R+ G+ Y+G+TV+P RRI+QHN+G FGGA KTS +GPW MV+IV+
Sbjct: 21 FYGVYLLCSQSVDVRHRGKCYVGFTVNPKRRIRQHNRGSSFGGAKKTSKKGPWQMVMIVH 80
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQ---HVARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFPN I AL+FEWAWQ P +S RL+ + RK +ET + Y R+++ ML PW RLP
Sbjct: 81 GFPNKIVALQFEWAWQQPTLSTRLKIFDDLRRKLPRETHFDYNFRIVNRMLGVGPWHRLP 140
Query: 118 LTVQWLKPEYQQ 129
LTV+WL+ +Y++
Sbjct: 141 LTVRWLETDYER 152
>sp|P91351|SLX1_CAEEL Structure-specific endonuclease subunit SLX1 homolog
OS=Caenorhabditis elegans GN=giyd-1 PE=3 SV=1
Length = 443
Score = 141 bits (355), Expect = 1e-33, Method: Composition-based stats.
Identities = 66/124 (53%), Positives = 89/124 (71%), Gaps = 3/124 (2%)
Query: 3 FHGVYLLYSRNPR--YLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F+GVY L SR+ R Y R YIGYTVDP+RRI QHN G+D GGA KT +RGPWDMV +V+
Sbjct: 172 FYGVYCLISRSDRPCYKNRCYIGYTVDPNRRIMQHNGGRDKGGAKKTDSRGPWDMVCVVH 231
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQHVA-RKKSKETTYTYCLRLLHIMLQTAPWQRLPLT 119
GFPN ++AL FEWAWQ+P +S+ L+ RK+ KET + + LR+ ++ ++ + R LT
Sbjct: 232 GFPNHVAALHFEWAWQNPLVSKSLKEKQLRKERKETPFAFQLRIACELMNSSAFCRFALT 291
Query: 120 VQWL 123
+WL
Sbjct: 292 FRWL 295
>sp|A8WJ66|SLX1_CAEBR Structure-specific endonuclease subunit SLX1 homolog
OS=Caenorhabditis briggsae GN=giyd-1 PE=3 SV=2
Length = 439
Score = 140 bits (352), Expect = 3e-33, Method: Composition-based stats.
Identities = 67/124 (54%), Positives = 87/124 (70%), Gaps = 3/124 (2%)
Query: 3 FHGVYLLYSRNPR--YLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVY 60
F+GVY L SR+ R Y R YIGYTVDP+RRI QHN G+ GGA KT +RGPWDMV +V+
Sbjct: 167 FYGVYCLISRSERQCYKNRCYIGYTVDPNRRIMQHNGGRFKGGAKKTDSRGPWDMVCVVH 226
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQHVARKKS-KETTYTYCLRLLHIMLQTAPWQRLPLT 119
GFPN ++ALRFEWAWQ+P +S+ L+ KK KET + Y LR+ ++ + + R LT
Sbjct: 227 GFPNHVAALRFEWAWQNPAVSKSLKEKQLKKERKETPFAYQLRIACELMNSEAFSRFALT 286
Query: 120 VQWL 123
+WL
Sbjct: 287 FRWL 290
>sp|A9V196|SLX1_MONBE Structure-specific endonuclease subunit SLX1 homolog OS=Monosiga
brevicollis GN=8836 PE=3 SV=1
Length = 420
Score = 115 bits (289), Expect = 6e-26, Method: Composition-based stats.
Identities = 56/121 (46%), Positives = 72/121 (59%), Gaps = 5/121 (4%)
Query: 11 SRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGFPNDISALR 70
++N + LG IG+T DP RR++QHN G T +G WDM IVYGFPN ++ALR
Sbjct: 32 TQNTKLLGLQDIGFTTDPVRRLRQHNSEIGGGAVRTTRAKGSWDMAAIVYGFPNKVAALR 91
Query: 71 FEWAWQHPKMSRRLQHVAR-----KKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQWLKP 125
FEWAWQHP SRRL+ R ++ + T L L ML T PW PLT+ WL+P
Sbjct: 92 FEWAWQHPLKSRRLRDAVRSDLPASRAAQMQLTAKLHTLAAMLYTVPWSDQPLTLCWLQP 151
Query: 126 E 126
+
Sbjct: 152 D 152
>sp|A4I1H7|SLX1_LEIIN Structure-specific endonuclease subunit SLX1 homolog OS=Leishmania
infantum GN=LinJ25.1380 PE=3 SV=1
Length = 705
Score = 110 bits (276), Expect = 2e-24, Method: Composition-based stats.
