BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12177
(163 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9BW72|HIG2A_HUMAN HIG1 domain family member 2A, mitochondrial OS=Homo sapiens
GN=HIGD2A PE=1 SV=1
Length = 106
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 54/72 (75%)
Query: 92 ETGTEKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVAQGFTVLA 151
E+ EK +RK +ENP+VPIGC+AT+AAL GLYS G+ + SQ+MMRTR+ AQGFTV A
Sbjct: 33 ESFKEKFVRKTRENPVVPIGCLATAAALTYGLYSFHRGNSQRSQLMMRTRIAAQGFTVAA 92
Query: 152 LTGGLIYTAYQT 163
+ GL TA ++
Sbjct: 93 ILLGLAVTAMKS 104
>sp|Q2GMG9|RCF1_CHAGB Respiratory supercomplex factor 1, mitochondrial OS=Chaetomium
globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 /
NBRC 6347 / NRRL 1970) GN=RCF1 PE=3 SV=1
Length = 223
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 50/80 (62%)
Query: 81 LQVGGYEQFTQETGTEKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRT 140
L G F E+G++K+IRK KE PLVPIGC+ T AA +M+ GD Q M R
Sbjct: 9 LTWGPRRDFYNESGSQKIIRKLKEEPLVPIGCILTIAAFTNAYRAMRRGDHHKVQRMFRA 68
Query: 141 RVVAQGFTVLALTGGLIYTA 160
RV AQGFTVLA+ GG +Y A
Sbjct: 69 RVAAQGFTVLAMVGGGMYYA 88
>sp|Q9CQJ1|HIG2A_MOUSE HIG1 domain family member 2A OS=Mus musculus GN=Higd2a PE=2 SV=1
Length = 106
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 49/68 (72%)
Query: 96 EKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVAQGFTVLALTGG 155
EK IRK +ENP+VPIGC+ T+AAL GLY G SQ+MMRTR+ AQGFTV+A+ G
Sbjct: 37 EKFIRKTRENPMVPIGCLGTAAALTYGLYCFHRGQSHRSQLMMRTRIAAQGFTVVAILLG 96
Query: 156 LIYTAYQT 163
L +A ++
Sbjct: 97 LAASAMKS 104
>sp|B6H465|RCF1_PENCW Respiratory supercomplex factor 1, mitochondrial OS=Penicillium
chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin
54-1255) GN=rcf1 PE=3 SV=1
Length = 179
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 45/74 (60%)
Query: 85 GYEQFTQETGTEKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVA 144
G QFT+ETG +K R+ KE PLVP+GC AT AL SMK GD M R R+ A
Sbjct: 13 GNPQFTEETGMQKFTRRLKEEPLVPLGCAATCYALYRAYRSMKSGDSVEMNRMFRARIYA 72
Query: 145 QGFTVLALTGGLIY 158
Q FT++AL G +Y
Sbjct: 73 QAFTLVALVAGGMY 86
>sp|A4RI25|RCF1_MAGO7 Respiratory supercomplex factor 1, mitochondrial OS=Magnaporthe
oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958)
GN=RCF1 PE=3 SV=1
Length = 213
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 43/72 (59%)
Query: 87 EQFTQETGTEKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVAQG 146
E F E G +K+ RK K+ PLVP+GCV T AA +M+ GD M R R+ AQG
Sbjct: 24 EDFYNENGFQKIARKLKQEPLVPLGCVLTVAAFTGAYRAMRAGDHGRVNRMFRYRIAAQG 83
Query: 147 FTVLALTGGLIY 158
FT+LA+ G IY
Sbjct: 84 FTILAMVAGGIY 95
>sp|A1CHC5|RCF1_ASPCL Respiratory supercomplex factor 1, mitochondrial OS=Aspergillus
clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC
3887 / NRRL 1) GN=rcf1 PE=3 SV=1
Length = 178
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 44/71 (61%)
Query: 88 QFTQETGTEKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVAQGF 147
QF +ET +K R+FKE PL+P+GC ATS AL SMK GD M R R+ AQ F
Sbjct: 15 QFKEETSLQKFRRRFKEEPLIPLGCAATSYALYRAYRSMKAGDSVEMNKMFRARIYAQFF 74
Query: 148 TVLALTGGLIY 158
T++A+ G +Y
