Query psy12153
Match_columns 236
No_of_seqs 205 out of 1629
Neff 9.1
Searched_HMMs 46136
Date Fri Aug 16 20:04:54 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12153.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/12153hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR00898 2A0119 cation transp 99.9 1.6E-22 3.4E-27 182.4 19.8 174 14-206 113-286 (505)
2 KOG0255|consensus 99.9 6.6E-22 1.4E-26 179.4 18.0 175 15-208 105-279 (521)
3 TIGR01299 synapt_SV2 synaptic 99.9 5.4E-21 1.2E-25 178.5 18.7 171 16-208 193-379 (742)
4 TIGR00887 2A0109 phosphate:H+ 99.9 5E-20 1.1E-24 166.5 19.6 153 26-197 54-238 (502)
5 TIGR02332 HpaX 4-hydroxyphenyl 99.8 6.1E-20 1.3E-24 162.1 15.5 153 15-188 33-194 (412)
6 KOG0569|consensus 99.8 8.6E-20 1.9E-24 161.9 16.2 163 29-210 61-232 (485)
7 PRK10077 xylE D-xylose transpo 99.8 2.6E-19 5.7E-24 160.2 19.2 161 19-201 49-232 (479)
8 KOG0254|consensus 99.8 3.2E-19 7E-24 161.7 17.5 162 28-208 89-254 (513)
9 TIGR00903 2A0129 major facilit 99.8 6.1E-19 1.3E-23 153.7 16.5 154 15-190 16-172 (368)
10 TIGR00891 2A0112 putative sial 99.8 3.3E-18 7.2E-23 149.0 17.1 154 15-190 37-195 (405)
11 PRK15403 multidrug efflux syst 99.8 5E-18 1.1E-22 150.0 16.9 153 15-188 41-196 (413)
12 PF00083 Sugar_tr: Sugar (and 99.8 4.7E-22 1E-26 176.8 -9.1 161 27-206 45-214 (451)
13 PRK10642 proline/glycine betai 99.8 7.6E-18 1.7E-22 151.9 17.4 139 34-191 63-220 (490)
14 COG2814 AraJ Arabinose efflux 99.8 7.8E-18 1.7E-22 145.6 15.9 149 15-184 38-189 (394)
15 TIGR00879 SP MFS transporter, 99.8 1.2E-17 2.7E-22 147.8 17.2 154 26-198 69-231 (481)
16 TIGR00893 2A0114 d-galactonate 99.8 4.2E-18 9.2E-23 146.9 13.8 153 15-188 19-174 (399)
17 PRK03545 putative arabinose tr 99.8 1.5E-17 3.1E-22 145.6 17.1 152 15-187 34-188 (390)
18 PRK11551 putative 3-hydroxyphe 99.8 1.7E-17 3.7E-22 145.6 17.5 156 15-191 40-198 (406)
19 PRK10406 alpha-ketoglutarate t 99.8 2.1E-17 4.5E-22 146.7 16.9 139 33-190 68-225 (432)
20 PRK14995 methyl viologen resis 99.8 1.4E-17 3.1E-22 150.4 16.1 153 15-188 31-187 (495)
21 TIGR00895 2A0115 benzoate tran 99.8 2.1E-17 4.6E-22 143.3 16.5 158 15-193 42-202 (398)
22 PRK11663 regulatory protein Uh 99.8 1.3E-17 2.8E-22 148.2 14.6 154 15-189 48-204 (434)
23 PRK10213 nepI ribonucleoside t 99.8 3.7E-17 8E-22 143.6 17.0 151 16-187 46-199 (394)
24 PF07690 MFS_1: Major Facilita 99.8 2.3E-17 5E-22 140.9 15.0 152 16-188 23-177 (352)
25 KOG1330|consensus 99.7 1.5E-19 3.2E-24 156.8 -0.3 153 15-188 58-214 (493)
26 PRK12307 putative sialic acid 99.7 6E-17 1.3E-21 142.9 16.1 153 15-189 43-198 (426)
27 PRK10091 MFS transport protein 99.7 8.3E-17 1.8E-21 140.5 16.5 152 15-187 28-182 (382)
28 TIGR00710 efflux_Bcr_CflA drug 99.7 8.3E-17 1.8E-21 139.6 16.3 153 15-188 30-185 (385)
29 TIGR00890 2A0111 Oxalate/Forma 99.7 6.4E-17 1.4E-21 139.2 14.7 151 15-187 28-181 (377)
30 PRK09952 shikimate transporter 99.7 1E-16 2.2E-21 142.7 16.2 136 36-190 72-226 (438)
31 TIGR00881 2A0104 phosphoglycer 99.7 3E-18 6.4E-23 147.6 6.1 153 15-188 20-176 (379)
32 PRK15402 multidrug efflux syst 99.7 1.9E-16 4.2E-21 139.1 17.1 153 15-188 38-193 (406)
33 TIGR00894 2A0114euk Na(+)-depe 99.7 8.8E-17 1.9E-21 143.8 14.9 149 19-188 70-224 (465)
34 COG2271 UhpC Sugar phosphate p 99.7 1.5E-17 3.2E-22 143.2 8.6 155 13-188 52-211 (448)
35 TIGR00711 efflux_EmrB drug res 99.7 6.9E-17 1.5E-21 144.6 13.0 152 15-187 27-181 (485)
36 PRK11102 bicyclomycin/multidru 99.7 3.1E-16 6.7E-21 136.0 16.6 152 15-187 16-170 (377)
37 PRK10473 multidrug efflux syst 99.7 3.3E-16 7.2E-21 136.9 16.5 152 15-187 28-182 (392)
38 TIGR00900 2A0121 H+ Antiporter 99.7 3.3E-16 7.2E-21 134.3 15.9 137 18-175 27-171 (365)
39 KOG2533|consensus 99.7 1.2E-16 2.6E-21 143.2 13.5 161 7-188 60-232 (495)
40 PRK03893 putative sialic acid 99.7 4.2E-16 9E-21 140.2 16.8 154 15-190 45-201 (496)
41 PRK09705 cynX putative cyanate 99.7 3.8E-16 8.3E-21 137.0 15.8 136 15-172 34-173 (393)
42 PRK11652 emrD multidrug resist 99.7 4.5E-16 9.7E-21 136.2 16.1 153 15-188 33-188 (394)
43 KOG2532|consensus 99.7 3.9E-16 8.5E-21 139.3 15.8 152 17-189 65-222 (466)
44 PRK09556 uhpT sugar phosphate 99.7 6.8E-17 1.5E-21 144.8 10.8 153 15-188 54-217 (467)
45 TIGR00886 2A0108 nitrite extru 99.7 3.4E-16 7.4E-21 135.0 13.8 151 16-188 28-193 (366)
46 TIGR00806 rfc RFC reduced fola 99.7 9.6E-16 2.1E-20 135.2 14.8 153 15-189 51-208 (511)
47 PRK11043 putative transporter; 99.7 1.7E-15 3.6E-20 132.9 15.9 150 15-186 31-183 (401)
48 PLN00028 nitrate transmembrane 99.7 2.2E-15 4.7E-20 135.6 16.0 151 15-187 61-223 (476)
49 PRK11273 glpT sn-glycerol-3-ph 99.7 1.5E-15 3.1E-20 135.7 14.8 152 16-189 55-214 (452)
50 PRK12382 putative transporter; 99.7 3.3E-15 7.1E-20 130.7 16.3 135 17-172 43-188 (392)
51 TIGR00899 2A0120 sugar efflux 99.7 2.5E-15 5.4E-20 130.0 15.4 151 17-188 25-181 (375)
52 PRK11646 multidrug resistance 99.7 3.9E-15 8.5E-20 131.0 16.5 149 17-186 38-188 (400)
53 TIGR00712 glpT glycerol-3-phos 99.7 1.1E-15 2.4E-20 135.9 13.1 150 19-189 55-212 (438)
54 PRK11195 lysophospholipid tran 99.7 2.2E-15 4.7E-20 132.4 14.4 147 17-188 30-178 (393)
55 KOG2615|consensus 99.7 9.8E-16 2.1E-20 130.3 11.5 144 26-188 66-218 (451)
56 KOG0253|consensus 99.7 1.8E-15 3.9E-20 128.3 12.8 169 18-210 106-277 (528)
57 PRK10054 putative transporter; 99.6 3.4E-15 7.3E-20 131.2 14.8 149 17-186 35-185 (395)
58 TIGR00885 fucP L-fucose:H+ sym 99.6 5.6E-15 1.2E-19 130.5 16.2 143 15-178 28-202 (410)
59 PRK03699 putative transporter; 99.6 2.9E-15 6.3E-20 131.4 14.1 141 15-176 32-176 (394)
60 PRK15075 citrate-proton sympor 99.6 5.6E-15 1.2E-19 131.2 15.9 152 15-188 40-216 (434)
61 PRK05122 major facilitator sup 99.6 4.3E-15 9.4E-20 130.1 14.4 135 17-172 43-188 (399)
62 PRK10504 putative transporter; 99.6 6.4E-15 1.4E-19 131.9 15.5 151 15-186 35-188 (471)
63 PRK10642 proline/glycine betai 99.6 1.2E-14 2.6E-19 131.1 17.1 162 26-207 284-458 (490)
64 PRK15034 nitrate/nitrite trans 99.6 2E-14 4.2E-19 128.0 17.7 147 19-187 64-236 (462)
65 TIGR00883 2A0106 metabolite-pr 99.6 1.1E-14 2.4E-19 125.9 14.6 132 39-189 46-196 (394)
66 PTZ00207 hypothetical protein; 99.6 2.7E-14 6E-19 130.4 17.3 149 15-186 52-208 (591)
67 TIGR00880 2_A_01_02 Multidrug 99.6 1.1E-14 2.3E-19 107.9 12.2 134 35-186 5-141 (141)
68 PRK10133 L-fucose transporter; 99.6 2.1E-14 4.6E-19 127.9 16.1 121 15-156 51-174 (438)
69 PRK09874 drug efflux system pr 99.6 2.8E-14 6.1E-19 124.9 16.1 139 30-187 56-197 (408)
70 TIGR00892 2A0113 monocarboxyla 99.6 1.8E-14 3.9E-19 128.9 13.3 149 15-185 44-196 (455)
71 cd06174 MFS The Major Facilita 99.6 3.3E-14 7.2E-19 120.8 14.2 139 17-176 26-167 (352)
72 PRK10207 dipeptide/tripeptide 99.6 2.8E-14 6.1E-19 128.7 13.3 147 18-184 43-194 (489)
73 KOG0252|consensus 99.6 1.1E-14 2.4E-19 126.5 9.4 149 26-193 82-255 (538)
74 PRK03633 putative MFS family t 99.6 1.2E-13 2.7E-18 120.5 15.7 124 15-159 31-154 (381)
75 TIGR01299 synapt_SV2 synaptic 99.6 1.2E-13 2.7E-18 129.4 16.6 139 30-187 597-737 (742)
76 TIGR00897 2A0118 polyol permea 99.5 2.7E-13 5.8E-18 119.3 16.9 150 16-186 39-196 (402)
77 PRK10489 enterobactin exporter 99.5 4.9E-14 1.1E-18 124.3 12.2 149 18-188 45-201 (417)
78 TIGR00924 yjdL_sub1_fam amino 99.5 9.7E-14 2.1E-18 124.9 14.2 141 20-182 43-190 (475)
79 KOG3764|consensus 99.5 3.2E-14 6.8E-19 121.8 10.1 145 25-186 103-250 (464)
80 TIGR00805 oat sodium-independe 99.5 1.1E-14 2.3E-19 135.2 6.7 151 14-186 57-283 (633)
81 TIGR00896 CynX cyanate transpo 99.5 3E-13 6.6E-18 116.7 15.2 135 15-172 25-164 (355)
82 COG2223 NarK Nitrate/nitrite t 99.5 1.6E-13 3.4E-18 118.4 11.6 150 17-189 41-199 (417)
83 PRK08633 2-acyl-glycerophospho 99.5 6.4E-13 1.4E-17 130.7 15.7 145 27-189 46-205 (1146)
84 TIGR00901 2A0125 AmpG-related 99.5 2.4E-12 5.2E-17 111.1 16.7 150 15-187 13-182 (356)
85 PF06609 TRI12: Fungal trichot 99.5 1.1E-12 2.5E-17 119.5 15.2 137 27-182 77-216 (599)
86 PRK06814 acylglycerophosphoeth 99.4 2.2E-12 4.8E-17 127.2 15.7 141 28-187 52-198 (1140)
87 PRK15011 sugar efflux transpor 99.4 4.7E-12 1E-16 111.0 15.3 151 17-187 43-198 (393)
88 PRK11902 ampG muropeptide tran 99.4 1.7E-11 3.7E-16 107.8 17.4 147 18-188 27-186 (402)
89 TIGR00889 2A0110 nucleoside tr 99.4 9.1E-12 2E-16 110.3 14.9 141 28-186 251-405 (418)
90 TIGR00882 2A0105 oligosacchari 99.4 1.3E-11 2.8E-16 108.3 14.7 147 18-187 31-187 (396)
91 PRK15462 dipeptide/tripeptide 99.4 1.3E-11 2.8E-16 111.1 14.7 142 18-181 38-186 (493)
92 PRK15011 sugar efflux transpor 99.4 2.8E-11 6E-16 106.2 16.6 145 18-185 245-392 (393)
93 PRK09584 tppB putative tripept 99.4 1.4E-11 3E-16 111.6 15.0 136 18-172 50-190 (500)
94 PRK09528 lacY galactoside perm 99.4 2.1E-11 4.5E-16 107.8 14.6 142 26-185 260-405 (420)
95 PRK11010 ampG muropeptide tran 99.4 5.3E-11 1.1E-15 107.6 17.4 142 26-188 45-199 (491)
96 PRK05122 major facilitator sup 99.3 6.2E-11 1.3E-15 103.8 15.7 137 30-185 251-390 (399)
97 PRK11128 putative 3-phenylprop 99.3 3.5E-11 7.7E-16 105.1 13.6 144 17-186 31-181 (382)
98 PRK10077 xylE D-xylose transpo 99.3 6.5E-11 1.4E-15 106.0 15.3 143 26-186 304-460 (479)
99 PRK11551 putative 3-hydroxyphe 99.3 8.7E-11 1.9E-15 103.0 15.3 139 26-183 253-395 (406)
100 cd06174 MFS The Major Facilita 99.3 8.8E-11 1.9E-15 99.8 14.8 132 26-175 209-344 (352)
101 TIGR00899 2A0120 sugar efflux 99.3 1.8E-10 3.8E-15 99.6 15.9 145 18-185 228-375 (375)
102 TIGR00890 2A0111 Oxalate/Forma 99.3 7.1E-11 1.5E-15 101.5 13.0 134 18-172 233-371 (377)
103 PRK03893 putative sialic acid 99.3 5.6E-11 1.2E-15 107.0 12.3 133 18-171 304-441 (496)
104 KOG0569|consensus 99.3 2.9E-10 6.3E-15 101.5 16.4 148 18-186 298-457 (485)
105 TIGR00902 2A0127 phenyl propri 99.3 1.2E-10 2.7E-15 101.7 13.8 132 17-171 31-167 (382)
106 TIGR00792 gph sugar (Glycoside 99.3 7.2E-11 1.6E-15 104.5 12.4 149 18-187 28-198 (437)
107 PRK10489 enterobactin exporter 99.2 2E-10 4.4E-15 101.3 14.9 147 20-187 254-403 (417)
108 PRK09874 drug efflux system pr 99.2 2.2E-10 4.8E-15 100.3 14.9 135 30-182 260-397 (408)
109 PRK12382 putative transporter; 99.2 2.7E-10 5.9E-15 99.6 15.2 133 30-180 251-386 (392)
110 TIGR00879 SP MFS transporter, 99.2 8.4E-11 1.8E-15 104.1 11.7 149 18-187 312-474 (481)
111 PRK09528 lacY galactoside perm 99.2 1.9E-10 4E-15 101.7 13.8 148 18-186 39-194 (420)
112 TIGR00892 2A0113 monocarboxyla 99.2 1.3E-10 2.8E-15 104.1 12.2 129 26-172 274-410 (455)
113 PRK09556 uhpT sugar phosphate 99.2 4.2E-10 9.1E-15 101.0 15.4 134 18-172 287-438 (467)
114 COG0738 FucP Fucose permease [ 99.2 3.7E-10 8E-15 97.4 14.1 151 15-186 38-214 (422)
115 PRK09952 shikimate transporter 99.2 7.7E-10 1.7E-14 98.6 16.6 142 26-186 284-435 (438)
116 TIGR00898 2A0119 cation transp 99.2 4E-10 8.6E-15 101.8 14.6 134 35-187 362-498 (505)
117 KOG2504|consensus 99.2 1.4E-10 3.1E-15 104.9 10.8 151 15-187 71-225 (509)
118 TIGR01301 GPH_sucrose GPH fami 99.2 7.6E-10 1.7E-14 99.3 15.0 151 18-187 32-222 (477)
119 TIGR00887 2A0109 phosphate:H+ 99.2 7.7E-10 1.7E-14 100.2 14.6 132 37-187 344-492 (502)
120 PF11700 ATG22: Vacuole efflux 99.2 1.9E-09 4E-14 97.1 16.7 147 18-186 310-470 (477)
121 TIGR00889 2A0110 nucleoside tr 99.2 1.2E-09 2.5E-14 96.9 15.0 85 18-105 31-116 (418)
122 PF05977 MFS_3: Transmembrane 99.2 1.3E-09 2.7E-14 99.2 15.3 141 25-184 42-190 (524)
123 PRK03699 putative transporter; 99.1 1.6E-09 3.5E-14 95.0 14.8 146 18-186 234-382 (394)
124 PRK09705 cynX putative cyanate 99.1 2E-09 4.3E-14 94.5 15.4 148 18-188 233-386 (393)
125 PRK03545 putative arabinose tr 99.1 4.9E-09 1.1E-13 91.7 16.6 141 20-183 236-380 (390)
126 PRK03633 putative MFS family t 99.1 3E-09 6.4E-14 92.8 14.7 126 26-172 233-361 (381)
127 TIGR00902 2A0127 phenyl propri 99.1 6.3E-09 1.4E-13 90.9 16.0 133 18-172 233-368 (382)
128 TIGR00792 gph sugar (Glycoside 99.1 1.1E-08 2.4E-13 90.5 17.4 122 26-158 255-377 (437)
129 TIGR00893 2A0114 d-galactonate 99.1 4.3E-09 9.3E-14 90.7 13.8 132 26-176 249-392 (399)
130 TIGR00891 2A0112 putative sial 99.1 2.6E-09 5.5E-14 93.0 12.5 120 19-159 268-388 (405)
131 PLN00028 nitrate transmembrane 99.1 1.8E-09 3.8E-14 97.3 11.8 143 19-184 282-433 (476)
132 PF05631 DUF791: Protein of un 99.0 1.6E-08 3.5E-13 86.4 15.8 152 18-187 62-220 (354)
133 COG2270 Permeases of the major 99.0 3.7E-09 8E-14 91.8 11.9 147 18-186 281-431 (438)
134 TIGR00883 2A0106 metabolite-pr 99.0 4.9E-09 1.1E-13 90.6 12.9 132 19-171 249-389 (394)
135 KOG0253|consensus 99.0 1E-09 2.2E-14 93.7 7.8 132 37-186 390-522 (528)
136 PRK10504 putative transporter; 99.0 1.6E-08 3.6E-13 90.5 15.8 116 26-159 295-413 (471)
137 COG3104 PTR2 Dipeptide/tripept 99.0 1.9E-09 4.1E-14 95.3 9.1 142 26-184 59-206 (498)
138 TIGR00882 2A0105 oligosacchari 99.0 2.4E-08 5.2E-13 87.5 15.6 138 26-181 252-393 (396)
139 PRK12307 putative sialic acid 99.0 1.3E-08 2.9E-13 89.7 13.9 116 26-159 264-381 (426)
140 TIGR00897 2A0118 polyol permea 99.0 3.3E-08 7.2E-13 87.0 16.1 136 18-176 250-394 (402)
141 PRK11273 glpT sn-glycerol-3-ph 99.0 3.6E-08 7.7E-13 88.2 16.5 136 19-175 283-427 (452)
142 TIGR00900 2A0121 H+ Antiporter 99.0 1.4E-08 2.9E-13 87.0 13.2 118 20-158 242-360 (365)
143 PRK10406 alpha-ketoglutarate t 99.0 3.1E-08 6.8E-13 88.0 15.8 144 19-184 273-424 (432)
144 TIGR00895 2A0115 benzoate tran 99.0 1.2E-08 2.5E-13 88.5 12.7 114 26-158 283-397 (398)
145 PRK11010 ampG muropeptide tran 99.0 3.3E-08 7.1E-13 89.5 16.0 146 19-186 252-405 (491)
146 PRK15075 citrate-proton sympor 99.0 3.1E-08 6.7E-13 88.1 15.5 118 20-158 269-391 (434)
147 PRK08633 2-acyl-glycerophospho 98.9 1.4E-08 3E-13 100.3 14.1 147 19-186 262-413 (1146)
148 KOG0254|consensus 98.9 1.9E-08 4E-13 91.5 13.0 161 31-202 332-496 (513)
149 PF05977 MFS_3: Transmembrane 98.9 8.6E-09 1.9E-13 93.8 10.7 133 19-172 248-383 (524)
150 PRK09848 glucuronide transport 98.9 1.4E-07 3E-12 84.2 17.8 122 26-158 262-385 (448)
151 PRK09669 putative symporter Ya 98.9 3.3E-08 7.1E-13 88.2 13.0 148 18-186 38-207 (444)
152 PRK11663 regulatory protein Uh 98.9 5.1E-08 1.1E-12 86.7 14.2 146 19-185 273-426 (434)
153 PRK10429 melibiose:sodium symp 98.9 3E-07 6.6E-12 82.8 19.2 117 26-158 264-390 (473)
154 COG2807 CynX Cyanate permease 98.8 1.1E-07 2.4E-12 81.2 14.2 136 14-172 36-175 (395)
155 PRK11128 putative 3-phenylprop 98.8 1.6E-07 3.4E-12 82.1 15.8 132 18-172 233-368 (382)
156 PRK15402 multidrug efflux syst 98.8 1.8E-07 3.9E-12 82.2 15.9 119 19-159 245-368 (406)
157 TIGR00788 fbt folate/biopterin 98.8 6E-08 1.3E-12 87.3 12.6 149 18-187 54-212 (468)
158 TIGR00712 glpT glycerol-3-phos 98.8 6.3E-08 1.4E-12 86.2 12.3 143 26-186 285-436 (438)
159 TIGR02718 sider_RhtX_FptX side 98.8 2.4E-07 5.3E-12 81.0 15.6 148 17-185 28-186 (390)
160 TIGR02718 sider_RhtX_FptX side 98.8 3.4E-07 7.3E-12 80.1 16.0 134 18-172 236-380 (390)
161 KOG2325|consensus 98.8 7.1E-08 1.5E-12 86.0 11.7 146 26-190 69-236 (488)
162 PF06813 Nodulin-like: Nodulin 98.8 2.1E-07 4.5E-12 76.7 13.4 149 15-186 27-184 (250)
163 PRK09669 putative symporter Ya 98.8 6.6E-07 1.4E-11 79.8 17.5 119 29-158 265-385 (444)
164 COG2271 UhpC Sugar phosphate p 98.8 9.3E-08 2E-12 83.2 11.4 141 26-184 286-435 (448)
165 TIGR00711 efflux_EmrB drug res 98.8 1.2E-07 2.7E-12 84.9 12.7 120 20-160 286-409 (485)
166 PRK10054 putative transporter; 98.8 2.2E-07 4.7E-12 81.7 14.0 128 26-172 242-373 (395)
167 PRK10091 MFS transport protein 98.8 3.4E-07 7.3E-12 80.0 14.9 133 20-175 230-368 (382)
168 TIGR00710 efflux_Bcr_CflA drug 98.7 6.3E-07 1.4E-11 77.6 16.4 115 19-155 236-356 (385)
169 PRK10473 multidrug efflux syst 98.7 3.2E-07 7E-12 80.2 14.1 118 19-158 233-350 (392)
170 COG2814 AraJ Arabinose efflux 98.7 3.6E-07 7.9E-12 79.7 13.8 141 16-180 238-382 (394)
171 PF01306 LacY_symp: LacY proto 98.7 3.5E-07 7.6E-12 80.4 13.4 143 26-186 257-403 (412)
172 PRK14995 methyl viologen resis 98.7 3.1E-07 6.8E-12 83.1 13.7 116 26-159 293-411 (495)
173 PRK10429 melibiose:sodium symp 98.7 2.8E-07 6.1E-12 83.0 13.1 147 19-186 36-204 (473)
174 PF13347 MFS_2: MFS/sugar tran 98.7 3E-08 6.6E-13 88.0 6.8 146 19-185 31-200 (428)
175 PRK06814 acylglycerophosphoeth 98.7 2.6E-07 5.5E-12 91.6 13.9 145 19-184 255-423 (1140)
176 PRK10213 nepI ribonucleoside t 98.7 1.4E-06 3E-11 76.6 16.4 133 18-172 245-380 (394)
177 PRK11902 ampG muropeptide tran 98.7 1.2E-06 2.5E-11 77.1 15.7 137 18-180 238-386 (402)
178 TIGR01272 gluP glucose/galacto 98.7 9E-07 2E-11 75.5 14.5 125 20-168 173-300 (310)
179 TIGR00901 2A0125 AmpG-related 98.7 2.6E-07 5.7E-12 79.6 11.2 105 19-144 238-354 (356)
180 PRK11195 lysophospholipid tran 98.7 6.5E-07 1.4E-11 78.7 13.8 119 19-159 235-354 (393)
181 PRK11102 bicyclomycin/multidru 98.7 1.7E-06 3.8E-11 74.9 16.2 118 19-158 224-346 (377)
182 COG0477 ProP Permeases of the 98.6 1.7E-06 3.6E-11 70.9 15.0 127 28-172 39-174 (338)
183 TIGR02332 HpaX 4-hydroxyphenyl 98.6 3E-07 6.4E-12 81.3 11.0 128 26-171 277-409 (412)
184 PRK11646 multidrug resistance 98.6 1.1E-06 2.4E-11 77.4 14.4 116 26-159 241-357 (400)
185 PF03825 Nuc_H_symport: Nucleo 98.6 2.6E-06 5.7E-11 75.2 16.1 143 26-186 241-398 (400)
186 PRK10133 L-fucose transporter; 98.6 1.4E-06 3.1E-11 77.7 14.7 130 19-172 289-422 (438)
187 KOG2504|consensus 98.6 4.2E-07 9.1E-12 82.5 11.0 145 18-184 326-476 (509)
188 PF07690 MFS_1: Major Facilita 98.6 4.1E-07 8.9E-12 77.5 10.3 114 18-152 235-352 (352)
189 COG2211 MelB Na+/melibiose sym 98.6 3.9E-06 8.4E-11 74.8 16.4 121 26-158 270-393 (467)
190 TIGR00896 CynX cyanate transpo 98.6 1.2E-06 2.6E-11 75.6 12.6 119 19-159 226-346 (355)
191 TIGR00881 2A0104 phosphoglycer 98.6 4.5E-07 9.8E-12 77.9 10.0 116 26-159 250-370 (379)
192 PRK11462 putative transporter; 98.6 8.5E-06 1.8E-10 73.3 18.3 115 28-158 263-384 (460)
193 PRK09584 tppB putative tripept 98.6 2.9E-06 6.3E-11 77.1 15.5 138 30-185 318-481 (500)
194 PF13347 MFS_2: MFS/sugar tran 98.5 1.4E-06 3E-11 77.4 12.6 120 28-158 260-381 (428)
195 TIGR00903 2A0129 major facilit 98.5 2.7E-06 5.9E-11 74.2 14.2 134 30-185 228-366 (368)
196 KOG2816|consensus 98.5 1E-06 2.2E-11 79.0 11.3 130 36-188 70-204 (463)
197 TIGR00894 2A0114euk Na(+)-depe 98.5 1.5E-06 3.3E-11 77.8 12.4 143 19-184 291-450 (465)
198 PRK11462 putative transporter; 98.5 4.7E-06 1E-10 74.9 15.3 148 19-187 39-208 (460)
199 KOG0252|consensus 98.5 7.6E-08 1.6E-12 84.5 3.6 133 40-186 360-500 (538)
200 COG2223 NarK Nitrate/nitrite t 98.5 7.9E-07 1.7E-11 77.3 9.3 139 17-177 246-395 (417)
201 TIGR00788 fbt folate/biopterin 98.5 1.6E-06 3.6E-11 78.0 11.6 116 26-159 286-411 (468)
202 PRK15034 nitrate/nitrite trans 98.4 5.6E-06 1.2E-10 74.2 14.0 148 34-182 292-453 (462)
203 KOG4686|consensus 98.4 1.6E-06 3.4E-11 72.2 9.4 120 17-159 292-412 (459)
204 PF00083 Sugar_tr: Sugar (and 98.4 2E-09 4.3E-14 95.8 -8.5 134 35-186 293-439 (451)
205 PF03825 Nuc_H_symport: Nucleo 98.4 7.6E-06 1.7E-10 72.3 14.2 92 18-112 30-122 (400)
206 PRK11043 putative transporter; 98.4 2.5E-05 5.4E-10 68.4 17.0 120 18-159 231-355 (401)
207 PRK09848 glucuronide transport 98.4 8.9E-06 1.9E-10 72.6 14.3 95 18-115 37-144 (448)
208 TIGR00926 2A1704 Peptide:H+ sy 98.4 2.2E-05 4.7E-10 73.4 16.3 132 26-172 21-171 (654)
209 TIGR00924 yjdL_sub1_fam amino 98.4 1.8E-05 3.8E-10 71.5 15.3 137 30-184 314-469 (475)
210 PRK10207 dipeptide/tripeptide 98.3 1.6E-05 3.4E-10 72.1 14.4 137 30-184 311-477 (489)
211 KOG0255|consensus 98.3 3.1E-05 6.6E-10 70.5 16.4 136 34-187 356-496 (521)
212 TIGR00885 fucP L-fucose:H+ sym 98.3 2E-05 4.4E-10 69.7 14.2 111 28-159 269-379 (410)
213 PF11700 ATG22: Vacuole efflux 98.3 7.6E-05 1.6E-09 67.4 17.9 163 26-188 68-252 (477)
214 PRK11652 emrD multidrug resist 98.3 4.4E-05 9.6E-10 66.7 15.7 115 26-159 241-358 (394)
215 KOG2563|consensus 98.2 1.2E-05 2.7E-10 70.6 10.7 144 26-187 77-239 (480)
216 COG2807 CynX Cyanate permease 98.2 3.6E-05 7.7E-10 66.1 12.9 146 16-182 234-384 (395)
217 KOG3762|consensus 98.2 2.9E-06 6.3E-11 76.0 6.3 125 30-172 408-536 (618)
218 PF01306 LacY_symp: LacY proto 98.2 8.2E-06 1.8E-10 71.9 8.7 144 20-186 38-191 (412)
219 PF03137 OATP: Organic Anion T 98.1 3.4E-07 7.3E-12 83.7 -0.9 124 14-158 27-200 (539)
220 PF05978 UNC-93: Ion channel r 98.1 9.5E-05 2.1E-09 56.6 12.6 105 32-155 41-145 (156)
221 PF01770 Folate_carrier: Reduc 98.1 0.00012 2.6E-09 64.4 14.4 137 32-188 45-186 (412)
222 COG2211 MelB Na+/melibiose sym 98.1 8.6E-05 1.9E-09 66.3 13.2 150 18-188 41-212 (467)
223 TIGR01301 GPH_sucrose GPH fami 98.1 0.00021 4.5E-09 64.5 15.5 142 30-187 307-475 (477)
224 TIGR00886 2A0108 nitrite extru 98.1 1.6E-05 3.4E-10 68.5 8.0 107 19-147 255-365 (366)
225 TIGR01272 gluP glucose/galacto 97.9 8E-05 1.7E-09 63.5 9.6 92 77-186 6-117 (310)
226 KOG3764|consensus 97.8 9.8E-05 2.1E-09 64.2 8.3 142 27-180 305-451 (464)
227 PTZ00207 hypothetical protein; 97.8 0.0011 2.3E-08 61.4 15.5 136 33-188 396-557 (591)
228 PF03209 PUCC: PUCC protein; 97.8 0.00062 1.3E-08 59.6 12.8 122 15-158 5-148 (403)
229 PF03209 PUCC: PUCC protein; 97.7 0.0028 6.1E-08 55.5 16.1 120 18-158 237-360 (403)
230 PRK15403 multidrug efflux syst 97.7 0.0022 4.8E-08 56.8 15.3 132 19-172 248-386 (413)
231 PF06609 TRI12: Fungal trichot 97.7 0.00097 2.1E-08 61.6 13.0 109 29-155 350-461 (599)
232 PF06779 DUF1228: Protein of u 97.6 0.00019 4.2E-09 48.9 5.9 67 15-84 17-83 (85)
233 PF03092 BT1: BT1 family; Int 97.6 0.001 2.3E-08 59.4 12.3 148 18-185 18-177 (433)
234 KOG2532|consensus 97.6 0.00035 7.5E-09 63.0 8.8 137 19-177 288-441 (466)
235 KOG2533|consensus 97.6 0.00071 1.5E-08 61.4 10.5 90 26-115 307-401 (495)
236 COG0738 FucP Fucose permease [ 97.6 0.0019 4.2E-08 56.4 12.5 113 26-159 270-382 (422)
237 PRK15462 dipeptide/tripeptide 97.5 0.0056 1.2E-07 55.6 14.8 139 29-185 309-480 (493)
238 KOG3626|consensus 97.4 0.00016 3.5E-09 67.6 4.6 151 15-187 122-346 (735)
239 KOG4686|consensus 97.3 7.2E-05 1.6E-09 62.6 0.3 115 26-158 77-195 (459)
240 PF12832 MFS_1_like: MFS_1 lik 97.2 0.00067 1.4E-08 45.6 4.9 47 18-67 28-74 (77)
241 PF00854 PTR2: POT family; In 97.1 0.0062 1.4E-07 53.1 10.7 108 59-182 2-121 (372)
242 COG2270 Permeases of the major 97.1 0.012 2.6E-07 51.8 12.0 144 26-187 56-224 (438)
243 PF03092 BT1: BT1 family; Int 97.1 0.0074 1.6E-07 54.0 11.1 142 26-186 253-415 (433)
244 KOG4332|consensus 97.0 0.0015 3.2E-08 54.5 5.7 84 26-110 70-154 (454)
245 KOG2816|consensus 97.0 0.024 5.2E-07 51.1 13.3 119 18-158 270-389 (463)
246 PF02487 CLN3: CLN3 protein; 97.0 0.0035 7.5E-08 55.2 7.8 133 31-186 62-198 (402)
247 TIGR00769 AAA ADP/ATP carrier 96.9 0.058 1.3E-06 48.7 15.4 116 26-159 41-189 (472)
248 KOG3098|consensus 96.8 0.084 1.8E-06 47.4 15.4 109 31-158 282-411 (461)
249 KOG2615|consensus 96.4 0.02 4.2E-07 50.0 8.1 123 18-161 290-414 (451)
250 COG3104 PTR2 Dipeptide/tripept 96.3 0.11 2.4E-06 46.8 12.6 139 29-185 325-489 (498)
251 PRK03612 spermidine synthase; 96.3 0.31 6.6E-06 44.8 15.8 29 26-54 48-76 (521)
252 PF02487 CLN3: CLN3 protein; 96.0 0.11 2.4E-06 45.9 11.0 113 26-160 279-396 (402)
253 KOG1237|consensus 96.0 0.045 9.7E-07 50.7 9.0 135 26-172 71-234 (571)
254 KOG0637|consensus 95.9 0.012 2.6E-07 52.3 4.6 116 26-159 65-203 (498)
255 KOG3098|consensus 95.2 0.13 2.7E-06 46.3 8.7 106 34-158 56-161 (461)
256 PF03219 TLC: TLC ATP/ADP tran 93.9 3.4 7.4E-05 37.7 14.8 133 26-159 56-204 (491)
257 PF06963 FPN1: Ferroportin1 (F 93.7 2 4.3E-05 38.6 12.8 116 26-159 291-416 (432)
258 KOG2563|consensus 93.2 0.18 4E-06 44.9 5.3 90 26-115 299-394 (480)
259 COG3202 ATP/ADP translocase [E 92.9 6.5 0.00014 35.8 14.5 118 25-160 58-209 (509)
260 KOG3762|consensus 92.7 0.11 2.4E-06 47.3 3.4 58 17-77 38-96 (618)
261 TIGR00939 2a57 Equilibrative N 92.5 4 8.7E-05 36.7 13.0 32 81-113 106-137 (437)
262 KOG1330|consensus 91.3 0.49 1.1E-05 42.5 5.7 30 26-55 281-310 (493)
263 KOG3574|consensus 90.0 3.9 8.5E-05 36.2 9.8 96 45-158 80-192 (510)
264 KOG0637|consensus 89.5 0.15 3.2E-06 45.6 0.9 129 26-154 330-463 (498)
265 PF06963 FPN1: Ferroportin1 (F 88.4 18 0.0004 32.5 15.5 141 28-176 38-193 (432)
266 TIGR00806 rfc RFC reduced fola 87.6 7.5 0.00016 35.5 10.3 87 29-115 299-387 (511)
267 KOG3810|consensus 86.9 1.2 2.5E-05 38.8 4.6 131 40-189 54-188 (433)
268 TIGR00939 2a57 Equilibrative N 83.8 14 0.0003 33.3 10.3 60 80-157 371-430 (437)
269 KOG1479|consensus 83.1 25 0.00055 31.2 11.3 31 81-111 117-147 (406)
270 PF01770 Folate_carrier: Reduc 82.8 15 0.00033 32.7 9.9 88 26-113 283-372 (412)
271 KOG1479|consensus 82.5 10 0.00022 33.7 8.7 108 31-156 285-400 (406)
272 TIGR01666 YCCS hypothetical me 82.3 37 0.00079 32.6 12.8 47 49-95 44-95 (704)
273 TIGR00805 oat sodium-independe 81.1 2 4.3E-05 40.5 4.0 54 18-74 359-415 (633)
274 KOG3880|consensus 81.0 9.5 0.00021 32.9 7.5 70 74-161 335-404 (409)
275 PF13000 Acatn: Acetyl-coenzym 79.5 29 0.00062 31.9 10.5 25 134-158 153-177 (544)
276 COG5336 Uncharacterized protei 78.6 9.2 0.0002 27.2 5.7 35 30-64 44-79 (116)
277 TIGR01667 YCCS_YHJK integral m 77.9 48 0.001 31.9 12.1 43 53-95 51-95 (701)
278 KOG4332|consensus 70.9 46 0.00099 28.4 8.9 88 28-115 282-378 (454)
279 PF11947 DUF3464: Protein of u 70.0 31 0.00066 26.3 7.1 81 50-151 56-146 (153)
280 KOG3880|consensus 69.8 7.5 0.00016 33.5 4.1 69 31-99 65-133 (409)
281 TIGR00880 2_A_01_02 Multidrug 67.7 20 0.00044 25.0 5.8 30 31-60 90-119 (141)
282 PF01733 Nucleoside_tran: Nucl 66.6 2.4 5.1E-05 36.1 0.6 106 33-156 187-305 (309)
283 PF12805 FUSC-like: FUSC-like 60.0 1E+02 0.0022 25.8 11.2 18 170-187 83-100 (284)
284 KOG3810|consensus 56.8 45 0.00097 29.4 6.5 88 28-115 271-360 (433)
285 KOG3097|consensus 56.4 25 0.00055 30.6 5.0 113 39-156 69-182 (390)
286 KOG2325|consensus 55.5 5.8 0.00012 36.1 1.1 65 90-172 397-464 (488)
287 PF07672 MFS_Mycoplasma: Mycop 52.7 1.4E+02 0.003 25.0 10.4 79 31-109 144-232 (267)
288 COG4262 Predicted spermidine s 52.1 1.7E+02 0.0037 26.0 11.4 84 25-108 40-132 (508)
289 COG1268 BioY Uncharacterized c 49.9 60 0.0013 25.6 5.8 23 35-57 89-111 (184)
290 PF02632 BioY: BioY family; I 48.6 96 0.0021 23.4 6.6 23 36-58 61-83 (148)
291 PF11833 DUF3353: Protein of u 48.3 1.2E+02 0.0025 24.1 7.3 25 134-158 140-164 (194)
292 PF04281 Tom22: Mitochondrial 44.7 82 0.0018 23.5 5.6 26 125-150 61-86 (137)
293 PRK10720 uracil transporter; P 41.9 2.5E+02 0.0054 25.2 9.3 16 174-189 396-411 (428)
294 TIGR00986 3a0801s05tom22 mitoc 41.7 81 0.0018 23.7 5.1 22 125-146 59-80 (145)
295 TIGR02230 ATPase_gene1 F0F1-AT 39.8 1.3E+02 0.0029 21.1 6.1 33 31-63 46-78 (100)
296 PF01733 Nucleoside_tran: Nucl 36.1 12 0.00026 31.8 0.0 24 90-114 6-29 (309)
297 PF06123 CreD: Inner membrane 33.5 3.6E+02 0.0079 24.3 11.6 26 1-26 233-259 (430)
298 COG2233 UraA Xanthine/uracil p 32.8 2.9E+02 0.0062 25.1 8.1 49 139-187 388-437 (451)
299 PF10183 ESSS: ESSS subunit of 31.7 70 0.0015 22.6 3.4 28 160-187 58-85 (105)
300 PF07857 DUF1632: CEO family ( 31.1 51 0.0011 27.3 2.9 53 134-186 78-138 (254)
301 COG1575 MenA 1,4-dihydroxy-2-n 30.8 3.4E+02 0.0074 23.2 10.4 65 97-161 54-121 (303)
302 PF03547 Mem_trans: Membrane t 30.2 3.6E+02 0.0078 23.3 9.2 17 143-159 103-119 (385)
303 PRK14229 camphor resistance pr 29.2 2.1E+02 0.0046 20.2 8.6 24 89-112 57-80 (108)
304 PRK02237 hypothetical protein; 27.5 1.5E+02 0.0032 21.2 4.3 44 30-73 58-101 (109)
305 PF02694 UPF0060: Uncharacteri 26.9 1.1E+02 0.0024 21.7 3.6 47 28-74 54-100 (107)
306 PRK03612 spermidine synthase; 26.8 5.1E+02 0.011 23.9 14.5 52 88-158 117-168 (521)
307 TIGR00926 2A1704 Peptide:H+ sy 26.7 5.7E+02 0.012 24.4 10.0 54 87-158 571-624 (654)
308 PF10785 NADH-u_ox-rdase: NADH 25.6 2.2E+02 0.0048 19.3 5.0 40 41-80 31-77 (86)
309 COG3086 RseC Positive regulato 25.1 3.1E+02 0.0067 20.8 6.6 41 19-62 66-106 (150)
310 PF06912 DUF1275: Protein of u 23.7 3.6E+02 0.0079 21.1 15.2 24 135-158 166-189 (209)
311 COG4769 Predicted membrane pro 23.6 1.1E+02 0.0023 23.8 3.2 13 47-59 92-104 (181)
312 PF12273 RCR: Chitin synthesis 21.9 52 0.0011 24.1 1.3 11 162-172 1-11 (130)
313 PF03137 OATP: Organic Anion T 21.5 31 0.00067 31.9 0.0 55 16-73 332-389 (539)
314 TIGR02230 ATPase_gene1 F0F1-AT 21.4 3E+02 0.0065 19.3 6.3 23 137-159 45-67 (100)
315 COG1422 Predicted membrane pro 20.6 2.5E+02 0.0054 22.4 4.8 10 147-156 34-43 (201)
No 1
>TIGR00898 2A0119 cation transport protein.
Probab=99.90 E-value=1.6e-22 Score=182.44 Aligned_cols=174 Identities=29% Similarity=0.570 Sum_probs=157.8
Q ss_pred CcceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Q psy12153 14 GEPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGF 93 (236)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 93 (236)
.++.+||++.|++..+.++..+++.++..+++++.|+++||+|||++++++.++..++.++.+++++++.+++.|++.|+
T Consensus 113 ~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~ 192 (505)
T TIGR00898 113 STIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGM 192 (505)
T ss_pred ccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHh
Confidence 46789999988889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHhHHH
Q psy12153 94 FVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFPNWRDAELVTSLPFV 173 (236)
Q Consensus 94 ~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~~w~~~~~i~~~~~~ 173 (236)
+.+...+....++.|++|+++| +...++...+..+|.++++.++..+.+||+.+++.+++.
T Consensus 193 ~~~~~~~~~~~~~~e~~~~~~r------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~wr~~~~~~~i~~- 253 (505)
T TIGR00898 193 GIGGIWVQAVVLNTEFLPKKQR------------------AIVGTLIQVFFSLGLVLLPLVAYFIPDWRWLQLAVSLPT- 253 (505)
T ss_pred hccchHHHHHHHhheecChhhh------------------HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH-
Confidence 9999999999999999999999 999999999999999999999988888999999998887
Q ss_pred HHHHHHHhhcccchhHHHhcCCHhHHHHHHHHh
Q psy12153 174 GFSLFYVWFIPESPLWKYTKNKIIDFEYLCDDE 206 (236)
Q Consensus 174 ~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~ 206 (236)
++..+..+++||+|+|...+++.+++.+..++.
T Consensus 254 ~~~~~~~~~~~esp~~l~~~~~~~~a~~~l~~~ 286 (505)
T TIGR00898 254 FLFFLLSWFVPESPRWLISQGRIEEALKILQRI 286 (505)
T ss_pred HHHHHHHHhcCCChHHHHHCCCHHHHHHHHHHH
Confidence 444455578999999998888877776655543
No 2
>KOG0255|consensus
Probab=99.89 E-value=6.6e-22 Score=179.41 Aligned_cols=175 Identities=27% Similarity=0.447 Sum_probs=152.9
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFF 94 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 94 (236)
++..+|++.|.+.....+..+++++|..+|++++|.++||+|||++++++.++..++.++.++++|++.+++.|++.|++
T Consensus 105 s~~~~~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~ 184 (521)
T KOG0255|consen 105 SIVSEWNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFF 184 (521)
T ss_pred cccchhceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 45677999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHhHHHH
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFPNWRDAELVTSLPFVG 174 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~~w~~~~~i~~~~~~~ 174 (236)
.++.......++.|+.++++| +....+....+..|.++.+..+....+||+.+++..++. +
T Consensus 185 ~~~~~~~~~~~~~E~~~~~~R------------------~~~~~~~~~~~~~~~~~~~~~a~~~~~Wr~~~~~~~~~~-~ 245 (521)
T KOG0255|consen 185 GSGPLTVGFGLVAEIVSPKQR------------------GLALTLGGFFFVGGLMLPAGAAYITRDWRWLFWIISIPS-G 245 (521)
T ss_pred ccchhHHhHhhheeecCcchh------------------hHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH-H
Confidence 999999999999999999999 888888444555555555555555668999999999998 4
Q ss_pred HHHHHHhhcccchhHHHhcCCHhHHHHHHHHhhh
Q psy12153 175 FSLFYVWFIPESPLWKYTKNKIIDFEYLCDDESH 208 (236)
Q Consensus 175 ~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~ 208 (236)
..++.+++.||+|||...+++.+++.+.+++..+
T Consensus 246 ~~~~~~~l~~Es~rwl~~~g~~~~a~~~l~~~a~ 279 (521)
T KOG0255|consen 246 LFLLLWFLPPESPRWLLSKGRIDEAIKILKKIAK 279 (521)
T ss_pred HHHHHHHccCcChHHHHHcCchHHHHHHHHHHHh
Confidence 4444577777999999999999888887776543
No 3
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.87 E-value=5.4e-21 Score=178.54 Aligned_cols=171 Identities=19% Similarity=0.297 Sum_probs=151.3
Q ss_pred ceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh
Q psy12153 16 PVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFV 95 (236)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~ 95 (236)
+..++++ +..+.+++.+++.++.+++++++|+++||+|||+.++++.++.+++.++.+++++++.++++|++.|++.
T Consensus 193 i~~~~gl---s~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~ 269 (742)
T TIGR01299 193 AEKDLCI---PDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGI 269 (742)
T ss_pred HHHHhCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 3457888 8899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc----------------c
Q psy12153 96 QGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF----------------P 159 (236)
Q Consensus 96 ~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~----------------~ 159 (236)
++..+....++.|++|++.| +...++...++.+|.++++.++..+ .
T Consensus 270 g~~~p~~~~~isE~~p~~~R------------------g~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~ 331 (742)
T TIGR01299 270 GGAIPIVFSYFAEFLAQEKR------------------GEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFH 331 (742)
T ss_pred HHHHHHHHHHHHHHCCHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccc
Confidence 99999999999999999999 9999999999999999888765432 2
Q ss_pred hhHHHHHHHHhHHHHHHHHHHhhcccchhHHHhcCCHhHHHHHHHHhhh
Q psy12153 160 NWRDAELVTSLPFVGFSLFYVWFIPESPLWKYTKNKIIDFEYLCDDESH 208 (236)
Q Consensus 160 ~w~~~~~i~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~ 208 (236)
+||+.+++.+++. ++.++..+++||||+|+..+++.+++.+.+++..+
T Consensus 332 gWR~l~~i~~lp~-ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~ 379 (742)
T TIGR01299 332 SWRVFVIVCAFPC-VFAIGALTFMPESPRFFLENGKHDEAWMILKLIHD 379 (742)
T ss_pred cHHHHHHHHHHHH-HHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhc
Confidence 5899888877766 66677788899999999999998888877766543
No 4
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.85 E-value=5e-20 Score=166.50 Aligned_cols=153 Identities=19% Similarity=0.222 Sum_probs=133.5
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhcc------HHHHHHHHHHHHHhhhhhh
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRS------FPVYLILRTMQGFFVQGLQ 99 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~g~~~~~~~ 99 (236)
+..+.+++.+.+.++..++++++|+++||+|||+++.++.++..++.++.+++++ ++.++++|+++|++.|...
T Consensus 54 ~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~ 133 (502)
T TIGR00887 54 PSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDY 133 (502)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhh
Confidence 5567789999999999999999999999999999999999999999888887665 6789999999999999999
Q ss_pred HHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc---------------------
Q psy12153 100 NSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF--------------------- 158 (236)
Q Consensus 100 ~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~--------------------- 158 (236)
+....++.|++|+++| ++..++.+....+|..+++.++..+
T Consensus 134 ~~~~~~~~e~~p~~~R------------------g~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (502)
T TIGR00887 134 PLSAIITSEFATKKWR------------------GAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSC 195 (502)
T ss_pred HHHHHHHHHhcChhhH------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccc
Confidence 9999999999999999 9999999999999998888776432
Q ss_pred -----chhHHHHHHHHhHHHHHHHHHHhhcccchhHHHhcCCHh
Q psy12153 159 -----PNWRDAELVTSLPFVGFSLFYVWFIPESPLWKYTKNKII 197 (236)
Q Consensus 159 -----~~w~~~~~i~~~~~~~~~~~~~~~~pet~~~~~~~~~~~ 197 (236)
.+||+++.+.+++. ++.++..+++||||+|...+++.+
T Consensus 196 ~~~~~~~WR~~~~~~~ip~-~i~~~~~~~lpESpr~l~~~~~~~ 238 (502)
T TIGR00887 196 VPAVDYMWRILIGFGAVPA-LLALYFRLTIPETPRYTADVAKDV 238 (502)
T ss_pred cchhcccHHHHHHHHHHHH-HHHHHHHHhCCCCHHHHHHhCcch
Confidence 15999998777776 566666788999999998777653
No 5
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.84 E-value=6.1e-20 Score=162.10 Aligned_cols=153 Identities=18% Similarity=0.237 Sum_probs=140.4
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFF 94 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 94 (236)
.+.+|+++ +..+.++..+++.+++.+++++.|+++||+|||+++..+.++..+++...++++|++.+++.|++.|++
T Consensus 33 ~l~~~~~~---s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 109 (412)
T TIGR02332 33 TMGKDLGL---SATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGPESLYLLRILVGIA 109 (412)
T ss_pred hhHhhcCC---CHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 45689999 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc---------chhHHHH
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF---------PNWRDAE 165 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~---------~~w~~~~ 165 (236)
.+...+....++.|++|+++| ++..++.+....+|..+++.+++++ .+||+.|
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~r------------------g~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f 171 (412)
T TIGR02332 110 EAGFLPGILLYLTFWFPAYFR------------------ARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLF 171 (412)
T ss_pred HhhHHHHHHHHHHHHcCHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHH
Confidence 999888888999999999999 9999999999999999999887764 2899999
Q ss_pred HHHHhHHHHHHHHHHhhcccchh
Q psy12153 166 LVTSLPFVGFSLFYVWFIPESPL 188 (236)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~pet~~ 188 (236)
++.+++.++..++.++++||+|+
T Consensus 172 ~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 172 LLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred HHHHHHHHHHHHHHhhccCCCcc
Confidence 99888886667777788899985
No 6
>KOG0569|consensus
Probab=99.84 E-value=8.6e-20 Score=161.94 Aligned_cols=163 Identities=22% Similarity=0.308 Sum_probs=142.1
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHH---hccHHHHHHHHHHHHHhhhhhhHHHHHH
Q psy12153 29 WNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVY---NRSFPVYLILRTMQGFFVQGLQNSTYTL 105 (236)
Q Consensus 29 ~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 105 (236)
..+.+++++.+|.++|++..++++||+|||..++++.++..++.+.+.. .+++..++++|++.|+..|........+
T Consensus 61 lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmy 140 (485)
T KOG0569|consen 61 LWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMY 140 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 4588889999999999999999999999999999998888888877765 5678899999999999999999999999
Q ss_pred HHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHh--cc---hhHHHHHHHHhHHHHHHHHHH
Q psy12153 106 LIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYW--FP---NWRDAELVTSLPFVGFSLFYV 180 (236)
Q Consensus 106 ~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~--~~---~w~~~~~i~~~~~~~~~~~~~ 180 (236)
+.|..|++.| |....+.+.+..+|.+++..++.- +. .|.+.+....++. ++.++..
T Consensus 141 l~E~sP~~~R------------------G~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~-~~~l~~l 201 (485)
T KOG0569|consen 141 LTEISPKNLR------------------GALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPA-LLQLALL 201 (485)
T ss_pred HhhcChhhhc------------------cHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHH-HHHHHHH
Confidence 9999999999 999999999999999999766543 22 5988888888877 7778888
Q ss_pred hhcccchhHHHh-cCCHhHHHHHHHHhhhhc
Q psy12153 181 WFIPESPLWKYT-KNKIIDFEYLCDDESHRE 210 (236)
Q Consensus 181 ~~~pet~~~~~~-~~~~~~~~~~~~~~~~~~ 210 (236)
.++||||||+.. |++.+++++.++..+..+
T Consensus 202 ~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~ 232 (485)
T KOG0569|consen 202 PFLPESPKYLLIKKGDEEEARKALKFYRGKE 232 (485)
T ss_pred hcCCCCcchHHHHcCCHHHHHHHHHHHhCCC
Confidence 999999999987 788889988877665544
No 7
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.84 E-value=2.6e-19 Score=160.23 Aligned_cols=161 Identities=20% Similarity=0.291 Sum_probs=134.9
Q ss_pred eeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHh------------ccHHHHHH
Q psy12153 19 LWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYN------------RSFPVYLI 86 (236)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~------------~~~~~~~~ 86 (236)
++++ +..+.+++.+++.++..++++++|+++||+|||++++++.++..++.+..++. ++.+.+++
T Consensus 49 ~~~~---~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 125 (479)
T PRK10077 49 SESA---ANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVI 125 (479)
T ss_pred cccC---ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHH
Confidence 3466 78899999999999999999999999999999999999999988887776652 22456789
Q ss_pred HHHHHHHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc--------
Q psy12153 87 LRTMQGFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF-------- 158 (236)
Q Consensus 87 ~~~l~g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~-------- 158 (236)
.|+++|++.|...+....+++|++|+++| ++..++.+.+..+|.++++.++..+
T Consensus 126 ~R~l~G~~~g~~~~~~~~~i~e~~~~~~r------------------g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~ 187 (479)
T PRK10077 126 YRIIGGIGVGLASMLSPMYIAEIAPAHIR------------------GKLVSFNQFAIIFGQLVVYFVNYFIARSGDASW 187 (479)
T ss_pred HHHHHhhhHhHHhhHHHHHHHhhCChhhh------------------hHHHHHHHHHHHHHHHHHHHHHHHHhccCcccc
Confidence 99999999999999999999999999999 9999999999999999888776533
Q ss_pred ---chhHHHHHHHHhHHHHHHHHHHhhcccchhHHHhcCCHhHHHH
Q psy12153 159 ---PNWRDAELVTSLPFVGFSLFYVWFIPESPLWKYTKNKIIDFEY 201 (236)
Q Consensus 159 ---~~w~~~~~i~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~ 201 (236)
.+||+.|++.+++. ++..+..+++||+|++...+++.+++..
T Consensus 188 ~~~~gWr~~f~~~~~~~-~~~~~~~~~l~~s~~~l~~~~~~~~~~~ 232 (479)
T PRK10077 188 LNTDGWRYMFASEAIPA-LLFLMLLYFVPETPRYLMSRGKQEQAEG 232 (479)
T ss_pred cccCChHHHHHHHHHHH-HHHHHHHHcCCCCcHHHHHcCCHHHHHH
Confidence 27999999888777 4445567789999998766666555433
No 8
>KOG0254|consensus
Probab=99.82 E-value=3.2e-19 Score=161.73 Aligned_cols=162 Identities=23% Similarity=0.327 Sum_probs=147.8
Q ss_pred chhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhhHHHHHHHH
Q psy12153 28 KWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQNSTYTLLI 107 (236)
Q Consensus 28 ~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~ 107 (236)
.+.+++.+...++..+++++.|.++|++|||++++++.+...++.++.++++|...++++|++.|++.|......+.+.+
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~s 168 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYIS 168 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHh
Confidence 35589999999999999999999999999999999999999999999999999999999999999999999988999999
Q ss_pred hhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc----hhHHHHHHHHhHHHHHHHHHHhhc
Q psy12153 108 ELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP----NWRDAELVTSLPFVGFSLFYVWFI 183 (236)
Q Consensus 108 e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~----~w~~~~~i~~~~~~~~~~~~~~~~ 183 (236)
|..|++.| |...+..++...+|..++..++.... +||..+.+..+++++..+. .+++
T Consensus 169 Eiap~~~R------------------G~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~ 229 (513)
T KOG0254|consen 169 EIAPAHIR------------------GTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFL 229 (513)
T ss_pred hcCChhhh------------------HHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhC
Confidence 99999999 99999999999999999977777774 6999998888888555555 8999
Q ss_pred ccchhHHHhcCCHhHHHHHHHHhhh
Q psy12153 184 PESPLWKYTKNKIIDFEYLCDDESH 208 (236)
Q Consensus 184 pet~~~~~~~~~~~~~~~~~~~~~~ 208 (236)
||+|+|..++++.++++..+.....
T Consensus 230 pesp~~L~~~g~~~~a~~~l~~l~g 254 (513)
T KOG0254|consen 230 PESPRWLIEKGRLEEAKRSLKRLRG 254 (513)
T ss_pred CCChHHHHHcCChHHHHHHHHHHhC
Confidence 9999999999999998888776655
No 9
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.82 E-value=6.1e-19 Score=153.65 Aligned_cols=154 Identities=11% Similarity=0.008 Sum_probs=128.7
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFF 94 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 94 (236)
.+.+||++ +..+.+++.+.+.+++.+++++.|+++||+|||++++.+......+.......+++..+++.|+++|++
T Consensus 16 ~i~~~~~~---s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g 92 (368)
T TIGR00903 16 LVAEDIDV---SKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAALG 92 (368)
T ss_pred HHHHHhCc---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhH
Confidence 55678999 999999999999999999999999999999999987655544444333223337899999999999999
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhH
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLP 171 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~ 171 (236)
.+. .......++|++|+++| +++.++.+.+..+|..+++.++..+. +||+.|++.+++
T Consensus 93 ~~~-~~~~~~~~~~~~~~~~r------------------~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l 153 (368)
T TIGR00903 93 QPF-LLNAFAPAASQIREERR------------------DLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAV 153 (368)
T ss_pred hHH-HHHHHHHHHHHcCHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHH
Confidence 875 45556667999999999 99999999999999999999888874 899999998888
Q ss_pred HHHHHHHHHhhcccchhHH
Q psy12153 172 FVGFSLFYVWFIPESPLWK 190 (236)
Q Consensus 172 ~~~~~~~~~~~~pet~~~~ 190 (236)
+++..++.++++||+|++.
T Consensus 154 ~~~~~~~~~~~lp~~p~~~ 172 (368)
T TIGR00903 154 AAAGIILVLAALPALPFQA 172 (368)
T ss_pred HHHHHHHHHHHcCCCCCCC
Confidence 8677777888899988653
No 10
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.80 E-value=3.3e-18 Score=149.02 Aligned_cols=154 Identities=25% Similarity=0.347 Sum_probs=136.0
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFF 94 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 94 (236)
.+.+++++ +..+.+++.+++.++..+++++.|+++||+|||++++++.++..++++...+.++++.+++.|++.|++
T Consensus 37 ~l~~~~~~---s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~ 113 (405)
T TIGR00891 37 EVAGEFGL---TTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPGYITMFIARLVIGIG 113 (405)
T ss_pred HHHHHhCC---ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhh
Confidence 45678888 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc-----hhHHHHHHHH
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP-----NWRDAELVTS 169 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~-----~w~~~~~i~~ 169 (236)
.+...+....++.|++|+++| ++..++.+....+|..+++.+...+. +||+.|++.+
T Consensus 114 ~~~~~~~~~~~i~~~~~~~~~------------------~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~ 175 (405)
T TIGR00891 114 MGGEYGSSAAYVIESWPKHLR------------------NKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISI 175 (405)
T ss_pred hhhhhHHHHHHHHHhCChhhh------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHH
Confidence 999999999999999999999 99999999999999999998877653 3999998766
Q ss_pred hHHHHHHHHHHhhcccchhHH
Q psy12153 170 LPFVGFSLFYVWFIPESPLWK 190 (236)
Q Consensus 170 ~~~~~~~~~~~~~~pet~~~~ 190 (236)
+.. +..++....+||++++.
T Consensus 176 ~~~-~~~~~~~~~~~~~~~~~ 195 (405)
T TIGR00891 176 LPI-IFALWLRKNIPEAEDWK 195 (405)
T ss_pred HHH-HHHHHHHHhCCCChhHH
Confidence 555 45555666789987654
No 11
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.79 E-value=5e-18 Score=149.97 Aligned_cols=153 Identities=19% Similarity=0.189 Sum_probs=134.4
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFF 94 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 94 (236)
.+.++++. +..+.++..+++.+++.++++++|+++||+|||++++.+.++..++.+....+++++.+++.|+++|++
T Consensus 41 ~i~~~~~~---~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~ 117 (413)
T PRK15403 41 NVVRDFNA---DVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTS 117 (413)
T ss_pred HHHHHhCC---CHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 45678888 999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhH
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLP 171 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~ 171 (236)
.+...+....++.|.+++++| ++..+.......+|..++|.+++.+. +||+.|++.++.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~ 179 (413)
T PRK15403 118 ICFIATVGYVTVQEAFGQTKG------------------IKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVM 179 (413)
T ss_pred HHHHHHHHHHHHHHhcCHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 876666677889999999888 89999999999999999998887664 799999998888
Q ss_pred HHHHHHHHHhhcccchh
Q psy12153 172 FVGFSLFYVWFIPESPL 188 (236)
Q Consensus 172 ~~~~~~~~~~~~pet~~ 188 (236)
.++..+...+.+||+++
T Consensus 180 ~~i~~~~~~~~lp~~~~ 196 (413)
T PRK15403 180 GLIAFVGLLLAMPETVK 196 (413)
T ss_pred HHHHHHHHHHhCCCCcc
Confidence 75555555667898754
No 12
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.79 E-value=4.7e-22 Score=176.78 Aligned_cols=161 Identities=27% Similarity=0.474 Sum_probs=144.4
Q ss_pred cchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHhhhhhhHHHH
Q psy12153 27 CKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNR---SFPVYLILRTMQGFFVQGLQNSTY 103 (236)
Q Consensus 27 ~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~g~~~~~~~~~~~ 103 (236)
....++..+...+|..+|++++|.++||+|||++++++.++..++.++..+++ +++.+.++|++.|++.|+..+...
