RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy12173
(224 letters)
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 74.8 bits (183), Expect = 4e-17
Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 16/124 (12%)
Query: 54 KILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKGEYTLNIFELGGQENVR 113
++L+LG SGKST++KQ+ + T G T Q + ++F++GGQ + R
Sbjct: 8 RLLLLGAGESGKSTIVKQMRILHVV------LTSGIFETKFQVDKVNFHMFDVGGQRDER 61
Query: 114 RFWNTYFEDTDLLVFVVDSADP----------SKLPVAAMELKNLLGDQRLSTVPILVIA 163
R W F D ++FVV S+ ++L A K++ ++ L T+ +++
Sbjct: 62 RKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFL 121
Query: 164 NKQD 167
NKQD
Sbjct: 122 NKQD 125
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 71.9 bits (175), Expect = 2e-16
Identities = 51/150 (34%), Positives = 82/150 (54%), Gaps = 5/150 (3%)
Query: 54 KILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKGEYTLNIFELGGQENVR 113
+IL+LGLD +GK+T++ ++ G S PT GFN+ + N++++GGQ+ +R
Sbjct: 14 RILMLGLDAAGKTTILYKLKLGQ---SVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIR 70
Query: 114 RFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVPILVIANKQDVPGALS 173
W Y+ T L+FVVD AD ++ A EL ++ D+ + IL+ ANKQD+P A+
Sbjct: 71 PLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMK 130
Query: 174 AEEVGVALDLSSISSRQHRIKLIATQAPSN 203
E+ L L+ I R + + A S
Sbjct: 131 PHEIQEKLGLTRI--RDRNWYVQPSCATSG 158
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 71.6 bits (174), Expect = 5e-16
Identities = 31/132 (23%), Positives = 54/132 (40%), Gaps = 10/132 (7%)
Query: 53 RKILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKGEYTLNIFELGGQENV 112
R +L +GL +SGK+ L ++ +G + + + I + N L
Sbjct: 1 RAVLFVGLCDSGKTLLFVRLLTGQYRDTQ---TSITDSSAIYKVNNNRGNSLTLIDLPGH 57
Query: 113 RRF----WNTYFEDTDLLVFVVDSADPSK-LPVAAMELKNLLGDQRLS--TVPILVIANK 165
+ + +VFVVDSA + + A L +L D + +L+ NK
Sbjct: 58 ESLRFQLLDRFKSSARAVVFVVDSAAFQREVKDVAEFLYQVLIDSMALKNSPSLLIACNK 117
Query: 166 QDVPGALSAEEV 177
QD+ A SA+ +
Sbjct: 118 QDIAMAKSAKLI 129
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 68.4 bits (166), Expect = 4e-15
Identities = 61/140 (43%), Positives = 95/140 (67%), Gaps = 3/140 (2%)
Query: 54 KILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKGEYTLNIFELGGQENVR 113
+IL+LGLDN+GK+TL+KQ++S + S T+GFNI +Q + LN++++GGQ +R
Sbjct: 18 RILLLGLDNAGKTTLLKQLASEDISHITP---TQGFNIKSVQSQGFKLNVWDIGGQRKIR 74
Query: 114 RFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVPILVIANKQDVPGALS 173
+W +YFE+TD+L++V+DSAD + EL LL +++LS VP+L+ ANKQD+ A
Sbjct: 75 PYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQDLLTAAP 134
Query: 174 AEEVGVALDLSSISSRQHRI 193
A E+ L+L +I R +I
Sbjct: 135 ASEIAEGLNLHTIRDRVWQI 154
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 68.5 bits (166), Expect = 4e-15
Identities = 59/147 (40%), Positives = 89/147 (60%), Gaps = 5/147 (3%)
Query: 54 KILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKGEYTLNIFELGGQENVR 113
+ILILGLD +GK+T++ ++ G KPT GFN+ L LN+++LGGQ ++R
Sbjct: 19 RILILGLDGAGKTTILYRLQIGE---VVTTKPTIGFNVETLSYKNLKLNVWDLGGQTSIR 75
Query: 114 RFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVPILVIANKQDVPGALS 173
+W Y+ DT ++FVVDS D ++ A+ EL +L ++ L +LV ANKQD PGALS
Sbjct: 76 PYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFANKQDQPGALS 135
Query: 174 AEEVGVALDLSSISSRQHRIKLIATQA 200
A EV L+L + + ++A+ A
Sbjct: 136 ASEVSKELNLVEL--KDRSWSIVASSA 160
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 68.2 bits (166), Expect = 5e-15
Identities = 20/127 (15%), Positives = 45/127 (35%), Gaps = 2/127 (1%)
Query: 54 KILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQ--KGEYTLNIFELGGQEN 111
K+L++G GK+ ++ + S + + F I ++ L I++ GQE
Sbjct: 8 KLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQER 67
Query: 112 VRRFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVPILVIANKQDVPGA 171
R Y+ ++ V D + ++N+ +++
Sbjct: 68 FRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKR 127
Query: 172 LSAEEVG 178
++E G
Sbjct: 128 QVSKERG 134
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 67.6 bits (164), Expect = 1e-14
Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 15/124 (12%)
Query: 54 KILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKGEYTLNIFELGGQENVR 113
KIL+LG SGKST +KQ+ + H PT+G + + + ++GGQ + R
Sbjct: 4 KILLLGAGESGKSTFLKQM-----RIIHGQDPTKGIHEYDFEIKNVPFKMVDVGGQRSER 58
Query: 114 RFWNTYFEDTDLLVFVVDSADPSKL----------PVAAMELKNLLGDQRLSTVPILVIA 163
+ W F+ ++F+V S++ ++ + + ++ ++ S V I++
Sbjct: 59 KRWFECFDSVTSILFLVSSSEFDQVLMEDRQTNRLTESLNIFETIVNNRVFSNVSIILFL 118
Query: 164 NKQD 167
NK D
Sbjct: 119 NKTD 122
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 65.4 bits (158), Expect = 3e-14
Identities = 52/147 (35%), Positives = 86/147 (58%), Gaps = 5/147 (3%)
Query: 54 KILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKGEYTLNIFELGGQENVR 113
+IL++GLD +GK+T++ ++ G + PT GFN+ ++ + ++++GGQ+ +R
Sbjct: 2 RILMVGLDAAGKTTILYKLKLGEIVTTI---PTIGFNVETVEYKNISFTVWDVGGQDKIR 58
Query: 114 RFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVPILVIANKQDVPGALS 173
W YF++T L+FVVDS D ++ A EL +L + L +LV ANKQD+P A++
Sbjct: 59 PLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMN 118
Query: 174 AEEVGVALDLSSISSRQHRIKLIATQA 200
A E+ L L S+ R + AT A
Sbjct: 119 AAEITDKLGLHSL--RHRNWYIQATCA 143
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 65.1 bits (157), Expect = 5e-14
Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 3/138 (2%)
Query: 54 KILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKGEYTLNIFELGGQENVR 113
K+L LGLDN+GK+TL+ + + + L+PT L G F+LGG R
Sbjct: 2 KLLFLGLDNAGKTTLLHMLKNDRLA---TLQPTWHPTSEELAIGNIKFTTFDLGGHIQAR 58
Query: 114 RFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVPILVIANKQDVPGALS 173
R W YF + + +VF+VD+ADP + A +EL L L VP +++ NK D P A+S
Sbjct: 59 RLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNAVS 118
Query: 174 AEEVGVALDLSSISSRQH 191
E+ AL L + + Q
Sbjct: 119 EAELRSALGLLNTTGSQR 136
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 64.3 bits (155), Expect = 1e-13
Identities = 62/140 (44%), Positives = 96/140 (68%), Gaps = 3/140 (2%)
Query: 54 KILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKGEYTLNIFELGGQENVR 113
++L+LGLDN+GK+T++K+ + + + PT GFNI L+ + LNI+++GGQ+++R
Sbjct: 4 RLLMLGLDNAGKTTILKKFNGEDVD---TISPTLGFNIKTLEHRGFKLNIWDVGGQKSLR 60
Query: 114 RFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVPILVIANKQDVPGALS 173
+W YFE TD L++VVDSAD ++ EL++LL ++RL+ +L+ ANKQD+PGALS
Sbjct: 61 SYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALS 120
Query: 174 AEEVGVALDLSSISSRQHRI 193
+ AL+L SI S RI
Sbjct: 121 CNAIQEALELDSIRSHHWRI 140
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 64.3 bits (155), Expect = 1e-13
Identities = 50/149 (33%), Positives = 85/149 (57%), Gaps = 5/149 (3%)
Query: 52 QRKILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKGEYTLNIFELGGQEN 111
+ K++I+GLDN+GK+T++ Q S + PT G N+ + ++++GGQE+
Sbjct: 15 EHKVIIVGLDNAGKTTILYQFSMNEVVHTS---PTIGSNVEEIVINNTRFLMWDIGGQES 71
Query: 112 VRRFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVPILVIANKQDVPGA 171
+R WNTY+ +T+ ++ VVDS D ++ V EL +L + L +L+ ANKQDV
Sbjct: 72 LRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKEC 131
Query: 172 LSAEEVGVALDLSSISSRQHRIKLIATQA 200
++ E+ L L+SI + H+ + A A
Sbjct: 132 MTVAEISQFLKLTSI--KDHQWHIQACCA 158
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 63.6 bits (154), Expect = 2e-13
Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 6/87 (6%)
Query: 54 KILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITI----LQKGEYTLNIFELGGQ 109
KIL++G GKS L+ + + + T G + I + + L I++ GQ
Sbjct: 4 KILLIGDSGVGKSCLLVRFVED--KFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAGQ 61
Query: 110 ENVRRFWNTYFEDTDLLVFVVDSADPS 136
E R Y+ ++ V D D
Sbjct: 62 ERFRTITTAYYRGAMGIILVYDITDER 88
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 62.8 bits (151), Expect = 7e-13
