Query psy12185
Match_columns 317
No_of_seqs 244 out of 1617
Neff 8.4
Searched_HMMs 29240
Date Fri Aug 16 20:53:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12185.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12185hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tnx_A Papain; hydrolase, cyto 100.0 6.1E-69 2.1E-73 499.7 30.0 262 29-316 58-322 (363)
2 3qj3_A Cathepsin L-like protei 100.0 4E-69 1.4E-73 498.0 27.9 274 28-316 13-294 (331)
3 3qt4_A Cathepsin-L-like midgut 100.0 1.6E-68 5.4E-73 492.9 24.8 264 31-316 21-292 (329)
4 1by8_A Protein (procathepsin K 100.0 7.2E-68 2.5E-72 486.9 25.1 265 32-316 6-277 (314)
5 2c0y_A Procathepsin S; proenzy 100.0 1.2E-67 4.1E-72 485.6 24.4 263 32-316 7-278 (315)
6 1pci_A Procaricain; zymogen, h 100.0 4.5E-67 1.5E-71 482.9 27.1 263 29-316 14-281 (322)
7 2o6x_A Procathepsin L1, secret 100.0 5.9E-67 2E-71 480.0 25.2 259 35-316 3-269 (310)
8 1cs8_A Human procathepsin L; p 100.0 1E-66 3.4E-71 479.7 25.0 261 32-316 7-279 (316)
9 1xkg_A DER P I, major mite fec 100.0 6.4E-63 2.2E-67 452.8 22.0 253 35-316 6-266 (312)
10 3pdf_A Cathepsin C, dipeptidyl 100.0 1.7E-57 5.9E-62 433.0 19.4 245 52-316 136-399 (441)
11 3hhi_A Cathepsin B-like cystei 100.0 4E-56 1.4E-60 410.2 15.1 238 54-316 2-276 (325)
12 3pbh_A Procathepsin B; thiol p 100.0 1.3E-52 4.3E-57 386.0 16.9 226 63-316 11-278 (317)
13 3kwz_A Cathepsin K; enzyme inh 100.0 4.7E-50 1.6E-54 350.6 17.8 173 138-316 1-178 (215)
14 1cqd_A Protein (protease II); 100.0 1.1E-49 3.8E-54 349.4 19.0 172 137-316 2-177 (221)
15 1m6d_A Cathepsin F, catsf; pap 100.0 8.8E-50 3E-54 348.4 17.7 172 138-316 1-177 (214)
16 3i06_A Cruzipain; autocatalyti 100.0 1.9E-49 6.4E-54 346.6 19.6 172 138-316 1-178 (215)
17 2cio_A Papain; hydrolase/inhib 100.0 3.5E-49 1.2E-53 344.1 20.0 169 138-316 1-171 (212)
18 1o0e_A Ervatamin C; plant cyst 100.0 3.3E-49 1.1E-53 343.1 19.5 167 138-316 1-169 (208)
19 1iwd_A Ervatamin B; cysteine p 100.0 3.8E-49 1.3E-53 344.5 19.3 170 138-316 1-174 (215)
20 1ppo_A Protease omega; hydrola 100.0 2.6E-49 8.9E-54 345.8 17.4 171 138-316 1-175 (216)
21 2bdz_A Mexicain; cysteine prot 100.0 4.7E-49 1.6E-53 343.7 18.5 169 138-316 1-171 (214)
22 2b1m_A SPE31; papain-like, sug 100.0 5.8E-49 2E-53 349.9 19.5 175 137-316 1-184 (246)
23 2xu3_A Cathepsin L1; hydrolase 100.0 4.2E-49 1.4E-53 345.6 18.3 173 138-316 1-183 (220)
24 8pch_A Cathepsin H; hydrolase, 100.0 1.8E-49 6.3E-54 348.0 15.9 176 138-316 1-182 (220)
25 3p5u_A Actinidin; SAD, cystein 100.0 3.1E-49 1.1E-53 346.5 17.1 173 138-316 1-178 (220)
26 1yal_A Chymopapain; hydrolase, 100.0 4.5E-49 1.5E-53 344.8 17.4 171 138-316 1-175 (218)
27 3ovx_A Cathepsin S; hydrolase, 100.0 3.3E-49 1.1E-53 346.0 16.4 173 138-316 2-181 (218)
28 1s4v_A Cysteine endopeptidase; 100.0 5.6E-49 1.9E-53 346.6 17.4 174 137-316 1-179 (229)
29 2oul_A Falcipain 2; cysteine p 100.0 6.4E-49 2.2E-53 348.8 17.7 168 136-313 16-185 (241)
30 2fo5_A Cysteine proteinase EP- 100.0 5E-49 1.7E-53 352.5 16.1 174 136-316 2-184 (262)
31 3bwk_A Cysteine protease falci 100.0 1E-48 3.4E-53 347.9 16.8 169 135-313 17-187 (243)
32 3ioq_A CMS1MS2; caricaceae, cy 100.0 1.5E-48 5.2E-53 340.4 16.8 169 138-316 1-171 (213)
33 3u8e_A Papain-like cysteine pr 100.0 1.1E-48 3.9E-53 343.3 14.9 172 138-316 1-179 (222)
34 3f5v_A DER P 1 allergen; aller 100.0 3.9E-48 1.3E-52 340.0 15.3 173 135-316 7-186 (222)
35 3f75_A Toxopain-2, cathepsin L 100.0 2.5E-48 8.6E-53 341.7 14.2 170 136-312 5-177 (224)
36 3cbj_A Cathepsin B; cathepsin 100.0 7.1E-46 2.4E-50 333.9 15.5 174 136-316 5-221 (266)
37 3qsd_A Cathepsin B-like peptid 100.0 8.4E-46 2.9E-50 331.4 15.4 173 137-316 2-217 (254)
38 1deu_A Procathepsin X; cystein 100.0 2.7E-45 9.1E-50 331.5 15.9 172 135-316 33-231 (277)
39 3ois_A Cysteine protease; alph 100.0 4.2E-42 1.4E-46 313.1 11.3 213 80-316 14-251 (291)
40 2wbf_X Serine-repeat antigen p 100.0 4.8E-41 1.7E-45 302.5 15.6 170 140-312 9-210 (265)
41 2cb5_A Protein (bleomycin hydr 100.0 1.2E-30 4.1E-35 247.0 13.0 93 137-231 47-169 (453)
42 2e01_A Cysteine proteinase 1; 100.0 4.3E-30 1.5E-34 243.5 13.2 90 137-228 52-169 (457)
43 3pw3_A Aminopeptidase C; bleom 99.9 4.3E-23 1.5E-27 191.6 11.9 77 149-227 21-108 (383)
44 3f75_P Toxopain-2, cathepsin L 99.7 4.3E-18 1.5E-22 130.2 9.8 66 31-99 19-85 (106)
45 2l95_A Crammer, LP06209P; cyst 99.7 1.4E-17 4.7E-22 121.8 7.3 64 34-99 7-72 (80)
46 1pxv_A Cysteine protease; hydr 96.4 0.026 9.1E-07 45.9 10.2 109 154-313 25-141 (183)
47 1x9y_A Cysteine proteinase; ha 95.8 0.069 2.3E-06 48.1 10.6 109 154-313 201-317 (367)
48 1cv8_A Staphopain; cysteine pr 95.8 0.092 3.2E-06 42.6 10.4 107 154-312 16-130 (174)
49 3erv_A Putative C39-like pepti 80.2 2.6 8.9E-05 36.1 5.6 49 258-312 131-188 (236)
No 1
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya}
Probab=100.00 E-value=6.1e-69 Score=499.65 Aligned_cols=262 Identities=29% Similarity=0.486 Sum_probs=218.4
Q ss_pred chHHHHHHHHHHHHHhCCccCch-hHHHHHHHHHHHHHHHHHHhhcCCCCCCeEEecCcCCCCCHHHHHHhhhccccccc
Q psy12185 29 NLEQKLELFSSFQQRYKKSYSKS-EHDIRFKNFEKSLDIIEELNKNRQSPESARYGITEFSDLSEEEFKTRHLRHSVNKH 107 (317)
Q Consensus 29 ~~~~~~~~f~~~~~~~~K~Y~~~-E~~~R~~iF~~n~~~I~~~N~~~~~~~~~~~g~N~fsD~t~eEf~~~~~~~~~~~~ 107 (317)
+++++..+|++|+.+|+|+|.+. |+.+|++||++|+++|++||+ .+.+|++|+|+|+|||.|||+++++..... .
T Consensus 58 s~~~~~~lf~~f~~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~~N~---~~~sy~~g~N~FaDlT~eEf~~~~~~~~~~-~ 133 (363)
T 3tnx_A 58 STERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNK---KNNSYWLGLNVFADMSNDEFKEKYTGSIAG-N 133 (363)
T ss_dssp CHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHTT---SCCSEEECSCTTTTSCHHHHHHHHSCSSCS-C
T ss_pred CHHHHHHHHHHHHHHcCCcCCCHHHHHHHHHHHHHHHHHHHHHHc---CCCCeEEeccccccCCHHHHHHHhcccccc-c
Confidence 44678999999999999999998 999999999999999999994 567999999999999999997665432211 0
Q ss_pred ccccCCCCCCCCCccccccccccCCCCCCCCCceeecccCCCCCCCcCCCCCccHHHHHHHHHHHHHHHHHcCCCccCCH
Q psy12185 108 VLMSHHKHHDHHHNHVKKRSITTGITIPTGIPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSV 187 (317)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~DwR~~g~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~~~~lS~ 187 (317)
.... ....... ......+||++||||++|+||||||||.||||||||++++||++++|+++..+.||+
T Consensus 134 ~~~~---~~~~~~~---------~~~~~~~lP~s~DWR~~g~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~LSe 201 (363)
T 3tnx_A 134 YTTT---ELSYEEV---------LNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSAWAFSAVSTIESIIKIRTGNLNEYSE 201 (363)
T ss_dssp CCCS---SSSSSCC---------CCCSCCCCCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCH
T ss_pred cccc---ccccccc---------cCcccCCCCcceecccCCCCCCCccCCcCCchhhhhhcccHHHHHHHHcCCCCCcCH
Confidence 0000 0000000 012245799999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCCCCCCCchHHHHHHHHHhCCCCCCCCCCccccCCCcccCCCCCCCceEEeeeEEecCCCcHHHHHHHHH
Q psy12185 188 QEVIDCAGNGNMGCSGGDFCALLDWMDVNKVVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSILTDIA 267 (317)
Q Consensus 188 q~l~dC~~~~~~gC~GG~~~~a~~y~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~~~~~~~~~~i~~al~ 267 (317)
|+|+||+. .+.||+||++..||+|+.+ .||++|++|||.+.++.|..........++.+|..+. ..++..++.+|+
T Consensus 202 Q~LvdC~~-~~~GC~GG~~~~a~~yi~~--~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~-~~~e~~l~~~v~ 277 (363)
T 3tnx_A 202 QELLDCDR-RSYGCNGGYPWSALQLVAQ--YGIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQ-PYNEGALLYSIA 277 (363)
T ss_dssp HHHHHHCT-TSCTTBCCCHHHHHHHHHH--TCBCBTTTSCCCSSCCCCCGGGGCSCSBCCCEEEEEC-SSCHHHHHHHHT
T ss_pred HHHhcccC-CCCCCCCCChHHHHhHHHh--cCccccccCCCcCcCCCcccCCCCCceeeccceEEcc-hhhHHHHHHHHH
Confidence 99999998 7889999999999999987 6999999999999998887644432456777777665 567888888886
Q ss_pred hCCCeEEEEec--ccccccCCCeEeCCCCCCCCCCCeEEEEEEeecCCCee
Q psy12185 268 THGPVIAAVNA--LTWQYYLGGVIQYNCDGSLANINHAVQIVGYDNYSRTW 316 (317)
Q Consensus 268 ~~gPv~v~i~~--~~f~~Y~~GIy~~~c~~~~~~~~Hav~iVGyg~~~~~W 316 (317)
+|||+|+|++ ++|++|++|||...|+.. +||||+|||||+ +||
T Consensus 278 -~gPvsvai~a~~~~F~~Y~sGVy~~~~~~~---lnHaV~iVGyG~--~YW 322 (363)
T 3tnx_A 278 -NQPVSVVLEAAGKDFQLYRGGIFVGPCGNK---VDHAVAAVGYGP--NYI 322 (363)
T ss_dssp -TSCEEEEECCCSHHHHTEEEEEECCCCCSC---CCEEEEEEEEET--TEE
T ss_pred -cCCcEEEEEecchhhhCCCCCEECCCCCCC---CCeEEEEEEcCC--CcE
Confidence 5999999998 689999999999888754 799999999997 477
No 2
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0
Probab=100.00 E-value=4e-69 Score=497.97 Aligned_cols=274 Identities=30% Similarity=0.525 Sum_probs=227.1
Q ss_pred CchHHHHHHHHHHHHHhCCccCch-hHHHHHHHHHHHHHHHHHHhhc-CCCCCCeEEecCcCCCCCHHHHHHhhhccccc
Q psy12185 28 PNLEQKLELFSSFQQRYKKSYSKS-EHDIRFKNFEKSLDIIEELNKN-RQSPESARYGITEFSDLSEEEFKTRHLRHSVN 105 (317)
Q Consensus 28 ~~~~~~~~~f~~~~~~~~K~Y~~~-E~~~R~~iF~~n~~~I~~~N~~-~~~~~~~~~g~N~fsD~t~eEf~~~~~~~~~~ 105 (317)
+.+..+..+|++|+.+|+|+|.+. |+.+|++||++|+++|++||++ ..+..+|++|+|+|+|||.|||++.++ +...
T Consensus 13 ~~~~~l~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~~~~-~~~~ 91 (331)
T 3qj3_A 13 LPSTFVAEKWENFKTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQGLVSYTLGVNLFTDMTPEEMKAYTH-GLIM 91 (331)
T ss_dssp CCHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSEEECCSTTTTCCHHHHHHHHS-CCCC
T ss_pred CCCHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCceeecccccccCCHHHHHHHhc-cccc
Confidence 344567899999999999999998 9999999999999999999975 235789999999999999999976543 2221
Q ss_pred ccccccCCCCCCCCCccccccccccCCCCCCCCCceeecccCCCCCCCcCCCCCccHHHHHHHHHHHHHHHHHcCC--Cc
Q psy12185 106 KHVLMSHHKHHDHHHNHVKKRSITTGITIPTGIPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGT--LS 183 (317)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~DwR~~g~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~--~~ 183 (317)
.+........+.... . .......+||++||||++|+||||||||.||||||||++++||++++|+++. .+
T Consensus 92 --~~~~~~~~~~~~~~~----~--~~~~~~~~lP~s~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~~ 163 (331)
T 3qj3_A 92 --PADLHKNGIPIKTRE----D--LGLNASVRYPASFDWRDQGMVSPVKNQGSCGSSWAFSSTGAIESQMKIANGAGYDS 163 (331)
T ss_dssp --CSSTTTTCEEECSGG----G--GTCCSSCCCCSSEEGGGGTCSCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCTTSCC
T ss_pred --cccccccCccccccc----c--cccccccCCCcceecccCCccCCCccCcccchhhHHHHHHHHHHHHHHHhCCCccc
Confidence 000000000000000 0 0001234799999999999999999999999999999999999999999998 89
Q ss_pred cCCHHHHhhcCCCCCCCCCCCchHHHHHHHHHhCCCCCCCCCCccccCCCcccCCCCCCCceEEeeeEEecCCCcHHHHH
Q psy12185 184 LLSVQEVIDCAGNGNMGCSGGDFCALLDWMDVNKVVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSIL 263 (317)
Q Consensus 184 ~lS~q~l~dC~~~~~~gC~GG~~~~a~~y~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~~~~~~~~~~i~ 263 (317)
+||+|+|+||+. .+.||+||++..||+|+.++ .||++|++|||.+.++.|...... ..++|++|..+. ..++++||
T Consensus 164 ~LSeQ~LvdC~~-~~~GC~GG~~~~a~~yi~~~-~Gi~~e~~yPY~~~~~~C~~~~~~-~~~~i~~~~~v~-~~~e~~lk 239 (331)
T 3qj3_A 164 SVSEQQLVDCVP-NALGCSGGWMNDAFTYVAQN-GGIDSEGAYPYEMADGNCHYDPNQ-VAARLSGYVYLS-GPDENMLA 239 (331)
T ss_dssp CBCHHHHHHHCT-TSCGGGCCCHHHHHHHHHHH-TCEEBTTTSCCCSSCCCCCCCTTS-EEECCSEEEEES-SCCHHHHH
T ss_pred CcCHHHHhhhcc-CCCCCCCCCHHHHHHHHHHc-CCcCcccccCccCCCCCCCCCccc-ceeEeeEEEEeC-CCCHHHHH
Confidence 999999999998 58999999999999999885 599999999999999999987666 678899998775 56899999
Q ss_pred HHHHhCCCeEEEEec-ccccccCCCeEeC-CCCCCCCCCCeEEEEEEeecCC--Cee
Q psy12185 264 TDIATHGPVIAAVNA-LTWQYYLGGVIQY-NCDGSLANINHAVQIVGYDNYS--RTW 316 (317)
Q Consensus 264 ~al~~~gPv~v~i~~-~~f~~Y~~GIy~~-~c~~~~~~~~Hav~iVGyg~~~--~~W 316 (317)
++|+++|||+|+|++ .+|++|++|||.. .|.... ++|||+|||||+++ +||
T Consensus 240 ~al~~~GPV~v~i~a~~~f~~Y~~Gvy~~~~c~~~~--~~HaV~iVGyg~~~g~~yW 294 (331)
T 3qj3_A 240 DMVATKGPVAVAFDADDPFGSYSGGVYYNPTCETNK--FTHAVLIVGYGNENGQDYW 294 (331)
T ss_dssp HHHHHHCCEEEEECCCTTGGGEEEEEECCTTCCSSC--CCEEEEEEEEEEETTEEEE
T ss_pred HHHHhCCCEEEEEEcccccccccCceEeCCCCCCCc--CCEEEEEEEEeccCCceEE
Confidence 999999999999999 6699999999987 686544 89999999999876 477
No 3
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor}
Probab=100.00 E-value=1.6e-68 Score=492.92 Aligned_cols=264 Identities=28% Similarity=0.461 Sum_probs=222.4
Q ss_pred HHHHHHHHHHHHHhCCccCch-hHHHHHHHHHHHHHHHHHHhhcC-CCCCCeEEecCcCCCCCHHHHHHhhhcccccccc
Q psy12185 31 EQKLELFSSFQQRYKKSYSKS-EHDIRFKNFEKSLDIIEELNKNR-QSPESARYGITEFSDLSEEEFKTRHLRHSVNKHV 108 (317)
Q Consensus 31 ~~~~~~f~~~~~~~~K~Y~~~-E~~~R~~iF~~n~~~I~~~N~~~-~~~~~~~~g~N~fsD~t~eEf~~~~~~~~~~~~~ 108 (317)
.....+|++||.+|+|+|.+. |+.+|+.||++|+++|++||++. .+..+|++|+|+|+|||.|||++ + ++......
