Your job contains 1 sequence.
>psy12190
YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL
TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12190
(105 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F1P0X4 - symbol:SMARCAL1 "Uncharacterized prote... 355 1.2e-31 1
UNIPROTKB|Q498E7 - symbol:smarcal1 "SWI/SNF-related matri... 350 8.7e-31 1
UNIPROTKB|H7BYI2 - symbol:SMARCAL1 "SWI/SNF-related matri... 345 2.0e-30 1
UNIPROTKB|Q0P4U8 - symbol:smarcal1 "SWI/SNF-related matri... 346 2.3e-30 1
UNIPROTKB|Q9NZC9 - symbol:SMARCAL1 "SWI/SNF-related matri... 345 3.0e-30 1
UNIPROTKB|E2RGL2 - symbol:SMARCAL1 "Uncharacterized prote... 344 3.9e-30 1
WB|WBGene00015806 - symbol:C16A3.1 species:6239 "Caenorha... 334 2.1e-29 1
UNIPROTKB|Q8MNV7 - symbol:C16A3.1 "Putative SMARCAL1-like... 334 2.1e-29 1
RGD|1306134 - symbol:Smarcal1 "Swi/SNF related matrix ass... 334 4.1e-29 1
ZFIN|ZDB-GENE-041210-303 - symbol:smarcal1 "SWI/SNF relat... 329 1.1e-28 1
MGI|MGI:1859183 - symbol:Smarcal1 "SWI/SNF related matrix... 326 2.9e-28 1
UNIPROTKB|F1MDP3 - symbol:SMARCAL1 "SWI/SNF-related matri... 306 4.4e-26 1
UNIPROTKB|Q9TTA5 - symbol:SMARCAL1 "SWI/SNF-related matri... 306 4.4e-26 1
DICTYBASE|DDB_G0274965 - symbol:DDB_G0274965 "CHR group p... 302 2.2e-25 1
RGD|1564952 - symbol:Zranb3 "zinc finger, RAN-binding dom... 289 3.8e-25 1
TAIR|locus:2007775 - symbol:CHR18 "chromatin remodeling f... 292 7.0e-25 1
DICTYBASE|DDB_G0281559 - symbol:DDB_G0281559 "CHR group p... 293 1.2e-24 1
FB|FBgn0031655 - symbol:Marcal1 "Marcal1" species:7227 "D... 290 1.5e-24 1
ZFIN|ZDB-GENE-060712-1 - symbol:zranb3 "zinc finger, RAN-... 283 3.6e-24 1
UNIPROTKB|E2RK04 - symbol:ZRANB3 "Uncharacterized protein... 286 7.4e-24 1
MGI|MGI:1918362 - symbol:Zranb3 "zinc finger, RAN-binding... 286 7.4e-24 1
UNIPROTKB|F5GYN7 - symbol:ZRANB3 "Endonuclease ZRANB3" sp... 286 7.5e-24 1
UNIPROTKB|Q5FWF4 - symbol:ZRANB3 "DNA annealing helicase ... 286 7.5e-24 1
UNIPROTKB|K7DXW5 - symbol:Bt.28179 "Uncharacterized prote... 285 8.6e-24 1
UNIPROTKB|F1S0D5 - symbol:ZRANB3 "Uncharacterized protein... 285 8.8e-24 1
UNIPROTKB|E1BB03 - symbol:ZRANB3 "DNA annealing helicase ... 285 9.6e-24 1
UNIPROTKB|E1BSZ4 - symbol:ZRANB3 "Uncharacterized protein... 282 2.0e-23 1
UNIPROTKB|E1BSZ6 - symbol:ZRANB3 "Uncharacterized protein... 282 2.0e-23 1
GENEDB_PFALCIPARUM|PF13_0308 - symbol:PF13_0308 "DNA heli... 260 3.4e-21 1
UNIPROTKB|Q8IDD0 - symbol:PF13_0308 "DNA helicase, putati... 260 3.4e-21 1
DICTYBASE|DDB_G0267556 - symbol:DDB_G0267556 "CHR group p... 199 1.6e-14 1
POMBASE|SPCC1235.05c - symbol:fft2 "fun thirty related pr... 196 3.8e-14 1
POMBASE|SPAC20G8.08c - symbol:fft1 "fun thirty related pr... 189 1.4e-13 1
TAIR|locus:2142753 - symbol:AT5G07810 species:3702 "Arabi... 186 4.0e-13 1
GENEDB_PFALCIPARUM|PF08_0048 - symbol:PF08_0048 "ATP-depe... 188 4.8e-13 1
UNIPROTKB|C0H4W3 - symbol:PF08_0048 "Probable ATP-depende... 188 4.8e-13 1
TAIR|locus:2051678 - symbol:ETL1 species:3702 "Arabidopsi... 182 5.9e-13 1
SGD|S000005717 - symbol:ULS1 "Protein involved in proteol... 185 7.5e-13 1
DICTYBASE|DDB_G0292358 - symbol:ino80 "CHR group protein"... 186 8.1e-13 1
ASPGD|ASPL0000047400 - symbol:AN2285 species:162425 "Emer... 183 1.2e-12 1
POMBASE|SPAC25A8.01c - symbol:fft3 "fun thirty related pr... 180 1.3e-12 1
UNIPROTKB|I3LB74 - symbol:I3LB74 "Uncharacterized protein... 167 1.5e-12 1
ASPGD|ASPL0000018137 - symbol:AN4187 species:162425 "Emer... 183 1.5e-12 1
POMBASE|SPAC11E3.01c - symbol:swr1 "SNF2 family helicase ... 181 1.5e-12 1
POMBASE|SPAC29B12.01 - symbol:ino80 "SNF2 family helicase... 181 2.0e-12 1
ASPGD|ASPL0000037473 - symbol:AN2973 species:162425 "Emer... 179 2.1e-12 1
RGD|1310969 - symbol:Ino80 "INO80 homolog (S. cerevisiae)... 180 2.4e-12 1
UNIPROTKB|Q9ULG1 - symbol:INO80 "DNA helicase INO80" spec... 180 2.4e-12 1
MGI|MGI:1915392 - symbol:Ino80 "INO80 homolog (S. cerevis... 180 2.5e-12 1
UNIPROTKB|F1PKX5 - symbol:INO80 "Uncharacterized protein"... 180 2.5e-12 1
UNIPROTKB|F1NYY9 - symbol:INO80 "Uncharacterized protein"... 180 2.5e-12 1
UNIPROTKB|E1BAN8 - symbol:INO80 "Uncharacterized protein"... 180 2.5e-12 1
UNIPROTKB|F1SSV0 - symbol:INO80 "Uncharacterized protein"... 180 2.5e-12 1
UNIPROTKB|B4E0W6 - symbol:BTAF1 "TATA-binding protein-ass... 174 3.6e-12 1
ASPGD|ASPL0000030172 - symbol:AN5483 species:162425 "Emer... 177 3.7e-12 1
ZFIN|ZDB-GENE-041014-72 - symbol:ino80 "INO80 homolog (S.... 178 4.1e-12 1
WB|WBGene00007027 - symbol:ssl-1 species:6239 "Caenorhabd... 179 5.1e-12 1
DICTYBASE|DDB_G0286219 - symbol:DDB_G0286219 "putative TB... 178 5.4e-12 1
CGD|CAL0002614 - symbol:orf19.4502 species:5476 "Candida ... 177 6.5e-12 1
DICTYBASE|DDB_G0293012 - symbol:DDB_G0293012 "CHR group p... 179 6.7e-12 1
UNIPROTKB|F1NHJ5 - symbol:BTAF1 "Uncharacterized protein"... 176 7.9e-12 1
CGD|CAL0000831 - symbol:orf19.1734 species:5476 "Candida ... 174 9.3e-12 1
UNIPROTKB|J9P9W7 - symbol:SRCAP "Uncharacterized protein"... 174 9.9e-12 1
ASPGD|ASPL0000061821 - symbol:AN10043 species:162425 "Eme... 169 1.1e-11 1
UNIPROTKB|I3LD21 - symbol:I3LD21 "Uncharacterized protein... 174 1.3e-11 1
RGD|1564130 - symbol:Btaf1 "BTAF1 RNA polymerase II, B-TF... 174 1.3e-11 1
UNIPROTKB|O14981 - symbol:BTAF1 "TATA-binding protein-ass... 174 1.3e-11 1
UNIPROTKB|F1SCA0 - symbol:BTAF1 "Uncharacterized protein"... 174 1.3e-11 1
UNIPROTKB|I3LTQ1 - symbol:I3LTQ1 "Uncharacterized protein... 174 1.3e-11 1
UNIPROTKB|E2QWL4 - symbol:BTAF1 "Uncharacterized protein"... 174 1.3e-11 1
POMBASE|SPBC23E6.02 - symbol:rrp2 "ATP-dependent DNA heli... 171 1.4e-11 1
CGD|CAL0000717 - symbol:orf19.5675 species:5476 "Candida ... 171 1.5e-11 1
SGD|S000001388 - symbol:STH1 "ATPase component of the RSC... 172 1.5e-11 1
SGD|S000003118 - symbol:INO80 "ATPase and nucleosome spac... 172 1.6e-11 1
SGD|S000006003 - symbol:MOT1 "Essential protein involved ... 173 1.7e-11 1
UNIPROTKB|F1N507 - symbol:Bt.112326 "Uncharacterized prot... 172 2.1e-11 1
SGD|S000001934 - symbol:IRC5 "Putative ATPase containing ... 168 2.2e-11 1
FB|FBgn0086613 - symbol:Ino80 "Ino80" species:7227 "Droso... 171 2.4e-11 1
RGD|1565642 - symbol:Srcap "Snf2-related CREBBP activator... 174 2.4e-11 1
TAIR|locus:2087780 - symbol:PIE1 "PHOTOPERIOD-INDEPENDENT... 172 2.4e-11 1
TIGR_CMR|BA_5487 - symbol:BA_5487 "helicase, putative" sp... 168 2.4e-11 1
UNIPROTKB|Q6ZRS2 - symbol:SRCAP "Helicase SRCAP" species:... 174 2.4e-11 1
UNIPROTKB|F1RG74 - symbol:SRCAP "Uncharacterized protein"... 174 2.4e-11 1
UNIPROTKB|E1BC33 - symbol:LOC788113 "Uncharacterized prot... 174 2.4e-11 1
UNIPROTKB|B5MDZ7 - symbol:CHD1L "Chromodomain-helicase-DN... 165 2.8e-11 1
UNIPROTKB|F1Q2U2 - symbol:CHD1L "Uncharacterized protein"... 167 3.0e-11 1
SGD|S000000017 - symbol:FUN30 "Snf2p family member with A... 168 3.1e-11 1
ZFIN|ZDB-GENE-021025-1 - symbol:btaf1 "BTAF1 RNA polymera... 170 3.5e-11 1
FB|FBgn0022787 - symbol:Hel89B "Helicase 89B" species:722... 170 3.6e-11 1
ASPGD|ASPL0000041040 - symbol:AN9077 species:162425 "Emer... 169 4.0e-11 1
UNIPROTKB|I3L7V5 - symbol:TTF2 "Uncharacterized protein" ... 167 4.1e-11 1
UNIPROTKB|F1SAY2 - symbol:TTF2 "Uncharacterized protein" ... 167 4.2e-11 1
UNIPROTKB|Q86WJ1 - symbol:CHD1L "Chromodomain-helicase-DN... 165 4.9e-11 1
GENEDB_PFALCIPARUM|PF11_0053 - symbol:PF11_0053 "PfSNF2L"... 167 5.3e-11 1
UNIPROTKB|Q8IIW0 - symbol:PF11_0053 "PfSNF2L" species:363... 167 5.3e-11 1
ASPGD|ASPL0000056677 - symbol:AN1024 species:162425 "Emer... 164 6.0e-11 1
CGD|CAL0003962 - symbol:orf19.239 species:5476 "Candida a... 166 6.1e-11 1
UNIPROTKB|Q9UNY4 - symbol:TTF2 "Transcription termination... 165 6.8e-11 1
UNIPROTKB|F1N2E8 - symbol:TTF2 "Uncharacterized protein" ... 165 6.8e-11 1
MGI|MGI:95453 - symbol:Smarcad1 "SWI/SNF-related, matrix-... 164 7.4e-11 1
WARNING: Descriptions of 421 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|F1P0X4 [details] [associations]
symbol:SMARCAL1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0036310 "annealing helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR010003
Pfam:PF00176 Pfam:PF00271 Pfam:PF07443 PROSITE:PS51194
PROSITE:PS51467 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006357 GO:GO:0016568 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0008094
GeneTree:ENSGT00630000089754 OMA:FKQQNLS EMBL:AADN02016814
IPI:IPI00581881 Ensembl:ENSGALT00000018709 Uniprot:F1P0X4
Length = 704
Score = 355 (130.0 bits), Expect = 1.2e-31, P = 1.2e-31
Identities = 67/101 (66%), Positives = 83/101 (82%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
YIRIDGS S ER+S+ +FQ+ +K VAVLS+TAAN G+TL+AA+LVVFAELFWNPG+L
Sbjct: 514 YIRIDGSTSSAERQSLCQKFQFSEKQAVAVLSLTAANMGLTLSAADLVVFAELFWNPGVL 573
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
QAEDRAHRIGQ SV + YLVA+ TADD+LWP++ K+ V
Sbjct: 574 IQAEDRAHRIGQTSSVNVHYLVARGTADDFLWPMIQEKIKV 614
>UNIPROTKB|Q498E7 [details] [associations]
symbol:smarcal1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A-like protein 1"
species:8355 "Xenopus laevis" [GO:0000733 "DNA strand renaturation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006259 "DNA
metabolic process" evidence=ISS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0036310 "annealing helicase activity" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR010003
Pfam:PF00176 Pfam:PF00271 Pfam:PF07443 PROSITE:PS51194
PROSITE:PS51467 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006357 GO:GO:0016568 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0036310
GO:GO:0008094 CTD:50485 HOVERGEN:HBG054110 KO:K14440 EMBL:BC100245
RefSeq:NP_001089668.1 UniGene:Xl.6594 ProteinModelPortal:Q498E7
GeneID:734728 KEGG:xla:734728 Xenbase:XB-GENE-866253 Uniprot:Q498E7
Length = 960
Score = 350 (128.3 bits), Expect = 8.7e-31, P = 8.7e-31
Identities = 67/101 (66%), Positives = 82/101 (81%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
YIRIDG+ S +R+S+ +FQ+ +K VAVLSITAAN G+TL++A+LVVFAELFWNPG+L
Sbjct: 773 YIRIDGNTSSADRQSLCHKFQFSEKSCVAVLSITAANMGLTLSSADLVVFAELFWNPGVL 832
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
QAEDR HRIGQ SV I YLVAK TADDYLWP++ K+ V
Sbjct: 833 IQAEDRVHRIGQTSSVNIHYLVAKGTADDYLWPMIQEKIKV 873
>UNIPROTKB|H7BYI2 [details] [associations]
symbol:SMARCAL1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A-like protein 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR010003
Pfam:PF00176 Pfam:PF00271 Pfam:PF07443 PROSITE:PS51194
PROSITE:PS51467 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0016568 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC098820 HGNC:HGNC:11102
ProteinModelPortal:H7BYI2 Ensembl:ENST00000392128 Bgee:H7BYI2
Uniprot:H7BYI2
Length = 796
Score = 345 (126.5 bits), Expect = 2.0e-30, P = 2.0e-30
Identities = 67/101 (66%), Positives = 79/101 (78%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
+IRIDGS S ER+ + QFQ ++ VAVLSITAAN G+T ++A+LVVFAELFWNPG+L
Sbjct: 594 HIRIDGSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTFSSADLVVFAELFWNPGVL 653
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
QAEDR HRIGQ SV I YLVAK TADDYLWPL+ K+ V
Sbjct: 654 IQAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPLIQEKIKV 694
>UNIPROTKB|Q0P4U8 [details] [associations]
symbol:smarcal1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A-like protein 1"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000733 "DNA
strand renaturation" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0006259 "DNA metabolic process" evidence=ISS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0036310 "annealing helicase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR010003 Pfam:PF00176 Pfam:PF00271 Pfam:PF07443
PROSITE:PS51194 PROSITE:PS51467 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006357 GO:GO:0016568
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0036310 GO:GO:0008094
GeneTree:ENSGT00630000089754 CTD:50485 HOGENOM:HOG000018734
HOVERGEN:HBG054110 KO:K14440 EMBL:BC121897 RefSeq:NP_001072923.1
UniGene:Str.47258 ProteinModelPortal:Q0P4U8 STRING:Q0P4U8
Ensembl:ENSXETT00000000989 GeneID:780385 KEGG:xtr:780385
Xenbase:XB-GENE-493391 OMA:ARCKAAM Bgee:Q0P4U8 Uniprot:Q0P4U8
Length = 942
Score = 346 (126.9 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 67/101 (66%), Positives = 81/101 (80%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
YIRIDG+ S +R+S+ +FQ +K VAVLSITAAN G+TL++A+LVVFAELFWNPG+L
Sbjct: 755 YIRIDGNTSSADRQSLCHKFQMSEKSCVAVLSITAANMGLTLSSADLVVFAELFWNPGVL 814
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
QAEDR HRIGQ SV I YLVAK TADDYLWP++ K+ V
Sbjct: 815 IQAEDRVHRIGQTSSVNIHYLVAKGTADDYLWPMIQEKIKV 855
>UNIPROTKB|Q9NZC9 [details] [associations]
symbol:SMARCAL1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A-like protein 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0036310 "annealing helicase activity"
evidence=IDA;IMP] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IMP] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0006259 "DNA metabolic
process" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0000733 "DNA strand renaturation" evidence=IDA;IMP]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR010003
Pfam:PF00176 Pfam:PF00271 Pfam:PF07443 PROSITE:PS51194
PROSITE:PS51467 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 EMBL:CH471063 GO:GO:0006357 GO:GO:0016568
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0036310 GO:GO:0008094 CTD:50485
HOVERGEN:HBG054110 KO:K14440 OrthoDB:EOG4RFKRT EMBL:AF082179
EMBL:AF210842 EMBL:AF210833 EMBL:AF210834 EMBL:AF210835
EMBL:AF210836 EMBL:AF210837 EMBL:AF210838 EMBL:AF210839
EMBL:AF210840 EMBL:AF210841 EMBL:AF432223 EMBL:AC098820
EMBL:BC016482 EMBL:BC043341 EMBL:AL122076 EMBL:AK000117
IPI:IPI00386311 PIR:T34557 RefSeq:NP_001120679.1 RefSeq:NP_054859.2
UniGene:Hs.516674 ProteinModelPortal:Q9NZC9 SMR:Q9NZC9
IntAct:Q9NZC9 STRING:Q9NZC9 PhosphoSite:Q9NZC9 DMDM:60390962
PRIDE:Q9NZC9 DNASU:50485 Ensembl:ENST00000357276
Ensembl:ENST00000358207 GeneID:50485 KEGG:hsa:50485 UCSC:uc002vgc.4
GeneCards:GC02P217277 HGNC:HGNC:11102 HPA:HPA020337 MIM:242900
MIM:606622 neXtProt:NX_Q9NZC9 Orphanet:1830 PharmGKB:PA35952
InParanoid:Q9NZC9 OMA:FKQQNLS GenomeRNAi:50485 NextBio:53040
ArrayExpress:Q9NZC9 Bgee:Q9NZC9 CleanEx:HS_SMARCAL1
Genevestigator:Q9NZC9 GermOnline:ENSG00000138375 Uniprot:Q9NZC9
Length = 954
Score = 345 (126.5 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 67/101 (66%), Positives = 79/101 (78%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
+IRIDGS S ER+ + QFQ ++ VAVLSITAAN G+T ++A+LVVFAELFWNPG+L
Sbjct: 752 HIRIDGSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTFSSADLVVFAELFWNPGVL 811
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
QAEDR HRIGQ SV I YLVAK TADDYLWPL+ K+ V
Sbjct: 812 IQAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPLIQEKIKV 852
>UNIPROTKB|E2RGL2 [details] [associations]
symbol:SMARCAL1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0036310 "annealing helicase activity"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR010003
Pfam:PF00176 Pfam:PF00271 Pfam:PF07443 PROSITE:PS51194
PROSITE:PS51467 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006357 GO:GO:0016568 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0008094
GeneTree:ENSGT00630000089754 CTD:50485 KO:K14440 OMA:FKQQNLS
EMBL:AAEX03018122 RefSeq:XP_536062.2 UniGene:Cfa.5087
Ensembl:ENSCAFT00000022962 GeneID:478903 KEGG:cfa:478903
NextBio:20854171 Uniprot:E2RGL2
Length = 961
Score = 344 (126.2 bits), Expect = 3.9e-30, P = 3.9e-30
Identities = 67/101 (66%), Positives = 78/101 (77%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
+I IDGS S +R+ + QFQ +K VAVLSITAAN G+T T+A+LVVFAELFWNPG+L
Sbjct: 759 HIHIDGSTSSADREDLCQQFQLFEKHAVAVLSITAANMGLTFTSADLVVFAELFWNPGVL 818
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
QAEDR HRIGQ SV I YLVAK TADDYLWPL+ K+ V
Sbjct: 819 LQAEDRVHRIGQSSSVSIHYLVAKGTADDYLWPLIQEKIKV 859
>WB|WBGene00015806 [details] [associations]
symbol:C16A3.1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0000003 "reproduction" evidence=IMP] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR010003 Pfam:PF00176 Pfam:PF00271
Pfam:PF07443 PROSITE:PS51194 PROSITE:PS51467 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0000003
GO:GO:0006357 GO:GO:0016568 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0036310
GO:GO:0008094 GeneTree:ENSGT00630000089754 EMBL:FO080367
HOGENOM:HOG000018734 KO:K14440 RefSeq:NP_498400.1
RefSeq:NP_498401.2 RefSeq:NP_741192.1 UniGene:Cel.8144
ProteinModelPortal:Q8MNV7 SMR:Q8MNV7 PaxDb:Q8MNV7 PRIDE:Q8MNV7
EnsemblMetazoa:C16A3.1c GeneID:175907 KEGG:cel:CELE_C16A3.1
UCSC:C16A3.1a CTD:175907 WormBase:C16A3.1a WormBase:C16A3.1b
WormBase:C16A3.1c InParanoid:Q8MNV7 OMA:IDGKTPS NextBio:890246
Uniprot:Q8MNV7
Length = 690
Score = 334 (122.6 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 65/100 (65%), Positives = 79/100 (79%)
Query: 2 IRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGILT 61
IRIDG S R ++ D FQ +D RVAVLSITAA GITLTAA++VVFAE+ +NPG L
Sbjct: 521 IRIDGKTPSHRRTALCDSFQTDDNIRVAVLSITAAGVGITLTAASVVVFAEIHFNPGYLV 580
Query: 62 QAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
QAEDRAHR+GQ+DSV +QYL+AK+TADD +W +V KLDV
Sbjct: 581 QAEDRAHRVGQKDSVFVQYLIAKKTADDVMWNMVQQKLDV 620
>UNIPROTKB|Q8MNV7 [details] [associations]
symbol:C16A3.1 "Putative SMARCAL1-like protein"
species:6239 "Caenorhabditis elegans" [GO:0000733 "DNA strand
renaturation" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0036310 "annealing helicase activity"
evidence=ISS] [GO:0006259 "DNA metabolic process" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR010003
Pfam:PF00176 Pfam:PF00271 Pfam:PF07443 PROSITE:PS51194
PROSITE:PS51467 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0000003 GO:GO:0006357 GO:GO:0016568
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0036310 GO:GO:0008094
GeneTree:ENSGT00630000089754 EMBL:FO080367 HOGENOM:HOG000018734
KO:K14440 RefSeq:NP_498400.1 RefSeq:NP_498401.2 RefSeq:NP_741192.1
UniGene:Cel.8144 ProteinModelPortal:Q8MNV7 SMR:Q8MNV7 PaxDb:Q8MNV7
PRIDE:Q8MNV7 EnsemblMetazoa:C16A3.1c GeneID:175907
KEGG:cel:CELE_C16A3.1 UCSC:C16A3.1a CTD:175907 WormBase:C16A3.1a
WormBase:C16A3.1b WormBase:C16A3.1c InParanoid:Q8MNV7 OMA:IDGKTPS
NextBio:890246 Uniprot:Q8MNV7
Length = 690
Score = 334 (122.6 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 65/100 (65%), Positives = 79/100 (79%)
Query: 2 IRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGILT 61
IRIDG S R ++ D FQ +D RVAVLSITAA GITLTAA++VVFAE+ +NPG L
Sbjct: 521 IRIDGKTPSHRRTALCDSFQTDDNIRVAVLSITAAGVGITLTAASVVVFAEIHFNPGYLV 580
Query: 62 QAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
QAEDRAHR+GQ+DSV +QYL+AK+TADD +W +V KLDV
Sbjct: 581 QAEDRAHRVGQKDSVFVQYLIAKKTADDVMWNMVQQKLDV 620
>RGD|1306134 [details] [associations]
symbol:Smarcal1 "Swi/SNF related matrix associated, actin
dependent regulator of chromatin, subfamily a-like 1" species:10116
"Rattus norvegicus" [GO:0000733 "DNA strand renaturation"
evidence=ISO;ISS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006259 "DNA metabolic process" evidence=ISO;ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISO;ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO;ISS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0036310
"annealing helicase activity" evidence=ISO;ISS] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR010003 Pfam:PF00176 Pfam:PF00271
Pfam:PF07443 PROSITE:PS51194 PROSITE:PS51467 SMART:SM00490
RGD:1306134 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0006357
GO:GO:0016568 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0036310 GO:GO:0008094
GeneTree:ENSGT00630000089754 EMBL:CH474004 CTD:50485
HOGENOM:HOG000018734 HOVERGEN:HBG054110 KO:K14440 OrthoDB:EOG4RFKRT
EMBL:BC168154 IPI:IPI00362713 RefSeq:NP_001101692.1
UniGene:Rn.34679 STRING:B4F769 PhosphoSite:B4F769 PRIDE:B4F769
Ensembl:ENSRNOT00000022459 GeneID:316477 KEGG:rno:316477
UCSC:RGD:1306134 NextBio:670913 Genevestigator:B4F769
Uniprot:B4F769
Length = 910
Score = 334 (122.6 bits), Expect = 4.1e-29, P = 4.1e-29
Identities = 66/101 (65%), Positives = 78/101 (77%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
+IRIDGS S +R+ + QFQ VAVLSITAAN G+T ++A+LVVFAELFWNPG+L
Sbjct: 708 HIRIDGSTPSADREDLCQQFQLSKGHTVAVLSITAANMGLTFSSADLVVFAELFWNPGVL 767
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
QAEDR HRIGQ +SV I YLVAK TADDYLWPL+ K+ V
Sbjct: 768 IQAEDRVHRIGQTNSVGIHYLVAKGTADDYLWPLIQEKIKV 808
>ZFIN|ZDB-GENE-041210-303 [details] [associations]
symbol:smarcal1 "SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, subfamily
a-like 1" species:7955 "Danio rerio" [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0022402 "cell cycle process" evidence=IMP] [GO:0001525
"angiogenesis" evidence=IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0048589 "developmental growth"
evidence=IMP] [GO:0051216 "cartilage development" evidence=IMP]
[GO:0030097 "hemopoiesis" evidence=IMP] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0006259 "DNA metabolic process" evidence=ISS] [GO:0036310
"annealing helicase activity" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR010003 Pfam:PF00176 Pfam:PF00271 Pfam:PF07443
PROSITE:PS51194 PROSITE:PS51467 SMART:SM00490
ZFIN:ZDB-GENE-041210-303 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006357 GO:GO:0001525 GO:GO:0016568 GO:GO:0051216
GO:GO:0004386 GO:GO:0030097 GO:GO:0048589 GO:GO:0010172
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0036310 GO:GO:0008094 GO:GO:0022402 CTD:50485
HOGENOM:HOG000018734 HOVERGEN:HBG054110 KO:K14440 EMBL:EU655703
IPI:IPI00896289 RefSeq:NP_001120938.1 UniGene:Dr.105797
GeneID:560412 KEGG:dre:560412 NextBio:20883429 Uniprot:B2ZFP3
Length = 807
Score = 329 (120.9 bits), Expect = 1.1e-28, P = 1.1e-28
Identities = 65/101 (64%), Positives = 79/101 (78%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
+IRIDGS S ER+ + ++FQ + VAVLSITAAN G+TL +A LVVFAELFWNPG+L
Sbjct: 656 FIRIDGSTPSAERQLLCERFQASQQSCVAVLSITAANMGLTLHSAALVVFAELFWNPGVL 715
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
QAEDR HRIGQ +V I YLVAK TADDYLWP++ K++V
Sbjct: 716 IQAEDRVHRIGQTSNVDIHYLVAKGTADDYLWPMIQAKMNV 756
>MGI|MGI:1859183 [details] [associations]
symbol:Smarcal1 "SWI/SNF related matrix associated, actin
dependent regulator of chromatin, subfamily a-like 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000733 "DNA strand renaturation" evidence=ISO] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006259 "DNA metabolic process" evidence=ISO] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO;IDA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0036310 "annealing helicase activity" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR010003
Pfam:PF00176 Pfam:PF00271 Pfam:PF07443 PROSITE:PS51194
PROSITE:PS51467 SMART:SM00490 MGI:MGI:1859183 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006357 GO:GO:0016568
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0003678 GO:GO:0036310 GO:GO:0008094
GeneTree:ENSGT00630000089754 CTD:50485 HOVERGEN:HBG054110 KO:K14440
OrthoDB:EOG4RFKRT OMA:FKQQNLS EMBL:AF088884 EMBL:AF209773
EMBL:AK042332 EMBL:AK043129 EMBL:AK077878 EMBL:AK083488
EMBL:AK154020 EMBL:AK169465 EMBL:BC029078 IPI:IPI00403353
IPI:IPI00553252 IPI:IPI00830468 IPI:IPI00918417 RefSeq:NP_061287.2
UniGene:Mm.274232 ProteinModelPortal:Q8BJL0 SMR:Q8BJL0
STRING:Q8BJL0 PhosphoSite:Q8BJL0 PaxDb:Q8BJL0 PRIDE:Q8BJL0
Ensembl:ENSMUST00000047615 Ensembl:ENSMUST00000136498 GeneID:54380
KEGG:mmu:54380 UCSC:uc007bko.2 UCSC:uc007bkq.2 UCSC:uc007bkr.2
UCSC:uc007bks.2 InParanoid:Q3TEQ9 NextBio:311200 Bgee:Q8BJL0
Genevestigator:Q8BJL0 GermOnline:ENSMUSG00000039354 Uniprot:Q8BJL0
Length = 910
Score = 326 (119.8 bits), Expect = 2.9e-28, P = 2.9e-28
Identities = 64/101 (63%), Positives = 77/101 (76%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
+IRIDGS S +R++ +FQ VA+LSITAAN G+T + A+LVVFAELFWNPG+L
Sbjct: 710 HIRIDGSTPSADREAQCQRFQLSKGHTVALLSITAANMGLTFSTADLVVFAELFWNPGVL 769
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
QAEDR HRIGQ +SV I YLVAK TADDYLWPL+ K+ V
Sbjct: 770 IQAEDRVHRIGQTNSVSIHYLVAKGTADDYLWPLIQEKIKV 810
>UNIPROTKB|F1MDP3 [details] [associations]
symbol:SMARCAL1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A-like protein 1"
species:9913 "Bos taurus" [GO:0036310 "annealing helicase activity"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR010003
Pfam:PF00176 Pfam:PF00271 Pfam:PF07443 PROSITE:PS51194
PROSITE:PS51467 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006357 GO:GO:0016568 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0008094
GeneTree:ENSGT00630000089754 IPI:IPI00711563 OMA:FKQQNLS
EMBL:DAAA02005900 Ensembl:ENSBTAT00000005013 Uniprot:F1MDP3
Length = 940
Score = 306 (112.8 bits), Expect = 4.4e-26, P = 4.4e-26
Identities = 61/101 (60%), Positives = 73/101 (72%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
+IRIDGS S +R++ F R VLSITAAN G+T ++A+LVVF ELFWNPG+L
Sbjct: 748 HIRIDGSTSSADRETSASSFSCPRALR-GVLSITAANMGLTFSSADLVVFGELFWNPGVL 806
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
QAEDR HRIGQ SV I YLVA+ TADDYLWPL+ K+ V
Sbjct: 807 MQAEDRVHRIGQLSSVSIHYLVARGTADDYLWPLIQEKIKV 847
>UNIPROTKB|Q9TTA5 [details] [associations]
symbol:SMARCAL1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A-like protein 1"
species:9913 "Bos taurus" [GO:0000733 "DNA strand renaturation"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0006259 "DNA metabolic process" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0036310 "annealing helicase
activity" evidence=ISS] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR010003 Pfam:PF00176 Pfam:PF00271
Pfam:PF07443 PROSITE:PS51194 PROSITE:PS51467 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0006357
GO:GO:0016568 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0036310 GO:GO:0008094
EMBL:AF173643 IPI:IPI00711563 RefSeq:NP_788839.1 UniGene:Bt.16022
ProteinModelPortal:Q9TTA5 STRING:Q9TTA5 PRIDE:Q9TTA5 GeneID:338072
KEGG:bta:338072 CTD:50485 HOGENOM:HOG000018734 HOVERGEN:HBG054110
InParanoid:Q9TTA5 KO:K14440 OrthoDB:EOG4RFKRT NextBio:20812522
Uniprot:Q9TTA5
Length = 941
Score = 306 (112.8 bits), Expect = 4.4e-26, P = 4.4e-26
Identities = 61/101 (60%), Positives = 73/101 (72%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
+IRIDGS S +R++ F R VLSITAAN G+T ++A+LVVF ELFWNPG+L
Sbjct: 749 HIRIDGSTSSADRETSASSFSCPRALR-GVLSITAANMGLTFSSADLVVFGELFWNPGVL 807
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
QAEDR HRIGQ SV I YLVA+ TADDYLWPL+ K+ V
Sbjct: 808 MQAEDRVHRIGQLSSVSIHYLVARGTADDYLWPLIQEKIKV 848
>DICTYBASE|DDB_G0274965 [details] [associations]
symbol:DDB_G0274965 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR010003 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
PROSITE:PS51467 SMART:SM00490 dictyBase:DDB_G0274965 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0016568 EMBL:AAFI02000012
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 KO:K14440 RefSeq:XP_644229.1
EnsemblProtists:DDB0233438 GeneID:8619658 KEGG:ddi:DDB_G0274965
InParanoid:Q554U4 Uniprot:Q554U4
Length = 1400
Score = 302 (111.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 57/101 (56%), Positives = 74/101 (73%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
YIRIDGS + +R++ V +FQ +VA+LSITAA +G+TLTA+NLVVF EL+W PG+L
Sbjct: 1045 YIRIDGSTPAVQRQAFVTKFQNNASCKVALLSITAAGTGLTLTASNLVVFVELYWTPGVL 1104
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
QAEDR HRIGQ + I YL+ K T DD +WP + KL+V
Sbjct: 1105 RQAEDRIHRIGQTKTCYIHYLIGKNTLDDRIWPTICNKLEV 1145
>RGD|1564952 [details] [associations]
symbol:Zranb3 "zinc finger, RAN-binding domain containing 3"
species:10116 "Rattus norvegicus" [GO:0000733 "DNA strand
renaturation" evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0004520
"endodeoxyribonuclease activity" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=ISO]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0009411 "response to UV" evidence=ISO] [GO:0031297 "replication
fork processing" evidence=ISO] [GO:0036292 "DNA rewinding"
evidence=ISO] [GO:0036310 "annealing helicase activity"
evidence=ISO] [GO:0043596 "nuclear replication fork" evidence=ISO]
[GO:0045910 "negative regulation of DNA recombination"
evidence=ISO] [GO:0048478 "replication fork protection"
evidence=ISO] [GO:0070530 "K63-linked polyubiquitin binding"
evidence=ISO] [GO:0003678 "DNA helicase activity" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 RGD:1564952 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00630000089754 IPI:IPI00950819
Ensembl:ENSRNOT00000067965 UCSC:RGD:1564952 ArrayExpress:D3ZVX7
Uniprot:D3ZVX7
Length = 465
Score = 289 (106.8 bits), Expect = 3.8e-25, P = 3.8e-25
Identities = 60/101 (59%), Positives = 72/101 (71%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
YIRIDGSV S ER +V+QFQ + RVA+LSI AA G+T TAA+ VVFAELFW+PG +
Sbjct: 305 YIRIDGSVPSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELFWDPGHI 364
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
QAEDRAHRIGQ SV I YL+A T D +W ++ K V
Sbjct: 365 KQAEDRAHRIGQCSSVNIHYLIANGTLDSLMWAMLNRKAQV 405
>TAIR|locus:2007775 [details] [associations]
symbol:CHR18 "chromatin remodeling factor18" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR010003
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 PROSITE:PS51467
SMART:SM00490 EMBL:CP002684 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0016568 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K14440 OMA:IDGKTPS IPI:IPI00530561
RefSeq:NP_175265.3 UniGene:At.38447 UniGene:At.71075
ProteinModelPortal:F4HWU9 SMR:F4HWU9 PRIDE:F4HWU9
EnsemblPlants:AT1G48310.1 GeneID:841251 KEGG:ath:AT1G48310
Uniprot:F4HWU9
Length = 673
Score = 292 (107.8 bits), Expect = 7.0e-25, P = 7.0e-25
Identities = 59/99 (59%), Positives = 72/99 (72%)
Query: 2 IRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGILT 61
IRIDGS + R+++V FQ +D+ + AVLSI AA GITLTAA+ V+FAEL W PG L
Sbjct: 512 IRIDGSTPASSRQALVSDFQDKDEIKAAVLSIRAAGVGITLTAASTVIFAELSWTPGDLI 571
Query: 62 QAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLD 100
QAEDRAHRIGQ SV I YL+A T DD +W +V +KLD
Sbjct: 572 QAEDRAHRIGQVSSVNIHYLLANDTVDDIIWDVVQSKLD 610
>DICTYBASE|DDB_G0281559 [details] [associations]