Identities = 51/175 (29%), Positives = 82/175 (46%), Gaps = 7/175 (4%)
Query: 52 QRKILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKGEYTLNIFELGGQEN 111
K++ LGLDN+GK+TL+ + PT L T F+LGG
Sbjct: 13 TGKLVFLGLDNAGKTTLLHMLKDDRL---GQHVPTLHPTSEELTIAGMTFTTFDLGGHIQ 69
Query: 112 VRRFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVPILVIANKQDVPGA 171
RR W Y + +VF+VD AD +L + EL +L+ D+ ++ VPIL++ NK D P A
Sbjct: 70 ARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEA 129
Query: 172 LSAEEVGVALDLSSISSRQHRIKLIATQAPSNLHHLHVSVVEAE---QAMYALSQ 223
+S E + L ++ + + L A L SV++ + + ++Q
Sbjct: 130 ISEERLREMFGLYGQTTGKGSVSLKELNA-RPLEVFMCSVLKRQGYGEGFRWMAQ 183
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 61.2 bits (147), Expect = 1e-12
Identities = 50/147 (34%), Positives = 86/147 (58%), Gaps = 4/147 (2%)
Query: 54 KILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKGEYTLNIFELGGQENVR 113
++ ++GL SGK+T + I+SG + ++ PT GFN+ + KG T+ ++++GGQ R
Sbjct: 4 ELTLVGLQYSGKTTFVNVIASGQ--FNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFR 61
Query: 114 RFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVPILVIANKQDVPGALS 173
W Y +V++VD+AD K+ + EL NLL +L +P+LV+ NK+D+PGAL
Sbjct: 62 SMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLPGALD 121
Query: 174 AEEVGVALDLSSISSRQHRIKLIATQA 200
+E+ ++LS+I + I +
Sbjct: 122 EKELIEKMNLSAI--QDREICCYSISC 146
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 61.9 bits (149), Expect = 2e-12
Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 17/124 (13%)
Query: 54 KILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKGEYTLNIFELGGQENVR 113
K+L+LG SGKST++KQ+ + G T + +F++GGQ + R
Sbjct: 4 KLLLLGAGESGKSTIVKQMKIIHE-------AGTGIVETHFTFKDLHFKMFDVGGQRSER 56
Query: 114 RFWNTYFEDTDLLVFVVDSADPSKLPVAAM----------ELKNLLGDQRLSTVPILVIA 163
+ W FE ++F V +D + ++ ++ + I++
Sbjct: 57 KKWIHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSIILFL 116
Query: 164 NKQD 167
NK+D
Sbjct: 117 NKKD 120
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 61.4 bits (148), Expect = 2e-12
Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 3/116 (2%)
Query: 54 KILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQ--KGEYTLNIFELGGQEN 111
K++++G GKS L+ + + +L F +Q I++ GQE
Sbjct: 6 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 65
Query: 112 VRRFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVPILVIANKQD 167
RR + Y+ + V D A LK L D S + I+++ NK D
Sbjct: 66 YRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELR-DHADSNIVIMLVGNKSD 120
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 60.3 bits (145), Expect = 6e-12
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 9/125 (7%)
Query: 45 SKVDDIFQRKILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITI----LQKGEYT 100
S+ D +F K+L++G GKS L+ + S + +++ T G + I L
Sbjct: 1 SEYDYLF--KLLLIGNSGVGKSCLLLRFSDD--TYTNDYISTIGVDFKIKTVELDGKTVK 56
Query: 101 LNIFELGGQENVRRFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVPIL 160
L I++ GQE R ++Y+ + ++ V D D + STV L
Sbjct: 57 LQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQES-FNGVKMWLQEIDRYATSTVLKL 115
Query: 161 VIANK 165
++ NK
Sbjct: 116 LVGNK 120
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 60.0 bits (144), Expect = 9e-12
Identities = 28/126 (22%), Positives = 55/126 (43%), Gaps = 14/126 (11%)
Query: 52 QRKILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKGEYTLNIFELGGQEN 111
+ K+L+LG SGKST IKQ+ + + PT G + ++GGQ +
Sbjct: 2 ELKLLLLGTGESGKSTFIKQMRIIHG----SGVPTTGIIEYPFDLQSVIFRMVDVGGQRS 57
Query: 112 VRRFWNTYFEDTDLLVFVVDSADP----------SKLPVAAMELKNLLGDQRLSTVPILV 161
RR W FE+ ++F+V ++ +++ + + ++ +++
Sbjct: 58 ERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVIL 117
Query: 162 IANKQD 167
NK+D
Sbjct: 118 FLNKKD 123
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 57.1 bits (137), Expect = 6e-11
Identities = 21/116 (18%), Positives = 42/116 (36%), Gaps = 2/116 (1%)
Query: 54 KILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQ--KGEYTLNIFELGGQEN 111
KI+++G GK+ L+++ + G F I ++ + L I++ GQE
Sbjct: 7 KIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQER 66
Query: 112 VRRFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVPILVIANKQD 167
R +Y+ + L+ D L+ + + +LV
Sbjct: 67 FRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDL 122
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 56.4 bits (135), Expect = 8e-11
Identities = 16/96 (16%), Positives = 34/96 (35%), Gaps = 2/96 (2%)
Query: 54 KILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITIL--QKGEYTLNIFELGGQEN 111
KILI+G + GK++ + + + + + + F + + L I++ GQE
Sbjct: 7 KILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQER 66
Query: 112 VRRFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKN 147
R Y+ + + D +
Sbjct: 67 YRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQ 102
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 55.7 bits (133), Expect = 2e-10
Identities = 24/113 (21%), Positives = 37/113 (32%), Gaps = 3/113 (2%)
Query: 54 KILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKG--EYTLNIFELGGQEN 111
K L++G +GKS L+ Q N F I+ G L I++ GQE
Sbjct: 7 KFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQER 66
Query: 112 VRRFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVPILVIAN 164
R +Y+ + V D A + I++ N
Sbjct: 67 FRSVTRSYYRGAAGALLVYDITSRETYN-ALTNWLTDARMLASQNIVIILCGN 118
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 55.8 bits (133), Expect = 3e-10
Identities = 24/135 (17%), Positives = 54/135 (40%), Gaps = 12/135 (8%)
Query: 51 FQRKILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKGEYTLNIFELGGQE 110
+Q I+I G NSGK++L+ +++ + + ++ + + + G
Sbjct: 2 YQPSIIIAGPQNSGKTSLLTLLTTDSVRPTV----VSQEPLSAADYDGSGVTLVDFPGHV 57
Query: 111 NVRRFWNTYF----EDTDLLVFVVDSADPSKLPVAAME----LKNLLGDQRLSTVPILVI 162
+R + Y + L+F+VDS K E + ++ + + IL+
Sbjct: 58 KLRYKLSDYLKTRAKFVKGLIFMVDSTVDPKKLTTTAEFLVDILSITESSCENGIDILIA 117
Query: 163 ANKQDVPGALSAEEV 177
NK ++ A ++
Sbjct: 118 CNKSELFTARPPSKI 132
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 54.5 bits (130), Expect = 5e-10
Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 2/85 (2%)
Query: 54 KILILGLDNSGKSTLIKQISSG--NTSLSHNLKPTEGFNITILQKGEYTLNIFELGGQEN 111
KILI+G GKS+L+ + + + L+ + + + L I++ GQE
Sbjct: 9 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQER 68
Query: 112 VRRFWNTYFEDTDLLVFVVDSADPS 136
R +Y+ ++ V D
Sbjct: 69 FRTLTPSYYRGAQGVILVYDVTRRD 93
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 54.1 bits (129), Expect = 7e-10
Identities = 24/128 (18%), Positives = 43/128 (33%), Gaps = 16/128 (12%)
Query: 54 KILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEG--------------FNITILQKGEY 99
K+L LG GK+T + + + + T G N + + +
Sbjct: 7 KLLALGDSGVGKTTFLYRYTDN--KFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 64
Query: 100 TLNIFELGGQENVRRFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVPI 159
L +++ GQE R +F D + + D + L + I
Sbjct: 65 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDI 124
Query: 160 LVIANKQD 167
++I NK D
Sbjct: 125 VLIGNKAD 132
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 53.3 bits (127), Expect = 1e-09
Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 3/116 (2%)
Query: 54 KILILGLDNSGKSTLIKQISSG--NTSLSHNLKPTEGFNITILQKGEYTLNIFELGGQEN 111
K +I+G GKS L+ Q + H + G I + + L I++ GQE
Sbjct: 6 KYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQER 65
Query: 112 VRRFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVPILVIANKQD 167
R +Y+ + V D S + L + + I++I NK D
Sbjct: 66 FRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDAR-NLTNPNTVIILIGNKAD 120
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 51.4 bits (122), Expect = 6e-09
Identities = 22/153 (14%), Positives = 53/153 (34%), Gaps = 9/153 (5%)
Query: 54 KILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNIT---ILQKGEYTLNIFELGGQE 110
K++++G GK+ L+ + G + + + L +++ GQE
Sbjct: 8 KVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQE 67
