Query psy12155
Match_columns 78
No_of_seqs 101 out of 297
Neff 5.5
Searched_HMMs 13730
Date Fri Aug 16 20:08:30 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12155.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/12155hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1e4va2 g.41.2.1 (A:122-156) M 44.3 3.4 0.00024 19.8 0.7 13 26-38 4-16 (35)
2 d2ak3a2 g.41.2.1 (A:125-161) M 42.3 3.8 0.00027 19.9 0.7 14 25-38 3-16 (37)
3 d1akya2 g.41.2.1 (A:131-168) M 40.5 5.2 0.00038 19.5 1.1 14 25-38 3-16 (38)
4 d1s3ga2 g.41.2.1 (A:126-160) M 35.5 5.6 0.00041 19.0 0.7 14 25-38 3-16 (35)
5 d1zina2 g.41.2.1 (A:126-160) M 29.6 8.1 0.00059 18.4 0.7 14 25-38 3-16 (35)
6 d1dwka2 d.72.1.1 (A:87-156) Cy 23.3 6.2 0.00045 21.8 -0.5 11 39-49 3-13 (70)
7 d1ak2a2 g.41.2.1 (A:147-176) M 22.3 14 0.001 17.0 0.8 9 28-36 1-9 (30)
8 d1g94a2 c.1.8.1 (A:1-354) Bact 18.7 15 0.0011 23.6 0.6 16 36-51 46-61 (354)
9 d1edza1 c.2.1.7 (A:149-319) Me 14.5 20 0.0014 22.2 0.3 16 4-19 40-55 (171)
10 d1vbka1 c.26.2.6 (A:176-307) H 13.9 24 0.0017 20.9 0.6 13 7-19 16-28 (132)
No 1
>d1e4va2 g.41.2.1 (A:122-156) Microbial and mitochondrial ADK, insert "zinc finger" domain {Escherichia coli [TaxId: 562]}
Probab=44.31 E-value=3.4 Score=19.83 Aligned_cols=13 Identities=8% Similarity=0.217 Sum_probs=10.7
Q ss_pred cCCCcCceeeecc
Q psy12155 26 EFPTCPKFYNIFH 38 (78)
Q Consensus 26 ~~p~c~~~yNIfh 38 (78)
.+|+|-++||+..
T Consensus 4 ~c~~cG~~Yh~~~ 16 (35)
T d1e4va2 4 VHAPSGRVYHVKF 16 (35)
T ss_dssp EETTTTEEEETTT
T ss_pred CCcCcCChhhhcc
Confidence 4689999999963
No 2
>d2ak3a2 g.41.2.1 (A:125-161) Microbial and mitochondrial ADK, insert "zinc finger" domain {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=42.28 E-value=3.8 Score=19.93 Aligned_cols=14 Identities=29% Similarity=0.482 Sum_probs=11.3
Q ss_pred ccCCCcCceeeecc
Q psy12155 25 FEFPTCPKFYNIFH 38 (78)
Q Consensus 25 ~~~p~c~~~yNIfh 38 (78)
..+|+|-++|||..
T Consensus 3 ~vc~~cG~~Yh~~~ 16 (37)
T d2ak3a2 3 WIHPGSGRVYNIEF 16 (37)
T ss_dssp EEETTTTEEEETTT
T ss_pred eeeCCcCChhhhcc
Confidence 35799999999964
No 3
>d1akya2 g.41.2.1 (A:131-168) Microbial and mitochondrial ADK, insert "zinc finger" domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=40.54 E-value=5.2 Score=19.46 Aligned_cols=14 Identities=14% Similarity=0.325 Sum_probs=11.1
Q ss_pred ccCCCcCceeeecc
Q psy12155 25 FEFPTCPKFYNIFH 38 (78)
Q Consensus 25 ~~~p~c~~~yNIfh 38 (78)
..++.|-++||+..
T Consensus 3 r~C~~cG~~Yh~~~ 16 (38)
T d1akya2 3 LIHPASGRSYHKIF 16 (38)
T ss_dssp EECTTTCCEEETTT
T ss_pred cCCcCccchhhhhc
Confidence 35789999999854
No 4
>d1s3ga2 g.41.2.1 (A:126-160) Microbial and mitochondrial ADK, insert "zinc finger" domain {Bacillus globisporus [TaxId: 1459]}
Probab=35.46 E-value=5.6 Score=18.95 Aligned_cols=14 Identities=14% Similarity=0.325 Sum_probs=11.1
Q ss_pred ccCCCcCceeeecc
Q psy12155 25 FEFPTCPKFYNIFH 38 (78)
Q Consensus 25 ~~~p~c~~~yNIfh 38 (78)
..+|.|-++||+..