symbol:DDB_G0281559 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR010003 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
PROSITE:PS51467 SMART:SM00490 dictyBase:DDB_G0281559 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000152_GR GO:GO:0003677 GO:GO:0016568
EMBL:AAFI02000042 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 RefSeq:XP_640643.1 ProteinModelPortal:Q54TE8
EnsemblProtists:DDB0214904 GeneID:8623254 KEGG:ddi:DDB_G0281559
InParanoid:Q54TE8 OMA:ENTIRRH Uniprot:Q54TE8
Length = 1021
Score = 293 (108.2 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 57/98 (58%), Positives = 72/98 (73%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
+I+IDGS ++ R V+ FQ + RVAVLSITAA +G+TLTAA V+FAEL W PG+L
Sbjct: 678 FIKIDGSTPAQNRNDYVNDFQNDPNCRVAVLSITAAGTGLTLTAATCVIFAELSWTPGVL 737
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTK 98
QAEDRAHR GQ SVL+QYL+A T D+ +W LV +K
Sbjct: 738 FQAEDRAHRYGQTSSVLVQYLIALGTVDEMIWSLVESK 775
>FB|FBgn0031655 [details] [associations]
symbol:Marcal1 "Marcal1" species:7227 "Drosophila
melanogaster" [GO:0004386 "helicase activity" evidence=ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0005705 "polytene chromosome interband" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR010003 Pfam:PF00176 Pfam:PF00271
Pfam:PF07443 PROSITE:PS51194 PROSITE:PS51467 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 EMBL:AE014134 GO:GO:0003677
GO:GO:0006357 GO:GO:0016568 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0036310
GO:GO:0008094 GO:GO:0005705 GeneTree:ENSGT00630000089754 KO:K14440
OMA:IDGKTPS EMBL:BT011033 RefSeq:NP_608883.1 UniGene:Dm.18320
ProteinModelPortal:Q9VMX6 SMR:Q9VMX6 PaxDb:Q9VMX6 PRIDE:Q9VMX6
EnsemblMetazoa:FBtr0078992 GeneID:33709 KEGG:dme:Dmel_CG3753
UCSC:CG3753-RA CTD:33709 FlyBase:FBgn0031655 InParanoid:Q9VMX6
OrthoDB:EOG47D7XT PhylomeDB:Q9VMX6 GenomeRNAi:33709 NextBio:784900
Bgee:Q9VMX6 Uniprot:Q9VMX6
Length = 755
Score = 290 (107.1 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 57/105 (54%), Positives = 72/105 (68%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
YIRIDG S+ R VD FQ + +VA+LS+ A NSGITLTAA ++VFAEL WNP L
Sbjct: 562 YIRIDGQTRSDHRSDSVDTFQKKSSCKVALLSLKACNSGITLTAAEIIVFAELDWNPSTL 621
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QAE RAHRIGQ V+ +YL+A TADD +W ++ K +V S +
Sbjct: 622 AQAESRAHRIGQTKPVICRYLIAHNTADDIIWNMLKNKQEVLSKV 666
>ZFIN|ZDB-GENE-060712-1 [details] [associations]
symbol:zranb3 "zinc finger, RAN-binding domain
containing 3" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-060712-1 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 HOVERGEN:HBG054110
EMBL:BC078216 IPI:IPI00496409 UniGene:Dr.132615
HOGENOM:HOG000147805 InParanoid:Q6DC67 Uniprot:Q6DC67
Length = 541
Score = 283 (104.7 bits), Expect = 3.6e-24, P = 3.6e-24
Identities = 59/98 (60%), Positives = 71/98 (72%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
YIRIDGSV S ER +V +FQ + RVAVLSI AA G+T TAA+ VVFAEL+WNPG +
Sbjct: 362 YIRIDGSVPSAERIQLVHRFQNDPDTRVAVLSIQAAGQGLTFTAASHVVFAELYWNPGHI 421
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTK 98
QAEDRAHRIGQ +V I YL+AK T D +W ++ K
Sbjct: 422 KQAEDRAHRIGQTATVHIHYLIAKGTFDTVMWAMLNRK 459
>UNIPROTKB|E2RK04 [details] [associations]
symbol:ZRANB3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR001876 InterPro:IPR002711 Pfam:PF00176 Pfam:PF00271
Pfam:PF00641 Pfam:PF01844 PROSITE:PS01358 PROSITE:PS50199
PROSITE:PS51194 SMART:SM00490 SMART:SM00547 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0005622 GO:GO:0004386
GO:GO:0004519 InterPro:IPR003615 SMART:SM00507 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00630000089754
OMA:ACTEAVI EMBL:AAEX03011911 EMBL:AAEX03011910
Ensembl:ENSCAFT00000008142 Uniprot:E2RK04
Length = 1069
Score = 286 (105.7 bits), Expect = 7.4e-24, P = 7.4e-24
Identities = 60/101 (59%), Positives = 71/101 (70%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
YIRIDGSV S ER +V+QFQ + RVA+LSI AA G+T TAA VVFAEL+W+PG +
Sbjct: 366 YIRIDGSVPSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAATYVVFAELYWDPGHI 425
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
QAEDRAHRIGQ SV I YLVA T D +W ++ K V
Sbjct: 426 KQAEDRAHRIGQCSSVNIHYLVANGTLDTLMWGMLNRKTQV 466
>MGI|MGI:1918362 [details] [associations]
symbol:Zranb3 "zinc finger, RAN-binding domain containing 3"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000733 "DNA strand renaturation" evidence=ISO]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0004519
"endonuclease activity" evidence=IEA] [GO:0004520
"endodeoxyribonuclease activity" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0006281 "DNA repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0008152
"metabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009411 "response to UV" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0031297
"replication fork processing" evidence=ISO] [GO:0036292 "DNA
rewinding" evidence=ISO] [GO:0036310 "annealing helicase activity"
evidence=ISO] [GO:0043596 "nuclear replication fork" evidence=ISO]
[GO:0045910 "negative regulation of DNA recombination"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048478 "replication fork protection" evidence=ISO] [GO:0070530
"K63-linked polyubiquitin binding" evidence=ISO] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR001876 InterPro:IPR002711
Pfam:PF00176 Pfam:PF00271 Pfam:PF01844 PROSITE:PS01358
PROSITE:PS50199 PROSITE:PS51194 SMART:SM00490 SMART:SM00547
MGI:MGI:1918362 GO:GO:0005524 GO:GO:0009411 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006281 GO:GO:0043596
GO:GO:0004386 InterPro:IPR003615 SMART:SM00507 GO:GO:0004520
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0036310 GO:GO:0045910 GO:GO:0031297 GO:GO:0048478
GO:GO:0070530 GeneTree:ENSGT00630000089754 HSSP:Q9ES54 CTD:84083
GO:GO:0036292 HOGENOM:HOG000031233 HOVERGEN:HBG062387 OMA:ACTEAVI
EMBL:AK050039 EMBL:AK083641 EMBL:BC066035 EMBL:BC117921
EMBL:BC117922 IPI:IPI00676562 RefSeq:NP_081954.1 UniGene:Mm.425048
ProteinModelPortal:Q6NZP1 SMR:Q6NZP1 PhosphoSite:Q6NZP1
PRIDE:Q6NZP1 Ensembl:ENSMUST00000086614 GeneID:226409
KEGG:mmu:226409 UCSC:uc007cld.1 InParanoid:Q6NZP1 OrthoDB:EOG42820X
NextBio:378126 Bgee:Q6NZP1 CleanEx:MM_ZRANB3 Genevestigator:Q6NZP1
Uniprot:Q6NZP1
Length = 1069
Score = 286 (105.7 bits), Expect = 7.4e-24, P = 7.4e-24
Identities = 59/101 (58%), Positives = 72/101 (71%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
YIRIDGSV S ER +V+QFQ + RVA+LSI AA G+T TAA+ VVFAEL+W+PG +
Sbjct: 365 YIRIDGSVPSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELYWDPGHI 424
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
QAEDRAHRIGQ SV I YL+A T D +W ++ K V
Sbjct: 425 KQAEDRAHRIGQCSSVNIHYLIANGTLDSLMWAMLNRKAQV 465
>UNIPROTKB|F5GYN7 [details] [associations]
symbol:ZRANB3 "Endonuclease ZRANB3" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR001876 InterPro:IPR002711 Pfam:PF00176 Pfam:PF00271
Pfam:PF00641 Pfam:PF01844 PROSITE:PS01358 PROSITE:PS50199
PROSITE:PS51194 SMART:SM00490 SMART:SM00547 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0005622 GO:GO:0004386
GO:GO:0004519 InterPro:IPR003615 SMART:SM00507 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC012450 EMBL:AC016742
EMBL:AC017031 EMBL:AC020602 EMBL:AC064850 HGNC:HGNC:25249
ChiTaRS:ZRANB3 IPI:IPI01013366 ProteinModelPortal:F5GYN7 SMR:F5GYN7
Ensembl:ENST00000536680 ArrayExpress:F5GYN7 Bgee:F5GYN7
Uniprot:F5GYN7
Length = 1077
Score = 286 (105.7 bits), Expect = 7.5e-24, P = 7.5e-24
Identities = 59/101 (58%), Positives = 72/101 (71%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
YIRIDGSV S ER +V+QFQ + RVA+LSI AA G+T TAA+ VVFAEL+W+PG +
Sbjct: 365 YIRIDGSVSSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELYWDPGHI 424
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
QAEDRAHRIGQ SV I YL+A T D +W ++ K V
Sbjct: 425 KQAEDRAHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQV 465
>UNIPROTKB|Q5FWF4 [details] [associations]
symbol:ZRANB3 "DNA annealing helicase and endonuclease
ZRANB3" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0036292 "DNA rewinding"
evidence=IDA] [GO:0036310 "annealing helicase activity"
evidence=IDA] [GO:0003678 "DNA helicase activity" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0043596 "nuclear replication fork" evidence=IDA] [GO:0070530
"K63-linked polyubiquitin binding" evidence=IDA] [GO:0004520
"endodeoxyribonuclease activity" evidence=IDA] [GO:0006281 "DNA
repair" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009411 "response to UV" evidence=IDA] [GO:0031297 "replication
fork processing" evidence=IDA] [GO:0048478 "replication fork
protection" evidence=IDA] [GO:0045910 "negative regulation of DNA
recombination" evidence=IDA] [GO:0000733 "DNA strand renaturation"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR001876 InterPro:IPR002711 Pfam:PF00176 Pfam:PF00271
Pfam:PF00641 Pfam:PF01844 PROSITE:PS01358 PROSITE:PS50199
PROSITE:PS51194 SMART:SM00490 SMART:SM00547 GO:GO:0005524
GO:GO:0009411 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006281 GO:GO:0043596 EMBL:CH471058 GO:GO:0004386
InterPro:IPR003615 SMART:SM00507 GO:GO:0004520 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0036310 GO:GO:0045910 GO:GO:0031297 GO:GO:0048478
GO:GO:0070530 CTD:84083 GO:GO:0036292 EMBL:AL136824 EMBL:AK095362
EMBL:AK131303 EMBL:AK304601 EMBL:BX647838 EMBL:AC012450
EMBL:AC016742 EMBL:AC017031 EMBL:AC020602 EMBL:AC064850
EMBL:BC064616 EMBL:BC089429 IPI:IPI00030279 IPI:IPI00796701
IPI:IPI00926904 RefSeq:NP_115519.2 UniGene:Hs.658422
ProteinModelPortal:Q5FWF4 SMR:Q5FWF4 PhosphoSite:Q5FWF4
DMDM:74741477 PRIDE:Q5FWF4 DNASU:84083 Ensembl:ENST00000264159
Ensembl:ENST00000401392 Ensembl:ENST00000412849
Ensembl:ENST00000452187 GeneID:84083 KEGG:hsa:84083 UCSC:uc002tuk.3
UCSC:uc002tul.3 GeneCards:GC02M135894 HGNC:HGNC:25249 HPA:HPA043073
HPA:HPA043301 neXtProt:NX_Q5FWF4 PharmGKB:PA134871612
HOGENOM:HOG000031233 HOVERGEN:HBG062387 InParanoid:Q5FWF4
OMA:ACTEAVI ChiTaRS:ZRANB3 GenomeRNAi:84083 NextBio:73311
ArrayExpress:Q5FWF4 Bgee:Q5FWF4 CleanEx:HS_ZRANB3
Genevestigator:Q5FWF4 Uniprot:Q5FWF4
Length = 1079
Score = 286 (105.7 bits), Expect = 7.5e-24, P = 7.5e-24
Identities = 59/101 (58%), Positives = 72/101 (71%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
YIRIDGSV S ER +V+QFQ + RVA+LSI AA G+T TAA+ VVFAEL+W+PG +
Sbjct: 365 YIRIDGSVSSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELYWDPGHI 424
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
QAEDRAHRIGQ SV I YL+A T D +W ++ K V
Sbjct: 425 KQAEDRAHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQV 465
>UNIPROTKB|K7DXW5 [details] [associations]
symbol:Bt.28179 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR001876 InterPro:IPR002711 Pfam:PF00176 Pfam:PF00271
Pfam:PF00641 Pfam:PF01844 PROSITE:PS01358 PROSITE:PS50199
PROSITE:PS51194 SMART:SM00490 SMART:SM00547 InterPro:IPR003615
SMART:SM00507 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00630000089754 EMBL:DAAA02005001 EMBL:DAAA02005002
Ensembl:ENSBTAT00000038374 Uniprot:K7DXW5
Length = 1001
Score = 285 (105.4 bits), Expect = 8.6e-24, P = 8.6e-24
Identities = 59/101 (58%), Positives = 72/101 (71%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
YIRIDGSV S ER +V+QFQ + + RVA+LSI AA G+T TAA VVFAEL+W+PG +
Sbjct: 293 YIRIDGSVPSSERIHLVNQFQKDPETRVAILSIQAAGQGLTFTAATHVVFAELYWDPGHI 352
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
QAEDRAHRIGQ SV I YL+A T D +W ++ K V
Sbjct: 353 KQAEDRAHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQV 393
>UNIPROTKB|F1S0D5 [details] [associations]
symbol:ZRANB3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070530 "K63-linked polyubiquitin binding"
evidence=IEA] [GO:0048478 "replication fork protection"
evidence=IEA] [GO:0045910 "negative regulation of DNA
recombination" evidence=IEA] [GO:0043596 "nuclear replication fork"
evidence=IEA] [GO:0036310 "annealing helicase activity"
evidence=IEA] [GO:0036292 "DNA rewinding" evidence=IEA] [GO:0031297
"replication fork processing" evidence=IEA] [GO:0009411 "response
to UV" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0004520 "endodeoxyribonuclease activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR001876
InterPro:IPR002711 Pfam:PF00176 Pfam:PF00271 Pfam:PF01844
PROSITE:PS01358 PROSITE:PS50199 PROSITE:PS51194 SMART:SM00490
SMART:SM00547 GO:GO:0005524 GO:GO:0003677 GO:GO:0008270
GO:GO:0005622 GO:GO:0004386 GO:GO:0004519 InterPro:IPR003615
SMART:SM00507 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00630000089754 OMA:ACTEAVI EMBL:CU466471
EMBL:CU570637 Ensembl:ENSSSCT00000017094 Uniprot:F1S0D5
Length = 1021
Score = 285 (105.4 bits), Expect = 8.8e-24, P = 8.8e-24
Identities = 58/101 (57%), Positives = 72/101 (71%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+RIDGSV S ER +V+QFQ + + RVA+LSI AA G+T TAA VVFAEL+W+PG +
Sbjct: 304 YVRIDGSVPSSERIHLVNQFQKDPETRVAILSIQAAGQGLTFTAATHVVFAELYWDPGHI 363
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
QAEDRAHRIGQ SV I YL+A T D +W ++ K V
Sbjct: 364 KQAEDRAHRIGQCSSVNIHYLIANGTLDTLMWAMLNRKAQV 404
>UNIPROTKB|E1BB03 [details] [associations]
symbol:ZRANB3 "DNA annealing helicase and endonuclease
ZRANB3" species:9913 "Bos taurus" [GO:0048478 "replication fork
protection" evidence=ISS] [GO:0045910 "negative regulation of DNA
recombination" evidence=ISS] [GO:0036292 "DNA rewinding"
evidence=ISS] [GO:0031297 "replication fork processing"
evidence=ISS] [GO:0009411 "response to UV" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] [GO:0043596 "nuclear
replication fork" evidence=ISS] [GO:0070530 "K63-linked
polyubiquitin binding" evidence=ISS] [GO:0036310 "annealing
helicase activity" evidence=ISS] [GO:0004520 "endodeoxyribonuclease
activity" evidence=ISS] [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR001876 InterPro:IPR002711 Pfam:PF00176 Pfam:PF00271
Pfam:PF00641 Pfam:PF01844 PROSITE:PS01358 PROSITE:PS50199
PROSITE:PS51194 SMART:SM00490 SMART:SM00547 GO:GO:0005524
GO:GO:0009411 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006281 GO:GO:0043596 GO:GO:0004386 InterPro:IPR003615
SMART:SM00507 GO:GO:0004520 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0036310 GO:GO:0045910 GO:GO:0031297
GO:GO:0048478 GO:GO:0070530 EMBL:DAAA02005001 EMBL:DAAA02005002
IPI:IPI00698723 RefSeq:XP_002685457.1 RefSeq:XP_003581888.1
GeneID:529922 KEGG:bta:529922 CTD:84083 GO:GO:0036292
Uniprot:E1BB03
Length = 1074
Score = 285 (105.4 bits), Expect = 9.6e-24, P = 9.6e-24
Identities = 59/101 (58%), Positives = 72/101 (71%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
YIRIDGSV S ER +V+QFQ + + RVA+LSI AA G+T TAA VVFAEL+W+PG +
Sbjct: 365 YIRIDGSVPSSERIHLVNQFQKDPETRVAILSIQAAGQGLTFTAATHVVFAELYWDPGHI 424
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
QAEDRAHRIGQ SV I YL+A T D +W ++ K V
Sbjct: 425 KQAEDRAHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQV 465
>UNIPROTKB|E1BSZ4 [details] [associations]
symbol:ZRANB3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0004519 "endonuclease
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR001876 InterPro:IPR002711 Pfam:PF00176 Pfam:PF00271
Pfam:PF01844 PROSITE:PS01358 PROSITE:PS50199 PROSITE:PS51194
SMART:SM00490 SMART:SM00547 GO:GO:0005524 GO:GO:0003677
GO:GO:0008270 GO:GO:0005622 GO:GO:0004386 GO:GO:0004519
InterPro:IPR003615 SMART:SM00507 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00630000089754 EMBL:AADN02016954
IPI:IPI00599003 Ensembl:ENSGALT00000019961 ArrayExpress:E1BSZ4
Uniprot:E1BSZ4
Length = 1078
Score = 282 (104.3 bits), Expect = 2.0e-23, P = 2.0e-23
Identities = 58/101 (57%), Positives = 72/101 (71%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
YIRIDGSV S ER +V+QFQ + RVA+LSI AA G+T TAA +VFAEL+W+PG +
Sbjct: 363 YIRIDGSVPSAERIRLVNQFQKDPDTRVAILSIQAAGQGLTFTAATHIVFAELYWDPGHI 422
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
QAEDRAHRIGQ SV I +L+AK T D +W ++ K V
Sbjct: 423 KQAEDRAHRIGQCSSVNIHFLIAKGTLDPLMWAMLNRKAKV 463
>UNIPROTKB|E1BSZ6 [details] [associations]
symbol:ZRANB3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004520 "endodeoxyribonuclease activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0009411 "response to UV"
evidence=IEA] [GO:0031297 "replication fork processing"
evidence=IEA] [GO:0036292 "DNA rewinding" evidence=IEA] [GO:0036310
"annealing helicase activity" evidence=IEA] [GO:0043596 "nuclear
replication fork" evidence=IEA] [GO:0045910 "negative regulation of
DNA recombination" evidence=IEA] [GO:0048478 "replication fork
protection" evidence=IEA] [GO:0070530 "K63-linked polyubiquitin
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR001876 InterPro:IPR002711 Pfam:PF00176 Pfam:PF00271
Pfam:PF01844 PROSITE:PS01358 PROSITE:PS50199 PROSITE:PS51194
SMART:SM00490 SMART:SM00547 GO:GO:0005524 GO:GO:0003677
GO:GO:0008270 GO:GO:0005622 GO:GO:0004386 GO:GO:0004519
InterPro:IPR003615 SMART:SM00507 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00630000089754 OMA:ACTEAVI
EMBL:AADN02016954 IPI:IPI00573139 Ensembl:ENSGALT00000019959
ArrayExpress:E1BSZ6 Uniprot:E1BSZ6
Length = 1086
Score = 282 (104.3 bits), Expect = 2.0e-23, P = 2.0e-23
Identities = 58/101 (57%), Positives = 72/101 (71%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
YIRIDGSV S ER +V+QFQ + RVA+LSI AA G+T TAA +VFAEL+W+PG +
Sbjct: 363 YIRIDGSVPSAERIRLVNQFQKDPDTRVAILSIQAAGQGLTFTAATHIVFAELYWDPGHI 422
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
QAEDRAHRIGQ SV I +L+AK T D +W ++ K V
Sbjct: 423 KQAEDRAHRIGQCSSVNIHFLIAKGTLDPLMWAMLNRKAKV 463
>GENEDB_PFALCIPARUM|PF13_0308 [details] [associations]
symbol:PF13_0308 "DNA helicase" species:5833
"Plasmodium falciparum" [GO:0003678 "DNA helicase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0003678 EMBL:AL844509 RefSeq:XP_001350286.1
ProteinModelPortal:Q8IDD0 EnsemblProtists:PF13_0308:mRNA
GeneID:814271 KEGG:pfa:PF13_0308 EuPathDB:PlasmoDB:PF3D7_1357500
HOGENOM:HOG000281688 ProtClustDB:CLSZ2433477 Uniprot:Q8IDD0
Length = 906
Score = 260 (96.6 bits), Expect = 3.4e-21, P = 3.4e-21
Identities = 51/99 (51%), Positives = 67/99 (67%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
YIR+DG E+R+ + FQ +D ++A+LSITA G+ LTAAN VVF ELFW PG +
Sbjct: 687 YIRVDGLTPMEKREIYIKNFQNDDNVKIALLSITACGMGLNLTAANTVVFGELFWVPGQI 746
Query: 61 TQAEDRAHRIGQ-QDSVLIQYLVAKQTADDYLWPLVMTK 98
QAEDRAHRIG D V I YL+A+ T D+ +W ++ K
Sbjct: 747 IQAEDRAHRIGTAHDVVNIHYLIAQNTIDEIVWKIINRK 785
>UNIPROTKB|Q8IDD0 [details] [associations]
symbol:PF13_0308 "DNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
EMBL:AL844509 RefSeq:XP_001350286.1 ProteinModelPortal:Q8IDD0
EnsemblProtists:PF13_0308:mRNA GeneID:814271 KEGG:pfa:PF13_0308
EuPathDB:PlasmoDB:PF3D7_1357500 HOGENOM:HOG000281688
ProtClustDB:CLSZ2433477 Uniprot:Q8IDD0
Length = 906
Score = 260 (96.6 bits), Expect = 3.4e-21, P = 3.4e-21
Identities = 51/99 (51%), Positives = 67/99 (67%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
YIR+DG E+R+ + FQ +D ++A+LSITA G+ LTAAN VVF ELFW PG +
Sbjct: 687 YIRVDGLTPMEKREIYIKNFQNDDNVKIALLSITACGMGLNLTAANTVVFGELFWVPGQI 746
Query: 61 TQAEDRAHRIGQ-QDSVLIQYLVAKQTADDYLWPLVMTK 98
QAEDRAHRIG D V I YL+A+ T D+ +W ++ K
Sbjct: 747 IQAEDRAHRIGTAHDVVNIHYLIAQNTIDEIVWKIINRK 785
>DICTYBASE|DDB_G0267556 [details] [associations]
symbol:DDB_G0267556 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0267556
GO:GO:0005524 GO:GO:0003677 EMBL:AAFI02000003 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
RefSeq:XP_647125.1 ProteinModelPortal:Q55GQ9
EnsemblProtists:DDB0233433 GeneID:8615929 KEGG:ddi:DDB_G0267556
InParanoid:Q55GQ9 OMA:CANVVIF ProtClustDB:CLSZ2501118
Uniprot:Q55GQ9
Length = 1159
Score = 199 (75.1 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 39/88 (44%), Positives = 58/88 (65%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
+ R+DGS ER+S++D F ++ V +LS + GI LT AN+V+F +L +NP +
Sbjct: 1028 FTRLDGSTPVNERQSIIDHFSSKETIPVFLLSTNSGGLGINLTCANVVIFYDLSFNPQVD 1087
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTAD 88
QAEDRAHR+GQ+ V+I L+A+ T D
Sbjct: 1088 RQAEDRAHRLGQEREVIIYKLLAENTVD 1115
>POMBASE|SPCC1235.05c [details] [associations]
symbol:fft2 "fun thirty related protein Fft2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=NAS] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISM;ISS] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=NAS]
[GO:0051276 "chromosome organization" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 PomBase:SPCC1235.05c GO:GO:0005829
GO:GO:0005524 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003677
GO:GO:0006338 GO:GO:0000790 GO:GO:0004003 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016585 OrthoDB:EOG4BCHW4 PIR:T40879 RefSeq:NP_587731.1
ProteinModelPortal:O74842 STRING:O74842 EnsemblFungi:SPCC1235.05c.1
GeneID:2539045 KEGG:spo:SPCC1235.05c KO:K14439 NextBio:20800219
Uniprot:O74842
Length = 1284
Score = 196 (74.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 41/99 (41%), Positives = 58/99 (58%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DGS E R+ ++DQF E+ V +LS A GI L AN+V+ + +NP
Sbjct: 967 YVRLDGSTQVEVRQDIIDQFHKEEDVTVFLLSTKAGGFGINLACANVVILYDCSYNPFDD 1026
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKL 99
QAEDRAHR+GQ V + L+ T ++Y+ L TKL
Sbjct: 1027 LQAEDRAHRVGQVREVTVIRLITDNTIEEYIQKLANTKL 1065
>POMBASE|SPAC20G8.08c [details] [associations]
symbol:fft1 "fun thirty related protein Fft1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=NAS] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 PomBase:SPAC20G8.08c
GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006338 GO:GO:0000790 GO:GO:0004003 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016585 PIR:T38130 RefSeq:NP_593325.1
ProteinModelPortal:P87114 EnsemblFungi:SPAC20G8.08c.1
GeneID:2541983 KEGG:spo:SPAC20G8.08c OrthoDB:EOG4BCHW4
NextBio:20803065 Uniprot:P87114
Length = 944
Score = 189 (71.6 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 39/105 (37%), Positives = 62/105 (59%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
++R+DGS E R+ ++D F + ++V +LS + GI LT AN+V+ + +NP
Sbjct: 807 FLRLDGSTPVETRQQLIDDFHTNENYKVFLLSTKSGGFGINLTCANIVILFDCSFNPFDD 866
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QAEDRAHR+GQ V + L+ K T ++ + L TKL + S +
Sbjct: 867 MQAEDRAHRVGQTRPVHVYRLITKNTIEENIRRLANTKLTLESSL 911
>TAIR|locus:2142753 [details] [associations]
symbol:AT5G07810 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003677
"DNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006310 "DNA recombination" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR002711 Pfam:PF00176 Pfam:PF00271
Pfam:PF01844 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002688 GO:GO:0003677 GO:GO:0004386 GO:GO:0004519
InterPro:IPR003615 SMART:SM00507 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 IPI:IPI00546687 RefSeq:NP_196398.2 UniGene:At.32666
ProteinModelPortal:F4K856 SMR:F4K856 PRIDE:F4K856
EnsemblPlants:AT5G07810.1 GeneID:830674 KEGG:ath:AT5G07810
OMA:HQINMLW Uniprot:F4K856
Length = 1190
Score = 186 (70.5 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 38/99 (38%), Positives = 57/99 (57%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
++RIDG+ +R+ V FQ+ + ++A++ + A G+ +AA VVF EL P +L
Sbjct: 581 FVRIDGTTLPRDRQLAVQSFQFSSEVKIAIIGVEAGGVGLDFSAAQNVVFLELPKTPSLL 640
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKL 99
QAEDRAHR GQ +V + AK T D+ W + KL
Sbjct: 641 LQAEDRAHRRGQTSAVNVYIFCAKDTMDESNWQNLNKKL 679
>GENEDB_PFALCIPARUM|PF08_0048 [details] [associations]
symbol:PF08_0048 "ATP-dependent helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0016020 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GO:GO:0008026 KO:K01509 EMBL:AL844507
RefSeq:XP_002808863.1 EnsemblProtists:PF08_0048:mRNA GeneID:2655499
KEGG:pfa:PF08_0048 EuPathDB:PlasmoDB:PF3D7_0820000 Uniprot:C0H4W3
Length = 2082
Score = 188 (71.2 bits), Expect = 4.8e-13, P = 4.8e-13
Identities = 40/102 (39%), Positives = 59/102 (57%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
+IR+DGS E+R+ +V +F + + + S + + GI LTAAN+V+F + WNP I
Sbjct: 1811 FIRLDGSTKVEQRQKIVTKFNNDKSIFIFISSTRSGSIGINLTAANVVIFYDTDWNPSID 1870
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWP--LVMTKLD 100
QA DR HRIGQ V + V + T ++ +W L KLD
Sbjct: 1871 KQAMDRCHRIGQTKDVHVFRFVCEYTVEENIWKKQLQKRKLD 1912
>UNIPROTKB|C0H4W3 [details] [associations]
symbol:PF08_0048 "Probable ATP-dependent helicase
PF08_0048" species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0016020
"membrane" evidence=NAS] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016020
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0016568
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
GO:GO:0008026 KO:K01509 EMBL:AL844507 RefSeq:XP_002808863.1
EnsemblProtists:PF08_0048:mRNA GeneID:2655499 KEGG:pfa:PF08_0048
EuPathDB:PlasmoDB:PF3D7_0820000 Uniprot:C0H4W3
Length = 2082
Score = 188 (71.2 bits), Expect = 4.8e-13, P = 4.8e-13
Identities = 40/102 (39%), Positives = 59/102 (57%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
+IR+DGS E+R+ +V +F + + + S + + GI LTAAN+V+F + WNP I
Sbjct: 1811 FIRLDGSTKVEQRQKIVTKFNNDKSIFIFISSTRSGSIGINLTAANVVIFYDTDWNPSID 1870
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWP--LVMTKLD 100
QA DR HRIGQ V + V + T ++ +W L KLD
Sbjct: 1871 KQAMDRCHRIGQTKDVHVFRFVCEYTVEENIWKKQLQKRKLD 1912
>TAIR|locus:2051678 [details] [associations]
symbol:ETL1 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC005936 HOGENOM:HOG000172362
KO:K14439 EMBL:AY059857 EMBL:BT002576 IPI:IPI00520453 PIR:H84432
RefSeq:NP_178318.1 UniGene:At.13358 ProteinModelPortal:Q9ZUL5
SMR:Q9ZUL5 IntAct:Q9ZUL5 PaxDb:Q9ZUL5 PRIDE:Q9ZUL5
EnsemblPlants:AT2G02090.1 GeneID:814740 KEGG:ath:AT2G02090
TAIR:At2g02090 InParanoid:Q9ZUL5 OMA:CAKISAD PhylomeDB:Q9ZUL5
ProtClustDB:CLSN2683669 ArrayExpress:Q9ZUL5 Genevestigator:Q9ZUL5
Uniprot:Q9ZUL5
Length = 763
Score = 182 (69.1 bits), Expect = 5.9e-13, P = 5.9e-13
Identities = 39/99 (39%), Positives = 56/99 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y R+DGS +R+++VD F + +LS A G+ LT A+ V+ ++ +NP I
Sbjct: 631 YRRLDGSTQVTDRQTIVDTFNNDKSIFACLLSTRAGGQGLNLTGADTVIIHDMDFNPQID 690
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKL 99
QAEDR HRIGQ V I LV K T D+ ++ + KL
Sbjct: 691 RQAEDRCHRIGQTKPVTIFRLVTKSTVDENIYEIAKRKL 729
>SGD|S000005717 [details] [associations]
symbol:ULS1 "Protein involved in proteolytic control of
sumoylated substrates" species:4932 "Saccharomyces cerevisiae"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA;IPI] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0007533 "mating type switching" evidence=IMP]
[GO:0006333 "chromatin assembly or disassembly"
evidence=IGI;IMP;IPI] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0032183 "SUMO binding" evidence=IPI] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089
PROSITE:PS51194 SMART:SM00184 SMART:SM00490 SGD:S000005717
Prosite:PS00518 GO:GO:0005739 GO:GO:0005524 GO:GO:0005730
EMBL:BK006948 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 InterPro:IPR017907 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008094 GO:GO:0007533 GeneTree:ENSGT00700000104545
EMBL:Z75099 PIR:S67083 RefSeq:NP_014834.1 ProteinModelPortal:Q08562
SMR:Q08562 DIP:DIP-996N IntAct:Q08562 MINT:MINT-426553
STRING:Q08562 PaxDb:Q08562 EnsemblFungi:YOR191W GeneID:854363
KEGG:sce:YOR191W CYGD:YOR191w HOGENOM:HOG000065999 OMA:NENMNMS
OrthoDB:EOG4NZZ2M NextBio:976476 Genevestigator:Q08562
GermOnline:YOR191W Uniprot:Q08562
Length = 1619
Score = 185 (70.2 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 36/101 (35%), Positives = 61/101 (60%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y++ GS+ ++ R V+++F + + R+ ++S+ A NSG+TLT AN VV + FWNP +
Sbjct: 1489 YLKYIGSMNAQRRSDVINEFYRDPEKRILLISMKAGNSGLTLTCANHVVIVDPFWNPYVE 1548
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
QA+DR +RI Q V + L K + +D + L K ++
Sbjct: 1549 EQAQDRCYRISQTKKVQVHKLFIKDSVEDRISELQKRKKEM 1589
>DICTYBASE|DDB_G0292358 [details] [associations]
symbol:ino80 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0031011 "Ino80 complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
dictyBase:DDB_G0292358 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0003677 GO:GO:0006281 GO:GO:0016887 GO:GO:0006338
GO:GO:0006366 GO:GO:0031011 GO:GO:0004386 EMBL:AAFI02000189
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11665 RefSeq:XP_629681.1 ProteinModelPortal:Q54DG0
STRING:Q54DG0 PRIDE:Q54DG0 EnsemblProtists:DDB0233012
GeneID:8628597 KEGG:ddi:DDB_G0292358 InParanoid:Q54DG0 OMA:MINILED
ProtClustDB:CLSZ2497087 Uniprot:Q54DG0
Length = 2129
Score = 186 (70.5 bits), Expect = 8.1e-13, P = 8.1e-13
Identities = 38/103 (36%), Positives = 59/103 (57%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DGS ++R+ +VD FQ + +LS A GI LT+A+ V+F + WNP +
Sbjct: 1810 YLRLDGSSKLDDRRDMVDDFQSDPSIFAFLLSTRACGIGINLTSADTVIFYDSDWNPTVD 1869
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPS 103
QA+DRAHR+GQ V + L+ K T ++ + K + S
Sbjct: 1870 EQAQDRAHRLGQTRPVTVYRLITKNTIEEKILKRAKQKHQIQS 1912
>ASPGD|ASPL0000047400 [details] [associations]
symbol:AN2285 species:162425 "Emericella nidulans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0042766 "nucleosome
mobilization" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0043486 "histone exchange" evidence=IEA] [GO:0006348 "chromatin
silencing at telomere" evidence=IEA] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043618 "regulation of transcription from RNA
polymerase II promoter in response to stress" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 EMBL:BN001307 GO:GO:0006281
GO:GO:0006351 GO:GO:0016568 GO:GO:0004386 EMBL:AACD01000038
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11665 RefSeq:XP_659889.1 ProteinModelPortal:Q5BAZ5
STRING:Q5BAZ5 EnsemblFungi:CADANIAT00008977 GeneID:2874790
KEGG:ani:AN2285.2 HOGENOM:HOG000048482 OMA:LYFQMTR
OrthoDB:EOG41G6C8 Uniprot:Q5BAZ5
Length = 1612
Score = 183 (69.5 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 40/101 (39%), Positives = 57/101 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y R+DGS E+R+ V FQ V +LS A GI LTAA+ V+F + WNP I
Sbjct: 1364 YCRLDGSTKLEDRRDTVADFQQRPDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTID 1423
