Query psy12172
Match_columns 84
No_of_seqs 210 out of 1309
Neff 9.6
Searched_HMMs 29240
Date Fri Aug 16 20:32:08 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12172.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12172hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2lnl_A C-X-C chemokine recepto 99.7 6.4E-17 2.2E-21 100.1 7.7 76 5-82 10-85 (296)
2 2rh1_A Beta-2-adrenergic recep 99.7 6.6E-17 2.3E-21 106.5 7.6 79 4-82 38-116 (500)
3 4grv_A Neurotensin receptor ty 99.7 1E-16 3.6E-21 106.1 6.9 78 5-82 31-113 (510)
4 4amj_A Beta-1 adrenergic recep 99.7 8E-17 2.7E-21 99.5 5.3 81 2-82 7-87 (315)
5 1u19_A Rhodopsin; G protein-co 99.7 4.1E-16 1.4E-20 97.7 8.2 80 3-82 35-114 (349)
6 2ks9_A Substance-P receptor; w 99.7 4.3E-16 1.5E-20 98.4 8.3 76 7-82 33-108 (364)
7 4dkl_A MU-type opioid receptor 99.7 4.4E-16 1.5E-20 100.6 8.3 78 4-82 15-92 (464)
8 3vw7_A Proteinase-activated re 99.7 2.4E-16 8.1E-21 102.6 6.9 80 3-82 17-96 (484)
9 3rze_A Histamine H1 receptor, 99.7 9.2E-17 3.1E-21 103.6 4.7 80 3-82 5-84 (452)
10 3uon_A Human M2 muscarinic ace 99.6 2.7E-16 9.2E-21 101.8 6.7 77 6-82 23-99 (467)
11 4ea3_A Fusion protein of nocic 99.6 2.1E-15 7E-20 97.8 7.9 80 2-82 121-200 (434)
12 3sn6_R Lysozyme, beta-2 adrene 99.6 8.9E-16 3.1E-20 101.4 5.6 78 5-82 181-258 (514)
13 3pbl_A D(3) dopamine receptor, 99.6 8.5E-16 2.9E-20 99.9 5.3 77 6-82 38-115 (481)
14 3v2y_A Sphingosine 1-phosphate 99.6 3E-15 1E-19 99.2 7.7 75 7-82 64-138 (520)
15 2z73_A Rhodopsin; visual pigme 99.6 5.7E-15 1.9E-19 95.8 7.9 78 5-82 33-111 (448)
16 3odu_A C-X-C chemokine recepto 99.6 4.2E-15 1.4E-19 97.1 7.3 77 4-82 46-122 (502)
17 4eiy_A Adenosine receptor A2A/ 99.6 1.1E-14 3.8E-19 93.8 7.2 76 5-82 30-105 (447)
18 3eml_A Human adenosine A2A rec 99.5 9E-15 3.1E-19 95.0 5.5 75 6-82 21-95 (488)
19 2lot_A Apelin receptor; membra 97.2 1.9E-05 6.7E-10 39.1 -1.4 29 8-36 30-58 (64)
20 3arc_I Photosystem II reaction 31.3 37 0.0013 14.5 2.7 16 9-24 11-26 (38)
21 2lt8_A Eurocin; A/B-fold, cyst 21.4 33 0.0011 14.5 0.7 12 70-81 29-40 (42)
No 1
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.70 E-value=6.4e-17 Score=100.14 Aligned_cols=76 Identities=18% Similarity=0.395 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHhhHHhhcccCCCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhCccccccccceee
Q psy12172 5 WYQALGLTMICLGTMSMVGNGIVVYIFLCTKNLRTPSNILVVNLAFSDFCMMFSMAPTMVLNCFYETWTLGKFCLRFL 82 (84)
Q Consensus 5 ~~~~~~~~~~~~~~~g~~gN~~vl~~~~~~~~l~~~~~~~l~nLa~~D~l~~~~~~p~~~~~~~~~~~~~~~~~C~~~ 82 (84)
.+.+...+|.+++++|++||+++++++.++|++|+++|+++.|||++|++.++. .|....... ++|.+|+..|+..
