Query psy12187
Match_columns 112
No_of_seqs 104 out of 566
Neff 6.6
Searched_HMMs 13730
Date Fri Aug 16 20:55:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12187.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/12187hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1lr7a1 g.3.11.3 (A:64-88) Dom 63.3 1.1 7.7E-05 20.7 0.6 7 2-8 6-12 (26)
2 d1pjza_ c.66.1.36 (A:) Thiopur 35.2 3.7 0.00027 25.4 -0.1 30 1-30 24-60 (201)
3 d1im8a_ c.66.1.14 (A:) Hypothe 28.6 10 0.00073 24.5 1.3 30 1-30 43-83 (225)
4 d1nkva_ c.66.1.21 (A:) Hypothe 28.2 5.2 0.00038 26.4 -0.3 23 76-98 188-210 (245)
5 d1vlma_ c.66.1.41 (A:) Possibl 25.8 6 0.00044 25.2 -0.3 9 1-9 40-48 (208)
6 d1tw3a2 c.66.1.12 (A:99-351) C 25.6 6.1 0.00045 26.4 -0.3 12 1-12 84-95 (253)
7 d2i6ga1 c.66.1.44 (A:1-198) Pu 24.9 6.4 0.00047 25.1 -0.3 9 1-9 34-42 (198)
8 d1ve3a1 c.66.1.43 (A:2-227) Hy 24.3 12 0.00086 23.6 1.0 16 1-16 41-56 (226)
9 d2o57a1 c.66.1.18 (A:16-297) P 24.1 6.8 0.0005 26.4 -0.3 30 1-30 71-108 (282)
10 d1rutx1 g.39.1.3 (X:19-48) LIM 23.1 8.4 0.00061 18.3 0.0 10 4-13 6-15 (30)
11 d2ex4a1 c.66.1.42 (A:2-224) Ad 23.0 7.4 0.00054 25.2 -0.3 13 1-13 64-76 (222)
12 d1xtpa_ c.66.1.42 (A:) Hypothe 22.9 7.4 0.00054 26.2 -0.3 12 1-12 97-108 (254)
13 d1ri5a_ c.66.1.34 (A:) mRNA ca 22.5 7.9 0.00058 25.7 -0.2 10 1-10 28-37 (252)
14 d2a14a1 c.66.1.15 (A:5-261) In 22.3 8.7 0.00063 25.0 -0.0 15 1-15 55-69 (257)
15 d1n4ka1 a.118.22.1 (A:436-602) 22.3 72 0.0052 20.4 4.8 73 3-98 61-134 (167)
16 d1qzza2 c.66.1.12 (A:102-357) 22.1 7.9 0.00057 26.1 -0.3 10 1-10 85-94 (256)
No 1
>d1lr7a1 g.3.11.3 (A:64-88) Domain of follistatin {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=63.33 E-value=1.1 Score=20.69 Aligned_cols=7 Identities=71% Similarity=1.706 Sum_probs=5.7
Q ss_pred cccCCCc
Q psy12187 2 VDCGSGR 8 (112)
Q Consensus 2 ~~~~~~~ 8 (112)
||||.|.
T Consensus 6 vdcgpgk 12 (26)
T d1lr7a1 6 VDCGPGK 12 (26)
T ss_dssp CCCCTTE
T ss_pred cccCCCc
Confidence 7999874
No 2
>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}
Probab=35.22 E-value=3.7 Score=25.44 Aligned_cols=30 Identities=10% Similarity=0.013 Sum_probs=15.1
Q ss_pred CcccCCCcccHHHHHHhhCc-------CchHHHHHHH
Q psy12187 1 MVDCGSGRANETWLETTSTI-------TLVLVPIYKK 30 (112)
Q Consensus 1 ~~~~~~~~~~~~~l~~~~g~-------Kp~l~k~~rk 30 (112)
++|+|||.-....-+--.|. .+.++...++
T Consensus 24 vLd~GCG~G~~a~~la~~G~~V~gvD~S~~~i~~a~~ 60 (201)
T d1pjza_ 24 VLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFT 60 (201)
T ss_dssp EEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHH
T ss_pred EEEecCcCCHHHHHHHHcCCceEeecccHHHHHHHHH
Confidence 46777776543332222343 4555555544
No 3
>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}
Probab=28.55 E-value=10 Score=24.54 Aligned_cols=30 Identities=17% Similarity=0.182 Sum_probs=19.4
Q ss_pred CcccCCCcccHHHHHH-h----------hCcCchHHHHHHH
Q psy12187 1 MVDCGSGRANETWLET-T----------STITLVLVPIYKK 30 (112)
Q Consensus 1 ~~~~~~~~~~~~~l~~-~----------~g~Kp~l~k~~rk 30 (112)
++|+|||.-..+..+. . .--.|.|++..++
T Consensus 43 vLDlGCGtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~ 83 (225)
T d1im8a_ 43 VYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQ 83 (225)
T ss_dssp EEEESCTTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHH
T ss_pred EEEeccchhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHH
Confidence 5799999988776443 2 2234677776654
No 4
>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}
Probab=28.18 E-value=5.2 Score=26.44 Aligned_cols=23 Identities=13% Similarity=0.170 Sum_probs=15.4
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCc
Q psy12187 76 DWDDYLETYVRGTMVYHLRDSFE 98 (112)
Q Consensus 76 dW~~Y~~~~i~GirkyllKE~~~ 98 (112)
.|+.|........+.++...+..