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
+QA DRAHR+GQ V + L+ + T ++ + + K +V
Sbjct: 1424 SQAMDRAHRLGQTRQVTVYRLITRSTIEERIRKRALQKEEV 1464
>POMBASE|SPAC25A8.01c [details] [associations]
symbol:fft3 "fun thirty related protein Fft3"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0003677 "DNA binding" evidence=ISM]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IDA] [GO:0032017 "positive regulation of Ran
protein signal transduction" evidence=IGI] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC25A8.01c GO:GO:0005524 EMBL:CU329670
GO:GO:0003677 GO:GO:0006338 GO:GO:0000790 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016585 GO:GO:0008094 OrthoDB:EOG4BCHW4 EMBL:AB027947
PIR:T38371 RefSeq:NP_593617.1 ProteinModelPortal:O42861
STRING:O42861 EnsemblFungi:SPAC25A8.01c.1 GeneID:2541531
KEGG:spo:SPAC25A8.01c HOGENOM:HOG000195581 OMA:NRASERY
NextBio:20802628 GO:GO:0032017 Uniprot:O42861
Length = 922
Score = 180 (68.4 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 36/99 (36%), Positives = 58/99 (58%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
++R DGS + R+ ++DQF ++ V +LS A GI L AN+V+ ++ +NP
Sbjct: 804 FLRFDGSTQVDFRQDLIDQFYADESINVFLLSTKAGGFGINLACANMVILYDVSFNPFDD 863
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKL 99
QAEDRAHR+GQ+ V + V K T ++++ L K+
Sbjct: 864 LQAEDRAHRVGQKKEVTVYKFVVKDTIEEHIQRLANAKI 902
>UNIPROTKB|I3LB74 [details] [associations]
symbol:I3LB74 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 GeneTree:ENSGT00700000104545
Ensembl:ENSSSCT00000030133 Uniprot:I3LB74
Length = 142
Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 35/105 (33%), Positives = 56/105 (53%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y IDGSV ++R +V+ F +V ++S+ A G+ LT N + ++ WNP +
Sbjct: 16 YATIDGSVNPKQRMDLVEAFNSSGGPQVMLISLLAGGVGLNLTGGNHLFLLDMHWNPSLE 75
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA DR +R+GQQ V+I V + T ++ + L K D+ I
Sbjct: 76 DQASDRIYRVGQQKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQI 120
>ASPGD|ASPL0000018137 [details] [associations]
symbol:AN4187 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005576
"extracellular region" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 EMBL:BN001302
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 HOGENOM:HOG000210415 KO:K15192 OMA:TKQEGAI
InterPro:IPR022707 Pfam:PF12054 EMBL:AACD01000068 OrthoDB:EOG44XNQZ
RefSeq:XP_661791.1 ProteinModelPortal:Q5B5J3 STRING:Q5B5J3
EnsemblFungi:CADANIAT00004481 GeneID:2873610 KEGG:ani:AN4187.2
Uniprot:Q5B5J3
Length = 1904
Score = 183 (69.5 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 37/105 (35%), Positives = 63/105 (60%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
++R+DG+V + R+ +V++F + + V +L+ + G+ LT A+ V+F E WNP
Sbjct: 1715 FLRLDGAVEATRRQDIVNRFNSDPSYDVLLLTTSVGGLGLNLTGADTVIFVEHDWNPQKD 1774
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA DRAHRIGQ+ V + L+ + T ++ + L K+DV S +
Sbjct: 1775 IQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVASTV 1819
>POMBASE|SPAC11E3.01c [details] [associations]
symbol:swr1 "SNF2 family helicase Swr1" species:4896
"Schizosaccharomyces pombe" [GO:0000812 "Swr1 complex"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISM] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IPI] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043486 "histone exchange" evidence=ISO] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC11E3.01c GO:GO:0005524
EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006351 GO:GO:0000812 GO:GO:0004003 GO:GO:0043486
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 PROSITE:PS51204 KO:K11681 HOGENOM:HOG000186095
OrthoDB:EOG49S9FK PIR:T37528 RefSeq:XP_001713118.1
ProteinModelPortal:O13682 STRING:O13682 EnsemblFungi:SPAC11E3.01c.1
GeneID:3361561 KEGG:spo:SPAC11E3.01c OMA:VKNEREG NextBio:20811602
Uniprot:O13682
Length = 1288
Score = 181 (68.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 35/88 (39%), Positives = 56/88 (63%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DG+ E+R+ + ++F +DK V +LS + GI LT A+ V+F + WNP +
Sbjct: 1034 YLRLDGATKIEQRQILTERFNNDDKIPVFILSTRSGGLGINLTGADTVIFYDSDWNPQLD 1093
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTAD 88
QA+DR+HRIGQ V I L+++ T +
Sbjct: 1094 AQAQDRSHRIGQTRDVHIYRLISEYTVE 1121
>POMBASE|SPAC29B12.01 [details] [associations]
symbol:ino80 "SNF2 family helicase Ino80" species:4896
"Schizosaccharomyces pombe" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=ISO] [GO:0006338 "chromatin remodeling" evidence=IPI]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IDA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 PomBase:SPAC29B12.01 GO:GO:0005524
EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006281 GO:GO:0006351 GO:GO:0016568 GO:GO:0031011 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043140 KO:K11665 HOGENOM:HOG000048482 OrthoDB:EOG41G6C8
RefSeq:NP_001018299.1 ProteinModelPortal:O14148 STRING:O14148
EnsemblFungi:SPAC29B12.01.1 GeneID:3361566 KEGG:spo:SPAC29B12.01
OMA:INDHNSA NextBio:20811604 Uniprot:O14148
Length = 1604
Score = 181 (68.8 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 37/89 (41%), Positives = 55/89 (61%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DGS +R+ +V ++Q + V +LS A GI LTAA+ V+F + WNP I
Sbjct: 1472 YLRLDGSSKISQRRDMVTEWQTRPELFVFLLSTRAGGLGINLTAADTVIFYDSDWNPSID 1531
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADD 89
+QA DRAHRIGQQ V + + + T ++
Sbjct: 1532 SQAMDRAHRIGQQKQVTVYRFITRGTIEE 1560
>ASPGD|ASPL0000037473 [details] [associations]
symbol:AN2973 species:162425 "Emericella nidulans"
[GO:0000729 "DNA double-strand break processing" evidence=IEA]
[GO:0070870 "heterochromatin maintenance involved in chromatin
silencing" evidence=IEA] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0000183 "chromatin
silencing at rDNA" evidence=IEA] [GO:0070869 "heterochromatin
assembly involved in chromatin silencing" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031934 "mating-type region heterochromatin" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000775 "chromosome,
centromeric region" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 EMBL:BN001306 EMBL:AACD01000051
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 OrthoDB:EOG4BCHW4 KO:K14439 HOGENOM:HOG000195581
RefSeq:XP_660577.1 ProteinModelPortal:Q5B907
EnsemblFungi:CADANIAT00010107 GeneID:2874181 KEGG:ani:AN2973.2
OMA:QQVGINW Uniprot:Q5B907
Length = 1107
Score = 179 (68.1 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 38/99 (38%), Positives = 58/99 (58%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
++R+DG+ E+R+S++D F V +LS A +GI L AN V+ + +NP
Sbjct: 969 FVRLDGTTSVEDRQSIMDTFHENTDIPVFLLSTKAGGAGINLACANKVIIFDSSFNPQED 1028
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKL 99
QAE+RAHR+GQ V + LV K T ++ ++ L TKL
Sbjct: 1029 VQAENRAHRVGQTREVEVIRLVTKDTIEEQIYALGQTKL 1067
>RGD|1310969 [details] [associations]
symbol:Ino80 "INO80 homolog (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0000070 "mitotic sister chromatid
segregation" evidence=ISO] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA;ISO] [GO:0003678 "DNA helicase activity"
evidence=ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006302 "double-strand break repair" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0010571 "positive
regulation of DNA replication involved in S phase" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0030307 "positive
regulation of cell growth" evidence=ISO] [GO:0031011 "Ino80
complex" evidence=ISO] [GO:0032508 "DNA duplex unwinding"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043014 "alpha-tubulin binding" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0070914 "UV-damage excision repair" evidence=ISO]
[GO:0071479 "cellular response to ionizing radiation" evidence=ISO]
[GO:2000045 "regulation of G1/S transition of mitotic cell cycle"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 RGD:1310969
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00680000100052
IPI:IPI00569811 Ensembl:ENSRNOT00000031672 UCSC:RGD:1310969
Uniprot:D4A6Q6
Length = 1553
Score = 180 (68.4 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 39/101 (38%), Positives = 57/101 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DGS ER+ +V FQ + V +LS A GI LTAA+ V+F + WNP +
Sbjct: 1141 YMRLDGSSKISERRDMVADFQTRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVD 1200
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
QA DRAHR+GQ V + L+ K T ++ + K ++
Sbjct: 1201 QQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEI 1241
>UNIPROTKB|Q9ULG1 [details] [associations]
symbol:INO80 "DNA helicase INO80" species:9606 "Homo
sapiens" [GO:0003779 "actin binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0031011 "Ino80 complex" evidence=IDA] [GO:0034644 "cellular
response to UV" evidence=IMP] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IMP] [GO:0070914
"UV-damage excision repair" evidence=IMP] [GO:0071479 "cellular
response to ionizing radiation" evidence=IMP] [GO:0006302
"double-strand break repair" evidence=IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0030307 "positive regulation of cell growth"
evidence=IMP] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IMP] [GO:0010571 "positive regulation of DNA
replication involved in S phase" evidence=IMP] [GO:0043014
"alpha-tubulin binding" evidence=IMP] [GO:0051225 "spindle
assembly" evidence=IMP] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0032508 "DNA duplex unwinding" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF13892 PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
GO:GO:0005524 GO:GO:0030307 GO:GO:0051301 GO:GO:0051225
GO:GO:0003677 GO:GO:0045944 GO:GO:0016887 GO:GO:0006338
GO:GO:0000070 GO:GO:0031011 GO:GO:0000724 GO:GO:0034644
GO:GO:0005874 GO:GO:0071479 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043014
GO:GO:0003678 GO:GO:0070914 GO:GO:2000045 EMBL:CH471125
GO:GO:0010571 KO:K11665 CTD:54617 ChiTaRS:INO80 EMBL:AB033085
EMBL:BC146785 EMBL:AL137280 IPI:IPI00008091 PIR:T46350
RefSeq:NP_060023.1 UniGene:Hs.292949 ProteinModelPortal:Q9ULG1
SMR:Q9ULG1 DIP:DIP-34296N IntAct:Q9ULG1 STRING:Q9ULG1
PhosphoSite:Q9ULG1 DMDM:114149322 PaxDb:Q9ULG1 PRIDE:Q9ULG1
Ensembl:ENST00000361937 Ensembl:ENST00000401393 GeneID:54617
KEGG:hsa:54617 UCSC:uc001zni.3 GeneCards:GC15M041271
HGNC:HGNC:26956 MIM:610169 neXtProt:NX_Q9ULG1 PharmGKB:PA162392040
HOGENOM:HOG000231795 HOVERGEN:HBG057875 InParanoid:Q9ULG1
OMA:KVIRKFW OrthoDB:EOG4ZKJKF GenomeRNAi:54617 NextBio:57137
ArrayExpress:Q9ULG1 Bgee:Q9ULG1 CleanEx:HS_INO80
Genevestigator:Q9ULG1 GermOnline:ENSG00000128908 Uniprot:Q9ULG1
Length = 1556
Score = 180 (68.4 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 39/101 (38%), Positives = 57/101 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DGS ER+ +V FQ + V +LS A GI LTAA+ V+F + WNP +
Sbjct: 1144 YMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVD 1203
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
QA DRAHR+GQ V + L+ K T ++ + K ++
Sbjct: 1204 QQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEI 1244
>MGI|MGI:1915392 [details] [associations]
symbol:Ino80 "INO80 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000070 "mitotic sister chromatid segregation"
evidence=ISO] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003678
"DNA helicase activity" evidence=ISO] [GO:0003779 "actin binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005874 "microtubule" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0010571 "positive regulation of DNA replication involved in S
phase" evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0030307 "positive regulation of cell growth" evidence=ISO]
[GO:0031011 "Ino80 complex" evidence=ISO] [GO:0032508 "DNA duplex
unwinding" evidence=ISO] [GO:0034644 "cellular response to UV"
evidence=ISO] [GO:0043014 "alpha-tubulin binding" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051225 "spindle
assembly" evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
[GO:0070914 "UV-damage excision repair" evidence=ISO] [GO:0071479
"cellular response to ionizing radiation" evidence=ISO] [GO:2000045
"regulation of G1/S transition of mitotic cell cycle" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 MGI:MGI:1915392 GO:GO:0005524
GO:GO:0005634 GO:GO:0030307 GO:GO:0051301 GO:GO:0051225
GO:GO:0003677 GO:GO:0045944 GO:GO:0016887 GO:GO:0006338
GO:GO:0000070 GO:GO:0031011 GO:GO:0000724 GO:GO:0034644
GO:GO:0005874 GO:GO:0071479 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0070914 GO:GO:2000045 GO:GO:0010571 EMBL:AL844862 KO:K11665
CTD:54617 GeneTree:ENSGT00680000100052 HOGENOM:HOG000231795
HOVERGEN:HBG057875 OMA:KVIRKFW OrthoDB:EOG4ZKJKF EMBL:AK040612
EMBL:AK129317 EMBL:BC059235 IPI:IPI00378561 IPI:IPI00785415
RefSeq:NP_080850.2 UniGene:Mm.330496 ProteinModelPortal:Q6ZPV2
SMR:Q6ZPV2 IntAct:Q6ZPV2 STRING:Q6ZPV2 PhosphoSite:Q6ZPV2
PaxDb:Q6ZPV2 PRIDE:Q6ZPV2 Ensembl:ENSMUST00000049920
Ensembl:ENSMUST00000110808 GeneID:68142 KEGG:mmu:68142
InParanoid:Q6ZPV2 NextBio:326516 Bgee:Q6ZPV2 Genevestigator:Q6ZPV2
GermOnline:ENSMUSG00000034154 Uniprot:Q6ZPV2
Length = 1559
Score = 180 (68.4 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 39/101 (38%), Positives = 57/101 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DGS ER+ +V FQ + V +LS A GI LTAA+ V+F + WNP +
Sbjct: 1147 YMRLDGSSKISERRDMVADFQTRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVD 1206
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
QA DRAHR+GQ V + L+ K T ++ + K ++
Sbjct: 1207 QQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEI 1247
>UNIPROTKB|F1PKX5 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000045 "regulation of G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0071479 "cellular response to
ionizing radiation" evidence=IEA] [GO:0070914 "UV-damage excision
repair" evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:AAEX03016071 RefSeq:XP_849183.1
Ensembl:ENSCAFT00000015097 GeneID:478262 KEGG:cfa:478262
Uniprot:F1PKX5
Length = 1560
Score = 180 (68.4 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 39/101 (38%), Positives = 57/101 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DGS ER+ +V FQ + V +LS A GI LTAA+ V+F + WNP +
Sbjct: 1148 YMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVD 1207
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
QA DRAHR+GQ V + L+ K T ++ + K ++
Sbjct: 1208 QQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEI 1248
>UNIPROTKB|F1NYY9 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0010571 "positive
regulation of DNA replication involved in S phase" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0030307 "positive
regulation of cell growth" evidence=IEA] [GO:0031011 "Ino80
complex" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0043014 "alpha-tubulin binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051225 "spindle
assembly" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0071479 "cellular response to ionizing radiation"
evidence=IEA] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003678 "DNA helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 GO:GO:0005524
GO:GO:0030307 GO:GO:0051225 GO:GO:0003677 GO:GO:0045944
GO:GO:0016887 GO:GO:0006338 GO:GO:0000070 GO:GO:0031011
GO:GO:0000724 GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914
GO:GO:2000045 GO:GO:0010571 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:AADN02033529 EMBL:AADN02033530 IPI:IPI00604387
Ensembl:ENSGALT00000013933 Uniprot:F1NYY9
Length = 1564
Score = 180 (68.4 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 39/101 (38%), Positives = 57/101 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DGS ER+ +V FQ + V +LS A GI LTAA+ V+F + WNP +
Sbjct: 1152 YMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVD 1211
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
QA DRAHR+GQ V + L+ K T ++ + K ++
Sbjct: 1212 QQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEI 1252
>UNIPROTKB|E1BAN8 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000045 "regulation of G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:DAAA02028556 EMBL:DAAA02028557 IPI:IPI00685860
RefSeq:NP_001192313.1 UniGene:Bt.55708 Ensembl:ENSBTAT00000013708
GeneID:505992 KEGG:bta:505992 NextBio:20867400 Uniprot:E1BAN8
Length = 1566
Score = 180 (68.4 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 39/101 (38%), Positives = 57/101 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DGS ER+ +V FQ + V +LS A GI LTAA+ V+F + WNP +
Sbjct: 1154 YMRLDGSSKISERRDMVADFQTRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVD 1213
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
QA DRAHR+GQ V + L+ K T ++ + K ++
Sbjct: 1214 QQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEI 1254
>UNIPROTKB|F1SSV0 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000045 "regulation of G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:FP015925 RefSeq:XP_003121636.1 UniGene:Ssc.45003
Ensembl:ENSSSCT00000005252 GeneID:100517567 KEGG:ssc:100517567
Uniprot:F1SSV0
Length = 1566
Score = 180 (68.4 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 39/101 (38%), Positives = 57/101 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DGS ER+ +V FQ + V +LS A GI LTAA+ V+F + WNP +
Sbjct: 1154 YMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVD 1213
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
QA DRAHR+GQ V + L+ K T ++ + K ++
Sbjct: 1214 QQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEI 1254
>UNIPROTKB|B4E0W6 [details] [associations]
symbol:BTAF1 "TATA-binding protein-associated factor 172"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 UniGene:Hs.500526 HGNC:HGNC:17307
EMBL:AL365398 EMBL:AL359198 EMBL:AK303554 IPI:IPI01015564
SMR:B4E0W6 STRING:B4E0W6 Ensembl:ENST00000544642 HOVERGEN:HBG104002
Uniprot:B4E0W6
Length = 677
Score = 174 (66.3 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 37/105 (35%), Positives = 60/105 (57%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DGS+ +R S+V +F + V +L+ G+ LT A+ VVF E WNP
Sbjct: 502 YLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRD 561
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA DRAHRIGQ+ V + L+ + T ++ + L K+++ + +
Sbjct: 562 LQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTV 606
>ASPGD|ASPL0000030172 [details] [associations]
symbol:AN5483 species:162425 "Emericella nidulans"
[GO:0045005 "maintenance of fidelity involved in DNA-dependent DNA
replication" evidence=IEA] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 EMBL:BN001305 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACD01000094 OrthoDB:EOG4NZZ2M
RefSeq:XP_663087.1 ProteinModelPortal:Q5B1U7
EnsemblFungi:CADANIAT00003605 GeneID:2871773 KEGG:ani:AN5483.2
HOGENOM:HOG000216663 OMA:LETIRPD Uniprot:Q5B1U7
Length = 1184
Score = 177 (67.4 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 37/89 (41%), Positives = 53/89 (59%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y R DGS+ +R S V F + +V ++S+ A NSG+ L AAN V+ + FWNP +
Sbjct: 1047 YRRYDGSMKPADRNSAVLDFTDDPSCKVMLVSLKAGNSGLNLVAANHVIIFDPFWNPYVE 1106
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADD 89
QA DRAHRIGQ V + ++ +T +D
Sbjct: 1107 EQAVDRAHRIGQLREVHVHRILVPETVED 1135
>ZFIN|ZDB-GENE-041014-72 [details] [associations]
symbol:ino80 "INO80 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
ZFIN:ZDB-GENE-041014-72 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:BX897725
HOGENOM:HOG000231795 HOVERGEN:HBG057875 OMA:KVIRKFW IPI:IPI00516098
UniGene:Dr.84310 ProteinModelPortal:Q5RGG8 STRING:Q5RGG8
InParanoid:Q5RGG8 Uniprot:Q5RGG8
Length = 1582
Score = 178 (67.7 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 39/101 (38%), Positives = 56/101 (55%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DGS ER+ +V FQ V +LS A GI LTAA+ V+F + WNP +
Sbjct: 1175 YMRLDGSSKISERRDMVADFQSRTDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVD 1234
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
QA DRAHR+GQ V + L+ K T ++ + K ++
Sbjct: 1235 QQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEI 1275
>WB|WBGene00007027 [details] [associations]
symbol:ssl-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0003677 GO:GO:0040011 GO:GO:0016568 GO:GO:0040035
GO:GO:0004386 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427 KO:K11320
EMBL:AL132904 EMBL:AY551965 RefSeq:NP_001255179.1
RefSeq:NP_001255180.1 RefSeq:NP_001255181.1 RefSeq:NP_001255182.1
UniGene:Cel.203 ProteinModelPortal:Q9NEL2 SMR:Q9NEL2
MINT:MINT-3384018 PaxDb:Q9NEL2 EnsemblMetazoa:Y111B2A.22a
GeneID:190954 KEGG:cel:CELE_Y111B2A.22 UCSC:Y111B2A.22 CTD:190954
WormBase:Y111B2A.22a WormBase:Y111B2A.22b WormBase:Y111B2A.22c
WormBase:Y111B2A.22d InParanoid:Q9NEL2 OMA:HLACSES NextBio:947488
ArrayExpress:Q9NEL2 Uniprot:Q9NEL2
Length = 2395
Score = 179 (68.1 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 33/89 (37%), Positives = 58/89 (65%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y R+DG+ G E+R++++++F + K +LS + G+ LT A+ V+F + WNP +
Sbjct: 1231 YFRLDGTTGVEQRQAMMERFNADPKVFCFILSTRSGGVGVNLTGADTVIFYDSDWNPTMD 1290
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADD 89
QA+DR HRIGQ +V I L++++T ++
Sbjct: 1291 AQAQDRCHRIGQTRNVSIYRLISERTIEE 1319
>DICTYBASE|DDB_G0286219 [details] [associations]
symbol:DDB_G0286219 "putative TBP-associated factor"
species:44689 "Dictyostelium discoideum" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR016024
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0286219 GO:GO:0005524 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 InterPro:IPR021133
PROSITE:PS50077 GO:GO:0003677 EMBL:AAFI02000085 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K15192 OMA:TKQEGAI InterPro:IPR022707 Pfam:PF12054
RefSeq:XP_637789.1 ProteinModelPortal:Q54M42 STRING:Q54M42
PRIDE:Q54M42 EnsemblProtists:DDB0233434 GeneID:8625503
KEGG:ddi:DDB_G0286219 InParanoid:Q54M42 ProtClustDB:CLSZ2430112
Uniprot:Q54M42
Length = 2005
Score = 178 (67.7 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 39/105 (37%), Positives = 61/105 (58%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DGSV + +R S+V+QF + V +L+ G+ LT A+ V+F E WNP
Sbjct: 1809 YLRMDGSVETMKRHSIVNQFNSDPTIDVLLLTTHVGGLGLNLTGADTVIFLEHDWNPMKD 1868
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA DRAHRIGQ+ V + L+ T ++ + L KL++ + +
Sbjct: 1869 LQAMDRAHRIGQKKVVNVYRLITSGTLEEKIMGLQKFKLNIANTV 1913
>CGD|CAL0002614 [details] [associations]
symbol:orf19.4502 species:5476 "Candida albicans" [GO:0000228
"nuclear chromosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0017025 "TBP-class protein binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0045898 "regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0042790 "transcription of nuclear large rRNA transcript from
RNA polymerase I promoter" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 CGD:CAL0002614 GO:GO:0005524 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K15192 InterPro:IPR022707 Pfam:PF12054 EMBL:AACQ01000142
EMBL:AACQ01000141 RefSeq:XP_712896.1 RefSeq:XP_712928.1
ProteinModelPortal:Q59TC9 STRING:Q59TC9 GeneID:3645462
GeneID:3645500 KEGG:cal:CaO19.11978 KEGG:cal:CaO19.4502
Uniprot:Q59TC9
Length = 1915
Score = 177 (67.4 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 37/105 (35%), Positives = 60/105 (57%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
++R+DGS +R+S+V +F + V +L+ G+ LT A+ V+F E WNP
Sbjct: 1716 FMRLDGSTDPRDRQSIVRKFNEDPSIDVLLLTTKVGGLGLNLTGADTVIFVEHDWNPMND 1775
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA DRAHR+GQ+ V + L+ K T ++ + L K+++ S I
Sbjct: 1776 LQAMDRAHRLGQKKVVNVYRLITKDTLEEKIMGLQKFKMNIASTI 1820
>DICTYBASE|DDB_G0293012 [details] [associations]
symbol:DDB_G0293012 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR000626
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00213 SMART:SM00298
SMART:SM00490 dictyBase:DDB_G0293012 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006357 GO:GO:0004003
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
EMBL:AAFI02000199 InterPro:IPR022617 Pfam:PF11976
RefSeq:XP_629261.1 ProteinModelPortal:Q54CF8
EnsemblProtists:DDB0220643 GeneID:8628981 KEGG:ddi:DDB_G0293012
InParanoid:Q54CF8 OMA:IMINEDI Uniprot:Q54CF8
Length = 3071
Score = 179 (68.1 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 40/100 (40%), Positives = 60/100 (60%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFR-VAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y R+DGS+ SE R++ +D+FQ + R V +LS A GI LT A+ V+ + WNP
Sbjct: 1253 YERLDGSIKSEVRQASIDRFQDKGANRFVFLLSTRAGGVGINLTTADTVILFDSDWNPQS 1312
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKL 99
QA+ R HRIGQ ++V + L+ + T ++YL+ KL
Sbjct: 1313 DLQAQARCHRIGQTNNVKVYRLITRNTYEEYLFECATKKL 1352
>UNIPROTKB|F1NHJ5 [details] [associations]
symbol:BTAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000357
InterPro:IPR001650 InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271
Pfam:PF02985 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
InterPro:IPR021133 PROSITE:PS50077 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 OMA:TKQEGAI
InterPro:IPR022707 Pfam:PF12054 GeneTree:ENSGT00630000089754
EMBL:AADN02046597 IPI:IPI00572097 Ensembl:ENSGALT00000011235
Uniprot:F1NHJ5
Length = 1845
Score = 176 (67.0 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 37/105 (35%), Positives = 61/105 (58%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DGS+ + +R S+V +F + V +L+ G+ LT A+ VVF E WNP
Sbjct: 1668 YLRLDGSIPAGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRD 1727
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA DRAHRIGQ+ V + L+ + T ++ + L K+++ + +
Sbjct: 1728 LQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTV 1772
>CGD|CAL0000831 [details] [associations]
symbol:orf19.1734 species:5476 "Candida albicans" [GO:0031011
"Ino80 complex" evidence=IEA] [GO:0042766 "nucleosome mobilization"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0043486
"histone exchange" evidence=IEA] [GO:0006348 "chromatin silencing
at telomere" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043618 "regulation of transcription from RNA polymerase II
promoter in response to stress" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF13892 PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
CGD:CAL0000831 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006281 GO:GO:0006351 GO:GO:0016568
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000298 EMBL:AACQ01000297
RefSeq:XP_710247.1 RefSeq:XP_710254.1 STRING:Q59KI4 GeneID:3648140
GeneID:3648148 KEGG:cal:CaO19.1734 KEGG:cal:CaO19.9302 KO:K11665
Uniprot:Q59KI4
Length = 1387
Score = 174 (66.3 bits), Expect = 9.3e-12, P = 9.3e-12
Identities = 37/88 (42%), Positives = 53/88 (60%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
YIR+DGS E R+ +V +Q + + +LS A G+ LT+A+ V+F + WNP I
Sbjct: 1279 YIRLDGSTTIESRREMVQAWQTNPEIFIFMLSTRAGGLGLNLTSADTVIFYDSDWNPTID 1338
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTAD 88
+QA DRAHRIGQ V + LV + T +
Sbjct: 1339 SQAMDRAHRIGQTKQVKVFRLVTRNTIE 1366
>UNIPROTKB|J9P9W7 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00271 PROSITE:PS51194 SMART:SM00384 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929
GO:GO:0004386 GeneTree:ENSGT00530000063427 EMBL:AAEX03004381
EMBL:AAEX03004385 EMBL:AAEX03004386 EMBL:AAEX03004382
EMBL:AAEX03004383 EMBL:AAEX03004384 EMBL:AAEX03004387
EMBL:AAEX03004388 Ensembl:ENSCAFT00000045283 OMA:PATANNS
Uniprot:J9P9W7
Length = 1470
Score = 174 (66.3 bits), Expect = 9.9e-12, P = 9.9e-12
Identities = 33/89 (37%), Positives = 57/89 (64%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DGS E+R++++++F + + +LS + G+ LT A+ VVF + WNP +
Sbjct: 329 YLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMD 388
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADD 89
QA+DR HRIGQ V I L++++T ++
Sbjct: 389 AQAQDRCHRIGQTRDVHIYRLISERTVEE 417
>ASPGD|ASPL0000061821 [details] [associations]
symbol:AN10043 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:BN001308 GO:GO:0003677
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EnsemblFungi:CADANIAT00002546 HOGENOM:HOG000175622 OMA:MEIEESV
Uniprot:C8VUX5
Length = 648
Score = 169 (64.5 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 36/91 (39%), Positives = 53/91 (58%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y R+DGS S R V FQ + ++ V +LS A G+ L ++++V+F + WNP ++
Sbjct: 379 YGRLDGSTSSAWRNLSVFLFQNDPRYMVFLLSTRAGGEGLNLVSSSIVIFLDDDWNPQVM 438
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYL 91
QAE R HRIGQ V I + AK T +D +
Sbjct: 439 RQAESRVHRIGQTQPVQIFRIHAKGTVEDQM 469
>UNIPROTKB|I3LD21 [details] [associations]
symbol:I3LD21 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0003677 GO:GO:0004386 InterPro:IPR022707
Pfam:PF12054 GeneTree:ENSGT00630000089754
Ensembl:ENSSSCT00000029375 Uniprot:I3LD21
Length = 1845
Score = 174 (66.3 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 37/105 (35%), Positives = 60/105 (57%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DGS+ +R S+V +F + V +L+ G+ LT A+ VVF E WNP
Sbjct: 1670 YLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRD 1729
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA DRAHRIGQ+ V + L+ + T ++ + L K+++ + +
Sbjct: 1730 LQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTV 1774
>RGD|1564130 [details] [associations]
symbol:Btaf1 "BTAF1 RNA polymerase II, B-TFIID transcription
factor-associated, (Mot1 homolog, S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 RGD:1564130 GO:GO:0005524 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR022707
Pfam:PF12054 GeneTree:ENSGT00630000089754 EMBL:AC096310
IPI:IPI00370629 PRIDE:F1LW16 Ensembl:ENSRNOT00000024465
Uniprot:F1LW16
Length = 1848
Score = 174 (66.3 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 37/105 (35%), Positives = 60/105 (57%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DGS+ +R S+V +F + V +L+ G+ LT A+ VVF E WNP
Sbjct: 1673 YLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRD 1732
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA DRAHRIGQ+ V + L+ + T ++ + L K+++ + +