Identities = 56/120 (46%), Positives = 77/120 (64%), Gaps = 2/120 (1%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG-PWDMVLIVYG 61
FH VYLL S +P+ G YIGYTV+P RR++QHN G+ GA +TS RG PW +V V G
Sbjct: 5 FHCVYLLTSLDPQCEGDFYIGYTVNPLRRLRQHN-GELVNGARRTSRRGRPWTIVCCVSG 63
Query: 62 FPNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQ 121
FP+D +AL+FEW WQHP S RL+H + Y + LH++++ + + RL LT+
Sbjct: 64 FPDDRAALKFEWCWQHPTASARLRHAIDILTGLRRLPYAVATLHLLVRASLFCRLDLTLH 123
>sp|Q4CTY5|SLX12_TRYCC Structure-specific endonuclease subunit SLX1 homolog 2
OS=Trypanosoma cruzi (strain CL Brener)
GN=Tc00.1047053511881.30 PE=3 SV=1
Length = 530
Score = 108 bits (269), Expect = 1e-23, Method: Composition-based stats.
Identities = 56/126 (44%), Positives = 77/126 (61%), Gaps = 2/126 (1%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG-PWDMVLIVYG 61
FH VYLL S +P+ G YIGYTVDP RR++QHN G+ GA +T RG PW+++ V G
Sbjct: 5 FHCVYLLTSLDPQCAGEYYIGYTVDPIRRLRQHN-GEIVSGAWRTKRRGRPWELLCCVSG 63
Query: 62 FPNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQ 121
F D AL+FEW WQHP S RL+ + Y + +LH++L+ + RL LT+
Sbjct: 64 FGEDRIALKFEWCWQHPTKSTRLKTQMTQLRGVHRLPYAVGVLHLLLRADLFARLQLTLH 123
Query: 122 WLKPEY 127
+PE+
Sbjct: 124 IFEPEH 129
>sp|Q4D7L5|SLX11_TRYCC Structure-specific endonuclease subunit SLX1 homolog 1
OS=Trypanosoma cruzi (strain CL Brener)
GN=Tc00.1047053509453.60 PE=3 SV=1
Length = 529
Score = 107 bits (267), Expect = 2e-23, Method: Composition-based stats.
Identities = 56/125 (44%), Positives = 76/125 (60%), Gaps = 2/125 (1%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG-PWDMVLIVYG 61
FH VYLL S +P+ G YIGYTVDP RR++QHN G+ GA +T RG PW+++ V G
Sbjct: 5 FHCVYLLTSLDPQCAGEYYIGYTVDPIRRLRQHN-GEIVSGAWRTKRRGRPWELLCCVSG 63
Query: 62 FPNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQ 121
F D AL+FEW WQHP S RL+ + Y + +LH++L+ + RL LT+
Sbjct: 64 FGEDRIALKFEWCWQHPTKSTRLKTQMTQLRGVHRLPYAVGVLHLLLRADLFARLQLTLH 123
Query: 122 WLKPE 126
+PE
Sbjct: 124 IFEPE 128
>sp|Q9P7M3|SLX1_SCHPO Structure-specific endonuclease subunit slx1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=slx1 PE=1 SV=1
Length = 271
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 74/121 (61%), Gaps = 1/121 (0%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+ YLL S + G YIG T DP RR++QHN G+ GGA KT + PW + +VYGF
Sbjct: 6 FYCCYLLKSNRTQSSGAVYIGSTPDPPRRLRQHN-GEIVGGASKTKHGRPWSISCLVYGF 64
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
PN +SAL+FEW WQ+ +SR + + K+ T YCL+ L ++ + W+R PL + +
Sbjct: 65 PNKVSALKFEWNWQNLGISRYTKDCDFRSKKQKTIMYCLKGLKHLVDSDTWRRWPLNITF 124
Query: 123 L 123
L
Sbjct: 125 L 125
>sp|P0CN80|SLX1_CRYNJ Structure-specific endonuclease subunit SLX1 OS=Cryptococcus
neoformans var. neoformans serotype D (strain JEC21 /
ATCC MYA-565) GN=SLX1 PE=3 SV=1
Length = 487
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 78/133 (58%), Gaps = 10/133 (7%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+ YLL S+ RTY+G T DP RRI+QHN G+ GA TS PW+M +IVYGF
Sbjct: 28 FYACYLLRSKATANSNRTYVGSTPDPPRRIRQHN-GELKQGAWSTSRHRPWEMQMIVYGF 86
Query: 63 PNDISALRFEWAWQHPKMSRRLQ---------HVARKKSKETTYTYCLRLLHIMLQTAPW 113
P+ ++AL+FEWAWQ P++SR L+ H+ K ++ + + + ++ P+
