BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12155
(78 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O94830|DDHD2_HUMAN Phospholipase DDHD2 OS=Homo sapiens GN=DDHD2 PE=1 SV=2
Length = 711
Score = 114 bits (285), Expect = 2e-25, Method: Composition-based stats.
Identities = 47/74 (63%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
Query: 1 MFFAFGSPVGMFVNVRGIDVLGEEFEFPTCPKFYNIFHPFDPVAYRIEPLIVPAMEHVRP 60
+FFAFGSP+GMF+ VRG+ + + FPTC F+NI+HPFDPVAYRIEP++VP +E P
Sbjct: 501 IFFAFGSPIGMFLTVRGLKRIDPNYRFPTCKGFFNIYHPFDPVAYRIEPMVVPGVE-FEP 559
Query: 61 VQVPHHKGRKRMHL 74
+ +PHHKGRKRMHL
Sbjct: 560 MLIPHHKGRKRMHL 573
>sp|Q80Y98|DDHD2_MOUSE Phospholipase DDHD2 OS=Mus musculus GN=Ddhd2 PE=1 SV=3
Length = 699
Score = 113 bits (282), Expect = 4e-25, Method: Composition-based stats.
Identities = 46/74 (62%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
Query: 1 MFFAFGSPVGMFVNVRGIDVLGEEFEFPTCPKFYNIFHPFDPVAYRIEPLIVPAMEHVRP 60
+FFAFGSP+GMF+ VRG+ + ++FPTC F+NI+HPFDPVAYRIEP++ P +E P
Sbjct: 490 IFFAFGSPIGMFLTVRGLRRIDPNYKFPTCKGFFNIYHPFDPVAYRIEPMVAPGIE-FEP 548
Query: 61 VQVPHHKGRKRMHL 74
+ +PHHKGRKRMHL
Sbjct: 549 MLIPHHKGRKRMHL 562
>sp|Q9Y6Y8|S23IP_HUMAN SEC23-interacting protein OS=Homo sapiens GN=SEC23IP PE=1 SV=1
Length = 1000
Score = 103 bits (258), Expect = 2e-22, Method: Composition-based stats.
Identities = 43/77 (55%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
Query: 1 MFFAFGSPVGMFVNVRGIDVLGEEFEFPTCPKFYNIFHPFDPVAYRIEPLIVPAMEHVRP 60
+FFA GSP+ MF+ +RG+D + E + PTC F+NI+HP DPVAYR+EP+IVP ++ ++
Sbjct: 785 IFFALGSPIAMFLTIRGVDRIDENYSLPTCKGFFNIYHPLDPVAYRLEPMIVPDLD-LKA 843
Query: 61 VQVPHHKGRKRMHLGRK 77
V +PHHKGRKR+HL K
Sbjct: 844 VLIPHHKGRKRLHLELK 860
>sp|Q6NZC7|S23IP_MOUSE SEC23-interacting protein OS=Mus musculus GN=Sec23ip PE=1 SV=2
Length = 998
Score = 101 bits (252), Expect = 1e-21, Method: Composition-based stats.
Identities = 42/77 (54%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Query: 1 MFFAFGSPVGMFVNVRGIDVLGEEFEFPTCPKFYNIFHPFDPVAYRIEPLIVPAMEHVRP 60
+FFA GSP+GM + +RG+ + E++ PTC F+NI+HP DPVAYR+EP+I P ++ ++
Sbjct: 783 IFFALGSPIGMLLTIRGVARIDEKYRLPTCKGFFNIYHPLDPVAYRLEPMIAPDLD-LKA 841
Query: 61 VQVPHHKGRKRMHLGRK 77
V VPHHKGRKR+HL K
Sbjct: 842 VLVPHHKGRKRLHLELK 858
>sp|P87109|YDK2_SCHPO Probable phospholipase C20G8.02, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC20G8.02 PE=3 SV=1
Length = 757
Score = 65.1 bits (157), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 19/85 (22%)
Query: 2 FFAFGSPVGMFVNVRGIDVLG---------------EEFE----FPTCPKFYNIFHPFDP 42
FFA GSP+G+F + G + G + F+ +C FYNIFHP DP
Sbjct: 554 FFALGSPLGLFQMLNGKKIAGPIPKTNLTRSLSYSEQSFDSGVSILSCQNFYNIFHPTDP 613
Query: 43 VAYRIEPLIVPAMEHVRPVQVPHHK 67
++YR+EPL+V M ++P ++ H +
Sbjct: 614 ISYRVEPLVVKQMARLKPQKISHFR 638
>sp|O46606|DDHD1_BOVIN Phospholipase DDHD1 OS=Bos taurus GN=DDHD1 PE=1 SV=1
Length = 875
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
Query: 2 FFAFGSPVGMFVNVRGI---DVLGEEFEFP--TCPKFYNIFHPFDPVAYRIEPLIVPAME 56
FF GSP+ +F+ +RGI + ++ P C + NIFHP DPVAYR+EPLI+
Sbjct: 621 FFCMGSPLAVFLALRGIRPGNTGSQDHILPREICNRLLNIFHPTDPVAYRLEPLILKHYS 680
Query: 57 HVRPVQV 63
++ PVQ+
Sbjct: 681 NISPVQI 687
