BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12168
(150 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 129 bits (324), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 83/116 (71%), Gaps = 1/116 (0%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
D+ YAH++F AFD + NGAI F D +V LS LLRG+++EKL+W F LYDIN DGCI++
Sbjct: 126 DATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKE 185
Query: 73 ELTQIVQAVHELMGRKNQTDAARKAK-EQIDFVFRKLDLNDDGVVTLEEFIESCLK 127
E+ I+++++++MGR A E ++ F+K+D N DGVVT++EF+E+C K
Sbjct: 186 EMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQK 241
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 127 bits (318), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 82/117 (70%), Gaps = 7/117 (5%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
D++ YAHY+F AFD G++ F D + LS LLRG+++EKLRWTF LYDIN DG I++
Sbjct: 86 DASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKE 145
Query: 73 ELTQIVQAVHELMGRKN----QTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESC 125
E+ IV+A++++MG+ + D R + +D F+K+D N DG+VTL+EF+ESC
Sbjct: 146 EMMDIVKAIYDMMGKYTYPVLKEDTPR---QHVDVFFQKMDKNKDGIVTLDEFLESC 199
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 126 bits (317), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 80/114 (70%), Gaps = 1/114 (0%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
D++ YAHY+F AFD G++ F D + LS LLRG+++EKLRWTF LYDIN DG I++
Sbjct: 50 DASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKE 109
Query: 73 ELTQIVQAVHELMGRKNQTDAARK-AKEQIDFVFRKLDLNDDGVVTLEEFIESC 125
E+ IV+A++++MG A ++ +D F+K+D N DG+VTL+EF+ESC
Sbjct: 110 EMMDIVKAIYDMMGAYTYPVLAEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESC 163
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 126 bits (316), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 82/117 (70%), Gaps = 7/117 (5%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
D++ YAHY+F AFD G++ F D + LS LLRG+++EKLRWTF LYDIN DG I++
Sbjct: 50 DASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKE 109
Query: 73 ELTQIVQAVHELMGRKN----QTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESC 125
E+ IV+A++++MG+ + D R + +D F+K+D N DG+VTL+EF+ESC
Sbjct: 110 EMMDIVKAIYDMMGKYTYPVLKEDTPR---QHVDVFFQKMDKNKDGIVTLDEFLESC 163
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 123 bits (309), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 83/119 (69%), Gaps = 7/119 (5%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
DS YAH++F AFD + NGA+SF D + LS LLRG++ EKL W F LYDIN DG I++
Sbjct: 99 DSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKE 158
Query: 73 ELTQIVQAVHELMGRKN----QTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCLK 127
E+ I++A++++MG+ + DA R + ++ F+K+D N DGVVT++EFIESC K
Sbjct: 159 EMLDIMKAIYDMMGKCTYPVLKEDAPR---QHVETFFQKMDKNKDGVVTIDEFIESCQK 214
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 123 bits (309), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 81/116 (69%), Gaps = 7/116 (6%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
D++ YAHY+F AFD G++ F D + LS LLRG+++EKLRWTF LYDIN DG I++
Sbjct: 53 DASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKE 112
Query: 73 ELTQIVQAVHELMGRKN----QTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIES 124
E+ IV+A++++MG+ + D R + +D F+K+D N DG+VTL+EF+ES
Sbjct: 113 EMMDIVKAIYDMMGKYTYPVLKEDTPR---QHVDVFFQKMDKNKDGIVTLDEFLES 165
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 100 bits (250), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 74/114 (64%), Gaps = 4/114 (3%)
Query: 14 SNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSE 73
+N Y +F+ FD N +G I F + + LS +L+G + +KLRW FKLYD++G+GCI R E
Sbjct: 50 ANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGE 109
Query: 74 LTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCLK 127
L I++A+ + N+ + A A+E + VF K+D+N DG ++LEEF+E K
Sbjct: 110 LLNIIKAIRAI----NRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQK 159
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 99.0 bits (245), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 74/119 (62%), Gaps = 11/119 (9%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
D++ +A +VF+ FD N +G I FR+ ++ LS RG + +KL+W F +YD++G+G IS++
Sbjct: 60 DASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKA 119
Query: 73 ELTQIVQAVHEL------MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESC 125
E+ +IVQA++++ M T R K +FR++D N DG ++LEEFI
Sbjct: 120 EMLEIVQAIYKMVSSVMKMPEDESTPEKRTEK-----IFRQMDTNRDGKLSLEEFIRGA 173
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 93.2 bits (230), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
D +A +VF FD N +G I F + + LS RG++ EKLRW FKLYD++ DG I+R+
Sbjct: 60 DPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRN 119
Query: 73 ELTQIVQAVHELMGRKNQTDAARKAKEQ-IDFVFRKLDLNDDGVVTLEEFIESC 125
E+ IV A+++++G + E+ +D +F +D N DG +TL+EF E
Sbjct: 120 EMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGS 173
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 87.4 bits (215), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
D + +A YVF FD + NG I F++ + LS RG + +KL W F+LYD++ +G IS
Sbjct: 60 DPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYD 119
Query: 73 ELTQIVQAVHELMGRKNQTDAARKAKEQ-IDFVFRKLDLNDDGVVTLEEFIESCLKVST 130
E+ +IV A+++++G + E+ ++ +F +D N DG +TLEEF E + T
Sbjct: 120 EMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKRDPT 178
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 86.7 bits (213), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 71/111 (63%), Gaps = 5/111 (4%)
Query: 17 YAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQ 76
+A+++F FD + NG I F + + LST RG++ EKL W F+LYD+N DG I+ E+
Sbjct: 64 FANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLT 123
Query: 77 IVQAVHELMGRK---NQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIES 124
IV +V+++MG N+ +A + + + +F+ +D N+DG +TL+EF E
Sbjct: 124 IVASVYKMMGSMVTLNEDEATPEMR--VKKIFKLMDKNEDGYITLDEFREG 172
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 86.3 bits (212), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 75/126 (59%), Gaps = 5/126 (3%)
Query: 8 EGVIRDSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDG 67
+G+ + +N + V+ FD N +G + F + + ++ +++ + +KL+W FKLYD +G+G
Sbjct: 49 QGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNG 108
Query: 68 CISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCLK 127
I ++EL + AV L G++ + +E I+ VF K+D+N+DG +TLEEFI K
Sbjct: 109 SIDKNELLDMFMAVQALNGQQTLS-----PEEFINLVFHKIDINNDGELTLEEFINGMAK 163
Query: 128 VSTQLE 133
LE
Sbjct: 164 DQDLLE 169
Score = 30.4 bits (67), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 73 ELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESC-LKVSTQ 131
E +Q +HE +KA + ID V+ D N DG V EFI + L + +
Sbjct: 31 EYPSGLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEK 90
Query: 132 LEKSIESCLKV 142
+E+ ++ K+
Sbjct: 91 MEQKLKWYFKL 101
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 83.6 bits (205), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Query: 48 GSIYEKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAK-EQIDFVFR 106
G+++EKL+W F LYDIN DG I++ E+ I+++++++MGR A E ++ F
Sbjct: 5 GTVHEKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFE 64
Query: 107 KLDLNDDGVVTLEEFIESCLK 127
K+D N DGVVT+EEF+E+C K
Sbjct: 65 KMDRNQDGVVTIEEFLEACQK 85
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 73/119 (61%), Gaps = 6/119 (5%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
++ Y +F+AFD N + I F + + L+ +LRG++ KL+WTFK+YD + +GCI R
Sbjct: 56 EATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQ 115
Query: 73 ELTQIVQAVHELMGRKN-QTDAARKAK-----EQIDFVFRKLDLNDDGVVTLEEFIESC 125
EL IV+++++L + + +A ++ K E +D +F +D N DG ++L EF+E
Sbjct: 116 ELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGA 174
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 79.7 bits (195), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 3/117 (2%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
D YA +VF++FD N +G + F++ ++ L G +KL W F LYD++G+G IS++
Sbjct: 68 DPKAYAQHVFRSFDSNLDGTLDFKEYVIALHXTTAGKTNQKLEWAFSLYDVDGNGTISKN 127
Query: 73 ELTQIVQAVHELMGRKN---QTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCL 126
E+ +IV A+ + + ++ D +++ + +++ NDD +T +EFIE L
Sbjct: 128 EVLEIVXAIFKXITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTL 184
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 67/120 (55%), Gaps = 9/120 (7%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
D YA +VF++FD N +G + F++ ++ L G +KL W F LYD++G+G IS++
Sbjct: 60 DPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKN 119
Query: 73 ELTQIVQAVHELMGRKN------QTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCL 126
E+ +IV A+ +++ ++ + K E+I F K DD +T +EFIE L
Sbjct: 120 EVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGK---KDDDKLTEKEFIEGTL 176
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 67/120 (55%), Gaps = 9/120 (7%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
D YA +VF++FD N +G + F++ ++ L G +KL W F LYD++G+G IS++
Sbjct: 60 DPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKN 119
Query: 73 ELTQIVQAVHELMGRKN------QTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCL 126
E+ +IV A+ +++ ++ + K E+I F K DD +T +EFIE L
Sbjct: 120 EVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGK---KDDDKLTEKEFIEGTL 176
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 67/120 (55%), Gaps = 9/120 (7%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
D YA +VF++FD N +G + F++ ++ L G +KL W F LYD++G+G IS++
Sbjct: 60 DPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKN 119
Query: 73 ELTQIVQAVHELMGRKN------QTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCL 126
E+ +IV A+ +++ ++ + K E+I F K DD +T +EFIE L
Sbjct: 120 EVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGK---KDDDKLTEKEFIEGTL 176
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 67/120 (55%), Gaps = 9/120 (7%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
D YA +VF++FD N +G + F++ ++ L G +KL W F LYD++G+G IS++
Sbjct: 61 DPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKN 120
Query: 73 ELTQIVQAVHELMGRKN------QTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCL 126
E+ +IV A+ +++ ++ + K E+I F K DD +T +EFIE L
Sbjct: 121 EVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGK---KDDDKLTEKEFIEGTL 177
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 66/120 (55%), Gaps = 9/120 (7%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
D YA +VF++FD N +G + F+ ++ L G +KL W F LYD++G+G IS++
Sbjct: 60 DPKAYAQHVFRSFDANSDGTLDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKN 119
Query: 73 ELTQIVQAVHELMGRKN------QTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCL 126
E+ +IV A+ +++ ++ + K E+I F K DD +T +EFIE L
Sbjct: 120 EVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGK---KDDDKLTEKEFIEGTL 176
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 66/120 (55%), Gaps = 9/120 (7%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
D YA +VF++FD N +G + F+ ++ L G +KL W F LYD++G+G IS++
Sbjct: 60 DPKAYAQHVFRSFDANSDGTLDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKN 119
Query: 73 ELTQIVQAVHELMGRKN------QTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCL 126
E+ +IV A+ +++ ++ + K E+I F K DD +T +EFIE L
Sbjct: 120 EVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGK---KDDDKLTEKEFIEGTL 176
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 10/111 (9%)
Query: 15 NLYAHYVFKAFDVNCNGAISFRDLLVTLSTL-LRGSIYEKLRWTFKLYDINGDGCISRSE 73
NL+A +F FDV NG I F + + +L ++EK+++ FKLYD+ G I R E
Sbjct: 73 NLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREE 132
Query: 74 LTQIVQAV---HELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEF 121
L ++V A+ EL+ ++ + +D F + D +DG + ++E+
Sbjct: 133 LKEMVVALLHESELVLSEDMIEV------MVDKAFVQADRKNDGKIDIDEW 177
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 10/111 (9%)
Query: 15 NLYAHYVFKAFDVNCNGAISFRDLLVTLSTL-LRGSIYEKLRWTFKLYDINGDGCISRSE 73
NL+A +F FDV NG I F + + +L ++EK+++ FKLYD+ G I R E
Sbjct: 73 NLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREE 132
Query: 74 LTQIVQAV---HELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEF 121
L ++V A+ EL+ ++ + +D F + D +DG + ++E+
Sbjct: 133 LKEMVVALLHESELVLSEDMIEV------MVDKAFVQADRKNDGKIDIDEW 177
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 7/108 (6%)
Query: 15 NLYAHYVFKAFDVNCNGAISFRDLLVTLSTL-LRGSIYEKLRWTFKLYDINGDGCISRSE 73
N V FD + NG + F++ + +S ++G +KLR+ F++YD++ DG IS E
Sbjct: 37 NPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGE 96
Query: 74 LTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEF 121
L Q+++ +M N D + ++ +D D + DG ++ EEF
Sbjct: 97 LFQVLK----MMVGNNLKDT--QLQQIVDKTIINADKDGDGRISFEEF 138
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/127 (20%), Positives = 63/127 (49%), Gaps = 24/127 (18%)
Query: 22 FKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQAV 81
FK D++ +G++S + + +L L + + +++ ++D +G+G + + + ++ V
Sbjct: 12 FKKLDLDNSGSLSVEEFM-SLPELQQNPLVQRV---IDIFDTDGNGEV---DFKEFIEGV 64
Query: 82 HELMGRKNQTDAARKAKEQ-IDFVFRKLDLNDDGVVTLEEFIESCLKV-------STQLE 133
+ + + KEQ + F FR D++ DG ++ E + LK+ TQL+
Sbjct: 65 SQF--------SVKGDKEQKLRFAFRIYDMDKDGYISNGELFQ-VLKMMVGNNLKDTQLQ 115
Query: 134 KSIESCL 140
+ ++ +
Sbjct: 116 QIVDKTI 122
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 7/108 (6%)
Query: 15 NLYAHYVFKAFDVNCNGAISFRDLLVTLSTL-LRGSIYEKLRWTFKLYDINGDGCISRSE 73
N V FD + NG + F++ + +S ++G +KLR+ F++YD++ DG IS E
Sbjct: 51 NPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGE 110
Query: 74 LTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEF 121
L Q+++ +M N D + ++ +D D + DG ++ EEF
Sbjct: 111 LFQVLK----MMVGNNLKDT--QLQQIVDKTIINADKDGDGRISFEEF 152
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/103 (20%), Positives = 52/103 (50%), Gaps = 16/103 (15%)
Query: 22 FKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQAV 81
FK D++ +G++S + + +L L + + +++ ++D +G+G + + + ++ V
Sbjct: 26 FKKLDLDNSGSLSVEEFM-SLPELQQNPLVQRV---IDIFDTDGNGEV---DFKEFIEGV 78
Query: 82 HELMGRKNQTDAARKAKEQ-IDFVFRKLDLNDDGVVTLEEFIE 123
+ + + KEQ + F FR D++ DG ++ E +
Sbjct: 79 SQF--------SVKGDKEQKLRFAFRIYDMDKDGYISNGELFQ 113
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 56/98 (57%), Gaps = 11/98 (11%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQAVHELM 85
D + NG I F + L ++ ++ + E++R F+++D +G+G IS +EL ++ + E +
Sbjct: 52 DADGNGTIDFPEFLTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL 111
Query: 86 GRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
TD E++D + R+ +++ DG V EEF++
Sbjct: 112 -----TD------EEVDEMIREANIDGDGQVNYEEFVQ 138
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQA 80
F+ FD + NG IS +L ++ L E++ + +I+GDG ++ E Q++ A
Sbjct: 83 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFVQMMTA 142
Score = 29.6 bits (65), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 55
Query: 113 DGVVTLEEFI 122
+G + EF+
Sbjct: 56 NGTIDFPEFL 65
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 7/108 (6%)
Query: 15 NLYAHYVFKAFDVNCNGAISFRDLLVTLSTL-LRGSIYEKLRWTFKLYDINGDGCISRSE 73
N V FD + NG + F++ + +S ++G +KLR+ F++YD++ DG IS E
Sbjct: 38 NPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGE 97
Query: 74 LTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEF 121
L Q+++ +M N D + ++ +D D + DG ++ EEF
Sbjct: 98 LFQVLK----MMVGNNLKDT--QLQQIVDKTIINADKDGDGRISFEEF 139
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/127 (20%), Positives = 63/127 (49%), Gaps = 24/127 (18%)
Query: 22 FKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQAV 81
FK D++ +G++S + + +L L + + +++ ++D +G+G + + + ++ V
Sbjct: 13 FKKLDLDNSGSLSVEEFM-SLPELQQNPLVQRV---IDIFDTDGNGEV---DFKEFIEGV 65
Query: 82 HELMGRKNQTDAARKAKEQ-IDFVFRKLDLNDDGVVTLEEFIESCLKV-------STQLE 133
+ + + KEQ + F FR D++ DG ++ E + LK+ TQL+
Sbjct: 66 SQF--------SVKGDKEQKLRFAFRIYDMDKDGYISNGELFQ-VLKMMVGNNLKDTQLQ 116
Query: 134 KSIESCL 140
+ ++ +
Sbjct: 117 QIVDKTI 123
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 7/108 (6%)
Query: 15 NLYAHYVFKAFDVNCNGAISFRDLLVTLSTL-LRGSIYEKLRWTFKLYDINGDGCISRSE 73
N V FD + NG + F++ + +S ++G +KLR+ F++YD++ DG IS E
Sbjct: 52 NPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGE 111
Query: 74 LTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEF 121
L Q+++ +M N D + ++ +D D + DG ++ EEF
Sbjct: 112 LFQVLK----MMVGNNLKDT--QLQQIVDKTIINADKDGDGRISFEEF 153
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/103 (20%), Positives = 52/103 (50%), Gaps = 16/103 (15%)
Query: 22 FKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQAV 81
FK D++ +G++S + + +L L + + +++ ++D +G+G + + + ++ V
Sbjct: 27 FKKLDLDNSGSLSVEEFM-SLPELQQNPLVQRV---IDIFDTDGNGEV---DFKEFIEGV 79
Query: 82 HELMGRKNQTDAARKAKEQ-IDFVFRKLDLNDDGVVTLEEFIE 123
+ + + KEQ + F FR D++ DG ++ E +
Sbjct: 80 SQF--------SVKGDKEQKLRFAFRIYDMDKDGYISNGELFQ 114
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 12/97 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQAVHELM 85
D + NG I F + L ++ ++ S E++R F+++D +G+G IS +EL ++ + E +
Sbjct: 56 DADGNGTIDFPEFLTMMARKMKDS-EEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKL 114
Query: 86 GRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFI 122
TD E++D + R+ D++ DG V EEF+
Sbjct: 115 -----TD------EEVDEMIREADIDGDGQVNYEEFV 140
Score = 32.3 bits (72), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%)
Query: 11 IRDSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCIS 70
++DS F+ FD + NG IS +L ++ L E++ + DI+GDG ++
Sbjct: 76 MKDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 135
Query: 71 RSELTQIV 78
E ++
Sbjct: 136 YEEFVTMM 143
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/90 (21%), Positives = 43/90 (47%), Gaps = 11/90 (12%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 59
Query: 113 DGVVTLEEFIESCLKVSTQLEKSIESCLKV 142
+G + EF+ + E+ I +V
Sbjct: 60 NGTIDFPEFLTMMARKMKDSEEEIREAFRV 89
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 12/99 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L ++ ++ + E++R F+++D +G+G IS +EL ++ + E
Sbjct: 357 DADGNGTIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 416
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
+ TD E++D + R+ D++ DG V EEF++
Sbjct: 417 L-----TD------EEVDEMIREADIDGDGQVNYEEFVQ 444
Score = 33.1 bits (74), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQA 80
F+ FD + NG IS +L ++ L E++ + DI+GDG ++ E Q++ A
Sbjct: 389 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 29.6 bits (65), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ + N T+A ++ + ++D +
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ-----NPTEA------ELQDMINEVDADG 360
Query: 113 DGVVTLEEFIESCLK--VSTQLEKSIESCLKV 142