Sbjct: 87 PSKLAALQFEWAWQKPELSRHLRIRGEDQEYYHIFTKDARRNWVERKVCVAYALISLTPF 146
Query: 114 QRLPLTVQWLKPE 126
RLPL V++ E
Sbjct: 147 NRLPLHVRFFNHE 159
>sp|P0CN81|SLX1_CRYNB Structure-specific endonuclease subunit SLX1 OS=Cryptococcus
neoformans var. neoformans serotype D (strain B-3501A)
GN=SLX1 PE=3 SV=1
Length = 487
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 78/133 (58%), Gaps = 10/133 (7%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+ YLL S+ RTY+G T DP RRI+QHN G+ GA TS PW+M +IVYGF
Sbjct: 28 FYACYLLRSKATANSNRTYVGSTPDPPRRIRQHN-GELKQGAWSTSRHRPWEMQMIVYGF 86
Query: 63 PNDISALRFEWAWQHPKMSRRLQ---------HVARKKSKETTYTYCLRLLHIMLQTAPW 113
P+ ++AL+FEWAWQ P++SR L+ H+ K ++ + + + ++ P+
Sbjct: 87 PSKLAALQFEWAWQKPELSRHLRIRGEDQEYYHIFTKDARRNWVERKVCVAYALISLTPF 146
Query: 114 QRLPLTVQWLKPE 126
RLPL V++ E
Sbjct: 147 NRLPLHVRFFNHE 159
>sp|Q4Q9W0|SLX1_LEIMA Structure-specific endonuclease subunit SLX1 homolog OS=Leishmania
major GN=LmjF25.1330 PE=3 SV=1
Length = 704
Score = 96.7 bits (239), Expect = 3e-20, Method: Composition-based stats.
Identities = 49/127 (38%), Positives = 72/127 (56%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
FH VYLL S +P+ G YIGY+V+P RR++QHN G PW +V V GF
Sbjct: 5 FHCVYLLTSLDPQCEGDFYIGYSVNPLRRLRQHNGELVNGARRTGRRGRPWTIVCCVSGF 64
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTVQW 122
P+D +AL+FEW WQHP S RL+H + Y + LH++++ + + +L LT+
Sbjct: 65 PDDRTALKFEWCWQHPTASARLRHTIDILTGLRRLPYAVATLHLLVRASLFCQLDLTLHI 124
Query: 123 LKPEYQQ 129
+ + Q
Sbjct: 125 FESAFLQ 131
>sp|B6JY16|SLX1_SCHJY Structure-specific endonuclease subunit slx1 OS=Schizosaccharomyces
japonicus (strain yFS275 / FY16936) GN=slx1 PE=3 SV=1
Length = 273
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYG 61
+F+ YLL S YIG T DP RR++QHN G+ GGA+KT PW + V+G
Sbjct: 1 MFYCCYLLVSEKAASRS-VYIGSTPDPARRLRQHN-GEIKGGAYKTKRSRPWKVACFVHG 58
Query: 62 FPNDISALRFEWAWQHPKMSRR---LQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPL 118
FP I+AL+FEW WQHP+ +R QH K T C+R L +ML W R L
Sbjct: 59 FPTKIAALQFEWVWQHPQSTRHDDLRQHSRVVSVKRQTLLSCVRALGVMLCCEAWSRWGL 118
Query: 119 TV 120
V
Sbjct: 119 RV 120
>sp|Q57XV5|SLX1_TRYB2 Structure-specific endonuclease subunit SLX1 homolog OS=Trypanosoma
brucei brucei (strain 927/4 GUTat10.1) GN=Tb927.3.1220
PE=3 SV=1
Length = 511
Score = 90.1 bits (222), Expect = 3e-18, Method: Composition-based stats.
Identities = 54/127 (42%), Positives = 79/127 (62%), Gaps = 4/127 (3%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG-PWDMVLIVYG 61
FH VYLL S +P+ G YIGYTV+P RR++QHN G+ GA +T G PW +++ V G
Sbjct: 5 FHCVYLLTSLDPQCEGAHYIGYTVNPIRRLRQHN-GELVNGARRTKRNGRPWLLLMCVSG 63
Query: 62 FPNDISALRFEWAWQHPKMSRRLQ-HVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLTV 120
F D AL+FEW WQ+P S RL+ HV++ + T+ + +L ++L+T + RL LT+
Sbjct: 64 FGEDRIALKFEWCWQNPSKSTRLKSHVSQLRCVH-KLTHAVGVLLLLLRTELFSRLQLTL 122
Query: 121 QWLKPEY 127
E+
Sbjct: 123 HIFDREH 129
>sp|Q5CT62|SLX1_CRYPI Structure-specific endonuclease subunit SLX1 homolog
OS=Cryptosporidium parvum (strain Iowa II) GN=cgd2_4280
PE=3 SV=1
Length = 410
Score = 88.6 bits (218), Expect = 1e-17, Method: Composition-based stats.
