Query psy1218
Match_columns 136
No_of_seqs 177 out of 1277
Neff 8.8
Searched_HMMs 29240
Date Fri Aug 16 20:43:30 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1218.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1218hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pfd_A Acyl-COA dehydrogenase; 100.0 4.1E-32 1.4E-36 209.3 11.5 127 1-135 59-185 (393)
2 3nf4_A Acyl-COA dehydrogenase; 100.0 5.6E-32 1.9E-36 207.9 12.1 127 1-135 56-182 (387)
3 2d29_A Acyl-COA dehydrogenase; 100.0 5.3E-32 1.8E-36 208.2 11.9 128 1-135 47-174 (387)
4 1ukw_A Acyl-COA dehydrogenase; 100.0 7.1E-32 2.4E-36 207.0 12.5 127 1-135 45-171 (379)
5 2eba_A Putative glutaryl-COA d 100.0 7E-32 2.4E-36 207.4 12.1 128 1-135 51-179 (385)
6 1r2j_A Protein FKBI; polyketid 100.0 7.2E-32 2.5E-36 206.2 11.9 126 1-135 33-158 (366)
7 2vig_A Short-chain specific ac 100.0 1.1E-31 3.8E-36 206.7 13.0 128 1-135 46-173 (391)
8 2dvl_A Acyl-COA dehydrogenase; 100.0 7.1E-32 2.4E-36 206.5 11.6 128 1-135 43-170 (372)
9 1rx0_A Acyl-COA dehydrogenase 100.0 1.1E-31 3.8E-36 207.0 12.1 127 1-135 59-185 (393)
10 1ivh_A Isovaleryl-COA dehydrog 100.0 9.9E-32 3.4E-36 207.2 11.0 128 1-135 55-182 (394)
11 1buc_A Butyryl-COA dehydrogena 100.0 1.2E-31 4.2E-36 205.8 11.0 128 1-135 45-176 (383)
12 3p4t_A Putative acyl-COA dehyd 100.0 1.1E-31 3.6E-36 207.6 10.7 128 1-135 66-194 (403)
13 3ii9_A Glutaryl-COA dehydrogen 100.0 4.7E-32 1.6E-36 209.1 8.6 128 1-135 59-186 (396)
14 3r7k_A Probable acyl COA dehyd 100.0 1.6E-31 5.6E-36 206.6 11.0 128 1-135 69-197 (403)
15 2ix5_A Acyl-coenzyme A oxidase 100.0 3.1E-31 1.1E-35 207.2 12.4 127 1-135 95-221 (436)
16 1egd_A Medium chain acyl-COA d 100.0 2E-31 6.9E-36 205.6 11.1 127 1-135 56-182 (396)
17 2jif_A Short/branched chain sp 100.0 3.2E-31 1.1E-35 205.2 12.0 127 1-135 69-195 (404)
18 2pg0_A Acyl-COA dehydrogenase; 100.0 3.2E-31 1.1E-35 203.7 11.6 126 1-135 50-176 (385)
19 3sf6_A Glutaryl-COA dehydrogen 100.0 4.3E-31 1.5E-35 204.3 11.9 127 1-135 71-197 (403)
20 3swo_A Glutaryl-COA dehydrogen 100.0 8.5E-31 2.9E-35 202.3 11.4 127 1-135 66-192 (399)
21 3mpi_A Glutaryl-COA dehydrogen 100.0 4E-31 1.4E-35 203.8 9.4 127 1-135 46-175 (397)
22 4hr3_A Putative acyl-COA dehyd 100.0 1.4E-30 4.8E-35 201.8 9.9 127 2-135 68-198 (415)
23 2z1q_A Acyl-COA dehydrogenase; 100.0 2.6E-30 8.8E-35 208.0 11.7 127 1-135 69-197 (577)
24 3owa_A Acyl-COA dehydrogenase; 100.0 5.5E-30 1.9E-34 206.7 11.7 127 1-135 74-202 (597)
25 2c12_A Nitroalkane oxidase; ox 100.0 1.5E-29 5.3E-34 197.3 13.6 127 1-135 52-190 (439)
26 2uxw_A VERY-long-chain specifi 100.0 6.8E-30 2.3E-34 206.5 11.2 128 1-135 88-217 (607)
27 1siq_A GCD, glutaryl-COA dehyd 100.0 7.7E-30 2.6E-34 196.4 10.4 127 1-135 54-182 (392)
28 3mkh_A Nitroalkane oxidase; ox 100.0 3.5E-29 1.2E-33 195.1 10.3 126 1-135 54-191 (438)
29 2wbi_A Acyl-COA dehydrogenase 99.9 1.5E-27 5E-32 185.7 6.8 124 2-135 77-204 (428)
30 3mxl_A Nitrososynthase; flavin 99.9 7.7E-27 2.6E-31 179.4 8.7 123 1-135 48-176 (395)
31 3m9v_A FAD-dependent oxidoredu 99.9 1.8E-26 6.2E-31 179.9 8.2 123 1-135 59-187 (439)
32 2rfq_A 3-HSA hydroxylase, oxyg 99.9 1.1E-25 3.6E-30 173.1 11.5 114 1-135 44-157 (394)
33 2jbr_A P-hydroxyphenylacetate 99.9 1.5E-25 5.1E-30 174.0 11.4 114 1-135 72-185 (422)
34 2or0_A Hydroxylase; APC7385, r 99.9 1E-25 3.5E-30 174.5 10.2 114 1-135 57-170 (414)
35 3djl_A Protein AIDB; alpha hel 99.9 6.5E-22 2.2E-26 158.1 9.1 121 1-135 95-231 (541)
36 1w07_A Acyl-COA oxidase; oxido 99.8 1.4E-21 4.9E-26 159.2 5.0 117 3-135 68-192 (659)
37 2ddh_A Acyl-COA oxidase; beta 99.8 3.1E-19 1.1E-23 145.5 8.4 111 13-135 75-193 (661)
38 1u8v_A Gamma-aminobutyrate met 99.7 1.8E-17 6E-22 131.2 8.4 76 52-135 118-204 (490)
39 2yyk_A 4-hydroxyphenylacetate- 99.6 5.4E-16 1.8E-20 122.4 9.0 68 59-135 122-198 (481)
40 3hwc_A Chlorophenol-4-monooxyg 99.5 1.1E-14 3.7E-19 115.7 5.8 70 57-135 127-206 (515)
41 4g5e_A 2,4,6-trichlorophenol 4 98.4 4.1E-07 1.4E-11 72.4 5.9 72 61-135 134-207 (517)
No 1
>3pfd_A Acyl-COA dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: FDA; 2.10A {Mycobacterium thermoresistibile}
Probab=99.97 E-value=4.1e-32 Score=209.27 Aligned_cols=127 Identities=21% Similarity=0.174 Sum_probs=118.7
Q ss_pred CcccCCCcCCCCCCCCCCCCCHHHHHHHHHHHHhcCCchhHHHHHhhhhhHHHHhcCCCHHHHHhhcCCcccccccCeeE
Q psy1218 1 MGELGLMGVEVPEDLGGTGLDYLAYAIATEEISRGCASCGVIMSVNNSLYLGPLLKFDFRPMLLKLVFHGTLVCHEVVLG 80 (136)
Q Consensus 1 l~~~G~~~l~vP~~~GG~g~~~~~~~~~~e~la~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~~~~g~~~~ 80 (136)
|+++||+++.+|++|||.|+++.+++.+.||+++.|++.++++..|. .....|..+++++||++|+| ++++|+.++
T Consensus 59 l~~~G~~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~---~~~~G~~~~ 134 (393)
T 3pfd_A 59 LNSSGFSAIHVPEEYGGQGADSVATCIVIEEVARVDCSASLIPAVNK-LGTMGLILRGSEELKKQVLP---AVASGEAMA 134 (393)
T ss_dssp HHHHTCSCTTSCGGGTCCCCCHHHHHHHHHHHHTTCHHHHHHHHHHH-HTTHHHHHHCCHHHHHHHHH---HHHTTSCCE
T ss_pred HHHCCCCCCCCChhHCCCCCCHHHHHHHHHHHHhhCchHHHHHHHHH-HHHHHHHHhCCHHHHHHHHH---HHhCCCcee
Confidence 46899999999999999999999999999999999999998777665 56777899999999999999 999999999
Q ss_pred EEEecCCCCCCCcccCccccceeeeeCCCeEEEeeeEEEeeCCCCCCeEEEEeec
Q psy1218 81 VVESSEVCRGYNNFEKHYQHRTRCPLGPKGCASCGVIMSVNNSLYLGPILKFGNA 135 (136)
Q Consensus 81 ~~a~tEp~~Gsd~~~~~~~~~t~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~ 135 (136)
++++|||++|||+..+. |++++++|||+|||+|.|+||+.+||+++|+|+.
T Consensus 135 ~~a~tEp~~gsd~~~~~----t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~ 185 (393)
T 3pfd_A 135 SYALSEREAGSDAASMR----TRAVADGDDWILNGSKCWITNGGKSTWYTVMAVT 185 (393)
T ss_dssp EEECCBTTBSSCGGGCC----CEEEEETTEEEEEEEEEEEETTTTCSEEEEEEES
T ss_pred EEEEcCCCCCCCcccCe----eEEEEcCCEEEEeeEEEEecCCcccCEEEEEEEe
Confidence 99999999999998875 7999999999999999999999999999999985
No 2
>3nf4_A Acyl-COA dehydrogenase; seattle structural genomics center for infectious disease, S FAD, FADH, tuberculosis, oxidoredu; HET: FAD; 2.35A {Mycobacterium thermoresistibile}
Probab=99.97 E-value=5.6e-32 Score=207.92 Aligned_cols=127 Identities=24% Similarity=0.249 Sum_probs=119.8
Q ss_pred CcccCCCcCCCCCCCCCCCCCHHHHHHHHHHHHhcCCchhHHHHHhhhhhHHHHhcCCCHHHHHhhcCCcccccccCeeE
Q psy1218 1 MGELGLMGVEVPEDLGGTGLDYLAYAIATEEISRGCASCGVIMSVNNSLYLGPLLKFDFRPMLLKLVFHGTLVCHEVVLG 80 (136)
Q Consensus 1 l~~~G~~~l~vP~~~GG~g~~~~~~~~~~e~la~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~~~~g~~~~ 80 (136)
|+++||+++.+|++|||.|+++.+++.+.|++++.|+++++.+.+|. .....|..+++++||++|+| ++++|+.++
T Consensus 56 l~~~G~~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~---~~~~g~~~~ 131 (387)
T 3nf4_A 56 LGAAGLLSLPQPEEWGGGGQPYEVYLQVLEEIAARWASVAVAVSVHS-LSSHPLLVFGTEEQKKRWLP---GMLSGEQIG 131 (387)
T ss_dssp HHTTTTTSTTSCGGGTCCCCCHHHHHHHHHHHHTTCHHHHHHHHHHH-HHTHHHHHHSCHHHHHHHHH---HHTTSSCCE
T ss_pred HHHCCCCCCCCCHhhCCCCCCHHHHHHHHHHHHHhCchHHHHHHHHH-HHHHHHHHhCCHHHHHHHHH---HHhCCCeeE
Confidence 46899999999999999999999999999999999999998888776 67788999999999999999 999999999
Q ss_pred EEEecCCCCCCCcccCccccceeeeeCCCeEEEeeeEEEeeCCCCCCeEEEEeec
Q psy1218 81 VVESSEVCRGYNNFEKHYQHRTRCPLGPKGCASCGVIMSVNNSLYLGPILKFGNA 135 (136)
Q Consensus 81 ~~a~tEp~~Gsd~~~~~~~~~t~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~ 135 (136)
++++|||++|||+..+. |++++++|||+|||+|.||||+.+||+++|+|+.
T Consensus 132 ~~a~tEp~~gsd~~~~~----t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~ 182 (387)
T 3nf4_A 132 AYSLSEPQAGSDAAALR----CAATPTDGGYVINGSKSWITHGGKADFYTLFART 182 (387)
T ss_dssp EEECCBTTBSSCGGGCC----CEEEEETTEEEEEEEEEEEETTTTCSEEEEEEEC
T ss_pred EEEEcCCCCCCChhhCE----EEEEEeCCEEEEEeEEecccCCcccCEEEEEEEe
Confidence 99999999999998875 7899999999999999999999999999999985
No 3
>2d29_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: FAD; 1.65A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1 PDB: 1ws9_A 2cx9_A*
Probab=99.97 E-value=5.3e-32 Score=208.19 Aligned_cols=128 Identities=20% Similarity=0.225 Sum_probs=119.0
Q ss_pred CcccCCCcCCCCCCCCCCCCCHHHHHHHHHHHHhcCCchhHHHHHhhhhhHHHHhcCCCHHHHHhhcCCcccccccCeeE
Q psy1218 1 MGELGLMGVEVPEDLGGTGLDYLAYAIATEEISRGCASCGVIMSVNNSLYLGPLLKFDFRPMLLKLVFHGTLVCHEVVLG 80 (136)
Q Consensus 1 l~~~G~~~l~vP~~~GG~g~~~~~~~~~~e~la~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~~~~g~~~~ 80 (136)
|+++||+++.+|++|||.|+++.+++.+.|++++.|+++++.+.+|..+....|..+++++||++|+| ++++|+.++
T Consensus 47 l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~---~~~~g~~~~ 123 (387)
T 2d29_A 47 LAEFGVFGALVPEAYGGAGLSTRLFARMVEAIAYYDGALALTVASHNSLATGHILLAGSEAQKEAFLP---KLASGEALG 123 (387)
T ss_dssp HHTTTGGGSSSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHH---HHHTSSSCE
T ss_pred HHHCCCCCCCCChhhCCCCCCHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH---HHhCCCceE
Confidence 46899999999999999999999999999999999999988777764357788999999999999999 999999999
Q ss_pred EEEecCCCCCCCcccCccccceeeeeCCCeEEEeeeEEEeeCCCCCCeEEEEeec
Q psy1218 81 VVESSEVCRGYNNFEKHYQHRTRCPLGPKGCASCGVIMSVNNSLYLGPILKFGNA 135 (136)
Q Consensus 81 ~~a~tEp~~Gsd~~~~~~~~~t~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~ 135 (136)
|+++|||++|||+..+. |++++++|||+|||+|.||||+.+||+++|+|+.
T Consensus 124 ~~a~tEp~~Gsd~~~~~----t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~ 174 (387)
T 2d29_A 124 AWGLTEPGSGSDAAALK----TKAEKVEGGWRLNGTKQFITQGSVAGVYVVMART 174 (387)
T ss_dssp EEECCBTTBSSSGGGCC----CEEEEETTEEEEEEEEEEEETTTTCSEEEEEEEC
T ss_pred EEEeCCCCCCCCHhhCc----eEEEEeCCEEEEEeEEeccCCCCcCCEEEEEEEe
Confidence 99999999999998875 7999999999999999999999999999999975
No 4
>1ukw_A Acyl-COA dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: FAD; 2.40A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1
Probab=99.97 E-value=7.1e-32 Score=207.00 Aligned_cols=127 Identities=22% Similarity=0.265 Sum_probs=118.9
Q ss_pred CcccCCCcCCCCCCCCCCCCCHHHHHHHHHHHHhcCCchhHHHHHhhhhhHHHHhcCCCHHHHHhhcCCcccccccCeeE
Q psy1218 1 MGELGLMGVEVPEDLGGTGLDYLAYAIATEEISRGCASCGVIMSVNNSLYLGPLLKFDFRPMLLKLVFHGTLVCHEVVLG 80 (136)
Q Consensus 1 l~~~G~~~l~vP~~~GG~g~~~~~~~~~~e~la~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~~~~g~~~~ 80 (136)
|+++||+++.+|++|||.|+++.+++.+.|++++.|+++++.+.+|. .....|..+++++||++|+| ++++|+.++
T Consensus 45 l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~eel~~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~---~~~~g~~~~ 120 (379)
T 1ukw_A 45 LHEVGLLNAIIPEEYGGMGLKMLDEVIVGEELAYACMGIYTIPMASD-LGITPVLLAGTEEQKERFLR---PLTEKPALA 120 (379)
T ss_dssp HHHTTCTTTTSCGGGTSCCCCHHHHHHHHHHHHHHCHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHG---GGTSSSCEE
T ss_pred HHHCCCCCcCCChhhCCCCCCHHHHHHHHHHHHHhCchHHHHHHHHH-HHHHHHHHhCCHHHHHHHHH---HHhCCCceE
Confidence 46899999999999999999999999999999999999988777774 67788999999999999999 999999999
Q ss_pred EEEecCCCCCCCcccCccccceeeeeCCCeEEEeeeEEEeeCCCCCCeEEEEeec
Q psy1218 81 VVESSEVCRGYNNFEKHYQHRTRCPLGPKGCASCGVIMSVNNSLYLGPILKFGNA 135 (136)
Q Consensus 81 ~~a~tEp~~Gsd~~~~~~~~~t~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~ 135 (136)
++++|||++|||+..+. |++++++|||+|||+|.||||+.+||+++|+|+.