Sbjct: 75 TLIAVVAGGMY 85
>sp|Q7S455|RCF1_NEUCR Respiratory supercomplex factor 1, mitochondrial OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=rcf-1 PE=3 SV=2
Length = 221
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 43/72 (59%)
Query: 89 FTQETGTEKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVAQGFT 148
F E G +K+ R+ +E PL+PIGC+AT AA +M+ GD Q M R RV AQ FT
Sbjct: 30 FYNENGFQKVSRRLREEPLIPIGCIATVAAFTGAYRAMRRGDHEQVQRMFRARVAAQAFT 89
Query: 149 VLALTGGLIYTA 160
V+A+ G Y A
Sbjct: 90 VVAMVAGSWYYA 101
>sp|A6SSX6|RCF1_BOTFB Respiratory supercomplex factor 1, mitochondrial OS=Botryotinia
fuckeliana (strain B05.10) GN=rcf1 PE=3 SV=1
Length = 175
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 46/74 (62%)
Query: 85 GYEQFTQETGTEKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVA 144
G F +E +KL R+ KE PL+P+GC+ TS AL S++ GD +Q M R R+ A
Sbjct: 13 GDTDFYEENRWQKLTRRLKEEPLIPLGCILTSLALVGASRSIRAGDHNRTQRMFRARIYA 72
Query: 145 QGFTVLALTGGLIY 158
QGFT+LA+ G +Y
Sbjct: 73 QGFTLLAMVAGSMY 86
>sp|Q875C2|RCF1_PODAN Respiratory supercomplex factor 1, mitochondrial OS=Podospora
anserina (strain S / ATCC MYA-4624 / DSM 980 / FGSC
10383) GN=RCF1 PE=3 SV=1
Length = 218
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 87 EQFTQETGTEKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVAQG 146
+ F E G +K++R+ KE PLVPIGC+ T AA +M+ GD Q M R RV AQ
Sbjct: 19 DDFYNENGFQKVLRRLKEEPLVPIGCLLTVAAFTNAYRAMRRGDHAKVQKMFRARVAAQA 78
Query: 147 FTVLAL-TGGLIYTA 160
FTV+A+ GG+ Y A
Sbjct: 79 FTVVAMVAGGMYYQA 93
>sp|Q0CLP4|RCF1_ASPTN Respiratory supercomplex factor 1, mitochondrial OS=Aspergillus
terreus (strain NIH 2624 / FGSC A1156) GN=rcf1 PE=3 SV=1
Length = 180
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 43/71 (60%)
Query: 88 QFTQETGTEKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVAQGF 147
QF +ETG +K R+ KE PL+P+GC AT AL SMK GD M R R+ AQ F
Sbjct: 14 QFEEETGLQKFRRRLKEEPLIPLGCAATCYALYRAYRSMKAGDSVEMNRMFRARIYAQAF 73
Query: 148 TVLALTGGLIY 158
T++A+ G +Y
Sbjct: 74 TLVAVVAGGMY 84
>sp|A2QI79|RCF1_ASPNC Respiratory supercomplex factor 1, mitochondrial OS=Aspergillus
niger (strain CBS 513.88 / FGSC A1513) GN=rcf1 PE=3 SV=1
Length = 177
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 43/71 (60%)
Query: 88 QFTQETGTEKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVAQGF 147
QF +ET +K R+ KE PL+P+GC ATS AL SMK GD M R R+ AQ F
Sbjct: 14 QFQEETSLQKFRRRLKEEPLIPLGCAATSYALYRAYRSMKAGDSVEMNKMFRARIYAQFF 73
Query: 148 TVLALTGGLIY 158
T++A+ G +Y
Sbjct: 74 TLIAVVAGGMY 84
>sp|Q4VC39|HIG2B_HUMAN Putative HIG1 domain family member 2B OS=Homo sapiens GN=HIGD2B
PE=5 SV=1
Length = 106
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 47/68 (69%)
Query: 96 EKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVAQGFTVLALTGG 155
EK +RK +ENP+VPIG + T+A L GLY G+ + S++MM T++ AQGFT+ A+ G
Sbjct: 37 EKFLRKTRENPVVPIGFLCTAAVLTNGLYCFHQGNSQCSRLMMHTQIAAQGFTIAAILLG 96
Query: 156 LIYTAYQT 163
L TA ++
Sbjct: 97 LAATAMKS 104
>sp|Q2UGQ3|RCF1_ASPOR Respiratory supercomplex factor 1, mitochondrial OS=Aspergillus
oryzae (strain ATCC 42149 / RIB 40) GN=rcf1 PE=3 SV=1
Length = 176
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%)