Identities = 52/147 (35%), Positives = 75/147 (51%), Gaps = 19/147 (12%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
H Y L S + +YIGY+V+P RR++QHN G+ GA KT + PW++ + V GF
Sbjct: 7 LHYCYFLLSEAKK--KASYIGYSVNPCRRLRQHN-GEIKKGAKKTKSGVPWNLGICVGGF 63
Query: 63 PNDISALRFEWAWQHPKMSRRLQH-------VARKKSKETTYTYCLR---------LLHI 106
P+ ++ALRFEWAWQHP + + + V KK+ E R +L
Sbjct: 64 PDRVAALRFEWAWQHPNICKVTRDNIESWKIVKTKKTSENKRILNKRQWSIQQRVSILLC 123
Query: 107 MLQTAPWQRLPLTVQWLKPEYQQVLTE 133
M PW+ + LTV K E + + E
Sbjct: 124 MTTLEPWKNMNLTVFVFKDELENTIKE 150
>sp|B9WGW9|SLX1_CANDC Structure-specific endonuclease subunit SLX1 OS=Candida
dubliniensis (strain CD36 / ATCC MYA-646 / CBS 7987 /
NCPF 3949 / NRRL Y-17841) GN=SLX1 PE=3 SV=1
Length = 286
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 74/127 (58%), Gaps = 6/127 (4%)
Query: 3 FHGVYLLYS-RNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIV 59
F+GVY+L S PR RTYIG T DP RR++QHN GGA++T G PW MV++V
Sbjct: 16 FYGVYILKSIPKPR---RTYIGSTPDPKRRLRQHNGDLKVGGAYRTKKDGSRPWTMVVLV 72
Query: 60 YGFPNDISALRFEWAWQHPKMSRRLQHVARKKSKETTYTYCLRLLHIMLQTAPWQRLPLT 119
+GFP+ I+AL+FE + QH +R + + AR S + +L +I L T + ++ L
Sbjct: 73 HGFPSRIAALQFEHSLQHAYQTRHINNDARITSSSRQSSMHSKLANIRLLTTSFDKMSLK 132
Query: 120 VQWLKPE 126
+ E
Sbjct: 133 IAIFDEE 139
>sp|A8B2Z8|SLX1_GIAIC Structure-specific endonuclease subunit SLX1 homolog OS=Giardia
intestinalis (strain ATCC 50803 / WB clone C6)
GN=GL50803_16475 PE=3 SV=1
Length = 359
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 71/136 (52%), Gaps = 6/136 (4%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
Y L + + R YIG+T +P RRI+QHN+ K GGA KTS GPW MVL V GF
Sbjct: 10 LFACYCLVAESSESPKRCYIGFTNNPLRRIRQHNR-KIAGGARKTSRYGPWRMVLFVGGF 68
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSK-----ETTYTYCLRLLHIMLQTAPWQRLP 117
+SAL+FE+ W +P SR + ++ K + + L +L +L P+ P
Sbjct: 69 STKVSALKFEYIWTYPTRSRYVNCISATSQKLRLACPRSISTALDVLVTLLIHPPFSLQP 128
Query: 118 LTVQWLKPEYQQVLTE 133
L V L E +V ++
Sbjct: 129 LYVVLLDAEGNRVKSQ 144
>sp|C0NTM8|SLX1_AJECG Structure-specific endonuclease subunit SLX1 OS=Ajellomyces
capsulata (strain G186AR / H82 / ATCC MYA-2454 / RMSCC
2432) GN=SLX1 PE=3 SV=1
Length = 421
Score = 84.3 bits (207), Expect = 2e-16, Method: Composition-based stats.