T Consensus 121 ~~a~tEp~~Gsd~~~~~----t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~ 171 (379)
T 1ukw_A 121 AFALSEPGNGSDAAALK----TRAIRQGDHYVLNGTKMWISNGGEAEWVVVFATV 171 (379)
T ss_dssp EEECCBTTBSSCGGGCC----CEEEEETTEEEEEEEEEEEETTTTEEEEEEEEES
T ss_pred EEEecCCCCCcChhhCe----EEEEEeCCEEEEEEEEecccCCCcCCEEEEEEEc
Confidence 99999999999998875 7899999999999999999999999999999985
No 5
>2eba_A Putative glutaryl-COA dehydrogenase; thermus thermophilius, FAD, STRU genomics, NPPSFA; HET: FAD; 2.21A {Thermus thermophilus}
Probab=99.97 E-value=7e-32 Score=207.40 Aligned_cols=128 Identities=20% Similarity=0.268 Sum_probs=117.0
Q ss_pred CcccCCCcCCCCCCCCCCCCCHHHHHHHHHHHHhcCCchhHHHHHhhhhhHHHHhcCCCHHHHHhhcCCcccccccCeeE
Q psy1218 1 MGELGLMGVEVPEDLGGTGLDYLAYAIATEEISRGCASCGVIMSVNNSLYLGPLLKFDFRPMLLKLVFHGTLVCHEVVLG 80 (136)
Q Consensus 1 l~~~G~~~l~vP~~~GG~g~~~~~~~~~~e~la~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~~~~g~~~~ 80 (136)
|+++||+++.+|++|||.|+++.+++.+.|++++.|+++++.+.+|.......|..+++++||++|+| ++++|+.++
T Consensus 51 l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~---~~~~g~~~~ 127 (385)
T 2eba_A 51 FAELGFLGPTLPPEYGGAGVSSAAYGLICYELERVDSGLRSFVSVQSSLVMYPIYAYGSEEQKREFLP---KLARGEMVG 127 (385)
T ss_dssp HHHHTCSSTTSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHTTHHHHHHHSCHHHHHHHHH---HHHTTSSCE
T ss_pred HHHCCCcCCCCchhhCCCCCCHHHHHHHHHHHHHhCchHHHHHHHHHhHHHHHHHHhCCHHHHHHHHH---HHhCCCeEE
Confidence 46899999999999999999999999999999999999998888775456778899999999999999 999999999
Q ss_pred EEEecCCCCCCCc-ccCccccceeeeeCCCeEEEeeeEEEeeCCCCCCeEEEEeec
Q psy1218 81 VVESSEVCRGYNN-FEKHYQHRTRCPLGPKGCASCGVIMSVNNSLYLGPILKFGNA 135 (136)
Q Consensus 81 ~~a~tEp~~Gsd~-~~~~~~~~t~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~ 135 (136)
++++|||++|||+ .++. |++++++|||+|||+|.||||+.+||+++|+|+.
T Consensus 128 ~~a~tEp~~Gsd~~~~~~----t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~ 179 (385)
T 2eba_A 128 CFGLTEPDGGSDPYGNMK----TRARREGDTWVLNGTKMWITNGNLAHLAVIWAKD 179 (385)
T ss_dssp EEECCCTTCTTSTTTTCC----CEEEC--CEEEEEEEEEEEETTTTCSEEEEEEEC
T ss_pred EEEeCCCCcCCCccccCe----eEEEEeCCEEEEEeeeeccCCCcccCEEEEEEEe
Confidence 9999999999999 7765 7899999999999999999999999999999975
No 6
>1r2j_A Protein FKBI; polyketide synthase, polyketide, acyl-COA dehydrogenase, , aldehyde dehydrogenase, oxidoreductase; HET: FAD; 2.10A {Streptomyces hygroscopicus} SCOP: a.29.3.1 e.6.1.1
Probab=99.97 E-value=7.2e-32 Score=206.20 Aligned_cols=126 Identities=20% Similarity=0.173 Sum_probs=115.8
Q ss_pred CcccCCCcCCCCCCCCCCCCCHHHHHHHHHHHHhcCCchhHHHHHhhhhhHHHHhcCCCHHHHHhhcCCcccccccCeeE
Q psy1218 1 MGELGLMGVEVPEDLGGTGLDYLAYAIATEEISRGCASCGVIMSVNNSLYLGPLLKFDFRPMLLKLVFHGTLVCHEVVLG 80 (136)
Q Consensus 1 l~~~G~~~l~vP~~~GG~g~~~~~~~~~~e~la~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~~~~g~~~~ 80 (136)
|+++||+++.+|++|||.|+++.+++.+.|++++.|+++++.+.+|.......|. +++++||++|+| ++++|+ +.
T Consensus 33 l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~-~g~~~q~~~~l~---~~~~G~-~~ 107 (366)
T 1r2j_A 33 LGADGLLCAEVAAEHGGLGLGSRENGEFTAHVGSLCSSLRSVMTSQGMAAWTVQR-LGDAGQRATFLK---ELTSGK-LA 107 (366)
T ss_dssp HHHTTTTSTTSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH-HSCHHHHHHHHH---HTTCC--CE
T ss_pred HHHCCCCCCCCChhhCCCCCCHHHHHHHHHHHHHHChHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHH---HHhCCC-ee
Confidence 4689999999999999999999999999999999999999888776435667788 999999999999 999999 99
Q ss_pred EEEecCCCCCCCcccCccccceeeeeCCCeEEEeeeEEEeeCCCCCCeEEEEeec
Q psy1218 81 VVESSEVCRGYNNFEKHYQHRTRCPLGPKGCASCGVIMSVNNSLYLGPILKFGNA 135 (136)
Q Consensus 81 ~~a~tEp~~Gsd~~~~~~~~~t~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~ 135 (136)
++++|||++|||+..+. |++++++|||+|||+|.||||+.+||+++|+|+.
T Consensus 108 ~~a~tEp~~Gsd~~~~~----t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~ 158 (366)
T 1r2j_A 108 AVGFSERQAGSDLSAMR----TRVRLDGDTAVVDGHKVWTTAAAYADHLVVFGLQ 158 (366)
T ss_dssp EEECCBTTBSSCGGGCC----CEEEEETTEEEEEEEEEEETTTTTCSEEEEEEBC
T ss_pred EEEeCCCCCCCchhhCE----eEEEEeCCEEEEEEEEecccCCcccCEEEEEEEe
Confidence 99999999999998875 7899999999999999999999999999999975
No 7
>2vig_A Short-chain specific acyl-COA dehydrogenase,; fatty acid metabolism, FAD, polymorphism, flavoprotein, mitochondrion, disease mutation; HET: FAD COS; 1.9A {Homo sapiens} PDB: 1jqi_A*
Probab=99.97 E-value=1.1e-31 Score=206.69 Aligned_cols=128 Identities=44% Similarity=0.622 Sum_probs=119.0
Q ss_pred CcccCCCcCCCCCCCCCCCCCHHHHHHHHHHHHhcCCchhHHHHHhhhhhHHHHhcCCCHHHHHhhcCCcccccccCeeE
Q psy1218 1 MGELGLMGVEVPEDLGGTGLDYLAYAIATEEISRGCASCGVIMSVNNSLYLGPLLKFDFRPMLLKLVFHGTLVCHEVVLG 80 (136)
Q Consensus 1 l~~~G~~~l~vP~~~GG~g~~~~~~~~~~e~la~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~~~~g~~~~ 80 (136)
|+++||+++.+|++|||.|+++.+++.+.|++++.|+++++.+.+|.......|..+++++||++|+| ++++|+.++
T Consensus 46 l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~---~~~~g~~~~ 122 (391)
T 2vig_A 46 MGGLGLLAMDVPEELGGAGLDYLAYAIAMEEISRGCASTGVIMSVNNSLYLGPILKFGSKEQKQAWVT---PFTSGDKIG 122 (391)
T ss_dssp HHHHTTTSTTSCGGGTSCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHTTHHHHHHHCCHHHHHHHTG---GGSSSSCCE
T ss_pred HHHCCCCCCCCCHhhCCCCCCHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH---HHhCCCceE
Confidence 46899999999999999999999999999999999999888777774357788999999999999999 999999999
Q ss_pred EEEecCCCCCCCcccCccccceeeeeCCCeEEEeeeEEEeeCCCCCCeEEEEeec
Q psy1218 81 VVESSEVCRGYNNFEKHYQHRTRCPLGPKGCASCGVIMSVNNSLYLGPILKFGNA 135 (136)
Q Consensus 81 ~~a~tEp~~Gsd~~~~~~~~~t~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~ 135 (136)
++++|||++|||+..+. |++++++|||+|||+|.||||+.+||+++|+|+.
T Consensus 123 ~~a~tEp~~Gsd~~~~~----t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~ 173 (391)
T 2vig_A 123 CFALSEPGNGSDAGAAS----TTARAEGDSWVLNGTKAWITNAWEASAAVVFAST 173 (391)
T ss_dssp EEECCBTTBSSSGGGCC----CEEEEETTEEEEEEEEEEEETTTTCSEEEEEEEC
T ss_pred EEEecCCCCCCCcccce----eEEEEeCCEEEEeeEEEeecCCCcCCEEEEEEEe
Confidence 99999999999998875 7899999999999999999999999999999975
No 8
>2dvl_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project on protein STR and functional analyses; HET: FAD; 2.50A {Thermus thermophilus}
Probab=99.97 E-value=7.1e-32 Score=206.53 Aligned_cols=128 Identities=24% Similarity=0.307 Sum_probs=118.9
Q ss_pred CcccCCCcCCCCCCCCCCCCCHHHHHHHHHHHHhcCCchhHHHHHhhhhhHHHHhcCCCHHHHHhhcCCcccccccCeeE
Q psy1218 1 MGELGLMGVEVPEDLGGTGLDYLAYAIATEEISRGCASCGVIMSVNNSLYLGPLLKFDFRPMLLKLVFHGTLVCHEVVLG 80 (136)
Q Consensus 1 l~~~G~~~l~vP~~~GG~g~~~~~~~~~~e~la~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~~~~g~~~~ 80 (136)
|+++||+++.+|++|||.|+++.+++.+.|++++.|+++++.+.+|+......|..+++++||++|+| ++++|+.++
T Consensus 43 l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~---~~~~g~~~~ 119 (372)
T 2dvl_A 43 LAELGLLGMTTPEEWGGVGLDSVTWALALEELAAADPSVAVIVSVTSGLPQYMLLRFGSEAQKRRYLV---PLARGEWIG 119 (372)
T ss_dssp HHHTTGGGTTSCGGGTSCCCCHHHHHHHHHHHHHHCHHHHHHHHHHTSHHHHHHHHHCCHHHHHHTHH---HHHTTSSCE
T ss_pred HHhCCCCCCCCChhhCCCCCCHHHHHHHHHHHHhcCcHHHHHHHHhhhHHHHHHHHhCCHHHHHHHHH---HHhCCCeEE
Confidence 46899999999999999999999999999999999999888887773356778999999999999999 999999999
Q ss_pred EEEecCCCCCCCcccCccccceeeeeCCCeEEEeeeEEEeeCCCCCCeEEEEeec
Q psy1218 81 VVESSEVCRGYNNFEKHYQHRTRCPLGPKGCASCGVIMSVNNSLYLGPILKFGNA 135 (136)
Q Consensus 81 ~~a~tEp~~Gsd~~~~~~~~~t~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~ 135 (136)
++++|||++|||+..+. |++++++|||+|||+|.||||+.+||+++|+|+.
T Consensus 120 ~~a~tEp~~Gsd~~~~~----t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~ 170 (372)
T 2dvl_A 120 AFCLTEPQAGSDAKSLR----AEARRVKGGFVLNGVKSWITSAGHAHLYVVMART 170 (372)
T ss_dssp EEECCCSSCSSCGGGCC----CEEEEETTEEEEEEEEEEEETTTTCSEEEEEEEE
T ss_pred EEEecCCCCCCChhhCe----eEEEEECCEEEEEeEEEeecCCCcCCEEEEEEEe
Confidence 99999999999998875 7899999999999999999999999999999975
No 9
>1rx0_A Acyl-COA dehydrogenase family member 8, mitochondrial; flavoprotein, coenzyme A, oxidoreductase; HET: FAD 2MC; 1.77A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=99.97 E-value=1.1e-31 Score=206.96 Aligned_cols=127 Identities=18% Similarity=0.196 Sum_probs=118.4
Q ss_pred CcccCCCcCCCCCCCCCCCCCHHHHHHHHHHHHhcCCchhHHHHHhhhhhHHHHhcCCCHHHHHhhcCCcccccccCeeE
Q psy1218 1 MGELGLMGVEVPEDLGGTGLDYLAYAIATEEISRGCASCGVIMSVNNSLYLGPLLKFDFRPMLLKLVFHGTLVCHEVVLG 80 (136)
Q Consensus 1 l~~~G~~~l~vP~~~GG~g~~~~~~~~~~e~la~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~~~~g~~~~ 80 (136)
|+++||+++.+|++|||.|+++.+.+.+.|++++.|++.++.+..|. .....|..+++++||++|+| ++++|+.++
T Consensus 59 l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~-~~~~~l~~~g~~~qk~~~l~---~~~~G~~~~ 134 (393)
T 1rx0_A 59 AAQLGFGGVYIQTDVGGSGLSRLDTSVIFEALATGCTSTTAYISIHN-MCAWMIDSFGNEEQRHKFCP---PLCTMEKFA 134 (393)
T ss_dssp HHHTTCSSTTSCGGGTCCCCCHHHHHHHHHHHHTTCHHHHHHHHHHH-HHHHHHHHHSCHHHHHHHHH---HHHTTSSCE
T ss_pred HHhCCCCcCCCChhhCCCCCCHHHHHHHHHHHHHhCcchhHHHHHhH-HHHHHHHHHCCHHHHHHHHH---HHhCCCceE
Confidence 46899999999999999999999999999999999999888777775 56788899999999999999 999999999
Q ss_pred EEEecCCCCCCCcccCccccceeeeeCCCeEEEeeeEEEeeCCCCCCeEEEEeec
Q psy1218 81 VVESSEVCRGYNNFEKHYQHRTRCPLGPKGCASCGVIMSVNNSLYLGPILKFGNA 135 (136)
Q Consensus 81 ~~a~tEp~~Gsd~~~~~~~~~t~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~ 135 (136)
++++|||++|||+..+. |++++++|+|+|||+|.||||+.+||+++|+|+.