Sbjct: 1733 LQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTV 1777
>UNIPROTKB|O14981 [details] [associations]
symbol:BTAF1 "TATA-binding protein-associated factor 172"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0005634 "nucleus"
evidence=NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0045892 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0003677 GO:GO:0003700 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AJ001017 EMBL:AF038362 EMBL:AF166118 IPI:IPI00024802
RefSeq:NP_003963.1 UniGene:Hs.500526 ProteinModelPortal:O14981
SMR:O14981 IntAct:O14981 MINT:MINT-2795412 STRING:O14981
PhosphoSite:O14981 PaxDb:O14981 PeptideAtlas:O14981 PRIDE:O14981
Ensembl:ENST00000265990 GeneID:9044 KEGG:hsa:9044 UCSC:uc001khr.3
CTD:9044 GeneCards:GC10P093673 HGNC:HGNC:17307 HPA:HPA042274
MIM:605191 neXtProt:NX_O14981 PharmGKB:PA25437 HOGENOM:HOG000210415
HOVERGEN:HBG017883 InParanoid:O14981 KO:K15192 OMA:TKQEGAI
OrthoDB:EOG4W0XC6 PhylomeDB:O14981 GenomeRNAi:9044 NextBio:33875
ArrayExpress:O14981 Bgee:O14981 CleanEx:HS_BTAF1
Genevestigator:O14981 GermOnline:ENSG00000095564 InterPro:IPR022707
Pfam:PF12054 Uniprot:O14981
Length = 1849
Score = 174 (66.3 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 37/105 (35%), Positives = 60/105 (57%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DGS+ +R S+V +F + V +L+ G+ LT A+ VVF E WNP
Sbjct: 1674 YLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRD 1733
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA DRAHRIGQ+ V + L+ + T ++ + L K+++ + +
Sbjct: 1734 LQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTV 1778
>UNIPROTKB|F1SCA0 [details] [associations]
symbol:BTAF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 OMA:TKQEGAI InterPro:IPR022707
Pfam:PF12054 GeneTree:ENSGT00630000089754 EMBL:CT868714
EMBL:CT954286 Ensembl:ENSSSCT00000011455 Uniprot:F1SCA0
Length = 1850
Score = 174 (66.3 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 37/105 (35%), Positives = 60/105 (57%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DGS+ +R S+V +F + V +L+ G+ LT A+ VVF E WNP
Sbjct: 1675 YLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRD 1734
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA DRAHRIGQ+ V + L+ + T ++ + L K+++ + +
Sbjct: 1735 LQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTV 1779
>UNIPROTKB|I3LTQ1 [details] [associations]
symbol:I3LTQ1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0003677 GO:GO:0004386 InterPro:IPR022707
Pfam:PF12054 GeneTree:ENSGT00630000089754
Ensembl:ENSSSCT00000027675 OMA:ISESSME Uniprot:I3LTQ1
Length = 1850
Score = 174 (66.3 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 37/105 (35%), Positives = 60/105 (57%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DGS+ +R S+V +F + V +L+ G+ LT A+ VVF E WNP
Sbjct: 1675 YLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRD 1734
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA DRAHRIGQ+ V + L+ + T ++ + L K+++ + +
Sbjct: 1735 LQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTV 1779
>UNIPROTKB|E2QWL4 [details] [associations]
symbol:BTAF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 OMA:TKQEGAI InterPro:IPR022707
Pfam:PF12054 GeneTree:ENSGT00630000089754 EMBL:AAEX03015408
Ensembl:ENSCAFT00000011817 NextBio:20860516 Uniprot:E2QWL4
Length = 1879
Score = 174 (66.3 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 37/105 (35%), Positives = 60/105 (57%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DGS+ +R S+V +F + V +L+ G+ LT A+ VVF E WNP
Sbjct: 1674 YLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRD 1733
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA DRAHRIGQ+ V + L+ + T ++ + L K+++ + +
Sbjct: 1734 LQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTV 1778
>POMBASE|SPBC23E6.02 [details] [associations]
symbol:rrp2 "ATP-dependent DNA helicase (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IGI]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISM] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISM] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006281 "DNA repair"
evidence=ISO] [GO:0006338 "chromatin remodeling" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0045005 "maintenance of fidelity
involved in DNA-dependent DNA replication" evidence=IMP]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00490 PomBase:SPBC23E6.02 Prosite:PS00518
GO:GO:0005524 GO:GO:0046872 GO:GO:0003677 EMBL:CU329671
GO:GO:0008270 GO:GO:0006338 GO:GO:0000790 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004003 GO:GO:0000724 GO:GO:0004842
InterPro:IPR017907 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0045005
OrthoDB:EOG4NZZ2M PIR:T39936 RefSeq:NP_596602.1
ProteinModelPortal:O60177 STRING:O60177 EnsemblFungi:SPBC23E6.02.1
GeneID:2540464 KEGG:spo:SPBC23E6.02 OMA:ACCHSYL NextBio:20801591
Uniprot:O60177
Length = 1040
Score = 171 (65.3 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 35/89 (39%), Positives = 50/89 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+ G + + ER + F+ + RV ++S+ A N G+ LT AN V+ + FWNP I
Sbjct: 910 YLMYTGGLSTAERNQALINFEVDPNVRVLLISLKAGNVGLNLTCANHVIILDPFWNPYIE 969
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADD 89
QA DRAHRIGQ V I +V T ++
Sbjct: 970 EQAVDRAHRIGQDKPVNILRIVTNNTIEE 998
>CGD|CAL0000717 [details] [associations]
symbol:orf19.5675 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0032183 "SUMO binding" evidence=IEA] [GO:0006333 "chromatin
assembly or disassembly" evidence=IEA] [GO:0007533 "mating type
switching" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089
PROSITE:PS51194 SMART:SM00184 SMART:SM00490 CGD:CAL0000717
GO:GO:0005524 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000129
EMBL:AACQ01000128 RefSeq:XP_713356.1 RefSeq:XP_713403.1
ProteinModelPortal:Q59UP5 GeneID:3644990 GeneID:3645010
KEGG:cal:CaO19.13120 KEGG:cal:CaO19.5675 Uniprot:Q59UP5
Length = 1102
Score = 171 (65.3 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 35/98 (35%), Positives = 58/98 (59%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
++R DG++ + + +V+ +F Y+ V +LS+ A N+G+TLT AN V + FWNP +
Sbjct: 971 FLRYDGTMSMDVKNNVIKEF-YQSSKNVLLLSLRAGNAGLTLTCANHVFIMDPFWNPFVE 1029
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTK 98
QA RAHRIGQ V + ++ T ++ + L +K
Sbjct: 1030 EQAMGRAHRIGQTREVFVHRVLIAGTVENRIMELQESK 1067
>SGD|S000001388 [details] [associations]
symbol:STH1 "ATPase component of the RSC chromatin remodeling
complex" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0007126 "meiosis" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA;IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;IMP] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0006337 "nucleosome
disassembly" evidence=IDA] [GO:0016584 "nucleosome positioning"
evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=IGI;IMP] [GO:0031055 "chromatin remodeling at centromere"
evidence=IMP] [GO:0007059 "chromosome segregation" evidence=IGI]
[GO:0016586 "RSC complex" evidence=IDA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IDA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IMP] [GO:0015616 "DNA translocase activity" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SGD:S000001388 GO:GO:0005524 GO:GO:0007126 GO:GO:0000086
GO:GO:0007010 GO:GO:0007059 GO:GO:0000775 GO:GO:0006355
EMBL:BK006942 GO:GO:0006302 GO:GO:0004386 GO:GO:0006368
GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016586 GO:GO:0043044 GO:GO:0016584
EMBL:DQ115392 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
GO:GO:0070577 InterPro:IPR018359 EMBL:Z46833 InterPro:IPR014012
PROSITE:PS51204 GeneTree:ENSGT00670000098110 HOGENOM:HOG000172362
GO:GO:0015616 GO:GO:0031055 KO:K11786 OrthoDB:EOG4D565R EMBL:D10595
EMBL:M83755 PIR:S49883 RefSeq:NP_012140.1 ProteinModelPortal:P32597
SMR:P32597 DIP:DIP-5889N IntAct:P32597 MINT:MINT-615490
STRING:P32597 PaxDb:P32597 PeptideAtlas:P32597 EnsemblFungi:YIL126W
GeneID:854680 KEGG:sce:YIL126W CYGD:YIL126w OMA:MEDFLRM
NextBio:977286 Genevestigator:P32597 GermOnline:YIL126W
Uniprot:P32597
Length = 1359
Score = 172 (65.6 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 37/106 (34%), Positives = 59/106 (55%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDK-FRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y+R+DGS +EER +++ F D + +LS A G+ L A+ V+ + WNP
Sbjct: 834 YMRLDGSTKTEERTEMLNAFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQ 893
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA+DRAHRIGQ++ V I L+ + ++ + M KLD+ +
Sbjct: 894 DLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKV 939
>SGD|S000003118 [details] [associations]
symbol:INO80 "ATPase and nucleosome spacing factor"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA;IMP;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0042766 "nucleosome mobilization" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0043486 "histone exchange"
evidence=IDA] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
activity" evidence=IDA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IMP;IDA] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0043618 "regulation of transcription from RNA polymerase II
promoter in response to stress" evidence=IMP] [GO:0016584
"nucleosome positioning" evidence=IDA] [GO:0031011 "Ino80 complex"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 SGD:S000003118
GO:GO:0005524 EMBL:BK006941 GO:GO:0003677 GO:GO:0006281
GO:GO:0045944 GO:GO:0016887 GO:GO:0006366 GO:GO:0031011
GO:GO:0006348 GO:GO:0004386 GO:GO:0043486 GO:GO:0042766 EMBL:Z48618
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:X99960 GO:GO:0016584 GO:GO:0043618 KO:K11665
GeneTree:ENSGT00680000100052 HOGENOM:HOG000048482 OrthoDB:EOG41G6C8
EMBL:Z72672 PIR:S60416 RefSeq:NP_011365.1 ProteinModelPortal:P53115
SMR:P53115 DIP:DIP-1386N IntAct:P53115 MINT:MINT-388693
STRING:P53115 PaxDb:P53115 PeptideAtlas:P53115 EnsemblFungi:YGL150C
GeneID:852728 KEGG:sce:YGL150C CYGD:YGL150c OMA:DEFSDWF
NextBio:972117 Genevestigator:P53115 GermOnline:YGL150C
Uniprot:P53115
Length = 1489
Score = 172 (65.6 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 37/89 (41%), Positives = 55/89 (61%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
+IR+DGS E+R+ +V +Q + V +LS A GI LTAA+ V+F + WNP I
Sbjct: 1342 HIRLDGSSKLEDRRDLVHDWQTNPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTID 1401
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADD 89
+QA DRAHR+GQ V + L+ + T ++
Sbjct: 1402 SQAMDRAHRLGQTRQVTVYRLLVRGTIEE 1430
>SGD|S000006003 [details] [associations]
symbol:MOT1 "Essential protein involved in regulation of
transcription" species:4932 "Saccharomyces cerevisiae" [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0000228 "nuclear chromosome" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0045898 "regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0042790 "transcription of nuclear large rRNA
transcript from RNA polymerase I promoter" evidence=IMP;IDA]
[GO:0006364 "rRNA processing" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SGD:S000006003 GO:GO:0005739 GO:GO:0005524
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0003677 GO:GO:0016887 EMBL:BK006949
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:U41849 GO:GO:0000228 GO:GO:0006364
HOGENOM:HOG000210415 KO:K15192 OMA:TKQEGAI InterPro:IPR022707
Pfam:PF12054 GO:GO:0042790 GO:GO:0045898 OrthoDB:EOG44XNQZ
EMBL:M83224 PIR:S22775 RefSeq:NP_015243.1 ProteinModelPortal:P32333
SMR:P32333 DIP:DIP-2418N IntAct:P32333 MINT:MINT-623118
STRING:P32333 PaxDb:P32333 PeptideAtlas:P32333 PRIDE:P32333
EnsemblFungi:YPL082C GeneID:856023 KEGG:sce:YPL082C CYGD:YPL082c
GeneTree:ENSGT00630000089754 NextBio:980935 Genevestigator:P32333
GermOnline:YPL082C Uniprot:P32333
Length = 1867
Score = 173 (66.0 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 36/105 (34%), Positives = 59/105 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DGS+ +R+ VV +F + +L+ G+ LT A+ V+F E WNP
Sbjct: 1676 YMRLDGSIDPRDRQKVVRKFNEDPSIDCLLLTTKVGGLGLNLTGADTVIFVEHDWNPMND 1735
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA DRAHRIGQ+ V + ++ K T ++ + L K+++ S +
Sbjct: 1736 LQAMDRAHRIGQKKVVNVYRIITKGTLEEKIMGLQKFKMNIASTV 1780
>UNIPROTKB|F1N507 [details] [associations]
symbol:Bt.112326 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 OMA:TKQEGAI InterPro:IPR022707
Pfam:PF12054 GeneTree:ENSGT00630000089754 EMBL:DAAA02058811
EMBL:DAAA02058810 IPI:IPI00685441 Ensembl:ENSBTAT00000021438
Uniprot:F1N507
Length = 1845
Score = 172 (65.6 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 37/105 (35%), Positives = 59/105 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DGS+ +R S+V +F + V +L+ G+ LT A+ VVF E WNP
Sbjct: 1670 YLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRD 1729
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA DRAHRIGQ V + L+ + T ++ + L K+++ + +
Sbjct: 1730 LQAMDRAHRIGQVKVVNVYRLITRGTLEEKIMGLQKFKMNIANTV 1774
>SGD|S000001934 [details] [associations]
symbol:IRC5 "Putative ATPase containing the DEAD/H
helicase-related sequence motif" species:4932 "Saccharomyces
cerevisiae" [GO:0006312 "mitotic recombination" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SGD:S000001934 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 EMBL:D50617 EMBL:BK006940 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006312 GeneTree:ENSGT00550000075106 PIR:S56293
RefSeq:NP_116696.2 ProteinModelPortal:P43610 SMR:P43610
DIP:DIP-5300N MINT:MINT-543614 STRING:P43610 PaxDb:P43610
PRIDE:P43610 EnsemblFungi:YFR038W GeneID:850599 KEGG:sce:YFR038W
CYGD:YFR038w OMA:FEIFNKW OrthoDB:EOG40S3Q6 NextBio:966463
Genevestigator:P43610 GermOnline:YFR038W Uniprot:P43610
Length = 853
Score = 168 (64.2 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 37/87 (42%), Positives = 51/87 (58%)
Query: 3 RIDGSVGSEERKSVVDQFQY-EDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGILT 61
RIDGSV +E RK +++F +DK + +LS AA GI L A+ VV + WNP +
Sbjct: 648 RIDGSVNNETRKDQLEKFNSSKDKHNIFLLSTRAAGLGINLVGADTVVLFDSDWNPQVDL 707
Query: 62 QAEDRAHRIGQQDSVLIQYLVAKQTAD 88
QA DR HRIGQ+ V++ L T +
Sbjct: 708 QAMDRCHRIGQESPVIVYRLCCDNTIE 734
>FB|FBgn0086613 [details] [associations]
symbol:Ino80 "Ino80" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0031011 "Ino80 complex" evidence=IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0000975 "regulatory region DNA
binding" evidence=IDA] [GO:0010468 "regulation of gene expression"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0006355 GO:GO:0006281 GO:GO:0006351 GO:GO:0016887
GO:GO:0006338 GO:GO:0031011 GO:GO:0006310 GO:GO:0005700
GO:GO:0010468 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0000975 KO:K11665
EMBL:AY069786 RefSeq:NP_732413.1 UniGene:Dm.33518
ProteinModelPortal:Q9VDY1 SMR:Q9VDY1 IntAct:Q9VDY1 STRING:Q9VDY1
PaxDb:Q9VDY1 EnsemblMetazoa:FBtr0083771 GeneID:42314
KEGG:dme:Dmel_CG31212 UCSC:CG31212-RA CTD:54617 FlyBase:FBgn0086613
GeneTree:ENSGT00680000100052 InParanoid:Q9VDY1 OMA:NTMAEVR
OrthoDB:EOG4SQVBH PhylomeDB:Q9VDY1 ChiTaRS:INO80 GenomeRNAi:42314
NextBio:828189 Bgee:Q9VDY1 Uniprot:Q9VDY1
Length = 1638
Score = 171 (65.3 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 38/101 (37%), Positives = 55/101 (54%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DGS R+ +V FQ V +LS A GI LTAA+ V+F + WNP +
Sbjct: 1199 YMRLDGSSKISARRDMVADFQTRADIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVD 1258
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
QA DRAHR+GQ V + L+ K T ++ + K ++
Sbjct: 1259 QQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAREKSEI 1299
>RGD|1565642 [details] [associations]
symbol:Srcap "Snf2-related CREBBP activator protein"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00384 SMART:SM00490 RGD:1565642
GO:GO:0005524 GO:GO:0005634 GO:GO:0005794 GO:GO:0043234
GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 OrthoDB:EOG4B2SWB
IPI:IPI00778475 Ensembl:ENSRNOT00000054997 UCSC:RGD:1565642
ArrayExpress:D3ZWX7 Uniprot:D3ZWX7
Length = 3182
Score = 174 (66.3 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 33/89 (37%), Positives = 57/89 (64%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DGS E+R++++++F + + +LS + G+ LT A+ VVF + WNP +
Sbjct: 2074 YLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMD 2133
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADD 89
QA+DR HRIGQ V I L++++T ++
Sbjct: 2134 AQAQDRCHRIGQTRDVHIYRLISERTVEE 2162
>TAIR|locus:2087780 [details] [associations]
symbol:PIE1 "PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0009910 "negative regulation of flower development"
evidence=IGI] [GO:0016514 "SWI/SNF complex" evidence=ISS]
[GO:0048441 "petal development" evidence=IGI] [GO:0048451 "petal
formation" evidence=IGI;RCA] [GO:0005618 "cell wall" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042742 "defense
response to bacterium" evidence=IGI;RCA] [GO:0046686 "response to
cadmium ion" evidence=IEP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0003002 "regionalization" evidence=RCA]
[GO:0006338 "chromatin remodeling" evidence=RCA] [GO:0007155 "cell
adhesion" evidence=RCA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0033043 "regulation of
organelle organization" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0048449 "floral organ formation"
evidence=RCA] [GO:0048453 "sepal formation" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005618
GO:GO:0046686 EMBL:CP002686 GO:GO:0003677 GO:GO:0042742
GO:GO:0003682 Gene3D:1.10.10.60 GO:GO:0016514 GO:GO:0004386
GO:GO:0009910 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 KO:K11320 GO:GO:0048451
EMBL:AY279398 IPI:IPI00545059 RefSeq:NP_187887.3 UniGene:At.39549
SMR:Q7X9V2 IntAct:Q7X9V2 STRING:Q7X9V2 EnsemblPlants:AT3G12810.1
GeneID:820463 KEGG:ath:AT3G12810 TAIR:At3g12810 InParanoid:Q7X9V2
OMA:CCHPPPS ProtClustDB:CLSN2680833 Genevestigator:Q7X9V2
Uniprot:Q7X9V2
Length = 2055
Score = 172 (65.6 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 34/89 (38%), Positives = 54/89 (60%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DGS EER++++ +F K + +LS + GI L A+ V+F + WNP +
Sbjct: 1118 YMRLDGSTPPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMD 1177
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADD 89
QA+DR HRIGQ V I L+++ T ++
Sbjct: 1178 QQAQDRCHRIGQTREVHIYRLISESTIEE 1206
>TIGR_CMR|BA_5487 [details] [associations]
symbol:BA_5487 "helicase, putative" species:198094
"Bacillus anthracis str. Ames" [GO:0003677 "DNA binding"
evidence=ISS] [GO:0004386 "helicase activity" evidence=ISS]
[GO:0006268 "DNA unwinding involved in replication" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003677
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
HOGENOM:HOG000099451 InterPro:IPR022138 Pfam:PF12419
RefSeq:NP_847649.1 RefSeq:YP_022153.1 RefSeq:YP_031335.1
ProteinModelPortal:Q81K50 IntAct:Q81K50 DNASU:1085116
EnsemblBacteria:EBBACT00000010571 EnsemblBacteria:EBBACT00000018432
EnsemblBacteria:EBBACT00000022093 GeneID:1085116 GeneID:2819120
GeneID:2852260 KEGG:ban:BA_5487 KEGG:bar:GBAA_5487 KEGG:bat:BAS5096
OMA:ASTIYEF ProtClustDB:CLSK888016
BioCyc:BANT260799:GJAJ-5171-MONOMER
BioCyc:BANT261594:GJ7F-5349-MONOMER Uniprot:Q81K50
Length = 918
Score = 168 (64.2 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 33/86 (38%), Positives = 55/86 (63%)
Query: 4 IDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGILTQA 63
++GSV +ER +++QFQ + + +LS+ A +G+ LTAAN V+ + +WNP + QA
Sbjct: 797 LNGSVPKKERDKMIEQFQ-NGTYDIFILSLKAGGTGLNLTAANHVIHYDRWWNPAVENQA 855
Query: 64 EDRAHRIGQQDSVLIQYLVAKQTADD 89
DRA+RIGQ+ V + L+ T ++
Sbjct: 856 TDRAYRIGQKRFVHVHKLITTGTLEE 881
>UNIPROTKB|Q6ZRS2 [details] [associations]
symbol:SRCAP "Helicase SRCAP" species:9606 "Homo sapiens"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0003713 "transcription
coactivator activity" evidence=TAS] [GO:0004402 "histone
acetyltransferase activity" evidence=TAS] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0016573 "histone acetylation" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
GO:GO:0019048 GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478
PRINTS:PR00929 GO:GO:0006357 GO:GO:0006351 GO:GO:0003713
GO:GO:0004386 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC106886 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 GO:GO:0004402
EMBL:AC093249 EMBL:AK128030 EMBL:AB002307 EMBL:BC159099
EMBL:AF143946 IPI:IPI00009101 IPI:IPI00444046 IPI:IPI00550342
RefSeq:NP_006653.2 UniGene:Hs.647334 ProteinModelPortal:Q6ZRS2
SMR:Q6ZRS2 IntAct:Q6ZRS2 MINT:MINT-123408 STRING:Q6ZRS2
PhosphoSite:Q6ZRS2 DMDM:296452947 PaxDb:Q6ZRS2 PRIDE:Q6ZRS2
DNASU:10847 Ensembl:ENST00000262518 Ensembl:ENST00000344771
Ensembl:ENST00000380361 Ensembl:ENST00000395059 GeneID:10847
KEGG:hsa:10847 UCSC:uc002dze.1 UCSC:uc002dzg.1 CTD:10847
GeneCards:GC16P030710 H-InvDB:HIX0012970 HGNC:HGNC:16974
HPA:HPA028929 MIM:136140 MIM:611421 neXtProt:NX_Q6ZRS2
Orphanet:2044 PharmGKB:PA162404706 HOGENOM:HOG000168717
InParanoid:Q6ZRS2 KO:K11661 OMA:LGTGNPQ OrthoDB:EOG4B2SWB
ChiTaRS:SRCAP GenomeRNAi:10847 NextBio:41182 ArrayExpress:Q6ZRS2
Bgee:Q6ZRS2 CleanEx:HS_SRCAP Genevestigator:Q6ZRS2 Uniprot:Q6ZRS2
Length = 3230
Score = 174 (66.3 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 33/89 (37%), Positives = 57/89 (64%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DGS E+R++++++F + + +LS + G+ LT A+ VVF + WNP +
Sbjct: 2086 YLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMD 2145
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADD 89
QA+DR HRIGQ V I L++++T ++
Sbjct: 2146 AQAQDRCHRIGQTRDVHIYRLISERTVEE 2174
>UNIPROTKB|F1RG74 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043234 "protein complex" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
GeneTree:ENSGT00530000063427 OMA:LGTGNPQ EMBL:FP102572
Ensembl:ENSSSCT00000008537 Uniprot:F1RG74
Length = 3230
Score = 174 (66.3 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 33/89 (37%), Positives = 57/89 (64%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DGS E+R++++++F + + +LS + G+ LT A+ VVF + WNP +
Sbjct: 2086 YLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMD 2145
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADD 89
QA+DR HRIGQ V I L++++T ++
Sbjct: 2146 AQAQDRCHRIGQTRDVHIYRLISERTVEE 2174
>UNIPROTKB|E1BC33 [details] [associations]
symbol:LOC788113 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0043234 "protein complex" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00384 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478
PRINTS:PR00929 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GeneTree:ENSGT00530000063427 OMA:LGTGNPQ
EMBL:DAAA02057908 IPI:IPI00705506 Ensembl:ENSBTAT00000018503
Uniprot:E1BC33
Length = 3242
Score = 174 (66.3 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 33/89 (37%), Positives = 57/89 (64%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DGS E+R++++++F + + +LS + G+ LT A+ VVF + WNP +
Sbjct: 2097 YLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMD 2156
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADD 89
QA+DR HRIGQ V I L++++T ++
Sbjct: 2157 AQAQDRCHRIGQTRDVHIYRLISERTVEE 2185
>UNIPROTKB|B5MDZ7 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR001650 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:AL356378 GO:GO:0003676 GO:GO:0004386
InterPro:IPR002589 PROSITE:PS51154 HGNC:HGNC:1916 ChiTaRS:CHD1L
IPI:IPI00400835 ProteinModelPortal:B5MDZ7 SMR:B5MDZ7 STRING:B5MDZ7
PRIDE:B5MDZ7 Ensembl:ENST00000361293 HOGENOM:HOG000074191
HOVERGEN:HBG104833 ArrayExpress:B5MDZ7 Bgee:B5MDZ7 Uniprot:B5MDZ7
Length = 616
Score = 165 (63.1 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 40/105 (38%), Positives = 59/105 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y R+DGSV EER + F + F V +LS A G+ LTAA+ V+F + +NP
Sbjct: 109 YERVDGSVRGEERHLAIKNFGQQPIF-VFLLSTRAGGVGMNLTAADTVIFVDSDFNPQND 167
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA RAHRIGQ SV + L+ + T ++ ++ +KL + + I
Sbjct: 168 LQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMI 212
>UNIPROTKB|F1Q2U2 [details] [associations]
symbol:CHD1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 GO:GO:0008026 OMA:TCQTIAL
GeneTree:ENSGT00670000098110 EMBL:AAEX03011032
Ensembl:ENSCAFT00000017488 Uniprot:F1Q2U2
Length = 898
Score = 167 (63.8 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 40/105 (38%), Positives = 59/105 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y R+DGSV EER + F + F V +LS A G+ LTAA+ V+F + +NP
Sbjct: 391 YERVDGSVRGEERHLAIKNFGQQPVF-VFLLSTRAGGVGMNLTAADTVIFVDSDFNPQND 449
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA RAHRIGQ SV + L+ + T ++ ++ +KL + + I
Sbjct: 450 LQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNAI 494
>SGD|S000000017 [details] [associations]
symbol:FUN30 "Snf2p family member with ATP-dependent
chromatin remodeling activity" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0070870
"heterochromatin maintenance involved in chromatin silencing"
evidence=IGI;IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000729 "DNA double-strand break
processing" evidence=IMP] [GO:0031934 "mating-type region
heterochromatin" evidence=IPI] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IMP;IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IMP]
[GO:0000775 "chromosome, centromeric region" evidence=IDA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0000183 "chromatin
silencing at rDNA" evidence=IMP] [GO:0006348 "chromatin silencing
at telomere" evidence=IMP] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0070869 "heterochromatin assembly
involved in chromatin silencing" evidence=IMP] [GO:0006281 "DNA
repair" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
SGD:S000000017 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0000775 EMBL:L05146 EMBL:BK006935 GO:GO:0003677 GO:GO:0003682
GO:GO:0030466 GO:GO:0000183 GO:GO:0006348 GO:GO:0004386
GO:GO:0031934 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0070869 GO:GO:0000729
GO:GO:0008094 OrthoDB:EOG4BCHW4 KO:K14439 HOGENOM:HOG000195581
PIR:S22266 RefSeq:NP_009383.1 ProteinModelPortal:P31380 SMR:P31380
DIP:DIP-2541N IntAct:P31380 MINT:MINT-425278 STRING:P31380
PaxDb:P31380 PeptideAtlas:P31380 EnsemblFungi:YAL019W GeneID:851214
KEGG:sce:YAL019W CYGD:YAL019w GeneTree:ENSGT00630000089890
OMA:KIEPYYG NextBio:968097 Genevestigator:P31380 GermOnline:YAL019W
GO:GO:0070870 Uniprot:P31380
Length = 1131
Score = 168 (64.2 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 40/106 (37%), Positives = 60/106 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDK-FRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
++R+DGS +R+ ++D+F YEDK + +LS A GI L AN V+ + +NP
Sbjct: 993 FLRLDGSTQVNDRQLLIDKF-YEDKDIPIFILSTKAGGFGINLVCANNVIIFDQSFNPHD 1051
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA DRAHR+GQ V I L+ K + ++ + L KL + S I
Sbjct: 1052 DRQAADRAHRVGQTKEVNITTLITKDSIEEKIHQLAKNKLALDSYI 1097
>ZFIN|ZDB-GENE-021025-1 [details] [associations]
symbol:btaf1 "BTAF1 RNA polymerase II, B-TFIID
transcription factor-associated" species:7955 "Danio rerio"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR000357 InterPro:IPR001650 InterPro:IPR016024
Pfam:PF00176 Pfam:PF00271 Pfam:PF02985 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-021025-1 GO:GO:0005524 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR022707
Pfam:PF12054 GeneTree:ENSGT00630000089754 EMBL:BX530089
EMBL:CR792417 IPI:IPI00929996 Ensembl:ENSDART00000084327
ArrayExpress:F1Q603 Bgee:F1Q603 Uniprot:F1Q603
Length = 1861
Score = 170 (64.9 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 38/105 (36%), Positives = 59/105 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DGSV + R S+V +F + V +L+ G+ LT A+ VVF E WNP
Sbjct: 1684 YLRLDGSVQAGLRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRD 1743
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA DRAHRIGQ+ V + L+ + T ++ + L K+ + + +
Sbjct: 1744 LQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMTIANTV 1788
>FB|FBgn0022787 [details] [associations]
symbol:Hel89B "Helicase 89B" species:7227 "Drosophila
melanogaster" [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=NAS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0019730 "antimicrobial humoral response"
evidence=IMP] [GO:0006963 "positive regulation of antibacterial
peptide biosynthetic process" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0045087 "innate immune
response" evidence=IMP] [GO:0008063 "Toll signaling pathway"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0003677 GO:GO:0042742 GO:GO:0045087
GO:GO:0004003 GO:GO:0019730 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008063 GO:GO:0006963
InterPro:IPR022707 Pfam:PF12054 EMBL:AF033104
ProteinModelPortal:Q71V44 SMR:Q71V44 STRING:Q71V44 PaxDb:Q71V44
PRIDE:Q71V44 FlyBase:FBgn0022787 InParanoid:Q71V44
OrthoDB:EOG4ZGMT5 ArrayExpress:Q71V44 Bgee:Q71V44 Uniprot:Q71V44
Length = 1924
Score = 170 (64.9 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 35/99 (35%), Positives = 57/99 (57%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DGSV + +R+ +V+ F + V +L+ G+ LT A+ V+F E WNP
Sbjct: 1744 YLRLDGSVPASQRQDIVNNFNSDPSIDVLLLTTMVGGLGLNLTGADTVIFVEHDWNPMKD 1803
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKL 99
QA DRAHRIGQ+ V + L+ + + ++ + L K+
Sbjct: 1804 LQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMGLQKFKI 1842
>ASPGD|ASPL0000041040 [details] [associations]
symbol:AN9077 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0000812 "Swr1
complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 EMBL:BN001306 GO:GO:0006351
GO:GO:0016568 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GO:GO:0008026 EMBL:AACD01000169 KO:K11681
RefSeq:XP_682346.1 STRING:Q5ARK3 GeneID:2868023 KEGG:ani:AN9077.2
HOGENOM:HOG000186095 OMA:YGNQEER OrthoDB:EOG49S9FK Uniprot:Q5ARK3
Length = 1698
Score = 169 (64.5 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 33/88 (37%), Positives = 53/88 (60%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DG+ E+R+ + D+F +++ +LS + GI LT A+ V+F +L WNP +
Sbjct: 1416 YLRLDGTTKVEQRQILTDRFNNDNRILAFILSSRSGGLGINLTGADTVIFYDLDWNPAMD 1475