T Consensus 21 ~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~-~-~g~~~~~~ 98 (329)
T 3qt4_A 21 SLFQEQWSQFKLTHKKSYSSPIEEIRRQLIFKDNVAKIAEHNAKFEKGEVTYSKAMNQFGDMSKEEFLA-Y-VNRGKAQK 98 (329)
T ss_dssp CHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSEEECCCGGGGCCHHHHHH-H-HHHTCCC-
T ss_pred HHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCeEEeccccccCCHHHHHH-h-cCCccccc
Confidence 356789999999999999997 99999999999999999999752 35789999999999999999976 3 33221000
Q ss_pred cccCC-CCCCCCCccccccccccCCCCCCCCCceeecccCCCCCCCcCCCCCccHHHHHHHHHHHHHHHHHcCCCccCCH
Q psy12185 109 LMSHH-KHHDHHHNHVKKRSITTGITIPTGIPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSV 187 (317)
Q Consensus 109 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~lP~~~DwR~~g~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~~~~lS~ 187 (317)
+.... ....+ . ....+||++||||++ +||||||||.||||||||++++||++++|+++..++||+
T Consensus 99 ~~~~~~~~~~~------------~-~~~~~lP~~~DwR~~-~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSe 164 (329)
T 3qt4_A 99 PKHPENLRMPY------------V-SSKKPLAASVDWRSN-AVSEVKDQGQCGSSWSFSTTGAVEGQLALQRGRLTSLSE 164 (329)
T ss_dssp -----CCEEEC------------C-CCCSCCCSCEECTTT-SCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCH
T ss_pred ccccccccccc------------c-CCccCCCCCEEcccc-ccCCCccCCCCcChHHHHHHHHHHHHHHHHcCCcccCCH
Confidence 00000 00000 0 011479999999999 999999999999999999999999999999999999999
Q ss_pred HHHhhcCCC-CCCCCCCCchHHHHHHHHHhCCCCCCCCCCccccCCCcccCCCCCCCceEEeeeEEecCCCcHHHHHHHH
Q psy12185 188 QEVIDCAGN-GNMGCSGGDFCALLDWMDVNKVVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSILTDI 266 (317)
Q Consensus 188 q~l~dC~~~-~~~gC~GG~~~~a~~y~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~~~~~~~~~~i~~al 266 (317)
|+|+||+.. ++.||+||++..||+|+.+ .||++|++|||.+.++.|...... ..++|++|..+. .+++++||++|
T Consensus 165 Q~LvdC~~~~g~~GC~GG~~~~a~~yi~~--~Gi~~e~~yPY~~~~~~C~~~~~~-~~~~i~~~~~v~-~~~e~~lk~al 240 (329)
T 3qt4_A 165 QNLIDCSSSYGNAGCDGGWMDSAFSYIHD--YGIMSESAYPYEAQGDYCRFDSSQ-SVTTLSGYYDLP-SGDENSLADAV 240 (329)
T ss_dssp HHHHHHCGGGTCCTTBCCCHHHHHHHHHH--SCBCBTTTSCCCSSCCCCCCCGGG-CCBCCSEEEECC-TTCHHHHHHHH
T ss_pred HHHHHhccccCCCCCCCCChhHHHHHHHH--cCCCcHHHeeeecCCCCCCCCccc-ceEEeceEEEec-CCCHHHHHHHH
Confidence 999999873 4789999999999999988 499999999999999999987665 677899998775 56899999999
Q ss_pred HhCCCeEEEEec-ccccccCCCeEeC-CCCCCCCCCCeEEEEEEeecCC--Cee
Q psy12185 267 ATHGPVIAAVNA-LTWQYYLGGVIQY-NCDGSLANINHAVQIVGYDNYS--RTW 316 (317)
Q Consensus 267 ~~~gPv~v~i~~-~~f~~Y~~GIy~~-~c~~~~~~~~Hav~iVGyg~~~--~~W 316 (317)
+++|||+|+|++ .+|++|++|||.. .|.... ++|||+|||||+++ +||
T Consensus 241 ~~~GPV~v~i~a~~~f~~Y~~GVy~~~~c~~~~--~~HaV~iVGyg~~~g~~yW 292 (329)
T 3qt4_A 241 GQAGPVAVAIDATDELQFYSGGLFYDQTCNQSD--LNHGVLVVGYGSDNGQDYW 292 (329)
T ss_dssp HHTCCEEEEECCCGGGTTEEEEEECCSSCCSSC--CCEEEEEEEEEEETTEEEE
T ss_pred HhCCCEEEEEecChhhhhccCceeecCCCCCCc--CCEEEEEEEEEeeCCccEE
Confidence 999999999999 7999999999987 686544 89999999999875 477
No 4
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A
Probab=100.00 E-value=7.2e-68 Score=486.87 Aligned_cols=265 Identities=26% Similarity=0.446 Sum_probs=220.7
Q ss_pred HHHHHHHHHHHHhCCccCch-hHHHHHHHHHHHHHHHHHHhhcC-CCCCCeEEecCcCCCCCHHHHHHhhhccccccccc
Q psy12185 32 QKLELFSSFQQRYKKSYSKS-EHDIRFKNFEKSLDIIEELNKNR-QSPESARYGITEFSDLSEEEFKTRHLRHSVNKHVL 109 (317)
Q Consensus 32 ~~~~~f~~~~~~~~K~Y~~~-E~~~R~~iF~~n~~~I~~~N~~~-~~~~~~~~g~N~fsD~t~eEf~~~~~~~~~~~~~~ 109 (317)
.+..+|++|+++|+|+|.+. |+.+|+.||++|+++|++||++. .+..+|++|+|+|+|||.+||++. +++... .+
T Consensus 6 ~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~FaDlt~eEf~~~-~~g~~~--~~ 82 (314)
T 1by8_A 6 ILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQK-MTGLKV--PL 82 (314)
T ss_dssp THHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSEEECCCTTSSSCHHHHHHH-SCCCCC--CS
T ss_pred HHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEEcccccccCCHHHHHHH-hccCCC--Cc
Confidence 35678999999999999887 99999999999999999999752 245789999999999999999654 333221 00
Q ss_pred ccCCCCCCCCCccccccccccCCCCCCCCCceeecccCCCCCCCcCCCCCccHHHHHHHHHHHHHHHHHcCCCccCCHHH
Q psy12185 110 MSHHKHHDHHHNHVKKRSITTGITIPTGIPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQE 189 (317)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~DwR~~g~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~~~~lS~q~ 189 (317)
........+.. ......||++||||++|+|+||||||.||||||||++++||++++|++++.+.||+|+
T Consensus 83 ~~~~~~~~~~~-----------~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFs~~~alE~~~~i~~g~~~~LSeq~ 151 (314)
T 1by8_A 83 SHSRSNDTLYI-----------PEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQN 151 (314)
T ss_dssp CCCCSSSSSBC-----------CCCSSCCCSCCBSTTTTCSCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHH
T ss_pred ccccCCccccc-----------cccccCCCCeEeCCCCCCCCCcccCCCCCCcHHHHHHHHHHHHHHHhcCCCcccCHHH
Confidence 00000000100 0011239999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCCCchHHHHHHHHHhCCCCCCCCCCccccCCCcccCCCCCCCceEEeeeEEecCCCcHHHHHHHHHhC
Q psy12185 190 VIDCAGNGNMGCSGGDFCALLDWMDVNKVVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSILTDIATH 269 (317)
Q Consensus 190 l~dC~~~~~~gC~GG~~~~a~~y~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~~~~~~~~~~i~~al~~~ 269 (317)
|+||+. .+.||+||++..||+|+.++ .||++|++|||.+.++.|...... ..++|++|..++ ..++++||++|+++
T Consensus 152 lvdC~~-~~~gC~GG~~~~a~~yi~~~-~Gi~~e~~yPY~~~~~~C~~~~~~-~~~~i~~~~~v~-~~~~~~i~~al~~~ 227 (314)
T 1by8_A 152 LVDCVS-ENDGCGGGYMTNAFQYVQKN-RGIDSEDAYPYVGQEESCMYNPTG-KAAKCRGYREIP-EGNEKALKRAVARV 227 (314)
T ss_dssp HHTTCT-TSCGGGCCCSHHHHHHHHHT-TCBCBTTTSCCCSSCCCCCCCGGG-CCBCCSCEEECC-SSCHHHHHHHHHHH
T ss_pred HHHhcC-CCCCCcCCCHHHHHHHHHHc-CCcCcHhhCCCCCCCCCcCCCCcc-ceeEECcEEEec-CCCHHHHHHHHHHc
Confidence 999997 78999999999999999854 799999999999999999876554 567889998765 46899999999999
Q ss_pred CCeEEEEec--ccccccCCCeEeC-CCCCCCCCCCeEEEEEEeecCC--Cee
Q psy12185 270 GPVIAAVNA--LTWQYYLGGVIQY-NCDGSLANINHAVQIVGYDNYS--RTW 316 (317)
Q Consensus 270 gPv~v~i~~--~~f~~Y~~GIy~~-~c~~~~~~~~Hav~iVGyg~~~--~~W 316 (317)
|||+|+|++ ++|++|++|||.. .|+... ++|||+|||||+++ +||
T Consensus 228 GPV~v~i~~~~~~f~~Y~~Gvy~~~~c~~~~--~~HaV~iVGyg~~~g~~yW 277 (314)
T 1by8_A 228 GPVSVAIDASLTSFQFYSKGVYYDESCNSDN--LNHAVLAVGYGIQKGNKHW 277 (314)
T ss_dssp CCEEEEECCCSHHHHTEEEECBCCTTCCSSC--CCEEEEEEEEEEETTEEEE
T ss_pred CCEEEEEEeChHHhhhccCceecCCCCCCCC--CCeEEEEEEEeccCCceEE
Confidence 999999999 4899999999987 487644 89999999999865 477
No 5
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens}
Probab=100.00 E-value=1.2e-67 Score=485.62 Aligned_cols=263 Identities=27% Similarity=0.466 Sum_probs=219.6
Q ss_pred HHHHHHHHHHHHhCCccCch-hHHHHHHHHHHHHHHHHHHhhcC-CCCCCeEEecCcCCCCCHHHHHHhhhccccccccc
Q psy12185 32 QKLELFSSFQQRYKKSYSKS-EHDIRFKNFEKSLDIIEELNKNR-QSPESARYGITEFSDLSEEEFKTRHLRHSVNKHVL 109 (317)
Q Consensus 32 ~~~~~f~~~~~~~~K~Y~~~-E~~~R~~iF~~n~~~I~~~N~~~-~~~~~~~~g~N~fsD~t~eEf~~~~~~~~~~~~~~ 109 (317)
.+..+|++|+.+|+|+|.+. |+.+|+.||++|+++|++||++. .+..+|++|+|+|+|||.|||++++ ++.... .
T Consensus 7 ~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~s~~~g~N~FaDlt~eEf~~~~-~g~~~~--~ 83 (315)
T 2c0y_A 7 TLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLM-SSLRVP--S 83 (315)
T ss_dssp GGHHHHHHHHHHHTCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCGGGGCCHHHHHHHT-TSBCCC--C
T ss_pred HHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEeccCccccCCHHHHHHHh-cCCCCC--c
Confidence 46778999999999999887 99999999999999999999752 3467899999999999999996543 332210 0
Q ss_pred ccCCCCCCCCCccccccccccCCCCCCCCCceeecccCCCCCCCcCCCCCccHHHHHHHHHHHHHHHHHcCCCccCCHHH
Q psy12185 110 MSHHKHHDHHHNHVKKRSITTGITIPTGIPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQE 189 (317)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~DwR~~g~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~~~~lS~q~ 189 (317)
.. .....+. .+...+||++||||++|+|+||||||.||||||||++++||++++|+++..+.||+|+
T Consensus 84 ~~-~~~~~~~------------~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAfs~~~alE~~~~i~~g~~~~LSeq~ 150 (315)
T 2c0y_A 84 QW-QRNITYK------------SNPNRILPDSVDWREKGCVTEVKYQGSCGAAWAFSAVGALEAQLKLKTGKLVSLSAQN 150 (315)
T ss_dssp GG-GSCBCC------------------CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHH
T ss_pred cc-cCCcccc------------CcccCCCCCeEecCCCCCcCCCcCcccCCCcHHHHHHHHHHHHHHHHhCCCcCcCHHH
Confidence 00 0000010 0112369999999999999999999999999999999999999999999999999999
Q ss_pred HhhcC-CC-CCCCCCCCchHHHHHHHHHhCCCCCCCCCCccccCCCcccCCCCCCCceEEeeeEEecCCCcHHHHHHHHH
Q psy12185 190 VIDCA-GN-GNMGCSGGDFCALLDWMDVNKVVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSILTDIA 267 (317)
Q Consensus 190 l~dC~-~~-~~~gC~GG~~~~a~~y~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~~~~~~~~~~i~~al~ 267 (317)
|+||+ .. ++.||+||++..||+|+.++ .||++|++|||.+.++.|...... ..++|++|..++ .+++++||++|+
T Consensus 151 lvdC~~~~~~~~gC~GG~~~~a~~yi~~~-~Gi~~e~~yPY~~~~~~C~~~~~~-~~~~i~~~~~v~-~~~~~~i~~al~ 227 (315)
T 2c0y_A 151 LVDCSTEKYGNKGCNGGFMTTAFQYIIDN-KGIDSDASYPYKAMDQKCQYDSKY-RAATCSKYTELP-YGREDVLKEAVA 227 (315)
T ss_dssp HHHHSCGGGTCCGGGCBCHHHHHHHHHHH-TCEEBTTTSCCCSSCCCCCCCGGG-EEECCCEEEECC-TTCHHHHHHHHH
T ss_pred HHhhcccccCCCCCCCCCHHHHHHHHHHh-CCcCchhcCCCccCCCCcccCCcc-cccccCCeEEeC-CCCHHHHHHHHH
Confidence 99998 32 48899999999999999854 799999999999999999876544 567889998765 468999999999
Q ss_pred hCCCeEEEEec--ccccccCCCeEeCC-CCCCCCCCCeEEEEEEeecCC--Cee
Q psy12185 268 THGPVIAAVNA--LTWQYYLGGVIQYN-CDGSLANINHAVQIVGYDNYS--RTW 316 (317)
Q Consensus 268 ~~gPv~v~i~~--~~f~~Y~~GIy~~~-c~~~~~~~~Hav~iVGyg~~~--~~W 316 (317)
++|||+|+|++ ++|++|++|||..+ |+. . ++|||+|||||+++ +||
T Consensus 228 ~~GPV~v~i~~~~~~f~~Y~~Gvy~~~~c~~-~--~~HaV~iVGyg~~~g~~yW 278 (315)
T 2c0y_A 228 NKGPVSVGVDARHPSFFLYRSGVYYEPSCTQ-N--VNHGVLVVGYGDLNGKEYW 278 (315)
T ss_dssp HTCCEEEEECCCSHHHHTEEEEEECCTTCCS-C--CCEEEEEEEEEEETTEEEE
T ss_pred HcCCEEEEEecCchhhhccCCCcccCCCCCC-c--CCEEEEEEEEeecCCCcEE
Confidence 99999999999 48999999999874 876 3 89999999999865 477
No 6
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1
Probab=100.00 E-value=4.5e-67 Score=482.91 Aligned_cols=263 Identities=31% Similarity=0.509 Sum_probs=219.7
Q ss_pred chHHHHHHHHHHHHHhCCccCch-hHHHHHHHHHHHHHHHHHHhhcCCCCCCeEEecCcCCCCCHHHHHHhhhccccccc
Q psy12185 29 NLEQKLELFSSFQQRYKKSYSKS-EHDIRFKNFEKSLDIIEELNKNRQSPESARYGITEFSDLSEEEFKTRHLRHSVNKH 107 (317)
Q Consensus 29 ~~~~~~~~f~~~~~~~~K~Y~~~-E~~~R~~iF~~n~~~I~~~N~~~~~~~~~~~g~N~fsD~t~eEf~~~~~~~~~~~~ 107 (317)
++..+..+|++|+++|+|+|.+. |+.+|+.||++|+++|++||+ .+.+|++|+|+|+|||.+||++++ ++...
T Consensus 14 ~e~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~---~~~~~~~g~N~FaDlt~eEf~~~~-~g~~~-- 87 (322)
T 1pci_A 14 STERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNK---KNNSYWLGLNEFADLSNDEFNEKY-VGSLI-- 87 (322)
T ss_dssp HHHHHHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHHHHHT---TCCSEEECSCTTTTSCHHHHHHHH-CCCBC--
T ss_pred chHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhhc---cCCceEEecCccccCCHHHHHHHh-cCCCC--
Confidence 33456789999999999999888 999999999999999999995 367899999999999999997543 33221
Q ss_pred ccccCCCCCCCCCccccccccccCCCCCCCCCceeecccCCCCCCCcCCCCCccHHHHHHHHHHHHHHHHHcCCCccCCH
Q psy12185 108 VLMSHHKHHDHHHNHVKKRSITTGITIPTGIPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSV 187 (317)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~DwR~~g~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~~~~lS~ 187 (317)
.... ..... +. ........||++||||++|+|+||||||.||||||||++++||++++|+++..+.||+
T Consensus 88 ~~~~-~~~~~--------~~--~~~~~~~~lP~~~DwR~~g~vt~VkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~lSe 156 (322)
T 1pci_A 88 DATI-EQSYD--------EE--FINEDIVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSE 156 (322)
T ss_dssp CCSS-CCCCS--------EE--CCCCCCCCSCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCH
T ss_pred cccc-ccccc--------cc--cccccccCCCCeEecccCCCCCCccccccCCccHHHHHHHHHHHHHHHHcCCccccCH
Confidence 0000 00000 00 0001234799999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCCCCCCCchHHHHHHHHHhCCCCCCCCCCccccCCCcccCCCCCCCceEEeeeEEecCCCcHHHHHHHHH
Q psy12185 188 QEVIDCAGNGNMGCSGGDFCALLDWMDVNKVVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSILTDIA 267 (317)
Q Consensus 188 q~l~dC~~~~~~gC~GG~~~~a~~y~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~~~~~~~~~~i~~al~ 267 (317)
|+|+||+. .+.||+||++..||+|+.+ .||++|++|||.+..+.|.........++|++|..++ .+++++||++|+
T Consensus 157 q~lvdC~~-~~~gC~GG~~~~a~~yi~~--~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~-~~~e~~l~~~l~ 232 (322)
T 1pci_A 157 QELVDCER-RSHGCKGGYPPYALEYVAK--NGIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQ-PNNEGNLLNAIA 232 (322)
T ss_dssp HHHHHSCT-TSCGGGCBCHHHHHHHHHH--HCBCBTTTSCCCSSCCCCTTTTCCSCCBCCCCEEECC-SSBHHHHHHHHH
T ss_pred HHHHhhcC-CCCCCCCCCHHHHHHHHHH--hCCCchhhCCCCCCCCCCCCCCCCCceEEEeeEEEeC-CCcHHHHHHHHH
Confidence 99999997 6899999999999999988 4899999999999999998764321467899998765 468999999998
Q ss_pred hCCCeEEEEec--ccccccCCCeEeCCCCCCCCCCCeEEEEEEeecCC--Cee
Q psy12185 268 THGPVIAAVNA--LTWQYYLGGVIQYNCDGSLANINHAVQIVGYDNYS--RTW 316 (317)
Q Consensus 268 ~~gPv~v~i~~--~~f~~Y~~GIy~~~c~~~~~~~~Hav~iVGyg~~~--~~W 316 (317)
+ |||+|+|++ ++|++|++|||.+.|+.. ++|||+|||||+++ +||
T Consensus 233 ~-GPV~v~i~~~~~~f~~Y~~Gvy~~~c~~~---~~HaV~iVGyg~~~g~~yW 281 (322)
T 1pci_A 233 K-QPVSVVVESKGRPFQLYKGGIFEGPCGTK---VDGAVTAVGYGKSGGKGYI 281 (322)
T ss_dssp H-SCEEEEECTTCHHHHTEEEEEECCSCCSC---CCEEEEEEEEEEETTEEEE
T ss_pred H-CCEEEEEecccccccccCCeEeCCCCCCC---CCEEEEEEEEeccCCccEE
Confidence 6 999999999 589999999998888753 79999999999875 477
No 7
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica}
Probab=100.00 E-value=5.9e-67 Score=479.99 Aligned_cols=259 Identities=28% Similarity=0.489 Sum_probs=217.1
Q ss_pred HHHHHHHHHhCCccCch-hHHHHHHHHHHHHHHHHHHhhcC-CCCCCeEEecCcCCCCCHHHHHHhhhcc-ccccccccc
Q psy12185 35 ELFSSFQQRYKKSYSKS-EHDIRFKNFEKSLDIIEELNKNR-QSPESARYGITEFSDLSEEEFKTRHLRH-SVNKHVLMS 111 (317)
Q Consensus 35 ~~f~~~~~~~~K~Y~~~-E~~~R~~iF~~n~~~I~~~N~~~-~~~~~~~~g~N~fsD~t~eEf~~~~~~~-~~~~~~~~~ 111 (317)
.+|++||.+|+|+|.+. |+.+| .||++|+++|++||++. .+..+|++|+|+|+|||.|||+++ +++ ... ....
T Consensus 3 ~~f~~~~~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~-~~g~~~~--~~~~ 78 (310)
T 2o6x_A 3 DLWHQWKRMYNKEYNGADDQHRR-NIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAK-YLTEMSR--ASDI 78 (310)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHTTSSSEEECCCTTTTSCHHHHHHH-HCCCCCC--GGGG
T ss_pred HHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHhhhccCCCcEEEeccccCCCCHHHHHHH-hcCCCCC--cccc
Confidence 57999999999999988 99999 99999999999999752 246789999999999999999654 333 211 0000
Q ss_pred CCCCCCCCCccccccccccCCCCCCCCCceeecccCCCCCCCcCCCCCccHHHHHHHHHHHHHHHHHcCCCccCCHHHHh
Q psy12185 112 HHKHHDHHHNHVKKRSITTGITIPTGIPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEVI 191 (317)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~DwR~~g~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~ 191 (317)
......+. .. ..+||++||||++|+|+||||||.||||||||++++||++++|+++..+.||+|+|+
T Consensus 79 ~~~~~~~~------------~~-~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAfa~~~alE~~~~i~~g~~~~LS~q~lv 145 (310)
T 2o6x_A 79 LSHGVPYE------------AN-NRAVPDKIDWRESGYVTEVKDQGNCGSGWAFSTTGTMEGQYMKNERTSISFSEQQLV 145 (310)
T ss_dssp SCSSEECC------------C-----CCSCEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSSCCCBCHHHHH
T ss_pred cccCCccc------------cc-cCCCCCeEecCcCCCCCCcccCCCCCccHHHHhHHHHHHHHHHHhCCCcCcCHHHHH
Confidence 00000000 01 126999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCC-CCCCCCCCchHHHHHHHHHhCCCCCCCCCCccccCCCcccCCCCCCCceEEeeeEEecCCCcHHHHHHHHHhCC
Q psy12185 192 DCAGN-GNMGCSGGDFCALLDWMDVNKVVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSILTDIATHG 270 (317)
Q Consensus 192 dC~~~-~~~gC~GG~~~~a~~y~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~~~~~~~~~~i~~al~~~g 270 (317)
||+.. ++.||+||++..||+|+.+ .||++|++|||.+.++.|...... ..++|++|..++ ..++++||++|+++|
T Consensus 146 dC~~~~~~~gC~GG~~~~a~~yi~~--~Gi~~e~~yPY~~~~~~C~~~~~~-~~~~i~~~~~v~-~~~~~~i~~~l~~~G 221 (310)
T 2o6x_A 146 DCSRPWGNNGCGGGLMENAYQYLKQ--FGLETESSYPYTAVEGQCRYNKQL-GVAKVTGFYTVH-SGSEVELKNLVGAEG 221 (310)
T ss_dssp HHCGGGTCCGGGCCCHHHHHHHHTT--SCBCBTTTSCCCSSCCCCCCCGGG-CCEEEEEEEEEC-SCCHHHHHHHHHHHC
T ss_pred HhhhccCCCCCCCCCHHHHHHHHHH--CCcCchhcCCCCCCCCCccCCCCC-CceEeCeEEEeC-CCCHHHHHHHHHhcC
Confidence 99863 4789999999999999984 799999999999999999876554 578999998775 468999999999999
Q ss_pred CeEEEEec-ccccccCCCeEeC-CCCCCCCCCCeEEEEEEeecCC--Cee
Q psy12185 271 PVIAAVNA-LTWQYYLGGVIQY-NCDGSLANINHAVQIVGYDNYS--RTW 316 (317)
Q Consensus 271 Pv~v~i~~-~~f~~Y~~GIy~~-~c~~~~~~~~Hav~iVGyg~~~--~~W 316 (317)
||+|+|++ ++|++|++|||.. .|+... ++|||+|||||+++ +||
T Consensus 222 PV~v~i~~~~~f~~Y~~Gvy~~~~c~~~~--~~HaV~iVGyg~~~g~~yW 269 (310)
T 2o6x_A 222 PAAVAVDVESDFMMYRSGIYQSQTCSPLR--VNHAVLAVGYGTQGGTDYW 269 (310)
T ss_dssp CEEEEECCCHHHHTEEEEEECCSSCCTTC--CCEEEEEEEEEEETTEEEE
T ss_pred CeEEEEecchhhhhCCCceecCCCCCCCC--CCEEEEEEEEeccCCceEE
Confidence 99999999 7999999999986 687644 89999999999875 477
No 8
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A*
Probab=100.00 E-value=1e-66 Score=479.67 Aligned_cols=261 Identities=27% Similarity=0.499 Sum_probs=218.7
Q ss_pred HHHHHHHHHHHHhCCccCch-hHHHHHHHHHHHHHHHHHHhhcC-CCCCCeEEecCcCCCCCHHHHHHhhhccccccccc
Q psy12185 32 QKLELFSSFQQRYKKSYSKS-EHDIRFKNFEKSLDIIEELNKNR-QSPESARYGITEFSDLSEEEFKTRHLRHSVNKHVL 109 (317)
Q Consensus 32 ~~~~~f~~~~~~~~K~Y~~~-E~~~R~~iF~~n~~~I~~~N~~~-~~~~~~~~g~N~fsD~t~eEf~~~~~~~~~~~~~~ 109 (317)
.+..+|++|+++|+|+| +. |+.+|+.||++|+++|++||++. .+..+|++|+|+|+|||.+||++. +++... +
T Consensus 7 ~~~~~f~~~~~~~~k~Y-~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~-~~g~~~---~ 81 (316)
T 1cs8_A 7 SLEAQWTKWKAMHNRLY-GMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQV-MNGFQN---R 81 (316)
T ss_dssp GGHHHHHHHHHHTTCCC-CTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHH-HCCBCC---C
T ss_pred HHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHHHHhhhccccCCcceEEccCccCCCCHHHHHHH-hcCCCC---C
Confidence 35678999999999999 66 99999999999999999999752 346789999999999999999653 333221 0
Q ss_pred ccCCCCCCCCCccccccccccCCCCCCCCCceeecccCCCCCCCcCCCCCccHHHHHHHHHHHHHHHHHcCCCccCCHHH
Q psy12185 110 MSHHKHHDHHHNHVKKRSITTGITIPTGIPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQE 189 (317)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~DwR~~g~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~~~~lS~q~ 189 (317)
... ....+. .+...+||++||||++|+|+||||||.||||||||++++||++++|++++.+.||+|+
T Consensus 82 ~~~-~~~~~~------------~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~ 148 (316)
T 1cs8_A 82 KPR-KGKVFQ------------EPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQN 148 (316)
T ss_dssp CCS-CCEECC------------CCTTCCCCSCEEGGGGTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHH
T ss_pred ccc-cCcccc------------CccccCCCCcEecCCCCCcCCCCcccCCccHHHHHHHHHHHHHHHHHcCCCcCcCHHH
Confidence 000 000000 0112469999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCC-CCCCCCCCchHHHHHHHHHhCCCCCCCCCCccccCCCcccCCCCCCCceEEeeeEEecCCCcHHHHHHHHHh
Q psy12185 190 VIDCAGN-GNMGCSGGDFCALLDWMDVNKVVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSILTDIAT 268 (317)
Q Consensus 190 l~dC~~~-~~~gC~GG~~~~a~~y~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~~~~~~~~~~i~~al~~ 268 (317)
|+||+.. ++.||+||++..||+|+.++ .||++|++|||.+.++.|...... ..++|++|..++ .++++||++|++
T Consensus 149 lvdC~~~~g~~gC~GG~~~~a~~yi~~~-~Gi~~e~~yPY~~~~~~C~~~~~~-~~~~i~~~~~v~--~~~~~ik~~l~~ 224 (316)
T 1cs8_A 149 LVDCSGPQGNEGCNGGLMDYAFQYVQDN-GGLDSEESYPYEATEESCKYNPKY-SVANDAGFVDIP--KQEKALMKAVAT 224 (316)
T ss_dssp HHHHCGGGTCCGGGCBCHHHHHHHHHHH-TCEEBTTTSCCCSSCCCCCCCGGG-EEECCCCEEECC--SCHHHHHHHHHH
T ss_pred HHHhccccCCCCCCCCCHHHHHHHHHHh-CCcCchhccCCCCCCCCcCCCCcc-ceeEeccEEEeC--CCHHHHHHHHHh
Confidence 9999863 47899999999999999743 799999999999999999876554 567889998765 389999999999
Q ss_pred CCCeEEEEec--ccccccCCCeEeC-CCCCCCCCCCeEEEEEEee---cC-C--Cee
Q psy12185 269 HGPVIAAVNA--LTWQYYLGGVIQY-NCDGSLANINHAVQIVGYD---NY-S--RTW 316 (317)
Q Consensus 269 ~gPv~v~i~~--~~f~~Y~~GIy~~-~c~~~~~~~~Hav~iVGyg---~~-~--~~W 316 (317)
+|||+|+|++ ++|++|++|||.. .|+... ++|||+||||| ++ + +||
T Consensus 225 ~GPV~v~i~~~~~~f~~Y~~Gvy~~~~c~~~~--~~HaV~iVGygd~~~~~~g~~yW 279 (316)
T 1cs8_A 225 VGPISVAIDAGHESFLFYKEGIYFEPDCSSED--MDHGVLVVGYGFESTESDNNKYW 279 (316)
T ss_dssp HCCEEEEECCCSHHHHTEEEEEECCTTCCSSC--CCEEEEEEEEEEECCSSCCEEEE
T ss_pred cCCEEEEEecCChhhccccCceECCCCCCCCC--CCEEEEEEEecCCcccCCCCcEE
Confidence 9999999999 3899999999987 487643 89999999999 65 3 477
No 9
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1
Probab=100.00 E-value=6.4e-63 Score=452.75 Aligned_cols=253 Identities=27% Similarity=0.445 Sum_probs=206.7
Q ss_pred HHHHHHHHHhCCccCch-hHHHHHHHHHHHHHHHHHHhhcCCCCCCeEEecCcCCCCCHHHHHHhhhcccccccccccCC
Q psy12185 35 ELFSSFQQRYKKSYSKS-EHDIRFKNFEKSLDIIEELNKNRQSPESARYGITEFSDLSEEEFKTRHLRHSVNKHVLMSHH 113 (317)
Q Consensus 35 ~~f~~~~~~~~K~Y~~~-E~~~R~~iF~~n~~~I~~~N~~~~~~~~~~~g~N~fsD~t~eEf~~~~~~~~~~~~~~~~~~ 113 (317)
.+|++|+++|+|.|.+. |+.+|+.||++|+++|++ | .+ |+|+|+|||.|||+++++ +.... .+...