T Consensus 10 ~~~i~~i~y~ii~i~gv~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~l~-~p~~~~~~~-~~~~~~~~~c~~~ 85 (296)
T 2lnl_A 10 NKYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALT-LPIWAASKV-NGWIFGTFLCKVV 85 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHHHH-HHHHHHHHH-SSSCCSSHHHHHH
T ss_pred hHHhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHh-hhHHHhhcc-CCCccchhHHHHH
Confidence 356778889999999999999999999999999999999999999999999876 666665544 5699999999864
No 2
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=99.69 E-value=6.6e-17 Score=106.54 Aligned_cols=79 Identities=24% Similarity=0.469 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHhhHHhhcccCCCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhCccccccccceee
Q psy12172 4 LWYQALGLTMICLGTMSMVGNGIVVYIFLCTKNLRTPSNILVVNLAFSDFCMMFSMAPTMVLNCFYETWTLGKFCLRFL 82 (84)
Q Consensus 4 ~~~~~~~~~~~~~~~~g~~gN~~vl~~~~~~~~l~~~~~~~l~nLa~~D~l~~~~~~p~~~~~~~~~~~~~~~~~C~~~ 82 (84)
.+......++.+++++|++||+++++++.+++++|+++|+|+.|||++|++.++..+|..+.....+.|.+|+..|++.
T Consensus 38 ~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~~~~w~~~~~~C~~~ 116 (500)
T 2rh1_A 38 VWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFW 116 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCSHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCcchhhHH
Confidence 3456678889999999999999999999999999999999999999999999999999999988889999999999865
No 3
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=99.67 E-value=1e-16 Score=106.05 Aligned_cols=78 Identities=19% Similarity=0.334 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHhhHHhhcccCCC---ChhHHHHHHHHHHHHHHHHHhhHHHHHHHhh--Cccccccccc
Q psy12172 5 WYQALGLTMICLGTMSMVGNGIVVYIFLCTKNLR---TPSNILVVNLAFSDFCMMFSMAPTMVLNCFY--ETWTLGKFCL 79 (84)
Q Consensus 5 ~~~~~~~~~~~~~~~g~~gN~~vl~~~~~~~~l~---~~~~~~l~nLa~~D~l~~~~~~p~~~~~~~~--~~~~~~~~~C 79 (84)
.+.++.++|.+++++|++||+++++++.++|++| +++|+|+.|||++|++++++.+|+.+..... +.|.+|+..|
T Consensus 31 ~~v~~~~~~~~i~~~g~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~~~~~~~~w~~g~~~C 110 (510)
T 4grv_A 31 SKVLVTAIYLALFVVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGDAGC 110 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSCSSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEhhHHHH
Confidence 4567788999999999999999999998876544 7889999999999999999999998887654 5699999999
Q ss_pred eee
Q psy12172 80 RFL 82 (84)
Q Consensus 80 ~~~ 82 (84)
++.
T Consensus 111 ~~~ 113 (510)
T 4grv_A 111 RGY 113 (510)
T ss_dssp HHH
T ss_pred HHH
Confidence 875
No 4
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.66 E-value=8e-17 Score=99.47 Aligned_cols=81 Identities=22% Similarity=0.360 Sum_probs=74.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhHHhhHHhhcccCCCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhCcccccccccee
Q psy12172 2 HPLWYQALGLTMICLGTMSMVGNGIVVYIFLCTKNLRTPSNILVVNLAFSDFCMMFSMAPTMVLNCFYETWTLGKFCLRF 81 (84)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~g~~gN~~vl~~~~~~~~l~~~~~~~l~nLa~~D~l~~~~~~p~~~~~~~~~~~~~~~~~C~~ 81 (84)
+++.+.....++.+++++|++||++++.++.+++++|+++|+++.|||++|++.++...|..+.....++|.+|+..|++
T Consensus 7 ~~~~~~~~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~ 86 (315)
T 4amj_A 7 SQQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCEL 86 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHSSCCSCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHHhccHHHHHHhcCCeeccccHHHH
Confidence 34566788889999999999999999999999999999999999999999999999889999988889999999999986
Q ss_pred e
Q psy12172 82 L 82 (84)
Q Consensus 82 ~ 82 (84)
.