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTAD 88
Q +DR HRIGQ V I V++ T +
Sbjct: 1476 KQCQDRCHRIGQTRDVHIYRFVSEYTIE 1503
>UNIPROTKB|I3L7V5 [details] [associations]
symbol:TTF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR010666
Pfam:PF00176 Pfam:PF00271 Pfam:PF06839 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104545 EMBL:CU468873 EMBL:AEMK01166609
EMBL:CU207228 Ensembl:ENSSSCT00000031433 Uniprot:I3L7V5
Length = 1147
Score = 167 (63.8 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 35/105 (33%), Positives = 56/105 (53%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y IDGSV ++R +V+ F +V ++S+ A G+ LT N + ++ WNP +
Sbjct: 1021 YATIDGSVNPKQRMDLVEAFNSSGGPQVMLISLLAGGVGLNLTGGNHLFLLDMHWNPSLE 1080
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA DR +R+GQQ V+I V + T ++ + L K D+ I
Sbjct: 1081 DQASDRIYRVGQQKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQI 1125
>UNIPROTKB|F1SAY2 [details] [associations]
symbol:TTF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR010666
Pfam:PF00176 Pfam:PF00271 Pfam:PF06839 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104545 OMA:WCGSIPW EMBL:CU468873
EMBL:AEMK01166609 EMBL:CU207228 Ensembl:ENSSSCT00000007376
Uniprot:F1SAY2
Length = 1169
Score = 167 (63.8 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 35/105 (33%), Positives = 56/105 (53%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y IDGSV ++R +V+ F +V ++S+ A G+ LT N + ++ WNP +
Sbjct: 1043 YATIDGSVNPKQRMDLVEAFNSSGGPQVMLISLLAGGVGLNLTGGNHLFLLDMHWNPSLE 1102
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA DR +R+GQQ V+I V + T ++ + L K D+ I
Sbjct: 1103 DQASDRIYRVGQQKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQI 1147
>UNIPROTKB|Q86WJ1 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=IMP] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006200 "ATP
catabolic process" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 EMBL:AL356378 GO:GO:0006338
GO:GO:0004003 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154
CTD:9557 HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV EMBL:AF537213
EMBL:AK001342 EMBL:AK027631 EMBL:EF560738 EMBL:BC001171
EMBL:BC005038 EMBL:BC008649 EMBL:BC043501 EMBL:BC077717
EMBL:AK223496 IPI:IPI00329088 IPI:IPI00854584 IPI:IPI00890729
IPI:IPI00890749 RefSeq:NP_001243265.1 RefSeq:NP_001243266.1
RefSeq:NP_001243267.1 RefSeq:NP_004275.4 RefSeq:NP_078844.2
RefSeq:XP_003960255.1 RefSeq:XP_003960264.1 UniGene:Hs.191164
ProteinModelPortal:Q86WJ1 SMR:Q86WJ1 DIP:DIP-48933N IntAct:Q86WJ1
STRING:Q86WJ1 PhosphoSite:Q86WJ1 DMDM:311033359 PaxDb:Q86WJ1
PRIDE:Q86WJ1 Ensembl:ENST00000369258 Ensembl:ENST00000369259
Ensembl:ENST00000431239 Ensembl:ENST00000579763
Ensembl:ENST00000583055 GeneID:101060601 GeneID:9557
KEGG:hsa:101060601 KEGG:hsa:9557 UCSC:uc001epm.4 UCSC:uc001epo.4
UCSC:uc009wjh.3 GeneCards:GC01P146717 H-InvDB:HIX0000988
H-InvDB:HIX0028745 HGNC:HGNC:1916 HPA:HPA027789 HPA:HPA028670
MIM:613039 neXtProt:NX_Q86WJ1 PharmGKB:PA26452 InParanoid:Q86WJ1
OMA:TCQTIAL PhylomeDB:Q86WJ1 ChiTaRS:CHD1L GenomeRNAi:9557
NextBio:35849 ArrayExpress:Q86WJ1 Bgee:Q86WJ1 CleanEx:HS_CHD1L
Genevestigator:Q86WJ1 Uniprot:Q86WJ1
Length = 897
Score = 165 (63.1 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 40/105 (38%), Positives = 59/105 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y R+DGSV EER + F + F V +LS A G+ LTAA+ V+F + +NP
Sbjct: 390 YERVDGSVRGEERHLAIKNFGQQPIF-VFLLSTRAGGVGMNLTAADTVIFVDSDFNPQND 448
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA RAHRIGQ SV + L+ + T ++ ++ +KL + + I
Sbjct: 449 LQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMI 493
>GENEDB_PFALCIPARUM|PF11_0053 [details] [associations]
symbol:PF11_0053 "PfSNF2L" species:5833
"Plasmodium falciparum" [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0008026
EMBL:AE014186 GO:GO:0008094 KO:K01509 RefSeq:XP_001347729.1
ProteinModelPortal:Q8IIW0 IntAct:Q8IIW0 MINT:MINT-1585538
EnsemblProtists:PF11_0053:mRNA GeneID:810605 KEGG:pfa:PF11_0053
EuPathDB:PlasmoDB:PF3D7_1104200 HOGENOM:HOG000282197
ProtClustDB:CLSZ2444952 Uniprot:Q8IIW0
Length = 1426
Score = 167 (63.8 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 38/106 (35%), Positives = 62/106 (58%)
Query: 1 YIRIDGSVGSEERKSVVDQF-QYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y+RIDGS +ER+ ++QF + K+ + +LS A GI LT A++V+ + +NP +
Sbjct: 669 YLRIDGSTPGDERQVRINQFNEPNSKYFIFLLSTRAGGIGINLTTADIVILFDSDYNPQM 728
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA DRAHRIGQ+ V++ V + + ++ + KL + S I
Sbjct: 729 DIQAMDRAHRIGQKKRVIVYRFVTQNSVEEKIVERAAKKLKLDSLI 774
>UNIPROTKB|Q8IIW0 [details] [associations]
symbol:PF11_0053 "PfSNF2L" species:36329 "Plasmodium
falciparum 3D7" [GO:0006338 "chromatin remodeling" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0008026
EMBL:AE014186 GO:GO:0008094 KO:K01509 RefSeq:XP_001347729.1
ProteinModelPortal:Q8IIW0 IntAct:Q8IIW0 MINT:MINT-1585538
EnsemblProtists:PF11_0053:mRNA GeneID:810605 KEGG:pfa:PF11_0053
EuPathDB:PlasmoDB:PF3D7_1104200 HOGENOM:HOG000282197
ProtClustDB:CLSZ2444952 Uniprot:Q8IIW0
Length = 1426
Score = 167 (63.8 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 38/106 (35%), Positives = 62/106 (58%)
Query: 1 YIRIDGSVGSEERKSVVDQF-QYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y+RIDGS +ER+ ++QF + K+ + +LS A GI LT A++V+ + +NP +
Sbjct: 669 YLRIDGSTPGDERQVRINQFNEPNSKYFIFLLSTRAGGIGINLTTADIVILFDSDYNPQM 728
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA DRAHRIGQ+ V++ V + + ++ + KL + S I
Sbjct: 729 DIQAMDRAHRIGQKKRVIVYRFVTQNSVEEKIVERAAKKLKLDSLI 774
>ASPGD|ASPL0000056677 [details] [associations]
symbol:AN1024 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0006312 "mitotic
recombination" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 EMBL:BN001308 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
HOGENOM:HOG000172362 EnsemblFungi:CADANIAT00001623 OMA:NNITELW
Uniprot:C8VTY9
Length = 868
Score = 164 (62.8 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 33/89 (37%), Positives = 51/89 (57%)
Query: 3 RIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGILTQ 62
RIDG++ +R++ + F + +++ +LS A GI L AA+ V+ + WNP Q
Sbjct: 672 RIDGAISQADRQAQIKAFNTDKDYKIFLLSTRAGGQGINLVAADTVILFDSDWNPQQDLQ 731
Query: 63 AEDRAHRIGQQDSVLIQYLVAKQTADDYL 91
A+DRAHRIGQ V++ L K T + L
Sbjct: 732 AQDRAHRIGQTKPVIVYRLATKGTVEQTL 760
>CGD|CAL0003962 [details] [associations]
symbol:orf19.239 species:5476 "Candida albicans" [GO:0016586
"RSC complex" evidence=IEA] [GO:0007059 "chromosome segregation"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0031055 "chromatin remodeling at
centromere" evidence=IEA] [GO:0006337 "nucleosome disassembly"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0007010
"cytoskeleton organization" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0000086
"G2/M transition of mitotic cell cycle" evidence=IEA] [GO:0015616
"DNA translocase activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0003962 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
EMBL:AACQ01000027 EMBL:AACQ01000026 InterPro:IPR014012
PROSITE:PS51204 KO:K11786 RefSeq:XP_719938.1 RefSeq:XP_720068.1
ProteinModelPortal:Q5AEM9 STRING:Q5AEM9 GeneID:3638290
GeneID:3638351 KEGG:cal:CaO19.239 KEGG:cal:CaO19.7869
Uniprot:Q5AEM9
Length = 1303
Score = 166 (63.5 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 36/106 (33%), Positives = 58/106 (54%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDK-FRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y+R+DGS +EER+ ++ F D + +LS A G+ L A+ V+ + WNP
Sbjct: 863 YLRLDGSTKAEERQDMLKVFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQ 922
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA+DRAHRIGQ++ V I L+ + ++ + KLD+ +
Sbjct: 923 DLQAQDRAHRIGQKNEVRILRLITNDSVEEVILERAHQKLDIDGKV 968
>UNIPROTKB|Q9UNY4 [details] [associations]
symbol:TTF2 "Transcription termination factor 2"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=TAS] [GO:0008023
"transcription elongation factor complex" evidence=TAS] [GO:0008094
"DNA-dependent ATPase activity" evidence=TAS] [GO:0006353
"DNA-dependent transcription, termination" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR010666 Pfam:PF00176 Pfam:PF00271
Pfam:PF06839 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005737 GO:GO:0006355 GO:GO:0008380
GO:GO:0003677 GO:GO:0008270 GO:GO:0006397 GO:GO:0005681
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0008094 GO:GO:0008023 GO:GO:0006369
CleanEx:HS_TTF2 EMBL:AL445231 EMBL:AL391476 KO:K15173 EMBL:AF073771
EMBL:AF080255 EMBL:AK291017 EMBL:BC030058 IPI:IPI00290812
IPI:IPI00640904 RefSeq:NP_003585.3 UniGene:Hs.486818
ProteinModelPortal:Q9UNY4 SMR:Q9UNY4 IntAct:Q9UNY4 MINT:MINT-272557
STRING:Q9UNY4 PhosphoSite:Q9UNY4 DMDM:73920148 PaxDb:Q9UNY4
PRIDE:Q9UNY4 Ensembl:ENST00000369466 Ensembl:ENST00000427271
GeneID:8458 KEGG:hsa:8458 UCSC:uc001egx.1 UCSC:uc001egy.3 CTD:8458
GeneCards:GC01P117602 H-InvDB:HIX0000933 HGNC:HGNC:12398
HPA:HPA005776 MIM:604718 neXtProt:NX_Q9UNY4 PharmGKB:PA37063
HOGENOM:HOG000154708 HOVERGEN:HBG053179 InParanoid:Q9UNY4
OMA:WCGSIPW OrthoDB:EOG4GMTWH PhylomeDB:Q9UNY4 ChiTaRS:TTF2
GenomeRNAi:8458 NextBio:31654 Bgee:Q9UNY4 Genevestigator:Q9UNY4
GermOnline:ENSG00000116830 Uniprot:Q9UNY4
Length = 1162
Score = 165 (63.1 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 34/105 (32%), Positives = 57/105 (54%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y IDGSV ++R +V+ F + +V ++S+ A G+ LT N + ++ WNP +
Sbjct: 1036 YATIDGSVNPKQRMDLVEAFNHSRGPQVMLISLLAGGVGLNLTGGNHLFLLDMHWNPSLE 1095
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA DR +R+GQQ V+I V + T ++ + L K D+ +
Sbjct: 1096 DQACDRIYRVGQQKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQV 1140
>UNIPROTKB|F1N2E8 [details] [associations]
symbol:TTF2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR010666 Pfam:PF00176 Pfam:PF00271
Pfam:PF06839 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003677
GO:GO:0008270 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00700000104545 OMA:WCGSIPW
EMBL:DAAA02007409 IPI:IPI00710264 UniGene:Bt.10162 PRIDE:F1N2E8
Ensembl:ENSBTAT00000033711 Uniprot:F1N2E8
Length = 1163
Score = 165 (63.1 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 35/105 (33%), Positives = 57/105 (54%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y IDGSV ++R +V+ F +V ++S+ A G+ LT N + ++ WNP +
Sbjct: 1037 YATIDGSVNPKQRMDLVEAFNSPRGPQVMLISLLAGGVGLNLTGGNHLFLLDMHWNPSLE 1096
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA DR +R+GQQ V+I V ++T ++ + L K D+ I
Sbjct: 1097 DQACDRIYRVGQQKDVVIHKFVCEETVEEKILQLQEKKKDLAKQI 1141
>MGI|MGI:95453 [details] [associations]
symbol:Smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1" species:10090 "Mus musculus" [GO:0000018 "regulation
of DNA recombination" evidence=ISS] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000729 "DNA double-strand break
processing" evidence=ISO] [GO:0000792 "heterochromatin"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=ISO] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=ISO] [GO:0043596 "nuclear replication fork" evidence=ISO]
[GO:0051304 "chromosome separation" evidence=ISO] [GO:0070932
"histone H3 deacetylation" evidence=ISO] [GO:0070933 "histone H4
deacetylation" evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 MGI:MGI:95453 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0043596 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 GO:GO:0000792 GO:GO:0070932 GO:GO:0070933
GO:GO:0000729 GO:GO:0000018 HOGENOM:HOG000172362 GO:GO:0035861
KO:K14439 GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ
CTD:56916 HOVERGEN:HBG055804 EMBL:X69942 EMBL:AK122454
EMBL:BC042442 EMBL:AK134442 EMBL:AK147884 IPI:IPI00223926
IPI:IPI00556837 PIR:A56559 RefSeq:NP_001240321.1 RefSeq:NP_031984.1
UniGene:Mm.99113 ProteinModelPortal:Q04692 SMR:Q04692 STRING:Q04692
PhosphoSite:Q04692 PaxDb:Q04692 PRIDE:Q04692
Ensembl:ENSMUST00000031984 GeneID:13990 KEGG:mmu:13990
UCSC:uc009ced.1 UCSC:uc012emw.1 InParanoid:Q04692 OrthoDB:EOG4RV2QW
NextBio:284868 Bgee:Q04692 Genevestigator:Q04692
GermOnline:ENSMUSG00000029920 Uniprot:Q04692
Length = 1021
Score = 164 (62.8 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 36/99 (36%), Positives = 57/99 (57%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DG ER ++D+F + V +LS A GI LT+AN+V+ ++ NP
Sbjct: 892 YLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYND 951
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKL 99
QAEDR HR+GQ VL+ L+++ T ++ + + KL
Sbjct: 952 KQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKL 990
>RGD|1309640 [details] [associations]
symbol:Smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1`" species:10116 "Rattus norvegicus" [GO:0000018
"regulation of DNA recombination" evidence=IEA;ISO] [GO:0000729
"DNA double-strand break processing" evidence=ISO;ISS] [GO:0000792
"heterochromatin" evidence=ISO;ISS] [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0035861 "site of double-strand break"
evidence=ISO;ISS] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=ISO;ISS] [GO:0043596 "nuclear replication fork"
evidence=IEA;ISO] [GO:0051304 "chromosome separation"
evidence=ISO;ISS] [GO:0070932 "histone H3 deacetylation"
evidence=ISO;ISS] [GO:0070933 "histone H4 deacetylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140 PROSITE:PS51194
SMART:SM00490 RGD:1309640 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0000729 GO:GO:0000018 GO:GO:0035861 KO:K14439
GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ CTD:56916
OrthoDB:EOG4RV2QW EMBL:AABR03032021 IPI:IPI00765483
RefSeq:NP_001101334.2 UniGene:Rn.7758 ProteinModelPortal:D3Z9Z9
Ensembl:ENSRNOT00000008585 GeneID:312398 KEGG:rno:312398
UCSC:RGD:1309640 Uniprot:D3Z9Z9
Length = 1024
Score = 164 (62.8 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 36/99 (36%), Positives = 57/99 (57%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DG ER ++D+F + V +LS A GI LT+AN+V+ ++ NP
Sbjct: 895 YLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYND 954
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKL 99
QAEDR HR+GQ VL+ L+++ T ++ + + KL
Sbjct: 955 KQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKL 993
>UNIPROTKB|E2RG62 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0070933 "histone H4 deacetylation"
evidence=IEA] [GO:0070932 "histone H3 deacetylation" evidence=IEA]
[GO:0051304 "chromosome separation" evidence=IEA] [GO:0043596
"nuclear replication fork" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035861 "site of
double-strand break" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=IEA]
[GO:0000018 "regulation of DNA recombination" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000018
GeneTree:ENSGT00630000089890 GO:GO:0051304 EMBL:AAEX03016768
EMBL:AAEX03016769 Ensembl:ENSCAFT00000015951 Uniprot:E2RG62
Length = 1026
Score = 164 (62.8 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 36/99 (36%), Positives = 57/99 (57%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DG ER ++D+F + V +LS A GI LT+AN+V+ ++ NP
Sbjct: 897 YLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYND 956
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKL 99
QAEDR HR+GQ VL+ L+++ T ++ + + KL
Sbjct: 957 KQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKL 995
>UNIPROTKB|J9NX47 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GeneTree:ENSGT00630000089890
EMBL:AAEX03016768 EMBL:AAEX03016769 Ensembl:ENSCAFT00000044961
Uniprot:J9NX47
Length = 1026
Score = 164 (62.8 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 36/99 (36%), Positives = 57/99 (57%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DG ER ++D+F + V +LS A GI LT+AN+V+ ++ NP
Sbjct: 897 YLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYND 956
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKL 99
QAEDR HR+GQ VL+ L+++ T ++ + + KL
Sbjct: 957 KQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKL 995
>UNIPROTKB|J9PA79 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GeneTree:ENSGT00630000089890
OMA:KNQRGIQ EMBL:AAEX03016768 EMBL:AAEX03016769
Ensembl:ENSCAFT00000043847 Uniprot:J9PA79
Length = 1026
Score = 164 (62.8 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 36/99 (36%), Positives = 57/99 (57%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DG ER ++D+F + V +LS A GI LT+AN+V+ ++ NP
Sbjct: 897 YLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYND 956
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKL 99
QAEDR HR+GQ VL+ L+++ T ++ + + KL
Sbjct: 957 KQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKL 995
>UNIPROTKB|Q9H4L7 [details] [associations]
symbol:SMARCAD1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A containing
DEAD/H box 1" species:9606 "Homo sapiens" [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0009117 "nucleotide metabolic process" evidence=NAS]
[GO:0003676 "nucleic acid binding" evidence=NAS] [GO:0016363
"nuclear matrix" evidence=NAS] [GO:0051260 "protein
homooligomerization" evidence=NAS] [GO:0000018 "regulation of DNA
recombination" evidence=IEP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0016568 "chromatin
modification" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003677 "DNA binding" evidence=IDA] [GO:0000729
"DNA double-strand break processing" evidence=IMP] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IMP] [GO:0035861
"site of double-strand break" evidence=IDA] [GO:0043596 "nuclear
replication fork" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=NAS] [GO:0051304 "chromosome separation" evidence=IMP]
[GO:0070932 "histone H3 deacetylation" evidence=IMP] [GO:0070933
"histone H4 deacetylation" evidence=IMP] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR003892 InterPro:IPR009060
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0045893 GO:GO:0003677
GO:GO:0009117 GO:GO:0051260 GO:GO:0043596 GO:GO:0004386
GO:GO:0016363 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000729 GO:GO:0000018
HOGENOM:HOG000172362 GO:GO:0035861 KO:K14439 GO:GO:0051304
OMA:KNQRGIQ EMBL:AY008271 EMBL:AB032948 EMBL:AK023990 EMBL:AK027490
EMBL:AK301668 EMBL:AC096746 EMBL:BC017953 EMBL:BC045534
EMBL:AL359929 EMBL:AL512768 IPI:IPI00008422 IPI:IPI00220119
RefSeq:NP_001121901.1 RefSeq:NP_001121902.1 RefSeq:NP_001241878.1
RefSeq:NP_064544.2 UniGene:Hs.410406 ProteinModelPortal:Q9H4L7
SMR:Q9H4L7 STRING:Q9H4L7 PhosphoSite:Q9H4L7 DMDM:306526240
PaxDb:Q9H4L7 PRIDE:Q9H4L7 DNASU:56916 Ensembl:ENST00000354268
Ensembl:ENST00000359052 Ensembl:ENST00000457823
Ensembl:ENST00000509418 GeneID:56916 KEGG:hsa:56916 UCSC:uc003htb.4
UCSC:uc003htc.4 CTD:56916 GeneCards:GC04P095128 H-InvDB:HIX0004380
HGNC:HGNC:18398 HPA:HPA016737 MIM:136000 MIM:612761
neXtProt:NX_Q9H4L7 Orphanet:289465 PharmGKB:PA134954731
HOVERGEN:HBG055804 ChiTaRS:SMARCAD1 GenomeRNAi:56916 NextBio:62407
ArrayExpress:Q9H4L7 Bgee:Q9H4L7 CleanEx:HS_SMARCAD1
Genevestigator:Q9H4L7 GermOnline:ENSG00000163104 Uniprot:Q9H4L7
Length = 1026
Score = 164 (62.8 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 36/99 (36%), Positives = 57/99 (57%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DG ER ++D+F + V +LS A GI LT+AN+V+ ++ NP
Sbjct: 897 YLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYND 956
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKL 99
QAEDR HR+GQ VL+ L+++ T ++ + + KL
Sbjct: 957 KQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKL 995
>UNIPROTKB|F1RWW3 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0051304
"chromosome separation" evidence=IEA] [GO:0043596 "nuclear
replication fork" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035861 "site of
double-strand break" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=IEA]
[GO:0000018 "regulation of DNA recombination" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000018
GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ
EMBL:CU951443 Ensembl:ENSSSCT00000010066 Uniprot:F1RWW3
Length = 1029
Score = 164 (62.8 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 36/99 (36%), Positives = 57/99 (57%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DG ER ++D+F + V +LS A GI LT+AN+V+ ++ NP
Sbjct: 900 YLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYND 959
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKL 99
QAEDR HR+GQ VL+ L+++ T ++ + + KL
Sbjct: 960 KQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKL 998
>TIGR_CMR|BA_1804 [details] [associations]
symbol:BA_1804 "helicase, putative" species:198094
"Bacillus anthracis str. Ames" [GO:0003677 "DNA binding"
evidence=ISS] [GO:0004386 "helicase activity" evidence=ISS]
[GO:0006268 "DNA unwinding involved in replication" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR007527
Pfam:PF00176 Pfam:PF00271 Pfam:PF04434 PROSITE:PS50966
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003677
GO:GO:0008270 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 HOGENOM:HOG000026038 OMA:NTLNAEM InterPro:IPR013663
Pfam:PF08455 RefSeq:NP_844228.1 RefSeq:YP_018441.1
RefSeq:YP_027937.1 ProteinModelPortal:Q81S67 IntAct:Q81S67
DNASU:1086172 EnsemblBacteria:EBBACT00000012419
EnsemblBacteria:EBBACT00000014433 EnsemblBacteria:EBBACT00000022268
GeneID:1086172 GeneID:2814636 GeneID:2849386 KEGG:ban:BA_1804
KEGG:bar:GBAA_1804 KEGG:bat:BAS1671 ProtClustDB:CLSK916372
BioCyc:BANT260799:GJAJ-1742-MONOMER
BioCyc:BANT261594:GJ7F-1813-MONOMER Uniprot:Q81S67
Length = 1064
Score = 164 (62.8 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 34/98 (34%), Positives = 62/98 (63%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y +DG+ S+ER + ++F E + + ++S+ A +G+ LT A+ V+ +L+WNP +
Sbjct: 939 YFYLDGNTPSQERVELCNRFN-EGEGDLFLISLKAGGTGLNLTGADTVILYDLWWNPAVE 997
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTK 98
QA DRA+R+GQ+++V + LVA T ++ + L +K
Sbjct: 998 QQAADRAYRMGQKNTVQVIKLVAHGTIEEKMHELQESK 1035
>MGI|MGI:1915308 [details] [associations]
symbol:Chd1l "chromodomain helicase DNA binding protein
1-like" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1915308 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000166 GO:GO:0003677 GO:GO:0006281
GO:GO:0006974 GO:GO:0016887 GO:GO:0006338 GO:GO:0004386 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR002589 PROSITE:PS51154 CTD:9557 HOGENOM:HOG000030789
HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV OMA:TCQTIAL ChiTaRS:CHD1L
EMBL:AK014473 EMBL:AK165656 EMBL:BC052385 EMBL:BC057567
EMBL:BC062966 IPI:IPI00466859 IPI:IPI00890897 RefSeq:NP_080815.1
UniGene:Mm.41447 ProteinModelPortal:Q9CXF7 SMR:Q9CXF7
DIP:DIP-58953N STRING:Q9CXF7 PhosphoSite:Q9CXF7 PaxDb:Q9CXF7
PRIDE:Q9CXF7 Ensembl:ENSMUST00000029730 GeneID:68058 KEGG:mmu:68058
UCSC:uc008qow.1 UCSC:uc008qox.1 GeneTree:ENSGT00670000098110
InParanoid:Q9CXF7 NextBio:326336 Bgee:Q9CXF7 Genevestigator:Q9CXF7
Uniprot:Q9CXF7
Length = 900
Score = 163 (62.4 bits), Expect = 8.0e-11, P = 8.0e-11
Identities = 39/105 (37%), Positives = 59/105 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y R+DGSV EER + F + F V +LS A G+ LTAA+ V+F + +NP
Sbjct: 384 YERVDGSVRGEERHLAIKNFGNQPIF-VFLLSTRAGGVGMNLTAADTVIFVDSDFNPQND 442
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA RAHRIGQ SV + L+ + T ++ ++ +KL + + +
Sbjct: 443 LQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMV 487
>RGD|1311935 [details] [associations]
symbol:Chd1l "chromodomain helicase DNA binding protein 1-like"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 RGD:1311935 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003677
GO:GO:0006974 GO:GO:0016887 GO:GO:0006338 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 OrthoDB:EOG4SXNBV GeneTree:ENSGT00670000098110
IPI:IPI00560655 Ensembl:ENSRNOT00000043937 UCSC:RGD:1311935
ArrayExpress:D4ACG6 Uniprot:D4ACG6
Length = 903
Score = 163 (62.4 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 39/105 (37%), Positives = 59/105 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y R+DGSV EER + F + F V +LS A G+ LTAA+ V+F + +NP
Sbjct: 384 YERVDGSVRGEERHLAIKNFGKQPIF-VFLLSTRAGGVGMNLTAADTVIFVDSDFNPQND 442
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA RAHRIGQ SV + L+ + T ++ ++ +KL + + +
Sbjct: 443 LQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMV 487
>POMBASE|SPBC582.10c [details] [associations]
symbol:SPBC582.10c "ATP-dependent DNA helicase Rhp16b
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000113
"nucleotide-excision repair factor 4 complex" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006289 "nucleotide-excision repair"
evidence=ISO] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
PomBase:SPBC582.10c GO:GO:0005829 GO:GO:0005524 GO:GO:0003677
EMBL:CU329671 GO:GO:0000113 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006289
GO:GO:0008094 EMBL:AB027965 PIR:T37973 RefSeq:NP_595178.1
ProteinModelPortal:Q10332 EnsemblFungi:SPBC582.10c.1 GeneID:2540907
KEGG:spo:SPBC582.10c HOGENOM:HOG000241058 OMA:QACNHPQ
OrthoDB:EOG44XNQX NextBio:20802022 Uniprot:Q10332
Length = 830
Score = 162 (62.1 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 33/101 (32%), Positives = 57/101 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
++R DG + + R+ +D + + +V + S+ G+ LT A+ V+ +++WNP I
Sbjct: 697 FVRYDGRMNNRAREKSLDLLRSDSGTQVLLCSLKCGALGLNLTCASRVILCDVWWNPAIE 756
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
QA DR HRIGQ+ VL+ LV + T ++ + L K D+
Sbjct: 757 EQAIDRVHRIGQRRDVLVYKLVVENTIEEKIVELQNLKRDL 797
>UNIPROTKB|Q5FWR0 [details] [associations]
symbol:smarcad1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A containing
DEAD/H box 1" species:8364 "Xenopus (Silurana) tropicalis"
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000729 HOGENOM:HOG000172362 GO:GO:0035861 KO:K14439
HOVERGEN:HBG055804 OrthoDB:EOG4RV2QW EMBL:AAMC01061573
EMBL:AAMC01061574 EMBL:AAMC01061575 EMBL:BC089242
RefSeq:NP_001015697.1 UniGene:Str.34312 ProteinModelPortal:Q5FWR0
GeneID:548414 KEGG:xtr:548414 Xenbase:XB-GENE-492700
InParanoid:Q5FWR0 Uniprot:Q5FWR0
Length = 1003
Score = 163 (62.4 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 35/99 (35%), Positives = 55/99 (55%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DG ER ++D+F + + +LS A GI LT+AN+V+ ++ NP
Sbjct: 874 YVRLDGKTQISERIHLIDEFNTDMDIFIFLLSTKAGGLGINLTSANIVILHDIDCNPYND 933
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKL 99
QAEDR HR+GQ V + L+ K T ++ + + KL
Sbjct: 934 KQAEDRCHRVGQTKEVKVIKLIGKGTIEESMLKISQQKL 972
>UNIPROTKB|E1B7X9 [details] [associations]
symbol:SMARCAD1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A containing
DEAD/H box 1" species:9913 "Bos taurus" [GO:0035861 "site of
double-strand break" evidence=ISS] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=ISS] [GO:0000729 "DNA double-strand
break processing" evidence=ISS] [GO:0070933 "histone H4
deacetylation" evidence=ISS] [GO:0070932 "histone H3 deacetylation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0051304 "chromosome separation"
evidence=ISS] [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000018 "regulation of
DNA recombination" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000792 GO:GO:0070932 GO:GO:0070933 GO:GO:0000729
GO:GO:0000018 GO:GO:0035861 GeneTree:ENSGT00630000089890
GO:GO:0051304 EMBL:DAAA02016925 EMBL:DAAA02016926 IPI:IPI00826348
UniGene:Bt.77636 Ensembl:ENSBTAT00000047936 OMA:KNQRGIQ
Uniprot:E1B7X9
Length = 1028
Score = 163 (62.4 bits), Expect = 9.5e-11, P = 9.5e-11
Identities = 36/99 (36%), Positives = 56/99 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DG ER ++D+F + V +LS A GI LT+AN+V+ ++ NP
Sbjct: 899 YLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYND 958
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKL 99
QAEDR HR+GQ VL+ L+ + T ++ + + KL
Sbjct: 959 KQAEDRCHRVGQTKEVLVIKLIGQGTIEESMLKINQQKL 997
>ZFIN|ZDB-GENE-030131-5964 [details] [associations]
symbol:smarca2 "SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, subfamily a,
member 2" species:7955 "Danio rerio" [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 ZFIN:ZDB-GENE-030131-5964 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 KO:K11647
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 CTD:6595
HOVERGEN:HBG056636 EMBL:BC060676 IPI:IPI00483012 RefSeq:NP_997881.1
UniGene:Dr.93531 ProteinModelPortal:Q6P9P2 SMR:Q6P9P2 STRING:Q6P9P2
GeneID:334032 KEGG:dre:334032 InParanoid:Q6P9P2 NextBio:20810237
ArrayExpress:Q6P9P2 Uniprot:Q6P9P2
Length = 1568
Score = 165 (63.1 bits), Expect = 9.7e-11, P = 9.7e-11
Identities = 37/106 (34%), Positives = 60/106 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYE-DKFRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y+R+DG+ SE+R ++ +F E ++ + +LS A G+ L AA+ VV + WNP
Sbjct: 1095 YLRLDGTTKSEDRAMLLKKFNEEGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQ 1154
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA+DRAHRIGQQ+ V + L + ++ + KL+V +
Sbjct: 1155 DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKV 1200
>POMBASE|SPBC1826.01c [details] [associations]
symbol:mot1 "TATA-binding protein associated factor
Mot1 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IC] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0017025 "TBP-class
protein binding" evidence=ISO] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 PomBase:SPBC1826.01c GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0006355 GO:GO:0003677 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 GO:GO:0006366 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
HOGENOM:HOG000210415 KO:K15192 OMA:TKQEGAI InterPro:IPR022707
Pfam:PF12054 GO:GO:0017025 EMBL:AB027981 PIR:T39739
RefSeq:NP_596080.2 ProteinModelPortal:O43065 STRING:O43065
EnsemblFungi:SPBC1826.01c.1 GeneID:2539633 KEGG:spo:SPBC1826.01c
OrthoDB:EOG44XNQZ NextBio:20800788 Uniprot:O43065
Length = 1953
Score = 166 (63.5 bits), Expect = 9.8e-11, P = 9.8e-11
Identities = 37/105 (35%), Positives = 58/105 (55%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DGSV +R+ V +F + V +L+ G+ LT A+ V+F E WNP
Sbjct: 1766 YMRLDGSVEPTKRQEAVTKFNNDPSIDVLLLTTHVGGLGLNLTGADTVIFVEHDWNPMRD 1825
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA DRAHRIGQ+ V + L+ + ++ + L K++V S +