T Consensus 135 ~~a~tEp~~gsd~~~~~----t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~a~~ 185 (393)
T 1rx0_A 135 SYCLTEPGSGSDAASLL----TSAKKQGDHYILNGSKAFISGAGESDIYVVMCRT 185 (393)
T ss_dssp EEECCBTTBSSSGGGCC----CEEEEETTEEEEEEEEEEEETTTTCSEEEEEEES
T ss_pred EEEecCCCCCcCcccce----eEEEEcCCEEEEEeEEEeecCCccCCEEEEEEEc
Confidence 99999999999998764 7899999999999999999999999999999975
No 10
>1ivh_A Isovaleryl-COA dehydrogenase; oxidoreductase, acyl-COA dehydrogenase, flavoprotein, isovaleric acidemia; HET: FAD COS; 2.60A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=99.97 E-value=9.9e-32 Score=207.19 Aligned_cols=128 Identities=20% Similarity=0.331 Sum_probs=119.5
Q ss_pred CcccCCCcCCCCCCCCCCCCCHHHHHHHHHHHHhcCCchhHHHHHhhhhhHHHHhcCCCHHHHHhhcCCcccccccCeeE
Q psy1218 1 MGELGLMGVEVPEDLGGTGLDYLAYAIATEEISRGCASCGVIMSVNNSLYLGPLLKFDFRPMLLKLVFHGTLVCHEVVLG 80 (136)
Q Consensus 1 l~~~G~~~l~vP~~~GG~g~~~~~~~~~~e~la~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~~~~g~~~~ 80 (136)
|+++||+++.+|++|||.|+++.+.+.+.|++++.|+++++.+.+|.......|..+++++||++|+| ++++|+.++
T Consensus 55 l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~---~l~~G~~~~ 131 (394)
T 1ivh_A 55 LGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISRASGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLP---KLISGEYIG 131 (394)
T ss_dssp HHHHTCTTTTSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHTTTHHHHHHHCCHHHHHHHHH---HHHHTSSCE
T ss_pred HHHCCCCCCCCCcccCCCCCCHHHHHHHHHHHHhhchhHHHHHHHhhHHHHHHHHHhCCHHHHHHHHH---HHhCCCeEE
Confidence 36899999999999999999999999999999999999998888775357888999999999999999 999999999
Q ss_pred EEEecCCCCCCCcccCccccceeeeeCCCeEEEeeeEEEeeCCCCCCeEEEEeec
Q psy1218 81 VVESSEVCRGYNNFEKHYQHRTRCPLGPKGCASCGVIMSVNNSLYLGPILKFGNA 135 (136)
Q Consensus 81 ~~a~tEp~~Gsd~~~~~~~~~t~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~ 135 (136)
++++|||++|||+..+. |++++++|||+|||+|.||||+.+||+++|+|+.
T Consensus 132 ~~a~tEp~~gsd~~~~~----t~A~~~~~g~~lnG~K~~vs~~~~Ad~~~v~ar~ 182 (394)
T 1ivh_A 132 ALAMSEPNAGSDVVSMK----LKAEKKGNHYILNGNKFWITNGPDADVLIVYAKT 182 (394)
T ss_dssp EEECCBTTBSSSGGGCC----CEEEECSSEEEEEEEEEEEETGGGCSEEEEEEES
T ss_pred EEEecCCCCCcCcccce----EEEEEcCCEEEEEeEEEeeCCCCcCCEEEEEEEe
Confidence 99999999999998875 7899999999999999999999999999999975
No 11
>1buc_A Butyryl-COA dehydrogenase; acyl-COA dehydrogenase short-chain acyl-COA dehydrogenase, flavoprotein, oxidoreductase; HET: CAA FAD; 2.50A {Megasphaera elsdenii} SCOP: a.29.3.1 e.6.1.1
Probab=99.97 E-value=1.2e-31 Score=205.82 Aligned_cols=128 Identities=22% Similarity=0.280 Sum_probs=119.2
Q ss_pred CcccCCCcCCCCCCCCCCC---CCHHHHHHHHHHHHhcCCchhHHHHHhhhhhHHHHhcCCCHHHHHhhcCCcccccccC
Q psy1218 1 MGELGLMGVEVPEDLGGTG---LDYLAYAIATEEISRGCASCGVIMSVNNSLYLGPLLKFDFRPMLLKLVFHGTLVCHEV 77 (136)
Q Consensus 1 l~~~G~~~l~vP~~~GG~g---~~~~~~~~~~e~la~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~~~~g~ 77 (136)
|++.||+++.+|++|||.| +++.+++.+.|++++.|+++++.+.+|.......|..+++++||++|+| ++++|+
T Consensus 45 l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~---~~~~g~ 121 (383)
T 1buc_A 45 LLSLGITGAYFEEKYGGSGDDGGDVLSYILAVEELAKYDAGVAITLSATVSLCANPIWQFGTEAQKEKFLV---PLVEGT 121 (383)
T ss_dssp HHTTSGGGTTSCGGGTCGGGGTCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHTHHHHHHHCCHHHHHHTHH---HHHHTS
T ss_pred HHHCCCCCCCCChhhCCCCCCCCCHHHHHHHHHHHHhhChHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHH---HHhCCC
Confidence 4689999999999999999 9999999999999999999988777774467788999999999999999 999999
Q ss_pred eeEEEEecCCCCCCCcccCccccceeeeeC-CCeEEEeeeEEEeeCCCCCCeEEEEeec
Q psy1218 78 VLGVVESSEVCRGYNNFEKHYQHRTRCPLG-PKGCASCGVIMSVNNSLYLGPILKFGNA 135 (136)
Q Consensus 78 ~~~~~a~tEp~~Gsd~~~~~~~~~t~a~~~-~~g~~l~G~k~~vs~~~~a~~~lv~a~~ 135 (136)
.++++++|||++|||+..+. |+++++ +|+|+|||+|.||||+.+||+++|+|+.
T Consensus 122 ~~~~~a~tEp~~Gsd~~~~~----t~A~~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~ 176 (383)
T 1buc_A 122 KLGAFGLTEPNAGTDASGQQ----TIATKNDDGTYTLNGSKIFITNGGAADIYIVFAMT 176 (383)
T ss_dssp SCEEEECCBTTBSSCGGGCC----CEEEECTTSCEEEEEEEEEEETTTTCSEEEEEEES
T ss_pred eeEEEEeCCCCCCCChhhCE----eEEEEcCCCEEEEEEEEeccCCCCcCCEEEEEEEe
Confidence 99999999999999998875 789999 9999999999999999999999999985
No 12
>3p4t_A Putative acyl-COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FAO; 1.70A {Mycobacterium smegmatis} PDB: 3oib_A*
Probab=99.97 E-value=1.1e-31 Score=207.65 Aligned_cols=128 Identities=17% Similarity=0.171 Sum_probs=118.5
Q ss_pred CcccCCCcCCCCCCCCCCCCCHHHHHHHHHHHHhcCCch-hHHHHHhhhhhHHHHhcCCCHHHHHhhcCCcccccccCee
Q psy1218 1 MGELGLMGVEVPEDLGGTGLDYLAYAIATEEISRGCASC-GVIMSVNNSLYLGPLLKFDFRPMLLKLVFHGTLVCHEVVL 79 (136)
Q Consensus 1 l~~~G~~~l~vP~~~GG~g~~~~~~~~~~e~la~~~~~~-~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~~~~g~~~ 79 (136)
|++.||+++.+|++|||.|+++.+++.+.|++++.|++. ++.+.+|.......|..+++++||++|+| ++++|+.+
T Consensus 66 l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~---~~~~G~~~ 142 (403)
T 3p4t_A 66 AAELGLLGAGFPEDAGGSGGDGADPVVICEEMHYAGSPGGVYASLFTCGIAVPHMIASGDQRLIDTYVR---PTLRGEKI 142 (403)
T ss_dssp HHHTTCTTBTSCGGGTCCBCCTHHHHHHHHHHHHTTCCHHHHHHHSTHHHHSHHHHHHTCHHHHHHTHH---HHHTTSSC
T ss_pred HHHCCCCcCCCChhhCCCCCCHHHHHHHHHHHHHhCCchhhhHHHhhhhhHHHHHHHhCCHHHHHHHHH---HHhCCCeE
Confidence 468999999999999999999999999999999999998 77666665456778899999999999999 99999999
Q ss_pred EEEEecCCCCCCCcccCccccceeeeeCCCeEEEeeeEEEeeCCCCCCeEEEEeec
Q psy1218 80 GVVESSEVCRGYNNFEKHYQHRTRCPLGPKGCASCGVIMSVNNSLYLGPILKFGNA 135 (136)
Q Consensus 80 ~~~a~tEp~~Gsd~~~~~~~~~t~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~ 135 (136)
+++++|||++|||+.++. |++++++|||+|||+|.||||+.+||+++|+|+.
T Consensus 143 ~~~a~tEp~~Gsd~~~~~----t~A~~~~~g~~lnG~K~~vs~a~~Ad~~~v~a~~ 194 (403)
T 3p4t_A 143 GALAITEPGGGSDVGHLR----TRADLDGDHYVINGAKTYITSGVRADYVVTAART 194 (403)
T ss_dssp EEEECCBTTBSSCGGGCC----CEEEEETTEEEEEEEEEEEETTTTCSEEEEEEEC
T ss_pred EEEEecCCCCCCCcccce----EEEEEeCCEEEEEEEEEEecCCcccCEEEEEEEe
Confidence 999999999999998875 7999999999999999999999999999999985
No 13
>3ii9_A Glutaryl-COA dehydrogenase; slipchip, microfluidics, screening, optimization, protein crystallization, structural genomics; HET: PGE PG4; 1.74A {Burkholderia pseudomallei 1710B} PDB: 3eon_A* 3eom_A* 3gqt_A* 3gnc_A* 3d6b_A
Probab=99.97 E-value=4.7e-32 Score=209.13 Aligned_cols=128 Identities=28% Similarity=0.428 Sum_probs=113.1
Q ss_pred CcccCCCcCCCCCCCCCCCCCHHHHHHHHHHHHhcCCchhHHHHHhhhhhHHHHhcCCCHHHHHhhcCCcccccccCeeE
Q psy1218 1 MGELGLMGVEVPEDLGGTGLDYLAYAIATEEISRGCASCGVIMSVNNSLYLGPLLKFDFRPMLLKLVFHGTLVCHEVVLG 80 (136)
Q Consensus 1 l~~~G~~~l~vP~~~GG~g~~~~~~~~~~e~la~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~~~~g~~~~ 80 (136)
|++.||+++.+|++|||.|+++.+++.+.||+++.|+++++.+.+|.......|..+++++||++|+| ++++|+.++
T Consensus 59 l~~~Gl~~l~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~---~~~~G~~~~ 135 (396)
T 3ii9_A 59 MGEIGLLGPTIPEQYGGPGLDYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLP---KLATGEWIG 135 (396)
T ss_dssp HHHTTCSSTTSCGGGTSCCCCHHHHHHHHHHHHTTCHHHHHHHHCCCCCCCHHHHHHSCHHHHHHHHH---HHHHTSSCE
T ss_pred HHhCCCCCCCCChhhCCCCCCHHHHHHHHHHHHHhChhHHHHHHhhhhhHHHHHHHhCCHHHHHHHHH---HHhCCCeee
Confidence 46899999999999999999999999999999999999888777765455677999999999999999 999999999
Q ss_pred EEEecCCCCCCCcccCccccceeeeeCCCeEEEeeeEEEeeCCCCCCeEEEEeec
Q psy1218 81 VVESSEVCRGYNNFEKHYQHRTRCPLGPKGCASCGVIMSVNNSLYLGPILKFGNA 135 (136)
Q Consensus 81 ~~a~tEp~~Gsd~~~~~~~~~t~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~ 135 (136)
++++|||++|||+..+. |++++++|||+|||+|.||||+.+||+++|+|+.
T Consensus 136 ~~a~tEp~~Gsd~~~~~----t~A~~~~~g~~lnG~K~~vs~a~~Ad~~~v~a~~ 186 (396)
T 3ii9_A 136 CFGLTEPNHGSDPGSMV----TRARKVPGGYSLSGSKMWITNSPIADVFVVWAKL 186 (396)
T ss_dssp EEECCCCC------CCC----CEEEEETTEEEEEEEEEEEETGGGCSEEEEEEEE
T ss_pred EEEecCCCCCCChhhCe----eEEEEeCCEEEEEEEEEeECCCccCCEEEEEEEe
Confidence 99999999999998875 7999999999999999999999999999999975
No 14
>3r7k_A Probable acyl COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FDA; 2.50A {Mycobacterium abscessus}
Probab=99.97 E-value=1.6e-31 Score=206.60 Aligned_cols=128 Identities=16% Similarity=0.190 Sum_probs=117.5
Q ss_pred CcccCCCcCCCCCCCCCCCCCHHHHHHHHHHHHhc-CCchhHHHHHhhhhhHHHHhcCCCHHHHHhhcCCcccccccCee
Q psy1218 1 MGELGLMGVEVPEDLGGTGLDYLAYAIATEEISRG-CASCGVIMSVNNSLYLGPLLKFDFRPMLLKLVFHGTLVCHEVVL 79 (136)
Q Consensus 1 l~~~G~~~l~vP~~~GG~g~~~~~~~~~~e~la~~-~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~~~~g~~~ 79 (136)
|+++||+++.+|++|||.|+++.+++.+.|++++. |+++++.+.++.......|..+++++||++|+| ++++|+.+
T Consensus 69 l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~---~~~~G~~~ 145 (403)
T 3r7k_A 69 AAEVGLLGIGFPEEVGGSGGNAIDSALVTEAILAAGGSTGVCAALFTHGIALPHIAANGSDALIERYVR---PTLAGKMI 145 (403)
T ss_dssp HHHHTCTTBTSCGGGTCCBCCHHHHHHHHHHHHHTTCCHHHHHHHCTHHHHSHHHHHHCCHHHHHHHHH---HHHTTSCC
T ss_pred HHhCCCCcCCCChhhCCCCCCHHHHHHHHHHHHhcCCchHHHHHHHHhhHHHHHHHHhCCHHHHHHHHH---HHhCCCee
Confidence 46899999999999999999999999999999998 888877666433367788999999999999999 99999999
Q ss_pred EEEEecCCCCCCCcccCccccceeeeeCCCeEEEeeeEEEeeCCCCCCeEEEEeec
Q psy1218 80 GVVESSEVCRGYNNFEKHYQHRTRCPLGPKGCASCGVIMSVNNSLYLGPILKFGNA 135 (136)
Q Consensus 80 ~~~a~tEp~~Gsd~~~~~~~~~t~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~ 135 (136)
+++++|||++|||+..+. |++++++|||+|||+|.||||+.+||+++|+|+.