T Consensus 87 ~ 87 (315)
T 4amj_A 87 W 87 (315)
T ss_dssp H
T ss_pred H
Confidence 5
No 5
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=99.66 E-value=4.1e-16 Score=97.67 Aligned_cols=80 Identities=25% Similarity=0.352 Sum_probs=72.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhHHhhHHhhcccCCCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhCccccccccceee
Q psy12172 3 PLWYQALGLTMICLGTMSMVGNGIVVYIFLCTKNLRTPSNILVVNLAFSDFCMMFSMAPTMVLNCFYETWTLGKFCLRFL 82 (84)
Q Consensus 3 ~~~~~~~~~~~~~~~~~g~~gN~~vl~~~~~~~~l~~~~~~~l~nLa~~D~l~~~~~~p~~~~~~~~~~~~~~~~~C~~~ 82 (84)
+........++.+++++|++||+++++++.+++++|++.|+++.|||++|++.++...|..+.....++|.+|+..|++.
T Consensus 35 ~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 114 (349)
T 1u19_A 35 PWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLE 114 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHhcchHHHHHHhcCeeeCChhHHHHH
Confidence 34456778889999999999999999999999999999999999999999999999999998888889999999999864
No 6
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=99.66 E-value=4.3e-16 Score=98.38 Aligned_cols=76 Identities=28% Similarity=0.403 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHHHHHhhHHhhHHhhcccCCCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhCccccccccceee
Q psy12172 7 QALGLTMICLGTMSMVGNGIVVYIFLCTKNLRTPSNILVVNLAFSDFCMMFSMAPTMVLNCFYETWTLGKFCLRFL 82 (84)
Q Consensus 7 ~~~~~~~~~~~~~g~~gN~~vl~~~~~~~~l~~~~~~~l~nLa~~D~l~~~~~~p~~~~~~~~~~~~~~~~~C~~~ 82 (84)
.....++.+++++|++||+++++++.++|++|+++|+++.|||++|++.++...|..+.....++|.+|+..|++.
T Consensus 33 ~~~~~~~~~i~~~gi~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~ 108 (364)
T 2ks9_A 33 VLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFH 108 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSCSSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhH
Confidence 4457889999999999999999999999999999999999999999999998899988888889999999999864
No 7
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=99.66 E-value=4.4e-16 Score=100.63 Aligned_cols=78 Identities=21% Similarity=0.373 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHhhHHhhcccCCCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhCccccccccceee
Q psy12172 4 LWYQALGLTMICLGTMSMVGNGIVVYIFLCTKNLRTPSNILVVNLAFSDFCMMFSMAPTMVLNCFYETWTLGKFCLRFL 82 (84)
Q Consensus 4 ~~~~~~~~~~~~~~~~g~~gN~~vl~~~~~~~~l~~~~~~~l~nLa~~D~l~~~~~~p~~~~~~~~~~~~~~~~~C~~~ 82 (84)
..+.....++.+++++|++||+++++++.+++++|+++|+++.|||++|++.++. .|..+.....++|.+|+..|++.
