Diaphorina citri psyllid: psy1217

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130
MSLARLCRVPAPGELYSKQVAIVIRSSKVPIGKLEELDAGKHPYQEKEPLEAWPDNTNPHKGYEITLKNVFDIPGKLEELDAGKHPYQEKEPLEAWPDNTNPHTGEIGGPRGPEPTRYGDWERKGRVTDF
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEECcc
*****LCRVPAPGELYSKQVAIVIRSSKVPIG*****************************GYEITLKNVFDIPG*************************************PEPTRYGDWERKGRVTDF
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MSLARLCRVPAPGELYSKQVAIVIRSSKVPIGKLEELDAGKHPYQEKEPLEAWPDNTNPHKGYEITLKNVFDIPGKLEELDAGKHPYQEKEPLEAWPDNTNPHTGEIGGPRGPEPTRYGDWERKGRVTDF

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
UPF0369 protein C6orf57 homolog confidentQ8BTE0
UPF0369 protein C6orf57 confidentQ5VUM1

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005739 [CC]mitochondrionprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0090175 [BP]regulation of establishment of planar polarityprobableGO:0022603, GO:0050793, GO:0008150, GO:2000026, GO:2000027, GO:0051239, GO:0065007, GO:0050789

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2K5K, chain A
Confidence level:very confident
Coverage over the Query: 101-130
View the alignment between query and template
View the model in PyMOL