Query: 85 GYEQFTQETGTEKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVA 144
G QF +ET +K R+ KE PL+P+GC ATS AL SMK GD M R R+ A
Sbjct: 12 GNPQFEEETSLQKFRRRLKEEPLIPLGCAATSYALYRAYRSMKAGDSVEMNRMFRARIYA 71
Query: 145 QGFTVLALTGGLIY 158
Q FT++A+ G +Y
Sbjct: 72 QFFTLIAVVVGGMY 85
>sp|B8N9M0|RCF1_ASPFN Respiratory supercomplex factor 1, mitochondrial OS=Aspergillus
flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 /
JCM 12722 / SRRC 167) GN=rcf1 PE=3 SV=1
Length = 176
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%)
Query: 85 GYEQFTQETGTEKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVA 144
G QF +ET +K R+ KE PL+P+GC ATS AL SMK GD M R R+ A
Sbjct: 12 GNPQFEEETSLQKFRRRLKEEPLIPLGCAATSYALYRAYRSMKAGDSVEMNRMFRARIYA 71
Query: 145 QGFTVLALTGGLIY 158
Q FT++A+ G +Y
Sbjct: 72 QFFTLIAVVVGGMY 85
>sp|Q5B6J9|RCF1_EMENI Respiratory supercomplex factor 1, mitochondrial OS=Emericella
nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 /
NRRL 194 / M139) GN=rcf1 PE=3 SV=1
Length = 181
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
Query: 85 GYEQFTQETGTEKLIRKFKENPLVP----IGCVATSAALGVGLYSMKLGDRRLSQMMMRT 140
G+EQF +ET +K R+FKE P VP +GC AT AL SMK GD M R
Sbjct: 11 GHEQFQEETPLQKFGRRFKEEPWVPAVGLLGCAATCYALWRAYRSMKAGDSVEMNRMFRA 70
Query: 141 RVVAQGFTVL-ALTGGLIYTAYQT 163
R+ AQG T+L + GGL Y +T
Sbjct: 71 RIYAQGLTLLTVVAGGLYYRTERT 94
>sp|Q4WP59|RCF1_ASPFU Respiratory supercomplex factor 1, mitochondrial OS=Neosartorya
fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 /
FGSC A1100) GN=rcf1 PE=3 SV=1
Length = 181
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 42/71 (59%)
Query: 88 QFTQETGTEKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVAQGF 147
QF +ET +K R+ KE PL+P+GC AT AL SMK GD M R R+ AQ F
Sbjct: 15 QFKEETSLQKFRRRLKEEPLIPLGCAATCYALYRAYRSMKAGDSVEMNKMFRARIYAQFF 74
Query: 148 TVLALTGGLIY 158
T++A+ G +Y
Sbjct: 75 TLVAVVAGGMY 85
>sp|B0Y606|RCF1_ASPFC Respiratory supercomplex factor 1, mitochondrial OS=Neosartorya
fumigata (strain CEA10 / CBS 144.89 / FGSC A1163)
GN=rcf1 PE=3 SV=1
Length = 181
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 42/71 (59%)
Query: 88 QFTQETGTEKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVAQGF 147
QF +ET +K R+ KE PL+P+GC AT AL SMK GD M R R+ AQ F
Sbjct: 15 QFKEETSLQKFRRRLKEEPLIPLGCAATCYALYRAYRSMKAGDSVEMNKMFRARIYAQFF 74
Query: 148 TVLALTGGLIY 158
T++A+ G +Y
Sbjct: 75 TLVAVVAGGMY 85
>sp|A1CXG2|RCF1_NEOFI Respiratory supercomplex factor 1, mitochondrial OS=Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 /
NRRL 181) GN=rcf1 PE=3 SV=1
Length = 181
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 42/71 (59%)
Query: 88 QFTQETGTEKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVAQGF 147
QF +ET +K R+ KE PL+P+GC AT AL SMK GD M R R+ AQ F
Sbjct: 15 QFKEETSLQKFRRRLKEEPLIPLGCAATCYALYRAYRSMKAGDSVEMNKMFRARIYAQFF 74
Query: 148 TVLALTGGLIY 158
T++A+ G +Y
Sbjct: 75 TLVAVVAGGMY 85
>sp|C6H220|RCF1_AJECH Respiratory supercomplex factor 1, mitochondrial OS=Ajellomyces
capsulata (strain H143) GN=RCF1 PE=3 SV=1
Length = 145
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 39/71 (54%)
