RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy12154
         (214 letters)



>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid
           dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
          Length = 285

 Score = 30.2 bits (67), Expect = 0.17
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 4/45 (8%)

Query: 67  LKAITLPSIPKLRYFTNDTLLDVLF--YTSPVYCERIITAVAKEM 109
           L A+  P  P LRYFT +  L +L      P      +TA+ +E+
Sbjct: 241 LTALRAPK-PTLRYFTTERFLPLLRMRLDDPSG-SNYVTAMHREV 283


>d1q2ha_ a.34.4.1 (A:) Adapter protein APS, dimerisation domain
           {Human (Homo sapiens) [TaxId: 9606]}
          Length = 63

 Score = 25.6 bits (56), Expect = 1.3
 Identities = 9/32 (28%), Positives = 14/32 (43%)

Query: 97  YCERIITAVAKEMNRLYAIFLARNPTYEGGVS 128
           +CE    A A +    +  FL  NP Y+   +
Sbjct: 6   FCELHAQAAAVDFAHKFCRFLRDNPAYDTPDA 37


>d1y5ia2 c.81.1.1 (A:1-1074) Respiratory nitrate reductase 1 alpha
           chain {Escherichia coli [TaxId: 562]}
          Length = 1074

 Score = 26.3 bits (57), Expect = 3.6
 Identities = 9/61 (14%), Positives = 16/61 (26%), Gaps = 4/61 (6%)

Query: 10  KFRPVVEVVDDFRSISLTLTASHFKSAADLGTLGRVEMLPISWHEALHSEESGIDKKLKA 69
            +R    +  D      ++     K+ +     GR   +  SW E        I      
Sbjct: 120 MWREAKALHSDPVEAWASIIEDADKAKSFKQARGRGGFVRSSWQEVNEL----IAASNVY 175

Query: 70  I 70
            
Sbjct: 176 T 176


>gi|115385463|ref|XP_001209278.1|(7-278:285) hypothetical protein
           ATEG_09976 [Aspergillus terreus NIH2624] 
           gi|114187725|gb|EAU29425.1| hypothetical protein
           ATEG_09976 [Aspergillus terreus NIH2624]  E=1e-100
           s/c=1.35 id=66% cov=100%
          Length = 272

 Score = 25.4 bits (55), Expect = 6.3
 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 6/51 (11%)

Query: 103 TAVAKEMNRLYAIFLARNPTYEGGVSVGGHSLG----SLILFDLLSHQKPV 149
           T V   + +     +A NP YE  + V GHSLG    +L   DL +   P 
Sbjct: 117 TNVRDSVMKHLKETMAANPDYE--LVVVGHSLGAAVATLAAADLRTKGYPS 165


>d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP)
           {Escherichia coli [TaxId: 562]}
          Length = 796

 Score = 25.0 bits (54), Expect = 9.3
 Identities = 5/13 (38%), Positives = 6/13 (46%)

Query: 28  LTASHFKSAADLG 40
           L A    S A +G
Sbjct: 118 LAACFLDSMATVG 130


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.320    0.137    0.403 

Gapped
Lambda     K      H
   0.267   0.0552    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 779,216
Number of extensions: 33786
Number of successful extensions: 62
Number of sequences better than 10.0: 1
Number of HSP's gapped: 62
Number of HSP's successfully gapped: 8
Length of query: 214
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 132
Effective length of database: 1,281,736
Effective search space: 169189152
Effective search space used: 169189152
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (23.8 bits)