T Consensus 45 ~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~ 124 (451)
T PF00083_consen 45 SLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSP 124 (451)
T ss_pred HHHHHHHHHHHHhhhccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 45678999999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---h---hHHHHHHHHhHHHHHHH
Q psy12153 104 TLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---N---WRDAELVTSLPFVGFSL 177 (236)
Q Consensus 104 ~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~---w~~~~~i~~~~~~~~~~ 177 (236)
.++.|..|++.| +....+.+..+.+|.+++..+...+. + ||..+++..++. +..+
T Consensus 125 ~~~~E~~~~~~R------------------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~-l~~~ 185 (451)
T PF00083_consen 125 IYISEIAPPKHR------------------GFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPS-LLVL 185 (451)
T ss_pred cccccccccccc------------------ccccccccccccccccccccccccccccccccccccccccccccc-cccc
Confidence 999999999999 99999999999999988887765542 4 999998888887 5556
Q ss_pred HHHhhcccchhHHHhcCCHhHHHHHHHHh
Q psy12153 178 FYVWFIPESPLWKYTKNKIIDFEYLCDDE 206 (236)
Q Consensus 178 ~~~~~~pet~~~~~~~~~~~~~~~~~~~~ 206 (236)
+..+++||||+|...+++.+++.+..++.
T Consensus 186 ~~~~~~pESP~wL~~~~~~~~A~~~l~~~ 214 (451)
T PF00083_consen 186 LLRFFLPESPRWLLSKGRDEEAEKVLRKL 214 (451)
T ss_pred ccccccccccceecccccccccccccccc
Confidence 67788999999999999888888777663
No 13
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.78 E-value=7.6e-18 Score=151.89 Aligned_cols=139 Identities=22% Similarity=0.265 Sum_probs=119.5
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHH--------HHHHHHHHHHhhhhhhHHHHHH
Q psy12153 34 VTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPV--------YLILRTMQGFFVQGLQNSTYTL 105 (236)
Q Consensus 34 ~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~l~g~~~~~~~~~~~~~ 105 (236)
.++..++..++++++|+++||+|||+++.++.++.+++++++++++++.. +++.|+++|++.|+.++....+
T Consensus 63 ~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~ 142 (490)
T PRK10642 63 FSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIF 142 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHH
Confidence 47788999999999999999999999999999999999999999999864 7889999999999999999999
Q ss_pred HHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc-----------chhHHHHHHHHhHHHH
Q psy12153 106 LIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF-----------PNWRDAELVTSLPFVG 174 (236)
Q Consensus 106 ~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~-----------~~w~~~~~i~~~~~~~ 174 (236)
+.|++|+++| ++..++.+.+..+|..+++.+...+ .+||+.|++.+++. +
T Consensus 143 ~~e~~p~~~R------------------g~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~-l 203 (490)
T PRK10642 143 VAEYSPDRKR------------------GFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLG-I 203 (490)
T ss_pred HHHhCCCCCC------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHH-H
Confidence 9999999999 9999998888888887777554322 27999999877655 4
Q ss_pred HHHHHHhhcccchhHHH
Q psy12153 175 FSLFYVWFIPESPLWKY 191 (236)
Q Consensus 175 ~~~~~~~~~pet~~~~~ 191 (236)
+.++....+||+|++..
T Consensus 204 ~~~~~~~~~~esp~~~~ 220 (490)
T PRK10642 204 IGLYLRHALEETPAFQQ 220 (490)
T ss_pred HHHHHHHcCCCChhHHH
Confidence 55556677899998753
No 14
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.78 E-value=7.8e-18 Score=145.65 Aligned_cols=149 Identities=20% Similarity=0.176 Sum_probs=142.3
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFF 94 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 94 (236)
.+.+|+++ +....|+..+.|.++..+++++...+.||+.||++++..+.+..+++++.++++|++.++++|++.|+.
T Consensus 38 ~iA~dl~v---s~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a 114 (394)
T COG2814 38 PIAADLGV---SEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLARALAGLA 114 (394)
T ss_pred HHHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 56789999 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhH
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLP 171 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~ 171 (236)
.|..++....+..++.|+++| +++.+....+..++.++|..++.++. |||..|+..+.+
T Consensus 115 ~G~f~~i~~~~a~~lvpp~~~------------------~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l 176 (394)
T COG2814 115 HGVFWSIAAALAARLVPPGKR------------------GRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVL 176 (394)
T ss_pred HHHHHHHHHHHHHHHcCccch------------------hhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHH
Confidence 999999999999999999999 99999999999999999988888885 899999999999
Q ss_pred HHHHHHHHHhhcc
Q psy12153 172 FVGFSLFYVWFIP 184 (236)
Q Consensus 172 ~~~~~~~~~~~~p 184 (236)
+++..+..+..+|
T Consensus 177 ~ll~~~~~~~~lP 189 (394)
T COG2814 177 ALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHHHHHhCC
Confidence 9788888888899
No 15
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.77 E-value=1.2e-17 Score=147.77 Aligned_cols=154 Identities=23% Similarity=0.353 Sum_probs=132.1
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHhhhhhhHHH
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNR---SFPVYLILRTMQGFFVQGLQNST 102 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~g~~~~~~~~~~ 102 (236)
+..+.+++.+++.++..++++++|+++||+|||++++++.++..++..+..... +++.+++.|++.|++.+...+..
T Consensus 69 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~ 148 (481)
T TIGR00879 69 SSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALV 148 (481)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHH
Confidence 478999999999999999999999999999999999999999999888886543 44588999999999999999999
Q ss_pred HHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHH---Hhc---chhHHHHHHHHhHHHHHH
Q psy12153 103 YTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVS---YWF---PNWRDAELVTSLPFVGFS 176 (236)
Q Consensus 103 ~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~---~~~---~~w~~~~~i~~~~~~~~~ 176 (236)
..++.|++|+++| ++..++.+.+..+|..+++.++ ... .+||+.|++.++.. +..
T Consensus 149 ~~~i~~~~~~~~r------------------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~-~~~ 209 (481)
T TIGR00879 149 PMYLSEIAPKALR------------------GALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPA-GLL 209 (481)
T ss_pred HHHHHccCChhhh------------------hhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHH-HHH
Confidence 9999999999999 9999999999999999999998 443 28999999866655 556
Q ss_pred HHHHhhcccchhHHHhcCCHhH
Q psy12153 177 LFYVWFIPESPLWKYTKNKIID 198 (236)
Q Consensus 177 ~~~~~~~pet~~~~~~~~~~~~ 198 (236)
++..+++||+|++...+++.++
T Consensus 210 ~~~~~~l~~~~~~~~~~~~~~~ 231 (481)
T TIGR00879 210 FLGLFFLPESPRWLVGKGRVEE 231 (481)
T ss_pred HHHHhcCCCChHHHHHcCChHH
Confidence 6667788999887655554443
No 16
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.77 E-value=4.2e-18 Score=146.91 Aligned_cols=153 Identities=18% Similarity=0.288 Sum_probs=137.6
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFF 94 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 94 (236)
.+.+++++ +..+.+++.+++.++..++.++.|+++||+|||+++.++.++..++....++.++++.+++.|++.|++
T Consensus 19 ~~~~~~g~---s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 95 (399)
T TIGR00893 19 MLQEDLGL---SAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAA 95 (399)
T ss_pred HHHHhhCC---ChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 34567888 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhH
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLP 171 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~ 171 (236)
.+...+....++.|++|+++| ++..+..+....+|..+++.+.+.+. +||+.|++.++.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~r------------------~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~ 157 (399)
T TIGR00893 96 EAPFFPGIILIVASWFPASER------------------ATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVL 157 (399)
T ss_pred HHhhhhHHHHHHHHhCCHHHH------------------HHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHH
Confidence 999999999999999999999 99999999999999999999888653 799999988888
Q ss_pred HHHHHHHHHhhcccchh
Q psy12153 172 FVGFSLFYVWFIPESPL 188 (236)
Q Consensus 172 ~~~~~~~~~~~~pet~~ 188 (236)
.++..++..++.||+|+
T Consensus 158 ~~~~~~~~~~~~~~~~~ 174 (399)
T TIGR00893 158 GIIWGVLWLKFIPDPPQ 174 (399)
T ss_pred HHHHHHHhhheecCCCC
Confidence 75666666667777654
No 17
>PRK03545 putative arabinose transporter; Provisional
Probab=99.77 E-value=1.5e-17 Score=145.57 Aligned_cols=152 Identities=20% Similarity=0.173 Sum_probs=137.1
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFF 94 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 94 (236)
.+.+++|+ +..+.++..+.+.+++.+++++.|.++||+|||+++..+.++.++++..+.+.+|++.+++.|+++|++
T Consensus 34 ~l~~~~~~---s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~ 110 (390)
T PRK03545 34 DIAQSFHM---QTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFA 110 (390)
T ss_pred HHHhHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 45678999 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhH
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLP 171 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~ 171 (236)
.+...+....++.|++|+++| ++..++...+..+|..++|.++..+. +||+.|++.+++
T Consensus 111 ~~~~~~~~~~~i~~~~~~~~r------------------~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~ 172 (390)
T PRK03545 111 HAIFWSITASLAIRVAPAGKK------------------AQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGG 172 (390)
T ss_pred HHHHHHHHHHHHHHhCChhhh------------------hhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHH
Confidence 888888889999999999999 99999999999999999999887763 899999999888
Q ss_pred HHHHHHHHHhhcccch
Q psy12153 172 FVGFSLFYVWFIPESP 187 (236)
Q Consensus 172 ~~~~~~~~~~~~pet~ 187 (236)
.++..+.....+||.|
T Consensus 173 ~~l~~~~~~~~~~~~~ 188 (390)
T PRK03545 173 ALITLLLLIKLLPLLP 188 (390)
T ss_pred HHHHHHHHHHhCCCCC
Confidence 7556556666677754
No 18
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.77 E-value=1.7e-17 Score=145.56 Aligned_cols=156 Identities=22% Similarity=0.271 Sum_probs=138.3
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFF 94 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 94 (236)
.+.+++++ +..+.+++.+.+.++..++.++.|+++||+|||+++..+.++..++.+...+.++++.+++.|++.|++
T Consensus 40 ~~~~~~~~---s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 116 (406)
T PRK11551 40 RMAQEFGL---DVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVG 116 (406)
T ss_pred HHHHHhCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhh
Confidence 45678888 999999999999999999999999999999999999999999999888888999999999999999999
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhH
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLP 171 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~ 171 (236)
.+...+....++.|++|+++| ++..++.+....+|..+++.++..+. +|++.|++.++.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~r------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (406)
T PRK11551 117 LGGALPNLIALTSEAVGPRLR------------------GTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVG 178 (406)
T ss_pred HHHHHHHHHHHHHHHcCHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHH
Confidence 998888899999999999999 99999999999999999998876653 699999888777
Q ss_pred HHHHHHHHHhhcccchhHHH
Q psy12153 172 FVGFSLFYVWFIPESPLWKY 191 (236)
Q Consensus 172 ~~~~~~~~~~~~pet~~~~~ 191 (236)
.++..++..+++||+|++..
T Consensus 179 ~~~~~~~~~~~l~~~~~~~~ 198 (406)
T PRK11551 179 PLLLVPLLMRWLPESRAFAQ 198 (406)
T ss_pred HHHHHHHHHHhCCCChhHHh
Confidence 65555666677899876543
No 19
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.76 E-value=2.1e-17 Score=146.73 Aligned_cols=139 Identities=22% Similarity=0.188 Sum_probs=113.9
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHH--------HHHHHHHHHHHhhhhhhHHHHH
Q psy12153 33 VVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFP--------VYLILRTMQGFFVQGLQNSTYT 104 (236)
Q Consensus 33 ~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~g~~~~~~~~~~~~ 104 (236)
..+..+++..++++++|+++||+|||+++.++.++.+++++++++.+++. .+++.|+++|++.|+.++....
T Consensus 68 ~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~ 147 (432)
T PRK10406 68 VFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSAT 147 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHH
Confidence 33445555569999999999999999999999999999999999888764 5888999999999999999999
Q ss_pred HHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc-----------chhHHHHHHHHhHHH
Q psy12153 105 LLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF-----------PNWRDAELVTSLPFV 173 (236)
Q Consensus 105 ~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~-----------~~w~~~~~i~~~~~~ 173 (236)
++.|++|+++| ++..+..+.+...|..+++.+...+ .+||++|++.+++.
T Consensus 148 ~i~e~~p~~~r------------------g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~- 208 (432)
T PRK10406 148 YMSEVAVEGRK------------------GFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLA- 208 (432)
T ss_pred HHHHhCCCCcc------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHH-
Confidence 99999999999 9888888888888877776554322 38999999877776
Q ss_pred HHHHHHHhhcccchhHH
Q psy12153 174 GFSLFYVWFIPESPLWK 190 (236)
Q Consensus 174 ~~~~~~~~~~pet~~~~ 190 (236)
++.++....+||+|++.
T Consensus 209 ll~~~~~~~~~e~~~~~ 225 (432)
T PRK10406 209 VVALWLRRQLDETSQQE 225 (432)
T ss_pred HHHHHHHhcCCCCchHH
Confidence 44455566688887643
No 20
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.76 E-value=1.4e-17 Score=150.35 Aligned_cols=153 Identities=14% Similarity=0.099 Sum_probs=136.4
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFF 94 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 94 (236)
++.+|+|. +..+.+|+.+.+.++..++.+++|+++||+|||++++++.++..++++.++.++|.+.++++|+++|++
T Consensus 31 ~i~~~l~~---s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g 107 (495)
T PRK14995 31 TLSMTLGA---SGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLAIG 107 (495)
T ss_pred HHHHHhCC---CHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 56678888 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHhhc-CccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHh
Q psy12153 95 VQGLQNSTYTLLIELF-PTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSL 170 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~-~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~ 170 (236)
.+...+.....+.+.+ |+++| ++..++......+|..++|.+++.+. +||+.|++...
T Consensus 108 ~~~~~~~~~~~l~~~~~~~~~r------------------~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~ 169 (495)
T PRK14995 108 AAMIVPATLAGIRATFTEEKQR------------------NMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVP 169 (495)
T ss_pred HHHHHHHHHHHHHHHcCCHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHH
Confidence 9888887777776765 67888 99999999999999999999998884 89999998887
Q ss_pred HHHHHHHHHHhhcccchh
Q psy12153 171 PFVGFSLFYVWFIPESPL 188 (236)
Q Consensus 171 ~~~~~~~~~~~~~pet~~ 188 (236)
+.++..++..+++||.++
T Consensus 170 ~~~~~~~l~~~~l~~~~~ 187 (495)
T PRK14995 170 IVLVVMGLTARYVPRQAG 187 (495)
T ss_pred HHHHHHHHHHHhCCCCCC
Confidence 775666667777888653
No 21
>TIGR00895 2A0115 benzoate transport.
Probab=99.76 E-value=2.1e-17 Score=143.32 Aligned_cols=158 Identities=23% Similarity=0.345 Sum_probs=139.1
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFF 94 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 94 (236)
.+.+++|+ +..+.+++.+++.++..++.++.|+++||+|||+.++.+.++..++..+....++.+.+++.|++.|++
T Consensus 42 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 118 (398)
T TIGR00895 42 AISAEWGL---DPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLG 118 (398)
T ss_pred HHhhccCC---CHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcc
Confidence 34567788 889999999999999999999999999999999999999999999999888999999999999999999
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhH
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLP 171 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~ 171 (236)
.+...+....++.|++|+++| ++..+.......+|..+++.+.+.+. +|+..+++.++.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~r------------------~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~ 180 (398)
T TIGR00895 119 LGGLMPNLNALVSEYAPKRFR------------------GTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIA 180 (398)
T ss_pred cccchhhHHHHHHHHcCHHhh------------------chhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhH
Confidence 999999999999999999999 99999999999999999999887763 789888888766
Q ss_pred HHHHHHHHHhhcccchhHHHhc
Q psy12153 172 FVGFSLFYVWFIPESPLWKYTK 193 (236)
Q Consensus 172 ~~~~~~~~~~~~pet~~~~~~~ 193 (236)
.++..++..+++||++++..++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~ 202 (398)
T TIGR00895 181 PLLLLLLLMRFLPESIDFLVSK 202 (398)
T ss_pred HHHHHHHHHHhCCCCChHHHhc
Confidence 6566667777889987765433
No 22
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.76 E-value=1.3e-17 Score=148.18 Aligned_cols=154 Identities=20% Similarity=0.276 Sum_probs=137.8
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFF 94 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 94 (236)
.+.+++|+ +..+.+++.+.+.++..+++++.|+++||+|||+++.++.++.++++++.+..++++.+++.|++.|++
T Consensus 48 ~~~~~~g~---s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~ 124 (434)
T PRK11663 48 EMLADLGL---SRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAFF 124 (434)
T ss_pred HHHHhcCC---CHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 55678888 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhH
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLP 171 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~ 171 (236)
.|...+....++.|++|+++| ++..++.+....+|..+++.+.+.+. +||+.|++.+++
T Consensus 125 ~g~~~~~~~~~~~~~~~~~~r------------------g~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~ 186 (434)
T PRK11663 125 QGWGWPVCAKLLTAWYSRTER------------------GGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGII 186 (434)
T ss_pred HHccchHHHHHHHHhCCHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 988888889999999999999 99999999999999999998877663 899999988887
Q ss_pred HHHHHHHHHhhcccchhH
Q psy12153 172 FVGFSLFYVWFIPESPLW 189 (236)
Q Consensus 172 ~~~~~~~~~~~~pet~~~ 189 (236)
.++..++..+++||+|++
T Consensus 187 ~~~~~~~~~~~~~~~p~~ 204 (434)
T PRK11663 187 AIVVGLFLCWRLRDKPQA 204 (434)
T ss_pred HHHHHHHHHHHcCCCHhh
Confidence 755556666678888754
No 23
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.76 E-value=3.7e-17 Score=143.57 Aligned_cols=151 Identities=16% Similarity=0.157 Sum_probs=135.1
Q ss_pred ceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh
Q psy12153 16 PVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFV 95 (236)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~ 95 (236)
+.+++++ +..+.++..+++.++..++.++.|.++||+|||++++.+.++.+++.+.....++++.+++.|+++|++.
T Consensus 46 ~~~~~g~---s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 122 (394)
T PRK10213 46 MAQDLGI---SEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLAL 122 (394)
T ss_pred HHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHhh
Confidence 4578888 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhHH
Q psy12153 96 QGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLPF 172 (236)
Q Consensus 96 ~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~~ 172 (236)
+...+....++.|++|+++| ++..+......++|..++|.+++.+. +||+.|++.+++.
T Consensus 123 g~~~~~~~~~i~~~~~~~~~------------------~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~ 184 (394)
T PRK10213 123 GGFWAMSASLTMRLVPPRTV------------------PKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMG 184 (394)
T ss_pred HHHHHHHHHHHHHHcCHhHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Confidence 99999999999999999999 99999999999999999999988774 8999999888776
Q ss_pred HHHHHHHHhhcccch
Q psy12153 173 VGFSLFYVWFIPESP 187 (236)
Q Consensus 173 ~~~~~~~~~~~pet~ 187 (236)
++..++.....||+|
T Consensus 185 ~~~~l~~~~~~p~~~ 199 (394)
T PRK10213 185 VLCIFWIIKSLPSLP 199 (394)
T ss_pred HHHHHHHHHHCCCCC
Confidence 444444445578764
No 24
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.75 E-value=2.3e-17 Score=140.94 Aligned_cols=152 Identities=24% Similarity=0.351 Sum_probs=131.4
Q ss_pred ceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh
Q psy12153 16 PVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFV 95 (236)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~ 95 (236)
+.+++|. +..+.+++.+++.++..+++++.|+++||+|||++++.+.++.+++..+..++++.+.+++.|++.|++.
T Consensus 23 ~~~~~~~---s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~ 99 (352)
T PF07690_consen 23 LAEELGL---SPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGIGS 99 (352)
T ss_dssp HHCCSTT---TSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred HHHccCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhcccccccc
Confidence 4567788 8999999999999999999999999999999999999999999999666666678888999999999999
Q ss_pred hhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhHH
Q psy12153 96 QGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLPF 172 (236)
Q Consensus 96 ~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~~ 172 (236)
+...+....++.|++|+++| ++..+..+....+|..+++.+++.+. +||+.|++.++..
T Consensus 100 ~~~~~~~~~~i~~~~~~~~~------------------~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~ 161 (352)
T PF07690_consen 100 GFFSPASNALIADWFPPEER------------------GRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILS 161 (352)
T ss_dssp HHHHHHHHHHHHHCCCTCCH------------------HHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHH
T ss_pred ccccccccccccccchhhhh------------------hhccccccchhhhhhhcccchhhhhhhccccccccccccchh
Confidence 99999999999999999999 99999999999999999999999885 7999999999888
Q ss_pred HHHHHHHHhhcccchh
Q psy12153 173 VGFSLFYVWFIPESPL 188 (236)
Q Consensus 173 ~~~~~~~~~~~pet~~ 188 (236)
++..++..++++++++
T Consensus 162 ~~~~il~~~~~~~~~~ 177 (352)
T PF07690_consen 162 LIAAILFILFLPEPPP 177 (352)
T ss_dssp HHHHHHHHCCC---ST
T ss_pred hhhhhhHhhhhhhccc
Confidence 5555554566665543
No 25
>KOG1330|consensus
Probab=99.74 E-value=1.5e-19 Score=156.79 Aligned_cols=153 Identities=19% Similarity=0.185 Sum_probs=143.9
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFF 94 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 94 (236)
++.+.||+ +.+..|++++++.++.+++++++|+++||++||+++.+|..++.++.++.++++.+|.+++.|.+.|+|
T Consensus 58 ~v~~~fni---~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiG 134 (493)
T KOG1330|consen 58 EVQTYFNI---SDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIG 134 (493)
T ss_pred HHHHhcCC---CchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 55667888 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc----hhHHHHHHHHh
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP----NWRDAELVTSL 170 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~----~w~~~~~i~~~ 170 (236)
.+...+..+.+++|.+|..+| ++..++++++..+|..+|.+++..+. .|||.|++.++
T Consensus 135 eAs~~~ia~s~IaD~f~~~~R------------------s~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~av 196 (493)
T KOG1330|consen 135 EASYSPIAPSLIADSFPDDKR------------------SRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAV 196 (493)
T ss_pred hhhhcccchhHhhhcCcchhh------------------hHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehH
Confidence 999999999999999999999 99999999999999999988887774 49999999999
Q ss_pred HHHHHHHHHHhhcccchh
Q psy12153 171 PFVGFSLFYVWFIPESPL 188 (236)
Q Consensus 171 ~~~~~~~~~~~~~pet~~ 188 (236)
++++++++..++.+|.+|
T Consensus 197 l~vi~~~L~~~f~~eP~r 214 (493)
T KOG1330|consen 197 LGVIVGLLVFLFVREPER 214 (493)
T ss_pred HHHHHHHHHHhhccCccc
Confidence 998889999999998764
No 26
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.74 E-value=6e-17 Score=142.94 Aligned_cols=153 Identities=22% Similarity=0.253 Sum_probs=131.8
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFF 94 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 94 (236)
.+.+++|+ +..+.++..+++.++..+++++.|+++||+|||++++++.++.+++..+.++.++++.+++.|++.|++
T Consensus 43 ~i~~~~~~---s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g 119 (426)
T PRK12307 43 LIKADLGL---TDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMG 119 (426)
T ss_pred HHHHHhCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 34568888 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhH
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLP 171 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~ 171 (236)
.+..++....++.|++|+++| ++..++...+..+|.++++.+...+. +||+.|++..+.
T Consensus 120 ~g~~~~~~~~~~~~~~~~~~r------------------~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~ 181 (426)
T PRK12307 120 MAGEYACASTYAVESWPKHLK------------------SKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLP 181 (426)
T ss_pred HhhHHHHHHHHHHHhCCHhHh------------------hHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHH
Confidence 999999999999999999999 99999999999999999988776653 799999875443
Q ss_pred HHHHHHHHHhhcccchhH
Q psy12153 172 FVGFSLFYVWFIPESPLW 189 (236)
Q Consensus 172 ~~~~~~~~~~~~pet~~~ 189 (236)
. +..++.....||++++
T Consensus 182 ~-~~~~~~~~~~p~~~~~ 198 (426)
T PRK12307 182 V-LLVIYIRARAPESKEW 198 (426)
T ss_pred H-HHHHHHHHHCCCChHH
Confidence 3 3333333345776543
No 27
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.74 E-value=8.3e-17 Score=140.55 Aligned_cols=152 Identities=14% Similarity=0.147 Sum_probs=135.0
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFF 94 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 94 (236)
.+.+|+|+ +..+.++..+.+.++..+++++.|+++||+|||+++..+..+.+++.++.+.+++++.+++.|++.|++
T Consensus 28 ~~~~~~g~---s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~ 104 (382)
T PRK10091 28 ELAHDVGI---SIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFP 104 (382)
T ss_pred HHHHHcCC---CHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 45678888 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhH
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLP 171 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~ 171 (236)
.+...+....++.|++++++| ++..+....+..+|..+++.++..+. +||+.|++.++.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~ 166 (382)
T PRK10091 105 HGAFFGVGAIVLSKIIKPGKV------------------TAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVF 166 (382)
T ss_pred hHHHHHHHHHHHHHhCChHHh------------------hHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHH
Confidence 888888888889999998888 88999999999999999888877663 799999998887
Q ss_pred HHHHHHHHHhhcccch
Q psy12153 172 FVGFSLFYVWFIPESP 187 (236)
Q Consensus 172 ~~~~~~~~~~~~pet~ 187 (236)
.++..+...+.+||.+
T Consensus 167 ~~~~~~~~~~~lp~~~ 182 (382)
T PRK10091 167 NIAVLASIYFWVPDIR 182 (382)
T ss_pred HHHHHHHHHHhCCCCC
Confidence 7555555666788864
No 28
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.74 E-value=8.3e-17 Score=139.56 Aligned_cols=153 Identities=20% Similarity=0.291 Sum_probs=136.5
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFF 94 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 94 (236)
.+.+++++ +..+.+++.+.+.++..++.++.|+++||+|||+++..+.++..++.+.....++.+.+.+.|++.|++
T Consensus 30 ~~~~~~g~---s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 106 (385)
T TIGR00710 30 EIAADLST---PASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFG 106 (385)
T ss_pred HHHHHhCC---CHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc
Confidence 34577888 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhH
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLP 171 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~ 171 (236)
.+...+....++.|++|+++| ++..+..+....+|..+++.+++.+. +||+.+++.++.
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~ 168 (385)
T TIGR00710 107 ASAGSVISQALVRDIYPGEEL------------------SRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLA 168 (385)
T ss_pred hhHHHHHHHHHHHHhcCcHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 998889899999999999999 99999999999999999998888763 799999888887
Q ss_pred HHHHHHHHHhhcccchh
Q psy12153 172 FVGFSLFYVWFIPESPL 188 (236)
Q Consensus 172 ~~~~~~~~~~~~pet~~ 188 (236)
.++..+...+..||+++
T Consensus 169 ~~~~~~~~~~~~~~~~~ 185 (385)
T TIGR00710 169 GILLSALIFFILPETLP 185 (385)
T ss_pred HHHHHHHHHHhCCCCCC
Confidence 75666666667788653
No 29
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.73 E-value=6.4e-17 Score=139.17 Aligned_cols=151 Identities=17% Similarity=0.115 Sum_probs=129.9
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFF 94 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 94 (236)
.+.+++|+ +..+.+++.+++.++..+++++.|.++||+|||+++..+.++.+++.+..++.++++.+++.|.+.|++
T Consensus 28 ~~~~~~~~---s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 104 (377)
T TIGR00890 28 PLGRYFGV---GVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLASAG 104 (377)
T ss_pred HHHHHhCC---CHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 45678899 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc---chhHHHHHHHHhH
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF---PNWRDAELVTSLP 171 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~---~~w~~~~~i~~~~ 171 (236)
.+..++.....+.+++| ++| ++..+....+..+|..+++.+...+ .+||+.|++.++.
T Consensus 105 ~~~~~~~~~~~~~~~~~-~~~------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~ 165 (377)
T TIGR00890 105 VGIAYGIALNTAVKWFP-DKR------------------GLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGII 165 (377)
T ss_pred HHHHHHhHHHHHHHHcC-ccc------------------HHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 98888777888888887 568 9999999999999987655444433 2799999998888
Q ss_pred HHHHHHHHHhhcccch
Q psy12153 172 FVGFSLFYVWFIPESP 187 (236)
Q Consensus 172 ~~~~~~~~~~~~pet~ 187 (236)
.++..+...+++++.|
T Consensus 166 ~~~~~~~~~~~~~~~~ 181 (377)
T TIGR00890 166 FLLVIVLGAFLIGYPP 181 (377)
T ss_pred HHHHHHHHHHheecCc
Confidence 8666666666666654
No 30
>PRK09952 shikimate transporter; Provisional
Probab=99.73 E-value=1e-16 Score=142.67 Aligned_cols=136 Identities=24% Similarity=0.308 Sum_probs=115.7
Q ss_pred HHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHH--------HHHHHHHHHHHhhhhhhHHHHHHHH
Q psy12153 36 LYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFP--------VYLILRTMQGFFVQGLQNSTYTLLI 107 (236)
Q Consensus 36 ~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~g~~~~~~~~~~~~~~~ 107 (236)
+.+++..+++++.|+++||+|||++++++.++.++++.++++.+++. .+++.|+++|++.|+.++....++.
T Consensus 72 ~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~ 151 (438)
T PRK09952 72 VGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAV 151 (438)
T ss_pred HHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHH
Confidence 45566789999999999999999999999999999999999999976 4788999999999999999999999
Q ss_pred hhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc-----------chhHHHHHHHHhHHHHHH
Q psy12153 108 ELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF-----------PNWRDAELVTSLPFVGFS 176 (236)
Q Consensus 108 e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~-----------~~w~~~~~i~~~~~~~~~ 176 (236)
|++|+++| +...+..+.+..+|.++++.+...+ .+||.+|++.+++. ++.
T Consensus 152 e~~p~~~r------------------g~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~-l~~ 212 (438)
T PRK09952 152 ESAPKNKK------------------AFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLV-LIA 212 (438)
T ss_pred HhCCCCCC------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHH-HHH
Confidence 99999999 9999999999999988887654432 28999999887765 445
Q ss_pred HHHHhhcccchhHH
Q psy12153 177 LFYVWFIPESPLWK 190 (236)
Q Consensus 177 ~~~~~~~pet~~~~ 190 (236)
++.....||+|++.
T Consensus 213 ~~l~~~~~es~~~~ 226 (438)
T PRK09952 213 LWVRNGMEESAEFE 226 (438)
T ss_pred HHHHHhCCCChhHH
Confidence 55556689998764
No 31
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.73 E-value=3e-18 Score=147.59 Aligned_cols=153 Identities=17% Similarity=0.127 Sum_probs=135.4
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFF 94 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 94 (236)
.+.+++++ +..+.+++.+++.++..++.++.|+++||+|||++++++.++..++.++....++++.+++.|++.|++
T Consensus 20 ~~~~~~g~---s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 96 (379)
T TIGR00881 20 YLVEEIGL---SKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIF 96 (379)
T ss_pred HHHHHhCC---CHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Confidence 45577888 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHH-HHHHhc---chhHHHHHHHHh
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLS-LVSYWF---PNWRDAELVTSL 170 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~-~i~~~~---~~w~~~~~i~~~ 170 (236)
.+...+....++.|++|+++| ++..++.+....+|..+++ .+...+ .+||+.|++.++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~r------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (379)
T TIGR00881 97 QGMGWPPCGRTVTKWFSRSER------------------GTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGI 158 (379)
T ss_pred ccccCCchHHHHHHhcCHhhh------------------eeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHH
Confidence 998889999999999999999 9999999999999999998 454443 279999998888
Q ss_pred HHHHHHHHHHhhcccchh
Q psy12153 171 PFVGFSLFYVWFIPESPL 188 (236)
Q Consensus 171 ~~~~~~~~~~~~~pet~~ 188 (236)
+.++..++..++.||+|+
T Consensus 159 ~~~~~~~~~~~~~~~~~~ 176 (379)
T TIGR00881 159 IAIIVSLICFLLLRDSPQ 176 (379)
T ss_pred HHHHHHHHHheeeCCCcc
Confidence 775666777777888764
No 32
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.73 E-value=1.9e-16 Score=139.12 Aligned_cols=153 Identities=20% Similarity=0.193 Sum_probs=132.2
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFF 94 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 94 (236)
.+.+++++ +..+.++..+.+.++..++.++.|.++||+|||++++++..+..++.......++++.+++.|+++|++
T Consensus 38 ~~~~~~~~---s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~ 114 (406)
T PRK15402 38 AVVEDFNA---GAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIG 114 (406)
T ss_pred HHHHHhCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhH
Confidence 34578888 899999999999999999999999999999999999999999999999988999999999999999999
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhH
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLP 171 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~ 171 (236)
.+...+....++.|.+|+++| .+..+.......+|..++|.++..+. +||+.|++.++.
T Consensus 115 ~~~~~~~~~~~i~~~~~~~~~------------------~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~ 176 (406)
T PRK15402 115 LCFIGAVGYAAIQESFEEADA------------------IKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAAL 176 (406)
T ss_pred hhhHHHHHHHHHHHHhChhHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHH
Confidence 888888888999999999888 78788877777788888888877653 799999988888
Q ss_pred HHHHHHHHHhhcccchh
Q psy12153 172 FVGFSLFYVWFIPESPL 188 (236)
Q Consensus 172 ~~~~~~~~~~~~pet~~ 188 (236)
.++..+...+..||+++
T Consensus 177 ~~~~~~~~~~~~~~~~~ 193 (406)
T PRK15402 177 AALSFFGLWRAMPETAG 193 (406)
T ss_pred HHHHHHHHHHhCCCCCc
Confidence 75555556667788754
No 33
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.73 E-value=8.8e-17 Score=143.80 Aligned_cols=149 Identities=19% Similarity=0.334 Sum_probs=132.1
Q ss_pred eeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHH--hccHHHHHHHHHHHHHhhh
Q psy12153 19 LWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVY--NRSFPVYLILRTMQGFFVQ 96 (236)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~g~~~~ 96 (236)
|+++ +..+.+++.+.+.+++.+++++.|+++||+|||+++.++.++..++.++... ..+.+.+++.|+++|++.+
T Consensus 70 ~~~~---s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~ 146 (465)
T TIGR00894 70 NFKW---SGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQG 146 (465)
T ss_pred CCCC---CHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcc
Confidence 6777 8999999999999999999999999999999999999999998888877654 3567788999999999999
Q ss_pred hhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc----chhHHHHHHHHhHH
Q psy12153 97 GLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF----PNWRDAELVTSLPF 172 (236)
Q Consensus 97 ~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~----~~w~~~~~i~~~~~ 172 (236)
...+....++.|++|+++| ++..++...+..+|..+++.+.+.+ .+||+.|++.+++.
T Consensus 147 ~~~~~~~~~~~~~~~~~~r------------------~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~ 208 (465)
T TIGR00894 147 SVSPATHKIIVKWAPPKER------------------SRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVG 208 (465)
T ss_pred cchhhHHHHHHhcCCHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHH
Confidence 9999999999999999999 9999999999999999999888766 28999999998888
Q ss_pred HHHHHHHHhhcccchh
Q psy12153 173 VGFSLFYVWFIPESPL 188 (236)
Q Consensus 173 ~~~~~~~~~~~pet~~ 188 (236)
++..++.+++.+|+|+
T Consensus 209 ~~~~~~~~~~~~~~p~ 224 (465)
T TIGR00894 209 CAWSLLWFVFPADDPS 224 (465)
T ss_pred HHHHHHHHHHhcCCcc
Confidence 6666666667777775
No 34
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.72 E-value=1.5e-17 Score=143.17 Aligned_cols=155 Identities=15% Similarity=0.191 Sum_probs=146.7
Q ss_pred CCcceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Q psy12153 13 NGEPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQG 92 (236)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 92 (236)
...++++.++ +..+.+.+.+.+.+.+.++.++.|.++||.+.|..+-.+.+++++.+++++++++.+.+.+...++|
T Consensus 52 ~p~l~e~~~l---sk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng 128 (448)
T COG2271 52 MPALIEDGGL---SKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNG 128 (448)
T ss_pred cHHHHHhcCC---CHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 4467788888 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHH--Hhcc---hhHHHHHH
Q psy12153 93 FFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVS--YWFP---NWRDAELV 167 (236)
Q Consensus 93 ~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~--~~~~---~w~~~~~i 167 (236)
..+|...|.+...++.|+++++| |+..++.+.+.++|+.+.+.+. .++. +||..|++
T Consensus 129 ~fQg~Gwpp~~~~i~~Wfsr~eR------------------G~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~ 190 (448)
T COG2271 129 WFQGMGWPPCARTITHWFSRKER------------------GTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYF 190 (448)
T ss_pred HHhcCCCcHHHHHHHHHcCcccc------------------CceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHH
Confidence 99999999999999999999999 9999999999999999999888 6654 89999999
Q ss_pred HHhHHHHHHHHHHhhcccchh
Q psy12153 168 TSLPFVGFSLFYVWFIPESPL 188 (236)
Q Consensus 168 ~~~~~~~~~~~~~~~~pet~~ 188 (236)
.+++.++++++.++..+++|+
T Consensus 191 pgiiaiival~~~~~~rd~Pq 211 (448)
T COG2271 191 PGIIAIIVALILLFLLRDRPQ 211 (448)
T ss_pred HHHHHHHHHHHHHHHhCCCcc
Confidence 999998999999999999986
No 35
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.72 E-value=6.9e-17 Score=144.63 Aligned_cols=152 Identities=20% Similarity=0.226 Sum_probs=137.2
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFF 94 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 94 (236)
.+.+++|. +..+.+++.+.+.++..++.++.|+++||+|||++++++.++..++.++++..++++.+++.|+++|++
T Consensus 27 ~~~~~~g~---s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~ 103 (485)
T TIGR00711 27 TIAGDLGS---SLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFG 103 (485)
T ss_pred HHHHhcCC---ChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHhh
Confidence 45567888 889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhH
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLP 171 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~ 171 (236)
.+...+....++.|++|+++| ++..++......+|..+++.+++.+. +||+.|++.+++
T Consensus 104 ~~~~~~~~~~~i~~~~~~~~r------------------~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~ 165 (485)
T TIGR00711 104 GGPLIPLSFSTLLNIYPPEKR------------------GRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPI 165 (485)
T ss_pred hhhHHHHHHHHHHHHCCHHHH------------------HHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHH
Confidence 999999999999999999999 99999999999999999999988774 799999988887
Q ss_pred HHHHHHHHHhhcccch
Q psy12153 172 FVGFSLFYVWFIPESP 187 (236)
Q Consensus 172 ~~~~~~~~~~~~pet~ 187 (236)
.++..++..+++||++
T Consensus 166 ~~~~~~~~~~~~~~~~ 181 (485)
T TIGR00711 166 GIIVVVVAFFILPRDK 181 (485)
T ss_pred HHHHHHHHHHHcCCcc
Confidence 7566666666777754
No 36
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.72 E-value=3.1e-16 Score=136.04 Aligned_cols=152 Identities=17% Similarity=0.306 Sum_probs=136.0
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFF 94 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 94 (236)
.+.+++|+ +..+.++..+.+.++..++.+++|+++||+|||+++.++.++..++.......++.+.+.+.|++.|++
T Consensus 16 ~~~~~~~~---s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~ 92 (377)
T PRK11102 16 VIAADFGV---SAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGLA 92 (377)
T ss_pred HHHHHhCC---CHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHH
Confidence 44567888 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhH
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLP 171 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~ 171 (236)
.+...+....++.|++|+++| ++..++.+....+|..+++.+++.+. +||+.|++.+++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~ 154 (377)
T PRK11102 93 AAAASVVINALMRDMFPKEEF------------------SRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALA 154 (377)
T ss_pred HHHHHHHHHHHHHHhcCHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 988888889999999999999 99999999999999999998887663 799999888887
Q ss_pred HHHHHHHHHhhcccch
Q psy12153 172 FVGFSLFYVWFIPESP 187 (236)
Q Consensus 172 ~~~~~~~~~~~~pet~ 187 (236)
.++..++..+++||++
T Consensus 155 ~~~~~~~~~~~~~~~~ 170 (377)
T PRK11102 155 AILAAALVFFFIPETL 170 (377)
T ss_pred HHHHHHHHHHhCCccC
Confidence 7555666667778864
No 37
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.71 E-value=3.3e-16 Score=136.93 Aligned_cols=152 Identities=14% Similarity=0.109 Sum_probs=135.1
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFF 94 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 94 (236)
.+.++++. +..+.++..+.+.++..++.++.|+++||+|||+.++.+.++..++.......++.+.+++.|+++|++
T Consensus 28 ~~~~~~~~---s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~ 104 (392)
T PRK10473 28 RIAADLNA---SEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIG 104 (392)
T ss_pred HHHHHhCC---CHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 44567888 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhH
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLP 171 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~ 171 (236)
.+...+....++.|.+|+++| ++..+..+....+|..++|.++..+. +|++.+++.++.
T Consensus 105 ~~~~~~~~~~~i~~~~~~~~r------------------~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~ 166 (392)
T PRK10473 105 AGCCYVVAFAILRDTLDDRRR------------------AKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAM 166 (392)
T ss_pred hhHHHHHHHHHHHHHcCHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHH
Confidence 888888889999999999999 99999999999999999998887653 799999988887
Q ss_pred HHHHHHHHHhhcccch
Q psy12153 172 FVGFSLFYVWFIPESP 187 (236)
Q Consensus 172 ~~~~~~~~~~~~pet~ 187 (236)
.++..++..+.+||++
T Consensus 167 ~~i~~~~~~~~~~~~~ 182 (392)
T PRK10473 167 GILVLLLSLFILKETR 182 (392)
T ss_pred HHHHHHHHHHHcCCCC
Confidence 7666666677788864
No 38
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.71 E-value=3.3e-16 Score=134.29 Aligned_cols=137 Identities=13% Similarity=0.044 Sum_probs=122.2
Q ss_pred eeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhc-----cHHHHHHHHHHHH
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNR-----SFPVYLILRTMQG 92 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~g 92 (236)
.+++. +..+.+++.+++.++..++.++.|+++||+|||++++.+.++..++..+....+ +.+.+++.|++.|
T Consensus 27 ~~~~~---s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 103 (365)
T TIGR00900 27 LAGTG---SASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILA 103 (365)
T ss_pred HHhhc---cHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Confidence 45555 888999999999999999999999999999999999999998888888777766 8999999999999
Q ss_pred HhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHH
Q psy12153 93 FFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTS 169 (236)
Q Consensus 93 ~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~ 169 (236)
++.+...+...+++.|++|+++| ++..+..+....+|..+++.+++.+. +||+.|++.+
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~ 165 (365)
T TIGR00900 104 IAQAFFTPAYQAMLPDLVPEEQL------------------TQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDA 165 (365)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHH------------------HHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 99999999999999999999999 99999999999999999999888763 7999998877
Q ss_pred hHHHHH
Q psy12153 170 LPFVGF 175 (236)
Q Consensus 170 ~~~~~~ 175 (236)
+..++.
T Consensus 166 ~~~~~~ 171 (365)
T TIGR00900 166 VGFAIS 171 (365)
T ss_pred HHHHHH
Confidence 766333
No 39
>KOG2533|consensus
Probab=99.71 E-value=1.2e-16 Score=143.17 Aligned_cols=161 Identities=22% Similarity=0.295 Sum_probs=144.4
Q ss_pred ccccccCCcce---eeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHH
Q psy12153 7 DEIDCVNGEPV---LLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPV 83 (236)
Q Consensus 7 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~ 83 (236)
|....++..+. +|.++ ...+.+.+.++++++++++.++++.+.||++-.+.+....+++.+..++....+|++.
T Consensus 60 d~~si~~a~l~g~~edl~~---~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~ 136 (495)
T KOG2533|consen 60 DKSSIVNASLSGLKEDLKL---VGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPG 136 (495)
T ss_pred chhcchhHHHcCCccccch---hhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 33344444333 67778 8999999999999999999999999999999888888888888888877888999999
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc-----
Q psy12153 84 YLILRTMQGFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF----- 158 (236)
Q Consensus 84 ~~~~~~l~g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~----- 158 (236)
+++.|++.|+.++..+|....+++.++.+++| +..++++.....+|+++|++++..+
T Consensus 137 ~ialr~llGl~es~~wP~~~~~lg~wy~~~e~------------------g~r~~~~~a~~~~g~i~ggliA~g~~~~~~ 198 (495)
T KOG2533|consen 137 LIALRFLLGLFESGGWPGVVAILGNWYGKSER------------------GLRMGIWYASASLGNIFGGLIAYGVFKLNG 198 (495)
T ss_pred HHHHHHHHHHHhcccchHHHHHHHhhcChhhh------------------hhhHHHHHHhcchhhHHHHHHHHHhhhhcC
Confidence 99999999999999999999999999999999 9999999999999999999998883
Q ss_pred ----chhHHHHHHHHhHHHHHHHHHHhhcccchh
Q psy12153 159 ----PNWRDAELVTSLPFVGFSLFYVWFIPESPL 188 (236)
Q Consensus 159 ----~~w~~~~~i~~~~~~~~~~~~~~~~pet~~ 188 (236)
.+|||.|++.+++.++.++++++++|+.|.
T Consensus 199 ~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 199 SGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred CCCcCCceeehhHHHHHHHHHHheEEEEecCChh
Confidence 389999999999998899999999999986
No 40
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.71 E-value=4.2e-16 Score=140.24 Aligned_cols=154 Identities=25% Similarity=0.357 Sum_probs=133.9
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFF 94 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 94 (236)
.+.+++|+ +..+.++..+.+.++..++.++.|+++||+|||++++++.++.+++.+...+.++++.+++.|++.|++
T Consensus 45 ~i~~~~~~---s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~ 121 (496)
T PRK03893 45 EVQGEFGL---TTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMG 121 (496)
T ss_pred HHHHHhCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 34567888 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhH
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLP 171 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~ 171 (236)
.+...+....++.|.+|+++| ++..+.......+|..+++.+...+. +||+.|++..+.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~r------------------~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~ 183 (496)
T PRK03893 122 MAGEYGSSATYVIESWPKHLR------------------NKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILP 183 (496)
T ss_pred HHHHHHHHHHHHHHHcCHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 998889899999999999999 99999999999999999998887764 799998875444
Q ss_pred HHHHHHHHHhhcccchhHH
Q psy12153 172 FVGFSLFYVWFIPESPLWK 190 (236)
Q Consensus 172 ~~~~~~~~~~~~pet~~~~ 190 (236)
. +..++....+||++++.
T Consensus 184 ~-~~~~~~~~~~p~~~~~~ 201 (496)
T PRK03893 184 I-IFALWLRKNLPEAEDWK 201 (496)
T ss_pred H-HHHHHHHHhCCCchhhh
Confidence 3 44444555678876543
No 41
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.71 E-value=3.8e-16 Score=137.04 Aligned_cols=136 Identities=12% Similarity=0.029 Sum_probs=122.1
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFF 94 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 94 (236)
.+.+|+++ +..+.++..+.+.+++.+++++.|+++||+|||++++.+..+.+++....+++++++.+++.|+++|++
T Consensus 34 ~i~~~~~~---s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~Gig 110 (393)
T PRK09705 34 QLRQASGM---SFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGVG 110 (393)
T ss_pred HHHHHhCC---CHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHHHhH
Confidence 56678999 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc----chhHHHHHHHHh
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF----PNWRDAELVTSL 170 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~----~~w~~~~~i~~~ 170 (236)
.+...+....++.+++| ++| +++++....+..+|..+++.+++.+ .+||+.+.+.++
T Consensus 111 ~~~~~~~~~~~~~~~~~-~~~------------------~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~ 171 (393)
T PRK09705 111 IGIIQAVMPSVIKRRFQ-QRT------------------PLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWAL 171 (393)
T ss_pred HHHHhhhhhHHHHHHcc-ccc------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 99888888889999987 678 9999999888888888888777765 379988776665
Q ss_pred HH
Q psy12153 171 PF 172 (236)
Q Consensus 171 ~~ 172 (236)
..
T Consensus 172 ~~ 173 (393)
T PRK09705 172 PA 173 (393)
T ss_pred HH
Confidence 54
No 42
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.70 E-value=4.5e-16 Score=136.19 Aligned_cols=153 Identities=19% Similarity=0.195 Sum_probs=132.9
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFF 94 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 94 (236)
.+.+++|+ +..+.+++.+.+.++..++.+++|+++||+|||++++.+.++..++.+.....++++.+++.|++.|++
T Consensus 33 ~i~~~~~~---s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 109 (394)
T PRK11652 33 DMARDLNV---REGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLG 109 (394)
T ss_pred HHHHHhCC---CHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhh
Confidence 44577888 999999999999999999999999999999999999999999999999888899999999999999999
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhH
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLP 171 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~ 171 (236)
.+...+....+..|.++.++| +...+....+..++..++|.+++.+. +||+.|++.++.
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~ 171 (394)
T PRK11652 110 TGVGGVMARTLPRDLYEGTQL------------------RHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLL 171 (394)
T ss_pred hhHHHHHHHHHHHHhcCHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHH
Confidence 887777777888899888888 88889988999999999988887763 799999988877
Q ss_pred HHHHHHHHHhhcccchh
Q psy12153 172 FVGFSLFYVWFIPESPL 188 (236)
Q Consensus 172 ~~~~~~~~~~~~pet~~ 188 (236)
.++..++..++.||+++
T Consensus 172 ~~~~~~~~~~~~~~~~~ 188 (394)
T PRK11652 172 GAGVTFSMARWMPETRP 188 (394)
T ss_pred HHHHHHHHHHhCCccCc
Confidence 75555666677888753
No 43
>KOG2532|consensus
Probab=99.70 E-value=3.9e-16 Score=139.31 Aligned_cols=152 Identities=22% Similarity=0.303 Sum_probs=138.9
Q ss_pred eeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHHh
Q psy12153 17 VLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNR--SFPVYLILRTMQGFF 94 (236)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~g~~ 94 (236)
..+|++ +..+.+++.+.++.|+++++++.|+++||+|-|+++.++.++.++.+++...+. +++.+++.|+++|++
T Consensus 65 ~~~~~w---s~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~ 141 (466)
T KOG2532|consen 65 AGEYDW---SSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLG 141 (466)
T ss_pred CceecC---CHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHH
Confidence 568889 999999999999999999999999999999999999999999999999998754 455778999999999
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc----hhHHHHHHHHh
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP----NWRDAELVTSL 170 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~----~w~~~~~i~~~ 170 (236)
.|..+|....+.+.|.|+++| ++..++...+..+|.+++..+++++- ||+..|++.++
T Consensus 142 ~g~~~pa~~~i~~~W~P~~Er------------------s~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~ 203 (466)
T KOG2532|consen 142 QGVLFPAIGSILAKWAPPNER------------------STFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGI 203 (466)
T ss_pred HhHHHhhhhceeeeECCHHHH------------------HHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHH
Confidence 999999999999999999999 99999999999999999988888763 89999999999
Q ss_pred HHHHHHHHHHhhcccchhH
Q psy12153 171 PFVGFSLFYVWFIPESPLW 189 (236)
Q Consensus 171 ~~~~~~~~~~~~~pet~~~ 189 (236)
.+++..++.+++..|+|+.
T Consensus 204 ~g~i~~~~w~~~~~d~P~~ 222 (466)
T KOG2532|consen 204 VGLIWFILWFLFYSDSPSK 222 (466)
T ss_pred HHHHHHHHHHHHhcCCccc
Confidence 9977777777888888763
No 44
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.70 E-value=6.8e-17 Score=144.81 Aligned_cols=153 Identities=14% Similarity=0.108 Sum_probs=131.9
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHH-----hccHHHHHHHHH
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVY-----NRSFPVYLILRT 89 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 89 (236)
.+.+|+++ +..+.+++.+.+.+++.+++++.|+++||+|||+++.++.++.++..+..+. +++++.+++.|+
T Consensus 54 ~i~~~~~~---s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 130 (467)
T PRK09556 54 DMISTYGL---STTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWA 130 (467)
T ss_pred HHHHhcCC---CHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHH
Confidence 56688999 9999999999999999999999999999999999998888888777776664 578999999999
Q ss_pred HHHHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc------chhHH
Q psy12153 90 MQGFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF------PNWRD 163 (236)
Q Consensus 90 l~g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~------~~w~~ 163 (236)
++|++.+...+....++.|++|+++| ++..++...+..+|..+++.+..++ .+|+.
T Consensus 131 l~G~~~~~~~~~~~~~i~~~~~~~~r------------------g~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~ 192 (467)
T PRK09556 131 LSGFFQSTGGPCSYSTITRWTPRRKR------------------GRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIG 192 (467)
T ss_pred HHHHHHhccchHHHHHHHHHcCccce------------------eeeEEeeecccchhhhHHHHHHHHHHHhhccCcchh
Confidence 99999998889999999999999999 9999999999999999988776543 15888
Q ss_pred HHHHHHhHHHHHHHHHHhhcccchh
Q psy12153 164 AELVTSLPFVGFSLFYVWFIPESPL 188 (236)
Q Consensus 164 ~~~i~~~~~~~~~~~~~~~~pet~~ 188 (236)
.|.+.+++.++..++.+++.++.|+
T Consensus 193 ~f~~~g~~~~~~~i~~~~~~~~~p~ 217 (467)
T PRK09556 193 MFIFPSIIALIIGFIGLRYGSDSPE 217 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCChh
Confidence 8888888876666666677777764
No 45
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.69 E-value=3.4e-16 Score=135.03 Aligned_cols=151 Identities=18% Similarity=0.101 Sum_probs=123.4
Q ss_pred ceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHh
Q psy12153 16 PVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNR-SFPVYLILRTMQGFF 94 (236)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~ 94 (236)
+.+++|+ +..+.+++.+++.++..++.++.|+++||+|||+.++++.++..++.+...+.+ +++.+++.|+++|++
T Consensus 28 ~~~~~~~---s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~ 104 (366)
T TIGR00886 28 IKDDLGL---STAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIA 104 (366)
T ss_pred HHHHhCC---CHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 5578899 999999999999999999999999999999999999999999999999999988 999999999999998
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc-------------chh
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF-------------PNW 161 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~-------------~~w 161 (236)
.+ ..+....++.|++|+++| +...++......+|..+++.+++.+ .+|
T Consensus 105 ~~-~~~~~~~~~~~~~~~~~r------------------~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w 165 (366)
T TIGR00886 105 GG-SFASCMPWISFFFPKKIQ------------------GTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAW 165 (366)
T ss_pred ch-hhHhHHHHHHHhcCHhhh------------------hHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence 54 455677899999999999 9999988866666666665554432 169
Q ss_pred HHHH-HHHHhHHHHHHHHHHhhcccchh
Q psy12153 162 RDAE-LVTSLPFVGFSLFYVWFIPESPL 188 (236)
Q Consensus 162 ~~~~-~i~~~~~~~~~~~~~~~~pet~~ 188 (236)
|+.+ +..++...+..++..++.+|+|+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (366)
T TIGR00886 166 GWAFVIVPAGILLLPALLIFFVGADTPP 193 (366)
T ss_pred cchhHHHHHHHHHHHHHHHHHhcccCCc
Confidence 9988 44455554555555666677653
No 46
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.68 E-value=9.6e-16 Score=135.23 Aligned_cols=153 Identities=12% Similarity=0.175 Sum_probs=134.8
Q ss_pred cceeeeeeeecCcch-hHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Q psy12153 15 EPVLLWHLYHHECKW-NAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGF 93 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 93 (236)
.+.+|+|+ +..+ .+.+.+++..+++++.+++|+++||+|.|+++.++.+.+.+.+.++++.++...+.+.|++.|+
T Consensus 51 ~L~~elgl---T~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGv 127 (511)
T TIGR00806 51 YLLTVLNF---TEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSV 127 (511)
T ss_pred HHHHHcCC---CHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34568899 8998 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc--hhHHHHH--HHH
Q psy12153 94 FVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP--NWRDAEL--VTS 169 (236)
Q Consensus 94 ~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~--~w~~~~~--i~~ 169 (236)
+.|... ....++..++|+++| +++.++...+..+|.++++++++.+. +||+.+- .+.
T Consensus 128 aEA~~~-A~~syI~~WfP~kER------------------~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Is 188 (511)
T TIGR00806 128 TMAARI-AYSSYIFSLVPPSRY------------------QRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIIS 188 (511)
T ss_pred HHHHHH-HHHHHHHHHCCHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHH
Confidence 999988 889999999999999 99999999999999999999888754 7876443 334
Q ss_pred hHHHHHHHHHHhhcccchhH
Q psy12153 170 LPFVGFSLFYVWFIPESPLW 189 (236)
Q Consensus 170 ~~~~~~~~~~~~~~pet~~~ 189 (236)
..+..++++..+++|..++.
T Consensus 189 l~s~~~a~~~a~~LP~~~~s 208 (511)
T TIGR00806 189 LVFMTFSVFLALFLKRPKRS 208 (511)
T ss_pred HHHHHHHHHHHHhCCCCchh
Confidence 44446777888888965443
No 47
>PRK11043 putative transporter; Provisional
Probab=99.67 E-value=1.7e-15 Score=132.88 Aligned_cols=150 Identities=19% Similarity=0.196 Sum_probs=126.7
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFF 94 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 94 (236)
.+.+++++ +..+.++..+++.++..++++++|+++||+|||++++.+.++..++.+...+.++++.+++.|+++|++
T Consensus 31 ~i~~~~~~---s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~ 107 (401)
T PRK11043 31 AIQADLQT---SASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVG 107 (401)
T ss_pred HHHHHHCC---CHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 34567888 999999999999999999999999999999999999999999999999889999999999999999998
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhH
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLP 171 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~ 171 (236)
.+...+....++.|.++++++ ++..+.......+|..++|.+++.+. +||+.|++.++.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~ 169 (401)
T PRK11043 108 VCSAAVIWQALVIDRYPAQKA------------------NRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAI 169 (401)
T ss_pred hHHHHHHHHHHHHHhcCcHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Confidence 877777778889999998888 77777777777888888888877663 899999888877
Q ss_pred HHHHHHHHHhhcccc
Q psy12153 172 FVGFSLFYVWFIPES 186 (236)
Q Consensus 172 ~~~~~~~~~~~~pet 186 (236)
.++..+ ..++++|+
T Consensus 170 ~~~~~~-~~~~~~~~ 183 (401)
T PRK11043 170 TLLLIL-PTLRLKPS 183 (401)
T ss_pred HHHHHH-HHHHcCCC
Confidence 744444 34445554
No 48
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.67 E-value=2.2e-15 Score=135.59 Aligned_cols=151 Identities=14% Similarity=0.085 Sum_probs=122.4
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFF 94 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 94 (236)
.+.+++++ +..+.+++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.++.++.++.+.+++.|++.|++
T Consensus 61 ~l~~~~gl---s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~ 137 (476)
T PLN00028 61 IIRDNLNL---TKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFS 137 (476)
T ss_pred HHHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 44568888 899999999999999999999999999999999999999999999999899999999999999999998
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc------------chhH
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF------------PNWR 162 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~------------~~w~ 162 (236)
.+... ....++.|++|+++| +.+.++......+|..+++.+.+.+ .+||
T Consensus 138 ~~~~~-~~~~~i~~~~~~~~r------------------g~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr 198 (476)
T PLN00028 138 LATFV-SCQYWMSTMFNGKIV------------------GTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWR 198 (476)
T ss_pred HHhhH-HHHHHHHHhcChhhe------------------eHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhH
Confidence 77543 355678999999999 9999988766666666655444322 2799
Q ss_pred HHHHHHHhHHHHHHHHHHhhcccch
Q psy12153 163 DAELVTSLPFVGFSLFYVWFIPESP 187 (236)
Q Consensus 163 ~~~~i~~~~~~~~~~~~~~~~pet~ 187 (236)
+.|++.+++.++..++..++.++.|
T Consensus 199 ~~f~i~g~l~l~~~l~~~~~~~~~p 223 (476)
T PLN00028 199 IAFFVPGLLHIIMGILVLTLGQDLP 223 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcCC
Confidence 9999999888555555555544444
No 49
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.67 E-value=1.5e-15 Score=135.70 Aligned_cols=152 Identities=16% Similarity=0.138 Sum_probs=126.9
Q ss_pred ceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHh----ccHHHHHHHHHHH
Q psy12153 16 PVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYN----RSFPVYLILRTMQ 91 (236)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~ 91 (236)
+.++ ++ +..+.++..+++.++..+++++.|+++||+|||++++++.++.+++.+..++. .+.+.+++.|++.
T Consensus 55 l~~~-g~---s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~ 130 (452)
T PRK11273 55 LVEQ-GF---SRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLC 130 (452)
T ss_pred HHHc-CC---CHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHH
Confidence 3445 77 89999999999999999999999999999999999999999999888887764 3677888999999
Q ss_pred HHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHH-HHHHHHHh---cchhHHHHHH
Q psy12153 92 GFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLV-MLSLVSYW---FPNWRDAELV 167 (236)
Q Consensus 92 g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-l~~~i~~~---~~~w~~~~~i 167 (236)
|++.+...+.....+.|++|+++| ++..++.+.+..+|.. .++.+... ..+||+.|++
T Consensus 131 gi~~g~~~~~~~~~~~~~~~~~~r------------------~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i 192 (452)
T PRK11273 131 GWFQGMGWPPCGRTMVHWWSQKER------------------GGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYM 192 (452)
T ss_pred HHHHhccchHHHHHHHHhCChHHH------------------HHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHH
Confidence 999888888777888999999999 9999999998888864 44443222 2389999999
Q ss_pred HHhHHHHHHHHHHhhcccchhH
Q psy12153 168 TSLPFVGFSLFYVWFIPESPLW 189 (236)
Q Consensus 168 ~~~~~~~~~~~~~~~~pet~~~ 189 (236)
.+++.++..++..+++||+|+.
T Consensus 193 ~~~~~~~~~~l~~~~~~~~~~~ 214 (452)
T PRK11273 193 PAFAAILVALFAFAMMRDTPQS 214 (452)
T ss_pred HHHHHHHHHHHHHHHccCCHhh
Confidence 8888766677777888998753
No 50
>PRK12382 putative transporter; Provisional
Probab=99.66 E-value=3.3e-15 Score=130.66 Aligned_cols=135 Identities=18% Similarity=0.138 Sum_probs=113.5
Q ss_pred eeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHH---H-----hccHHHHHHHH
Q psy12153 17 VLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIV---Y-----NRSFPVYLILR 88 (236)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~---~-----~~~~~~~~~~~ 88 (236)
.+|+|+ +..+.++..+.+.++..++++++|+++||+|||++++.+.+...++.+... . .++++.+++.|
T Consensus 43 ~~~lg~---s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 119 (392)
T PRK12382 43 HHDLGF---GNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGR 119 (392)
T ss_pred HHhcCC---cHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHH
Confidence 467888 999999999999999999999999999999999999998887766544322 1 24678889999
Q ss_pred HHHHHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHH
Q psy12153 89 TMQGFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAE 165 (236)
Q Consensus 89 ~l~g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~ 165 (236)
+++|++.+...+....++.|.+|+++| +++.+..+.+..+|..+++.+++.+. +|+..+
T Consensus 120 ~l~G~~~~~~~~~~~~~~~~~~~~~~r------------------~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~ 181 (392)
T PRK12382 120 LILGFGESQLLTGALTWGLGLVGPKHS------------------GKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALA 181 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCcccc------------------chhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHH
Confidence 999999988888888899999999999 99999999999999999998887763 788766
Q ss_pred HHHHhHH
Q psy12153 166 LVTSLPF 172 (236)
Q Consensus 166 ~i~~~~~ 172 (236)
.+..+..
T Consensus 182 ~~~~~~~ 188 (392)
T PRK12382 182 LTTMVLP 188 (392)
T ss_pred HHHHHHH
Confidence 6554443
No 51
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.66 E-value=2.5e-15 Score=129.98 Aligned_cols=151 Identities=17% Similarity=0.145 Sum_probs=121.1
Q ss_pred eeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHH-HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh
Q psy12153 17 VLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIML-ISFYGQGAISIAIVYNRSFPVYLILRTMQGFFV 95 (236)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~ 95 (236)
.+++|. +..+.+++.+.+.+...+.+++.|.++||+|||+.++ .+..+..++..+...+++++.+++.|++.|.+.
