RPS-BLAST 2.2.26 [Sep-21-2011]

Database: pdb70 
           27,921 sequences; 6,701,793 total letters

Searching..................................................done

Query= psy12155
         (78 letters)



>2f7f_A Nicotinate phosphoribosyltransferase, putative; structural
           genomics, PSI; 2.00A {Enterococcus faecalis} SCOP:
           c.1.17.1 d.41.2.1
          Length = 494

 Score = 28.9 bits (65), Expect = 0.11
 Identities = 8/50 (16%), Positives = 15/50 (30%), Gaps = 6/50 (12%)

Query: 19  DVLGEEFEFPTCPKFYNIFHPFDP------VAYRIEPLIVPAMEHVRPVQ 62
           D +    E P   +   +FHP           +   P++       + V 
Sbjct: 379 DYVTLWNEDPRQEEEIYMFHPVHTFINKYVRDFEARPVLQDIFVEGKRVY 428


  Database: pdb70
    Posted date:  Sep 4, 2012  3:40 AM
  Number of letters in database: 6,701,793
  Number of sequences in database:  27,921
  
Lambda     K      H
   0.331    0.149    0.496 

Gapped
Lambda     K      H
   0.267   0.0709    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,353,169
Number of extensions: 69743
Number of successful extensions: 128
Number of sequences better than 10.0: 1
Number of HSP's gapped: 128
Number of HSP's successfully gapped: 3
Length of query: 78
Length of database: 6,701,793
Length adjustment: 47
Effective length of query: 31
Effective length of database: 5,389,506
Effective search space: 167074686
Effective search space used: 167074686
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 51 (23.5 bits)