T Consensus 6 ~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~-N---~~------g~N~F~Dlt~eEf~~~~~-~~~~~-~~~~~- 72 (312)
T 1xkg_A 6 KTFEEYKKAFNKSYATFEDEEAARKNFLESVKYVQS-N---GG------AINHLSDLSLDEFKNRFL-MSAEA-FEHLK- 72 (312)
T ss_dssp CSHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHH-H---CC------CCCTTTTSCHHHHHHHHS-BCHHH-HHHHH-
T ss_pred HHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHh-c---cC------CCCcccCCCHHHHHHHhc-CCCCc-ccccc-
Confidence 35999999999999987 999999999999999999 8 22 999999999999975433 32110 00000
Q ss_pred CCCCCCCccccccccccCCCCCCCCCceeecccCCCCCCCcCCCCCccHHHHHHHHHHHHHHHHHcCCCccCCHHHHhhc
Q psy12185 114 KHHDHHHNHVKKRSITTGITIPTGIPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEVIDC 193 (317)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~lP~~~DwR~~g~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC 193 (317)
....+...... .....+||++||||++|+|+||||||.||||||||++++||++++|+++..+.||+|+|+||
T Consensus 73 ~~~~~~~~~~~-------~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC 145 (312)
T 1xkg_A 73 TQFDLNAETNA-------CSINGNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRDQSLDLAEQELVDC 145 (312)
T ss_dssp HHHC-----CB-------CCCCSCCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHH
T ss_pred CCccccccccc-------ccccccCCCccccccCCCcCCccccCCCCccHHHHHHHHHHHHHHHHhCCCCCcCHHHHHhc
Confidence 00000000000 00123799999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCchHHHHHHHHHhCCCCCCCCCCccccCCCcccCCCCCCCceEEeeeEEecCCCcHHHHHHHHHh-CCCe
Q psy12185 194 AGNGNMGCSGGDFCALLDWMDVNKVVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSILTDIAT-HGPV 272 (317)
Q Consensus 194 ~~~~~~gC~GG~~~~a~~y~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~~~~~~~~~~i~~al~~-~gPv 272 (317)
+. ..||+||++..||+|+.+ .||++|++|||.+..+.|. .... ..++|++|..++ ..++++||++|++ +|||
T Consensus 146 ~~--~~GC~GG~~~~a~~yi~~--~Gi~~e~~yPY~~~~~~C~-~~~~-~~~~i~~y~~v~-~~~~~~ik~al~~~~GPV 218 (312)
T 1xkg_A 146 AS--QHGCHGDTIPRGIEYIQH--NGVVQESYYRYVAREQSCR-RPNA-QRFGISNYCQIY-PPNANKIREALAQTHSAI 218 (312)
T ss_dssp TC--SSTTBCCCHHHHHHHHHH--HCEEBGGGSCCCSSCCCCC-CCSS-CEECCSEEEECC-SCCHHHHHHHHHHHCCCE
T ss_pred cC--CCCCCCCCHHHHHHHHHH--cCCCccccCCccCCCCCCC-CCCC-ceEEEeeEEEeC-CCCHHHHHHHHHhcCCCE
Confidence 82 389999999999999987 6999999999999999999 5444 568899998765 4689999999999 9999
Q ss_pred EEEEec-c--cccccCCCeEeC-CCCCCCCCCCeEEEEEEeecCC--Cee
Q psy12185 273 IAAVNA-L--TWQYYLGGVIQY-NCDGSLANINHAVQIVGYDNYS--RTW 316 (317)
Q Consensus 273 ~v~i~~-~--~f~~Y~~GIy~~-~c~~~~~~~~Hav~iVGyg~~~--~~W 316 (317)
+|+|++ . +|++|++|||.. .|+... . +|||+|||||+++ +||
T Consensus 219 ~v~i~~~~~~~f~~Y~~GVy~~~~c~~~~-~-~HaV~iVGyg~~~g~~yW 266 (312)
T 1xkg_A 219 AVIIGIKDLDAFRHYDGRTIIQRDNGYQP-N-YHAVNIVGYSNAQGVDYW 266 (312)
T ss_dssp EEEEEESCHHHHHTCCSSSCBCCCCSSCC-E-EEEEEEEEEEEETTEEEE
T ss_pred EEEEEecccccccccCCcEEcCCCCCCCc-C-ceEEEEEEEeccCCceEE
Confidence 999999 6 899999999987 686222 3 9999999999875 477
No 10
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C*
Probab=100.00 E-value=1.7e-57 Score=433.01 Aligned_cols=245 Identities=22% Similarity=0.329 Sum_probs=152.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcCCCCCCeEEe-cCcCCCCCHHHHHHhhhcccccccccccCCCCCCCCCcccccccccc
Q psy12185 52 EHDIRFKNFEKSLDIIEELNKNRQSPESARYG-ITEFSDLSEEEFKTRHLRHSVNKHVLMSHHKHHDHHHNHVKKRSITT 130 (317)
Q Consensus 52 E~~~R~~iF~~n~~~I~~~N~~~~~~~~~~~g-~N~fsD~t~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (317)
|+.+|++||++|+++|++||+ ...+|++| +|+|+|||.|||+++++ +.... .+. ....+....
T Consensus 136 ~~~~R~~if~~N~~~I~~~N~---~~~~~~~~~~n~faDlT~eEf~~~~~-~~~~~-~~~--~~~~~~~~~--------- 199 (441)
T 3pdf_A 136 QEKYSNRLYKYDHNFVKAINA---IQKSWTATTYMEYETLTLGDMIRRSG-GHSRK-IPR--PKPAPLTAE--------- 199 (441)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hHHHHHHHHHHHHHHHHHHHc---cCCceEeecccccccCCHHHHHHHhC-CCccc-ccc--cccCccccc---------
Confidence 778899999999999999995 45689998 89999999999965432 21110 000 000000000
Q ss_pred CCCCCCCCCceeecccCC---CCCCCcCCCCCccHHHHHHHHHHHHHHHHHcCCCc--cCCHHHHhhcCCCCCCCCCCCc
Q psy12185 131 GITIPTGIPVKKDWREAG---IIGKVRNQQTCGACWAFSTVETAESMHALKNGTLS--LLSVQEVIDCAGNGNMGCSGGD 205 (317)
Q Consensus 131 ~~~~~~~lP~~~DwR~~g---~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~~~--~lS~q~l~dC~~~~~~gC~GG~ 205 (317)
......+||++||||+++ +|+||||||.||||||||++++||++++|+++... .||+|+|+||+. .+.||+||+
T Consensus 200 ~~~~~~~lP~s~DwR~~~g~~~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~~~LSeQ~LvdC~~-~~~GC~GG~ 278 (441)
T 3pdf_A 200 IQQKILFLPTSWDWRNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSQ-YAQGCEGGF 278 (441)
T ss_dssp ------CCCSCEETTCBTTBCCSCCCCBCTTSBCHHHHHHHHHHHHHHHHHHTTSCCCCBCHHHHHHHCT-TSCTTBCCC
T ss_pred cccccccCCCCEECCcCCCCCccCcccccCCCchHHHHHHHHHHHHHHHHhccCCCccccCHHHHHhhcc-CCCCCCCCc
Confidence 001235799999999863 89999999999999999999999999999999654 599999999997 689999999
Q ss_pred hHHH-HHHHHHhCCCCCCCCCCccccCCCcccCCCCCCCceEEeeeEEecC---CCcHHHHHHHHHhCCCeEEEEec-cc
Q psy12185 206 FCAL-LDWMDVNKVVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTL---IPSESSILTDIATHGPVIAAVNA-LT 280 (317)
Q Consensus 206 ~~~a-~~y~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~~~~---~~~~~~i~~al~~~gPv~v~i~~-~~ 280 (317)
+..+ ++|+.+ .||++|++|||.+.++.|...... ..+.+.+|..+.. ..++++||++|+++|||+|+|++ ++
T Consensus 279 ~~~aa~~yi~~--~Gi~tE~~yPY~~~~~~C~~~~~~-~~~~~~~y~~v~~~~~~~~e~~ik~al~~~GPVsvai~a~~~ 355 (441)
T 3pdf_A 279 PYLIAGKYAQD--FGLVEEACFPYTGTDSPCKMKEDC-FRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDD 355 (441)
T ss_dssp HHHHTTHHHHH--TCBCBGGGSCCCSSCCCSCCCSSC-CCBCEEEEEETTSSTTCCCHHHHHHHHHHHCCEEEEECCCGG
T ss_pred hhHHHHHHHHh--cCCCcHHHeeecccCCCCCCcccc-ceeeeccEEEeCCccCCCcHHHHHHHHHHCCCeEEEEEeccc
Confidence 9987 899987 699999999999999999986655 5677888876531 35789999999999999999999 89
Q ss_pred ccccCCCeEeCC-CCC---CCCCCCeEEEEEEeecCC----Cee
Q psy12185 281 WQYYLGGVIQYN-CDG---SLANINHAVQIVGYDNYS----RTW 316 (317)
Q Consensus 281 f~~Y~~GIy~~~-c~~---~~~~~~Hav~iVGyg~~~----~~W 316 (317)
|++|++|||.+. |.. ....++|||+|||||++. +||
T Consensus 356 F~~Y~sGVy~~~~~~~~~~~~~~~~HaV~iVGyG~~~~~G~~YW 399 (441)
T 3pdf_A 356 FLHYKKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDSASGMDYW 399 (441)
T ss_dssp GGGCCSSEECCC---CCCCCCCCCCEEEEEEEEEECTTTCCEEE
T ss_pred ccccCCceEecCCCCcccCCCCcCCeEEEEEEecccCCCCceEE
Confidence 999999999873 322 112389999999999852 477
No 11
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A*
Probab=100.00 E-value=4e-56 Score=410.16 Aligned_cols=238 Identities=19% Similarity=0.274 Sum_probs=148.5
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCeEEecC-cCCCCCHHHHHHhhhccccccccccc--CCCCCCCCCcccccccccc
Q psy12185 54 DIRFKNFEKSLDIIEELNKNRQSPESARYGIT-EFSDLSEEEFKTRHLRHSVNKHVLMS--HHKHHDHHHNHVKKRSITT 130 (317)
Q Consensus 54 ~~R~~iF~~n~~~I~~~N~~~~~~~~~~~g~N-~fsD~t~eEf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 130 (317)
+.|+..+..|.++|++||++ .+.+|++|+| +|+|||.|||++ +++... .+.. .....++. .
T Consensus 2 ~~~~~a~~~~~~~i~~~N~~--~~~~~~~~~n~~f~dlt~eE~~~--~~g~~~--~~~~~~~~~~~~~~----~------ 65 (325)
T 3hhi_A 2 LVAEDAPVLSKAFVDRVNRL--NRGIWKAKYDGVMQNITLREAKR--LNGVIK--KNNNASILPKRRFT----E------ 65 (325)
T ss_dssp ------------------------------------------------------------CCSCBCCCC----H------
T ss_pred CcccccccccHHHHHHHHhC--CCCceEEecccccccCCHHHHHH--HhCCCC--CCcccccccCcccc----c------
Confidence 45777888899999999953 3578999999 899999999954 344322 1110 00000000 0
Q ss_pred CCCCCCCCCceeecccC----CCCCCCcCCCCCccHHHHHHHHHHHHHHHHHcCC-CccCCHHHHhhcCCCCCCCCCCCc
Q psy12185 131 GITIPTGIPVKKDWREA----GIIGKVRNQQTCGACWAFSTVETAESMHALKNGT-LSLLSVQEVIDCAGNGNMGCSGGD 205 (317)
Q Consensus 131 ~~~~~~~lP~~~DwR~~----g~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~-~~~lS~q~l~dC~~~~~~gC~GG~ 205 (317)
.....+||++||||++ |.|+||||||.||||||||++++||++++|+++. .+.||+|+|+||+...+.||+||+
T Consensus 66 -~~~~~~lP~s~DwR~~w~~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~~~~~~~LSeQ~LvdC~~~~~~GC~GG~ 144 (325)
T 3hhi_A 66 -EEARAPLPSSFDSAEAWPNCPTIPQIADQSACGSCWAVAAASAMSDRFCTMGGVQDVHISAGDLLACCSDCGDGCNGGD 144 (325)
T ss_dssp -HHHHCCCCSCEEHHHHSTTCTTTTCCCBCCSSBCHHHHHHHHHHHHHHHHTSSCSSCCBCHHHHHHHCGGGBCTTBCBC
T ss_pred -cccccCCCCcEehhHhcCCCCccccccCCCCccccHHHHHHHHHHHHHHHHhCCCccccCHHHHHHhccCCCCCCCCCC
Confidence 0112579999999987 8999999999999999999999999999999997 899999999999874578999999
Q ss_pred hHHHHHHHHHhCCCCCCCCCCccc-cC----------CCcccCC-------------CC--CCCceEEeeeEEecCCCcH
Q psy12185 206 FCALLDWMDVNKVVLEPESEYPLL-LK----------DAACKRK-------------AT--SPNGVKIKSYTCDTLIPSE 259 (317)
Q Consensus 206 ~~~a~~y~~~~~~Gi~~e~~yPY~-~~----------~~~C~~~-------------~~--~~~~~~i~~~~~~~~~~~~ 259 (317)
+..||+|+.+ .||++|++|||. +. .+.|... .. ......+.+|. + .++
T Consensus 145 ~~~A~~yi~~--~Gi~~e~~yPY~~~~c~~~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~y~-v---~~~ 218 (325)
T 3hhi_A 145 PDRAWAYFSS--TGLVSDYCQPYPFPHCSHHSKSKNGYPPCSQFNFDTPKCDYTCDDPTIPVVNYRSWTSYA-L---QGE 218 (325)
T ss_dssp HHHHHHHHHH--TCBCBTTTSCCSSCCCBSSSCCTTCCCBGGGCCCCCCCCCSSCSSTTSCCCCBCEEEEEE-E---CSH
T ss_pred HHHHHHHHHH--hCCCcccccCCccccccccccccccCCCCCCcccCCcchhhcccccccccceEEeecceE-e---CCH
Confidence 9999999988 599999999998 32 2567610 00 00123456775 3 689
Q ss_pred HHHHHHHHhCCCeEEEEec-ccccccCCCeEeCCCCCCCCCCCeEEEEEEeecCCC--ee
Q psy12185 260 SSILTDIATHGPVIAAVNA-LTWQYYLGGVIQYNCDGSLANINHAVQIVGYDNYSR--TW 316 (317)
Q Consensus 260 ~~i~~al~~~gPv~v~i~~-~~f~~Y~~GIy~~~c~~~~~~~~Hav~iVGyg~~~~--~W 316 (317)
++||++|+++|||+|+|++ ++|++|++|||...|+... ++|||+|||||+++| ||
T Consensus 219 ~~i~~~i~~~GPV~v~i~~~~~f~~Y~~GVy~~~~~~~~--~~HaV~iVGyG~~~g~~YW 276 (325)
T 3hhi_A 219 DDYMRELFFRGPFEVAFDVYEDFIAYNSGVYHHVSGQYL--GGHAVRLVGWGTSNGVPYW 276 (325)
T ss_dssp HHHHHHHHHHCCEEEEEEEEHHHHTCCSSEECCCSCCEE--EEEEEEEEEEEEETTEEEE
T ss_pred HHHHHHHHHCCCEEEEEEeccccccccCceecCCCCCCC--CCEEEEEEEEEecCCceEE
Confidence 9999999999999999999 8999999999988665443 699999999998764 77
No 12
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A
Probab=100.00 E-value=1.3e-52 Score=386.00 Aligned_cols=226 Identities=24% Similarity=0.389 Sum_probs=174.5
Q ss_pred HHHHHHHHhhcCCCCCCeEEecCcCCCCCHHHHHHhhhcccccccccccCCCCCCCCCccccccccccCCCCCCCCCcee
Q psy12185 63 SLDIIEELNKNRQSPESARYGITEFSDLSEEEFKTRHLRHSVNKHVLMSHHKHHDHHHNHVKKRSITTGITIPTGIPVKK 142 (317)
Q Consensus 63 n~~~I~~~N~~~~~~~~~~~g~N~fsD~t~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~ 142 (317)
+.++|++||+ .+.+|++|+| |+|++.||++ .+++... .+.. ...++ ......+||++|
T Consensus 11 ~~~~i~~~N~---~~~~~~~~~n-f~~~~~e~~~--~~lg~~~--~~~~--~~~~~------------~~~~~~~lP~s~ 68 (317)
T 3pbh_A 11 SDELVNYVNK---RNTTWQAGHN-FYNVDMSYLK--RLCGTFL--GGPK--PPQRV------------MFTEDLKLPASF 68 (317)
T ss_dssp CHHHHHHHHH---HTCSEEECCC-CSSCCHHHHH--HTCCBCT--TCCC--CSEEE------------CCCSCCCCCSSE
T ss_pred cHHHHHHHHC---CCCCeEEeec-cccCCHHHHH--HHcCCCC--Cccc--cCccc------------ccccccCCCCCE
Confidence 4678999995 4678999999 9999998883 4555432 1110 00000 001135799999
Q ss_pred ecccC----CCCCCCcCCCCCccHHHHHHHHHHHHHHHHHcCC--CccCCHHHHhhcCC-CCCCCCCCCchHHHHHHHHH
Q psy12185 143 DWREA----GIIGKVRNQQTCGACWAFSTVETAESMHALKNGT--LSLLSVQEVIDCAG-NGNMGCSGGDFCALLDWMDV 215 (317)
Q Consensus 143 DwR~~----g~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~--~~~lS~q~l~dC~~-~~~~gC~GG~~~~a~~y~~~ 215 (317)
|||++ |.|+||||||.||||||||++++||++++|+++. .+.||+|+|+||+. ..+.||+||++..||+|+.+
T Consensus 69 DwR~~~~~c~~vtpVkdQg~CGSCWAFsa~~ale~~~~i~~~~~~~~~LSeq~LvdC~~~~~~~GC~GG~~~~A~~yi~~ 148 (317)
T 3pbh_A 69 DAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTR 148 (317)
T ss_dssp EHHHHCTTCGGGTCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHSCTTTBCGGGCBCHHHHHHHHHH
T ss_pred echhccCCCCCcCCccccCCccchHHHHHHHHHHHHHHHHhCCCCcccCCHHHHHHhccccCCCCCCCCCHHHHHHHHHH
Confidence 99986 6899999999999999999999999999999874 89999999999986 46789999999999999988
Q ss_pred hCCCCCCCCCC-------cccc---------CCCcccCCCCC-------CCceEE-----eee----EEecCCCcHHHHH
Q psy12185 216 NKVVLEPESEY-------PLLL---------KDAACKRKATS-------PNGVKI-----KSY----TCDTLIPSESSIL 263 (317)
Q Consensus 216 ~~~Gi~~e~~y-------PY~~---------~~~~C~~~~~~-------~~~~~i-----~~~----~~~~~~~~~~~i~ 263 (317)
.||++|.+| ||.. ..+.|...... ...+.+ +.| ..+ ..++++||
T Consensus 149 --~Gi~te~~Y~~~~~c~PY~~~~c~~~~~~~~~~C~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~v--~~~e~~i~ 224 (317)
T 3pbh_A 149 --KGLVSGGLYESHVGCRPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSV--SNSEKDIM 224 (317)
T ss_dssp --TCEEBBCSTTCCCBSSCCCSCCCCCCCTTCCSCCCSCCCCCCCCCSCCSSCCSCGGGSEECBCCCEEE--CSCHHHHH
T ss_pred --hCCCcchhccCCCCCcCcccCcccccccCcCCCCCCcCCCCcccccccCCCccceeeeeeeeeecccC--CcHHHHHH
Confidence 599999888 9984 34567531000 001111 111 223 36899999
Q ss_pred HHHHhCCCeEEEEec-ccccccCCCeEeCCCCCCCCCCCeEEEEEEeecCCC--ee
Q psy12185 264 TDIATHGPVIAAVNA-LTWQYYLGGVIQYNCDGSLANINHAVQIVGYDNYSR--TW 316 (317)
Q Consensus 264 ~al~~~gPv~v~i~~-~~f~~Y~~GIy~~~c~~~~~~~~Hav~iVGyg~~~~--~W 316 (317)
++|+++|||+|+|++ ++|++|++|||.+.|+... ++|||+|||||+++| ||
T Consensus 225 ~~i~~~GPV~v~i~~~~~f~~Y~~GVy~~~~~~~~--~~HaV~iVGyG~~~g~~YW 278 (317)
T 3pbh_A 225 AEIYKNGPVEGAFSVYSDFLLYKSGVYQHVTGEMM--GGHAIRILGWGVENGTPYW 278 (317)
T ss_dssp HHHHHHCCEEEEEEEEGGGGGEEEEEECCCSCCEE--EEEEEEEEEEEEETTEEEE
T ss_pred HHHHHCCCEEEEEEecccccCCCCcEEccCCCCCC--CCEEEEEEEEEEeCCeeEE
Confidence 999999999999999 9999999999998776543 699999999998764 77
No 13
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ...
Probab=100.00 E-value=4.7e-50 Score=350.58 Aligned_cols=173 Identities=33% Similarity=0.629 Sum_probs=157.2
Q ss_pred CCceeecccCCCCCCCcCCCCCccHHHHHHHHHHHHHHHHHcCCCccCCHHHHhhcCCCCCCCCCCCchHHHHHHHHHhC
Q psy12185 138 IPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEVIDCAGNGNMGCSGGDFCALLDWMDVNK 217 (317)
Q Consensus 138 lP~~~DwR~~g~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~gC~GG~~~~a~~y~~~~~ 217 (317)
||++||||++|+|+||||||.||||||||+++++|++++++++..+.||+|+|+||+. .+.||+||++..|++|+.++
T Consensus 1 lP~~~Dwr~~~~v~pvkdQg~cGsCWAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~-~~~gC~GG~~~~a~~~~~~~- 78 (215)
T 3kwz_A 1 APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS-ENDGCGGGYMTNAFQYVQKN- 78 (215)
T ss_dssp CTTCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHH-
T ss_pred CCCCCccCcCCCCCCcccCCCCcHHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcC-CCCCCCCCCHHHHHHHHHHh-
Confidence 6999999999999999999999999999999999999999999999999999999997 78999999999999999874
Q ss_pred CCCCCCCCCccccCCCcccCCCCCCCceEEeeeEEecCCCcHHHHHHHHHhCCCeEEEEec--ccccccCCCeEeC-CCC
Q psy12185 218 VVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSILTDIATHGPVIAAVNA--LTWQYYLGGVIQY-NCD 294 (317)
Q Consensus 218 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~~~~~~~~~~i~~al~~~gPv~v~i~~--~~f~~Y~~GIy~~-~c~ 294 (317)
.|+++|++|||.+.++.|...... ...++++|..+. ..++++||++|+++|||+|+|++ ++|++|++|||.. .|.