+G + EF+ + T E+ I +V
Sbjct: 361 NGTIDFPEFLTMMARWMKDTDSEEEIREAFRV 392
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 12/99 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L ++ ++ + E++R F+++D +G+G IS +EL ++ + E
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEX 116
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
+ TD E++D + R+ D++ DG V EEF++
Sbjct: 117 L-----TD------EEVDEMIREADIDGDGQVNYEEFVQ 144
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
DS F+ FD + NG IS +L ++ L E++ + DI+GDG ++
Sbjct: 81 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYE 140
Query: 73 ELTQIVQA 80
E Q++ A
Sbjct: 141 EFVQMMTA 148
Score = 29.6 bits (65), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 60
Query: 113 DGVVTLEEFIESCLK--VSTQLEKSIESCLKV 142
+G + EF+ + T E+ I +V
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 92
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 12/99 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L ++ ++ + E++R F+++D +G+G IS +EL ++ + E
Sbjct: 56 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEX 115
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
+ TD E++D + R+ D++ DG V EEF++
Sbjct: 116 L-----TD------EEVDEMIREADIDGDGQVNYEEFVQ 143
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
DS F+ FD + NG IS +L ++ L E++ + DI+GDG ++
Sbjct: 80 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYE 139
Query: 73 ELTQIVQA 80
E Q++ A
Sbjct: 140 EFVQMMTA 147
Score = 29.6 bits (65), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 59
Query: 113 DGVVTLEEFIESCLK--VSTQLEKSIESCLKV 142
+G + EF+ + T E+ I +V
Sbjct: 60 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 91
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 12/99 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L ++ ++ + E++R F+++D +G+G IS +EL ++ + E
Sbjct: 54 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 113
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
+ TD E++D + R+ D++ DG V EEF++
Sbjct: 114 L-----TD------EEVDEMIREADIDGDGQVNYEEFVQ 141
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
DS F+ FD + NG IS +L ++ L E++ + DI+GDG ++
Sbjct: 78 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 137
Query: 73 ELTQIVQA 80
E Q++ A
Sbjct: 138 EFVQMMTA 145
Score = 29.6 bits (65), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 57
Query: 113 DGVVTLEEFIESCLK--VSTQLEKSIESCLKV 142
+G + EF+ + T E+ I +V
Sbjct: 58 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 89
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 12/99 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L ++ ++ + E++R F+++D +G+G IS +EL ++ + E
Sbjct: 60 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 119
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
+ TD E++D + R+ D++ DG V EEF++
Sbjct: 120 L-----TD------EEVDEMIREADIDGDGQVNYEEFVQ 147
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
DS F+ FD + NG IS +L ++ L E++ + DI+GDG ++
Sbjct: 84 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 143
Query: 73 ELTQIVQA 80
E Q++ A
Sbjct: 144 EFVQMMTA 151
Score = 29.6 bits (65), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 15 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 63
Query: 113 DGVVTLEEFIESCLK--VSTQLEKSIESCLKV 142
+G + EF+ + T E+ I +V
Sbjct: 64 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 95
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 12/99 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L ++ ++ + E++R F+++D +G+G IS +EL ++ + E
Sbjct: 357 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 416
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
+ TD E++D + R+ D++ DG V EEF++
Sbjct: 417 L-----TD------EEVDEMIREADIDGDGQVNYEEFVQ 444
Score = 33.5 bits (75), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQA 80
F+ FD + NG IS +L ++ L E++ + DI+GDG ++ E Q++ A
Sbjct: 389 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 30.0 bits (66), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ + N T+A ++ + ++D +
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ-----NPTEA------ELQDMINEVDADG 360
Query: 113 DGVVTLEEFIESCLK--VSTQLEKSIESCLKV 142
+G + EF+ + T E+ I +V
Sbjct: 361 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 392
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 12/99 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L ++ ++ + E++R F+++D +G+G IS +EL ++ + E
Sbjct: 357 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 416
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
+ TD E++D + R+ D++ DG V EEF++
Sbjct: 417 L-----TD------EEVDEMIREADIDGDGQVNYEEFVQ 444
Score = 33.5 bits (75), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQA 80
F+ FD + NG IS +L ++ L E++ + DI+GDG ++ E Q++ A
Sbjct: 389 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 30.0 bits (66), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ + N T+A ++ + ++D +
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ-----NPTEA------ELQDMINEVDADG 360
Query: 113 DGVVTLEEFIESCLK--VSTQLEKSIESCLKV 142
+G + EF+ + T E+ I +V
Sbjct: 361 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 392
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 12/99 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L ++ ++ + E++R F+++D +G+G IS +EL ++ + E
Sbjct: 358 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 417
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
+ TD E++D + R+ D++ DG V EEF++
Sbjct: 418 L-----TD------EEVDEMIREADIDGDGQVNYEEFVQ 445
Score = 33.1 bits (74), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQA 80
F+ FD + NG IS +L ++ L E++ + DI+GDG ++ E Q++ A
Sbjct: 390 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 449
Score = 30.0 bits (66), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ + N T+A ++ + ++D +
Sbjct: 313 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ-----NPTEA------ELQDMINEVDADG 361
Query: 113 DGVVTLEEFIESCLK--VSTQLEKSIESCLKV 142
+G + EF+ + T E+ I +V
Sbjct: 362 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 393
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 12/99 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L ++ ++ + E++R F+++D +G+G IS +EL ++ + E
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 116
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
+ TD E++D + R+ D++ DG V EEF++
Sbjct: 117 L-----TD------EEVDEMIREADIDGDGQVNYEEFVQ 144
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
DS F+ FD + NG IS +L ++ L E++ + DI+GDG ++
Sbjct: 81 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 73 ELTQIVQA 80
E Q++ A
Sbjct: 141 EFVQMMTA 148
Score = 29.6 bits (65), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 60
Query: 113 DGVVTLEEFIESCLK--VSTQLEKSIESCLKV 142
+G + EF+ + T E+ I +V
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 92
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 12/99 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L ++ ++ + E++R F+++D +G+G IS +EL ++ + E
Sbjct: 52 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 111
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
+ TD E++D + R+ D++ DG V EEF++
Sbjct: 112 L-----TD------EEVDEMIREADIDGDGQVNYEEFVQ 139
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
DS F+ FD + NG IS +L ++ L E++ + DI+GDG ++
Sbjct: 76 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 135
Query: 73 ELTQIVQA 80
E Q++ A
Sbjct: 136 EFVQMMTA 143
Score = 29.6 bits (65), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 55
Query: 113 DGVVTLEEFIESCLK--VSTQLEKSIESCLKV 142
+G + EF+ + T E+ I +V
Sbjct: 56 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 87
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 12/99 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L ++ ++ + E++R F+++D +G+G IS +EL ++ + E
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 116
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
+ TD E++D + R+ D++ DG V EEF++
Sbjct: 117 L-----TD------EEVDEMIREADIDGDGQVNYEEFVQ 144
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
DS F+ FD + NG IS +L ++ L E++ + DI+GDG ++
Sbjct: 81 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 73 ELTQIVQA 80
E Q++ A
Sbjct: 141 EFVQMMTA 148
Score = 29.6 bits (65), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 60
Query: 113 DGVVTLEEFIESCLK--VSTQLEKSIESCLKV 142
+G + EF+ + T E+ I +V
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 92
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 12/99 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L ++ ++ + E++R F+++D +G+G IS +EL ++ + E
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 116
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
+ TD E++D + R+ D++ DG V EEF++
Sbjct: 117 L-----TD------EEVDEMIREADIDGDGQVNYEEFVQ 144
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
DS F+ FD + NG IS +L ++ L E++ + DI+GDG ++
Sbjct: 81 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 73 ELTQIVQA 80
E Q++ A
Sbjct: 141 EFVQMMTA 148
Score = 29.6 bits (65), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 60
Query: 113 DGVVTLEEFIESCLK--VSTQLEKSIESCLKV 142
+G + EF+ + T E+ I +V
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 92
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 12/99 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L ++ ++ + E++R F+++D +G+G IS +EL ++ + E
Sbjct: 58 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 117
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
+ TD E++D + R+ D++ DG V EEF++
Sbjct: 118 L-----TD------EEVDEMIREADIDGDGQVNYEEFVQ 145
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
DS F+ FD + NG IS +L ++ L E++ + DI+GDG ++
Sbjct: 82 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 141
Query: 73 ELTQIVQA 80
E Q++ A
Sbjct: 142 EFVQMMTA 149
Score = 29.6 bits (65), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 13 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 61
Query: 113 DGVVTLEEFIESCLK--VSTQLEKSIESCLKV 142
+G + EF+ + T E+ I +V
Sbjct: 62 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 93
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 12/99 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L ++ ++ + E++R F+++D +G+G IS +EL ++ + E
Sbjct: 62 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 121
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
+ TD E++D + R+ D++ DG V EEF++
Sbjct: 122 L-----TD------EEVDEMIREADIDGDGQVNYEEFVQ 149
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
DS F+ FD + NG IS +L ++ L E++ + DI+GDG ++
Sbjct: 86 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 145
Query: 73 ELTQIVQA 80
E Q++ A
Sbjct: 146 EFVQMMTA 153
Score = 29.3 bits (64), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 17 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 65
Query: 113 DGVVTLEEFIESCLK--VSTQLEKSIESCLKV 142
+G + EF+ + T E+ I +V
Sbjct: 66 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 97
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 12/99 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L ++ ++ + E++R F+++D +G+G IS +EL ++ + E
Sbjct: 56 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 115
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
+ TD E++D + R+ D++ DG V EEF++
Sbjct: 116 L-----TD------EEVDEMIREADIDGDGQVNYEEFVQ 143
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
DS F+ FD + NG IS +L ++ L E++ + DI+GDG ++
Sbjct: 80 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Query: 73 ELTQIVQA 80
E Q++ A
Sbjct: 140 EFVQMMTA 147
Score = 29.3 bits (64), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 59
Query: 113 DGVVTLEEFIESCLK--VSTQLEKSIESCLKV 142
+G + EF+ + T E+ I +V
Sbjct: 60 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 91
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 12/99 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L ++ ++ + E++R F+++D +G+G IS +EL ++ + E
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 116
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
+ TD E++D + R+ D++ DG V EEF++
Sbjct: 117 L-----TD------EEVDQMIREADIDGDGQVNYEEFVQ 144
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
DS F+ FD + NG IS +L ++ L E++ + DI+GDG ++
Sbjct: 81 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQVNYE 140
Query: 73 ELTQIVQA 80
E Q++ A
Sbjct: 141 EFVQMMTA 148
Score = 29.3 bits (64), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 60
Query: 113 DGVVTLEEFIESCLK--VSTQLEKSIESCLKV 142
+G + EF+ + T E+ I +V
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 92
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 12/99 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L ++ ++ + E++R F+++D +G+G IS +EL ++ + E
Sbjct: 56 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 115
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
+ TD E++D + R+ D++ DG V EEF++
Sbjct: 116 L-----TD------EEVDEMIREADIDGDGQVNYEEFVQ 143
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
DS F+ FD + NG IS +L ++ L E++ + DI+GDG ++
Sbjct: 80 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Query: 73 ELTQIVQA 80
E Q++ A
Sbjct: 140 EFVQMMTA 147
Score = 29.6 bits (65), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 59
Query: 113 DGVVTLEEFIESCLK--VSTQLEKSIESCLKV 142
+G + EF+ + T E+ I +V
Sbjct: 60 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 91
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 12/99 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L ++ ++ + E++R F+++D +G+G IS +EL ++ + E
Sbjct: 323 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 382
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
+ TD E++D + R+ D++ DG V EEF++
Sbjct: 383 L-----TD------EEVDEMIREADIDGDGQVNYEEFVQ 410
Score = 33.5 bits (75), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQA 80
F+ FD + NG IS +L ++ L E++ + DI+GDG ++ E Q++ A
Sbjct: 355 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 414
Score = 29.6 bits (65), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ + N T+A ++ + ++D +
Sbjct: 278 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ-----NPTEA------ELQDMINEVDADG 326
Query: 113 DGVVTLEEFIESCLK--VSTQLEKSIESCLKV 142
+G + EF+ + T E+ I +V
Sbjct: 327 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 358
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 12/99 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L ++ ++ + E++R F+++D +G+G IS +EL ++ + E
Sbjct: 320 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 379
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
+ TD E++D + R+ D++ DG V EEF++
Sbjct: 380 L-----TD------EEVDEMIREADIDGDGQVNYEEFVQ 407
Score = 33.5 bits (75), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQA 80
F+ FD + NG IS +L ++ L E++ + DI+GDG ++ E Q++ A
Sbjct: 352 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 411
Score = 29.6 bits (65), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ + N T+A ++ + ++D +
Sbjct: 275 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ-----NPTEA------ELQDMINEVDADG 323
Query: 113 DGVVTLEEFIESCLK--VSTQLEKSIESCLKV 142
+G + EF+ + T E+ I +V
Sbjct: 324 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 355
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 12/99 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L ++ ++ + E++R F+++D +G+G IS +EL ++ + E
Sbjct: 54 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 113
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
+ TD E++D + R+ D++ DG V EEF++
Sbjct: 114 L-----TD------EEVDEMIREADIDGDGQVNYEEFVQ 141
Score = 33.9 bits (76), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
DS F+ FD + NG IS +L ++ L E++ + DI+GDG ++
Sbjct: 78 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 137
Query: 73 ELTQIV 78
E Q++
Sbjct: 138 EFVQMM 143
Score = 29.6 bits (65), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 57
Query: 113 DGVVTLEEFIESCLK--VSTQLEKSIESCLKV 142
+G + EF+ + T E+ I +V
Sbjct: 58 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 89
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 12/99 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L ++ ++ + E++R F+++D +G+G IS +EL ++ + E
Sbjct: 54 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 113
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
+ TD E++D + R+ D++ DG V EEF++
Sbjct: 114 L-----TD------EEVDEMIREADIDGDGQVNYEEFVQ 141
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
DS F+ FD + NG IS +L ++ L E++ + DI+GDG ++
Sbjct: 78 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 137
Query: 73 ELTQIVQA 80
E Q++ A
Sbjct: 138 EFVQMMTA 145
Score = 29.3 bits (64), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 57
Query: 113 DGVVTLEEFIESCLK--VSTQLEKSIESCLKV 142
+G + EF+ + T E+ I +V
Sbjct: 58 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 89
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 12/99 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L ++ ++ + E++R F+++D +G+G IS +EL ++ + E
Sbjct: 53 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 112
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
+ TD E++D + R+ D++ DG V EEF++
Sbjct: 113 L-----TD------EEVDEMIREADIDGDGQVNYEEFVQ 140
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
DS F+ FD + NG IS +L ++ L E++ + DI+GDG ++
Sbjct: 77 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 136
Query: 73 ELTQIVQA 80
E Q++ A
Sbjct: 137 EFVQMMTA 144
Score = 29.6 bits (65), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 56
Query: 113 DGVVTLEEFIESCLK--VSTQLEKSIESCLKV 142
+G + EF+ + T E+ I +V
Sbjct: 57 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 88
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 12/99 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L ++ ++ + E++R F+++D +G+G IS +EL ++ + E
Sbjct: 323 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 382
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
+ TD E++D + R+ D++ DG V EEF++
Sbjct: 383 L-----TD------EEVDEMIREADIDGDGQVNYEEFVQ 410
Score = 33.5 bits (75), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQA 80
F+ FD + NG IS +L ++ L E++ + DI+GDG ++ E Q++ A
Sbjct: 355 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 414
Score = 29.6 bits (65), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ + N T+A ++ + ++D +
Sbjct: 278 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ-----NPTEA------ELQDMINEVDADG 326
Query: 113 DGVVTLEEFIESCLK--VSTQLEKSIESCLKV 142
+G + EF+ + T E+ I +V
Sbjct: 327 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 358
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 12/99 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L ++ ++ + E++R F+++D +G+G IS +EL ++ + E
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 116
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
+ TD E++D + R+ D++ DG V EEF++
Sbjct: 117 L-----TD------EEVDEMIREADIDGDGQVNYEEFVQ 144