T Consensus 146 ~~~a~tEp~~Gsd~~~~~----t~A~~~~~g~~lnG~K~~vs~a~~Ad~~~v~a~~ 197 (403)
T 3r7k_A 146 GSLGVTEPGAGSDVANLR----TRAVREGDTYVVNGAKTFITSGVRADFVTTAVRT 197 (403)
T ss_dssp EEEECCBTTBSSCGGGCC----CEEEECSSEEEEEEEEEEEETTTTCSEEEEEEEC
T ss_pred EEEEecCCCCCCChhhce----EEEEEECCEEEEEEEEEcccCCccCCEEEEEEEc
Confidence 999999999999998875 7999999999999999999999999999999985
No 15
>2ix5_A Acyl-coenzyme A oxidase 4, peroxisomal; FAD, ACX4, flavin, peroxisome, glyoxysome, fatty acid metabo lipid metabolism, acyl-COA oxidase; HET: CAA FAD; 2.7A {Arabidopsis thaliana} PDB: 2ix6_A*
Probab=99.97 E-value=3.1e-31 Score=207.17 Aligned_cols=127 Identities=23% Similarity=0.226 Sum_probs=117.5
Q ss_pred CcccCCCcCCCCCCCCCCCCCHHHHHHHHHHHHhcCCchhHHHHHhhhhhHHHHhcCCCHHHHHhhcCCcccccccCeeE
Q psy1218 1 MGELGLMGVEVPEDLGGTGLDYLAYAIATEEISRGCASCGVIMSVNNSLYLGPLLKFDFRPMLLKLVFHGTLVCHEVVLG 80 (136)
Q Consensus 1 l~~~G~~~l~vP~~~GG~g~~~~~~~~~~e~la~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~~~~g~~~~ 80 (136)
|+++||+++.+| +|||.|+++.+.+.+.||+++.|++.++++.+|..+....|..+++++||++|+| ++++|+.++
T Consensus 95 l~e~Gl~~l~~p-e~GG~G~~~~~~~~v~eela~~~~~~~~~~~~~~~~~~~~l~~~gt~~qk~~~l~---~l~~G~~~~ 170 (436)
T 2ix5_A 95 LGAMGVAGGSIK-GYGCPGLSITANAIATAEIARVDASCSTFILVHSSLGMLTIALCGSEAQKEKYLP---SLAQLNTVA 170 (436)
T ss_dssp HHTTTCTTTTCC-STTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHTTHHHHHHHHSCHHHHHHHHH---HHHTTSSCE
T ss_pred HHHcCCCcCcCC-CCCCCCCCHHHHHHHHHHHHhhCccHHHHHHhHHHHHHHHHHHhCCHHHHHHHHH---HHhCCCeee
Confidence 468999999999 9999999999999999999999999887777665456778899999999999999 999999999
Q ss_pred EEEecCCCCCCCcccCccccceeeeeCCCeEEEeeeEEEeeCCCCCCeEEEEeec
Q psy1218 81 VVESSEVCRGYNNFEKHYQHRTRCPLGPKGCASCGVIMSVNNSLYLGPILKFGNA 135 (136)
Q Consensus 81 ~~a~tEp~~Gsd~~~~~~~~~t~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~ 135 (136)
|+++|||++|||+..+. |++++++|+|+|||+|.||||+.+||+++|+|+.
T Consensus 171 a~a~tEp~~GSd~~~~~----t~A~~~gdg~vLnG~K~~is~a~~Ad~~lv~Ar~ 221 (436)
T 2ix5_A 171 CWALTEPDNGSDASGLG----TTATKVEGGWKINGQKRWIGNSTFADLLIIFARN 221 (436)
T ss_dssp EEECCBTTBSSCGGGCC----CEEEEETTEEEEEEEEEEEETTTTCSEEEEEEEE
T ss_pred EEEecCCCCCCCcccce----EEEEEeCCEEEEeeeccCCCCCcccCEEEEEEEE
Confidence 99999999999998775 7999999999999999999999999999999975
No 16
>1egd_A Medium chain acyl-COA dehydrogenase; flavoprotein, electron transfer; HET: FAD; 2.40A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 1egc_A* 1ege_A* 1t9g_A* 2a1t_A* 1udy_A* 3mdd_A* 3mde_A*
Probab=99.97 E-value=2e-31 Score=205.58 Aligned_cols=127 Identities=21% Similarity=0.221 Sum_probs=116.6
Q ss_pred CcccCCCcCCCCCCCCCCCCCHHHHHHHHHHHHhcCCchhHHHHHhhhhhHHHHhcCCCHHHHHhhcCCcccccccCeeE
Q psy1218 1 MGELGLMGVEVPEDLGGTGLDYLAYAIATEEISRGCASCGVIMSVNNSLYLGPLLKFDFRPMLLKLVFHGTLVCHEVVLG 80 (136)
Q Consensus 1 l~~~G~~~l~vP~~~GG~g~~~~~~~~~~e~la~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~~~~g~~~~ 80 (136)
|+++||+++.+|++|||.|+++.+++.+.|++++.|+++++.+ +|..+....|..+++++||++|+| ++++|+.++
T Consensus 56 l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~-~~~~~~~~~l~~~g~~~q~~~~l~---~~~~g~~~~ 131 (396)
T 1egd_A 56 AWELGLMNTHIPENCGGLGLGTFDACLISEELAYGCTGVQTAI-EGNSLGQMPIIIAGNDQQKKKYLG---RMTEEPLMC 131 (396)
T ss_dssp HHHHTCSSTTSCGGGTSCCCCHHHHHHHHHHHHHHCHHHHHHH-HHHHHHTHHHHHHCCHHHHHHHHH---HHHHSCCCE
T ss_pred HHHCCCCCCCCchhhCCCCCCHHHHHHHHHHHHhhCccHHHHH-HhhhHHHHHHHHhCCHHHHHHHHH---HHhCCCceE
Confidence 4689999999999999999999999999999999999988876 554355667889999999999999 999999999
Q ss_pred EEEecCCCCCCCcccCccccceeeeeCCCeEEEeeeEEEeeCCCCCCeEEEEeec
Q psy1218 81 VVESSEVCRGYNNFEKHYQHRTRCPLGPKGCASCGVIMSVNNSLYLGPILKFGNA 135 (136)
Q Consensus 81 ~~a~tEp~~Gsd~~~~~~~~~t~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~ 135 (136)
++++|||++|||+..+. |++++++|||+|||+|.||||+.+||+++|+|+.
T Consensus 132 ~~a~tEp~~Gsd~~~~~----t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~ 182 (396)
T 1egd_A 132 AYCVTEPGAGSDVAGIK----TKAEKKGDEYIINGQKMWITNGGKANWYFLLARS 182 (396)
T ss_dssp EEECCBTTBSSSGGGCC----CEEEECSSEEEEEEEEEEEETTTTCSEEEEEEEC
T ss_pred EEEecCCCCCcchhhCe----eEEEEeCCEEEEEEEEEcccCCcccCEEEEEEEe
Confidence 99999999999998875 7899999999999999999999999999999975
No 17
>2jif_A Short/branched chain specific acyl-COA dehydrogen; mitochondrion, oxidoreductase, transit peptide, fatty acid metabolism, FAD, flavoprotein; HET: FAD COS; 2.0A {Homo sapiens}
Probab=99.97 E-value=3.2e-31 Score=205.18 Aligned_cols=127 Identities=25% Similarity=0.299 Sum_probs=117.2
Q ss_pred CcccCCCcCCCCCCCCCCCCCHHHHHHHHHHHHhcCCchhHHHHHhhhhhHHHHhcCCCHHHHHhhcCCcccccccCeeE
Q psy1218 1 MGELGLMGVEVPEDLGGTGLDYLAYAIATEEISRGCASCGVIMSVNNSLYLGPLLKFDFRPMLLKLVFHGTLVCHEVVLG 80 (136)
Q Consensus 1 l~~~G~~~l~vP~~~GG~g~~~~~~~~~~e~la~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~~~~g~~~~ 80 (136)
|+++||+++.+|++|||.|+++.+++.+.||+++.|+++++.+.+|.......|..+++++||++|+| ++.+|. ++
T Consensus 69 l~e~Gl~~l~~P~e~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~qk~~~l~---~~~~g~-~~ 144 (404)
T 2jif_A 69 LFQQGLMGIEVDPEYGGTGASFLSTVLVIEELAKVDASVAVFCEIQNTLINTLIRKHGTEEQKATYLP---QLTTEK-VG 144 (404)
T ss_dssp HHHTTTTSSSSCGGGTCCCCCHHHHHHHHHHHHTTCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHH---HHHHTC-CE
T ss_pred HHHCCCCccCCchhhCCCCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH---HHhCCC-cc
Confidence 46899999999999999999999999999999999999998887775456778899999999999999 999985 88
Q ss_pred EEEecCCCCCCCcccCccccceeeeeCCCeEEEeeeEEEeeCCCCCCeEEEEeec
Q psy1218 81 VVESSEVCRGYNNFEKHYQHRTRCPLGPKGCASCGVIMSVNNSLYLGPILKFGNA 135 (136)
Q Consensus 81 ~~a~tEp~~Gsd~~~~~~~~~t~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~ 135 (136)
++++|||++|||+..+. |++++++|+|+|||+|.||||+.+||+++|+|++
T Consensus 145 ~~a~tEp~~Gsd~~~~~----t~A~~~g~g~vlnG~K~~is~a~~Ad~~~v~ar~ 195 (404)
T 2jif_A 145 SFCLSEAGAGSDSFALK----TRADKEGDYYVLNGSKMWISSAEHAGLFLVMANV 195 (404)
T ss_dssp EEECCBTTBSSSGGGCC----CEEEEETTEEEEEEEEEEEETTTTCSEEEEEEES
T ss_pred eEEecCCCCCCChhhce----eEEEEeCCEEEEEeEEEeecCCcccCEEEEEEEe
Confidence 99999999999998775 7899999999999999999999999999999975
No 18
>2pg0_A Acyl-COA dehydrogenase; GK1316, geobacillus kaustophilus HTA structural genomics, PSI, protein structure initiative; HET: FAD; 1.80A {Geobacillus kaustophilus}
Probab=99.97 E-value=3.2e-31 Score=203.74 Aligned_cols=126 Identities=16% Similarity=0.142 Sum_probs=116.2
Q ss_pred CcccCCCcCCCCCCCCCCCCCHHHHHHHHHHHHhcC-CchhHHHHHhhhhhHHHHhcCCCHHHHHhhcCCcccccccCee
Q psy1218 1 MGELGLMGVEVPEDLGGTGLDYLAYAIATEEISRGC-ASCGVIMSVNNSLYLGPLLKFDFRPMLLKLVFHGTLVCHEVVL 79 (136)
Q Consensus 1 l~~~G~~~l~vP~~~GG~g~~~~~~~~~~e~la~~~-~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~~~~g~~~ 79 (136)
|+++||+++.+|++|||.|+++.+++.+.|++++.| +++++.+ |.......|..+++++||++|+| ++++|+.+
T Consensus 50 l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~~~~~~~--~~~~~~~~l~~~g~~~q~~~~l~---~~~~g~~~ 124 (385)
T 2pg0_A 50 MGENGFLCPWVDEKYGGLNADFAYSVVINEELEKVGSSLVGIGL--HNDIVTPYIASYGTEEQKQKWLP---KCVTGELI 124 (385)
T ss_dssp HHHTTCSSTTSCGGGTCCCCCHHHHHHHHHHHHHHCGGGHHHHH--HHHTTHHHHHHHCCHHHHHHHHH---HHHHTSSC
T ss_pred HHHCCCCCcCCChhhCCCCCCHHHHHHHHHHHHhhCCchHHHHH--HhhHHHHHHHHhCCHHHHHHHHH---HHhCCCeE
Confidence 468999999999999999999999999999999999 8887755 43356788999999999999999 99999999
Q ss_pred EEEEecCCCCCCCcccCccccceeeeeCCCeEEEeeeEEEeeCCCCCCeEEEEeec
Q psy1218 80 GVVESSEVCRGYNNFEKHYQHRTRCPLGPKGCASCGVIMSVNNSLYLGPILKFGNA 135 (136)
Q Consensus 80 ~~~a~tEp~~Gsd~~~~~~~~~t~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~ 135 (136)
+++++|||++|||+..+. |++++++|||+|||+|.||||+.+||+++|+|+.
T Consensus 125 ~~~a~tEp~~Gsd~~~~~----t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~ 176 (385)
T 2pg0_A 125 TAIAMTEPGAGSDLANIS----TTAVKDGDYYIVNGQKTFITNGIHADLIVVACKT 176 (385)
T ss_dssp EEEECCBTTBSSCGGGCC----CEEEEETTEEEEEEEEEEETTTTTCSEEEEEEES
T ss_pred EEEEeCCCCCCcCHhhCe----EEEEEcCCEEEEEeEEecccCCcccCEEEEEEEe
Confidence 999999999999998875 7899999999999999999999999999999975
No 19
>3sf6_A Glutaryl-COA dehydrogenase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: FDA; 1.70A {Mycobacterium smegmatis}
Probab=99.97 E-value=4.3e-31 Score=204.25 Aligned_cols=127 Identities=20% Similarity=0.269 Sum_probs=118.7
Q ss_pred CcccCCCcCCCCCCCCCCCCCHHHHHHHHHHHHhcCCchhHHHHHhhhhhHHHHhcCCCHHHHHhhcCCcccccccCeeE
Q psy1218 1 MGELGLMGVEVPEDLGGTGLDYLAYAIATEEISRGCASCGVIMSVNNSLYLGPLLKFDFRPMLLKLVFHGTLVCHEVVLG 80 (136)
Q Consensus 1 l~~~G~~~l~vP~~~GG~g~~~~~~~~~~e~la~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~~~~g~~~~ 80 (136)
|++.||+++.+ ++|||.|+++.+++.+.||+++.|+++++++.+|.......|..+++++||++|+| ++++|+.++
T Consensus 71 l~~~Gl~~l~~-~e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~---~~~~G~~~~ 146 (403)
T 3sf6_A 71 LGELGLLGMHL-KGYGCAGMSAVAYGLACLELEAGDSGIRSLVSVQGSLAMYAIHAFGSDEQKDQWLP---DMASGHRIG 146 (403)
T ss_dssp HHHTTCSSTTS-CSTTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHH---HHHTTSSCE
T ss_pred HHHCCCCcccc-hhhCCCCCCHHHHHHHHHHHHHhcccHHHHHHHhhhhHHHHHHHhCCHHHHHHHHH---HHhCCCceE
Confidence 46899999999 99999999999999999999999999888887775456788999999999999999 999999999
Q ss_pred EEEecCCCCCCCcccCccccceeeeeCCCeEEEeeeEEEeeCCCCCCeEEEEeec
Q psy1218 81 VVESSEVCRGYNNFEKHYQHRTRCPLGPKGCASCGVIMSVNNSLYLGPILKFGNA 135 (136)
Q Consensus 81 ~~a~tEp~~Gsd~~~~~~~~~t~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~ 135 (136)
++++|||++|||+.++. |++++++|||+|||+|.||||+.+||+++|+|+.
T Consensus 147 ~~a~tEp~~Gsd~~~~~----t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~ar~ 197 (403)
T 3sf6_A 147 CFGLTEPDHGSDPAGMR----TRATRSGDDWILTGTKMWITNGSVADVAVVWART 197 (403)
T ss_dssp EEECCBTTBSSCGGGCC----CEEEEETTEEEEEEEEEEEETGGGCSEEEEEEEE
T ss_pred EEEEccCCCCCCchhcE----EEEEEECCEEEEEEEEEeecCCcccCEEEEEEEe
Confidence 99999999999998875 8999999999999999999999999999999975
No 20
>3swo_A Glutaryl-COA dehydrogenase; ssgcid, glutaryl-COA dehdrogenase, mycobacerium smegmatis, S genomics; HET: FDA; 1.45A {Mycobacterium smegmatis}
Probab=99.97 E-value=8.5e-31 Score=202.25 Aligned_cols=127 Identities=18% Similarity=0.239 Sum_probs=118.6
Q ss_pred CcccCCCcCCCCCCCCCCCCCHHHHHHHHHHHHhcCCchhHHHHHhhhhhHHHHhcCCCHHHHHhhcCCcccccccCeeE
Q psy1218 1 MGELGLMGVEVPEDLGGTGLDYLAYAIATEEISRGCASCGVIMSVNNSLYLGPLLKFDFRPMLLKLVFHGTLVCHEVVLG 80 (136)
Q Consensus 1 l~~~G~~~l~vP~~~GG~g~~~~~~~~~~e~la~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~~~~g~~~~ 80 (136)
|++.||+++.+ ++|||.|+++.+++.+.||+++.|+++++++.+|.......|..+++++||++|+| ++++|+.++
T Consensus 66 l~~~Gl~~l~~-~e~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~---~~~~G~~~~ 141 (399)
T 3swo_A 66 FGNLGVLGMHL-QGYGCAGTNAVSYGLACMELEAGDSGFRSFVSVQGSLSMFSIYRYGSEEQKNEWLP---RLAAGDAIG 141 (399)
T ss_dssp HHHHTCTTTTS-CSTTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHTTTHHHHHHHHCCHHHHHHHHH---HHHHTSSCE
T ss_pred HHHCCCCcCCh-hhhCCCCCCHHHHHHHHHHHHHhCccHHHHHHHHhhhhhhHHHhcCCHHHHHHHHH---HHhCCCeee
Confidence 46899999999 99999999999999999999999999888777775466788999999999999999 999999999
Q ss_pred EEEecCCCCCCCcccCccccceeeeeCCCeEEEeeeEEEeeCCCCCCeEEEEeec
Q psy1218 81 VVESSEVCRGYNNFEKHYQHRTRCPLGPKGCASCGVIMSVNNSLYLGPILKFGNA 135 (136)
Q Consensus 81 ~~a~tEp~~Gsd~~~~~~~~~t~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~ 135 (136)
++++|||++|||+.++. |++++++|||+|||+|.||||+.+||+++|+|+.