T Consensus 79 ~Gi~~e~~yPY~~~~~~C~~~~~~-~~~~i~~~~~v~-~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~ 156 (215)
T 3kwz_A 79 RGIDSEDAYPYVGQEESCMYNPTG-KAAKCRGYREIP-EGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCN 156 (215)
T ss_dssp TCEEBTTTSCCCSSCCCCCCCGGG-EEECCCCEEECC-TTCHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTCC
T ss_pred CCccccccCCCccCCCccccCCCC-ceeEecceEEeC-CCCHHHHHHHHHHCCCEEEEEeechhhhhcccCCeECCCCCC
Confidence 599999999999999999876655 567888998765 45899999999999999999999 4899999999987 686
Q ss_pred CCCCCCCeEEEEEEeecCC--Cee
Q psy12185 295 GSLANINHAVQIVGYDNYS--RTW 316 (317)
Q Consensus 295 ~~~~~~~Hav~iVGyg~~~--~~W 316 (317)
... ++|||+|||||+++ +||
T Consensus 157 ~~~--~~HaV~iVGyg~~~g~~yW 178 (215)
T 3kwz_A 157 SDN--LNHAVLAVGYGIQKGNKHW 178 (215)
T ss_dssp TTC--CCEEEEEEEEEEETTEEEE
T ss_pred CCh--hhCEEEEEEEeccCCceEE
Confidence 544 89999999999765 366
No 14
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1
Probab=100.00 E-value=1.1e-49 Score=349.39 Aligned_cols=172 Identities=34% Similarity=0.641 Sum_probs=155.4
Q ss_pred CCCceeecccCCCCCCCcCCCCCccHHHHHHHHHHHHHHHHHcCCCccCCHHHHhhcCCCCCCCCCCCchHHHHHHHHHh
Q psy12185 137 GIPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEVIDCAGNGNMGCSGGDFCALLDWMDVN 216 (317)
Q Consensus 137 ~lP~~~DwR~~g~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~gC~GG~~~~a~~y~~~~ 216 (317)
+||++||||++|+|+||||||.||||||||++++||++++|+++..+.||+|+|+||+. .+.||+||++..||+|+.++
T Consensus 2 ~lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~y~~~~ 80 (221)
T 1cqd_A 2 DLPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTT-ANHGCRGGWMNPAFQFIVNN 80 (221)
T ss_dssp -CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHH
T ss_pred CCCCcCcCCCCCCcCCcccCCCCccHHHHHHHHHHHHHHHHhcCCeeeeccceeEECCC-CCCCCCCCCHHHHHHHHHHh
Confidence 58999999999999999999999999999999999999999999999999999999997 57899999999999999874
Q ss_pred CCCCCCCCCCccccCCCcccCCCCCCCceEEeeeEEecCCCcHHHHHHHHHhCCCeEEEEec--ccccccCCCeEeCCCC
Q psy12185 217 KVVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSILTDIATHGPVIAAVNA--LTWQYYLGGVIQYNCD 294 (317)
Q Consensus 217 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~~~~~~~~~~i~~al~~~gPv~v~i~~--~~f~~Y~~GIy~~~c~ 294 (317)
.|+++|++|||.+.++.|...... ..++|++|..+. ..++++||++|++ |||+|+|++ ++|++|++|||+..|+
T Consensus 81 -~Gi~~e~~yPY~~~~~~C~~~~~~-~~~~i~~y~~v~-~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Giy~~~~~ 156 (221)
T 1cqd_A 81 -GGINSEETYPYRGQDGICNSTVNA-PVVSIDSYENVP-SHNEQSLQKAVAN-QPVSVTMDAAGRDFQLYRSGIFTGSCN 156 (221)
T ss_dssp -TSBCBTTTSCCCSSCCCCCSSSCC-CSBCCSEEEECC-SSCHHHHHHHHTT-SCEEEEECCCSHHHHTCCSSEECCCCC
T ss_pred -CCccccccCCccCCCCCcCCCCCC-ceEEeccEEEeC-CchHHHHHHHHHh-CCEEEEEeccCcccccccCccccCCCC
Confidence 699999999999999999876554 578899998765 4578999999975 999999999 4899999999998887
Q ss_pred CCCCCCCeEEEEEEeecCC--Cee
Q psy12185 295 GSLANINHAVQIVGYDNYS--RTW 316 (317)
Q Consensus 295 ~~~~~~~Hav~iVGyg~~~--~~W 316 (317)
.. ++|||+|||||+++ +||
T Consensus 157 ~~---~~HaV~iVGyg~~~g~~yW 177 (221)
T 1cqd_A 157 IS---ANHALTVVGYGTENDKDFW 177 (221)
T ss_dssp CC---CCEEEEEEEEEEETTEEEE
T ss_pred Cc---CCeEEEEEEEcccCCCcEE
Confidence 53 79999999999876 467
No 15
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1
Probab=100.00 E-value=8.8e-50 Score=348.45 Aligned_cols=172 Identities=34% Similarity=0.551 Sum_probs=154.6
Q ss_pred CCceeecccCCCCCCCcCCCCCccHHHHHHHHHHHHHHHHHcCCCccCCHHHHhhcCCCCCCCCCCCchHHHHHHHHHhC
Q psy12185 138 IPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEVIDCAGNGNMGCSGGDFCALLDWMDVNK 217 (317)
Q Consensus 138 lP~~~DwR~~g~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~gC~GG~~~~a~~y~~~~~ 217 (317)
||++||||++|+|+||||||.||||||||++++||++++|+++..++||||+|+||+. .+.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~vt~VkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~~i~~~- 78 (214)
T 1m6d_A 1 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDK-MDKACMGGLPSNAYSAIKNL- 78 (214)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCS-SSCTTBCCCHHHHHHHHHHH-
T ss_pred CCCcCcCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcC-CCCCCCCCCHHHHHHHHHHh-
Confidence 6999999999999999999999999999999999999999999999999999999987 57899999999999999874
Q ss_pred CCCCCCCCCccccCCCcccCCCCCCCceEEeeeEEecCCCcHHHHHHHHHhCCCeEEEEecccccccCCCeEeC---CCC
Q psy12185 218 VVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSILTDIATHGPVIAAVNALTWQYYLGGVIQY---NCD 294 (317)
Q Consensus 218 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~~~~~~~~~~i~~al~~~gPv~v~i~~~~f~~Y~~GIy~~---~c~ 294 (317)
.|+++|++|||.+..+.|...... ..+++.++..+. .++++||++|+++|||+|+|++.+|++|++|||+. .|+
T Consensus 79 ~Gi~~e~~yPY~~~~~~C~~~~~~-~~~~i~~~~~i~--~~~~~ik~~l~~~GPV~v~i~~~~f~~Y~~Giy~~~~~~c~ 155 (214)
T 1m6d_A 79 GGLETEDDYSYQGHMQSCQFSAEK-AKVYIQDSVELS--QNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCS 155 (214)
T ss_dssp TCBCBTTTSCCCSSCCCCCCCGGG-CCBCCSEEEECC--SCHHHHHHHHHHHCCEEEEECTHHHHHCCSSEECCCGGGSC
T ss_pred cCcccccCcCcCCCCCcCCCCccc-ceEEecCEEEeC--hHHHHHHHHHHhCCCEEEEEEechhhhcCCceecCCCCcCC
Confidence 599999999999999999876554 456788887654 58899999999999999999996699999999985 376
Q ss_pred CCCCCCCeEEEEEEeecCCC--ee
Q psy12185 295 GSLANINHAVQIVGYDNYSR--TW 316 (317)
Q Consensus 295 ~~~~~~~Hav~iVGyg~~~~--~W 316 (317)
... ++|||+|||||++++ ||
T Consensus 156 ~~~--~~HaV~iVGyg~~~g~~yW 177 (214)
T 1m6d_A 156 PWL--IDHAVLLVGYGQRSDVPFW 177 (214)
T ss_dssp TTC--CCEEEEEEEEEEETTEEEE
T ss_pred CCc--CCEEEEEEEEeecCCcEEE
Confidence 544 899999999998764 77
No 16
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ...
Probab=100.00 E-value=1.9e-49 Score=346.60 Aligned_cols=172 Identities=31% Similarity=0.645 Sum_probs=152.9
Q ss_pred CCceeecccCCCCCCCcCCCCCccHHHHHHHHHHHHHHHHHcCCCccCCHHHHhhcCCCCCCCCCCCchHHHHHHHHHh-
Q psy12185 138 IPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEVIDCAGNGNMGCSGGDFCALLDWMDVN- 216 (317)
Q Consensus 138 lP~~~DwR~~g~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~gC~GG~~~~a~~y~~~~- 216 (317)
||++||||++|+|+||||||.||||||||++++||++++|+++..++||+|+|+||+. .+.||+||++..||+|+.++
T Consensus 1 lP~~~Dwr~~g~vtpVkdQg~cGsCWAfa~~~ale~~~~i~~~~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~y~~~~~ 79 (215)
T 3i06_A 1 APAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDK-TDSGCSGGLMNNAFEWIVQEN 79 (215)
T ss_dssp CCSEEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHTTSCCCCCCHHHHHHHCS-SSCGGGCCCHHHHHHHHHHHS
T ss_pred CCCcccCCcCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCccCHHHHhccCC-CCCCCCCCCHHHHHHHHHHhc
Confidence 6999999999999999999999999999999999999999999999999999999987 68999999999999999874
Q ss_pred CCCCCCCCCCccccCCC---cccCCCCCCCceEEeeeEEecCCCcHHHHHHHHHhCCCeEEEEecccccccCCCeEeCCC
Q psy12185 217 KVVLEPESEYPLLLKDA---ACKRKATSPNGVKIKSYTCDTLIPSESSILTDIATHGPVIAAVNALTWQYYLGGVIQYNC 293 (317)
Q Consensus 217 ~~Gi~~e~~yPY~~~~~---~C~~~~~~~~~~~i~~~~~~~~~~~~~~i~~al~~~gPv~v~i~~~~f~~Y~~GIy~~~c 293 (317)
+.|+++|++|||....+ .|...... ..++|++|..++ .++++||++|+++|||+|+|++++|++|++|||+. |
T Consensus 80 ~gGi~~e~~yPY~~~~~~~~~C~~~~~~-~~~~i~~~~~v~--~~~~~ik~~l~~~gPV~v~~~~~~f~~Y~~Giy~~-~ 155 (215)
T 3i06_A 80 NGAVYTEDSYPYASGEGISPPCTTSGHT-VGATITGHVELP--QDEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTS-C 155 (215)
T ss_dssp TTEEEC-CCSCCCCTTSCCCCCCCSSCC-EEEEEEEEEECC--SCHHHHHHHHHHHCCEEEEECCTTGGGCCSSEECS-C
T ss_pred cccccccCccCCcCCCCCCCccccCCcc-cceEecceEEeC--ChHHHHHHHHHHCCCEEEEEEchHHhcCCCCcccC-C
Confidence 24799999999997654 68776554 567899998764 58899999999999999999998999999999984 6
Q ss_pred CCCCCCCCeEEEEEEeecCC--Cee
Q psy12185 294 DGSLANINHAVQIVGYDNYS--RTW 316 (317)
Q Consensus 294 ~~~~~~~~Hav~iVGyg~~~--~~W 316 (317)
.... ++|||+|||||+++ +||
T Consensus 156 ~~~~--~~HaV~iVGyg~~~g~~yW 178 (215)
T 3i06_A 156 VSEQ--LDHGVLLVGYNDSAAVPYW 178 (215)
T ss_dssp CCSC--CCEEEEEEEEESSSSSCEE
T ss_pred CCCc--cCcEEEEEEEeccCCcEEE
Confidence 5544 79999999999886 477
No 17
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ...
Probab=100.00 E-value=3.5e-49 Score=344.07 Aligned_cols=169 Identities=32% Similarity=0.582 Sum_probs=153.2
Q ss_pred CCceeecccCCCCCCCcCCCCCccHHHHHHHHHHHHHHHHHcCCCccCCHHHHhhcCCCCCCCCCCCchHHHHHHHHHhC
Q psy12185 138 IPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEVIDCAGNGNMGCSGGDFCALLDWMDVNK 217 (317)
Q Consensus 138 lP~~~DwR~~g~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~gC~GG~~~~a~~y~~~~~ 217 (317)
||++||||++|+|+||||||.||||||||++++||++++|+++..++||+|+|+||+. .+.||+||++..||+|+.+
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~CGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~yi~~-- 77 (212)
T 2cio_A 1 IPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNQYSEQELLDCDR-RSYGCNGGYPWSALQLVAQ-- 77 (212)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHH--
T ss_pred CCCcccCCCCCCCCCCccCCccchHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhCC-CCCCCCCCCHHHHHHHHHH--
Confidence 6999999999999999999999999999999999999999999999999999999996 6889999999999999988
Q ss_pred CCCCCCCCCccccCCCcccCCCCCCCceEEeeeEEecCCCcHHHHHHHHHhCCCeEEEEec-c-cccccCCCeEeCCCCC
Q psy12185 218 VVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSILTDIATHGPVIAAVNA-L-TWQYYLGGVIQYNCDG 295 (317)
Q Consensus 218 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~~~~~~~~~~i~~al~~~gPv~v~i~~-~-~f~~Y~~GIy~~~c~~ 295 (317)
.|+++|++|||.+..+.|.........+++++|..+. ..++++||++|++ |||+|+|++ . +|++|++|||++.|+.
T Consensus 78 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~-~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Gvy~~~~~~ 155 (212)
T 2cio_A 78 YGIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQ-PYNEGALLYSIAN-QPVSVVLEAAGKDFQLYRGGIFVGPCGN 155 (212)
T ss_dssp TCBCBTTTSCCCSSCCCCCTTTTCSCSBCCSEEEECC-SSCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECCCCCS
T ss_pred hCcCcccccCCcCCCCCcCCCCCCCceEEEeeEEEeC-CccHHHHHHHHHh-CCEEEEEeccCcchhhcCCceecCCCCC
Confidence 5899999999999999998765321567899998765 4588999999986 999999999 4 8999999999988875
Q ss_pred CCCCCCeEEEEEEeecCCCee
Q psy12185 296 SLANINHAVQIVGYDNYSRTW 316 (317)
Q Consensus 296 ~~~~~~Hav~iVGyg~~~~~W 316 (317)
. ++|||+|||||+ +||
T Consensus 156 ~---~~HaV~iVGyg~--~yW 171 (212)
T 2cio_A 156 K---VDHAVAAVGYGP--NYI 171 (212)
T ss_dssp C---CCEEEEEEEEET--TEE
T ss_pred C---CCEEEEEEEecC--CeE
Confidence 3 799999999998 777
No 18
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A*
Probab=100.00 E-value=3.3e-49 Score=343.13 Aligned_cols=167 Identities=35% Similarity=0.701 Sum_probs=152.2
Q ss_pred CCceeecccCCCCCCCcCCCCCccHHHHHHHHHHHHHHHHHcCCCccCCHHHHhhcCCCCCCCCCCCchHHHHHHHHHhC
Q psy12185 138 IPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEVIDCAGNGNMGCSGGDFCALLDWMDVNK 217 (317)
Q Consensus 138 lP~~~DwR~~g~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~gC~GG~~~~a~~y~~~~~ 217 (317)
||++||||++|+|+||||||.||||||||+++++|++++|+++..++||+|+|+||+. .+.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~y~~~~- 78 (208)
T 1o0e_A 1 LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDK-KNHGCLGGAFVFAYQYIINN- 78 (208)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHH-
T ss_pred CCCcCcCCCCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCceecCHHHhhhhcC-CCCCCCCCCHHHHHHHHHHh-
Confidence 6999999999999999999999999999999999999999999999999999999996 68999999999999999874
Q ss_pred CCCCCCCCCccccCCCcccCCCCCCCceEEeeeEEecCCCcHHHHHHHHHhCCCeEEEEec-c-cccccCCCeEeCCCCC
Q psy12185 218 VVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSILTDIATHGPVIAAVNA-L-TWQYYLGGVIQYNCDG 295 (317)
Q Consensus 218 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~~~~~~~~~~i~~al~~~gPv~v~i~~-~-~f~~Y~~GIy~~~c~~ 295 (317)
.|+++|++|||.+..+.|+. .. ..+++++|..+. ..++++||++|++ |||+|+|++ . +|++|++|||+..|+.
T Consensus 79 ~Gi~~e~~yPY~~~~~~C~~--~~-~~~~i~~~~~v~-~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Gvy~~~c~~ 153 (208)
T 1o0e_A 79 GGIDTQANYPYKAVQGPCQA--AS-KVVSIDGYNGVP-FCNEXALKQAVAV-QPSTVAIDASSAQFQQYSSGIFSGPCGT 153 (208)
T ss_dssp TCBCBTTTSCCCSSCCCCCC--CC-CCBCCCEEEECC-TTCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECCCCCS
T ss_pred CCcCcccccCccCCCCcCCC--CC-ceEEeCeEEEeC-CCCHHHHHHHHHh-CCEEEEEEccCcccccccCceECCCCCC
Confidence 59999999999999999986 23 567889998765 4688999999986 999999999 4 8999999999988875
Q ss_pred CCCCCCeEEEEEEeecCCCee
Q psy12185 296 SLANINHAVQIVGYDNYSRTW 316 (317)
Q Consensus 296 ~~~~~~Hav~iVGyg~~~~~W 316 (317)
. ++|||+|||||+ +||
T Consensus 154 ~---~~HaV~iVGyg~--~yW 169 (208)
T 1o0e_A 154 K---LNHGVTIVGYQA--NYW 169 (208)
T ss_dssp C---CCEEEEEEEECS--SEE
T ss_pred c---CCEEEEEEEeCC--CeE
Confidence 3 799999999998 777
No 19
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1
Probab=100.00 E-value=3.8e-49 Score=344.49 Aligned_cols=170 Identities=34% Similarity=0.648 Sum_probs=153.7
Q ss_pred CCceeecccCCCCCCCcCCCCCccHHHHHHHHHHHHHHHHHcCCCccCCHHHHhhcCCCCCCCCCCCchHHHHHHHHHhC
Q psy12185 138 IPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEVIDCAGNGNMGCSGGDFCALLDWMDVNK 217 (317)
Q Consensus 138 lP~~~DwR~~g~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~gC~GG~~~~a~~y~~~~~ 217 (317)
||++||||++|+|+||||||.||||||||+++++|++++|+++..+.||+|+|+||+. .+.||+||++..||+|+.++
T Consensus 1 lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~~e~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~~~~~~- 78 (215)
T 1iwd_A 1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDT-ASHGCNGGWMNNAFQYIITN- 78 (215)
T ss_dssp CCSCEEGGGGTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHH-
T ss_pred CCCcEeCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHhcCCccccChhHeEECcC-CCCCCCCCCHHHHHHHHHHh-
Confidence 6999999999999999999999999999999999999999999999999999999987 57899999999999999874
Q ss_pred CCCCCCCCCccccCCCcccCCCCCCCceEEeeeEEecCCCcHHHHHHHHHhCCCeEEEEec-c-cccccCCCeEeCCCCC
Q psy12185 218 VVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSILTDIATHGPVIAAVNA-L-TWQYYLGGVIQYNCDG 295 (317)
Q Consensus 218 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~~~~~~~~~~i~~al~~~gPv~v~i~~-~-~f~~Y~~GIy~~~c~~ 295 (317)
.|+++|++|||.+.++.|..... ..++|++|..+. ..++++||++|++ |||+|+|++ . +|++|++|||++.|+.
T Consensus 79 ~Gi~~e~~yPY~~~~~~C~~~~~--~~~~i~~~~~v~-~~~~~~ik~~l~~-GPV~v~i~~~~~~f~~Y~~Gvy~~~c~~ 154 (215)
T 1iwd_A 79 GGIDTQQNYPYSAVQGSCKPYRL--RVVSINGFQRVT-RNNESALQSAVAS-QPVSVTVEAAGAPFQHYSSGIFTGPCGT 154 (215)
T ss_dssp TCBCBTTTSCCCSSCCCCCTTCC--CCBCCCEEEECC-TTCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECCCCCC
T ss_pred CCcccccccCccCCCCCCCCCCC--ceEEeCcEEEeC-CCcHHHHHHHHHh-CCEEEEEecCCcchhhcCCceECCCCCC
Confidence 59999999999999999987542 467889998764 5678999999986 999999999 5 7999999999988875
Q ss_pred CCCCCCeEEEEEEeecCC--Cee
Q psy12185 296 SLANINHAVQIVGYDNYS--RTW 316 (317)
Q Consensus 296 ~~~~~~Hav~iVGyg~~~--~~W 316 (317)
. ++|||+|||||+++ +||
T Consensus 155 ~---~~HaV~iVGyg~~~g~~yW 174 (215)
T 1iwd_A 155 A---QNHGVVIVGYGTQSGKNYW 174 (215)
T ss_dssp C---CCEEEEEEEEEEETTEEEE
T ss_pred c---CCEEEEEEEEeccCCccEE
Confidence 2 79999999999875 466
No 20
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A*
Probab=100.00 E-value=2.6e-49 Score=345.85 Aligned_cols=171 Identities=33% Similarity=0.608 Sum_probs=154.2
Q ss_pred CCceeecccCCCCCCCcCCCCCccHHHHHHHHHHHHHHHHHcCCCccCCHHHHhhcCCCCCCCCCCCchHHHHHHHHHhC
Q psy12185 138 IPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEVIDCAGNGNMGCSGGDFCALLDWMDVNK 217 (317)
Q Consensus 138 lP~~~DwR~~g~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~gC~GG~~~~a~~y~~~~~ 217 (317)
||++||||++|+|+||||||.||||||||++++||++++|+++..+.||+|+|+||+. .+.||+||++..||+|+.+
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~yi~~-- 77 (216)
T 1ppo_A 1 LPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER-RSHGCKGGYPPYALEYVAK-- 77 (216)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCS-SSCTTBCCCHHHHHHHHHH--
T ss_pred CCCcCcCCCCCCCCCCccCCcCccHHHHHHHHHHHHHHHHccCCceecCHHHHHhccC-CCCCCCCCCHHHHHHHHHH--
Confidence 6999999999999999999999999999999999999999999999999999999997 6899999999999999988
Q ss_pred CCCCCCCCCccccCCCcccCCCCCCCceEEeeeEEecCCCcHHHHHHHHHhCCCeEEEEec--ccccccCCCeEeCCCCC
Q psy12185 218 VVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSILTDIATHGPVIAAVNA--LTWQYYLGGVIQYNCDG 295 (317)
Q Consensus 218 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~~~~~~~~~~i~~al~~~gPv~v~i~~--~~f~~Y~~GIy~~~c~~ 295 (317)
.|+++|++|||.+..+.|+........++|++|..++ .+++++||++|++ |||+|+|++ ++|++|++|||++.|+.