Sbjct: 1826 LQAMDRAHRIGQKKVVNVYRLITRGCLEEKIMGLQRFKMNVASTV 1870
>FB|FBgn0020306 [details] [associations]
symbol:dom "domino" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=IEA;NAS] [GO:0008283 "cell
proliferation" evidence=NAS] [GO:0016458 "gene silencing"
evidence=IGI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0002165 "instar larval or pupal development"
evidence=IMP] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0048477 "oogenesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0035207 "negative regulation of hemocyte
proliferation" evidence=TAS] [GO:0030097 "hemopoiesis"
evidence=TAS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000381 "regulation of alternative
mRNA splicing, via spliceosome" evidence=IMP] [GO:0000123 "histone
acetyltransferase complex" evidence=IPI] [GO:0045747 "positive
regulation of Notch signaling pathway" evidence=IGI] [GO:0035222
"wing disc pattern formation" evidence=IGI] [GO:0010629 "negative
regulation of gene expression" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0070983 "dendrite guidance"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP] [GO:2000637
"positive regulation of gene silencing by miRNA" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 EMBL:AE013599 GO:GO:0005524
GO:GO:0006355 GO:GO:0003677 GO:GO:0035222 GO:GO:0048477
GO:GO:0016573 GO:GO:0045747 GO:GO:0006351 GO:GO:0007049
GO:GO:0035267 GO:GO:0004386 GO:GO:0030097 GO:GO:0043486
GO:GO:2000637 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016458 InterPro:IPR017877
PROSITE:PS50090 GO:GO:0070983 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0008094 GO:GO:0000381 EMBL:AF076776 EMBL:AF254373
EMBL:AY058653 RefSeq:NP_524833.2 RefSeq:NP_788424.1 UniGene:Dm.7802
ProteinModelPortal:Q9NDJ2 SMR:Q9NDJ2 IntAct:Q9NDJ2 STRING:Q9NDJ2
PaxDb:Q9NDJ2 EnsemblMetazoa:FBtr0071603 GeneID:45655
KEGG:dme:Dmel_CG9696 UCSC:CG9696-RA CTD:45655 FlyBase:FBgn0020306
GeneTree:ENSGT00530000063427 InParanoid:Q9NDJ2 KO:K11320
OMA:TENDASA OrthoDB:EOG4C5B08 PhylomeDB:Q9NDJ2 GenomeRNAi:45655
NextBio:838265 Bgee:Q9NDJ2 GO:GO:0002165 GO:GO:0035207
Uniprot:Q9NDJ2
Length = 3198
Score = 168 (64.2 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 34/88 (38%), Positives = 55/88 (62%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DGS E+R+ ++++F + + +LS + GI LT A+ V+F + WNP +
Sbjct: 1701 YLRLDGSTRVEQRQILMERFNGDKRIFCFILSTRSGGVGINLTGADTVIFYDSDWNPTMD 1760
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTAD 88
QA+DR HRIGQ V I LV+++T +
Sbjct: 1761 AQAQDRCHRIGQTRDVHIYRLVSERTIE 1788
>UNIPROTKB|G4MNF9 [details] [associations]
symbol:MGG_06945 "Helicase" species:242507 "Magnaporthe
oryzae 70-15" [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
EMBL:CM001231 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
RefSeq:XP_003709685.1 ProteinModelPortal:G4MNF9
EnsemblFungi:MGG_06945T0 GeneID:2685118 KEGG:mgr:MGG_06945
Uniprot:G4MNF9
Length = 1103
Score = 163 (62.4 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 35/92 (38%), Positives = 56/92 (60%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y +DGS+ EER+ +VD F + + V ++S A G+ +T+AN VV + WNP
Sbjct: 614 YSYLDGSLAIEERQQIVDDFNSDPQQFVFLISTKAGGVGLNITSANKVVIFDPHWNPSWD 673
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLW 92
QA+DRA+RIGQ V + LV++ T ++ ++
Sbjct: 674 LQAQDRAYRIGQTRDVDVFRLVSQGTIEEIVY 705
>MGI|MGI:1921294 [details] [associations]
symbol:Ttf2 "transcription termination factor, RNA
polymerase II" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006353 "DNA-dependent transcription,
termination" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR010666 Pfam:PF00176 Pfam:PF00271
Pfam:PF06839 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1921294 GO:GO:0005524 GO:GO:0005737 GO:GO:0006355
GO:GO:0008380 GO:GO:0003677 GO:GO:0008270 GO:GO:0006397
GO:GO:0005681 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0006353 EMBL:AL669937
EMBL:AL669872 GeneTree:ENSGT00700000104545 KO:K15173 CTD:8458
HOGENOM:HOG000154708 HOVERGEN:HBG053179 OMA:WCGSIPW
OrthoDB:EOG4GMTWH EMBL:BC087733 EMBL:BC096625 IPI:IPI00112371
RefSeq:NP_001013044.2 UniGene:Mm.270961 ProteinModelPortal:Q5NC05
SMR:Q5NC05 IntAct:Q5NC05 STRING:Q5NC05 PhosphoSite:Q5NC05
PRIDE:Q5NC05 Ensembl:ENSMUST00000076941 GeneID:74044 KEGG:mmu:74044
UCSC:uc008qrb.2 NextBio:339618 Bgee:Q5NC05 Genevestigator:Q5NC05
GermOnline:ENSMUSG00000033222 Uniprot:Q5NC05
Length = 1138
Score = 163 (62.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 33/105 (31%), Positives = 57/105 (54%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y IDGSV ++R +V+ F + +V ++S+ A G+ LT N + ++ WNP +
Sbjct: 1012 YATIDGSVNPKQRMDLVEAFNHSQGPQVMLISLLAGGVGLNLTGGNHLFLLDMHWNPSLE 1071
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA DR +R+GQ+ V+I V + T ++ + L K D+ +
Sbjct: 1072 DQACDRIYRVGQKKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQV 1116
>POMBASE|SPAC17A2.12 [details] [associations]
symbol:rrp1 "ATP-dependent DNA helicase (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IGI]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISM] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISM] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006281 "DNA
repair" evidence=ISO] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=ISM] [GO:0035861
"site of double-strand break" evidence=IDA] [GO:0045005
"maintenance of fidelity involved in DNA-dependent DNA replication"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089
PROSITE:PS51194 SMART:SM00184 SMART:SM00490 PomBase:SPAC17A2.12
Prosite:PS00518 GO:GO:0005829 GO:GO:0005524 EMBL:CU329670
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006338
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004003
GO:GO:0000724 GO:GO:0004842 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0035861 GO:GO:0045005 OrthoDB:EOG4NZZ2M PIR:T37813
RefSeq:NP_594246.1 ProteinModelPortal:O13762 STRING:O13762
EnsemblFungi:SPAC17A2.12.1 GeneID:2542440 KEGG:spo:SPAC17A2.12
OMA:RIRDSEN NextBio:20803497 Uniprot:O13762
Length = 897
Score = 161 (61.7 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 31/89 (34%), Positives = 52/89 (58%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
++R DG++ + +R+ + F + V ++S+ A + G+ LT AN V+ E F+NP I
Sbjct: 768 HVRYDGTMSANQRQKSLHSFNNDKDVLVMLVSLKAGSVGLNLTIANHVILQEPFYNPSIE 827
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADD 89
QA DR HR+GQQ V + + K T ++
Sbjct: 828 DQAIDRVHRLGQQKPVTVYRFITKDTIEE 856
>UNIPROTKB|F1SDB8 [details] [associations]
symbol:CHD1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0006974 GO:GO:0006338
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 GO:GO:0008026 OMA:TCQTIAL
GeneTree:ENSGT00670000098110 EMBL:CU462855
Ensembl:ENSSSCT00000007340 Uniprot:F1SDB8
Length = 905
Score = 161 (61.7 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 39/105 (37%), Positives = 58/105 (55%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y R+DGSV EER + F + F + +LS A G+ LTAA+ V+F + +NP
Sbjct: 395 YERVDGSVRGEERHLAIKNFGQQPIF-IFLLSTRAGGVGMNLTAADTVIFVDSDFNPQND 453
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA RAHRIGQ SV + L+ + T ++ + +KL + + I
Sbjct: 454 LQAAARAHRIGQNKSVKVIRLIGRDTVEEIICRKAASKLKLTNTI 498
>SGD|S000000449 [details] [associations]
symbol:ISW1 "ATPase subunit of imitation-switch (ISWI) class
chromatin remodelers" species:4932 "Saccharomyces cerevisiae"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IGI]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0031491 "nucleosome binding" evidence=IEA;IDA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0030874 "nucleolar chromatin" evidence=IDA] [GO:0000182 "rDNA
binding" evidence=IDA] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IGI] [GO:0070870 "heterochromatin
maintenance involved in chromatin silencing" evidence=IGI;IMP]
[GO:0016587 "Isw1 complex" evidence=IPI] [GO:0006354 "DNA-dependent
transcription, elongation" evidence=IMP;IDA] [GO:0006338 "chromatin
remodeling" evidence=IEA;IGI;IMP;IPI] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0001178 "regulation of transcriptional start site
selection at RNA polymerase II promoter" evidence=IGI] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IGI;IMP] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 SGD:S000000449 GO:GO:0005524 GO:GO:0006200
GO:GO:0045944 EMBL:BK006936 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
GO:GO:0034401 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006363 GO:GO:0006354 GO:GO:0006369
GeneTree:ENSGT00670000098110 GO:GO:0030874 GO:GO:0000182
GO:GO:0001178 GO:GO:0070870 GO:GO:0016587 PDB:2Y9Y PDB:2Y9Z
PDBsum:2Y9Y PDBsum:2Y9Z HOGENOM:HOG000192862 SUPFAM:SSF101224
EMBL:Z36114 PIR:S46122 RefSeq:NP_009804.1 ProteinModelPortal:P38144
SMR:P38144 DIP:DIP-6601N IntAct:P38144 MINT:MINT-614918
STRING:P38144 PaxDb:P38144 PeptideAtlas:P38144 EnsemblFungi:YBR245C
GeneID:852547 KEGG:sce:YBR245C CYGD:YBR245c OMA:LEMITHG
OrthoDB:EOG48SM27 EvolutionaryTrace:P38144 NextBio:971628
Genevestigator:P38144 GermOnline:YBR245C Uniprot:P38144
Length = 1129
Score = 162 (62.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 40/101 (39%), Positives = 55/101 (54%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYED--KFRVAVLSITAANSGITLTAANLVVFAELFWNPG 58
Y RIDGS E+R +D + D KF V +L+ A GI LT+A++VV + WNP
Sbjct: 545 YCRIDGSTAHEDRIQAIDDYNAPDSKKF-VFLLTTRAGGLGINLTSADVVVLYDSDWNPQ 603
Query: 59 ILTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKL 99
QA DRAHRIGQ+ V + LV + ++ + KL
Sbjct: 604 ADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQKL 644
>UNIPROTKB|I3LTT5 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 EMBL:CU695129
Ensembl:ENSSSCT00000027860 Uniprot:I3LTT5
Length = 778
Score = 160 (61.4 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 36/104 (34%), Positives = 56/104 (53%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFR-VAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y R+DG EER+ ++ F + R + +LS A GI L +A++V+ + WNP +
Sbjct: 532 YCRLDGQTPHEEREEAIEAFNVPNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQV 591
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPS 103
QA DRAHRIGQ+ V + L+ T ++ + KL + S
Sbjct: 592 DLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDS 635
>UNIPROTKB|Q9NW36 [details] [associations]
symbol:HELLS "cDNA FLJ10339 fis, clone NT2RM2000740, weakly
similar to POSSIBLE GLOBAL TRANSCRIPTION ACTIVATOR SNF2L"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0004386 EMBL:AL138759 UniGene:Hs.655830
HGNC:HGNC:4861 ChiTaRS:HELLS EMBL:AK001201 IPI:IPI00012073
SMR:Q9NW36 STRING:Q9NW36 Ensembl:ENST00000371327
HOGENOM:HOG000198825 HOVERGEN:HBG072129 Uniprot:Q9NW36
Length = 310
Score = 153 (58.9 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 33/88 (37%), Positives = 49/88 (55%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
+ R+DGS+ ER+ + F + + + ++S A GI LTAA+ V+ + WNP
Sbjct: 79 FSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINLTAADTVIIYDSDWNPQSD 138
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTAD 88
QA+DR HRIGQ V++ LV T D
Sbjct: 139 LQAQDRCHRIGQTKPVVVYRLVTANTID 166
>SGD|S000002742 [details] [associations]
symbol:SWR1 "Swi2/Snf2-related ATPase structural component of
the SWR1 complex" species:4932 "Saccharomyces cerevisiae"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000812 "Swr1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IGI;IMP;IDA] [GO:0005198 "structural molecule
activity" evidence=IMP] [GO:0043486 "histone exchange"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SGD:S000002742 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
GO:GO:0005198 EMBL:BK006938 GO:GO:0006351 GO:GO:0000812
GO:GO:0004386 GO:GO:0043486 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
EMBL:U51032 KO:K11681 HOGENOM:HOG000186095 OrthoDB:EOG49S9FK
PIR:S70099 RefSeq:NP_010621.1 ProteinModelPortal:Q05471 SMR:Q05471
DIP:DIP-2845N IntAct:Q05471 MINT:MINT-1165514 STRING:Q05471
PaxDb:Q05471 EnsemblFungi:YDR334W GeneID:851934 KEGG:sce:YDR334W
CYGD:YDR334w OMA:APGFKVL NextBio:970001 Genevestigator:Q05471
GermOnline:YDR334W Uniprot:Q05471
Length = 1514
Score = 163 (62.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 32/88 (36%), Positives = 52/88 (59%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DG+ E+R+ + ++F + + V +LS + GI LT A+ V+F + WNP +
Sbjct: 1289 YMRLDGATKIEDRQILTERFNTDSRITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMD 1348
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTAD 88
Q +DR HRIGQ V I V++ T +
Sbjct: 1349 KQCQDRCHRIGQTRDVHIYRFVSEHTIE 1376
>UNIPROTKB|H3BU65 [details] [associations]
symbol:CHD2 "Chromodomain-helicase-DNA-binding protein 2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0004386 EMBL:AC013394 HGNC:HGNC:1917
ChiTaRS:CHD2 Ensembl:ENST00000557116 Bgee:H3BU65 Uniprot:H3BU65
Length = 113
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 36/89 (40%), Positives = 49/89 (55%)
Query: 2 IRIDGSVGSEERKSVVDQFQYEDKFRVA-VLSITAANSGITLTAANLVVFAELFWNPGIL 60
+R+DGS+ E RK +D F + +LS A GI L +A+ VV + WNP
Sbjct: 15 LRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQND 74
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADD 89
QA+ RAHRIGQ+ V I LV K T ++
Sbjct: 75 LQAQARAHRIGQKKQVNIYRLVTKGTVEE 103
>ZFIN|ZDB-GENE-040426-892 [details] [associations]
symbol:chd1l "chromodomain helicase DNA binding
protein 1-like" species:7955 "Danio rerio" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0000166 "nucleotide binding" evidence=IEA;ISS] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 InterPro:IPR001357
ZFIN:ZDB-GENE-040426-892 GO:GO:0005524 GO:GO:0005634 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 GO:GO:0006974 GO:GO:0016887
GO:GO:0006338 GO:GO:0004386 SUPFAM:SSF52113 PROSITE:PS50172
HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154 CTD:9557
HOGENOM:HOG000030789 HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV
EMBL:BC050498 IPI:IPI00482841 RefSeq:NP_956607.1 UniGene:Dr.84280
ProteinModelPortal:Q7ZU90 PRIDE:Q7ZU90 GeneID:393283
KEGG:dre:393283 InParanoid:Q7ZU90 NextBio:20814340
ArrayExpress:Q7ZU90 Uniprot:Q7ZU90
Length = 1026
Score = 161 (61.7 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 38/99 (38%), Positives = 57/99 (57%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y R+DGSV EER + F +D F + +LS A G+ LTAA+ V+F + +NP
Sbjct: 379 YERLDGSVRGEERNLAIKNFSTKDVF-IFLLSTKAGGVGMNLTAADTVIFVDGDFNPQND 437
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKL 99
QA RAHRIGQ V + L+ + T ++ ++ ++KL
Sbjct: 438 LQAAARAHRIGQTRPVKVIRLLGRDTIEEIIYSRAVSKL 476
>UNIPROTKB|Q3B7N1 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9913 "Bos taurus" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=ISS] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 GO:GO:0006974 GO:GO:0016887
GO:GO:0006338 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154
GO:GO:0008026 EMBL:BC107534 IPI:IPI00710168 RefSeq:NP_001032909.1
UniGene:Bt.18335 ProteinModelPortal:Q3B7N1 PRIDE:Q3B7N1
GeneID:524787 KEGG:bta:524787 CTD:9557 HOGENOM:HOG000030789
HOVERGEN:HBG077542 InParanoid:Q3B7N1 OrthoDB:EOG4SXNBV
NextBio:20874039 Uniprot:Q3B7N1
Length = 897
Score = 160 (61.4 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 39/105 (37%), Positives = 58/105 (55%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y R+DGSV EER + F + F +LS A G+ LTAA+ V+F + +NP
Sbjct: 392 YERVDGSVRGEERHLAIKNFGQQPIFTF-LLSTRAGGVGMNLTAADTVIFFDSDFNPQND 450
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA RAHRIGQ SV + L+ + T ++ ++ +KL + + I
Sbjct: 451 LQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNTI 495
>CGD|CAL0001763 [details] [associations]
symbol:orf19.1871 species:5476 "Candida albicans" [GO:0000812
"Swr1 complex" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
CGD:CAL0001763 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0016568 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
EMBL:AACQ01000133 EMBL:AACQ01000132 RefSeq:XP_713128.1
RefSeq:XP_713174.1 ProteinModelPortal:Q59U81 STRING:Q59U81
PRIDE:Q59U81 GeneID:3645174 GeneID:3645220 KEGG:cal:CaO19.1871
KEGG:cal:CaO19.9427 KO:K11681 Uniprot:Q59U81
Length = 1641
Score = 163 (62.4 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 33/88 (37%), Positives = 52/88 (59%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DG+ E+R+ + ++F + K V +LS + GI LT A+ V+F + WNP +
Sbjct: 1409 YMRLDGATKIEDRQLLTEKFNRDPKIPVFILSTRSGGLGINLTGADTVIFYDSDWNPAMD 1468
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTAD 88
Q +DR HRIGQ V I V++ T +
Sbjct: 1469 KQCQDRCHRIGQVRDVHIYRFVSEYTIE 1496
>SGD|S000005816 [details] [associations]
symbol:SNF2 "Catalytic subunit of the SWI/SNF chromatin
remodeling complex" species:4932 "Saccharomyces cerevisiae"
[GO:0006261 "DNA-dependent DNA replication" evidence=IMP]
[GO:0016514 "SWI/SNF complex" evidence=IDA;IMP] [GO:0006338
"chromatin remodeling" evidence=IGI;IMP] [GO:0031496 "positive
regulation of mating type switching" evidence=IMP] [GO:0031492
"nucleosomal DNA binding" evidence=IDA] [GO:0042766 "nucleosome
mobilization" evidence=IMP;IDA] [GO:0006302 "double-strand break
repair" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IMP;IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IMP;IDA]
[GO:0044109 "cellular alcohol catabolic process" evidence=IMP]
[GO:0005987 "sucrose catabolic process" evidence=IMP] [GO:0070577
"histone acetyl-lysine binding" evidence=IMP;IDA] [GO:0042148
"strand invasion" evidence=IMP] [GO:0061412 "positive regulation of
transcription from RNA polymerase II promoter in response to amino
acid starvation" evidence=IMP] [GO:0001102 "RNA polymerase II
activating transcription factor binding" evidence=IPI]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00384 SMART:SM00490
SMART:SM00951 SGD:S000005816 GO:GO:0005524 EMBL:BK006948
GO:GO:0006351 GO:GO:0006261 GO:GO:0016514 GO:GO:0006302
GO:GO:0004386 GO:GO:0005987 GO:GO:0042766 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 GeneTree:ENSGT00550000074659 InterPro:IPR014012
PROSITE:PS51204 EMBL:X89633 GO:GO:0008094 HOGENOM:HOG000172362
GO:GO:0031492 RefSeq:NP_014933.3 GeneID:854465 KEGG:sce:YOR290C
KO:K11786 GO:GO:0061412 GO:GO:0042148 OrthoDB:EOG4D565R EMBL:M61703
EMBL:X57837 EMBL:D90459 EMBL:Z75198 EMBL:Z75199 PIR:S15047
RefSeq:NP_014935.3 ProteinModelPortal:P22082 SMR:P22082
DIP:DIP-1150N IntAct:P22082 MINT:MINT-600461 STRING:P22082
PaxDb:P22082 PeptideAtlas:P22082 EnsemblFungi:YOR290C GeneID:854467
KEGG:sce:YOR292C CYGD:YOR290c OMA:HPNFLSK NextBio:976750
Genevestigator:P22082 GermOnline:YOR290C GO:GO:0044109
GO:GO:0031496 Uniprot:P22082
Length = 1703
Score = 163 (62.4 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 35/106 (33%), Positives = 57/106 (53%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYED-KFRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y+R+DG S+ER ++ F D ++ +LS A G+ L A+ V+ + WNP
Sbjct: 1130 YLRLDGHTKSDERSELLRLFNAPDSEYLCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQ 1189
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA+DRAHRIGQ++ V I L+ + ++ + KLD+ +
Sbjct: 1190 DLQAQDRAHRIGQKNEVRILRLITTNSVEEVILERAYKKLDIDGKV 1235
>UNIPROTKB|F1NAD2 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000018 "regulation of
DNA recombination" evidence=IEA] [GO:0000729 "DNA double-strand
break processing" evidence=IEA] [GO:0000792 "heterochromatin"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0035861
"site of double-strand break" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0043596
"nuclear replication fork" evidence=IEA] [GO:0051304 "chromosome
separation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0000018 GeneTree:ENSGT00630000089890
GO:GO:0051304 OMA:KNQRGIQ EMBL:AADN02016061 EMBL:AADN02016062
EMBL:AADN02016063 EMBL:AADN02016064 EMBL:AADN02016065
EMBL:AADN02016066 EMBL:AADN02016067 IPI:IPI00583150
Ensembl:ENSGALT00000016936 Uniprot:F1NAD2
Length = 963
Score = 160 (61.4 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 36/99 (36%), Positives = 56/99 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
YIR+DG +R ++D+F + V +LS A GI LT+AN+V+ ++ NP
Sbjct: 834 YIRLDGKTQISDRIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYND 893
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKL 99
QAEDR HR+GQ V + L++K T ++ + + KL
Sbjct: 894 KQAEDRCHRVGQTREVKVIKLISKGTIEESMLKMNQQKL 932
>DICTYBASE|DDB_G0267638 [details] [associations]
symbol:DDB_G0267638 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 dictyBase:DDB_G0267638 GO:GO:0005524
GO:GO:0003677 EMBL:AAFI02000003 GO:GO:0003682 SUPFAM:SSF46689
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR014012 PROSITE:PS51204 KO:K11320 RefSeq:XP_647182.1
ProteinModelPortal:Q55GK2 EnsemblProtists:DDB0220518 GeneID:8615986
KEGG:ddi:DDB_G0267638 InParanoid:Q55GK2 OMA:ISFEAFA Uniprot:Q55GK2
Length = 3069
Score = 165 (63.1 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 31/89 (34%), Positives = 53/89 (59%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DGS ++R+ + ++F + K + +LS + G+ LT A+ V+F + WNP +
Sbjct: 1422 YLRLDGSTKIDKRQVLTERFNTDPKIFLFILSTRSGGLGLNLTGADTVIFYDTDWNPSMD 1481
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADD 89
QA+DR HRIGQ V I + + T ++
Sbjct: 1482 AQAQDRCHRIGQTREVNIYRFITQHTIEE 1510
>UNIPROTKB|K7GNV1 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
GeneID:100188905 RefSeq:XP_003360492.1 Ensembl:ENSSSCT00000032734
Uniprot:K7GNV1
Length = 1061
Score = 160 (61.4 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 36/104 (34%), Positives = 56/104 (53%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFR-VAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y R+DG EER+ ++ F + R + +LS A GI L +A++V+ + WNP +
Sbjct: 532 YCRLDGQTPHEEREEAIEAFNVPNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQV 591
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPS 103
QA DRAHRIGQ+ V + L+ T ++ + KL + S
Sbjct: 592 DLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDS 635
>UNIPROTKB|Q47YP1 [details] [associations]
symbol:CPS_3404 "Snf2 family protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
RefSeq:YP_270079.1 ProteinModelPortal:Q47YP1 STRING:Q47YP1
GeneID:3519815 KEGG:cps:CPS_3404 PATRIC:21469757
HOGENOM:HOG000294304 BioCyc:CPSY167879:GI48-3433-MONOMER
Uniprot:Q47YP1
Length = 1134
Score = 160 (61.4 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 33/101 (32%), Positives = 61/101 (60%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+++ GS + +R+ VVD+FQ + V ++S+ A G+ LTAA+ V+ + +WNP +
Sbjct: 1008 YVKLTGS--TTKRQEVVDKFQ-RGEVPVFLISLRAGGVGLNLTAADTVIHFDPWWNPAVE 1064
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
QA DRA+RIGQ V + L+ + + ++ + + K ++
Sbjct: 1065 NQATDRAYRIGQNKPVFVYKLIIENSIEEKIQKIQQNKAEL 1105
>TIGR_CMR|CPS_3404 [details] [associations]
symbol:CPS_3404 "Snf2 family protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
RefSeq:YP_270079.1 ProteinModelPortal:Q47YP1 STRING:Q47YP1
GeneID:3519815 KEGG:cps:CPS_3404 PATRIC:21469757
HOGENOM:HOG000294304 BioCyc:CPSY167879:GI48-3433-MONOMER
Uniprot:Q47YP1
Length = 1134
Score = 160 (61.4 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 33/101 (32%), Positives = 61/101 (60%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+++ GS + +R+ VVD+FQ + V ++S+ A G+ LTAA+ V+ + +WNP +
Sbjct: 1008 YVKLTGS--TTKRQEVVDKFQ-RGEVPVFLISLRAGGVGLNLTAADTVIHFDPWWNPAVE 1064
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
QA DRA+RIGQ V + L+ + + ++ + + K ++
Sbjct: 1065 NQATDRAYRIGQNKPVFVYKLIIENSIEEKIQKIQQNKAEL 1105
>ZFIN|ZDB-GENE-091113-61 [details] [associations]
symbol:si:dkey-76p7.6 "si:dkey-76p7.6" species:7955
"Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-091113-61 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000729 GO:GO:0035861 GeneTree:ENSGT00630000089890
EMBL:BX927385 IPI:IPI00901431 Ensembl:ENSDART00000113101
Bgee:E7F1C4 Uniprot:E7F1C4
Length = 954
Score = 159 (61.0 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 36/99 (36%), Positives = 56/99 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y R+DGS +R ++DQF + V +LS A GI LT+AN+V+ ++ NP
Sbjct: 825 YNRLDGSTPMSDRIGLIDQFNTDQDIFVFLLSTRAGGLGINLTSANVVILHDIDCNPYND 884
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKL 99
QAE R HR+GQ +V + L++K + +D + + KL
Sbjct: 885 KQAEGRCHRVGQTKTVKVIKLISKDSIEDTMLRIGERKL 923
>ZFIN|ZDB-GENE-050522-499 [details] [associations]
symbol:smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=ISS] [GO:0000729 "DNA double-strand break
processing" evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050522-499 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 SUPFAM:SSF46934 GO:GO:0000729 HOGENOM:HOG000172362
GO:GO:0035861 GeneTree:ENSGT00630000089890 OMA:KEERYMA
HOVERGEN:HBG055804 EMBL:AL807792 IPI:IPI00492619 UniGene:Dr.3950
ProteinModelPortal:B0R061 Ensembl:ENSDART00000091409
ArrayExpress:B0R061 Bgee:B0R061 Uniprot:B0R061
Length = 972
Score = 159 (61.0 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 35/99 (35%), Positives = 56/99 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DGS ER ++D++ + V +LS A GI L +AN V+ ++ NP
Sbjct: 844 YVRLDGSTPMAERIGLIDKYNTNPEIFVFLLSTRAGGQGINLASANTVILHDIDCNPFND 903
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKL 99
QAEDR HR+GQ +V + L++K + +D + + KL
Sbjct: 904 KQAEDRCHRMGQTRTVQVIKLISKDSIEDCMLRVGQEKL 942
>UNIPROTKB|F1P3Q4 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007420 "brain development" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0016589 "NURF
complex" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0036310 "annealing helicase activity"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044
GO:GO:0016589 GO:GO:0008094 GeneTree:ENSGT00680000100002
SUPFAM:SSF101224 OMA:PMSQKRK EMBL:AADN02013587 EMBL:AADN02013588
IPI:IPI00594974 Ensembl:ENSGALT00000013737 Uniprot:F1P3Q4
Length = 982
Score = 159 (61.0 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 36/104 (34%), Positives = 55/104 (52%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFR-VAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y R+DG EER+ +D F + + + +LS A GI L A++V+ + WNP +
Sbjct: 453 YCRLDGQTPHEEREEAIDTFNAPNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQV 512
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPS 103
QA DRAHRIGQ+ V + L+ T ++ + KL + S
Sbjct: 513 DLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDS 556
>UNIPROTKB|D4A4J2 [details] [associations]
symbol:Smarca2 "Protein Smarca2" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
Pfam:PF08880 PROSITE:PS51194 SMART:SM00490 SMART:SM00592
SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
IPI:IPI00777186 Ensembl:ENSRNOT00000016283 ArrayExpress:D4A4J2
Uniprot:D4A4J2
Length = 1506
Score = 161 (61.7 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 36/106 (33%), Positives = 60/106 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYE-DKFRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y+R+DG+ SE+R +++ +F ++ + +LS A G+ L AA+ VV + WNP
Sbjct: 1100 YLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQ 1159
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA+DRAHRIGQQ+ V + L + ++ + KL+V +
Sbjct: 1160 DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKV 1205
>UNIPROTKB|A5PKK5 [details] [associations]
symbol:SMARCA2 "SMARCA2 protein" species:9913 "Bos taurus"
[GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636
OMA:PQEGMHQ GO:GO:0035887 OrthoDB:EOG418BMJ EMBL:DAAA02022747
EMBL:DAAA02022748 EMBL:DAAA02022749 EMBL:BC142521 IPI:IPI00854472
RefSeq:NP_001092585.1 UniGene:Bt.63204 SMR:A5PKK5 STRING:A5PKK5
Ensembl:ENSBTAT00000035681 GeneID:540904 KEGG:bta:540904
InParanoid:A5PKK5 NextBio:20878906 Uniprot:A5PKK5
Length = 1554
Score = 161 (61.7 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 36/106 (33%), Positives = 60/106 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYE-DKFRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y+R+DG+ SE+R +++ +F ++ + +LS A G+ L AA+ VV + WNP
Sbjct: 1075 YLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQ 1134
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA+DRAHRIGQQ+ V + L + ++ + KL+V +
Sbjct: 1135 DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKV 1180
>UNIPROTKB|E2RKP4 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0071778 "WINAC complex" evidence=IEA]
[GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0045892 GO:GO:0008285
GO:GO:0030308 GO:GO:0045944 GO:GO:0044212 GO:GO:0045111
GO:GO:0000790 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0071778 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0035887
EMBL:AAEX03000600 Ensembl:ENSCAFT00000003206 NextBio:20852013
Uniprot:E2RKP4
Length = 1556
Score = 161 (61.7 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 36/106 (33%), Positives = 60/106 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYE-DKFRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y+R+DG+ SE+R +++ +F ++ + +LS A G+ L AA+ VV + WNP
Sbjct: 1077 YLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQ 1136
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA+DRAHRIGQQ+ V + L + ++ + KL+V +
Sbjct: 1137 DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKV 1182
>UNIPROTKB|F1SJG5 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 OMA:PQEGMHQ GO:GO:0035887
EMBL:CT998562 EMBL:CU062411 Ensembl:ENSSSCT00000005766
Uniprot:F1SJG5
Length = 1556
Score = 161 (61.7 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 36/106 (33%), Positives = 60/106 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYE-DKFRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y+R+DG+ SE+R +++ +F ++ + +LS A G+ L AA+ VV + WNP
Sbjct: 1077 YLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQ 1136
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA+DRAHRIGQQ+ V + L + ++ + KL+V +
Sbjct: 1137 DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKV 1182
>MGI|MGI:1935127 [details] [associations]
symbol:Smarca1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000733 "DNA strand renaturation" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0007420 "brain