T Consensus 25 ~~~~g~---s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 101 (375)
T TIGR00899 25 SEEVRA---RPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVLLSSFA 101 (375)
T ss_pred HcccCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhhh
Confidence 457888 9999999999999999999999999999999888765 455555667777788899998888899888777
Q ss_pred hhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhh--HHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHh
Q psy12153 96 QGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGV--AWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSL 170 (236)
Q Consensus 96 ~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~ 170 (236)
+...+....+..|..+++.| +.. .+......++|..+++.+++.+. +||+.|++.++
T Consensus 102 ~~~~p~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~ 163 (375)
T TIGR00899 102 STANPQLFALAREHADRTGR------------------EAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAAL 163 (375)
T ss_pred hhhHHHHHHHHHHHhhhcch------------------hhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHH
Confidence 77777777888888877666 433 56667777888888888877663 79999999888
Q ss_pred HHHHHHHHHHhhcccchh
Q psy12153 171 PFVGFSLFYVWFIPESPL 188 (236)
Q Consensus 171 ~~~~~~~~~~~~~pet~~ 188 (236)
+.++..++..+++||.|+
T Consensus 164 ~~~~~~~~~~~~~~~~~~ 181 (375)
T TIGR00899 164 AFVLCGVLVWLFLPSYPR 181 (375)
T ss_pred HHHHHHHHHHHhCCCccc
Confidence 775566666677898764
No 52
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.66 E-value=3.9e-15 Score=131.00 Aligned_cols=149 Identities=17% Similarity=0.156 Sum_probs=131.1
Q ss_pred eeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhh
Q psy12153 17 VLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQ 96 (236)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~ 96 (236)
++++++ +..+.++..+...+...+..++.|.++||+|||+++.++.++..++.+.....++.+.+.+.|+++|++.+
T Consensus 38 ~~~~g~---s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~ 114 (400)
T PRK11646 38 VDQLGW---AAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGT 114 (400)
T ss_pred HHHhCC---cHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 456777 99999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred hhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc--hhHHHHHHHHhHHHH
Q psy12153 97 GLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP--NWRDAELVTSLPFVG 174 (236)
Q Consensus 97 ~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~--~w~~~~~i~~~~~~~ 174 (236)
...+...+++.|.+|+++| ++..+.......+|..++|.+++.+. +|++.|++.++..++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~------------------~~a~~~~~~~~~~g~~ig~~l~g~l~~~g~~~~f~~~~~~~~~ 176 (400)
T PRK11646 115 LFDPPRTALVIKLIRPHQR------------------GRFFSLLMMQDSAGAVIGALLGSWLLQYDFRLVCATGAVLFVL 176 (400)
T ss_pred HHHHHHHHHHHHhcCHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 8888888999999999999 99999999999999999998888764 789999888777645
Q ss_pred HHHHHHhhcccc
Q psy12153 175 FSLFYVWFIPES 186 (236)
Q Consensus 175 ~~~~~~~~~pet 186 (236)
..++..++.||.
T Consensus 177 ~~i~~~~~~~~~ 188 (400)
T PRK11646 177 AAAFNAWLLPAY 188 (400)
T ss_pred HHHHHHHhCCcc
Confidence 555555566763
No 53
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.66 E-value=1.1e-15 Score=135.90 Aligned_cols=150 Identities=12% Similarity=0.136 Sum_probs=128.1
Q ss_pred eeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHh----ccHHHHHHHHHHHHHh
Q psy12153 19 LWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYN----RSFPVYLILRTMQGFF 94 (236)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~g~~ 94 (236)
++|+ +..+.+++.+++.++..++.++.|+++||+|||+.++.+.++.+++.+..... ++...+.+.|++.|++
T Consensus 55 ~~g~---s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~ 131 (438)
T TIGR00712 55 EQGF---SKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWF 131 (438)
T ss_pred HcCC---CHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHH
Confidence 4577 89999999999999999999999999999999999999988888888876653 4566778889999999
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHh-c---chhHHHHHHHHh
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYW-F---PNWRDAELVTSL 170 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~-~---~~w~~~~~i~~~ 170 (236)
.+..++.....+.|++|+++| ++..++.+....+|..+++.+... + .+||..|++.++
T Consensus 132 ~g~~~~~~~~~i~~~~~~~~r------------------g~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~ 193 (438)
T TIGR00712 132 QGMGWPPCGRTMVHWWSQSER------------------GTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAI 193 (438)
T ss_pred hhcchHHHHHHHHHhcCcccc------------------hhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 888888888899999999999 999999999999999888766543 2 379999999888
Q ss_pred HHHHHHHHHHhhcccchhH
Q psy12153 171 PFVGFSLFYVWFIPESPLW 189 (236)
Q Consensus 171 ~~~~~~~~~~~~~pet~~~ 189 (236)
..++..++..+++||+|+.
T Consensus 194 ~~~i~~~~~~~~~~~~~~~ 212 (438)
T TIGR00712 194 CAIIVALFAFAMMRDTPQS 212 (438)
T ss_pred HHHHHHHHHHHhccCCHHh
Confidence 8866667777788988753
No 54
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.66 E-value=2.2e-15 Score=132.35 Aligned_cols=147 Identities=16% Similarity=0.146 Sum_probs=121.6
Q ss_pred eeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhh
Q psy12153 17 VLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQ 96 (236)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~ 96 (236)
..+++. +..+.+++.+.+.+.+.++.+++|+++||+|||++++++.++..++.+.+....+. ++.|+++|++.+
T Consensus 30 ~~~~~~---s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a 103 (393)
T PRK11195 30 LKELHY---PDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAA 103 (393)
T ss_pred HHHcCC---cHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH
Confidence 356666 78889999999999999999999999999999999999999988888776665553 678999999999
Q ss_pred hhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcchh--HHHHHHHHhHHHH
Q psy12153 97 GLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFPNW--RDAELVTSLPFVG 174 (236)
Q Consensus 97 ~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~~w--~~~~~i~~~~~~~ 174 (236)
...|...+++.|++|+++| +++++..+....+|.++||.+++.+..| +..+.+.+... +
T Consensus 104 ~~~pa~~a~i~~~~~~~~~------------------~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~~~~~~~i~~~~~-~ 164 (393)
T PRK11195 104 AYSPAKYGILTELLPGEKL------------------VKANGWMEGSTIAAILLGTVLGGALADPHAEAALAVCALIY-L 164 (393)
T ss_pred HHHHHHHHHHHHHcCHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 9999999999999999999 9999999999999999999999888654 44444443333 3
Q ss_pred HHHHHHhhcccchh
Q psy12153 175 FSLFYVWFIPESPL 188 (236)
Q Consensus 175 ~~~~~~~~~pet~~ 188 (236)
...+..+.+||+|+
T Consensus 165 ~~~~~~~~l~~~~~ 178 (393)
T PRK11195 165 LAALFNLFIPRLGA 178 (393)
T ss_pred HHHHHHhcCCCCcc
Confidence 34455567888754
No 55
>KOG2615|consensus
Probab=99.65 E-value=9.8e-16 Score=130.25 Aligned_cols=144 Identities=17% Similarity=0.359 Sum_probs=117.5
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhhHHHHHH
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQNSTYTL 105 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 105 (236)
+....|++.+.|++...+.++.+|.++||+|||++++++.++.++...+.+.+.|+..++..|++.|+..|.. .+.-++
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl-~v~rAi 144 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNL-SVIRAI 144 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCch-HHHHHH
Confidence 4556799999999999999999999999999999999999999999999999999977777799999998665 557899
Q ss_pred HHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcchh-----HHHH----HHHHhHHHHHH
Q psy12153 106 LIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFPNW-----RDAE----LVTSLPFVGFS 176 (236)
Q Consensus 106 ~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~~w-----~~~~----~i~~~~~~~~~ 176 (236)
++|+.++|+| +..++.....+.+|.++||.+++++... +.+| ++..+....-.
T Consensus 145 isdV~sek~r------------------~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v 206 (451)
T KOG2615|consen 145 ISDVVSEKYR------------------PLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDV 206 (451)
T ss_pred HHhhcChhhc------------------cceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHH
Confidence 9999999999 9999999999999999999999988530 1112 22222221223
Q ss_pred HHHHhhcccchh
Q psy12153 177 LFYVWFIPESPL 188 (236)
Q Consensus 177 ~~~~~~~pet~~ 188 (236)
....+++|||-.
T Consensus 207 ~~~~~~lpETL~ 218 (451)
T KOG2615|consen 207 TFFPWFLPETLP 218 (451)
T ss_pred HHHHHhCCcccc
Confidence 445667899854
No 56
>KOG0253|consensus
Probab=99.65 E-value=1.8e-15 Score=128.31 Aligned_cols=169 Identities=21% Similarity=0.361 Sum_probs=147.3
Q ss_pred eeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhh
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQG 97 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 97 (236)
..|++ +..+.++++...+.+..+++..+|.++|++|||+.+.+.....++..++.+.++|+..+++.|.+.|++.|+
T Consensus 106 ~~w~~---s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg 182 (528)
T KOG0253|consen 106 EVWGP---SEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGG 182 (528)
T ss_pred hhhch---hhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCC
Confidence 46787 888999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred hhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhHHHH
Q psy12153 98 LQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLPFVG 174 (236)
Q Consensus 98 ~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~~~~ 174 (236)
.|...++..|..|...| ....-.. ..|.+|.+....++.... ||||.+...+.+. .
T Consensus 183 -~pv~~~~yle~lp~~~r------------------~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl-~ 241 (528)
T KOG0253|consen 183 -LPVDSAIYLEFLPSSHR------------------WLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPL-M 241 (528)
T ss_pred -ccHhHHHHHHhccCcCC------------------CcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHH-H
Confidence 88889999999999988 5555444 888899988887777664 8999888777555 6
Q ss_pred HHHHHHhhcccchhHHHhcCCHhHHHHHHHHhhhhc
Q psy12153 175 FSLFYVWFIPESPLWKYTKNKIIDFEYLCDDESHRE 210 (236)
Q Consensus 175 ~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~ 210 (236)
......+++|||||+...+++.+++...+++.++.+
T Consensus 242 ~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmN 277 (528)
T KOG0253|consen 242 FAARFLVWVYESPRFYLAKGDDYKALETLHKIARMN 277 (528)
T ss_pred HHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhc
Confidence 666778889999999999999999888887766543
No 57
>PRK10054 putative transporter; Provisional
Probab=99.65 E-value=3.4e-15 Score=131.22 Aligned_cols=149 Identities=11% Similarity=0.079 Sum_probs=128.0
Q ss_pred eeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhh
Q psy12153 17 VLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQ 96 (236)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~ 96 (236)
.+++|+ +..+.++..+.+.++..+++++.|+++||+|||++++++.++..++.....+.++++.+++.+.+.|.+.+
T Consensus 35 ~~~~g~---s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 111 (395)
T PRK10054 35 SRQYSL---SVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYS 111 (395)
T ss_pred HHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 356788 99999999999999999999999999999999999999999998988888888998888888888887777
Q ss_pred hhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc--hhHHHHHHHHhHHHH
Q psy12153 97 GLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP--NWRDAELVTSLPFVG 174 (236)
Q Consensus 97 ~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~--~w~~~~~i~~~~~~~ 174 (236)
...+....+..|..|+++| ++..++.....++|..++|.+++.+. +|+..|++.++..++
T Consensus 112 ~~~~~~~~~~~~~~~~~~~------------------~~~~g~~~~~~~lg~~igp~l~~~l~~~g~~~~f~~~~~~~~i 173 (395)
T PRK10054 112 VFSTVLKAWFADNLSSTSK------------------TKIFSLNYTMLNIGWTVGPPLGTLLVMQSINLPFWLAAICSAF 173 (395)
T ss_pred HHHHHHHHHHHHhcCHhHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHH
Confidence 7777788899999998888 99999999999999999999888764 799999888777644
Q ss_pred HHHHHHhhcccc
Q psy12153 175 FSLFYVWFIPES 186 (236)
Q Consensus 175 ~~~~~~~~~pet 186 (236)
..++..+++||+
T Consensus 174 ~~i~~~~~~~~~ 185 (395)
T PRK10054 174 PLVFIQIWVQRS 185 (395)
T ss_pred HHHHHHHHHhcc
Confidence 445555556665
No 58
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.65 E-value=5.6e-15 Score=130.52 Aligned_cols=143 Identities=10% Similarity=0.112 Sum_probs=124.0
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHH---hccHHHHHHHHHHH
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVY---NRSFPVYLILRTMQ 91 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~ 91 (236)
.+++++|+ +..+.+++.+.+.+++.+++++.|++.||+|||++++++.++.+++..+... .++++.+++.|++.
T Consensus 28 ~~~~~~~~---s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~ 104 (410)
T TIGR00885 28 QFQQAFTL---TAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFIL 104 (410)
T ss_pred HHHHHhCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHH
Confidence 45678898 9999999999999999999999999999999999999999999998887543 46889999999999
Q ss_pred HHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc-------------
Q psy12153 92 GFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF------------- 158 (236)
Q Consensus 92 g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~------------- 158 (236)
|++.+...+....++.+..|+++| ++..+..+...++|..+++.+...+
T Consensus 105 G~g~g~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~ 166 (410)
T TIGR00885 105 TAGLGFLETAANPYILVMGPESTA------------------TRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVL 166 (410)
T ss_pred HhhHHHHHhhhhHHHHHHCCHhHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhh
Confidence 999999999999999999998888 8889999999999999998877654
Q ss_pred ----------------chhHHHHHHHHhHHHHHHHH
Q psy12153 159 ----------------PNWRDAELVTSLPFVGFSLF 178 (236)
Q Consensus 159 ----------------~~w~~~~~i~~~~~~~~~~~ 178 (236)
.+||++|++.+++.++..++
T Consensus 167 ~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~ 202 (410)
T TIGR00885 167 DKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALL 202 (410)
T ss_pred hhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 14999998888876444333
No 59
>PRK03699 putative transporter; Provisional
Probab=99.65 E-value=2.9e-15 Score=131.36 Aligned_cols=141 Identities=10% Similarity=0.149 Sum_probs=124.2
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFF 94 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 94 (236)
.+.+++|+ +..+.+++.+.+.++..+++++.|+++||+|||++++++.++..++..+..+.++++.+++.|++.|++
T Consensus 32 ~i~~~~~~---s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~ 108 (394)
T PRK03699 32 PIAEYFNL---PVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGVV 108 (394)
T ss_pred HHHHHhCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHh
Confidence 45678889 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc----chhHHHHHHHHh
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF----PNWRDAELVTSL 170 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~----~~w~~~~~i~~~ 170 (236)
.+...+....++.|.+|+++| +...+..+....+|..++|.+.+.+ .+||+.|.+.++
T Consensus 109 ~g~~~~~~~~~i~~~~~~~~r------------------~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~ 170 (394)
T PRK03699 109 SGITMSIGTFLITHVYEGKQR------------------GSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGL 170 (394)
T ss_pred hHhhccchhHHhhhhcccchH------------------HHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHH
Confidence 888888888899999998888 8888888888888888888776654 279999998887
Q ss_pred HHHHHH
Q psy12153 171 PFVGFS 176 (236)
Q Consensus 171 ~~~~~~ 176 (236)
+.++..
T Consensus 171 ~~~~~~ 176 (394)
T PRK03699 171 VYVAIF 176 (394)
T ss_pred HHHHHH
Confidence 764433
No 60
>PRK15075 citrate-proton symporter; Provisional
Probab=99.64 E-value=5.6e-15 Score=131.20 Aligned_cols=152 Identities=20% Similarity=0.218 Sum_probs=113.8
Q ss_pred cceeeeeeeecCcchhHH-HHHHH-----HHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHH------
Q psy12153 15 EPVLLWHLYHHECKWNAA-VVTLY-----FLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFP------ 82 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~-~~~~~-----~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~------ 82 (236)
.+.+|++. +..+.+. ..+.. .++..+++++.|+++||+|||+.++.+.++..++..+++++++++
T Consensus 40 ~i~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~ 116 (434)
T PRK15075 40 AIAKTFFP---AGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAFVPGYATIGLAA 116 (434)
T ss_pred HHHHHhCC---CCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHH
Confidence 45567777 5554432 22222 233357889999999999999999999999999999999998876
Q ss_pred --HHHHHHHHHHHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc--
Q psy12153 83 --VYLILRTMQGFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF-- 158 (236)
Q Consensus 83 --~~~~~~~l~g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~-- 158 (236)
.+++.|+++|++.+...+....++.|++|+++| ++..++......+|..+++.++..+
T Consensus 117 ~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~r------------------g~~~~~~~~~~~~g~~~g~~~g~~l~~ 178 (434)
T PRK15075 117 PLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRK------------------GFYTSWQSASQQVAVVFAALLGYLLNQ 178 (434)
T ss_pred HHHHHHHHHHhhccccccHHHHHHHHHhhCCcccc------------------hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 368899999999998888888999999999999 9999988887777776666655543
Q ss_pred ---------chhHHHHHHHHhHHHHHHHHHHhhcccchh
Q psy12153 159 ---------PNWRDAELVTSLPFVGFSLFYVWFIPESPL 188 (236)
Q Consensus 159 ---------~~w~~~~~i~~~~~~~~~~~~~~~~pet~~ 188 (236)
.+||++|++..+.. +...+.....||+++
T Consensus 179 ~~~~~~~~~~gWr~~f~~~~~~~-~~~~~~~~~~~e~~~ 216 (434)
T PRK15075 179 WLSPAQMAEWGWRIPFLIGCLIV-PFIFLIRRSLEETEE 216 (434)
T ss_pred hCCHHHHhccchHHHHHHHHHHH-HHHHHHHHhcCCCHH
Confidence 28999998754433 333333344566543
No 61
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.64 E-value=4.3e-15 Score=130.09 Aligned_cols=135 Identities=15% Similarity=0.071 Sum_probs=114.7
Q ss_pred eeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHh---c-----cHHHHHHHH
Q psy12153 17 VLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYN---R-----SFPVYLILR 88 (236)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~---~-----~~~~~~~~~ 88 (236)
.+++++ +..+.+++.+++.++..+++++.|+++||+|||++++.+.++.+++....... + ++..+++.|
T Consensus 43 ~~~~g~---s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 119 (399)
T PRK05122 43 HDQLGF---SAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGR 119 (399)
T ss_pred HHhcCc---cHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHH
Confidence 457788 89999999999999999999999999999999999999998887766654432 2 456788999
Q ss_pred HHHHHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHH
Q psy12153 89 TMQGFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAE 165 (236)
Q Consensus 89 ~l~g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~ 165 (236)
+++|++.+...+....++.|..|+++| ++..+..+....+|..+++.++..+. +|+..+
T Consensus 120 ~l~G~~~~~~~~~~~~~~~~~~~~~~r------------------~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~ 181 (399)
T PRK05122 120 LLLGIGESLAGTGSILWGIGRVGALHT------------------GRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLG 181 (399)
T ss_pred HHHHhhHHhhcchHHHHHHhhcChhhh------------------ccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHH
Confidence 999999998888888899999999999 99999988888888888888877663 788887
Q ss_pred HHHHhHH
Q psy12153 166 LVTSLPF 172 (236)
Q Consensus 166 ~i~~~~~ 172 (236)
++..+..
T Consensus 182 ~~~~~~~ 188 (399)
T PRK05122 182 LLIMLLA 188 (399)
T ss_pred HHHHHHH
Confidence 7666554
No 62
>PRK10504 putative transporter; Provisional
Probab=99.64 E-value=6.4e-15 Score=131.87 Aligned_cols=151 Identities=15% Similarity=0.092 Sum_probs=131.6
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFF 94 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 94 (236)
.+.+++|+ +..+.+++.+.+.++..++.+++|+++||+|||++++.+.++..++.+...+.++.+.+++.|+++|++
T Consensus 35 ~~~~~~g~---s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~ 111 (471)
T PRK10504 35 SMAQSLGE---SPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLARVLQGVG 111 (471)
T ss_pred HHHHHhCc---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhh
Confidence 44567888 889999999999999999999999999999999999999988888888888889999999999999999
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhH
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLP 171 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~ 171 (236)
.+...+....++.|.+|+++| +...+.......+|..++|.+++.+. +||+.|.+....
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~ 173 (471)
T PRK10504 112 GAMMVPVGRLTVMKIVPREQY------------------MAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPV 173 (471)
T ss_pred hHHHHHHHHHHHHHHcCHHHH------------------HHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHH
Confidence 999999899999999999999 99999999999999999999887763 799999988777
Q ss_pred HHHHHHHHHhhcccc
Q psy12153 172 FVGFSLFYVWFIPES 186 (236)
Q Consensus 172 ~~~~~~~~~~~~pet 186 (236)
..+..+......|+.
T Consensus 174 ~~l~~~~~~~~~~~~ 188 (471)
T PRK10504 174 GIIGAIATLMLMPNY 188 (471)
T ss_pred HHHHHHHHHHhCCCc
Confidence 645555555555654
No 63
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.63 E-value=1.2e-14 Score=131.09 Aligned_cols=162 Identities=14% Similarity=0.178 Sum_probs=115.9
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHH---HHHhccHHHHHHHHHHHHHhhhhhhHHH
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIA---IVYNRSFPVYLILRTMQGFFVQGLQNST 102 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 102 (236)
+..+.++......++..++.+..|+++||+|||++++++.++..+.... ....++...+++++++.|++.+...+..
T Consensus 284 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~ 363 (490)
T PRK10642 284 SEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVM 363 (490)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666777778888899999999999999999999988877654433322 2223456677778888888776666777
Q ss_pred HHHHHhhcCccccccccchhhhhhccccccchhhHHH-HHHHHHHHHHHHHHHHHhcc----hhHHHHHHHHhHHHHHHH
Q psy12153 103 YTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWV-TEICWTVGLVMLSLVSYWFP----NWRDAELVTSLPFVGFSL 177 (236)
Q Consensus 103 ~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~l~~~i~~~~~----~w~~~~~i~~~~~~~~~~ 177 (236)
..++.|.+|++.| +...+. .+++ .+++.++|.+.+++. +|+.++++..++. ++.+
T Consensus 364 ~~~~~~~~p~~~R------------------g~~~g~~~~~~-~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~-~i~~ 423 (490)
T PRK10642 364 ASTLPAMFPTHIR------------------YSALAAAFNIS-VLVAGLTPTLAAWLVESTQNLMMPAYYLMVVA-VIGL 423 (490)
T ss_pred HHHHHHHCCCccc------------------hHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCCchHHHHHHHHHH-HHHH
Confidence 7888899999999 887776 4544 455566776666542 4666666655555 4455
Q ss_pred HHHhhcccchhHHHhc-----CCHhHHHHHHHHhh
Q psy12153 178 FYVWFIPESPLWKYTK-----NKIIDFEYLCDDES 207 (236)
Q Consensus 178 ~~~~~~pet~~~~~~~-----~~~~~~~~~~~~~~ 207 (236)
+..+++||||++..++ ++.+|+.+.+.+.+
T Consensus 424 ~~~~~~pes~~~~~~~~~~~~~~~~~a~~~l~~~~ 458 (490)
T PRK10642 424 ITGVTMKETANRPLKGATPAASDIQEAKEILVEHY 458 (490)
T ss_pred HHHHHhccccCCCCCCccccccchhhHHHHhhccc
Confidence 5566779999987654 77777777766554
No 64
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.63 E-value=2e-14 Score=128.00 Aligned_cols=147 Identities=12% Similarity=0.048 Sum_probs=123.5
Q ss_pred eeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHH
Q psy12153 19 LWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYN-----RSFPVYLILRTMQGF 93 (236)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~g~ 93 (236)
++++ +..+.+++.+++.+++.++.++.|++.||+|+|+++.++.++..+.++..++. ++++.+++.|++.|+
T Consensus 64 ~~~l---s~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gi 140 (462)
T PRK15034 64 GFNF---TTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGF 140 (462)
T ss_pred hcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHH
Confidence 7899 99999999999999999999999999999999999999999999999988876 799999999999999
Q ss_pred hhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc--------------
Q psy12153 94 FVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP-------------- 159 (236)
Q Consensus 94 ~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~-------------- 159 (236)
+ +..++.....+++++|+++| |++.++.....++|..+++.+.+.+.
T Consensus 141 g-g~~f~~~~~~vs~wfp~~~r------------------G~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~ 201 (462)
T PRK15034 141 A-GANFASSMGNISFFFPKAKQ------------------GSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVP 201 (462)
T ss_pred H-HHhHHHHHHHHHHHCCHhHh------------------HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 8 67888899999999999999 99999997777777766655544321
Q ss_pred -------hhHHHHHHHHhHHHHHHHHHHhhcccch
Q psy12153 160 -------NWRDAELVTSLPFVGFSLFYVWFIPESP 187 (236)
Q Consensus 160 -------~w~~~~~i~~~~~~~~~~~~~~~~pet~ 187 (236)
+|+.+.++..++.++..++.+++.++.|
T Consensus 202 ~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~ 236 (462)
T PRK15034 202 QADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIA 236 (462)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 2677777777777566666666666543
No 65
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.62 E-value=1.1e-14 Score=125.93 Aligned_cols=132 Identities=26% Similarity=0.358 Sum_probs=109.5
Q ss_pred HHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHH--------HHHHHHHHHHHhhhhhhHHHHHHHHhhc
Q psy12153 39 LGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFP--------VYLILRTMQGFFVQGLQNSTYTLLIELF 110 (236)
Q Consensus 39 l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~g~~~~~~~~~~~~~~~e~~ 110 (236)
++..+++++.|+++||+|||++++.+.++..++..+.++.++++ .+++.|+++|++.+...+....++.|++
T Consensus 46 ~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~ 125 (394)
T TIGR00883 46 LARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYA 125 (394)
T ss_pred HHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcC
Confidence 34457899999999999999999999999999999999888765 4778899999999888888899999999
Q ss_pred CccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc-----------chhHHHHHHHHhHHHHHHHHH
Q psy12153 111 PTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF-----------PNWRDAELVTSLPFVGFSLFY 179 (236)
Q Consensus 111 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~-----------~~w~~~~~i~~~~~~~~~~~~ 179 (236)
++++| +...+..+.+..+|.++++.+...+ .+||+.|++.++.. +...+.
T Consensus 126 ~~~~r------------------~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~-~~~~~~ 186 (394)
T TIGR00883 126 PPGKR------------------GFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLV-LIGLYL 186 (394)
T ss_pred Ccccc------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHH-HHHHHH
Confidence 99999 9999999999999999988776543 26999988776665 444555
Q ss_pred HhhcccchhH
Q psy12153 180 VWFIPESPLW 189 (236)
Q Consensus 180 ~~~~pet~~~ 189 (236)
....||++++
T Consensus 187 ~~~~~~~~~~ 196 (394)
T TIGR00883 187 RRNLEETPVF 196 (394)
T ss_pred HHhcCCChhH
Confidence 5567887654
No 66
>PTZ00207 hypothetical protein; Provisional
Probab=99.61 E-value=2.7e-14 Score=130.38 Aligned_cols=149 Identities=13% Similarity=0.074 Sum_probs=123.6
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHh------ccHHHHHHHH
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYN------RSFPVYLILR 88 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 88 (236)
.+.+++++ +..+.+++.++.. ...++.++.|+++||+|||++++++.++..++.++++++ ++.+.+++.|
T Consensus 52 ~L~~~lgl---s~~~l~~i~svg~-~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r 127 (591)
T PTZ00207 52 AMQARYNL---TQRDLSTITTVGI-AVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYN 127 (591)
T ss_pred HHHHHhCc---CHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHH
Confidence 55678899 8999998887743 445677889999999999999999999999999999886 6889999999
Q ss_pred HHHHHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHH-HHHHHHhcc-hhHHHHH
Q psy12153 89 TMQGFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVM-LSLVSYWFP-NWRDAEL 166 (236)
Q Consensus 89 ~l~g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l-~~~i~~~~~-~w~~~~~ 166 (236)
++.|++.+...+.....+.+++| ++| |.+.++......+|..+ +++...++. +|+..|+
T Consensus 128 ~l~G~G~~~~~~~~~~~i~~~Fp-~~R------------------G~a~Gi~~~~~gLGsaI~~~l~~~l~~~~~~~~fl 188 (591)
T PTZ00207 128 GLMTLGCMLFDLGAVVTVLSVFP-SNR------------------GAVVAIMKTFTGLGSAILGSIQLAFFSDNTSAYFF 188 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCh-hhh------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 99999988888888888999996 678 99999999999999975 444444443 7888888
Q ss_pred HHHhHHHHHHHHHHhhcccc
Q psy12153 167 VTSLPFVGFSLFYVWFIPES 186 (236)
Q Consensus 167 i~~~~~~~~~~~~~~~~pet 186 (236)
+.++.++++.++..+++++.
T Consensus 189 ~l~vl~~vv~ll~~~~vr~p 208 (591)
T PTZ00207 189 FLMSFALVVGILAIVFMRLP 208 (591)
T ss_pred HHHHHHHHHHHHHHhheeCC
Confidence 88888877777776666543
No 67
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.61 E-value=1.1e-14 Score=107.88 Aligned_cols=134 Identities=21% Similarity=0.329 Sum_probs=115.9
Q ss_pred HHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcCccc
Q psy12153 35 TLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQNSTYTLLIELFPTRW 114 (236)
Q Consensus 35 ~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~e~~~~~~ 114 (236)
+.+.++..++.++.|++.||+|||+.+..+.....++.+.....++.+.+.+.+++.|++.+...+....++.|..|+++
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 84 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEE 84 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhh
Confidence 45677888999999999999999999999999888888888888899999999999999998888889999999999999
Q ss_pred cccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhHHHHHHHHHHhhcccc
Q psy12153 115 RIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLPFVGFSLFYVWFIPES 186 (236)
Q Consensus 115 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~~~~~~~~~~~~~pet 186 (236)
| ++..+..+....+|..+++.+.+.+. +|++.+++.++..++..+...++.||+
T Consensus 85 ~------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 85 R------------------GVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPET 141 (141)
T ss_pred h------------------hHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 9 99999999999999999999888774 688888888877755556666666663
No 68
>PRK10133 L-fucose transporter; Provisional
Probab=99.61 E-value=2.1e-14 Score=127.88 Aligned_cols=121 Identities=10% Similarity=0.121 Sum_probs=106.8
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHH---HHhccHHHHHHHHHHH
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAI---VYNRSFPVYLILRTMQ 91 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~ 91 (236)
.+.+++++ +..+.++..+.+.+++.+++++.|+++||+|||+++.++..+.+++++++ ...++++.+++.|+++
T Consensus 51 ~i~~~~~~---s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~ 127 (438)
T PRK10133 51 QFQQAFTL---TNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFII 127 (438)
T ss_pred HHHHHhCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 34568888 99999999999999999999999999999999999999999999998775 4578999999999999
Q ss_pred HHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHH
Q psy12153 92 GFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSY 156 (236)
Q Consensus 92 g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~ 156 (236)
|++.+...+....++.|..++++| ....+..+..+.+|..+++.++.
T Consensus 128 G~g~g~~~~~~~~~v~~~~~~~~~------------------~~~~s~~~~~~~~G~~~g~~~g~ 174 (438)
T PRK10133 128 AAGLGCLETAANPFVTVLGPESSG------------------HFRLNLAQTFNSFGAIIAVVFGQ 174 (438)
T ss_pred HHHHHHHHhhHHHHHHHhCChhhH------------------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998776666 66788888888888888887754
No 69
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.61 E-value=2.8e-14 Score=124.92 Aligned_cols=139 Identities=21% Similarity=0.215 Sum_probs=120.0
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhhHHHHHHHHhh
Q psy12153 30 NAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQNSTYTLLIEL 109 (236)
Q Consensus 30 ~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~e~ 109 (236)
.+++.+++.++..++.++.|+++||+|||++++.+.++..++..+....++++.+++.|++.|++.+ ..+....++.+.
T Consensus 56 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~ 134 (408)
T PRK09874 56 SGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQ 134 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHh
Confidence 4888999999999999999999999999999999999999998888888999999999999998754 456677888899
Q ss_pred cCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhHHHHHHHHHHhhcccc
Q psy12153 110 FPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLPFVGFSLFYVWFIPES 186 (236)
Q Consensus 110 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~~~~~~~~~~~~~pet 186 (236)
.|+++| ++..+.......+|..+++.+.+.+. +|++.|++.++..++..+...+++||.
T Consensus 135 ~~~~~~------------------~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 135 VPRNKS------------------GWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIREN 196 (408)
T ss_pred cCHhhh------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 999989 99999999999999999998888763 799999988887755566666677775
Q ss_pred h
Q psy12153 187 P 187 (236)
Q Consensus 187 ~ 187 (236)
+
T Consensus 197 ~ 197 (408)
T PRK09874 197 F 197 (408)
T ss_pred c
Confidence 4
No 70
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.59 E-value=1.8e-14 Score=128.92 Aligned_cols=149 Identities=15% Similarity=0.119 Sum_probs=124.4
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHH-HHHHHHH
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLI-LRTMQGF 93 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~ 93 (236)
.+.+++|+ +..+.+++.+.+.++..++.++.|+++||+|||++++.+.++..++++.++++++.+.+++ .|++.|+
T Consensus 44 ~i~~~~g~---s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~ 120 (455)
T TIGR00892 44 ELQQIFQA---TYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFITGL 120 (455)
T ss_pred HHHHHhCc---chhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 45578888 8999999999999999999999999999999999999999999999999888888888765 4689999
Q ss_pred hhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHh
Q psy12153 94 FVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSL 170 (236)
Q Consensus 94 ~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~ 170 (236)
+.+...+....++.++++ ++| +++.++.+.+..+|..++|.+.+.+. +||+.|++.++
T Consensus 121 ~~~~~~~~~~~~~~~~~~-~~r------------------~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~ 181 (455)
T TIGR00892 121 GLAFNFQPSLTMLGKYFY-RRR------------------PLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGG 181 (455)
T ss_pred cchhhhhHHHHHHHHHHH-hhH------------------HHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHH
Confidence 988766667788889885 678 99999999999999999988877653 79999999988
Q ss_pred HHHHHHHHHHhhccc
Q psy12153 171 PFVGFSLFYVWFIPE 185 (236)
Q Consensus 171 ~~~~~~~~~~~~~pe 185 (236)
+.++..+..++..|+
T Consensus 182 ~~~~~~v~~~~~~~~ 196 (455)
T TIGR00892 182 LLLHCCVCGALMRPV 196 (455)
T ss_pred HHHHHHHHHHHhCCC
Confidence 774444444444443
No 71
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.59 E-value=3.3e-14 Score=120.84 Aligned_cols=139 Identities=24% Similarity=0.312 Sum_probs=125.6
Q ss_pred eeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhh
Q psy12153 17 VLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQ 96 (236)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~ 96 (236)
.++++. +..+.++..+...++..++.++.|+++||+|||+.+.++.++..++.+.....++.+.+.+.|++.|++.+
T Consensus 26 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~ 102 (352)
T cd06174 26 AEDLGL---SASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLGGG 102 (352)
T ss_pred HHHcCC---CHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHcccc
Confidence 345566 88999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhHHH
Q psy12153 97 GLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLPFV 173 (236)
Q Consensus 97 ~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~~~ 173 (236)
...+....++.|++|+++| ++..+..+....+|..+++.++..+. +|++.+++.++..+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (352)
T cd06174 103 ALYPAAAALIAEWFPPKER------------------GRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGL 164 (352)
T ss_pred cccHhHHHHHHHhCCccch------------------hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9999999999999999999 99999999999999999999988774 58988888777764
Q ss_pred HHH
Q psy12153 174 GFS 176 (236)
Q Consensus 174 ~~~ 176 (236)
+..
T Consensus 165 ~~~ 167 (352)
T cd06174 165 LLA 167 (352)
T ss_pred HHH
Confidence 433
No 72
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.57 E-value=2.8e-14 Score=128.75 Aligned_cols=147 Identities=8% Similarity=-0.043 Sum_probs=120.2
Q ss_pred eeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhh-hCchHHHHHHHHHHHHHHHHHHHhccHHH-HHHHHHHHHHhh
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADR-FGRRVIMLISFYGQGAISIAIVYNRSFPV-YLILRTMQGFFV 95 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~g~~~ 95 (236)
+++|+ +..+.+++.+.+.....+..+++|+++|| +|||++++++.++..++.+.+++..+... +.+.|.++|++.
T Consensus 43 ~~lg~---~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~ 119 (489)
T PRK10207 43 KQLGF---SQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGN 119 (489)
T ss_pred HHcCC---CHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhcc
Confidence 46777 88888999999998888889999999999 99999999999999999999988776444 457899999999
Q ss_pred hhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhHH
Q psy12153 96 QGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLPF 172 (236)
Q Consensus 96 ~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~~ 172 (236)
|...+...+++.|.+|+++|. |+...+..+.+.++|..++|.+++++. +||+.|++.++..
T Consensus 120 g~~~~~~~~li~~~~p~~~~~----------------~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~ 183 (489)
T PRK10207 120 GLFKANPASLLSKCYPPKDPR----------------LDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGL 183 (489)
T ss_pred ccccCCHHHHHHHhcCCCchh----------------hhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHH
Confidence 999888899999999877420 166788899999999999998888875 8999998865433
Q ss_pred HHHHHHHHhhcc
Q psy12153 173 VGFSLFYVWFIP 184 (236)
Q Consensus 173 ~~~~~~~~~~~p 184 (236)
+..++.+++.+
T Consensus 184 -~~~~~~~~~~~ 194 (489)
T PRK10207 184 -IIALLVYFACR 194 (489)
T ss_pred -HHHHHHHHHcc
Confidence 44444444444
No 73
>KOG0252|consensus
Probab=99.57 E-value=1.1e-14 Score=126.52 Aligned_cols=149 Identities=17% Similarity=0.154 Sum_probs=122.6
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhc-------cHHHHHHHHHHHHHhhhhh
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNR-------SFPVYLILRTMQGFFVQGL 98 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~g~~~~~~ 98 (236)
+....+.+..+..+|.++|++++|++.||+|||+++...+++..+++++++.+. -..++...|++.|+|.|+-
T Consensus 82 ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGD 161 (538)
T KOG0252|consen 82 PSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGD 161 (538)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCC
Confidence 556678889999999999999999999999999999999999999998666532 1356778899999999999
Q ss_pred hHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc------------------h
Q psy12153 99 QNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP------------------N 160 (236)
Q Consensus 99 ~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~------------------~ 160 (236)
+|...++++|...++.| |...+........|.+.|..++..+. -
T Consensus 162 YPlSAtI~SE~an~~~R------------------Ga~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~v 223 (538)
T KOG0252|consen 162 YPLSATIMSESANKKTR------------------GAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGV 223 (538)
T ss_pred CcchHHHhhhhhhhccc------------------cceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHH
Confidence 99999999999999999 77777776666666666666555441 2
Q ss_pred hHHHHHHHHhHHHHHHHHHHhhcccchhHHHhc
Q psy12153 161 WRDAELVTSLPFVGFSLFYVWFIPESPLWKYTK 193 (236)
Q Consensus 161 w~~~~~i~~~~~~~~~~~~~~~~pet~~~~~~~ 193 (236)
||..+.+..++. +..+...+.+|||+++....
T Consensus 224 WRl~~glg~vpa-~~~ly~Rl~M~Et~~Y~al~ 255 (538)
T KOG0252|consen 224 WRIIFGLGAVPA-LLVLYFRLKMPETARYTALV 255 (538)
T ss_pred HHHHHHHHHHHH-HHHHHhhhcCCcchhHHHHh
Confidence 998888777777 77777788899999987443
No 74
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.56 E-value=1.2e-13 Score=120.48 Aligned_cols=124 Identities=18% Similarity=0.095 Sum_probs=113.4
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFF 94 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 94 (236)
.+.+++|+ +..+.+++.+.+.++..+++++.|+++||+|||+++..+.++..+++...+..++++.+++.|+++|++
T Consensus 31 ~~~~~~~~---s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~ 107 (381)
T PRK03633 31 LWLAQEHL---PTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIG 107 (381)
T ss_pred HHHHHcCC---CHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 34467788 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP 159 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~ 159 (236)
.+...+.....+.+..++++| ++..+.......+|..+++.+.+.+.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~g~~~g~~~~~~l~ 154 (381)
T PRK03633 108 CAMIWVVVESALMCSGTSRNR------------------GRLLAAYMMVYYLGTVLGQLLVSKVS 154 (381)
T ss_pred HHHHHHHHHHHHHHhCCHHHH------------------HHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 988888777778888888888 99999999999999999999988875
No 75
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.56 E-value=1.2e-13 Score=129.40 Aligned_cols=139 Identities=19% Similarity=0.145 Sum_probs=117.1
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhhHHHHHHHHhh
Q psy12153 30 NAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQNSTYTLLIEL 109 (236)
Q Consensus 30 ~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~e~ 109 (236)
..+...+..++.+++.++.|+++||+|||++++++.++.++++++.++.++...+++.+++.|++.++.++...++++|+
T Consensus 597 ~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl 676 (742)
T TIGR01299 597 IYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVEL 676 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35556677789999999999999999999999999999999999888888888888888888888888888889999999
Q ss_pred cCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc--hhHHHHHHHHhHHHHHHHHHHhhcccch
Q psy12153 110 FPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP--NWRDAELVTSLPFVGFSLFYVWFIPESP 187 (236)
Q Consensus 110 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~--~w~~~~~i~~~~~~~~~~~~~~~~pet~ 187 (236)
+|++.| ++.+++......+|.+++|.+++.+. +...+|++.+++. +++.++.+++|||.
T Consensus 677 ~Pt~~R------------------gta~Gi~~~~~rlGaiigp~i~g~L~~~~~~~pf~i~a~~l-ll~~ll~~~LPET~ 737 (742)
T TIGR01299 677 YPSDKR------------------ATAFGFLNALCKAAAVLGILIFGSFVGITKAAPILFASAAL-ACGGLLALKLPDTR 737 (742)
T ss_pred cCHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH-HHHHHHHHhCCCCc
Confidence 999999 99999999999999999999987653 3345677776666 44555555679983
No 76
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.55 E-value=2.7e-13 Score=119.28 Aligned_cols=150 Identities=13% Similarity=0.070 Sum_probs=115.1
Q ss_pred ceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHH---H-hccHHHHHHHHHHH
Q psy12153 16 PVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIV---Y-NRSFPVYLILRTMQ 91 (236)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~l~ 91 (236)
..+|+++ +..+.++..+.+.++..++.++.|+++||+|||+++..+..+..++..... . .++.+.+++.|.+.
T Consensus 39 ~~~~~g~---s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~ 115 (402)
T TIGR00897 39 FLKALGL---SPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIR 115 (402)
T ss_pred HHHHhCC---CHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHH
Confidence 3467777 999999999999999999999999999999999999999988888766543 2 35778888899999
Q ss_pred HHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHH-HHHHHHHHhcc---hhHHHHHH
Q psy12153 92 GFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGL-VMLSLVSYWFP---NWRDAELV 167 (236)
Q Consensus 92 g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~l~~~i~~~~~---~w~~~~~i 167 (236)
|++.+...+.....+.+.+|+++| ++.++..+...++|. .+++.++..+. +|+..++.
T Consensus 116 G~g~~~~~~~~~~~~~~~~~~~~~------------------g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~ 177 (402)
T TIGR00897 116 GLGYPLFAYSFLVWVVYNTKQDNL------------------SSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWS 177 (402)
T ss_pred HcchHHHHhHHHHHHHHhCCHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHH
Confidence 998877777777888899999999 999999999999996 57888776553 55444333
Q ss_pred HHhHHHHHHHHHHhhcccc
Q psy12153 168 TSLPFVGFSLFYVWFIPES 186 (236)
Q Consensus 168 ~~~~~~~~~~~~~~~~pet 186 (236)
......+..++..++.++.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~ 196 (402)
T TIGR00897 178 ALAFVLTGGVIALFSNKDI 196 (402)
T ss_pred HHHHHHHHHHHHHhccCCC
Confidence 3322222233333444443
No 77
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.55 E-value=4.9e-14 Score=124.35 Aligned_cols=149 Identities=17% Similarity=0.109 Sum_probs=122.4
Q ss_pred eeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHH-----hccHHHHHHHHHHHH
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVY-----NRSFPVYLILRTMQG 92 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~g 92 (236)
++++. +..+.+++.+.+.++..+++++.|+++||+|||++++.+.++.+++...... .++++.+.+.|++.|
T Consensus 45 ~~~~~---s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 121 (417)
T PRK10489 45 QMMTG---STLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDG 121 (417)
T ss_pred HHHHC---CHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Confidence 45555 8889999999999999999999999999999999998887777766654432 457788888999999
Q ss_pred HhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHH
Q psy12153 93 FFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTS 169 (236)
Q Consensus 93 ~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~ 169 (236)
++.+...+....++.|..|+++| ++..+.......+|..+++.+++.+. +|++.+++.+
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~ 183 (417)
T PRK10489 122 FFGSLGVTALLAATPALVGRENL------------------MQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAA 183 (417)
T ss_pred HHHHHHHHHHhhhhhhccCHHHH------------------HHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHH
Confidence 98887778788899999999988 99999999999999999999888763 7888888777
Q ss_pred hHHHHHHHHHHhhcccchh
Q psy12153 170 LPFVGFSLFYVWFIPESPL 188 (236)
Q Consensus 170 ~~~~~~~~~~~~~~pet~~ 188 (236)
+.. +...+..+.+||+++
T Consensus 184 ~~~-~~~~~~~~~l~~~~~ 201 (417)
T PRK10489 184 AGT-FITLLPLLRLPALPP 201 (417)
T ss_pred HHH-HHHHHHHHhCCCCCC
Confidence 666 444555566777643
No 78
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.55 E-value=9.7e-14 Score=124.88 Aligned_cols=141 Identities=9% Similarity=-0.008 Sum_probs=123.0
Q ss_pred eeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhh-hCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhh
Q psy12153 20 WHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADR-FGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGL 98 (236)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 98 (236)
+|+ +..+.+++.+.+.++..++++++|+++|| +|||++++++.++.+++.++.++.++.+.+.+++.+.|++.|..
T Consensus 43 lg~---s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~ 119 (475)
T TIGR00924 43 LGF---SQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLF 119 (475)
T ss_pred CCC---CHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccc
Confidence 677 89999999999999999999999999999 89999999999999999999998888888888999999999888
Q ss_pred hHHHHHHHHhhcCccc---cccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhHH
Q psy12153 99 QNSTYTLLIELFPTRW---RIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLPF 172 (236)
Q Consensus 99 ~~~~~~~~~e~~~~~~---r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~~ 172 (236)
.+...++++|++|+++ | +...++.+...++|..+++.+.+++. +|++.|.+.++..
T Consensus 120 ~~~~~~~~a~~~~~~~~~~r------------------~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~ 181 (475)
T TIGR00924 120 KANPSSMVGKLYERGDMPRR------------------DGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGM 181 (475)
T ss_pred cCCHHHHHHHhcCCCCcccc------------------cceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHH
Confidence 8888999999998764 5 77889999999999999999988874 7999998877654
Q ss_pred HHHHHHHHhh
Q psy12153 173 VGFSLFYVWF 182 (236)
Q Consensus 173 ~~~~~~~~~~ 182 (236)
+..++.+++
T Consensus 182 -~~~~l~~~~ 190 (475)
T TIGR00924 182 -VIGLLTFFA 190 (475)
T ss_pred -HHHHHHHHH
Confidence 334444444
No 79
>KOG3764|consensus
Probab=99.54 E-value=3.2e-14 Score=121.78 Aligned_cols=145 Identities=17% Similarity=0.149 Sum_probs=132.3
Q ss_pred cCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhhHHHHH
Q psy12153 25 HECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQNSTYT 104 (236)
Q Consensus 25 ~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~ 104 (236)
.+..+.|++.....+...+.+++.|.+.||+|+|..+++|......++++.++.++++.+++.|.++|++.+.......+
T Consensus 103 ~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsgla 182 (464)
T KOG3764|consen 103 RENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLA 182 (464)
T ss_pred ccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHH
Confidence 37889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhHHHHHHHHHHh
Q psy12153 105 LLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLPFVGFSLFYVW 181 (236)
Q Consensus 105 ~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~~~~~~~~~~~ 181 (236)
+++|.+|++.++ +.++|....+.++|.+++|.+++.+. |.+.+|++.+++.++...+.++
T Consensus 183 mlAd~f~~d~er-----------------~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~ 245 (464)
T KOG3764|consen 183 MLADVFPEDNER-----------------GSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLL 245 (464)
T ss_pred HHHHHcccchhh-----------------hHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHh
Confidence 999999977632 99999999999999999999999884 8899999999999666666666
Q ss_pred hcccc
Q psy12153 182 FIPES 186 (236)
Q Consensus 182 ~~pet 186 (236)
.++.+
T Consensus 246 vi~p~ 250 (464)
T KOG3764|consen 246 VIEPT 250 (464)
T ss_pred eeCcc
Confidence 66654
No 80
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.53 E-value=1.1e-14 Score=135.22 Aligned_cols=151 Identities=13% Similarity=0.107 Sum_probs=127.4
Q ss_pred CcceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhc--------------
Q psy12153 14 GEPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNR-------------- 79 (236)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~-------------- 79 (236)
.++.++|++ +..+.|++.+.+.+++.++.++.+++.||+|||+.+.++.++.++++++.++.+
T Consensus 57 ~~iek~F~l---ss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~ 133 (633)
T TIGR00805 57 TTIERRFKL---STSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSS 133 (633)
T ss_pred hhhhhhhCC---CCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccc
Confidence 356678999 999999999999999999999999999999999999999999999999887542
Q ss_pred -------------------------------------cHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcCccccccccchh
Q psy12153 80 -------------------------------------SFPVYLILRTMQGFFVQGLQNSTYTLLIELFPTRWRIGVATYT 122 (236)
Q Consensus 80 -------------------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~ 122 (236)
.+..++++|+++|++.+..++...+++.|++|+++|
T Consensus 134 ~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~------- 206 (633)
T TIGR00805 134 TGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNS------- 206 (633)
T ss_pred cccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCcccc-------
Confidence 244567899999999999999999999999999999
Q ss_pred hhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc-------------------------hhHHHHHHHHhHHHHHHH
Q psy12153 123 LLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP-------------------------NWRDAELVTSLPFVGFSL 177 (236)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~-------------------------~w~~~~~i~~~~~~~~~~ 177 (236)
+...++......+|..+++.+++.+. .|+..|++.+++.++.++
T Consensus 207 -----------~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v 275 (633)
T TIGR00805 207 -----------PLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSI 275 (633)
T ss_pred -----------HHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988876542 266678887777744444
Q ss_pred HHHhhcccc
Q psy12153 178 FYVWFIPES 186 (236)
Q Consensus 178 ~~~~~~pet 186 (236)
.++++|++
T Consensus 276 -~l~~~p~~ 283 (633)
T TIGR00805 276 -PFFFFPKA 283 (633)
T ss_pred -HHHhCccc
Confidence 44556654
No 81
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.53 E-value=3e-13 Score=116.70 Aligned_cols=135 Identities=13% Similarity=0.052 Sum_probs=115.2
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFF 94 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 94 (236)
.+.+++|+ +..+.++..+++.++..++.++.|+++||+|||+++.++.++..++.... ..++.+.+++.|++.|++
T Consensus 25 ~l~~~~~~---s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~g 100 (355)
T TIGR00896 25 QIRSALGM---SFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALIGVG 100 (355)
T ss_pred HHHHHhCC---CHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHH
Confidence 45678999 99999999999999999999999999999999999999988888877766 678888889999999999
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc-----hhHHHHHHHH
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP-----NWRDAELVTS 169 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~-----~w~~~~~i~~ 169 (236)
.+...+....++.|.++ ++| ++..+..+....+|..+++.+...+. +||+.|.+.+
T Consensus 101 ~~~~~~~~~~~~~~~~~-~~~------------------~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~ 161 (355)
T TIGR00896 101 IAIINVLLPSLIKRDFP-QRV------------------GLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWA 161 (355)
T ss_pred HHHHhccchHHHHHhCc-chh------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Confidence 88877777778888886 578 89999999998999988887766552 3888887666
Q ss_pred hHH
Q psy12153 170 LPF 172 (236)
Q Consensus 170 ~~~ 172 (236)
+..
T Consensus 162 ~~~ 164 (355)
T TIGR00896 162 LPA 164 (355)
T ss_pred HHH
Confidence 544
No 82
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.51 E-value=1.6e-13 Score=118.42 Aligned_cols=150 Identities=15% Similarity=0.166 Sum_probs=131.8
Q ss_pred eeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHH
Q psy12153 17 VLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSF---PVYLILRTMQGF 93 (236)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~g~ 93 (236)
.+|+++ |+.|.+++..+..+...+..++.|.+.||||.|++..++.++..+.++..++..+. +.+++.+++.|+
T Consensus 41 ~~~~~L---S~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~ 117 (417)
T COG2223 41 KSDFGL---SEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGL 117 (417)
T ss_pred ccccCC---CHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhc
Confidence 478999 99999999999999999999999999999999999999999999999999986544 499999999999
Q ss_pred hhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---h---hHHHHHH
Q psy12153 94 FVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---N---WRDAELV 167 (236)
Q Consensus 94 ~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~---w~~~~~i 167 (236)
+ |+.+++...++++++|++++ |.++++.. ..++|..+.+++++.+. + |+....+
T Consensus 118 ~-GasFav~m~~~s~~fP~~~q------------------G~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i 177 (417)
T COG2223 118 A-GASFAVGMPNASFFFPKEKQ------------------GLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGI 177 (417)
T ss_pred c-cceehcccccccccCChhhh------------------hHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 7 56778889999999999999 99999999 88899888888877764 5 8888888
Q ss_pred HHhHHHHHHHHHHhhcccchhH
Q psy12153 168 TSLPFVGFSLFYVWFIPESPLW 189 (236)
Q Consensus 168 ~~~~~~~~~~~~~~~~pet~~~ 189 (236)
..+..++..+..++...|.|..
T Consensus 178 ~~~~l~v~~v~~~~~~~d~p~~ 199 (417)
T COG2223 178 YVVALAIAAVLAWLGMNDVPEH 199 (417)
T ss_pred HHHHHHHHHHHHHHHhCCChhh
Confidence 8777767778888888887764
No 83
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.49 E-value=6.4e-13 Score=130.75 Aligned_cols=145 Identities=19% Similarity=0.217 Sum_probs=115.5
Q ss_pred cchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHH---HhccHHHHHHHHHHHHHhhhhhhHHHH
Q psy12153 27 CKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIV---YNRSFPVYLILRTMQGFFVQGLQNSTY 103 (236)
Q Consensus 27 ~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~g~~~~~~~~~~~ 103 (236)
....+++.+++.++..++++++|+++||+|||++++++.++.++..++.. ..++++.+++.|+++|++.+...+...
T Consensus 46 ~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 125 (1146)
T PRK08633 46 VILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKY 125 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHH
Confidence 45578999999999999999999999999999999988776655554433 356889999999999999999999999
Q ss_pred HHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcch------------hHHHHHHHHhH
Q psy12153 104 TLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFPN------------WRDAELVTSLP 171 (236)
Q Consensus 104 ~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~~------------w~~~~~i~~~~ 171 (236)
+++.|++|+++| ++++++.+.+..+|.++++.+++++.. |.+.+.+..+.
T Consensus 126 ~~i~~~~~~~~r------------------~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (1146)
T PRK08633 126 GIIPELVGKENL------------------SRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLA 187 (1146)
T ss_pred hhhHHhcCcccc------------------hhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHH
Confidence 999999999999 999999999999999999998887632 33344333333
Q ss_pred HHHHHHHHHhhcccchhH
Q psy12153 172 FVGFSLFYVWFIPESPLW 189 (236)
Q Consensus 172 ~~~~~~~~~~~~pet~~~ 189 (236)
..++.++..+.+||+|+.
T Consensus 188 ~~~~~~~~~~~~~~~~~~ 205 (1146)
T PRK08633 188 VAVLGLIFAYRLPKVPAA 205 (1146)
T ss_pred HHHHHHHHHhcCcCCCCC
Confidence 334445555667887643
No 84
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.48 E-value=2.4e-12 Score=111.07 Aligned_cols=150 Identities=13% Similarity=0.061 Sum_probs=113.4
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhh-----CchHHH-HHHHHHHHHHHHHHHHh---ccHHHHH
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRF-----GRRVIM-LISFYGQGAISIAIVYN---RSFPVYL 85 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~-----Grr~~l-~~~~~~~~~~~~~~~~~---~~~~~~~ 85 (236)
.+.+|+++ +.++.++..+. .+...+ .+++|+++||+ |||+.+ +.+.++.++.....++. .+.+.+.
T Consensus 13 ~~~~~~g~---s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~ 87 (356)
T TIGR00901 13 YWLRSKNV---SLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLA 87 (356)
T ss_pred HHHHHcCC---CHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHH
Confidence 34568888 89999998765 444444 89999999998 898874 56677776766666665 3444555
Q ss_pred HHHHHHHHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---h--
Q psy12153 86 ILRTMQGFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---N-- 160 (236)
Q Consensus 86 ~~~~l~g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~-- 160 (236)
...++.+.+.+...+...+++.|++|+++| +++.+....+..+|.++++.++..+. +
T Consensus 88 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r------------------~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~ 149 (356)
T TIGR00901 88 GLAFLIAFFSATQDIALDAWRLEILSDEEL------------------GYGSTIYIVGYRAGMLLSGSLALVLASPEFAN 149 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHhhh------------------chHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 666677777777777788999999999999 99999999999999999998886653 5
Q ss_pred ------hHHHHHHHHhHHHHHHHHHHhhcccch
Q psy12153 161 ------WRDAELVTSLPFVGFSLFYVWFIPESP 187 (236)
Q Consensus 161 ------w~~~~~i~~~~~~~~~~~~~~~~pet~ 187 (236)
||..|++.++..++..++..+..||++
T Consensus 150 ~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~ 182 (356)
T TIGR00901 150 TGLITLWGYIFFWTALLILPGLLVTLFLAKEPQ 182 (356)
T ss_pred cccccccHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 999999888877444444444567753
No 85
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.48 E-value=1.1e-12 Score=119.48 Aligned_cols=137 Identities=18% Similarity=0.154 Sum_probs=111.2
Q ss_pred cchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhhHHHHHHH
Q psy12153 27 CKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQNSTYTLL 106 (236)
Q Consensus 27 ~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~ 106 (236)
.....|+.+.+.++..+..++.|.++|.||||.+++.+.++..+++++++.++|...++.+..+.|++.|... .....+
T Consensus 77 ~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~-~~~~~i 155 (599)
T PF06609_consen 77 SDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQE-LAALAI 155 (599)
T ss_pred CccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHH-HHHHHH
Confidence 4666889999999999999999999999999999999999999999999999999999999999999876654 456668
Q ss_pred HhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhHHHHHHHHHHhh
Q psy12153 107 IELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLPFVGFSLFYVWF 182 (236)
Q Consensus 107 ~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~~~~~~~~~~~~ 182 (236)
+|..|.|.| .....+......+....++.++..+. +|||.|++..+...+..+..+++
T Consensus 156 sEl~p~k~R------------------~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~f 216 (599)
T PF06609_consen 156 SELVPNKWR------------------GLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFF 216 (599)
T ss_pred HHhcccchh------------------hhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 999999888 66666666555555556666665543 89999998888764544444444
No 86
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.44 E-value=2.2e-12 Score=127.17 Aligned_cols=141 Identities=16% Similarity=0.154 Sum_probs=112.6
Q ss_pred chhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHH---HHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhhHHHHH
Q psy12153 28 KWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLI---SFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQNSTYT 104 (236)
Q Consensus 28 ~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~ 104 (236)
...++..+++.+.++++++++|+++||+|||+++.. ..+...+........++++.++++|+++|++.+...+...+
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a 131 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYS 131 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHH
Confidence 456888889999999999999999999999997533 22222222233334578999999999999999999999999
Q ss_pred HHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhHHHHHHHHHHh
Q psy12153 105 LLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLPFVGFSLFYVW 181 (236)
Q Consensus 105 ~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~~~~~~~~~~~ 181 (236)
++.+++++++| ++++++.+.+..+|.+++|.+++++. +|++.|+..++.. +..++..+
T Consensus 132 ~l~~~~~~~~~------------------~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~-~~~~~~~~ 192 (1140)
T PRK06814 132 ILPDHLNKDEL------------------LGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIA-VLGWLASL 192 (1140)
T ss_pred hhHhhcCcccc------------------chhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHH-HHHHHHHh
Confidence 99999999999 99999999999999999999999874 7888884444444 55555666
Q ss_pred hcccch
Q psy12153 182 FIPESP 187 (236)
Q Consensus 182 ~~pet~ 187 (236)
++|+++
T Consensus 193 ~~~~~~ 198 (1140)
T PRK06814 193 FIPKTG 198 (1140)
T ss_pred hCCCCC
Confidence 677654
No 87
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.43 E-value=4.7e-12 Score=111.04 Aligned_cols=151 Identities=15% Similarity=0.142 Sum_probs=109.5
Q ss_pred eeeeeeeecCcchhHHHHHHHHH-HHHhhhhhhhhhhhhhCchHHH-HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q psy12153 17 VLLWHLYHHECKWNAAVVTLYFL-GVILGSIPAGLLADRFGRRVIM-LISFYGQGAISIAIVYNRSFPVYLILRTMQGFF 94 (236)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~g~l~Dr~Grr~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 94 (236)
.+++++ +..+.++..+...+ +..++.+++++ +||+|||+.+ +.+.+...+...+..++++++.+++.+.+.+..
T Consensus 43 ~~~~~~---s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 118 (393)
T PRK15011 43 TDEVHA---RPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSF 118 (393)
T ss_pred HhhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 467888 89999999776555 55566666666 9999998875 455566566777777888888776655554544
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhH
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLP 171 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~ 171 (236)
.+...+....+..+..+++.|. .+...+..+.+.++|.+++|.+++.+. +||..|++.++.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~ 182 (393)
T PRK15011 119 GSTANPQMFALAREHADKTGRE----------------AVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVA 182 (393)
T ss_pred HHhhHHHHHHHHHHHhhhccch----------------HHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHH
Confidence 4566677777888877665451 033456778888899999999988774 899999988887
Q ss_pred HHHHHHHHHhhcccch
Q psy12153 172 FVGFSLFYVWFIPESP 187 (236)
Q Consensus 172 ~~~~~~~~~~~~pet~ 187 (236)
.++..++..+++||.+
T Consensus 183 ~~~~~~~~~~~~~~~~ 198 (393)
T PRK15011 183 FIVCGVMVWLFLPSMR 198 (393)
T ss_pred HHHHHHHHHhhcCccC
Confidence 7566666677788864
No 88
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.41 E-value=1.7e-11 Score=107.78 Aligned_cols=147 Identities=14% Similarity=0.144 Sum_probs=115.5
Q ss_pred eeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhh-----CchH-HHHHHHHHHHHHHHHHHHh---ccHHHHHHHH
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRF-----GRRV-IMLISFYGQGAISIAIVYN---RSFPVYLILR 88 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~-----Grr~-~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 88 (236)
++-++ +.++.|++..+... .+..+++|+++||+ |||+ .++++.++.+++.....+. ++.+.+.+..
T Consensus 27 ~~~g~---~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~ 101 (402)
T PRK11902 27 TVEGL---DIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGLA 101 (402)
T ss_pred HHcCC---CHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHHH
Confidence 34567 88999999777665 68999999999999 8775 6788888887777776765 3466666676
Q ss_pred HHHHHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc----chhHHH
Q psy12153 89 TMQGFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF----PNWRDA 164 (236)
Q Consensus 89 ~l~g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~----~~w~~~ 164 (236)
++.++..+...+...+++.|+.|+++| ++.+++...+..+|.++++.+...+ .+||..
T Consensus 102 ~~~~~~~~~~~~~~~al~~~~~~~~~r------------------~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~ 163 (402)
T PRK11902 102 VLVAFLSASQDIVFDAYSTDVLHPEER------------------GAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNT 163 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcChhhh------------------hHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHH
Confidence 777777777778889999999999999 9999999999999999988876654 279999
Q ss_pred HHHHHhHHHHHHHHHHhhcccchh
Q psy12153 165 ELVTSLPFVGFSLFYVWFIPESPL 188 (236)
Q Consensus 165 ~~i~~~~~~~~~~~~~~~~pet~~ 188 (236)
|++.++.. +...+..++.||+++
T Consensus 164 f~i~a~~~-l~~~l~~~~~~e~~~ 186 (402)
T PRK11902 164 YLLMAGLM-LAGALTTLWAPEPEV 186 (402)
T ss_pred HHHHHHHH-HHHHHHHHhcCCCcc
Confidence 99888877 344444567787654
No 89
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.39 E-value=9.1e-12 Score=110.34 Aligned_cols=141 Identities=15% Similarity=0.189 Sum_probs=117.9
Q ss_pred chhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhc----cHHHHHHHHHHHHHhhhhhhHHHH
Q psy12153 28 KWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNR----SFPVYLILRTMQGFFVQGLQNSTY 103 (236)
Q Consensus 28 ~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~g~~~~~~~~~~~ 103 (236)
...+...++..++..++.++.|+++||+|||++++++.++..+......... +.+.+++.+++.|++.+...+...