T Consensus 78 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~-~~~~~~i~~~l~~-GPV~v~~~~~~~~f~~Y~~Giy~~~~~~ 155 (216)
T 1ppo_A 78 NGIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQ-PNNEGNLLNAIAK-QPVSVVVESKGRPFQLYKGGIFEGPCGT 155 (216)
T ss_dssp HCBCBTTTSCCCSSCCCCCGGGCCSCCBCCCEEEECC-SSCHHHHHHHHHH-SCEEEEECCCSHHHHHCCSSEECCSCCS
T ss_pred hCcCccccCCccCCCCCcCCCCCCCceEEeccEEEEC-CCCHHHHHHHHHh-CCEEEEEecCChhhhhcCCceECCCCCC
Confidence 4899999999999999998754322567899998765 4688999999986 999999999 58999999999888875
Q ss_pred CCCCCCeEEEEEEeecCC--Cee
Q psy12185 296 SLANINHAVQIVGYDNYS--RTW 316 (317)
Q Consensus 296 ~~~~~~Hav~iVGyg~~~--~~W 316 (317)
. ++|||+|||||+++ +||
T Consensus 156 ~---~~HaV~iVGyg~~~g~~yw 175 (216)
T 1ppo_A 156 K---VDHAVTAVGYGKSGGKGYI 175 (216)
T ss_dssp C---CCEEEEEEEEEEETTEEEE
T ss_pred C---CCEEEEEEEeeccCCccEE
Confidence 3 69999999999875 477
No 21
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana}
Probab=100.00 E-value=4.7e-49 Score=343.68 Aligned_cols=169 Identities=36% Similarity=0.636 Sum_probs=153.9
Q ss_pred CCceeecccCCCCCCCcCCCCCccHHHHHHHHHHHHHHHHHcCCCccCCHHHHhhcCCCCCCCCCCCchHHHHHHHHHhC
Q psy12185 138 IPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEVIDCAGNGNMGCSGGDFCALLDWMDVNK 217 (317)
Q Consensus 138 lP~~~DwR~~g~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~gC~GG~~~~a~~y~~~~~ 217 (317)
||++||||++|+|+||||||.||||||||++++||++++|+++..++||+|+|+||+. .+.||+||++..||+|+.+
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~y~~~-- 77 (214)
T 2bdz_A 1 YPESIDWREKGAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCER-RSHGCDGGYQTTSLQYVVD-- 77 (214)
T ss_dssp CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCBCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHH--
T ss_pred CCCcEeCCCCCCCCCCccCCCCccHHHHHhHHHHHHHHHHhcCCccccCHHHHHhhcC-CCCCCCCCCHHHHHHHHHH--
Confidence 6999999999999999999999999999999999999999999999999999999997 6889999999999999988
Q ss_pred CCCCCCCCCccccCCCcccCCCCCCCceEEeeeEEecCCCcHHHHHHHHHhCCCeEEEEec--ccccccCCCeEeCCCCC
Q psy12185 218 VVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSILTDIATHGPVIAAVNA--LTWQYYLGGVIQYNCDG 295 (317)
Q Consensus 218 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~~~~~~~~~~i~~al~~~gPv~v~i~~--~~f~~Y~~GIy~~~c~~ 295 (317)
.|+++|++|||.+..+.|.........++|++|..+. ..++++||++|++ |||+|+|++ ++|++|++|||+..|+.
T Consensus 78 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~-~~~~~~i~~~l~~-gPV~v~i~~~~~~f~~Y~~Giy~~~~~~ 155 (214)
T 2bdz_A 78 NGVHTEREYPYEKKQGRCRAKDKKGPKVYITGYKYVP-ANDEISLIQAIAN-QPVSVVTDSRGRGFQFYKGGIYEGPCGT 155 (214)
T ss_dssp HCEEBTTTSCCCSSCCCCCTTTCCSCEECCCEEEEEC-SSBHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECCSCCS
T ss_pred hCCCccccCCCCCCCCCCCCCCCCCceeeecCEEEeC-CCcHHHHHHHHHh-CCEEEEEeeChhHhhcccCceecCCCCC
Confidence 4999999999999999998765422567899998775 5688999999986 999999999 48999999999988875
Q ss_pred CCCCCCeEEEEEEeecCCCee
Q psy12185 296 SLANINHAVQIVGYDNYSRTW 316 (317)
Q Consensus 296 ~~~~~~Hav~iVGyg~~~~~W 316 (317)
. ++|||+|||||+ +||
T Consensus 156 ~---~~HaV~iVGyg~--~yW 171 (214)
T 2bdz_A 156 N---TDHAVTAVGYGK--TYL 171 (214)
T ss_dssp C---CCEEEEEEEECS--SEE
T ss_pred C---CCeEEEEEEcCC--CeE
Confidence 3 799999999998 777
No 22
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A*
Probab=100.00 E-value=5.8e-49 Score=349.86 Aligned_cols=175 Identities=33% Similarity=0.646 Sum_probs=155.9
Q ss_pred CCCceeecccCCCCCCCcCCCCCccHHHHHHHHHHHHHHHHHcCCCccCCHHHHhhcCCCCCCCCCCCchHHHHHHHHHh
Q psy12185 137 GIPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEVIDCAGNGNMGCSGGDFCALLDWMDVN 216 (317)
Q Consensus 137 ~lP~~~DwR~~g~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~gC~GG~~~~a~~y~~~~ 216 (317)
+||++||||++|+|+||||||.||||||||++++||++++|+++..+.||+|+|+||+. .+.||+||++..||+|+.++
T Consensus 1 ~lP~~~DwR~~g~vtpVkdQg~CGsCWAfa~~~~lE~~~~i~~g~~~~LS~q~lvdC~~-~~~gC~GG~~~~a~~y~~~~ 79 (246)
T 2b1m_A 1 DAPESWDWSKKGVITKVKFQGQCGSGWAFSATGAIEAAHAIATGNLVSLSEQELIDCVD-ESEGCYNGWHYQSFEWVVKH 79 (246)
T ss_dssp -CCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSBTTTBCCHHHHHHHHHHT
T ss_pred CCCCcCCCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhcC-CCCCCCCCCHHHHHHHHHHh
Confidence 47999999999999999999999999999999999999999999999999999999997 68999999999999999873
Q ss_pred CCCCCCCCCCccccCCCcccCCCCCCCceEEeee---EEecCCCcHHHHHHHHHh---CCCeEEEEecccccccCCCeEe
Q psy12185 217 KVVLEPESEYPLLLKDAACKRKATSPNGVKIKSY---TCDTLIPSESSILTDIAT---HGPVIAAVNALTWQYYLGGVIQ 290 (317)
Q Consensus 217 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~---~~~~~~~~~~~i~~al~~---~gPv~v~i~~~~f~~Y~~GIy~ 290 (317)
.|+++|++|||.+.++.|...... ..++|++| ..+. ..++++||++|++ +|||+|+|++++|++|++|||+
T Consensus 80 -~Gi~~e~~yPY~~~~~~C~~~~~~-~~~~i~~y~~~~~v~-~~~~~~ik~~l~~~~~~GPV~v~i~~~~f~~Y~~Giy~ 156 (246)
T 2b1m_A 80 -GGIASEADYPYKARDGKCKANEIQ-DKVTIDNYGVQILSN-ESTESEAESSLQSFVLEQPISVSIDAKDFHFYSGGIYD 156 (246)
T ss_dssp -TCBCBTTTSCCCSSCCCCCGGGCC-CCBCCSEEEEEECCT-TSCHHHHHHHHHHHHHHSCEEEEECCTTGGGCCSSEEC
T ss_pred -CCcCccccccccCCCCcCcCCCCC-CceeEcCcceeeecC-CChHHHHHHHHHhhccCCCEEEEEEcchhhcccceeec
Confidence 599999999999999999876544 56788888 5553 4688999999998 6999999999889999999999
Q ss_pred C-CCCCCCCCCCeEEEEEEeecCC--Cee
Q psy12185 291 Y-NCDGSLANINHAVQIVGYDNYS--RTW 316 (317)
Q Consensus 291 ~-~c~~~~~~~~Hav~iVGyg~~~--~~W 316 (317)
. .|+... .++|||+|||||+++ +||
T Consensus 157 ~~~c~~~~-~~~HaV~iVGyg~~~g~~yW 184 (246)
T 2b1m_A 157 GGNCSSPY-GINHFVLIVGYGSEDGVDYW 184 (246)
T ss_dssp CTTCCSSC-CCCEEEEEEEEEEETTEEEE
T ss_pred CCCCCCCC-cCceEEEEEEEeccCCceEE
Confidence 8 787542 279999999999865 466
No 23
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ...
Probab=100.00 E-value=4.2e-49 Score=345.64 Aligned_cols=173 Identities=32% Similarity=0.637 Sum_probs=154.6
Q ss_pred CCceeecccCCCCCCCcCCCCCccHHHHHHHHHHHHHHHHHcCCCccCCHHHHhhcCCC-CCCCCCCCchHHHHHHHHHh
Q psy12185 138 IPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEVIDCAGN-GNMGCSGGDFCALLDWMDVN 216 (317)
Q Consensus 138 lP~~~DwR~~g~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~-~~~gC~GG~~~~a~~y~~~~ 216 (317)
||++||||++|+|+||||||.||||||||++++||++++|++++.+.||+|+|+||+.. ++.||+||++..||+|+.++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~g~~gC~GG~~~~a~~y~~~~ 80 (220)
T 2xu3_A 1 APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDN 80 (220)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTTTCCTTBCCCHHHHHHHHHHH
T ss_pred CCCcEeCCCCCCCCCCcccCcccHHHHHHhHHHHHHHHHHhcCCceecCHHHHHhhccCCCCCCCCCCCHHHHHHHHHHh
Confidence 69999999999999999999999999999999999999999999999999999999863 37899999999999999643
Q ss_pred CCCCCCCCCCccccCCCcccCCCCCCCceEEeeeEEecCCCcHHHHHHHHHhCCCeEEEEec--ccccccCCCeEeC-CC
Q psy12185 217 KVVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSILTDIATHGPVIAAVNA--LTWQYYLGGVIQY-NC 293 (317)
Q Consensus 217 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~~~~~~~~~~i~~al~~~gPv~v~i~~--~~f~~Y~~GIy~~-~c 293 (317)
.|+++|++|||.+..+.|...... ..+++++|..+. .++++||++|+++|||+|+|++ ++|++|++|||.. .|
T Consensus 81 -~Gi~~e~~yPY~~~~~~C~~~~~~-~~~~i~~~~~v~--~~~~~ik~~l~~~GPV~v~~~~~~~~f~~Y~~Gvy~~~~c 156 (220)
T 2xu3_A 81 -GGLDSEESYPYEATEESCKYNPKY-SVANDTGFVDIP--KQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDC 156 (220)
T ss_dssp -TCEEBTTTSCCCSSCCCCCCCGGG-EEECCSEEEECC--SCHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTC
T ss_pred -CCcccccccCCcccCcCccCCCCC-cceeeeeEEEeC--CCHHHHHHHHHhcCCEEEEEeecCcccccccceEEcCCCC
Confidence 799999999999999999876544 567889998765 3899999999999999999999 3899999999987 48
Q ss_pred CCCCCCCCeEEEEEEee----cCC--Cee
Q psy12185 294 DGSLANINHAVQIVGYD----NYS--RTW 316 (317)
Q Consensus 294 ~~~~~~~~Hav~iVGyg----~~~--~~W 316 (317)
+... ++|||+||||| +++ +||
T Consensus 157 ~~~~--~~HaV~iVGygd~~~~~~g~~yW 183 (220)
T 2xu3_A 157 SSED--MDHGVLVVGYGFESTESDNNKYW 183 (220)
T ss_dssp CSSC--CCEEEEEEEEEECCCSSSCCEEE
T ss_pred CCCC--CCeEEEEEEcCCccccCCCCcEE
Confidence 7643 89999999999 543 477
No 24
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A*
Probab=100.00 E-value=1.8e-49 Score=348.02 Aligned_cols=176 Identities=31% Similarity=0.579 Sum_probs=158.3
Q ss_pred CCceeecccCC-CCCCCcCCCCCccHHHHHHHHHHHHHHHHHcCCCccCCHHHHhhcCCC-CCCCCCCCchHHHHHHHHH
Q psy12185 138 IPVKKDWREAG-IIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEVIDCAGN-GNMGCSGGDFCALLDWMDV 215 (317)
Q Consensus 138 lP~~~DwR~~g-~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~-~~~gC~GG~~~~a~~y~~~ 215 (317)
||++||||++| +|+||||||.||||||||++++||++++|+++..++||+|+|+||+.. .+.||+||++..|++|+.+
T Consensus 1 lP~~~DwR~~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~ 80 (220)
T 8pch_A 1 YPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRY 80 (220)
T ss_dssp CCSCEEHHHHSSCSCCCCBCTTSCCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHGGGGTCCGGGCCCHHHHHHHHHH
T ss_pred CCCCEecCcCCCcCCcccccCCCchHHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhCcCccCCCCCCCCCHHHHHHHHHH
Confidence 69999999999 899999999999999999999999999999999999999999999863 4789999999999999987
Q ss_pred hCCCCCCCCCCccccCCCcccCCCCCCCceEEeeeEEecCCCcHHHHHHHHHhCCCeEEEEec-ccccccCCCeEeC-CC
Q psy12185 216 NKVVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSILTDIATHGPVIAAVNA-LTWQYYLGGVIQY-NC 293 (317)
Q Consensus 216 ~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~~~~~~~~~~i~~al~~~gPv~v~i~~-~~f~~Y~~GIy~~-~c 293 (317)
+ .|+++|++|||.+..+.|...+.. ...++++|..+. ..++++||++|+++|||+++|++ ++|++|++|||.. .|
T Consensus 81 ~-~Gi~~e~~yPY~~~~~~C~~~~~~-~~~~i~~~~~v~-~~~~~~ik~~l~~~gPV~~~~~~~~~f~~Y~~Giy~~~~~ 157 (220)
T 8pch_A 81 N-KGIMGEDTYPYKGQDDHCKFQPDK-AIAFVKDVANIT-MNDEEAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTSC 157 (220)
T ss_dssp H-TCEEBTTTSCCCSSCCCCCCCGGG-EEECEEEEEECC-TTCHHHHHHHHHHTCCEEEEECCCHHHHTCCSSEECCSSC
T ss_pred c-CCcCcccccCccCCCCCCCCCCCc-ceEEeCCEEEeC-CCCHHHHHHHHHhcCCEEEEEEeccchhhcCCCcccCCcC
Confidence 4 599999999999999999876655 567888988765 46899999999999999999999 7999999999987 68
Q ss_pred CCCCCCCCeEEEEEEeecCC--Cee
Q psy12185 294 DGSLANINHAVQIVGYDNYS--RTW 316 (317)
Q Consensus 294 ~~~~~~~~Hav~iVGyg~~~--~~W 316 (317)
......++|||+|||||+++ +||
T Consensus 158 ~~~~~~~~HaV~iVGyg~~~g~~yW 182 (220)
T 8pch_A 158 HKTPDKVNHAVLAVGYGEENGIPYW 182 (220)
T ss_dssp CCSTTTCCEEEEEEEEEEETTEEEE
T ss_pred CCCCCcCCcEEEEEEEEccCCeeEE
Confidence 65433489999999999876 466
No 25
>3p5u_A Actinidin; SAD, cysteine proteinases, hydrolase; 1.50A {Actinidia arguta} SCOP: d.3.1.1 PDB: 3p5v_A 3p5w_A 3p5x_A 1aec_A* 2act_A
Probab=100.00 E-value=3.1e-49 Score=346.48 Aligned_cols=173 Identities=30% Similarity=0.600 Sum_probs=154.2
Q ss_pred CCceeecccCCCCCCCcCCCCCccHHHHHHHHHHHHHHHHHcCCCccCCHHHHhhcCCC-CCCCCCCCchHHHHHHHHHh
Q psy12185 138 IPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEVIDCAGN-GNMGCSGGDFCALLDWMDVN 216 (317)
Q Consensus 138 lP~~~DwR~~g~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~-~~~gC~GG~~~~a~~y~~~~ 216 (317)
||++||||++|+|+||||||.||||||||++++||++++|++++.++||+|+|+||+.. .+.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~i~~~~~~~LS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~ 80 (220)
T 3p5u_A 1 LPDYVDWRSSGAVVDIKDQGQCGSAWAFSTIAAVEGINKIATGDLISLSEQELVDCGRTQNTRGCDGGFMTDGFQFIINN 80 (220)
T ss_dssp CCSCEETTTTTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCCSSCCTTBCCCHHHHHHHHHHH
T ss_pred CCCCCcCCcCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHhHcEECCCCCCCCCCCCCCHHHHHHHHHHh
Confidence 69999999999999999999999999999999999999999999999999999999974 27899999999999999875
Q ss_pred CCCCCCCCCCccccCCCcccCCCCCCCceEEeeeEEecCCCcHHHHHHHHHhCCCeEEEEec--ccccccCCCeEeCCCC
Q psy12185 217 KVVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSILTDIATHGPVIAAVNA--LTWQYYLGGVIQYNCD 294 (317)
Q Consensus 217 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~~~~~~~~~~i~~al~~~gPv~v~i~~--~~f~~Y~~GIy~~~c~ 294 (317)
.|+++|++|||.+..+.|.........+++++|..++ ..++++|+++| .+|||+|+|++ ++|++|++|||++.|+
T Consensus 81 -~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~-~~~~~~l~~~l-~~GPV~v~~~~~~~~f~~Y~~Giy~~~~~ 157 (220)
T 3p5u_A 81 -GGINTEANYPYTAEEGQCNLDLQQEKYVSIDTYENVP-YNNEWALQTAV-AYQPVSVALEAAGYNFQHYSSGIFTGPCG 157 (220)
T ss_dssp -TCBCBTTTSCCCSSCCCCCHHHHTCCSBCCCEEEECC-TTCHHHHHHHH-TTSCEEEEECCCSHHHHTCCSSEECCCCC
T ss_pred -CCcCcccccccccCCCCcCcCCCCCceEEEccEEEeC-CCcHHHHHHHH-hcCCEEEEEecCchhhccccCceECCCCC
Confidence 6999999999999999998644331357888998775 56889999999 67999999999 5899999999998887
Q ss_pred CCCCCCCeEEEEEEeecCCC--ee
Q psy12185 295 GSLANINHAVQIVGYDNYSR--TW 316 (317)
Q Consensus 295 ~~~~~~~Hav~iVGyg~~~~--~W 316 (317)
.. ++|||+|||||++++ ||
T Consensus 158 ~~---~~HaV~iVGyg~~~g~~yW 178 (220)
T 3p5u_A 158 TA---VDHAVTIVGYGTEGGIDYW 178 (220)
T ss_dssp CS---CCEEEEEEEEEEETTEEEE
T ss_pred Cc---cceEEEEEEEecCCCceEE
Confidence 54 699999999998763 66
No 26
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E*
Probab=100.00 E-value=4.5e-49 Score=344.81 Aligned_cols=171 Identities=33% Similarity=0.595 Sum_probs=154.1
Q ss_pred CCceeecccCCCCCCCcCCCCCccHHHHHHHHHHHHHHHHHcCCCccCCHHHHhhcCCCCCCCCCCCchHHHHHHHHHhC
Q psy12185 138 IPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEVIDCAGNGNMGCSGGDFCALLDWMDVNK 217 (317)
Q Consensus 138 lP~~~DwR~~g~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~gC~GG~~~~a~~y~~~~~ 217 (317)
||++||||++|+|+||||||.||||||||++++||++++|+++..+.||+|+|+||+. .+.||+||++..||+|+.+
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~~~~~-- 77 (218)
T 1yal_A 1 YPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDK-HSYGCKGGYQTTSLQYVAN-- 77 (218)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHH--
T ss_pred CCCcCcCCCCCCCCCCccCccchhHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhcC-CCCCCCCCCHHHHHHHHHH--
Confidence 6999999999999999999999999999999999999999999999999999999995 6899999999999999988
Q ss_pred CCCCCCCCCccccCCCcccCCCCCCCceEEeeeEEecCCCcHHHHHHHHHhCCCeEEEEec--ccccccCCCeEeCCCCC
Q psy12185 218 VVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSILTDIATHGPVIAAVNA--LTWQYYLGGVIQYNCDG 295 (317)
Q Consensus 218 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~~~~~~~~~~i~~al~~~gPv~v~i~~--~~f~~Y~~GIy~~~c~~ 295 (317)
.|+++|++|||.+..+.|.........++|++|..+. .+++++||++|++ |||+|+|++ ++|++|++|||++.|+.
T Consensus 78 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~-~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Giy~~~~~~ 155 (218)
T 1yal_A 78 NGVHTSKVYPYQAKQYKCRATDKPGPKVKITGYKRVP-SNCETSFLGALAN-QPLSVLVEAGGKPFQLYKSGVFDGPCGT 155 (218)
T ss_dssp HCBCBTTTSCCCSSCCCCCGGGCCSCCBCCSEEEECC-SSBHHHHHHHHTT-SCEEEEECCCSHHHHTCCSSEECCSCCS
T ss_pred cCCCccccccccCCCCCcccCcCCCceEEEeeEEEeC-CCCHHHHHHHHHh-CCEEEEEeccchhccccCCceECCCCCC
Confidence 4899999999999999998754322567899998765 4688999999986 999999999 58999999999888875
Q ss_pred CCCCCCeEEEEEEeecCC--Cee
Q psy12185 296 SLANINHAVQIVGYDNYS--RTW 316 (317)
Q Consensus 296 ~~~~~~Hav~iVGyg~~~--~~W 316 (317)
. ++|||+|||||+++ +||
T Consensus 156 ~---~~HaV~iVGyg~~~g~~yW 175 (218)
T 1yal_A 156 K---LDHAVTAVGYGTSDGKNYI 175 (218)
T ss_dssp C---CCEEEEEEEEEEETTEEEE
T ss_pred C---CCEEEEEEEeeccCCccEE
Confidence 3 79999999999876 477
No 27
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ...
Probab=100.00 E-value=3.3e-49 Score=345.95 Aligned_cols=173 Identities=34% Similarity=0.668 Sum_probs=155.7
Q ss_pred CCceeecccCCCCCCCcCCCCCccHHHHHHHHHHHHHHHHHcCCCccCCHHHHhhcC-CC-CCCCCCCCchHHHHHHHHH
Q psy12185 138 IPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEVIDCA-GN-GNMGCSGGDFCALLDWMDV 215 (317)
Q Consensus 138 lP~~~DwR~~g~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~-~~-~~~gC~GG~~~~a~~y~~~ 215 (317)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+ .. .+.||+||++..|++|+.+
T Consensus 2 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~~gC~GG~~~~a~~~~~~ 81 (218)
T 3ovx_A 2 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIID 81 (218)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGGTCCGGGCCCHHHHHHHHHH
T ss_pred CCCCCCcccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHcCCccccCHHHheeccCCcCCCCCCCCCCHHHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999999998 32 4789999999999999976
Q ss_pred hCCCCCCCCCCccccCCCcccCCCCCCCceEEeeeEEecCCCcHHHHHHHHHhCCCeEEEEec--ccccccCCCeEeC-C
Q psy12185 216 NKVVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSILTDIATHGPVIAAVNA--LTWQYYLGGVIQY-N 292 (317)
Q Consensus 216 ~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~~~~~~~~~~i~~al~~~gPv~v~i~~--~~f~~Y~~GIy~~-~ 292 (317)
+ .|+++|++|||.+..+.|...... ...++++|..+. ..++++||++|+++|||+++|++ ++|++|++|||.. .
