BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12187
(112 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A1ZAI5|FACR1_DROME Putative fatty acyl-CoA reductase CG5065 OS=Drosophila melanogaster
GN=CG5065 PE=3 SV=1
Length = 625
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 24 LVPIYKKLDKALAVLQPFSSRDWYFENGNVQTAWNRLSPADQSRFPFDIRDLDWDDYLET 83
+V + K+ KA+ L+ F++R W F++ NV + LSP D+ F FD+R ++WD Y+E
Sbjct: 492 VVNVQNKIAKAVECLEYFATRQWRFKDDNVHALLHTLSPKDREIFVFDVRHINWDKYVER 551
Query: 84 YVRG--TMVYHLRDSFEPEVRKKALARYF 110
YV G ++ R P RK+ L Y+
Sbjct: 552 YVLGFREFLFKQRPESLPASRKRMLRLYY 580
>sp|Q5ZM72|FACR1_CHICK Fatty acyl-CoA reductase 1 OS=Gallus gallus GN=FAR1 PE=2 SV=1
Length = 515
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 30 KLDKALAVLQPFSSRDWYFENGNVQTAWNRLSPADQSRFPFDIRDLDWDDYLETYVRGTM 89
+L KA+ L+ F+S W + N+ N+LSP D+ F FD+R L W +Y+E Y GT
Sbjct: 383 RLHKAMVFLEYFTSNSWIWNTENMTMLMNQLSPEDKKTFNFDVRQLHWAEYMENYCMGTK 442
Query: 90 VYHLRDSFE--PEVRK 103
Y L + P RK
Sbjct: 443 KYVLNEEMSGLPAARK 458
>sp|Q7ZXF5|FACR1_XENLA Fatty acyl-CoA reductase 1 OS=Xenopus laevis GN=far1 PE=2 SV=1
Length = 515
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 30 KLDKALAVLQPFSSRDWYFENGNVQTAWNRLSPADQSRFPFDIRDLDWDDYLETYVRGTM 89
+L +A+ +L+ F+S W + N N ++LSP D+ F FD+R L W +Y+E Y GT
Sbjct: 383 RLHRAMMLLEYFTSNSWVWNNENTNMLMSQLSPEDKKVFNFDVRQLHWAEYMENYCMGTK 442
Query: 90 VYHLRDSFE--PEVRK 103
Y L + P RK
Sbjct: 443 KYVLNEEMSGLPAARK 458
>sp|Q922J9|FACR1_MOUSE Fatty acyl-CoA reductase 1 OS=Mus musculus GN=Far1 PE=1 SV=1
Length = 515
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 30 KLDKALAVLQPFSSRDWYFENGNVQTAWNRLSPADQSRFPFDIRDLDWDDYLETYVRGTM 89
+L KA+ L+ F+S W + NV N+L+P D+ F D+R L W +Y+E Y GT
Sbjct: 383 RLHKAMVFLEYFTSNSWVWNTDNVNMLMNQLNPEDKKTFNIDVRQLHWAEYIENYCMGTK 442
Query: 90 VYHLRDSFE--PEVRK 103
Y L + P RK
Sbjct: 443 KYVLNEEMSGLPAARK 458
>sp|Q66H50|FACR1_RAT Fatty acyl-CoA reductase 1 OS=Rattus norvegicus GN=Far1 PE=2 SV=1
Length = 515
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 30 KLDKALAVLQPFSSRDWYFENGNVQTAWNRLSPADQSRFPFDIRDLDWDDYLETYVRGTM 89
+L KA+ L+ F+S W + NV N+L+P D+ F D+R L W +Y+E Y GT
Sbjct: 383 RLHKAMVFLEYFTSNSWVWNTDNVNMLMNQLNPEDKKTFNIDVRQLHWAEYIENYCMGTK 442
Query: 90 VYHLRDSFE--PEVRK 103
Y L + P RK
Sbjct: 443 KYVLNEEMSGLPAARK 458
>sp|Q5R834|FACR1_PONAB Fatty acyl-CoA reductase 1 OS=Pongo abelii GN=FAR1 PE=2 SV=1
Length = 515
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 30 KLDKALAVLQPFSSRDWYFENGNVQTAWNRLSPADQSRFPFDIRDLDWDDYLETYVRGTM 89
+L KA+ L+ F+S W + NV N+L+P D+ F D+R L W +Y+E Y GT