T Consensus 251 ~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~ 330 (418)
T TIGR00889 251 KNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGS 330 (418)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5668888899999999999999999999999999999998888766666532 234566778899998888888888
Q ss_pred HHHHhhcCccccccccchhhhhhccccccchhhHHHHH-HHHHHHHHHHHHHHHhcc---------hhHHHHHHHHhHHH
Q psy12153 104 TLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTE-ICWTVGLVMLSLVSYWFP---------NWRDAELVTSLPFV 173 (236)
Q Consensus 104 ~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~l~~~i~~~~~---------~w~~~~~i~~~~~~ 173 (236)
.++.|.+|+++| ++..++.+ ....+|..++|.+++.+. +|+..|.+.+++.+
T Consensus 331 ~~i~~~~p~~~~------------------g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~ 392 (418)
T TIGR00889 331 VFVEKEVPVHIR------------------ASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIA 392 (418)
T ss_pred HHHHHHCCHHHH------------------HHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHH
Confidence 899999999999 99999997 667889999998887753 38889988888887
Q ss_pred HHHHHHHhhcccc
Q psy12153 174 GFSLFYVWFIPES 186 (236)
Q Consensus 174 ~~~~~~~~~~pet 186 (236)
+..++.++++||+
T Consensus 393 i~~~l~~~~~~~~ 405 (418)
T TIGR00889 393 ILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHhCCc
Confidence 7788888888886
No 90
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.38 E-value=1.3e-11 Score=108.26 Aligned_cols=147 Identities=13% Similarity=0.013 Sum_probs=102.2
Q ss_pred eeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHH---Hhc-----cHHHHHHHHH
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIV---YNR-----SFPVYLILRT 89 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~---~~~-----~~~~~~~~~~ 89 (236)
+++|+ +..+.+++.+++.++..+++++.|+++||+|||+.++.+....++...... ..+ .....++.++
T Consensus 31 ~~~g~---s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (396)
T TIGR00882 31 DVNGL---SKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGL 107 (396)
T ss_pred HhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 45777 899999999999999999999999999999999999887666554443221 111 2223455677
Q ss_pred HHHHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc--hhHHHHHH
Q psy12153 90 MQGFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP--NWRDAELV 167 (236)
Q Consensus 90 l~g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~--~w~~~~~i 167 (236)
+.|++.+...+....+..+..+ ++ +...+......++|..+++.+++.+. +|+..|++
T Consensus 108 ~~g~~~~~~~~~~~~~~~~~~~--~~------------------~~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~f~~ 167 (396)
T TIGR00882 108 YLGFVFSAGAGAIEAYIEKVSR--NS------------------NFEYGKARMFGCVGWALCASIAGILFSIDPQIVFWL 167 (396)
T ss_pred HHHHHhccchhhHHHHHHHhhh--hc------------------ccccchhhhhcccHHHHHHHHHhhhhccCchHHHHH
Confidence 7787777767766666666432 23 33445555666777777777776653 89999998
Q ss_pred HHhHHHHHHHHHHhhcccch
Q psy12153 168 TSLPFVGFSLFYVWFIPESP 187 (236)
Q Consensus 168 ~~~~~~~~~~~~~~~~pet~ 187 (236)
.++..++..++..+..||+|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~ 187 (396)
T TIGR00882 168 GSGFALILMLLLMFAKPKAP 187 (396)
T ss_pred HHHHHHHHHHHHHHhCCCCc
Confidence 88877555555544455543
No 91
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.37 E-value=1.3e-11 Score=111.09 Aligned_cols=142 Identities=13% Similarity=0.100 Sum_probs=109.7
Q ss_pred eeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHhh
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRF-GRRVIMLISFYGQGAISIAIVYNR-SFPVYLILRTMQGFFV 95 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~-Grr~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~ 95 (236)
+++|+ +..+.+.+.+.+.....++.+++|+++||+ |||++++++.++..++.++..... +...+.++..+..++.
T Consensus 38 ~~lgl---s~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~ 114 (493)
T PRK15462 38 NQLKY---DDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGY 114 (493)
T ss_pred HhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhc
Confidence 34677 889999999999999999999999999999 999999999999988877665433 2223333334444556
Q ss_pred hhhhHHHHHHHHhhcCcc--ccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHh
Q psy12153 96 QGLQNSTYTLLIELFPTR--WRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSL 170 (236)
Q Consensus 96 ~~~~~~~~~~~~e~~~~~--~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~ 170 (236)
|...+...++++|.+|++ +| ....++.+...++|..++|.+.+++. +|++.|.+.++
T Consensus 115 G~~~~~~~alv~elfp~~~~~R------------------~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaai 176 (493)
T PRK15462 115 GLFKSNVSCLLGELYEPTDPRR------------------DGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAV 176 (493)
T ss_pred ccccccHHHHHHHHCCCCCccc------------------cceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHH
Confidence 666676778999999876 46 77889999899999999999999884 89999988665
Q ss_pred HHHHHHHHHHh
Q psy12153 171 PFVGFSLFYVW 181 (236)
Q Consensus 171 ~~~~~~~~~~~ 181 (236)
.. +.+++.++
T Consensus 177 gm-~l~li~~~ 186 (493)
T PRK15462 177 GM-IAGLVIFL 186 (493)
T ss_pred HH-HHHHHHHH
Confidence 44 44443333
No 92
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.37 E-value=2.8e-11 Score=106.16 Aligned_cols=145 Identities=16% Similarity=0.139 Sum_probs=111.3
Q ss_pred eeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhh
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQG 97 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 97 (236)
+++++ +..+.+++.+...++..++.++.|+++||+|||+.+..+.....+........++.+..++.+++.+++.+.
T Consensus 245 ~~~~~---~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~ 321 (393)
T PRK15011 245 NELHL---PEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGI 321 (393)
T ss_pred HHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 34566 777888888887778888999999999999999988877666555554445566777777788888877776
Q ss_pred hhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhHHHH
Q psy12153 98 LQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLPFVG 174 (236)
Q Consensus 98 ~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~~~~ 174 (236)
..+....+..|.+|+ +| +...+..+....+|..+++.+++.+. +|+..+.+.+++. +
T Consensus 322 ~~~~~~~~~~~~~p~-~~------------------g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~-~ 381 (393)
T PRK15011 322 LGGIGMLYFQDLMPG-QA------------------GSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMI-I 381 (393)
T ss_pred HHHHHHHHHHHhCCC-Cc------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH-H
Confidence 666677788888875 47 88888888888899999998888764 6888888777666 5
Q ss_pred HHHHHHhhccc
Q psy12153 175 FSLFYVWFIPE 185 (236)
Q Consensus 175 ~~~~~~~~~pe 185 (236)
+.++..+++||
T Consensus 382 ~~~~~~~~~~~ 392 (393)
T PRK15011 382 ATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHhhcC
Confidence 56666666665
No 93
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.37 E-value=1.4e-11 Score=111.65 Aligned_cols=136 Identities=10% Similarity=0.057 Sum_probs=109.9
Q ss_pred eeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhh-hCchHHHHHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHhh
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADR-FGRRVIMLISFYGQGAISIAIVYNR-SFPVYLILRTMQGFFV 95 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr-~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~ 95 (236)
+++|+ +..+.++..+.+........+++|+++|| +|||++++++.++..++...+.+++ +.+.+.+.+.++|++.
T Consensus 50 ~~lg~---s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~ 126 (500)
T PRK09584 50 KQLGM---SEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGN 126 (500)
T ss_pred HHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhh
Confidence 56777 78888888877776666667789999999 5999999999999999988888764 4556677889999998
Q ss_pred hhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhHH
Q psy12153 96 QGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLPF 172 (236)
Q Consensus 96 ~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~~ 172 (236)
|...+....++.|++|++++. |....++.+.+.++|..++|.+.+++. +||+.|.+.++..
T Consensus 127 g~~~~~~~~l~~~~f~~~~~~----------------~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~ 190 (500)
T PRK09584 127 GLFKANPSSLLSTCYEKDDPR----------------LDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGM 190 (500)
T ss_pred hcccCCHHHHHHHhcCCCchh----------------hhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Confidence 888888889999999865430 045677888999999999999998874 7999998877544
No 94
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.35 E-value=2.1e-11 Score=107.79 Aligned_cols=142 Identities=15% Similarity=0.116 Sum_probs=114.3
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhhHHHHHH
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQNSTYTL 105 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 105 (236)
+..+.+.+.++..++..++.+++|+++||+|||+.+.++.++..+...+.++.++.+.+.+.+.+.|++.+...+....+
T Consensus 260 ~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 339 (420)
T PRK09528 260 GTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKY 339 (420)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44567888888888899999999999999999999999888888888888888888888888999998877777777788
Q ss_pred HHhhcCccccccccchhhhhhccccccchhhHHH-HHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhHHHHHHHHHHh
Q psy12153 106 LIELFPTRWRIGVATYTLLIELFPTRWRIGVAWV-TEICWTVGLVMLSLVSYWFP---NWRDAELVTSLPFVGFSLFYVW 181 (236)
Q Consensus 106 ~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~~~~~~~~~~~ 181 (236)
+.|.+|++.| +...+. .+....+|..+++.+.+++. ||+..|.+.+++.++..++..+
T Consensus 340 ~~~~~~~~~~------------------a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 401 (420)
T PRK09528 340 ITLNFDVRLS------------------ATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVF 401 (420)
T ss_pred HHHHcCccce------------------eeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHH
Confidence 8899988877 665544 56677888888888887764 7899999888877455555555
Q ss_pred hccc
Q psy12153 182 FIPE 185 (236)
Q Consensus 182 ~~pe 185 (236)
..++
T Consensus 402 ~~~~ 405 (420)
T PRK09528 402 TLSG 405 (420)
T ss_pred HhcC
Confidence 5544
No 95
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.35 E-value=5.3e-11 Score=107.62 Aligned_cols=142 Identities=13% Similarity=0.118 Sum_probs=109.8
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhh-----CchHH-HHHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHhhh
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRF-----GRRVI-MLISFYGQGAISIAIVYN---RSFPVYLILRTMQGFFVQ 96 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~-----Grr~~-l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~g~~~~ 96 (236)
+..+.+.. +.....+ ++.+++|+++||+ |||+. ++++.++.+++...+++. ++.+.+.+.+++.+++.+
T Consensus 45 ~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a 122 (491)
T PRK11010 45 DLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSA 122 (491)
T ss_pred CHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHH
Confidence 66667765 2333333 6889999999999 99886 557767666666666654 367778888999999888
Q ss_pred hhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc----hhHHHHHHHHhHH
Q psy12153 97 GLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP----NWRDAELVTSLPF 172 (236)
Q Consensus 97 ~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~----~w~~~~~i~~~~~ 172 (236)
...+...++..|++|+++| ++..++...+..+|.++++.+...+. +||..|++.++..
T Consensus 123 ~~~i~~~a~~~~~~~~~~r------------------g~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ 184 (491)
T PRK11010 123 SQDIVFDAWKTDVLPAEER------------------GAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALL 184 (491)
T ss_pred HHHHHHHHHHHHhcChhhh------------------HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHH
Confidence 8888889999999999999 99999999999999999987776652 7999999988877
Q ss_pred HHHHHHHHhhcccchh
Q psy12153 173 VGFSLFYVWFIPESPL 188 (236)
Q Consensus 173 ~~~~~~~~~~~pet~~ 188 (236)
++..+..+++||+++
T Consensus 185 -ll~~l~~~~~~e~~~ 199 (491)
T PRK11010 185 -IPCIIATLLAPEPTD 199 (491)
T ss_pred -HHHHHHHHhcCCCcc
Confidence 444445555788753
No 96
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.32 E-value=6.2e-11 Score=103.81 Aligned_cols=137 Identities=15% Similarity=0.114 Sum_probs=111.8
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhhHHHHHHHHhh
Q psy12153 30 NAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQNSTYTLLIEL 109 (236)
Q Consensus 30 ~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~e~ 109 (236)
.++..+.+.++..++.++.|++.||+|||+.+..+..+..++.......++.+.+++..++.|++.+..++.......|.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~ 330 (399)
T PRK05122 251 AALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKR 330 (399)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 45566778888899999999999999999999988888888887777778887788888999999888888777888899
Q ss_pred cCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhHHHHHHHHHHhhccc
Q psy12153 110 FPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLPFVGFSLFYVWFIPE 185 (236)
Q Consensus 110 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~~~~~~~~~~~~~pe 185 (236)
.|+++| ++..++.+....+|..+++.+.+.+. +|+..+++.++..++ .++..+++++
T Consensus 331 ~~~~~~------------------g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~ 390 (399)
T PRK05122 331 VPPQNR------------------GAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALL-GLALTWLLYR 390 (399)
T ss_pred CCHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH-HHHHHHHhcc
Confidence 999989 99999999999999888887777664 788888888777744 4444444444
No 97
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.31 E-value=3.5e-11 Score=105.07 Aligned_cols=144 Identities=9% Similarity=-0.086 Sum_probs=104.6
Q ss_pred eeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCch----HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Q psy12153 17 VLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRR----VIMLISFYGQGAISIAIVYNRSFPVYLILRTMQG 92 (236)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 92 (236)
.+|++. +..+.++..+++.++..++++++|.++||+||| +.+.+..... ........++.+.+++.|++.|
T Consensus 31 l~~~g~---s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~l~g 105 (382)
T PRK11128 31 LKGQGY---TPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFGAHSFWLLFVAIGLFN 105 (382)
T ss_pred HHhcCC---CHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHhcccHHHHHHHHHHHH
Confidence 456777 999999999999999999999999999999984 3332222211 2222334578899999999999
Q ss_pred HhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHH
Q psy12153 93 FFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTS 169 (236)
Q Consensus 93 ~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~ 169 (236)
++.+...+...++..++ .++| ++..+......++|..++|.+++++. +||..|++.+
T Consensus 106 ~~~~~~~~~~~a~~~~~--~~~~------------------~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~ 165 (382)
T PRK11128 106 LFFSPLVPLTDALANTW--QKQI------------------GLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILT 165 (382)
T ss_pred HHHcccccHHHHHHHHH--Hhhc------------------cCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHH
Confidence 98887778777777776 3446 66677777777888888888888773 8999988777
Q ss_pred hHHHHHHHHHHhhcccc
Q psy12153 170 LPFVGFSLFYVWFIPES 186 (236)
Q Consensus 170 ~~~~~~~~~~~~~~pet 186 (236)
+.. +...+..++.||.
T Consensus 166 ~~~-~~~~~~~~~~~~~ 181 (382)
T PRK11128 166 AGV-ASMLLGQLLRPTI 181 (382)
T ss_pred HHH-HHHHHHHHccCCC
Confidence 654 3333344445654
No 98
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.31 E-value=6.5e-11 Score=106.04 Aligned_cols=143 Identities=15% Similarity=0.054 Sum_probs=102.1
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHh--cc-HH-HHHHHHHHHHHhhhh-hhH
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYN--RS-FP-VYLILRTMQGFFVQG-LQN 100 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~--~~-~~-~~~~~~~l~g~~~~~-~~~ 100 (236)
+.....+......+...++.++.++++||+|||+.++.+.++.+++.+..... .+ .+ ......++.+.+.+. ..+
T Consensus 304 ~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (479)
T PRK10077 304 STDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGP 383 (479)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccc
Confidence 55556666677788889999999999999999999999998888887766532 12 11 122223333333332 235
Q ss_pred HHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---------hhHHHHHHHHhH
Q psy12153 101 STYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---------NWRDAELVTSLP 171 (236)
Q Consensus 101 ~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---------~w~~~~~i~~~~ 171 (236)
....++.|.+|+++| +...++......+|..+++.+.+.+. +|+..|++.++.
T Consensus 384 ~~~~~~~e~~p~~~r------------------~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 445 (479)
T PRK10077 384 VCWVLLSEIFPNAIR------------------GKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCM 445 (479)
T ss_pred hhHHHhHhhCChhHH------------------HHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHH
Confidence 567888888888888 99999999999999888866555332 466778877777
Q ss_pred HHHHHHHHHhhcccc
Q psy12153 172 FVGFSLFYVWFIPES 186 (236)
Q Consensus 172 ~~~~~~~~~~~~pet 186 (236)
.++..++.+++.||+
T Consensus 446 ~~~~~~~~~~~~~e~ 460 (479)
T PRK10077 446 GVLAALFMWKFVPET 460 (479)
T ss_pred HHHHHHHHHhccccC
Confidence 656666667778887
No 99
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.30 E-value=8.7e-11 Score=103.02 Aligned_cols=139 Identities=21% Similarity=0.174 Sum_probs=111.2
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhhHHHHHH
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQNSTYTL 105 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 105 (236)
+..+.+...+.+.++..++.++.|+++||+|||+.+..+.+...++.......++.+.+.+..++.|++.++..+....+
T Consensus 253 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 332 (406)
T PRK11551 253 SRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYAL 332 (406)
T ss_pred ChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 77888999999999999999999999999999999888777777766666667777767777777888777777888899
Q ss_pred HHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc----hhHHHHHHHHhHHHHHHHHHHh
Q psy12153 106 LIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP----NWRDAELVTSLPFVGFSLFYVW 181 (236)
Q Consensus 106 ~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~----~w~~~~~i~~~~~~~~~~~~~~ 181 (236)
..|.+|+++| ++..++.+....+|..++|.+.+.+. +|...+++..... +.+.+..+
T Consensus 333 ~~~~~p~~~~------------------g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~-~~~~~~~~ 393 (406)
T PRK11551 333 APLFYPTQVR------------------GTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVI-LVAALAAL 393 (406)
T ss_pred HHHHcchhhh------------------hhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHH-HHHHHHHH
Confidence 9999999999 99999999999999999999988874 3455555555444 44444444
Q ss_pred hc
Q psy12153 182 FI 183 (236)
Q Consensus 182 ~~ 183 (236)
.+
T Consensus 394 ~~ 395 (406)
T PRK11551 394 LL 395 (406)
T ss_pred HH
Confidence 33
No 100
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.30 E-value=8.8e-11 Score=99.76 Aligned_cols=132 Identities=22% Similarity=0.235 Sum_probs=120.7
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchH-HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhhHHHHH
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRV-IMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQNSTYT 104 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~ 104 (236)
+..+.++......++..++.++.+++.||+|||+ .+..+..+..++.......++.+...+..++.|++.+...+....
T Consensus 209 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 288 (352)
T cd06174 209 SAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLT 288 (352)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHHH
Confidence 8888999999999999999999999999999999 999999999999998888888888889999999999999999999
Q ss_pred HHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhHHHHH
Q psy12153 105 LLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLPFVGF 175 (236)
Q Consensus 105 ~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~~~~~ 175 (236)
++.|..|+++| ++..+..+....+|..+++.+.+.+. +|+..+++.+++.++.
T Consensus 289 ~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~ 344 (352)
T cd06174 289 LASELAPPEAR------------------GTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLA 344 (352)
T ss_pred HHHhhcCHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHH
Confidence 99999999999 99999999999999999999988774 7888888888877333
No 101
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.28 E-value=1.8e-10 Score=99.60 Aligned_cols=145 Identities=18% Similarity=0.174 Sum_probs=111.7
Q ss_pred eeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhh
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQG 97 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 97 (236)
++++. +..+.++..........++.++.|++.||+|||+.+.++.++..+........++.+.+.+.+.+.|++.+.
T Consensus 228 ~~~g~---~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 304 (375)
T TIGR00899 228 HELGL---PDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGI 304 (375)
T ss_pred HHcCC---CHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555 777788887777777788889999999999999998887776666555555566777777788888988888
Q ss_pred hhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhHHHH
Q psy12153 98 LQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLPFVG 174 (236)
Q Consensus 98 ~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~~~~ 174 (236)
..+....+..|..|+ ++ +...+..+....+|..++|.+.+.+. +|+..|++.++.. +
T Consensus 305 ~~~~~~~~~~~~~~~-~~------------------~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~-~ 364 (375)
T TIGR00899 305 LAGIGMLYFQDLMPG-RA------------------GAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVML-I 364 (375)
T ss_pred HHHHHHHHHHHhCcc-hh------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHH-H
Confidence 778788888898875 56 77888888888899999998888764 6888888887776 5
Q ss_pred HHHHHHhhccc
Q psy12153 175 FSLFYVWFIPE 185 (236)
Q Consensus 175 ~~~~~~~~~pe 185 (236)
...+..++++|
T Consensus 365 ~~~~~~~~~~~ 375 (375)
T TIGR00899 365 VALFCLLLIKD 375 (375)
T ss_pred HHHHHHheecC
Confidence 54445555543
No 102
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.27 E-value=7.1e-11 Score=101.51 Aligned_cols=134 Identities=16% Similarity=0.041 Sum_probs=109.8
Q ss_pred eeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccH--HHHHHHHHHHHHhh
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSF--PVYLILRTMQGFFV 95 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~g~~~ 95 (236)
++++. +..+.++..+.+.++..++.++.|+++||+|||+.+.++.++..++.......++. ..+.....+.|++.
T Consensus 233 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 309 (377)
T TIGR00890 233 QSLGL---SDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTW 309 (377)
T ss_pred HHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHh
Confidence 34555 67778889999999999999999999999999999999888888887777665543 23345567778777
Q ss_pred hhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhHH
Q psy12153 96 QGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLPF 172 (236)
Q Consensus 96 ~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~~ 172 (236)
+...+....++.|.+|+++| ++..++.+....+|..++|.+.+.+. +|+..|.+.+++.
T Consensus 310 g~~~~~~~~~~~~~~~~~~~------------------~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~ 371 (377)
T TIGR00890 310 GGTISLFPSLVSDIFGPANS------------------AANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFA 371 (377)
T ss_pred ccchhccHHHHHHHhhhhhh------------------hhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHH
Confidence 77777777889999999999 99999999999999999999888764 7888888777665
No 103
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.26 E-value=5.6e-11 Score=106.99 Aligned_cols=133 Identities=18% Similarity=0.114 Sum_probs=98.3
Q ss_pred eeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHhh
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYN--RSFPVYLILRTMQGFFV 95 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~g~~~ 95 (236)
+++++ +..+.+++.+...++..++.++.|+++||+|||++++.+.++..+..+..... .+.+...+..++.+...
T Consensus 304 ~~~g~---~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (496)
T PRK03893 304 TDLGY---DPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLG 380 (496)
T ss_pred hhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHh
Confidence 36667 88899999999999999999999999999999999888876666655444332 23333333344444333
Q ss_pred hhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhH
Q psy12153 96 QGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLP 171 (236)
Q Consensus 96 ~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~ 171 (236)
.+..+....++.|.+|+++| +...++......+|..++|.+++.+. +|+..+...+..
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~------------------g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~ 441 (496)
T PRK03893 381 QGISGLLPKLIGGYFDTEQR------------------AAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFS 441 (496)
T ss_pred cccchhhHHHHHhhCCHHHh------------------hcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHH
Confidence 33445667788899999889 99999998888999999999888774 566666544443
No 104
>KOG0569|consensus
Probab=99.26 E-value=2.9e-10 Score=101.49 Aligned_cols=148 Identities=15% Similarity=0.110 Sum_probs=112.6
Q ss_pred eeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhc---cHH------HHHHHH
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNR---SFP------VYLILR 88 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~---~~~------~~~~~~ 88 (236)
.+-++ +..+..+.+....+...+.++++.++.||+|||+.++.+..++.+..+++.... +.. ..++..
T Consensus 298 ~~aG~---~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~ 374 (485)
T KOG0569|consen 298 KTAGF---TPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAI 374 (485)
T ss_pred HHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 34456 788888999999999999999999999999999999999999998888776421 111 112233
Q ss_pred HHHHHhhh-hhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcch-h-HHHH
Q psy12153 89 TMQGFFVQ-GLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFPN-W-RDAE 165 (236)
Q Consensus 89 ~l~g~~~~-~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~~-w-~~~~ 165 (236)
++..++.+ +..|+.+.+.+|++|++.| ..+.+.......++.++.....+.+.+ + ...|
T Consensus 375 ~~~~~~f~~G~gpi~~fi~aELf~~~~R------------------~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~~~f 436 (485)
T KOG0569|consen 375 FLFIISFAIGPGPIPWFIGAELFPQSAR------------------SAAQSVATAVNWLSNFIVGFAFPPLQNVIGPYVF 436 (485)
T ss_pred HHHHHhhhcCCCchhHHHHHHhCCccch------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhh
Confidence 33333322 4467778888999998888 999999988888888887776666642 2 1677
Q ss_pred HHHHhHHHHHHHHHHhhcccc
Q psy12153 166 LVTSLPFVGFSLFYVWFIPES 186 (236)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~pet 186 (236)
+...+++.+..+..++.+|||
T Consensus 437 ilF~i~~~~~~i~~~~~lPET 457 (485)
T KOG0569|consen 437 ILFVIPLAIFLIYLYRYLPET 457 (485)
T ss_pred HHHHHHHHHHHHHHHHhCccc
Confidence 788888878888999999999
No 105
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.26 E-value=1.2e-10 Score=101.70 Aligned_cols=132 Identities=7% Similarity=-0.103 Sum_probs=100.0
Q ss_pred eeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHH-HHHHHH-HHHHHhccHHHHHHHHHHHHHh
Q psy12153 17 VLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFY-GQGAIS-IAIVYNRSFPVYLILRTMQGFF 94 (236)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~l~g~~ 94 (236)
.+++++ +..+.+++.+++.+...++++++|.++||+|||........ ...+.. .....+++++.+++.|.+++.+
T Consensus 31 l~~~g~---s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~l~~~~ 107 (382)
T TIGR00902 31 LKGIGL---GEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFSAGAHNAWLLFIAIGLFALF 107 (382)
T ss_pred HHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 456778 99999999999999999999999999999998543322111 111111 2233567899999999999988
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhH
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLP 171 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~ 171 (236)
.+...+...++..+. .++| ++..+......++|.+++|.+++.+. +||..|.+....
T Consensus 108 ~~~~~p~~~al~~~~--~~~~------------------~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~ 167 (382)
T TIGR00902 108 FSAGMPIGDALANTW--QKQF------------------GLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAG 167 (382)
T ss_pred HccchhHHHHHHHHH--HHHc------------------CCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHH
Confidence 877778777776654 4567 77888888888899999988877764 899988876654
No 106
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.25 E-value=7.2e-11 Score=104.47 Aligned_cols=149 Identities=15% Similarity=0.131 Sum_probs=111.9
Q ss_pred eeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhh----hCc-hHHHHHHHHHHHHHHHHHHHhcc------HHHHHH
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADR----FGR-RVIMLISFYGQGAISIAIVYNRS------FPVYLI 86 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr----~Gr-r~~l~~~~~~~~~~~~~~~~~~~------~~~~~~ 86 (236)
+++++ +..+.+++.++..+..++..++.|.++|| +|| |+.++++....+++.+++...++ ...+++
T Consensus 28 ~~~g~---s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 104 (437)
T TIGR00792 28 DVLGL---SAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYI 104 (437)
T ss_pred HccCC---CHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHH
Confidence 46788 99999999999999999999999999998 677 45677788888877777766553 234455
Q ss_pred HHHHHHHhhhhhhHHHHHHHHhhc-CccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc-------
Q psy12153 87 LRTMQGFFVQGLQNSTYTLLIELF-PTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF------- 158 (236)
Q Consensus 87 ~~~l~g~~~~~~~~~~~~~~~e~~-~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~------- 158 (236)
.+++.+++.+.......++..|.. ++++| ++..+..+....+|..+++.+...+
T Consensus 105 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~R------------------~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~ 166 (437)
T TIGR00792 105 TYILLGLFYSFVNIPYWSLVPAITLDPRER------------------ESLSTFRRFGATLGGLLVAVIVLPLVSYFGGG 166 (437)
T ss_pred HHHHHHHHHHhhcccHhhCcccccCCHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 666777776665556677888887 45778 8888888888888776665443221
Q ss_pred ---chhHHHHHHHHhHHHHHHHHHHhhcccch
Q psy12153 159 ---PNWRDAELVTSLPFVGFSLFYVWFIPESP 187 (236)
Q Consensus 159 ---~~w~~~~~i~~~~~~~~~~~~~~~~pet~ 187 (236)
.+|++.+.+.+++.++..++..+..||++
T Consensus 167 ~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~ 198 (437)
T TIGR00792 167 DDKFGWFMFALVLALIGVVSLIICFFGTKERY 198 (437)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHcCCEecC
Confidence 26999998888887666666677788865
No 107
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.25 E-value=2e-10 Score=101.33 Aligned_cols=147 Identities=14% Similarity=0.096 Sum_probs=121.1
Q ss_pred eeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhh
Q psy12153 20 WHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQ 99 (236)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~ 99 (236)
+|. +..+.+++.+...++..++.++.+++.||.++++.+..+..+.+++.++....++.+...+..++.|++.+...
T Consensus 254 ~g~---~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 330 (417)
T PRK10489 254 WQM---GAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISS 330 (417)
T ss_pred cCC---ChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHH
Confidence 566 77888999999999999999999999999888888888888777777777777777777778888888877776
Q ss_pred HHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhHHHHHH
Q psy12153 100 NSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLPFVGFS 176 (236)
Q Consensus 100 ~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~~~~~~ 176 (236)
+....++.|..|++.| ++..++......+|..+++.+.+.+. +++..++..+....+..
T Consensus 331 ~~~~~~~~~~~p~~~~------------------g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~ 392 (417)
T PRK10489 331 LLQYTLLQTQTPDEML------------------GRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIG 392 (417)
T ss_pred HHHHHHHHhhCCHHHH------------------HHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHH
Confidence 7777889999999999 99999999999999999999888875 45667776776665666
Q ss_pred HHHHhhcccch
Q psy12153 177 LFYVWFIPESP 187 (236)
Q Consensus 177 ~~~~~~~pet~ 187 (236)
++..+.+|+.+
T Consensus 393 ~~~~~~~~~~~ 403 (417)
T PRK10489 393 VLLLLVLGELR 403 (417)
T ss_pred HHHHHhccccc
Confidence 77777778763
No 108
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.25 E-value=2.2e-10 Score=100.26 Aligned_cols=135 Identities=17% Similarity=0.109 Sum_probs=110.8
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhhHHHHHHHHhh
Q psy12153 30 NAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQNSTYTLLIEL 109 (236)
Q Consensus 30 ~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~e~ 109 (236)
.+.+.++..++..++.+..|+++||+|||+.+..+..+..+..+.....++.+.+.+.+++.|++.+...+....++.+.
T Consensus 260 ~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 339 (408)
T PRK09874 260 SGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYN 339 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHh
Confidence 34555666777888889999999999999999998888877777777777788888888999999988888888888888
Q ss_pred cCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhHHHHHHHHHHhh
Q psy12153 110 FPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLPFVGFSLFYVWF 182 (236)
Q Consensus 110 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~~~~~~~~~~~~ 182 (236)
.+++.| ++..+.......+|..++|.+++.+. +|+..|++.++..++..++.++.
T Consensus 340 ~~~~~~------------------g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 397 (408)
T PRK09874 340 SSNQIA------------------GRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNS 397 (408)
T ss_pred CCcccc------------------eeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 888888 99999999999999999999988764 78999998888774544444443
No 109
>PRK12382 putative transporter; Provisional
Probab=99.24 E-value=2.7e-10 Score=99.57 Aligned_cols=133 Identities=11% Similarity=0.028 Sum_probs=111.2
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhhHHHHHHHHhh
Q psy12153 30 NAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQNSTYTLLIEL 109 (236)
Q Consensus 30 ~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~e~ 109 (236)
.++....+.++..++.++.|++.||+|||+.+..+..+..++.......++.+...+..++.|++.+...+.....+.|.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 330 (392)
T PRK12382 251 AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKR 330 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 45566677788889999999999999999999998888888887777778887777888899998888888778888999
Q ss_pred cCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhHHHHHHHHHH
Q psy12153 110 FPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLPFVGFSLFYV 180 (236)
Q Consensus 110 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~~~~~~~~~~ 180 (236)
+|+++| ++..+..+....+|..++|.+.+.+. +|+..|.+.+++.++..+...
T Consensus 331 ~~~~~~------------------g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 386 (392)
T PRK12382 331 VPSQVR------------------GTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTI 386 (392)
T ss_pred cCHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 999999 99999999999999999998888774 789999888877744444433
No 110
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.23 E-value=8.4e-11 Score=104.07 Aligned_cols=149 Identities=16% Similarity=0.117 Sum_probs=109.1
Q ss_pred eeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHH-----hc------cHHHHHH
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVY-----NR------SFPVYLI 86 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~-----~~------~~~~~~~ 86 (236)
+++++ +..+.++......++..++.++.|+++||+|||+.+.++..+.+++.++... .+ +...+..
T Consensus 312 ~~~g~---~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (481)
T TIGR00879 312 ENAGV---STDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVF 388 (481)
T ss_pred HHcCC---CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHH
Confidence 34555 6677788888899999999999999999999999999888777777666652 11 2222222
Q ss_pred HHHHHHHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHH
Q psy12153 87 LRTMQGFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRD 163 (236)
Q Consensus 87 ~~~l~g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~ 163 (236)
..++.+.......+....++.|.+|++.| +...++......+|.++++.+.+.+. +|++
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~------------------~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~ 450 (481)
T TIGR00879 389 ILLFIAFFAMGWGPVPWVIVSEIFPLSLR------------------PKGISIAVAANWLANFIVGFLFPTMLESIGVGG 450 (481)
T ss_pred HHHHHHHHHccccCeehhhhhccCChHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 22222222223345556777899988888 99999999999999999998877763 6888
Q ss_pred HHHHHHhHHHHHHHHHHhhcccch
Q psy12153 164 AELVTSLPFVGFSLFYVWFIPESP 187 (236)
Q Consensus 164 ~~~i~~~~~~~~~~~~~~~~pet~ 187 (236)
.|++.++++++..++..++.||++
T Consensus 451 ~f~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 451 VFIFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred eehhHHHHHHHHHHHHheecccCC
Confidence 888888887566666667778863
No 111
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.23 E-value=1.9e-10 Score=101.70 Aligned_cols=148 Identities=11% Similarity=-0.008 Sum_probs=90.9
Q ss_pred eeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHH---hccHH-HHHHHHHHHHH
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVY---NRSFP-VYLILRTMQGF 93 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~l~g~ 93 (236)
+++|+ +..+.+++.+++.++..++++++|+++||+|||++++++..+.++....... .+... .......+.++
T Consensus 39 ~~~g~---s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (420)
T PRK09528 39 DINGL---SGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGI 115 (420)
T ss_pred HhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45788 9999999999999999999999999999999999998866655544332211 11100 01111222222
Q ss_pred hhhhhhHHHHHHHHhhcC--ccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc--hhHHHHHHHH
Q psy12153 94 FVQGLQNSTYTLLIELFP--TRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP--NWRDAELVTS 169 (236)
Q Consensus 94 ~~~~~~~~~~~~~~e~~~--~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~--~w~~~~~i~~ 169 (236)
..+.........+.++.+ .+++ +...+.......+|..+++.+++.+. +|+..|++.+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~------------------g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~f~~~~ 177 (420)
T PRK09528 116 YLGFGFLAGAGAIEAYIERVSRRS------------------GFEYGRARMWGSLGWALCAFIAGILFNINPQINFWLGS 177 (420)
T ss_pred HhhhhhccchhhhhhHHHHHHhhc------------------cccchhhHHhhhHHHHHHHHHHHHHHhcCchHhHHHHH
Confidence 222222222222222222 1233 56667777777788888888777663 7899998888
Q ss_pred hHHHHHHHHHHhhcccc
Q psy12153 170 LPFVGFSLFYVWFIPES 186 (236)
Q Consensus 170 ~~~~~~~~~~~~~~pet 186 (236)
+..++..++.++..||.
T Consensus 178 ~~~~~~~~~~~~~~~~~ 194 (420)
T PRK09528 178 GSALILLVLLFFAKPDA 194 (420)
T ss_pred HHHHHHHHHHhcccccc
Confidence 77744444444444443
No 112
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.22 E-value=1.3e-10 Score=104.07 Aligned_cols=129 Identities=11% Similarity=0.080 Sum_probs=104.4
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhh--CchHHHHH--HHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhhHH
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRF--GRRVIMLI--SFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQNS 101 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~--Grr~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~ 101 (236)
+..+.++..++..++..++.++.|+++||. ++|+..++ +.++.++..+.....++.+.+++.+++.|++.+...+.
T Consensus 274 s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~ 353 (455)
T TIGR00892 274 DEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGAL 353 (455)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHH
Confidence 778889999999999999999999999983 34433333 33434444455556778888888899999998888888
Q ss_pred HHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc----hhHHHHHHHHhHH
Q psy12153 102 TYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP----NWRDAELVTSLPF 172 (236)
Q Consensus 102 ~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~----~w~~~~~i~~~~~ 172 (236)
...++.|..|++++ +...++.+....+|..++|.+.+.+. +|+..|++.++..
T Consensus 354 ~~~~~~~~~~~~~~------------------g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~ 410 (455)
T TIGR00892 354 LFEVLMDLVGAQRF------------------SSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIV 410 (455)
T ss_pred HHHHHHHHhhHHHH------------------hhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHH
Confidence 89999999999999 99999999999999999999988763 5888888877766
No 113
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.22 E-value=4.2e-10 Score=100.99 Aligned_cols=134 Identities=16% Similarity=0.062 Sum_probs=95.9
Q ss_pred eeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHH--HHHhccHHHHHHHHHHHHHhh
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIA--IVYNRSFPVYLILRTMQGFFV 95 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~g~~~ 95 (236)
+++|+ +..+.++..+...++..++.+.+|+++||+|||+.+.....+..+.... ....++.....+..++.|++.
T Consensus 287 ~~~g~---s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 363 (467)
T PRK09556 287 QELGF---SKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFALGFLV 363 (467)
T ss_pred HccCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 45666 8888899999999999999999999999999988776654443333222 223345555556777777654
Q ss_pred hhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHH-HHHHHHHHHHhcc---------------
Q psy12153 96 QGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTV-GLVMLSLVSYWFP--------------- 159 (236)
Q Consensus 96 ~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~l~~~i~~~~~--------------- 159 (236)
.+..........|.+|++.| +.+.++.+....+ |..++|.+.+.+.
T Consensus 364 ~~~~~~~~~~~~~~~p~~~~------------------g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~ 425 (467)
T PRK09556 364 FGPQLLIGVAAVGFVPKKAI------------------GVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLT 425 (467)
T ss_pred hhHHHHHHHHHHhhcchhhH------------------HHHHHHHHHHHHHHhHHHHhhhHHHHhccccccccccccccc
Confidence 33333334667799999999 9999999888776 6677776665553
Q ss_pred hhHHHHHHHHhHH
Q psy12153 160 NWRDAELVTSLPF 172 (236)
Q Consensus 160 ~w~~~~~i~~~~~ 172 (236)
+|+..|.+..+..
T Consensus 426 ~~~~~f~~~~~~~ 438 (467)
T PRK09556 426 GWAGTFAALDIAA 438 (467)
T ss_pred ChHHHHHHHHHHH
Confidence 3888888776665
No 114
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.21 E-value=3.7e-10 Score=97.36 Aligned_cols=151 Identities=13% Similarity=0.112 Sum_probs=126.2
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHH---HhccHHHHHHHHHHH
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIV---YNRSFPVYLILRTMQ 91 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~ 91 (236)
...+.||+ +..+.+++...++.++.+++++.+++.+|+|+|+.++.+..+.++++.+.. ...++..++++-++.
T Consensus 38 ~l~~~f~l---s~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFil 114 (422)
T COG0738 38 HLKEVFDL---TYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFIL 114 (422)
T ss_pred HHHHHhCc---cHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHH
Confidence 44567889 999999999999999999999999999999999999999999999999885 567888899999999
Q ss_pred HHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc------------
Q psy12153 92 GFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP------------ 159 (236)
Q Consensus 92 g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~------------ 159 (236)
|.|.+........++..+.+++.. ...+...+....+|..++|.++..+.
T Consensus 115 a~Gi~~LetaaNp~v~~lg~~~~a------------------~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~ 176 (422)
T COG0738 115 ASGIGLLETAANPYVTLLGKPESA------------------AFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQ 176 (422)
T ss_pred HhhhHHHHhccchHHHHhCCchhH------------------HHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHH
Confidence 999999999999999999998766 77789999999999999998887652
Q ss_pred ----------hhHHHHHHHHhHHHHHHHHHHhh-cccc
Q psy12153 160 ----------NWRDAELVTSLPFVGFSLFYVWF-IPES 186 (236)
Q Consensus 160 ----------~w~~~~~i~~~~~~~~~~~~~~~-~pet 186 (236)
.++++|...+...+++.+..... .|+.
T Consensus 177 ~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~ 214 (422)
T COG0738 177 ILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDL 214 (422)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcC
Confidence 25677777766664444333332 3543
No 115
>PRK09952 shikimate transporter; Provisional
Probab=99.21 E-value=7.7e-10 Score=98.57 Aligned_cols=142 Identities=14% Similarity=0.102 Sum_probs=96.6
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHH---hc-cHHHHHHHHHHHHHhhhhhhHH
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVY---NR-SFPVYLILRTMQGFFVQGLQNS 101 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~l~g~~~~~~~~~ 101 (236)
+.........+..+...++.+..|+++||+|||++++++.++..+....... .. +...++...++.+++.+...+.
T Consensus 284 s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 363 (438)
T PRK09952 284 PRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCV 363 (438)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444455556667788889999999999999988887665554433322 22 2333344556667777777777
Q ss_pred HHHHHHhhcCccccccccchhhhhhccccccchhhHHHH-HHHHHHHHHHHHHHHHhcc-----hhHHHHHHHHhHHHHH
Q psy12153 102 TYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVT-EICWTVGLVMLSLVSYWFP-----NWRDAELVTSLPFVGF 175 (236)
Q Consensus 102 ~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~l~~~i~~~~~-----~w~~~~~i~~~~~~~~ 175 (236)
...++.|.+|++.| +...++. ..+..+|+.++|.+.+++. +|+..+.+.++.. ++
T Consensus 364 ~~~~~~e~~p~~~r------------------~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~-~i 424 (438)
T PRK09952 364 QQPMFTEMFGASYR------------------YSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGC-LI 424 (438)
T ss_pred HHHHHHHHCCcchh------------------HHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHH-HH
Confidence 88999999999888 7666664 4455578888888877762 3777777666666 44
Q ss_pred HHHHHhhcccc
Q psy12153 176 SLFYVWFIPES 186 (236)
Q Consensus 176 ~~~~~~~~pet 186 (236)
..+..+.++|+
T Consensus 425 ~~v~~~~~~~~ 435 (438)
T PRK09952 425 SAMTALLMKDN 435 (438)
T ss_pred HHHHHHHcccc
Confidence 45555566775
No 116
>TIGR00898 2A0119 cation transport protein.
Probab=99.20 E-value=4e-10 Score=101.82 Aligned_cols=134 Identities=19% Similarity=0.132 Sum_probs=102.6
Q ss_pred HHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccH--HHHHHHHHHHHHhhhhhhHHHHHHHHhhcCc
Q psy12153 35 TLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSF--PVYLILRTMQGFFVQGLQNSTYTLLIELFPT 112 (236)
Q Consensus 35 ~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~g~~~~~~~~~~~~~~~e~~~~ 112 (236)
.+..+..+++.++.+++.||+|||+.+.++.++.+++.++....++. +...+..++.+++.+..++..+.+..|.+|+
T Consensus 362 ~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~ 441 (505)
T TIGR00898 362 FISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPT 441 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccH
Confidence 34456667788889999999999999999998888888877766543 4444555566666677778888888999999
Q ss_pred cccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc-hhHHHHHHHHhHHHHHHHHHHhhcccch
Q psy12153 113 RWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP-NWRDAELVTSLPFVGFSLFYVWFIPESP 187 (236)
Q Consensus 113 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~-~w~~~~~i~~~~~~~~~~~~~~~~pet~ 187 (236)
+.| +...++.+....+|.+++|.+.+... ++..++++.++.. ++..+..+++|||.
T Consensus 442 ~~r------------------~~~~g~~~~~~~ig~~i~p~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~lpet~ 498 (505)
T TIGR00898 442 VVR------------------NLGVGVCSTMARVGSIISPFLVYLGEKWLFLPLVLFGGLA-LLAGILTLFLPETK 498 (505)
T ss_pred HHH------------------hhhHhHHHHHHHHHHHHHhHHHHHHHHHHhhHHHHHHHHH-HHHHHHHHcCcCCC
Confidence 888 99999999999999999999887322 4456677777766 44445556789973
No 117
>KOG2504|consensus
Probab=99.19 E-value=1.4e-10 Score=104.93 Aligned_cols=151 Identities=17% Similarity=0.117 Sum_probs=127.9
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHH-HHHHHH
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLIL-RTMQGF 93 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~g~ 93 (236)
+..++++- +..+.+|+.++..-...+..++.+.+.||+|.|++.+.|.++.+++.++..++++.+.+++. -++.|+
T Consensus 71 ~~~~~f~~---s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~ 147 (509)
T KOG2504|consen 71 ELMDYFGS---SSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGL 147 (509)
T ss_pred HHHHHhCC---CccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhc
Confidence 34466776 88889999999999999999999999999999999999999999999999999999887765 577889
Q ss_pred hhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHh
Q psy12153 94 FVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSL 170 (236)
Q Consensus 94 ~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~ 170 (236)
|.+..+.....++..+|+ ++| +.+.++...+..+|.++-|.+...+. |||+.+++.+.
T Consensus 148 G~~~~~~paiviv~~YF~-kkR------------------~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~ 208 (509)
T KOG2504|consen 148 GLGLIYLPAVVILGTYFE-KKR------------------ALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGG 208 (509)
T ss_pred cchhhhcchhhhhhhHhH-HHH------------------HHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHH
Confidence 999988888888887775 568 89999999999999998888887774 89999998888
Q ss_pred HHHHHHHHHHhhcccch
Q psy12153 171 PFVGFSLFYVWFIPESP 187 (236)
Q Consensus 171 ~~~~~~~~~~~~~pet~ 187 (236)
+.+-..+.....-|.++
T Consensus 209 ~~l~~~~~~~~~rp~~~ 225 (509)
T KOG2504|consen 209 ISLNVLVAGALLRPLSP 225 (509)
T ss_pred HHHHHHHHHHHcCCCCc
Confidence 87455555555555443
No 118
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.18 E-value=7.6e-10 Score=99.29 Aligned_cols=151 Identities=17% Similarity=0.115 Sum_probs=113.0
Q ss_pred eeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhh----hhCchHHHHHH-HHHHHHHHHHHHHhccHH----------
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLAD----RFGRRVIMLIS-FYGQGAISIAIVYNRSFP---------- 82 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~D----r~Grr~~l~~~-~~~~~~~~~~~~~~~~~~---------- 82 (236)
+++++ +....+++..+..+...+.+++.|+++| |+|||+.++++ .+...++..+++++++..
T Consensus 32 ~~lg~---~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~ 108 (477)
T TIGR01301 32 QELGI---PHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKK 108 (477)
T ss_pred HHcCC---CHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhcccccccc
Confidence 45667 8899999999999999999999999999 59999988774 566666666666655432
Q ss_pred -------HHHHHHHHHHHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHH
Q psy12153 83 -------VYLILRTMQGFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVS 155 (236)
Q Consensus 83 -------~~~~~~~l~g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~ 155 (236)
..+++-.+..++.....+...++++|..|+++|.. +.+.++.+...++|+++++.++
T Consensus 109 ~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~----------------~~a~~~~~~~~~lG~ilg~~~g 172 (477)
T TIGR01301 109 TKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRT----------------RIANAYFSFFMAIGNVLGYAAG 172 (477)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHH----------------HHHHHHHHHHHHHHHHHHHHHH
Confidence 22223333344666677778899999999886510 4678888889999999998887
Q ss_pred Hhcc------------------hhHHHHHHHHhHHHHHHHHHHhhcccch
Q psy12153 156 YWFP------------------NWRDAELVTSLPFVGFSLFYVWFIPESP 187 (236)
Q Consensus 156 ~~~~------------------~w~~~~~i~~~~~~~~~~~~~~~~pet~ 187 (236)
+... +.+..|++.++..++..++..+..+|.|
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 173 AYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred HHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 6530 4577888888877667777888889975
No 119
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.16 E-value=7.7e-10 Score=100.19 Aligned_cols=132 Identities=19% Similarity=0.278 Sum_probs=81.8
Q ss_pred HHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhcc---HHHHHHHHHH-HHHhhhhhhHHHHHHHHhhcCc
Q psy12153 37 YFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRS---FPVYLILRTM-QGFFVQGLQNSTYTLLIELFPT 112 (236)
Q Consensus 37 ~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l-~g~~~~~~~~~~~~~~~e~~~~ 112 (236)
..++.+++.+..++++||+|||++++++..+.+++..+.....+ .......-.+ ..++..+..+..
T Consensus 344 ~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 413 (502)
T TIGR00887 344 ALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATT---------- 413 (502)
T ss_pred HHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchh----------
Confidence 44456668888999999999999998888777776665553211 1111111111 111111222333
Q ss_pred cccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcch-------------hHHHHHHHHhHHHHHHHHH
Q psy12153 113 RWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFPN-------------WRDAELVTSLPFVGFSLFY 179 (236)
Q Consensus 113 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~~-------------w~~~~~i~~~~~~~~~~~~ 179 (236)
|.|..|+||++.|++..++.+....+|.++++.+.+.+.+ +...|++.+++.++. .+.
T Consensus 414 --------~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~i~ 484 (502)
T TIGR00887 414 --------FIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLG-ILF 484 (502)
T ss_pred --------hhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHH-HHH
Confidence 4444444455555999999999999999999988776532 245677777776343 345
Q ss_pred Hhhcccch
Q psy12153 180 VWFIPESP 187 (236)
Q Consensus 180 ~~~~pet~ 187 (236)
.+++|||.
T Consensus 485 ~~~lpEt~ 492 (502)
T TIGR00887 485 TLLIPETK 492 (502)
T ss_pred heEeccCC
Confidence 57789983
No 120
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.16 E-value=1.9e-09 Score=97.06 Aligned_cols=147 Identities=19% Similarity=0.216 Sum_probs=125.1
Q ss_pred eeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCch--HHHHHHHHHHHHHHHHHHH--------hccHHHHHHH
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRR--VIMLISFYGQGAISIAIVY--------NRSFPVYLIL 87 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr--~~l~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 87 (236)
+++++ +..+...+..+..+..++|++++|++.||+|.| ++++.+.++..+.++...+ .++.+.+.+.
T Consensus 310 ~~lg~---s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~ 386 (477)
T PF11700_consen 310 EVLGM---STTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVL 386 (477)
T ss_pred HhcCc---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHH
Confidence 47888 899999999999999999999999999999999 8888888777666665555 6778888889
Q ss_pred HHHHHHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc----hhHH
Q psy12153 88 RTMQGFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP----NWRD 163 (236)
Q Consensus 88 ~~l~g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~----~w~~ 163 (236)
.++.|+..|..++..-++++|+.|+++. +..++++.+..-..+.+||++.+.+. +.|.
T Consensus 387 a~~~G~~~G~~qs~sRs~~~~LiP~g~e------------------~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~ 448 (477)
T PF11700_consen 387 AVLIGLFMGGIQSASRSLFSRLIPPGRE------------------AEFFGLYAITGKASSWLGPLLFGLITDATGSQRY 448 (477)
T ss_pred HHHHHHHhhhHHHHHHHHHHHhCCCchh------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchh
Confidence 9999999999999999999999999999 99999999999999999999888774 4677
Q ss_pred HHHHHHhHHHHHHHHHHhhcccc
Q psy12153 164 AELVTSLPFVGFSLFYVWFIPES 186 (236)
Q Consensus 164 ~~~i~~~~~~~~~~~~~~~~pet 186 (236)
.++...++. ++.++..+.+++.
T Consensus 449 g~~~l~~lf-~~gl~ll~~v~~~ 470 (477)
T PF11700_consen 449 GFLFLLVLF-LIGLILLFFVDVE 470 (477)
T ss_pred HHHHHHHHH-HHHHHHHhhccch
Confidence 777666666 5666666666654
No 121
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.15 E-value=1.2e-09 Score=96.91 Aligned_cols=85 Identities=11% Similarity=0.036 Sum_probs=72.0
Q ss_pred eeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCc-hHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhh
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGR-RVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQ 96 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Gr-r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~ 96 (236)
+++|+ +..+.|++.+++.++..++++++|.++||+|| |+++.++.++..+...+..+.++++.+.+.|++.|++.+
T Consensus 31 ~~~g~---s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 107 (418)
T TIGR00889 31 KTLHF---SGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLANSLAYM 107 (418)
T ss_pred HhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHc
Confidence 46778 99999999999999999999999999999965 778888888888888888888889999999999888766
Q ss_pred hhhHHHHHH
Q psy12153 97 GLQNSTYTL 105 (236)
Q Consensus 97 ~~~~~~~~~ 105 (236)
...+...++
T Consensus 108 ~~~~~~~~l 116 (418)
T TIGR00889 108 PTIALTNSI 116 (418)
T ss_pred cHHHHHHHH
Confidence 655554444
No 122
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.15 E-value=1.3e-09 Score=99.18 Aligned_cols=141 Identities=21% Similarity=0.175 Sum_probs=114.7
Q ss_pred cCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHH-----hccHHHHHHHHHHHHHhhhhhh
Q psy12153 25 HECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVY-----NRSFPVYLILRTMQGFFVQGLQ 99 (236)
Q Consensus 25 ~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~g~~~~~~~ 99 (236)
+|....+++.....+-..+.++++|.++||++||++++.+-++.++......+ ..+.+.+++..++.|++.+...
T Consensus 42 ~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~ 121 (524)
T PF05977_consen 42 GSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFN 121 (524)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHH
Confidence 37888899999999999999999999999999999999988777665544443 2467888888999999999999
Q ss_pred HHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhHHHHHH
Q psy12153 100 NSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLPFVGFS 176 (236)
Q Consensus 100 ~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~~~~~~ 176 (236)
|...+++.|+.|+++. ..++++.+...++...+||.+++.+. |-.+.|.+.++.. +..
T Consensus 122 PA~~A~ip~lV~~~~L------------------~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsf-l~~ 182 (524)
T PF05977_consen 122 PAWQAIIPELVPKEDL------------------PAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSF-LIS 182 (524)
T ss_pred HHHHHHHHHhccHhhH------------------HHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 9999999999999888 89999999999999999999998874 4566777666654 333
Q ss_pred HHHHhhcc
Q psy12153 177 LFYVWFIP 184 (236)
Q Consensus 177 ~~~~~~~p 184 (236)
+...+.++
T Consensus 183 i~~l~~~~ 190 (524)
T PF05977_consen 183 ILALLRWK 190 (524)
T ss_pred HHHHHHcc
Confidence 43444443
No 123
>PRK03699 putative transporter; Provisional
Probab=99.13 E-value=1.6e-09 Score=95.00 Aligned_cols=146 Identities=12% Similarity=0.066 Sum_probs=111.5
Q ss_pred eeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhh
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQG 97 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 97 (236)
+++++ +..+.+...+.+.++..++.+..|+++||+|||+.+.....+..+...+....++.+.+.+..++.|++.+.
T Consensus 234 ~~~g~---s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 310 (394)
T PRK03699 234 KKFGM---SLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSA 310 (394)
T ss_pred HHcCC---ChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHH
Confidence 34666 888899999999999999999999999999999998887777777666666667776666677788888777
Q ss_pred hhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhHHHH
Q psy12153 98 LQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLPFVG 174 (236)
Q Consensus 98 ~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~~~~ 174 (236)
.++....+..|..+. .+ +...+.......+|..++|.+.+.+. +++..+++.+++. +
T Consensus 311 ~~~~~~~~~~~~~~~-~~------------------~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~-~ 370 (394)
T PRK03699 311 IYTTIITLGSQQTKV-AS------------------PKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLY-A 370 (394)
T ss_pred HHHHHHHHHHHHccC-CC------------------HHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHH-H
Confidence 778777777787754 35 55667777778899999998888774 6788887777776 3
Q ss_pred HHHHHHhhcccc
Q psy12153 175 FSLFYVWFIPES 186 (236)
Q Consensus 175 ~~~~~~~~~pet 186 (236)
......+..++.
T Consensus 371 ~~~~~~~~~~~~ 382 (394)
T PRK03699 371 VVFVMCILLGFV 382 (394)
T ss_pred HHHHHHHHHHHH
Confidence 333334444443
No 124
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.13 E-value=2e-09 Score=94.52 Aligned_cols=148 Identities=14% Similarity=0.090 Sum_probs=111.2
Q ss_pred eeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhcc-HHHHHHHHHHHHHhhh
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRS-FPVYLILRTMQGFFVQ 96 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~g~~~~ 96 (236)
+++++ +..+.+...+++.++..++.+..+++.||+|||+.+..+..+..++.......++ .... ..++.|++.+
T Consensus 233 ~~~g~---s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~l~g~g~g 307 (393)
T PRK09705 233 IEIGA---SAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVL--WAMVCGLGLG 307 (393)
T ss_pred HHcCC---ChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHH--HHHHHHHhcc
Confidence 34556 8888899999999999999999999999999999998888777777665543332 2222 2345677777
Q ss_pred hhhHHHHHHHHhhcC-ccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc----hhHHHHHHHHhH
Q psy12153 97 GLQNSTYTLLIELFP-TRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP----NWRDAELVTSLP 171 (236)
Q Consensus 97 ~~~~~~~~~~~e~~~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~----~w~~~~~i~~~~ 171 (236)
...+.......+..+ +++| ++..+..+....++..++|.+.+++. +|...|.+.++.
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~------------------g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~ 369 (393)
T PRK09705 308 GAFPLCLLLALDHSVQPAIA------------------GKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALC 369 (393)
T ss_pred chHHHHHHHHHhhcCCHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHH
Confidence 777776666667764 5667 88899988888888888988888774 467777777777
Q ss_pred HHHHHHHHHhhcccchh
Q psy12153 172 FVGFSLFYVWFIPESPL 188 (236)
Q Consensus 172 ~~~~~~~~~~~~pet~~ 188 (236)
.++..+...++.||++.
T Consensus 370 ~~~~~~~~~~~~~~~~~ 386 (393)
T PRK09705 370 VVGLMIITLRFAPARFP 386 (393)
T ss_pred HHHHHHHHHHhcccccc
Confidence 75666666777888753
No 125
>PRK03545 putative arabinose transporter; Provisional
Probab=99.11 E-value=4.9e-09 Score=91.69 Aligned_cols=141 Identities=11% Similarity=0.044 Sum_probs=105.0
Q ss_pred eeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHH-HHHHhccHHHHHHHHHHHHHhhhhh
Q psy12153 20 WHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISI-AIVYNRSFPVYLILRTMQGFFVQGL 98 (236)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~g~~~~~~ 98 (236)
.++ +..+.+++.+...++..++.++.|+++||+|||+... +..+..++.. .....++.+.+.+..++.|++.+..
T Consensus 236 ~g~---s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~ 311 (390)
T PRK03545 236 AGL---SENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCI 311 (390)
T ss_pred cCC---CccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcc
Confidence 455 7788899999999999999999999999999887544 4444444433 3344566777777788888887666
Q ss_pred hHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhHHHHH
Q psy12153 99 QNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLPFVGF 175 (236)
Q Consensus 99 ~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~~~~~ 175 (236)
.+.....+.+..| +.| ++..+.......+|..+|+.+++.+. +++..|.+.+++.++.
T Consensus 312 ~~~~~~~~~~~~~-~~~------------------~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~ 372 (390)
T PRK03545 312 GLAMQVKVLKLAP-DAT------------------DVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAA 372 (390)
T ss_pred hHHHHHHHHHhCC-CcH------------------HHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHH
Confidence 6666777778766 577 88888888888889989988888764 6788888888777444
Q ss_pred HHHHHhhc
Q psy12153 176 SLFYVWFI 183 (236)
Q Consensus 176 ~~~~~~~~ 183 (236)
.++..+..
T Consensus 373 ~~~~~~~~ 380 (390)
T PRK03545 373 LVWSILIF 380 (390)
T ss_pred HHHHHHHc
Confidence 44444444
No 126
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.09 E-value=3e-09 Score=92.85 Aligned_cols=126 Identities=17% Similarity=0.081 Sum_probs=99.3
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhhHHHHHH
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQNSTYTL 105 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 105 (236)
+..+.++..+...++..+++++.|++.||+|||+.+..+.....++..... . .........+.|++.....|.....
T Consensus 233 s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~g~~~~~~~p~~~~~ 309 (381)
T PRK03633 233 SDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFILGAAGFTLYPVAMAW 309 (381)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 777888888899999999999999999999999998888777776655433 2 2233345666777666777888888
Q ss_pred HHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhHH
Q psy12153 106 LIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLPF 172 (236)
Q Consensus 106 ~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~~ 172 (236)
+.|..|++++ +...+.....+.+|..++|.+++.+. +|++.|.+.+.+.
T Consensus 310 ~~~~~~~~~~------------------~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~ 361 (381)
T PRK03633 310 ACEKVEHHEL------------------VAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVS 361 (381)
T ss_pred HHccCCHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHH
Confidence 8999988777 76777777888999999999888874 6788888777766
No 127
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.08 E-value=6.3e-09 Score=90.95 Aligned_cols=133 Identities=9% Similarity=-0.020 Sum_probs=112.7
Q ss_pred eeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhh
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQG 97 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 97 (236)
++.|. +..+.+...++..++..++.+..+++.||+|+|+.+.++.++..+.....+..++.+.++..+.+.|++.+.
T Consensus 233 ~~~g~---s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~ 309 (382)
T TIGR00902 233 QAAGI---SASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAV 309 (382)
T ss_pred HHCCC---CHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHH
Confidence 45666 888999999999999999999999999999999999999999999998888899999999999999999999
Q ss_pred hhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHH-HHHHHHHHHHHHHHHhcchh--HHHHHHHHhHH
Q psy12153 98 LQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTE-ICWTVGLVMLSLVSYWFPNW--RDAELVTSLPF 172 (236)
Q Consensus 98 ~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~l~~~i~~~~~~w--~~~~~i~~~~~ 172 (236)
..+....++.+. |+++| +...++++ ....+|..+++.+++.+.++ ...|++.+.+.
T Consensus 310 ~~~~~~~~i~~~-~~~~~------------------~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~~~~~~~~~~~ 368 (382)
T TIGR00902 310 CHLAAMRYIAAQ-PGSEI------------------AKLQALYNALAMGGLIAIFTAFAGFIYPTLGAGTFVFMAIIA 368 (382)
T ss_pred HHHHHHHHHHhC-CHhhH------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 999999999988 88888 88788765 56778888888888887532 24555666655
No 128
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.07 E-value=1.1e-08 Score=90.51 Aligned_cols=122 Identities=12% Similarity=0.129 Sum_probs=94.1
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHhhhhhhHHHHH
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYN-RSFPVYLILRTMQGFFVQGLQNSTYT 104 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~g~~~~~~~~~~~~ 104 (236)
+....++..++..++.+++.+++++++||+|||+++.++.++.+++.+...+. ++.+.+.+..++.|++.+...+...+
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 334 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWA 334 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556777788889999999999999999999999999988888777766654 35556667778888888888888899
Q ss_pred HHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc
Q psy12153 105 LLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF 158 (236)
Q Consensus 105 ~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~ 158 (236)
+++|..+.++. ..+.+.+|...++.+....+|..+++.+.+.+
T Consensus 335 ~~~~~~~~~~~-----------~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~l 377 (437)
T TIGR00792 335 LVADTVDYGEW-----------KTGVRAEGLVYSVRTFVRKLGQALAGFLVGLI 377 (437)
T ss_pred HHhhhhhhhhh-----------hcCccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998763321 01112228888999999999999988887765
No 129
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.05 E-value=4.3e-09 Score=90.66 Aligned_cols=132 Identities=16% Similarity=0.034 Sum_probs=91.8
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchH--HHH------HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhh
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRV--IML------ISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQG 97 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~--~l~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 97 (236)
+..+.+++.+...++..++.+..|+++||+|||+ ... .+.++..+........++.........+.+.+. +
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 327 (399)
T TIGR00893 249 SILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGL-G 327 (399)
T ss_pred cHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhch-h
Confidence 7778889999999999999999999999999986 111 111111111111111223333333333333333 3
Q ss_pred hhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---h-hHHHHHHHHhHHH
Q psy12153 98 LQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---N-WRDAELVTSLPFV 173 (236)
Q Consensus 98 ~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~-w~~~~~i~~~~~~ 173 (236)
..+....++.|.+|+++| +...++.+....+|..++|.+.+.+. + |+..+++.++..+
T Consensus 328 ~~~~~~~~~~~~~~~~~~------------------g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~ 389 (399)
T TIGR00893 328 AGAIGWALISDNAPGNIA------------------GLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALAL 389 (399)
T ss_pred hhhHHHHHHHhhcChhHH------------------HHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHH
Confidence 677888999999999999 99999999999999999999988774 4 8888887777663
Q ss_pred HHH
Q psy12153 174 GFS 176 (236)
Q Consensus 174 ~~~ 176 (236)
+..