Query: 88 QFTQETGTEKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVAQGF 147
+F QET +K R+ KE PL+PIG ATS AL SMK GD M R R+ F
Sbjct: 15 EFFQETKWQKFTRRIKEEPLIPIGYAATSYALWRAYKSMKAGDSVELNRMFRARIYGHAF 74
Query: 148 TVLALTGGLIY 158
T+ A+ G IY
Sbjct: 75 TLFAIVAGGIY 85
>sp|C0RYW2|RCF1_PARBP Respiratory supercomplex factor 1, mitochondrial
OS=Paracoccidioides brasiliensis (strain Pb03) GN=RCF1
PE=3 SV=1
Length = 144
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 39/71 (54%)
Query: 88 QFTQETGTEKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVAQGF 147
+F QET +K R+ KE PL+PIG ATS AL SMK GD M R R+ F
Sbjct: 15 EFFQETKWQKFTRRIKEEPLIPIGYAATSYALWRAYKSMKAGDSIELNRMFRARIYGHAF 74
Query: 148 TVLALTGGLIY 158
T+ A+ G IY
Sbjct: 75 TLFAIVAGGIY 85
>sp|C1G794|RCF1_PARBD Respiratory supercomplex factor 1, mitochondrial
OS=Paracoccidioides brasiliensis (strain Pb18) GN=RCF1
PE=3 SV=1
Length = 144
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 39/71 (54%)
Query: 88 QFTQETGTEKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVAQGF 147
+F QET +K R+ KE PL+PIG ATS AL SMK GD M R R+ F
Sbjct: 15 EFFQETKWQKFTRRIKEEPLIPIGYAATSYALWRAYKSMKAGDSIELNRMFRARIYGHAF 74
Query: 148 TVLALTGGLIY 158
T+ A+ G IY
Sbjct: 75 TLFAIVAGGIY 85
>sp|C0NUL6|RCF1_AJECG Respiratory supercomplex factor 1, mitochondrial OS=Ajellomyces
capsulata (strain G186AR / H82 / ATCC MYA-2454 / RMSCC
2432) GN=RCF1 PE=3 SV=1
Length = 145
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 39/71 (54%)
Query: 88 QFTQETGTEKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVAQGF 147
+F QET +K R+ KE PL+PIG ATS AL SMK GD M R R+ F
Sbjct: 15 EFFQETKWQKFTRRIKEEPLIPIGYAATSYALWRAYKSMKAGDSIELNRMFRARIYGHAF 74
Query: 148 TVLALTGGLIY 158
T+ A+ G IY
Sbjct: 75 TLFAIVAGGIY 85
>sp|A6RBB3|RCF1_AJECN Respiratory supercomplex factor 1, mitochondrial OS=Ajellomyces
capsulata (strain NAm1 / WU24) GN=RCF1 PE=3 SV=1
Length = 145
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 39/71 (54%)
Query: 88 QFTQETGTEKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVAQGF 147
+F QET +K R+ KE PL+PIG ATS AL SMK GD M R R+ F
Sbjct: 15 EFFQETKWQKFTRRIKEEPLIPIGYAATSYALWRAYKSMKAGDSIELNRMFRARIYGHAF 74
Query: 148 TVLALTGGLIY 158
T+ A+ G IY
Sbjct: 75 TLFAIVAGGIY 85
>sp|B0D4J7|RCF1_LACBS Respiratory supercomplex factor 1, mitochondrial OS=Laccaria
bicolor (strain S238N-H82 / ATCC MYA-4686) GN=RCF1 PE=3
SV=1
Length = 187
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 85 GYEQFTQETGTEKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVA 144
GYE +T EK RKFKENP VPIGCVAT AL + M+ G +R RVV
Sbjct: 21 GYEGWT-----EKFSRKFKENPWVPIGCVATCGALIMSAVKMRAGKSTDMNYWLRARVVI 75
Query: 145 QGFTVLALTGG 155
QG T+ AL G
Sbjct: 76 QGVTIAALVAG 86
>sp|C5P447|RCF1_COCP7 Respiratory supercomplex factor 1, mitochondrial OS=Coccidioides
posadasii (strain C735) GN=RCF1 PE=3 SV=1
Length = 180
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 42/71 (59%)
Query: 88 QFTQETGTEKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVAQGF 147
+F +E KL R+ +E PL+P+GC ATS AL SMK GD M R R+ AQ F
Sbjct: 15 EFFEENPWVKLRRRLREEPLIPLGCAATSYALWRAYKSMKAGDSDQLNRMFRYRIYAQAF 74
Query: 148 TVLALTGGLIY 158