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
DS F+ FD + NG IS +L ++ L E++ + DI+GDG ++
Sbjct: 81 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 73 ELTQIVQA 80
E Q++ A
Sbjct: 141 EFVQMMTA 148
Score = 29.3 bits (64), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 60
Query: 113 DGVVTLEEFIESCLK--VSTQLEKSIESCLKV 142
+G + EF+ + T E+ I +V
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 92
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L ++ ++ + E++R F+++D +G+G IS +EL ++ + E
Sbjct: 55 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 114
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
+ E++D + R+ D++ DG V EEF++
Sbjct: 115 L-----------TDEEVDEMIREADIDGDGQVNYEEFVQ 142
Score = 33.9 bits (76), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
DS F+ FD + NG IS +L ++ L E++ + DI+GDG ++
Sbjct: 79 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 138
Query: 73 ELTQIV 78
E Q++
Sbjct: 139 EFVQMM 144
Score = 29.3 bits (64), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 10 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 58
Query: 113 DGVVTLEEFIESCLK--VSTQLEKSIESCLKV 142
+G + EF+ + T E+ I +V
Sbjct: 59 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 90
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 55/98 (56%), Gaps = 12/98 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L ++ ++ + E++R F+++D +G+G IS +EL ++ + E
Sbjct: 56 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK 115
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFI 122
+ TD E++D + R+ D++ DG V EEF+
Sbjct: 116 L-----TD------EEVDEMIREADIDGDGQVNYEEFV 142
Score = 31.2 bits (69), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 31/66 (46%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
DS F+ FD + NG IS +L ++ L E++ + DI+GDG ++
Sbjct: 80 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Query: 73 ELTQIV 78
E ++
Sbjct: 140 EFVTMM 145
Score = 29.6 bits (65), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 59
Query: 113 DGVVTLEEFIESCLK--VSTQLEKSIESCLKV 142
+G + EF+ + T E+ I +V
Sbjct: 60 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 91
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 55/98 (56%), Gaps = 12/98 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L ++ ++ + E++R F+++D +G+G IS +EL ++ + E
Sbjct: 56 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK 115
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFI 122
+ TD E++D + R+ D++ DG V EEF+
Sbjct: 116 L-----TD------EEVDEMIREADIDGDGQVNYEEFV 142
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 32/68 (47%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
DS F+ FD + NG IS +L ++ L E++ + DI+GDG ++
Sbjct: 80 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Query: 73 ELTQIVQA 80
E ++ A
Sbjct: 140 EFVTMMTA 147
Score = 29.6 bits (65), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 59
Query: 113 DGVVTLEEFIESCLK--VSTQLEKSIESCLKV 142
+G + EF+ + T E+ I +V
Sbjct: 60 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 91
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 55/98 (56%), Gaps = 12/98 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L ++ ++ + E++R F+++D +G+G IS +EL ++ + E
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK 116
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFI 122
+ TD E++D + R+ D++ DG V EEF+
Sbjct: 117 L-----TD------EEVDEMIREADIDGDGQVNYEEFV 143
Score = 30.8 bits (68), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 31/66 (46%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
DS F+ FD + NG IS +L ++ L E++ + DI+GDG ++
Sbjct: 81 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 73 ELTQIV 78
E ++
Sbjct: 141 EFVTMM 146
Score = 29.6 bits (65), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 60
Query: 113 DGVVTLEEFIESCLK--VSTQLEKSIESCLKV 142
+G + EF+ + T E+ I +V
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 92
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 57/99 (57%), Gaps = 12/99 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + +G I F + L+ ++ ++ + E++R F+++D +G+G IS +EL ++ + E
Sbjct: 348 DADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 407
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
+ TD E++D + R+ D++ DG V EEF++
Sbjct: 408 L-----TD------EEVDEMIREADIDGDGQVNYEEFVQ 435
Score = 34.3 bits (77), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 15/115 (13%)
Query: 11 IRDSNLYAHYVFKAFDVNCNGAI---SFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDG 67
+ D L H + + NGA+ + T L I E + F L+D +GDG
Sbjct: 259 LEDGCLVYHAQVRGVNFPSNGAVMQKKTKGWEPTRDQLTEEQIAE-FKEAFSLFDKDGDG 317
Query: 68 CISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFI 122
I+ EL +++++ + N T+A ++ + ++D + DG + EF+
Sbjct: 318 TITTKELGTVMRSLGQ-----NPTEA------ELQDMINEVDADGDGTIDFPEFL 361
Score = 33.1 bits (74), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
DS F+ FD + NG IS +L ++ L E++ + DI+GDG ++
Sbjct: 372 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 431
Query: 73 ELTQIVQA 80
E Q++ A
Sbjct: 432 EFVQMMTA 439
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 12/99 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L ++ ++ + E++R F+++D +G+G IS +EL ++ + E
Sbjct: 357 DADGNGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 416
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
+ TD E++D + R+ D++ DG V EEF++
Sbjct: 417 L-----TD------EEVDEMIREADIDGDGQVNYEEFVQ 444
Score = 33.1 bits (74), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQA 80
F+ FD + NG IS +L ++ L E++ + DI+GDG ++ E Q++ A
Sbjct: 389 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 29.6 bits (65), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ + N T+A ++ + ++D +
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ-----NPTEA------ELQDMINEVDADG 360
Query: 113 DGVVTLEEFI 122
+G + EF+
Sbjct: 361 NGTIDFPEFL 370
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 53/98 (54%), Gaps = 12/98 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L ++ ++ + E++R F+++D +G+G IS +EL ++ + E
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK 116
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFI 122
+ E++D + R+ D++ DG V EEF+
Sbjct: 117 L-----------TDEEVDEMIREADIDGDGQVNYEEFV 143
Score = 30.8 bits (68), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 31/66 (46%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
DS F+ FD + NG IS +L ++ L E++ + DI+GDG ++
Sbjct: 81 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 73 ELTQIV 78
E ++
Sbjct: 141 EFVTMM 146
Score = 29.3 bits (64), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 60
Query: 113 DGVVTLEEFIESCLK--VSTQLEKSIESCLKV 142
+G + EF+ + T E+ I +V
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 92
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 57/102 (55%), Gaps = 12/102 (11%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L ++ ++ + EKL+ F+++D +G+G IS +EL ++ + E
Sbjct: 56 DADGNGTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEK 115
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCL 126
+ TD E++D + R+ D++ DG V EEF++ +
Sbjct: 116 L-----TD------EEVDEMIREADVDGDGQVNYEEFVQVMM 146
Score = 29.3 bits (64), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 59
Query: 113 DGVVTLEEFI 122
+G + EF+
Sbjct: 60 NGTIDFPEFL 69
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 4/131 (3%)
Query: 12 RDSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTL-LRGSIYEKLRWTFKLYDINGDGCIS 70
+ +L+A VF FD NG + F + LS I +K+ ++F+LYD+ G I
Sbjct: 50 KKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIE 109
Query: 71 RSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCLKVST 130
R E+ Q+V A G N D ++ ID F + D DG + EE+ L+ +
Sbjct: 110 RQEVKQMVVATLAESGM-NLKDTV--IEDIIDKTFEEADTKHDGKIDKEEWRSLVLRHPS 166
Query: 131 QLEKSIESCLK 141
L+ LK
Sbjct: 167 LLKNMTLQYLK 177
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 12 RDSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTL-LRGSIYEKLRWTFKLYDINGDGCIS 70
+ +L+A VF FD NG + F + LS I +K+ ++F+LYD+ G I
Sbjct: 81 KKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIE 140
Query: 71 RSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEF 121
R E+ Q+V A G N D ++ ID F + D DG + EE+
Sbjct: 141 RQEVKQMVVATLAESGM-NLKDTV--IEDIIDKTFEEADTKHDGKIDKEEW 188
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 53/98 (54%), Gaps = 12/98 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L ++ ++ + E++R F+++D +G+G IS +EL ++ + E
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK 116
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFI 122
+ E++D + R+ D++ DG V EEF+
Sbjct: 117 L-----------TDEEVDEMIRESDIDGDGQVNYEEFV 143
Score = 30.8 bits (68), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 31/66 (46%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
DS F+ FD + NG IS +L ++ L E++ + DI+GDG ++
Sbjct: 81 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDIDGDGQVNYE 140
Query: 73 ELTQIV 78
E ++
Sbjct: 141 EFVTMM 146
Score = 29.6 bits (65), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 60
Query: 113 DGVVTLEEFI 122
+G + EF+
Sbjct: 61 NGTIDFPEFL 70
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 56/99 (56%), Gaps = 12/99 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + +G I F + L ++ ++ + E++R F+++D +G+G IS +EL ++ + E
Sbjct: 356 DADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 415
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
+ TD E++D + R+ D++ DG V EEF++
Sbjct: 416 L-----TD------EEVDEMIREADIDGDGQVNYEEFVQ 443
Score = 33.1 bits (74), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQA 80
F+ FD + NG IS +L ++ L E++ + DI+GDG ++ E Q++ A
Sbjct: 388 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 447
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ + N T+A ++ + ++D +
Sbjct: 311 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ-----NPTEA------ELQDMINEVDADG 359
Query: 113 DGVVTLEEFIESCLK--VSTQLEKSIESCLKV 142
DG + EF+ + T E+ I +V
Sbjct: 360 DGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 391
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 56/99 (56%), Gaps = 12/99 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + +G I F + L ++ ++ + E++R F+++D +G+G IS +EL ++ + E
Sbjct: 56 DADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 115
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
+ TD E++D + R+ D++ DG V EEF++
Sbjct: 116 L-----TD------EEVDEMIREADIDGDGQVNYEEFVQ 143
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
DS F+ FD + NG IS +L ++ L E++ + DI+GDG ++
Sbjct: 80 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Query: 73 ELTQIVQA 80
E Q++ A
Sbjct: 140 EFVQMMTA 147
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 59
Query: 113 DGVVTLEEFIESCLK--VSTQLEKSIESCLKV 142
DG + EF+ + T E+ I +V
Sbjct: 60 DGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 91
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 56/99 (56%), Gaps = 12/99 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L ++ ++ + E++R F+++D +G+G IS +EL ++ + E
Sbjct: 56 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 115
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
+ TD E++D + R+ +++ DG V EEF++
Sbjct: 116 L-----TD------EEVDEMIREANIDGDGQVNYEEFVQ 143
Score = 33.1 bits (74), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
DS F+ FD + NG IS +L ++ L E++ + +I+GDG ++
Sbjct: 80 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYE 139
Query: 73 ELTQIVQA 80
E Q++ A
Sbjct: 140 EFVQMMTA 147
Score = 29.6 bits (65), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 59
Query: 113 DGVVTLEEFIESCLK--VSTQLEKSIESCLKV 142
+G + EF+ + T E+ I +V
Sbjct: 60 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 91
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 57/102 (55%), Gaps = 12/102 (11%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L ++ ++ + E+L+ F+++D +G+G IS +EL ++ + E
Sbjct: 56 DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEK 115
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCL 126
+ TD E++D + R+ D++ DG V EEF++ +
Sbjct: 116 L-----TD------EEVDEMIREADVDGDGQVNYEEFVQVMM 146
Score = 29.3 bits (64), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 59
Query: 113 DGVVTLEEFI 122
+G + EF+
Sbjct: 60 NGTIDFPEFL 69
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 57/102 (55%), Gaps = 12/102 (11%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L ++ ++ + E+L+ F+++D +G+G IS +EL ++ + E
Sbjct: 53 DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEK 112
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCL 126
+ TD E++D + R+ D++ DG V EEF++ +
Sbjct: 113 L-----TD------EEVDEMIREADVDGDGQVNYEEFVQVMM 143
Score = 29.3 bits (64), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 56
Query: 113 DGVVTLEEFI 122
+G + EF+
Sbjct: 57 NGTIDFPEFL 66
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 56/99 (56%), Gaps = 12/99 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + +G I F + L ++ ++ + E++R F+++D +G+G IS +EL ++ + E
Sbjct: 356 DADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 415
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
+ TD E++D + R+ D++ DG V EEF++
Sbjct: 416 L-----TD------EEVDEMIREADIDGDGQVNYEEFVQ 443
Score = 34.3 bits (77), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 11/101 (10%)
Query: 22 FKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQAV 81
K D +G I L L L + + F L+D +GDG I+ EL +++++
Sbjct: 280 LKGIDFKEDGNILGHKLEYNLPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 339
Query: 82 HELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFI 122
+ N T+A ++ + ++D + DG + EF+
Sbjct: 340 GQ-----NPTEA------ELQDMINEVDADGDGTIDFPEFL 369
Score = 33.1 bits (74), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQA 80
F+ FD + NG IS +L ++ L E++ + DI+GDG ++ E Q++ A
Sbjct: 388 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 447
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 56/99 (56%), Gaps = 12/99 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + +G I F + L ++ ++ + E++R F+++D +G+G IS +EL ++ + E
Sbjct: 356 DADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 415
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
+ TD E++D + R+ D++ DG V EEF++
Sbjct: 416 L-----TD------EEVDEMIREADIDGDGQVNYEEFVQ 443
Score = 34.3 bits (77), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 11/101 (10%)
Query: 22 FKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQAV 81
K D +G I L L L + + F L+D +GDG I+ EL +++++
Sbjct: 280 LKGIDFKEDGNILGHKLEYNLPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 339
Query: 82 HELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFI 122
+ N T+A ++ + ++D + DG + EF+
Sbjct: 340 GQ-----NPTEA------ELQDMINEVDADGDGTIDFPEFL 369
Score = 33.1 bits (74), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQA 80
F+ FD + NG IS +L ++ L E++ + DI+GDG ++ E Q++ A
Sbjct: 388 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 447
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 56/99 (56%), Gaps = 12/99 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + +G I F + L ++ ++ + E++R F+++D +G+G IS +EL ++ + E
Sbjct: 357 DADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 416
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
+ TD E++D + R+ D++ DG V EEF++
Sbjct: 417 L-----TD------EEVDEMIREADIDGDGQVNYEEFVQ 444
Score = 33.1 bits (74), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQA 80
F+ FD + NG IS +L ++ L E++ + DI+GDG ++ E Q++ A
Sbjct: 389 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ + N T+A ++ + ++D +
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ-----NPTEA------ELQDMINEVDADG 360
Query: 113 DGVVTLEEFI 122
DG + EF+
Sbjct: 361 DGTIDFPEFL 370
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 10/128 (7%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQA 80
F FD + G IS ++L + L + E+L + D +G G I E +V
Sbjct: 25 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF--LV-- 80
Query: 81 VHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCLKVSTQ--LEKSIES 138
+M R+ + DA K++E+++ FR D N DG + +EE E L+ + + E+ IE
Sbjct: 81 ---MMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGE-ILRATGEHVTEEDIED 136
Query: 139 CLKVSTQN 146
+K S +N
Sbjct: 137 LMKDSDKN 144
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 15/106 (14%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLR----GSIYEKLRWTFKLYDINGDGCISRSELTQ 76
+ + D + +G I F + LV + ++ G E+L F+++D N DG I EL +
Sbjct: 61 IIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGE 120
Query: 77 IVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFI 122
I++A E + +E I+ + + D N+DG + +EF+
Sbjct: 121 ILRATGEHV-----------TEEDIEDLMKDSDKNNDGRIDFDEFL 155
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 52/96 (54%), Gaps = 12/96 (12%)
Query: 28 NCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHELMG 86
N NG ++F + ++ +R + E++R FK++D +GDG IS +EL ++ + E
Sbjct: 58 NNNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGE--- 114
Query: 87 RKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFI 122
+ E+ID + R+ D + DG++ EEF+
Sbjct: 115 --------KVTDEEIDEMIREADFDGDGMINYEEFV 142
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 10/128 (7%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQA 80
F FD + G IS ++L + L + E+L + D +G G I E
Sbjct: 25 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV---- 80
Query: 81 VHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCLKVSTQ--LEKSIES 138
+M R+ + DA K++E++ FR D N DG + +EE E L+ + + +E+ IE
Sbjct: 81 ---MMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGE-ILRATGEHVIEEDIED 136
Query: 139 CLKVSTQN 146
+K S +N
Sbjct: 137 LMKDSDKN 144
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 15/106 (14%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLR----GSIYEKLRWTFKLYDINGDGCISRSELTQ 76
+ + D + +G I F + LV + ++ G E+L F+++D N DG I EL +
Sbjct: 61 IIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGE 120
Query: 77 IVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFI 122
I++A E + +E I+ + + D N+DG + +EF+
Sbjct: 121 ILRATGEHV-----------IEEDIEDLMKDSDKNNDGRIDFDEFL 155
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 15/105 (14%)
Query: 23 KAFDVNCNGAISFRDLLVTLSTLLRGSIYE-----KLRWTFKLYDINGDGCISRSELTQI 77
+ ++N G + F D + + L + +LR F+ +D NGDG IS SEL +
Sbjct: 54 QQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREA 113
Query: 78 VQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFI 122
++A L+G + I+ + R +DLN DG V EEF+
Sbjct: 114 MRA---LLGHQ-------VGHRDIEEIIRDVDLNGDGRVDFEEFV 148
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 12/99 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I+F + L + + + E++R F+++D +G+G IS +EL + + E
Sbjct: 56 DADGNGTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEK 115