development" evidence=ISO;IMP] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016589 "NURF complex" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0036310 "annealing helicase activity" evidence=ISO] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070615 "nucleosome-dependent ATPase activity" evidence=ISO]
[GO:0090537 "CERF complex" evidence=ISO] [GO:2000177 "regulation of
neural precursor cell proliferation" evidence=IGI;IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 MGI:MGI:1935127 GO:GO:0005524 GO:GO:0005634
GO:GO:0045893 GO:GO:0007420 GO:GO:0030182 GO:GO:0003677
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016589 GO:GO:0036310 GO:GO:0008094
GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862 SUPFAM:SSF101224
CTD:6594 HOVERGEN:HBG056329 KO:K11727 EMBL:AF325920 EMBL:AK030741
EMBL:AL671903 EMBL:BC057115 IPI:IPI00314654 IPI:IPI00761324
RefSeq:NP_444353.3 UniGene:Mm.229151 HSSP:Q24368
ProteinModelPortal:Q6PGB8 SMR:Q6PGB8 STRING:Q6PGB8
PhosphoSite:Q6PGB8 PaxDb:Q6PGB8 PRIDE:Q6PGB8
Ensembl:ENSMUST00000077569 Ensembl:ENSMUST00000088973
Ensembl:ENSMUST00000101616 GeneID:93761 KEGG:mmu:93761
UCSC:uc009tbl.2 UCSC:uc009tbm.2 InParanoid:B1AUP6 OrthoDB:EOG44J2H9
NextBio:351647 Bgee:Q6PGB8 Genevestigator:Q6PGB8
GermOnline:ENSMUSG00000031099 Uniprot:Q6PGB8
Length = 1046
Score = 159 (61.0 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 36/104 (34%), Positives = 56/104 (53%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFR-VAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y R+DG EER+ +D F + + + +LS A GI L +A++V+ + WNP +
Sbjct: 533 YSRLDGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQV 592
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPS 103
QA DRAHRIGQ+ V + L+ T ++ + KL + S
Sbjct: 593 DLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDS 636
>UNIPROTKB|J9P5P2 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6595 OMA:PQEGMHQ EMBL:AAEX03000600 RefSeq:XP_850159.1
Ensembl:ENSCAFT00000046362 GeneID:476335 KEGG:cfa:476335
Uniprot:J9P5P2
Length = 1574
Score = 161 (61.7 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 36/106 (33%), Positives = 60/106 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYE-DKFRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y+R+DG+ SE+R +++ +F ++ + +LS A G+ L AA+ VV + WNP
Sbjct: 1077 YLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQ 1136
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA+DRAHRIGQQ+ V + L + ++ + KL+V +
Sbjct: 1137 DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKV 1182
>MGI|MGI:99603 [details] [associations]
symbol:Smarca2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006325 "chromatin organization"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0016514 "SWI/SNF complex"
evidence=ISO;TAS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0071564 "npBAF complex"
evidence=IDA] [GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778
"WINAC complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 MGI:MGI:99603 GO:GO:0005524
GO:GO:0045892 GO:GO:0008285 GO:GO:0007399 GO:GO:0030308
GO:GO:0045944 GO:GO:0044212 GO:GO:0045111 GO:GO:0000790
GO:GO:0071564 GO:GO:0016514 GO:GO:0071565 GO:GO:0004386
GO:GO:0001105 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778 KO:K11647
ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
EMBL:BC075641 IPI:IPI01018407 RefSeq:NP_035546.2 UniGene:Mm.313303
ProteinModelPortal:Q6DIC0 SMR:Q6DIC0 DIP:DIP-48888N STRING:Q6DIC0
PhosphoSite:Q6DIC0 PaxDb:Q6DIC0 PRIDE:Q6DIC0 GeneID:67155
KEGG:mmu:67155 UCSC:uc008hbn.1 InParanoid:Q6DIC0 OrthoDB:EOG418BMJ
NextBio:323746 Bgee:Q6DIC0 Genevestigator:Q6DIC0 Uniprot:Q6DIC0
Length = 1577
Score = 161 (61.7 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 36/106 (33%), Positives = 60/106 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYE-DKFRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y+R+DG+ SE+R +++ +F ++ + +LS A G+ L AA+ VV + WNP
Sbjct: 1098 YLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQ 1157
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA+DRAHRIGQQ+ V + L + ++ + KL+V +
Sbjct: 1158 DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKV 1203
>CGD|CAL0005422 [details] [associations]
symbol:ISW2 species:5476 "Candida albicans" [GO:0001410
"chlamydospore formation" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0071280 "cellular response to copper ion"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0008623 "CHRAC" evidence=IEA] [GO:0060195 "negative regulation
of antisense RNA transcription" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0000183 "chromatin
silencing at rDNA" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0046020 "negative
regulation of transcription from RNA polymerase II promoter by
pheromones" evidence=IEA] [GO:0006348 "chromatin silencing at
telomere" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IEA] [GO:0015616 "DNA translocase activity" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 CGD:CAL0005422 GO:GO:0005524
GO:GO:0001410 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0071280 GO:GO:0035690 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 EMBL:AACQ01000074 GO:GO:0030447 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224 RefSeq:XP_716066.1
ProteinModelPortal:Q5A310 STRING:Q5A310 GeneID:3642235
KEGG:cal:CaO19.7401 Uniprot:Q5A310
Length = 1056
Score = 159 (61.0 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 37/101 (36%), Positives = 56/101 (55%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYED--KFRVAVLSITAANSGITLTAANLVVFAELFWNPG 58
Y RIDGS E+R +D++ D KF + +L+ A GI LT+A++V+ + WNP
Sbjct: 496 YCRIDGSTSHEDRIEAIDEYNAPDSEKF-IFLLTTRAGGLGINLTSADIVILYDSDWNPQ 554
Query: 59 ILTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKL 99
QA DRAHRIGQ+ V + V ++ ++ + KL
Sbjct: 555 ADLQAMDRAHRIGQKKQVKVFRFVTEKAIEEKVLERAAQKL 595
>UNIPROTKB|Q5A310 [details] [associations]
symbol:ISW2 "Putative uncharacterized protein ISW2"
species:237561 "Candida albicans SC5314" [GO:0001410 "chlamydospore
formation" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0071280 "cellular response to copper ion" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 CGD:CAL0005422 GO:GO:0005524
GO:GO:0001410 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0071280 GO:GO:0035690 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 EMBL:AACQ01000074 GO:GO:0030447 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224 RefSeq:XP_716066.1
ProteinModelPortal:Q5A310 STRING:Q5A310 GeneID:3642235
KEGG:cal:CaO19.7401 Uniprot:Q5A310
Length = 1056
Score = 159 (61.0 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 37/101 (36%), Positives = 56/101 (55%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYED--KFRVAVLSITAANSGITLTAANLVVFAELFWNPG 58
Y RIDGS E+R +D++ D KF + +L+ A GI LT+A++V+ + WNP
Sbjct: 496 YCRIDGSTSHEDRIEAIDEYNAPDSEKF-IFLLTTRAGGLGINLTSADIVILYDSDWNPQ 554
Query: 59 ILTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKL 99
QA DRAHRIGQ+ V + V ++ ++ + KL
Sbjct: 555 ADLQAMDRAHRIGQKKQVKVFRFVTEKAIEEKVLERAAQKL 595
>UNIPROTKB|P51531 [details] [associations]
symbol:SMARCA2 "Probable global transcription activator
SNF2L2" species:9606 "Homo sapiens" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0035887 "aortic
smooth muscle cell differentiation" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IDA] [GO:0071564 "npBAF complex"
evidence=ISS] [GO:0071565 "nBAF complex" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0071778 "WINAC
complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IMP] [GO:0006338 "chromatin remodeling"
evidence=TAS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=TAS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0008285 GO:GO:0007399
GO:GO:0005654 GO:GO:0030308 GO:GO:0006338 GO:GO:0000122
GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0071564
GO:GO:0016514 GO:GO:0071565 EMBL:CH471071 GO:GO:0004386
Pathway_Interaction_DB:ar_tf_pathway GO:GO:0001105 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
KO:K11647 ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0008094 EMBL:X72889 EMBL:D26155 EMBL:AL359076 EMBL:AL138755
IPI:IPI00386718 IPI:IPI00514648 PIR:S39580 PIR:S45251
RefSeq:NP_003061.3 RefSeq:NP_620614.2 UniGene:Hs.298990 PDB:2DAT
PDBsum:2DAT ProteinModelPortal:P51531 SMR:P51531 DIP:DIP-29005N
IntAct:P51531 MINT:MINT-1898892 STRING:P51531 PhosphoSite:P51531
DMDM:212276472 PaxDb:P51531 PRIDE:P51531 DNASU:6595
Ensembl:ENST00000349721 Ensembl:ENST00000357248
Ensembl:ENST00000382194 Ensembl:ENST00000382203 GeneID:6595
KEGG:hsa:6595 UCSC:uc003zhc.3 UCSC:uc003zhd.3 CTD:6595
GeneCards:GC09P002005 HGNC:HGNC:11098 HPA:HPA029981 MIM:600014
MIM:601358 neXtProt:NX_P51531 Orphanet:3051 PharmGKB:PA35948
HOGENOM:HOG000172363 HOVERGEN:HBG056636 InParanoid:P51531
OMA:PQEGMHQ PhylomeDB:P51531 EvolutionaryTrace:P51531
GenomeRNAi:6595 NextBio:25649 PMAP-CutDB:P51531 ArrayExpress:P51531
Bgee:P51531 CleanEx:HS_SMARCA2 Genevestigator:P51531
GermOnline:ENSG00000080503 GO:GO:0035887 Uniprot:P51531
Length = 1590
Score = 161 (61.7 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 36/106 (33%), Positives = 60/106 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYE-DKFRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y+R+DG+ SE+R +++ +F ++ + +LS A G+ L AA+ VV + WNP
Sbjct: 1093 YLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQ 1152
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA+DRAHRIGQQ+ V + L + ++ + KL+V +
Sbjct: 1153 DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKV 1198
>RGD|1302988 [details] [associations]
symbol:Smarca2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 2"
species:10116 "Rattus norvegicus" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0016514 "SWI/SNF complex"
evidence=ISO] [GO:0030308 "negative regulation of cell growth"
evidence=ISO] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=ISO] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045111 "intermediate filament cytoskeleton" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=ISO] [GO:0071565 "nBAF
complex" evidence=ISO] [GO:0071778 "WINAC complex" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636
OrthoDB:EOG418BMJ IPI:IPI00464435 EMBL:AY643746
RefSeq:NP_001004446.1 UniGene:Rn.94939 ProteinModelPortal:Q6DUH4
SMR:Q6DUH4 STRING:Q6DUH4 GeneID:361745 KEGG:rno:361745
UCSC:RGD:1302988 InParanoid:Q6DUH4 NextBio:677480
Genevestigator:Q6DUH4 Uniprot:Q6DUH4
Length = 1597
Score = 161 (61.7 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 36/106 (33%), Positives = 60/106 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYE-DKFRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y+R+DG+ SE+R +++ +F ++ + +LS A G+ L AA+ VV + WNP
Sbjct: 1100 YLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQ 1159
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA+DRAHRIGQQ+ V + L + ++ + KL+V +
Sbjct: 1160 DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKV 1205
>UNIPROTKB|E9PTG1 [details] [associations]
symbol:Smarca2 "Protein Smarca2" species:10116 "Rattus
norvegicus" [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071778 "WINAC complex" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OMA:PQEGMHQ GO:GO:0035887 IPI:IPI00464435
Ensembl:ENSRNOT00000016740 ArrayExpress:E9PTG1 Uniprot:E9PTG1
Length = 1597
Score = 161 (61.7 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 36/106 (33%), Positives = 60/106 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYE-DKFRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y+R+DG+ SE+R +++ +F ++ + +LS A G+ L AA+ VV + WNP
Sbjct: 1100 YLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQ 1159
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA+DRAHRIGQQ+ V + L + ++ + KL+V +
Sbjct: 1160 DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKV 1205
>UNIPROTKB|F1NS62 [details] [associations]
symbol:CHD1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0006974 GO:GO:0006338
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
OMA:TCQTIAL GeneTree:ENSGT00670000098110 EMBL:AADN02037964
EMBL:AADN02037962 EMBL:AADN02037963 IPI:IPI00573125
Ensembl:ENSGALT00000024254 Uniprot:F1NS62
Length = 895
Score = 158 (60.7 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 40/105 (38%), Positives = 58/105 (55%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y R+DGSV EER + F + F V +LS A G+ LTAA+ V+F + +NP
Sbjct: 390 YERLDGSVRGEERHLAIKNFGQQPIF-VFLLSTRAGGVGMNLTAADTVIFTDSDFNPQND 448
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA RAHRIGQ V I L+ + T ++ ++ +KL + + I
Sbjct: 449 LQAIARAHRIGQHKPVKIIRLIGRDTVEEIIYRRAASKLRLTNAI 493
>UNIPROTKB|F1MFS2 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9913 "Bos taurus" [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0006974
GO:GO:0006338 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR002589 PROSITE:PS51154 GO:GO:0008026 IPI:IPI00710168
OMA:TCQTIAL GeneTree:ENSGT00670000098110 EMBL:DAAA02007335
Ensembl:ENSBTAT00000027762 Uniprot:F1MFS2
Length = 896
Score = 158 (60.7 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 39/105 (37%), Positives = 57/105 (54%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y R+DGSV EER + F + F LS A G+ LTAA+ V+F + +NP
Sbjct: 392 YERVDGSVRGEERHLAIKNFGQQPIF--TFLSTRAGGVGMNLTAADTVIFFDSDFNPQND 449
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA RAHRIGQ SV + L+ + T ++ ++ +KL + + I
Sbjct: 450 LQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNTI 494
>ASPGD|ASPL0000042729 [details] [associations]
symbol:AN2278 species:162425 "Emericella nidulans"
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194
SMART:SM00297 SMART:SM00490 SMART:SM00951 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 EMBL:BN001307
GO:GO:0004386 EMBL:AACD01000038 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R RefSeq:XP_659882.1
ProteinModelPortal:Q5BB02 STRING:Q5BB02
EnsemblFungi:CADANIAT00008970 GeneID:2875521 KEGG:ani:AN2278.2
OMA:GSDHSSP Uniprot:Q5BB02
Length = 1407
Score = 160 (61.4 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 35/106 (33%), Positives = 58/106 (54%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYED-KFRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y+R+DGS S++R ++ F D ++ +LS A G+ L A+ V+ + WNP
Sbjct: 899 YLRLDGSTKSDDRSDLLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQ 958
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA+DRAHRIGQ++ V I L+ + ++ + KLD+ +
Sbjct: 959 DLQAQDRAHRIGQKNEVRILRLITSNSVEEKILERAQFKLDMDGKV 1004
>ZFIN|ZDB-GENE-060531-56 [details] [associations]
symbol:ercc6l "excision repair cross-complementing
rodent repair deficiency, complementation group 6-like"
species:7955 "Danio rerio" [GO:0016539 "intein-mediated protein
splicing" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0000777
"condensed chromosome kinetochore" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR006141 InterPro:IPR011990
InterPro:IPR019734 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50005
PROSITE:PS50293 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-060531-56 GO:GO:0005524 GO:GO:0051301 GO:GO:0007067
GO:GO:0003677 Gene3D:1.25.40.10 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0000777
GO:GO:0016539 CTD:54821 GeneTree:ENSGT00590000083118
OrthoDB:EOG4FR0RD EMBL:CR391924 EMBL:BX510925 EMBL:BC150168
IPI:IPI00635423 RefSeq:NP_001093563.1 UniGene:Dr.38615
ProteinModelPortal:A2BGR3 Ensembl:ENSDART00000015401
GeneID:100005291 KEGG:dre:100005291 InParanoid:A2BGR3
NextBio:20786618 Bgee:A2BGR3 Uniprot:A2BGR3
Length = 1451
Score = 160 (61.4 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 34/92 (36%), Positives = 55/92 (59%)
Query: 2 IRIDGSVGS-EERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
+R+DG+V ER+ + FQ + ++ + +L+ GITLT AN VV + WNP
Sbjct: 519 LRLDGTVTQLAEREKRISLFQTDKRYTIFLLTTQVGGVGITLTGANRVVIFDPSWNPATD 578
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLW 92
QA DRA+RIGQ ++V+I L+ T ++ ++
Sbjct: 579 AQAVDRAYRIGQTENVIIYRLITCGTVEEKIY 610
>TAIR|locus:2008096 [details] [associations]
symbol:AT1G50410 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006487 "protein N-linked glycosylation"
evidence=RCA] [GO:0006816 "calcium ion transport" evidence=RCA]
[GO:0010413 "glucuronoxylan metabolic process" evidence=RCA]
[GO:0045492 "xylan biosynthetic process" evidence=RCA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00490 Prosite:PS00518 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004386
InterPro:IPR017907 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 HOGENOM:HOG000241058 EMBL:AY039939 EMBL:AY142669
IPI:IPI00533542 RefSeq:NP_564568.1 UniGene:At.15795
ProteinModelPortal:Q94BR5 SMR:Q94BR5 PaxDb:Q94BR5 PRIDE:Q94BR5
EnsemblPlants:AT1G50410.1 GeneID:841463 KEGG:ath:AT1G50410
TAIR:At1g50410 InParanoid:Q94BR5 OMA:EVRVMIM PhylomeDB:Q94BR5
ProtClustDB:CLSN2684720 ArrayExpress:Q94BR5 Genevestigator:Q94BR5
Uniprot:Q94BR5
Length = 981
Score = 158 (60.7 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 33/92 (35%), Positives = 51/92 (55%)
Query: 3 RIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGILTQ 62
R+DG++ R V +F + +V ++S+ A N G+ + AA V+ +L+WNP Q
Sbjct: 855 RLDGTMSLIARDRAVKEFSNDPDVKVMIMSLKAGNLGLNMIAACHVILLDLWWNPTTEDQ 914
Query: 63 AEDRAHRIGQQDSVLIQYLVAKQTADDYLWPL 94
A DRAHRIGQ V + + K T +D + L
Sbjct: 915 AIDRAHRIGQTRPVTVTRITIKNTVEDRILAL 946
>TAIR|locus:2162504 [details] [associations]
symbol:RAD5 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IMP;IDA] [GO:0045003 "double-strand break
repair via synthesis-dependent strand annealing" evidence=IDA]
[GO:0006261 "DNA-dependent DNA replication" evidence=RCA]
[GO:0009294 "DNA mediated transformation" evidence=IMP]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR014905 Pfam:PF00176 Pfam:PF00271 Pfam:PF08797
PROSITE:PS00690 PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184
SMART:SM00490 SMART:SM00910 Prosite:PS00518 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016568 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 EMBL:AB006699 InterPro:IPR017907
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0009294 GO:GO:0045003 KO:K15505 EMBL:AK228695 IPI:IPI00523984
RefSeq:NP_197667.1 UniGene:At.31042 ProteinModelPortal:Q9FNI6
SMR:Q9FNI6 STRING:Q9FNI6 PaxDb:Q9FNI6 PRIDE:Q9FNI6
EnsemblPlants:AT5G22750.1 GeneID:832338 KEGG:ath:AT5G22750
GeneFarm:4640 TAIR:At5g22750 HOGENOM:HOG000029930 InParanoid:Q9FNI6
OMA:KPIMLRR PhylomeDB:Q9FNI6 ProtClustDB:CLSN2686824
Genevestigator:Q9FNI6 GermOnline:AT5G22750 Uniprot:Q9FNI6
Length = 1029
Score = 158 (60.7 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 30/89 (33%), Positives = 52/89 (58%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
++R+DG++ ++R+ V+ +F + V ++S+ A GI LTAA+ + +WNP +
Sbjct: 906 FVRLDGTLSQQQREKVLKEFSEDGSILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVE 965
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADD 89
QA R HRIGQ V I+ + K T ++
Sbjct: 966 EQAVMRIHRIGQTKEVKIRRFIVKGTVEE 994
>UNIPROTKB|E1C2F7 [details] [associations]
symbol:E1C2F7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0016514 "SWI/SNF complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045111 "intermediate filament cytoskeleton" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565
"nBAF complex" evidence=IEA] [GO:0071778 "WINAC complex"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0045892 GO:GO:0008285 GO:GO:0030308 GO:GO:0045944
GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0071564
GO:GO:0016514 GO:GO:0071565 GO:GO:0004386 GO:GO:0001105
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OMA:PQEGMHQ EMBL:AADN02068434 EMBL:AADN02068435 EMBL:AADN02068436
EMBL:AADN02068437 EMBL:AADN02068438 EMBL:AADN02068439
EMBL:AADN02068440 EMBL:AADN02068441 IPI:IPI00583413
Ensembl:ENSGALT00000016528 Uniprot:E1C2F7
Length = 1546
Score = 160 (61.4 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 35/106 (33%), Positives = 60/106 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYE-DKFRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y+R+DG+ SE+R +++ +F ++ + +LS A G+ L AA+ V+ + WNP
Sbjct: 1067 YLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQ 1126
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA+DRAHRIGQQ+ V + L + ++ + KL+V +
Sbjct: 1127 DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKV 1172
>TAIR|locus:2095360 [details] [associations]
symbol:AT3G20010 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0010014 "meristem initiation" evidence=RCA] [GO:0010050
"vegetative phase change" evidence=RCA] [GO:0010073 "meristem
maintenance" evidence=RCA] [GO:0010267 "production of ta-siRNAs
involved in RNA interference" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0031047 "gene silencing by RNA"
evidence=RCA] [GO:0031507 "heterochromatin assembly" evidence=RCA]
[GO:0035196 "production of miRNAs involved in gene silencing by
miRNA" evidence=RCA] [GO:0045787 "positive regulation of cell
cycle" evidence=RCA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089
PROSITE:PS51194 SMART:SM00184 SMART:SM00490 Prosite:PS00518
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004386 InterPro:IPR017907 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AP002050 HSSP:Q99728
HOGENOM:HOG000241058 ProtClustDB:CLSN2684720 IPI:IPI00543291
RefSeq:NP_188635.1 UniGene:At.43523 ProteinModelPortal:Q9LHE4
SMR:Q9LHE4 PaxDb:Q9LHE4 PRIDE:Q9LHE4 EnsemblPlants:AT3G20010.1
GeneID:821539 KEGG:ath:AT3G20010 TAIR:At3g20010 InParanoid:Q9LHE4
OMA:SSAICYE PhylomeDB:Q9LHE4 Genevestigator:Q9LHE4 Uniprot:Q9LHE4
Length = 1047
Score = 158 (60.7 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 33/92 (35%), Positives = 51/92 (55%)
Query: 3 RIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGILTQ 62
R+DG++ R V +F + +V ++S+ A N G+ + AA V+ +L+WNP Q
Sbjct: 921 RLDGTMSLAARDRAVKEFSKKPDVKVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQ 980
Query: 63 AEDRAHRIGQQDSVLIQYLVAKQTADDYLWPL 94
A DRAHRIGQ V + + K T +D + L
Sbjct: 981 AIDRAHRIGQTRPVTVTRITIKDTVEDRILKL 1012
>DICTYBASE|DDB_G0285205 [details] [associations]
symbol:snf2a "SNF2-related protein SNF2a"
species:44689 "Dictyostelium discoideum" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 dictyBase:DDB_G0285205 GO:GO:0005524 GO:GO:0003677
EMBL:AAFI02000075 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K11647 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 RefSeq:XP_638342.2
ProteinModelPortal:Q54NM0 STRING:Q54NM0 PRIDE:Q54NM0
EnsemblProtists:DDB0233441 GeneID:8624967 KEGG:ddi:DDB_G0285205
OMA:HASKHRV Uniprot:Q54NM0
Length = 1604
Score = 160 (61.4 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 36/106 (33%), Positives = 60/106 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDK-FRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
++R+DGS EER +V ++ D F + VLS A G+ L A+ V+ + WNP +
Sbjct: 981 FLRLDGSTKPEERAHLVVEWNRPDSPFWIFVLSTHAGGLGMNLQTADTVIIFDSDWNPQM 1040
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA+DR HRIGQ +SV + L++ + ++ + KL++ + I
Sbjct: 1041 DLQAQDRCHRIGQTNSVSVFRLISANSIEEKILGRATDKLEIDAKI 1086
>WB|WBGene00010061 [details] [associations]
symbol:F54E12.2 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:Z73102 EMBL:Z82271
GeneTree:ENSGT00700000104545 KO:K15173 PIR:T18666
RefSeq:NP_502137.1 ProteinModelPortal:G5EEW5 SMR:G5EEW5
IntAct:G5EEW5 EnsemblMetazoa:F54E12.2.1 EnsemblMetazoa:F54E12.2.2
GeneID:178054 KEGG:cel:CELE_F54E12.2 CTD:178054 WormBase:F54E12.2
OMA:QTCAVTN NextBio:899526 Uniprot:G5EEW5
Length = 1091
Score = 158 (60.7 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 39/106 (36%), Positives = 56/106 (52%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDK-FRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y I G V ++R+ VD F E RV +LS+ A G+ LT N +V +L WNP +
Sbjct: 960 YTSITGQVLVKDRQERVDSFNREKGGARVMLLSLAAGGVGLNLTGGNHLVMVDLHWNPAL 1019
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA DR +R+GQ+ V I LV K T + + L K+ + S +
Sbjct: 1020 EQQAFDRIYRMGQKKDVFIHRLVTKGTIEQRVVMLQKDKVALASSV 1065
>DICTYBASE|DDB_G0280705 [details] [associations]
symbol:DDB_G0280705 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00717
dictyBase:DDB_G0280705 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006357 GO:GO:0003682 EMBL:AAFI02000037
GO:GO:0004003 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
KO:K14437 RefSeq:XP_641133.1 ProteinModelPortal:Q54UZ8
EnsemblProtists:DDB0220644 GeneID:8622691 KEGG:ddi:DDB_G0280705
InParanoid:Q54UZ8 OMA:YPHERID ProtClustDB:CLSZ2846801
Uniprot:Q54UZ8
Length = 2373
Score = 161 (61.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 38/98 (38%), Positives = 52/98 (53%)
Query: 3 RIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANS-GITLTAANLVVFAELFWNPGILT 61
RIDGS+ +R++ +D+F D R L T A GI LTAA+ V+ + WNP
Sbjct: 878 RIDGSIKGNDRQAAIDRFSKPDSDRFVFLLCTRAGGIGINLTAADTVIIFDSDWNPQNDL 937
Query: 62 QAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKL 99
QA+ R HRIGQ V + LV K T + ++ KL
Sbjct: 938 QAQARCHRIGQDKMVKVYRLVTKNTYERLMFDKASKKL 975
>FB|FBgn0002542 [details] [associations]
symbol:lds "lodestar" species:7227 "Drosophila melanogaster"
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=NAS;IDA] [GO:0006353 "DNA-dependent transcription,
termination" evidence=IDA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS;IDA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=ISS] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007143 "female
meiosis" evidence=IMP] [GO:0034454 "microtubule anchoring at
centrosome" evidence=IMP] [GO:0007283 "spermatogenesis"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
EMBL:AE014297 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0007283 GO:GO:0007143 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0034454 GO:GO:0008094 GO:GO:0006353
GeneTree:ENSGT00700000104545 EMBL:X62629 PIR:A40580
RefSeq:NP_524850.2 UniGene:Dm.20310 ProteinModelPortal:P34739
SMR:P34739 DIP:DIP-20026N IntAct:P34739 MINT:MINT-947822
STRING:P34739 PaxDb:P34739 EnsemblMetazoa:FBtr0081758 GeneID:45894
KEGG:dme:Dmel_CG2684 CTD:45894 FlyBase:FBgn0002542
InParanoid:P34739 KO:K15173 OMA:QRHALAW OrthoDB:EOG47M0D4
PhylomeDB:P34739 GenomeRNAi:45894 NextBio:838462 Bgee:P34739
GermOnline:CG2684 Uniprot:P34739
Length = 1061
Score = 157 (60.3 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 32/101 (31%), Positives = 61/101 (60%)
Query: 2 IRIDGSVGSEERKSVVDQFQ-YEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
+ ++G++ + R+ +V++F ++ RV +LS+TA G+ L AN ++ +L WNP +
Sbjct: 936 LSLNGTIPVKNRQDIVNEFNDRNNQKRVLLLSLTAGGVGLNLIGANHLLLLDLHWNPQLE 995
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
QA+DR +R+GQ+ +V+I + T + + L KLD+
Sbjct: 996 AQAQDRIYRVGQKKNVIIYKFMCVDTVEQRIKGLQDKKLDL 1036
>POMBASE|SPCC1620.14c [details] [associations]
symbol:snf22 "ATP-dependent DNA helicase Snf22"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0000991 "core RNA polymerase II binding transcription factor
activity" evidence=ISO] [GO:0003677 "DNA binding" evidence=IC]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISM]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=IGI] [GO:0007131 "reciprocal
meiotic recombination" evidence=IMP] [GO:0010972 "negative
regulation of G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0016514 "SWI/SNF complex" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEP] [GO:1900389 "regulation of glucose import
by regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:1900400 "regulation of iron ion import by
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR014978 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00384
SMART:SM00490 SMART:SM00951 PomBase:SPCC1620.14c GO:GO:0005524
GO:GO:0005819 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003677
GO:GO:0045944 GO:GO:0000122 GO:GO:0000790 GO:GO:0016514
GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0000991 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0007131
InterPro:IPR014012 PROSITE:PS51204 GO:GO:0010972
HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R EMBL:AB162437
PIR:T41628 RefSeq:NP_588472.2 ProteinModelPortal:O94421
DIP:DIP-48377N STRING:O94421 PRIDE:O94421
EnsemblFungi:SPCC1620.14c.1 GeneID:2538881 KEGG:spo:SPCC1620.14c
NextBio:20800061 GO:GO:1900389 GO:GO:1900400 Uniprot:O94421
Length = 1680
Score = 159 (61.0 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 36/106 (33%), Positives = 59/106 (55%)
Query: 1 YIRIDGSVGSEERKSVVDQFQY-EDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y+R+DGS S++R S++ QF + + +LS A G+ L A+ V+ + WNP
Sbjct: 1230 YLRLDGSTKSDDRCSLLAQFNDPKSDVYIFMLSTRAGGLGLNLQTADTVIIFDTDWNPHQ 1289
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA+DRAHRIGQ V I L+ +++ ++ + KLD+ +
Sbjct: 1290 DLQAQDRAHRIGQTKEVRILRLITEKSIEENILSRAQYKLDLDGKV 1335
>WB|WBGene00002169 [details] [associations]
symbol:isw-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040027 "negative regulation of
vulval development" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0040026 "positive regulation of vulval development"
evidence=IGI] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00384 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0016246 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000790 GO:GO:0040035 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 GO:GO:0040027 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GO:GO:0040026 EMBL:FO081312 PIR:S44645
RefSeq:NP_498468.2 ProteinModelPortal:P41877 SMR:P41877
STRING:P41877 PaxDb:P41877 EnsemblMetazoa:F37A4.8 GeneID:175944
KEGG:cel:CELE_F37A4.8 UCSC:F37A4.8 CTD:175944 WormBase:F37A4.8
GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862 InParanoid:P41877
KO:K11654 OMA:MQRKWYK NextBio:890418 SUPFAM:SSF101224
Uniprot:P41877
Length = 1009
Score = 156 (60.0 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 36/101 (35%), Positives = 55/101 (54%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYED--KFRVAVLSITAANSGITLTAANLVVFAELFWNPG 58
Y R+DGS E+R + ++ + D KF + +L+ A GI L A++V+ + WNP
Sbjct: 478 YCRLDGSTPHEDRSNAIEAYNAPDSKKF-IFMLTTRAGGLGINLATADVVIIYDSDWNPQ 536
Query: 59 ILTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKL 99
QA DRAHRIGQ+ V + L+ + T D+ + KL
Sbjct: 537 SDLQAMDRAHRIGQKKQVRVFRLITENTVDERIIEKAEAKL 577
>MGI|MGI:1923501 [details] [associations]