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~ 210 (245)
T d1nkva_ 188 GWDRYEAAKWLTMRRWLEANPDD 210 (245)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTS
T ss_pred HHHHHHHHHHHHHHHHHHhCCCC
Confidence 37777777777777776655443
No 5
>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]}
Probab=25.78 E-value=6 Score=25.15 Aligned_cols=9 Identities=33% Similarity=0.519 Sum_probs=6.6
Q ss_pred CcccCCCcc
Q psy12187 1 MVDCGSGRA 9 (112)
Q Consensus 1 ~~~~~~~~~ 9 (112)
++|+|||.-
T Consensus 40 vLDiGcG~G 48 (208)
T d1vlma_ 40 GVEIGVGTG 48 (208)
T ss_dssp EEEETCTTS
T ss_pred EEEECCCCc
Confidence 478888864
No 6
>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}
Probab=25.63 E-value=6.1 Score=26.43 Aligned_cols=12 Identities=25% Similarity=0.612 Sum_probs=8.5
Q ss_pred CcccCCCcccHH
Q psy12187 1 MVDCGSGRANET 12 (112)
Q Consensus 1 ~~~~~~~~~~~~ 12 (112)
|+|+|||--...
T Consensus 84 VLDvGcG~G~~~ 95 (253)
T d1tw3a2 84 VLDVGGGKGGFA 95 (253)
T ss_dssp EEEETCTTSHHH
T ss_pred EEEeCCCCCHHH
Confidence 579999876443
No 7
>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}
Probab=24.86 E-value=6.4 Score=25.08 Aligned_cols=9 Identities=33% Similarity=0.685 Sum_probs=6.0
Q ss_pred CcccCCCcc
Q psy12187 1 MVDCGSGRA 9 (112)
Q Consensus 1 ~~~~~~~~~ 9 (112)
++|+|||-=
T Consensus 34 vLDiGcG~G 42 (198)
T d2i6ga1 34 TLDLGCGNG 42 (198)
T ss_dssp EEEETCTTS
T ss_pred EEEECCCCC
Confidence 468888743
No 8
>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=24.30 E-value=12 Score=23.57 Aligned_cols=16 Identities=19% Similarity=0.314 Sum_probs=11.8
Q ss_pred CcccCCCcccHHHHHH
Q psy12187 1 MVDCGSGRANETWLET 16 (112)
Q Consensus 1 ~~~~~~~~~~~~~l~~ 16 (112)
|+|+|||--.....+.
T Consensus 41 ILDiGcG~G~~~~~la 56 (226)
T d1ve3a1 41 VLDLACGVGGFSFLLE 56 (226)
T ss_dssp EEEETCTTSHHHHHHH
T ss_pred EEEECCCcchhhhhHh
Confidence 5799999887765553
No 9
>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}
Probab=24.08 E-value=6.8 Score=26.42 Aligned_cols=30 Identities=13% Similarity=0.092 Sum_probs=17.2
Q ss_pred CcccCCCcccHHHHH-HhhCc-------CchHHHHHHH
Q psy12187 1 MVDCGSGRANETWLE-TTSTI-------TLVLVPIYKK 30 (112)
Q Consensus 1 ~~~~~~~~~~~~~l~-~~~g~-------Kp~l~k~~rk 30 (112)
++|+|||--.....+ .-.|. .|.++...++
T Consensus 71 vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~i~~a~~ 108 (282)
T d2o57a1 71 GLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEE 108 (282)
T ss_dssp EEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHH
T ss_pred EEEeCCCCcHHHhhhhccCCcEEEEEeccchhhhhhhc
Confidence 478888877655333 33454 4555554444
No 10
>d1rutx1 g.39.1.3 (X:19-48) LIM only 4 (Lmo4) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.10 E-value=8.4 Score=18.34 Aligned_cols=10 Identities=20% Similarity=0.269 Sum_probs=7.8
Q ss_pred cCCCcccHHH
Q psy12187 4 CGSGRANETW 13 (112)
Q Consensus 4 ~~~~~~~~~~ 13 (112)
.|||+|..|.
T Consensus 6 aGC~~~I~DR 15 (30)
T d1rutx1 6 AGCGGKIADR 15 (30)
T ss_dssp TTTCCBCCCS
T ss_pred CCCCCccchh
Confidence 5899998763
No 11
>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.98 E-value=7.4 Score=25.25 Aligned_cols=13 Identities=38% Similarity=0.675 Sum_probs=9.9
Q ss_pred CcccCCCcccHHH
Q psy12187 1 MVDCGSGRANETW 13 (112)
Q Consensus 1 ~~~~~~~~~~~~~ 13 (112)
++|+|||--....