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
+ E++D R+ D++ DG V EEF++
Sbjct: 116 L-----------TDEEVDEXIREADIDGDGQVNYEEFVQ 143
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 30/68 (44%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
DS F+ FD + NG IS +L + L E++ + DI+GDG ++
Sbjct: 80 DSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYE 139
Query: 73 ELTQIVQA 80
E Q A
Sbjct: 140 EFVQXXTA 147
Score = 26.9 bits (58), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 15/93 (16%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL + +++ N T+A ++ ++D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVXRSLG-----CNPTEA------ELQDXINEVDADG 59
Query: 113 DGVVTLEEFIES---CLKVSTQLEKSIESCLKV 142
+G + EF+ C K T E+ I +V
Sbjct: 60 NGTINFPEFLTXXARCXK-DTDSEEEIREAFRV 91
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 15/105 (14%)
Query: 23 KAFDVNCNGAISFRDLLVTLSTLLRGSIYE-----KLRWTFKLYDINGDGCISRSELTQI 77
+ ++N G + F D + + L + +LR F+ +D NGDG IS SEL
Sbjct: 54 QQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELR-- 111
Query: 78 VQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFI 122
+A+ +L+G + I+ + R +DLN DG V EEF+
Sbjct: 112 -EAMRKLLGHQ-------VGHRDIEEIIRDVDLNGDGRVDFEEFV 148
Score = 26.9 bits (58), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 46/114 (40%), Gaps = 32/114 (28%)
Query: 46 LRGSIYEKLRWTFKLYDINGDGCI----------------SRSELTQIVQAVH------- 82
LR E+LR F+ +D + DG I + EL ++ Q ++
Sbjct: 5 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHV 64
Query: 83 ------ELMGRKNQTDAAR--KAKEQIDFVFRKLDLNDDGVVTLEEFIESCLKV 128
ELMG K + A KE D FR+ D N DG ++ E E+ K+
Sbjct: 65 DFDDFVELMGPKLLAETADMIGVKELRD-AFREFDTNGDGEISTSELREAMRKL 117
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 12/99 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L + + + E++R F+++D +G+G IS +EL + + E
Sbjct: 56 DADGNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEK 115
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
+ TD E++D R+ D++ DG V EEF++
Sbjct: 116 L-----TD------EEVDEXIREADIDGDGQVNYEEFVQ 143
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 30/68 (44%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
DS F+ FD + NG IS +L + L E++ + DI+GDG ++
Sbjct: 80 DSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYE 139
Query: 73 ELTQIVQA 80
E Q A
Sbjct: 140 EFVQXXTA 147
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 42/92 (45%), Gaps = 13/92 (14%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL + +++ +N T+A ++ ++D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVXRSLG-----QNPTEA------ELQDXINEVDADG 59
Query: 113 DGVVTLEEFIESCLK--VSTQLEKSIESCLKV 142
+G + EF+ + T E+ I +V
Sbjct: 60 NGTIDFPEFLTXXARKXKDTDSEEEIREAFRV 91
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 12/99 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L + + + E++R F+++D +G+G IS +EL + + E
Sbjct: 57 DADGNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEK 116
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
+ TD E++D R+ D++ DG V EEF++
Sbjct: 117 L-----TD------EEVDQXIREADIDGDGQVNYEEFVQ 144
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 30/68 (44%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
DS F+ FD + NG IS +L + L E++ + DI+GDG ++
Sbjct: 81 DSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVNYE 140
Query: 73 ELTQIVQA 80
E Q A
Sbjct: 141 EFVQXXTA 148
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 42/92 (45%), Gaps = 13/92 (14%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL + +++ +N T+A ++ ++D +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVXRSLG-----QNPTEA------ELQDXINEVDADG 60
Query: 113 DGVVTLEEFIESCLK--VSTQLEKSIESCLKV 142
+G + EF+ + T E+ I +V
Sbjct: 61 NGTIDFPEFLTXXARKXKDTDSEEEIREAFRV 92
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 15/105 (14%)
Query: 23 KAFDVNCNGAISFRDLLVTLSTLLRGSIYE-----KLRWTFKLYDINGDGCISRSELTQI 77
+ ++N G + F D + + L + +LR F+ +D NGDG IS SEL
Sbjct: 68 QQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELR-- 125
Query: 78 VQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFI 122
+A+ +L+G + I+ + R +DLN DG V EEF+
Sbjct: 126 -EAMRKLLGHQ-------VGHRDIEEIIRDVDLNGDGRVDFEEFV 162
Score = 26.9 bits (58), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 46/114 (40%), Gaps = 32/114 (28%)
Query: 46 LRGSIYEKLRWTFKLYDINGDGCI----------------SRSELTQIVQAVH------- 82
LR E+LR F+ +D + DG I + EL ++ Q ++
Sbjct: 19 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHV 78
Query: 83 ------ELMGRKNQTDAAR--KAKEQIDFVFRKLDLNDDGVVTLEEFIESCLKV 128
ELMG K + A KE D FR+ D N DG ++ E E+ K+
Sbjct: 79 DFDDFVELMGPKLLAETADMIGVKELRD-AFREFDTNGDGEISTSELREAMRKL 131
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 10/128 (7%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQA 80
F FD + G IS ++L + L + E+L + D +G G I E +V
Sbjct: 25 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF--LV-- 80
Query: 81 VHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCLKVSTQ--LEKSIES 138
+M R+ + DA K++E++ FR D N DG + +EE E L+ + + E+ IE
Sbjct: 81 ---MMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGE-ILRATGEHVTEEDIED 136
Query: 139 CLKVSTQN 146
+K S +N
Sbjct: 137 LMKDSDKN 144
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 15/106 (14%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLR----GSIYEKLRWTFKLYDINGDGCISRSELTQ 76
+ + D + +G I F + LV + ++ G E+L F+++D N DG I EL +
Sbjct: 61 IIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGE 120
Query: 77 IVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFI 122
I++A E + +E I+ + + D N+DG + +EF+
Sbjct: 121 ILRATGEHV-----------TEEDIEDLMKDSDKNNDGRIDFDEFL 155
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 8/127 (6%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQA 80
F FD + G IS ++L + L + E+L + D +G G I E +V
Sbjct: 22 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF--LV-- 77
Query: 81 VHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCLKVSTQL-EKSIESC 139
+M R+ + DA K++E++ FR D N DG + +EE E + E+ IE
Sbjct: 78 ---MMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDL 134
Query: 140 LKVSTQN 146
+K S +N
Sbjct: 135 MKDSDKN 141
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 15/106 (14%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLR----GSIYEKLRWTFKLYDINGDGCISRSELTQ 76
+ + D + +G I F + LV + ++ G E+L F+++D N DG I EL +
Sbjct: 58 IIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGE 117
Query: 77 IVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFI 122
I++A E + +E I+ + + D N+DG + +EF+
Sbjct: 118 ILRATGEHV-----------TEEDIEDLMKDSDKNNDGRIDFDEFL 152
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 10/128 (7%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQA 80
F FD + G IS ++L + L + E+L + D +G G I E +V
Sbjct: 25 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF--LV-- 80
Query: 81 VHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCLKVSTQ--LEKSIES 138
+M R+ + DA K++E++ FR D N DG + +EE E L+ + + E+ IE
Sbjct: 81 ---MMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGE-ILRATGEHVTEEDIED 136
Query: 139 CLKVSTQN 146
+K S +N
Sbjct: 137 LMKDSDKN 144
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 15/106 (14%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLR----GSIYEKLRWTFKLYDINGDGCISRSELTQ 76
+ + D + +G I F + LV + ++ G E+L F+++D N DG I EL +
Sbjct: 61 IIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGE 120
Query: 77 IVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFI 122
I++A E + +E I+ + + D N+DG + +EF+
Sbjct: 121 ILRATGEHV-----------TEEDIEDLMKDSDKNNDGRIDFDEFL 155
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 24/129 (18%)
Query: 18 AHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQI 77
A +FK D N +G++S+ ++ +S+ + L+ FK DI+G+G I +E T+
Sbjct: 2 AEALFKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKF 61
Query: 78 VQAVHE-----------LMGRKNQTDAARK-AKEQIDFVFRKL------------DLNDD 113
AV E ++ + D K KE++ F+K D N D
Sbjct: 62 AAAVKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKFGYEKVVDQIMKADANGD 121
Query: 114 GVVTLEEFI 122
G +TLEEF+
Sbjct: 122 GYITLEEFL 130
Score = 32.3 bits (72), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 11/74 (14%)
Query: 58 FKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVT 117
FK D NGDG +S E+ V + + K ++ + +F+ +D++ +G +
Sbjct: 6 FKQLDANGDGSVSYEEVKAFVSSKRPI-----------KNEQLLQLIFKAIDIDGNGEID 54
Query: 118 LEEFIESCLKVSTQ 131
L EF + V Q
Sbjct: 55 LAEFTKFAAAVKEQ 68
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 10/128 (7%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQA 80
F FD + G IS ++L + L + E+L + D +G G I E +V
Sbjct: 22 AFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEF--LV-- 77
Query: 81 VHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCLKVSTQ--LEKSIES 138
+M R+ + DA K++E++ +FR D N DG + EE E + S + ++ IES
Sbjct: 78 ---MMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAE-IFRASGEHVTDEEIES 133
Query: 139 CLKVSTQN 146
+K +N
Sbjct: 134 LMKDGDKN 141
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 15/106 (14%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLR----GSIYEKLRWTFKLYDINGDGCISRSELTQ 76
+ + D + +G I F + LV + ++ G E+L F+++D N DG I EL +
Sbjct: 58 IIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAE 117
Query: 77 IVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFI 122
I +A E + TD E+I+ + + D N+DG + +EF+
Sbjct: 118 IFRASGE-----HVTD------EEIESLMKDGDKNNDGRIDFDEFL 152
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 52/98 (53%), Gaps = 12/98 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGSI-YEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG + F + L ++ ++ + E++R F+++D +G+G +S +EL ++ + E
Sbjct: 56 DRDGNGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEK 115
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFI 122
+ + E++D + R D + DG V EEF+
Sbjct: 116 L-----------SDEEVDEMIRAADTDGDGQVNYEEFV 142
Score = 32.7 bits (73), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 38/70 (54%), Gaps = 11/70 (15%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDGCI+ EL +++++ +N T+A ++ + ++D +
Sbjct: 11 EFKEAFSLFDKDGDGCITTRELGTVMRSLG-----QNPTEA------ELRDMMSEIDRDG 59
Query: 113 DGVVTLEEFI 122
+G V EF+
Sbjct: 60 NGTVDFPEFL 69
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 53/98 (54%), Gaps = 12/98 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLR-GSIYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L ++ ++ E+L FK++D +G+G IS +EL ++ + E
Sbjct: 56 DADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEK 115
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFI 122
+ TD +++D + R+ D++ DG + EEF+
Sbjct: 116 L-----TD------DEVDEMIREADIDGDGHINYEEFV 142
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIV 78
FK FD + NG IS +L ++ L +++ + DI+GDG I+ E +++
Sbjct: 88 AFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMM 145
Score = 29.3 bits (64), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 11 EFKEAFALFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 59
Query: 113 DGVVTLEEFI 122
+G + EF+
Sbjct: 60 NGTIDFPEFL 69
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 53/98 (54%), Gaps = 12/98 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLR-GSIYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L ++ ++ E+L FK++D +G+G IS +EL ++ + E
Sbjct: 56 DADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEK 115
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFI 122
+ TD +++D + R+ D++ DG + EEF+
Sbjct: 116 L-----TD------DEVDEMIREADIDGDGHINYEEFV 142
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIV 78
FK FD + NG IS +L ++ L +++ + DI+GDG I+ E +++
Sbjct: 88 AFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMM 145
Score = 29.3 bits (64), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 11 EFKEAFALFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 59
Query: 113 DGVVTLEEFI 122
+G + EF+
Sbjct: 60 NGTIDFPEFL 69
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 57/104 (54%), Gaps = 12/104 (11%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L ++ ++ + E+L+ FK++D + +G IS SEL ++ + E
Sbjct: 56 DADGNGTIEFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEK 115
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCLKV 128
+ TD E+++ + ++ DL+ DG V EEF++ + V
Sbjct: 116 L-----TD------EEVEQMIKEADLDGDGQVNYEEFVKMMMTV 148
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 46/91 (50%), Gaps = 13/91 (14%)
Query: 54 LRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDD 113
+ F L+D +GDGCI+ EL +++++ +N T +E++ + ++D + +
Sbjct: 12 FKEAFGLFDKDGDGCITVEELATVIRSLD-----QNPT------EEELQDMISEVDADGN 60
Query: 114 GVVTLEEFIESCLK--VSTQLEKSIESCLKV 142
G + +EF+ K T E+ ++ KV
Sbjct: 61 GTIEFDEFLSLMAKKVKDTDAEEELKEAFKV 91
Score = 32.3 bits (72), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQA 80
FK FD + NG IS +L + L E++ K D++GDG ++ E +++
Sbjct: 88 AFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMT 147
Query: 81 V 81
V
Sbjct: 148 V 148
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 10/70 (14%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+LR F+ +D NGDG IS SEL +A+ +L+G + I+ + R +DLN
Sbjct: 8 ELRDAFREFDTNGDGEISTSELR---EAMRKLLGHQ-------VGHRDIEEIIRDVDLNG 57
Query: 113 DGVVTLEEFI 122
DG V EEF+
Sbjct: 58 DGRVDFEEFV 67
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 6/111 (5%)
Query: 14 SNLYAHYVFKAFDVN-CNGAISFRDLLVTLSTLLRGSIYE-KLRWTFKLYDINGDGCISR 71
+N + + + F + ++SF D L LS + + K + F+++D + DG ++R
Sbjct: 89 ANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNR 148
Query: 72 SELTQIVQAVHELMGRKNQTD-AARKAKEQIDFVFRKLDLNDDGVVTLEEF 121
+L+++V L G T +A + K+ ID + + D++ DG + L EF
Sbjct: 149 EDLSRLVNC---LTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEF 196
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 6/111 (5%)
Query: 14 SNLYAHYVFKAFDVN-CNGAISFRDLLVTLSTLLRGSIYE-KLRWTFKLYDINGDGCISR 71
+N + + + F + ++SF D L LS + + K + F+++D + DG ++R
Sbjct: 58 ANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNR 117
Query: 72 SELTQIVQAVHELMGRKNQTD-AARKAKEQIDFVFRKLDLNDDGVVTLEEF 121
+L+++V L G T +A + K+ ID + + D++ DG + L EF
Sbjct: 118 EDLSRLVNC---LTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEF 165
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 15/106 (14%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLR----GSIYEKLRWTFKLYDINGDGCISRSELTQ 76
+ + D + +G I F + LV + ++ G E+L F+++D N DG I EL +
Sbjct: 58 IIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAE 117
Query: 77 IVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFI 122
I +A E + TD E+I+ + + D N+DG + +EF+
Sbjct: 118 IFRASGEHV-----TD------EEIESLMKDGDKNNDGRIDFDEFL 152
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 46/99 (46%), Gaps = 16/99 (16%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F ++D +G G IS EL +++ + QT KE++D + ++D +
Sbjct: 18 EFKAAFDMFDADGGGDISVKELGTVMRML-------GQT----PTKEELDAIIEEVDEDG 66
Query: 113 DGVVTLEEFIESCLK-----VSTQLEKSIESCLKVSTQN 146
G + EEF+ ++ + E+ + C ++ +N
Sbjct: 67 SGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRN 105
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 15/107 (14%)
Query: 19 HYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEK--LRWTFKLYDINGDGCISRSELTQ 76
H V + D N +G I + D L +T+ + + +K FK +DI+G+G IS EL +
Sbjct: 96 HQVLRDIDSNASGQIHYTDFLA--ATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKR 153
Query: 77 IVQAVHELMGRKN-QTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFI 122
I GR + + KA ID + +++DLN DG + EF+
Sbjct: 154 I-------FGRDDIENPLIDKA---IDSLLQEVDLNGDGEIDFHEFM 190
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 54/98 (55%), Gaps = 12/98 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L ++ ++ + E+L+ F+++D + +G IS +EL ++ + E
Sbjct: 57 DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEK 116
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFI 122
+ TD E++D + R+ D++ DG + EEF+
Sbjct: 117 L-----TD------EEVDEMIREADVDGDGQINYEEFV 143
Score = 32.7 bits (73), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 38/70 (54%), Gaps = 11/70 (15%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDGCI+ EL +++++ +N T+A ++ + ++D +
Sbjct: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 60
Query: 113 DGVVTLEEFI 122
+G + EF+
Sbjct: 61 NGTIDFPEFL 70
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGSIYEK-LRWTFKLYDINGDGCISRSELTQIVQAVHE 83
DV+ N AI F + L +S L+ + E+ L FK++D NGDG IS +EL ++ ++ E
Sbjct: 57 DVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGE 115
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGSIYEK-LRWTFKLYDINGDGCISRSELTQIVQAVHE 83
DV+ N I F + L +S L+ + E+ L FK++D NGDG IS +EL ++ ++ E
Sbjct: 56 DVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGE 114
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGSIYEK-LRWTFKLYDINGDGCISRSELTQIVQAVHE 83
DV+ N I F + L +S L+ + E+ L FK++D NGDG IS +EL ++ ++ E
Sbjct: 56 DVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGE 114
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 53/97 (54%), Gaps = 13/97 (13%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGSIYEK-LRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
DV+ N I F + L +S L+ + E+ L FK++D NGDG IS +EL ++ ++ E
Sbjct: 57 DVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEK 116
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEF 121
+ TDA ++D + R++ + G + +++F
Sbjct: 117 L-----TDA------EVDDMLREVS-DGSGEINIQQF 141
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 54/98 (55%), Gaps = 12/98 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D + NG I F + L ++ ++ + E+L+ F+++D + +G IS +EL ++ + E
Sbjct: 57 DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEK 116
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFI 122
+ TD E++D + R+ D++ DG + +EF+
Sbjct: 117 L-----TD------EEVDEMIREADVDGDGQINYDEFV 143
Score = 32.7 bits (73), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 38/70 (54%), Gaps = 11/70 (15%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDGCI+ EL +++++ +N T+A ++ + ++D +
Sbjct: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 60
Query: 113 DGVVTLEEFI 122
+G + EF+
Sbjct: 61 NGTIDFPEFL 70
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 24/133 (18%)
Query: 18 AHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQI 77
A +FK DVN +GA+S+ ++ +S + L+ FK D +G+G I ++E +
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 78 VQAVH-----------ELMGRKNQTDAARK-AKEQIDFVFR------------KLDLNDD 113
++ +++ + D K KE++ F+ K D N D
Sbjct: 62 YGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKADANGD 121
Query: 114 GVVTLEEFIESCL 126
G +TLEEF+E L
Sbjct: 122 GYITLEEFLEFSL 134
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 24/133 (18%)