>sp|Q80YA3|DDHD1_MOUSE Phospholipase DDHD1 OS=Mus musculus GN=Ddhd1 PE=2 SV=1
Length = 547
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
Query: 2 FFAFGSPVGMFVNVRGI---DVLGEEFEFP--TCPKFYNIFHPFDPVAYRIEPLIVPAME 56
FF GSP+ +F+ +RGI + ++ P C + NIFHP DPVAYR+EPLI+
Sbjct: 265 FFCMGSPLAVFLALRGIRPGNSGSQDHILPREICNRLLNIFHPTDPVAYRLEPLILKHYS 324
Query: 57 HVRPVQV 63
++ PVQ+
Sbjct: 325 NISPVQI 331
>sp|Q8NEL9|DDHD1_HUMAN Phospholipase DDHD1 OS=Homo sapiens GN=DDHD1 PE=1 SV=2
Length = 900
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
Query: 2 FFAFGSPVGMFVNVRGI---DVLGEEFEFP--TCPKFYNIFHPFDPVAYRIEPLIVPAME 56
FF GSP+ +F+ +RGI + ++ P C + NIFHP DPVAYR+EPLI+
Sbjct: 618 FFCMGSPLAVFLALRGIRPGNTGSQDHILPREICNRLLNIFHPTDPVAYRLEPLILKHYS 677
Query: 57 HVRPVQV 63
++ PVQ+
Sbjct: 678 NISPVQI 684
>sp|P43125|RDGB_DROME Protein retinal degeneration B OS=Drosophila melanogaster GN=rdgB
PE=1 SV=2
Length = 1259
Score = 58.9 bits (141), Expect = 9e-09, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 2 FFAFGSPVGMFVNVRGIDVLGEEFEFPTCPKFYNIFHPFDPVAYRIEPLIVPAMEHVRPV 61
FF FGSP+ + + R + P C + YN+FHP DP+A R+EPL+ + PV
Sbjct: 737 FFMFGSPLSVVLAARKLHDAKAALPRPNCHQVYNLFHPTDPIASRLEPLLSARFSILAPV 796
Query: 62 QVPHH 66
VP +
Sbjct: 797 NVPRY 801
>sp|O35954|PITM1_MOUSE Membrane-associated phosphatidylinositol transfer protein 1 OS=Mus
musculus GN=Pitpnm1 PE=1 SV=1
Length = 1243
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 2 FFAFGSPVGMFVNVRGIDVLGEEFE--FPTCPKFYNIFHPFDPVAYRIEPLIVPAMEHVR 59
FF FGSP+G+ + +R + E P C + YN+FH DP A R+EPL+ P + +
Sbjct: 692 FFLFGSPLGLVLALRKTVMPALEVAQLRPACEQIYNLFHAADPCASRLEPLLAPKFQAIA 751
Query: 60 PVQVPHHK 67
P+ VP ++
Sbjct: 752 PLAVPRYQ 759
>sp|Q5U2N3|PITM1_RAT Membrane-associated phosphatidylinositol transfer protein 1
OS=Rattus norvegicus GN=Pitpnm1 PE=2 SV=1
Length = 1242
Score = 58.2 bits (139), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 2 FFAFGSPVGMFVNVRGIDVLGEEFE--FPTCPKFYNIFHPFDPVAYRIEPLIVPAMEHVR 59
FF FGSP+G+ + +R + E P C + YN+FH DP A R+EPL+ P + +
Sbjct: 691 FFLFGSPLGLVLALRKTVMPALEVAQMRPACEQIYNLFHAADPCASRLEPLLAPKFQAIA 750
Query: 60 PVQVPHHK 67
P+ VP ++
Sbjct: 751 PLAVPRYQ 758
>sp|O00562|PITM1_HUMAN Membrane-associated phosphatidylinositol transfer protein 1 OS=Homo
sapiens GN=PITPNM1 PE=1 SV=4
Length = 1244
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 2 FFAFGSPVGMFVNVRG--IDVLGEEFEFPTCPKFYNIFHPFDPVAYRIEPLIVPAMEHVR 59
FF FGSP+G+ + +R + L P C + YN+FH DP A R+EPL+ P + +
Sbjct: 693 FFLFGSPLGLVLALRKTVMPALEAAQMRPACEQIYNLFHAADPCASRLEPLLAPKFQAIA 752
Query: 60 PVQVPHHK 67
P+ VP ++
Sbjct: 753 PLTVPRYQ 760
>sp|Q3UHE1|PITM3_MOUSE Membrane-associated phosphatidylinositol transfer protein 3 OS=Mus
musculus GN=Pitpnm3 PE=1 SV=2
Length = 974
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 2 FFAFGSPVGMFVNVRGIDVLG-EEFEF-PTCPKFYNIFHPFDPVAYRIEPLIVPAMEHVR 59
FF FGSP+G+ + +R + G + F+ P C + Y+ FH DP A R+EPL+ P V
Sbjct: 397 FFLFGSPLGLVLAMRRTVLPGIDGFQMRPACSQVYSFFHCADPSASRLEPLLEPKFHLVP 456
Query: 60 PVQVPHHK 67
PV VP ++
Sbjct: 457 PVSVPRYQ 464
>sp|Q9BZ71|PITM3_HUMAN Membrane-associated phosphatidylinositol transfer protein 3 OS=Homo
sapiens GN=PITPNM3 PE=1 SV=2
Length = 974