T Consensus 82 ~-~Gi~~e~~yPY~~~~~~C~~~~~~-~~~~i~~~~~~~-~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~ 158 (218)
T 3ovx_A 82 N-KGIDSDASYPYKAMDQKCQYDSKY-RAATCSKYTELP-YGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPS 158 (218)
T ss_dssp H-TCEEBTTTSCCCSSCCCCCCCGGG-EEECCCEEEECC-TTCHHHHHHHHHHTCCEEEEECCCSHHHHHCCSSEECCTT
T ss_pred h-CCcCcccccCccCCCCcccCCCcc-ceeeeccEEEeC-CCCHHHHHHHHHhcCCEEEEEEecchhhhcccCceecCCC
Confidence 4 799999999999999999877655 567888998765 46889999999999999999999 4899999999987 5
Q ss_pred CCCCCCCCCeEEEEEEeecCC--Cee
Q psy12185 293 CDGSLANINHAVQIVGYDNYS--RTW 316 (317)
Q Consensus 293 c~~~~~~~~Hav~iVGyg~~~--~~W 316 (317)
|.. .++|||+|||||+++ +||
T Consensus 159 ~~~---~~~HaV~iVGyg~~~g~~yw 181 (218)
T 3ovx_A 159 CTQ---NVNHGVLVVGYGDLNGKEYW 181 (218)
T ss_dssp CCS---CCCEEEEEEEEEEETTEEEE
T ss_pred CCc---ccCcEEEEEEEeccCCceEE
Confidence 733 389999999999876 466
No 28
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1
Probab=100.00 E-value=5.6e-49 Score=346.60 Aligned_cols=174 Identities=32% Similarity=0.647 Sum_probs=154.8
Q ss_pred CCCceeecccCCCCCCCcCCCCCccHHHHHHHHHHHHHHHHHcCCCccCCHHHHhhcCCCCCCCCCCCchHHHHHHHHHh
Q psy12185 137 GIPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEVIDCAGNGNMGCSGGDFCALLDWMDVN 216 (317)
Q Consensus 137 ~lP~~~DwR~~g~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~gC~GG~~~~a~~y~~~~ 216 (317)
+||++||||++|+|+||||||.||||||||++++||++++|+++..+.||+|+|+||+...+.||+||++..||+|+.++
T Consensus 1 ~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~~gC~GG~~~~a~~y~~~~ 80 (229)
T 1s4v_A 1 TVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQNQGCNGGLMDYAFEFIKQR 80 (229)
T ss_dssp CCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCSSCCTTBCBCHHHHHHHHHHH
T ss_pred CCCCCEeCCCCCCCCCCccCccchHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhCCCCCCCCCCCCHHHHHHHHHHh
Confidence 47999999999999999999999999999999999999999999999999999999986457899999999999999874
Q ss_pred CCCCCCCCCCccccCCCcccCCCCCCCceEEeeeEEecCCCcHHHHHHHHHhCCCeEEEEec--ccccccCCCeEeCCCC
Q psy12185 217 KVVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSILTDIATHGPVIAAVNA--LTWQYYLGGVIQYNCD 294 (317)
Q Consensus 217 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~~~~~~~~~~i~~al~~~gPv~v~i~~--~~f~~Y~~GIy~~~c~ 294 (317)
.|+++|++|||.+..+.|.........++|++|..+. ..++++|+++|++ |||+|+|++ ++|++|++|||++.|+
T Consensus 81 -~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~-~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Giy~~~c~ 157 (229)
T 1s4v_A 81 -GGITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVP-ENDENALLKAVAN-QPVSVAIDAGGSDFQFYSEGVFTGSCG 157 (229)
T ss_dssp -TCBCBTTTSCCCSSCCCCCHHHHTCCCBCCCEEEECC-TTCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECCCCC
T ss_pred -CCccccccCCccCCCCCCCCCCCCCcEEEeeeEEEeC-CccHHHHHHHHhc-CCEEEEEEeCcHHHhhCCCcEECCCCC
Confidence 5999999999999999998642221457889998765 4688999999986 999999999 5899999999988887
Q ss_pred CCCCCCCeEEEEEEeecCC---Cee
Q psy12185 295 GSLANINHAVQIVGYDNYS---RTW 316 (317)
Q Consensus 295 ~~~~~~~Hav~iVGyg~~~---~~W 316 (317)
.. ++|||+|||||+++ +||
T Consensus 158 ~~---~~HaV~iVGyg~~~~g~~yW 179 (229)
T 1s4v_A 158 TE---LDHGVAIVGYGTTIDGTKYW 179 (229)
T ss_dssp CC---CCEEEEEEEEEECTTSCEEE
T ss_pred CC---CCeEEEEEEeccccCCCCEE
Confidence 53 69999999999876 577
No 29
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A
Probab=100.00 E-value=6.4e-49 Score=348.81 Aligned_cols=168 Identities=29% Similarity=0.518 Sum_probs=153.7
Q ss_pred CCCCceeecccCCCCCCCcCCCCCccHHHHHHHHHHHHHHHHHcCCCccCCHHHHhhcCCCCCCCCCCCchHHHHHHHHH
Q psy12185 136 TGIPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEVIDCAGNGNMGCSGGDFCALLDWMDV 215 (317)
Q Consensus 136 ~~lP~~~DwR~~g~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~gC~GG~~~~a~~y~~~ 215 (317)
.+||++||||++|+|+||||||.||||||||++++||++++|+++..+.||+|+|+||+. .+.||+||++..|++|+.+
T Consensus 16 ~~lP~~~DwR~~~~vtpVkdQg~CGsCWAFaa~~alE~~~~i~~~~~~~lSeq~l~dC~~-~~~gC~GG~~~~a~~yi~~ 94 (241)
T 2oul_A 16 NFDHAAYDWRLHSGVTPVKDQKNCGSCWAFSSIGSVESQYAIRKNKLITLSEQELVDCSF-KNYGCNGGLINNAFEDMIE 94 (241)
T ss_dssp CCCSSCEEGGGTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHCT-TSCTTBCBCHHHHHHHHHH
T ss_pred ccCCCccccCcCCCCCCCccCccchHHHHHHHHHHHHHHHHHhcCCCcccCHHHHHhhcC-CCCCCCCCCHHHHHHHHHH
Confidence 579999999999999999999999999999999999999999999999999999999997 5889999999999999987
Q ss_pred hCCCCCCCCCCccccCCCc-ccCCCCCCCceEEeeeEEecCCCcHHHHHHHHHhCCCeEEEEec-ccccccCCCeEeCCC
Q psy12185 216 NKVVLEPESEYPLLLKDAA-CKRKATSPNGVKIKSYTCDTLIPSESSILTDIATHGPVIAAVNA-LTWQYYLGGVIQYNC 293 (317)
Q Consensus 216 ~~~Gi~~e~~yPY~~~~~~-C~~~~~~~~~~~i~~~~~~~~~~~~~~i~~al~~~gPv~v~i~~-~~f~~Y~~GIy~~~c 293 (317)
+ .|+++|++|||.+..+. |+..... ..++|++|..+. ..++++||++| |||+|+|++ ++|++|++|||++.|
T Consensus 95 ~-~Gi~~e~~yPY~~~~~~~C~~~~~~-~~~~i~~~~~v~-~~~~~~ik~~l---GPV~v~i~~~~~f~~Y~~Giy~~~c 168 (241)
T 2oul_A 95 L-GGICPDGDYPYVSDAPNLCNIDRCT-EKYGIKNYLSVP-DNKLKEALRFL---GPISISVAVSDDFAFYKEGIFDGEC 168 (241)
T ss_dssp T-TSBCBTTSSCCCTTSCCCCCTTSSS-CCBCCSEEEECC-TTCHHHHHHHT---CCEEEEECBCHHHHTCCSSBCCSCB
T ss_pred h-CCcCccccCCCcCCCCCcCCCCCCc-cceeeeeEEEeC-CCCHHHHHHhh---CCEEEEEecCcchhhcCCcEEcCcC
Confidence 4 69999999999999888 9876555 678899998765 45889999999 999999999 799999999998878
Q ss_pred CCCCCCCCeEEEEEEeecCC
Q psy12185 294 DGSLANINHAVQIVGYDNYS 313 (317)
Q Consensus 294 ~~~~~~~~Hav~iVGyg~~~ 313 (317)
+.. ++|||+|||||+++
T Consensus 169 ~~~---~~HaV~iVGyg~~~ 185 (241)
T 2oul_A 169 GDQ---LNHAVMLVGFGMKE 185 (241)
T ss_dssp CSS---CCEEEEEEEEEEEE
T ss_pred CCC---CCEEEEEEEecccc
Confidence 753 79999999999874
No 30
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare}
Probab=100.00 E-value=5e-49 Score=352.50 Aligned_cols=174 Identities=34% Similarity=0.632 Sum_probs=155.4
Q ss_pred CCCCceeecccCCCCCCCcCCCCCccHHHHHHHHHHHHHHHHHcCCCccCCHHHHhhcCCCCCCCCCCCchHHHHHHHHH
Q psy12185 136 TGIPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEVIDCAGNGNMGCSGGDFCALLDWMDV 215 (317)
Q Consensus 136 ~~lP~~~DwR~~g~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~gC~GG~~~~a~~y~~~ 215 (317)
.+||++||||++|+|+||||||.||||||||++++||++++|+++..+.||+|+|+||+...+.||+||++..||+|+.+
T Consensus 2 ~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~lvdC~~~~~~GC~GG~~~~a~~yi~~ 81 (262)
T 2fo5_A 2 SDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKN 81 (262)
T ss_dssp -CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCSSCCGGGCBCHHHHHHHHHH
T ss_pred CCCCCcccCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhcCCCCCCCCCCCHHHHHHHHHH
Confidence 36899999999999999999999999999999999999999999999999999999998645789999999999999987
Q ss_pred hCCCCCCCCCCccccCCCcccCCC---CCCC-ceEEeeeEEecCCCcHHHHHHHHHhCCCeEEEEec--ccccccCCCeE
Q psy12185 216 NKVVLEPESEYPLLLKDAACKRKA---TSPN-GVKIKSYTCDTLIPSESSILTDIATHGPVIAAVNA--LTWQYYLGGVI 289 (317)
Q Consensus 216 ~~~Gi~~e~~yPY~~~~~~C~~~~---~~~~-~~~i~~~~~~~~~~~~~~i~~al~~~gPv~v~i~~--~~f~~Y~~GIy 289 (317)
+ .|+++|++|||.+..+.|.... .. . .++|++|..+. ..++++||++|++ |||+|+|++ ++|++|++|||
T Consensus 82 ~-~Gi~~e~~yPY~~~~~~C~~~~~~~~~-~~~~~i~~y~~v~-~~~e~~ik~al~~-GPV~v~i~~~~~~f~~Y~sGVy 157 (262)
T 2fo5_A 82 N-GGLITEAAYPYRAARGTCNVARAAQNS-PVVVHIDGHQDVP-ANSEEDLARAVAN-QPVSVAVEASGKAFMFYSEGVF 157 (262)
T ss_dssp T-TCEEBTTTSCCCSSCCCCCHHHHHHHC-CCEECCCEEEECC-TTCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEE
T ss_pred c-CCcCchhcCCCcCccCccCCcccccCC-ceeEEeceEEEcC-CchHHHHHHHHHh-CCEEEEEecChHHHhccCCceE
Confidence 4 5999999999999999998653 33 4 67889998765 4688999999987 999999999 48999999999
Q ss_pred eCCCCCCCCCCCeEEEEEEeecCC---Cee
Q psy12185 290 QYNCDGSLANINHAVQIVGYDNYS---RTW 316 (317)
Q Consensus 290 ~~~c~~~~~~~~Hav~iVGyg~~~---~~W 316 (317)
+..|+.. ++|||+|||||++. +||
T Consensus 158 ~~~c~~~---~~HaV~IVGyg~~~~G~~YW 184 (262)
T 2fo5_A 158 TGECGTE---LDHGVAVVGYGVAEDGKAYW 184 (262)
T ss_dssp CCCCCCC---CCEEEEEEEEEECTTSCEEE
T ss_pred CCCCCCc---CCEEEEEEEEcccCCCceEE
Confidence 9888753 69999999999873 477
No 31
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A*
Probab=100.00 E-value=1e-48 Score=347.94 Aligned_cols=169 Identities=33% Similarity=0.529 Sum_probs=153.9
Q ss_pred CCCCCceeecccCCCCCCCcCCCCCccHHHHHHHHHHHHHHHHHcCCCccCCHHHHhhcCCCCCCCCCCCchHHHHHHHH
Q psy12185 135 PTGIPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEVIDCAGNGNMGCSGGDFCALLDWMD 214 (317)
Q Consensus 135 ~~~lP~~~DwR~~g~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~gC~GG~~~~a~~y~~ 214 (317)
..+||++||||++|+|+||||||.||||||||++++||++++|+++..+.||+|+|+||+. .+.||+||++..|++|+.
T Consensus 17 ~~~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~alE~~~~i~~~~~~~lSeq~lvdC~~-~~~gC~GG~~~~a~~y~~ 95 (243)
T 3bwk_A 17 AKLDRIAYDWRLHGGVTPVKDQALCGSCWAFSSVGSVESQYAIRKKALFLFSEQELVDCSV-KNNGCYGGYITNAFDDMI 95 (243)
T ss_dssp CCCCCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCSCCCBCHHHHHHHCT-TSCGGGCCCHHHHHHHHH
T ss_pred cccCCCceecCcCCCCCCCccCCCCchHHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcC-CCCCCCCCCHHHHHHHHH
Confidence 3579999999999999999999999999999999999999999999999999999999997 578999999999999998
Q ss_pred HhCCCCCCCCCCccccCCCc-ccCCCCCCCceEEeeeEEecCCCcHHHHHHHHHhCCCeEEEEec-ccccccCCCeEeCC
Q psy12185 215 VNKVVLEPESEYPLLLKDAA-CKRKATSPNGVKIKSYTCDTLIPSESSILTDIATHGPVIAAVNA-LTWQYYLGGVIQYN 292 (317)
Q Consensus 215 ~~~~Gi~~e~~yPY~~~~~~-C~~~~~~~~~~~i~~~~~~~~~~~~~~i~~al~~~gPv~v~i~~-~~f~~Y~~GIy~~~ 292 (317)
++ .|+++|++|||.+..+. |...... ..++|++|..+. ..++++||++| |||+|+|++ ++|++|++|||+..
T Consensus 96 ~~-~Gi~~e~~yPY~~~~~~~C~~~~~~-~~~~i~~~~~v~-~~~~~~ik~~l---GPV~v~i~~~~~f~~Y~~Giy~~~ 169 (243)
T 3bwk_A 96 DL-GGLCSQDDYPYVSNLPETCNLKRCN-ERYTIKSYVSIP-DDKFKEALRYL---GPISISIAASDDFAFYRGGFYDGE 169 (243)
T ss_dssp HT-TSBCBTTTSCCCTTSCCCCCGGGCS-SCBCCCEEEECC-TTCHHHHHHHT---CCEEEEECCCHHHHTCCSSSCCCC
T ss_pred Hh-CCcccccccCCcCCCCCcCCCCCCc-cceeeeeEEEeC-CCCHHHHHHhh---CCEEEEEecChhHHhcCCceecCC
Confidence 74 69999999999998888 9876554 578899998765 56889999999 999999999 79999999999887
Q ss_pred CCCCCCCCCeEEEEEEeecCC
Q psy12185 293 CDGSLANINHAVQIVGYDNYS 313 (317)
Q Consensus 293 c~~~~~~~~Hav~iVGyg~~~ 313 (317)
|+.. ++|||+|||||+++
T Consensus 170 c~~~---~~HaV~iVGyg~~~ 187 (243)
T 3bwk_A 170 CGAA---PNHAVILVGYGMKD 187 (243)
T ss_dssp CCSS---CCEEEEEEEEEEEE
T ss_pred CCCc---CCeEEEEEEecCcc
Confidence 8753 79999999999874
No 32
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1
Probab=100.00 E-value=1.5e-48 Score=340.40 Aligned_cols=169 Identities=33% Similarity=0.573 Sum_probs=149.8
Q ss_pred CCceeecccCCCCCCCcCCCCCccHHHHHHHHHHHHHHHHHcCCCccCCHHHHhhcCCCCCCCCCCCchHHHHHHHHHhC
Q psy12185 138 IPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEVIDCAGNGNMGCSGGDFCALLDWMDVNK 217 (317)
Q Consensus 138 lP~~~DwR~~g~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~gC~GG~~~~a~~y~~~~~ 217 (317)
||++||||++|+|+||||||.||||||||+++++|++++|+++..++||+|+|+||+. .+.||+||++..|++|+.+
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~~~~~-- 77 (213)
T 3ioq_A 1 IPTSIDWRQKGAVTPVRNQGGCGSCWTFSSVAAVEGINKIVTGQLLSLSEQELLDCER-RSYGCRGGFPLYALQYVAN-- 77 (213)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHH--
T ss_pred CCCCCCcccCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCcccCHHHhhhhcC-CCCCCCCCCHHHHHHHHHH--
Confidence 6999999999999999999999999999999999999999999999999999999998 7899999999999999988
Q ss_pred CCCCCCCCCccccCCCcccCCCCCCCceEEeeeEEecCCCcHHHHHHHHHhCCCeEEEEec--ccccccCCCeEeCCCCC
Q psy12185 218 VVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSILTDIATHGPVIAAVNA--LTWQYYLGGVIQYNCDG 295 (317)
Q Consensus 218 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~~~~~~~~~~i~~al~~~gPv~v~i~~--~~f~~Y~~GIy~~~c~~ 295 (317)
.|+++|++|||.+..+.|.........+++.+|..+. ..+++.+++++ .+|||+|+|++ ++|++|++|||...|..
T Consensus 78 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~-~~~~~~~~~~~-~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~ 155 (213)
T 3ioq_A 78 SGIHLRQYYPYEGVQRQCRASQAKGPKVKTDGVGRVP-RNNEQALIQRI-AIQPVSIVVEAKGRAFQNYRGGIFAGPCGT 155 (213)
T ss_dssp HCEEBGGGSCCCSSCCCCCGGGCCSCEECCCEEEECC-SSCHHHHHHHH-TTSCEEEEECCCSHHHHTCCSSEECCSCCS
T ss_pred cCCCchhccCcCCCCCCCCCCccCCceEEeccEEEeC-CchHHHHHHHH-HhCCEEEEEEechhhhhhccCCeEcCCCCC
Confidence 4999999999999999998744322567889998775 45566666665 56999999999 58999999999987754
Q ss_pred CCCCCCeEEEEEEeecCCCee
Q psy12185 296 SLANINHAVQIVGYDNYSRTW 316 (317)
Q Consensus 296 ~~~~~~Hav~iVGyg~~~~~W 316 (317)
. ++|||+|||||+ +||
T Consensus 156 ~---~~HaV~iVGyg~--~yW 171 (213)
T 3ioq_A 156 S---IDHAVAAVGYGN--DYI 171 (213)
T ss_dssp C---CCEEEEEEEEET--TEE
T ss_pred c---cCceEEEEecCC--CeE
Confidence 3 799999999997 666
No 33
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0
Probab=100.00 E-value=1.1e-48 Score=343.27 Aligned_cols=172 Identities=30% Similarity=0.628 Sum_probs=149.6
Q ss_pred CCceeecccCCCCCCCcCCCCCccHHHHHHHHHHHHHHHHHcCCCccCCHHHHhhcCCCCCCCCCCCchHHHHHHHHHhC
Q psy12185 138 IPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEVIDCAGNGNMGCSGGDFCALLDWMDVNK 217 (317)
Q Consensus 138 lP~~~DwR~~g~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~gC~GG~~~~a~~y~~~~~ 217 (317)
||++||||++|+|+||||||.||||||||++++||++++|++++.+.||+|+|+||+. .+.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGSCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~~~~~~- 78 (222)
T 3u8e_A 1 APASIDWRKKGAVTSVKDQGACGMCWAFGATGAIEGIDAITTGRLISVSEQQIVDCDT-XXXXXXGGDADDAFRWVITN- 78 (222)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSCSSCTTTTHHHHHHHHHHHHHSCCCCBCHHHHHHHCC-------CCCHHHHHHHHHHH-
T ss_pred CCCcCcCCcCCCCCCcccCCCCccHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhccC-cccccCCCCHHHHHHHHHHc-
Confidence 6999999999999999999999999999999999999999999999999999999998 58999999999999999884
Q ss_pred CCCCCCCCCccccCCCcccCCCCCCCceEEeeeEEecCCCcHHHHHHHHHhCCCeEEEEec-c-cccccCC-CeEeC-CC
Q psy12185 218 VVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSILTDIATHGPVIAAVNA-L-TWQYYLG-GVIQY-NC 293 (317)
Q Consensus 218 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~~~~~~~~~~i~~al~~~gPv~v~i~~-~-~f~~Y~~-GIy~~-~c 293 (317)
.||++|++|||.+..+.|...... .++|++|..+. .++++||++|. +|||+|+|++ . +|++|++ |||+. .|
T Consensus 79 ~Gi~~e~~yPY~~~~~~C~~~~~~--~~~i~~~~~v~--~~~~~i~~~l~-~GPV~v~i~~~~~~f~~Y~~~Giy~~~~~ 153 (222)
T 3u8e_A 79 GGIASDANYPYTGVDGTCDLNKPI--AARIDGYTNVP--NSSSALLDAVA-KQPVSVNIYTSSTSFQLYTGPGIFAGSSC 153 (222)
T ss_dssp TCBCBTTTSCCCSSCCCCCCCSCC--CBCCCEEEECC--SCHHHHHHHHH-HSCEEEEECCCSHHHHTCCCSSCBCCTTC
T ss_pred CCccchhcCCCcccCCccccCCCC--eEEEccEEEeC--CcHHHHHHHHh-CCCEEEEEEecChhhhcEeCCceECCCcc
Confidence 599999999999999999876543 67889998765 78899999995 6999999999 4 8999999 99998 78
Q ss_pred CCCCCCCCeEEEEEEeecCC---Cee
Q psy12185 294 DGSLANINHAVQIVGYDNYS---RTW 316 (317)
Q Consensus 294 ~~~~~~~~Hav~iVGyg~~~---~~W 316 (317)
......++|||+|||||+++ +||
T Consensus 154 ~~~~~~~~HaV~iVGyg~~~~g~~yW 179 (222)
T 3u8e_A 154 SDDPATVDHTVLIVGYGSNGTNADYW 179 (222)
T ss_dssp CCCGGGCCEEEEEEEEEESSTTCEEE
T ss_pred cCCCCcCCEEEEEEEEeecCCCCcEE
Confidence 76322379999999999876 477
No 34
>3f5v_A DER P 1 allergen; allergy, asthma, DUST mites, glycoprotein, hydrola protease, secreted, thiol protease; HET: P6G; 1.36A {Dermatophagoides pteronyssinus} PDB: 2as8_A 3rvw_A* 3rvx_A 3rvv_A* 3d6s_A*
Probab=100.00 E-value=3.9e-48 Score=340.00 Aligned_cols=173 Identities=26% Similarity=0.435 Sum_probs=154.8
Q ss_pred CCCCCceeecccCCCCCCCcCCCCCccHHHHHHHHHHHHHHHHHcCCCccCCHHHHhhcCCCCCCCCCCCchHHHHHHHH
Q psy12185 135 PTGIPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEVIDCAGNGNMGCSGGDFCALLDWMD 214 (317)
Q Consensus 135 ~~~lP~~~DwR~~g~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~gC~GG~~~~a~~y~~ 214 (317)
..+||++||||++|+|+||||||.||||||||+++++|++++++++..++||+|+|+||+. +.||+||++..|++|+.
T Consensus 7 ~~~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~~~~~~~~~lS~q~l~dc~~--~~gC~GG~~~~a~~~~~ 84 (222)
T 3f5v_A 7 NGNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRQQSLDLAEQELVDCAS--QHGCHGDTIPRGIEYIQ 84 (222)
T ss_dssp CCCCCSCEEHHHHTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC--SSTTBCCCHHHHHHHHH
T ss_pred ccCCCCCCCCccCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhCcC--CCCCCCCCHHHHHHHHH
Confidence 3579999999999999999999999999999999999999999999999999999999997 88999999999999998
Q ss_pred HhCCCCCCCCCCccccCCCcccCCCCCCCceEEeeeEEecCCCcHHHHHHHHHh-CCCeEEEEec---ccccccCCCeEe
Q psy12185 215 VNKVVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSILTDIAT-HGPVIAAVNA---LTWQYYLGGVIQ 290 (317)
Q Consensus 215 ~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~~~~~~~~~~i~~al~~-~gPv~v~i~~---~~f~~Y~~GIy~ 290 (317)
+ .|+++|++|||.+..+.|. .... ..+++++|..+. ..++++||++|++ +|||+|+|++ ++|++|++|||.