T Consensus 64 vLDiGcG~G~~~~ 76 (222)
T d2ex4a1 64 ALDCGAGIGRITK 76 (222)
T ss_dssp EEEETCTTTHHHH
T ss_pred EEEeccCCCHhhH
Confidence 4799999887654
No 12
>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}
Probab=22.95 E-value=7.4 Score=26.24 Aligned_cols=12 Identities=42% Similarity=0.828 Sum_probs=8.2
Q ss_pred CcccCCCcccHH
Q psy12187 1 MVDCGSGRANET 12 (112)
Q Consensus 1 ~~~~~~~~~~~~ 12 (112)
++|||||--..+
T Consensus 97 vLD~GcG~G~~t 108 (254)
T d1xtpa_ 97 ALDCGAGIGRIT 108 (254)
T ss_dssp EEEETCTTTHHH
T ss_pred EEEecccCChhh
Confidence 468888776554
No 13
>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}
Probab=22.50 E-value=7.9 Score=25.65 Aligned_cols=10 Identities=30% Similarity=0.783 Sum_probs=7.1
Q ss_pred CcccCCCccc
Q psy12187 1 MVDCGSGRAN 10 (112)
Q Consensus 1 ~~~~~~~~~~ 10 (112)
++|+|||.-.
T Consensus 28 VLDlGCG~G~ 37 (252)
T d1ri5a_ 28 VLDLGCGKGG 37 (252)
T ss_dssp EEEETCTTTT
T ss_pred EEEecccCcH
Confidence 4788888763
No 14
>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.26 E-value=8.7 Score=25.03 Aligned_cols=15 Identities=33% Similarity=0.457 Sum_probs=9.8
Q ss_pred CcccCCCcccHHHHH
Q psy12187 1 MVDCGSGRANETWLE 15 (112)
Q Consensus 1 ~~~~~~~~~~~~~l~ 15 (112)
++|+|||.=....++
T Consensus 55 vLDlGcG~G~~~~~~ 69 (257)
T d2a14a1 55 LIDIGSGPTIYQVLA 69 (257)
T ss_dssp EEESSCTTCCGGGTT
T ss_pred EEEECCCCCHhHHHH
Confidence 479999976554443
No 15
>d1n4ka1 a.118.22.1 (A:436-602) IP3 receptor type 1 binding core, domain 2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.25 E-value=72 Score=20.36 Aligned_cols=73 Identities=12% Similarity=0.042 Sum_probs=37.6
Q ss_pred ccCCCcccHHHHHHhhCcCchHHHHHHHHHHHHhhcc-ccccceeEeecccHHHHHhhCCcCCCCceeccCCCCCHHHHH
Q psy12187 3 DCGSGRANETWLETTSTITLVLVPIYKKLDKALAVLQ-PFSSRDWYFENGNVQTAWNRLSPADQSRFPFDIRDLDWDDYL 81 (112)
Q Consensus 3 ~~~~~~~~~~~l~~~~g~Kp~l~k~~rki~~~~~~l~-~Ft~~eW~F~n~n~~~L~~~ls~~Dr~~F~fD~~~IdW~~Y~ 81 (112)
+.+.+.|+-+ +++++|-+.-+..+..+++ ||+-+ +...+.++.+.+.+.+ -+-.++
T Consensus 61 ~~~~~~pn~~--------rQkLLReq~ii~~l~~iL~~pf~~~----~~~~~~~l~e~~d~~~-----------~~~~~i 117 (167)
T d1n4ka1 61 EVVFSKPNRE--------RQKLMREQNILKQIFKLLQAPFTDC----GDGPMLRLEELGDQRH-----------APFRHI 117 (167)
T ss_dssp GGGGCCCCHH--------HHHHHHHTTHHHHHHHHHHGGGC---------------------C-----------HHHHHH
T ss_pred hhhhcCCcHH--------HHHHHHHhCHHHHHHHHHhhhhhcc----ccchHhhHHHHHHhhh-----------HHHHHH
Confidence 4455666653 4566666666666666666 67553 3444444444333322 345677
Q ss_pred HHHHHHHHHHHhCCCCc
Q psy12187 82 ETYVRGTMVYHLRDSFE 98 (112)
Q Consensus 82 ~~~i~GirkyllKE~~~ 98 (112)
...|+-+-+++.+++.+
T Consensus 118 ~rlcy~~L~~~c~~n~~ 134 (167)
T d1n4ka1 118 CRLCYRVLRHSQQDYRK 134 (167)
T ss_dssp HHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHcCHH
Confidence 77888888888888876
No 16
>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}
Probab=22.11 E-value=7.9 Score=26.12 Aligned_cols=10 Identities=30% Similarity=0.763 Sum_probs=7.5
Q ss_pred CcccCCCccc
Q psy12187 1 MVDCGSGRAN 10 (112)
Q Consensus 1 ~~~~~~~~~~ 10 (112)
+||+|||.-.
T Consensus 85 vlDvG~G~G~ 94 (256)
T d1qzza2 85 VLDVGGGNGG 94 (256)
T ss_dssp EEEETCTTSH
T ss_pred EEEECCCCCH
Confidence 5799998763
Done!