T++A+ G IY
Sbjct: 75 TLVAVVVGGIY 85
>sp|B2WBP3|RCF1_PYRTR Respiratory supercomplex factor 1, mitochondrial OS=Pyrenophora
tritici-repentis (strain Pt-1C-BFP) GN=rcf1 PE=3 SV=1
Length = 167
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%)
Query: 88 QFTQETGTEKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVAQGF 147
F E +K+ R+F+E PLVP+GC T A+ SM+ GD +++ + R R+ AQGF
Sbjct: 20 DFYNENTIDKIWRRFREEPLVPLGCGLTVWAIVGATRSMRKGDHKMTNLYFRRRLYAQGF 79
Query: 148 TVLALTGGLIY 158
T+ L G +Y
Sbjct: 80 TIAVLVAGNMY 90
>sp|C5JIT3|RCF1_AJEDS Respiratory supercomplex factor 1, mitochondrial OS=Ajellomyces
dermatitidis (strain SLH14081) GN=RCF1 PE=3 SV=1
Length = 148
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 40/74 (54%)
Query: 85 GYEQFTQETGTEKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVA 144
+ +F QET +K+ R+ KE PL+PIG ATS AL SMK D M R R+
Sbjct: 15 AHPEFFQETKWQKVTRRLKEEPLIPIGYAATSYALWRAYKSMKARDSVELNRMFRARIYG 74
Query: 145 QGFTVLALTGGLIY 158
FT+ A+ G IY
Sbjct: 75 HAFTLFAIVAGGIY 88
>sp|C5GDJ2|RCF1_AJEDR Respiratory supercomplex factor 1, mitochondrial OS=Ajellomyces
dermatitidis (strain ER-3 / ATCC MYA-2586) GN=RCF1 PE=3
SV=1
Length = 148
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 40/74 (54%)
Query: 85 GYEQFTQETGTEKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVA 144
+ +F QET +K+ R+ KE PL+PIG ATS AL SMK D M R R+
Sbjct: 15 AHPEFFQETKWQKVTRRLKEEPLIPIGYAATSYALWRAYKSMKARDSVELNRMFRARIYG 74
Query: 145 QGFTVLALTGGLIY 158
FT+ A+ G IY
Sbjct: 75 HAFTLFAIVAGGIY 88
>sp|C5FSQ7|RCF1_ARTOC Respiratory supercomplex factor 1, mitochondrial OS=Arthroderma
otae (strain ATCC MYA-4605 / CBS 113480) GN=RCF1 PE=3
SV=1
Length = 187
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 41/70 (58%)
Query: 89 FTQETGTEKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVAQGFT 148
F Q+ +KL R+ KE PLVP+G AT AL SMK+GD M R R+ AQ FT
Sbjct: 16 FFQDNPWKKLGRRLKEEPLVPLGIGATCYALFRAYRSMKMGDSVQVNRMFRARIYAQAFT 75
Query: 149 VLALTGGLIY 158
+LA+ G +Y
Sbjct: 76 LLAVCAGSVY 85
>sp|A8P006|RCF1_COPC7 Respiratory supercomplex factor 1, mitochondrial OS=Coprinopsis
cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC
9003) GN=RCF1 PE=3 SV=1
Length = 177
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 38/64 (59%)
Query: 92 ETGTEKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVAQGFTVLA 151
ET EK RKFKENP VP+GC+AT AL + M+ G + MR RV QG T++A
Sbjct: 16 ETWGEKFQRKFKENPWVPLGCLATCGALLMSAVKMRQGRSKEMNYWMRARVGLQGLTLVA 75
Query: 152 LTGG 155
L G
Sbjct: 76 LVAG 79
>sp|D4DDK2|RCF1_TRIVH Respiratory supercomplex factor 1, mitochondrial OS=Trichophyton
verrucosum (strain HKI 0517) GN=RCF1 PE=3 SV=1
Length = 189
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 40/68 (58%)
Query: 91 QETGTEKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVAQGFTVL 150
Q+ +KL R+ KE PLVP+G AT AL SMK+GD M R R+ AQ FT+L
Sbjct: 18 QDNAWKKLGRRLKEEPLVPLGIGATCYALFRAYRSMKMGDSVQVNRMFRARIYAQAFTLL 77
Query: 151 ALTGGLIY 158
A+ G +Y
Sbjct: 78 AVCAGSVY 85
>sp|B8MJJ2|RCF1_TALSN Respiratory supercomplex factor 1, mitochondrial OS=Talaromyces
stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 /
NRRL 1006) GN=rcf1 PE=3 SV=1