Query: 18 AHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQI 77
A +FK DVN +GA+S+ ++ +S + L+ FK D +G+G I ++E +
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 78 VQAVH-----------ELMGRKNQTDAARK-AKEQIDFVFR------------KLDLNDD 113
++ +++ + D K KE++ F+ K D N D
Sbjct: 62 YGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKADANGD 121
Query: 114 GVVTLEEFIESCL 126
G +TLEEF+E L
Sbjct: 122 GYITLEEFLEFSL 134
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 11/72 (15%)
Query: 52 EKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLN 111
E++R F+++D +G+G IS +EL ++ + E + TD E++D + R+ D++
Sbjct: 9 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-----TD------EEVDEMIREADID 57
Query: 112 DDGVVTLEEFIE 123
DG V EEF++
Sbjct: 58 GDGQVNYEEFVQ 69
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
DS F+ FD + NG IS +L ++ L E++ + DI+GDG ++
Sbjct: 6 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 65
Query: 73 ELTQIVQA 80
E Q++ A
Sbjct: 66 EFVQMMTA 73
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 58 FKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVT 117
FK D NGDG + + EL ++ + L KN+ + +E++D + +++D + +G +
Sbjct: 361 FKKLDKNGDGQLDKKEL---IEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIE 417
Query: 118 LEEFIESCL 126
EFI C+
Sbjct: 418 YSEFISVCM 426
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 15/109 (13%)
Query: 21 VFKAFDVNCNGAISFRDLL-VTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQ 79
+ K D + NG I + + + V + + S E+LR F L+D + G I++ EL +
Sbjct: 404 ILKEVDFDKNGYIEYSEFISVCMDKQILFS-EERLRRAFNLFDTDKSGKITKEELANLFG 462
Query: 80 AVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCLKV 128
+ K D +A D N D ++ +EF+ K+
Sbjct: 463 LTS--ISEKTWNDVLGEA-----------DQNKDNMIDFDEFVSMMHKI 498
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 11/72 (15%)
Query: 52 EKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLN 111
E++R F+++D +G+G IS +EL ++ + E + TD E++D + R+ D++
Sbjct: 5 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-----TD------EEVDEMIREADID 53
Query: 112 DDGVVTLEEFIE 123
DG V EEF++
Sbjct: 54 GDGQVNYEEFVQ 65
Score = 34.7 bits (78), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
DS F+ FD + NG IS +L ++ L E++ + DI+GDG ++
Sbjct: 2 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 73 ELTQIVQA 80
E Q++ A
Sbjct: 62 EFVQMMTA 69
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 11/72 (15%)
Query: 52 EKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLN 111
E++R F+++D +G+G IS +EL ++ + E + TD E++D + R+ D++
Sbjct: 8 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-----TD------EEVDEMIREADID 56
Query: 112 DDGVVTLEEFIE 123
DG V EEF++
Sbjct: 57 GDGQVNYEEFVQ 68
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
DS F+ FD + NG IS +L ++ L E++ + DI+GDG ++
Sbjct: 5 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 64
Query: 73 ELTQIVQA 80
E Q++ A
Sbjct: 65 EFVQMMTA 72
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 11/72 (15%)
Query: 52 EKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLN 111
E++R F+++D +G+G IS +EL ++ + E + TD E++D + R+ D++
Sbjct: 2 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-----TD------EEVDEMIREADID 50
Query: 112 DDGVVTLEEFIE 123
DG V EEF++
Sbjct: 51 GDGQVNYEEFVQ 62
Score = 34.3 bits (77), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQA 80
F+ FD + NG IS +L ++ L E++ + DI+GDG ++ E Q++ A
Sbjct: 7 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 66
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 11/72 (15%)
Query: 52 EKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLN 111
E++R F+++D +G+G IS +EL ++ + E + TD E++D + R+ D++
Sbjct: 6 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-----TD------EEVDEMIREADID 54
Query: 112 DDGVVTLEEFIE 123
DG V EEF++
Sbjct: 55 GDGQVNYEEFVQ 66
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
DS F+ FD + NG IS +L ++ L E++ + DI+GDG ++
Sbjct: 3 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 62
Query: 73 ELTQIVQA 80
E Q++ A
Sbjct: 63 EFVQMMTA 70
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 11/72 (15%)
Query: 52 EKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLN 111
E++R F+++D +G+G IS +EL ++ + E + TD E++D + R+ D++
Sbjct: 5 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-----TD------EEVDEMIREADID 53
Query: 112 DDGVVTLEEFIE 123
DG V EEF++
Sbjct: 54 GDGQVNYEEFVQ 65
Score = 33.5 bits (75), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
DS F+ FD + NG IS +L ++ L E++ + DI+GDG ++
Sbjct: 2 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 73 ELTQIV 78
E Q++
Sbjct: 62 EFVQMM 67
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 15/102 (14%)
Query: 26 DVNCNGAISFRDLLVTLSTLLR----GSIYEKLRWTFKLYDINGDGCISRSELTQIVQAV 81
D + +G + F + LV + ++ G E+L F+++D N DG I EL ++QA
Sbjct: 65 DEDGSGTVDFDEFLVMMVRSMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQAT 124
Query: 82 HELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
E + ++ I+ + + D N+DG + +EF+E
Sbjct: 125 GETI-----------TEDDIEELMKDGDKNNDGRIDYDEFLE 155
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 14/129 (10%)
Query: 24 AFDVNC----NGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQ 79
AFD+ +G+IS ++L + L + E+L+ D +G G + E +V
Sbjct: 23 AFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF--LV- 79
Query: 80 AVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCLKVS--TQLEKSIE 137
+M R + D+ K +E++ +FR D N DG + LEE ++ L+ + T E IE
Sbjct: 80 ----MMVRSMKDDSKGKTEEELSDLFRMFDKNADGYIDLEE-LKIMLQATGETITEDDIE 134
Query: 138 SCLKVSTQN 146
+K +N
Sbjct: 135 ELMKDGDKN 143
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 15/102 (14%)
Query: 26 DVNCNGAISFRDLLVTLSTLLR----GSIYEKLRWTFKLYDINGDGCISRSELTQIVQAV 81
D + +G + F + LV + ++ G E+L F+++D N DG I EL ++QA
Sbjct: 65 DEDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQAT 124
Query: 82 HELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
E + ++ I+ + + D N+DG + +EF+E
Sbjct: 125 GETI-----------TEDDIEELMKDGDKNNDGRIDYDEFLE 155
Score = 34.7 bits (78), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 57/133 (42%), Gaps = 22/133 (16%)
Query: 24 AFDVNCNGA----ISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQ 79
AFD+ GA IS ++L + L + E+L+ D +G G + E
Sbjct: 23 AFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLV--- 79
Query: 80 AVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCLKVSTQL------E 133
+M R + D+ K +E++ +FR D N DG + LEE LK+ Q E
Sbjct: 80 ----MMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEE-----LKIMLQATGETITE 130
Query: 134 KSIESCLKVSTQN 146
IE +K +N
Sbjct: 131 DDIEELMKDGDKN 143
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 14/88 (15%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQI----DFVFRKL 108
KL + F+LYD++ DG ISR E+ Q+++ ++G + +EQ+ D ++
Sbjct: 115 KLHYAFQLYDLDRDGKISRHEMLQVLRL---MVG-------VQVTEEQLENIADRTVQEA 164
Query: 109 DLNDDGVVTLEEFIESCLKVSTQLEKSI 136
D + DG V+ EF +S K+ + + SI
Sbjct: 165 DEDGDGAVSFVEFTKSLEKMDVEQKMSI 192
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 15/102 (14%)
Query: 26 DVNCNGAISFRDLLVTLSTLLR----GSIYEKLRWTFKLYDINGDGCISRSELTQIVQAV 81
D + +G + F + LV + ++ G E+L F+++D N DG I EL ++QA
Sbjct: 65 DEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQAT 124
Query: 82 HELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
E + ++ I+ + + D N+DG + +EF+E
Sbjct: 125 GETI-----------TEDDIEELMKDGDKNNDGRIDYDEFLE 155
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 14/129 (10%)
Query: 24 AFDVNC----NGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQ 79
AFD+ +G+IS ++L + L + E+L+ D +G G + E +V
Sbjct: 23 AFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF--LV- 79
Query: 80 AVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCLKVS--TQLEKSIE 137
+M R + D+ K++E++ +FR D N DG + LEE ++ L+ + T E IE
Sbjct: 80 ----MMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEE-LKIMLQATGETITEDDIE 134
Query: 138 SCLKVSTQN 146
+K +N
Sbjct: 135 ELMKDGDKN 143
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 15/73 (20%)
Query: 54 LRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDD 113
L+ +KL D++GDG +++ E+T + K EQ+ K D N D
Sbjct: 7 LKVLYKLMDVDGDGKLTKEEVTSFFK-----------KHGIEKVAEQV----MKADANGD 51
Query: 114 GVVTLEEFIESCL 126
G +TLEEF+E L
Sbjct: 52 GYITLEEFLEFSL 64
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 15/102 (14%)
Query: 26 DVNCNGAISFRDLLVTLSTLLR----GSIYEKLRWTFKLYDINGDGCISRSELTQIVQAV 81
D + +G + F + LV + ++ G E+L F+++D N DG I EL ++QA
Sbjct: 65 DEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDELKIMLQAT 124
Query: 82 HELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
E + ++ I+ + + D N+DG + +EF+E
Sbjct: 125 GETI-----------TEDDIEELMKDGDKNNDGRIDYDEFLE 155
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 14/129 (10%)
Query: 24 AFDVNC----NGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQ 79
AFD+ +G+IS ++L + L + E+L+ D +G G + E +V
Sbjct: 23 AFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF--LV- 79
Query: 80 AVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCLKVS--TQLEKSIE 137
+M R + D+ K++E++ +FR D N DG + L+E ++ L+ + T E IE
Sbjct: 80 ----MMVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDE-LKIMLQATGETITEDDIE 134
Query: 138 SCLKVSTQN 146
+K +N
Sbjct: 135 ELMKDGDKN 143
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 52/98 (53%), Gaps = 12/98 (12%)
Query: 27 VNCNGAISFRDLLVTLSTLLRGS-IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHELM 85
+ NG I F L ++ ++ + E++R F+++ +G+G IS ++L ++ + E +
Sbjct: 358 ADGNGTIDFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKL 417
Query: 86 GRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
TD E++D + R+ ++ DG V E+F++
Sbjct: 418 -----TD------EEVDEMIREAGIDGDGQVNYEQFVQ 444
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 11/72 (15%)
Query: 52 EKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLN 111
E++R F++ D +G+G IS +EL ++ + E + TD E++D + R+ D++
Sbjct: 29 EEIREAFRVEDKDGNGYISAAELRHVMTNLGEKL-----TD------EEVDEMIREADID 77
Query: 112 DDGVVTLEEFIE 123
DG V EEF++
Sbjct: 78 GDGQVNYEEFVQ 89
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 32/68 (47%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
DS F+ D + NG IS +L ++ L E++ + DI+GDG ++
Sbjct: 26 DSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 85
Query: 73 ELTQIVQA 80
E Q++ A
Sbjct: 86 EFVQMMTA 93
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 11/71 (15%)
Query: 52 EKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLN 111
E++R FK++D +G+G IS+ EL A+ L N+ +++ + ++LD++
Sbjct: 36 EEIREAFKVFDRDGNGFISKQELG---TAMRSLGYMPNEV--------ELEVIIQRLDMD 84
Query: 112 DDGVVTLEEFI 122
DG V EEF+
Sbjct: 85 GDGQVDFEEFV 95
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 41/72 (56%), Gaps = 11/72 (15%)
Query: 52 EKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLN 111
E++R F+++D +G+G IS ++L ++ + E + E++D + R+ D++
Sbjct: 7 EEIREAFRVFDKDGNGYISAADLRHVMTNLGEKL-----------TDEEVDEMIREADID 55
Query: 112 DDGVVTLEEFIE 123
DG V E+F++
Sbjct: 56 GDGQVNYEDFVQ 67
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 13 DSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRS 72
DS F+ FD + NG IS DL ++ L E++ + DI+GDG ++
Sbjct: 4 DSEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 63
Query: 73 ELTQIVQA 80
+ Q++ A
Sbjct: 64 DFVQMMTA 71
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 15/102 (14%)
Query: 26 DVNCNGAISFRDLLVTLSTLLR----GSIYEKLRWTFKLYDINGDGCISRSELTQIVQAV 81
D + +G + F + LV + ++ G E+L F++ D N DG I EL ++QA
Sbjct: 65 DEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDELKIMLQAT 124
Query: 82 HELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
E + ++ I+ + + D N+DG + +EF+E
Sbjct: 125 GETI-----------TEDDIEELMKDGDKNNDGRIDYDEFLE 155
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 14/129 (10%)
Query: 24 AFDVNC----NGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQ 79
AFD+ +G+IS ++L + L + E+L+ D +G G + E +V
Sbjct: 23 AFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF--LV- 79
Query: 80 AVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCLKVS--TQLEKSIE 137
+M R + D+ K++E++ +FR D N DG + L+E ++ L+ + T E IE
Sbjct: 80 ----MMVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDE-LKIMLQATGETITEDDIE 134
Query: 138 SCLKVSTQN 146
+K +N
Sbjct: 135 ELMKDGDKN 143
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 10/90 (11%)
Query: 46 LRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVF 105
+R E++ FK++D NGDG I E I+Q V G + TDA +++
Sbjct: 2 VRQDDEEEILRAFKVFDANGDGVIDFDEFKFIMQKV----GEEPLTDA------EVEEAM 51
Query: 106 RKLDLNDDGVVTLEEFIESCLKVSTQLEKS 135
++ D + +GV+ + EF++ K L++S
Sbjct: 52 KEADEDGNGVIDIPEFMDLIKKSKNALKES 81
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLRGSI-YEKLRWTFKLYDINGDGCISRSELTQIVQ 79
+FK FD N +G IS +L L TL GS+ +++R D +GDG IS E T +
Sbjct: 16 IFKRFDTNGDGKISSSELGDALKTL--GSVTPDEVRRMMAEIDTDGDGFISFDEFTDFAR 73
Query: 80 AVHELM 85
A L+
Sbjct: 74 ANRGLV 79
Score = 32.7 bits (73), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 12/66 (18%)
Query: 58 FKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVT 117
FK +D NGDG IS SEL ++ + + D R+ +I D + DG ++
Sbjct: 17 FKRFDTNGDGKISSSELGDALKTLGSVT-----PDEVRRMMAEI-------DTDGDGFIS 64
Query: 118 LEEFIE 123
+EF +
Sbjct: 65 FDEFTD 70
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 16/103 (15%)
Query: 25 FDVNCNGAISFRDLLVTLSTLLRGSI-----YEKLRWTFKLYDINGDGCISRSELTQIVQ 79
FD NG I F + + L + ++LR F+LYD G+G IS + +I+
Sbjct: 59 FDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILA 118
Query: 80 AVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFI 122
+ E + + E +D + ++D + G V EEF+
Sbjct: 119 ELDETL-----------SSEDLDAMIDEIDADGSGTVDFEEFM 150
>pdb|2SAS|A Chain A, Structure Of A Sarcoplasmic Calcium-Binding Protein From
Amphioxus Refined At 2.4 Angstroms Resolution
Length = 185
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 18/128 (14%)
Query: 20 YVFKAF-DVNCNGAI---SFRDLLVTLSTLLRGSI----YEKLRWTFK--------LYDI 63
+ F F D+N +G+I F D++ + +GS+ Y+ ++ + + DI
Sbjct: 12 FTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADI 71
Query: 64 NGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
N D +S E + + + K+ D + +I F+F+ +D++ DG+V LEEF
Sbjct: 72 NKDDVVSWEEYLAMWEKT--IATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQN 129
Query: 124 SCLKVSTQ 131
C Q
Sbjct: 130 YCKNFQLQ 137
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLRGSI-YEKLRWTFKLYDINGDGCISRSELTQIVQ 79
+FK FD N +G IS +L L TL GSI ++++ D +GDG IS E T +
Sbjct: 14 IFKRFDANGDGKISAAELGEALKTL--GSITPDEVKHMMAEIDTDGDGFISFQEFTDFGR 71
Query: 80 AVHELM 85
A L+
Sbjct: 72 ANRGLL 77
Score = 33.1 bits (74), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 12/66 (18%)
Query: 58 FKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVT 117
FK +D NGDG IS +EL + ++ + + +++ + ++D + DG ++
Sbjct: 15 FKRFDANGDGKISAAELGEALKTLGSIT------------PDEVKHMMAEIDTDGDGFIS 62
Query: 118 LEEFIE 123
+EF +
Sbjct: 63 FQEFTD 68
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 11/77 (14%)
Query: 52 EKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLN 111
E+L+ FK++D + +G IS SEL ++ + E + TD E+++ + ++ DL+
Sbjct: 4 EELKEAFKVFDKDQNGYISASELRHVMINLGEKL-----TD------EEVEQMIKEADLD 52
Query: 112 DDGVVTLEEFIESCLKV 128
DG V EEF++ + V
Sbjct: 53 GDGQVNYEEFVKMMMTV 69
Score = 33.1 bits (74), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQA 80
FK FD + NG IS +L + L E++ K D++GDG ++ E +++
Sbjct: 9 AFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMT 68
Query: 81 V 81
V
Sbjct: 69 V 69
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 52 EKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLN 111
E L+ F+ +D +GDG I+ EL + + + + + +E++D + R+ D++
Sbjct: 6 EDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPL-----------PQEELDAMIREADVD 54
Query: 112 DDGVVTLEEF 121
DG V EEF
Sbjct: 55 QDGRVNYEEF 64
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 11/71 (15%)
Query: 52 EKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLN 111
E+L FK++D +G+G IS +EL ++ + E + TD +++D + R+ D++
Sbjct: 8 EELIEAFKVFDRDGNGLISAAELRHVMTNLGEKL-----TD------DEVDEMIREADID 56
Query: 112 DDGVVTLEEFI 122
DG + EEF+
Sbjct: 57 GDGHINYEEFV 67
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIV 78
FK FD + NG IS +L ++ L +++ + DI+GDG I+ E +++
Sbjct: 13 AFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMM 70
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 14/96 (14%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQI----DFVFRKL 108
KL + F+LYD++ D ISR EL Q+++ +M N +D EQ+ D ++
Sbjct: 114 KLHFAFRLYDLDKDDKISRDELLQVLR----MMVGVNISD------EQLGSIADRTIQEA 163
Query: 109 DLNDDGVVTLEEFIESCLKVSTQLEKSIESCLKVST 144
D + D ++ EF++ KV + + SI K++
Sbjct: 164 DQDGDSAISFTEFVKVLEKVDVEQKMSIRFLHKLAA 199
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 11/77 (14%)
Query: 52 EKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLN 111
E+L+ FK++D + +G IS SEL ++ + E + TD E+++ + ++ DL+
Sbjct: 9 EELKEAFKVFDKDQNGYISASELRHVMINLGEKL-----TD------EEVEQMIKEADLD 57
Query: 112 DDGVVTLEEFIESCLKV 128
DG V EEF++ + V
Sbjct: 58 GDGQVNYEEFVKMMMTV 74
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQA 80
FK FD + NG IS +L + L E++ K D++GDG ++ E +++
Sbjct: 14 AFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMT 73
Query: 81 V 81
V
Sbjct: 74 V 74
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 53/101 (52%), Gaps = 15/101 (14%)
Query: 25 FDVNCNGAISFRDLLVTL--STLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQAVH 82
D++ +G+I + + + + T+L E++ FK++D +G G IS EL ++
Sbjct: 390 LDMDGSGSIEYSEFIASAIDRTILLSR--ERMERAFKMFDKDGSGKISTKELFKLF---- 443
Query: 83 ELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
+Q D++ + E+++ + ++D N DG V EF+E
Sbjct: 444 ------SQADSSIQM-EELESIIEQVDNNKDGEVDFNEFVE 477
Score = 34.7 bits (78), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 9/81 (11%)
Query: 52 EKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQ------TDAARKAKEQIDFVF 105
++L F+ D N DG + R EL V+ HE M K + ++QID +
Sbjct: 331 KQLTEIFRKLDTNNDGMLDRDEL---VRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLM 387
Query: 106 RKLDLNDDGVVTLEEFIESCL 126
LD++ G + EFI S +
Sbjct: 388 PLLDMDGSGSIEYSEFIASAI 408
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQ 79
FK FD + +G IS ++L S E+L + D N DG + +E +++Q
Sbjct: 422 AFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQ 480
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 14/129 (10%)
Query: 24 AFDVNC----NGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQ 79
AFD+ +G+IS ++L + L + E+L+ D +G G + E +V
Sbjct: 23 AFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF--LV- 79
Query: 80 AVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCLKVS--TQLEKSIE 137
+M R + D+ K++E++ +FR D N DG + L+E ++ L+ + T E IE