T Consensus 142 ~~a~tEp~~Gsd~~~~~----t~A~~~~~g~~lnG~K~~vs~a~~Ad~~~v~a~~ 192 (399)
T 3swo_A 142 CFGLTEPDFGSNPAGMR----TRARRDGSDWILNGTKMWITNGNLADVATVWAQT 192 (399)
T ss_dssp EEECCBTTBSSCGGGCC----CEEEEETTEEEEEEEEEEEETTTTCSEEEEEEBC
T ss_pred EEEecCCCCCCCCccce----EEEEEeCCEEEEEEEEEeECCCCccCEEEEEEEe
Confidence 99999999999998875 8999999999999999999999999999999975
No 21
>3mpi_A Glutaryl-COA dehydrogenase; alpha-beta fold, oxidoreductase; HET: FAD GRA; 2.05A {Desulfococcus multivorans} PDB: 3mpj_A*
Probab=99.97 E-value=4e-31 Score=203.79 Aligned_cols=127 Identities=24% Similarity=0.348 Sum_probs=118.5
Q ss_pred CcccCCCcCCCCCCCCCCCC--CHHHHHHHHHHHHhcCCchhHHHHHhhhhhHH-HHhcCCCHHHHHhhcCCcccccccC
Q psy1218 1 MGELGLMGVEVPEDLGGTGL--DYLAYAIATEEISRGCASCGVIMSVNNSLYLG-PLLKFDFRPMLLKLVFHGTLVCHEV 77 (136)
Q Consensus 1 l~~~G~~~l~vP~~~GG~g~--~~~~~~~~~e~la~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~~l~~~~~~~~g~ 77 (136)
|+++||+++.+|++|||.|+ ++.+++.+.|++++.|+++++.+.+|. .... .|..+++++|+++|+| ++++|+
T Consensus 46 l~~~Gl~~l~~P~~~GG~g~~~~~~~~~~v~eela~~~~~~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~---~~~~g~ 121 (397)
T 3mpi_A 46 MGELGFFGTVIPEEYGGEGMDQGWLAAMIVTEEIARGSSALRVQLNMEV-LGCAYTILTYGSEALKKKYVP---KLSSAE 121 (397)
T ss_dssp HHHTTTTCTTSCGGGTSCCCTTHHHHHHHHHHHHHHHCHHHHHHHHHHT-TTTHHHHHHHSCHHHHHHHHH---HHHTTS
T ss_pred HHHCCCCccCCChhhCCCCCCCCHHHHHHHHHHHHhhCchHHHHHHHHH-HhHHHHHHHhCCHHHHHHHHH---HHhCCC
Confidence 46899999999999999999 999999999999999999998888775 4555 8999999999999999 999999
Q ss_pred eeEEEEecCCCCCCCcccCccccceeeeeCCCeEEEeeeEEEeeCCCCCCeEEEEeec
Q psy1218 78 VLGVVESSEVCRGYNNFEKHYQHRTRCPLGPKGCASCGVIMSVNNSLYLGPILKFGNA 135 (136)
Q Consensus 78 ~~~~~a~tEp~~Gsd~~~~~~~~~t~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~ 135 (136)
.++++++|||++|||+..+. |++++++|||+|||+|.|+||+.+||+++|+|+.
T Consensus 122 ~~~~~a~tEp~~gsd~~~~~----t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~ 175 (397)
T 3mpi_A 122 FLGGFGITEPDAGSDVMAMS----STAEDKGDHWLLNGSKTWISNAAQADVLIYYAYT 175 (397)
T ss_dssp SCCCEECCBTTBSSCGGGCC----CEEEECSSEEEEEEEEEEEETTTTCSSEEEEEES
T ss_pred eEEEEEecCCCCCCCcccCe----EEEEEeCCEEEEEEEEEeeCCCcccCEEEEEEEc
Confidence 99999999999999998875 7999999999999999999999999999999975
No 22
>4hr3_A Putative acyl-COA dehydrogenase; ssgcid, seattle structural genomics center for infectious DI niaid; HET: FAD; 1.80A {Mycobacterium abscessus}
Probab=99.97 E-value=1.4e-30 Score=201.83 Aligned_cols=127 Identities=13% Similarity=0.036 Sum_probs=111.2
Q ss_pred cccCCCcCCCCCCCCCCCCCHHHHHHHHHHHHhcCCchhHHHH-HhhhhhHHHHhcCCCHHHHHhhcCCcccccccCeeE
Q psy1218 2 GELGLMGVEVPEDLGGTGLDYLAYAIATEEISRGCASCGVIMS-VNNSLYLGPLLKFDFRPMLLKLVFHGTLVCHEVVLG 80 (136)
Q Consensus 2 ~~~G~~~l~vP~~~GG~g~~~~~~~~~~e~la~~~~~~~~~~~-~~~~~~~~~l~~~g~~~~~~~~l~~~~~~~~g~~~~ 80 (136)
+++||+++.+|++|||.|+++.+++.++|++++.|.+..++.. .+.......|..+++++||++|+| ++++|+.++
T Consensus 68 ~e~G~~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~---~~~~G~~~~ 144 (415)
T 4hr3_A 68 RAAGLWNLFLPDPELGGGLSNSEYAPLAEQMGRSLFAPTVFNCNAPDSGNMEVLHRYGSQEQKEVWLE---PLLEGDIRS 144 (415)
T ss_dssp HHTTCSSTTCCCTTTSCCCCHHHHHHHHHHHTTCSSHHHHTTCCTTHHHHHHHHHHHCCHHHHHHTHH---HHHTTSCEE
T ss_pred HhCCCcCcCCCHHHCCCCCCHHHHHHHHHHHhcccchHHHHHHhccccchHHHHHHhCCHHHHHHHHH---HHhCCCcee
Confidence 5899999999999999999999999999999998754433221 121123467899999999999999 999999999
Q ss_pred EEEecCCC-CCCCcccCccccceeeeeCCCeEEEeeeEEEeeCCCC--CCeEEEEeec
Q psy1218 81 VVESSEVC-RGYNNFEKHYQHRTRCPLGPKGCASCGVIMSVNNSLY--LGPILKFGNA 135 (136)
Q Consensus 81 ~~a~tEp~-~Gsd~~~~~~~~~t~a~~~~~g~~l~G~k~~vs~~~~--a~~~lv~a~~ 135 (136)
|+++|||+ +|||+..+. |++++++|||+|||+|.||||+.+ ||+++|+|+.
T Consensus 145 ~~a~tEp~~~gsd~~~~~----t~A~~~g~g~~lnG~K~~is~a~~~~Ad~~~v~a~~ 198 (415)
T 4hr3_A 145 AFCMTEPDVASSDATNMA----ATAVVEGDEVVINGRKWWSTGVGHPDCKVIIFMGLT 198 (415)
T ss_dssp EEECCCTTSCTTSGGGCC----CEEEEETTEEEEEEEEEEEETTTSTTEEEEEEEEEC
T ss_pred EEEEcCCCCCCCchhhCe----eEEEEECCEEEEeeEEeeECCCCCCCCCEEEEEEEe
Confidence 99999999 999998875 899999999999999999999977 9999999985
No 23
>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus}
Probab=99.97 E-value=2.6e-30 Score=207.96 Aligned_cols=127 Identities=24% Similarity=0.316 Sum_probs=115.5
Q ss_pred CcccCCCcCCCCCCCCCCCCCHHHHHHHHHHHHhcCCchhHHHHHhhhhhHHHHhcCCCHHHHHhhcCCcccccccCeeE
Q psy1218 1 MGELGLMGVEVPEDLGGTGLDYLAYAIATEEISRGCASCGVIMSVNNSLYLGPLLKFDFRPMLLKLVFHGTLVCHEVVLG 80 (136)
Q Consensus 1 l~~~G~~~l~vP~~~GG~g~~~~~~~~~~e~la~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~~~~g~~~~ 80 (136)
|+++||+++.+|++|||.|+++.+++.+.|++ +.|+++++.+..|+.....+|..+|+++||++|+| ++++|+.++
T Consensus 69 l~e~Gl~~l~vPee~GG~g~~~~~~~~v~eel-~~~~s~~~~~~~~~~~~~~~l~~~Gt~eQk~~~Lp---~l~~G~~~~ 144 (577)
T 2z1q_A 69 AGELGLLAIDVPEEYGGLDLPKVISTVVAEEL-SGSGGFSVTYGAHTSIGTLPLVYFGTEEQKRKYLP---KLASGEWIA 144 (577)
T ss_dssp HHHTTTTSTTSCGGGTCCCCCHHHHHHHHHHH-TTSCTHHHHHHHHHTTTTHHHHHHCCHHHHHTTHH---HHHHTSSCE
T ss_pred HHHCCCCCcCCChhhCCCCCCHHHHHHHHHHH-hhcccHHHHHhhhHHHHHHHHHHhCCHHHHHHHHH---HHhCCCeEE
Confidence 46899999999999999999999999999999 77889888888775455678999999999999999 999999999
Q ss_pred EEEecCCCCCCCcccCccccceeeee--CCCeEEEeeeEEEeeCCCCCCeEEEEeec
Q psy1218 81 VVESSEVCRGYNNFEKHYQHRTRCPL--GPKGCASCGVIMSVNNSLYLGPILKFGNA 135 (136)
Q Consensus 81 ~~a~tEp~~Gsd~~~~~~~~~t~a~~--~~~g~~l~G~k~~vs~~~~a~~~lv~a~~ 135 (136)
|+++|||++|||+..+. |+|++ ++++|+|||+|.||||++.||+++|+|++
T Consensus 145 a~alTEp~aGSD~~~~~----t~A~~~~dG~~~vLnG~K~~it~a~~Ad~~~V~Ar~ 197 (577)
T 2z1q_A 145 AYCLTEPGSGSDALAAK----TRATLSEDGKHYILNGVKQWISNAGFAHLFTVFAKV 197 (577)
T ss_dssp EEECCBTTBSSSGGGCC----CEEEECTTSSEEEEEEEEEEEETTTTCSEEEEEEEE
T ss_pred EEEecCCCCCCCcccCe----eEEEEeCCCCEEEEEEEeeCCCCCCccCEEEEEEEe
Confidence 99999999999998875 78877 45579999999999999999999999985
No 24
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis}
Probab=99.96 E-value=5.5e-30 Score=206.73 Aligned_cols=127 Identities=24% Similarity=0.337 Sum_probs=111.9
Q ss_pred CcccCCCcCCCCCCCCCCCCCHHHHHHHHHHHHhcCCchhHHHHHhhhhhHHHHhcCCCHHHHHhhcCCcccccccCeeE
Q psy1218 1 MGELGLMGVEVPEDLGGTGLDYLAYAIATEEISRGCASCGVIMSVNNSLYLGPLLKFDFRPMLLKLVFHGTLVCHEVVLG 80 (136)
Q Consensus 1 l~~~G~~~l~vP~~~GG~g~~~~~~~~~~e~la~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~~~~g~~~~ 80 (136)
|+++||+++.+|++|||.|+++.+++.+.|++++.+ +.+..+..|......+|..+++++||++|+| ++++|++++
T Consensus 74 l~e~Gl~gl~vPee~GG~G~~~~~~~~v~Eel~~~~-~~~~~~~~~~~~~~~~l~~~Gt~eQk~~~Lp---~la~Ge~~~ 149 (597)
T 3owa_A 74 AGELGLLGADVPEEYGGIGLDKVSSALIAEKFSRAG-GFAITHGAHVGIGSLPIVLFGNEEQKKKYLP---LLATGEKLA 149 (597)
T ss_dssp HHHTTTTCTTSCGGGTCCCCCHHHHHHHHHHHGGGT-HHHHHHHHHHTTTTHHHHHHCCHHHHHHHHH---HHHHTSSCE
T ss_pred HHHCCCCcCCCChhhCCCCCCHHHHHHHHHHHHccc-hHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH---HHhCCCcce
Confidence 358999999999999999999999999999999986 4444445554355667889999999999999 999999999
Q ss_pred EEEecCCCCCCCcccCccccceeeeeC--CCeEEEeeeEEEeeCCCCCCeEEEEeec
Q psy1218 81 VVESSEVCRGYNNFEKHYQHRTRCPLG--PKGCASCGVIMSVNNSLYLGPILKFGNA 135 (136)
Q Consensus 81 ~~a~tEp~~Gsd~~~~~~~~~t~a~~~--~~g~~l~G~k~~vs~~~~a~~~lv~a~~ 135 (136)
++++|||++|||+.++. |+|+++ +++|+|||+|.||||+.+||+++|+|+.
T Consensus 150 a~alTEp~aGSD~~~~~----T~A~~~~dG~~yvLnG~K~~is~a~~Ad~~lV~Art 202 (597)
T 3owa_A 150 AYALTEPGSGSDALGAK----TTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKI 202 (597)
T ss_dssp EEECCBTTBSSSGGGCC----CEEEECTTSSEEEEEEEEEEEETTTTCSEEEEEEEE
T ss_pred eeEecCCCCCCCcccce----eEEEEeCCCCEEEEeeEEEEeCCCccCCEEEEEEEe
Confidence 99999999999998875 788874 4569999999999999999999999985
No 25
>2c12_A Nitroalkane oxidase; oxidoreductase, flavoenzyme, acyl-COA dehydrogenase, long cell EDGE, FAD, inhibitor, flavoprotein; HET: SPM FAD PE4; 2.07A {Fusarium oxysporum} SCOP: a.29.3.1 e.6.1.1 PDB: 2c0u_A* 2zaf_A* 2reh_A* 3d9g_A* 3d9f_A* 3d9d_A* 3d9e_A* 3fcj_A*
Probab=99.96 E-value=1.5e-29 Score=197.29 Aligned_cols=127 Identities=19% Similarity=0.067 Sum_probs=115.3
Q ss_pred CcccCCCcCCCCCCCCCCCCCHHHHHHHHHHHHhcCCchhHHHHHhhhhhHHHHhcCCCHHHHHhhcCCccccc--ccCe
Q psy1218 1 MGELGLMGVEVPEDLGGTGLDYLAYAIATEEISRGCASCGVIMSVNNSLYLGPLLKFDFRPMLLKLVFHGTLVC--HEVV 78 (136)
Q Consensus 1 l~~~G~~~l~vP~~~GG~g~~~~~~~~~~e~la~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~~~--~g~~ 78 (136)
|+++||+++.+|++|||.|+++.+++.+.|++++.|+++++.+.+|. .....|..+++++||++|+| +++ +|+.