Length = 188
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 40/71 (56%)
Query: 88 QFTQETGTEKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVAQGF 147
QF +ET +K R+ KE PL+P+GC AT AL S K D M R R+ AQ F
Sbjct: 12 QFEEETSMQKFKRRLKEEPLIPLGCAATCYALYRAYRSGKAKDSVEMNRMFRARIYAQFF 71
Query: 148 TVLALTGGLIY 158
T+LA+ G +Y
Sbjct: 72 TLLAVVAGGMY 82
>sp|C7YJ02|RCF1_NECH7 Respiratory supercomplex factor 1, mitochondrial OS=Nectria
haematococca (strain 77-13-4 / ATCC MYA-4622 / FGSC 9596
/ MPVI) GN=RCF1 PE=3 SV=1
Length = 230
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%)
Query: 87 EQFTQETGTEKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVAQG 146
+ F E +K+ RK KE PL+P+G TS A +++ GD + + M R RV AQG
Sbjct: 20 QDFYNERPMQKVFRKIKEEPLIPLGIGLTSLAFVNAYRALRRGDSKQANRMFRARVAAQG 79
Query: 147 FTVLALTGGLIY 158
FTV+A+ G +Y
Sbjct: 80 FTVIAMLAGSMY 91
>sp|Q6CBQ8|RCF1_YARLI Respiratory supercomplex factor 1, mitochondrial OS=Yarrowia
lipolytica (strain CLIB 122 / E 150) GN=RCF1 PE=3 SV=2
Length = 140
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%)
Query: 94 GTEKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVAQGFTVLALT 153
G K++ + KE PLVP+GC+AT AL + ++++G++R + M RV QG TV AL
Sbjct: 22 GYYKILERCKEQPLVPLGCLATCGALILSARALRVGNKRQANRMFFARVAFQGLTVAALI 81
Query: 154 GGLIY 158
GG +Y
Sbjct: 82 GGAMY 86
>sp|B6QHL8|RCF1B_PENMQ Respiratory supercomplex factor 1-B, mitochondrial OS=Penicillium
marneffei (strain ATCC 18224 / CBS 334.59 / QM 7333)
GN=rcf1-B PE=3 SV=1
Length = 175
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 39/70 (55%)
Query: 89 FTQETGTEKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVAQGFT 148
F +ET +K R+ KE PL+P+GC AT AL S K D M R R+ AQ FT
Sbjct: 13 FEEETSIQKFKRRLKEEPLIPLGCAATCYALYRAYRSGKAKDSVEMNRMFRARIYAQFFT 72
Query: 149 VLALTGGLIY 158
+LA+ G +Y
Sbjct: 73 LLAVVAGGMY 82
>sp|B6QHL9|RCF1A_PENMQ Respiratory supercomplex factor 1-A, mitochondrial OS=Penicillium
marneffei (strain ATCC 18224 / CBS 334.59 / QM 7333)
GN=rcf1-A PE=3 SV=1
Length = 167
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 39/70 (55%)
Query: 89 FTQETGTEKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVAQGFT 148
F +ET +K R+ KE PL+P+GC AT AL S K D M R R+ AQ FT
Sbjct: 5 FEEETSIQKFKRRLKEEPLIPLGCAATCYALYRAYRSGKAKDSVEMNRMFRARIYAQFFT 64
Query: 149 VLALTGGLIY 158
+LA+ G +Y
Sbjct: 65 LLAVVAGGMY 74
>sp|Q0V4P1|RCF1_PHANO Respiratory supercomplex factor 1, mitochondrial OS=Phaeosphaeria
nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173)
GN=RCF1 PE=3 SV=1
Length = 168
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%)
Query: 88 QFTQETGTEKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVAQGF 147
F E +K+ R+F+E PL+P GC T+ A+ SM+ GD +++ + R R+ AQ F
Sbjct: 21 DFYNENTIDKIWRRFREEPLIPFGCGLTAWAIVGASRSMRKGDHKMTNLYFRRRLYAQSF 80
Query: 148 TVLALTGGLIY 158
T+ L G +Y
Sbjct: 81 TIAVLVIGNLY 91
>sp|Q9JLR9|HIG1A_MOUSE HIG1 domain family member 1A, mitochondrial OS=Mus musculus
GN=Higd1a PE=2 SV=1
Length = 95
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 96 EKLIRKFKENPLVPIGCVATSAALGVGLYSMK-LGDRRLSQMMMRTRVVAQGFTVLALTG 154
K IRK KE P VPIG +A + GLY +K G+ ++S ++ RV AQGF V A+T