Sbjct: 383 RLHKAMVFLEYFTSNSWVWNTDNVNMLMNQLNPEDKKTFNIDVRQLHWAEYIENYCLGTK 442
Query: 90 VYHLRDSFE--PEVRK 103
Y L + P RK
Sbjct: 443 KYVLNEEMSGLPAARK 458
>sp|Q8WVX9|FACR1_HUMAN Fatty acyl-CoA reductase 1 OS=Homo sapiens GN=FAR1 PE=1 SV=1
Length = 515
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 30 KLDKALAVLQPFSSRDWYFENGNVQTAWNRLSPADQSRFPFDIRDLDWDDYLETYVRGTM 89
+L KA+ L+ F+S W + NV N+L+P D+ F D+R L W +Y+E Y GT
Sbjct: 383 RLHKAMVFLEYFTSNSWVWNTENVNMLMNQLNPEDKKTFNIDVRQLHWAEYIENYCLGTK 442
Query: 90 VYHLRDSFE--PEVRK 103
Y L + P RK
Sbjct: 443 KYVLNEEMSGLPAARK 458
>sp|Q7TNT2|FACR2_MOUSE Fatty acyl-CoA reductase 2 OS=Mus musculus GN=Far2 PE=2 SV=1
Length = 515
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%)
Query: 24 LVPIYKKLDKALAVLQPFSSRDWYFENGNVQTAWNRLSPADQSRFPFDIRDLDWDDYLET 83
++ + +L K +++L+ F + W + N + + LSP DQ F FD+R L+W +Y+E
Sbjct: 377 MLKLMNRLLKTISMLEYFINHSWEWSTNNTEMLLSELSPEDQRVFNFDVRQLNWLEYIEN 436
Query: 84 YVRGTMVYHLRDSFEPEVRKKALARYFRS 112
YV G Y L++ + K R R+
Sbjct: 437 YVLGVKKYLLKEDLAGIPKAKQHLRRLRN 465
>sp|Q0P5J1|FACR2_BOVIN Fatty acyl-CoA reductase 2 OS=Bos taurus GN=FAR2 PE=2 SV=1
Length = 515
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 24 LVPIYKKLDKALAVLQPFSSRDWYFENGNVQTAWNRLSPADQSRFPFDIRDLDWDDYLET 83
+ + +L + L++L+ F +R W + N + + LSP DQ F FD+R L+W +Y+E
Sbjct: 377 MTKLMNRLLRTLSMLEYFVNRSWEWSTYNTEMLMSELSPEDQRVFNFDVRQLNWLEYIEN 436
Query: 84 YVRGTMVYHLRDSFE--PEVRK 103
YV G Y L++ PE ++
Sbjct: 437 YVLGVKKYLLKEDMAGIPEAKQ 458
>sp|Q96K12|FACR2_HUMAN Fatty acyl-CoA reductase 2 OS=Homo sapiens GN=FAR2 PE=2 SV=1
Length = 515
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%)
Query: 24 LVPIYKKLDKALAVLQPFSSRDWYFENGNVQTAWNRLSPADQSRFPFDIRDLDWDDYLET 83
+ + +L + +++L+ F +R W + N + + LSP DQ F FD+R L+W +Y+E
Sbjct: 377 MTKLMNRLLRTVSMLEYFINRSWEWSTYNTEMLMSELSPEDQRVFNFDVRQLNWLEYIEN 436
Query: 84 YVRGTMVYHLRD 95
YV G Y L++
Sbjct: 437 YVLGVKKYLLKE 448
>sp|Q960W6|FACR3_DROME Putative fatty acyl-CoA reductase CG8306 OS=Drosophila melanogaster
GN=CG8306 PE=2 SV=1
Length = 516
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%)
Query: 23 VLVPIYKKLDKALAVLQPFSSRDWYFENGNVQTAWNRLSPADQSRFPFDIRDLDWDDYLE 82
+LV ++K + +L L+ F +W+F++ + L+ D+ +F DI +L WD+Y
Sbjct: 385 ILVRLHKNVWNSLNTLEKFIFTEWHFDSKRLLALSKTLNIVDKKKFFIDIGELAWDEYFS 444
Query: 83 TYVRGTMVY 91
+ G Y
Sbjct: 445 NTILGVRQY 453
>sp|Q08891|FACR2_ARATH Fatty acyl-CoA reductase 2 OS=Arabidopsis thaliana GN=FAR2 PE=2
SV=2
Length = 616
Score = 34.3 bits (77), Expect = 0.22, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 37 VLQPFSSRDWYFENGNVQTAWNRLSPADQSRFPFDIRDLDWDDYL 81