Query: 111 NVRRFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVPILVIANKQDVPG 170
R + Y+ D L+ + D + + L + + +L+
Sbjct: 68 RFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVDSAHE 127
Query: 171 ALSAEEVGVALDLSSISSRQHRIKLIATQAPSN 203
+ E G L ++++ + + T A +
Sbjct: 128 RVVKREDGEKL------AKEYGLPFMETSAKTG 154
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 50.5 bits (119), Expect = 1e-08
Identities = 45/147 (30%), Positives = 87/147 (59%), Gaps = 5/147 (3%)
Query: 54 KILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKGEYTLNIFELGGQENVR 113
+ILILGLD +GK+T++ ++ G + PT GFN+ + +++LGG ++R
Sbjct: 7 RILILGLDGAGKTTILYRLQVGEVVTTI---PTIGFNVETVTYKNLKFQVWDLGGLTSIR 63
Query: 114 RFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVPILVIANKQDVPGALS 173
+W Y+ +TD +++VVDS D ++ ++ EL +L ++ L ++V ANKQD+ A++
Sbjct: 64 PYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMT 123
Query: 174 AEEVGVALDLSSISSRQHRIKLIATQA 200
+ E+ +L L ++ + + ++ T A
Sbjct: 124 SSEMANSLGLPAL--KDRKWQIFKTSA 148
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 50.6 bits (120), Expect = 1e-08
Identities = 25/116 (21%), Positives = 44/116 (37%), Gaps = 3/116 (2%)
Query: 54 KILILGLDNSGKSTLIKQISSG--NTSLSHNLKPTEGFNITILQKGEYTLNIFELGGQEN 111
K +I+G GKS L+ Q + + G + + + L I++ GQE+
Sbjct: 5 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQES 64
Query: 112 VRRFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVPILVIANKQD 167
R +Y+ + V D L++ S + I++I NK D
Sbjct: 65 FRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDAR-QHSSSNMVIMLIGNKSD 119
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 49.5 bits (117), Expect = 3e-08
Identities = 23/117 (19%), Positives = 41/117 (35%), Gaps = 5/117 (4%)
Query: 54 KILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQ---KGEYTLNIFELGGQE 110
K+++LG GKS L Q +G + PT L I + G E
Sbjct: 5 KVVVLGSGGVGKSALTVQFVTG--TFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTE 62
Query: 111 NVRRFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVPILVIANKQD 167
+ Y ++ + V + ++ +R VP++++ NK D
Sbjct: 63 QFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEKVPVILVGNKVD 119
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 48.5 bits (114), Expect = 6e-08
Identities = 23/121 (19%), Positives = 50/121 (41%), Gaps = 7/121 (5%)
Query: 54 KILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITI----LQKGEYTLNIFELGGQ 109
KI+++G N GK+ L + +G + T G + + + +++ GQ
Sbjct: 4 KIIVIGDSNVGKTCLTYRFCAG--RFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQ 61
Query: 110 ENVRR-FWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVPILVIANKQDV 168
E R+ Y+ + +VFV D + + ++ + +P +++ NK D+
Sbjct: 62 ERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDIPRILVGNKCDL 121
Query: 169 P 169
Sbjct: 122 R 122
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 48.1 bits (113), Expect = 1e-07
Identities = 19/98 (19%), Positives = 33/98 (33%), Gaps = 2/98 (2%)
Query: 50 IFQRKILILGLDNSGKSTLIKQISSG--NTSLSHNLKPTEGFNITILQKGEYTLNIFELG 107
I Q K+++LG GKS+L+ + G + + L I++
Sbjct: 4 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 63
Query: 108 GQENVRRFWNTYFEDTDLLVFVVDSADPSKLPVAAMEL 145
GQE Y+ + V D + A +
Sbjct: 64 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWV 101
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 47.3 bits (111), Expect = 1e-07
Identities = 25/116 (21%), Positives = 49/116 (42%), Gaps = 3/116 (2%)
Query: 54 KILILGLDNSGKSTLIKQISSG--NTSLSHNLKPTEGFNITILQKGEYTLNIFELGGQEN 111
K++ LG + GK++LI + + + + L+ L +++ GQE
Sbjct: 2 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQER 61
Query: 112 VRRFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVPILVIANKQD 167
R +Y D+ V V D + + + ++ +R S V I+++ NK D
Sbjct: 62 FRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVR-TERGSDVIIMLVGNKTD 116
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 46.2 bits (108), Expect = 5e-07
Identities = 18/117 (15%), Positives = 43/117 (36%), Gaps = 2/117 (1%)
Query: 54 KILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKGE-YTLNIFELGGQENV 112
K +++G GK+ L+ ++ + + ++ ++ G+ L +++ GQE+
Sbjct: 7 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDY 66
Query: 113 RRFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVPILVIANKQDVP 169
R + TD + + S PI+++ K D+
Sbjct: 67 DRLRPLSYPQTD-VSLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLR 122
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 45.7 bits (107), Expect = 5e-07
Identities = 24/115 (20%), Positives = 44/115 (38%), Gaps = 1/115 (0%)
Query: 54 KILILGLDNSGKSTLIKQISSGNTSLSHNLKPTE-GFNITILQKGEYTLNIFELGGQENV 112
K++++G GKS L Q + + +L E ++I + GQE+
Sbjct: 6 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDY 65
Query: 113 RRFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVPILVIANKQD 167
+ YF + + V + A + +L + VP L++ NK D
Sbjct: 66 AAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGNKSD 120
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 44.9 bits (105), Expect = 1e-06
Identities = 29/133 (21%), Positives = 52/133 (39%), Gaps = 5/133 (3%)
Query: 54 KILILGLDNSGKSTLIKQISSG--NTSLSHNLKPTEGFNITILQKGEYTLNIFELGGQEN 111
K+++LG GKS+L+ + + +T L H + + T+ I++ GQE
Sbjct: 8 KVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQER 67
Query: 112 VRRFWNTYFEDTD---LLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVPILVIANKQDV 168
R ++ +D L V DS L E + + P +++ NK D+
Sbjct: 68 FRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKIDI 127
Query: 169 PGALSAEEVGVAL 181
+ E A
Sbjct: 128 SERQVSTEEAQAW 140
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 43.8 bits (102), Expect = 2e-06
Identities = 18/93 (19%), Positives = 41/93 (44%), Gaps = 12/93 (12%)
Query: 54 KILILGLDNSGKSTLIKQISSGNTSLSHNLK-----------PTEGFNITILQKGEYTLN 102
+++I+G N GKSTL+ ++ + + ++ ++ G I+
Sbjct: 2 RMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRGILFRIVDTAGVRSE 61
Query: 103 IFELGGQENVRRFWNTYFEDTDLLVFVVDSADP 135
+L + + R E D+++FV+D++ P
Sbjct: 62 TNDLVERLGIERTLQE-IEKADIVLFVLDASSP 93
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 43.1 bits (100), Expect = 5e-06
Identities = 27/152 (17%), Positives = 55/152 (36%), Gaps = 5/152 (3%)
Query: 54 KILILGLDNSGKSTLIKQISSG--NTSLSHNLKPTEGFNITILQKGEYTLNIFELGGQEN 111
K+++LG GKS+++ + S + + + + I++ GQE
Sbjct: 5 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQER 64
Query: 112 VRRFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVPILVIANKQDVPGA 171
Y+ + + V D P A +K L +Q + I ++ NK D+
Sbjct: 65 FASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKE-LHEQASKDIIIALVGNKIDMLQE 123
Query: 172 LSAEEVGVALDLSSISSRQHRIKLIATQAPSN 203
+ VA + + + + T A +
Sbjct: 124 GGERK--VAREEGEKLAEEKGLLFFETSAKTG 153
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 43.1 bits (100), Expect = 6e-06
Identities = 24/119 (20%), Positives = 43/119 (36%), Gaps = 6/119 (5%)
Query: 54 KILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFN---ITILQKGEYTLNIFELGGQE 110
K +++G GK+ L+ ++ PT N ++ YTL +F+ GQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTN--KFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQE 62
Query: 111 NVRRFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVPILVIANKQDVP 169
+ R + TD+ + PS E P L++ + D+
Sbjct: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFE-NVKEKWVPEITHHCPKTPFLLVGTQIDLR 120
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 42.3 bits (98), Expect = 1e-05
Identities = 25/121 (20%), Positives = 49/121 (40%), Gaps = 6/121 (4%)
Query: 52 QRKILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKGE---YTLNIFELGG 108
++K++I+G GK+ L+ S PT N + + L +++ G
Sbjct: 2 RKKLVIVGDGACGKTCLLIVNSKD--QFPEVYVPTVFENYVADIEVDGKQVELALWDTAG 59
Query: 109 QENVRRFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVPILVIANKQDV 168
E+ R + DTD+++ P L + + VPI+++ NK+D+
Sbjct: 60 LEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKKDL 118
Query: 169 P 169
Sbjct: 119 R 119