T Consensus 52 l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~---~~~~~~G~~ 127 (439)
T 2c12_A 52 AVRHGLIKAQVPIPLGGTMESLVHESIILEELFAVEPATSITIVATA-LGLMPVILCDSPSLQEKFLK---PFISGEGEP 127 (439)
T ss_dssp HHHTTTTGGGSBGGGTCCBCCHHHHHHHHHHHHTTCCTTHHHHHHHH-HHHHHHHHSSCHHHHHHHTG---GGGSSCSCC
T ss_pred HHHCCCCCCCCChhhCCCCCCHHHHHHHHHHHHhhChHHHHHHHHhH-HHHHHHHHhCCHHHHHHHHH---HHhhcCCCE
Confidence 46899999999999999999999999999999999999998777764 56678899999999999999 999 6999
Q ss_pred eEEEEecCCCCCCC-----cccCccccceeeeeCCCeEEEeeeEEEeeCCC-----CCCeEEEEeec
Q psy1218 79 LGVVESSEVCRGYN-----NFEKHYQHRTRCPLGPKGCASCGVIMSVNNSL-----YLGPILKFGNA 135 (136)
Q Consensus 79 ~~~~a~tEp~~Gsd-----~~~~~~~~~t~a~~~~~g~~l~G~k~~vs~~~-----~a~~~lv~a~~ 135 (136)
++|+++|||++||| +..+. |++++++|||+|||+|.||||+. +||+++|+|+.
T Consensus 128 ~~~~a~tEp~~Gs~~~~sd~~~~~----t~A~~~~~g~~lnG~K~~is~~~~~~~~~Ad~~~v~ar~ 190 (439)
T 2c12_A 128 LASLMHSEPNGTANWLQKGGPGLQ----TTARKVGNEWVISGEKLWPSNSGGWDYKGADLACVVCRV 190 (439)
T ss_dssp CEEEECCCTTCSTTTTCTTSCCCS----CEEEEETTEEEEEEEEECCTTTTTTTSSCCSEEEEEEEE
T ss_pred EEEEEecCCCCCCCccccccccce----eEEEEcCCEEEEEeEEEeecCCCccccccCcEEEEEEEc
Confidence 99999999999984 55553 78999999999999999999997 89999999975
No 26
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A*
Probab=99.96 E-value=6.8e-30 Score=206.52 Aligned_cols=128 Identities=20% Similarity=0.242 Sum_probs=116.8
Q ss_pred CcccCCCcCCCCCCCCCCCCCHHHHHHHHHHHHhcCCchhHHHHHhhhhhHHHHhcCCCHHHHHhhcCCcccccccCeeE
Q psy1218 1 MGELGLMGVEVPEDLGGTGLDYLAYAIATEEISRGCASCGVIMSVNNSLYLGPLLKFDFRPMLLKLVFHGTLVCHEVVLG 80 (136)
Q Consensus 1 l~~~G~~~l~vP~~~GG~g~~~~~~~~~~e~la~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~~~~g~~~~ 80 (136)
|++.||+++.+|++|||.|++..+.+.+.|++++.|+++++.+..|.......|..+++++||++|+| ++++|++++
T Consensus 88 l~e~Gl~~l~~P~e~GG~gl~~~~~~~v~e~l~~~~~s~a~~~~~~~~~g~~~l~~~Gt~eqk~~~Lp---~l~~G~~~~ 164 (607)
T 2uxw_A 88 LKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDLGVGITLGAHQSIGFKGILLFGTKAQKEKYLP---KLASGETVA 164 (607)
T ss_dssp HHHTTTTCTTSCGGGTSCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHTTTTHHHHHHCCHHHHHHHHH---HHHTTSSCE
T ss_pred HHHcCCcCCCCChhhCCCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH---HHhCCCeEE
Confidence 46899999999999999999999999999999999999988887765344688999999999999999 999999999
Q ss_pred EEEecCCCCCCCcccCccccceeeeeC--CCeEEEeeeEEEeeCCCCCCeEEEEeec
Q psy1218 81 VVESSEVCRGYNNFEKHYQHRTRCPLG--PKGCASCGVIMSVNNSLYLGPILKFGNA 135 (136)
Q Consensus 81 ~~a~tEp~~Gsd~~~~~~~~~t~a~~~--~~g~~l~G~k~~vs~~~~a~~~lv~a~~ 135 (136)
|+++|||++|||+..+. |+|+++ +++|+|||+|.||||+..||+++|+|++
T Consensus 165 ~~alTEp~aGSD~~~~~----t~A~~~~dG~~y~LnG~K~~is~~~~Ad~~lV~Ar~ 217 (607)
T 2uxw_A 165 AFCLTEPSSGSDAASIR----TSAVPSPCGKYYTLNGSKLWISNGGLADIFTVFAKT 217 (607)
T ss_dssp EEECCBTTBSSCGGGCC----CEEEECTTSSEEEEEEEEEEEETTTTCSEEEEEEEE
T ss_pred EEEecCCCCCCCcccce----eEEEEeCCCCEEEEEeEEEeecCCcccCEEEEEEEe
Confidence 99999999999998875 788876 3479999999999999999999999975
No 27
>1siq_A GCD, glutaryl-COA dehydrogenase; acyl-COA dehydrogenase, decarboxylation, flavin protein, oxidoreductase; HET: FAD; 2.10A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 2r0n_A* 1sir_A* 2r0m_A*
Probab=99.96 E-value=7.7e-30 Score=196.42 Aligned_cols=127 Identities=23% Similarity=0.327 Sum_probs=116.4
Q ss_pred CcccCCCcCCCCCCCCCCCCCHHHHHHHHHHHHhcCCchhHHHHHhhhhhHHHHhcCCCHHHHHhhcCCcccccccCeeE
Q psy1218 1 MGELGLMGVEVPEDLGGTGLDYLAYAIATEEISRGCASCGVIMSVNNSLYLGPLLKFDFRPMLLKLVFHGTLVCHEVVLG 80 (136)
Q Consensus 1 l~~~G~~~l~vP~~~GG~g~~~~~~~~~~e~la~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~~~~g~~~~ 80 (136)
|+++||+++.+ ++|||.|+++.+++.+.|++++.|+++++.+.++..+....|..+++++||++|+| ++++|+.++
T Consensus 54 l~~~Gl~~l~~-~~~GG~g~~~~~~~~~~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~---~l~~g~~~~ 129 (392)
T 1siq_A 54 MGELGVLGPTI-KGYGCAGVSSVAYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLP---QLAKGELLG 129 (392)
T ss_dssp HHHTTCSSTTC-EETTEECCCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTHHHHHHHSCHHHHHHHHH---HHHTTSSCE
T ss_pred HHhCCCCcccH-HhhCCCCCCHHHHHHHHHHHHHhCcHHHHHHHHHHhHHHHHHHHhCCHHHHHHHHH---HHhCCCeEE
Confidence 46899999999 99999999999999999999999998887666654356778889999999999999 999999999
Q ss_pred EEEecCCCCCCCcccCccccceeeeeC--CCeEEEeeeEEEeeCCCCCCeEEEEeec
Q psy1218 81 VVESSEVCRGYNNFEKHYQHRTRCPLG--PKGCASCGVIMSVNNSLYLGPILKFGNA 135 (136)
Q Consensus 81 ~~a~tEp~~Gsd~~~~~~~~~t~a~~~--~~g~~l~G~k~~vs~~~~a~~~lv~a~~ 135 (136)
++++|||++|||+..+. |+++++ +|+|+|||+|.||||+.+||+++|+|+.
T Consensus 130 ~~a~tEp~~gsd~~~~~----t~A~~~~~~~g~~lnG~K~~vs~~~~Ad~~~v~a~~ 182 (392)
T 1siq_A 130 CFGLTEPNSGSDPSSME----TRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARC 182 (392)
T ss_dssp EEECCBTTBSSCGGGCC----CEEEEETTTTEEEEEEEEEEEETGGGCSEEEEEEEE
T ss_pred EEEECCCCCCcCccccE----EEEEEeCCCCEEEEEEEEEeecCCcccCEEEEEEEE
Confidence 99999999999998875 789998 9999999999999999999999999975
No 28
>3mkh_A Nitroalkane oxidase; oxidoreductase flavoenzyme, acyl-COA dehydrogen flavoprotein, oxidoreductase; HET: FAD; 2.00A {Podospora anserina}
Probab=99.96 E-value=3.5e-29 Score=195.14 Aligned_cols=126 Identities=17% Similarity=0.016 Sum_probs=112.9
Q ss_pred CcccCCCcCCCCCCCCCCCCCHHHHHHHHHHHHhcCCchhHHHHHhhhhhHHHHhcCCCHHHHHhhcCCccccccc--Ce
Q psy1218 1 MGELGLMGVEVPEDLGGTGLDYLAYAIATEEISRGCASCGVIMSVNNSLYLGPLLKFDFRPMLLKLVFHGTLVCHE--VV 78 (136)
Q Consensus 1 l~~~G~~~l~vP~~~GG~g~~~~~~~~~~e~la~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~~~~g--~~ 78 (136)
|+++||+++.+|++|||.|+++.+++.++||+++.|+++++.+..+. +....|..+++++ |++|+| ++++| +.
T Consensus 54 l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~-~~~~~l~~~g~~~-~~~~l~---~~~~G~g~~ 128 (438)
T 3mkh_A 54 AVSAGILKGQISPAHGGTGGTLIESAILVEECYSVEPSAALTIFATG-LGLTPINLAAGPQ-HAEFLA---PFLSGEGSP 128 (438)
T ss_dssp HHHTTTTGGGSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHH-HHHHHHHHHCCGG-GHHHHG---GGSSSCSCC
T ss_pred HHhCCCCCCCCCcccCCCCCCHHHHHHHHHHHHhhChhHHHHHHHhh-HHHHHHHhhCCHH-HHHHHH---HHhcCCCCc
Confidence 46899999999999999999999999999999999999887766654 5667788899999 899999 99986 58
Q ss_pred eEEEEecCCCCCC-----CcccCccccceeeeeCCCeEEEeeeEEEeeCCC-----CCCeEEEEeec
Q psy1218 79 LGVVESSEVCRGY-----NNFEKHYQHRTRCPLGPKGCASCGVIMSVNNSL-----YLGPILKFGNA 135 (136)
Q Consensus 79 ~~~~a~tEp~~Gs-----d~~~~~~~~~t~a~~~~~g~~l~G~k~~vs~~~-----~a~~~lv~a~~ 135 (136)
++|+++|||++|| |+.++. |+|++++|+|+|||+|.||||+. +||+++|+|++
T Consensus 129 ~~~~a~tEp~~gs~~~~sd~~~~~----t~A~~~g~g~~lnG~K~~is~a~~~~~~~Ad~~~v~a~~ 191 (438)
T 3mkh_A 129 LASLVFSEPGGVANALEKGAPGFQ----TTARLEGDEWVINGEKMWATNCAGWDFKGCDLACVVCRD 191 (438)
T ss_dssp CEEEECCCTTCCTTTTCTTSCCCS----CEEEEETTEEEEEEEECSCTTTTCTTSSCCSEEEEEEEE
T ss_pred eEEEEEccCCCCCCccccccccce----eEEEEeCCEEEEEeEEEEecCCCccccccCcEEEEEEEe
Confidence 9999999999998 566664 89999999999999999999998 89999999975
No 29
>2wbi_A Acyl-COA dehydrogenase family member 11; human, phosphoprotein, oxidoreducta; HET: FAD; 2.80A {Homo sapiens}
Probab=99.94 E-value=1.5e-27 Score=185.75 Aligned_cols=124 Identities=10% Similarity=0.013 Sum_probs=107.2
Q ss_pred cccCCCcCCCCCCCCCCCCCHHHHHHHHHHHHhcCCc-hhHHHHHhhhhhHHHHhcCCCHHHHHhhcCCcccccccCeeE
Q psy1218 2 GELGLMGVEVPEDLGGTGLDYLAYAIATEEISRGCAS-CGVIMSVNNSLYLGPLLKFDFRPMLLKLVFHGTLVCHEVVLG 80 (136)
Q Consensus 2 ~~~G~~~l~vP~~~GG~g~~~~~~~~~~e~la~~~~~-~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~~~~g~~~~ 80 (136)
+++||+++.+|+ |.|+++.+++.+.|++++.|.+ .++....+.......|..+++++||++|+| ++++|+.++
T Consensus 77 ~~~Gl~~l~~P~---G~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~qk~~~l~---~l~~G~~~~ 150 (428)
T 2wbi_A 77 KVEGLWNLFLPA---VSGLSHVDYALIAEETGKCFFAPDVFNCQAPDTGNMEVLHLYGSEEQKKQWLE---PLLQGNITS 150 (428)
T ss_dssp HHTTCCSTTCHH---HHCCCHHHHHHHHHHHTTSTTHHHHTTCCTTHHHHHHHHHHHCCHHHHHHTHH---HHHHTSSEE
T ss_pred HHCCCCeecCCC---CCCCCHHHHHHHHHHHHhhcchhhhHhhhccchhHHHHHHHhCCHHHHHHHHH---HHhCCCeEE
Confidence 579999999999 8899999999999999998743 222222221235667888999999999999 999999999
Q ss_pred EEEecCCC-CCCCcccCccccceeeeeCCCeEEEeeeEEEeeCCCC--CCeEEEEeec
Q psy1218 81 VVESSEVC-RGYNNFEKHYQHRTRCPLGPKGCASCGVIMSVNNSLY--LGPILKFGNA 135 (136)
Q Consensus 81 ~~a~tEp~-~Gsd~~~~~~~~~t~a~~~~~g~~l~G~k~~vs~~~~--a~~~lv~a~~ 135 (136)
|+++|||+ +|||+.++. |++++++|||+|||+|.||||+.+ ||+++|+|+.
T Consensus 151 ~~a~tEp~~aGsd~~~~~----t~A~~~~~g~~lnG~K~~is~a~~~~Ad~~~v~art 204 (428)
T 2wbi_A 151 CFCMTEPDVASSDATNIE----CSIQRDEDSYVINGKKWWSSGAGNPKCKIAIVLGRT 204 (428)
T ss_dssp EEECCCTTSCTTSGGGCC----CEEEEETTEEEEEEEEEEEETTTSTTEEEEEEEEEC
T ss_pred EEEEecCCcCCCCcccce----EEEEEeCCEEEEEeEEeccCCCCCCcCCEEEEEEEe
Confidence 99999999 999998875 789999999999999999999988 9999999985
No 30
>3mxl_A Nitrososynthase; flavin monooxygenase, acyl-COA dehydrogenas oxidoreductase; 3.15A {Micromonospora carbonacea}
Probab=99.94 E-value=7.7e-27 Score=179.42 Aligned_cols=123 Identities=21% Similarity=0.182 Sum_probs=105.1
Q ss_pred CcccCCCcCCCCCCCCCCC-CCHHHHHHHHHHHHhcCCchhHHHHHhhhhhHHHH--hcCCCHHHH---HhhcCCccccc
Q psy1218 1 MGELGLMGVEVPEDLGGTG-LDYLAYAIATEEISRGCASCGVIMSVNNSLYLGPL--LKFDFRPML---LKLVFHGTLVC 74 (136)
Q Consensus 1 l~~~G~~~l~vP~~~GG~g-~~~~~~~~~~e~la~~~~~~~~~~~~~~~~~~~~l--~~~g~~~~~---~~~l~~~~~~~ 74 (136)
|++.||+++.+|++|||.| .++.+++.+.|++++.|+++++.+.+|.......+ ..+++++|| ++|+| ++.
T Consensus 48 l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~~eel~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~qk~~~~~~l~---~~~ 124 (395)
T 3mxl_A 48 FAKLGLMGATVPAELGGLGLTRLYDVATALMRLAEADASTALAWHVQLSRGLTLTYEWQHGTPPVRAMAERLLR---AMA 124 (395)
T ss_dssp HHHHTGGGCSSCTTTTSCCCCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHH---HHH
T ss_pred HHHCCCcCcCCChhhCCCCCcCHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHhhcCCHHHHhHHHHHHH---HHh
Confidence 4688999999999999999 99999999999999999999988877643333333 367999999 99999 999
Q ss_pred ccCeeEEEEecCCCCCCCcccCccccceeeeeCCCeEEEeeeEEEeeCCCCCCeEEEEeec
Q psy1218 75 HEVVLGVVESSEVCRGYNNFEKHYQHRTRCPLGPKGCASCGVIMSVNNSLYLGPILKFGNA 135 (136)
Q Consensus 75 ~g~~~~~~a~tEp~~Gsd~~~~~~~~~t~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~ 135 (136)
+|+.+.++++|||++|+ ..+. ++++|||+|||+|.||||+.+||+++|+|+.