Sbjct: 80 ----MMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDE-LKIMLQATGETITEDDIE 134
Query: 138 SCLKVSTQN 146
+K +N
Sbjct: 135 ELMKDGDKN 143
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 12/76 (15%)
Query: 50 IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLD 109
+ + + FK +D NGDG IS SELT ++ + + +++ + ++D
Sbjct: 1 MADDMERIFKRFDTNGDGKISLSELTDALRTL------------GSTSADEVQRMMAEID 48
Query: 110 LNDDGVVTLEEFIESC 125
+ DG + EFI C
Sbjct: 49 TDGDGFIDFNEFISFC 64
Score = 34.7 bits (78), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQA 80
+FK FD N +G IS +L L TL S E R ++ D +GDG I +E A
Sbjct: 8 IFKRFDTNGDGKISLSELTDALRTLGSTSADEVQRMMAEI-DTDGDGFIDFNEFISFCNA 66
Query: 81 VHELM 85
LM
Sbjct: 67 NPGLM 71
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 14/129 (10%)
Query: 24 AFDVNC----NGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQ 79
AFD+ +G+IS ++L + L + E+L+ D +G G + E +V
Sbjct: 23 AFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF--LV- 79
Query: 80 AVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCLKVS--TQLEKSIE 137
+M R + D+ K++E++ +FR D N DG + L+E ++ L+ + T E IE
Sbjct: 80 ----MMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDE-LKIMLQATGETITEDDIE 134
Query: 138 SCLKVSTQN 146
+K +N
Sbjct: 135 ELMKDGDKN 143
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 14/88 (15%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQI----DFVFRKL 108
KL + F+LYD++ D ISR EL Q+++ +M N +D EQ+ D ++
Sbjct: 114 KLHFAFRLYDLDKDEKISRDELLQVLR----MMVGVNISD------EQLGSIADRTIQEA 163
Query: 109 DLNDDGVVTLEEFIESCLKVSTQLEKSI 136
D + D ++ EF++ KV + + SI
Sbjct: 164 DQDGDSAISFTEFVKVLEKVDVEQKMSI 191
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 12/74 (16%)
Query: 52 EKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLN 111
+ + FK +D NGDG IS SELT ++ + + +++ + ++D +
Sbjct: 2 DDMERIFKRFDTNGDGKISLSELTDALRTL------------GSTSADEVQRMMAEIDTD 49
Query: 112 DDGVVTLEEFIESC 125
DG + EFI C
Sbjct: 50 GDGFIDFNEFISFC 63
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQA 80
+FK FD N +G IS +L L TL S E R ++ D +GDG I +E A
Sbjct: 7 IFKRFDTNGDGKISLSELTDALRTLGSTSADEVQRMMAEI-DTDGDGFIDFNEFISFCNA 65
Query: 81 VHELM 85
LM
Sbjct: 66 NPGLM 70
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 11/78 (14%)
Query: 46 LRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVF 105
++G E+L F+++D N DG I EL ++QA E + ++ I+ +
Sbjct: 1 MKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETI-----------TEDDIEELM 49
Query: 106 RKLDLNDDGVVTLEEFIE 123
+ D N+DG + +EF+E
Sbjct: 50 KDGDKNNDGRIDYDEFLE 67
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 43/75 (57%), Gaps = 11/75 (14%)
Query: 52 EKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLN 111
E+L+ F+++D + +G IS +EL ++ + E + TD E++D + R+ D++
Sbjct: 4 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL-----TD------EEVDEMIREADVD 52
Query: 112 DDGVVTLEEFIESCL 126
DG + EEF++ +
Sbjct: 53 GDGQINYEEFVKVMM 67
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 11/77 (14%)
Query: 47 RGSIYEKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFR 106
+G E+L F+++D N DG I EL ++QA E + ++ I+ + +
Sbjct: 5 KGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETI-----------TEDDIEELMK 53
Query: 107 KLDLNDDGVVTLEEFIE 123
D N+DG + +EF+E
Sbjct: 54 DGDKNNDGRIDYDEFLE 70
Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 90 QTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCLKVSTQ--LEKSIESCLKVSTQN 146
+ D+ K +E++ +FR D N DG + LEE ++ L+ + + E IE +K +N
Sbjct: 1 KDDSKGKTEEELSDLFRMFDKNADGYIDLEE-LKIMLQATGETITEDDIEELMKDGDKN 58
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 11/77 (14%)
Query: 47 RGSIYEKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFR 106
+G E+L F+++D N DG I EL ++QA E + ++ I+ + +
Sbjct: 10 KGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETI-----------TEDDIEELMK 58
Query: 107 KLDLNDDGVVTLEEFIE 123
D N+DG + +EF+E
Sbjct: 59 DGDKNNDGRIDYDEFLE 75
Score = 27.3 bits (59), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 11/63 (17%)
Query: 90 QTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCLKVSTQL------EKSIESCLKVS 143
+ D+ K +E++ +FR D N DG + LEE LK+ Q E IE +K
Sbjct: 6 KDDSKGKTEEELSDLFRMFDKNADGYIDLEE-----LKIMLQATGETITEDDIEELMKDG 60
Query: 144 TQN 146
+N
Sbjct: 61 DKN 63
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Query: 38 LLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDA---A 94
LL S L ++L F D NGDG + R+EL ++ ELM K Q + A
Sbjct: 344 LLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAEL---IEGYKELMRMKGQDASMLDA 400
Query: 95 RKAKEQIDFVFRKLDLNDDGVVTLEEFIESCLKVSTQLEK 134
+ ++D V +D + +G + EF+ + T L +
Sbjct: 401 SAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSR 440
Score = 33.1 bits (74), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 19/111 (17%)
Query: 21 VFKAFDVNCNGAISFRDLLVTL---STLLRGSIYEKLRWTFKLYDINGDGCISRSELTQI 77
V A D + NG I + + + TLL E+L F+++D + G IS +EL I
Sbjct: 410 VLDAVDFDKNGYIEYSEFVTVAMDRKTLLS---RERLERAFRMFDSDNSGKISSTELATI 466
Query: 78 VQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCLKV 128
+ D+ E V ++D N+DG V +EF + LK+
Sbjct: 467 FGV--------SDVDS-----ETWKSVLSEVDKNNDGEVDFDEFQQMLLKL 504
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Query: 38 LLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDA---A 94
LL S L ++L F D NGDG + R+EL ++ ELM K Q + A
Sbjct: 345 LLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAEL---IEGYKELMRMKGQDASMLDA 401
Query: 95 RKAKEQIDFVFRKLDLNDDGVVTLEEFIESCLKVSTQLEK 134
+ ++D V +D + +G + EF+ + T L +
Sbjct: 402 SAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSR 441
Score = 33.1 bits (74), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 19/111 (17%)
Query: 21 VFKAFDVNCNGAISFRDLLVTL---STLLRGSIYEKLRWTFKLYDINGDGCISRSELTQI 77
V A D + NG I + + + TLL E+L F+++D + G IS +EL I
Sbjct: 411 VLDAVDFDKNGYIEYSEFVTVAMDRKTLLS---RERLERAFRMFDSDNSGKISSTELATI 467
Query: 78 VQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCLKV 128
+ D+ E V ++D N+DG V +EF + LK+
Sbjct: 468 FGV--------SDVDS-----ETWKSVLSEVDKNNDGEVDFDEFQQMLLKL 505
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Query: 38 LLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDA---A 94
LL S L ++L F D NGDG + R+EL ++ ELM K Q + A
Sbjct: 321 LLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAEL---IEGYKELMRMKGQDASMLDA 377
Query: 95 RKAKEQIDFVFRKLDLNDDGVVTLEEFIESCLKVSTQLEK 134
+ ++D V +D + +G + EF+ + T L +
Sbjct: 378 SAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSR 417
Score = 33.1 bits (74), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 19/111 (17%)
Query: 21 VFKAFDVNCNGAISFRDLLVTL---STLLRGSIYEKLRWTFKLYDINGDGCISRSELTQI 77
V A D + NG I + + + TLL E+L F+++D + G IS +EL I
Sbjct: 387 VLDAVDFDKNGYIEYSEFVTVAMDRKTLLS---RERLERAFRMFDSDNSGKISSTELATI 443
Query: 78 VQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCLKV 128
G + K+ V ++D N+DG V +EF + LK+
Sbjct: 444 -------FGVSDVDSETWKS------VLSEVDKNNDGEVDFDEFQQMLLKL 481
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGSIYEKLRW-TFKLYDINGDGCISRSELTQIVQAVHEL 84
D + +G I + + + + L R + +KL + F+++D++ DG I+ +EL I+ ++
Sbjct: 97 DSDGSGKIDYTEFIA--AALDRKQLSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNK- 153
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
G Q D R + + R +D N+DG + EF E
Sbjct: 154 KGNITQRDVNRVKR-----MIRDVDKNNDGKIDFHEFSE 187
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 13/88 (14%)
Query: 52 EKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLN 111
EKL+ TF + D +G G I++ +L +K K D + ++D +
Sbjct: 52 EKLKSTFLVLDEDGKGYITKEQL------------KKGLEKDGLKLPYNFDLLLDQIDSD 99
Query: 112 DDGVVTLEEFIESCLKVSTQLEKSIESC 139
G + EFI + L QL K + C
Sbjct: 100 GSGKIDYTEFIAAALD-RKQLSKKLIYC 126
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 52 EKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDA---ARKAKEQIDFVFRKL 108
++L F+ D NGDG + R EL ++ +LM K T + + + + ++D + + +
Sbjct: 314 KELTQIFRQLDNNGDGQLDRKEL---IEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSV 370
Query: 109 DLNDDGVVTLEEFIESCL 126
D + +G + EF+ C+
Sbjct: 371 DFDRNGYIEYSEFVTVCM 388
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 15/110 (13%)
Query: 20 YVFKAFDVNCNGAISFRDLL-VTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIV 78
++ ++ D + NG I + + + V + L S E+L F+ +D +G G I+ EL +
Sbjct: 365 HILQSVDFDRNGYIEYSEFVTVCMDKQLLLS-RERLLAAFQQFDSDGSGKITNEELGR-- 421
Query: 79 QAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCLKV 128
L G D E V ++ D N+DG V EEF+E K+
Sbjct: 422 -----LFGVTEVDD------ETWHQVLQECDKNNDGEVDFEEFVEMMQKI 460
Score = 26.9 bits (58), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 15/78 (19%)
Query: 76 QIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCLKV------- 128
++ QA MG K T K QI FR+LD N DG + +E IE K+
Sbjct: 294 KLAQAAMLFMGSKLTTLEETKELTQI---FRQLDNNGDGQLDRKELIEGYRKLMQWKGDT 350
Query: 129 -----STQLEKSIESCLK 141
S+Q+E ++ L+
Sbjct: 351 VSDLDSSQIEAEVDHILQ 368
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 11/76 (14%)
Query: 47 RGSIYEKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFR 106
+G E+L F+++D N DG I EL +I++A E + +E I+ + +
Sbjct: 5 KGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHV-----------IEEDIEDLMK 53
Query: 107 KLDLNDDGVVTLEEFI 122
D N+DG + +EF+
Sbjct: 54 DSDKNNDGRIDFDEFL 69
Score = 30.4 bits (67), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 92 DAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCLKVSTQ--LEKSIESCLKVSTQN 146
DA K++E++ FR D N DG + +EE E L+ + + +E+ IE +K S +N
Sbjct: 3 DAKGKSEEELANCFRIFDKNADGFIDIEELGE-ILRATGEHVIEEDIEDLMKDSDKN 58
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain
(T94-Y172) Of The Human Centrin 2 In Complex With A
Repeat Sequence Of Human Sfi1 (R641-T660)
Length = 79
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Query: 1 MSNVTSKEGVIRDSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKL 60
MS +KE +++ FK FD + G ISF++L L E+L+
Sbjct: 4 MSEKDTKEEILK--------AFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDE 55
Query: 61 YDINGDGCISRSELTQIVQ 79
D +GDG +S E +I++
Sbjct: 56 ADRDGDGEVSEQEFLRIMK 74
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 34.7 bits (78), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 50 IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLD 109
+ ++LR F+LYD G+G IS + +I+ + E + + E +D + ++D
Sbjct: 1 MQQELREAFRLYDKEGNGYISTDVMREILAELDETL-----------SSEDLDAMIDEID 49
Query: 110 LNDDGVVTLEEFI 122
+ G V EEF+
Sbjct: 50 ADGSGTVDFEEFM 62
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDA---ARKAKEQIDFVFRKLD 109
+L F+ D NGDG + R EL ++ +LM K T + + + + ++D + + +D
Sbjct: 41 ELTQIFRQLDNNGDGQLDRKEL---IEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVD 97
Query: 110 LNDDGVVTLEEFIESCL 126
+ +G + EF+ C+
Sbjct: 98 FDRNGYIEYSEFVTVCM 114
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 15/110 (13%)
Query: 20 YVFKAFDVNCNGAISFRDLL-VTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIV 78
++ ++ D + NG I + + + V + L S E+L F+ +D +G G I+ EL ++
Sbjct: 91 HILQSVDFDRNGYIEYSEFVTVCMDKQLLLS-RERLLAAFQQFDSDGSGKITNEELGRLF 149
Query: 79 QAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCLKV 128
V E+ E V ++ D N+DG V EEF+E K+
Sbjct: 150 -GVTEV------------DDETWHQVLQECDKNNDGEVDFEEFVEMMQKI 186
Score = 26.6 bits (57), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 15/78 (19%)
Query: 76 QIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCLKV------- 128
++ QA MG K T K QI FR+LD N DG + +E IE K+
Sbjct: 20 KLAQAAMLFMGSKLTTLEETKELTQI---FRQLDNNGDGQLDRKELIEGYRKLMQWKGDT 76
Query: 129 -----STQLEKSIESCLK 141
S+Q+E ++ L+
Sbjct: 77 VSDLDSSQIEAEVDHILQ 94
>pdb|1CB1|A Chain A, Three-Dimensional Solution Structure Of Ca2+-Loaded
Porcine Calbindin D9k Determined By Nuclear Magnetic
Resonance Spectroscopy
Length = 78
Score = 34.3 bits (77), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 14/73 (19%)
Query: 49 SIYEKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKL 108
SI+EK + K D N +S+ EL Q++QA + + +T +D +F++L
Sbjct: 11 SIFEK--YAAKEGDPN---QLSKEELKQLIQAEFPSLLKGPRT---------LDDLFQEL 56
Query: 109 DLNDDGVVTLEEF 121
D N DG V+ EEF
Sbjct: 57 DKNGDGEVSFEEF 69
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 34.3 bits (77), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Query: 1 MSNVTSKEGVIRDSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKL 60
MS +KE +++ FK FD + G ISF++L L E+L+
Sbjct: 72 MSEKDTKEEILK--------AFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDE 123
Query: 61 YDINGDGCISRSELTQIVQ 79
D +GDG +S E +I++
Sbjct: 124 ADRDGDGEVSEQEFLRIMK 142
Score = 29.3 bits (64), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 12/98 (12%)
Query: 26 DVNCNGAISFRDLLVTLSTLL-RGSIYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D G ++F D L ++ + E++ FKL+D + G IS L ++ + + E
Sbjct: 52 DKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGE- 110
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFI 122
N TD E++ + + D + DG V+ +EF+
Sbjct: 111 ----NLTD------EELQEMIDEADRDGDGEVSEQEFL 138
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 11/76 (14%)
Query: 48 GSIYEKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRK 107
G E+L F+++D N DG I EL ++QA E + ++ I+ + +
Sbjct: 2 GKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETI-----------TEDDIEELMKD 50
Query: 108 LDLNDDGVVTLEEFIE 123
D N+DG + +EF+E
Sbjct: 51 GDKNNDGRIDYDEFLE 66
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 34.3 bits (77), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 4 VTSKEGVIRDSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDI 63
+T+K G RDS F+ FD + G ISF++L L E+L+ D
Sbjct: 70 MTAKMGE-RDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMIDEADR 128
Query: 64 NGDGCISRSELTQIVQ 79
+GDG ++ E +I++
Sbjct: 129 DGDGEVNEEEFFRIMK 144
Score = 29.3 bits (64), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 52 EKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLN 111
+++R F L+D +G G I EL ++A+ KE+I + +D +
Sbjct: 8 QEIREAFDLFDTDGSGTIDAKELKVAMRAL-----------GFEPKKEEIKKMIADIDKD 56
Query: 112 DDGVVTLEEFIE 123
G + EEF++
Sbjct: 57 GSGTIDFEEFLQ 68
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 33.9 bits (76), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 26 DVNCNGAISFRDLLVTLSTLLRGSIYEKLRW-TFKLYDINGDGCISRSELTQIVQAVHEL 84
D + +G I + + L + + R + +KL + F+++D++ DG I+ +EL H L
Sbjct: 100 DSDGSGNIDYTEFLA--AAIDRRQLSKKLIYCAFRVFDVDNDGEITTAELA------HVL 151
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIE 123
+ + + Q+ + R++D N DG + EF E
Sbjct: 152 FNGNKRGNITERDVNQVKKMIREVDKNGDGKIDFYEFSE 190
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 33.9 bits (76), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Query: 1 MSNVTSKEGVIRDSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKL 60
MS +KE +++ FK FD + G ISF++L L E+L+
Sbjct: 14 MSEKDTKEEILK--------AFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDE 65
Query: 61 YDINGDGCISRSELTQIVQ 79
D +GDG +S E +I++
Sbjct: 66 ADRDGDGEVSEQEFLRIMK 84
Score = 26.2 bits (56), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 12/98 (12%)
Query: 33 ISFRDLLVTLSTLL-RGSIYEKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQT 91
++F D L ++ + E++ FKL+D + G IS L ++ + + E N T
Sbjct: 1 MNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGE-----NLT 55
Query: 92 DAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCLKVS 129
D + +E ID + D + DG V+ +EF+ K S
Sbjct: 56 D--EELQEMID----EADRDGDGEVSEQEFLRIMKKTS 87
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 33.9 bits (76), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 38/69 (55%), Gaps = 11/69 (15%)
Query: 54 LRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDD 113
+ F L+D +GDGCI+ EL +++++ +N T +E++ + ++D + +
Sbjct: 12 FKEAFGLFDKDGDGCITVEELATVIRSLD-----QNPT------EEELQDMISEVDADGN 60
Query: 114 GVVTLEEFI 122
G + +EF+
Sbjct: 61 GTIEFDEFL 69
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 33.9 bits (76), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 34/65 (52%)
Query: 18 AHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQI 77
A +FK DVN +GA+S+ ++ +S + L+ FK D +G+G I ++E +
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 78 VQAVH 82
++
Sbjct: 62 YGSIQ 66
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 11/64 (17%)
Query: 58 FKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVT 117
FK D+NGDG +S E+ V A K ++ + +F+ +D + +G +
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSKKR-----------AIKNEQLLQLIFKSIDADGNGEID 54
Query: 118 LEEF 121
EF
Sbjct: 55 QNEF 58
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 33.9 bits (76), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 38/69 (55%), Gaps = 11/69 (15%)
Query: 54 LRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDD 113
+ F L+D +GDGCI+ EL +++++ +N T +E++ + ++D + +
Sbjct: 12 FKEAFGLFDKDGDGCITVEELATVIRSLD-----QNPT------EEELQDMISEVDADGN 60
Query: 114 GVVTLEEFI 122
G + +EF+
Sbjct: 61 GTIEFDEFL 69
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 33.9 bits (76), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 11/89 (12%)
Query: 34 SFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDA 93
S D L + + + F ++D +G G IS EL +++ ++G +N T
Sbjct: 2 SMTDQQAEARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMR----MLG-QNPT-- 54
Query: 94 ARKAKEQIDFVFRKLDLNDDGVVTLEEFI 122
KE++D + ++D + G + EEF+
Sbjct: 55 ----KEELDAIIEEVDEDGSGTIDFEEFL 79
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 33.5 bits (75), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 38/85 (44%)
Query: 38 LLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKA 97
LL S L ++L F D NGDG + R+EL + + + G+ A
Sbjct: 321 LLYXGSKLTSQDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAV 380
Query: 98 KEQIDFVFRKLDLNDDGVVTLEEFI 122
+ ++D V +D + +G + EF+
Sbjct: 381 EHEVDQVLDAVDFDKNGYIEYSEFV 405
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 19/111 (17%)
Query: 21 VFKAFDVNCNGAISFRDLLVTL---STLLRGSIYEKLRWTFKLYDINGDGCISRSELTQI 77
V A D + NG I + + + TLL E+L F+ +D + G IS +EL I
Sbjct: 387 VLDAVDFDKNGYIEYSEFVTVAXDRKTLLS---RERLERAFRXFDSDNSGKISSTELATI 443
Query: 78 VQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCLKV 128
G + K+ V ++D N+DG V +EF + LK+
Sbjct: 444 -------FGVSDVDSETWKS------VLSEVDKNNDGEVDFDEFQQXLLKL 481
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 33.5 bits (75), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 11/72 (15%)
Query: 52 EKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLN 111
E+L F+++D N DG I EL ++QA E + ++ I+ + + D N
Sbjct: 5 EELSDLFRMFDKNADGYIDLEELKIMLQATGETI-----------TEDDIEELMKDGDKN 53
Query: 112 DDGVVTLEEFIE 123
+DG + +EF+E
Sbjct: 54 NDGRIDYDEFLE 65
Score = 26.2 bits (56), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 96 KAKEQIDFVFRKLDLNDDGVVTLEEFIESCLKVS--TQLEKSIESCLKVSTQN 146