T Consensus 15 ~~~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~-~p~~~~~~~~~~~~~~~~~C~~~ 92 (464)
T 4dkl_A 15 VTAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATST-LPFQSVNYLMGTWPFGNILCKIV 92 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHSSCCSCSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCcccccchhhhH
Confidence 3456788899999999999999999999999999999999999999999999988 99998888899999999999865
No 8
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=99.65 E-value=2.4e-16 Score=102.55 Aligned_cols=80 Identities=14% Similarity=0.205 Sum_probs=68.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhHHhhHHhhcccCCCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhCccccccccceee
Q psy12172 3 PLWYQALGLTMICLGTMSMVGNGIVVYIFLCTKNLRTPSNILVVNLAFSDFCMMFSMAPTMVLNCFYETWTLGKFCLRFL 82 (84)
Q Consensus 3 ~~~~~~~~~~~~~~~~~g~~gN~~vl~~~~~~~~l~~~~~~~l~nLa~~D~l~~~~~~p~~~~~~~~~~~~~~~~~C~~~ 82 (84)
+..+.+...++.+++++|++||+++++++.+++++|+++|+|+.|||++|++.++...|........++|.+|+..|++.
T Consensus 17 ~~~~~~~~~~~~~i~~~~i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 96 (484)
T 3vw7_A 17 SWLTLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVSVLPFKISYYFSGSDWQFGSELCRFV 96 (484)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHTTHHHHHHHHHTTSCCCSCHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhHHhHH
Confidence 45567888899999999999999999999999999999999999999999999877444455555556899999999864
No 9
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=99.65 E-value=9.2e-17 Score=103.63 Aligned_cols=80 Identities=20% Similarity=0.313 Sum_probs=71.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhHHhhHHhhcccCCCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhCccccccccceee
Q psy12172 3 PLWYQALGLTMICLGTMSMVGNGIVVYIFLCTKNLRTPSNILVVNLAFSDFCMMFSMAPTMVLNCFYETWTLGKFCLRFL 82 (84)
Q Consensus 3 ~~~~~~~~~~~~~~~~~g~~gN~~vl~~~~~~~~l~~~~~~~l~nLa~~D~l~~~~~~p~~~~~~~~~~~~~~~~~C~~~ 82 (84)
+........++.+++++|++||+++++++.+++++|+++|+++.|||++|++.++...|..+.....++|.+|+..|++.
T Consensus 5 ~~~~~~~~~~~~~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~ 84 (452)
T 3rze_A 5 SPQLMPLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMSKWSLGRPLCLFW 84 (452)
T ss_dssp ----CGGGTHHHHHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCSSHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCchhHhHH
Confidence 34455677889999999999999999999999999999999999999999999999999999999999999999999865
No 10
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=99.65 E-value=2.7e-16 Score=101.81 Aligned_cols=77 Identities=19% Similarity=0.266 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHHHHHhhHHhhHHhhcccCCCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhCccccccccceee
Q psy12172 6 YQALGLTMICLGTMSMVGNGIVVYIFLCTKNLRTPSNILVVNLAFSDFCMMFSMAPTMVLNCFYETWTLGKFCLRFL 82 (84)
Q Consensus 6 ~~~~~~~~~~~~~~g~~gN~~vl~~~~~~~~l~~~~~~~l~nLa~~D~l~~~~~~p~~~~~~~~~~~~~~~~~C~~~ 82 (84)
..+...++.+++++|++||+++++++.+++++|+++|+++.|||++|++.+++..|..+.....+.|.+|+..|++.
