BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12163
(88 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9TU72|XPR1_MUSVI Xenotropic and polytropic retrovirus receptor 1 OS=Mustela vison
GN=XPR1 PE=2 SV=1
Length = 696
Score = 67.0 bits (162), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/45 (66%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Query: 5 FFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVY 49
FFY W+ +ISS Y+ IWD+KMDWGLFDKNA +N FLREE VY
Sbjct: 510 FFYLWIVFCIISSCYTLIWDLKMDWGLFDKNA-GENTFLREEIVY 553
>sp|Q9UBH6|XPR1_HUMAN Xenotropic and polytropic retrovirus receptor 1 OS=Homo sapiens
GN=XPR1 PE=1 SV=1
Length = 696
Score = 67.0 bits (162), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/45 (66%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Query: 5 FFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVY 49
FFY W+ +ISS Y+ IWD+KMDWGLFDKNA +N FLREE VY
Sbjct: 510 FFYLWIVFYIISSCYTLIWDLKMDWGLFDKNA-GENTFLREEIVY 553
>sp|Q9R031|XPR1_MUSMC Xenotropic and polytropic retrovirus receptor 1 homolog OS=Mus
musculus castaneus GN=Xpr1 PE=2 SV=1
Length = 691
Score = 66.2 bits (160), Expect = 6e-11, Method: Composition-based stats.
Identities = 30/45 (66%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Query: 5 FFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVY 49
FFY W+ +ISS Y+ IWD+KMDWGLFDKNA +N FLREE VY
Sbjct: 510 FFYLWVFFCIISSCYTLIWDLKMDWGLFDKNA-GENTFLREEIVY 553
>sp|Q9R032|XPR1_MUSSP Xenotropic and polytropic retrovirus receptor 1 OS=Mus spretus
GN=Xpr1 PE=1 SV=1
Length = 696
Score = 65.9 bits (159), Expect = 6e-11, Method: Composition-based stats.
Identities = 30/45 (66%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Query: 5 FFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVY 49
FFY W+ +ISS Y+ IWD+KMDWGLFDKNA +N FLREE VY
Sbjct: 510 FFYLWVFFCIISSCYTLIWDLKMDWGLFDKNA-GENTFLREEIVY 553
>sp|Q9QZ71|XPR1_MUSDU Xenotropic and polytropic retrovirus receptor 1 OS=Mus dunni
GN=Xpr1 PE=1 SV=1
Length = 696
Score = 65.9 bits (159), Expect = 6e-11, Method: Composition-based stats.
Identities = 30/45 (66%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Query: 5 FFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVY 49
FFY W+ +ISS Y+ IWD+KMDWGLFDKNA +N FLREE VY
Sbjct: 510 FFYLWVFFCIISSCYTLIWDLKMDWGLFDKNA-GENTFLREEIVY 553
>sp|Q9Z0U0|XPR1_MOUSE Xenotropic and polytropic retrovirus receptor 1 OS=Mus musculus
GN=Xpr1 PE=1 SV=1
Length = 695
Score = 65.9 bits (159), Expect = 7e-11, Method: Composition-based stats.
Identities = 30/45 (66%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Query: 5 FFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVY 49
FFY W+ +ISS Y+ IWD+KMDWGLFDKNA +N FLREE VY
Sbjct: 510 FFYLWVFFCIISSCYTLIWDLKMDWGLFDKNA-GENTFLREEIVY 553
>sp|A7XZ53|XPR1_MUSPA Xenotropic and polytropic retrovirus receptor 1 homolog OS=Mus
pahari GN=Xpr1 PE=1 SV=1
Length = 696
Score = 65.9 bits (159), Expect = 7e-11, Method: Composition-based stats.