T Consensus 390 ~~~ 392 (399)
T TIGR00893 390 IGA 392 (399)
T ss_pred HHH
Confidence 333
No 130
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.05 E-value=2.6e-09 Score=93.02 Aligned_cols=120 Identities=23% Similarity=0.213 Sum_probs=96.1
Q ss_pred eeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHH-HHHhccHHHHHHHHHHHHHhhhh
Q psy12153 19 LWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIA-IVYNRSFPVYLILRTMQGFFVQG 97 (236)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~g~~~~~ 97 (236)
++++ +..+.+++.+...++..++.++.|+++||+|||+.+..+..+..+.... ....++.+.+.+..++.++..+.
T Consensus 268 ~~g~---s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (405)
T TIGR00891 268 DLGL---SPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQG 344 (405)
T ss_pred HhCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHcc
Confidence 4566 7888899999999999999999999999999999988877665333332 23344555555666667766666
Q ss_pred hhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc
Q psy12153 98 LQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP 159 (236)
Q Consensus 98 ~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~ 159 (236)
..+....++.|.+|+++| ++..++.+....+|..++|.+.+.+.
T Consensus 345 ~~~~~~~~~~~~~~~~~~------------------~~~~g~~~~~~~~g~~~g~~~~g~l~ 388 (405)
T TIGR00891 345 IWGILPKHLGEYFPTDQR------------------AAGLGFTYQLGNLGGALAPIIGALLA 388 (405)
T ss_pred chhhHHHHHhhhCCcchh------------------HHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 677778899999999999 99999999999999999999888875
No 131
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.05 E-value=1.8e-09 Score=97.34 Aligned_cols=143 Identities=17% Similarity=0.102 Sum_probs=94.8
Q ss_pred eeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCch-------HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Q psy12153 19 LWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRR-------VIMLISFYGQGAISIAIVYNRSFPVYLILRTMQ 91 (236)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr-------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 91 (236)
++++ +..+.+...+++.++..++.+++|+++||+||| ..+.+...+.++..++....++.+...+..++.
T Consensus 282 ~~g~---s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~ 358 (476)
T PLN00028 282 RFGL---SLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILF 358 (476)
T ss_pred hcCC---CHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHH
Confidence 4566 788889999999999999999999999999875 222333333333334444455555444455555
Q ss_pred HHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc--chhHHHHHHHH
Q psy12153 92 GFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF--PNWRDAELVTS 169 (236)
Q Consensus 92 g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~--~~w~~~~~i~~ 169 (236)
+++.+...+....+..+..| +.| +...++......+|..+++.+...- .+|+..|++.+
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~-~~~------------------g~~~g~~~~~g~lg~~i~~~l~~~~~~~~y~~~f~~~~ 419 (476)
T PLN00028 359 SIFVQAACGATFGIVPFVSR-RSL------------------GVISGLTGAGGNVGAVLTQLLFFTGSSYSTETGISLMG 419 (476)
T ss_pred HHHHHHhhhhhcccCcccCh-hhc------------------hhhhhhhhccccHHHHHHHHHHHhcCCccHhhHHHHHH
Confidence 66554455555556666544 567 8889998888888888887765422 25888888887
Q ss_pred hHHHHHHHHHHhhcc
Q psy12153 170 LPFVGFSLFYVWFIP 184 (236)
Q Consensus 170 ~~~~~~~~~~~~~~p 184 (236)
++. +++.+..++++
T Consensus 420 ~~~-~i~~~~~~~~~ 433 (476)
T PLN00028 420 VMI-IACTLPVAFIH 433 (476)
T ss_pred HHH-HHHHHHHHhee
Confidence 776 44444445544
No 132
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.03 E-value=1.6e-08 Score=86.41 Aligned_cols=152 Identities=16% Similarity=0.115 Sum_probs=109.6
Q ss_pred eeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhh
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQG 97 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 97 (236)
+++++ +..+++.+....+....+...+.|.++||+|||+..+...++..++|+ +-..++++.++++|++.|++...
T Consensus 62 ~~yg~---~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GRvlgGiaTSL 137 (354)
T PF05631_consen 62 ESYGF---SEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGRVLGGIATSL 137 (354)
T ss_pred HHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHhccccHHHHHHHHHHHHHHHH
Confidence 34566 888999999999999999999999999999999999999999988886 56678999999999999999888
Q ss_pred hhHHHHHHH-HhhcCccccccccchhhhhhccccccchhhHHHHH-HHHHHHHHHHHHHHHhcch-----hHHHHHHHHh
Q psy12153 98 LQNSTYTLL-IELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTE-ICWTVGLVMLSLVSYWFPN-----WRDAELVTSL 170 (236)
Q Consensus 98 ~~~~~~~~~-~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~l~~~i~~~~~~-----w~~~~~i~~~ 170 (236)
.+..--+++ .|- ++| .||.++.+...+... ....+-.+++++++.++.+ -..+|....+
T Consensus 138 LfS~FEsW~V~Eh---~~~-----------g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~ 203 (354)
T PF05631_consen 138 LFSAFESWMVHEH---NKR-----------GFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIV 203 (354)
T ss_pred HHHHHHHHHHHHH---HHc-----------CCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHH
Confidence 877766644 343 122 356666555555444 3333344444555555432 3567777666
Q ss_pred HHHHHHHHHHhhcccch
Q psy12153 171 PFVGFSLFYVWFIPESP 187 (236)
Q Consensus 171 ~~~~~~~~~~~~~pet~ 187 (236)
+.++..+++....+|.+
T Consensus 204 ~l~~~~~~I~~~W~ENy 220 (354)
T PF05631_consen 204 LLAVAAVLILKTWPENY 220 (354)
T ss_pred HHHHHHHHHHhcccccC
Confidence 66555666666778864
No 133
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.02 E-value=3.7e-09 Score=91.79 Aligned_cols=147 Identities=16% Similarity=0.142 Sum_probs=126.5
Q ss_pred eeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhh
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQG 97 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 97 (236)
.++|+ +..+..++.....+..++|++++|+|.||+|.|+++..+.++..+.++...+......+.+.-.+.|.+.|+
T Consensus 281 ~~~gl---s~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~ 357 (438)
T COG2270 281 ADLGL---SSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGG 357 (438)
T ss_pred HHcCc---cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcch
Confidence 48899 999999999999999999999999999999999999999999999888888877777778888899999999
Q ss_pred hhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc----hhHHHHHHHHhHHH
Q psy12153 98 LQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP----NWRDAELVTSLPFV 173 (236)
Q Consensus 98 ~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~----~w~~~~~i~~~~~~ 173 (236)
.++..-++.++..|+++- +..++++++....++.++|.+.+.+. +-|.-+....++.
T Consensus 358 ~qA~SRSy~~~lvp~~k~------------------~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll- 418 (438)
T COG2270 358 AQASSRSYLARLVPKGKE------------------GRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLL- 418 (438)
T ss_pred HHHHHHHHHHHhCCCccc------------------cceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHH-
Confidence 999999999999999988 99999999999999999998877764 4465555555544
Q ss_pred HHHHHHHhhcccc
Q psy12153 174 GFSLFYVWFIPES 186 (236)
Q Consensus 174 ~~~~~~~~~~pet 186 (236)
+..++..+.+|+.
T Consensus 419 ~iGl~~L~~v~~~ 431 (438)
T COG2270 419 LIGLLLLLRVKVP 431 (438)
T ss_pred HhhHhhEEeecCC
Confidence 5666666777764
No 134
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.02 E-value=4.9e-09 Score=90.60 Aligned_cols=132 Identities=17% Similarity=0.189 Sum_probs=97.4
Q ss_pred eeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHH--HHHHH--hccHHHHHHHHHHHHHh
Q psy12153 19 LWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAIS--IAIVY--NRSFPVYLILRTMQGFF 94 (236)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~l~g~~ 94 (236)
++++ +..+.+.......++..++.++.|+++||+|||+.+.....+..+.. ..... .++.+......++.|++
T Consensus 249 ~~g~---~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 325 (394)
T TIGR00883 249 TLGL---SANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALI 325 (394)
T ss_pred hcCC---ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 4555 77888888999999999999999999999999998775554444333 12222 24556666677788888
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHH-HHHHHHHHHHHHHHHHHhcc---h-hHHHHHHHH
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWV-TEICWTVGLVMLSLVSYWFP---N-WRDAELVTS 169 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~l~~~i~~~~~---~-w~~~~~i~~ 169 (236)
.+...+....++.|.+|++.| ++..+. .+....+|..++|.+.+.+. + |+..++...
T Consensus 326 ~~~~~~~~~~~~~~~~p~~~~------------------~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~ 387 (394)
T TIGR00883 326 GGMYTGPMGSFLPELFPTEVR------------------YTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLA 387 (394)
T ss_pred HHHHhhhHHHHHHHhCCccce------------------eeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHH
Confidence 888888889999999999989 777776 45666678888888877763 3 666655544
Q ss_pred hH
Q psy12153 170 LP 171 (236)
Q Consensus 170 ~~ 171 (236)
+.
T Consensus 388 ~~ 389 (394)
T TIGR00883 388 AL 389 (394)
T ss_pred HH
Confidence 43
No 135
>KOG0253|consensus
Probab=99.01 E-value=1e-09 Score=93.73 Aligned_cols=132 Identities=17% Similarity=0.213 Sum_probs=101.2
Q ss_pred HHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcCccccc
Q psy12153 37 YFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQNSTYTLLIELFPTRWRI 116 (236)
Q Consensus 37 ~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~e~~~~~~r~ 116 (236)
..+....|.++.+++.||+|||+++....+++++..++.....+.....+..+...++..+.+...++|..|++|++.|
T Consensus 390 tslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavR- 468 (528)
T KOG0253|consen 390 TSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVR- 468 (528)
T ss_pred HHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhh-
Confidence 3445678999999999999999999999999999988888776666666666666666777788888999999999999
Q ss_pred cccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc-hhHHHHHHHHhHHHHHHHHHHhhcccc
Q psy12153 117 GVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP-NWRDAELVTSLPFVGFSLFYVWFIPES 186 (236)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~-~w~~~~~i~~~~~~~~~~~~~~~~pet 186 (236)
+...|..+.+..+|.++.|+++.... +-..+..+.+.+.++.++...++--||
T Consensus 469 -----------------atgvGtcSsmaRIggI~~p~iA~~~e~s~sl~i~vy~~~~ilagIavcffPiEt 522 (528)
T KOG0253|consen 469 -----------------ATGVGTCSSMARIGGIFSPVIAMRAELSTSLPIFVYGALFILAGIAVCFFPIET 522 (528)
T ss_pred -----------------hcchhhhhhHHhhhhhhhhHHHHHhccceeehHHHHHHHHHHHHHHheeeeecc
Confidence 99999999999999999999994333 223344555666634444444444455
No 136
>PRK10504 putative transporter; Provisional
Probab=99.00 E-value=1.6e-08 Score=90.51 Aligned_cols=116 Identities=12% Similarity=0.106 Sum_probs=94.2
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHhhhhhhHHH
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYN---RSFPVYLILRTMQGFFVQGLQNST 102 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~g~~~~~~~~~~ 102 (236)
+..+.++......++..++.++.++++||+|||+++..+..+..+...+.... ++.+.+.+..++.|++.+...+..
T Consensus 295 ~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 374 (471)
T PRK10504 295 SPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSM 374 (471)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 77788888888888888888999999999999999998888777776665543 233334445667788888788888
Q ss_pred HHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc
Q psy12153 103 YTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP 159 (236)
Q Consensus 103 ~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~ 159 (236)
..+..+..|++.| +...+..+....+|..+++.+.+.+.
T Consensus 375 ~~~~~~~~~~~~~------------------g~~~~~~~~~~~~g~~ig~~i~g~ll 413 (471)
T PRK10504 375 NTLTLKDLPDNLA------------------SSGNSLLSMIMQLSMSIGVTIAGLLL 413 (471)
T ss_pred HHHHHHcCCHHhc------------------cchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999989 99999999999999999988877663
No 137
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.99 E-value=1.9e-09 Score=95.35 Aligned_cols=142 Identities=16% Similarity=0.127 Sum_probs=118.1
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHHhhhhhhHHH
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRF-GRRVIMLISFYGQGAISIAIVYNR--SFPVYLILRTMQGFFVQGLQNST 102 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~-Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~g~~~~~~~~~~ 102 (236)
++++..-+.+.|.-..-+..+++||++||+ |+|+++..+.++..++.+..+..+ ....+.++-.+.++|.|..-+..
T Consensus 59 ~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~Ni 138 (498)
T COG3104 59 DETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNI 138 (498)
T ss_pred ChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccH
Confidence 777777777777777778899999999997 999999999999999999999884 67778888888889999999999
Q ss_pred HHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhHHHHHHHHH
Q psy12153 103 YTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLPFVGFSLFY 179 (236)
Q Consensus 103 ~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~~~~~~~~~ 179 (236)
.+++.|.+|+++. | |-..+++...+.++|++++|.+.+++. +|+..|...++-. ..+++.
T Consensus 139 S~llg~ly~~~Dp---------------r-rD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm-~~gl~~ 201 (498)
T COG3104 139 SSLLGELYPKDDP---------------R-RDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGM-IIGLVI 201 (498)
T ss_pred HHHHHHhcCCCCc---------------c-cCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHH-HHHHHH
Confidence 9999999987764 1 367788888899999999999999885 7888887766655 555555
Q ss_pred Hhhcc
Q psy12153 180 VWFIP 184 (236)
Q Consensus 180 ~~~~p 184 (236)
+.+.+
T Consensus 202 f~~~~ 206 (498)
T COG3104 202 FLLGR 206 (498)
T ss_pred HHHcc
Confidence 55544
No 138
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.98 E-value=2.4e-08 Score=87.54 Aligned_cols=138 Identities=19% Similarity=0.167 Sum_probs=106.2
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhhHHHHHH
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQNSTYTL 105 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 105 (236)
+....+...++..+...++.+..+++.||+|||+.+.++..+.++........++.+.+.+..++.|++..........+
T Consensus 252 ~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 331 (396)
T TIGR00882 252 GTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKY 331 (396)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556778888888888899999999999999999999888888877776777888888888888888866555555566
Q ss_pred HHhhcCccccccccchhhhhhccccccchhhHHH-HHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhHHHHHHHHHHh
Q psy12153 106 LIELFPTRWRIGVATYTLLIELFPTRWRIGVAWV-TEICWTVGLVMLSLVSYWFP---NWRDAELVTSLPFVGFSLFYVW 181 (236)
Q Consensus 106 ~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~~~~~~~~~~~ 181 (236)
..+..+++.+ +...+. .+....+|..+++.+.+++. ||+..|.+.+++.++..+...+
T Consensus 332 ~~~~~~~~~~------------------at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 332 ITSQFDVRLS------------------ATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred HHHhCCcceE------------------EEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 6777776666 665554 56788889999888887774 6788898888877555554433
No 139
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.97 E-value=1.3e-08 Score=89.72 Aligned_cols=116 Identities=18% Similarity=0.166 Sum_probs=85.2
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh--hhhhhHHHH
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFF--VQGLQNSTY 103 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~--~~~~~~~~~ 103 (236)
+..+.+...+...++..++.++.|+++||+|||+.+..+.++..+..+.....++.....+.-.+.|.+ ..+..+...
T Consensus 264 ~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (426)
T PRK12307 264 DTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVP 343 (426)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHH
Confidence 667778888888999999999999999999999999888877666655444332222122222333332 223344556
Q ss_pred HHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc
Q psy12153 104 TLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP 159 (236)
Q Consensus 104 ~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~ 159 (236)
.++.|.+|++.| ++..++......+|..++|.+.+++.
T Consensus 344 ~~~~~~~p~~~~------------------g~~~g~~~~~~~~~~~~gp~~~g~l~ 381 (426)
T PRK12307 344 KFLYDYFPLEVR------------------GLGTGLIYNLAATSGTFNSMAATWLG 381 (426)
T ss_pred HHHHHhCcHHHH------------------hhhhhHHHHHHhHHHHHHHHHHHHHH
Confidence 778899999888 99999998888999999999888775
No 140
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.97 E-value=3.3e-08 Score=86.97 Aligned_cols=136 Identities=16% Similarity=0.212 Sum_probs=97.5
Q ss_pred eeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHH-HHHHHHHHHHHHHHH-----hccHHHHHHHHHHH
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIML-ISFYGQGAISIAIVY-----NRSFPVYLILRTMQ 91 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~ 91 (236)
+++++ +..+.+++.+...++..++.+..|+++||+|||+.+. .+.+...+....... .++.+...+..++.
T Consensus 250 ~~~g~---s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 326 (402)
T TIGR00897 250 AELGF---STSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIAL 326 (402)
T ss_pred HHcCC---ChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHH
Confidence 44566 7777888888899999999999999999999888764 333333333332221 23555666677778
Q ss_pred HHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHH
Q psy12153 92 GFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVT 168 (236)
Q Consensus 92 g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~ 168 (236)
|++.+...+ ....+.|..| ++| ++..++.+....+|..++|.+.+.+. +|...+++.
T Consensus 327 G~~~~~~~~-~~~~~~~~~~-~~~------------------g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~ 386 (402)
T TIGR00897 327 GIFLAGYVP-LAAVFPTLAP-KHK------------------GAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIF 386 (402)
T ss_pred HHHHHHHHH-HHHHHHhhCc-chh------------------HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHH
Confidence 887766544 3455667654 578 99999999999999999998887764 677888877
Q ss_pred HhHHHHHH
Q psy12153 169 SLPFVGFS 176 (236)
Q Consensus 169 ~~~~~~~~ 176 (236)
+++.++..
T Consensus 387 a~~~~i~~ 394 (402)
T TIGR00897 387 AALYVVSA 394 (402)
T ss_pred HHHHHHHH
Confidence 77663333
No 141
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.97 E-value=3.6e-08 Score=88.17 Aligned_cols=136 Identities=17% Similarity=0.089 Sum_probs=87.5
Q ss_pred eeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhh--CchHHHH-HHHHHHHHHHHHHHH--hccHHHHHHHHHHHHH
Q psy12153 19 LWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRF--GRRVIML-ISFYGQGAISIAIVY--NRSFPVYLILRTMQGF 93 (236)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~--Grr~~l~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~g~ 93 (236)
+.++ +..+.++...++.++..++.+++|+++||+ |||.... ....+..++...... ..+.+...+..+..|.
T Consensus 283 ~~g~---s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 359 (452)
T PRK11273 283 VKHF---ALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGF 359 (452)
T ss_pred hcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHH
Confidence 3455 667788888888899999999999999999 5554332 222222232222222 2234334444444454
Q ss_pred hhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHH-HHHHHHhcc---hhHHHHHHHH
Q psy12153 94 FVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVM-LSLVSYWFP---NWRDAELVTS 169 (236)
Q Consensus 94 ~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l-~~~i~~~~~---~w~~~~~i~~ 169 (236)
...........+..|.+|++.| ++..++.+....+|..+ +|.+.+.+. +|+..|.+.+
T Consensus 360 ~~~~~~~~~~~~~~~~~p~~~~------------------g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~ 421 (452)
T PRK11273 360 LIYGPVMLIGLHALELAPKKAA------------------GTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMI 421 (452)
T ss_pred HHHhHHHHHHHHHHHHcChhhh------------------hhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHH
Confidence 3323233334567799999889 99999998877777654 677777664 7888888777
Q ss_pred hHHHHH
Q psy12153 170 LPFVGF 175 (236)
Q Consensus 170 ~~~~~~ 175 (236)
..+++.
T Consensus 422 ~~~~~~ 427 (452)
T PRK11273 422 GGSILA 427 (452)
T ss_pred HHHHHH
Confidence 766333
No 142
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.96 E-value=1.4e-08 Score=87.03 Aligned_cols=118 Identities=19% Similarity=0.165 Sum_probs=104.0
Q ss_pred eeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhcc-HHHHHHHHHHHHHhhhhh
Q psy12153 20 WHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRS-FPVYLILRTMQGFFVQGL 98 (236)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~g~~~~~~ 98 (236)
++. +..+.++......++..++.++.+++.||+|||+.+..+..+.++........++ .+.+.+..++.|++.+..
T Consensus 242 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 318 (365)
T TIGR00900 242 LGR---GSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPI 318 (365)
T ss_pred hCC---chHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHH
Confidence 455 7888899999999999999999999999999999998888777777777777664 777788889999998888
Q ss_pred hHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc
Q psy12153 99 QNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF 158 (236)
Q Consensus 99 ~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~ 158 (236)
.+....++.|..|+++| ++..+..+....+|..+++.+.+.+
T Consensus 319 ~~~~~~~~~~~~~~~~~------------------g~~~~~~~~~~~~~~~~g~~~~g~l 360 (365)
T TIGR00900 319 NVPQGTLLQRRVPAELL------------------GRVFGAQFSLSHAAWPLGLILAGPL 360 (365)
T ss_pred HHHHHHHHHHhCCHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88889999999999999 9999999999999999999887765
No 143
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.96 E-value=3.1e-08 Score=87.97 Aligned_cols=144 Identities=15% Similarity=0.014 Sum_probs=85.3
Q ss_pred eeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHH--H--hccHHHHHHHHHHHHHh
Q psy12153 19 LWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIV--Y--NRSFPVYLILRTMQGFF 94 (236)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~l~g~~ 94 (236)
++++ +..+.+...++..++..++.++.|+++||+|||+.++++.++..+...... . .++....+..-.+....
T Consensus 273 ~~g~---s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (432)
T PRK10406 273 TAGM---HANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLI 349 (432)
T ss_pred hcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHH
Confidence 3455 677778888888888888899999999999999988776654433332221 1 12222222222222222
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHH-HHHHHHHHHHhcc--h-hHHHHHHHHh
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTV-GLVMLSLVSYWFP--N-WRDAELVTSL 170 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~l~~~i~~~~~--~-w~~~~~i~~~ 170 (236)
.+...+....+.+|++|++.| +...++.+...++ .....|.+...+. + |...+++.++
T Consensus 350 ~~~~~~~~~~~~~e~fp~~~r------------------~t~~g~~~~~g~~~~g~~~p~~~~~l~~~g~~~~~~~~~~~ 411 (432)
T PRK10406 350 VSFYTSISGILKAEMFPAQVR------------------ALGVGLSYAVANALFGGSAEYVALSLKSIGMETAFFWYVTL 411 (432)
T ss_pred HHHHHHHHHHHHHHHCCCCcc------------------chhhhHHHHHHHHHHHhHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 333344566788899999888 8888887654333 2334666555553 3 4445555555
Q ss_pred HHHHHHHHHHhhcc
Q psy12153 171 PFVGFSLFYVWFIP 184 (236)
Q Consensus 171 ~~~~~~~~~~~~~p 184 (236)
.. ++..+..++++
T Consensus 412 ~~-~i~~~~~~~l~ 424 (432)
T PRK10406 412 MA-VVAFLVSLMLH 424 (432)
T ss_pred HH-HHHHHHHHHhh
Confidence 54 44444444443
No 144
>TIGR00895 2A0115 benzoate transport.
Probab=98.95 E-value=1.2e-08 Score=88.46 Aligned_cols=114 Identities=26% Similarity=0.353 Sum_probs=93.0
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHhhhhhhHHHHH
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIV-YNRSFPVYLILRTMQGFFVQGLQNSTYT 104 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~g~~~~~~~~~~~~ 104 (236)
+..+.++..+...++..++.++.++++||+|||+.+.... +..+...+.. ..++.+...+..++.|++.+...+....
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 361 (398)
T TIGR00895 283 SLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLL-LGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYA 361 (398)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHH-HHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7778889999999999999999999999999995544443 3333333333 3556666777788889998888888999
Q ss_pred HHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc
Q psy12153 105 LLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF 158 (236)
Q Consensus 105 ~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~ 158 (236)
++.|.+|+++| +...++......+|..++|.+.+.+
T Consensus 362 ~~~~~~~~~~~------------------g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 362 LMALFYPTAIR------------------ATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHhhcCCHHHH------------------HHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 99999999999 9999999999999999999887754
No 145
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.95 E-value=3.3e-08 Score=89.52 Aligned_cols=146 Identities=16% Similarity=0.120 Sum_probs=103.3
Q ss_pred eeeeeecCcchhHHHHH-HHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHH---HHh-ccHHHHHHHHHHHHH
Q psy12153 19 LWHLYHHECKWNAAVVT-LYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAI---VYN-RSFPVYLILRTMQGF 93 (236)
Q Consensus 19 ~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~l~g~ 93 (236)
++|+ +..+.++... ...++.+++.+++|+++||+|||+.+.++.++.++..... ... ++...+.+..++..+
T Consensus 252 ~~G~---s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~ 328 (491)
T PRK11010 252 GVGF---DAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENL 328 (491)
T ss_pred hcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHH
Confidence 4566 8888898874 5668999999999999999999888777666555544322 222 344444444555555
Q ss_pred hhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHh
Q psy12153 94 FVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSL 170 (236)
Q Consensus 94 ~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~ 170 (236)
+.+...+...++..+..+++.+ +...++.+....+|..+++.+.+.+. ||+..|.+.++
T Consensus 329 ~~g~~~~~~~a~~~~l~~~~~~------------------~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~ 390 (491)
T PRK11010 329 CGGMGTAAFVALLMTLCNKSFS------------------ATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVA 390 (491)
T ss_pred HHHHHHHHHHHHHHHHcCCCCc------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHH
Confidence 5555556667888899988888 88888888888888887777766653 78888888887
Q ss_pred HHHHHHHHHHhhcccc
Q psy12153 171 PFVGFSLFYVWFIPES 186 (236)
Q Consensus 171 ~~~~~~~~~~~~~pet 186 (236)
+. +.+++....++++
T Consensus 391 ~~-l~~l~~~~~~~~~ 405 (491)
T PRK11010 391 AA-VPGLLLLLVCRQT 405 (491)
T ss_pred HH-HHHHHHHHHHHhc
Confidence 77 4444444444544
No 146
>PRK15075 citrate-proton symporter; Provisional
Probab=98.95 E-value=3.1e-08 Score=88.07 Aligned_cols=118 Identities=17% Similarity=0.154 Sum_probs=80.1
Q ss_pred eeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHH-H-H--HhccHHHHHHHHHHHHHhh
Q psy12153 20 WHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIA-I-V--YNRSFPVYLILRTMQGFFV 95 (236)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~-~-~--~~~~~~~~~~~~~l~g~~~ 95 (236)
+++ +..+.++....+.++..++.+++|+++||+|||+.++++..+..+.... . . ..++.........+.+++.
T Consensus 269 ~g~---~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (434)
T PRK15075 269 LHL---SAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLY 345 (434)
T ss_pred cCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHH
Confidence 455 7777888888888999999999999999999999888765544332221 1 1 1223333334445556666
Q ss_pred hhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHH-HHHHHHHHHHHHHHHHhc
Q psy12153 96 QGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVT-EICWTVGLVMLSLVSYWF 158 (236)
Q Consensus 96 ~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~l~~~i~~~~ 158 (236)
+...+....+..|.+|++.| +...++. +++..+++.++|.+.+.+
T Consensus 346 g~~~~~~~~~~~e~~p~~~r------------------g~~~g~~~~~~~~~~g~~~p~~~g~i 391 (434)
T PRK15075 346 GSYNGAMVVALTEVMPAEVR------------------TAGFSLAYSLATAIFGGFTPAISTWL 391 (434)
T ss_pred HHHHhhHHHHHHHHCCCCcc------------------chheeHHHHHHHHHHhhhHHHHHHHH
Confidence 66666667788999999988 8877774 334444456677766655
No 147
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.94 E-value=1.4e-08 Score=100.28 Aligned_cols=147 Identities=16% Similarity=0.143 Sum_probs=115.1
Q ss_pred eeeeeecCcc-hhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhh
Q psy12153 19 LWHLYHHECK-WNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQG 97 (236)
Q Consensus 19 ~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 97 (236)
++++ +.. ..+++.+...++.++++++.++++||+++|+++.++.++.+++.++..+..+.+.+++..++.|++.+.
T Consensus 262 ~~g~---s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 338 (1146)
T PRK08633 262 VLGL---DNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGL 338 (1146)
T ss_pred HhCC---CcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 3555 667 889999999999999999999999999999998888888888888777777888888888889998888
Q ss_pred hhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc----hhHHHHHHHHhHHH
Q psy12153 98 LQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP----NWRDAELVTSLPFV 173 (236)
Q Consensus 98 ~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~----~w~~~~~i~~~~~~ 173 (236)
..+...+++.+..|++.| +...++.+....+|.++++.++..+. ++...+++.+.+.+
T Consensus 339 ~~~~~~~~~~~~~p~~~r------------------g~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 400 (1146)
T PRK08633 339 FIVPLNALIQFRAPEKEL------------------GKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTL 400 (1146)
T ss_pred hhHHHHHHHhhcCCccch------------------hhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 888888999999999999 99999999888888877776666553 34445555555443
Q ss_pred HHHHHHHhhcccc
Q psy12153 174 GFSLFYVWFIPES 186 (236)
Q Consensus 174 ~~~~~~~~~~pet 186 (236)
+..++..+.+|++
T Consensus 401 ~~~~~~~~~~~~~ 413 (1146)
T PRK08633 401 IGTLYTLLLLPDS 413 (1146)
T ss_pred HHHHHHHHHhHHH
Confidence 3334444445554
No 148
>KOG0254|consensus
Probab=98.92 E-value=1.9e-08 Score=91.55 Aligned_cols=161 Identities=18% Similarity=0.162 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhhHHHHHHHHhhc
Q psy12153 31 AAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQNSTYTLLIELF 110 (236)
Q Consensus 31 ~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~e~~ 110 (236)
.+...+..+...++.+++..+.||+|||+.++.+.....++.++.+........... ....... ........++. .+
T Consensus 332 ~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~v~-~f 408 (513)
T KOG0254|consen 332 FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPN-SSKGAGW-LAIVFLCLFIF-SF 408 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCC-cccchhH-HHHHHHHHHHH-HH
Confidence 556666777778888888999999999999999999999998877753211100000 0000000 00000001111 11
Q ss_pred CccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcchh---HHHHHHHHhHHHHHHH-HHHhhcccc
Q psy12153 111 PTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFPNW---RDAELVTSLPFVGFSL-FYVWFIPES 186 (236)
Q Consensus 111 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~~w---~~~~~i~~~~~~~~~~-~~~~~~pet 186 (236)
..-+++.+|++.+|+||.+.|+.+.++......+.+.+..........+ ...|...+..+.+... ..++++|||
T Consensus 409 --~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pET 486 (513)
T KOG0254|consen 409 --AIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPET 486 (513)
T ss_pred --hcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEcccC
Confidence 1125666777888888888889999888777777666655544444332 4566666666545556 788899998
Q ss_pred hhHHHhcCCHhHHHHH
Q psy12153 187 PLWKYTKNKIIDFEYL 202 (236)
Q Consensus 187 ~~~~~~~~~~~~~~~~ 202 (236)
|++..++.+.
T Consensus 487 ------kg~sleei~~ 496 (513)
T KOG0254|consen 487 ------KGLTLEEINE 496 (513)
T ss_pred ------CCCcHHHHHH
Confidence 6665554444
No 149
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.92 E-value=8.6e-09 Score=93.76 Aligned_cols=133 Identities=19% Similarity=0.149 Sum_probs=115.9
Q ss_pred eeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhh
Q psy12153 19 LWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGL 98 (236)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 98 (236)
+++. +....|++.+.+.+|.++|++..+.+.+|+++++.+..+.++.++..+..++.++.+..++..++.|++....
T Consensus 248 ~l~~---~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~ 324 (524)
T PF05977_consen 248 VLGG---GASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGAAWIIA 324 (524)
T ss_pred HhCC---cHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 4555 8889999999999999999999999999999999999999999999999999999998888889999998888
Q ss_pred hHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhHH
Q psy12153 99 QNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLPF 172 (236)
Q Consensus 99 ~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~~ 172 (236)
.....+.+.+..|++.| |+.+++++.....+..+|..+.+.+. +.+..+.+.++..
T Consensus 325 ~~~~~t~~Q~~~P~~~~------------------GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~l 383 (524)
T PF05977_consen 325 NSSLNTLVQLSVPDWVR------------------GRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAAL 383 (524)
T ss_pred HHHHHHHHHHhCCHHHH------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 88888999999999999 99999999888888888888887775 4566666665544
No 150
>PRK09848 glucuronide transporter; Provisional
Probab=98.90 E-value=1.4e-07 Score=84.24 Aligned_cols=122 Identities=11% Similarity=0.058 Sum_probs=89.7
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHHhhhhhhHHHH
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNR--SFPVYLILRTMQGFFVQGLQNSTY 103 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~g~~~~~~~~~~~ 103 (236)
+....++......++..++.++.++++||+|+|+++.++.++..++.+...+.+ +.+.+.+..++.|++.+...+...
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~ 341 (448)
T PRK09848 262 TGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMW 341 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444444667788999999999999999999999888888777666543 455566667788999888888889
Q ss_pred HHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc
Q psy12153 104 TLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF 158 (236)
Q Consensus 104 ~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~ 158 (236)
++.+|..+.++. -.+.|..|...+..++...+|..+++.+.+.+
T Consensus 342 al~~~~~~~~~~-----------~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~ 385 (448)
T PRK09848 342 ALEADTVEYGEY-----------LTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFI 385 (448)
T ss_pred HHHHHhhhhhHH-----------hhCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999875431 01112227888888888889998888776654
No 151
>PRK09669 putative symporter YagG; Provisional
Probab=98.88 E-value=3.3e-08 Score=88.16 Aligned_cols=148 Identities=13% Similarity=0.083 Sum_probs=101.6
Q ss_pred eeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhh----hCc-hHHHHHHHHHHHHHHHHHHHhcc------HHHHHH
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADR----FGR-RVIMLISFYGQGAISIAIVYNRS------FPVYLI 86 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr----~Gr-r~~l~~~~~~~~~~~~~~~~~~~------~~~~~~ 86 (236)
+++++ +....+.+.++..+...+..++.|+++|| +|| |+.++++.+..++...+....++ ...+++
T Consensus 38 ~~~gl---s~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~ 114 (444)
T PRK09669 38 DVFGL---SAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACV 114 (444)
T ss_pred HhcCC---CHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHH
Confidence 46788 99999999999999999999999999999 777 56666777777777665555443 233344
Q ss_pred HHHHHHHhhhhhhHHHHHHHHhhc-CccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHH----Hhc---
Q psy12153 87 LRTMQGFFVQGLQNSTYTLLIELF-PTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVS----YWF--- 158 (236)
Q Consensus 87 ~~~l~g~~~~~~~~~~~~~~~e~~-~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~----~~~--- 158 (236)
...+.+.+.........++.+|+. ++++| .+..+.......+|..+++.+. ..+
T Consensus 115 ~~~l~~~~~t~~~ip~~al~~~~t~~~~eR------------------~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~ 176 (444)
T PRK09669 115 TYILLSLVYTAINVPYCAMPGAITNDPRER------------------HSLQSWRFALSFIGGLIVSVIALPLVDILGKG 176 (444)
T ss_pred HHHHHHHHHHhhcchHHHhHHHhcCCHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 444555555555555678888987 45667 7777777777777766665432 222
Q ss_pred ---chhHHHHHHHHhHHHHHHHHHHhhcccc
Q psy12153 159 ---PNWRDAELVTSLPFVGFSLFYVWFIPES 186 (236)
Q Consensus 159 ---~~w~~~~~i~~~~~~~~~~~~~~~~pet 186 (236)
.+|+..+.+.+++..+..+..++..+|.
T Consensus 177 ~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~ 207 (444)
T PRK09669 177 DEQKGYFYAMMVMGLLGVVLFFCCFFMTKER 207 (444)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHhCCeEEe
Confidence 1577777777777645555555666664
No 152
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.88 E-value=5.1e-08 Score=86.73 Aligned_cols=146 Identities=18% Similarity=0.098 Sum_probs=93.2
Q ss_pred eeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhh--C-chHHHHHHHHHHHHHHHHHH--HhccHHHHHHHHHHHHH
Q psy12153 19 LWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRF--G-RRVIMLISFYGQGAISIAIV--YNRSFPVYLILRTMQGF 93 (236)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~--G-rr~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~g~ 93 (236)
++++ +..+.+...+.+.++..++.++.|+++||+ + ||.......+...+...... ...+........+..|+
T Consensus 273 ~~g~---s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 349 (434)
T PRK11663 273 TLGV---DLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFASYVMQAACFFTIGF 349 (434)
T ss_pred ccCC---CHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHH
Confidence 4455 778888899999999999999999999999 3 33332222111111111111 12233223233333444
Q ss_pred hhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHh
Q psy12153 94 FVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSL 170 (236)
Q Consensus 94 ~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~ 170 (236)
+.............|.+|++.| +...++.+....+|..++|.+.+.+. +|+..|++.++
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~------------------g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~ 411 (434)
T PRK11663 350 FVFGPQMLIGMAAAECSHKEAA------------------GAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISI 411 (434)
T ss_pred HHhhHHHHHHHHHHhcccHhhH------------------HhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHH
Confidence 3322233334567888888888 99999999999999999998887764 68888888887
Q ss_pred HHHHHHHHHHhhccc
Q psy12153 171 PFVGFSLFYVWFIPE 185 (236)
Q Consensus 171 ~~~~~~~~~~~~~pe 185 (236)
+.++..+...+..++
T Consensus 412 ~~~~~~~~~~~~~~~ 426 (434)
T PRK11663 412 AAGISALLLLPFLNA 426 (434)
T ss_pred HHHHHHHHHHHHHhh
Confidence 774444444444433
No 153
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.88 E-value=3e-07 Score=82.76 Aligned_cols=117 Identities=7% Similarity=-0.092 Sum_probs=87.2
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHH-----hccHHHHHHHHHHHHHhhhhhhH
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVY-----NRSFPVYLILRTMQGFFVQGLQN 100 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~g~~~~~~~~ 100 (236)
+....++..++..++.+++.+++++++||+|+|+.++++..+..++.+.... .++.+.+++..++.|++.+...+
T Consensus 264 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~ 343 (473)
T PRK10429 264 DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWV 343 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHH
Confidence 4455666777777888999999999999999999998888776655554432 23455666667788888888888
Q ss_pred HHHHHHHhhcCcc-----ccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc
Q psy12153 101 STYTLLIELFPTR-----WRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF 158 (236)
Q Consensus 101 ~~~~~~~e~~~~~-----~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~ 158 (236)
...++++|..+.+ +|. .|...+...+..-+|..+++.+.+.+
T Consensus 344 ~~~am~ad~id~~e~~tG~R~----------------~G~~~s~~~~~~K~~~al~~~i~g~~ 390 (473)
T PRK10429 344 LQVIMVADTVDYGEYKLGIRC----------------ESIAYSVQTMVVKGGSAFAAFFIGVV 390 (473)
T ss_pred HHHHHHhhhhhhhhHhcCccc----------------hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999996632 331 16678888888888888887776654
No 154
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.84 E-value=1.1e-07 Score=81.20 Aligned_cols=136 Identities=18% Similarity=0.115 Sum_probs=119.2
Q ss_pred CcceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Q psy12153 14 GEPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGF 93 (236)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 93 (236)
+++.+|+++ +.+..|+++++..+...+.++...+++.|+|.++.+.+++++.+++..+-... +.+.++.+..+.|.
T Consensus 36 ~~Ir~~~gl---s~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~~~L~~gt~l~G~ 111 (395)
T COG2807 36 DEIRQDLGL---SFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GLPLLFLGTLLAGA 111 (395)
T ss_pred HHHHHHhcc---cHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHh
Confidence 467789999 99999999999999999999999999999999999999999999999988887 77788889999999
Q ss_pred hhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc----chhHHHHHHHH
Q psy12153 94 FVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF----PNWRDAELVTS 169 (236)
Q Consensus 94 ~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~----~~w~~~~~i~~ 169 (236)
+.+......+..+-+-||++ - +.+++.+.....+|..+++.++..+ .+||....+-+
T Consensus 112 gIav~nVLLPslIK~~Fpk~-~------------------~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WA 172 (395)
T COG2807 112 GIAVINVLLPSLIKRDFPKR-V------------------GLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWA 172 (395)
T ss_pred hHHHHHHhhhHHHHhhcccc-h------------------hhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHH
Confidence 99888888899999988754 4 7889999999999888887666555 37998887777
Q ss_pred hHH
Q psy12153 170 LPF 172 (236)
Q Consensus 170 ~~~ 172 (236)
.++
T Consensus 173 l~a 175 (395)
T COG2807 173 LLA 175 (395)
T ss_pred HHH
Confidence 777
No 155
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.84 E-value=1.6e-07 Score=82.06 Aligned_cols=132 Identities=10% Similarity=0.003 Sum_probs=102.1
Q ss_pred eeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhh
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQG 97 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 97 (236)
+|.|+ +..+.+...++..++..+..++.+++.||+|+|+.+..+.++.++........++.+.+++..++.|++.+.
T Consensus 233 ~~~g~---s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 309 (382)
T PRK11128 233 QAAGY---SASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTV 309 (382)
T ss_pred HHCCC---CHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 34455 777888888888888999999999999999999999999888888877777788888888889999999887
Q ss_pred hhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHH-HHHHHHHHHHHHHHHhcc---hhHHHHHHHHhHH
Q psy12153 98 LQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTE-ICWTVGLVMLSLVSYWFP---NWRDAELVTSLPF 172 (236)
Q Consensus 98 ~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~~ 172 (236)
..+....+..+. +++++ ++..+... ....+|..+++.+++.+. ++ ..++..+++.
T Consensus 310 ~~~~~~~~~~~~-~~~~~------------------~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~ 368 (382)
T PRK11128 310 CHLAAMRYIAAR-PGSEV------------------IRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVA 368 (382)
T ss_pred HHHHHHHHHHHC-CHhhh------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHH
Confidence 777777777776 45556 66666664 556677788888888775 33 3444444443
No 156
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.83 E-value=1.8e-07 Score=82.22 Aligned_cols=119 Identities=11% Similarity=-0.033 Sum_probs=91.7
Q ss_pred eeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHH
Q psy12153 19 LWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYN-----RSFPVYLILRTMQGF 93 (236)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~g~ 93 (236)
++++ +..+.++......++..++.++.++++||+|+|+.+.++.++..++....... .+.+.+.+..++.|+
T Consensus 245 ~~g~---~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~ 321 (406)
T PRK15402 245 GEQL---SSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAF 321 (406)
T ss_pred HhCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHH
Confidence 3555 77777888777888889999999999999999999988887776666655542 245556677788888
Q ss_pred hhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc
Q psy12153 94 FVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP 159 (236)
Q Consensus 94 ~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~ 159 (236)
+.+...+......... ++++| ++..+..+....+|..+++.+.+.+.
T Consensus 322 g~~~~~~~~~~~~~~~-~~~~~------------------g~~~~~~~~~~~~~~~~g~~~~~~l~ 368 (406)
T PRK15402 322 GIGLANAGLYRLTLFS-SDVSK------------------GTVSAAMGMLSMLIFTVGIELSKHAY 368 (406)
T ss_pred HHHHHhhhHHHHHhhh-ccccc------------------cHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 8877666555544433 34778 99999999999999999999888874
No 157
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.82 E-value=6e-08 Score=87.29 Aligned_cols=149 Identities=16% Similarity=-0.022 Sum_probs=103.8
Q ss_pred eeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhC-----chHHHHHHHHHHH-HHHHHHHHhccHHHH-HHHHHH
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFG-----RRVIMLISFYGQG-AISIAIVYNRSFPVY-LILRTM 90 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~G-----rr~~l~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~l 90 (236)
+++++ +..+.+...++..+...+-.+ +|.++||++ ||+.++++.++.. +.....+..++.... .+..++
T Consensus 54 ~~lg~---s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l 129 (468)
T TIGR00788 54 DDLGL---DGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIFL 129 (468)
T ss_pred HhcCC---CHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHH
Confidence 46788 999998999999999888655 999999998 7888888776663 433333333443333 346778
Q ss_pred HHHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHH
Q psy12153 91 QGFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELV 167 (236)
Q Consensus 91 ~g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i 167 (236)
.+++.+......-.+..|..+ +++ +.++...+.......+|.++++.+++.+. +|+..|++
T Consensus 130 ~~~~~a~~dv~~da~~~e~~~-~~~---------------~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~ 193 (468)
T TIGR00788 130 AALAKALYDVLVDSLYSERIR-ESP---------------SAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLI 193 (468)
T ss_pred HHHHHHHHHHhHHHHHhhhhh-cCC---------------CcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHH
Confidence 888887777888899999998 444 11122333333334577788777777653 79999988
Q ss_pred HHhHHHHHHHHHHhhcccch
Q psy12153 168 TSLPFVGFSLFYVWFIPESP 187 (236)
Q Consensus 168 ~~~~~~~~~~~~~~~~pet~ 187 (236)
.+...++. .+..+++||.+
T Consensus 194 ~a~l~ll~-~~~~~~~~E~~ 212 (468)
T TIGR00788 194 TAALLLLQ-LFVSNLSKERR 212 (468)
T ss_pred HHHHHHHH-HHHHHhccccc
Confidence 88887444 56667788863
No 158
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.81 E-value=6.3e-08 Score=86.19 Aligned_cols=143 Identities=15% Similarity=0.068 Sum_probs=90.1
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHH---HHHHHHHH--hccHHHHHHHHHHHHHhhhhhhH
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQG---AISIAIVY--NRSFPVYLILRTMQGFFVQGLQN 100 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~---~~~~~~~~--~~~~~~~~~~~~l~g~~~~~~~~ 100 (236)
+..+.++....+.++..++.+.+|+++||+|+++....+..... ++...... ..+.+......+..|.+..+...
T Consensus 285 s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 364 (438)
T TIGR00712 285 ALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVM 364 (438)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHH
Confidence 77778888889999999999999999999964432222222211 11111111 12333333333444443222222
Q ss_pred HHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHH-HHHHHHHHHhcc---hhHHHHHHHHhHHHHHH
Q psy12153 101 STYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVG-LVMLSLVSYWFP---NWRDAELVTSLPFVGFS 176 (236)
Q Consensus 101 ~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~l~~~i~~~~~---~w~~~~~i~~~~~~~~~ 176 (236)
.......|.+|++.| +...++.+....+| ..++|.+.+.+. +|...+++.....++..
T Consensus 365 ~~~~~~~~~~~~~~~------------------g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~ 426 (438)
T TIGR00712 365 LIGLHALELAPKKAA------------------GTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAV 426 (438)
T ss_pred HHHHHHHHhcChhhe------------------eeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHH
Confidence 223467789998889 99999887776665 467777777663 67888887777665666
Q ss_pred HHHHhhcccc
Q psy12153 177 LFYVWFIPES 186 (236)
Q Consensus 177 ~~~~~~~pet 186 (236)
+...+.+||.
T Consensus 427 ~~~~~~~~~~ 436 (438)
T TIGR00712 427 ILLIVVMIGE 436 (438)
T ss_pred HHHHHHHhhc
Confidence 6677777774
No 159
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.80 E-value=2.4e-07 Score=81.01 Aligned_cols=148 Identities=13% Similarity=-0.040 Sum_probs=92.0
Q ss_pred eeeeeeeecCcchhHHHH--HHHHHHHHhhhhhh-hhhhhhhCchHHHHHHHHHH-HHHHHHHH-H--hcc-HHHHHHHH
Q psy12153 17 VLLWHLYHHECKWNAAVV--TLYFLGVILGSIPA-GLLADRFGRRVIMLISFYGQ-GAISIAIV-Y--NRS-FPVYLILR 88 (236)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~-g~l~Dr~Grr~~l~~~~~~~-~~~~~~~~-~--~~~-~~~~~~~~ 88 (236)
.+|.++ +..+.|+.. .+..+...+.+++. ++.+||+|||+..++...+. .+...... . ..+ ...++...
T Consensus 28 l~~~g~---~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (390)
T TIGR02718 28 LREDGA---PLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAVGLL 104 (390)
T ss_pred HHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHH
Confidence 356677 889999873 56677787788777 55899999999876554332 21222222 1 112 22223333
Q ss_pred HHHHHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHH
Q psy12153 89 TMQGFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAE 165 (236)
Q Consensus 89 ~l~g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~ 165 (236)
++.++..+...+....+..|..+++++ +...+....+..+|.++++....++. +||..|
T Consensus 105 ~~~~~~~a~~d~~~d~~~~~~~~~~~~------------------~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f 166 (390)
T TIGR02718 105 ACASLASATQDIATDGMAAEHFNGRTL------------------AKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAF 166 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHhhh------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHH
Confidence 333344444444555566677766666 77777777777888888887665542 899999
Q ss_pred HHHHhHHHHHHHHHHhhccc
Q psy12153 166 LVTSLPFVGFSLFYVWFIPE 185 (236)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~pe 185 (236)
++.++..++..+...+..|+
T Consensus 167 ~~~a~l~~~~~~~~~~~~~~ 186 (390)
T TIGR02718 167 LLVACVPLASLVCVLWLKDR 186 (390)
T ss_pred HHHHHHHHHHHHHHHHcCCC
Confidence 99988874444444344344
No 160
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.79 E-value=3.4e-07 Score=80.11 Aligned_cols=134 Identities=10% Similarity=0.048 Sum_probs=95.5
Q ss_pred eeeeeeecCcchhHHHHHHHHH-HHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHH------hccHHHHHHHHHH
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFL-GVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVY------NRSFPVYLILRTM 90 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l 90 (236)
.|.++ +.++.+++.....+ ...++.++.|++.||+|+|+.+.++..+..+....... .++.........+
T Consensus 236 ~~~G~---s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (390)
T TIGR02718 236 VDAGW---PLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAF 312 (390)
T ss_pred HhcCC---CHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHH
Confidence 45566 88888988887764 66678899999999999999988876655333222221 1233333344455
Q ss_pred HHHhhhhhhHHHHHHHHhhcCc-cccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHH
Q psy12153 91 QGFFVQGLQNSTYTLLIELFPT-RWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAEL 166 (236)
Q Consensus 91 ~g~~~~~~~~~~~~~~~e~~~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~ 166 (236)
.+++.+...+.......+..++ +.+ +...+..+....+|..++|.+++.+. +++..|+
T Consensus 313 ~~~~~g~~~~~~~~~~~~~~~~~~~~------------------g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~ 374 (390)
T TIGR02718 313 GSLITGITSVAIYTAFMRFAGDGDQA------------------GTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFL 374 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcccch------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHH
Confidence 5566666767777777777665 677 89999999999999999999988875 5677777
Q ss_pred HHHhHH
Q psy12153 167 VTSLPF 172 (236)
Q Consensus 167 i~~~~~ 172 (236)
+.+++.
T Consensus 375 ~~~~~~ 380 (390)
T TIGR02718 375 SGTVLA 380 (390)
T ss_pred HHHHHH
Confidence 766655
No 161
>KOG2325|consensus
Probab=98.79 E-value=7.1e-08 Score=85.98 Aligned_cols=146 Identities=12% Similarity=0.157 Sum_probs=115.8
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhCc-hHHHHHHHHHHHHHHHHHH-H---hc-cHHHHHHHHHHHHHhhhhhh
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFGR-RVIMLISFYGQGAISIAIV-Y---NR-SFPVYLILRTMQGFFVQGLQ 99 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Gr-r~~l~~~~~~~~~~~~~~~-~---~~-~~~~~~~~~~l~g~~~~~~~ 99 (236)
+.+..|++.+...++.+++++.+|+-+.|.+. |+-++.+.++.++++++-. + .+ ..+.++++|++.|+|.+..
T Consensus 69 ~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~- 147 (488)
T KOG2325|consen 69 TATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNF- 147 (488)
T ss_pred CcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccH-
Confidence 56677999999999999999999999999984 5666778888888887663 2 23 5788899999999997654
Q ss_pred HHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc-----h-----------hHH
Q psy12153 100 NSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP-----N-----------WRD 163 (236)
Q Consensus 100 ~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~-----~-----------w~~ 163 (236)
...-.|+++-...++| .++.+....+..+|..+||.+...+. | +..
T Consensus 148 a~lR~Y~a~~s~~~dR------------------~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTa 209 (488)
T KOG2325|consen 148 AVLRAYIADASTVEDR------------------PRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTA 209 (488)
T ss_pred HHHHHHHHhccCccch------------------HHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecch
Confidence 5567899998888889 88899888888899999988887763 1 234
Q ss_pred HHHHHHhHHHHHHHHHHhhcccchhHH
Q psy12153 164 AELVTSLPFVGFSLFYVWFIPESPLWK 190 (236)
Q Consensus 164 ~~~i~~~~~~~~~~~~~~~~pet~~~~ 190 (236)
+-++.++..++..++..+++.|.++..
T Consensus 210 p~w~m~i~~i~~~v~i~~~f~E~~~~~ 236 (488)
T KOG2325|consen 210 PAWLMAILWIIYIVIILFFFKEVYRGI 236 (488)
T ss_pred HHHHHHHHHHHHHHHHHhheeecccCc
Confidence 556677777677777888888876543
No 162
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.78 E-value=2.1e-07 Score=76.73 Aligned_cols=149 Identities=17% Similarity=0.086 Sum_probs=108.2
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHh-------ccHHHHHHH
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYN-------RSFPVYLIL 87 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 87 (236)
.+.+.+|+ ++++...+.+.-.+|..+| ++.|.+.||+|++.++++|.+...++....... .+.+.+.+.
T Consensus 27 ~Lk~~l~~---sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~ 102 (250)
T PF06813_consen 27 QLKSRLGY---SQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLF 102 (250)
T ss_pred HHHHHhCC---CHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHH
Confidence 45567888 9999999999999999875 888999999999999999999999988877642 355667666
Q ss_pred HHHHHHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc--hhHHHH
Q psy12153 88 RTMQGFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP--NWRDAE 165 (236)
Q Consensus 88 ~~l~g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~--~w~~~~ 165 (236)
.++.|.+.+...........+.|| ++| |.+.++......+++.+-..+...+. +-...+
T Consensus 103 ~~l~~~s~~~~~ta~lvt~~~NFP-~~R------------------G~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fl 163 (250)
T PF06813_consen 103 LFLGGNSSCWFNTASLVTCVRNFP-RSR------------------GTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFL 163 (250)
T ss_pred HHHHcccHHHhhhHHHHHHHHhCc-ccc------------------CceehhhhHHHHhHHHHHHHHHHHHcCCChHHHH
Confidence 677666654444445555567777 468 99999999998888887666655543 333344
Q ss_pred HHHHhHHHHHHHHHHhhcccc
Q psy12153 166 LVTSLPFVGFSLFYVWFIPES 186 (236)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~pet 186 (236)
.+.++.+.++.+...+++...
T Consensus 164 l~la~~~~~v~l~~~~~vr~~ 184 (250)
T PF06813_consen 164 LFLAVLPAVVCLVAMFFVRPV 184 (250)
T ss_pred HHHHHHHHHHHHHHhhheecc
Confidence 455555545555555555443
No 163
>PRK09669 putative symporter YagG; Provisional
Probab=98.77 E-value=6.6e-07 Score=79.80 Aligned_cols=119 Identities=12% Similarity=0.118 Sum_probs=84.9
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHH--hccHHHHHHHHHHHHHhhhhhhHHHHHHH
Q psy12153 29 WNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVY--NRSFPVYLILRTMQGFFVQGLQNSTYTLL 106 (236)
Q Consensus 29 ~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~g~~~~~~~~~~~~~~ 106 (236)
..+.......+..+++.+++++++||+|+|+.+.++.++..+......+ .++.+.+.+..++.|++.+...+...+++
T Consensus 265 ~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ 344 (444)
T PRK09669 265 LATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMF 344 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555666777888899999999999999998887766654443333 34566667777889999999999999999
Q ss_pred HhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc
Q psy12153 107 IELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF 158 (236)
Q Consensus 107 ~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~ 158 (236)
+|..+.++.. .-.|..|...+..+....+|..+++.+++.+
T Consensus 345 ad~~d~~e~~-----------~G~r~~g~~~s~~~~~~klg~alg~~i~g~l 385 (444)
T PRK09669 345 SDVVDYEEKR-----------SGRRLDGLVFSTNLFAIKLGLAIGGAVVGWI 385 (444)
T ss_pred Hhhhhhhhhh-----------cCcCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998632210 0011116677888888888888888777665
No 164
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.77 E-value=9.3e-08 Score=83.17 Aligned_cols=141 Identities=20% Similarity=0.190 Sum_probs=106.6
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhh--CchHHH-HHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHHhhhhhhH
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRF--GRRVIM-LISFYGQGAISIAIVYNR--SFPVYLILRTMQGFFVQGLQN 100 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~--Grr~~l-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~g~~~~~~~~ 100 (236)
+....++..+++-++.+.|++++|+++||+ |||... ++.+++..++......++ |+....+..++.|+..-+..-
T Consensus 286 s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqm 365 (448)
T COG2271 286 SLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQM 365 (448)
T ss_pred CHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHH
Confidence 888999999999999999999999999997 776544 455555555555544555 447777778888888777666
Q ss_pred HHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHH-HHHHHHHHHHhcc---hhHHHHHHHHhHHHHHH
Q psy12153 101 STYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTV-GLVMLSLVSYWFP---NWRDAELVTSLPFVGFS 176 (236)
Q Consensus 101 ~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~l~~~i~~~~~---~w~~~~~i~~~~~~~~~ 176 (236)
.......|+.|++-- |.+.|+..++..+ |..++....+++. +|...|++..+.+++..
T Consensus 366 LiGl~a~e~~pK~Aa------------------GtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~ 427 (448)
T COG2271 366 LIGLAAAEFVPKKAA------------------GTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAI 427 (448)
T ss_pred HHHHHHhccccHhhc------------------cchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHH
Confidence 677788899998888 9999999888888 7777776666662 89888888877775554
Q ss_pred HHHHhhcc
Q psy12153 177 LFYVWFIP 184 (236)
Q Consensus 177 ~~~~~~~p 184 (236)
++......
T Consensus 428 lll~~~~~ 435 (448)
T COG2271 428 LLLLPVWN 435 (448)
T ss_pred HHHHHHHh
Confidence 44444433
No 165
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.76 E-value=1.2e-07 Score=84.86 Aligned_cols=120 Identities=12% Similarity=0.042 Sum_probs=100.1
Q ss_pred eeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHH----hccHHHHHHHHHHHHHhh
Q psy12153 20 WHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVY----NRSFPVYLILRTMQGFFV 95 (236)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~g~~~ 95 (236)
+++ +..+.++......++..++.++.|++.||+|||+.+.++..+.+++...... ..+.+.+....++.|++.
T Consensus 286 ~g~---s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~ 362 (485)
T TIGR00711 286 LGY---TALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGM 362 (485)
T ss_pred cCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHH
Confidence 455 8888899999999999999999999999999999999998888888777662 234555666678889988
Q ss_pred hhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcch
Q psy12153 96 QGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFPN 160 (236)
Q Consensus 96 ~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~~ 160 (236)
+...+.......+..|+++| +...++.+....+|..+++.+.+.+..
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~------------------g~~~~~~~~~~~~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 363 GCFFMPLTTIALSGLPPHKI------------------ARGSSLSNFTRQLGGSIGTALITTILT 409 (485)
T ss_pred HHHHHHHHHHHHhcCCHHHH------------------hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87777777777788888889 999999999999999999888777643
No 166
>PRK10054 putative transporter; Provisional
Probab=98.76 E-value=2.2e-07 Score=81.74 Aligned_cols=128 Identities=13% Similarity=-0.003 Sum_probs=95.2
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHhhhhhhHHHHH
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYN-RSFPVYLILRTMQGFFVQGLQNSTYT 104 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~g~~~~~~~~~~~~ 104 (236)
+....+++.....+......++.|.+.||+++|+.+..+..+..++....... ++.+.+.+...+.|++.+...+....
T Consensus 242 ~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~ 321 (395)
T PRK10054 242 AEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYM 321 (395)
T ss_pred HHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 44555667777766667777888999999999999998887777777666553 46666677788888888777788888
Q ss_pred HHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhHH
Q psy12153 105 LLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLPF 172 (236)
Q Consensus 105 ~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~~ 172 (236)
.+.+..|++.| +...+..+ ...+|..++|.+++.+. +....|++.+...
T Consensus 322 ~~~~~~p~~~~------------------~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~ 373 (395)
T PRK10054 322 LIDHIAPPGMK------------------ASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAI 373 (395)
T ss_pred HHHHhCCcccc------------------eehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHH
Confidence 99999999888 77766554 45578888888888775 3445555554444
No 167
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.75 E-value=3.4e-07 Score=79.98 Aligned_cols=133 Identities=14% Similarity=0.075 Sum_probs=91.2
Q ss_pred eeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHhhhhh
Q psy12153 20 WHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVY-NRSFPVYLILRTMQGFFVQGL 98 (236)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~g~~~~~~ 98 (236)
+|. +..+.++..+...++..++.++.+++.||+|+|+.+.++..+..++.++... .++.+...+..++.+.+....
T Consensus 230 ~g~---s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 306 (382)
T PRK10091 230 SGF---SETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFAL 306 (382)
T ss_pred cCC---CHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhh
Confidence 455 8888999999999999999999999999999999998888877777655543 444455555555555554444
Q ss_pred hHHHHH-HHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc----hhHHHHHHHHhHHH
Q psy12153 99 QNSTYT-LLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP----NWRDAELVTSLPFV 173 (236)
Q Consensus 99 ~~~~~~-~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~----~w~~~~~i~~~~~~ 173 (236)
.+.... ...+..+.+.+ +.. ..+....+|..++|.+++.+. +|+..+.+.++..+
T Consensus 307 ~~~~~~~~~~~~~~~~~~------------------~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~ 366 (382)
T PRK10091 307 SAPLQILLLQNAKGGELL------------------GAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSF 366 (382)
T ss_pred hHHHHHHHHHhCCcchHH------------------HHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHH
Confidence 433333 33343443333 433 235567788888888887653 57888887776663
Q ss_pred HH
Q psy12153 174 GF 175 (236)
Q Consensus 174 ~~ 175 (236)
+.
T Consensus 367 ~~ 368 (382)
T PRK10091 367 AA 368 (382)
T ss_pred HH
Confidence 33
No 168
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.75 E-value=6.3e-07 Score=77.56 Aligned_cols=115 Identities=12% Similarity=0.158 Sum_probs=86.0
Q ss_pred eeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHH
Q psy12153 19 LWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYN-----RSFPVYLILRTMQGF 93 (236)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~g~ 93 (236)
+++. +..+.+++.+...++..++.++.|++.||+|||+.+..+..+..++....... ++.........+.|+
T Consensus 236 ~~g~---~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 312 (385)
T TIGR00710 236 IMGV---SPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGI 312 (385)
T ss_pred HcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 4555 78888999999999999999999999999999999888877777666555442 223344555677788
Q ss_pred hhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHH-HHHHHHHHHHH
Q psy12153 94 FVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICW-TVGLVMLSLVS 155 (236)
Q Consensus 94 ~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~l~~~i~ 155 (236)
+.+...+.......|..| ++| +...+..+... .+|.+.++.++
T Consensus 313 ~~~~~~~~~~~~~~~~~~-~~~------------------g~~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 313 GNSMISSIAMAYALEDFP-HVA------------------GTASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred HHHHHHHHHHHHHhccCc-ccc------------------hHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888888888876 567 78888766554 45666666655
No 169
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.73 E-value=3.2e-07 Score=80.18 Aligned_cols=118 Identities=16% Similarity=-0.035 Sum_probs=78.9
Q ss_pred eeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhh
Q psy12153 19 LWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGL 98 (236)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 98 (236)
++++ +..+.+...+...++..++.++.+++.||+|||+.+.++..+..++.......++.+..+..-.+.+.+.+..