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 42.0 bits (97), Expect = 1e-05
Identities = 15/88 (17%), Positives = 31/88 (35%), Gaps = 2/88 (2%)
Query: 54 KILILGLDNSGKSTLIKQISSG--NTSLSHNLKPTEGFNITILQKGEYTLNIFELGGQEN 111
K++++G GKS++I++ G + + + L +++ GQE
Sbjct: 4 KMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEE 63
Query: 112 VRRFWNTYFEDTDLLVFVVDSADPSKLP 139
Y+ V V + D
Sbjct: 64 FDAITKAYYRGAQACVLVFSTTDRESFE 91
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 41.1 bits (95), Expect = 2e-05
Identities = 22/115 (19%), Positives = 42/115 (36%), Gaps = 1/115 (0%)
Query: 54 KILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKGE-YTLNIFELGGQENV 112
K+++LG GKS L Q G ++ + + + + L I + G E
Sbjct: 5 KLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGTEQF 64
Query: 113 RRFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVPILVIANKQD 167
+ Y ++ V S + +L + VP++++ NK D
Sbjct: 65 TAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCD 119
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 40.7 bits (94), Expect = 3e-05
Identities = 18/88 (20%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
Query: 51 FQRKILILGLDNSGKSTLIKQISSG--NTSLSHNLKPTEGFNITILQKGEYTLNIFELGG 108
+ K+++LG GK++L+ + N L + + L I++ G
Sbjct: 2 YSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLGASFLTKKLNIGGKRVNLAIWDTAG 61
Query: 109 QENVRRFWNTYFEDTDLLVFVVDSADPS 136
QE Y+ D++ + V D D
Sbjct: 62 QERFHALGPIYYRDSNGAILVYDITDED 89
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 40.8 bits (94), Expect = 4e-05
Identities = 28/121 (23%), Positives = 47/121 (38%), Gaps = 9/121 (7%)
Query: 54 KILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEG----FNITILQKGEYTLNIFELGGQ 109
K++ILG GK++L+ Q + S+ K T G ++ T+ I++ GQ
Sbjct: 4 KVIILGDSGVGKTSLMNQYVNK--KFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 61
Query: 110 ENVRRFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLL---GDQRLSTVPILVIANKQ 166
E + ++ D V V D P+ L + P +V+ NK
Sbjct: 62 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 121
Query: 167 D 167
D
Sbjct: 122 D 122
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 40.4 bits (93), Expect = 4e-05
Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 9/85 (10%)
Query: 49 DIFQRKILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEG-----FNITILQKGEYTLNI 103
+I K++ILG GK++L+ + + S K T G +T+ T+ +
Sbjct: 1 NIL--KVIILGDSGVGKTSLMHRYVND--KYSQQYKATIGADFLTKEVTVDGDKVATMQV 56
Query: 104 FELGGQENVRRFWNTYFEDTDLLVF 128
++ GQE + ++ D V
Sbjct: 57 WDTAGQERFQSLGVAFYRGADCCVL 81
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 40.0 bits (92), Expect = 5e-05
Identities = 21/115 (18%), Positives = 46/115 (40%), Gaps = 1/115 (0%)
Query: 54 KILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKGE-YTLNIFELGGQENV 112
K++++G GKS L Q+ + ++ + + ++ GE L+I + GQE
Sbjct: 5 KLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEY 64
Query: 113 RRFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVPILVIANKQD 167
+ Y + + V + + + + VP++++ NK D
Sbjct: 65 SAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCD 119
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 40.0 bits (92), Expect = 6e-05
Identities = 21/115 (18%), Positives = 43/115 (37%), Gaps = 1/115 (0%)
Query: 54 KILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKGE-YTLNIFELGGQENV 112
K++++G GKS L Q ++ + + + L++ + GQE
Sbjct: 6 KLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEEF 65
Query: 113 RRFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVPILVIANKQD 167
Y D + V D + + +L + + P++++ANK D
Sbjct: 66 SAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVD 120
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 40.0 bits (92), Expect = 6e-05
Identities = 22/122 (18%), Positives = 46/122 (37%), Gaps = 6/122 (4%)
Query: 52 QRKILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKGE---YTLNIFELGG 108
+ KI+++G GK+ L+ + N PT N T + + L++++ G
Sbjct: 2 KCKIVVVGDSQCGKTALLHVFAKD--CFPENYVPTVFENYTASFEIDTQRIELSLWDTSG 59
Query: 109 QENVRRFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVPILVIANKQDV 168
+ D+D ++ D + P L + K + +L++ K D+
Sbjct: 60 SPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKG-EIQEFCPNTKMLLVGCKSDL 118
Query: 169 PG 170
Sbjct: 119 RT 120
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 38.9 bits (89), Expect = 2e-04
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 1/117 (0%)
Query: 52 QRKILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKGEYTLNIFELG-GQE 110
K++++G GKS L Q ++ + + G GQE
Sbjct: 6 THKLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPARLDILDTAGQE 65
Query: 111 NVRRFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVPILVIANKQD 167
Y + V D +L + P++++ NK D
Sbjct: 66 EFGAMREQYMRAGHGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVVLVGNKAD 122
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 38.4 bits (88), Expect = 2e-04
Identities = 14/94 (14%), Positives = 33/94 (35%), Gaps = 2/94 (2%)
Query: 54 KILILGLDNSGKSTLIKQISSG--NTSLSHNLKPTEGFNITILQKGEYTLNIFELGGQEN 111
K+ +LG GKS+++ + + +++ + + Q + I++ G E
Sbjct: 6 KVCLLGDTGVGKSSIMWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGLER 65
Query: 112 VRRFWNTYFEDTDLLVFVVDSADPSKLPVAAMEL 145
R Y+ + + V D +
Sbjct: 66 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWV 99
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 38.1 bits (87), Expect = 3e-04
Identities = 14/116 (12%), Positives = 38/116 (32%)
Query: 52 QRKILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKGEYTLNIFELGGQEN 111
Q K++++G +GK+T +K+ +G + + + +
Sbjct: 3 QFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQ 62
Query: 112 VRRFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVPILVIANKQD 167
+ ++ S++ + + + +PI++ NK D
Sbjct: 63 EKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVD 118
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 37.8 bits (86), Expect = 3e-04
Identities = 18/90 (20%), Positives = 34/90 (37%), Gaps = 10/90 (11%)
Query: 55 ILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKGEYTLNIFELGG------ 108
I I+G N GKSTL+ ++ S++ T I + I+
Sbjct: 8 IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEE 67
Query: 109 ----QENVRRFWNTYFEDTDLLVFVVDSAD 134
+ + ++ D +L++FVV+
Sbjct: 68 KRAINRLMNKAASSSIGDVELVIFVVEGTR 97
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 37.7 bits (86), Expect = 4e-04
Identities = 21/115 (18%), Positives = 45/115 (39%), Gaps = 2/115 (1%)
Query: 54 KILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKG-EYTLNIFELGGQENV 112
K +++G GK+ L+ ++ + + + +++ G +Y L +++ GQE+
Sbjct: 11 KCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDY 70
Query: 113 RRFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVPILVIANKQD 167
R + TD + + S E + VP L+I + D
Sbjct: 71 DRLRPLSYPMTD-VFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQID 124
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 36.6 bits (83), Expect = 8e-04
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 52 QRKILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKG-EYTLNIFELGGQE 110
RKI ILG + GKS+L Q G S++ F I G EY L + + GQ+
Sbjct: 4 SRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDTAGQD 63
Query: 111 NVRRFWNTYF 120
F TY
Sbjct: 64 EYSIFPQTYS 73
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 36.7 bits (84), Expect = 0.001
Identities = 22/137 (16%), Positives = 44/137 (32%), Gaps = 14/137 (10%)
Query: 46 KVDDIFQRKILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKGE------- 98
K +D+ IL++G GKS+ + I + + + +
Sbjct: 26 KQEDVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNII 85
Query: 99 YTLNIFELG-----GQENVRRFWNTYFEDTDLLVFVVDSADPSKLPVAAME-LKNLLGDQ 152
T + E G ++ F D L V +D+ L + + + G
Sbjct: 86 DTPGLIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKG 145
Query: 153 RLSTVPILVIANKQDVP 169
+ I+ + + Q P
Sbjct: 146 IWNKA-IVALTHAQFSP 161
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 34.3 bits (77), Expect = 0.006