Identities = 56/152 (36%), Positives = 73/152 (48%), Gaps = 24/152 (15%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
F+ YLL R+ YIG T +P RR+ QHN G GGA KTS+ PW+MV IV
Sbjct: 14 FYCCYLL--RSTVRHASLYIGSTPEPSRRLAQHN-GDRTGGARKTSSEKLRPWEMVAIVS 70
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQ-------------------HVARKKSKETTYTYCL 101
GF N AL+FEWAWQH K SR + V R T+ L
Sbjct: 71 GFTNRAGALQFEWAWQHTKESRHAEVERCESEQLGTRGSSRTGKEVKRAGKPRTSLPNIL 130
Query: 102 RLLHIMLQTAPWQRLPLTVQWLKPEYQQVLTE 133
LHI+L++ + PL V + + QV ++
Sbjct: 131 ENLHILLRSPYFSEWPLEVWFFSADVWQVWSQ 162
>sp|B2WM34|SLX1_PYRTR Structure-specific endonuclease subunit slx1 OS=Pyrenophora
tritici-repentis (strain Pt-1C-BFP) GN=slx1 PE=3 SV=1
Length = 364
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 75/145 (51%), Gaps = 24/145 (16%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIV 59
F+ YLL S+N + YIG T +P RR+ QHN G GGA +TS +G PW+M IV
Sbjct: 14 AFYCCYLLRSKNRKAF---YIGSTPNPARRLGQHN-GSSKGGAKRTSMQGKRPWEMTCIV 69
Query: 60 YGFPNDISALRFEWAWQHPKMSRRLQHVARKKSKET------------------TYTYCL 101
GFP+ +AL+FEWAWQ+ +R ++ R+ K+ + L
Sbjct: 70 TGFPSRFAALQFEWAWQNTHATRHIERDVREARKDELEKGRKNASPVKRSRPPMSLEARL 129
Query: 102 RLLHIMLQTAPWQRLPLTVQWLKPE 126
+ LH +L + R PL V++ P+
Sbjct: 130 KNLHHLLGVGSFSRWPLHVRFFAPD 154
>sp|Q6FML9|SLX1_CANGA Structure-specific endonuclease subunit SLX1 OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=SLX1 PE=3 SV=1
Length = 312
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 78/133 (58%), Gaps = 7/133 (5%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
F+G YLL S + R YIG T +P RR++QHN GGA++T G PW+MV IVY
Sbjct: 10 FYGCYLLQSISKR--QSFYIGSTPNPVRRLRQHNGSLSRGGAYRTKRDGTRPWEMVAIVY 67
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQH---VARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFP+ I+AL+FE AWQH +R ++ V + + + + L ++ +L+ ++ +
Sbjct: 68 GFPSRIAALQFEHAWQHGYQTRYIKSQDRVVKTRKGGRSIHHKLAMITSLLKNEYFRYMD 127
Query: 118 LTVQWLKPEYQQV 130
LT+ + + +++
Sbjct: 128 LTLHFFNQKVEEI 140
>sp|A6RYJ8|SLX1_BOTFB Structure-specific endonuclease subunit slx1 OS=Botryotinia
fuckeliana (strain B05.10) GN=slx1 PE=3 SV=2
Length = 425
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 76/143 (53%), Gaps = 18/143 (12%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTS--NRGPWDMVLIVY 60
F+G YLL R+ Y+G T +P RR++QHN G GGA +TS N PW+M IV
Sbjct: 15 FYGCYLL--RSTIRHSALYVGSTPNPVRRLRQHN-GLVKGGAVRTSRGNLRPWEMACIVT 71
Query: 61 GFPNDISALRFE-WAWQHPKM------SRRLQHVARKKSK------ETTYTYCLRLLHIM 107
GFP I+AL+F+ WAWQ+P + S R+ H +KK T L LHI+
Sbjct: 72 GFPTSIAALQFDRWAWQNPHITLHIPPSSRISHATQKKRSGHPKRPRHTLQSLLSNLHIL 131
Query: 108 LQTAPWQRLPLTVQWLKPEYQQV 130
L + R PL +++ P+ +
Sbjct: 132 LTVPSFSRWPLEIKFFAPDVHRA 154
>sp|Q5AU18|SLX1_EMENI Structure-specific endonuclease subunit slx1 OS=Emericella
nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 /
NRRL 194 / M139) GN=slx1 PE=3 SV=1
Length = 409
Score = 81.3 bits (199), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/79 (50%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
Query: 21 YIGYTVDPDRRIKQHNKGKDFGGAHKTSN--RGPWDMVLIVYGFPNDISALRFEWAWQHP 78
YIG T DP RR+ QHN G GGA +T++ R PW+MV++V GF + I+AL+FEWAWQHP
Sbjct: 11 YIGSTPDPARRLAQHN-GLCKGGARRTADEKRRPWEMVMVVEGFMSKIAALQFEWAWQHP 69
Query: 79 KMSRRLQHVARKKSKETTY 97
+R L A K + T+
Sbjct: 70 AATRHLTADAPSKEQSKTH 88
>sp|Q0UAL6|SLX1_PHANO Structure-specific endonuclease subunit SLX1 OS=Phaeosphaeria
nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173)
GN=SLX1 PE=3 SV=3
Length = 366
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 76/147 (51%), Gaps = 26/147 (17%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIV 59
F+ YLL S+N + YIG T +P RR+ QHN G GGA +TS +G PW+M IV
Sbjct: 14 AFYCCYLLRSKNRKSY---YIGSTPNPARRLGQHN-GSSKGGAKRTSMQGKRPWEMTCIV 69
Query: 60 YGFPNDISALRFEWAWQHPKMSR---------RLQHVARKKSKET-----------TYTY 99
GFP+ +AL+FEWAWQ+ +R R + + + K K T +
Sbjct: 70 TGFPSKFAALQFEWAWQNTHATRHIDKDVRDARAEELQKGKKKATSPGRRRKRPPMSLEA 129
Query: 100 CLRLLHIMLQTAPWQRLPLTVQWLKPE 126
L+ LH +L + R PL +++ P+
Sbjct: 130 RLKNLHHLLSVDSFCRWPLNLRFFAPD 156
>sp|Q4PDF6|SLX1_USTMA Structure-specific endonuclease subunit SLX1 OS=Ustilago maydis
(strain 521 / FGSC 9021) GN=SLX1 PE=3 SV=1
Length = 658
Score = 80.9 bits (198), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/94 (46%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRGPWDMVLIVYGF 62
F+ Y L R+ G TYIG T P RR +QHN G GA+KTS PW+M IVYGF
Sbjct: 13 FYACYFL--RSLSTPGTTYIGSTPAPPRRKRQHN-GHLTQGAYKTSRARPWEMECIVYGF 69
Query: 63 PNDISALRFEWAWQHPKMSRRLQHVARKKSKETT 96
+ I+AL+FEWAW P +SR L+ + + S + T
Sbjct: 70 SSKIAALQFEWAWAKPHLSRHLKFLTTEHSVDGT 103
>sp|P38324|SLX1_YEAST Structure-specific endonuclease subunit SLX1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SLX1 PE=1
SV=1
Length = 304
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 73/124 (58%), Gaps = 7/124 (5%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
F+ YLL S N R Y+G T +P RR++QHN GGA++T G PW+M++IV
Sbjct: 13 FYCCYLLQSINKRQ--SFYVGSTPNPVRRLRQHNGKLAVGGAYRTKRDGSRPWEMIMIVR 70
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQH---VARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFP+ I+AL+FE AWQH + + V + K+ T + + L+ ++L+ +QR+
Sbjct: 71 GFPSKIAALQFEHAWQHGYQTHYIAEKDRVVKHKAGGRTLHHKVALMKLLLKHEFFQRMN 130
Query: 118 LTVQ 121
L V+
Sbjct: 131 LIVE 134
>sp|A6ZLG6|SLX1_YEAS7 Structure-specific endonuclease subunit SLX1 OS=Saccharomyces
cerevisiae (strain YJM789) GN=SLX1 PE=3 SV=1
Length = 304
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 73/124 (58%), Gaps = 7/124 (5%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
F+ YLL S N R Y+G T +P RR++QHN GGA++T G PW+M++IV
Sbjct: 13 FYCCYLLQSINKRQ--SFYVGSTPNPVRRLRQHNGKLAVGGAYRTKRDGSRPWEMIMIVR 70
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQH---VARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFP+ I+AL+FE AWQH + + V + K+ T + + L+ ++L+ +QR+
Sbjct: 71 GFPSKIAALQFEHAWQHGYQTHYIAEKDRVVKHKAGGRTLHHKVALMKLLLKHEFFQRMN 130
Query: 118 LTVQ 121
L V+
Sbjct: 131 LIVE 134
>sp|Q6BWW4|SLX1_DEBHA Structure-specific endonuclease subunit SLX1 OS=Debaryomyces
hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
0083 / IGC 2968) GN=SLX1 PE=3 SV=2
Length = 346
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 74/130 (56%), Gaps = 9/130 (6%)
Query: 3 FHGVYLLYSR-NPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIV 59
F+GVYLL S P+ YIG T +P RR++QHN GGA++T G PW+M+ +V
Sbjct: 23 FYGVYLLRSVPKPKSF---YIGSTPNPQRRLRQHNGELKNGGAYRTKKSGFRPWEMICLV 79
Query: 60 YGFPNDISALRFEWAWQHPKMSRRLQH---VARKKSKETTYTYCLRLLHIMLQTAPWQRL 116
Y FP+ AL+FE A QHP +R ++ + K++ T + L + ++L ++ + R+
Sbjct: 80 YNFPSKNVALQFEHALQHPYQTRHIKSELRITHKRNSGNTLHHKLGNIRLLLGSSFFSRM 139
Query: 117 PLTVQWLKPE 126
L V PE
Sbjct: 140 GLKVLLFDPE 149
>sp|A3LZG5|SLX1_PICST Structure-specific endonuclease subunit SLX1 OS=Scheffersomyces
stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 /