Sbjct: 18 SKFIRKAKETPFVPIGMAGFAAIVAYGLYKLKSRGNTKMSIHLIHMRVAAQGFVVGAMTL 77
Query: 155 GLIYTAYQ 162
G+ Y+ YQ
Sbjct: 78 GMGYSMYQ 85
>sp|C9SF29|RCF1_VERA1 Respiratory supercomplex factor 1, mitochondrial OS=Verticillium
albo-atrum (strain VaMs.102 / ATCC MYA-4576 / FGSC
10136) GN=RCF1 PE=3 SV=1
Length = 220
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%)
Query: 88 QFTQETGTEKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVAQGF 147
+F E K+ RK +E PL+P+G T A M+ GD+ + M R RV AQGF
Sbjct: 22 EFYNEKPMAKIFRKLREEPLIPLGAGLTVFAFTQAWRPMRRGDQVSANKMFRARVAAQGF 81
Query: 148 TVLALTGGLIY 158
TVLA+ G +Y
Sbjct: 82 TVLAMIAGSMY 92
>sp|Q5NVQ1|HIG1A_PONAB HIG1 domain family member 1A, mitochondrial OS=Pongo abelii
GN=HIGD1A PE=3 SV=1
Length = 93
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 91 QETGTEKLIRKFKENPLVPIGCVATSAALGVGLYSMK-LGDRRLSQMMMRTRVVAQGFTV 149
+E KLIRK KE P VP+G +A + GLY +K G+ ++S ++ RV AQGF V
Sbjct: 13 EEDQGSKLIRKAKEAPFVPVGIAGFAAIVAYGLYKLKSRGNTKMSIHLIHMRVAAQGFVV 72
Query: 150 LALTGGLIYTAYQ 162
A+T G+ Y+ Y+
Sbjct: 73 GAMTVGMGYSMYR 85
>sp|Q9Y241|HIG1A_HUMAN HIG1 domain family member 1A, mitochondrial OS=Homo sapiens
GN=HIGD1A PE=1 SV=1
Length = 93
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 91 QETGTEKLIRKFKENPLVPIGCVATSAALGVGLYSMK-LGDRRLSQMMMRTRVVAQGFTV 149
+E KLIRK KE P VP+G +A + GLY +K G+ ++S ++ RV AQGF V
Sbjct: 13 EEDQGSKLIRKAKEAPFVPVGIAGFAAIVAYGLYKLKSRGNTKMSIHLIHMRVAAQGFVV 72
Query: 150 LALTGGLIYTAYQ 162
A+T G+ Y+ Y+
Sbjct: 73 GAMTVGMGYSMYR 85
>sp|Q8VH49|HIG1A_RAT HIG1 domain family member 1A, mitochondrial OS=Rattus norvegicus
GN=Higd1a PE=2 SV=2
Length = 93
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 96 EKLIRKFKENPLVPIGCVATSAALGVGLYSMK-LGDRRLSQMMMRTRVVAQGFTVLALTG 154
K IRK +E P VPIG +A + GLY +K G+ ++S ++ RV AQGF V A+T
Sbjct: 18 SKFIRKARETPFVPIGMAGFAAIVAYGLYKLKSRGNTKMSIHLIHMRVAAQGFVVGAMTL 77
Query: 155 GLIYTAYQ 162
G+ Y+ YQ
Sbjct: 78 GMGYSMYQ 85
>sp|C4QV79|RCF1_PICPG Respiratory supercomplex factor 1, mitochondrial OS=Komagataella
pastoris (strain GS115 / ATCC 20864) GN=RCF1 PE=3 SV=1
Length = 152
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 87 EQFTQETGTEKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVAQG 146
++F + +K+ + K+ PLVPIGC+AT A+ + ++ GDR +Q R RV QG
Sbjct: 14 DEFEDMSILDKIWFRCKQQPLVPIGCLATCVAVALAAKGVRTGDRVNAQKWFRWRVGLQG 73
Query: 147 FTVLALTGG-LIYTAYQ 162
T++AL GG IY Q
Sbjct: 74 LTLVALVGGSYIYDRQQ 90
>sp|Q6CWT4|RCF1_KLULA Respiratory supercomplex factor 1, mitochondrial OS=Kluyveromyces
lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC
1267 / NRRL Y-1140 / WM37) GN=RCF1 PE=3 SV=1
Length = 158
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 42/60 (70%)
Query: 96 EKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVAQGFTVLALTGG 155
+K+I K+ PLVP+G +AT+ A+ + + ++K G++R +Q+ R RV QGFT++AL G
Sbjct: 22 DKMIYHCKQQPLVPLGTLATTGAVLLAVLNVKNGNKRKAQIWFRWRVALQGFTLIALVAG 81
>sp|A8MV81|HIG1C_HUMAN HIG1 domain family member 1C OS=Homo sapiens GN=HIGD1C PE=2 SV=2
Length = 97
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 91 QETGTEKLIRKFKENPLVPIGCVATSAALGVGLYSMKL-GDRRLSQMMMRTRVVAQGFTV 149