K++E++ +FR D N DG + LEE ++ L+ + T E IE +K +N
Sbjct: 2 KSEEELSDLFRMFDKNADGYIDLEE-LKIMLQATGETITEDDIEELMKDGDKN 53
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 33.1 bits (74), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 38/70 (54%), Gaps = 11/70 (15%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDGCI+ EL +++++ +N T+A ++ + ++D +
Sbjct: 11 EFKEAFSLFDKDGDGCITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 59
Query: 113 DGVVTLEEFI 122
+G + EF+
Sbjct: 60 NGTIDFPEFL 69
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 33.1 bits (74), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 11/70 (15%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F ++D +G G IS EL +++ + +N T KE++D + ++D +
Sbjct: 10 EFKAAFDMFDADGGGDISTKELGTVMRMLG-----QNPT------KEELDAIIEEVDEDG 58
Query: 113 DGVVTLEEFI 122
G + EEF+
Sbjct: 59 SGTIDFEEFL 68
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 32.7 bits (73), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 15/99 (15%)
Query: 32 AISFRDLLVTLSTLL--RGSIYEKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKN 89
++ F + L L+ Y FK +D G G IS +EL ++ + E
Sbjct: 62 SLPFEEFLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGE------ 115
Query: 90 QTDAARKAKEQIDFVFRKLDLNDD--GVVTLEEFIESCL 126
R + E++D + DL +D G V EEF++ +
Sbjct: 116 -----RLSDEEVDEIINLTDLQEDLEGNVKYEEFVKKVM 149
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 32.7 bits (73), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 15/99 (15%)
Query: 32 AISFRDLLVTLSTLL--RGSIYEKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKN 89
++ F + L L+ Y FK +D G G IS +EL ++ + E
Sbjct: 63 SLPFEEFLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGE------ 116
Query: 90 QTDAARKAKEQIDFVFRKLDLNDD--GVVTLEEFIESCL 126
R + E++D + DL +D G V EEF++ +
Sbjct: 117 -----RLSDEEVDEIINLTDLQEDLEGNVKYEEFVKKVM 150
>pdb|1SNL|A Chain A, Nmr Solution Structure Of The Calcium-Binding Domain Of
Nucleobindin (Calnuc)
Length = 103
Score = 32.7 bits (73), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 58 FKLYDINGDGCISRSELTQI-VQAVHELMGRKNQTDAARKAKEQI----DFVFRKLDLND 112
F L+DIN DG + EL + + + ++ KN+ D R+ +E+ + V + +D N
Sbjct: 26 FILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQ 85
Query: 113 DGVVTLEEFIESC 125
D +VTLEEF+ S
Sbjct: 86 DRLVTLEEFLAST 98
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 32.3 bits (72), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQ 79
FK FD + G ISF++L L E+L+ D +GDG +S E +I +
Sbjct: 109 AFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEXIDEADRDGDGEVSEQEFLRIXK 167
Score = 26.9 bits (58), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 12/105 (11%)
Query: 26 DVNCNGAISFRDLL-VTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQAVHEL 84
D G +F D L V E++ FKL+D + G IS L ++ + + E
Sbjct: 77 DKEGTGKXNFGDFLTVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGE- 135
Query: 85 MGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCLKVS 129
N TD + +E ID + D + DG V+ +EF+ K S
Sbjct: 136 ----NLTD--EELQEXID----EADRDGDGEVSEQEFLRIXKKTS 170
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 32.3 bits (72), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQI 77
F+ FD + G IS ++L L E+LR + +D++GDG I+ +E I
Sbjct: 101 AFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAXIEEFDLDGDGEINENEFIAI 157
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 11/87 (12%)
Query: 39 LVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAK 98
+V +L+ ++++ F+L+D + G IS L ++ + + E + TD +A
Sbjct: 83 IVXGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETL-----TDEELRA- 136
Query: 99 EQIDFVFRKLDLNDDGVVTLEEFIESC 125
+ DL+ DG + EFI C
Sbjct: 137 -----XIEEFDLDGDGEINENEFIAIC 158
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 32.3 bits (72), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQI 77
F+ FD + G IS ++L L E+LR + +D++GDG I+ +E I
Sbjct: 101 AFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEFIAI 157
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/102 (21%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 25 FDVNCNGAISFRDLLVTLST-LLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQAVHE 83
+D + + D + + +L+ ++++ F+L+D + G IS L ++ + + E
Sbjct: 68 YDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGE 127
Query: 84 LMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESC 125
+ TD +A + + DL+ DG + EFI C
Sbjct: 128 TL-----TDEELRA------MIEEFDLDGDGEINENEFIAIC 158
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 32.3 bits (72), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 11/89 (12%)
Query: 34 SFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDA 93
S D L + + + F ++D +G G IS T+ + V ++G +N T
Sbjct: 2 SMTDQQAEARAFLSEEMIAEFKAAFDMFDADGGGDIS----TKALGTVMRMLG-QNPT-- 54
Query: 94 ARKAKEQIDFVFRKLDLNDDGVVTLEEFI 122
KE++D + ++D + G + EEF+
Sbjct: 55 ----KEELDAIIEEVDEDGSGTIDFEEFL 79
>pdb|3LCP|C Chain C, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
pdb|3LCP|D Chain D, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
Length = 93
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Query: 58 FKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQ----IDFVFRKLDLNDD 113
FK++D +G+ + EL+ + VH+ G + A ++++ ID V R D N+D
Sbjct: 24 FKMHDYDGNNLLDGLELSTAITHVHKEEGSEQ---APLMSEDELINIIDGVLRDDDKNND 80
Query: 114 GVVTLEEFIESC 125
G + EF +S
Sbjct: 81 GYIDYAEFAKSL 92
>pdb|2VRG|A Chain A, Structure Of Human Mcfd2
Length = 124
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 58 FKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQ----IDFVFRKLDLNDD 113
FK++D +G+ + EL+ + VH+ G + A ++++ ID V R D N+D
Sbjct: 55 FKMHDYDGNNLLDGLELSTAITHVHKEEGSEQ---APLMSEDELINIIDGVLRDDDKNND 111
Query: 114 GVVTLEEFIES 124
G + EF +S
Sbjct: 112 GYIDYAEFAKS 122
>pdb|3A4U|B Chain B, Crystal Structure Of Mcfd2 In Complex With Carbohydrate
Recognition Domain Of Ergic-53
Length = 143
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Query: 58 FKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQ----IDFVFRKLDLNDD 113
FK++D +G+ + EL+ + VH+ G + A ++++ ID V R D N+D
Sbjct: 74 FKMHDYDGNNLLDGLELSTAITHVHKEEGSEQ---APLMSEDELINIIDGVLRDDDKNND 130
Query: 114 GVVTLEEFIESC 125
G + EF +S
Sbjct: 131 GYIDYAEFAKSL 142
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 17/100 (17%)
Query: 32 AISFRDLLVTLSTLL---RGSIYEKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRK 88
++ F + L L+ +G+ + + FK +D G G IS +EL ++ + E
Sbjct: 62 SLPFEEFLPAYEGLMDCEQGTFADYME-AFKTFDREGQGFISGAELRHVLSGLGE----- 115
Query: 89 NQTDAARKAKEQIDFVFRKLDLNDD--GVVTLEEFIESCL 126
R + E++D + DL +D G V EEF++ +
Sbjct: 116 ------RLSDEEVDEIINLTDLQEDLEGNVKYEEFVKKVM 149
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 17/100 (17%)
Query: 32 AISFRDLLVTLSTLL---RGSIYEKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRK 88
++ F + L L+ +G+ + + FK +D G G IS +EL ++ A+ E
Sbjct: 62 SLPFEEFLPAYEGLMDCEQGTFADYME-AFKTFDREGQGFISGAELRHVLTALGE----- 115
Query: 89 NQTDAARKAKEQIDFVFRKLDLNDD--GVVTLEEFIESCL 126
R + E +D + + DL +D G V E+F++ +
Sbjct: 116 ------RLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVM 149
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 17/100 (17%)
Query: 32 AISFRDLLVTLSTLL---RGSIYEKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRK 88
++ F + L L+ +G+ + + FK +D G G IS +EL ++ A+ E
Sbjct: 62 SLPFEEFLPAYEGLMDCEQGTFADYME-AFKTFDREGQGFISGAELRHVLTALGE----- 115
Query: 89 NQTDAARKAKEQIDFVFRKLDLNDD--GVVTLEEFIESCL 126
R + E +D + + DL +D G V E+F++ +
Sbjct: 116 ------RLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVM 149
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 17/100 (17%)
Query: 32 AISFRDLLVTLSTLL---RGSIYEKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRK 88
++ F + L L+ +G+ + + FK +D G G IS +EL ++ A+ E
Sbjct: 59 SLPFEEFLPAYEGLMDCEQGTFADYME-AFKTFDREGQGFISGAELRHVLTALGE----- 112
Query: 89 NQTDAARKAKEQIDFVFRKLDLNDD--GVVTLEEFIESCL 126
R + E +D + + DL +D G V E+F++ +
Sbjct: 113 ------RLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVM 146
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 17/100 (17%)
Query: 32 AISFRDLLVTLSTLL---RGSIYEKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRK 88
++ F + L L+ +G+ + + FK +D G G IS +EL ++ A+ E
Sbjct: 62 SLPFEEFLPAYEGLMDCEQGTFADYME-AFKTFDREGQGFISGAELRHVLTALGE----- 115
Query: 89 NQTDAARKAKEQIDFVFRKLDLNDD--GVVTLEEFIESCL 126
R + E +D + + DL +D G V E+F++ +
Sbjct: 116 ------RLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVM 149
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 17/100 (17%)
Query: 32 AISFRDLLVTLSTLL---RGSIYEKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRK 88
++ F + L L+ +G+ + + FK +D G G IS +EL ++ A+ E
Sbjct: 60 SLPFEEFLPAYEGLMDCEQGTFADYME-AFKTFDREGQGFISGAELRHVLTALGE----- 113
Query: 89 NQTDAARKAKEQIDFVFRKLDLNDD--GVVTLEEFIESCL 126
R + E +D + + DL +D G V E+F++ +
Sbjct: 114 ------RLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVM 147
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 59
Query: 113 DGVVTLEEFI 122
DG + EF+
Sbjct: 60 DGTIDFPEFL 69
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 17/100 (17%)
Query: 32 AISFRDLLVTLSTLL---RGSIYEKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRK 88
++ F + L L+ +G+ + + FK +D G G IS +EL ++ A+ E
Sbjct: 59 SLPFEEFLPAYEGLMDCEQGTFADYME-AFKTFDREGQGFISGAELRHVLTALGE----- 112
Query: 89 NQTDAARKAKEQIDFVFRKLDLNDD--GVVTLEEFIESCL 126
R + E +D + + DL +D G V E+F++ +
Sbjct: 113 ------RLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVM 146
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 14/106 (13%)
Query: 26 DVNCNGAISFRDLLVTLSTLL--RGSIYEKLRWTFKLYDINGDGCISRSELTQIVQAVHE 83
D + +G I F + L ++ + R S E L+ F+L+D + G I+ +L ++ + + E
Sbjct: 74 DKDGSGTIDFEEFLTMMTAKMGERDSREEILK-AFRLFDDDNSGTITIKDLRRVAKELGE 132
Query: 84 LMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCLKVS 129
+ +E++ + + D NDD + +EFI K S
Sbjct: 133 NL-----------TEEELQEMIAEADRNDDNEIDEDEFIRIMKKTS 167
Score = 30.4 bits (67), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 11/71 (15%)
Query: 52 EKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLN 111
+++R F L+D +G G I EL ++A+ KE+I + ++D +
Sbjct: 28 QEIREAFDLFDTDGSGTIDAKELKVAMRAL-----------GFEPKKEEIKKMISEIDKD 76
Query: 112 DDGVVTLEEFI 122
G + EEF+
Sbjct: 77 GSGTIDFEEFL 87
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Query: 1 MSNVTSKEGVIRDSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKL 60
++ +T+K G RDS F+ FD + +G I+ +DL L E+L+
Sbjct: 87 LTMMTAKMGE-RDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAE 145
Query: 61 YDINGDGCISRSELTQIVQ 79
D N D I E +I++
Sbjct: 146 ADRNDDNEIDEDEFIRIMK 164
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 17/118 (14%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLRGSIY--EKLRWTFKLYDINGDGCISRSELTQIV 78
+ A D + NG I + + + + R S+ +KL F+ +D +G+G IS EL +
Sbjct: 112 ILGAADFDRNGYIDYSEFVTV--AMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVF 169
Query: 79 QAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCLKVSTQLEKSI 136
H ++ KE I +D N+DG V EEF + K+ + E +
Sbjct: 170 GLDHL---------ESKTWKEMI----SGIDSNNDGDVDFEEFCKMIQKLCSNNEPQL 214
Score = 29.3 bits (64), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 4/110 (3%)
Query: 38 LLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKA 97
LL S L ++L F+ D NGDG + R EL + +L G + +
Sbjct: 49 LLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQEL---IDGYSKLSGEEVAVFDLPQI 105
Query: 98 KEQIDFVFRKLDLNDDGVVTLEEFIESCLKVSTQLEKS-IESCLKVSTQN 146
+ ++D + D + +G + EF+ + + L K +ES + Q+
Sbjct: 106 ESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQD 155
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 19/83 (22%)
Query: 58 FKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVT 117
+KL D N +G +S E+ ++ +V G K K I+ + + LD+ND G +T
Sbjct: 46 YKL-DTNHNGSLSHREIYTVLASV----GIK---------KWDINRILQALDINDRGNIT 91
Query: 118 LEEFIESCLKVSTQLEKSIESCL 140
EF+ C + K+IES
Sbjct: 92 YTEFMAGCYRW-----KNIESTF 109
>pdb|1BOD|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 74
Score = 31.2 bits (69), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 52 EKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLN 111
E+L+ F+ YD GDG +S+ EL ++Q + + K +D +F +LD N
Sbjct: 5 EELKGIFEKYDKEGDGQLSKEELKLLLQT---------EFPSLLKGMSTLDELFEELDKN 55
Query: 112 DDGVVTLEEF 121
DG V+ EEF
Sbjct: 56 GDGEVSFEEF 65
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 13/70 (18%)
Query: 58 FKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQI-DFVFRKLDLNDDGVV 116
F+ YD + G I ++EL Q + A + +Q D + RK D G +
Sbjct: 80 FRTYDRDNSGMIDKNELKQALSG------------AGYRLSDQFHDILIRKFDRQGRGQI 127
Query: 117 TLEEFIESCL 126
++FI+ C+
Sbjct: 128 AFDDFIQGCI 137
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 31.2 bits (69), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 11/69 (15%)
Query: 58 FKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVT 117
F+ YD + G I ++EL Q + R + + D + RK D G +
Sbjct: 99 FRTYDRDNSGMIDKNELKQALSGF-----------GYRLSDQFHDILIRKFDRQGRGQIA 147
Query: 118 LEEFIESCL 126
++FI+ C+
Sbjct: 148 FDDFIQGCI 156
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 30.8 bits (68), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 11/69 (15%)
Query: 58 FKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVT 117
F+ YD + G I ++EL Q + R + + D + RK D G +
Sbjct: 98 FRTYDRDNSGMIDKNELKQALSGF-----------GYRLSDQFHDILIRKFDRQGRGQIA 146
Query: 118 LEEFIESCL 126
++FI+ C+
Sbjct: 147 FDDFIQGCI 155
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 30.8 bits (68), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 11/71 (15%)
Query: 52 EKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLN 111
+++R F L+D +G G I EL ++A+ KE+I + ++D +
Sbjct: 30 QEIREAFDLFDTDGSGTIDAKELKVAMRAL-----------GFEPKKEEIKKMISEIDKD 78
Query: 112 DDGVVTLEEFI 122
G + EEF+
Sbjct: 79 GSGTIDFEEFL 89
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 11/69 (15%)
Query: 58 FKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVT 117
F+ YD + G I ++EL Q + R + + D + RK D G +
Sbjct: 80 FRTYDRDNSGMIDKNELKQALSGF-----------GYRLSDQFHDILIRKFDRQGRGQIA 128
Query: 118 LEEFIESCL 126
++FI+ C+
Sbjct: 129 FDDFIQGCI 137
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 11/69 (15%)
Query: 58 FKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVT 117
F+ YD + G I ++EL Q + R + + D + RK D G +
Sbjct: 76 FRTYDRDNSGMIDKNELKQALSGF-----------GYRLSDQFHDILIRKFDRQGRGQIA 124
Query: 118 LEEFIESCL 126
++FI+ C+
Sbjct: 125 FDDFIQGCI 133
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 30.8 bits (68), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 11/69 (15%)
Query: 58 FKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVT 117
F+ YD + G I ++EL Q + R + + D + RK D G +
Sbjct: 77 FRTYDRDNSGMIDKNELKQALSGF-----------GYRLSDQFHDILIRKFDRQGRGQIA 125
Query: 118 LEEFIESCL 126
++FI+ C+
Sbjct: 126 FDDFIQGCI 134
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 30.8 bits (68), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 17/103 (16%)
Query: 21 VFKAFDVNCNGAISFRDLLVTLSTLLRGSIY--EKLRWTFKLYDINGDGCISRSELTQIV 78
+ A D + NG I + + + + R S+ +KL F+ +D +G+G IS EL +
Sbjct: 395 ILGAADFDRNGYIDYSEFVTV--AMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVF 452
Query: 79 QAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEF 121
H ++ KE I + D N+DG V EEF
Sbjct: 453 GLDHL---------ESKTWKEMISGI----DSNNDGDVDFEEF 482
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 4/110 (3%)
Query: 38 LLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKA 97
LL S L ++L F+ D NGDG + R EL + +L G + +
Sbjct: 332 LLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQEL---IDGYSKLSGEEVAVFDLPQI 388
Query: 98 KEQIDFVFRKLDLNDDGVVTLEEFIESCLKVSTQLEK-SIESCLKVSTQN 146
+ ++D + D + +G + EF+ + + L K +ES + Q+
Sbjct: 389 ESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQD 438
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 13/79 (16%)
Query: 48 GSIYEKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRK 107
G +LR F D N G + R E + EL R +A VF++
Sbjct: 23 GEELARLRSVFAACDANRSGRLEREEFRALCT---ELRVRPADAEA----------VFQR 69
Query: 108 LDLNDDGVVTLEEFIESCL 126
LD + DG +T +EF L
Sbjct: 70 LDADRDGAITFQEFARGFL 88
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 52 EKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLN 111
E+ T++ YD + G I EL ++ +L+ + N+T K E D + + D N
Sbjct: 103 EEFMKTWRKYDTDHSGFIETEELKNFLK---DLLEKANKTVDDTKLAEYTDLMLKLFDSN 159
Query: 112 DDGVVTLEE 120
+DG + L E
Sbjct: 160 NDGKLELTE 168
Score = 27.7 bits (60), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 14/78 (17%)
Query: 17 YAHYVFKAFDVNCNGAISF----RDLLVTLSTLLR-------GSIYEKLRWTFKLYDING 65
Y + K FD N +G + R L V + LL+ G + K F+LYD +G
Sbjct: 148 YTDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNK---AFELYDQDG 204
Query: 66 DGCISRSELTQIVQAVHE 83
+G I +EL +++ + E
Sbjct: 205 NGYIDENELDALLKDLCE 222
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 30.0 bits (66), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 48/109 (44%), Gaps = 17/109 (15%)
Query: 23 KAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQ--A 80
+A DV+ +G I +++ + L + + L F +D +G G I+ EL Q +
Sbjct: 70 QAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFG 129
Query: 81 VHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFIESCLKVS 129
V ++ +I+ + R +D ++DG + EF+ K S
Sbjct: 130 VEDV---------------RIEELXRDVDQDNDGRIDYNEFVAXXQKGS 163
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 30.0 bits (66), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 58 FKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVT 117
F+ YD + G I ++EL Q + R + + D + RK D G +
Sbjct: 77 FRTYDRDNSGMIDKNELKQALSGY-------------RLSDQFHDILIRKFDRQGRGQIA 123
Query: 118 LEEFIESCL 126
++FI+ C+
Sbjct: 124 FDDFIQGCI 132
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 29.6 bits (65), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 59
Query: 113 DGVVTLEEFI 122
+G + EF+
Sbjct: 60 NGTIDFPEFL 69
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 29.6 bits (65), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 38/76 (50%), Gaps = 11/76 (14%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F LYD +GDG I+ EL +++++ N T+A ++ + ++D +
Sbjct: 11 EFKEAFSLYDKDGDGTITTKELGTVMRSLG-----LNPTEA------ELQDMINEVDADG 59
Query: 113 DGVVTLEEFIESCLKV 128
+G + EF+ ++
Sbjct: 60 NGTIDFPEFLTMMARI 75
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 29.6 bits (65), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 59
Query: 113 DGVVTLEEFI 122
+G + EF+
Sbjct: 60 NGTIDFPEFL 69
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 29.6 bits (65), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 50 IYEKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLD 109