Identities = 14/118 (11%), Positives = 36/118 (30%), Gaps = 4/118 (3%)
Query: 54 KILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKGEYTLNIFELGGQENVR 113
+++++G GKSTL + + S+ + + + L +
Sbjct: 5 RVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLDMWENK 64
Query: 114 RFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLL----GDQRLSTVPILVIANKQD 167
+ + + + L ++ +PI+++ NK D
Sbjct: 65 GENEWLHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGNKSD 122
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR,
ribosylnicotinamide kinase domain {Haemophilus
influenzae [TaxId: 727]}
Length = 192
Score = 33.5 bits (75), Expect = 0.010
Identities = 9/23 (39%), Positives = 17/23 (73%)
Query: 51 FQRKILILGLDNSGKSTLIKQIS 73
F + + ILG ++SGKS L+ +++
Sbjct: 6 FAKTVAILGGESSGKSVLVNKLA 28
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 33.4 bits (75), Expect = 0.010
Identities = 15/114 (13%), Positives = 41/114 (35%), Gaps = 2/114 (1%)
Query: 54 KILILGLDNSGKSTLIKQISSG--NTSLSHNLKPTEGFNITILQKGEYTLNIFELGGQEN 111
++ + G GKS+L+ + G S ++ T I+ + G +
Sbjct: 4 RVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTGSHQF 63
Query: 112 VRRFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVPILVIANK 165
+ + ++ ++ S + + + + ++PI+++ NK
Sbjct: 64 PAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNK 117
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase
TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 33.2 bits (74), Expect = 0.013
Identities = 8/29 (27%), Positives = 18/29 (62%)
Query: 54 KILILGLDNSGKSTLIKQISSGNTSLSHN 82
K++I G N+GKS+L+ ++ ++ +
Sbjct: 3 KVVIAGRPNAGKSSLLNALAGREAAIVTD 31
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle
domain {Thermus thermophilus [TaxId: 274]}
Length = 180
Score = 33.1 bits (74), Expect = 0.014
Identities = 8/37 (21%), Positives = 20/37 (54%)
Query: 55 ILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNI 91
+ ++G N+GKS+L+ ++ + ++ T N+
Sbjct: 4 VGLVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLSPNL 40
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 32.8 bits (73), Expect = 0.018
Identities = 8/26 (30%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Query: 50 IFQRKILILGLDNSGKSTLIKQISSG 75
++ K+L+LG GKS L +
Sbjct: 1 VY--KVLLLGAPGVGKSALARIFGGV 24
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 171
Score = 32.8 bits (73), Expect = 0.019
Identities = 11/80 (13%), Positives = 27/80 (33%)
Query: 55 ILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKGEYTLNIFELGGQENVRR 114
+LI+G N GKSTL ++ ++ + + + +
Sbjct: 3 VLIVGRPNVGKSTLFNKLVKKKKAIVEDEEGVTRDPVQDTVEWYGKTFKLVDTCGVFDNP 62
Query: 115 FWNTYFEDTDLLVFVVDSAD 134
+ ++ + ++ AD
Sbjct: 63 QDIISQKMKEVTLNMIREAD 82
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 32.0 bits (71), Expect = 0.028
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 55 ILILGLDNSGKSTLIKQISSGNTSLSHNLKPT 86
+ I+G N GKSTL+ + + T
Sbjct: 8 VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQT 39
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle
domain {Bacillus subtilis [TaxId: 1423]}
Length = 185
Score = 32.2 bits (72), Expect = 0.031
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 55 ILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNI 91
+ ++G + GKSTL+ +SS ++ T N+
Sbjct: 4 VGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNL 40
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 31.9 bits (71), Expect = 0.031
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 54 KILILGLDNSGKSTLIKQIS 73
KI+I G GK+TL+K+I
Sbjct: 2 KIIITGEPGVGKTTLVKKIV 21
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 31.9 bits (71), Expect = 0.033
Identities = 19/113 (16%), Positives = 39/113 (34%), Gaps = 1/113 (0%)
Query: 54 KILILGLDNSGKSTLIKQISSGNTSLSHNLKPTE-GFNITILQKGEYTLNIFELGGQENV 112
+++++G GKS L Q ++ + ++ L+I + GQE
Sbjct: 7 RLVVVGGGGVGKSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDDRAARLDILDTAGQEEF 66
Query: 113 RRFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVPILVIANK 165
Y + + V D + +L + P+++I NK
Sbjct: 67 GAMREQYMRTGEGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDEFPMILIGNK 119
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 31.5 bits (70), Expect = 0.042
Identities = 14/85 (16%), Positives = 24/85 (28%), Gaps = 4/85 (4%)
Query: 54 KILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKGEYTLNIFELGG--QEN 111
K+ I G GKS L+ + + PT + + E+ +
Sbjct: 4 KLAIFGRAGVGKSALVVRFLTK--RFIWEYDPTLESTYRHQATIDDEVVSMEILDTAGQE 61
Query: 112 VRRFWNTYFEDTDLLVFVVDSADPS 136
+ + V V D D
Sbjct: 62 DTIQREGHMRWGEGFVLVYDITDRG 86
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 31.6 bits (70), Expect = 0.051
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 54 KILILGLDNSGKSTLIKQISSGNTSLSHN 82
K+ I+G N GKSTL I + +L
Sbjct: 10 KVAIVGRPNVGKSTLFNAILNKERALVSP 38
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain
{Bacteriophage T4 [TaxId: 10665]}
Length = 152
Score = 30.1 bits (66), Expect = 0.12
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 52 QRKILILGLDNSGKSTLIKQISSGNTSLSH 81
++ IL +G SGKST ++ + N +
Sbjct: 2 KKIILTIGCPGSGKSTWAREFIAKNPGFYN 31
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 30.4 bits (67), Expect = 0.12
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 55 ILILGLDNSGKSTLIKQISSGNTSLSH 81
I+ G N GKSTLI +++
Sbjct: 3 IIFAGRSNVGKSTLIYRLTGKKVRRGK 29
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli
[TaxId: 562]}
Length = 188
Score = 30.1 bits (66), Expect = 0.14
Identities = 9/44 (20%), Positives = 17/44 (38%), Gaps = 12/44 (27%)
Query: 33 QSTPEDEGFEEVSKVDDIFQRKILILGLDNSGKSTLIKQISSGN 76
+ P D G E + G N+GKS+ + +++
Sbjct: 9 RHLPSDTGIE------------VAFAGRSNAGKSSALNTLTNQK 40
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 283
Score = 30.1 bits (66), Expect = 0.17
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 42 EEVSKVDDIFQRKILILGLDNSGKSTLIKQI 72
+E+ K+ + L+LGL +GKS++IK
Sbjct: 19 KEIEKLKGLRAPITLVLGLRRTGKSSIIKIG 49
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal
domain {Fission yeast (Schizosaccharomyces pombe)
[TaxId: 4896]}
Length = 296
Score = 30.2 bits (67), Expect = 0.18
Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 5/40 (12%)
Query: 54 KILILGLDNSGKSTLIKQISSGNTSLSHN-----LKPTEG 88
K I+G+ N GKST + I+ N + P E
Sbjct: 12 KTGIVGMPNVGKSTFFRAITKSVLGNPANYPYATIDPEEA 51
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus
voltae [TaxId: 2188]}
Length = 190
Score = 29.6 bits (65), Expect = 0.22
Identities = 3/21 (14%), Positives = 10/21 (47%)
Query: 53 RKILILGLDNSGKSTLIKQIS 73
+ +++ G+ G +T +
Sbjct: 2 KVVVVTGVPGVGSTTSSQLAM 22
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 319
Score = 29.9 bits (66), Expect = 0.23
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 54 KILILGLDNSGKSTLIKQISSGN 76
+I ++G N GKST + +
Sbjct: 2 EIGVVGKPNVGKSTFFSAATLVD 24
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 254
Score = 29.6 bits (66), Expect = 0.25
Identities = 18/85 (21%), Positives = 32/85 (37%), Gaps = 15/85 (17%)
Query: 40 GFEEVSKVD-DIFQRKIL-ILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKG 97
F+ + V + + + I+G + SGKSTLI ++ LK EG + +
Sbjct: 16 EFKALDGVSISVNKGDVTLIIGPNGSGKSTLIN-------VITGFLKADEG---RVYFEN 65
Query: 98 EYTLNIFELGGQENVRRFWNTYFED 122
+ +I E F+
Sbjct: 66 K---DITNKEPAELYHYGIVRTFQT 87
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus
acidocaldarius [TaxId: 2285]}
Length = 194
Score = 29.2 bits (64), Expect = 0.27
Identities = 13/75 (17%), Positives = 27/75 (36%), Gaps = 8/75 (10%)
Query: 55 ILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKGEYTLNIFELGGQENVRR 114
++ G+ GKST++ + + L +G N I+ G++ L G R
Sbjct: 4 GIVTGIPGVGKSTVLAK-------VKEILD-NQGINNKIINYGDFMLATALKLGYAKDRD 55
Query: 115 FWNTYFEDTDLLVFV 129
+ + +
Sbjct: 56 EMRKLSVEKQKKLQI 70
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 29.2 bits (64), Expect = 0.27
Identities = 15/114 (13%), Positives = 42/114 (36%), Gaps = 3/114 (2%)