T Consensus 233 ~~g~---~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 309 (392)
T PRK10473 233 QMGF---SRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSVG 309 (392)
T ss_pred HcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555 7778888888999999999999999999999999999998888887777776655544444444444444333
Q ss_pred hHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc
Q psy12153 99 QNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF 158 (236)
Q Consensus 99 ~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~ 158 (236)
.+. ....+..|.++|. +.+.+...+...+|..+++.+...+
T Consensus 310 ~~~--~~~~~~~~~~~~~-----------------g~~~~~~~~~~~~g~~~~~~l~~~~ 350 (392)
T PRK10473 310 FGV--AMSQALGPFSLRA-----------------GVASSTLGIAQVCGSSLWIWLAAVL 350 (392)
T ss_pred hHH--HHHHHhccCcccc-----------------cHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 332 3344555655551 4455555555556666665555544
No 170
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.72 E-value=3.6e-07 Score=79.66 Aligned_cols=141 Identities=14% Similarity=0.135 Sum_probs=107.7
Q ss_pred ceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHh
Q psy12153 16 PVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNR-SFPVYLILRTMQGFF 94 (236)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~ 94 (236)
..+..++ +.+..+++..++.++..+|+..+|+++|| +.|+.+.....+..+......+.. +.+..++.-++.|+.
T Consensus 238 L~~v~g~---s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a 313 (394)
T COG2814 238 LESVAGF---SVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALALLFLWGFA 313 (394)
T ss_pred HHHccCC---CHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 3445566 89999999999999999999999999999 999998888777777777666544 455555666667777
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhH
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLP 171 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~ 171 (236)
............++ ..++.+ ....++....+++|..+|..+++.+. ++....++.++.
T Consensus 314 ~~~~~~~~~~~~a~-~~p~~~------------------~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l 374 (394)
T COG2814 314 FSPALQGLQTRLAR-LAPDAA------------------DLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAAL 374 (394)
T ss_pred hhhhhhHHHHHhcc-cCCCch------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHH
Confidence 66666666666666 435667 88899999999999999988888774 677778887777
Q ss_pred HHHHHHHHH
Q psy12153 172 FVGFSLFYV 180 (236)
Q Consensus 172 ~~~~~~~~~ 180 (236)
. +.++...
T Consensus 375 ~-~~a~~~~ 382 (394)
T COG2814 375 L-LLALLLA 382 (394)
T ss_pred H-HHHHHHH
Confidence 7 4433333
No 171
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.71 E-value=3.5e-07 Score=80.40 Aligned_cols=143 Identities=13% Similarity=0.168 Sum_probs=117.5
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhhHHHHHH
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQNSTYTL 105 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 105 (236)
+....|...++..+.-++...+..++.+|+|.|+.++++..+..+=..+.++.++.+.+.+.+.+.|+..+.......-|
T Consensus 257 g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkY 336 (412)
T PF01306_consen 257 GNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKY 336 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55667889999999999999999999999999999999999999988899999999999999999999999888889999
Q ss_pred HHhhcCccccccccchhhhhhccccccchhhHHH-HHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhHHHHHHHHHHh
Q psy12153 106 LIELFPTRWRIGVATYTLLIELFPTRWRIGVAWV-TEICWTVGLVMLSLVSYWFP---NWRDAELVTSLPFVGFSLFYVW 181 (236)
Q Consensus 106 ~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~~~~~~~~~~~ 181 (236)
+++.+|++.. ++...+ .++...+|..+.+.+++.+. |.+.+|++.+.+.+...++..+
T Consensus 337 I~~~fd~rls------------------At~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f 398 (412)
T PF01306_consen 337 ITAHFDKRLS------------------ATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAF 398 (412)
T ss_dssp HHHHS-GGGH------------------HHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCHhHH------------------HHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHhee
Confidence 9999998876 666665 46778888888888777774 6678888888887667777777
Q ss_pred hcccc
Q psy12153 182 FIPES 186 (236)
Q Consensus 182 ~~pet 186 (236)
.+++.
T Consensus 399 ~l~~~ 403 (412)
T PF01306_consen 399 TLKKD 403 (412)
T ss_dssp HS--S
T ss_pred eecCC
Confidence 77654
No 172
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.71 E-value=3.1e-07 Score=83.13 Aligned_cols=116 Identities=9% Similarity=0.025 Sum_probs=98.3
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHhhhhhhHHH
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYN---RSFPVYLILRTMQGFFVQGLQNST 102 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~g~~~~~~~~~~ 102 (236)
+..+.+.......++..++.++.|++.||+|||+.+..+.++.+++....... ++.+......++.|++.+...+..
T Consensus 293 s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~ 372 (495)
T PRK14995 293 SPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLAS 372 (495)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHH
Confidence 88899999999999999999999999999999999888888877776655432 345555667788899998888888
Q ss_pred HHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc
Q psy12153 103 YTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP 159 (236)
Q Consensus 103 ~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~ 159 (236)
.....+..|++++ +...+..+....+|..+|+.+.+.+.
T Consensus 373 ~~~~~~~~~~~~~------------------g~~~~~~~~~~~lG~~~G~ai~g~i~ 411 (495)
T PRK14995 373 TSAIMAAAPPEKA------------------AAAGAIETMAYELGAGLGIAIFGLLL 411 (495)
T ss_pred HHHHHhcCCHHhc------------------chHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888999989 99999999999999999988877764
No 173
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.70 E-value=2.8e-07 Score=82.97 Aligned_cols=147 Identities=10% Similarity=0.073 Sum_probs=99.8
Q ss_pred eeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhh----hhCc-hHHHHHHHHHHHHHHHHHHHhcc------HHHHHHH
Q psy12153 19 LWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLAD----RFGR-RVIMLISFYGQGAISIAIVYNRS------FPVYLIL 87 (236)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~D----r~Gr-r~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~ 87 (236)
..++ +....|.+..+..+.-++..++.|.++| |+|| |+.++++.+..+++..++...++ ...+++.
T Consensus 36 v~Gl---s~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~ 112 (473)
T PRK10429 36 VVGL---SVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVT 112 (473)
T ss_pred hcCC---CHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHH
Confidence 4567 8999999999999999999999999999 6698 66777788877777666654332 2233344
Q ss_pred HHHHHHhhhhhhHHHHHHHHhhc-CccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHh----cc---
Q psy12153 88 RTMQGFFVQGLQNSTYTLLIELF-PTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYW----FP--- 159 (236)
Q Consensus 88 ~~l~g~~~~~~~~~~~~~~~e~~-~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~----~~--- 159 (236)
..+.+++.........++..|+. ++++| .+..+.-....++|..+.+.+... +.
T Consensus 113 ~~l~~~~~t~~~ip~~al~~~lt~~~~eR------------------~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~ 174 (473)
T PRK10429 113 YILWGMTYTIMDIPFWSLVPTLTLDKRER------------------EQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGD 174 (473)
T ss_pred HHHHHHHHHHHcchHHhhhHHhCCCHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 45556666666666778889998 57788 777777666666665555443321 11
Q ss_pred ---hhHHHHHHHHhHHHHHHHHHHhhcccc
Q psy12153 160 ---NWRDAELVTSLPFVGFSLFYVWFIPES 186 (236)
Q Consensus 160 ---~w~~~~~i~~~~~~~~~~~~~~~~pet 186 (236)
+|+....+.+++.++..++..+..+|.
T Consensus 175 ~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~ 204 (473)
T PRK10429 175 RGFGFQMFTLVLIAFFIVSTIITLRNVHEV 204 (473)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHcCceec
Confidence 356566666666544455555556775
No 174
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.70 E-value=3e-08 Score=87.97 Aligned_cols=146 Identities=18% Similarity=0.158 Sum_probs=109.1
Q ss_pred eeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhh----hhCchH-HHHHHHHHHHHHHHHHHHh-c-c------HHHHH
Q psy12153 19 LWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLAD----RFGRRV-IMLISFYGQGAISIAIVYN-R-S------FPVYL 85 (236)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~D----r~Grr~-~l~~~~~~~~~~~~~~~~~-~-~------~~~~~ 85 (236)
..++ +....+.+..+..+..++..++.|.++| |+|||+ .++++.+..+++..++... + + ...+.
T Consensus 31 ~~gl---~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~ 107 (428)
T PF13347_consen 31 VLGL---SPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLF 107 (428)
T ss_pred HcCC---CHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHH
Confidence 3466 8888899999999999999999999999 899655 5567888888888877765 3 1 12234
Q ss_pred HHHHHHHHhhhhhhHHHHHHHHhhcC-ccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc----c-
Q psy12153 86 ILRTMQGFFVQGLQNSTYTLLIELFP-TRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF----P- 159 (236)
Q Consensus 86 ~~~~l~g~~~~~~~~~~~~~~~e~~~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~----~- 159 (236)
+..++..++.........++..|+.+ +++| .+..+.-..+..+|.++.+.+.+.+ .
T Consensus 108 ~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R------------------~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~ 169 (428)
T PF13347_consen 108 VFYILFDIAYTFVQIPYNALIPELTPDPDER------------------TRLSSWRMIFSMIGSLLASFLAPILVSWFGG 169 (428)
T ss_pred HHHHHHHHhhhhccCchhhcCccccccHhhh------------------hhHHHHHHHHHHHHHHHHHHHhhhhhhhhcc
Confidence 45555566666666677888999987 4567 8888888888888886555544433 2
Q ss_pred -----hhHHHHHHHHhHHHHHHHHHHhhccc
Q psy12153 160 -----NWRDAELVTSLPFVGFSLFYVWFIPE 185 (236)
Q Consensus 160 -----~w~~~~~i~~~~~~~~~~~~~~~~pe 185 (236)
+|++...+.+++.++..++..+..+|
T Consensus 170 ~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 170 GDTSNGYRWMALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred CccchHHHHHHHHHHHHHHHHhhhhhheeee
Confidence 58888888888886777777778888
No 175
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.70 E-value=2.6e-07 Score=91.57 Aligned_cols=145 Identities=12% Similarity=0.025 Sum_probs=107.7
Q ss_pred eeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHh--------------------
Q psy12153 19 LWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYN-------------------- 78 (236)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~-------------------- 78 (236)
.++. +....+++.+.+.++.+++.++.|+++||.++++.+..+.++.++..+...+.
T Consensus 255 ~~g~---~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 331 (1140)
T PRK06814 255 TLGG---DENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSK 331 (1140)
T ss_pred HcCC---chHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcc
Confidence 3555 78889999999999999999999999998887776666655555544444332
Q ss_pred ccHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc
Q psy12153 79 RSFPVYLILRTMQGFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF 158 (236)
Q Consensus 79 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~ 158 (236)
++.+.+++..++.|++.+...+...+++.+..|++.| |+.++..+....+|..+++.+.+.+
T Consensus 332 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~------------------G~v~g~~~~~~~~~~~ig~~~~g~l 393 (1140)
T PRK06814 332 RHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHR------------------ARVIAANNVLNAAFMVAGTIILALL 393 (1140)
T ss_pred cccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccc------------------eeeeHHHHHHHHHHHHHHHHHHHHH
Confidence 5666677778888998888888889999999999999 9999999999999888888877766
Q ss_pred c----hhHHHHHHHHhHHHHHHHHHHhhcc
Q psy12153 159 P----NWRDAELVTSLPFVGFSLFYVWFIP 184 (236)
Q Consensus 159 ~----~w~~~~~i~~~~~~~~~~~~~~~~p 184 (236)
. ++...+++.++..++..++.....|
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (1140)
T PRK06814 394 QALGFSIPWIILFIALANLIVAILILRLLP 423 (1140)
T ss_pred HHhccCHHHHHHHHHHHHHHHHHHHHHHCh
Confidence 3 3455555444443333333333333
No 176
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.67 E-value=1.4e-06 Score=76.61 Aligned_cols=133 Identities=5% Similarity=-0.057 Sum_probs=94.6
Q ss_pred eeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhh
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQG 97 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 97 (236)
+++|+ +..+.+.....+.++..++.++.+++.||.+|+..+....+.......+....++.+.+.+..++.|++.+.
T Consensus 245 ~~~g~---s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~~ 321 (394)
T PRK10213 245 NLAGF---GVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFAL 321 (394)
T ss_pred HhcCC---ChhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHh
Confidence 34566 778889999999999999999999999996544333333333333344444555666777778888988888
Q ss_pred hhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhHH
Q psy12153 98 LQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLPF 172 (236)
Q Consensus 98 ~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~~ 172 (236)
..+....++.+..| +++ ++..+.......+|..+|+.+++.+. +++..++..++..
T Consensus 322 ~~~~~~~~~~~~~~-~~~------------------~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~ 380 (394)
T PRK10213 322 VPVGWSTWITRSLA-DQA------------------EKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLM 380 (394)
T ss_pred hhHHHHHHHHHHCc-ccH------------------HHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHH
Confidence 88877878888877 445 55666667777888888888888774 5666666655544
No 177
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.67 E-value=1.2e-06 Score=77.09 Aligned_cols=137 Identities=14% Similarity=0.035 Sum_probs=84.4
Q ss_pred eeeeeeecCcchhHHHHHHHH-HHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHH---HHh-ccHHHHHHHHH---
Q psy12153 18 LLWHLYHHECKWNAAVVTLYF-LGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAI---VYN-RSFPVYLILRT--- 89 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~--- 89 (236)
+++|+ +..+.+++..... ++..++.++++++.||+|||+.+.++..+..+..... +.. ++.+.+.+.-.
T Consensus 238 ~~~G~---~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 314 (402)
T PRK11902 238 RGAGF---SAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIEN 314 (402)
T ss_pred HhcCC---CHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Confidence 34666 7888888876554 4678999999999999999998877776655554333 233 34454444443
Q ss_pred -HHHHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHH
Q psy12153 90 -MQGFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAE 165 (236)
Q Consensus 90 -l~g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~ 165 (236)
..|++.+...+....++.+.+|.+.+ +...+ ...+|..+++.+++.+. ||+..|
T Consensus 315 ~~~g~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~----~~~l~~~~~~~~~G~l~~~~G~~~~f 372 (402)
T PRK11902 315 LCGGMGTAAFVALLMALCNRSFSATQY------------------ALLSA----LASVGRVYVGPTSGYLVEAYGWPGFY 372 (402)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcHHHH------------------HHHHH----HHHHHHHHHHHHHHHHHHHhChHHHH
Confidence 34444555566666666666665544 43333 33444443444444432 788888
Q ss_pred HHHHhHHHHHHHHHH
Q psy12153 166 LVTSLPFVGFSLFYV 180 (236)
Q Consensus 166 ~i~~~~~~~~~~~~~ 180 (236)
.+.++++ +..++..
T Consensus 373 ~~~~~~~-~~~~~~~ 386 (402)
T PRK11902 373 LMTVVIA-LPGLALL 386 (402)
T ss_pred HHHHHHH-HHHHHHH
Confidence 8877777 3333333
No 178
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.66 E-value=9e-07 Score=75.47 Aligned_cols=125 Identities=10% Similarity=0.078 Sum_probs=94.5
Q ss_pred eeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhh
Q psy12153 20 WHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQ 99 (236)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~ 99 (236)
+++ +..+.++..+.+..+.++|.+..+++.||+|+|+++.++..+..+...+....++... ...-.+.|++.+..+
T Consensus 173 ~g~---s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~-~~~~~l~g~~~s~i~ 248 (310)
T TIGR01272 173 LGL---PEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVA-MWFVLALGLFNSIMF 248 (310)
T ss_pred CCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHHHHHH
Confidence 466 8889999999999999999999999999999999988888877777665555444332 345557889999999
Q ss_pred HHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHH
Q psy12153 100 NSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVT 168 (236)
Q Consensus 100 ~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~ 168 (236)
|...+...+..|++. +...++. ....+|..+.|.+.+.+. +.+..+++.
T Consensus 249 P~~~s~a~~~~~~~~-------------------~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~ 300 (310)
T TIGR01272 249 PTIFSLALNALGRHT-------------------SQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALP 300 (310)
T ss_pred HHHHHHHHhhhhhhh-------------------hhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHH
Confidence 999988888887653 3334444 456688888888777663 456666533
No 179
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.66 E-value=2.6e-07 Score=79.63 Aligned_cols=105 Identities=13% Similarity=0.048 Sum_probs=83.9
Q ss_pred eeeeeecCcchhHHHHHHHH-HHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHh-----------ccHHHHHH
Q psy12153 19 LWHLYHHECKWNAAVVTLYF-LGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYN-----------RSFPVYLI 86 (236)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~-----------~~~~~~~~ 86 (236)
++++ +..+.+.+.++.. ++..++.+++|++.||+|||+.+.++.++.++......+. ++.+.+..
T Consensus 238 ~~g~---~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (356)
T TIGR00901 238 DMGF---SKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFL 314 (356)
T ss_pred HcCC---CHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHH
Confidence 3555 7788887777655 5778999999999999999999888888877766654432 34456667
Q ss_pred HHHHHHHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHH
Q psy12153 87 LRTMQGFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICW 144 (236)
Q Consensus 87 ~~~l~g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (236)
..++.+++.+...+...+++.|.+|+++| ++..++.+...
T Consensus 315 ~~~l~~~~~~~~~~~~~~~~~~~~p~~~~------------------g~~~g~~~~~~ 354 (356)
T TIGR00901 315 TITLEAVTGGLGTVAFVAFLSKLSNPKFG------------------ATQMALLSSLS 354 (356)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHhcCCCcc------------------HHHHHHHHHHH
Confidence 77888999889999999999999999999 88888877654
No 180
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.66 E-value=6.5e-07 Score=78.69 Aligned_cols=119 Identities=10% Similarity=-0.023 Sum_probs=92.6
Q ss_pred eeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhh
Q psy12153 19 LWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGL 98 (236)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 98 (236)
.+|. +..+.++..+...++..++++..+++.||.++|+++..+. +.++........++.+...+..++.|++.+..
T Consensus 235 ~lg~---s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~ 310 (393)
T PRK11195 235 ALGI---TLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGI-LMGLVVLLMALQHSLLPAYPLLILIGALGGFF 310 (393)
T ss_pred HcCC---ChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHH-HHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhh
Confidence 3555 8888999999999999999999999999999988877775 33444444455566666666777888887777
Q ss_pred hHHHHHHHHhhcCccc-cccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc
Q psy12153 99 QNSTYTLLIELFPTRW-RIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP 159 (236)
Q Consensus 99 ~~~~~~~~~e~~~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~ 159 (236)
.+...+.+.+..|++. + |+..+..+....+|..++..+...+.
T Consensus 311 ~~~~~~~~q~~~~~~~~~------------------g~~~a~~~~~~~~~~~~~~~~~~~~~ 354 (393)
T PRK11195 311 VVPMNALLQHRGHVLVGA------------------GHSIAVQNFNENLAMLLMLGLYSLLV 354 (393)
T ss_pred hhhHHHHHHhhCcccccc------------------hhHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 7767777888766654 6 88899999999999988888777663
No 181
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.65 E-value=1.7e-06 Score=74.89 Aligned_cols=118 Identities=13% Similarity=0.081 Sum_probs=77.5
Q ss_pred eeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHH---Hh-ccHHHHHHHHHHHHHh
Q psy12153 19 LWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIV---YN-RSFPVYLILRTMQGFF 94 (236)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~l~g~~ 94 (236)
++++ +..+.++......++..++.++.+++.||+|||+.+.++..+..+...... .. .+.+...+...+.+.+
T Consensus 224 ~~g~---s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (377)
T PRK11102 224 LNGV---SPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGC 300 (377)
T ss_pred HhCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 3455 788889999999999999999999999999999998888765544333222 11 2333333343344444
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHH-HHHHHHHHHHHHHHhc
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEI-CWTVGLVMLSLVSYWF 158 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~l~~~i~~~~ 158 (236)
.+...+....++.|..| +.+ +...+.... ...+|..+++.++...
T Consensus 301 ~~~~~~~~~~~~~~~~~-~~~------------------g~~~~~~~~~~~~~g~~~g~~~~~~~ 346 (377)
T PRK11102 301 VSMISSNAMAVILDEFP-HMA------------------GTASSLAGTLRFGIGAIVGALLSLAP 346 (377)
T ss_pred HHHhhHHHHHHHhcccc-ccc------------------hHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 44444455556667665 567 777776543 3556777777665443
No 182
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.64 E-value=1.7e-06 Score=70.88 Aligned_cols=127 Identities=28% Similarity=0.404 Sum_probs=99.8
Q ss_pred chhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhcc--HHHHHHHHHHHHHhhhhhhHHHHHH
Q psy12153 28 KWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRS--FPVYLILRTMQGFFVQGLQNSTYTL 105 (236)
Q Consensus 28 ~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~g~~~~~~~~~~~~~ 105 (236)
...++..+.+.++..++.++.|.++||+|||+.++.+.....++.....+..+ .+.+.+.|...|++.+...+....+
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 118 (338)
T COG0477 39 LLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASAL 118 (338)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 46789999999999999999999999999998888877665555566666655 7888899999999998888999999
Q ss_pred HHhhcCc-cccccccchhhhhhccccccchhhHHHHHH-HHHHHHHHHHHHHHhcc-----hhHHHHHHHHhHH
Q psy12153 106 LIELFPT-RWRIGVATYTLLIELFPTRWRIGVAWVTEI-CWTVGLVMLSLVSYWFP-----NWRDAELVTSLPF 172 (236)
Q Consensus 106 ~~e~~~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~l~~~i~~~~~-----~w~~~~~i~~~~~ 172 (236)
+.|..|. +.| +...+.... ...+|..+++.++..+. +|+..+.+.....
T Consensus 119 ~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (338)
T COG0477 119 LSEWFPEATER------------------GLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLG 174 (338)
T ss_pred HHHhcCchhHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 9999987 566 777777666 57777777776655543 6887665555544
No 183
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.63 E-value=3e-07 Score=81.35 Aligned_cols=128 Identities=10% Similarity=-0.038 Sum_probs=82.7
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHH-HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhhHHHHH
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVI-MLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQNSTYT 104 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~ 104 (236)
+..+.+.......++..++.+.+|+++||++||+. .....++..++..+.....+.......-.+.+++.....+....
T Consensus 277 s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 356 (412)
T TIGR02332 277 SNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWT 356 (412)
T ss_pred cHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHh
Confidence 56777888899999999999999999999997764 33333333333322222222222222222222222222333344
Q ss_pred HHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc----hhHHHHHHHHhH
Q psy12153 105 LLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP----NWRDAELVTSLP 171 (236)
Q Consensus 105 ~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~----~w~~~~~i~~~~ 171 (236)
...|.+|++.| +.+.++.+....+|..++|.+.+.+. +|++.+.+.++.
T Consensus 357 ~~~~~~~~~~~------------------~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 357 TPDQSISLQAR------------------AIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred hcccccchHHH------------------HHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHH
Confidence 45567777777 99999999999999999998877663 488777765543
No 184
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.63 E-value=1.1e-06 Score=77.44 Aligned_cols=116 Identities=10% Similarity=-0.048 Sum_probs=90.7
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhh-hhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhhHHHHH
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLAD-RFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQNSTYT 104 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~D-r~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~ 104 (236)
+..+.++..+...++...+..+.+++.| |++.++.+..+..+.+++....+..++.+.+.+...+.+++.+...+....
T Consensus 241 ~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~~ 320 (400)
T PRK11646 241 SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPARET 320 (400)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccHHH
Confidence 4566777777776666655555566655 577677777777777777777777777777777777788887777788889
Q ss_pred HHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc
Q psy12153 105 LLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP 159 (236)
Q Consensus 105 ~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~ 159 (236)
++.+..|+++| ++..+..+....+|..++|.+.+.+.
T Consensus 321 ~~~~~~p~~~~------------------g~~~g~~~~~~~~g~~ig~~l~G~l~ 357 (400)
T PRK11646 321 LSASLADARAR------------------GSYMGFSRLGLALGGAIGYIGGGWLF 357 (400)
T ss_pred HHHhcCCcccc------------------hhhhhHHHHHHHHHHHhcccchHHHH
Confidence 99999999999 99999999999999999998888874
No 185
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.61 E-value=2.6e-06 Score=75.21 Aligned_cols=143 Identities=14% Similarity=0.213 Sum_probs=107.9
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHh-ccHHHHHH----HHHHHHHhhhhhhH
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYN-RSFPVYLI----LRTMQGFFVQGLQN 100 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~l~g~~~~~~~~ 100 (236)
+....+...++..+.-++.-...+++..|+|-|++++++.+..++=..+.+.. ++.+...+ ...+.|+..+..+.
T Consensus 241 ~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~ 320 (400)
T PF03825_consen 241 SGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHA 320 (400)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHH
Confidence 34455666667777778888889999999999999999999888877777766 45444333 34568999999999
Q ss_pred HHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHH-HHHHHHHHHHHHHHhcc---------hhHHHHHHHHh
Q psy12153 101 STYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEI-CWTVGLVMLSLVSYWFP---------NWRDAELVTSL 170 (236)
Q Consensus 101 ~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~l~~~i~~~~~---------~w~~~~~i~~~ 170 (236)
....++.+..|++.| ++..++++. ...+|..+|..+++++. .|...+.+.++
T Consensus 321 a~~~yi~~~~p~~~~------------------at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~ 382 (400)
T PF03825_consen 321 ASVRYIDRIAPPELR------------------ATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAV 382 (400)
T ss_pred HHHHHHHHhCCccch------------------HHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHH
Confidence 999999999999999 899998765 56789999998888874 24455666666
Q ss_pred HHHHHHHHHHhhcccc
Q psy12153 171 PFVGFSLFYVWFIPES 186 (236)
Q Consensus 171 ~~~~~~~~~~~~~pet 186 (236)
+.++..++..++.+|+
T Consensus 383 ~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 383 MALVILVLFVILFKPK 398 (400)
T ss_pred HHHHHHHHHHhhccCC
Confidence 6655555555566654
No 186
>PRK10133 L-fucose transporter; Provisional
Probab=98.60 E-value=1.4e-06 Score=77.71 Aligned_cols=130 Identities=15% Similarity=0.126 Sum_probs=94.0
Q ss_pred eeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhh
Q psy12153 19 LWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGL 98 (236)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 98 (236)
++|+ +..+.++....+.++..++.++.+++.||+|||+++..+.++..+...+..+.++.. .+..-.+.|++.+..
T Consensus 289 ~~g~---s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~glg~~~i 364 (438)
T PRK10133 289 IPGM---TAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCSAFMSIQ 364 (438)
T ss_pred cCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHHH
Confidence 4566 899999999999999999999999999999999999888777766666555555432 244567789999999
Q ss_pred hHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---h-hHHHHHHHHhHH
Q psy12153 99 QNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---N-WRDAELVTSLPF 172 (236)
Q Consensus 99 ~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~-w~~~~~i~~~~~ 172 (236)
+|.......+..+++ . +...++... ..+|..++|.+.+.+. + -+..|++..+..
T Consensus 365 ~P~~~s~a~~~~~~~-~------------------~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~ 422 (438)
T PRK10133 365 YPTIFSLGIKNLGQD-T------------------KYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCF 422 (438)
T ss_pred HHHHHHHHHcccchh-h------------------ccchhHHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence 999999999988764 3 344444443 3355666666555542 3 456665544433
No 187
>KOG2504|consensus
Probab=98.60 E-value=4.2e-07 Score=82.52 Aligned_cols=145 Identities=18% Similarity=0.230 Sum_probs=124.6
Q ss_pred eeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhC--chHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFG--RRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFV 95 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~G--rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~ 95 (236)
...++ +..+...+.++..+...++.+..|+++|+.. ++.+..++.++.++.....+..+++..++..-.+.|++.
T Consensus 326 ~~~g~---~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~ 402 (509)
T KOG2504|consen 326 KSLGL---SSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCV 402 (509)
T ss_pred hhcCC---ChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 35566 8899999999999999999999999999987 556677888888888888899999999999999999999
Q ss_pred hhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc----hhHHHHHHHHhH
Q psy12153 96 QGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP----NWRDAELVTSLP 171 (236)
Q Consensus 96 ~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~----~w~~~~~i~~~~ 171 (236)
|........++.|....++- ..+.++..+...++.+++|.+++.+. +|...|+..++.
T Consensus 403 g~~~~l~~~i~~~~~g~~~l------------------~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~ 464 (509)
T KOG2504|consen 403 GSFSSLTPVILVDLVGLEKL------------------SNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLC 464 (509)
T ss_pred HHHHHHHHHHHHHHcChhhc------------------chHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChH
Confidence 88888888899999998888 89999999999999999999998774 588888888887
Q ss_pred HHHHHHHHHhhcc
Q psy12153 172 FVGFSLFYVWFIP 184 (236)
Q Consensus 172 ~~~~~~~~~~~~p 184 (236)
. ++....++..|
T Consensus 465 ~-~~s~~~~~~~~ 476 (509)
T KOG2504|consen 465 F-LLSAVLLLILR 476 (509)
T ss_pred H-HHHHHHHHHhH
Confidence 7 55555555555
No 188
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.59 E-value=4.1e-07 Score=77.53 Aligned_cols=114 Identities=21% Similarity=0.225 Sum_probs=94.7
Q ss_pred eeeeeeecC-cchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHH---hccHHHHHHHHHHHHH
Q psy12153 18 LLWHLYHHE-CKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVY---NRSFPVYLILRTMQGF 93 (236)
Q Consensus 18 ~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~g~ 93 (236)
+++++ + ..+.+...++..++..++.++.|+++||+|+|+...+......+....... .++........++.|+
T Consensus 235 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 311 (352)
T PF07690_consen 235 EVLGF---SGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGF 311 (352)
T ss_dssp HHHHC---CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHH
T ss_pred hccCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 45566 6 678888899999999999999999999999988877777666666665544 3345666667788899
Q ss_pred hhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHH
Q psy12153 94 FVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLS 152 (236)
Q Consensus 94 ~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 152 (236)
+.+...+....++.|..|+++| ++..++.+....+|..++|
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~------------------g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 312 GFGIVFPILFSLIQELVPPEYR------------------GTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHCHHHHHHHHCCCHTCHH------------------HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHH------------------HHHHHHHHHHHHHHHHHCC
Confidence 9888899999999999999999 9999999999999999886
No 189
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.58 E-value=3.9e-06 Score=74.79 Aligned_cols=121 Identities=12% Similarity=0.150 Sum_probs=92.4
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHHhhhhhhHHHH
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNR--SFPVYLILRTMQGFFVQGLQNSTY 103 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~g~~~~~~~~~~~ 103 (236)
++....+.......+.+++.+++..+++|+|+|+++.++.++.+++..+..+.+ +....++..++.+++.+...+..+
T Consensus 270 ~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~w 349 (467)
T COG2211 270 PELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPW 349 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccH
Confidence 444555666667777777799999999999999999999999999999888765 677777888999999999999999
Q ss_pred HHHHhhcCccc-cccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc
Q psy12153 104 TLLIELFPTRW-RIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF 158 (236)
Q Consensus 104 ~~~~e~~~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~ 158 (236)
++++|..+-.+ +. -.|.-|...+......-+|..++..+.++.
T Consensus 350 am~~d~vDyge~~T------------G~R~eGi~~s~~tF~~K~g~ala~~~~g~~ 393 (467)
T COG2211 350 AMVADTVDYGEWKT------------GVRREGIVYSGMTFFRKLGLALAGFIPGWI 393 (467)
T ss_pred HHhcchhhHHHHHh------------CCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998875322 10 011117777777777777777777666554
No 190
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.56 E-value=1.2e-06 Score=75.55 Aligned_cols=119 Identities=11% Similarity=-0.030 Sum_probs=88.5
Q ss_pred eeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhh
Q psy12153 19 LWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRF-GRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQG 97 (236)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~-Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 97 (236)
+.+. +..+.+...+...++.+++.+..|+++||+ +||+.+.++..+.+++.....+.++..... ...+.|++.+.
T Consensus 226 ~~g~---~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~~~g~ 301 (355)
T TIGR00896 226 SHGA---SAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVLGLGQGG 301 (355)
T ss_pred HcCC---CHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHHHHhhhh
Confidence 4455 788889999999999999999999999999 567777777777777766666554433222 34677888888
Q ss_pred hhHHHHHHHHhhcC-ccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc
Q psy12153 98 LQNSTYTLLIELFP-TRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP 159 (236)
Q Consensus 98 ~~~~~~~~~~e~~~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~ 159 (236)
.++.....+.+..+ ++++ +...++.+....+|..++|.+.+.+.
T Consensus 302 ~~~~~~~~~~~~~~~~~~~------------------g~~~~~~~~~~~~~~~~gp~~~G~l~ 346 (355)
T TIGR00896 302 AFPLALTLIGLRSRQAAQA------------------AALSAMAQSIGYLLAALGPLFVGVLH 346 (355)
T ss_pred HhHHHHHHHHHhccCHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88877777665554 4455 77777777777788888888777664
No 191
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.56 E-value=4.5e-07 Score=77.86 Aligned_cols=116 Identities=22% Similarity=0.159 Sum_probs=81.1
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhC-chHHHH-HHHHH-HHHHHHHHHH--hccHHHHHHHHHHHHHhhhhhhH
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFG-RRVIML-ISFYG-QGAISIAIVY--NRSFPVYLILRTMQGFFVQGLQN 100 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~G-rr~~l~-~~~~~-~~~~~~~~~~--~~~~~~~~~~~~l~g~~~~~~~~ 100 (236)
+..+.++..+...++..++.++.++++||.+ ||+..+ ..... ..+....... ..+.....+..++.|+......+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 329 (379)
T TIGR00881 250 SKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQM 329 (379)
T ss_pred CHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhH
Confidence 7788899999999999999999999999863 333222 22211 1222222222 22344444555666665555555
Q ss_pred HHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc
Q psy12153 101 STYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP 159 (236)
Q Consensus 101 ~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~ 159 (236)
....+..|..|++.| +...++.+....+|..++|.+.+.+.
T Consensus 330 ~~~~~~~~~~~~~~~------------------g~~~g~~~~~~~~g~~~~~~~~g~l~ 370 (379)
T TIGR00881 330 LIGVIASELAPKKAA------------------GTAAGFVGFFAYLGGILAGLPLGYLA 370 (379)
T ss_pred HHHHHHHHhcCcchh------------------HHHHHHHHHhhhhhhhhhhhhHHHHH
Confidence 566788999999999 99999999999999999998887764
No 192
>PRK11462 putative transporter; Provisional
Probab=98.56 E-value=8.5e-06 Score=73.26 Aligned_cols=115 Identities=17% Similarity=0.139 Sum_probs=72.6
Q ss_pred chhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhcc--HHHHHHHHHHHHHhhhhhhHHHHHH
Q psy12153 28 KWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRS--FPVYLILRTMQGFFVQGLQNSTYTL 105 (236)
Q Consensus 28 ~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~g~~~~~~~~~~~~~ 105 (236)
...+.+.+.+.++.+++.+++++++||+|+|+.+.++..+..+..++..+.++ ...+.+.-++.|++.+...+....+
T Consensus 263 ~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m 342 (460)
T PRK11462 263 EVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVM 342 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456677788888999999999999999999877655544443333333222 2234444566677766666666778
Q ss_pred HHhhcCcc-----ccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc
Q psy12153 106 LIELFPTR-----WRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF 158 (236)
Q Consensus 106 ~~e~~~~~-----~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~ 158 (236)
++|..+.+ +|.. |...+.......+|..+++.+.+.+
T Consensus 343 ~ad~~d~~e~~tG~r~~----------------g~~~a~~~f~~Klg~alg~~i~g~i 384 (460)
T PRK11462 343 MSDTVDYGEWCNGKRLT----------------GISFAGTLFVLKLGLAFGGALIGWM 384 (460)
T ss_pred HHHhHhhhHHhcCCCch----------------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88877632 2311 4445555566666666666555543
No 193
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.56 E-value=2.9e-06 Score=77.07 Aligned_cols=138 Identities=9% Similarity=0.027 Sum_probs=102.9
Q ss_pred hHHHHHHHHHHHHhhhhhh----hhhhhhhCchHHHHHHHHHHHHHHHHHHHhcc---------HHHHHHHHHHHHHhhh
Q psy12153 30 NAAVVTLYFLGVILGSIPA----GLLADRFGRRVIMLISFYGQGAISIAIVYNRS---------FPVYLILRTMQGFFVQ 96 (236)
Q Consensus 30 ~~~~~~~~~l~~~~~~~~~----g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~g~~~~ 96 (236)
.+++.++..+...+..++. +++.+|++....+.++.++.+++........+ .+.++...++.|++..
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~ 397 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGEL 397 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHH
Confidence 4556666665555665555 56666666667888899999998888766543 4577888999999999
Q ss_pred hhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc-------------hhHH
Q psy12153 97 GLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP-------------NWRD 163 (236)
Q Consensus 97 ~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~-------------~w~~ 163 (236)
...|....++.+..|++.| ++.++...+...+|..++..+..... +..+
T Consensus 398 ~~~p~g~s~~~~~aP~~~r------------------g~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 459 (500)
T PRK09584 398 MISGLGLAMVAQLVPQRLM------------------GFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGR 459 (500)
T ss_pred HHhHHHHHHHHHhCcHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHH
Confidence 9999999999999999999 99999999888889888877764221 2567
Q ss_pred HHHHHHhHHHHHHHHHHhhccc
Q psy12153 164 AELVTSLPFVGFSLFYVWFIPE 185 (236)
Q Consensus 164 ~~~i~~~~~~~~~~~~~~~~pe 185 (236)
.|...++..++.+++..+..|.
T Consensus 460 ~f~~~~~~~~~~a~~~~~~~~~ 481 (500)
T PRK09584 460 VFLQIGIATAVIAVLMLLTAPK 481 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777664455555444443
No 194
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.54 E-value=1.4e-06 Score=77.36 Aligned_cols=120 Identities=16% Similarity=0.153 Sum_probs=99.5
Q ss_pred chhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHHhhhhhhHHHHHH
Q psy12153 28 KWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNR--SFPVYLILRTMQGFFVQGLQNSTYTL 105 (236)
Q Consensus 28 ~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~g~~~~~~~~~~~~~ 105 (236)
...+....+..++..++.+++++++||+|+|+++..+..+.+++..+..+.+ +.+.+++...+.|++.+.......++
T Consensus 260 ~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~ 339 (428)
T PF13347_consen 260 GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAM 339 (428)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccc
Confidence 5667778889999999999999999999999999999999999998888765 88899999999999999999999999
Q ss_pred HHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc
Q psy12153 106 LIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF 158 (236)
Q Consensus 106 ~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~ 158 (236)
++|..+.++.. ...|..|...+...+...+|..+++.+.+.+
T Consensus 340 ~ad~id~~e~~-----------tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~ 381 (428)
T PF13347_consen 340 LADVIDYDEWK-----------TGRRREGMYFSVNSFFIKIGQGLAGAIVGLL 381 (428)
T ss_pred cccchhhHHHh-----------cCCCchHHHHHhhhhhhHHHHHHHHHHHHHH
Confidence 99999754320 0011128888888888888888888776655
No 195
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.54 E-value=2.7e-06 Score=74.24 Aligned_cols=134 Identities=13% Similarity=0.104 Sum_probs=84.9
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhCch---HHHH-HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhhHHHHHH
Q psy12153 30 NAAVVTLYFLGVILGSIPAGLLADRFGRR---VIML-ISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQNSTYTL 105 (236)
Q Consensus 30 ~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr---~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 105 (236)
.+....+..+...++ .++++||..|| +... ...++.++.........+....++.-.+.+++....++..+.+
T Consensus 228 ~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 304 (368)
T TIGR00903 228 AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDW 304 (368)
T ss_pred HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHH
Confidence 344444444444444 57888887653 3322 2333334444444444444444444455666666666777889
Q ss_pred HHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc-hhHHHHHHHHhHHHHHHHHHHhhcc
Q psy12153 106 LIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP-NWRDAELVTSLPFVGFSLFYVWFIP 184 (236)
Q Consensus 106 ~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~-~w~~~~~i~~~~~~~~~~~~~~~~p 184 (236)
.+|.+|++.| ++..++.+....+|+.++|.+.+.+. +-+..|.+.+++.++..+.. +.++
T Consensus 305 ~~~~~p~~~r------------------gt~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~~~~-~~~~ 365 (368)
T TIGR00903 305 IGKFCDKELH------------------GKAAGAIGFTSRAISVALALAAMLFISSAEAYFTFLAILITIAFAIA-LLLP 365 (368)
T ss_pred HHHhcchhhc------------------CcccchhhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH-HhCC
Confidence 9999999999 99999999999999988888776554 66677777777764443333 3434
Q ss_pred c
Q psy12153 185 E 185 (236)
Q Consensus 185 e 185 (236)
+
T Consensus 366 ~ 366 (368)
T TIGR00903 366 N 366 (368)
T ss_pred C
Confidence 4
No 196
>KOG2816|consensus
Probab=98.52 E-value=1e-06 Score=78.99 Aligned_cols=130 Identities=18% Similarity=0.298 Sum_probs=102.1
Q ss_pred HHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh--hhhhhHHHHHHHHhhcCcc
Q psy12153 36 LYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFF--VQGLQNSTYTLLIELFPTR 113 (236)
Q Consensus 36 ~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~--~~~~~~~~~~~~~e~~~~~ 113 (236)
...+...+.++..|.++||+|||..+.+......+......+.. +|.++ +.++. .+...+...++++|....+
T Consensus 70 ~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~ 144 (463)
T KOG2816|consen 70 TAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEE 144 (463)
T ss_pred hhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-HHHhh----hcccccchhhhhhhhhhheeeccchh
Confidence 44667788899999999999999999999999888888777655 33222 33332 3355677789999999999
Q ss_pred ccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhHHHHHHHHHHhhcccchh
Q psy12153 114 WRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLPFVGFSLFYVWFIPESPL 188 (236)
Q Consensus 114 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~~~~~~~~~~~~~pet~~ 188 (236)
+| ....++....+..+..++|.+++... +.-.+|.+..+..++..+...+++||+..
T Consensus 145 ~R------------------~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~ 204 (463)
T KOG2816|consen 145 ER------------------SSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQ 204 (463)
T ss_pred HH------------------HHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccC
Confidence 99 89999999999999999998888774 45567777777776677778888999853
No 197
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.52 E-value=1.5e-06 Score=77.80 Aligned_cols=143 Identities=19% Similarity=0.194 Sum_probs=88.4
Q ss_pred eeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHH--------HHHHHHH--HHHHHHHHHH-hccHHHHHHH
Q psy12153 19 LWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVI--------MLISFYG--QGAISIAIVY-NRSFPVYLIL 87 (236)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~--------l~~~~~~--~~~~~~~~~~-~~~~~~~~~~ 87 (236)
+++. +..+.++..++..++..++.++.|+++||+++|+. +..+... ..+..+.... ..+....++.
T Consensus 291 ~~g~---s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (465)
T TIGR00894 291 VLRV---SGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIII 367 (465)
T ss_pred HhCc---ChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHH
Confidence 3455 78888999999999999999999999999865421 1111111 1111111222 2233333333
Q ss_pred HHHHHHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc------hh
Q psy12153 88 RTMQGFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP------NW 161 (236)
Q Consensus 88 ~~l~g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~------~w 161 (236)
-.+.+.+.+...+.......|..|. .+ |...++.+....+|..++|.+.+.+. +|
T Consensus 368 ~~l~~~~~~~~~~~~~~~~~~~~~~-~~------------------g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~ 428 (465)
T TIGR00894 368 LTLANAVSSGPLAGVLINSLDLAPR-FL------------------GFIKGITGLPGFIGGLIASTLAGNILSQDSKNVW 428 (465)
T ss_pred HHHHHHHhhhhhhhhhhchhhcChh-HH------------------HHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHH
Confidence 4444444444444444445566554 56 99999999999999999998888753 37
Q ss_pred HHHHHHHHhHHHHHHHHHHhhcc
Q psy12153 162 RDAELVTSLPFVGFSLFYVWFIP 184 (236)
Q Consensus 162 ~~~~~i~~~~~~~~~~~~~~~~p 184 (236)
+..|.+.++.. ++..+...+.+
T Consensus 429 ~~~f~~~~~~~-~i~~i~~~~~~ 450 (465)
T TIGR00894 429 LIVFLIMAFVN-ILCVIFYLIFG 450 (465)
T ss_pred HHHHHHHHHHH-HHHHHHeeeee
Confidence 78888877766 34333344443
No 198
>PRK11462 putative transporter; Provisional
Probab=98.51 E-value=4.7e-06 Score=74.92 Aligned_cols=148 Identities=14% Similarity=0.075 Sum_probs=100.9
Q ss_pred eeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhh----hCch-HHHHHHHHHHHHHHHHHHHhcc------HHHHHHH
Q psy12153 19 LWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADR----FGRR-VIMLISFYGQGAISIAIVYNRS------FPVYLIL 87 (236)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr----~Grr-~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~ 87 (236)
..++ +....|.+..+.-+.-++.-++.|.++|| +||| +-++++.+..+++..++...++ ...+.+.
T Consensus 39 ~~Gl---~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~ 115 (460)
T PRK11462 39 IFGI---PAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAIT 115 (460)
T ss_pred hhCC---CHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHH
Confidence 4566 88888999999999999999999999996 6875 5556677777777766655442 2223334
Q ss_pred HHHHHHhhhhhhHHHHHHHHhhcC-ccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc----c---
Q psy12153 88 RTMQGFFVQGLQNSTYTLLIELFP-TRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF----P--- 159 (236)
Q Consensus 88 ~~l~g~~~~~~~~~~~~~~~e~~~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~----~--- 159 (236)
-.+..++.........++..|+.+ +++| .+..+.-..+..+|..+++.+...+ .
T Consensus 116 ~~~~~~~~t~~~ipy~al~~~lt~d~~eR------------------t~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~ 177 (460)
T PRK11462 116 YTLLTLLYTVVNIPYCALGGVITNDPTQR------------------ISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDN 177 (460)
T ss_pred HHHHHHHHHHHhccHHHHHHHhcCCHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 444566665666666788888876 6667 8888888888888877766553321 1
Q ss_pred ---hhHHHHHHHHhHHHHHHHHHHhhcccch
Q psy12153 160 ---NWRDAELVTSLPFVGFSLFYVWFIPESP 187 (236)
Q Consensus 160 ---~w~~~~~i~~~~~~~~~~~~~~~~pet~ 187 (236)
+|+....+.+++.++..++.++..+|.+
T Consensus 178 ~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~ 208 (460)
T PRK11462 178 KPLGFQGGIAVLSVVAFMMLAFCFFTTKERV 208 (460)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhcceecc
Confidence 4666666666665444445555556643
No 199
>KOG0252|consensus
Probab=98.51 E-value=7.6e-08 Score=84.47 Aligned_cols=133 Identities=16% Similarity=0.175 Sum_probs=94.7
Q ss_pred HHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcCcccccccc
Q psy12153 40 GVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQNSTYTLLIELFPTRWRIGVA 119 (236)
Q Consensus 40 ~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~e~~~~~~r~~~~ 119 (236)
++..|..+...++|++|||++.+.+.++..+..+..+...|...-..+++ ..+. ..-..++.= ++ +.
T Consensus 360 ~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~-------v~y~-l~~ff~NFG-Pn----~t 426 (538)
T KOG0252|consen 360 STVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFV-------VLYS-LTFFFGNFG-PN----AT 426 (538)
T ss_pred ccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCcee-------ehHH-HHHHHHhcC-CC----ce
Confidence 33446666778999999999999999999998888887655311101100 1111 111222222 22 23
Q ss_pred chhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc--------hhHHHHHHHHhHHHHHHHHHHhhcccc
Q psy12153 120 TYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP--------NWRDAELVTSLPFVGFSLFYVWFIPES 186 (236)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~--------~w~~~~~i~~~~~~~~~~~~~~~~pet 186 (236)
+.++.+|+||+|.|+.+.++..+..-+|.+++.....+.. +.+..+++.+.+. +...+..+++|||
T Consensus 427 tfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~-~~gi~~T~l~pEt 500 (538)
T KOG0252|consen 427 TFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCM-LLGILFTLLIPET 500 (538)
T ss_pred eEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHH-HHhHheeEEeecc
Confidence 5677789999999999999999999999999987766653 4588999999988 7888888899998
No 200
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.49 E-value=7.9e-07 Score=77.34 Aligned_cols=139 Identities=19% Similarity=0.140 Sum_probs=99.9
Q ss_pred eeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhc-------cHHHHHHHHH
Q psy12153 17 VLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNR-------SFPVYLILRT 89 (236)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 89 (236)
+++|++ +..+.+.....+.+...+..+.+|+++||+|.++++.+...+.+++..+..... +.....+..+
T Consensus 246 ~~~fg~---~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 322 (417)
T COG2223 246 VTQFGL---SPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFL 322 (417)
T ss_pred HHhcCC---ChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHH
Confidence 467888 899999999999999999999999999999999999988888888888777643 3333333333
Q ss_pred HHHHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc----hhHHHH
Q psy12153 90 MQGFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP----NWRDAE 165 (236)
Q Consensus 90 l~g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~----~w~~~~ 165 (236)
..+++.|......+.++...+++ +- |.+.++.....++|+...|...+... .+...|
T Consensus 323 ~l~~~~G~GnGsvfk~Ip~if~~-~~------------------G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f 383 (417)
T COG2223 323 ALFVFAGLGNGSVFKMIPVIFPK-ET------------------GAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAF 383 (417)
T ss_pred HHHHHhccCcchheeechHHHHh-hh------------------hHHHHHHHHhccccccchhHHHHHHHHhcccHHHHH
Confidence 33333333334444555555543 34 78899999999999887777665543 477778
Q ss_pred HHHHhHHHHHHH
Q psy12153 166 LVTSLPFVGFSL 177 (236)
Q Consensus 166 ~i~~~~~~~~~~ 177 (236)
++.....++..+
T Consensus 384 ~~~~~~~~~a~v 395 (417)
T COG2223 384 MLLLAFYLVALV 395 (417)
T ss_pred HHHHHHHHHHHH
Confidence 777776634433
No 201
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.48 E-value=1.6e-06 Score=78.04 Aligned_cols=116 Identities=12% Similarity=-0.000 Sum_probs=96.3
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHH----------hccHHHHHHHHHHHHHhh
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVY----------NRSFPVYLILRTMQGFFV 95 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~l~g~~~ 95 (236)
+..+.|.......++.+++....+.+.+|++.|+++.++.++.+++...... .++.+.......+.+++.
T Consensus 286 s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~ 365 (468)
T TIGR00788 286 GPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLA 365 (468)
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHH
Confidence 8999999999999999999999999999999999999999888887755431 133334445567778887
Q ss_pred hhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc
Q psy12153 96 QGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP 159 (236)
Q Consensus 96 ~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~ 159 (236)
+..+.....++.+..|++.+ +...++.+...++|..+++.+++.+.
T Consensus 366 g~~~~~~~~~~~~~~p~~~e------------------gt~~al~~s~~~lg~~v~~~~gg~l~ 411 (468)
T TIGR00788 366 QLKFMPFLVLLARLCPSGCE------------------SSVFALLASILHLGSSVSGFLGVLLM 411 (468)
T ss_pred HHHHccHHHHHHHhCCCCce------------------ehHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777789999999999999 99999999989999999988777763
No 202
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.44 E-value=5.6e-06 Score=74.19 Aligned_cols=148 Identities=11% Similarity=-0.033 Sum_probs=83.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHH-h-----ccHHHHHHHHHHHHHhhhhhhHHHHHHHH
Q psy12153 34 VTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVY-N-----RSFPVYLILRTMQGFFVQGLQNSTYTLLI 107 (236)
Q Consensus 34 ~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~l~g~~~~~~~~~~~~~~~ 107 (236)
..+..+...+..+++|+++||+|+|++++++.++..+....... . .+.+...+..+...++.|......+.++.
T Consensus 292 ~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip 371 (462)
T PRK15034 292 AFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIA 371 (462)
T ss_pred HHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhH
Confidence 34455667888899999999999999999888777766643322 1 23444444444444445555555666666
Q ss_pred hhcCc-cccccc--c-chhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc----hhHHHHHHHHhHHHHHHHHH
Q psy12153 108 ELFPT-RWRIGV--A-TYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP----NWRDAELVTSLPFVGFSLFY 179 (236)
Q Consensus 108 e~~~~-~~r~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~----~w~~~~~i~~~~~~~~~~~~ 179 (236)
..+|+ +.|... . ...... --..+.-|.+.++......+|+.+.|.+.+... ++...|+...+..++...+.
T Consensus 372 ~~f~~~~~~~~~~~~~~~~~~~-~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~ 450 (462)
T PRK15034 372 VIFRQITIYRVKMKGGSDEQAQ-REAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLT 450 (462)
T ss_pred HHHhhhhhhcccccccchhHHh-hHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHH
Confidence 66663 111000 0 000000 000001167788888888888888886654442 46666666666554444444
Q ss_pred Hhh
Q psy12153 180 VWF 182 (236)
Q Consensus 180 ~~~ 182 (236)
+..
T Consensus 451 w~~ 453 (462)
T PRK15034 451 WLV 453 (462)
T ss_pred HHH
Confidence 444
No 203
>KOG4686|consensus
Probab=98.43 E-value=1.6e-06 Score=72.22 Aligned_cols=120 Identities=13% Similarity=0.106 Sum_probs=94.4
Q ss_pred eeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHH-HHHHhccHHHHHHHHHHHHHhh
Q psy12153 17 VLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISI-AIVYNRSFPVYLILRTMQGFFV 95 (236)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~g~~~ 95 (236)
++.|++ |....+.+.+.......+.+++.|.++||+||+...+.+..+..+..- ...+ +.+.-.....+.|+..
T Consensus 292 ~~rfGl---S~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~lGLsy 366 (459)
T KOG4686|consen 292 QKRFGL---SAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMTFLGLSY 366 (459)
T ss_pred HHhhCC---ChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHHHHhhhH
Confidence 567888 888888888888888899999999999999999877665444333222 2222 2333445567778877
Q ss_pred hhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc
Q psy12153 96 QGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP 159 (236)
Q Consensus 96 ~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~ 159 (236)
+......+..++.+.|+++- |++.+..+...++|..+.|++++++.
T Consensus 367 sllAcslWP~va~~vpE~qL------------------GTaygf~qsIqNLgla~i~Iiag~i~ 412 (459)
T KOG4686|consen 367 SLLACSLWPCVASLVPEEQL------------------GTAYGFIQSIQNLGLAFIPIIAGFIA 412 (459)
T ss_pred HHHHHHHhhhhhhhCCHHHh------------------cchHHHHHHHHhhhhhHHhhhhheee
Confidence 66666678889999999988 99999999999999999999999985
No 204
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.43 E-value=2e-09 Score=95.78 Aligned_cols=134 Identities=22% Similarity=0.275 Sum_probs=84.2
Q ss_pred HHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHH--H--hccH-----HHHHHHHHHHHHhhh-hhhHHHHH
Q psy12153 35 TLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIV--Y--NRSF-----PVYLILRTMQGFFVQ-GLQNSTYT 104 (236)
Q Consensus 35 ~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~--~--~~~~-----~~~~~~~~l~g~~~~-~~~~~~~~ 104 (236)
....+...++.+.+..+.||+|||++++.+..+.++++...+ . .++. ...++.-.+.....+ +..+..+.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~ 372 (451)
T PF00083_consen 293 LILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWI 372 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeeeccccccccccccccc
Confidence 344455667777888999999999999999888887777664 1 1111 111111111111111 22333344
Q ss_pred HHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcchh---HHHHHHHHhHHHHHHHHHHh
Q psy12153 105 LLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFPNW---RDAELVTSLPFVGFSLFYVW 181 (236)
Q Consensus 105 ~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~~w---~~~~~i~~~~~~~~~~~~~~ 181 (236)
+..|.+|++.| ....++......++..+++.+.+.+.+. ...+.+.+.+.++..++.++
T Consensus 373 ~~~ElfPt~~R------------------~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~ 434 (451)
T PF00083_consen 373 YTAELFPTKVR------------------STGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYF 434 (451)
T ss_pred ccccccccccc------------------ccccccccccccccccccccccccccccccccccchhhHHHHHHHHhheeE
Confidence 55555555555 8999988888888888887776665421 34556666666577778889
Q ss_pred hcccc
Q psy12153 182 FIPES 186 (236)
Q Consensus 182 ~~pet 186 (236)
++|||
T Consensus 435 ~lpET 439 (451)
T PF00083_consen 435 FLPET 439 (451)
T ss_pred EEeeC
Confidence 99999
No 205
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.43 E-value=7.6e-06 Score=72.28 Aligned_cols=92 Identities=14% Similarity=0.159 Sum_probs=74.7
Q ss_pred eeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhC-chHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhh
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFG-RRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQ 96 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~G-rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~ 96 (236)
++.++ +..+.|.+.++..+..+++++++|.++||.+ +|+.+.+..++.++........++++.+++...+..+...
T Consensus 30 ~~~G~---s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~~~~~l~~~~~~ 106 (400)
T PF03825_consen 30 ESRGF---SGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSFWWLFVIMLLFSFFFS 106 (400)
T ss_pred HhCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHc
Confidence 34455 8999999999999999999999999999985 6777777777777777777778888888877777777777
Q ss_pred hhhHHHHHHHHhhcCc
Q psy12153 97 GLQNSTYTLLIELFPT 112 (236)
Q Consensus 97 ~~~~~~~~~~~e~~~~ 112 (236)
...|...++..+....
T Consensus 107 p~~pl~dsi~~~~~~~ 122 (400)
T PF03825_consen 107 PTMPLSDSIALSYLGD 122 (400)
T ss_pred cHHHHHHHHHHHHccc
Confidence 7777777777777653
No 206
>PRK11043 putative transporter; Provisional
Probab=98.40 E-value=2.5e-05 Score=68.44 Aligned_cols=120 Identities=11% Similarity=-0.052 Sum_probs=85.3
Q ss_pred eeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHH---H--hccHHHHHHHHHHHH
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIV---Y--NRSFPVYLILRTMQG 92 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~l~g 92 (236)
+++++ +..+.++......++..++.+..+++.||+|+|+.+....++.++...... . .++....++...+.|
T Consensus 231 ~~~g~---s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (401)
T PRK11043 231 EQMGY---SPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMA 307 (401)
T ss_pred HHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHH
Confidence 34455 777888888888888899999999999999999876655554444433222 1 234444555566778
Q ss_pred HhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc
Q psy12153 93 FFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP 159 (236)
Q Consensus 93 ~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~ 159 (236)
++.+..++.......+..| ++| ++..++.+.....+...++.+.+.+.
T Consensus 308 ~~~~~~~~~~~~~~~~~~~-~~~------------------g~~~g~~~~~~~~~~~~~~~~~g~l~ 355 (401)
T PRK11043 308 AANGAIYPIVVAQALRPFP-QAT------------------GKAAALQNTLQLGLCFLASLLVSALI 355 (401)
T ss_pred HHHHHHHHHHHHHHhhhCc-ccC------------------hHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 8888888877777777765 468 89999988877777777777766654
No 207
>PRK09848 glucuronide transporter; Provisional
Probab=98.40 E-value=8.9e-06 Score=72.58 Aligned_cols=95 Identities=12% Similarity=0.010 Sum_probs=62.4
Q ss_pred eeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhh----CchHHH-HHHHHHHHHHHHHHHHhc-----c--HHHHH
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRF----GRRVIM-LISFYGQGAISIAIVYNR-----S--FPVYL 85 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~----Grr~~l-~~~~~~~~~~~~~~~~~~-----~--~~~~~ 85 (236)
+.+++ +..+.|.+.++..+...+..++.|+++||. |||+.. +++.+...+...+....+ + ....+
T Consensus 37 ~~~gl---~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (448)
T PRK09848 37 DVAGV---GAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAY 113 (448)
T ss_pred HHcCC---CHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHHH
Confidence 34577 899999999999999999999999999996 766644 555554544444432211 1 12233
Q ss_pred HHHHHHHHhhhhhhHHHHHHHHhhcCc-ccc
Q psy12153 86 ILRTMQGFFVQGLQNSTYTLLIELFPT-RWR 115 (236)
Q Consensus 86 ~~~~l~g~~~~~~~~~~~~~~~e~~~~-~~r 115 (236)
+...+.+++.+...+...++..+.... ++|
T Consensus 114 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r 144 (448)
T PRK09848 114 LTYMGLGLCYSLVNIPYGSLATAMTQQPQSR 144 (448)
T ss_pred HHHHHHHHHHHHhcccHhhhhhhhcCCHHHH
Confidence 344556666666665566666666644 556
No 208
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.36 E-value=2.2e-05 Score=73.41 Aligned_cols=132 Identities=10% Similarity=0.022 Sum_probs=101.4
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHHHhcc--------HHHHHHHHHHHHHhhh
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRF-GRRVIMLISFYGQGAISIAIVYNRS--------FPVYLILRTMQGFFVQ 96 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~-Grr~~l~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~g~~~~ 96 (236)
+......+...+....-+..+++|+++|++ ||+++++++.++..++..+..+... ....+++-.+..+|.|
T Consensus 21 ~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~G 100 (654)
T TIGR00926 21 SESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGTG 100 (654)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhcc
Confidence 677777777777777788899999999965 9999999999998888887776321 1234556667778888
Q ss_pred hhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc----------hhHHHHH
Q psy12153 97 GLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP----------NWRDAEL 166 (236)
Q Consensus 97 ~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~----------~w~~~~~ 166 (236)
+.-+...+...|.++++++ +.|.....++..+.++|+++++.+..++. +|...|.
T Consensus 101 giKp~vsaf~gdqf~~~~~---------------~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~ 165 (654)
T TIGR00926 101 GIKPCVSAFGGDQFEERQL---------------SLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFG 165 (654)
T ss_pred ccccCchhhhHhhcCccch---------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHH
Confidence 8888889999999876433 11267788888889999999988877764 3777777
Q ss_pred HHHhHH
Q psy12153 167 VTSLPF 172 (236)
Q Consensus 167 i~~~~~ 172 (236)
+.++..
T Consensus 166 i~~i~m 171 (654)
T TIGR00926 166 VPAILM 171 (654)
T ss_pred HHHHHH
Confidence 777766
No 209
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.36 E-value=1.8e-05 Score=71.52 Aligned_cols=137 Identities=10% Similarity=0.001 Sum_probs=103.9
Q ss_pred hHHHHHHHHHHHHhhhhhhhh----hhhh-hCchHHH--HHHHHHHHHHHHHHHH---------hccHHHHHHHHHHHHH
Q psy12153 30 NAAVVTLYFLGVILGSIPAGL----LADR-FGRRVIM--LISFYGQGAISIAIVY---------NRSFPVYLILRTMQGF 93 (236)
Q Consensus 30 ~~~~~~~~~l~~~~~~~~~g~----l~Dr-~Grr~~l--~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~g~ 93 (236)
.+++.++..+..++.+++..+ +.+| .+++... .+|.++.+++....++ ..|.+.+++..++.++
T Consensus 314 ~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ 393 (475)
T TIGR00924 314 VIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTL 393 (475)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 567777777777777776554 4443 2333333 6778887777776664 4588889999999999
Q ss_pred hhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHh
Q psy12153 94 FVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSL 170 (236)
Q Consensus 94 ~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~ 170 (236)
+.....|....++.+..|++.| +...++..+...+|..+++.+..... +|...|...++
T Consensus 394 ge~~~~p~~~~~~~~~aP~~~~------------------g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~ 455 (475)
T TIGR00924 394 GELMISPLGLSWWTKIAPQRLM------------------GQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGL 455 (475)
T ss_pred HHHHHhHHHHHHHHHhCCHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHH
Confidence 9999999999999999999999 99999999999999999988877542 57777777777
Q ss_pred HHHHHHHHHHhhcc
Q psy12153 171 PFVGFSLFYVWFIP 184 (236)
Q Consensus 171 ~~~~~~~~~~~~~p 184 (236)
..++..++.++..|
T Consensus 456 ~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 456 VTLLVGVVMALMVP 469 (475)
T ss_pred HHHHHHHHHHHHHH
Confidence 66555555555444
No 210
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.34 E-value=1.6e-05 Score=72.13 Aligned_cols=137 Identities=9% Similarity=0.037 Sum_probs=101.9
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhCchHH-------HHHHHHHHHHHHHHHH-----H-----hccHHHHHHHHHHHH
Q psy12153 30 NAAVVTLYFLGVILGSIPAGLLADRFGRRVI-------MLISFYGQGAISIAIV-----Y-----NRSFPVYLILRTMQG 92 (236)
Q Consensus 30 ~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~-------l~~~~~~~~~~~~~~~-----~-----~~~~~~~~~~~~l~g 92 (236)
..+++++..+..++.+++.+++.||++||+. +.+|.++.+++..... . ..+.+.++..-++.|
T Consensus 311 ~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g 390 (489)
T PRK10207 311 PVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQS 390 (489)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHH
Confidence 3556666667777888889999999998863 6667777666654321 1 124566777888999
Q ss_pred HhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc-------------
Q psy12153 93 FFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP------------- 159 (236)
Q Consensus 93 ~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~------------- 159 (236)
++.+...+....++.+..|++.+ +.++++..+...+|+.++..++....