T Consensus 23 ~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~ 99 (467)
T 3uon_A 23 VVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLW 99 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCCSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCcchHhHH
Confidence 46678889999999999999999999999999999999999999999999999999999999999999999999865
No 11
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.61 E-value=2.1e-15 Score=97.83 Aligned_cols=80 Identities=19% Similarity=0.304 Sum_probs=71.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhHHhhHHhhcccCCCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhCcccccccccee
Q psy12172 2 HPLWYQALGLTMICLGTMSMVGNGIVVYIFLCTKNLRTPSNILVVNLAFSDFCMMFSMAPTMVLNCFYETWTLGKFCLRF 81 (84)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~g~~gN~~vl~~~~~~~~l~~~~~~~l~nLa~~D~l~~~~~~p~~~~~~~~~~~~~~~~~C~~ 81 (84)
++..+.....++.+++++|++||+++++++.+++++|+++|+++.|||++|++. ....|........+.|.+++..|++
T Consensus 121 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LAvsDll~-~~~~p~~~~~~~~~~~~~~~~~C~~ 199 (434)
T 4ea3_A 121 PLGLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLV-LLTLPFQGTDILLGFWPFGNALCKT 199 (434)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHH-HTTHHHHHHHHHHTSCTTHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHeeeeeeecCccCchhHHHHHHHHHHHHHH-HHHhHHHHHHHHhcCCcCcccHHHH
Confidence 345567788899999999999999999999999999999999999999999998 5558999888888999999999986
Q ss_pred e
Q psy12172 82 L 82 (84)
Q Consensus 82 ~ 82 (84)
.
T Consensus 200 ~ 200 (434)
T 4ea3_A 200 V 200 (434)
T ss_dssp H
T ss_pred H
Confidence 4
No 12
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.60 E-value=8.9e-16 Score=101.36 Aligned_cols=78 Identities=26% Similarity=0.473 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHhhHHhhcccCCCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhCccccccccceee
Q psy12172 5 WYQALGLTMICLGTMSMVGNGIVVYIFLCTKNLRTPSNILVVNLAFSDFCMMFSMAPTMVLNCFYETWTLGKFCLRFL 82 (84)
Q Consensus 5 ~~~~~~~~~~~~~~~g~~gN~~vl~~~~~~~~l~~~~~~~l~nLa~~D~l~~~~~~p~~~~~~~~~~~~~~~~~C~~~ 82 (84)
.......++.+++++|++||+++++++.+++++|++.|+++.|||++|++.++...|..+.....+.|.+++..|++.
T Consensus 181 ~~~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~ 258 (514)
T 3sn6_R 181 WVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEFW 258 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHTSCCSCSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcCCeeCCcchhhhH
Confidence 345677889999999999999999999999999999999999999999999999899999999999999999999865
No 13
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.60 E-value=8.5e-16 Score=99.88 Aligned_cols=77 Identities=26% Similarity=0.398 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHHHHHHHhhHHhhHHhhcccCCCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhh-Cccccccccceee
Q psy12172 6 YQALGLTMICLGTMSMVGNGIVVYIFLCTKNLRTPSNILVVNLAFSDFCMMFSMAPTMVLNCFY-ETWTLGKFCLRFL 82 (84)
Q Consensus 6 ~~~~~~~~~~~~~~g~~gN~~vl~~~~~~~~l~~~~~~~l~nLa~~D~l~~~~~~p~~~~~~~~-~~~~~~~~~C~~~ 82 (84)
+.+...++.+++++|++||+++++++.+++++|+++|+++.|||++|++.++...|..+..... ++|.+++..|++.
T Consensus 38 ~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~C~~~ 115 (481)
T 3pbl_A 38 HAYYALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRICCDVF 115 (481)
T ss_dssp ---CCSHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTSCCCSCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCcchhhhH
Confidence 3455678899999999999999999999999999999999999999999999989988877666 6899999999865
No 14
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.60 E-value=3e-15 Score=99.22 Aligned_cols=75 Identities=19% Similarity=0.207 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHHHHhhHHhhHHhhcccCCCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhCccccccccceee
Q psy12172 7 QALGLTMICLGTMSMVGNGIVVYIFLCTKNLRTPSNILVVNLAFSDFCMMFSMAPTMVLNCFYETWTLGKFCLRFL 82 (84)
Q Consensus 7 ~~~~~~~~~~~~~g~~gN~~vl~~~~~~~~l~~~~~~~l~nLa~~D~l~~~~~~p~~~~~~~~~~~~~~~~~C~~~ 82 (84)
.+...++.+++++|++||+++++++.+++++|+++|+|+.|||++|+++++...|..+.. ..+.|.+++..|++.