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 2 FFAFGSPVGMFVNVRGIDVLG-EEFEF-PTCPKFYNIFHPFDPVAYRIEPLIVPAMEHVR 59
FF FGSP+G+ + +R + G + F+ P C + Y+ FH DP A R+EPL+ P V
Sbjct: 397 FFLFGSPLGLVLAMRRTVLPGLDGFQVRPACSQVYSFFHCADPSASRLEPLLEPKFHLVP 456
Query: 60 PVQVPHHK 67
PV VP ++
Sbjct: 457 PVSVPRYQ 464
>sp|Q12204|YOR22_YEAST Probable phospholipase YOR022C, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YOR022C PE=1
SV=1
Length = 715
Score = 52.4 bits (124), Expect = 8e-07, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 13/76 (17%)
Query: 2 FFAFGSPVGMFVNVRGIDVLGEEFEFPT------------CPKFYNIFHPFDPVAYRIEP 49
F GSP+G+ ++ + G+ EFP C YN++H DP++YR+EP
Sbjct: 526 LFFIGSPIGLLKLIQRTKI-GDRPEFPNDLERKLTVQRPQCKDIYNVYHVCDPISYRMEP 584
Query: 50 LIVPAMEHVRPVQVPH 65
L+ M H +PH
Sbjct: 585 LVSKEMAHYEQTYLPH 600
>sp|Q6ZPQ6|PITM2_MOUSE Membrane-associated phosphatidylinositol transfer protein 2 OS=Mus
musculus GN=Pitpnm2 PE=1 SV=2
Length = 1335
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 2 FFAFGSPVGMFVNVRGIDVLG-EEFEF-PTCPKFYNIFHPFDPVAYRIEPLIVPAMEHVR 59
F FG P+G+ + +R + + F+ P C + YN+FHP DP A R+EPL+ +
Sbjct: 708 LFLFGCPLGLVLALRKTVIPSLDVFQLRPACQQVYNLFHPADPSASRLEPLLERRFHSLP 767
Query: 60 PVQVPHHK 67
P +P ++
Sbjct: 768 PFSIPRYQ 775
>sp|Q9BZ72|PITM2_HUMAN Membrane-associated phosphatidylinositol transfer protein 2 OS=Homo
sapiens GN=PITPNM2 PE=1 SV=1
Length = 1349
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 2 FFAFGSPVGMFVNVRGIDVLG-EEFEF-PTCPKFYNIFHPFDPVAYRIEPLIVPAMEHVR 59
F FG P+G+ + +R + + F+ P C + YN+FHP DP A R+EPL+ +
Sbjct: 722 LFLFGCPLGLVLALRKTVIPALDVFQLRPACQQVYNLFHPADPSASRLEPLLERRFHALP 781
Query: 60 PVQVPHHK 67
P VP ++
Sbjct: 782 PFSVPRYQ 789
>sp|Q04BV6|GATB_LACDB Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
OS=Lactobacillus delbrueckii subsp. bulgaricus (strain
ATCC BAA-365) GN=gatB PE=3 SV=1
Length = 476
Score = 29.3 bits (64), Expect = 6.7, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 35 NIFHPFDPVAYRIEPLIVPAMEHVRPVQVPHHKGRKRMHLGRKH 78
N F+P +P AY+I P E+ V+V H +K++H+ H
Sbjct: 80 NYFYPDNPKAYQITQFFKPLAENGY-VEVEVHGKKKKIHIHEMH 122
>sp|Q1GBF3|GATB_LACDA Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
OS=Lactobacillus delbrueckii subsp. bulgaricus (strain
ATCC 11842 / DSM 20081) GN=gatB PE=3 SV=1
Length = 476
Score = 29.3 bits (64), Expect = 6.7, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 35 NIFHPFDPVAYRIEPLIVPAMEHVRPVQVPHHKGRKRMHLGRKH 78
N F+P +P AY+I P E+ V+V H +K++H+ H
Sbjct: 80 NYFYPDNPKAYQITQFFKPLAENGY-VEVEVHGKKKKIHIHEMH 122
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.331 0.149 0.496
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,449,339
Number of Sequences: 539616
Number of extensions: 1291386
Number of successful extensions: 3008
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2978
Number of HSP's gapped (non-prelim): 19
length of query: 78
length of database: 191,569,459
effective HSP length: 49
effective length of query: 29
effective length of database: 165,128,275
effective search space: 4788719975
effective search space used: 4788719975
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 55 (25.8 bits)