T Consensus 391 ~Ge~~~~~~g~~~~~~~aP~~~~------------------g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~ 452 (489)
T PRK10207 391 LGELFISALGLAMIAALVPQHLM------------------GFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLP 452 (489)
T ss_pred HHHHHHhHHHHHHHHHhChHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhh
Confidence 99999999999999999999999 99999999999999999988875441
Q ss_pred hhHHHHHHHHhHHHHHHHHHHhhcc
Q psy12153 160 NWRDAELVTSLPFVGFSLFYVWFIP 184 (236)
Q Consensus 160 ~w~~~~~i~~~~~~~~~~~~~~~~p 184 (236)
.+.+.|...++..++.+++.++..|
T Consensus 453 ~~~~~f~~~~~~~~~~~v~~~~~~~ 477 (489)
T PRK10207 453 VYTNVFGKIGLVTLGVAVVMALMVP 477 (489)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2456677667666555555544443
No 211
>KOG0255|consensus
Probab=98.33 E-value=3.1e-05 Score=70.53 Aligned_cols=136 Identities=20% Similarity=0.206 Sum_probs=98.7
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHH---HHHHHHHHHHhhhhhhHHHHHHHHhhc
Q psy12153 34 VTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPV---YLILRTMQGFFVQGLQNSTYTLLIELF 110 (236)
Q Consensus 34 ~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~g~~~~~~~~~~~~~~~e~~ 110 (236)
..........+....+.+.|++|||.....+.++..++++..++...... ..+...+..++.+..+...+.+.+|++
T Consensus 356 ~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~ 435 (521)
T KOG0255|consen 356 FTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELI 435 (521)
T ss_pred HHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 33344445555566678999999999999999999999999888665433 444455555666666666788888888
Q ss_pred CccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcchh-HH-HHHHHHhHHHHHHHHHHhhcccch
Q psy12153 111 PTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFPNW-RD-AELVTSLPFVGFSLFYVWFIPESP 187 (236)
Q Consensus 111 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~~w-~~-~~~i~~~~~~~~~~~~~~~~pet~ 187 (236)
|+..| ..+.+.......+|.+++|.+......+ .. .+.+.+....+.+++..+++|||.
T Consensus 436 pt~~r------------------~~~~~~~~~~~~~~~i~ap~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lpet~ 496 (521)
T KOG0255|consen 436 PTVVR------------------NTAVGAISAAARLGSILAPLFPLLLRQMFPLLGLILFGWLALLLGLLSLLLLPETK 496 (521)
T ss_pred cHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHHHHHHhcCcccC
Confidence 88888 9999999999999999999887655322 21 222235555466667778999984
No 212
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.31 E-value=2e-05 Score=69.73 Aligned_cols=111 Identities=9% Similarity=0.051 Sum_probs=83.4
Q ss_pred chhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhhHHHHHHHH
Q psy12153 28 KWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQNSTYTLLI 107 (236)
Q Consensus 28 ~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~ 107 (236)
...+...+.+..+..+|.+.++++.||+++|+++.+..++..+.+++....++... ...-.+.|++.+..+|..+....
T Consensus 269 ~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~-~~~l~~~glf~s~~fp~i~sl~~ 347 (410)
T TIGR00885 269 GFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVG-LYCLTLCSAFMSLMFPTIYGIAL 347 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344555666778899999999999999999999988888888888877766444 45556778888889999999999
Q ss_pred hhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc
Q psy12153 108 ELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP 159 (236)
Q Consensus 108 e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~ 159 (236)
+..+++.+ ....++.. ..+|+.+.|.+.+.+.
T Consensus 348 ~~~g~~~~------------------~~s~~l~~--~~~Gga~~p~l~G~~~ 379 (410)
T TIGR00885 348 KGLGQDTK------------------YGAAGLVM--AIIGGGIVPPLQGFII 379 (410)
T ss_pred hhhhhhhh------------------hhHHHHHH--HHhccchHHHHHHHHH
Confidence 99987655 32333322 2388888888877764
No 213
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.30 E-value=7.6e-05 Score=67.43 Aligned_cols=163 Identities=18% Similarity=0.057 Sum_probs=101.2
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHH-HHHHHHHHHHHHHHHHh-cc-HHHHHHHHHHHHHhhhhhhHHH
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIM-LISFYGQGAISIAIVYN-RS-FPVYLILRTMQGFFVQGLQNST 102 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l-~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~l~g~~~~~~~~~~ 102 (236)
..+..++..++..+..++..+..|.++|+-|+||-+ .+..++..+.+..+.+. ++ ++...++-.+..++.+......
T Consensus 68 ~~s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfy 147 (477)
T PF11700_consen 68 TSSLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFY 147 (477)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 345567888899999999999999999999866554 45555555666666653 33 3333444445556666667777
Q ss_pred HHHHHhhcCccccccccchhhh--------hhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc-----------hhHH
Q psy12153 103 YTLLIELFPTRWRIGVATYTLL--------IELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP-----------NWRD 163 (236)
Q Consensus 103 ~~~~~e~~~~~~r~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~-----------~w~~ 163 (236)
.+++.|+.+++.+.....-... -|.-....|++..+.-.....+|+++.-.+...+. +.|.
T Consensus 148 na~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~ 227 (477)
T PF11700_consen 148 NAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRV 227 (477)
T ss_pred HHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhH
Confidence 8899999887765100000000 00000011245556555556666666555444331 2477
Q ss_pred HHHHHHhHHHHHHHHHHhhcccchh
Q psy12153 164 AELVTSLPFVGFSLFYVWFIPESPL 188 (236)
Q Consensus 164 ~~~i~~~~~~~~~~~~~~~~pet~~ 188 (236)
.+.+.++.-++..+..++++||.|+
T Consensus 228 ~~~~~a~ww~vfsiP~~~~~~~~~~ 252 (477)
T PF11700_consen 228 AFLIVALWWLVFSIPLFLWLPDRPG 252 (477)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 8888888877788888889999875
No 214
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.28 E-value=4.4e-05 Score=66.71 Aligned_cols=115 Identities=14% Similarity=0.012 Sum_probs=82.4
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHH-HHHHHHHH--hccHHHHHHHHHHHHHhhhhhhHHH
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQG-AISIAIVY--NRSFPVYLILRTMQGFFVQGLQNST 102 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~l~g~~~~~~~~~~ 102 (236)
+..+.++......++..++.++.+++.||++|+........... +....... ..+.+.+.....+.|++.+...+..
T Consensus 241 ~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 320 (394)
T PRK11652 241 SSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLA 320 (394)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 77788888888888888899999999999984433322222222 21111111 2345566677788888888888888
Q ss_pred HHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc
Q psy12153 103 YTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP 159 (236)
Q Consensus 103 ~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~ 159 (236)
..+..|..| +++ +...++.+....+|..+++.+.+.+.
T Consensus 321 ~~~~~~~~~-~~~------------------g~~~~~~~~~~~lg~~~~~~~~~~~~ 358 (394)
T PRK11652 321 TSGAMEPFP-YLA------------------GTAGALLGGLQNIGSGLAALLSAMLP 358 (394)
T ss_pred HHHHHhhcc-ccc------------------hHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 888888886 467 88888988888999999998887774
No 215
>KOG2563|consensus
Probab=98.23 E-value=1.2e-05 Score=70.63 Aligned_cols=144 Identities=12% Similarity=0.076 Sum_probs=103.7
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhc------cHH--HHHHHHHHHHHhhhh
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNR------SFP--VYLILRTMQGFFVQG 97 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~------~~~--~~~~~~~l~g~~~~~ 97 (236)
+.+..-|...+|++.+....+++.|+.|++|-|..++++..+.++++.+-..+. .++ ....+..+.+.++-.
T Consensus 77 s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~F 156 (480)
T KOG2563|consen 77 SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPF 156 (480)
T ss_pred chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhH
Confidence 556667899999999999999999999999999999999999999999877643 223 455666776666554
Q ss_pred hhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---------hhHH--HHH
Q psy12153 98 LQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---------NWRD--AEL 166 (236)
Q Consensus 98 ~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---------~w~~--~~~ 166 (236)
.......+..-||++++| ..+......+..+|..++.++.+.+. .|.. .|+
T Consensus 157 im~lPskiA~~WF~~~qr------------------a~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~ 218 (480)
T KOG2563|consen 157 ILGLPSKIAAVWFPPDQR------------------AIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFL 218 (480)
T ss_pred hhccccHHHHhhCCcchh------------------hhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHH
Confidence 444445677788888888 88888877777788888877777663 3533 344
Q ss_pred HHHhHHHHHHHHHHhhcccch
Q psy12153 167 VTSLPFVGFSLFYVWFIPESP 187 (236)
Q Consensus 167 i~~~~~~~~~~~~~~~~pet~ 187 (236)
...++..+...+..+..++.|
T Consensus 219 ~~~~l~~l~l~l~~~~~~~~P 239 (480)
T KOG2563|consen 219 GVECLAALLLALVLFVFTKKP 239 (480)
T ss_pred HHHHHHHHHHHHHHHhcCCCC
Confidence 444444333444444455544
No 216
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.22 E-value=3.6e-05 Score=66.13 Aligned_cols=146 Identities=11% Similarity=0.048 Sum_probs=109.8
Q ss_pred ceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q psy12153 16 PVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRF-GRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFF 94 (236)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~-Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 94 (236)
+..|-++ |..+.|+..+...+.....++....+++|. ++|+..+....++.++.+.+.+.+....+.. .++.|++
T Consensus 234 ili~~G~---sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~~llG~G 309 (395)
T COG2807 234 ILIDRGL---SAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW-ALLLGLG 309 (395)
T ss_pred HHHHcCC---CHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHhCc
Confidence 4456677 999999999999999999999999999976 7889888888888888888877665444444 4889999
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc----hhHHHHHHHHh
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP----NWRDAELVTSL 170 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~----~w~~~~~i~~~ 170 (236)
.|..++.....+.+-.+..++. +...++.|....+=...+|.+.+++. +|+..+.....
T Consensus 310 ~G~~F~laL~li~~rs~~a~~A-----------------a~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~ 372 (395)
T COG2807 310 QGGAFPLALTLILLRSSDAAIA-----------------AALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLAL 372 (395)
T ss_pred cchHHHHHHHHHHhhcCChHHH-----------------HHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHH
Confidence 9999999988888877655441 55555555555555556777777764 79888877777
Q ss_pred HHHHHHHHHHhh
Q psy12153 171 PFVGFSLFYVWF 182 (236)
Q Consensus 171 ~~~~~~~~~~~~ 182 (236)
..+++.+..+..
T Consensus 373 ~~i~m~i~Gl~a 384 (395)
T COG2807 373 ATLLMLIFGLRA 384 (395)
T ss_pred HHHHHHHHHhhc
Confidence 764444444433
No 217
>KOG3762|consensus
Probab=98.20 E-value=2.9e-06 Score=75.97 Aligned_cols=125 Identities=14% Similarity=0.070 Sum_probs=102.9
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhhHHHHHHHHhh
Q psy12153 30 NAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQNSTYTLLIEL 109 (236)
Q Consensus 30 ~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~e~ 109 (236)
.|....+...+-++.-++.+++.+|+|+-+++.+++.+..+=.+..+...|.|..+...+++|+..+..+..+.+|++..
T Consensus 408 fGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~v 487 (618)
T KOG3762|consen 408 FGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHV 487 (618)
T ss_pred eeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34555556666777778889999999999999999999998888889999999999999999999999999999999999
Q ss_pred cCccccccccchhhhhhccccccchhhHHHHHH-HHHHHHHHHHHHHHhcc---hhHHHHHHHHhHH
Q psy12153 110 FPTRWRIGVATYTLLIELFPTRWRIGVAWVTEI-CWTVGLVMLSLVSYWFP---NWRDAELVTSLPF 172 (236)
Q Consensus 110 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~~ 172 (236)
.|++.| +.+.++.+. ...+|-.+|+++++.+. +-+..|.+.++.+
T Consensus 488 aPp~l~------------------at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAc 536 (618)
T KOG3762|consen 488 APPGLR------------------ATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIAC 536 (618)
T ss_pred CCCcch------------------HHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHH
Confidence 999999 777776643 44566666666666664 5577787777776
No 218
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.18 E-value=8.2e-06 Score=71.87 Aligned_cols=144 Identities=13% Similarity=0.006 Sum_probs=73.9
Q ss_pred eeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHH--HHHHHHHH-H----hccHHH-HHHHHHHH
Q psy12153 20 WHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQ--GAISIAIV-Y----NRSFPV-YLILRTMQ 91 (236)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~--~~~~~~~~-~----~~~~~~-~~~~~~l~ 91 (236)
-|+ +.++.|.+.++..+...+.+++.|.++||+|.||.+++..... ..+.+... + ..|.+. .+++-...
T Consensus 38 ~GL---s~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l 114 (412)
T PF01306_consen 38 AGL---SGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYL 114 (412)
T ss_dssp H------HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTT
T ss_pred cCC---CHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466 9999999999999999999999999999999666555433222 22222221 1 123221 12222223
Q ss_pred HHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc--hhHHHHHHHH
Q psy12153 92 GFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP--NWRDAELVTS 169 (236)
Q Consensus 92 g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~--~w~~~~~i~~ 169 (236)
|+...+..+..-++..+....+ +.-.|=.-...++|.+++..+++.+. +-+..|++..
T Consensus 115 ~~~f~~~~~~~Ea~~er~sr~~--------------------~feYG~~R~wGSig~ai~s~~~G~L~~i~p~~~fwi~s 174 (412)
T PF01306_consen 115 GLVFNAGVPLSEAYAERVSRRN--------------------GFEYGRARMWGSIGFAIASLLAGILFNINPNIIFWIAS 174 (412)
T ss_dssp TTTTTTHHHHHHHHHHHHHHHH--------------------SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcccchHHHHHHHHHHHHh--------------------cCCcchHHHHhhHHHHHHHHHhheeeeeCccHHHHHHH
Confidence 3333333444444444433211 22233344444555555555555543 3355677666
Q ss_pred hHHHHHHHHHHhhcccc
Q psy12153 170 LPFVGFSLFYVWFIPES 186 (236)
Q Consensus 170 ~~~~~~~~~~~~~~pet 186 (236)
...++..++..+.-|+.
T Consensus 175 ~~~~il~lll~~~~~~~ 191 (412)
T PF01306_consen 175 AAAIILLLLLLLLKPDV 191 (412)
T ss_dssp HHHHHHHHHHHSS---S
T ss_pred HHHHHHHHHHHHcCCcC
Confidence 66544555545555443
No 219
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.14 E-value=3.4e-07 Score=83.71 Aligned_cols=124 Identities=12% Similarity=0.027 Sum_probs=2.9
Q ss_pred CcceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHH----------------
Q psy12153 14 GEPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVY---------------- 77 (236)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~---------------- 77 (236)
.++-.+|++ +..+.|++.+.+-++..+..++..++.+|-.|-+.+-+|.++.++++++.++
T Consensus 27 ttiErRF~l---~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~ 103 (539)
T PF03137_consen 27 TTIERRFGL---SSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNS 103 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcccccccc
Confidence 466788999 9999999999999999999999999999987777778888888888887763
Q ss_pred ----------h-------------------c-----cHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcCccccccccchhh
Q psy12153 78 ----------N-------------------R-----SFPVYLILRTMQGFFVQGLQNSTYTLLIELFPTRWRIGVATYTL 123 (236)
Q Consensus 78 ----------~-------------------~-----~~~~~~~~~~l~g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~ 123 (236)
. . -+..++++.++.|+|....++...+|+=|..+++.-
T Consensus 104 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~s-------- 175 (539)
T PF03137_consen 104 NGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNS-------- 175 (539)
T ss_dssp ------------------------------------------------SSS-----------------------------
T ss_pred ccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccC--------
Confidence 0 0 023466788999999999999999999999988877
Q ss_pred hhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc
Q psy12153 124 LIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF 158 (236)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~ 158 (236)
+.-.++......+|.++|.++++.+
T Consensus 176 ----------plYiGi~~~~~~lGPa~Gf~lg~~~ 200 (539)
T PF03137_consen 176 ----------PLYIGILYAMSILGPALGFLLGSFC 200 (539)
T ss_dssp -----------------------------------
T ss_pred ----------ccchhhhhHHhhccHHHHHHHHHHH
Confidence 6667777777777777776666543
No 220
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.13 E-value=9.5e-05 Score=56.64 Aligned_cols=105 Identities=10% Similarity=0.048 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcC
Q psy12153 32 AVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQNSTYTLLIELFP 111 (236)
Q Consensus 32 ~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~e~~~ 111 (236)
...++.+....+++++.+.+.+++|.|+.++++.++..+-.. ..+.++.+.++....+.|++.+..+.....++.+..+
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~-~~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~ 119 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIA-SFFYPNSYTLYPASALLGFGAALLWTAQGTYLTSYST 119 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHH-HHHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCC
Confidence 445556666778888889999999999999999888764433 3456778888899999999999999999999999999
Q ss_pred ccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHH
Q psy12153 112 TRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVS 155 (236)
Q Consensus 112 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~ 155 (236)
++.| ++..++.-.....+.+.|.++.
T Consensus 120 ~~~~------------------~~~~~ifw~i~~~s~i~G~~~~ 145 (156)
T PF05978_consen 120 EETI------------------GRNTGIFWAIFQSSLIFGNLFL 145 (156)
T ss_pred HHHH------------------hhHHHHHHHHHHHHHHHHHHHH
Confidence 8888 8877777666666666665543
No 221
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.11 E-value=0.00012 Score=64.36 Aligned_cols=137 Identities=12% Similarity=0.196 Sum_probs=100.8
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcC
Q psy12153 32 AVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQNSTYTLLIELFP 111 (236)
Q Consensus 32 ~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~e~~~ 111 (236)
-+.-+..-.+....++...+.|..+-|++++++.+...+...+..+.++...+-+..++.|++.+. ....++++-...+
T Consensus 45 ~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~a~-evay~sYiys~v~ 123 (412)
T PF01770_consen 45 EIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLATAA-EVAYYSYIYSVVD 123 (412)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHH-HHHHHHHheeecC
Confidence 344445556677888999999999999999999999899888888999999999999999988755 3445667766666
Q ss_pred ccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc-----hhHHHHHHHHhHHHHHHHHHHhhcccc
Q psy12153 112 TRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP-----NWRDAELVTSLPFVGFSLFYVWFIPES 186 (236)
Q Consensus 112 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~-----~w~~~~~i~~~~~~~~~~~~~~~~pet 186 (236)
+++- .++.+......-+|..++.+++..+. +++....+..... .++++..+++|..
T Consensus 124 ~~~y------------------q~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~-~~a~~~~~fLP~~ 184 (412)
T PF01770_consen 124 KEHY------------------QKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASV-SLALLIALFLPMP 184 (412)
T ss_pred HHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH-HHHHHHHHHcCCC
Confidence 6655 67777777777777777777666653 3454544444333 5667777788876
Q ss_pred hh
Q psy12153 187 PL 188 (236)
Q Consensus 187 ~~ 188 (236)
++
T Consensus 185 ~~ 186 (412)
T PF01770_consen 185 KR 186 (412)
T ss_pred Cc
Confidence 54
No 222
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.08 E-value=8.6e-05 Score=66.33 Aligned_cols=150 Identities=13% Similarity=0.124 Sum_probs=112.5
Q ss_pred eeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhh----hCc-hHHHHHHHHHHHHHHHHHHHhcc------HHHHHH
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADR----FGR-RVIMLISFYGQGAISIAIVYNRS------FPVYLI 86 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr----~Gr-r~~l~~~~~~~~~~~~~~~~~~~------~~~~~~ 86 (236)
..+++ +....|.+..+.-+.-++.-++.|.++|| +|| ||-++++.+..++.+.++..+++ ....++
T Consensus 41 dv~Gi---s~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~v 117 (467)
T COG2211 41 DVFGL---SAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALV 117 (467)
T ss_pred cccCC---cHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHH
Confidence 45677 88888888888888889999999999996 675 56777888888888888887663 233445
Q ss_pred HHHHHHHhhhhhhHHHHHHHHhhcC-ccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc------
Q psy12153 87 LRTMQGFFVQGLQNSTYTLLIELFP-TRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP------ 159 (236)
Q Consensus 87 ~~~l~g~~~~~~~~~~~~~~~e~~~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~------ 159 (236)
.-.+.+++.........++..|+.+ +++| .+..+.-+....+|.++...+...+.
T Consensus 118 tY~l~~l~YT~vniPy~al~~~iT~d~~ER------------------~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~ 179 (467)
T COG2211 118 TYMLLGLGYTLVNIPYGALGPEITQDPQER------------------ASLTSWRMVFASLGGLLVAVLFPPLVKLFGGG 179 (467)
T ss_pred HHHHHHHHHHheeCchhhcchhhcCCHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 5566777777776677788888875 5667 88899988888888877766654441
Q ss_pred ----hhHHHHHHHHhHHHHHHHHHHhhcccchh
Q psy12153 160 ----NWRDAELVTSLPFVGFSLFYVWFIPESPL 188 (236)
Q Consensus 160 ----~w~~~~~i~~~~~~~~~~~~~~~~pet~~ 188 (236)
+|+..-.+.+++.++..+++++..+|.+.
T Consensus 180 ~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~ 212 (467)
T COG2211 180 DKALGYQGTALVLGVIGVILLLFCFFNVKERVV 212 (467)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHhhcccC
Confidence 57777777777776667777777777653
No 223
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.07 E-value=0.00021 Score=64.54 Aligned_cols=142 Identities=15% Similarity=-0.026 Sum_probs=104.6
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhCc-hHHHHHHHHHHHHHHHHHHHhcc---------------------HHHHHHH
Q psy12153 30 NAAVVTLYFLGVILGSIPAGLLADRFGR-RVIMLISFYGQGAISIAIVYNRS---------------------FPVYLIL 87 (236)
Q Consensus 30 ~~~~~~~~~l~~~~~~~~~g~l~Dr~Gr-r~~l~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~ 87 (236)
..+...++.+...+.++.-..+.+|+|+ |++..++.++.+++.....+.++ .+..++.
T Consensus 307 G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 386 (477)
T TIGR01301 307 GAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIV 386 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHH
Confidence 3455566666667888888899999985 67768887777777666654332 2556667
Q ss_pred HHHHHHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc-----hhH
Q psy12153 88 RTMQGFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP-----NWR 162 (236)
Q Consensus 88 ~~l~g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~-----~w~ 162 (236)
..+.|+..+..+...++++++..+++.|.. |..+++.+.+..+..++..+..+.+. +-.
T Consensus 387 ~~~~Gi~~A~~~siPfal~s~~~~~~~~~~----------------G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~ 450 (477)
T TIGR01301 387 FAILGIPLAITYSIPFALASIRSSNLGAGQ----------------GLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNL 450 (477)
T ss_pred HHHhhHHHHHHHHHhHHHHHHHccccCCCC----------------cchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCe
Confidence 778899999999999999999998532211 88899999998888888876555532 235
Q ss_pred HHHHHHHhHHHHHHHHHHhhcccch
Q psy12153 163 DAELVTSLPFVGFSLFYVWFIPESP 187 (236)
Q Consensus 163 ~~~~i~~~~~~~~~~~~~~~~pet~ 187 (236)
.++.+.++..++.+++..+.+|.++
T Consensus 451 ~~~~~~gv~~~~aa~~~~~~~~~~~ 475 (477)
T TIGR01301 451 PAFVVGAVAAFVSGLLALILLPRPR 475 (477)
T ss_pred eHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 6777888888777888888899764
No 224
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.06 E-value=1.6e-05 Score=68.52 Aligned_cols=107 Identities=24% Similarity=0.252 Sum_probs=75.5
Q ss_pred eeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHH--hc--cHHHHHHHHHHHHHh
Q psy12153 19 LWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVY--NR--SFPVYLILRTMQGFF 94 (236)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~l~g~~ 94 (236)
.+++ +..+.+...++..+...++.+++|+++||+|||+.+..+..+...+...... .+ +.+...+...+.++.
T Consensus 255 ~~g~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (366)
T TIGR00886 255 QFGL---SKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFF 331 (366)
T ss_pred HcCC---cHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHH
Confidence 4555 7888888899999999999999999999999998877776666555554443 22 444444444445555
Q ss_pred hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHH
Q psy12153 95 VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVG 147 (236)
Q Consensus 95 ~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 147 (236)
.|...+....++.+..| +++ +...++.+...++|
T Consensus 332 ~g~~~~~~~~~~~~~~~-~~~------------------g~~~g~~~~~~~~g 365 (366)
T TIGR00886 332 SGAGNGSTFALVPHIFR-RAT------------------GAVSGLVGAIGNLG 365 (366)
T ss_pred hccccchhhhcchhhch-hhc------------------ccHHHHHHHhccCC
Confidence 55555666777788876 467 88888777655543
No 225
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=97.91 E-value=8e-05 Score=63.50 Aligned_cols=92 Identities=13% Similarity=0.054 Sum_probs=73.6
Q ss_pred HhccHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHH
Q psy12153 77 YNRSFPVYLILRTMQGFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSY 156 (236)
Q Consensus 77 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~ 156 (236)
...+++.+++..++.|.|.+...+..+.++++..+++++ ++.+++.+.++.+|..++|.+..
T Consensus 6 ~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~------------------~~~l~~~~~~~~~G~~~gP~i~~ 67 (310)
T TIGR01272 6 SQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETA------------------ASRLALTQAFNKLGTTVAPLFGG 67 (310)
T ss_pred HhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchH------------------HHHHHHHHHHhhhHHHHHHHHHH
Confidence 456788999999999999999999999999999999888 99999999999999999999988
Q ss_pred hcc-------------------hhHHHHHHHHhHHHHHHHHH-Hhhcccc
Q psy12153 157 WFP-------------------NWRDAELVTSLPFVGFSLFY-VWFIPES 186 (236)
Q Consensus 157 ~~~-------------------~w~~~~~i~~~~~~~~~~~~-~~~~pet 186 (236)
.+. .|+++|++.+...+++.++. +.-+||.
T Consensus 68 ~~i~~~~~~~~~~~~~~~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~ 117 (310)
T TIGR01272 68 SLILSGAGDLSMQVATANAEAAKVHTPYLLLAGALAVLAIIFAFLPLPEL 117 (310)
T ss_pred HHHhcCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCC
Confidence 543 57888886666653433322 3334553
No 226
>KOG3764|consensus
Probab=97.81 E-value=9.8e-05 Score=64.24 Aligned_cols=142 Identities=14% Similarity=0.040 Sum_probs=106.1
Q ss_pred cchhHHHHHHHHHHHHhhhhhhhhhhhhhC--chHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhhHHHHH
Q psy12153 27 CKWNAAVVTLYFLGVILGSIPAGLLADRFG--RRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQNSTYT 104 (236)
Q Consensus 27 ~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~G--rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~ 104 (236)
..+.|+...-..+.+.++..+.|.++||++ |......+.+.....+....+.+++..+++-++..+++.+...+....
T Consensus 305 ~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P 384 (464)
T KOG3764|consen 305 GWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIP 384 (464)
T ss_pred CcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhh
Confidence 445666666788889999999999999999 766666777777777777788999999988888888887777777667
Q ss_pred HHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhHHHHHHHHHH
Q psy12153 105 LLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLPFVGFSLFYV 180 (236)
Q Consensus 105 ~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~~~~~~~~~~ 180 (236)
.+.++.+.++-.+ -+.-|...++.+.++.+|..+||.+++.+. |.+|.-.+.++..+.-+.+..
T Consensus 385 ~l~~lvd~rh~s~------------~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~ 451 (464)
T KOG3764|consen 385 TLGYLVDPRHVSG------------FNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLL 451 (464)
T ss_pred hhHHhcchhhccc------------cceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHHH
Confidence 7777665433200 001178899999999999999999999885 667776677777644444333
No 227
>PTZ00207 hypothetical protein; Provisional
Probab=97.80 E-value=0.0011 Score=61.41 Aligned_cols=136 Identities=6% Similarity=-0.107 Sum_probs=96.0
Q ss_pred HHHHHHHHHHhhhhhhhhhhhh---------hCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhhHHHH
Q psy12153 33 VVTLYFLGVILGSIPAGLLADR---------FGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQNSTY 103 (236)
Q Consensus 33 ~~~~~~l~~~~~~~~~g~l~Dr---------~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 103 (236)
.++++.++..+|-+..|.++.- +.|--.+.+..+ ..++.+++.+......+.+.-++.|++.|..++...
T Consensus 396 ~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~ 474 (591)
T PTZ00207 396 LTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPKAALPLPYFIAAFANGFMAATIA 474 (591)
T ss_pred ehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHH
Confidence 6788888888888888887721 222222333344 555555555554446788999999999999999999
Q ss_pred HHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHH-HHHHHhcc-------------h---hHHHHH
Q psy12153 104 TLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVML-SLVSYWFP-------------N---WRDAEL 166 (236)
Q Consensus 104 ~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~-~~i~~~~~-------------~---w~~~~~ 166 (236)
..++|+|. |+- |+...+......+|+.+- ..+.+.+. | .+.+|+
T Consensus 475 ~i~selFg-k~~------------------g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~ 535 (591)
T PTZ00207 475 LVTRTIFA-KDP------------------AKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLA 535 (591)
T ss_pred HHHHHHhc-cch------------------HHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHH
Confidence 99999999 777 888888888888888876 34444432 1 578899
Q ss_pred HHHhHHHHHHHHHHhhcccchh
Q psy12153 167 VTSLPFVGFSLFYVWFIPESPL 188 (236)
Q Consensus 167 i~~~~~~~~~~~~~~~~pet~~ 188 (236)
+.+.++++..+....+.-++.+
T Consensus 536 v~~~~~~~g~~~s~~l~~R~r~ 557 (591)
T PTZ00207 536 FLLGLSFLAFITSTYVHLQYRR 557 (591)
T ss_pred HHHHHHHHHHHHHhheeeehHH
Confidence 8888884544444444445543
No 228
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.78 E-value=0.00062 Score=59.57 Aligned_cols=122 Identities=18% Similarity=0.114 Sum_probs=90.6
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhC-----chHHHHH-HHHHHHHHHHHHHH-----hc----
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFG-----RRVIMLI-SFYGQGAISIAIVY-----NR---- 79 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~G-----rr~~l~~-~~~~~~~~~~~~~~-----~~---- 79 (236)
.++.|+++ ...-.+....+..+.. ...+.+|..||+.+ ||.-+++ |.++++.+..+..+ ..
T Consensus 5 VMIvEL~v---pA~lv~~lval~~~~a-p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~ 80 (403)
T PF03209_consen 5 VMIVELGV---PAWLVALLVALHYLVA-PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQ 80 (403)
T ss_pred hHHHHhcc---HHHHHHHHHHHHHHHH-HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccc
Confidence 35567777 7777777777776654 56888999999999 8866664 55555555544443 22
Q ss_pred ---cHH----HHHHHHHHHHHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHH
Q psy12153 80 ---SFP----VYLILRTMQGFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLS 152 (236)
Q Consensus 80 ---~~~----~~~~~~~l~g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 152 (236)
+.+ ...+...+.|++.+.......++++|..|+++| ++..++...+-.+|.+++.
T Consensus 81 ~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R------------------~~~v~ivw~Mli~G~iv~a 142 (403)
T PF03209_consen 81 SSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERR------------------PRVVAIVWVMLIVGIIVSA 142 (403)
T ss_pred cccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhh------------------hhhHHHHHHHHHHHHHHHH
Confidence 222 223445678888888888889999999999999 9999999999999999998
Q ss_pred HHHHhc
Q psy12153 153 LVSYWF 158 (236)
Q Consensus 153 ~i~~~~ 158 (236)
.+.+.+
T Consensus 143 i~~g~l 148 (403)
T PF03209_consen 143 IVFGRL 148 (403)
T ss_pred HHHHHH
Confidence 877755
No 229
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.73 E-value=0.0028 Score=55.51 Aligned_cols=120 Identities=11% Similarity=0.041 Sum_probs=100.4
Q ss_pred eeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhh-hhCchHHHHHHHHHHHHHHHHHHH---hccHHHHHHHHHHHHH
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLAD-RFGRRVIMLISFYGQGAISIAIVY---NRSFPVYLILRTMQGF 93 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~D-r~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~g~ 93 (236)
+.|++ +..+...++..+..|..++....|++.. |.+++++..+++.+..++...... ..+.+.+...-++.|+
T Consensus 237 ~Vfgm---sv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~ 313 (403)
T PF03209_consen 237 EVFGM---SVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGL 313 (403)
T ss_pred HHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHH
Confidence 45888 8999999999999999999999998777 778888888888888777766544 4577888888899999
Q ss_pred hhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc
Q psy12153 94 FVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF 158 (236)
Q Consensus 94 ~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~ 158 (236)
+.|.........+-+...+++. |..++.+.....++..++..+++.+
T Consensus 314 g~G~f~vgals~mM~lt~~~~a------------------G~~mG~WGaaQA~A~Glg~~~GG~~ 360 (403)
T PF03209_consen 314 GNGLFTVGALSLMMDLTSAGRA------------------GLFMGAWGAAQAIARGLGTFLGGAL 360 (403)
T ss_pred hhhHHHHHHHHHHHhCCCCcch------------------hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998888888899999988877 8899999888888888877777665
No 230
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=97.69 E-value=0.0022 Score=56.77 Aligned_cols=132 Identities=7% Similarity=-0.068 Sum_probs=74.7
Q ss_pred eeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHH-----HhccHHHHHHHHHHHHH
Q psy12153 19 LWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIV-----YNRSFPVYLILRTMQGF 93 (236)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~g~ 93 (236)
.+|. +..+.++.......+..+++...+.+.+|.++++.+.....+..++..+.. ..++++...+..++.++
T Consensus 248 ~~g~---s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~ 324 (413)
T PRK15403 248 AGGM---TTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTSLYAF 324 (413)
T ss_pred hcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHH
Confidence 3456 888888888778888888888777766444333332222222222222221 12333334566777788
Q ss_pred hhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcch--hHHHHHHHHhH
Q psy12153 94 FVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFPN--WRDAELVTSLP 171 (236)
Q Consensus 94 ~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~~--w~~~~~i~~~~ 171 (236)
+.+...+......- ......+ |+..+........+..+++..++++.+ -...|...++.
T Consensus 325 G~~~~~p~~~~~al-~~~~~~~------------------G~a~a~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 385 (413)
T PRK15403 325 GIGLIFPTLFRFTL-FSNNLPK------------------GTVSASLNMVILMVMAVSVEIGRWLWFNGGRLPFHLLAVV 385 (413)
T ss_pred HHHHHhHHHHHHHh-ccCCCCC------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHH
Confidence 87777666554221 1122235 777777777777777777777776642 24455544444
Q ss_pred H
Q psy12153 172 F 172 (236)
Q Consensus 172 ~ 172 (236)
.
T Consensus 386 ~ 386 (413)
T PRK15403 386 A 386 (413)
T ss_pred H
Confidence 3
No 231
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.67 E-value=0.00097 Score=61.62 Aligned_cols=109 Identities=12% Similarity=0.037 Sum_probs=74.5
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhCch-HHHHHHHHHHHHHHHHHHH--hccHHHHHHHHHHHHHhhhhhhHHHHHH
Q psy12153 29 WNAAVVTLYFLGVILGSIPAGLLADRFGRR-VIMLISFYGQGAISIAIVY--NRSFPVYLILRTMQGFFVQGLQNSTYTL 105 (236)
Q Consensus 29 ~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr-~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 105 (236)
..++....+.++..++.++.|.+.-+++|- ..++++.++..+++-.++. .+|....+...++.|++.|.........
T Consensus 350 ~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~ 429 (599)
T PF06609_consen 350 EIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVI 429 (599)
T ss_pred eeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHe
Confidence 457778888888899999999999888764 4445666665554444443 3355555667788888888776666666
Q ss_pred HHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHH
Q psy12153 106 LIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVS 155 (236)
Q Consensus 106 ~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~ 155 (236)
..-..|.+.- +.+.++....-.+|+.++..+.
T Consensus 430 ~ql~~p~~~i------------------g~a~gL~~s~R~~GGsIg~aIy 461 (599)
T PF06609_consen 430 AQLIVPDEDI------------------GTATGLTGSIRSIGGSIGYAIY 461 (599)
T ss_pred eEeeeCchHH------------------HHHHHHHHHHHHHhhHHHHHHH
Confidence 6666666655 7777777777667666665443
No 232
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.63 E-value=0.00019 Score=48.94 Aligned_cols=67 Identities=15% Similarity=0.112 Sum_probs=60.4
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHH
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVY 84 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~ 84 (236)
.+++|.++ +..+.+++.+..++|+.+|++....+.++..+++.+..+.+...+....+++.++.+.+
T Consensus 17 ~M~~~~~l---s~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w 83 (85)
T PF06779_consen 17 LMQADGGL---SLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLW 83 (85)
T ss_pred HHHHhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 35678888 99999999999999999999999999999888999999999999999999988877654
No 233
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.62 E-value=0.001 Score=59.40 Aligned_cols=148 Identities=18% Similarity=0.082 Sum_probs=101.6
Q ss_pred eeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhh---C--chHHHHHHHHHHHHHHHHHHHhc----cHHHHHHHH
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRF---G--RRVIMLISFYGQGAISIAIVYNR----SFPVYLILR 88 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~---G--rr~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 88 (236)
+++++ ++.+.....++..+.. ...++.|.++|-+ | ||+-++++.++..++....+..+ +.....+.-
T Consensus 18 ~~l~l---s~~~~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l 93 (433)
T PF03092_consen 18 DDLGL---SPAQLQRLSSLASLPW-SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLL 93 (433)
T ss_pred HHcCC---CHHHHHHHHHHHhCch-HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHH
Confidence 46788 8888777776666554 4567899999987 3 66666777777766666555433 344455555
Q ss_pred HHHHHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHH
Q psy12153 89 TMQGFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAE 165 (236)
Q Consensus 89 ~l~g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~ 165 (236)
++..++....-...-+++.|....+.. . |+...+.......+|++++..+++.+. +++..|
T Consensus 94 ~la~~g~a~~DV~aDa~vvE~~~~~p~---------------~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f 157 (433)
T PF03092_consen 94 FLASFGYAFADVAADALVVELARREPE---------------S-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVF 157 (433)
T ss_pred HHHHHHHHHHHHhhhHHHHHHhhcCCc---------------h-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEe
Confidence 666677666777778888888754433 1 377788888888889988887777664 567778
Q ss_pred HHHHhHHHHHHHHHHhhccc
Q psy12153 166 LVTSLPFVGFSLFYVWFIPE 185 (236)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~pe 185 (236)
.+.++...+..+...++.+|
T Consensus 158 ~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 158 LISAALPLLMLIVALFLLEE 177 (433)
T ss_pred hHHHHHHHHHHHHHHHhhhh
Confidence 87777774555555566665
No 234
>KOG2532|consensus
Probab=97.59 E-value=0.00035 Score=62.97 Aligned_cols=137 Identities=12% Similarity=0.119 Sum_probs=89.7
Q ss_pred eeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCc---------hHHHHHHHHHHHHHHHHHHHhccHHH-HHHHH
Q psy12153 19 LWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGR---------RVIMLISFYGQGAISIAIVYNRSFPV-YLILR 88 (236)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Gr---------r~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 88 (236)
.+|+ +..+.|+..++..+...+..+.+|.++||.-+ |..-.++..+.++..+..++.++-.. ..+.-
T Consensus 288 VL~f---~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~ 364 (466)
T KOG2532|consen 288 VLGF---DVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVIL 364 (466)
T ss_pred HhCC---ChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHH
Confidence 3556 88899999999999999999999999998844 22334555555566666665543111 11111
Q ss_pred HHHHHhh-hhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc------hh
Q psy12153 89 TMQGFFV-QGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP------NW 161 (236)
Q Consensus 89 ~l~g~~~-~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~------~w 161 (236)
+..+++. |...+..+.-..+.. ++.- +..+++.+....+..+++|.+.+.+. .|
T Consensus 365 l~~~~~~~g~~~~Gf~~~~~~~a-pq~a------------------~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW 425 (466)
T KOG2532|consen 365 LTIAIGLSGFNISGFYKNHQDIA-PQHA------------------GFVMGIINFVGALAGFIAPLLVGIIVTDNTREEW 425 (466)
T ss_pred HHHHHHHcccchhhhHhhhhhcc-chHH------------------HHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHH
Confidence 2222222 222222222222223 3334 89999999999999999999888774 69
Q ss_pred HHHHHHHHhHHHHHHH
Q psy12153 162 RDAELVTSLPFVGFSL 177 (236)
Q Consensus 162 ~~~~~i~~~~~~~~~~ 177 (236)
+.+|++.+++.++..+
T Consensus 426 ~~VF~i~a~i~~~~~i 441 (466)
T KOG2532|consen 426 RIVFLIAAGILIVGNI 441 (466)
T ss_pred HHHHHHHHHHHHHhch
Confidence 9999999998844443
No 235
>KOG2533|consensus
Probab=97.57 E-value=0.00071 Score=61.36 Aligned_cols=90 Identities=19% Similarity=0.190 Sum_probs=57.7
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhh----hCchHHHHHHHHHHHHHH-HHHHHhccHHHHHHHHHHHHHhhhhhhH
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADR----FGRRVIMLISFYGQGAIS-IAIVYNRSFPVYLILRTMQGFFVQGLQN 100 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr----~Grr~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 100 (236)
+..+.+.+...+.++.+++.+.+|+++|| ..+|........+..+.. .......+.......-.....+.....+
T Consensus 307 s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (495)
T KOG2533|consen 307 SELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAI 386 (495)
T ss_pred ChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHhHHHHhcchhhHHHHH
Confidence 78888899999999999999999999999 666666665555544443 3333333233333222333344445555
Q ss_pred HHHHHHHhhcCcccc
Q psy12153 101 STYTLLIELFPTRWR 115 (236)
Q Consensus 101 ~~~~~~~e~~~~~~r 115 (236)
......++....+.|
T Consensus 387 ~~~~w~s~~~~g~~k 401 (495)
T KOG2533|consen 387 IALSWTSANLAGNTK 401 (495)
T ss_pred HHHhhccccccchHH
Confidence 666677777765555
No 236
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.55 E-value=0.0019 Score=56.36 Aligned_cols=113 Identities=11% Similarity=0.103 Sum_probs=92.5
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhhHHHHHH
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQNSTYTL 105 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 105 (236)
+..+.+...+.+..+.++|.+.+.++..|+...+.+.+..++..+.++...+.++...+. .-++.|++.+..+|...+.
T Consensus 270 ~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g~v~~~-~l~~ig~F~simfPTIfsl 348 (422)
T COG0738 270 NEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGGVVALY-ALFLIGLFNSIMFPTIFSL 348 (422)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcChHHHH-HHHHHHHHhHHHHHHHHHH
Confidence 778889999999999999999999999999999999988888888888888888854443 4466789999999999999
Q ss_pred HHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc
Q psy12153 106 LIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP 159 (236)
Q Consensus 106 ~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~ 159 (236)
..+..+.+. ...+..-++..+|+.+.|.+.+++.
T Consensus 349 al~~l~~~t--------------------s~~s~~l~maivGGAiiP~l~G~i~ 382 (422)
T COG0738 349 ALKNLGEHT--------------------SVGSGLLVMAIVGGAIIPPLQGVIA 382 (422)
T ss_pred HHhccCccc--------------------cccceeeeeheecchHHHHHHHHHH
Confidence 999998443 3344455566678888888888775
No 237
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.46 E-value=0.0056 Score=55.63 Aligned_cols=139 Identities=6% Similarity=-0.010 Sum_probs=99.5
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhCc--h----H-HHHHHHHHHHHHHHHHHHh---------ccHHHHHHHHHHHH
Q psy12153 29 WNAAVVTLYFLGVILGSIPAGLLADRFGR--R----V-IMLISFYGQGAISIAIVYN---------RSFPVYLILRTMQG 92 (236)
Q Consensus 29 ~~~~~~~~~~l~~~~~~~~~g~l~Dr~Gr--r----~-~l~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~g 92 (236)
..+|.+++..+..++.+++.+++=.|.+| | + =+-+|+++.+++...+.+. .+.+++++..++++
T Consensus 309 p~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t 388 (493)
T PRK15462 309 PTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMG 388 (493)
T ss_pred CHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHH
Confidence 35677788888788888887777666632 2 1 1567777777777666431 25566778888899
Q ss_pred HhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHH-HHHHHHHHHHHHHhcc------------
Q psy12153 93 FFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEIC-WTVGLVMLSLVSYWFP------------ 159 (236)
Q Consensus 93 ~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~l~~~i~~~~~------------ 159 (236)
++.-...|+..+.++++.|++.| +..++.+.+. ..+|..++..+.....
T Consensus 389 ~gEl~~sPvgls~~~~laP~~~~------------------g~~mg~w~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 450 (493)
T PRK15462 389 FAELFIDPVAMSQITRIEIPGVT------------------GVLTGIYMLLSGAIANYLAGVIADQTSQASFDASGAINY 450 (493)
T ss_pred HHHHHHChHHHHHHHHhChHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccccccc
Confidence 99888899999999999999999 9999998774 4688888777766552
Q ss_pred ---hhHHHHHHHHhHHHHH-HHHHHhhccc
Q psy12153 160 ---NWRDAELVTSLPFVGF-SLFYVWFIPE 185 (236)
Q Consensus 160 ---~w~~~~~i~~~~~~~~-~~~~~~~~pe 185 (236)
++...|...+...++. +++.+.++-+
T Consensus 451 ~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 480 (493)
T PRK15462 451 SINAYIEVFDQITWGALACVGVVLMIWLYQ 480 (493)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2445677777766555 5555555433
No 238
>KOG3626|consensus
Probab=97.43 E-value=0.00016 Score=67.57 Aligned_cols=151 Identities=12% Similarity=0.066 Sum_probs=117.1
Q ss_pred cceeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHh----------------
Q psy12153 15 EPVLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYN---------------- 78 (236)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~---------------- 78 (236)
++-..|++ +..+.|++.+.+-++..+...+..+..-|.-|-+.+-+|.++.++++++.++-
T Consensus 122 tiErRF~i---~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~ 198 (735)
T KOG3626|consen 122 TIERRFKI---SSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQ 198 (735)
T ss_pred hhhhhcCC---CCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhc
Confidence 34457888 88999999999999999999999999999988888888999998888877640
Q ss_pred ----c---------------------------c----H-HHHHHHHHHHHHhhhhhhHHHHHHHHhhcCccccccccchh
Q psy12153 79 ----R---------------------------S----F-PVYLILRTMQGFFVQGLQNSTYTLLIELFPTRWRIGVATYT 122 (236)
Q Consensus 79 ----~---------------------------~----~-~~~~~~~~l~g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~ 122 (236)
+ . . ..++.+.++.|+|....++...+|+=|...+++-
T Consensus 199 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~S------- 271 (735)
T KOG3626|consen 199 SVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNS------- 271 (735)
T ss_pred cccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCC-------
Confidence 0 0 1 2456778999999999999999999999988876
Q ss_pred hhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc----------------------hhHHHHHHHHhHHHHHHHHHH
Q psy12153 123 LLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP----------------------NWRDAELVTSLPFVGFSLFYV 180 (236)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~----------------------~w~~~~~i~~~~~~~~~~~~~ 180 (236)
..-.++......+|.++|-+++++.. .|+.-|++.+.+. +...+.+
T Consensus 272 -----------plYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~-~~~a~p~ 339 (735)
T KOG3626|consen 272 -----------PLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALL-LFSAVPL 339 (735)
T ss_pred -----------cHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHH-HHHHHHH
Confidence 77778888888888888777776651 2555667777776 4455556
Q ss_pred hhcccch
Q psy12153 181 WFIPESP 187 (236)
Q Consensus 181 ~~~pet~ 187 (236)
+++|.+.
T Consensus 340 f~fPk~l 346 (735)
T KOG3626|consen 340 FFFPKEL 346 (735)
T ss_pred HhCcccC
Confidence 6667653
No 239
>KOG4686|consensus
Probab=97.26 E-value=7.2e-05 Score=62.56 Aligned_cols=115 Identities=17% Similarity=0.061 Sum_probs=89.5
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhh-hCchHHHHHHHHHHHHHHHHHH---HhccHHHHHHHHHHHHHhhhhhhHH
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADR-FGRRVIMLISFYGQGAISIAIV---YNRSFPVYLILRTMQGFFVQGLQNS 101 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr-~Grr~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~g~~~~~~~~~ 101 (236)
+..+..++-++|..-..+-.+++|++.|| +|-|..-++-++...++.++.+ ..+.+|.+..+|++.|+|.-.....
T Consensus 77 ~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVa 156 (459)
T KOG4686|consen 77 EYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVA 156 (459)
T ss_pred ceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhh
Confidence 45566778888999999999999999996 5877766666666666666655 4788999999999999986555555
Q ss_pred HHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc
Q psy12153 102 TYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF 158 (236)
Q Consensus 102 ~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~ 158 (236)
-..+...++..|+- +.++++......+|+.+-..+.+++
T Consensus 157 QN~yav~wFKGKEL------------------n~vfGlqlSvAR~GstvNf~lm~~l 195 (459)
T KOG4686|consen 157 QNKYAVYWFKGKEL------------------NFVFGLQLSVARLGSTVNFLLMPFL 195 (459)
T ss_pred hcceeEEEecCccc------------------cchhhHHHHHHHhhceeeeeecHHH
Confidence 67888899988888 8999988888888876655444444
No 240
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.25 E-value=0.00067 Score=45.55 Aligned_cols=47 Identities=23% Similarity=0.212 Sum_probs=41.0
Q ss_pred eeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHH
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYG 67 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~ 67 (236)
++.++ +..+.|.+.++..+...++++++|.++||+||++..+.....
T Consensus 28 ~~~Gl---~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 28 KQLGL---SPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred hhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 35667 999999999999999999999999999999998887765543
No 241
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.09 E-value=0.0062 Score=53.10 Aligned_cols=108 Identities=7% Similarity=-0.002 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHHHHHHHHh--c-c------HHHHHHHHHHHHHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccc
Q psy12153 59 VIMLISFYGQGAISIAIVYN--R-S------FPVYLILRTMQGFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFP 129 (236)
Q Consensus 59 ~~l~~~~~~~~~~~~~~~~~--~-~------~~~~~~~~~l~g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~ 129 (236)
++++++.++..++.++..++ + . .+.+.++..+.++|.|+.-+....+.+|.++++++
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~-------------- 67 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDD-------------- 67 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTT--------------
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccch--------------
Confidence 56777888888888874432 1 2 25677888889999999999999999999987632
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHhHHHHHHHHHHhh
Q psy12153 130 TRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAELVTSLPFVGFSLFYVWF 182 (236)
Q Consensus 130 ~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~i~~~~~~~~~~~~~~~ 182 (236)
+.|......+..+.++|..++..+..++. +|...|.+.++.. +++++.++.
T Consensus 68 -~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~-~~~~~~f~~ 121 (372)
T PF00854_consen 68 -SRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGM-LLALIVFLS 121 (372)
T ss_dssp -THHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHH-HHHHHHHHC
T ss_pred -hhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHH-HHHHHHHHh
Confidence 11267778889999999999998888875 7888888877776 444444443
No 242
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=97.07 E-value=0.012 Score=51.84 Aligned_cols=144 Identities=13% Similarity=-0.000 Sum_probs=88.9
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchH-HHHHHHHHHHHHHHHHHHhcc--HHH-HHHHHHHHHHhhhhhhHH
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRV-IMLISFYGQGAISIAIVYNRS--FPV-YLILRTMQGFFVQGLQNS 101 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~-~l~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~l~g~~~~~~~~~ 101 (236)
++...+...++..+..++-++.-|.++|+.|+|| .+-....+..+..+.+.+.++ .+. .++...+..++.......
T Consensus 56 ~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vf 135 (438)
T COG2270 56 STAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVF 135 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhhee
Confidence 4566788888888999999999999999998554 444555555566666666554 333 334445555666566666
Q ss_pred HHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHH------H----hc-----------ch
Q psy12153 102 TYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVS------Y----WF-----------PN 160 (236)
Q Consensus 102 ~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~------~----~~-----------~~ 160 (236)
..+++.++.++++- ++..+.-.....+|+.+.-.+. . .. ..
T Consensus 136 yds~L~~~~~k~~~------------------~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~ 197 (438)
T COG2270 136 YDSMLPRLTTKDNM------------------GRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGED 197 (438)
T ss_pred hhhHhhhhcCcccc------------------CcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCcccccc
Confidence 78889999887655 4433333333333333222111 1 00 02
Q ss_pred hHHHHHHHHhHHHHHHHHHHhhcccch
Q psy12153 161 WRDAELVTSLPFVGFSLFYVWFIPESP 187 (236)
Q Consensus 161 w~~~~~i~~~~~~~~~~~~~~~~pet~ 187 (236)
-|..+.+.++...+..+...+..|+.+
T Consensus 198 ~ri~~~l~A~W~li~~iPm~~~v~~~~ 224 (438)
T COG2270 198 VRITGLLAALWWLLFALPMILNVHDAE 224 (438)
T ss_pred chhHHHHHHHHHHHHHhHHHhcccccc
Confidence 477777777777566666666677654
No 243
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.06 E-value=0.0074 Score=53.95 Aligned_cols=142 Identities=11% Similarity=0.019 Sum_probs=93.4
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHH----------hccHHHHHHHHHHHHHhh
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVY----------NRSFPVYLILRTMQGFFV 95 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~l~g~~~ 95 (236)
+....+.+..+..++..+|...+...--+..-|+++.++.++..+..+.-.. .++.+..+.--.+..+..
T Consensus 253 s~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~ 332 (433)
T PF03092_consen 253 SPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIG 332 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHH
Confidence 7777888888888888888888887777778788888877766655443221 112222222334444444
Q ss_pred hhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc--------hh---HHH
Q psy12153 96 QGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP--------NW---RDA 164 (236)
Q Consensus 96 ~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~--------~w---~~~ 164 (236)
...+-....+.+|..|+... |...++.....++|..++..++..+. ++ .+.
T Consensus 333 ~i~~mP~lvl~a~lcP~G~E------------------gt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~l 394 (433)
T PF03092_consen 333 MIAFMPSLVLAARLCPKGSE------------------GTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLL 394 (433)
T ss_pred HHHHHHHHHHHHHHCCCCch------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHH
Confidence 45555567899999999999 88888888888888888877777663 11 223
Q ss_pred HHHHHhHHHHHHHHHHhhcccc
Q psy12153 165 ELVTSLPFVGFSLFYVWFIPES 186 (236)
Q Consensus 165 ~~i~~~~~~~~~~~~~~~~pet 186 (236)
.++..+.. ++.+....++|+.
T Consensus 395 ili~~~~~-ll~l~ll~lLp~~ 415 (433)
T PF03092_consen 395 ILICSVIQ-LLPLPLLFLLPPQ 415 (433)
T ss_pred HHHHHHHH-HHHHHHHHHcCCC
Confidence 34444444 4444455566764
No 244
>KOG4332|consensus
Probab=97.03 E-value=0.0015 Score=54.48 Aligned_cols=84 Identities=17% Similarity=0.059 Sum_probs=58.6
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhhHHHHH-
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQNSTYT- 104 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~- 104 (236)
...+++.+.....-..++...+.|-++|+-|||+.-+.-++-..++| +.-.++.+-.++++|.+.|+..+..++..-+
T Consensus 70 gkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsC-iTKhSpqYkVLmVGR~LGGiaTsLLFSaFEsW 148 (454)
T KOG4332|consen 70 GKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSC-ITKHSPQYKVLMVGRVLGGIATSLLFSAFESW 148 (454)
T ss_pred cCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHH-HhhcCCceEEEeehhhhhhHHHHHHHHHHHHH
Confidence 55666665555555566777788899999999997554444333333 3567888999999999999988877776544
Q ss_pred HHHhhc
Q psy12153 105 LLIELF 110 (236)
Q Consensus 105 ~~~e~~ 110 (236)
+++|--
T Consensus 149 liaEHn 154 (454)
T KOG4332|consen 149 LIAEHN 154 (454)
T ss_pred HHHHhh
Confidence 444443
No 245
>KOG2816|consensus
Probab=96.95 E-value=0.024 Score=51.15 Aligned_cols=119 Identities=8% Similarity=-0.052 Sum_probs=100.5
Q ss_pred eeeeeeecCcchhHHHHHHHHHHHHhhhhhhh-hhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhh
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFLGVILGSIPAG-LLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQ 96 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g-~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~ 96 (236)
..+++ +..+.+...+.......+++++.. .+...+|-|++...|.....+.....++.++.|.+.....+.++. +
T Consensus 270 ~~f~w---~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~-~ 345 (463)
T KOG2816|consen 270 AKFGW---NKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALA-G 345 (463)
T ss_pred eecCc---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhh-c
Confidence 35666 888888888888888888888776 677888988899999999999999999999999988887776654 4
Q ss_pred hhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc
Q psy12153 97 GLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF 158 (236)
Q Consensus 97 ~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~ 158 (236)
...+...+..+-+..++++ |++.++.+..-.+..+++|.+-+.+
T Consensus 346 ~~~pa~~s~~s~~v~~~e~------------------g~v~~~is~i~~l~~~~~~~~~~~i 389 (463)
T KOG2816|consen 346 IVFPAIRAFASILVSPEEQ------------------GKVFGIISGIEGLSGVVSPALYGNI 389 (463)
T ss_pred chhHHHHhHHHhhcccccc------------------cchhhHHHHHHHHhhhhhHHHHHHH
Confidence 6778888999999999999 9999999999999999988876655
No 246
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=96.95 E-value=0.0035 Score=55.22 Aligned_cols=133 Identities=15% Similarity=0.051 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhhHHHHHHHHhhc
Q psy12153 31 AAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQNSTYTLLIELF 110 (236)
Q Consensus 31 ~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~e~~ 110 (236)
+.+.....+-..+..+.+.++.+|+.-+.=.....++..++.+..+++++.+.-+++-.+.+++.|........+.. .+
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y 140 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-FY 140 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-hc
Confidence 44555555666777788888899887444445556677888888888899888888888888888776665555543 44
Q ss_pred CccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc----hhHHHHHHHHhHHHHHHHHHHhhcccc
Q psy12153 111 PTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP----NWRDAELVTSLPFVGFSLFYVWFIPES 186 (236)
Q Consensus 111 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~----~w~~~~~i~~~~~~~~~~~~~~~~pet 186 (236)
++.. .+.++.+.+.++++|+..-..+. +-|..+++...++++..+..++.+|..
T Consensus 141 ~~~~----------------------l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~~L~~~ 198 (402)
T PF02487_consen 141 GKSS----------------------LSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFFLLPSP 198 (402)
T ss_pred Cccc----------------------cccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 4321 33444444445555544333321 346677777777744544455555543
No 247
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.91 E-value=0.058 Score=48.75 Aligned_cols=116 Identities=5% Similarity=-0.034 Sum_probs=77.8
Q ss_pred CcchhHHHHHHHHHHHHhh-hhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHh--ccH---------------------
Q psy12153 26 ECKWNAAVVTLYFLGVILG-SIPAGLLADRFGRRVIMLISFYGQGAISIAIVYN--RSF--------------------- 81 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~-~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~--------------------- 81 (236)
+.+...++-+...+...+. .++.+++++|++|++++.+......+...+.++. ++.
T Consensus 41 gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~ 120 (472)
T TIGR00769 41 GAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFM 120 (472)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhH
Confidence 4467788888777766666 8899999999999998877655555544444331 111
Q ss_pred --------HHHHHHHHHHHHhhhhhhH-HHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHH
Q psy12153 82 --------PVYLILRTMQGFFVQGLQN-STYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLS 152 (236)
Q Consensus 82 --------~~~~~~~~l~g~~~~~~~~-~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 152 (236)
|...+.-....+-.....+ ..+.+++|.++.++- .+..++..++.++|.++++
T Consensus 121 ~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qa------------------kRfy~l~~~ganlg~i~sg 182 (472)
T TIGR00769 121 GFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEA------------------KRFYALFGLGANVALIFSG 182 (472)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHH------------------HHHHHHHHHHHHHHHHHHH
Confidence 1111112222233333344 557778888877776 8999999999999999999
Q ss_pred HHHHhcc
Q psy12153 153 LVSYWFP 159 (236)
Q Consensus 153 ~i~~~~~ 159 (236)
.+..++.
T Consensus 183 ~~~~~~~ 189 (472)
T TIGR00769 183 RTIKYFS 189 (472)
T ss_pred HHHHHHH
Confidence 8877753
No 248
>KOG3098|consensus
Probab=96.81 E-value=0.084 Score=47.44 Aligned_cols=109 Identities=19% Similarity=0.220 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhh---hhCchHHHHHHHHHHHHHHHHHHHh------------------ccHHHHHHHHH
Q psy12153 31 AAVVTLYFLGVILGSIPAGLLAD---RFGRRVIMLISFYGQGAISIAIVYN------------------RSFPVYLILRT 89 (236)
Q Consensus 31 ~~~~~~~~l~~~~~~~~~g~l~D---r~Grr~~l~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~ 89 (236)
+.......++..++..+.+.+.+ |+||++++.++..+..+.+++..++ +++....+.-+
T Consensus 282 ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~ 361 (461)
T KOG3098|consen 282 AIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGF 361 (461)
T ss_pred HHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHH
Confidence 44444455555666666777765 5799999999988888887776542 23456667778
Q ss_pred HHHHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc
Q psy12153 90 MQGFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF 158 (236)
Q Consensus 90 l~g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~ 158 (236)
+.|++.+......+.+++... +++| ..+.++...-..+++.++-...+..
T Consensus 362 l~G~~D~~~~t~~~~ii~~~~-~~~~------------------~~~fsi~kfyq~~~s~v~~f~~~~~ 411 (461)
T KOG3098|consen 362 LLGFGDACFNTQRYVIIALLY-PDDR------------------AQAFSLFKFYQSVASCVAFFFSPYL 411 (461)
T ss_pred HHhhHHHHHHHHHHHHHHHHh-cCch------------------HHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 899999888888899999999 5667 7777877777777776665555554
No 249
>KOG2615|consensus
Probab=96.36 E-value=0.02 Score=50.04 Aligned_cols=123 Identities=13% Similarity=0.074 Sum_probs=95.6
Q ss_pred eeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhC--chHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFG--RRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFV 95 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~G--rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~ 95 (236)
..++. +..+.|-+.+...+++.+.+.......||.. -+-.+..+..++.-...+.+..+....+..+..+-.+..
T Consensus 290 ~rfg~---ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~ 366 (451)
T KOG2615|consen 290 GRFGY---SSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFST 366 (451)
T ss_pred CccCC---ChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHH
Confidence 34566 7777777777777777777777777788776 556666666666666666666777777777777777776
Q ss_pred hhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcchh
Q psy12153 96 QGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFPNW 161 (236)
Q Consensus 96 ~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~~w 161 (236)
+..-+....++....|.++| |..+|+.....+++-.+||++++....|
T Consensus 367 A~~vt~Lt~Lv~~~~~~~qr------------------G~~~Gi~~Sl~alaRaiGPlv~g~i~~W 414 (451)
T KOG2615|consen 367 ASVVTCLTSLVHKYGPQSQR------------------GTLNGIFRSLGALARAIGPLVSGVIFSW 414 (451)
T ss_pred HHhhHHHHHHHHhcCCcccc------------------hHHHHHHHHHHHHHHHhhhhhhheeEEE
Confidence 66667677888899999999 9999999999999999999999887665
No 250
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=96.29 E-value=0.11 Score=46.84 Aligned_cols=139 Identities=12% Similarity=0.029 Sum_probs=101.4
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhCch-------HHHHHHHHHHHHHHHHHHHh----------ccHHHHHHHHHHH
Q psy12153 29 WNAAVVTLYFLGVILGSIPAGLLADRFGRR-------VIMLISFYGQGAISIAIVYN----------RSFPVYLILRTMQ 91 (236)
Q Consensus 29 ~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr-------~~l~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~l~ 91 (236)
...+.+++..+..++.+++..++.-+.+++ .-+-++.++++.+.++.... .+.++++..-+++
T Consensus 325 p~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~ 404 (498)
T COG3104 325 PPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQ 404 (498)
T ss_pred CHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHH
Confidence 456778888888888888888888876554 22445566666665555432 2467778888999
Q ss_pred HHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHh-------cc--hhH
Q psy12153 92 GFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYW-------FP--NWR 162 (236)
Q Consensus 92 g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~-------~~--~w~ 162 (236)
+++.=...|+..++++...|++-. +..++.+.+....|..++..++.. .. ...