Query: 54 KILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKGEYTLNIFELGGQENVR 113
++ +LG SGKS+LI + +G+ + TE + ++ + +
Sbjct: 7 RLGVLGDARSGKSSLIHRFLTGSYQVLE---KTESEQYKKEMLVDGQTHLVLIREEAGAP 63
Query: 114 RFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVPILVIANKQD 167
+ + D + VF ++ + + + L + + + ++ +
Sbjct: 64 DAKFSGWADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALVGTQDR 117
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 208
Score = 29.3 bits (64), Expect = 0.28
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 55 ILILGLDNSGKSTLIKQIS 73
I I G+D +GK TL++++S
Sbjct: 3 IAIEGVDGAGKRTLVEKLS 21
>d1jala1 c.37.1.8 (A:1-278) YchF GTP-binding protein N-terminal
domain {Haemophilus influenzae [TaxId: 727]}
Length = 278
Score = 29.1 bits (65), Expect = 0.32
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 54 KILILGLDNSGKSTLIKQISSGN 76
K I+GL N GKSTL ++
Sbjct: 4 KCGIVGLPNVGKSTLFNALTKAG 26
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 209
Score = 29.2 bits (64), Expect = 0.33
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 55 ILILGLDNSGKSTLIKQIS 73
I++ G+D +GKST +++
Sbjct: 6 IVLEGVDRAGKSTQSRKLV 24
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 241
Score = 29.2 bits (64), Expect = 0.35
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 53 RKILILGLDNSGKSTLIKQIS 73
+KI I G +GKST + +
Sbjct: 3 KKISIEGNIAAGKSTFVNILK 23
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli
[TaxId: 562]}
Length = 210
Score = 28.7 bits (63), Expect = 0.39
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 55 ILILGLDNSGKSTLIKQIS 73
I+I GL+ +GK+T +
Sbjct: 5 IVIEGLEGAGKTTARNVVV 23
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 214
Score = 28.7 bits (63), Expect = 0.40
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 55 ILILGLDNSGKSTLIKQIS 73
ILI GLD +GK+T +
Sbjct: 6 ILIEGLDRTGKTTQCNILY 24
>d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis
[TaxId: 1423]}
Length = 273
Score = 29.0 bits (64), Expect = 0.42
Identities = 9/47 (19%), Positives = 24/47 (51%), Gaps = 7/47 (14%)
Query: 121 EDTDLLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVPILVIANKQD 167
+ D++ +VD+ P + ++++L ++ P +++ NK D
Sbjct: 14 KLIDIVYELVDARIP--MSSRNPMIEDILKNK-----PRIMLLNKAD 53
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 29.0 bits (64), Expect = 0.46
Identities = 15/137 (10%), Positives = 38/137 (27%), Gaps = 14/137 (10%)
Query: 42 EEVSKVDDIFQR------KILILGLDNSGKSTLIKQI----SSGNTSLSHNLKPTEGFNI 91
S + D + + + G SGKS+ I + + + +
Sbjct: 40 LTNSAISDALKEIDSSVLNVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVTMERH 99
Query: 92 TILQKGEYTLNIFELGGQENVRRFWNTYFEDTDLLVFVVDSADPS-KLPVAAMELKNLLG 150
+ ++L G + +TY E + + + +++ +
Sbjct: 100 PYKHPNIPNVVFWDLPGIGSTNFPPDTYLEKMKFYEYDFFIIISATRFKKNDIDIAKAIS 159
Query: 151 DQRLSTVPILVIANKQD 167
+ + K D
Sbjct: 160 MMK---KEFYFVRTKVD 173
>d1bifa1 c.37.1.7 (A:37-249)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase,
kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 213
Score = 28.4 bits (62), Expect = 0.51
Identities = 6/19 (31%), Positives = 14/19 (73%)
Query: 55 ILILGLDNSGKSTLIKQIS 73
I+++GL GK+ + K+++
Sbjct: 5 IVMVGLPARGKTYISKKLT 23
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine
permease {Salmonella typhimurium [TaxId: 90371]}
Length = 258
Score = 28.7 bits (64), Expect = 0.52
Identities = 20/95 (21%), Positives = 38/95 (40%), Gaps = 15/95 (15%)
Query: 40 GFEEVSKVD-DIFQRKIL-ILGLDNSGKSTLIKQISSGNTSLSHNLKPTEG------FNI 91
G E + V ++ I+G SGKST ++ ++ KP+EG NI
Sbjct: 14 GHEVLKGVSLQARAGDVISIIGSSGSGKSTFLR-------CINFLEKPSEGAIIVNGQNI 66
Query: 92 TILQKGEYTLNIFELGGQENVRRFWNTYFEDTDLL 126
+++ + L + + +R F+ +L
Sbjct: 67 NLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLW 101
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 241
Score = 28.5 bits (62), Expect = 0.52
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 53 RKILILGLDNSGKSTLIKQIS 73
R++ I G GKST +K ++
Sbjct: 3 RRLSIEGNIAVGKSTFVKLLT 23
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis
[TaxId: 1423]}
Length = 195
Score = 28.2 bits (61), Expect = 0.57
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 54 KILILGLDNSGKSTLIKQI 72
+I + G N GKS+ I +
Sbjct: 25 EIALAGRSNVGKSSFINSL 43
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 197
Score = 28.4 bits (62), Expect = 0.57
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 55 ILILGLDNSGKSTLIKQIS 73
+LI G SGK+T +
Sbjct: 12 VLIEGNIGSGKTTYLNHFE 30
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli
[TaxId: 562]}
Length = 169
Score = 27.8 bits (60), Expect = 0.83
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 53 RKILILGLDNSGKSTLIKQIS 73
R I ++G +GKST+ +Q++
Sbjct: 3 RNIFLVGPMGAGKSTIGRQLA 23
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 180
Score = 27.6 bits (60), Expect = 0.97
Identities = 4/20 (20%), Positives = 11/20 (55%)
Query: 54 KILILGLDNSGKSTLIKQIS 73
+++++G +GK T +
Sbjct: 4 RMVLIGPPGAGKGTQAPNLQ 23
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus
halodurans [TaxId: 86665]}
Length = 176
Score = 27.3 bits (59), Expect = 1.1
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 52 QRKILILGLDNSGKSTLIKQIS 73
++ +I G GKST K+++
Sbjct: 2 KKLYIITGPAGVGKSTTCKRLA 23
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter
{Thermotoga maritima, TM1139 [TaxId: 2336]}
Length = 240
Score = 27.6 bits (61), Expect = 1.1
Identities = 23/179 (12%), Positives = 52/179 (29%), Gaps = 27/179 (15%)
Query: 40 GFEEVSKVD-DIFQRKIL-ILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKG 97
+ +D + + +I+ ++G + +GK+T + I+ L + I +
Sbjct: 18 AIHAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIA--------GLVRAQKGKIIFNGQD 69
Query: 98 EYTLNIFELGGQENVRRFWNT-YFEDTDLLVFVVDSADPSKLPVA-------AMELKNLL 149
+ F + + ++ A K L L
Sbjct: 70 ITNKPAHVINRMGIALVPEGRRIFPELTVYENLMMGAYNRKDKEGIKRDLEWIFSLFPRL 129
Query: 150 GDQRLSTVPILVIANKQDV---------PGALSAEEVGVALDLSSISSRQHRIKLIATQ 199
++ L +Q + P L +E + L +S I+ I +
Sbjct: 130 KERLKQLGGTLSGGEQQMLAIGRALMSRPKLLMMDEPSLGLAPILVSEVFEVIQKINQE 188
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 27.2 bits (59), Expect = 1.2
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 54 KILILGLDNSGKSTLIKQIS 73
+I++LG +GK T + I
Sbjct: 2 RIILLGAPVAGKGTQAQFIM 21
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Escherichia coli [TaxId:
562]}
Length = 170
Score = 26.9 bits (58), Expect = 1.5
Identities = 5/18 (27%), Positives = 11/18 (61%)
Query: 55 ILILGLDNSGKSTLIKQI 72
+ +GK+TL+K++
Sbjct: 5 LAFAAWSGTGKTTLLKKL 22
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 182
Score = 26.8 bits (58), Expect = 1.6
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 54 KILILGLDNSGKSTLIKQIS 73
++++GL +GK T ++I
Sbjct: 2 NLVLMGLPGAGKGTQAEKIV 21
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 189
Score = 26.9 bits (58), Expect = 1.7
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 53 RKILILGLDNSGKSTLIKQI 72
R + + G GK+TLI +
Sbjct: 2 RHVFLTGPPGVGKTTLIHKA 21
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus
furiosus [TaxId: 2261]}
Length = 200
Score = 26.8 bits (59), Expect = 1.7
Identities = 13/72 (18%), Positives = 27/72 (37%), Gaps = 4/72 (5%)
Query: 57 ILGLDNSGKSTLIKQIS----SGNTSLSHNLKPTEGFNITILQKGEYTLNIFELGGQENV 112
G + GK+TL+K IS + +N P I E + ++ ++ +
Sbjct: 32 FHGPNGIGKTTLLKTISTYLKPLKGEIIYNGVPITKVKGKIFFLPEEIIVPRKISVEDYL 91
Query: 113 RRFWNTYFEDTD 124
+ + Y +
Sbjct: 92 KAVASLYGVKVN 103
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 181
Score = 26.8 bits (58), Expect = 1.8
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 54 KILILGLDNSGKSTLIKQIS 73
++L+LG +GK T +++
Sbjct: 2 RVLLLGPPGAGKGTQAVKLA 21
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 213
Score = 26.8 bits (58), Expect = 1.8
Identities = 13/69 (18%), Positives = 25/69 (36%), Gaps = 3/69 (4%)
Query: 55 ILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKGEYTLNIFELGGQENVRR 114
I + G SGKS++ +I L N + IL + + + + ++