T Consensus 3 ~~C~~CG~~Yh~~~ 16 (35)
T d1s3ga2 3 RICKVCGTSYHLLF 16 (35)
T ss_dssp EEETTTCCEEETTT
T ss_pred cCCcCcCchhcccc
Confidence 35789999999853
No 5
>d1zina2 g.41.2.1 (A:126-160) Microbial and mitochondrial ADK, insert "zinc finger" domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=29.59 E-value=8.1 Score=18.37 Aligned_cols=14 Identities=14% Similarity=0.308 Sum_probs=10.9
Q ss_pred ccCCCcCceeeecc
Q psy12155 25 FEFPTCPKFYNIFH 38 (78)
Q Consensus 25 ~~~p~c~~~yNIfh 38 (78)
..+++|-++||+..
T Consensus 3 r~C~~CG~~Yh~~~ 16 (35)
T d1zina2 3 RICRNCGATYHLIF 16 (35)
T ss_dssp EEETTTCCEEETTT
T ss_pred cCCcCcCchhcccc
Confidence 35789999999743
No 6
>d1dwka2 d.72.1.1 (A:87-156) Cyanase C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=23.28 E-value=6.2 Score=21.84 Aligned_cols=11 Identities=45% Similarity=0.827 Sum_probs=8.6
Q ss_pred CCCcccccccc
Q psy12155 39 PFDPVAYRIEP 49 (78)
Q Consensus 39 p~DPvAyRlEP 49 (78)
|+||+-||+--
T Consensus 3 PtDP~iYR~yE 13 (70)
T d1dwka2 3 PTDPTMYRFYE 13 (70)
T ss_dssp CCSHHHHHHHH
T ss_pred CCCchhhhHHH
Confidence 78999898753
No 7
>d1ak2a2 g.41.2.1 (A:147-176) Microbial and mitochondrial ADK, insert "zinc finger" domain {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=22.31 E-value=14 Score=17.00 Aligned_cols=9 Identities=22% Similarity=0.456 Sum_probs=7.5
Q ss_pred CCcCceeee
Q psy12155 28 PTCPKFYNI 36 (78)
Q Consensus 28 p~c~~~yNI 36 (78)
|+|-++|||
T Consensus 1 P~sG~~Yhv 9 (30)
T d1ak2a2 1 PQSGRSYHE 9 (30)
T ss_dssp TTTCCEEBT
T ss_pred CCCCCCccc
Confidence 678889988
No 8
>d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]}
Probab=18.70 E-value=15 Score=23.57 Aligned_cols=16 Identities=19% Similarity=0.524 Sum_probs=12.4
Q ss_pred eccCCCcccccccccc
Q psy12155 36 IFHPFDPVAYRIEPLI 51 (78)
Q Consensus 36 Ifhp~DPvAyRlEPli 51 (78)
-||-|||+.|+++|-.
T Consensus 46 ~y~gY~~~dy~vd~~~ 61 (354)
T d1g94a2 46 WWTRYQPVSYELQSRG 61 (354)
T ss_dssp GGGGGSBSCSCSCBTT
T ss_pred CcccCCCCcceeCCCC
Confidence 3788999999877644
No 9
>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=14.45 E-value=20 Score=22.18 Aligned_cols=16 Identities=19% Similarity=0.453 Sum_probs=13.1
Q ss_pred eecChHHHHHHhhCCc
Q psy12155 4 AFGSPVGMFVNVRGID 19 (78)
Q Consensus 4 ~~GSPlg~fl~lr~~~ 19 (78)
.+|.|+++.|+.++..
T Consensus 40 iVG~Pla~lL~~~gaT 55 (171)
T d1edza1 40 IVGRPLAALLANDGAT 55 (171)
T ss_dssp TTHHHHHHHHHTTSCE
T ss_pred ccHHHHHHHHHHCCCE
Confidence 4799999999988753
No 10
>d1vbka1 c.26.2.6 (A:176-307) Hypothetical protein PH1313, C-terminal domain {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=13.91 E-value=24 Score=20.89 Aligned_cols=13 Identities=15% Similarity=0.253 Sum_probs=10.9
Q ss_pred ChHHHHHHhhCCc
Q psy12155 7 SPVGMFVNVRGID 19 (78)
Q Consensus 7 SPlg~fl~lr~~~ 19 (78)
||++.++++|+.-
T Consensus 16 SpVAa~lmmkRG~ 28 (132)
T d1vbka1 16 SALAIFLMMKRGV 28 (132)
T ss_dssp HHHHHHHHHHBTC
T ss_pred hHHHHHHHHHCCC
Confidence 9999999997643
Done!