T Consensus 125 ~g~~~~~~a~tEp~~~~--~~~~-------t~~~~g~~lnG~K~~is~a~~Ad~~~v~a~~ 176 (395)
T 3mxl_A 125 EGEAAVCGALKDAPGVV--TELH-------SDGAGGWLLSGRKVLVSMAPIATHFFVHAQR 176 (395)
T ss_dssp HTSCCEECCCSBCTTCC--CEEE-------ECSSSCEEEEEEEEEETTGGGCSEECCCEEE
T ss_pred cCCcEEEEEecCCCCCC--CceE-------EecCCEEEEeeEEEEecCccccCEEEEEEEe
Confidence 99999999999998652 2221 2378899999999999999999999999874
No 31
>3m9v_A FAD-dependent oxidoreductase; KIJD3, fatty acyl-COA dehydrogenase family, kijanose, kijani FAD, flavoprotein; HET: TYD; 2.05A {Actinomadura kijaniata}
Probab=99.93 E-value=1.8e-26 Score=179.88 Aligned_cols=123 Identities=18% Similarity=0.119 Sum_probs=105.1
Q ss_pred CcccCCCcCCCCCCCCCCC-CCHHHHHHHHHHHHhcCCchhHHHHHhhhhhHHH--HhcCCCHHH---HHhhcCCccccc
Q psy1218 1 MGELGLMGVEVPEDLGGTG-LDYLAYAIATEEISRGCASCGVIMSVNNSLYLGP--LLKFDFRPM---LLKLVFHGTLVC 74 (136)
Q Consensus 1 l~~~G~~~l~vP~~~GG~g-~~~~~~~~~~e~la~~~~~~~~~~~~~~~~~~~~--l~~~g~~~~---~~~~l~~~~~~~ 74 (136)
|++.||+++.+|++|||.| .++.+++.+.||+++.|.++++.+.+|....... +..+++++| |++|++ +++
T Consensus 59 l~~~Gl~~l~~P~~~GG~gl~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~q~~~k~~~l~---~l~ 135 (439)
T 3m9v_A 59 LRKDGLMGATVPAELGGLGVDRLYDVAVALLAVARADASTALALHMQLSRGLTLGYEWRHGDERARTLAERILR---GMV 135 (439)
T ss_dssp HHHTTGGGTTSCGGGTSCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHH---HHH
T ss_pred HHHCCCccCCCChhhCCCCCCCHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH---HHh
Confidence 4689999999999999999 8999999999999999999988877764333333 346799999 999999 999
Q ss_pred ccCeeEEEEecCCCCCCCcccCccccceeeeeCCCeEEEeeeEEEeeCCCCCCeEEEEeec
Q psy1218 75 HEVVLGVVESSEVCRGYNNFEKHYQHRTRCPLGPKGCASCGVIMSVNNSLYLGPILKFGNA 135 (136)
Q Consensus 75 ~g~~~~~~a~tEp~~Gsd~~~~~~~~~t~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~ 135 (136)
+|+.+.|+++|||++ |...+. ++++|+|+|||+|.|+||+.+||+++|+|+.
T Consensus 136 ~g~~~~~~a~tEp~~--~~~~~~-------t~~~~g~vlnG~K~~~s~a~~Ad~~~v~art 187 (439)
T 3m9v_A 136 AGDAVVCSGIKDHHT--AVTTLR-------PDGAGGWLLSGRKTLVSMAPVGTHFVINART 187 (439)
T ss_dssp HTCCCEEEECEECTT--CCCEEE-------ECSSSCEEEEEEEEEETTGGGCSEEEECEEE
T ss_pred CCCceEEEeecCCCC--CCCcee-------eccCCEEEEEeEEEeecCccccCEEEEEEEe
Confidence 999999999999974 433321 2378899999999999999999999999975
No 32
>2rfq_A 3-HSA hydroxylase, oxygenase; rhodococcus SP. RHA1, structural genomics protein structure initiative, midwest center for structural genomics, MCSG; HET: 1PS; 1.65A {Rhodococcus SP} PDB: 3aff_A 3afe_A
Probab=99.93 E-value=1.1e-25 Score=173.13 Aligned_cols=114 Identities=17% Similarity=0.067 Sum_probs=104.1
Q ss_pred CcccCCCcCCCCCCCCCCCCCHHHHHHHHHHHHhcCCchhHHHHHhhhhhHHHHhcCCCHHHHHhhcCCcccccccCeeE
Q psy1218 1 MGELGLMGVEVPEDLGGTGLDYLAYAIATEEISRGCASCGVIMSVNNSLYLGPLLKFDFRPMLLKLVFHGTLVCHEVVLG 80 (136)
Q Consensus 1 l~~~G~~~l~vP~~~GG~g~~~~~~~~~~e~la~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~~~~g~~~~ 80 (136)
|+++||+++.+|++|||.|+++.+++.+.|++++.|+++++++.++. .....|..+++++|+++|+| +|+.+.
T Consensus 44 l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~------~g~~~~ 116 (394)
T 2rfq_A 44 LQETGFFRLLQPEQWGGYQADPVLFYSAVRKIASACGSTGWVSSIIG-VHNWHLALFSQQAQEDVWGN------DTDVRI 116 (394)
T ss_dssp HHHHTGGGTTSCGGGTCCCCCHHHHHHHHHHHHTTCHHHHHHHHHHH-HHHHHHTTSCHHHHHHHHSS------CTTCCE
T ss_pred HHHCCCceecCchhhCCCCCCHHHHHHHHHHHHhhChhHHHHHHHHH-HHHHHHHhCCHHHHHHHhCC------CCCeEE
Confidence 46899999999999999999999999999999999999998777765 67788899999999999998 688899
Q ss_pred EEEecCCCCCCCcccCccccceeeeeCCCeEEEeeeEEEeeCCCCCCeEEEEeec
Q psy1218 81 VVESSEVCRGYNNFEKHYQHRTRCPLGPKGCASCGVIMSVNNSLYLGPILKFGNA 135 (136)
Q Consensus 81 ~~a~tEp~~Gsd~~~~~~~~~t~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~ 135 (136)
++++| | +|++++++|||+|||+|.||||+.+||+++|+|+.
T Consensus 117 ~~a~t-p-------------~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~a~~ 157 (394)
T 2rfq_A 117 SSSYA-P-------------MGAGQVVDGGYTVNGAWAWSSGCDHASWAVLGGPV 157 (394)
T ss_dssp EEECS-C-------------SEEEEEETTEEEEEEEEEEETTGGGCSEEEEEEEE
T ss_pred EeccC-C-------------CceEEEeCCeEEEeeeEeccCCCcccceEEEeeee
Confidence 99988 4 27889999999999999999999999999999975
No 33
>2jbr_A P-hydroxyphenylacetate hydroxylase C2 oxygenase C; flavoenzyme hydroxylase, oxidoreductase; 2.3A {Acinetobacter baumannii} PDB: 2jbs_A* 2jbt_A*
Probab=99.93 E-value=1.5e-25 Score=174.03 Aligned_cols=114 Identities=12% Similarity=-0.033 Sum_probs=103.8
Q ss_pred CcccCCCcCCCCCCCCCCCCCHHHHHHHHHHHHhcCCchhHHHHHhhhhhHHHHhcCCCHHHHHhhcCCcccccccCeeE
Q psy1218 1 MGELGLMGVEVPEDLGGTGLDYLAYAIATEEISRGCASCGVIMSVNNSLYLGPLLKFDFRPMLLKLVFHGTLVCHEVVLG 80 (136)
Q Consensus 1 l~~~G~~~l~vP~~~GG~g~~~~~~~~~~e~la~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~~~~g~~~~ 80 (136)
|+++||+++.+|++|||.|+++.+++.+.|++++.|+++++.+..+. .....|..+++++||++|+| + |+.+.
T Consensus 72 l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~---~---g~~~~ 144 (422)
T 2jbr_A 72 LKEIGLHRAFQPKVYGGLEMSLPDFANCIVTLAGACAGTAWAFSLLC-THSHQIAMFSKQLQDEIWLK---D---PDATA 144 (422)
T ss_dssp HHHTTGGGSSSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHH-HHHHHHTTSCHHHHHHHHTT---C---TTCCE
T ss_pred HHHCCchhcCCchhcCCCCCCHHHHHHHHHHHHhhCcCHHHHHHHHH-HHHHHHHhCCHHHHHHHHcc---C---CCeEE
Confidence 46899999999999999999999999999999999999988777664 67788999999999999999 5 88899
Q ss_pred EEEecCCCCCCCcccCccccceeeeeCCCeEEEeeeEEEeeCCCCCCeEEEEeec
Q psy1218 81 VVESSEVCRGYNNFEKHYQHRTRCPLGPKGCASCGVIMSVNNSLYLGPILKFGNA 135 (136)
Q Consensus 81 ~~a~tEp~~Gsd~~~~~~~~~t~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~ 135 (136)
++++| | +|++++++|||+|||+|.||||+.+||+++|+|+.
T Consensus 145 a~a~t-p-------------~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~a~~ 185 (422)
T 2jbr_A 145 SSSIA-P-------------FGKVEEVEGGIILNGDYGWSSGCDHAEYAIVGFNR 185 (422)
T ss_dssp EEECS-C-------------CSEEEEETTEEEEEEEEEEETTGGGCSEEEEEEEE
T ss_pred EeecC-C-------------CeeEEEeCCEEEEeeeEeeecCCccccEEEEEEEe
Confidence 99988 4 26889999999999999999999999999999975
No 34
>2or0_A Hydroxylase; APC7385, rhodococcus SP. RHA1, structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 2.10A {Rhodococcus SP}
Probab=99.93 E-value=1e-25 Score=174.49 Aligned_cols=114 Identities=9% Similarity=-0.115 Sum_probs=104.5
Q ss_pred CcccCCCcCCCCCCCCCCCCCHHHHHHHHHHHHhcCCchhHHHHHhhhhhHHHHhcCCCHHHHHhhcCCcccccccCeeE
Q psy1218 1 MGELGLMGVEVPEDLGGTGLDYLAYAIATEEISRGCASCGVIMSVNNSLYLGPLLKFDFRPMLLKLVFHGTLVCHEVVLG 80 (136)
Q Consensus 1 l~~~G~~~l~vP~~~GG~g~~~~~~~~~~e~la~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~~~~g~~~~ 80 (136)
|+++||+++.+|++|||.|+++.+++.+.|++++.|+++++++.++. .....|..+++++||++|+| +|+.++
T Consensus 57 l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~------~g~~~~ 129 (414)
T 2or0_A 57 LRDSGAIRLLQPRLYGGYEVHPREFAETVMGVAALDGASGWVTGIVG-VHPWELAFADPQVQEEIWGE------DNDTWM 129 (414)
T ss_dssp HHHHTGGGTTSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHT-THHHHHTTSCHHHHHHHHSS------CTTCCE
T ss_pred HHHCCCchhcCchhhCCCCCCHHHHHHHHHHHHhhChHHHHHHHHHH-HHHHHHHhCCHHHHHHHHcc------CCCeEE
Confidence 46899999999999999999999999999999999999988777765 67788999999999999999 699999
Q ss_pred EEEecCCCCCCCcccCccccceeeeeCCCeEEEeeeEEEeeCCCCCCeEEEEeec
Q psy1218 81 VVESSEVCRGYNNFEKHYQHRTRCPLGPKGCASCGVIMSVNNSLYLGPILKFGNA 135 (136)
Q Consensus 81 ~~a~tEp~~Gsd~~~~~~~~~t~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~ 135 (136)
++++| | +|++++++|||+|||+|.||||+.+||+++|+|++
T Consensus 130 a~a~t-p-------------~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~a~~ 170 (414)
T 2or0_A 130 ASPYA-P-------------MGVATPVDGGYVLKGRWSFSSGTDHCQWAFLGAMV 170 (414)
T ss_dssp ECCCS-C-------------CEEEEEETTEEEEEEEEEEETTGGGCSEEEEEEEE
T ss_pred EeccC-C-------------CceeEEECCeEEEEeeEeccCCCchhhEEEEEEEe
Confidence 99988 5 27889999999999999999999999999999975
No 35
>3djl_A Protein AIDB; alpha helix, beta-barrel, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.70A {Escherichia coli} PDB: 3u33_A*
Probab=99.86 E-value=6.5e-22 Score=158.13 Aligned_cols=121 Identities=9% Similarity=-0.059 Sum_probs=96.1
Q ss_pred CcccCCCcCCC--CCCCCCCCCCHHHHHHHHHHHHhcCCchhHHHHHhhhhhHHHHhcCCCHHHHHhhcCCcccccccCe
Q psy1218 1 MGELGLMGVEV--PEDLGGTGLDYLAYAIATEEISRGCASCGVIMSVNNSLYLGPLLKFDFRPMLLKLVFHGTLVCHEVV 78 (136)
Q Consensus 1 l~~~G~~~l~v--P~~~GG~g~~~~~~~~~~e~la~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~~~~g~~ 78 (136)
+.+.||+++.+ |++|||.+..........+ .+........++. .....|..++ ++||++|+| ++++|+.