T Consensus 85 ~--~Gi~~e~~yPY~~~~~~C~-~~~~-~~~~i~~~~~v~-~~~~~~ik~~l~~~~gpV~v~~~~~~~~~f~~Y~~gi~~ 159 (222)
T 3f5v_A 85 H--NGVVQESYYRYVAREQSCR-RPNA-QRFGISNYCQIY-PPNANKIREALAQTHSAIAVIIGIKDLDAFRHYDGRTII 159 (222)
T ss_dssp H--HCEEBGGGSCCCSSCCCCC-CCSS-CEECCSEEEECC-SCCHHHHHHHHHHHCCCEEEEEEESCHHHHHTCCSSSCB
T ss_pred H--cCCCchhhCCCcccCCCcc-CCcC-cceeeccEEEeC-CCCHHHHHHHHHhcCCCEEEEEEeccchhhhccCCCcee
Confidence 8 5999999999999999998 3344 578899998764 5689999999999 8999999988 479999999876
Q ss_pred C-CCCCCCCCCCeEEEEEEeecCC--Cee
Q psy12185 291 Y-NCDGSLANINHAVQIVGYDNYS--RTW 316 (317)
Q Consensus 291 ~-~c~~~~~~~~Hav~iVGyg~~~--~~W 316 (317)
. .|.... ++|||+|||||+++ +||
T Consensus 160 ~~~~~~~~--~~HaV~iVGyg~~~g~~yw 186 (222)
T 3f5v_A 160 QRDNGYQP--NYHAVNIVGYSNAQGVDYW 186 (222)
T ss_dssp CCCCSSSC--EEEEEEEEEEEEETTEEEE
T ss_pred cCCCCCCc--cCcEEEEEEEeccCCCEEE
Confidence 4 554443 89999999999875 377
No 35
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0
Probab=100.00 E-value=2.5e-48 Score=341.72 Aligned_cols=170 Identities=34% Similarity=0.670 Sum_probs=154.4
Q ss_pred CCCCceeecccCCCCCCCcCCCCCccHHHHHHHHHHHHHHHHHcCCCccCCHHHHhhcCCC-CCCCCCCCchHHHHHHHH
Q psy12185 136 TGIPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEVIDCAGN-GNMGCSGGDFCALLDWMD 214 (317)
Q Consensus 136 ~~lP~~~DwR~~g~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~-~~~gC~GG~~~~a~~y~~ 214 (317)
.+||++||||++|+|+||||||.||||||||++++||+++++++++.+.||+|+|+||+.. ++.||+||++..|++|+.
T Consensus 5 ~~lP~~~Dwr~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gC~GG~~~~a~~~~~ 84 (224)
T 3f75_A 5 SELPAGVDWRSRGCVTPVKDQRDCGSCWAFSTTGALEGAHCAKTGKLVSLSEQELMDCSRAEGNQSCSGGEMNDAFQYVL 84 (224)
T ss_dssp GGSCSCEEHHHHTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGGGCBCHHHHHHHHH
T ss_pred cCCCCceecccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCCceeCHHHHhhcccCCCCCCCCCCCHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999999873 378999999999999998
Q ss_pred HhCCCCCCCCCCccccCCCcccCCCCCCCceEEeeeEEecCCCcHHHHHHHHHhCCCeEEEEec-c-cccccCCCeEeCC
Q psy12185 215 VNKVVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSILTDIATHGPVIAAVNA-L-TWQYYLGGVIQYN 292 (317)
Q Consensus 215 ~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~~~~~~~~~~i~~al~~~gPv~v~i~~-~-~f~~Y~~GIy~~~ 292 (317)
++ +|+++|++|||.+.++.|...... ...++++|..+. ..++++||++|+ +|||+|+|++ . +|++|++|||++.
T Consensus 85 ~~-~Gi~~e~~yPY~~~~~~C~~~~~~-~~~~i~~~~~~~-~~~~~~l~~~l~-~gPV~v~i~~~~~~f~~y~~Giy~~~ 160 (224)
T 3f75_A 85 DS-GGICSEDAYPYLARDEECRAQSCE-KVVKILGFKDVP-RRSEAAMKAALA-KSPVSIAIEADQMPFQFYHEGVFDAS 160 (224)
T ss_dssp HH-TCBCBTTTSCCCSSCCCCCGGGSC-CCBCCSEEEECC-SSCHHHHHHHHH-HSCEEEEECCCSHHHHTEEEEEECCC
T ss_pred Hh-CCccccccCCCcCCCCCCCcCCCC-ceEEeccEEEeC-CChHHHHHHHHc-CCCEEEEEeccchhhhcCccceECCC
Confidence 74 699999999999999999876655 567789998775 568899999998 8999999999 4 8999999999977
Q ss_pred CCCCCCCCCeEEEEEEeecC
Q psy12185 293 CDGSLANINHAVQIVGYDNY 312 (317)
Q Consensus 293 c~~~~~~~~Hav~iVGyg~~ 312 (317)
|... ++|||+|||||++
T Consensus 161 ~~~~---~~Hav~iVGyg~~ 177 (224)
T 3f75_A 161 CGTD---LDHGVLLVGYGTD 177 (224)
T ss_dssp CCCC---CCEEEEEEEEEEE
T ss_pred CCCc---cCeEEEEEEEecc
Confidence 8533 7999999999987
No 36
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ...
Probab=100.00 E-value=7.1e-46 Score=333.92 Aligned_cols=174 Identities=25% Similarity=0.429 Sum_probs=143.3
Q ss_pred CCCCceeecccC----CCCCCCcCCCCCccHHHHHHHHHHHHHHHHHcC--CCccCCHHHHhhcCCC-CCCCCCCCchHH
Q psy12185 136 TGIPVKKDWREA----GIIGKVRNQQTCGACWAFSTVETAESMHALKNG--TLSLLSVQEVIDCAGN-GNMGCSGGDFCA 208 (317)
Q Consensus 136 ~~lP~~~DwR~~----g~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~--~~~~lS~q~l~dC~~~-~~~gC~GG~~~~ 208 (317)
.+||++||||++ |.|+||||||.||||||||++++||++++|+++ ..+.||+|+|+||+.. .+.||+||++..
T Consensus 5 ~~lP~~~D~R~~w~~~~~vt~VkdQg~CGSCWAfa~~~ale~~~~i~~~~~~~~~LS~q~lvdC~~~~~~~gC~GG~~~~ 84 (266)
T 3cbj_A 5 LKLPASFDAREQWPQCPTIKEIRDQGSCGSAWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAE 84 (266)
T ss_dssp CCCCSCEEHHHHSTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHCGGGGBCTTBCBCHHH
T ss_pred CCCCccCcchhccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHhCCCCccccCHHHHHhhccccCCCCCCCCCHHH
Confidence 478999999976 789999999999999999999999999999876 4799999999999853 368999999999
Q ss_pred HHHHHHHhCCCCCC-------CCCCccc---------cCCCcccCCCC---------C--C------CceEEeeeEEecC
Q psy12185 209 LLDWMDVNKVVLEP-------ESEYPLL---------LKDAACKRKAT---------S--P------NGVKIKSYTCDTL 255 (317)
Q Consensus 209 a~~y~~~~~~Gi~~-------e~~yPY~---------~~~~~C~~~~~---------~--~------~~~~i~~~~~~~~ 255 (317)
||+|+.+ .|+++ |++|||. +..+.|..... . . ..+.+..| .+
T Consensus 85 a~~y~~~--~Gi~~~~~Y~~~e~~~PY~~~~~~~~~~~~~~~C~~~~~~p~c~~~c~~~~~~~~~~~~~~~~~~~-~v-- 159 (266)
T 3cbj_A 85 AWNFWTR--KGLVSGGLYESHVGCRPYSIPPCEAHVNGARPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSY-SV-- 159 (266)
T ss_dssp HHHHHHH--TCBCBCCSTTCCCSSSCCCSCCCSCCCSCSSCCCCSCCCCCCCCCSCCTTCCSCTGGGCBCBSCCE-EC--
T ss_pred HHHHHHH--hCcCcCccccccccccCcccccccccccCCCCCCccccCCCccccccCCCCcceeeeeeeeeeeeE-Ee--
Confidence 9999987 69999 9999998 34566743100 0 0 01122223 33
Q ss_pred CCcHHHHHHHHHhCCCeEEEEec-ccccccCCCeEeCCCCCCCCCCCeEEEEEEeecCCC--ee
Q psy12185 256 IPSESSILTDIATHGPVIAAVNA-LTWQYYLGGVIQYNCDGSLANINHAVQIVGYDNYSR--TW 316 (317)
Q Consensus 256 ~~~~~~i~~al~~~gPv~v~i~~-~~f~~Y~~GIy~~~c~~~~~~~~Hav~iVGyg~~~~--~W 316 (317)
..++++||++|+++|||+|+|++ ++|++|++|||.+.|+... ++|||+|||||+++| ||
T Consensus 160 ~~~~~~i~~~i~~~GPV~v~i~~~~~f~~Y~~Gvy~~~~~~~~--~~HaV~iVGyg~~~g~~yW 221 (266)
T 3cbj_A 160 SNSEKDIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVTGEMM--GGHAIRILGWGVENGTPYW 221 (266)
T ss_dssp CSCHHHHHHHHHHHCCEEEEEEEEGGGGGCCSSEECCCSSCEE--EEEEEEEEEEEEETTEEEE
T ss_pred CCCHHHHHHHHHhcCCEEEEEEeccchhhcCCeEEecCCCCcc--CCeEEEEEEecccCCceEE
Confidence 36899999999999999999999 8999999999998765533 699999999998753 77
No 37
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A*
Probab=100.00 E-value=8.4e-46 Score=331.38 Aligned_cols=173 Identities=27% Similarity=0.457 Sum_probs=142.3
Q ss_pred CCCceeecccC----CCCCCCcCCCCCccHHHHHHHHHHHHHHHHHcC--CCccCCHHHHhhcCCCCCCCCCCCchHHHH
Q psy12185 137 GIPVKKDWREA----GIIGKVRNQQTCGACWAFSTVETAESMHALKNG--TLSLLSVQEVIDCAGNGNMGCSGGDFCALL 210 (317)
Q Consensus 137 ~lP~~~DwR~~----g~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~--~~~~lS~q~l~dC~~~~~~gC~GG~~~~a~ 210 (317)
+||++||||++ ++|+||||||.||||||||++++||++++|+++ ..+.||+|+|+||+...+.||+||++..||
T Consensus 2 ~lP~s~D~R~~~~~~~~vtpVkdQg~CGSCWAFaa~~ale~~~~i~~~~~~~~~LSeQ~lvdC~~~~~~GC~GG~~~~a~ 81 (254)
T 3qsd_A 2 EIPSSFDSRKKWPRCKSIATIRDQSRCGSCWAFGAVEAMSDRSCIQSGGKQNVELSAVDLLSCCESCGLGCEGGILGPAW 81 (254)
T ss_dssp CCCSCEEHHHHCTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTCCCCCBCHHHHHHHCTTSBCTTBCBCHHHHH
T ss_pred CCCCcCccccccCCCCccCCCCCcccCccHHHHHHHHHHHHHHHHHhCCCccccCCHHHHHhhhcCCCCCCCCCCHHHHH
Confidence 58999999987 689999999999999999999999999999987 689999999999987557899999999999
Q ss_pred HHHHHhCCCCCCCCCC-------ccc---------cCCCcccCCCC--------CCCce----------EEeeeEEecCC
Q psy12185 211 DWMDVNKVVLEPESEY-------PLL---------LKDAACKRKAT--------SPNGV----------KIKSYTCDTLI 256 (317)
Q Consensus 211 ~y~~~~~~Gi~~e~~y-------PY~---------~~~~~C~~~~~--------~~~~~----------~i~~~~~~~~~ 256 (317)
+|+++ .||++|++| ||. +..+.|..... ..... ....| .+ .
T Consensus 82 ~yi~~--~Gi~~e~~y~~~~~c~PY~~~~c~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~-~~--~ 156 (254)
T 3qsd_A 82 DYWVK--EGIVTGSSKENHAGCEPYPFPKCEHHTKGKYPPCGSKIYKTPRCKQTCQKKYKTPYTQDKHRGKSSY-NV--K 156 (254)
T ss_dssp HHHHH--TCBCBCCCTTTCCSSSCCSSCCCBCSSCSSSCBCCSCCCCCCCCCCCCCTTCCSCGGGGCBCCSEEE-EC--C
T ss_pred HHHHH--cCCCcccccccCcCcCCcccccccccccCcCCCCcccccCCccccccccCCccceeeeeeeeeeeeE-ec--C
Confidence 99988 599999888 997 44556642110 00000 11112 22 3
Q ss_pred CcHHHHHHHHHhCCCeEEEEec-ccccccCCCeEeCCCCCCCCCCCeEEEEEEeecCCC--ee
Q psy12185 257 PSESSILTDIATHGPVIAAVNA-LTWQYYLGGVIQYNCDGSLANINHAVQIVGYDNYSR--TW 316 (317)
Q Consensus 257 ~~~~~i~~al~~~gPv~v~i~~-~~f~~Y~~GIy~~~c~~~~~~~~Hav~iVGyg~~~~--~W 316 (317)
.++++||++|+++|||+|+|++ ++|++|++|||...|.... ++|||+|||||++++ ||
T Consensus 157 ~~~~~i~~~l~~~gPv~~~~~~~~~f~~y~~Gi~~~~~~~~~--~~Hav~iVGyg~~~g~~yw 217 (254)
T 3qsd_A 157 NDEKAIQKEIMKYGPVEAGFTVYEDFLNYKSGIYKHITGETL--GGHAIRIIGWGVENKAPYW 217 (254)
T ss_dssp SCHHHHHHHHHHHCCEEEEEEEEGGGGGCCSSEECCCSSCEE--EEEEEEEEEEEEETTEEEE
T ss_pred CcHHHHHHHHHHcCCEEEEEEeccccccccCCeeccCCCCCC--CCeEEEEEEEeecCCeeEE
Confidence 5899999999999999999999 8999999999998665433 699999999998764 67
No 38
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A
Probab=100.00 E-value=2.7e-45 Score=331.55 Aligned_cols=172 Identities=27% Similarity=0.527 Sum_probs=147.9
Q ss_pred CCCCCceeecccC---CCCCCCcCCC---CCccHHHHHHHHHHHHHHHHHcC-C--CccCCHHHHhhcCCCCCCCCCCCc
Q psy12185 135 PTGIPVKKDWREA---GIIGKVRNQQ---TCGACWAFSTVETAESMHALKNG-T--LSLLSVQEVIDCAGNGNMGCSGGD 205 (317)
Q Consensus 135 ~~~lP~~~DwR~~---g~v~~v~dQg---~CGsCwAfa~~~~le~~~~i~~~-~--~~~lS~q~l~dC~~~~~~gC~GG~ 205 (317)
..+||++||||++ |+|+|||||| .||||||||++++||++++|+++ . .+.||+|+|+||+. ..||+||+
T Consensus 33 ~~~lP~~~DwR~~~~~~~vtpVkdQg~~~~CGSCWAfa~~~alE~~~~i~~~g~~~~~~LS~Q~lvdC~~--~~gC~GG~ 110 (277)
T 1deu_A 33 PADLPKSWDWRNVDGVNYASITRNQHIPQYCGSCWAHASTSAMADRINIKRKGAWPSTLLSVQNVIDCGN--AGSCEGGN 110 (277)
T ss_dssp GGGSCSCEETTSBTTBCCCCCCCBTTCSSCCBCHHHHHHHHHHHHHHHHHTTTCSSCCCBCHHHHHHHSS--SEETBEEC
T ss_pred cccCCCceecccCCCCCcCCccccCCCCCCCcchHHHHHHHHHHHHHHHHhCCCCCCcccCHHHHHhCcC--CCCCCCCC
Confidence 3579999999997 6899999999 99999999999999999999986 3 47999999999986 48999999
Q ss_pred hHHHHHHHHHhCCCCCCCCCCccccCCCcccC-C--------------CCCCCceEEeeeEEecCCCcHHHHHHHHHhCC
Q psy12185 206 FCALLDWMDVNKVVLEPESEYPLLLKDAACKR-K--------------ATSPNGVKIKSYTCDTLIPSESSILTDIATHG 270 (317)
Q Consensus 206 ~~~a~~y~~~~~~Gi~~e~~yPY~~~~~~C~~-~--------------~~~~~~~~i~~~~~~~~~~~~~~i~~al~~~g 270 (317)
+..||+|+.+ .||++|++|||.+.++.|.. + ... ..+++.+|..+. ++++||++|+++|
T Consensus 111 ~~~a~~yi~~--~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~c~~~~~~-~~~~i~~y~~v~---~~~~i~~~i~~~G 184 (277)
T 1deu_A 111 DLSVWDYAHQ--HGIPDETCNNYQAKDQECDKFNQCGTCNEFKECHAIRNY-TLWRVGDYGSLS---GREKMMAEIYANG 184 (277)
T ss_dssp HHHHHHHHHH--TCBCBGGGSCCCSSCCCCCHHHHSEEEEETTEEEECSSC-CCBCEEEEEEEC---SHHHHHHHHHHHC
T ss_pred HHHHHHHHHH--cCCCcCccCCCcCCCCCccccccccccccCcccccccCc-ceEEeceeEecC---CHHHHHHHHHHcC
Confidence 9999999987 69999999999998888873 1 111 346778887653 5889999999999
Q ss_pred CeEEEEec-ccccccCCCeEeCCCCCCCCCCCeEEEEEEeecCC--Cee
Q psy12185 271 PVIAAVNA-LTWQYYLGGVIQYNCDGSLANINHAVQIVGYDNYS--RTW 316 (317)
Q Consensus 271 Pv~v~i~~-~~f~~Y~~GIy~~~c~~~~~~~~Hav~iVGyg~~~--~~W 316 (317)
||+|+|++ ++|++|++|||+..+.... ++|||+|||||+++ +||
T Consensus 185 PV~v~i~~~~~f~~Y~~GIy~~~~~~~~--~~HaV~iVGyg~~~g~~YW 231 (277)
T 1deu_A 185 PISCGIMATERLANYTGGIYAEYQDTTY--INHVVSVAGWGISDGTEYW 231 (277)
T ss_dssp CEEEEECCCHHHHTCCSSEECBCCSCCC--CCEEEEEEEEEEETTEEEE
T ss_pred CEEEEEecccccccCcCcEECCCCCCCc--CCeEEEEEEecccCCccEE
Confidence 99999999 8999999999987543333 89999999999875 477
No 39
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa}
Probab=100.00 E-value=4.2e-42 Score=313.06 Aligned_cols=213 Identities=15% Similarity=0.132 Sum_probs=154.3
Q ss_pred eEEecCcCCCCCHHHHHHhhhcccccccccccCCCCCCCCCccccccccccCCCCCCCCCceeecccCCCCCCCcCCCCC
Q psy12185 80 ARYGITEFSDLSEEEFKTRHLRHSVNKHVLMSHHKHHDHHHNHVKKRSITTGITIPTGIPVKKDWREAGIIGKVRNQQTC 159 (317)
Q Consensus 80 ~~~g~N~fsD~t~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~DwR~~g~v~~v~dQg~C 159 (317)
..-.+|++.++..|.| ++.++..+. ++. .....+..+. ....+||++||||+++ ||||||.|
T Consensus 14 ~~~~~~~~~~~~~~~~--~~~lG~~p~--~~d-~rd~~~~~~~----------~~~~~lP~s~DwR~~~---pVkdQG~C 75 (291)
T 3ois_A 14 LVPRGSHMQTVLKRRK--KSGYGYIPD--IAD-IRDFSYTPEK----------SVIAALPPKVDLTPPF---QVYDQGRI 75 (291)
T ss_dssp ---------CCCCCCC--CTTCCEECC--CCC-TTCCBCCCCH----------HHHHTCCSEEECCCSS---CCCBCTTS
T ss_pred cccchhhHhHhhhccc--cccCCCCCC--CCc-ccccccCCCc----------cccccCCcceecccCC---CcccCCCC
Confidence 4456789999999988 444444331 111 1111111100 0124799999999984 99999999
Q ss_pred ccHHHHHHHHHHHHHHHHHcCCCccCCHHHHh--hcCCC--C-CCCCCCCchHHHHHHHHHhCCCCCCCCCCccccCC--
Q psy12185 160 GACWAFSTVETAESMHALKNGTLSLLSVQEVI--DCAGN--G-NMGCSGGDFCALLDWMDVNKVVLEPESEYPLLLKD-- 232 (317)
Q Consensus 160 GsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~--dC~~~--~-~~gC~GG~~~~a~~y~~~~~~Gi~~e~~yPY~~~~-- 232 (317)
|||||||+++++|++++ +++..+.||+|+|+ +|... + ..+|.||++..||+|+.+ .||++|++|||.+..
T Consensus 76 GSCWAFAa~~alE~~~~-~~g~~~~lS~q~l~~~~c~~~~~~~~~~c~GG~~~~A~~yi~~--~Gi~~e~~yPY~~~~~~ 152 (291)
T 3ois_A 76 GSCTANALAAAIQFERI-HDKQSPEFIPSRLFIYYNERKIEGHVNYDSGAMIRDGIKVLHK--LGVCPEKEWPYGDTPAD 152 (291)
T ss_dssp SCHHHHHHHHHHHHHHH-HTTCSSCCCBCHHHHHHHHHHHSSCTTSCCCEEHHHHHHHHHH--TCCCBGGGSCCCCCCCC
T ss_pred ccHHHHHHHHHHHHHHH-HhCCCCCcCcCHHHHHhhhhhhhcCCCCCCCcCHHHHHHHHHH--hCCCCHhhCCCCCCccc
Confidence 99999999999999886 56778899999999 68631 3 346889999999999987 599999999999874
Q ss_pred -CcccCCC------C-------CCCceEEeeeEEecCCCcHHHHHHHHHhCCCeEEEEec-ccccccCC--CeEeC-CCC
Q psy12185 233 -AACKRKA------T-------SPNGVKIKSYTCDTLIPSESSILTDIATHGPVIAAVNA-LTWQYYLG--GVIQY-NCD 294 (317)
Q Consensus 233 -~~C~~~~------~-------~~~~~~i~~~~~~~~~~~~~~i~~al~~~gPv~v~i~~-~~f~~Y~~--GIy~~-~c~ 294 (317)
+.|...+ . ....+++++|..+. .++++||++|+++|||+|+|++ ++|+.|++ |||.. .|.
T Consensus 153 ~~~C~~~~~~~~~~~p~~~C~~~~~~~~i~~y~~v~--~~e~~i~~al~~~gPV~v~~~~~~~f~~y~~~~Gi~~~~~~~ 230 (291)
T 3ois_A 153 PRTEEFPPGAPASKKPSDQCYKDAQNYKITEYSRVA--QDIDHLKACLAVGSPFVFGFSVYNSWVGNNSLPVRIPLPTKN 230 (291)
T ss_dssp TTTCSCCTTCGGGSCCCHHHHHHHGGGCCCEEEECC--SCHHHHHHHHHTTCCEEEEEEEEHHHHGGGCCCSBCCCCCTT
T ss_pred cccccccccccccCCCCHHHHhhcccceeccEEEcC--cCHHHHHHHHHcCCCEEEEEEeccchhhcCCCCeEEeCCCCC
Confidence 4565421 0 00356788998765 4899999999999999999999 89999998 99987 454
Q ss_pred CCCCCCCeEEEEEEeecCCCee
Q psy12185 295 GSLANINHAVQIVGYDNYSRTW 316 (317)
Q Consensus 295 ~~~~~~~Hav~iVGyg~~~~~W 316 (317)
... .++|||+|||||+..+||
T Consensus 231 ~~~-~~~Hav~iVGy~~~~~yw 251 (291)
T 3ois_A 231 DTL-EGGHAVLCVGYDDEIRHF 251 (291)
T ss_dssp SCE-EEEEEEEEEEEETTTTEE
T ss_pred CCC-cCCeEEEEEEEeCCCCEE
Confidence 321 259999999999877788
No 40
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X
Probab=100.00 E-value=4.8e-41 Score=302.47 Aligned_cols=170 Identities=26% Similarity=0.405 Sum_probs=134.1
Q ss_pred ceeecccC-CCCC--CCcCCCCCccHHHHHHHHHHHHHHHHHcCCCccCCHHHHhhcCCC-CCCCCCCCchH-HHHHHHH
Q psy12185 140 VKKDWREA-GIIG--KVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEVIDCAGN-GNMGCSGGDFC-ALLDWMD 214 (317)
Q Consensus 140 ~~~DwR~~-g~v~--~v~dQg~CGsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~-~~~gC~GG~~~-~a~~y~~ 214 (317)
...|||++ |+++ ||||||.||||||||++++||++++|+++..+.||+|+|+||+.. .+.||+||... .++.|+.