Sbjct: 5 IGVSGGTASGKSSVCAKIVQ---LLGQNEVDYRQKQVVILSQDSFYRVLTSEQKAKALKG 61
Query: 115 FWNTYFEDT 123
+N D
Sbjct: 62 QFNFDHPDA 70
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens),
isoenzyme 6 [TaxId: 9606]}
Length = 173
Score = 26.8 bits (58), Expect = 1.9
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 54 KILILGLDNSGKSTLIKQIS 73
IL+ G GK+TL K+++
Sbjct: 6 NILLTGTPGVGKTTLGKELA 25
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12
uptake, BtuD {Escherichia coli [TaxId: 562]}
Length = 231
Score = 26.8 bits (59), Expect = 1.9
Identities = 12/94 (12%), Positives = 31/94 (32%), Gaps = 9/94 (9%)
Query: 57 ILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKGEYTLNIFELGGQENVRRFW 116
++G + +GKSTL+ +++ + +G +I + + +L
Sbjct: 30 LVGPNGAGKSTLLARMA--------GMTSGKG-SIQFAGQPLEAWSATKLALHRAYLSQQ 80
Query: 117 NTYFEDTDLLVFVVDSADPSKLPVAAMELKNLLG 150
T T + ++ ++ L
Sbjct: 81 QTPPFATPVWHYLTLHQHDKTRTELLNDVAGALA 114
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
globisporus [TaxId: 1459]}
Length = 182
Score = 26.8 bits (58), Expect = 1.9
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 54 KILILGLDNSGKSTLIKQIS 73
I+++GL +GK T +I
Sbjct: 2 NIVLMGLPGAGKGTQADRIV 21
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 292
Score = 27.0 bits (58), Expect = 1.9
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 49 DIFQRKILILGLDNSGKSTLIKQISSG 75
+ + LI+G + SGKS+L+ I G
Sbjct: 20 EFKEGINLIIGQNGSGKSSLLDAILVG 46
>d1eeja1 c.47.1.9 (A:61-216) Disulfide bond isomerase, DsbC,
C-terminal domain {Escherichia coli [TaxId: 562]}
Length = 156
Score = 26.3 bits (57), Expect = 2.0
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 157 VPILVIANKQDVPGALSAEEVGVALD 182
P +V++N VPG +E+ LD
Sbjct: 122 TPAVVLSNGTLVPGYQPPKEMKEFLD 147
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3'
phosphatase, C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 172
Score = 26.4 bits (57), Expect = 2.2
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 55 ILILGLDNSGKSTLIKQI 72
++ +G +GKST I++
Sbjct: 17 VVAVGFPGAGKSTFIQEH 34
Score = 25.2 bits (54), Expect = 6.0
Identities = 6/35 (17%), Positives = 15/35 (42%)
Query: 21 TYATYQYWKKRRQSTPEDEGFEEVSKVDDIFQRKI 55
+ ++K+ + EGF E+ ++ Q +
Sbjct: 124 SDMVMFSYRKQFEPPTLAEGFLEILEIPFRLQEHL 158
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter
jejuni [TaxId: 197]}
Length = 161
Score = 26.4 bits (57), Expect = 2.2
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 53 RKILILGLDNSGKSTLIKQIS 73
+ I+ +G SGKSTL + ++
Sbjct: 1 KNIVFIGFMGSGKSTLARALA 21
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4
[TaxId: 10331]}
Length = 333
Score = 26.9 bits (59), Expect = 2.2
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 54 KILILGLDNSGKSTLIKQISS 74
+I + G+ GKST + ++S
Sbjct: 8 RIYLDGVYGIGKSTTGRVMAS 28
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export
ATP-binding/permease protein SAV1866 {Staphylococcus
aureus [TaxId: 1280]}
Length = 255
Score = 26.7 bits (59), Expect = 2.3
Identities = 17/70 (24%), Positives = 23/70 (32%), Gaps = 8/70 (11%)
Query: 54 KILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKGEYTLNIFELGGQENVR 113
+ +G+ GKSTLI + T G I I L Q +
Sbjct: 46 TVAFVGMSGGGKSTLIN-------LIPRFYDVTSG-QILIDGHNIKDFLTGSLRNQIGLV 97
Query: 114 RFWNTYFEDT 123
+ N F DT
Sbjct: 98 QQDNILFSDT 107
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea
mays) [TaxId: 4577]}
Length = 189
Score = 26.4 bits (57), Expect = 2.4
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 54 KILILGLDNSGKSTLIKQIS 73
K++I G SGK T + I
Sbjct: 5 KVMISGAPASGKGTQCELIK 24
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId:
562]}
Length = 171
Score = 26.1 bits (56), Expect = 2.5
Identities = 5/22 (22%), Positives = 13/22 (59%)
Query: 52 QRKILILGLDNSGKSTLIKQIS 73
+++G+ SGKS + +++
Sbjct: 6 HHIYVLMGVSGSGKSAVASEVA 27
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia
chrysanthemi [TaxId: 556]}
Length = 170
Score = 26.1 bits (56), Expect = 2.9
Identities = 4/21 (19%), Positives = 12/21 (57%)
Query: 53 RKILILGLDNSGKSTLIKQIS 73
I ++G G +T+ ++++
Sbjct: 3 EPIFMVGARGCGMTTVGRELA 23
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania
major [TaxId: 5664]}
Length = 174
Score = 25.7 bits (55), Expect = 3.3
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 54 KILILGLDNSGKSTLIKQIS 73
ILI G +GK+++ + I+
Sbjct: 7 NILITGTPGTGKTSMAEMIA 26
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 176
Score = 26.1 bits (56), Expect = 3.4
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 55 ILILGLDNSGKSTLIKQIS 73
+L+ G SGKST+ + ++
Sbjct: 7 LLLSGHPGSGKSTIAEALA 25
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus
[TaxId: 10335]}
Length = 331
Score = 26.1 bits (57), Expect = 3.6
Identities = 5/21 (23%), Positives = 10/21 (47%)
Query: 54 KILILGLDNSGKSTLIKQISS 74
+I + G GK+T ++
Sbjct: 7 RIYLDGAYGIGKTTAAEEFLH 27
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Length = 190
Score = 25.7 bits (55), Expect = 3.7
Identities = 5/21 (23%), Positives = 12/21 (57%)
Query: 54 KILILGLDNSGKSTLIKQISS 74
+ ++LG +GK T +++
Sbjct: 5 RAVLLGPPGAGKGTQAPKLAK 25
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase
{Streptomyces venezuelae [TaxId: 54571]}
Length = 178
Score = 25.8 bits (55), Expect = 3.7
Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Query: 52 QRKILILGLDNSGKSTLIKQISS--GNTSLSHNLKPTEGFNITILQKGEYTLNIFELGGQ 109
R I++ G ++GKS +++ + S L+ + +Q E + GG
Sbjct: 3 TRMIILNGGSSAGKSGIVRCLQSVLPEPWLAFGVDSLIEAMPLKMQSAEGGIEFDADGGV 62
Query: 110 ENVRRFWNTY 119
F
Sbjct: 63 SIGPEFRALE 72
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein
TrwB {Escherichia coli [TaxId: 562]}
Length = 433
Score = 26.0 bits (56), Expect = 3.8
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 49 DIFQRKILILGLDNSGKSTLIKQI 72
D R +L+ G +GKS L++++
Sbjct: 47 DAEPRHLLVNGATGTGKSVLLREL 70
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type
1, different strains [TaxId: 10298]}
Length = 329
Score = 26.1 bits (57), Expect = 3.8
Identities = 5/22 (22%), Positives = 11/22 (50%)
Query: 53 RKILILGLDNSGKSTLIKQISS 74
++ I G GK+T + + +
Sbjct: 5 LRVYIDGPHGMGKTTTTQLLVA 26
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 194
Score = 25.7 bits (55), Expect = 4.0
Identities = 6/20 (30%), Positives = 10/20 (50%)
Query: 54 KILILGLDNSGKSTLIKQIS 73
+ +LG +GK T +I
Sbjct: 3 VVFVLGGPGAGKGTQCARIV 22
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum
[TaxId: 44689]}
Length = 194
Score = 25.7 bits (55), Expect = 4.2
Identities = 7/21 (33%), Positives = 9/21 (42%)
Query: 53 RKILILGLDNSGKSTLIKQIS 73
+ +LG SGK T I
Sbjct: 7 NVVFVLGGPGSGKGTQCANIV 27
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544
{Thermotoga maritima [TaxId: 2336]}
Length = 238
Score = 25.7 bits (56), Expect = 4.4
Identities = 6/17 (35%), Positives = 13/17 (76%)
Query: 57 ILGLDNSGKSTLIKQIS 73
++G + +GK+T ++ IS
Sbjct: 33 LIGPNGAGKTTTLRIIS 49
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 165
Score = 25.3 bits (54), Expect = 4.6
Identities = 8/20 (40%), Positives = 16/20 (80%)
Query: 54 KILILGLDNSGKSTLIKQIS 73
K +++GL SGKST+ ++++
Sbjct: 3 KAVLVGLPGSGKSTIGRRLA 22
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase
(APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Length = 195
Score = 25.4 bits (54), Expect = 5.0
Identities = 5/19 (26%), Positives = 11/19 (57%)
Query: 55 ILILGLDNSGKSTLIKQIS 73
+ + GL +GK+T+ +
Sbjct: 22 VWLTGLSGAGKTTVSMALE 40
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955
{Pyrococcus abyssi [TaxId: 29292]}
Length = 244
Score = 25.7 bits (55), Expect = 5.1
Identities = 6/18 (33%), Positives = 11/18 (61%)
Query: 55 ILILGLDNSGKSTLIKQI 72
++ +G SGK+TL +
Sbjct: 3 VVFVGTAGSGKTTLTGEF 20
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain
{Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 183
Score = 25.4 bits (54), Expect = 5.1
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 55 ILILGLDNSGKSTLIKQIS 73