T Consensus 95 l~e~Gl~~l~~~~p~~~Gg~~~~~~~~~~~~~----~~~~~~~p~~~t~-~~~~~L~~~g-~eqk~~~lp---~l~sge~ 165 (541)
T 3djl_A 95 LCTNRVHNLAWEEDARSGAFVARAARFMLHAQ----VEAGSLCPITMTF-AATPLLLQML-PAPFQDWTT---PLLSDRY 165 (541)
T ss_dssp HHHTTTTTGGGSTTCCTTHHHHHHHHHHHHHH----HCSTTHHHHHHHH-HHHHHHHHHC-CGGGGGGHH---HHTCSCC
T ss_pred HHhCCcccCCCCCCCCCCcHHHHHHHHHHHHH----HHHhhhcHHHHHH-HHHHHHHHcC-HHHHHHHHH---HHhCCCc
Confidence 35789999999 7999965444433333332 3333333334443 4667788888 999999999 9999998
Q ss_pred -------------eEEEEecCCCCCCCcccCccccceeeeeC-CCeEEEeeeEEEeeCCCCCCeEEEEeec
Q psy1218 79 -------------LGVVESSEVCRGYNNFEKHYQHRTRCPLG-PKGCASCGVIMSVNNSLYLGPILKFGNA 135 (136)
Q Consensus 79 -------------~~~~a~tEp~~Gsd~~~~~~~~~t~a~~~-~~g~~l~G~k~~vs~~~~a~~~lv~a~~ 135 (136)
++|+++|||++|||+.++. |+|+++ +|+|+|||+|+|+| +.+||+++|+|++
T Consensus 166 ~p~~~~~~~~~g~~~~~a~TEp~~GSDl~~~~----T~A~~~~~g~y~LnG~K~f~S-a~~Ad~~lVlArt 231 (541)
T 3djl_A 166 DSHLLPGGQKRGLLIGMGMTEKQGGSDVMSNT----TRAERLEDGSYRLVGHKWFFS-VPQSDAHLVLAQT 231 (541)
T ss_dssp CCCSSCGGGSSSCCEEEECCBTTBSSCGGGCC----CEEEECTTSCEEEEEEEEEEE-CTTSSEEEEEEEE
T ss_pred ccccccccccccceeEEEeccCCcCCCcccce----eEEEEcCCCeEEEEEEEEeec-ccccCEEEEEEEE
Confidence 7899999999999999875 899998 78899999999999 8999999999985
No 36
>1w07_A Acyl-COA oxidase; oxidoreductase, peroxisomal beta-oxidation, FAD cofactor; HET: FAD; 2.0A {Arabidopsis thaliana} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 2fon_A*
Probab=99.83 E-value=1.4e-21 Score=159.25 Aligned_cols=117 Identities=9% Similarity=-0.007 Sum_probs=96.4
Q ss_pred ccCCCcCCCCCCCCCCCCCHHHHHHHHHHHHhcCCchhHHHHHhhhhhHHHHhcCCCHHHHHhhcCCcccccccCeeEEE
Q psy1218 3 ELGLMGVEVPEDLGGTGLDYLAYAIATEEISRGCASCGVIMSVNNSLYLGPLLKFDFRPMLLKLVFHGTLVCHEVVLGVV 82 (136)
Q Consensus 3 ~~G~~~l~vP~~~GG~g~~~~~~~~~~e~la~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~~~~g~~~~~~ 82 (136)
+.|++. .+|++|| .+..+...+.|+++ .+.+ +.+|..++...|..+|+++|+++|+| ++++|+.++|+
T Consensus 68 ~~g~l~-~~p~e~G---~~~~~~~~v~e~~~---~~~~--~~~~~~l~~~~l~~~Gt~eqk~~~L~---~i~~Ge~~~~~ 135 (659)
T 1w07_A 68 KCAHAF-KRIIELR---LNEEEAGRLRHFID---QPAY--VDLHWGMFVPAIKGQGTEEQQKKWLS---LANKMQIIGCY 135 (659)
T ss_dssp HHHHHH-HHHHHTT---CCHHHHHHHHHHHC---CCCH--HHHHHHTHHHHHHHHSCHHHHHHHHH---HHHTTSSCEEE
T ss_pred HHHHHH-HhHHHhC---CCchHHHHHHHHhc---cchh--hhhHHhHHHHHHHHcCCHHHHHHHhh---HHhcCCEEEEE
Confidence 344544 4788887 45677777766664 3443 45554357788999999999999999 99999999999
Q ss_pred EecCCCCCCCcccCccccceeeeeC--CCeEEEe-----eeEEEeeC-CCCCCeEEEEeec
Q psy1218 83 ESSEVCRGYNNFEKHYQHRTRCPLG--PKGCASC-----GVIMSVNN-SLYLGPILKFGNA 135 (136)
Q Consensus 83 a~tEp~~Gsd~~~~~~~~~t~a~~~--~~g~~l~-----G~k~~vs~-~~~a~~~lv~a~~ 135 (136)
++|||++|||+.++. |+|+++ +|+|+|| |+|.||+| +.+||+++|+|++
T Consensus 136 a~TEp~~GSd~~~l~----TtA~~d~~~~g~vLntP~~~G~K~~is~~a~~Ad~~lV~Ar~ 192 (659)
T 1w07_A 136 AQTELGHGSNVQGLE----TTATLDPKTDEFVIHTPTQTASKWWPGGLGKVSTHAVVYARL 192 (659)
T ss_dssp ECCBTTBSSCGGGCC----CEEEEETTTTEEEEECCSGGGSEECCTTTTTTCSEEEEEEEE
T ss_pred EecCCCCCCCcccce----eEEEEcCCCCEEEEcCCCCCeEEEeecCCCCCCCEEEEEEEE
Confidence 999999999999885 788887 6899999 99999999 8999999999985
No 37
>2ddh_A Acyl-COA oxidase; beta barrel, alpha UP-DOWN bundle, oxidoreductase; HET: FAD HXD; 2.07A {Rattus norvegicus} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 1is2_A*
Probab=99.78 E-value=3.1e-19 Score=145.52 Aligned_cols=111 Identities=7% Similarity=0.002 Sum_probs=89.6
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCchhHHHHHhhhhhHHHHhcCCCHHHHHhhcCCcccccccCeeEEEEecCCCCCCC
Q psy1218 13 EDLGGTGLDYLAYAIATEEISRGCASCGVIMSVNNSLYLGPLLKFDFRPMLLKLVFHGTLVCHEVVLGVVESSEVCRGYN 92 (136)
Q Consensus 13 ~~~GG~g~~~~~~~~~~e~la~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~~~~g~~~~~~a~tEp~~Gsd 92 (136)
++|||.+ ..+. .+.+++.....+.+ +.+|..++...|..+|+++|+++|+| ++.+|+.++|+++|||++|||
T Consensus 75 ~~~~~~~--~~~~-~~~~~~~~~~~~~~--~~~h~~l~~~~i~~~Gt~eq~~~~L~---~i~~Ge~~g~~a~TE~g~GSd 146 (661)
T 2ddh_A 75 REYGISD--PEEI-MWFKNSVHRGHPEP--LDLHLGMFLPTLLHQATAEQQERFFM---PAWNLEITGTYAQTEMGHGTH 146 (661)
T ss_dssp HHTTCCC--HHHH-HHHHHHHHTTCCCT--THHHHHTHHHHHC-CCCHHHHHHHHH---HHHTTSSCEEEECCBTTBSSC
T ss_pred HHcCCCC--chHH-HHHHHHhccchhhH--HHHHHHHHHHHHHHhCCHHHHHHHHH---HHhCCCeeEEEeeccCCcCcC
Confidence 4577765 3333 33667765433333 34454467889999999999999999 999999999999999999999
Q ss_pred cccCccccceeeeeC--CCeEEEe-----eeEEEeeC-CCCCCeEEEEeec
Q psy1218 93 NFEKHYQHRTRCPLG--PKGCASC-----GVIMSVNN-SLYLGPILKFGNA 135 (136)
Q Consensus 93 ~~~~~~~~~t~a~~~--~~g~~l~-----G~k~~vs~-~~~a~~~lv~a~~ 135 (136)
+.+++ |+|+++ +|+|+|| |+|.|++| +.+||+++|+|++
T Consensus 147 ~~~l~----TtA~~d~~~~~~vLntP~~~G~K~wis~~a~~Ad~~vV~Ar~ 193 (661)
T 2ddh_A 147 LRGLE----TTATYDPKTQEFILNSPTVTSIKWWPGGLGKTSNHAIVLAQL 193 (661)
T ss_dssp GGGCC----CEEEEETTTTEEEEECCSSTTSEECCTTTTTTCSEEEEEEEE
T ss_pred cccce----eEEEEcCCCCeEEEcCCCCCeEEEecCCCcccCCEEEEEEEE
Confidence 99885 788887 7899999 99999999 7899999999985
No 38
>1u8v_A Gamma-aminobutyrate metabolism dehydratase/isomerase; ALFA-helixes, beta-strands, lyase; HET: FAD; 1.60A {Clostridium aminobutyricum} SCOP: a.29.3.1 e.6.1.1
Probab=99.71 E-value=1.8e-17 Score=131.18 Aligned_cols=76 Identities=5% Similarity=-0.088 Sum_probs=65.9
Q ss_pred HHHhcCCC--HHHHHhhcCCcccccccCeeEEEEecCCCCC--------CCc-ccCccccceeeeeCCCeEEEeeeEEEe
Q psy1218 52 GPLLKFDF--RPMLLKLVFHGTLVCHEVVLGVVESSEVCRG--------YNN-FEKHYQHRTRCPLGPKGCASCGVIMSV 120 (136)
Q Consensus 52 ~~l~~~g~--~~~~~~~l~~~~~~~~g~~~~~~a~tEp~~G--------sd~-~~~~~~~~t~a~~~~~g~~l~G~k~~v 120 (136)
..+..+|+ ++||++||| ++++|+.+.|+++|||+.+ ||+ ..+ +++++++|||+|||+|.|+
T Consensus 118 ~~~~~~Gt~~~eqk~~~L~---~l~~Ge~~~a~a~TEP~~~rs~~~~~gSD~~~~~-----~~a~r~gdg~vlnG~K~~i 189 (490)
T 1u8v_A 118 EIDQKYGTNYHKNFTEYLK---YIQENDLIVDGAMTDPKGDRGLAPSAQKDPDLFL-----RIVEKREDGIVVRGAKAHQ 189 (490)
T ss_dssp HHHHHHCCCHHHHHHHHHH---HHHHHTCCEEEECCCCCSCTTSCGGGCSSTTSSC-----EEEEECSSEEEEEEEECSC
T ss_pred hHHHHhCCCHHHHHHHHHH---HHHhCCceeeeeeeCCCCCCcccccccCCcccce-----EEEEEECCEEEEEeEEEEe
Confidence 34558999 999999999 9999999999999999875 554 222 2778899999999999999
Q ss_pred eCCCCCCeEEEEeec
Q psy1218 121 NNSLYLGPILKFGNA 135 (136)
Q Consensus 121 s~~~~a~~~lv~a~~ 135 (136)
||+..||+++|+|+.
T Consensus 190 T~a~~Ad~~iV~art 204 (490)
T 1u8v_A 190 TGSINSHEHIIMPTI 204 (490)
T ss_dssp TTCTTCSEEEECCSS
T ss_pred eCCcccCEEEEEEec
Confidence 999999999999874
No 39
>2yyk_A 4-hydroxyphenylacetate-3-hydroxylase; structurome, riken spring-8 center, oxygnase component, 4- hydroxyphenylacetate 3-monooxygenase; 1.60A {Thermus thermophilus} PDB: 2yyl_A* 2yym_A* 2yyi_A* 2yyg_A* 2yyj_A*
Probab=99.64 E-value=5.4e-16 Score=122.44 Aligned_cols=68 Identities=10% Similarity=0.030 Sum_probs=59.2
Q ss_pred CHHHHHhhcCCcccccccCeeEEEEecCCCCC--------CCcccCccccceee-eeCCCeEEEeeeEEEeeCCCCCCeE
Q psy1218 59 FRPMLLKLVFHGTLVCHEVVLGVVESSEVCRG--------YNNFEKHYQHRTRC-PLGPKGCASCGVIMSVNNSLYLGPI 129 (136)
Q Consensus 59 ~~~~~~~~l~~~~~~~~g~~~~~~a~tEp~~G--------sd~~~~~~~~~t~a-~~~~~g~~l~G~k~~vs~~~~a~~~ 129 (136)
.+|||++||| ++++|+.+.++++|||+.| ||+. +. |++ ++++|+|+|||+|.|+|| ..||++
T Consensus 122 ~~eqk~~~L~---~l~~Ge~~~a~a~TEP~~grs~~~s~gsd~~-~~----~~~~~~~gdg~VlnG~K~~iT~-~~Ad~~ 192 (481)
T 2yyk_A 122 FAENVRNYYR---YLRDQDLATTHALTNPQVNRARPPSGQPDPY-IP----VGVVKQTEKGIVVRGARMTATF-PLADEV 192 (481)
T ss_dssp GHHHHHHHHH---HHHHHTCCEEEEECCCCCCTTC----CCCSC-SB----CEEEEECSSEEEEEEEEEEEEC-CCSSEE
T ss_pred HHHHHHHHHH---HHHcCCeEEEEeeECCCCCCCCCccccCCcc-cc----eEEEEEECCEEEEEeEEEEecc-ccccEE
Confidence 4799999999 9999999999999999976 5553 32 444 478999999999999999 999999
Q ss_pred EEEeec
Q psy1218 130 LKFGNA 135 (136)
Q Consensus 130 lv~a~~ 135 (136)
+|+|+.
T Consensus 193 iV~art 198 (481)
T 2yyk_A 193 LIFPSI 198 (481)
T ss_dssp EECCCS
T ss_pred EEEEec
Confidence 999975
No 40
>3hwc_A Chlorophenol-4-monooxygenase component 2; beta barrel, helix bundle, oxidoreductase; 2.50A {Burkholderia cepacia}
Probab=99.51 E-value=1.1e-14 Score=115.70 Aligned_cols=70 Identities=6% Similarity=-0.153 Sum_probs=59.6
Q ss_pred CCC--HHHHHhhcCCcccccccCeeEEEEecCCCC--------CCCcccCccccceeeeeCCCeEEEeeeEEEeeCCCCC
Q psy1218 57 FDF--RPMLLKLVFHGTLVCHEVVLGVVESSEVCR--------GYNNFEKHYQHRTRCPLGPKGCASCGVIMSVNNSLYL 126 (136)
Q Consensus 57 ~g~--~~~~~~~l~~~~~~~~g~~~~~~a~tEp~~--------Gsd~~~~~~~~~t~a~~~~~g~~l~G~k~~vs~~~~a 126 (136)
+++ .+|+++||| ++++|+.+.++++|||+. |||+ .+. + ..+++|||+|||+|.||||+..|
T Consensus 127 ~~~~~~eq~~~~L~---~l~~Ge~~~a~AltEP~~~rs~~~~~GSD~-~~~----~-~~~~gdg~VlnG~K~~iT~a~~A 197 (515)
T 3hwc_A 127 EGRNLTQNIHNFLK---LLREKDLNCPLNFVDPQTDRSSDAAQARSP-NLR----I-VEKTDDGIIVNGVKAVGTGIAFG 197 (515)
T ss_dssp TTCCHHHHHHHHHH---HHHHTTCCCCEECCCCCCCCCSCTTTSCCS-BCE----E-EEECSSEEEEEEEEEEEESGGGC
T ss_pred cCCCHHHHHHHHHH---HHHcCCcEEEEEeeCCCCCcccccccCCCc-ceE----E-EEEECCEEEEEEEEEEECCcccc
Confidence 554 688999999 999999999999999986 4676 432 3 34578999999999999999999
Q ss_pred CeEEEEeec
Q psy1218 127 GPILKFGNA 135 (136)
Q Consensus 127 ~~~lv~a~~ 135 (136)
|+++|+|+.
T Consensus 198 d~~lV~a~t 206 (515)
T 3hwc_A 198 DYMHIGCLY 206 (515)
T ss_dssp SEEEECCCC
T ss_pred CEEEEEEEe
Confidence 999999874
No 41
>4g5e_A 2,4,6-trichlorophenol 4-monooxygenase; oxidoreductase; 2.50A {Cupriavidus necator JMP134}
Probab=98.39 E-value=4.1e-07 Score=72.40 Aligned_cols=72 Identities=10% Similarity=-0.118 Sum_probs=51.6
Q ss_pred HHHHhhcCCcccccccCeeEEEEecCCCCC-CCcccCccccce-eeeeCCCeEEEeeeEEEeeCCCCCCeEEEEeec
Q psy1218 61 PMLLKLVFHGTLVCHEVVLGVVESSEVCRG-YNNFEKHYQHRT-RCPLGPKGCASCGVIMSVNNSLYLGPILKFGNA 135 (136)
Q Consensus 61 ~~~~~~l~~~~~~~~g~~~~~~a~tEp~~G-sd~~~~~~~~~t-~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~ 135 (136)
+...+|++ .+.++++..+.++++|... |-..+-+..+.. .++++++||+|||.|.|+||+..||+++|+++.
T Consensus 134 ~n~~~y~~---~~~~~DL~~~~a~~dPk~dRs~~~~~q~d~~l~Vve~~~dGiVVnGaK~~~T~a~~Ad~i~V~a~t 207 (517)
T 4g5e_A 134 KNIVDFVN---FAKKHDLNCAPQFVDPQMDRSNPDAQQRSPGLRVIEKNDKGIVVSGVKAIGTGVAFADWIHIGVFF 207 (517)
T ss_dssp HHHHHHHH---HHHHHTCCEEEECCCCCC-----------CBCEEEEECSSEEEEEEEEEEEESGGGCSEEEECCCC
T ss_pred HHHHHHHH---HHHhcCceeeeeeeCCCCCCCCCchhcCCCceEEEEEcCCeEEEeeEehhhcCccccCEEEEEeec
Confidence 45567888 8999999999999999631 111110000012 346788999999999999999999999998864
Done!