T Consensus 64 ~~~~~~~~~i~~~g~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~~~p~~~~~-~~~~~~~~~~~c~~~ 138 (520)
T 3v2y_A 64 KLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLS-GATTYKLTPAQWFLR 138 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGGTTSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHHHHHc-cccceeeCccccchH
Confidence 577889999999999999999999999999999999999999999999999988887766 566888998888763
No 15
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.58 E-value=5.7e-15 Score=95.80 Aligned_cols=78 Identities=38% Similarity=0.746 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHhhHHhhcccCCCChhHHHHHHHHHHHHHHHHHh-hHHHHHHHhhCccccccccceee
Q psy12172 5 WYQALGLTMICLGTMSMVGNGIVVYIFLCTKNLRTPSNILVVNLAFSDFCMMFSM-APTMVLNCFYETWTLGKFCLRFL 82 (84)
Q Consensus 5 ~~~~~~~~~~~~~~~g~~gN~~vl~~~~~~~~l~~~~~~~l~nLa~~D~l~~~~~-~p~~~~~~~~~~~~~~~~~C~~~ 82 (84)
.......++.+++++|++||+++++++.++|++|++.|+++.|||++|++.+++. .|..+.....++|.+++..|++.
T Consensus 33 ~~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~~~~~~~~~~~C~~~ 111 (448)
T 2z73_A 33 VYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVY 111 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHHTTSCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHHHhccHHHHHHhcCCccCCHHHHHHH
Confidence 4556778889999999999999999999999999999999999999999999874 88888888888999999999864
No 16
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=99.58 E-value=4.2e-15 Score=97.05 Aligned_cols=77 Identities=19% Similarity=0.341 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHhhHHhhcccCCCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhCccccccccceee
Q psy12172 4 LWYQALGLTMICLGTMSMVGNGIVVYIFLCTKNLRTPSNILVVNLAFSDFCMMFSMAPTMVLNCFYETWTLGKFCLRFL 82 (84)
Q Consensus 4 ~~~~~~~~~~~~~~~~g~~gN~~vl~~~~~~~~l~~~~~~~l~nLa~~D~l~~~~~~p~~~~~~~~~~~~~~~~~C~~~ 82 (84)
..+.+...++.+++++|++||+++++++.+++++|+++|+|+.|||++|++.+ +..|..+..... +|.+|+..|++.
T Consensus 46 ~~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~l~~~~~~~l~~La~~Dll~~-~~~p~~~~~~~~-~~~~~~~~C~~~ 122 (502)
T 3odu_A 46 FNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFV-ITLPFWAVDAVA-NWYFGNFLCKAV 122 (502)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHHH-TTHHHHHHHHHT-CCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHhc-CCcCCchhhhhH
Confidence 34677888999999999999999999999999999999999999999999996 468888776655 799999999865
No 17
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.55 E-value=1.1e-14 Score=93.80 Aligned_cols=76 Identities=17% Similarity=0.217 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHhhHHhhcccCCCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhCccccccccceee
Q psy12172 5 WYQALGLTMICLGTMSMVGNGIVVYIFLCTKNLRTPSNILVVNLAFSDFCMMFSMAPTMVLNCFYETWTLGKFCLRFL 82 (84)
Q Consensus 5 ~~~~~~~~~~~~~~~g~~gN~~vl~~~~~~~~l~~~~~~~l~nLa~~D~l~~~~~~p~~~~~~~~~~~~~~~~~C~~~ 82 (84)
...+...++.+++++|++||+++++++.+++++|+++|+++.|||++|++.++...|..+.. ...|..++..|++.