+ +P++ F+N N Q +S ++ F FD+ ++W DY+
Sbjct: 555 IYEPYTFYGGRFDNSNTQRLMENMSEDEKREFGFDVGSINWTDYI 599
>sp|B9TSP7|FACR6_ARATH Fatty acyl-CoA reductase 6, chloroplastic OS=Arabidopsis thaliana
GN=FAR6 PE=2 SV=1
Length = 548
Score = 33.1 bits (74), Expect = 0.50, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 39 QPFSSRDWYFENGNVQTAWNRLSPADQSRFPFDIRDLDWDDYL 81
+P++ F+N N + +S ++ F FDI+ +DW+ Y+
Sbjct: 487 EPYTFFQARFDNTNTTSLIQEMSMEEKKTFGFDIKGIDWEHYI 529
>sp|Q93ZB9|FACR3_ARATH Fatty acyl-CoA reductase 3 OS=Arabidopsis thaliana GN=FAR3 PE=2
SV=1
Length = 493
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 39 QPFSSRDWYFENGNVQTAWNRLSPA--DQSRFPFDIRDLDWDDY-LETYVRGTMVY 91
QP+ F++ N + +S + F FD + LDWDDY L T+V G + Y
Sbjct: 436 QPYLFFYGIFDDSNTEKLRKMVSKTGVENEMFYFDPKVLDWDDYFLNTHVIGLLKY 491
>sp|Q6NTP2|IREB2_XENLA Iron-responsive element-binding protein 2 OS=Xenopus laevis
GN=ireb2 PE=2 SV=1
Length = 955
Score = 29.6 bits (65), Expect = 5.9, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 8/48 (16%)
Query: 55 TAWNRLSPADQSRFPFDIRDLDWDDYLETYVRGTMVYHLRDSFEPEVR 102
T WN L + + FP+D+R TY+R +H + P ++
Sbjct: 688 TRWNLLDAPESTLFPWDLR--------STYIRSPPFFHKLEKIPPPIQ 727
>sp|A0JMA0|IREB2_XENTR Iron-responsive element-binding protein 2 OS=Xenopus tropicalis
GN=ireb2 PE=2 SV=1
Length = 957
Score = 29.3 bits (64), Expect = 7.8, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 10/73 (13%)
Query: 30 KLDKALAVLQPFSSRDWYFENGNVQTAWNRLSPADQSRFPFDIRDLDWDDYLETYVRGTM 89
++++ + + FS E N T WN L + + FP+D+R T++R
Sbjct: 667 EVEETMVIPSMFSELKLKIEKQN--TRWNLLDAPESTLFPWDLR--------STFIRSPP 716
Query: 90 VYHLRDSFEPEVR 102
+H + P ++
Sbjct: 717 FFHKLEKIPPPIQ 729
>sp|Q9LXN3|FACR4_ARATH Probable fatty acyl-CoA reductase 4 OS=Arabidopsis thaliana GN=FAR4
PE=2 SV=1
Length = 493
Score = 29.3 bits (64), Expect = 7.9, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 68 FPFDIRDLDWDDYLET-YVRGTMVYHLR 94
F FD + +DW+DY+ T ++ G + Y L+
Sbjct: 465 FEFDPKSIDWEDYMTTIHIPGLITYVLK 492
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,856,448
Number of Sequences: 539616
Number of extensions: 1633795
Number of successful extensions: 3900
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 3887
Number of HSP's gapped (non-prelim): 18
length of query: 112
length of database: 191,569,459
effective HSP length: 80
effective length of query: 32
effective length of database: 148,400,179
effective search space: 4748805728
effective search space used: 4748805728
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)