Identities = 30/45 (66%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Query: 5 FFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVY 49
FFY W+ +ISS Y+ IWD+KMDWGLFDKNA +N FLREE VY
Sbjct: 510 FFYLWVFFCIISSCYTLIWDLKMDWGLFDKNA-GENTFLREEIVY 553
>sp|Q6DD44|XPR1_XENLA Xenotropic and polytropic retrovirus receptor 1 homolog OS=Xenopus
laevis GN=xpr1 PE=2 SV=1
Length = 692
Score = 65.1 bits (157), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/45 (64%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 5 FFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVY 49
FFY W+ ISS Y+ IWD+KMDWGLFD+NA +N FLREE VY
Sbjct: 506 FFYLWIVFYFISSCYTLIWDLKMDWGLFDRNA-GENTFLREEIVY 549
>sp|Q28CY9|XPR1_XENTR Xenotropic and polytropic retrovirus receptor 1 homolog OS=Xenopus
tropicalis GN=xpr1 PE=2 SV=1
Length = 692
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/45 (64%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Query: 5 FFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVY 49
FFY W+ +ISS Y+ IWD+KMDWGLFD+NA +N FLREE VY
Sbjct: 506 FFYLWIIFYLISSCYTLIWDLKMDWGLFDRNA-GENTFLREEIVY 549
>sp|Q9QZ70|XPR1_CRIGR Xenotropic and polytropic retrovirus receptor 1 homolog
OS=Cricetulus griseus GN=XPR1 PE=2 SV=1
Length = 696
Score = 63.9 bits (154), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/45 (64%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 5 FFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVY 49
F Y W+ ISS Y+ IWD+KMDWGLFDKNA +N FLREE VY
Sbjct: 510 FLYLWVVFCAISSCYTLIWDLKMDWGLFDKNA-GENTFLREEIVY 553
>sp|A8DZH4|XPR1_DANRE Xenotropic and polytropic retrovirus receptor 1 homolog OS=Danio
rerio GN=xpr1 PE=3 SV=1
Length = 693
Score = 57.0 bits (136), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 5 FFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVY 49
F Y +A +++S Y+ +WD+KMDWGLFD+NA +N LREE VY
Sbjct: 509 FLYIMIACRIVNSCYTLLWDLKMDWGLFDRNA-GENTLLREEIVY 552
>sp|Q6R8G5|PHO15_ARATH Phosphate transporter PHO1 homolog 5 OS=Arabidopsis thaliana
GN=PHO1-H5 PE=2 SV=2
Length = 823
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 2 DNPFFYPWLAA--SVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVYSSTTSTLIGY 59
DN F + LA S I++I+ WD+ DWGL ++ + NP+LR++ + I
Sbjct: 688 DNQFIWRILAGIFSAIAAIFCTYWDLVYDWGLLNRTS--KNPWLRDKLLVPQKKVYFIAM 745
Query: 60 VLFNPTGILMIQFLQSI 76
+L +L +LQ++
Sbjct: 746 IL---NILLRFAWLQTV 759
>sp|Q93ZF5|PHO11_ARATH Phosphate transporter PHO1 homolog 1 OS=Arabidopsis thaliana
GN=PHO1-H1 PE=2 SV=1
Length = 784
Score = 38.1 bits (87), Expect = 0.016, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 10 LAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVYSSTTSTLIGYVLFNPTGILM 69
+A S +++IY WD DWGL N+ +NP+LR + + + VL +L
Sbjct: 662 VAMSSVATIYQLYWDFVKDWGLLQHNS--NNPWLRNQLMLRQKSIYYFSMVL---NLVLR 716
Query: 70 IQFLQSI 76
+ +LQ++
Sbjct: 717 LAWLQTV 723
>sp|Q8S403|PHO1_ARATH Phosphate transporter PHO1 OS=Arabidopsis thaliana GN=PHO1 PE=2
SV=1
Length = 782
Score = 37.7 bits (86), Expect = 0.022, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 10 LAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETV 48
L +SV+++IY WD DWGL N NP+LR+ V
Sbjct: 660 LVSSVVATIYQLYWDFVKDWGLL--NPKSKNPWLRDNLV 696
>sp|Q9LJW0|PHO19_ARATH Phosphate transporter PHO1 homolog 9 OS=Arabidopsis thaliana
GN=PHO1-H9 PE=2 SV=1
Length = 800
Score = 37.4 bits (85), Expect = 0.031, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 42/72 (58%), Gaps = 9/72 (12%)
Query: 9 WLAASV----ISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVYSSTTSTLIGYVLFNP 64
WL +V I+++++ WDI DWGL ++N+ NP+LR++ + + I +++
Sbjct: 670 WLTVAVTTSSIATLFNTYWDIFRDWGLMNRNS--KNPWLRDKLLVPYKS---IYFIVMVA 724
Query: 65 TGILMIQFLQSI 76
+L + ++Q++
Sbjct: 725 NVVLRLAWMQTV 736
>sp|Q651J5|PHO13_ORYSJ Phosphate transporter PHO1-3 OS=Oryza sativa subsp. japonica