I + G NSGK + + +
Sbjct: 9 IFLTGYMNSGKDAIARALQ 27
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu),
N-terminal (G) domain {Cow (Bos taurus), mitochondrial
[TaxId: 9913]}
Length = 196
Score = 25.4 bits (55), Expect = 5.6
Identities = 22/131 (16%), Positives = 38/131 (29%), Gaps = 20/131 (15%)
Query: 55 ILILGLDNSGKSTLIKQI----------SSGNTSLSHNLKPTEGFNITILQK------GE 98
+ +G + GK+TL I N ITI
Sbjct: 6 VGTIGHVDHGKTTLTAAITKILAEGGGAKFKKYEEIDNAPEERARGITINAAHVEYSTAA 65
Query: 99 YTLNIFELGGQENVRRFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVP 158
+ G + + T D + VV + D ++LL +++
Sbjct: 66 RHYAHTDCPGHADYVKNMITGTAPLDGCILVVAAND----GPMPQTREHLLLARQIGVEH 121
Query: 159 ILVIANKQDVP 169
++V NK D
Sbjct: 122 VVVYVNKADAV 132
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId:
9823]}
Length = 194
Score = 25.3 bits (54), Expect = 5.8
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 53 RKILILGLDNSGKSTLIKQIS 73
+ I ++G SGK T ++I
Sbjct: 9 KIIFVVGGPGSGKGTQCEKIV 29
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Length = 189
Score = 25.2 bits (54), Expect = 5.9
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 54 KILILGLDNSGKSTLIKQIS 73
+ I+G SGK T+ +I+
Sbjct: 8 RAAIMGAPGSGKGTVSSRIT 27
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain
{Staphylococcus xylosus [TaxId: 1288]}
Length = 169
Score = 24.9 bits (54), Expect = 6.3
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 49 DIFQRKILILGLDNSGKSTL 68
D++ +LI G GKS
Sbjct: 12 DVYGVGVLITGDSGIGKSET 31
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA,
C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Length = 242
Score = 25.2 bits (55), Expect = 6.3
Identities = 14/56 (25%), Positives = 20/56 (35%), Gaps = 8/56 (14%)
Query: 54 KILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKGEYTLNIFELGGQ 109
I G GKST+ L +PT G ITI + +++ Q
Sbjct: 30 IIAFAGPSGGGKSTIFS-------LLERFYQPTAG-EITIDGQPIDNISLENWRSQ 77
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein
MetN {Escherichia coli [TaxId: 562]}
Length = 240
Score = 25.2 bits (55), Expect = 6.6
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 15/72 (20%)
Query: 57 ILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKGEYTLNIFELGGQEN--VRR 114
++G +GKSTLI+ + + +PTEG ++L G+ + L E RR
Sbjct: 36 VIGASGAGKSTLIRCV-------NLLERPTEG---SVLVDGQ---ELTTLSESELTKARR 82
Query: 115 FWNTYFEDTDLL 126
F+ +LL
Sbjct: 83 QIGMIFQHFNLL 94
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 232
Score = 24.9 bits (54), Expect = 7.0
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 57 ILGLDNSGKSTLIKQIS 73
+G GKSTL++ I+
Sbjct: 31 FVGPSGCGKSTLLRMIA 47
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein
{Escherichia coli [TaxId: 562]}
Length = 241
Score = 25.3 bits (55), Expect = 7.1
Identities = 11/19 (57%), Positives = 12/19 (63%)
Query: 54 KILILGLDNSGKSTLIKQI 72
I I+G SGKSTL K I
Sbjct: 31 VIGIVGRSGSGKSTLTKLI 49
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Bacillus stearothermophilus
[TaxId: 1422]}
Length = 165
Score = 24.8 bits (53), Expect = 7.2
Identities = 6/18 (33%), Positives = 13/18 (72%)
Query: 55 ILILGLDNSGKSTLIKQI 72
++G +SGK+TL+++
Sbjct: 4 WQVVGYKHSGKTTLMEKW 21
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022,
N-terminal domain {Pyrococcus horikoshii [TaxId:
53953]}
Length = 239
Score = 25.1 bits (55), Expect = 7.2
Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 9/51 (17%)
Query: 40 GFEEVSKVD-DIFQRKIL-ILGLDNSGKSTLIKQISSGNTSLSHNLKPTEG 88
F V+K++ I + L +LG GK+T ++ ++ +PTEG
Sbjct: 18 NFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLR-------MIAGLEEPTEG 61
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain
{Lactobacillus casei [TaxId: 1582]}
Length = 176
Score = 24.9 bits (54), Expect = 7.3
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 49 DIFQRKILILGLDNSGKSTL 68
DI+ +LI G GKS
Sbjct: 11 DIYGLGVLITGDSGVGKSET 30
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter,
ATP-binding protein {Methanosarcina acetivorans [TaxId:
2214]}
Length = 229
Score = 25.0 bits (54), Expect = 7.4
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 57 ILGLDNSGKSTLIKQIS 73
ILG +GK+ ++ I+
Sbjct: 31 ILGPTGAGKTLFLELIA 47
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 299
Score = 25.2 bits (54), Expect = 7.7
Identities = 8/40 (20%), Positives = 20/40 (50%), Gaps = 10/40 (25%)
Query: 44 VSKVDDIFQR----------KILILGLDNSGKSTLIKQIS 73
V+++ D F +I ++G ++GKS++++
Sbjct: 8 VNRLQDAFSAIGQNADLDLPQIAVVGGQSAGKSSVLENFV 47
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 190
Score = 24.9 bits (53), Expect = 7.9
Identities = 8/20 (40%), Positives = 15/20 (75%)
Query: 53 RKILILGLDNSGKSTLIKQI 72
R +++ G +GKSTL+K++
Sbjct: 1 RPVVLSGPSGAGKSTLLKKL 20
>d1t3ba1 c.47.1.9 (A:61-210) Disulfide bond isomerase, DsbC,
C-terminal domain {Haemophilus influenzae [TaxId: 727]}
Length = 150
Score = 24.8 bits (53), Expect = 8.3
Identities = 6/25 (24%), Positives = 13/25 (52%)
Query: 158 PILVIANKQDVPGALSAEEVGVALD 182
P +V + + + G L ++ AL+
Sbjct: 123 PSIVTSTGELIGGYLKPADLLRALE 147
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain
{Mycoplasma pneumoniae [TaxId: 2104]}
Length = 177
Score = 24.5 bits (53), Expect = 8.4
Identities = 6/20 (30%), Positives = 10/20 (50%)
Query: 49 DIFQRKILILGLDNSGKSTL 68
++F +L+ G GKS
Sbjct: 12 EVFGVGVLLTGRSGIGKSEC 31
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS
kinase) {Fungus (Penicillium chrysogenum) [TaxId:
5076]}
Length = 208
Score = 24.8 bits (53), Expect = 8.7
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 55 ILILGLDNSGKSTLIK 70
I + GL SGKSTL
Sbjct: 27 IWLTGLSASGKSTLAV 42
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV,
N-terminal domain {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 242
Score = 24.7 bits (53), Expect = 9.0
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 57 ILGLDNSGKSTLIKQIS 73
ILG +GK+T ++ I+
Sbjct: 36 ILGPSGAGKTTFMRIIA 52
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance
regulator, CFTR, nucleotide-binding domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 281
Score = 24.9 bits (54), Expect = 9.2
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 54 KILILGLDNSGKSTLIKQI 72
+ I G SGK++L+ I
Sbjct: 64 MLAITGSTGSGKTSLLMLI 82
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import
ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus
[TaxId: 2234]}
Length = 240
Score = 24.6 bits (53), Expect = 9.6
Identities = 8/32 (25%), Positives = 15/32 (46%), Gaps = 7/32 (21%)
Query: 57 ILGLDNSGKSTLIKQISSGNTSLSHNLKPTEG 88
+LG +GKS ++ ++ +KP G
Sbjct: 29 LLGPTGAGKSVFLE-------LIAGIVKPDRG 53
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis
elegans [TaxId: 6239]}
Length = 277
Score = 24.8 bits (53), Expect = 9.7
Identities = 27/177 (15%), Positives = 55/177 (31%), Gaps = 21/177 (11%)
Query: 42 EEVSKVDDIFQRKILILGLDNSGKSTLIKQISSGNTSLSHNLKPTEGFNITILQKGEYTL 101
+++ ++ D+ + + G SGKS + Q S L Y
Sbjct: 34 KKLDEMCDLDSFFLFLHGRAGSGKSVIASQALS---------------KSDQLIGINYDS 78
Query: 102 NIF-ELGGQENVRRFWNTYFEDTDLLVFVVDSADPSKLPVAAMELKNLLGDQRLSTVPIL 160
++ + G F L PS V ++ LK ++ + + L
Sbjct: 79 IVWLKDSGTAPKSTFDLFTDILLMLKSEDDLLNFPSVEHVTSVVLKRMICNALIDRPNTL 138
Query: 161 VIANKQDVPGALSAEEVGVALDLSSISSRQHRIKLIATQAPSNLHHLHVSVVEAEQA 217
+ + E + A +L R I+ A + V+ +E ++
Sbjct: 139 FV-----FDDVVQEETIRWAQELRLRCLVTTRDVEISNAASQTCEFIEVTSLEIDEC 190
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.131 0.361
Gapped
Lambda K H
0.267 0.0387 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 756,987
Number of extensions: 32583
Number of successful extensions: 307
Number of sequences better than 10.0: 1
Number of HSP's gapped: 288
Number of HSP's successfully gapped: 157
Length of query: 224
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 142
Effective length of database: 1,281,736
Effective search space: 182006512
Effective search space used: 182006512
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (24.3 bits)