RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy12157
         (148 letters)



>d2b1ya1 b.156.1.1 (A:4-104) Hypothetical protein Atu1913
          {Agrobacterium tumefaciens [TaxId: 358]}
          Length = 101

 Score = 26.8 bits (59), Expect = 0.53
 Identities = 8/25 (32%), Positives = 11/25 (44%)

Query: 74 TGQWHKTIPLDNGEEVIMYSVKTIP 98
          T  WH  I  +    +   SVK +P
Sbjct: 65 TMHWHLIIDAEGHSGLAESSVKMLP 89


>d1r5aa2 c.47.1.5 (A:2-86) Class delta GST {Mosquito (Anopheles
          dirus b), isozyme 1-5 [TaxId: 123217]}
          Length = 85

 Score = 24.5 bits (53), Expect = 3.3
 Identities = 10/54 (18%), Positives = 18/54 (33%), Gaps = 5/54 (9%)

Query: 30 YWTETPSEVRRCSWFYKASLEARYIPYEERVADLLEGE-FKAAFTTGQWHKTIP 82
          Y+       R          +   +  + +V +++EGE  K  F        IP
Sbjct: 5  YYLPASPPCRSVLLL----AKMIGVELDLKVLNIMEGEQLKPDFVELNPQHCIP 54


>d1shxa1 b.6.1.5 (A:32-170) Ephrin-a5 {Mouse (Mus musculus) [TaxId:
           10090]}
          Length = 138

 Score = 24.4 bits (53), Expect = 4.6
 Identities = 9/50 (18%), Positives = 20/50 (40%)

Query: 99  LDNGEEVIMYSVKVRVSTYVPQWHKTIPLDNGEEVIMYSVKMEAVTGCAV 148
              G+  I   +   +  + P +  ++P D  E  ++Y V  +  + C  
Sbjct: 16  FQRGDYHIDVCINDYLDVFCPHYEDSVPEDKTERYVLYMVNFDGYSACDH 65


>d2ibaa1 d.96.1.4 (A:1-136) Urate oxidase (uricase) {Aspergillus
           flavus [TaxId: 5059]}
          Length = 136

 Score = 24.3 bits (53), Expect = 4.8
 Identities = 16/73 (21%), Positives = 26/73 (35%)

Query: 45  YKASLEARYIPYEERVADLLEGEFKAAFTTGQWHKTIPLDNGEEVIMYSVKTIPLDNGEE 104
           +K         YE  V  LLEGE + ++T       +  D+ +  I  + K  P+   E 
Sbjct: 19  HKDEKTGVQTVYEMTVCVLLEGEIETSYTKADNSVIVATDSIKNTIYITAKQNPVTPPEL 78

Query: 105 VIMYSVKVRVSTY 117
                    +  Y
Sbjct: 79  FGSILGTHFIEKY 91


>d2a90a1 d.289.1.1 (A:43-131) Deltex (Dx) {Fruit fly (Drosophila
           melanogaster) [TaxId: 7227]}
          Length = 89

 Score = 23.8 bits (51), Expect = 5.1
 Identities = 13/79 (16%), Positives = 26/79 (32%), Gaps = 2/79 (2%)

Query: 41  CSWFYKASLEARYIPYEERVADLLEGEFKAAFTTGQWHKTIPLDNGEEVIMYSVKTIPLD 100
             W +++    +++PY   V+  LE       T        P      V + ++      
Sbjct: 5   SVWEFES--RGKWLPYSPAVSQHLERAHAKKLTRVMLSDADPSLEQYYVNVRTMTQESEA 62

Query: 101 NGEEVIMYSVKVRVSTYVP 119
                 + ++ VR   Y P
Sbjct: 63  ETAGSGLLTIGVRRMFYAP 81


>d1jlva2 c.47.1.5 (A:1-84) Class delta GST {Mosquito (Anopheles
          dirus b), isozyme 1-3 [TaxId: 123217]}
          Length = 84

 Score = 23.7 bits (51), Expect = 5.2
 Identities = 12/66 (18%), Positives = 21/66 (31%), Gaps = 6/66 (9%)

Query: 30 YWTETPSEVRRCSWFYKASLEARYIPYEERVADLLEGE-FKAAFTTGQWHKTIP-LDNGE 87
          Y+    +  R           A  +    ++ +L+ GE  K  F        IP L +  
Sbjct: 4  YYLPGSAPCRAVQMT----AAAVGVELNLKLTNLMAGEHMKPEFLKINPQHCIPTLVDNG 59

Query: 88 EVIMYS 93
            +  S
Sbjct: 60 FALWES 65


>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase
           CbhA {Clostridium thermocellum [TaxId: 1515]}
          Length = 511

 Score = 24.4 bits (52), Expect = 7.8
 Identities = 7/41 (17%), Positives = 9/41 (21%)

Query: 37  EVRRCSWFYKASLEARYIPYEERVADLLEGEFKAAFTTGQW 77
                   Y  + +  Y  Y       LE   K     G  
Sbjct: 259 FYWAACELYVTTGKDEYKNYLMNSPHYLEMPAKMGENGGAN 299


>d3b7sa1 a.118.1.7 (A:461-610) Leukotriene A4 hydrolase C-terminal
          domain {Human (Homo sapiens) [TaxId: 9606]}
          Length = 150

 Score = 23.6 bits (51), Expect = 9.3
 Identities = 3/29 (10%), Positives = 12/29 (41%), Gaps = 2/29 (6%)

Query: 36 SEVRRCSWFYKASLEARYIPYEERVADLL 64
          SE+R    + +  +++++         + 
Sbjct: 72 SEIR--FRWLRLCIQSKWEDAIPLALKMA 98


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.320    0.135    0.414 

Gapped
Lambda     K      H
   0.267   0.0627    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 591,965
Number of extensions: 26626
Number of successful extensions: 76
Number of sequences better than 10.0: 1
Number of HSP's gapped: 76
Number of HSP's successfully gapped: 16
Length of query: 148
Length of database: 2,407,596
Length adjustment: 77
Effective length of query: 71
Effective length of database: 1,350,386
Effective search space: 95877406
Effective search space used: 95877406
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (22.9 bits)