NRRL Y-11545) GN=SLX1 PE=3 SV=2
Length = 336
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 76/123 (61%), Gaps = 7/123 (5%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
F+GVYLL S P+ YIG T DP RR++QHN GGA++T G PW M+L+VY
Sbjct: 22 FYGVYLLQSE-PKP-SSFYIGSTPDPPRRLRQHNGDLKAGGAYRTKRAGFRPWRMLLVVY 79
Query: 61 GFPNDISALRFEWAWQHPKMSRRL---QHVARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
FP+ +SAL+FE ++QH +R + + +++ K T + + + ++L+++ ++ LP
Sbjct: 80 DFPSKVSALQFEHSFQHCHETRHIKQEERISKNKLSGRTLHHKVANVALLLRSSYFRHLP 139
Query: 118 LTV 120
L V
Sbjct: 140 LKV 142
>sp|B5VEH8|SLX1_YEAS6 Structure-specific endonuclease subunit SLX1 OS=Saccharomyces
cerevisiae (strain AWRI1631) GN=SLX1 PE=3 SV=1
Length = 304
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 72/123 (58%), Gaps = 7/123 (5%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
F+ YLL S N R Y+G T +P RR++QHN GGA++T G PW+M++IV
Sbjct: 13 FYCCYLLQSINKRQ--SFYVGSTPNPVRRLRQHNGKLAVGGAYRTKRDGSRPWEMIMIVR 70
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQH---VARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFP+ I+AL+FE AWQH + + V + K+ T + + L+ ++L+ +QR+
Sbjct: 71 GFPSKIAALQFEHAWQHGYQTHYIAEKDRVVKHKAGGRTLHHKVALMKLLLKHEFFQRMN 130
Query: 118 LTV 120
L V
Sbjct: 131 LIV 133
>sp|B3LMT5|SLX1_YEAS1 Structure-specific endonuclease subunit SLX1 OS=Saccharomyces
cerevisiae (strain RM11-1a) GN=SLX1 PE=3 SV=1
Length = 304
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 72/123 (58%), Gaps = 7/123 (5%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLIVY 60
F+ YLL S N R Y+G T +P RR++QHN GGA++T G PW+M++IV
Sbjct: 13 FYCCYLLQSINKRQ--SFYVGSTPNPVRRLRQHNGKLAVGGAYRTKRDGSRPWEMIMIVR 70
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQH---VARKKSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFP+ I+AL+FE AWQH + + V + K+ T + + L+ ++L+ +QR+
Sbjct: 71 GFPSKIAALQFEHAWQHGYQTHYIAEKDRVVKHKAGGRTLHHKVALMKLLLKHEFFQRMN 130
Query: 118 LTV 120
L V
Sbjct: 131 LIV 133
>sp|Q0CE14|SLX1_ASPTN Structure-specific endonuclease subunit slx1 OS=Aspergillus terreus
(strain NIH 2624 / FGSC A1156) GN=slx1 PE=3 SV=1
Length = 390
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 76/135 (56%), Gaps = 9/135 (6%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG-PWDMVLIVY 60
++ YLL S + G Y+G T +P RR+ QHN G GGA KT+ + PW+MVL+V
Sbjct: 14 AYYCCYLLRSTVNKRAG-LYVGSTPNPPRRLPQHN-GLSKGGAKKTATKNRPWEMVLLVE 71
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQ-----HVARKKSKETTYTYCLRLLHIMLQTAPWQR 115
GF + +AL+FEWAWQH + SR + + R++ + T L LH +LQ+ + R
Sbjct: 72 GFMSRTAALQFEWAWQH-EDSRHMSKGEPGNTKRRQRPRRSLTANLEKLHSLLQSPCFSR 130
Query: 116 LPLTVQWLKPEYQQV 130
PL ++ + Q+
Sbjct: 131 WPLNIRIFASDVYQL 145
>sp|A2QUJ2|SLX1_ASPNC Structure-specific endonuclease subunit slx1 OS=Aspergillus niger
(strain CBS 513.88 / FGSC A1513) GN=slx1 PE=3 SV=1
Length = 424
Score = 78.6 bits (192), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/90 (47%), Positives = 58/90 (64%), Gaps = 7/90 (7%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTS--NRGPWDMVLIVY 60
++ YLL S R YIG T P RR+ QHN G+ GGA KT+ ++ PW+MVL+V
Sbjct: 15 YYCCYLLRSTKQR--TSLYIGSTPHPARRLAQHN-GESKGGARKTAKDDKRPWEMVLLVE 71
Query: 61 GFPNDISALRFEWAWQHPKMSRRLQHVARK 90
GF + + AL+FEWAWQ+P+MS QH A +
Sbjct: 72 GFTSRVGALQFEWAWQNPRMSS--QHPANR 99
>sp|C1H0K4|SLX1_PARBA Structure-specific endonuclease subunit SLX1 OS=Paracoccidioides
brasiliensis (strain ATCC MYA-826 / Pb01) GN=SLX1 PE=3
SV=2
Length = 392