GN=PHO1-3 PE=2 SV=1
Length = 828
Score = 36.6 bits (83), Expect = 0.042, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 15/75 (20%)
Query: 9 WLAASVI----SSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVYSSTTSTLIGYVLFNP 64
WL+ VI ++IY WD DWGL N+ NP+LR + + Y+ F
Sbjct: 702 WLSLVVIVSSLATIYQLYWDFVKDWGLLQFNS--KNPWLRNDLILKQK------YIYFLS 753
Query: 65 TG---ILMIQFLQSI 76
G IL + +LQ++
Sbjct: 754 MGLNLILRLAWLQTV 768
>sp|Q657S5|PHO11_ORYSJ Phosphate transporter PHO1-1 OS=Oryza sativa subsp. japonica
GN=PHO1-1 PE=2 SV=2
Length = 799
Score = 35.8 bits (81), Expect = 0.083, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 16 SSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVYSSTTSTLIGYVLFNPTGILMIQFLQS 75
+++Y WD DWGL N+ NP+LR + + S + I Y+ +L + +LQ+
Sbjct: 683 ATMYQLYWDFVKDWGLLQPNS--KNPWLRNDLILKSKS---IYYLSMGLNLVLRLAWLQT 737
Query: 76 I 76
+
Sbjct: 738 V 738
>sp|Q54MJ9|SPXS3_DICDI SPX and EXS domain-containing protein 3 OS=Dictyostelium discoideum
GN=xpr1 PE=3 SV=1
Length = 919
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 9 WLAASVISSIYSYIWDIKMDWGLFDKNAP----PDNPFLREETVY 49
W+ S++S+IYS WD MDWG+ ++ D+ F R + VY
Sbjct: 679 WIIISIVSTIYSLGWDFLMDWGVLRTHSRNFLLRDHLFYRHKWVY 723
>sp|Q55B06|SPXS1_DICDI SPX and EXS domain-containing protein 1 OS=Dictyostelium discoideum
GN=DDB_G0271664 PE=3 SV=2
Length = 923
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 9 WLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVYS 50
W V+S++Y Y WD+ +DWG P P LR + +Y
Sbjct: 657 WCVCFVLSTLYMYCWDVVVDWGFMWLGKP--RPLLRHQLMYK 696
>sp|Q6R8G0|PHO1A_ARATH Phosphate transporter PHO1 homolog 10 OS=Arabidopsis thaliana
GN=PHO1-H10 PE=2 SV=1
Length = 777
Score = 33.9 bits (76), Expect = 0.33, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 10 LAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREE 46
L +S +++ + WDI +DWGL K++ NP+LR++
Sbjct: 650 LVSSGVATGMNTFWDIVIDWGLLRKHS--KNPYLRDK 684
>sp|Q6R8G6|PHO14_ARATH Phosphate transporter PHO1 homolog 4 OS=Arabidopsis thaliana
GN=PHO1-H4 PE=2 SV=1
Length = 745
Score = 33.1 bits (74), Expect = 0.51, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 13 SVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVYSSTTSTLIGYVLFNPTGILMIQF 72
S +++ Y WDI +DWGL + N FLR++ + T VL +L + +
Sbjct: 622 SGVATFYGTYWDIVLDWGLLQRGC--KNSFLRDKLLVPHKTVYYAAMVL---NVLLRLVW 676
Query: 73 LQSI 76
LQ++
Sbjct: 677 LQTV 680
>sp|Q6R8G8|PHO12_ARATH Phosphate transporter PHO1 homolog 2 OS=Arabidopsis thaliana
GN=PHO1-H2 PE=2 SV=2
Length = 807
Score = 33.1 bits (74), Expect = 0.55, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 11 AASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVYSSTTSTLIGYVLFNPTGILMI 70
++S++++++ WD DWGL +K + N +LR++ + I +L +L
Sbjct: 683 SSSILAAVFCTYWDFVHDWGLLNKTS--KNRWLRDKLLIPQKKVYFIAMIL---NVVLRF 737
Query: 71 QFLQSI 76
+LQ+I
Sbjct: 738 AWLQTI 743
>sp|Q54G02|SPXS5_DICDI SPX and EXS domain-containing protein 5 OS=Dictyostelium discoideum
GN=DDB_G0290647 PE=3 SV=2
Length = 927
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 3 NPFFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPD-NPF---LREETVYSST 52
+P+ W+ A V +S+YSY WD+ DW + + NPF LR+ +Y T
Sbjct: 791 SPYRLIWVVAGVSNSMYSYWWDLICDWSIVVRPKGQHWNPFKWTLRKRRMYQPT 844
>sp|Q6R8G3|PHO17_ARATH Phosphate transporter PHO1 homolog 7 OS=Arabidopsis thaliana
GN=PHO1-H7 PE=2 SV=1
Length = 750
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
Query: 13 SVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVYSSTTSTLIGYVLFNPTGILMIQF 72
S +++ Y WDI DWGL + P LRE+ + + VL +L + +
Sbjct: 629 SALATFYGTYWDIVFDWGLLHR---PSKHLLREKLLVPHKAVYYVAIVL---NIVLRMAW 682
Query: 73 LQSI 76
LQ++
Sbjct: 683 LQTV 686
>sp|Q6R8G2|PHO18_ARATH Phosphate transporter PHO1 homolog 8 OS=Arabidopsis thaliana