T Consensus 405 s~gEL~iSpvGLs~~t~laP~~~~------------------s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~ 466 (498)
T COG3104 405 SFGELFISPVGLSMVTKLAPPALK------------------SFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEG 466 (498)
T ss_pred HHHHHHhCHHHHHHHHHhChHHHH------------------HHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhh
Confidence 999888889999999999999888 899999999888888888777762 11 335
Q ss_pred HHHHHHHhHHHHHHHHHHhhccc
Q psy12153 163 DAELVTSLPFVGFSLFYVWFIPE 185 (236)
Q Consensus 163 ~~~~i~~~~~~~~~~~~~~~~pe 185 (236)
..|+..+...+++.+.....-|+
T Consensus 467 ~~F~~~g~v~i~~~~~~~~~~~~ 489 (498)
T COG3104 467 RVFGTIGVVAIVIGILLLLLSPK 489 (498)
T ss_pred hhHHHHHHHHHHHHHHHHHhhHH
Confidence 56777777775666655555444
No 251
>PRK03612 spermidine synthase; Provisional
Probab=96.26 E-value=0.31 Score=44.79 Aligned_cols=29 Identities=14% Similarity=0.222 Sum_probs=24.0
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhh
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADR 54 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr 54 (236)
+....+.+.+++.+|..+|+..++++.++
T Consensus 48 s~~~~~~ii~~fl~glalGs~l~~~~~~~ 76 (521)
T PRK03612 48 SVTQFSTVIGLMLFAMGVGALLSKYLLRD 76 (521)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 56677888999999999999988887644
No 252
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=95.98 E-value=0.11 Score=45.94 Aligned_cols=113 Identities=15% Similarity=0.141 Sum_probs=79.8
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHH--HHHHHH---HHhccHHHHHHHHHHHHHhhhhhhH
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQG--AISIAI---VYNRSFPVYLILRTMQGFFVQGLQN 100 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~l~g~~~~~~~~ 100 (236)
..++..+...+|.+|..++.--...+ |+ |++.+.+.+-.. +..++. -+.++.+..++.-+..|+..|..+.
T Consensus 279 ~r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YV 354 (402)
T PF02487_consen 279 PRDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYV 354 (402)
T ss_pred HHHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHH
Confidence 35667778888888877765433322 33 333333322221 111111 2356788888888999999999999
Q ss_pred HHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcch
Q psy12153 101 STYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFPN 160 (236)
Q Consensus 101 ~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~~ 160 (236)
.....+.|-.++++| ..+++..+.+-++|..++.+++..+..
T Consensus 355 NtF~~I~~~~~~~~R------------------EFslg~vsvsds~GI~lAgll~l~le~ 396 (402)
T PF02487_consen 355 NTFYRISEEVPPEDR------------------EFSLGAVSVSDSLGILLAGLLGLPLEP 396 (402)
T ss_pred HHHHHHHhcCCHHHH------------------HHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 888888888888889 999999999999999999998887754
No 253
>KOG1237|consensus
Probab=95.98 E-value=0.045 Score=50.69 Aligned_cols=135 Identities=12% Similarity=0.010 Sum_probs=92.5
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHHHhccH-----------------------
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRF-GRRVIMLISFYGQGAISIAIVYNRSF----------------------- 81 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~-Grr~~l~~~~~~~~~~~~~~~~~~~~----------------------- 81 (236)
+.....-..+.+.-...+..+.+++++|-| ||-+++.++.++..++.++.......
T Consensus 71 ~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~ 150 (571)
T KOG1237|consen 71 SGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKL 150 (571)
T ss_pred chHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchH
Confidence 445555555666666677788899999976 99999999988888886655431111
Q ss_pred --HHHHHHHHHHHHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc
Q psy12153 82 --PVYLILRTMQGFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP 159 (236)
Q Consensus 82 --~~~~~~~~l~g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~ 159 (236)
..+.....+..+|.|+.-+.....-+|-++...+-+ ...+...+..+....++|..++..+..+.+
T Consensus 151 q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~------------~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq 218 (571)
T KOG1237|consen 151 QLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVE------------VKGIPSFFNWFYFSQNGGALLAQTVLVYIQ 218 (571)
T ss_pred HHHHHHHHHHHheeccCCCCCcchhhcccccCccCcch------------hhCcccchhHHHHHHHHHHHHHHHHHHhhh
Confidence 133334445566788888888899999998322200 001146777888888999999888888774
Q ss_pred ---hhHHHHHHHHhHH
Q psy12153 160 ---NWRDAELVTSLPF 172 (236)
Q Consensus 160 ---~w~~~~~i~~~~~ 172 (236)
+|.+.|.+..+..
T Consensus 219 ~~~~w~lgf~i~~~~~ 234 (571)
T KOG1237|consen 219 DNVGWKLGFGIPTVLN 234 (571)
T ss_pred hcccceeeccHHHHHH
Confidence 7887777766665
No 254
>KOG0637|consensus
Probab=95.87 E-value=0.012 Score=52.32 Aligned_cols=116 Identities=18% Similarity=0.154 Sum_probs=78.4
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhh----hCchHHHH-HHHHHHHHHHHHHHHhccH-----------------HH
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADR----FGRRVIML-ISFYGQGAISIAIVYNRSF-----------------PV 83 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr----~Grr~~l~-~~~~~~~~~~~~~~~~~~~-----------------~~ 83 (236)
+....+.+-...-+...+.++..|..+|| ||||+-++ .+.++..++.++.++..+. ..
T Consensus 65 phk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~ 144 (498)
T KOG0637|consen 65 PHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVL 144 (498)
T ss_pred CcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHH
Confidence 33444444445556667788889999995 78776555 5556666666665543221 12
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchh-hHHHHHHHHHHHHHHHHHHHHhcc
Q psy12153 84 YLILRTMQGFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIG-VAWVTEICWTVGLVMLSLVSYWFP 159 (236)
Q Consensus 84 ~~~~~~l~g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~i~~~~~ 159 (236)
.+++..+.-++........-+++.|+...+++ .+ +++.+....++|+.+|..++++..
T Consensus 145 ~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~------------------~~~Ans~f~~f~avGnvLGY~~g~y~~ 203 (498)
T KOG0637|consen 145 FILGFWLLDVANNTLQGPCRALLADLARGDAK------------------KTRANSVFSFFMAVGNVLGYALGSYLG 203 (498)
T ss_pred HHHHhHHHHhhhhhhhhhHHHHHHHhccChhh------------------hhccchhHHHHHHhcceeeeecccccC
Confidence 23333444455556677788999999877776 44 899999999999999998887763
No 255
>KOG3098|consensus
Probab=95.21 E-value=0.13 Score=46.34 Aligned_cols=106 Identities=8% Similarity=0.032 Sum_probs=84.5
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcCcc
Q psy12153 34 VTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQNSTYTLLIELFPTR 113 (236)
Q Consensus 34 ~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~e~~~~~ 113 (236)
..+.+....+..++.+.+.|+.|.|..+.++..+...-...... .|.+-+.....+.|+|.+..+..-..+++|..+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 56667777889999999999999999999998877666554444 45666777888899999888888888999999988
Q ss_pred ccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc
Q psy12153 114 WRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF 158 (236)
Q Consensus 114 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~ 158 (236)
.+ .+..++.-.....+.++|+.+...+
T Consensus 135 ti------------------e~Nisi~Wai~~~~li~Ggi~l~~~ 161 (461)
T KOG3098|consen 135 TI------------------ERNISIFWAIGQSSLIIGGIILFIY 161 (461)
T ss_pred hH------------------HHHHHHHHHHHHHHHHhhhHhheee
Confidence 88 8888887777777777776655443
No 256
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=93.91 E-value=3.4 Score=37.71 Aligned_cols=133 Identities=14% Similarity=0.123 Sum_probs=68.5
Q ss_pred CcchhHHHHHHHHH-HHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHH--hcc-------H-HHHHHH---HHHH
Q psy12153 26 ECKWNAAVVTLYFL-GVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVY--NRS-------F-PVYLIL---RTMQ 91 (236)
Q Consensus 26 ~~~~~~~~~~~~~l-~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~--~~~-------~-~~~~~~---~~l~ 91 (236)
+.+...++-....+ ...+......++++|++|.+++-+..........+.++ .++ . +.-... ..+.
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~ 135 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFK 135 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHH
Confidence 34555566554444 44566778999999999999877655544444443332 111 1 100000 0111
Q ss_pred HHh--hhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc
Q psy12153 92 GFF--VQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP 159 (236)
Q Consensus 92 g~~--~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~ 159 (236)
+.. ..-......-.++|++..=.- .-.=|.++-|+++.+...+...+...+.++|.++++.+..++.
T Consensus 136 ~~i~~~~~Wt~slfYv~aElwgsvvl-SlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~ 204 (491)
T PF03219_consen 136 GFIAMFRNWTFSLFYVMAELWGSVVL-SLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFS 204 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 100 000111122223333321100 0011444455555555589999999999999998887766654
No 257
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=93.69 E-value=2 Score=38.56 Aligned_cols=116 Identities=16% Similarity=0.016 Sum_probs=80.3
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHH---Hhc-------cHHHHHHHHHHHHHhh
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIV---YNR-------SFPVYLILRTMQGFFV 95 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~---~~~-------~~~~~~~~~~l~g~~~ 95 (236)
+....+..-++..+..+.+++.+.++.+|+|..+.=+++.........+.. +.+ +...++.+-.+.-+|.
T Consensus 291 s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GL 370 (432)
T PF06963_consen 291 SPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGL 370 (432)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHH
Confidence 788888889999999999999999999999998888877665554433332 222 1222223333333433
Q ss_pred hhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc
Q psy12153 96 QGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP 159 (236)
Q Consensus 96 ~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~ 159 (236)
=+.--...-++.|..|+++| |..++.-....++-.++...+...++
T Consensus 371 W~fDL~~~qi~Qe~V~~~~R------------------g~v~gvq~sl~~lf~ll~~~~~ii~~ 416 (432)
T PF06963_consen 371 WSFDLAVTQIMQENVPESER------------------GAVSGVQNSLQSLFELLSFVLTIIFP 416 (432)
T ss_pred HhhhHHHHHhhcccCCHHHh------------------hHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 23333456688899999999 99999888877777777766655553
No 258
>KOG2563|consensus
Probab=93.16 E-value=0.18 Score=44.94 Aligned_cols=90 Identities=17% Similarity=0.256 Sum_probs=58.9
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhC-chHHHHHHHHHHHHHHHHHH-Hhc---cHHHHHHHHHHHHHhhhhhhH
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFG-RRVIMLISFYGQGAISIAIV-YNR---SFPVYLILRTMQGFFVQGLQN 100 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~G-rr~~l~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~l~g~~~~~~~~ 100 (236)
+....|++..+..++.++++...|.++||.. -|.+.++......++..... ... ..+.+...-.+.|.+..+..|
T Consensus 299 ~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~P 378 (480)
T KOG2563|consen 299 EGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLP 378 (480)
T ss_pred CccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCC
Confidence 5568899999999999999999999999995 45555665555555532222 211 122333344556777667777
Q ss_pred HHHHHHHhhc-Ccccc
Q psy12153 101 STYTLLIELF-PTRWR 115 (236)
Q Consensus 101 ~~~~~~~e~~-~~~~r 115 (236)
+..-+-.|.. |..++
T Consensus 379 ig~ElgvE~TyPv~E~ 394 (480)
T KOG2563|consen 379 IGFELGVETTYPVAEG 394 (480)
T ss_pred cceeeeeeeccccCCc
Confidence 7777777764 55444
No 259
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=92.87 E-value=6.5 Score=35.76 Aligned_cols=118 Identities=10% Similarity=0.040 Sum_probs=78.1
Q ss_pred cCcchhHHHHHHHHH-HHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHh---------cc----------H---
Q psy12153 25 HECKWNAAVVTLYFL-GVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYN---------RS----------F--- 81 (236)
Q Consensus 25 ~~~~~~~~~~~~~~l-~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~---------~~----------~--- 81 (236)
.++...+++-+...+ +..+..++..++.++..|.+++-+..........++++. ++ .
T Consensus 58 ~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~ 137 (509)
T COG3202 58 QGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMF 137 (509)
T ss_pred CcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCcc
Confidence 366777888887777 678888999999999999998876655555544444431 01 0
Q ss_pred ----------HHHHHHHHHHHHhhhhhhH-HHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHH
Q psy12153 82 ----------PVYLILRTMQGFFVQGLQN-STYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVM 150 (236)
Q Consensus 82 ----------~~~~~~~~l~g~~~~~~~~-~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l 150 (236)
|...+.-.+.-+-.....+ .-+....|.++.++- .+....++++.+++..+
T Consensus 138 l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~ea------------------kRFy~lf~l~~ni~lll 199 (509)
T COG3202 138 LKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEA------------------KRFYPLFGLGANISLLL 199 (509)
T ss_pred ceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHh------------------hhhHHHHHHHHHHHHHH
Confidence 1111111222222222223 335567777776666 89999999999999999
Q ss_pred HHHHHHhcch
Q psy12153 151 LSLVSYWFPN 160 (236)
Q Consensus 151 ~~~i~~~~~~ 160 (236)
++.+..++..
T Consensus 200 sg~~~~~~~k 209 (509)
T COG3202 200 SGEVTSWLSK 209 (509)
T ss_pred HHHHHHHHhh
Confidence 9999888854
No 260
>KOG3762|consensus
Probab=92.73 E-value=0.11 Score=47.33 Aligned_cols=58 Identities=21% Similarity=0.190 Sum_probs=45.8
Q ss_pred eeeeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCc-hHHHHHHHHHHHHHHHHHHH
Q psy12153 17 VLLWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGR-RVIMLISFYGQGAISIAIVY 77 (236)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Gr-r~~l~~~~~~~~~~~~~~~~ 77 (236)
-.++++ +..+.+.++..--+..+++.+++|.++||+-+ |+.++.+.++.....+++.+
T Consensus 38 ~kQLGl---~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a~fll~f 96 (618)
T KOG3762|consen 38 FKQLGL---NPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTATFLLVF 96 (618)
T ss_pred HHHcCC---CHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHHHheee
Confidence 356788 99999999999999999999999999999965 45555555655556665554
No 261
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=92.48 E-value=4 Score=36.65 Aligned_cols=32 Identities=22% Similarity=0.202 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHHHhhcCcc
Q psy12153 81 FPVYLILRTMQGFFVQGLQNSTYTLLIELFPTR 113 (236)
Q Consensus 81 ~~~~~~~~~l~g~~~~~~~~~~~~~~~e~~~~~ 113 (236)
++..++.-++.|++.+........+.+ .+|++
T Consensus 106 f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~ 137 (437)
T TIGR00939 106 FVTTMASVVIINSGMALLQGSLFGLAG-VFPST 137 (437)
T ss_pred HHHHHHHHHHHHhhhhhhcccchhhcc-cCCHH
Confidence 445556667778887777776666666 44444
No 262
>KOG1330|consensus
Probab=91.32 E-value=0.49 Score=42.47 Aligned_cols=30 Identities=17% Similarity=0.268 Sum_probs=25.2
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhh
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRF 55 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~ 55 (236)
+..+..+...++..+..+|.+++|.++||+
T Consensus 281 ~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~ 310 (493)
T KOG1330|consen 281 DHNATLIFGGVTCAGGSLGVLFGGIISDKL 310 (493)
T ss_pred ccccchhhhhHHHhhchhhheehHHHHHHH
Confidence 455666778888899999999999999994
No 263
>KOG3574|consensus
Probab=90.01 E-value=3.9 Score=36.24 Aligned_cols=96 Identities=15% Similarity=0.153 Sum_probs=51.3
Q ss_pred hhhhhhhhh-----hhCchHHHHH-HHHHHHHHHHHHHH-----------hccHHHHHHHHHHHHHhhhhhhHHHHHHHH
Q psy12153 45 SIPAGLLAD-----RFGRRVIMLI-SFYGQGAISIAIVY-----------NRSFPVYLILRTMQGFFVQGLQNSTYTLLI 107 (236)
Q Consensus 45 ~~~~g~l~D-----r~Grr~~l~~-~~~~~~~~~~~~~~-----------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~ 107 (236)
.+.+.++.| |+|||+.-++ +..+....+...+. .++...+.+..++.-+..+.--...-.+..
T Consensus 80 KllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwAL 159 (510)
T KOG3574|consen 80 KLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWAL 159 (510)
T ss_pred HHHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHH
Confidence 346778889 9999986543 23333333333332 122222222222222222221122344555
Q ss_pred hhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc
Q psy12153 108 ELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF 158 (236)
Q Consensus 108 e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~ 158 (236)
.+..+++- |.+......+.++|.+++..+.-.+
T Consensus 160 tmLs~e~l------------------gyaST~q~Vg~~~GyfL~~~ifLaL 192 (510)
T KOG3574|consen 160 TMLSRENL------------------GYASTCQSVGQTAGYFLGNVVFLAL 192 (510)
T ss_pred HhcCHhhc------------------CchhHHHHHHHhhhHHhhcceeeEe
Confidence 66666767 7778888888888888876654444
No 264
>KOG0637|consensus
Probab=89.52 E-value=0.15 Score=45.64 Aligned_cols=129 Identities=16% Similarity=0.052 Sum_probs=80.9
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhhHHHHHH
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQNSTYTL 105 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 105 (236)
....-.|-..++.+...+.+...-++.+|+|-|+.+..+.....++..+.+...+.......+...|+-.+......+..
T Consensus 330 GV~~G~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l 409 (498)
T KOG0637|consen 330 GVRMGCLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGA 409 (498)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHH
Confidence 55555677777888888999999999999997676666666677777777777888777788888885555555555555
Q ss_pred HHhhcCccccccc---cchhhh-hhccccccc-hhhHHHHHHHHHHHHHHHHHH
Q psy12153 106 LIELFPTRWRIGV---ATYTLL-IELFPTRWR-IGVAWVTEICWTVGLVMLSLV 154 (236)
Q Consensus 106 ~~e~~~~~~r~~~---~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~i 154 (236)
+++..-.+.-.+. ++|... .|+-+...+ |...+..++...+-.++....
T Consensus 410 ~~~y~~~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~ 463 (498)
T KOG0637|consen 410 LALYAILGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLG 463 (498)
T ss_pred HHHHHHhCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeecc
Confidence 5555433322111 111111 344444332 666666666666655554433
No 265
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=88.44 E-value=18 Score=32.45 Aligned_cols=141 Identities=11% Similarity=-0.098 Sum_probs=69.2
Q ss_pred chhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHH----H---hcc-----HHHHHHHHHHHHHhh
Q psy12153 28 KWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIV----Y---NRS-----FPVYLILRTMQGFFV 95 (236)
Q Consensus 28 ~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~----~---~~~-----~~~~~~~~~l~g~~~ 95 (236)
.-.+....+-.+..++..+..|...||..|.++...+.+..-++..+.. . .+. .+.......+ -...
T Consensus 38 l~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~-~~~~ 116 (432)
T PF06963_consen 38 LPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFAL-LILL 116 (432)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHH-HHHH
Confidence 3344445555666677888889999999999987776555443332221 1 111 1111111111 1111
Q ss_pred hhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcch---hHHHHHHHHhHH
Q psy12153 96 QGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFPN---WRDAELVTSLPF 172 (236)
Q Consensus 96 ~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~~---w~~~~~i~~~~~ 172 (236)
+.... .......+.-+++ |+-+.---+...+.+.++...-.--+..+++|++.+.+.+ .+....+.+...
T Consensus 117 ~~i~~-Las~~~~iavERD------WVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N 189 (432)
T PF06963_consen 117 GAIER-LASIANTIAVERD------WVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWN 189 (432)
T ss_pred HHHHH-HHHhhhhheeccc------hhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHH
Confidence 11111 1111111111110 1111101122333777777777777888999998888753 455555555555
Q ss_pred HHHH
Q psy12153 173 VGFS 176 (236)
Q Consensus 173 ~~~~ 176 (236)
++..
T Consensus 190 ~~S~ 193 (432)
T PF06963_consen 190 LASV 193 (432)
T ss_pred HHHH
Confidence 3333
No 266
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=87.55 E-value=7.5 Score=35.53 Aligned_cols=87 Identities=15% Similarity=0.055 Sum_probs=63.7
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhCch--HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhhHHHHHHH
Q psy12153 29 WNAAVVTLYFLGVILGSIPAGLLADRFGRR--VIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQNSTYTLL 106 (236)
Q Consensus 29 ~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~ 106 (236)
.+|..-.+..+...+.++..|++-.++.|- ..+-+..++.+...+++...+|.+...++-++.+.......+....-+
T Consensus 299 yNG~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y~flitia~~~i 378 (511)
T TIGR00806 299 YNGAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIYQFLVPIATFQI 378 (511)
T ss_pred cCCHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 667788888888889999999997777553 333444555556666777889999988888888877767777777777
Q ss_pred HhhcCcccc
Q psy12153 107 IELFPTRWR 115 (236)
Q Consensus 107 ~e~~~~~~r 115 (236)
+.....+.-
T Consensus 379 A~~L~~~~~ 387 (511)
T TIGR00806 379 ASSLSKELC 387 (511)
T ss_pred HHHhcccce
Confidence 777665544
No 267
>KOG3810|consensus
Probab=86.85 E-value=1.2 Score=38.84 Aligned_cols=131 Identities=15% Similarity=0.183 Sum_probs=85.9
Q ss_pred HHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcCcccccccc
Q psy12153 40 GVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQNSTYTLLIELFPTRWRIGVA 119 (236)
Q Consensus 40 ~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~e~~~~~~r~~~~ 119 (236)
.+.+.-++.=.+.|..--|++++.-.+..........+.++.+.+=+.-++.|...+. -...++++-+..+++.+
T Consensus 54 SYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAa-EIAYysYIYs~Vd~~~Y---- 128 (433)
T KOG3810|consen 54 SYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAA-EIAYYSYIYSKVDPEMY---- 128 (433)
T ss_pred HHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHHH-HHhhhheeeeecCHHHH----
Confidence 3455556666789988889988877666666666666777877777777777766533 23356777777777777
Q ss_pred chhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc--hhHH--HHHHHHhHHHHHHHHHHhhcccchhH
Q psy12153 120 TYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP--NWRD--AELVTSLPFVGFSLFYVWFIPESPLW 189 (236)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~--~w~~--~~~i~~~~~~~~~~~~~~~~pet~~~ 189 (236)
.+..+......-.|-.++..++..+. +|.. ..=.+.+....++....+++|..+|.
T Consensus 129 --------------qrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rS 188 (433)
T KOG3810|consen 129 --------------KRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKRS 188 (433)
T ss_pred --------------HHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCchh
Confidence 77777777777777777777766664 2211 11233444445666777778876543
No 268
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=83.81 E-value=14 Score=33.26 Aligned_cols=60 Identities=20% Similarity=0.164 Sum_probs=47.5
Q ss_pred cHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHh
Q psy12153 80 SFPVYLILRTMQGFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYW 157 (236)
Q Consensus 80 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~ 157 (236)
+-+..++..++.|+..|-.......+..+..++++| ..+..+..++..+|..+|..++..
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~------------------e~aG~~~~~~l~~Gl~~Gs~l~~~ 430 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHER------------------EVAGALMVIFLLVGLALGAVLSFL 430 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666778889999988888888888888888888 888888888888888888766443
No 269
>KOG1479|consensus
Probab=83.12 E-value=25 Score=31.24 Aligned_cols=31 Identities=26% Similarity=0.187 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHHHhhcC
Q psy12153 81 FPVYLILRTMQGFFVQGLQNSTYTLLIELFP 111 (236)
Q Consensus 81 ~~~~~~~~~l~g~~~~~~~~~~~~~~~e~~~ 111 (236)
+...++.-.+.+.+.+..+...+...+++.+
T Consensus 117 f~vt~~~vv~~~~a~a~~qgs~~G~a~~~P~ 147 (406)
T KOG1479|consen 117 FLVTLIIVVLLNLANAVVQGSLYGLAGLFPS 147 (406)
T ss_pred HHHHHHHHHHHhhhhhhhccchhhhhhcCCH
Confidence 3445555666677776666666666665543
No 270
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=82.76 E-value=15 Score=32.75 Aligned_cols=88 Identities=13% Similarity=0.022 Sum_probs=62.2
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHH--HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhhHHHH
Q psy12153 26 ECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIML--ISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQNSTY 103 (236)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 103 (236)
...-.|.+..+..+...++++..|.+..++.+..-+. ...++.+...+++...+|.+...++-++.+.......+...
T Consensus 283 ~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~ 362 (412)
T PF01770_consen 283 ESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIAS 362 (412)
T ss_pred CcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566788999999999999999999977777654443 34455556666777888888888877777665555555555
Q ss_pred HHHHhhcCcc
Q psy12153 104 TLLIELFPTR 113 (236)
Q Consensus 104 ~~~~e~~~~~ 113 (236)
.-++.....+
T Consensus 363 ~qIA~~l~~e 372 (412)
T PF01770_consen 363 FQIAKNLSEE 372 (412)
T ss_pred HHHHHhcccc
Confidence 5555555443
No 271
>KOG1479|consensus
Probab=82.50 E-value=10 Score=33.66 Aligned_cols=108 Identities=18% Similarity=0.082 Sum_probs=68.9
Q ss_pred HHHHHH-HHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHH-------HHhccHHHHHHHHHHHHHhhhhhhHHH
Q psy12153 31 AAVVTL-YFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAI-------VYNRSFPVYLILRTMQGFFVQGLQNST 102 (236)
Q Consensus 31 ~~~~~~-~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~g~~~~~~~~~~ 102 (236)
.....+ +++.-.+|.+.+.++-+.=.|+.......=...+..+.+ ....+-+.++....+.|+..|-.....
T Consensus 285 ~~~~~l~fN~~d~vG~~~a~~~~~~~~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYltsl~ 364 (406)
T KOG1479|consen 285 LLLVFLSFNVFDLIGSILAALLTWPDPRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLTSLI 364 (406)
T ss_pred HHHHHHHhHHHHHhhhhhhhcccCCCCceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHhhhe
Confidence 444555 888888887766666554434333322222222332221 123455677788888899998888878
Q ss_pred HHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHH
Q psy12153 103 YTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSY 156 (236)
Q Consensus 103 ~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~ 156 (236)
..+..+..+++++ ..+..+..+....|..+|..++.
T Consensus 365 m~~aPk~v~~~e~------------------e~aG~~m~~fl~~Gl~~G~~~s~ 400 (406)
T KOG1479|consen 365 MMYAPKQVKPSEK------------------EAAGNLMVFFLVGGLALGSLLSW 400 (406)
T ss_pred ehhcCCCCChHHH------------------HHHHHHHHHHHHHHHHHhhHHHH
Confidence 8888888888888 77777777777777777766543
No 272
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=82.33 E-value=37 Score=32.64 Aligned_cols=47 Identities=17% Similarity=0.144 Sum_probs=28.0
Q ss_pred hhhhh---hh-CchHHHHHHHHHHHHHHHHHHHhcc-HHHHHHHHHHHHHhh
Q psy12153 49 GLLAD---RF-GRRVIMLISFYGQGAISIAIVYNRS-FPVYLILRTMQGFFV 95 (236)
Q Consensus 49 g~l~D---r~-Grr~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~g~~~ 95 (236)
+.++| ++ ||.+-++++.++++++.+...+... .+.+..+-++.+++.
T Consensus 44 ~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~ 95 (704)
T TIGR01666 44 AALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGF 95 (704)
T ss_pred hccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence 44454 44 6777788888888877777765444 444444444444433
No 273
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=81.06 E-value=2 Score=40.49 Aligned_cols=54 Identities=9% Similarity=0.100 Sum_probs=40.8
Q ss_pred eeeeeeecCcchhHHHHHHHHH-HHHhhhhhhhhhhhhhC--chHHHHHHHHHHHHHHHH
Q psy12153 18 LLWHLYHHECKWNAAVVTLYFL-GVILGSIPAGLLADRFG--RRVIMLISFYGQGAISIA 74 (236)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~g~l~Dr~G--rr~~l~~~~~~~~~~~~~ 74 (236)
.++++ +..+.+++.+...+ +.+++.+++|+++||++ .|+.+.++.++..++.+.
T Consensus 359 ~~~g~---s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 359 NQYGI---SSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred HHcCC---cHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHH
Confidence 35777 88888988887776 67899999999999998 456666666666555443
No 274
>KOG3880|consensus
Probab=81.01 E-value=9.5 Score=32.92 Aligned_cols=70 Identities=14% Similarity=0.151 Sum_probs=56.0
Q ss_pred HHHHhccHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHH
Q psy12153 74 AIVYNRSFPVYLILRTMQGFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSL 153 (236)
Q Consensus 74 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~ 153 (236)
+..+.++.+..++.-+.-|+-.|..+...+--+.+-.++++| -.+++....+-.+|..++.+
T Consensus 335 ~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~r------------------Efamsavs~sDS~Gi~lA~~ 396 (409)
T KOG3880|consen 335 WYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVR------------------EFAMSAVSISDSIGIFLAGL 396 (409)
T ss_pred HHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHH------------------HHhHhhheecchhhHHHHHH
Confidence 334577888888888888988788887777777776777788 89999999999999999988
Q ss_pred HHHhcchh
Q psy12153 154 VSYWFPNW 161 (236)
Q Consensus 154 i~~~~~~w 161 (236)
++..+.+|
T Consensus 397 lalplh~~ 404 (409)
T KOG3880|consen 397 LALPLHNW 404 (409)
T ss_pred Hhccchhh
Confidence 88776555
No 275
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=79.45 E-value=29 Score=31.93 Aligned_cols=25 Identities=12% Similarity=-0.098 Sum_probs=19.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy12153 134 IGVAWVTEICWTVGLVMLSLVSYWF 158 (236)
Q Consensus 134 ~~~~~~~~~~~~~g~~l~~~i~~~~ 158 (236)
+.+......+.++|..++..+.-.+
T Consensus 153 ~~ASTcqtvG~~~Gyfls~tvFlal 177 (544)
T PF13000_consen 153 GYASTCQTVGQTAGYFLSFTVFLAL 177 (544)
T ss_pred chHHHHHHhHhhhhHHHHHHHHHhh
Confidence 7888888888888888877666555
No 276
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=78.56 E-value=9.2 Score=27.20 Aligned_cols=35 Identities=31% Similarity=0.340 Sum_probs=24.4
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhh-CchHHHHHH
Q psy12153 30 NAAVVTLYFLGVILGSIPAGLLADRF-GRRVIMLIS 64 (236)
Q Consensus 30 ~~~~~~~~~l~~~~~~~~~g~l~Dr~-Grr~~l~~~ 64 (236)
.++-.+.-+++.++.....||+.||| |-+|..++.
T Consensus 44 ~a~klssefIsGilVGa~iG~llD~~agTsPwglIv 79 (116)
T COG5336 44 QAFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIV 79 (116)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHH
Confidence 35555666777777777889999998 666654443
No 277
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=77.87 E-value=48 Score=31.87 Aligned_cols=43 Identities=23% Similarity=0.276 Sum_probs=26.9
Q ss_pred hhh-CchHHHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHhh
Q psy12153 53 DRF-GRRVIMLISFYGQGAISIAIVYNRSFP-VYLILRTMQGFFV 95 (236)
Q Consensus 53 Dr~-Grr~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~g~~~ 95 (236)
|++ ||.+-++++.++++++.+...+...++ .+..+-++.+++.
T Consensus 51 ~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~ 95 (701)
T TIGR01667 51 DRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGF 95 (701)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 344 677888888888888888777654444 4444444444443
No 278
>KOG4332|consensus
Probab=70.91 E-value=46 Score=28.42 Aligned_cols=88 Identities=20% Similarity=0.111 Sum_probs=59.0
Q ss_pred chhHHHHHHHHHHHHhhhhhhhhhhhhhCch--HHHHHHHHHHHHHHHHHHH----hc---cHHHHHHHHHHHHHhhhhh
Q psy12153 28 KWNAAVVTLYFLGVILGSIPAGLLADRFGRR--VIMLISFYGQGAISIAIVY----NR---SFPVYLILRTMQGFFVQGL 98 (236)
Q Consensus 28 ~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr--~~l~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~l~g~~~~~~ 98 (236)
.--|.+.+.+++..++|+-+...+..|=..| +.+.+..+...+...+... ++ +...-+++.++.-.+.|..
T Consensus 282 iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlf 361 (454)
T KOG4332|consen 282 IPHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLF 361 (454)
T ss_pred CCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhc
Confidence 3448888899999999988887777665443 3444444444333332222 22 2333455666677788899
Q ss_pred hHHHHHHHHhhcCcccc
Q psy12153 99 QNSTYTLLIELFPTRWR 115 (236)
Q Consensus 99 ~~~~~~~~~e~~~~~~r 115 (236)
+|....+=....|++.|
T Consensus 362 wPSimkmRsqyIPEear 378 (454)
T KOG4332|consen 362 WPSIMKMRSQYIPEEAR 378 (454)
T ss_pred chHHHHHHHhhCCHHHH
Confidence 99999999999999999
No 279
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=69.98 E-value=31 Score=26.30 Aligned_cols=81 Identities=16% Similarity=0.227 Sum_probs=47.9
Q ss_pred hhhhhhCchHHHHHHHHHHH-HHHHHHHH---------hccHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcCcccccccc
Q psy12153 50 LLADRFGRRVIMLISFYGQG-AISIAIVY---------NRSFPVYLILRTMQGFFVQGLQNSTYTLLIELFPTRWRIGVA 119 (236)
Q Consensus 50 ~l~Dr~Grr~~l~~~~~~~~-~~~~~~~~---------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~e~~~~~~r~~~~ 119 (236)
.++||.-||..+..+.-... ++.+...+ .+++..++....+.|+ +...+.|.+++-..++++.
T Consensus 56 ~Vs~RM~rRm~~~~GiP~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~---gllGisYGilSaSWD~~r~---- 128 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVGIPTALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGL---GLLGISYGILSASWDPERE---- 128 (153)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHH---HHHhhhhhhcccccCCCCC----
Confidence 46888888877665532221 11111111 2334444444444444 3445667778888888878
Q ss_pred chhhhhhccccccchhhHHHHHHHHHHHHHHH
Q psy12153 120 TYTLLIELFPTRWRIGVAWVTEICWTVGLVML 151 (236)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~ 151 (236)
|...|+-.+--+++.+.-
T Consensus 129 --------------GSllG~~e~~~N~~r~~~ 146 (153)
T PF11947_consen 129 --------------GSLLGWEEFKRNWGRMWE 146 (153)
T ss_pred --------------CCcccHHHHHHhHHHHHH
Confidence 888888888877776544
No 280
>KOG3880|consensus
Probab=69.77 E-value=7.5 Score=33.50 Aligned_cols=69 Identities=13% Similarity=0.085 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhh
Q psy12153 31 AAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQ 99 (236)
Q Consensus 31 ~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~ 99 (236)
+.+...-.+-..+-.+.+..+.||+.--.-..+..++.+.+.++.+++++.++-+.+-.+..++.|..-
T Consensus 65 g~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGE 133 (409)
T KOG3880|consen 65 GAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGE 133 (409)
T ss_pred chhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcce
Confidence 344444555556667777788888743222344456777888888888988888888777777766543
No 281
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=67.71 E-value=20 Score=24.99 Aligned_cols=30 Identities=30% Similarity=0.368 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhCchHH
Q psy12153 31 AAVVTLYFLGVILGSIPAGLLADRFGRRVI 60 (236)
Q Consensus 31 ~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~ 60 (236)
+.......++..++....+.+.|..|.+..
T Consensus 90 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 119 (141)
T TIGR00880 90 GLMSAGIALGPLLGPPLGGVLAQFLGWRAP 119 (141)
T ss_pred HHHHHhHHHHHHHhHHhHHHHhcccchHHH
Confidence 333344444444444444444444444333
No 282
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=66.60 E-value=2.4 Score=36.08 Aligned_cols=106 Identities=18% Similarity=0.117 Sum_probs=3.4
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhh-CchHHHHHH--HHHHHHHHHHHH----------HhccHHHHHHHHHHHHHhhhhhh
Q psy12153 33 VVTLYFLGVILGSIPAGLLADRF-GRRVIMLIS--FYGQGAISIAIV----------YNRSFPVYLILRTMQGFFVQGLQ 99 (236)
Q Consensus 33 ~~~~~~l~~~~~~~~~g~l~Dr~-Grr~~l~~~--~~~~~~~~~~~~----------~~~~~~~~~~~~~l~g~~~~~~~ 99 (236)
...+++++-.+|....++..-+- .+|.+.+.+ -++.....+.+. ..+|-+..++..++.|+..|-..
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~ 266 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLS 266 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchhh
Confidence 45567778788887776642111 244433321 111111111121 12344556677788899998888
Q ss_pred HHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHH
Q psy12153 100 NSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSY 156 (236)
Q Consensus 100 ~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~ 156 (236)
.....+..+..++++| ..+..+..+.-.+|..+|..++.
T Consensus 267 tl~m~~~p~~v~~~e~------------------e~aG~~~~~~L~~Gl~~Gs~ls~ 305 (309)
T PF01733_consen 267 TLAMMYAPKSVSPEER------------------ELAGSVMSFFLSFGLFIGSVLSF 305 (309)
T ss_dssp HHHH-----------------------------------------------------
T ss_pred hceeeeCCCcCCHHHH------------------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888888888 77777877777788777776654
No 283
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=60.01 E-value=1e+02 Score=25.77 Aligned_cols=18 Identities=28% Similarity=0.373 Sum_probs=8.4
Q ss_pred hHHHHHHHHHHhhcccch
Q psy12153 170 LPFVGFSLFYVWFIPESP 187 (236)
Q Consensus 170 ~~~~~~~~~~~~~~pet~ 187 (236)
+...+..++.+.+.|..|
T Consensus 83 lwy~~lsl~~~~l~p~r~ 100 (284)
T PF12805_consen 83 LWYLLLSLLWWPLRPYRP 100 (284)
T ss_pred HHHHHHHHHHHHHcCCCH
Confidence 333344444455555544
No 284
>KOG3810|consensus
Probab=56.83 E-value=45 Score=29.42 Aligned_cols=88 Identities=13% Similarity=0.046 Sum_probs=59.7
Q ss_pred chhHHHHHHHHHHHHhhhhhhhhhhhhhCchH--HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhhHHHHHH
Q psy12153 28 KWNAAVVTLYFLGVILGSIPAGLLADRFGRRV--IMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQNSTYTL 105 (236)
Q Consensus 28 ~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 105 (236)
...|..-.+..+.++++.+..|.+.-++.|.. .+.++.+..+...+++..+.+.+...+.-.+.+.......++...-
T Consensus 271 vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~ 350 (433)
T KOG3810|consen 271 VYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQ 350 (433)
T ss_pred hhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHH
Confidence 34466677778888899999999988887663 3445556666666667777887777776666665554555556666
Q ss_pred HHhhcCcccc
Q psy12153 106 LIELFPTRWR 115 (236)
Q Consensus 106 ~~e~~~~~~r 115 (236)
+++-...+.-
T Consensus 351 iA~nL~~e~~ 360 (433)
T KOG3810|consen 351 IARNLSSELF 360 (433)
T ss_pred HHHhhhhhhh
Confidence 6666655545
No 285
>KOG3097|consensus
Probab=56.35 E-value=25 Score=30.57 Aligned_cols=113 Identities=15% Similarity=0.035 Sum_probs=65.2
Q ss_pred HHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcCccccccc
Q psy12153 39 LGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIAIVYNRSFPVYLILRTMQGFFVQGLQNSTYTLLIELFPTRWRIGV 118 (236)
Q Consensus 39 l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~e~~~~~~r~~~ 118 (236)
+.-+..+++.+.+..++|-|.++.++.....+. +..-+-+.+..++..-.+.|++.+..++...+|+++.-..+.....
T Consensus 69 ~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~ly-iA~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~~~ 147 (390)
T KOG3097|consen 69 LSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALY-IAANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQRG 147 (390)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH-HHhhcchhHHhhccHHHhhccccccccccCcceecHHHHHHHHhhh
Confidence 334556666668899999999988876654332 2223345667777778888998887777666666555432211000
Q ss_pred cchhhhhhccc-cccchhhHHHHHHHHHHHHHHHHHHHH
Q psy12153 119 ATYTLLIELFP-TRWRIGVAWVTEICWTVGLVMLSLVSY 156 (236)
Q Consensus 119 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~l~~~i~~ 156 (236)
-..++.- -+..+-...+++.....|..+...+..
T Consensus 148 ----~q~~~~~~~~ffg~Ffii~~~~qv~gn~issli~~ 182 (390)
T KOG3097|consen 148 ----EQAGDGMKVRFFGEFFIIFQCAQVWGNLISSLIMT 182 (390)
T ss_pred ----hhccCceeeeehhHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000000 122255666667777777666655543
No 286
>KOG2325|consensus
Probab=55.53 E-value=5.8 Score=36.13 Aligned_cols=65 Identities=14% Similarity=0.000 Sum_probs=45.7
Q ss_pred HHHHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHH
Q psy12153 90 MQGFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFP---NWRDAEL 166 (236)
Q Consensus 90 l~g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~---~w~~~~~ 166 (236)
+.|.+.-.......++.+|...++++ +...+..+....++..++|.+..... |.|+.+.
T Consensus 397 ~~g~~~P~~~~~~~tlySkiLgp~~q------------------~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~ 458 (488)
T KOG2325|consen 397 VFGIAFPFISTALDTLYSKILGPRDQ------------------GTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWI 458 (488)
T ss_pred eeccccccccchHHHHHHHHhCCccc------------------cceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHH
Confidence 34444433444567788888888888 99999999999999999988877663 5566555
Q ss_pred HHHhHH
Q psy12153 167 VTSLPF 172 (236)
Q Consensus 167 i~~~~~ 172 (236)
+.....
T Consensus 459 ~~~~~~ 464 (488)
T KOG2325|consen 459 ILLCLL 464 (488)
T ss_pred HHHHHH
Confidence 554444
No 287
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=52.73 E-value=1.4e+02 Score=25.04 Aligned_cols=79 Identities=20% Similarity=0.404 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhh-hhCchHHHH----HHHHHHHHHHHHHHH-h--c--cHHHHHHHHHHHHHhhhhhhH
Q psy12153 31 AAVVTLYFLGVILGSIPAGLLAD-RFGRRVIML----ISFYGQGAISIAIVY-N--R--SFPVYLILRTMQGFFVQGLQN 100 (236)
Q Consensus 31 ~~~~~~~~l~~~~~~~~~g~l~D-r~Grr~~l~----~~~~~~~~~~~~~~~-~--~--~~~~~~~~~~l~g~~~~~~~~ 100 (236)
....-++..+..+|.+..|.... ++.||+.+. .+.++..++.+.... . + +...+.+.-++.|.+.=+.++
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 45566677777788888888876 456666543 334444444443211 1 1 345566677777776555555
Q ss_pred HHHHHHHhh
Q psy12153 101 STYTLLIEL 109 (236)
Q Consensus 101 ~~~~~~~e~ 109 (236)
+...+-.|.
T Consensus 224 ViL~lPhEy 232 (267)
T PF07672_consen 224 VILNLPHEY 232 (267)
T ss_pred HHhcChhhh
Confidence 554444444
No 288
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=52.08 E-value=1.7e+02 Score=25.97 Aligned_cols=84 Identities=15% Similarity=0.136 Sum_probs=49.9
Q ss_pred cCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHH----HHHHHHH---HHHHHHHH--hccHHHHHHHHHHHHHhh
Q psy12153 25 HECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIML----ISFYGQG---AISIAIVY--NRSFPVYLILRTMQGFFV 95 (236)
Q Consensus 25 ~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~----~~~~~~~---~~~~~~~~--~~~~~~~~~~~~l~g~~~ 95 (236)
++..+.+.+.+.|...+.+|+...-++.|---.-+.+. .+.++.. +..+.++. .++.+.+.++.++.|.-.
T Consensus 40 ~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~LV 119 (508)
T COG4262 40 GGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVLV 119 (508)
T ss_pred CceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 35566678888888888888888877666432221111 1211111 11111111 235567777888888888
Q ss_pred hhhhHHHHHHHHh
Q psy12153 96 QGLQNSTYTLLIE 108 (236)
Q Consensus 96 ~~~~~~~~~~~~e 108 (236)
|.-.|....+...
T Consensus 120 G~EiPL~mrml~~ 132 (508)
T COG4262 120 GAEIPLLMRMLQR 132 (508)
T ss_pred hcchHHHHHHHHH
Confidence 8888888777766
No 289
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=49.91 E-value=60 Score=25.56 Aligned_cols=23 Identities=30% Similarity=0.655 Sum_probs=19.0
Q ss_pred HHHHHHHHhhhhhhhhhhhhhCc
Q psy12153 35 TLYFLGVILGSIPAGLLADRFGR 57 (236)
Q Consensus 35 ~~~~l~~~~~~~~~g~l~Dr~Gr 57 (236)
.-|.++..+++.+.|++.||..+
T Consensus 89 gGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 89 GGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhc
Confidence 34777888899999999999875
No 290
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=48.61 E-value=96 Score=23.38 Aligned_cols=23 Identities=43% Similarity=0.700 Sum_probs=17.7
Q ss_pred HHHHHHHhhhhhhhhhhhhhCch
Q psy12153 36 LYFLGVILGSIPAGLLADRFGRR 58 (236)
Q Consensus 36 ~~~l~~~~~~~~~g~l~Dr~Grr 58 (236)
-|.++..+++.+.|++.+|..++
T Consensus 61 Gyl~gf~~~a~i~g~~~~~~~~~ 83 (148)
T PF02632_consen 61 GYLLGFPLAALIIGLLAERLKRS 83 (148)
T ss_pred hHHHHHHHHHHHHHHHHHhcccc
Confidence 46677778888888888888765
No 291
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=48.32 E-value=1.2e+02 Score=24.11 Aligned_cols=25 Identities=28% Similarity=0.274 Sum_probs=18.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy12153 134 IGVAWVTEICWTVGLVMLSLVSYWF 158 (236)
Q Consensus 134 ~~~~~~~~~~~~~g~~l~~~i~~~~ 158 (236)
+++.++.-.+..+|.++|.++..++
T Consensus 140 ~rA~~~~~~~L~~G~~lGs~l~~~l 164 (194)
T PF11833_consen 140 GRAFLWTLGGLVVGLILGSLLASWL 164 (194)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 6677777677777777777777666
No 292
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=44.74 E-value=82 Score=23.53 Aligned_cols=26 Identities=12% Similarity=0.103 Sum_probs=16.6
Q ss_pred hhccccccchhhHHHHHHHHHHHHHH
Q psy12153 125 IELFPTRWRIGVAWVTEICWTVGLVM 150 (236)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~g~~l 150 (236)
.||||...|...............-+
T Consensus 61 kdi~P~~~R~~i~~~~~~~~~~~k~~ 86 (137)
T PF04281_consen 61 KDIFPPSVRNWISSTVSTTSSAVKSL 86 (137)
T ss_pred hccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 67888888777777666544443333
No 293
>PRK10720 uracil transporter; Provisional
Probab=41.93 E-value=2.5e+02 Score=25.17 Aligned_cols=16 Identities=0% Similarity=-0.282 Sum_probs=9.2
Q ss_pred HHHHHHHhhcccchhH
Q psy12153 174 GFSLFYVWFIPESPLW 189 (236)
Q Consensus 174 ~~~~~~~~~~pet~~~ 189 (236)
+.++..-+++|...||
T Consensus 396 ~~ai~Lnlll~~~~~~ 411 (428)
T PRK10720 396 IVGIGLSLIFKLISKL 411 (428)
T ss_pred HHHHHHHHHhcccccc
Confidence 4556666667765443
No 294
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=41.69 E-value=81 Score=23.72 Aligned_cols=22 Identities=9% Similarity=-0.052 Sum_probs=14.6
Q ss_pred hhccccccchhhHHHHHHHHHH
Q psy12153 125 IELFPTRWRIGVAWVTEICWTV 146 (236)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~ 146 (236)
+||||+..|.............
T Consensus 59 kDm~Pp~~R~~i~~~~s~t~s~ 80 (145)
T TIGR00986 59 KDIVPPTTRGWIYHKYSTTTNF 80 (145)
T ss_pred HhhCCHHHHHHHHHHHHHHHHH
Confidence 7788888877766665554333
No 295
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=39.79 E-value=1.3e+02 Score=21.10 Aligned_cols=33 Identities=9% Similarity=0.019 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHH
Q psy12153 31 AAVVTLYFLGVILGSIPAGLLADRFGRRVIMLI 63 (236)
Q Consensus 31 ~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~ 63 (236)
+.+.....+..++|.+++-||=.++|-++.+.+
T Consensus 46 g~IG~~~v~pil~G~~lG~WLD~~~~t~~~~tl 78 (100)
T TIGR02230 46 GLIGWSVAIPTLLGVAVGIWLDRHYPSPFSWTL 78 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHH
Confidence 333333444444555555555556776554433
No 296
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=36.09 E-value=12 Score=31.76 Aligned_cols=24 Identities=33% Similarity=0.538 Sum_probs=0.0
Q ss_pred HHHHhhhhhhHHHHHHHHhhcCccc
Q psy12153 90 MQGFFVQGLQNSTYTLLIELFPTRW 114 (236)
Q Consensus 90 l~g~~~~~~~~~~~~~~~e~~~~~~ 114 (236)
+.|++.+......+.+.+. +|++.
T Consensus 6 ~~~~~~~~~q~s~~glas~-~p~~y 29 (309)
T PF01733_consen 6 LIGFANAVLQSSLFGLASL-FPPKY 29 (309)
T ss_dssp -------------------------
T ss_pred EEHhhhHHHhccHHHHHhc-CCHHH
Confidence 4555666666666666665 44433
No 297
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=33.48 E-value=3.6e+02 Score=24.32 Aligned_cols=26 Identities=19% Similarity=0.311 Sum_probs=14.6
Q ss_pred CCCCCccc-ccccCCcceeeeeeeecC
Q psy12153 1 MTGDVCDE-IDCVNGEPVLLWHLYHHE 26 (236)
Q Consensus 1 ~~~~~~~~-~~~~~~~~~~~~~~~~~~ 26 (236)
|+|+..++ ....++...++|+..+.+
T Consensus 233 F~G~fLP~~r~i~~~GF~A~W~v~~l~ 259 (430)
T PF06123_consen 233 FTGAFLPEEREITDSGFSAQWKVSHLA 259 (430)
T ss_pred CCCccCCCCCccCCCCceeEeeehhhc
Confidence 35554444 333456777778775543
No 298
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=32.81 E-value=2.9e+02 Score=25.13 Aligned_cols=49 Identities=12% Similarity=0.213 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHHHHhcchhHHHHHHHHhH-HHHHHHHHHhhcccch
Q psy12153 139 VTEICWTVGLVMLSLVSYWFPNWRDAELVTSLP-FVGFSLFYVWFIPESP 187 (236)
Q Consensus 139 ~~~~~~~~g~~l~~~i~~~~~~w~~~~~i~~~~-~~~~~~~~~~~~pet~ 187 (236)
...+...+|....|-+...++.|-..+...++. +.+.+++.-+++|+-+
T Consensus 388 Avsl~~Gig~~~~p~~~~~~p~~~~~l~~sGia~g~i~AIvLNlll~~~~ 437 (451)
T COG2233 388 AVSLGLGIGVGAVPEVFLQLPAWLRPLLSSGIALGTLTAIVLNLLLPGEK 437 (451)
T ss_pred hHHHHhCcchhcCchhhhhCcHHHHHHHhccHHHHHHHHHHHHHhccccc
Confidence 334444444344444444455564444444433 3355667777788643
No 299
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=31.73 E-value=70 Score=22.58 Aligned_cols=28 Identities=11% Similarity=0.230 Sum_probs=20.4
Q ss_pred hhHHHHHHHHhHHHHHHHHHHhhcccch
Q psy12153 160 NWRDAELVTSLPFVGFSLFYVWFIPESP 187 (236)
Q Consensus 160 ~w~~~~~i~~~~~~~~~~~~~~~~pet~ 187 (236)
+|+.++++...++++++.+.+.+.|++.
T Consensus 58 ~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 58 GWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 6888887766666566777777778874
No 300
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=31.06 E-value=51 Score=27.35 Aligned_cols=53 Identities=13% Similarity=-0.066 Sum_probs=24.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhcc--------hhHHHHHHHHhHHHHHHHHHHhhcccc
Q psy12153 134 IGVAWVTEICWTVGLVMLSLVSYWFP--------NWRDAELVTSLPFVGFSLFYVWFIPES 186 (236)
Q Consensus 134 ~~~~~~~~~~~~~g~~l~~~i~~~~~--------~w~~~~~i~~~~~~~~~~~~~~~~pet 186 (236)
....++-.+.|+..+.+.+...+.+. ..+...-..++..+++....+.+++.+
T Consensus 78 ~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~ 138 (254)
T PF07857_consen 78 TIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSE 138 (254)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCC
Confidence 34455555566666666555544331 112223333444435555555555443
No 301
>COG1575 MenA 1,4-dihydroxy-2-naphthoate octaprenyltransferase [Coenzyme metabolism]
Probab=30.83 E-value=3.4e+02 Score=23.21 Aligned_cols=65 Identities=11% Similarity=0.103 Sum_probs=36.1
Q ss_pred hhhHHHHHHHHhhcCcccccc---ccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcchh
Q psy12153 97 GLQNSTYTLLIELFPTRWRIG---VATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWFPNW 161 (236)
Q Consensus 97 ~~~~~~~~~~~e~~~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~~~w 161 (236)
........+..|.++-++-.| ..-......+.+...+.+..-...+..-.|..+.........+|
T Consensus 54 ~~iq~~vN~~NdY~D~~KG~D~~g~~~~~~~g~I~~~~~k~~~~l~l~l~~~~g~~llg~~~~~~s~~ 121 (303)
T COG1575 54 ILLQILVNLANDYFDYKKGTDTHGPDRLKQSGLIVRQSMKPALILSLALFLLAGLALLGVILAALSDW 121 (303)
T ss_pred HHHHHHHHHHHhhhhhhcCCCCCCCccccccceeecccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 344445566777776554433 22345557777887776665555555555555554444443344
No 302
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=30.18 E-value=3.6e+02 Score=23.27 Aligned_cols=17 Identities=18% Similarity=0.282 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHHHHhcc
Q psy12153 143 CWTVGLVMLSLVSYWFP 159 (236)
Q Consensus 143 ~~~~g~~l~~~i~~~~~ 159 (236)
..+.|.+--|++.....
T Consensus 103 ~~N~~~lglpi~~~l~g 119 (385)
T PF03547_consen 103 FGNTGFLGLPILQALFG 119 (385)
T ss_pred CCcchhhHHHHHHHHhc
Confidence 44555555566655554
No 303
>PRK14229 camphor resistance protein CrcB; Provisional
Probab=29.15 E-value=2.1e+02 Score=20.24 Aligned_cols=24 Identities=21% Similarity=-0.090 Sum_probs=14.1
Q ss_pred HHHHHhhhhhhHHHHHHHHhhcCc
Q psy12153 89 TMQGFFVQGLQNSTYTLLIELFPT 112 (236)
Q Consensus 89 ~l~g~~~~~~~~~~~~~~~e~~~~ 112 (236)
.+.+.|..+.+.+..++..|...-
T Consensus 57 ~~l~tGf~GgfTTFSTf~~e~~~l 80 (108)
T PRK14229 57 AILATGFCGGLTTFSTLNDELQRL 80 (108)
T ss_pred HHHHhhHccccccHHHHHHHHHHH
Confidence 334444445566667777777753
No 304
>PRK02237 hypothetical protein; Provisional
Probab=27.53 E-value=1.5e+02 Score=21.16 Aligned_cols=44 Identities=14% Similarity=-0.203 Sum_probs=25.5
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHH
Q psy12153 30 NAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISI 73 (236)
Q Consensus 30 ~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~ 73 (236)
.|-.-..|.-.+++.++.+++..|+.-+-+-=.+|..++.++..
T Consensus 58 ~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~ 101 (109)
T PRK02237 58 FGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMA 101 (109)
T ss_pred hhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHH
Confidence 45555666666667777777777776544444444444444443
No 305
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=26.89 E-value=1.1e+02 Score=21.73 Aligned_cols=47 Identities=17% Similarity=-0.135 Sum_probs=29.8
Q ss_pred chhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHHHHHHHHHHHHHH
Q psy12153 28 KWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIMLISFYGQGAISIA 74 (236)
Q Consensus 28 ~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~ 74 (236)
...|-.-..|.-.+++.++.+++..|+.-+-+-=.++..++.++..+
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~i 100 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAI 100 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHh
Confidence 44455566666677778888888888876555545555555554443
No 306
>PRK03612 spermidine synthase; Provisional
Probab=26.79 E-value=5.1e+02 Score=23.90 Aligned_cols=52 Identities=8% Similarity=-0.079 Sum_probs=26.5
Q ss_pred HHHHHHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc
Q psy12153 88 RTMQGFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF 158 (236)
Q Consensus 88 ~~l~g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~ 158 (236)
.++.++..|...|....+..+.... +- +...+-......+|.++|.++.+++
T Consensus 117 ~~~~~~l~G~~~Pl~~~~~~~~~~~-~~------------------g~~~g~ly~~ntlGa~~G~l~~~~v 168 (521)
T PRK03612 117 VLLIGLLIGMEIPLLMRILQRIRDQ-HL------------------GHNVATVLAADYLGALVGGLAFPFL 168 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccc-ch------------------hhhhhhhHhHHhHHHHHHHHHHHHH
Confidence 3445566666666665555443321 11 3334555555555666665555544
No 307
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=26.65 E-value=5.7e+02 Score=24.43 Aligned_cols=54 Identities=4% Similarity=-0.058 Sum_probs=37.5
Q ss_pred HHHHHHHhhhhhhHHHHHHHHhhcCccccccccchhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhc
Q psy12153 87 LRTMQGFFVQGLQNSTYTLLIELFPTRWRIGVATYTLLIELFPTRWRIGVAWVTEICWTVGLVMLSLVSYWF 158 (236)
Q Consensus 87 ~~~l~g~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~i~~~~ 158 (236)
-.++.+++.........-...+-.|++-| ..+.+++.+..++|.++...+...-
T Consensus 571 q~~~~~~~e~~~~~~~~e~~~~~~p~~mk------------------s~~~a~~~~~~~~g~~~~~~~~~~~ 624 (654)
T TIGR00926 571 QYVILTAGEVLFSVTGLEFSYSQAPPNMK------------------SVLQALWLLTVAIGNLIVVVIAEFE 624 (654)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHhCcHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 33455565544444445555666777878 8888888889999999887776654
No 308
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=25.59 E-value=2.2e+02 Score=19.28 Aligned_cols=40 Identities=20% Similarity=0.093 Sum_probs=25.4
Q ss_pred HHhhhhhhhhhhhhhCc-------hHHHHHHHHHHHHHHHHHHHhcc
Q psy12153 41 VILGSIPAGLLADRFGR-------RVIMLISFYGQGAISIAIVYNRS 80 (236)
Q Consensus 41 ~~~~~~~~g~l~Dr~Gr-------r~~l~~~~~~~~~~~~~~~~~~~ 80 (236)
...+.+..+++.+|.-+ ++.+..+.++...+.+++++.++
T Consensus 31 ~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS 77 (86)
T PF10785_consen 31 ATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRS 77 (86)
T ss_pred HHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 34455666777777654 67777777766666666665443
No 309
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=25.06 E-value=3.1e+02 Score=20.76 Aligned_cols=41 Identities=15% Similarity=0.092 Sum_probs=28.5
Q ss_pred eeeeeecCcchhHHHHHHHHHHHHhhhhhhhhhhhhhCchHHHH
Q psy12153 19 LWHLYHHECKWNAAVVTLYFLGVILGSIPAGLLADRFGRRVIML 62 (236)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~Dr~Grr~~l~ 62 (236)
+.++ +....-....+.++.-.++.+++.+++|+.++-..+.
T Consensus 66 eiGi---~EkslL~sA~LvYi~PL~~l~v~~~La~~L~~~e~~~ 106 (150)
T COG3086 66 ELGI---EEKSLLKSALLVYIFPLVGLFLGAILAQYLFFSELIV 106 (150)
T ss_pred EEcc---CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHH
Confidence 4556 4444455556667777788888999999998766543
No 310
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=23.66 E-value=3.6e+02 Score=21.12 Aligned_cols=24 Identities=8% Similarity=0.101 Sum_probs=12.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhc
Q psy12153 135 GVAWVTEICWTVGLVMLSLVSYWF 158 (236)
Q Consensus 135 ~~~~~~~~~~~~g~~l~~~i~~~~ 158 (236)
......-.++.+|.+++..+...+
T Consensus 166 ~~~~~~i~~f~~Ga~~ga~l~~~~ 189 (209)
T PF06912_consen 166 LRYLLIILSFFIGAILGALLYRRL 189 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444555556666665555554
No 311
>COG4769 Predicted membrane protein [Function unknown]
Probab=23.63 E-value=1.1e+02 Score=23.75 Aligned_cols=13 Identities=15% Similarity=0.148 Sum_probs=5.5
Q ss_pred hhhhhhhhhCchH
Q psy12153 47 PAGLLADRFGRRV 59 (236)
Q Consensus 47 ~~g~l~Dr~Grr~ 59 (236)
..-++..++|+|.
T Consensus 92 L~m~~l~~f~~k~ 104 (181)
T COG4769 92 LFMYFLYQFGPKY 104 (181)
T ss_pred HHHHHHHHcCCce
Confidence 3334444444443
No 312
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=21.85 E-value=52 Score=24.07 Aligned_cols=11 Identities=9% Similarity=-0.142 Sum_probs=4.9
Q ss_pred HHHHHHHHhHH
Q psy12153 162 RDAELVTSLPF 172 (236)
Q Consensus 162 ~~~~~i~~~~~ 172 (236)
||+++++.++.
T Consensus 1 RW~l~~iii~~ 11 (130)
T PF12273_consen 1 RWVLFAIIIVA 11 (130)
T ss_pred CeeeHHHHHHH
Confidence 34444444443
No 313
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=21.55 E-value=31 Score=31.95 Aligned_cols=55 Identities=15% Similarity=0.160 Sum_probs=0.0
Q ss_pred ceeeeeeeecCcchhHHHHHHHHH-HHHhhhhhhhhhhhhh--CchHHHHHHHHHHHHHHH
Q psy12153 16 PVLLWHLYHHECKWNAAVVTLYFL-GVILGSIPAGLLADRF--GRRVIMLISFYGQGAISI 73 (236)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~g~l~Dr~--Grr~~l~~~~~~~~~~~~ 73 (236)
+..+|++ +..+.+++..+..+ +.++|.+++|++..|+ +.|..+.+..+...++.+
T Consensus 332 lE~QF~~---sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~ 389 (539)
T PF03137_consen 332 LESQFGL---SASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVI 389 (539)
T ss_dssp -------------------------------------------------------------
T ss_pred HHHHhCC---CHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHH
Confidence 3467888 88888888766665 6688999999999988 455665555555444433
No 314
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=21.36 E-value=3e+02 Score=19.32 Aligned_cols=23 Identities=9% Similarity=0.106 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcc
Q psy12153 137 AWVTEICWTVGLVMLSLVSYWFP 159 (236)
Q Consensus 137 ~~~~~~~~~~g~~l~~~i~~~~~ 159 (236)
++.......+..++|..++.++.
T Consensus 45 ~g~IG~~~v~pil~G~~lG~WLD 67 (100)
T TIGR02230 45 FGLIGWSVAIPTLLGVAVGIWLD 67 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445555555666666666664
No 315
>COG1422 Predicted membrane protein [Function unknown]
Probab=20.65 E-value=2.5e+02 Score=22.42 Aligned_cols=10 Identities=30% Similarity=0.271 Sum_probs=4.4
Q ss_pred HHHHHHHHHH
Q psy12153 147 GLVMLSLVSY 156 (236)
Q Consensus 147 g~~l~~~i~~ 156 (236)
...++|.+..
T Consensus 34 n~~f~P~i~~ 43 (201)
T COG1422 34 NVVFGPLLSP 43 (201)
T ss_pred HHHHhhhccc
Confidence 3444444444
Done!