+ +L FK D NGDG ++ EL + + K KE + + D
Sbjct: 5 VKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKD-----KVKEASAKLIKMAD 59
Query: 110 LNDDGVVTLEEFIESCLKVSTQLE 133
N DG ++ EEF+ + ++ QL+
Sbjct: 60 KNSDGKISKEEFLNANAELLCQLK 83
Score = 26.9 bits (58), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 94 ARKAKEQIDFVFRKLDLNDDGVVTLEEF 121
A K K +++ F+KLD N DG VT E
Sbjct: 2 ACKVKAELEAAFKKLDANGDGYVTALEL 29
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 29.6 bits (65), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 59
Query: 113 DGVVTLEEFI 122
+G + EF+
Sbjct: 60 NGTIDFPEFL 69
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 29.6 bits (65), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 59
Query: 113 DGVVTLEEFI 122
+G + EF+
Sbjct: 60 NGTIDFPEFL 69
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 29.6 bits (65), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 60
Query: 113 DGVVTLEEFI 122
+G + EF+
Sbjct: 61 NGTIDFPEFL 70
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 29.6 bits (65), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 59
Query: 113 DGVVTLEEFI 122
+G + EF+
Sbjct: 60 NGTIDFPEFL 69
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 29.6 bits (65), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 59
Query: 113 DGVVTLEEFI 122
+G + EF+
Sbjct: 60 NGTIDFPEFL 69
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 29.6 bits (65), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 53 KLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLND 112
+ + F L+D +GDG I+ EL +++++ +N T+A ++ + ++D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEA------ELQDMINEVDADG 59
Query: 113 DGVVTLEEFI 122
+G + EF+
Sbjct: 60 NGTIDFPEFL 69
>pdb|2Y3N|B Chain B, Type Ii Cohesin-Dockerin Domain From Bacteroides
Cellolosolvens
pdb|2Y3N|D Chain D, Type Ii Cohesin-Dockerin Domain From Bacteroides
Cellolosolvens
Length = 71
Score = 29.6 bits (65), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 14/61 (22%)
Query: 62 DINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEF 121
D+NGDG I+ +++ + Q+ + +G V K DLN+DGV+ ++
Sbjct: 8 DLNGDGVINMADVMILAQSFGKAIGNPG--------------VNEKADLNNDGVINSDDA 53
Query: 122 I 122
I
Sbjct: 54 I 54
>pdb|1XK4|A Chain A, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|B Chain B, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|E Chain E, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|F Chain F, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|I Chain I, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|J Chain J, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|4GGF|A Chain A, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|K Chain K, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|S Chain S, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|U Chain U, Crystal Structure Of Mn2+ Bound Calprotectin
Length = 93
Score = 29.3 bits (64), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 98 KEQIDFVFRKLDLNDDGVVTLEEFIESCLKVSTQLEK 134
K+ D F++LD+N DG V +EF+ +K+ K
Sbjct: 48 KKGADVWFKELDINTDGAVNFQEFLILVIKMGVAAHK 84
Score = 26.9 bits (58), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 8/19 (42%), Positives = 15/19 (78%)
Query: 22 FKAFDVNCNGAISFRDLLV 40
FK D+N +GA++F++ L+
Sbjct: 55 FKELDINTDGAVNFQEFLI 73
>pdb|1MR8|A Chain A, Migration Inhibitory Factor-Related Protein 8 From Human
pdb|1MR8|B Chain B, Migration Inhibitory Factor-Related Protein 8 From Human
Length = 93
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 98 KEQIDFVFRKLDLNDDGVVTLEEFIESCLKVSTQLEK 134
K+ D F++LD+N DG V +EF+ +K+ K
Sbjct: 48 KKGADVWFKELDINTDGAVNFQEFLILVIKMGVAAHK 84
Score = 26.6 bits (57), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 8/19 (42%), Positives = 15/19 (78%)
Query: 22 FKAFDVNCNGAISFRDLLV 40
FK D+N +GA++F++ L+
Sbjct: 55 FKELDINTDGAVNFQEFLI 73
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 50/107 (46%), Gaps = 16/107 (14%)
Query: 51 YEKLRWT------FKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDA-ARKAKEQIDF 103
+E +W F DING+G I+ E+ + +A ++ + T A ++ +E ++
Sbjct: 16 FEDPKWVNRHKFMFNFLDINGNGKITLDEI--VSKASDDICAKLGATPAQTQRHQEAVEA 73
Query: 104 VFRKLDLNDDGVVTLEEFIESCLKVSTQLEKSIESCLKVSTQNLRNL 150
F+K+ L+ V F+ +++ LK+ +QN ++L
Sbjct: 74 FFKKIGLDYGKEVEFPAFVNGWKELAKH-------DLKLWSQNKKSL 113
>pdb|2LVV|A Chain A, Nmr Structure Of Tb24
Length = 226
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Query: 104 VFRKLDLNDDGVVTLEEFIESCLKVSTQLE 133
VF ++D N GVVT +EF SC V+ +L+
Sbjct: 175 VFNEIDTNGSGVVTFDEF--SCWAVTKKLQ 202
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 29/68 (42%)
Query: 12 RDSNLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISR 71
RDS F+ FD + +G I+ +DL L E+L+ D N D I
Sbjct: 5 RDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDE 64
Query: 72 SELTQIVQ 79
E +I++
Sbjct: 65 DEFIRIMK 72
>pdb|2LLU|A Chain A, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
pdb|2LLU|B Chain B, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
pdb|2LP2|A Chain A, Solution Structure And Dynamics Of Human S100a1 Protein
Modified At Cysteine 85 With Homocysteine Disulfide Bond
Formation In Calcium Saturated Form
pdb|2LP2|B Chain B, Solution Structure And Dynamics Of Human S100a1 Protein
Modified At Cysteine 85 With Homocysteine Disulfide Bond
Formation In Calcium Saturated Form
pdb|2LP3|A Chain A, Solution Structure Of S100a1 Ca2+
pdb|2LP3|B Chain B, Solution Structure Of S100a1 Ca2+
Length = 93
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Query: 69 ISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFI 122
+S+ EL +++Q EL G + A+K + +D V ++LD N DG V +E++
Sbjct: 28 LSKKELKELLQT--ELSGFLD----AQKDVDAVDKVMKELDENGDGEVDFQEYV 75
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 11/89 (12%)
Query: 34 SFRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDA 93
S D L + + + F ++D +G G IS EL +++ ++G +N T
Sbjct: 2 SMTDQQAEARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMR----MLG-QNPT-- 54
Query: 94 ARKAKEQIDFVFRKLDLNDDGVVTLEEFI 122
K ++D + ++D + G + EEF+
Sbjct: 55 ----KCELDAIICEVDEDGSGTIDFEEFL 79
>pdb|2L0P|A Chain A, Solution Structure Of Human Apo-S100a1 Protein By Nmr
Spectroscopy
pdb|2L0P|B Chain B, Solution Structure Of Human Apo-S100a1 Protein By Nmr
Spectroscopy
Length = 94
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Query: 69 ISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFI 122
+S+ EL +++Q EL G + A+K + +D V ++LD N DG V +E++
Sbjct: 29 LSKKELKELLQT--ELSGFLD----AQKDVDAVDKVMKELDENGDGEVDFQEYV 76
>pdb|2LLS|A Chain A, Solution Structure Of Human Apo-S100a1 C85m
pdb|2LLS|B Chain B, Solution Structure Of Human Apo-S100a1 C85m
Length = 93
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Query: 69 ISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFI 122
+S+ EL +++Q EL G + A+K + +D V ++LD N DG V +E++
Sbjct: 28 LSKKELKELLQT--ELSGFLD----AQKDVDAVDKVMKELDENGDGEVDFQEYV 75
>pdb|2LLT|A Chain A, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
pdb|2LLT|B Chain B, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
Length = 93
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Query: 69 ISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFI 122
+S+ EL +++Q EL G + A+K + +D V ++LD N DG V +E++
Sbjct: 28 LSKKELKELLQT--ELSGFLD----AQKDVDAVDKVMKELDENGDGEVDFQEYV 75
>pdb|1HKQ|A Chain A, Pps10 Plasmid Dna Replication Initiator Protein Repa.
Replication Inactive, Dimeric N-Terminal Domain.
pdb|1HKQ|B Chain B, Pps10 Plasmid Dna Replication Initiator Protein Repa.
Replication Inactive, Dimeric N-Terminal Domain
Length = 132
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 46 LRGSIYEKLRWTFKLYDINGDGCI 69
++G + E++RW F + G GC+
Sbjct: 84 VKGKVVERMRWVFHVKYREGQGCV 107
>pdb|3AKB|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 27.7 bits (60), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 51 YEK-LRWTFKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKL- 108
YE+ + F +D +G+G I RS+ + +A+ G ++D + + +++ L
Sbjct: 2 YERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLA 61
Query: 109 ---DLNDDGVVTLEEFIESCLK 127
D + D +T EEF+ +K
Sbjct: 62 GIADRDGDQRITREEFVTGAVK 83
>pdb|1NSH|A Chain A, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
pdb|1NSH|B Chain B, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
Length = 101
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
Query: 88 KNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFI 122
KNQ D +D + +KLDLN DG + +EF+
Sbjct: 48 KNQKDPGV-----LDRMMKKLDLNSDGQLDFQEFL 77
>pdb|3AKA|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 58 FKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKL----DLNDD 113
F +D +G+G I RS+ + +A+ G ++D + + +++ L D + D
Sbjct: 10 FTTFDQDGNGHIDRSDFSGAAKALLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGD 69
Query: 114 GVVTLEEFIESCLK 127
+T EEF+ +K
Sbjct: 70 QRITREEFVTGAVK 83
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Query: 21 VFKAFDVNCNGAIS---FRDLLVTLSTLLRGSIYEKLRWTFKLYDINGDGCIS 70
F+A D NG I R LL+ L L S E+L K ++GDG I+
Sbjct: 81 AFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEEL---MKEVSVSGDGAIN 130
>pdb|2JPT|A Chain A, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
pdb|2JPT|B Chain B, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
Length = 93
Score = 27.3 bits (59), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Query: 69 ISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFI 122
+S+ EL +++Q EL G + A+K + +D V ++LD + DG V +E++
Sbjct: 28 LSKKELKELLQT--ELSGFLD----AQKDADAVDKVMKELDEDGDGEVDFQEYV 75
>pdb|4ICB|A Chain A, Proline Cis-Trans Isomers In Calbindin D9k Observed By X-
Ray Crystallography
Length = 76
Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 96 KAKEQIDFVFRKLDLNDDGVVTLEEF 121
K +D +F +LD N DG V+ EEF
Sbjct: 42 KGPSTLDELFEELDKNGDGEVSFEEF 67
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 11/61 (18%)
Query: 61 YDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEE 120
+D NG G + +L + ++A+ M + AR+A I F KLD + DGVVT+++
Sbjct: 82 WDRNGSGTL---DLEEFLRALRPPMSQ------AREAV--IAAAFAKLDRSGDGVVTVDD 130
Query: 121 F 121
Sbjct: 131 L 131
>pdb|1IG5|A Chain A, Bovine Calbindin D9k Binding Mg2+
pdb|1IGV|A Chain A, Bovine Calbindin D9k Binding Mn2+
pdb|3ICB|A Chain A, The Refined Structure Of Vitamin D-Dependent Calcium-
Binding Protein From Bovine Intestine. Molecular
Details, Ion Binding, And Implications For The Structure
Of Other Calcium-Binding Proteins
Length = 75
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 96 KAKEQIDFVFRKLDLNDDGVVTLEEF 121
K +D +F +LD N DG V+ EEF
Sbjct: 41 KGPSTLDELFEELDKNGDGEVSFEEF 66
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 26.9 bits (58), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 104 VFRKLDLNDDGVVTLEEFIESCLKVST 130
VF K D N DG ++L+EF E L S
Sbjct: 6 VFEKFDKNKDGKLSLDEFREVALAFSP 32
>pdb|2CCM|A Chain A, X-Ray Structure Of Calexcitin From Loligo Pealeii At 1.8a
pdb|2CCM|B Chain B, X-Ray Structure Of Calexcitin From Loligo Pealeii At 1.8a
Length = 191
Score = 26.9 bits (58), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 8/82 (9%)
Query: 60 LYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKL----DLNDDGV 115
YD N DG I + ++ + L +A+ + ++ L D N+D
Sbjct: 21 FYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQ 80
Query: 116 VTLEEFIESCLKVSTQLEKSIE 137
VT EE+ LK+ + KS+E
Sbjct: 81 VTKEEW----LKMWAECVKSVE 98
>pdb|2LHL|A Chain A, Chemical Shift Assignments And Solution Structure Of Human
Apo-S100a1 E32q Mutant
pdb|2LHL|B Chain B, Chemical Shift Assignments And Solution Structure Of Human
Apo-S100a1 E32q Mutant
Length = 93
Score = 26.9 bits (58), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Query: 69 ISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVTLEEFI 122
+S+ +L +++Q EL G + A+K + +D V ++LD N DG V +E++
Sbjct: 28 LSKKQLKELLQT--ELSGFLD----AQKDVDAVDKVMKELDENGDGEVDFQEYV 75
>pdb|3FSL|A Chain A, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|B Chain B, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|C Chain C, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|D Chain D, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|E Chain E, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|F Chain F, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
Length = 397
Score = 26.9 bits (58), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Query: 22 FKAFDVNCNGAISFRDLLVTLSTLLRGSI 50
+ +D NG + F DLL TL TL GSI
Sbjct: 148 YPWYDEATNG-VRFNDLLATLKTLQAGSI 175
>pdb|1KCY|A Chain A, Nmr Solution Structure Of Apo Calbindin D9k (F36g + P43m
Mutant)
Length = 75
Score = 26.9 bits (58), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 101 IDFVFRKLDLNDDGVVTLEEF 121
+D +F +LD N DG V+ EEF
Sbjct: 46 LDELFEELDKNGDGEVSFEEF 66
>pdb|1KSM|A Chain A, Average Nmr Solution Structure Of Ca Ln Calbindin D9k
pdb|1KQV|A Chain A, Family Of Nmr Solution Structures Of Ca Ln Calbindin D9k
Length = 79
Score = 26.9 bits (58), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 101 IDFVFRKLDLNDDGVVTLEEF 121
+D +F +LD N DG V+ EEF
Sbjct: 50 LDELFEELDKNGDGEVSFEEF 70
>pdb|1CDN|A Chain A, Solution Structure Of (Cd2+)1-Calbindin D9k Reveals
Details Of The Stepwise Structural Changes Along The
Apo--> (Ca2+) Ii1--> (Ca2+)i,Ii2 Binding Pathway
pdb|1CLB|A Chain A, Determination Of The Solution Structure Of Apo Calbindin
D9k By Nmr Spectroscopy
pdb|2BCA|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
Length = 76
Score = 26.6 bits (57), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 101 IDFVFRKLDLNDDGVVTLEEF 121
+D +F +LD N DG V+ EEF
Sbjct: 47 LDELFEELDKNGDGEVSFEEF 67
>pdb|2BCB|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
pdb|1B1G|A Chain A, Solvated Refinement Of Ca-Loaded Calbindin D9k
Length = 75
Score = 26.6 bits (57), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 101 IDFVFRKLDLNDDGVVTLEEF 121
+D +F +LD N DG V+ EEF
Sbjct: 46 LDELFEELDKNGDGEVSFEEF 66
>pdb|1N65|A Chain A, Family Of Nmr Solution Structures Of Ca Ce Calbindin D9k
In Denaturating Conditions
Length = 75
Score = 26.6 bits (57), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 101 IDFVFRKLDLNDDGVVTLEEF 121
+D +F +LD N DG V+ EEF
Sbjct: 46 LDELFEELDKNGDGEVSFEEF 66
>pdb|1HT9|A Chain A, Domain Swapping Ef-Hands
pdb|1HT9|B Chain B, Domain Swapping Ef-Hands
Length = 76
Score = 26.6 bits (57), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 101 IDFVFRKLDLNDDGVVTLEEF 121
+D +F +LD N DG V+ EEF
Sbjct: 47 LDELFEELDKNGDGEVSFEEF 67
>pdb|1BOC|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 76
Score = 26.6 bits (57), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 101 IDFVFRKLDLNDDGVVTLEEF 121
+D +F +LD N DG V+ EEF
Sbjct: 47 LDELFEELDKNGDGEVSFEEF 67
>pdb|3ENO|C Chain C, Crystal Structure Of Pyrococcus Furiosus Pcc1 In Complex
With Thermoplasma Acidophilum Kae1
pdb|3ENO|D Chain D, Crystal Structure Of Pyrococcus Furiosus Pcc1 In Complex
With Thermoplasma Acidophilum Kae1
pdb|3ENO|E Chain E, Crystal Structure Of Pyrococcus Furiosus Pcc1 In Complex
With Thermoplasma Acidophilum Kae1
pdb|3ENO|F Chain F, Crystal Structure Of Pyrococcus Furiosus Pcc1 In Complex
With Thermoplasma Acidophilum Kae1
Length = 87
Score = 26.2 bits (56), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Query: 10 VIRDSNLYAH----YVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDI 63
V+ ++ LY H Y D G D+ T S+ LRG++ LRW D+
Sbjct: 27 VVYEAVLYEHLSVPYRRSEIDFKLEGKKIILDIKATDSSALRGTVNSYLRWIKAAIDV 84
>pdb|2CCL|B Chain B, The S45a, T46a Mutant Of The Type I Cohesin-Dockerin
Complex From The Cellulosome Of Clostridium Thermocellum
pdb|2CCL|D Chain D, The S45a, T46a Mutant Of The Type I Cohesin-Dockerin
Complex From The Cellulosome Of Clostridium Thermocellum
Length = 63
Score = 26.2 bits (56), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Query: 60 LYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQID 102
L D+NGDG I+ ++LT + ++V + TD A KA+ +D
Sbjct: 4 LGDVNGDGTINSTDLTMLKRSVLRAI---TLTDDA-KARADVD 42
>pdb|3ENC|A Chain A, Crystal Structure Of Pyrococcus Furiosus Pcc1 Dimer
pdb|3ENC|B Chain B, Crystal Structure Of Pyrococcus Furiosus Pcc1 Dimer
Length = 87
Score = 26.2 bits (56), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Query: 10 VIRDSNLYAH----YVFKAFDVNCNGAISFRDLLVTLSTLLRGSIYEKLRWTFKLYDI 63
V+ ++ LY H Y D G D+ T S+ LRG++ LRW D+
Sbjct: 27 VVYEAVLYEHLSVPYRRSEIDFKLEGKKIILDIKATDSSALRGTVNSYLRWIKAAIDV 84
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
Length = 76
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 11/80 (13%)
Query: 52 EKLRWTFKLYDI-NGDG-CISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLD 109
E+++ F+++ GD IS+ EL ++Q + + K +D + ++D
Sbjct: 5 EEIKGAFEVFAAKEGDPNQISKEELKLVMQTLG---------PSLLKGMSTLDEMIEEVD 55
Query: 110 LNDDGVVTLEEFIESCLKVS 129
N DG V+ EEF+ K+S
Sbjct: 56 KNGDGEVSFEEFLVMMKKIS 75
>pdb|2SCP|A Chain A, Structure Of A Sarcoplasmic Calcium-Binding Protein From
Nereis Diversicolor Refined At 2.0 Angstroms Resolution
pdb|2SCP|B Chain B, Structure Of A Sarcoplasmic Calcium-Binding Protein From
Nereis Diversicolor Refined At 2.0 Angstroms Resolution
pdb|1Q80|A Chain A, Solution Structure And Dynamics Of Nereis Sarcoplasmic
Calcium Binding Protein
Length = 174
Score = 26.2 bits (56), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 13/65 (20%)
Query: 58 FKLYDINGDGCISRSELTQIVQAVHELMGRKNQTDAARKAKEQIDFVFRKLDLNDDGVVT 117
F+ D N D ISR E ++G A F +D N+DG+++
Sbjct: 100 FRAVDTNEDNNISRDEYGIFFG----MLGLDKTMAPAS---------FDAIDTNNDGLLS 146
Query: 118 LEEFI 122
LEEF+
Sbjct: 147 LEEFV 151
>pdb|1PON|A Chain A, Site Iii-Site Iv Troponin C Heterodimer, Nmr
pdb|1CTA|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTA|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
Length = 36
Score = 25.8 bits (55), Expect = 9.4, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 52 EKLRWTFKLYDINGDGCISRSELTQIVQA 80
E+L F+++D N DG I EL +I++A
Sbjct: 5 EELANAFRIFDKNADGYIDIEELGEILRA 33
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.134 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,804,598
Number of Sequences: 62578
Number of extensions: 135054
Number of successful extensions: 1080
Number of sequences better than 100.0: 267
Number of HSP's better than 100.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 62
Number of HSP's that attempted gapping in prelim test: 499
Number of HSP's gapped (non-prelim): 497
length of query: 150
length of database: 14,973,337
effective HSP length: 90
effective length of query: 60
effective length of database: 9,341,317
effective search space: 560479020
effective search space used: 560479020
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.7 bits)