E +LIRK +++P VPIG + GLY +K D+++S ++ RV AQGF V
Sbjct: 12 DEGQLSRLIRKSRDSPFVPIGIAGFVTVVSCGLYKLKYRRDQKMSIHLIHMRVAAQGFVV 71
Query: 150 LALTGGLIYTAYQ 162
A+T G++Y+ Y+
Sbjct: 72 GAVTLGVLYSMYK 84
>sp|A7F679|RCF1_SCLS1 Respiratory supercomplex factor 1, mitochondrial OS=Sclerotinia
sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=rcf1
PE=3 SV=1
Length = 210
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 46/106 (43%), Gaps = 32/106 (30%)
Query: 85 GYEQFTQETGTEKLIRKFKENPLVPIG--------------------------------C 112
G F +E +KL R+ KE PL+P+G C
Sbjct: 13 GDTDFYEENRWQKLTRRLKEEPLIPLGKSTHTLTLSPSPPSLHHPSTQKLTHPLTHPPGC 72
Query: 113 VATSAALGVGLYSMKLGDRRLSQMMMRTRVVAQGFTVLALTGGLIY 158
+ T+ AL S++ GD +Q M R R+ AQGFT+LA+ G +Y
Sbjct: 73 ILTTLALVGATRSIRAGDHNRTQRMFRARIYAQGFTLLAMVAGSMY 118
>sp|Q7X843|ATL48_ARATH RING-H2 finger protein ATL48 OS=Arabidopsis thaliana GN=ATL48 PE=2
SV=2
Length = 349
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 92 ETGTEKLIRKFKE--NPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVAQGFTV 149
E E L ++ K NPLVP+G + T+ L GL S + G+ +L Q++MR RVV QG TV
Sbjct: 5 EPDMEDLFQEKKRVRNPLVPLGALMTAGVLTAGLISFRRGNSQLGQVLMRARVVVQGATV 64
Query: 150 LALTG 154
+ G
Sbjct: 65 ALMVG 69
>sp|A7TFU8|RCF1_VANPO Respiratory supercomplex factor 1, mitochondrial OS=Vanderwaltozyma
polyspora (strain ATCC 22028 / DSM 70294) GN=RCF1 PE=3
SV=1
Length = 162
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 96 EKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVAQGFTVLA-LTG 154
EKL+ + K+ PLVPIGC+ T+ A+ + S++ G++ +Q+ R RV Q T++A L G
Sbjct: 24 EKLVFRAKQQPLVPIGCLLTTGAIVLAAQSVRSGNKNKAQVFFRWRVGLQAATLVALLAG 83
Query: 155 GLIYTA 160
IY++
Sbjct: 84 SYIYSS 89
>sp|B6K2Z6|RCF1_SCHJY Respiratory supercomplex factor 1, mitochondrial
OS=Schizosaccharomyces japonicus (strain yFS275 /
FY16936) GN=rcf1 PE=3 SV=1
Length = 106
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 102 FKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVAQGFTVLALTGGLI 157
F++ PL+PIGC AT A +++ GD + R RV+AQ TVLA+ GG+
Sbjct: 34 FRDQPLIPIGCAATVGAFLFATRAIRRGDSMRANRFFRYRVLAQAATVLAIVGGVF 89
>sp|A5DHC2|RCF1_PICGU Respiratory supercomplex factor 1, mitochondrial OS=Meyerozyma
guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 /
JCM 1539 / NBRC 10279 / NRRL Y-324) GN=RCF1 PE=3 SV=1
Length = 150
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 96 EKLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVAQGFTVLALTGG 155
+K++ K K+ PLVPIG +AT+ A+ + S++ GDR +Q+ R R+ Q T++AL G
Sbjct: 5 QKMVFKSKQQPLVPIGALATTGAIILASKSIRRGDRIKTQIYFRYRIGFQLLTLVALVAG 64
Query: 156 LIYTAYQT 163
+Y YQT
Sbjct: 65 GLY--YQT 70
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,183,548
Number of Sequences: 539616
Number of extensions: 2098670
Number of successful extensions: 5609
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 5527
Number of HSP's gapped (non-prelim): 85
length of query: 163
length of database: 191,569,459
effective HSP length: 108
effective length of query: 55
effective length of database: 133,290,931
effective search space: 7331001205
effective search space used: 7331001205
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)