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 75/150 (50%), Gaps = 24/150 (16%)
Query: 2 VFHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKT--SNRGPWDMVLIV 59
F YLL R+ YIG T DP RR+ QHN G +G A +T N PW+MV IV
Sbjct: 23 AFSCCYLL--RSCVRHASLYIGSTPDPARRLAQHN-GDRYGAAKRTLRENLRPWEMVAIV 79
Query: 60 YGFPNDISALRFEWAWQHPKMSRR-------------------LQHVARKKSKETTYTYC 100
GF + ++AL+FEWAWQ+ K+SR + V R T+ T
Sbjct: 80 SGFTSRVAALQFEWAWQNTKVSRHADLDGNATQELGVRICPRTAKEVKRVAKPRTSLTNI 139
Query: 101 LRLLHIMLQTAPWQRLPLTVQWLKPEYQQV 130
L LH++L++ + + P+ V++ + +V
Sbjct: 140 LANLHLLLRSPYFSKWPIEVRFFSADVHRV 169
>sp|Q6C0W7|SLX1_YARLI Structure-specific endonuclease subunit SLX1 OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=SLX1 PE=3 SV=1
Length = 288
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 74/127 (58%), Gaps = 7/127 (5%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKT--SNRGPWDMVLIVY 60
F+GVYLL S Y+G T +P RRI+QHN GGA +T ++ PW MVLIV
Sbjct: 8 FYGVYLLQSTKKPL--SCYVGSTPNPFRRIRQHNGDLKAGGAWRTKRAHLRPWSMVLIVN 65
Query: 61 GFPNDISALRFEWAWQHPKMSRRL--QHVARK-KSKETTYTYCLRLLHIMLQTAPWQRLP 117
GFP+ ISAL+FE A QHP M+R + + + RK K L + ++++ + ++R+
Sbjct: 66 GFPSKISALKFEHALQHPNMTRLITTKDIKRKVPQKARALGTHLAFIRLLVRCSYFRRMH 125
Query: 118 LTVQWLK 124
L + + +
Sbjct: 126 LRITFFR 132
>sp|C0S8C7|SLX1_PARBP Structure-specific endonuclease subunit SLX1 OS=Paracoccidioides
brasiliensis (strain Pb03) GN=SLX1 PE=3 SV=1
Length = 423
Score = 76.3 bits (186), Expect = 6e-14, Method: Composition-based stats.
Identities = 49/149 (32%), Positives = 75/149 (50%), Gaps = 24/149 (16%)
Query: 3 FHGVYLLYSRNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKT--SNRGPWDMVLIVY 60
F+ YLL R+ YIG T DP RR+ QHN ++ G A +T N PW+MV IV
Sbjct: 24 FYCCYLL--RSCVRHASLYIGSTPDPARRLAQHNGDRN-GAAKRTLRENLRPWEMVAIVS 80
Query: 61 GFPNDISALRFEWAWQHPKMSRRL-------------------QHVARKKSKETTYTYCL 101
GF + ++AL+FEWAWQ+ K+SR + V T+ T L
Sbjct: 81 GFTSRVAALQFEWAWQNTKVSRHADLDGNAIQELGVRICPRTGKGVKGTAKPRTSLTNIL 140
Query: 102 RLLHIMLQTAPWQRLPLTVQWLKPEYQQV 130
LH++L++ + + P+ V++ + +V
Sbjct: 141 ANLHLLLRSPYFSKWPVEVRFFSADVHRV 169
>sp|B8MDD1|SLX1_TALSN Structure-specific endonuclease subunit slx1 OS=Talaromyces
stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 /
NRRL 1006) GN=slx1 PE=3 SV=1
Length = 389
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 74/142 (52%), Gaps = 21/142 (14%)
Query: 2 VFHGVYLLYS-RNPRYLGRTYIGYTVDPDRRIKQHNKGKDFGGAHKTSNRG--PWDMVLI 58
F+ YLL S + P L YIG T DP RR++QHN G GGA +T PW+MV I
Sbjct: 17 AFYCCYLLRSAKRPSAL---YIGSTPDPARRLEQHN-GFAKGGAKRTERNTLRPWEMVAI 72
Query: 59 VYGFPNDISALRFEWAWQHPKMSRRLQHVA-----RKKSKE---------TTYTYCLRLL 104
V GFP+ AL+FEW+WQH +R + V RK+ T+ L L
Sbjct: 73 VEGFPSRTGALQFEWSWQHVHTTRHIGAVETDQLNRKRKNPPTDKGSGIWTSTPKVLGNL 132
Query: 105 HIMLQTAPWQRLPLTVQWLKPE 126
H +L++ + PLTV++L E
Sbjct: 133 HQLLRSTYFGTWPLTVRFLSSE 154
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.139 0.460
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,757,297
Number of Sequences: 539616
Number of extensions: 2083272
Number of successful extensions: 4763
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 4601
Number of HSP's gapped (non-prelim): 157
length of query: 133
length of database: 191,569,459
effective HSP length: 99
effective length of query: 34
effective length of database: 138,147,475
effective search space: 4697014150
effective search space used: 4697014150
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)