T Consensus 30 ~~~~~~~i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~~p~~~~~--~~~~~~~~~~C~~~ 105 (447)
T 4eiy_A 30 GSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITI--STGFCAACHGCLFI 105 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHH--HTTCEEEHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHH--hcccccCccHHHHH
Confidence 45577888999999999999999999999999999999999999999999998889987764 34677788889864
No 18
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.53 E-value=9e-15 Score=94.98 Aligned_cols=75 Identities=17% Similarity=0.246 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHHHHHHHhhHHhhHHhhcccCCCChhHHHHHHHHHHHHHHHHHhhHHHHHHHhhCccccccccceee
Q psy12172 6 YQALGLTMICLGTMSMVGNGIVVYIFLCTKNLRTPSNILVVNLAFSDFCMMFSMAPTMVLNCFYETWTLGKFCLRFL 82 (84)
Q Consensus 6 ~~~~~~~~~~~~~~g~~gN~~vl~~~~~~~~l~~~~~~~l~nLa~~D~l~~~~~~p~~~~~~~~~~~~~~~~~C~~~ 82 (84)
..+...++.+++++|++||+++++++.+++++|+++|+++.|||++|++.++...|..+... ..|.++...|++.
T Consensus 21 ~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~--~~~~~~~~~C~~~ 95 (488)
T 3eml_A 21 SSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIS--TGFCAACHGCLFI 95 (488)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHTHHHHHHHHT--TCCEECHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccccccchHHHHH
Confidence 35677889999999999999999999999999999999999999999999998899877644 3688898999864
No 19
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A
Probab=97.22 E-value=1.9e-05 Score=39.11 Aligned_cols=29 Identities=17% Similarity=0.335 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHHhhHHhhHHhhcccC
Q psy12172 8 ALGLTMICLGTMSMVGNGIVVYIFLCTKN 36 (84)
Q Consensus 8 ~~~~~~~~~~~~g~~gN~~vl~~~~~~~~ 36 (84)
+...+|.+++++|++||+++++++.++|-
T Consensus 30 ~lp~~Y~lvFvlGl~GN~lvl~v~~~~~~ 58 (64)
T 2lot_A 30 LIPAIYMLVFLLGTTGNGLVLWTVFRKKG 58 (64)
T ss_dssp SSHHHHHHTTTTTTTSSSSHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHhhhhhheeeeeEecc
Confidence 56788999999999999999999887664
No 20
>3arc_I Photosystem II reaction center protein I; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_I* 2axt_I* 3bz1_I* 3bz2_I* 3kzi_I* 3prq_I* 3prr_I* 3a0b_I* 3a0h_I*
Probab=31.30 E-value=37 Score=14.54 Aligned_cols=16 Identities=6% Similarity=0.069 Sum_probs=8.8
Q ss_pred HHHHHHHHHHHHHHhh
Q psy12172 9 LGLTMICLGTMSMVGN 24 (84)
Q Consensus 9 ~~~~~~~~~~~g~~gN 24 (84)
...++..+++.|.+.|
T Consensus 11 vV~ffvsLFiFGfLsn 26 (38)
T 3arc_I 11 VVTFFVLLFVFGFLSG 26 (38)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHccccCC
Confidence 3444555666666554
No 21
>2lt8_A Eurocin; A/B-fold, cysteine stabilised, antimicrobial protein; NMR {Eurotium amstelodami}
Probab=21.35 E-value=33 Score=14.52 Aligned_cols=12 Identities=25% Similarity=0.445 Sum_probs=8.8
Q ss_pred Ccccccccccee
Q psy12172 70 ETWTLGKFCLRF 81 (84)
Q Consensus 70 ~~~~~~~~~C~~ 81 (84)
+.|.+|+..|..
T Consensus 29 gpwylghptctc 40 (42)
T 2lt8_A 29 GPWYLGHPTCTC 40 (42)
T ss_dssp CCSSSSSCEEEE
T ss_pred CccccCCCceee
Confidence 568888887753
Done!