GN=PHO1-H8 PE=2 SV=1
Length = 751
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 13 SVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVYSSTTSTLIGYVLFNPTGILMIQF 72
S +++ Y WDI DWGL + P +LRE+ + + + YV +L + +
Sbjct: 630 SGLATFYGTYWDIVYDWGLLHR---PSKSWLREKLLVPHKS---VYYVAMVVNVVLRLAW 683
Query: 73 LQSI 76
LQ++
Sbjct: 684 LQTV 687
>sp|Q9UTD8|ERD11_SCHPO Protein ERD1 homolog 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=erd1 PE=3 SV=2
Length = 373
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 7 YPWLAASVISSIYSYIWDIKMDWGL 31
+ W +S I+S YS+ WD+ MDW L
Sbjct: 247 FLWNTSSAINSTYSFWWDVSMDWSL 271
>sp|Q6R8G4|PHO16_ARATH Phosphate transporter PHO1 homolog 6 OS=Arabidopsis thaliana
GN=PHO1-H6 PE=2 SV=1
Length = 756
Score = 30.4 bits (67), Expect = 3.1, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 13 SVISSIYSYIWDIKMDWGLFDKNAPPDNPFLRE 45
S ++ ++ WD+ DWGL ++ + NP+LR+
Sbjct: 638 SAMAVVFCTYWDLVYDWGLLNRTS--KNPWLRD 668
>sp|Q9UU86|SYG1_SCHPO Protein SYG1 homolog OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPCC1827.07c PE=3 SV=1
Length = 682
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 10/18 (55%), Positives = 14/18 (77%)
Query: 15 ISSIYSYIWDIKMDWGLF 32
++S++SY WDI MDW L
Sbjct: 534 VNSLFSYTWDILMDWNLL 551
>sp|Q9LRT1|Y3804_ARATH Probably inactive leucine-rich repeat receptor-like protein kinase
At3g28040 OS=Arabidopsis thaliana GN=At3g28040 PE=2 SV=1
Length = 1016
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Query: 25 IKMDWGLFDKNAPPDNPFLREETVYSSTTSTLIGYVLFNPTGILMIQFLQ 74
+ + W F+ PP+ FL+ TV S LIG V P I Q LQ
Sbjct: 444 LNLSWNHFNTRVPPEIEFLQNLTVLDLRNSALIGSV---PADICESQSLQ 490
>sp|Q6K991|PHO12_ORYSJ Phosphate transporter PHO1-2 OS=Oryza sativa subsp. japonica
GN=PHO1-2 PE=2 SV=1
Length = 815
Score = 30.4 bits (67), Expect = 3.6, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Query: 6 FYPWLA--ASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVYSSTTSTLIGYVL 61
F+ W+ +S ++IY WD DWG N N +LR E + + + + +L
Sbjct: 688 FWVWMVIISSSGATIYQLYWDFVKDWGFL--NPKSKNRWLRNELILKNKSIYYVSMML 743
>sp|Q54HI2|SPXS4_DICDI SPX and EXS domain-containing protein 4 OS=Dictyostelium discoideum
GN=DDB_G0289423 PE=3 SV=1
Length = 1081
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 9 WLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPF--LREETVYSS 51
W +V+ S Y + D+ +DWG F N NP LRE+ V+
Sbjct: 810 WFGINVVGSFYKFYADMSVDWGFF--NNYKTNPAWPLREKLVFKK 852
>sp|Q10151|ERD12_SCHPO Protein ERD1 homolog 2 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPAC1D4.05c PE=3 SV=1
Length = 387
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 21/26 (80%)
Query: 6 FYPWLAASVISSIYSYIWDIKMDWGL 31
F+ W+ ++++SS Y+++WD+ +DW +
Sbjct: 288 FWLWILSALLSSAYTFLWDVFIDWRI 313
>sp|Q9FMB0|GL19_ARATH Putative germin-like protein subfamily 1 member 9 OS=Arabidopsis
thaliana GN=At5g38910 PE=3 SV=1
Length = 222
Score = 28.9 bits (63), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 25 IKMDWGLFDKNAPPDNPFLREETVYSSTTSTLIGYVLFNPTGILMIQFL 73
+++D+G++ +N P +P E +Y + + +G+V NP L + L
Sbjct: 98 VRIDYGVYGQNPPHTHP-RASEVLYVAVGTLFVGFVTSNPENRLFSKTL 145
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.140 0.462
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,161,407
Number of Sequences: 539616
Number of extensions: 1129809
Number of successful extensions: 3106
Number of sequences better than 100.0: 44
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 3072
Number of HSP's gapped (non-prelim): 44
length of query: 88
length of database: 191,569,459
effective HSP length: 58
effective length of query: 30
effective length of database: 160,271,731
effective search space: 4808151930
effective search space used: 4808151930
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 55 (25.8 bits)