T Consensus 9 ~~~dWR~~~~~~~it~VkdQg~CGSCWAFaa~~alE~~~~i~~~~~~~LS~Q~lvdC~~~~~~~GC~GG~~~~~~~~~i~ 88 (265)
T 2wbf_X 9 YCNRLKDENNCISNLQVEDQGNCDTSWIFASKYHLETIRCMKGYEPTKISALYVANCYKGEHKDRCDEGSSPMEFLQIIE 88 (265)
T ss_dssp CBCGGGCTTSTGGGSCCCBCTTSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHCCSSSCCCTTTCCCCHHHHHHHHH
T ss_pred HHHhhccCCCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHhhcccCCCCCCCCCCHHHHHHHHH
Confidence 45899998 6877 999999999999999999999999999999999999999999863 47899999755 4567776
Q ss_pred HhCCCCCCCCCCccccC--CCcccCCCC----------------CCCceEEeeeEEecC---CCc----HHHHHHHHHhC
Q psy12185 215 VNKVVLEPESEYPLLLK--DAACKRKAT----------------SPNGVKIKSYTCDTL---IPS----ESSILTDIATH 269 (317)
Q Consensus 215 ~~~~Gi~~e~~yPY~~~--~~~C~~~~~----------------~~~~~~i~~~~~~~~---~~~----~~~i~~al~~~ 269 (317)
++ +||++|++|||.+. .+.|+.... .+..+++++|..+.. ..+ +++||++|+++
T Consensus 89 ~~-Ggi~~e~~yPY~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ik~~i~~~ 167 (265)
T 2wbf_X 89 DY-GFLPAESNYPYNYVKVGEQCPKVEDHWMNLWDNGKILHNKNEPNSLDGKGYTAYESERFHDNMDAFVKIIKTEVMNK 167 (265)
T ss_dssp HH-CCCCBTTTSCCCGGGTTSCCCCCCTTCCCTTTTCEECCCCCSSSTTCCSSEEEEEGGGGTTCHHHHHHHHHHHHHHH
T ss_pred Hc-CCCCCccccCCcCCCCCCCCCCccccccccccccccccccCCCceeecCCceEeeccccccchhhHHHHHHHHHHhc
Confidence 64 45999999999864 577875421 112346777765531 123 37899999999
Q ss_pred CCeEEEEecccccccC-CCeEe-CCCCCCCCCCCeEEEEEEeecC
Q psy12185 270 GPVIAAVNALTWQYYL-GGVIQ-YNCDGSLANINHAVQIVGYDNY 312 (317)
Q Consensus 270 gPv~v~i~~~~f~~Y~-~GIy~-~~c~~~~~~~~Hav~iVGyg~~ 312 (317)
|||+|+|++.+|+.|+ +|+|. ..|+... ++|||+|||||++
T Consensus 168 GPV~v~i~~~~f~~y~~~g~~~~~~c~~~~--~~HaV~iVGyG~~ 210 (265)
T 2wbf_X 168 GSVIAYIKAENVMGYEFSGKKVKNLCGDDT--ADHAVNIVGYGNY 210 (265)
T ss_dssp SCEEEEECGGGGCSGGGGSSSEECCCCCSC--CCEEEEEEEEEEE
T ss_pred CCEEEEEEcccccccccCCcEEcCCCCCCc--CCEEEEEEEEeCC
Confidence 9999999997787774 44432 3687544 8999999999984
No 41
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A
Probab=99.97 E-value=1.2e-30 Score=247.03 Aligned_cols=93 Identities=18% Similarity=0.177 Sum_probs=84.0
Q ss_pred CCCceeecccCCCCCCCcCCCCCccHHHHHHHHHHHHHHHHH-cCCCccCCH----------------HHHhhcCCC---
Q psy12185 137 GIPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALK-NGTLSLLSV----------------QEVIDCAGN--- 196 (317)
Q Consensus 137 ~lP~~~DwR~~g~v~~v~dQg~CGsCwAfa~~~~le~~~~i~-~~~~~~lS~----------------q~l~dC~~~--- 196 (317)
..|..|+++....+|||+|||.||+|||||+++++|+.++++ +++.+.||+ |+|+||+..
T Consensus 47 ~~~~~F~~~~~~~~tpVknQg~cGsCWaFs~~~~le~~~~~k~~~~~~~lSe~yl~fwDKlEkan~flq~lidc~~~~~~ 126 (453)
T 2cb5_A 47 RAQHVFQHAVPQEGKPITNQKSSGRSWIFSCLNVMRLPFMKKLNIEEFEFSQSYLFFWDKVERCYFFLSAFVDTAQRKEP 126 (453)
T ss_dssp HCCCCCSEECSCCCSSCCBCCBSSCHHHHHHHHHHHHHHHHHTTCSCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCCceeeeeccCCCCcccCCCccchHhhhhHHHHHHHHHHHhcCCeEeeChHHHHHHHHHHHhhHHHHHHHHHHhccCC
Confidence 347789999888899999999999999999999999999999 578999999 999999752
Q ss_pred ----------CCCCCCCCchHHHHHHHHHhCCCCCCCCCCccccC
Q psy12185 197 ----------GNMGCSGGDFCALLDWMDVNKVVLEPESEYPLLLK 231 (317)
Q Consensus 197 ----------~~~gC~GG~~~~a~~y~~~~~~Gi~~e~~yPY~~~ 231 (317)
.+.||+||....+++|+.+ +||+++++|||+..
T Consensus 127 ~d~R~v~~l~~~~gcdGG~~~~a~~~i~k--yGl~p~~~yP~~~~ 169 (453)
T 2cb5_A 127 EDGRLVQFLLMNPANDGGQWDMLVNIVEK--YGVIPKKCFPESYT 169 (453)
T ss_dssp TTSHHHHHHHHCTTCSCBCHHHHHHHHHH--HCCCBGGGSCCCTG
T ss_pred cchhhHHHhcCCCCCCCCChHHHHHHHHH--cCccchhhcccccc
Confidence 3789999999999999976 79999999999863
No 42
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A
Probab=99.96 E-value=4.3e-30 Score=243.50 Aligned_cols=90 Identities=19% Similarity=0.199 Sum_probs=70.4
Q ss_pred CCCceeecccCCCCCCCcCCCCCccHHHHHHHHHHHHHHHHH-cCCCccCCH----------------HHHhhcCCC---
Q psy12185 137 GIPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALK-NGTLSLLSV----------------QEVIDCAGN--- 196 (317)
Q Consensus 137 ~lP~~~DwR~~g~v~~v~dQg~CGsCwAfa~~~~le~~~~i~-~~~~~~lS~----------------q~l~dC~~~--- 196 (317)
..|..|+|+..+.+|||||||.||+|||||+++++|+.++++ +++.+.||+ |+|+||+..
T Consensus 52 ~~~~~F~~~~~~~vtpVknQg~cGsCWaFs~~~~lE~~~~~~~~~~~~~LSe~yl~~~dklEkan~flq~lvdc~~~~~~ 131 (457)
T 2e01_A 52 QDNRVFNTVVSTDSTPVTNQKSSGRCWLFAATNQLRLNVLSELNLKEFELSQAYLFFYDKLEKANYFLDQIVSSADQDID 131 (457)
T ss_dssp HCCCCCSEECC------------CCHHHHHHHHHHHHHHHHHTTCSSCCBCHHHHHHHHHHHHHHHHHHHHHHTTTSCTT
T ss_pred CCCCceEEEecCCccCcccCCCCccchhHHhHHHHHHHHHHHhCCCceeeCChhhhhhhHHHHHHHHHHHHHHhcCCccc
Confidence 346788999888899999999999999999999999999999 778999999 788999852
Q ss_pred --------CCCCCCCCchHHHHHHHHHhCCCCCCCCCCcc
Q psy12185 197 --------GNMGCSGGDFCALLDWMDVNKVVLEPESEYPL 228 (317)
Q Consensus 197 --------~~~gC~GG~~~~a~~y~~~~~~Gi~~e~~yPY 228 (317)
.+.||+||....+++|+.+ +||++|++|||
T Consensus 132 ~r~v~~l~~~~gcdGG~~~~a~~~i~k--yGivpe~~yP~ 169 (457)
T 2e01_A 132 SRLVQYLLAAPTEDGGQYSMFLNLVKK--YGLIPKDLYGD 169 (457)
T ss_dssp SHHHHHHHHCTTCSCBCHHHHHHHHHH--HCCCBGGGSCS
T ss_pred chhhhhhccCCCCCCCCHHHHHHHHHH--cCccchhhcCC
Confidence 3789999999999999977 79999999999
No 43
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis}
Probab=99.89 E-value=4.3e-23 Score=191.57 Aligned_cols=77 Identities=27% Similarity=0.250 Sum_probs=71.8
Q ss_pred CCCCCcCCCCCccHHHHHHHHHHHHHHHHHcCCCccCCHHHHhhcCCC-----------CCCCCCCCchHHHHHHHHHhC
Q psy12185 149 IIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEVIDCAGN-----------GNMGCSGGDFCALLDWMDVNK 217 (317)
Q Consensus 149 ~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~-----------~~~gC~GG~~~~a~~y~~~~~ 217 (317)
.++||||||.||||||||+++++|+.+++++++.+.||+|+|+||+.. .+.||+||....|++|+.+
T Consensus 21 ~vtpVknQg~cGsCWaFSa~~~lE~~~~~k~~~~~~LSeq~Lvdcd~~ekan~~l~~~g~~~gcdGG~~~~a~~~i~k-- 98 (383)
T 3pw3_A 21 PITSVKNQNRAGTCWCYSSYSFLESELLRMGKGEYDLSEMFTVYNTYLDRADAAVRTHGDVSFSQGGSFYDALYGMET-- 98 (383)
T ss_dssp CCCCCCBCCBSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHHHHHHHHHHHHHTTTCSCCCSCCCHHHHHHHHHH--
T ss_pred CCCCcccCCCCcHHHHHHhHHHHHHHHHHHcCCCCccChHHHHhhchhhhhhhhhhhccCCCCCCCCCHHHHHHHHHH--
Confidence 489999999999999999999999999999999999999999999741 2579999999999999987
Q ss_pred CCCCCCCCCc
Q psy12185 218 VVLEPESEYP 227 (317)
Q Consensus 218 ~Gi~~e~~yP 227 (317)
+||++|++||
T Consensus 99 ~Givpe~~YP 108 (383)
T 3pw3_A 99 FGLVPEEEMR 108 (383)
T ss_dssp TCCCBGGGSC
T ss_pred cCcCcHHhCC
Confidence 7999999999
No 44
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii}
Probab=99.75 E-value=4.3e-18 Score=130.22 Aligned_cols=66 Identities=33% Similarity=0.502 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHhCCccCch-hHHHHHHHHHHHHHHHHHHhhcCCCCCCeEEecCcCCCCCHHHHHHhh
Q psy12185 31 EQKLELFSSFQQRYKKSYSKS-EHDIRFKNFEKSLDIIEELNKNRQSPESARYGITEFSDLSEEEFKTRH 99 (317)
Q Consensus 31 ~~~~~~f~~~~~~~~K~Y~~~-E~~~R~~iF~~n~~~I~~~N~~~~~~~~~~~g~N~fsD~t~eEf~~~~ 99 (317)
..+..+|++|+.+|+|.|.+. |+..|+.||++|+++|++||+ ...+|++|+|+|||||.+||.+.+
T Consensus 19 ~~~~~~F~~wk~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~hN~---~~~sy~lglN~FaDLT~eEF~~~~ 85 (106)
T 3f75_P 19 AHFQDAFSSFQAMYAKSYATEEEKQRRYAIFKNNLVYIHTHNQ---QGYSYSLKMNHFGDLSRDEFRRKY 85 (106)
T ss_dssp HHHHHHHHHHHHHHTCCCSSHHHHHHHHHHHHHHHHHHHHHHT---SCCSEEECCCTTTTCCHHHHHHHS
T ss_pred HHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHh---cCCCeeeCCcccccCCHHHHHHHH
Confidence 457889999999999999998 999999999999999999995 378999999999999999997644
No 45
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster}
Probab=99.71 E-value=1.4e-17 Score=121.80 Aligned_cols=64 Identities=25% Similarity=0.443 Sum_probs=56.8
Q ss_pred HHHHHHHHHHhCCccCch-hHHHHHHHHHHHHHHHHHHhhcC-CCCCCeEEecCcCCCCCHHHHHHhh
Q psy12185 34 LELFSSFQQRYKKSYSKS-EHDIRFKNFEKSLDIIEELNKNR-QSPESARYGITEFSDLSEEEFKTRH 99 (317)
Q Consensus 34 ~~~f~~~~~~~~K~Y~~~-E~~~R~~iF~~n~~~I~~~N~~~-~~~~~~~~g~N~fsD~t~eEf~~~~ 99 (317)
...|++|+.+|+|+|.+. |+..| .||++|++.|++||++. .+..+|++|+|+|+|||.+|| +.+
T Consensus 7 ~~~f~~~k~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlT~eEf-~~~ 72 (80)
T 2l95_A 7 DEEWVEYKSKFDKNYEAEEDLMRR-RIYAESKARIEEHNRKFEKGEVTWKMGINHLADLTPEEF-AQR 72 (80)
T ss_dssp HHHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHTTGGGTSCCCCCCCCGGGTSSHHHH-HHH
T ss_pred HHHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHhccCCCCeEecCcccccCCHHHH-HHH
Confidence 467999999999999988 99999 99999999999999752 346789999999999999999 543
No 46
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A
Probab=96.44 E-value=0.026 Score=45.93 Aligned_cols=109 Identities=13% Similarity=0.138 Sum_probs=74.2
Q ss_pred cCCCCCccHHHHHHHHHHHHHHHHH--------cCCCccCCHHHHhhcCCCCCCCCCCCchHHHHHHHHHhCCCCCCCCC
Q psy12185 154 RNQQTCGACWAFSTVETAESMHALK--------NGTLSLLSVQEVIDCAGNGNMGCSGGDFCALLDWMDVNKVVLEPESE 225 (317)
Q Consensus 154 ~dQg~CGsCwAfa~~~~le~~~~i~--------~~~~~~lS~q~l~dC~~~~~~gC~GG~~~~a~~y~~~~~~Gi~~e~~ 225 (317)
..||.=+=|-+|+.++.|-+..... ....+.+|+|+|.++ |..+...++|+.. .|-.
T Consensus 25 ETQg~~~WCa~Y~~aAilN~~~nt~~~nA~~iMr~~yPN~s~~~l~~t---------~~~~~q~Iky~~s--~G~~---- 89 (183)
T 1pxv_A 25 EQQFDNSWAAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPNC---------ATFPNQMIEYGKS--QGRD---- 89 (183)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHHTCSCCCHHHHHHHHSTTSCTTTGGGC---------CBCHHHHHHHHHH--TTCC----
T ss_pred eccCcCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhhc---------CCCHHHHHHHHHH--cCcC----
Confidence 3699999999999999887654211 113578999999885 4578899999975 4421
Q ss_pred CccccCCCcccCCCCCCCceEEeeeEEecCCCcHHHHHHHHHhCCCeEEEEecccccccCCCeEeCCCCCCCCCCCeEEE
Q psy12185 226 YPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSILTDIATHGPVIAAVNALTWQYYLGGVIQYNCDGSLANINHAVQ 305 (317)
Q Consensus 226 yPY~~~~~~C~~~~~~~~~~~i~~~~~~~~~~~~~~i~~al~~~gPv~v~i~~~~f~~Y~~GIy~~~c~~~~~~~~Hav~ 305 (317)
..+.. . ..+-+++++.+-++-||.+.-. +|+.. .+....+||++
T Consensus 90 -------------------~~~~n--r---~ls~neV~~~i~~Nk~I~v~~~---------~v~e~---~~~~~~gHA~a 133 (183)
T 1pxv_A 90 -------------------IHYQE--G---VPSYNQVDQLTKDNVGIMILAQ---------SVSQN---PNDPHLGHALA 133 (183)
T ss_dssp -------------------CEEEE--S---CCCHHHHHHHHHTTCCEEEEEE---------CCCSS---TTSCCCEEEEE
T ss_pred -------------------hhHhc--C---CCCHHHHHHHHhcCCcEEEEcc---------ccccC---CCCccCceeEE
Confidence 01111 1 2356789999999999988765 33322 22223799999
Q ss_pred EEEeecCC
Q psy12185 306 IVGYDNYS 313 (317)
Q Consensus 306 iVGyg~~~ 313 (317)
||||-.-+
T Consensus 134 v~Gya~~~ 141 (183)
T 1pxv_A 134 VVGNAKIN 141 (183)
T ss_dssp EEEEEEET
T ss_pred EEeeeecC
Confidence 99997544
No 47
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4
Probab=95.80 E-value=0.069 Score=48.11 Aligned_cols=109 Identities=15% Similarity=0.149 Sum_probs=73.3
Q ss_pred cCCCCCccHHHHHHHHHHHHHHHH--------HcCCCccCCHHHHhhcCCCCCCCCCCCchHHHHHHHHHhCCCCCCCCC
Q psy12185 154 RNQQTCGACWAFSTVETAESMHAL--------KNGTLSLLSVQEVIDCAGNGNMGCSGGDFCALLDWMDVNKVVLEPESE 225 (317)
Q Consensus 154 ~dQg~CGsCwAfa~~~~le~~~~i--------~~~~~~~lS~q~l~dC~~~~~~gC~GG~~~~a~~y~~~~~~Gi~~e~~ 225 (317)
..||.=+=|-+|+.++.|-+.... -+...+.+|+++|.++ |..+...++|+.. .|.
T Consensus 201 ETQg~~pWCa~Ya~aailN~~~~t~~~nA~~iMr~~yPN~S~~~l~~t---------s~~~~q~Iky~qs--yG~----- 264 (367)
T 1x9y_A 201 EQQFDNSWCAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPNC---------ATFPNQMIEYGKS--QGR----- 264 (367)
T ss_dssp CCCSSSSCHHHHHHHHHHHHHTTCSCCCHHHHHHHHCTTSCTTTGGGC---------CCCHHHHHHHHHH--TTE-----
T ss_pred eccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhhc---------CCCHHHHHHHHHH--hCc-----
Confidence 468999999999999988765421 1113578899999885 4578899999975 442
Q ss_pred CccccCCCcccCCCCCCCceEEeeeEEecCCCcHHHHHHHHHhCCCeEEEEecccccccCCCeEeCCCCCCCCCCCeEEE
Q psy12185 226 YPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSILTDIATHGPVIAAVNALTWQYYLGGVIQYNCDGSLANINHAVQ 305 (317)
Q Consensus 226 yPY~~~~~~C~~~~~~~~~~~i~~~~~~~~~~~~~~i~~al~~~gPv~v~i~~~~f~~Y~~GIy~~~c~~~~~~~~Hav~ 305 (317)
.+.-... ..+-+++++.+-.+-||.|..+. ++.. ......+||++
T Consensus 265 --------------------~~~~~n~---~ls~deVk~~id~Nk~I~v~~~~---------v~~~---~n~~~~gHAla 309 (367)
T 1x9y_A 265 --------------------DIHYQEG---VPSYNQVDQLTKDNVGIMILAQS---------VSQN---PNDPHLGHALA 309 (367)
T ss_dssp --------------------EEEEEES---CCCHHHHHHHHHTTCCEEEEEEE---------TTSC---SSSCCCSEEEE
T ss_pred --------------------chhhhcC---CCCHHHHHHHHhcCCcEEEEccc---------cccC---CCCccCceeEE
Confidence 2222211 23567888999999999998874 1111 11123699999
Q ss_pred EEEeecCC
Q psy12185 306 IVGYDNYS 313 (317)
Q Consensus 306 iVGyg~~~ 313 (317)
||||-..+
T Consensus 310 vvGyA~~~ 317 (367)
T 1x9y_A 310 VVGNAKIN 317 (367)
T ss_dssp EEEEEEET
T ss_pred EEeccccC
Confidence 99996543
No 48
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1
Probab=95.79 E-value=0.092 Score=42.61 Aligned_cols=107 Identities=9% Similarity=0.016 Sum_probs=71.7
Q ss_pred cCCCCCccHHHHHHHHHHHHHHHHH--------cCCCccCCHHHHhhcCCCCCCCCCCCchHHHHHHHHHhCCCCCCCCC
Q psy12185 154 RNQQTCGACWAFSTVETAESMHALK--------NGTLSLLSVQEVIDCAGNGNMGCSGGDFCALLDWMDVNKVVLEPESE 225 (317)
Q Consensus 154 ~dQg~CGsCwAfa~~~~le~~~~i~--------~~~~~~lS~q~l~dC~~~~~~gC~GG~~~~a~~y~~~~~~Gi~~e~~ 225 (317)
..||.=+=|-+|+.++.|-+..... +...+.+|+++|..+. ..+...++|++. .|-.
T Consensus 16 ETQg~~pWCa~Ya~aailN~~~~~~~~~A~~imr~~yPn~S~~~l~~~~---------~t~~e~iky~~s--~g~~---- 80 (174)
T 1cv8_A 16 ETQGNNGWCAGYTMSALLNATYNTNKYHAEAVMRFLHPNLQGQQFQFTG---------LTPREMIYFGQT--QGRS---- 80 (174)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHHTCCCCCHHHHHHHHCSSCCHHHHHHCC---------CCHHHHHHHHHH--TTCC----
T ss_pred eccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCCHHHHhhcC---------CCHHHHHHHHHH--cCCC----
Confidence 3689989999999999887654211 1135789999999654 467889999866 2310
Q ss_pred CccccCCCcccCCCCCCCceEEeeeEEecCCCcHHHHHHHHHhCCCeEEEEecccccccCCCeEeCCCCCCCCCCCeEEE
Q psy12185 226 YPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSILTDIATHGPVIAAVNALTWQYYLGGVIQYNCDGSLANINHAVQ 305 (317)
Q Consensus 226 yPY~~~~~~C~~~~~~~~~~~i~~~~~~~~~~~~~~i~~al~~~gPv~v~i~~~~f~~Y~~GIy~~~c~~~~~~~~Hav~ 305 (317)
..+.. . ..+-+++++.+.++-|+.+..+- | . ..+....+||++
T Consensus 81 -------------------~~~~n--~---~ls~~eV~~~~~~nk~i~i~~~~---------v-e---~~~~~~~gHAla 123 (174)
T 1cv8_A 81 -------------------PQLLN--R---MTTYNEVDNLTKNNKGIAILGSR---------V-E---SRNGMHAGHAMA 123 (174)
T ss_dssp -------------------CEEES--S---CCCHHHHHHHHHTTCCEEEEEEE---------S-S---CBTTBCCEEEEE
T ss_pred -------------------hhhhc--C---CCCHHHHHHHHhcCCceEEEccc---------c-c---CCCCCCCceeEE
Confidence 01111 0 13567889999998899887663 2 0 111123699999
Q ss_pred EEEeecC
Q psy12185 306 IVGYDNY 312 (317)
Q Consensus 306 iVGyg~~ 312 (317)
||||-.-
T Consensus 124 v~Gy~~~ 130 (174)
T 1cv8_A 124 VVGNAKL 130 (174)
T ss_dssp EEEEEEE
T ss_pred EEeeeee
Confidence 9999863
No 49
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis}
Probab=80.20 E-value=2.6 Score=36.14 Aligned_cols=49 Identities=22% Similarity=0.407 Sum_probs=32.8
Q ss_pred cHHHHHHHHHhCCCeEEEEec--c-----ccccc--CCCeEeCCCCCCCCCCCeEEEEEEeecC
Q psy12185 258 SESSILTDIATHGPVIAAVNA--L-----TWQYY--LGGVIQYNCDGSLANINHAVQIVGYDNY 312 (317)
Q Consensus 258 ~~~~i~~al~~~gPv~v~i~~--~-----~f~~Y--~~GIy~~~c~~~~~~~~Hav~iVGyg~~ 312 (317)
+.++|++.|.+.-||.|.... . .|+.+ .+|-.... ..+|+|+|+||+..
T Consensus 131 sl~~L~~~I~~G~PVIv~~t~~~~p~~~~~~~~W~~~~G~~~~~------~~~H~VVl~GYd~~ 188 (236)
T 3erv_A 131 SIEELYKSVKAGQPVVIITNATFAPLDEDEFTTWETNNGDVSIT------YNEHCVVLIGYDQE 188 (236)
T ss_dssp CHHHHHHHHHTTCCEEEEEETTSSCCCGGGCEEEEETTEEEEEC------TTEEEEEEEEECSS
T ss_pred CHHHHHHHHHCCCeEEEEEeCCcccccccccceeecCCCceeec------cCCeEEEEEEEeCC
Confidence 678999999988899998764 1 12211 13432211 15899999999864
Done!