symbol:Ercc6l2 "excision repair cross-complementing rodent
repair deficiency, complementation group 6 like 2" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1923501
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003677
GO:GO:0006281 GO:GO:0005815 HSSP:Q97XQ5 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00590000083118 CTD:375748 HOGENOM:HOG000074171
HOVERGEN:HBG108393 OMA:HGNRKDN EMBL:AK002307 EMBL:AK082850
EMBL:AC154248 EMBL:AF217319 EMBL:BC032964 IPI:IPI00403243
IPI:IPI00754737 IPI:IPI00857027 RefSeq:NP_075996.2
UniGene:Mm.186610 ProteinModelPortal:Q9JIM3 SMR:Q9JIM3 PRIDE:Q9JIM3
Ensembl:ENSMUST00000021926 Ensembl:ENSMUST00000067821 GeneID:76251
KEGG:mmu:76251 UCSC:uc007qyb.2 UCSC:uc007qyc.2 NextBio:344851
Bgee:Q9JIM3 CleanEx:MM_0610007P08RIK Genevestigator:Q9JIM3
Uniprot:Q9JIM3
Length = 699
Score = 154 (59.3 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 32/92 (34%), Positives = 50/92 (54%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y R+DGS SEER +V +F + ++S A G+ AN+V+ + WNP
Sbjct: 549 YRRLDGSTKSEERLKIVKEFNSSQDVNICLVSTMAGGLGLNFVGANVVILFDPTWNPAND 608
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLW 92
QA DRA+RIGQ V + L++ T ++ ++
Sbjct: 609 LQAVDRAYRIGQCRDVKVLRLISLGTVEEIMY 640
>TAIR|locus:2040184 [details] [associations]
symbol:PKL "PICKLE" species:3702 "Arabidopsis thaliana"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003678 "DNA helicase activity" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=IMP] [GO:0009733 "response to
auxin stimulus" evidence=IMP] [GO:2000023 "regulation of lateral
root development" evidence=IMP] [GO:0009788 "negative regulation of
abscisic acid mediated signaling pathway" evidence=IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0016246 "RNA interference" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0009739 "response to gibberellin
stimulus" evidence=IMP] [GO:0048364 "root development"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 Prosite:PS00518 GO:GO:0005524 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733
GO:GO:0046872 GO:GO:0003677 GO:GO:0008283 GO:GO:0008270
GO:GO:0016568 GO:GO:0048364 GO:GO:0009739 GO:GO:0009788
GO:GO:0009736 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOGENOM:HOG000231124 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
EMBL:AF185578 EMBL:AF185577 EMBL:AK229409 IPI:IPI00521160
PIR:T52301 RefSeq:NP_565587.1 UniGene:At.11745
ProteinModelPortal:Q9S775 SMR:Q9S775 STRING:Q9S775 PaxDb:Q9S775
PRIDE:Q9S775 EnsemblPlants:AT2G25170.1 GeneID:817055
KEGG:ath:AT2G25170 TAIR:At2g25170 InParanoid:Q9S775 OMA:NVVMYFG
PhylomeDB:Q9S775 ProtClustDB:CLSN2688404 Genevestigator:Q9S775
GermOnline:AT2G25170 GO:GO:2000023 Uniprot:Q9S775
Length = 1384
Score = 157 (60.3 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 36/100 (36%), Positives = 55/100 (55%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVA-VLSITAANSGITLTAANLVVFAELFWNPGI 59
Y RIDG VG ER+ +D+F ++ + +LS A GI L A+ V+ + WNP
Sbjct: 638 YERIDGKVGGAERQIRIDRFNAKNSNKFCFLLSTRAGGLGINLATADTVIIYDSDWNPHA 697
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKL 99
QA RAHR+GQ + V+I L+ + T ++ + L K+
Sbjct: 698 DLQAMARAHRLGQTNKVMIYRLINRGTIEERMMQLTKKKM 737
>RGD|1309820 [details] [associations]
symbol:Hells "helicase, lymphoid specific" species:10116 "Rattus
norvegicus" [GO:0000775 "chromosome, centromeric region"
evidence=ISO] [GO:0001655 "urogenital system development"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005721 "centromeric heterochromatin"
evidence=ISO] [GO:0006306 "DNA methylation" evidence=ISO]
[GO:0006342 "chromatin silencing" evidence=ISO] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0010216 "maintenance of DNA methylation" evidence=ISO]
[GO:0031508 "centromeric heterochromatin assembly" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:1309820
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216 GO:GO:0006346
GO:GO:0046651 IPI:IPI00768565 PRIDE:F1M8B3
Ensembl:ENSRNOT00000017812 OMA:XVERVEL Uniprot:F1M8B3
Length = 494
Score = 151 (58.2 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 33/88 (37%), Positives = 49/88 (55%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
+ R+DGS+ ER+ + F + + + ++S A GI LTAA+ V+ + WNP
Sbjct: 298 FSRLDGSMSYSEREKNIYSFNTDPEVFLFLVSTRAGGLGINLTAADTVIIYDSDWNPQSD 357
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTAD 88
QA+DR HRIGQ V++ LV T D
Sbjct: 358 LQAQDRCHRIGQTKPVVVYRLVTANTID 385
>TAIR|locus:2116747 [details] [associations]
symbol:PKR2 "PICKLE RELATED 2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 EMBL:CP002687
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI00523018 RefSeq:NP_194918.2 UniGene:At.54572
ProteinModelPortal:F4JTF6 SMR:F4JTF6 PRIDE:F4JTF6
EnsemblPlants:AT4G31900.1 GeneID:829320 KEGG:ath:AT4G31900
OMA:SYWESES ArrayExpress:F4JTF6 Uniprot:F4JTF6
Length = 1202
Score = 156 (60.0 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 35/100 (35%), Positives = 53/100 (53%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVA-VLSITAANSGITLTAANLVVFAELFWNPGI 59
Y RIDG + ER+ +D+F E+ R +LS A GI L A+ V+ + WNP
Sbjct: 567 YERIDGKISGPERQVRIDRFNAENSNRFCFLLSTRAGGIGINLATADTVIIYDSDWNPHA 626
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKL 99
QA R HR+GQ + V+I L+ K T ++ + + K+
Sbjct: 627 DLQAMARVHRLGQTNKVMIYRLIHKGTVEERMMEITKNKM 666
>UNIPROTKB|Q5T890 [details] [associations]
symbol:RAD26L "Putative DNA repair and recombination
protein RAD26-like" species:9606 "Homo sapiens" [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005815
"microtubule organizing center" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0006281
GO:GO:0005815 HSSP:Q97XQ5 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:CH471174 EMBL:AL161454
EMBL:BC035183 EMBL:BC140702 EMBL:AL389953 IPI:IPI00641648
IPI:IPI00873984 RefSeq:NP_001010895.1 UniGene:Hs.432364
UniGene:Hs.732570 ProteinModelPortal:Q5T890 SMR:Q5T890
IntAct:Q5T890 PhosphoSite:Q5T890 DMDM:74756405 PRIDE:Q5T890
DNASU:375748 Ensembl:ENST00000288985 Ensembl:ENST00000426805
Ensembl:ENST00000437817 GeneID:375748 KEGG:hsa:375748
UCSC:uc004avt.4 UCSC:uc010mrz.3 CTD:375748 HGNC:HGNC:26922
neXtProt:NX_Q5T890 PharmGKB:PA134961240 HOGENOM:HOG000074171
HOVERGEN:HBG108393 InParanoid:Q5T890 OMA:HGNRKDN OrthoDB:EOG41G33K
ChiTaRS:ERCC6L2 GenomeRNAi:375748 NextBio:100596
ArrayExpress:Q5T890 Bgee:Q5T890 CleanEx:HS_C9orf102
Genevestigator:Q5T890 Uniprot:Q5T890
Length = 712
Score = 153 (58.9 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 33/92 (35%), Positives = 50/92 (54%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y R+DGS SEER +V +F + ++S A G+ AN+VV + WNP
Sbjct: 562 YRRLDGSTKSEERLKIVKEFNSTQDVNICLVSTMAGGLGLNFVGANVVVLFDPTWNPAND 621
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLW 92
QA DRA+RIGQ V + L++ T ++ ++
Sbjct: 622 LQAIDRAYRIGQCRDVKVLRLISLGTVEEIMY 653
>TAIR|locus:2008470 [details] [associations]
symbol:EDA16 "embryo sac development arrest 16"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0009553
"embryo sac development" evidence=IMP] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00490
Prosite:PS00518 EMBL:CP002684 GO:GO:0005524 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004386 GO:GO:0009553 InterPro:IPR017907 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 IPI:IPI00518434 RefSeq:NP_176309.2
UniGene:At.36526 UniGene:At.68763 ProteinModelPortal:F4HTG1
SMR:F4HTG1 PRIDE:F4HTG1 EnsemblPlants:AT1G61140.1 GeneID:842407
KEGG:ath:AT1G61140 OMA:WADELHK Uniprot:F4HTG1
Length = 1280
Score = 156 (60.0 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 35/98 (35%), Positives = 51/98 (52%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y R+DG++ R V F + V ++S+ AA+ G+ + AA V+ +L+WNP
Sbjct: 1150 YRRLDGTMSVAARDKAVQDFNTLPEVTVMIMSLKAASLGLNMVAACHVLMLDLWWNPTTE 1209
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTK 98
QA DRAHRIGQ V + K T +D + L K
Sbjct: 1210 DQAIDRAHRIGQTRPVTVVRFTVKDTVEDRILALQQKK 1247
>TAIR|locus:2150270 [details] [associations]
symbol:CHR23 "chromatin remodeling 23" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0007062
"sister chromatid cohesion" evidence=RCA] [GO:0007126 "meiosis"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0016571 "histone
methylation" evidence=RCA] [GO:0016579 "protein deubiquitination"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 EMBL:CP002688 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K11647
OMA:WAPSISA IPI:IPI00536400 RefSeq:NP_197432.2 UniGene:At.43995
ProteinModelPortal:F4K128 SMR:F4K128 PRIDE:F4K128
EnsemblPlants:AT5G19310.1 GeneID:832051 KEGG:ath:AT5G19310
PhylomeDB:F4K128 Uniprot:F4K128
Length = 1064
Score = 155 (59.6 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 33/106 (31%), Positives = 60/106 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDK-FRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y+R+DGS +++R ++ QF D + + +LS A G+ L A+ ++ + WNP +
Sbjct: 738 YLRLDGSTKTDQRGILLKQFNEPDSPYFMFLLSTRAGGLGLNLQTADTIIIFDSDWNPQM 797
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QAEDRAHRIGQ+ V + LV+ + ++ + K+ + + +
Sbjct: 798 DQQAEDRAHRIGQKKEVRVFVLVSIGSIEEVILERAKQKMGIDAKV 843
>WB|WBGene00016868 [details] [associations]
symbol:C52B9.8 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:FO080644 PIR:T28937 RefSeq:NP_508736.1
ProteinModelPortal:Q22944 SMR:Q22944 STRING:Q22944 PaxDb:Q22944
EnsemblMetazoa:C52B9.8 GeneID:180705 KEGG:cel:CELE_C52B9.8
UCSC:C52B9.8 CTD:180705 WormBase:C52B9.8 InParanoid:Q22944
NextBio:910548 Uniprot:Q22944
Length = 1336
Score = 156 (60.0 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 34/106 (32%), Positives = 60/106 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYED-KFRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y+R+DGS +ER +++D+F + ++ + +LS A G+ L A+ V+ + WNP
Sbjct: 726 YLRLDGSTKPDERGALLDKFNAPNSEYFLFMLSTRAGGLGLNLQTADTVIIFDSDWNPHQ 785
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA+DRAHRIGQ+ V + L+ + ++ + KL+V +
Sbjct: 786 DMQAQDRAHRIGQKAEVRVFRLITANSVEEKILAAARYKLNVDEKV 831
>ASPGD|ASPL0000065871 [details] [associations]
symbol:AN7538 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 EMBL:AACD01000129 EMBL:BN001304 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
OrthoDB:EOG44XNQX RefSeq:XP_680807.1 ProteinModelPortal:Q5AVZ2
EnsemblFungi:CADANIAT00000644 GeneID:2869681 KEGG:ani:AN7538.2
HOGENOM:HOG000215811 OMA:FMKRRTK Uniprot:Q5AVZ2
Length = 1132
Score = 155 (59.6 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 35/101 (34%), Positives = 57/101 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y R DGS+ ++ R++ +++ + RV + S+ A G+ LTAA+ VV E FWNP +
Sbjct: 942 YARYDGSMRNDLREASLEKLRNHRGTRVLLCSLRAGALGLNLTAASRVVILEPFWNPFVE 1001
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
QA DR HR+ Q V I ++ K T ++ + L K ++
Sbjct: 1002 EQAIDRVHRLNQTVDVKIYKMIIKDTVEERILDLQERKREL 1042
>UNIPROTKB|H0YGM3 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001487 InterPro:IPR001650
Pfam:PF00271 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 EMBL:AC011442
EMBL:AC011485 EMBL:AC006127 HGNC:HGNC:11100 ChiTaRS:SMARCA4
PRIDE:H0YGM3 Ensembl:ENST00000538456 Bgee:H0YGM3 Uniprot:H0YGM3
Length = 427
Score = 149 (57.5 bits), Expect = 8.1e-10, P = 8.1e-10
Identities = 33/106 (31%), Positives = 58/106 (54%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYE-DKFRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y+R+DG+ +E+R ++ F ++ + +LS A G+ L +A+ V+ + WNP
Sbjct: 3 YLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQ 62
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA+DRAHRIGQQ+ V + L + ++ + KL+V +
Sbjct: 63 DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKV 108
>UNIPROTKB|Q9NRZ9 [details] [associations]
symbol:HELLS "Lymphoid-specific helicase" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0001655 "urogenital system development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005721
"centromeric heterochromatin" evidence=ISS] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISS]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0010216 "maintenance of DNA methylation" evidence=ISS]
[GO:0031508 "centromeric heterochromatin assembly" evidence=ISS]
[GO:0000775 "chromosome, centromeric region" evidence=ISS]
[GO:0046651 "lymphocyte proliferation" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0005634 GO:GO:0051301 GO:GO:0007067 GO:GO:0003677
EMBL:CH471066 GO:GO:0006351 GO:GO:0003682 GO:GO:0001655
GO:GO:0004386 GO:GO:0005721 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031508
GO:GO:0010216 GO:GO:0006346 GO:GO:0046651 EMBL:AF155827
EMBL:AB102717 EMBL:AB102718 EMBL:AB102719 EMBL:AB102720
EMBL:AB102721 EMBL:AB102722 EMBL:AK314485 EMBL:AB113249
EMBL:BX538033 EMBL:AL138759 EMBL:BC015477 EMBL:BC029381
EMBL:BC030963 EMBL:BC031004 EMBL:AY007108 EMBL:AB074174
IPI:IPI00010590 IPI:IPI00807418 IPI:IPI00807455 IPI:IPI00807553
IPI:IPI00807574 IPI:IPI00807597 IPI:IPI00807667 IPI:IPI00807698
IPI:IPI00807726 RefSeq:NP_060533.2 UniGene:Hs.655830
ProteinModelPortal:Q9NRZ9 SMR:Q9NRZ9 IntAct:Q9NRZ9 STRING:Q9NRZ9
PhosphoSite:Q9NRZ9 DMDM:74761670 PaxDb:Q9NRZ9 PRIDE:Q9NRZ9
DNASU:3070 Ensembl:ENST00000348459 Ensembl:ENST00000394036
Ensembl:ENST00000394044 Ensembl:ENST00000394045 GeneID:3070
KEGG:hsa:3070 UCSC:uc001kjs.3 UCSC:uc009xul.3 UCSC:uc009xum.3
CTD:3070 GeneCards:GC10P096305 H-InvDB:HIX0017337 HGNC:HGNC:4861
HPA:CAB004491 MIM:603946 neXtProt:NX_Q9NRZ9 PharmGKB:PA35054
HOVERGEN:HBG060049 OrthoDB:EOG4SN1N4 PhylomeDB:Q9NRZ9 ChiTaRS:HELLS
GenomeRNAi:3070 NextBio:12147 ArrayExpress:Q9NRZ9 Bgee:Q9NRZ9
Genevestigator:Q9NRZ9 GermOnline:ENSG00000119969 Uniprot:Q9NRZ9
Length = 838
Score = 153 (58.9 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 33/88 (37%), Positives = 49/88 (55%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
+ R+DGS+ ER+ + F + + + ++S A GI LTAA+ V+ + WNP
Sbjct: 642 FSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINLTAADTVIIYDSDWNPQSD 701
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTAD 88
QA+DR HRIGQ V++ LV T D
Sbjct: 702 LQAQDRCHRIGQTKPVVVYRLVTANTID 729
>UNIPROTKB|F1P5V4 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0001655 "urogenital system development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=IEA] [GO:0010216 "maintenance of DNA
methylation" evidence=IEA] [GO:0031508 "centromeric heterochromatin
assembly" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0046651 "lymphocyte
proliferation" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216 OMA:ETFYTAI
GO:GO:0006346 GO:GO:0046651 GeneTree:ENSGT00550000075106
EMBL:AADN02027839 EMBL:AADN02027838 IPI:IPI00823178
Ensembl:ENSGALT00000008749 ArrayExpress:F1P5V4 Uniprot:F1P5V4
Length = 839
Score = 153 (58.9 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 33/88 (37%), Positives = 50/88 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
+ R+DGS+ +R+ + QF + + + ++S A GI LTAA+ V+ + WNP
Sbjct: 642 FSRLDGSMSYSDREENMHQFNNDPEVFLFLVSTRAGGLGINLTAADTVIIYDSDWNPQSD 701
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTAD 88
QA+DR HRIGQ V++ LV T D
Sbjct: 702 LQAQDRCHRIGQTKPVVVYRLVTANTID 729
>FB|FBgn0032157 [details] [associations]
symbol:Etl1 "Etl1 homologue" species:7227 "Drosophila
melanogaster" [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 EMBL:AE014134 GO:GO:0003677
GO:GO:0006281 GO:GO:0016568 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K14439
GeneTree:ENSGT00630000089890 OMA:KEERYMA EMBL:AY060597
RefSeq:NP_001033889.1 RefSeq:NP_001033890.1 RefSeq:NP_609320.2
UniGene:Dm.3953 ProteinModelPortal:Q9VL72 SMR:Q9VL72 IntAct:Q9VL72
STRING:Q9VL72 PRIDE:Q9VL72 EnsemblMetazoa:FBtr0079901 GeneID:34311
KEGG:dme:Dmel_CG5899 UCSC:CG5899-RA FlyBase:FBgn0032157
InParanoid:Q9VL72 PhylomeDB:Q9VL72 GenomeRNAi:34311 NextBio:787873
Bgee:Q9VL72 Uniprot:Q9VL72
Length = 844
Score = 153 (58.9 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 36/105 (34%), Positives = 56/105 (53%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
+ R+DG+ R+ ++ F +D V +LS A GI LTAA+ V ++ +NP
Sbjct: 695 FCRLDGATAVNVRQDLITDFNGDDSIFVFLLSTKAGGVGINLTAADTCVIHDIDFNPYND 754
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QAEDR HR+GQQ V I L+++ T ++ + KL + I
Sbjct: 755 KQAEDRCHRMGQQRPVTIYRLISESTIEEGILMAAEEKLKLEKDI 799
>ZFIN|ZDB-GENE-030131-9923 [details] [associations]
symbol:hells "helicase, lymphoid-specific"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0045132 "meiotic chromosome segregation"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR011515 Pfam:PF00176 Pfam:PF00271
Pfam:PF07557 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-030131-9923 GO:GO:0005524 GO:GO:0005634 GO:GO:0000775
GO:GO:0003677 GO:GO:0004386 GO:GO:0045132 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 CTD:3070 HOVERGEN:HBG060049
EMBL:AY612850 IPI:IPI00817585 RefSeq:NP_001032178.1
UniGene:Dr.75180 ProteinModelPortal:Q3BDS6 STRING:Q3BDS6
GeneID:553328 KEGG:dre:553328 InParanoid:Q3BDS6 NextBio:20880094
ArrayExpress:Q3BDS6 Uniprot:Q3BDS6
Length = 853
Score = 153 (58.9 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 32/89 (35%), Positives = 50/89 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y R+DGS+ +R + +F + + + +LS A GI LT+A+ V+ + WNP
Sbjct: 658 YSRLDGSMSYADRDENMKKFSSDPEVFLFLLSTRAGGLGINLTSADTVIIFDSDWNPQAD 717
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADD 89
QA+DR HRIGQ V++ L+ T D+
Sbjct: 718 LQAQDRCHRIGQTKPVVVHRLITANTIDE 746
>ZFIN|ZDB-GENE-070705-296 [details] [associations]
symbol:si:dkey-148b12.1 "si:dkey-148b12.1"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 ZFIN:ZDB-GENE-070705-296 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 HOVERGEN:HBG056329 KO:K11727 OrthoDB:EOG44J2H9
EMBL:CR848717 EMBL:CU104724 IPI:IPI00488326 RefSeq:NP_001093467.1
UniGene:Dr.81160 SMR:A5WUY4 Ensembl:ENSDART00000020725
GeneID:559803 KEGG:dre:559803 OMA:IGHAWIN NextBio:20883144
Uniprot:A5WUY4
Length = 1036
Score = 154 (59.3 bits), Expect = 8.8e-10, P = 8.8e-10
Identities = 35/104 (33%), Positives = 55/104 (52%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFR-VAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y R+DG+ E R+ +D F + + + +LS A GI L A++V+ + WNP +
Sbjct: 488 YCRLDGNTPHEAREQAIDAFNAPNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQV 547
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPS 103
QA DRAHRIGQ+ V + L+ T ++ + KL + S
Sbjct: 548 DLQAMDRAHRIGQRKPVKVFRLITDNTVEERIVERAEMKLRLDS 591
>TAIR|locus:2182978 [details] [associations]
symbol:CHR17 "chromatin remodeling factor17" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005829 "cytosol" evidence=RCA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] [GO:0006259 "DNA metabolic
process" evidence=RCA] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0016246 "RNA interference" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0031047
"gene silencing by RNA" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=IGI] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 EMBL:CP002688 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 GO:GO:0010228 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 KO:K11654 OMA:MQRKWYK SUPFAM:SSF101224
IPI:IPI00547773 RefSeq:NP_850847.1 UniGene:At.19176
ProteinModelPortal:F4JY25 SMR:F4JY25 IntAct:F4JY25 PRIDE:F4JY25
EnsemblPlants:AT5G18620.2 GeneID:831980 KEGG:ath:AT5G18620
PhylomeDB:F4JY25 Uniprot:F4JY25
Length = 1072
Score = 154 (59.3 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 1 YIRIDGSVGSEERKSVVDQFQY--EDKFRVAVLSITAANSGITLTAANLVVFAELFWNPG 58
Y RIDG+ G +ER + ++ + +KF V +LS A GI L A++V+ + WNP
Sbjct: 538 YCRIDGNTGGDERDASIEAYNKPGSEKF-VFLLSTRAGGLGINLATADVVILYDSDWNPQ 596
Query: 59 ILTQAEDRAHRIGQQDSVLI 78
+ QA+DRAHRIGQ+ V +
Sbjct: 597 VDLQAQDRAHRIGQKKEVQV 616
>UNIPROTKB|E1C366 [details] [associations]
symbol:TTF2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR010666
Pfam:PF00176 Pfam:PF00271 Pfam:PF06839 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104545 EMBL:AADN02032807 IPI:IPI00602086
Ensembl:ENSGALT00000024603 Uniprot:E1C366
Length = 1150
Score = 154 (59.3 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 33/99 (33%), Positives = 55/99 (55%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKF-RVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y +DGSV ++R VV++F K +V ++S+ A G+ LT N + ++ WNP +
Sbjct: 1024 YSMLDGSVNPKQRMDVVEEFNNNPKGPQVMLVSLLAGGVGLNLTGGNHLFLLDMHWNPAL 1083
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTK 98
QA DR +R+GQ+ V+I V + T ++ + L K
Sbjct: 1084 EDQACDRIYRVGQKKDVVIHRFVCEGTVEEKILQLQTRK 1122
>UNIPROTKB|E1C1L9 [details] [associations]
symbol:TTF2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR010666 Pfam:PF00176 Pfam:PF00271 Pfam:PF06839
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0008270 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104545 OMA:WCGSIPW EMBL:AADN02032807
IPI:IPI00821328 Ensembl:ENSGALT00000036922 Uniprot:E1C1L9
Length = 1167
Score = 154 (59.3 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 33/99 (33%), Positives = 55/99 (55%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKF-RVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y +DGSV ++R VV++F K +V ++S+ A G+ LT N + ++ WNP +
Sbjct: 1041 YSMLDGSVNPKQRMDVVEEFNNNPKGPQVMLVSLLAGGVGLNLTGGNHLFLLDMHWNPAL 1100
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTK 98
QA DR +R+GQ+ V+I V + T ++ + L K
Sbjct: 1101 EDQACDRIYRVGQKKDVVIHRFVCEGTVEEKILQLQTRK 1139
>UNIPROTKB|E1BCV0 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046651 "lymphocyte proliferation" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001655 "urogenital system
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216
OMA:ETFYTAI GO:GO:0006346 GO:GO:0046651
GeneTree:ENSGT00550000075106 EMBL:DAAA02058849 EMBL:DAAA02058850
EMBL:DAAA02058851 IPI:IPI00710948 Ensembl:ENSBTAT00000007848
Uniprot:E1BCV0
Length = 816
Score = 152 (58.6 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 33/88 (37%), Positives = 48/88 (54%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
+ R+DGS+ ER+ + F + + ++S A GI LTAA+ V+ + WNP
Sbjct: 620 FSRLDGSMSYSEREKNIHSFNTDPDVFIFLVSTRAGGLGINLTAADTVIIYDSDWNPQSD 679
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTAD 88
QA+DR HRIGQ V++ LV T D
Sbjct: 680 LQAQDRCHRIGQTRPVVVYRLVTANTID 707
>WB|WBGene00010845 [details] [associations]
symbol:M03C11.8 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0003677 GO:GO:0006281 GO:GO:0016568 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K14439
GeneTree:ENSGT00630000089890 EMBL:Z49128 EMBL:AL021171 PIR:T23046
RefSeq:NP_499301.2 ProteinModelPortal:G5EDG2 SMR:G5EDG2
EnsemblMetazoa:M03C11.8 GeneID:176462 KEGG:cel:CELE_M03C11.8
WormBase:M03C11.8 OMA:KEERYMA NextBio:892680 Uniprot:G5EDG2
Length = 989
Score = 153 (58.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 35/105 (33%), Positives = 57/105 (54%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y R+DG +R+ ++++F V +LS A GI LT+AN ++ ++ +NP
Sbjct: 796 YKRLDGQTPVLDRQEMINEFNLSKDLFVFLLSTRAGGLGINLTSANHIIIHDIDFNPYND 855
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QAEDR HR+GQ+ V + LV+K T + + L KL + +
Sbjct: 856 KQAEDRCHRMGQEKPVHVTRLVSKGTVEVGMLALAKKKLQLEKQV 900
>DICTYBASE|DDB_G0272082 [details] [associations]
symbol:DDB_G0272082 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089
PROSITE:PS51194 SMART:SM00184 SMART:SM00490 dictyBase:DDB_G0272082
Prosite:PS00518 GO:GO:0005524 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 EMBL:AAFI02000007 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 InterPro:IPR017907 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
RefSeq:XP_001732968.1 EnsemblProtists:DDB0233429 GeneID:8618298
KEGG:ddi:DDB_G0272082 Uniprot:B0G105
Length = 1838
Score = 156 (60.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 32/102 (31%), Positives = 62/102 (60%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
++R+DG + ++R+ + +F+ E ++ ++SI A G+ L AA+ V + +WNP
Sbjct: 1715 FVRLDGKIPQKQREVAIKRFKEEPNVKIFLISIKAGGLGLNLVAASHVFLMDPWWNPSTE 1774
Query: 61 TQAEDRAHRIGQQDSV-LIQYLVAKQTADDYLWPLVMTKLDV 101
QA DR +RIGQ +V +I++L+ K + ++ + L +K D+
Sbjct: 1775 EQAIDRVYRIGQNKNVNVIRFLI-KDSIEERILNLQKSKKDL 1815
>WB|WBGene00020742 [details] [associations]
symbol:T23H2.3 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104545 KO:K15173 EMBL:FO081319
RefSeq:NP_001032980.2 ProteinModelPortal:P91494 PaxDb:P91494
EnsemblMetazoa:T23H2.3 GeneID:172347 KEGG:cel:CELE_T23H2.3
UCSC:T23H2.3 CTD:172347 WormBase:T23H2.3 HOGENOM:HOG000017261
InParanoid:P91494 OMA:GHNYTSI NextBio:875145 Uniprot:P91494
Length = 1001
Score = 153 (58.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 36/106 (33%), Positives = 56/106 (52%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDK-FRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y I G V ++R+ VD F E +V +LS+TA G+ L N ++ +L WNP +
Sbjct: 866 YTSITGQVLVKDRQERVDSFNQEKGGAQVMLLSLTAGGVGLNLIGGNHLIMVDLHWNPAL 925
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA DR +R+GQ+ V I L+ K T + + L KL + + +
Sbjct: 926 EQQACDRIYRMGQKKEVFIHRLIVKGTIEQRVMDLQEKKLALAASV 971
>ASPGD|ASPL0000017334 [details] [associations]
symbol:AN3811 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 EMBL:BN001302
EMBL:AACD01000061 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 RefSeq:XP_661415.1
ProteinModelPortal:Q5B6L9 EnsemblFungi:CADANIAT00004901
GeneID:2873228 KEGG:ani:AN3811.2 HOGENOM:HOG000183446 OMA:CRIGLTG
OrthoDB:EOG4R539X Uniprot:Q5B6L9
Length = 1016
Score = 153 (58.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 33/89 (37%), Positives = 54/89 (60%)
Query: 4 IDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGILTQA 63
+DGS+ E R VVD+F + + V ++S A G+ +T+AN VV + WNP QA
Sbjct: 670 LDGSMTYETRAKVVDEFNSDPRQFVFLISTRAGGVGLNITSANKVVIVDPNWNPSHDLQA 729
Query: 64 EDRAHRIGQQDSVLIQYLVAKQTADDYLW 92
+DRA+RIGQ +V + L++ T ++ ++
Sbjct: 730 QDRAYRIGQTRNVEVFRLISAGTIEEIVY 758
>CGD|CAL0000801 [details] [associations]
symbol:orf19.1720 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0006312 "mitotic
recombination" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
CGD:CAL0000801 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
EMBL:AACQ01000014 EMBL:AACQ01000013 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 RefSeq:XP_721671.1
RefSeq:XP_721791.1 ProteinModelPortal:Q5AJ72 GeneID:3636620
GeneID:3636670 KEGG:cal:CaO19.1720 KEGG:cal:CaO19.9288
Uniprot:Q5AJ72
Length = 864
Score = 152 (58.6 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 35/89 (39%), Positives = 48/89 (53%)
Query: 3 RIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGILTQ 62
R+DGS + R + QF KF+V + S A GI L AA+ V+ + WNP + Q
Sbjct: 659 RLDGSTNHQIRDEQISQFNNNPKFKVFLSSTRAGGLGINLVAADTVILMDNDWNPQMDLQ 718
Query: 63 AEDRAHRIGQQDSVLIQYLVAKQTADDYL 91
A DR HRIGQ + V I V K + ++ L
Sbjct: 719 AIDRVHRIGQINPVKIFRFVIKDSIEEVL 747
>UNIPROTKB|Q5AJ72 [details] [associations]
symbol:CaO19.1720 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 CGD:CAL0000801 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 EMBL:AACQ01000014 EMBL:AACQ01000013 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 RefSeq:XP_721671.1
RefSeq:XP_721791.1 ProteinModelPortal:Q5AJ72 GeneID:3636620
GeneID:3636670 KEGG:cal:CaO19.1720 KEGG:cal:CaO19.9288
Uniprot:Q5AJ72
Length = 864
Score = 152 (58.6 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 35/89 (39%), Positives = 48/89 (53%)
Query: 3 RIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGILTQ 62
R+DGS + R + QF KF+V + S A GI L AA+ V+ + WNP + Q
Sbjct: 659 RLDGSTNHQIRDEQISQFNNNPKFKVFLSSTRAGGLGINLVAADTVILMDNDWNPQMDLQ 718
Query: 63 AEDRAHRIGQQDSVLIQYLVAKQTADDYL 91
A DR HRIGQ + V I V K + ++ L
Sbjct: 719 AIDRVHRIGQINPVKIFRFVIKDSIEEVL 747
>UNIPROTKB|Q8EGF3 [details] [associations]
symbol:SO_1651 "Helicase/SNF2 family domain protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR007527 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50966
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0008270 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
HOGENOM:HOG000294304 RefSeq:NP_717262.2 ProteinModelPortal:Q8EGF3
GeneID:1169445 KEGG:son:SO_1651 PATRIC:23522939 OMA:SSSHIEF
ProtClustDB:CLSK906361 Uniprot:Q8EGF3
Length = 1096
Score = 153 (58.9 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 33/89 (37%), Positives = 55/89 (61%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y ++ G + R+ +D+FQ D V ++S+ A +G+ LTAA+ V+ + +WNP
Sbjct: 974 YSKLTGQ--TRLRQVQIDKFQEGDT-PVFLISLKAGGTGLNLTAADTVIHYDPWWNPAAE 1030
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADD 89
QA DRAHRIGQ++ V + L+A+ T ++
Sbjct: 1031 RQATDRAHRIGQENPVFVYKLIAEGTVEE 1059
>TIGR_CMR|SO_1651 [details] [associations]
symbol:SO_1651 "Snf2 family protein" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR007527
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50966 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0008270
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
HOGENOM:HOG000294304 RefSeq:NP_717262.2 ProteinModelPortal:Q8EGF3
GeneID:1169445 KEGG:son:SO_1651 PATRIC:23522939 OMA:SSSHIEF
ProtClustDB:CLSK906361 Uniprot:Q8EGF3
Length = 1096
Score = 153 (58.9 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 33/89 (37%), Positives = 55/89 (61%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y ++ G + R+ +D+FQ D V ++S+ A +G+ LTAA+ V+ + +WNP
Sbjct: 974 YSKLTGQ--TRLRQVQIDKFQEGDT-PVFLISLKAGGTGLNLTAADTVIHYDPWWNPAAE 1030
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADD 89
QA DRAHRIGQ++ V + L+A+ T ++
Sbjct: 1031 RQATDRAHRIGQENPVFVYKLIAEGTVEE 1059
>UNIPROTKB|G5E5P9 [details] [associations]
symbol:LOC789977 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00590000083118 OMA:HGNRKDN EMBL:DAAA02024017
EMBL:DAAA02024018 EMBL:DAAA02024019 EMBL:DAAA02024020
EMBL:DAAA02024021 EMBL:DAAA02024022 Ensembl:ENSBTAT00000027486
Uniprot:G5E5P9
Length = 908
Score = 152 (58.6 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 33/92 (35%), Positives = 50/92 (54%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y R+DGS SEER +V +F + ++S A G+ AN+VV + WNP
Sbjct: 488 YRRLDGSTKSEERIKIVKEFNSTQDVNICLVSTMAGGLGLNFVGANVVVLFDPTWNPAND 547
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLW 92
QA DRA+RIGQ V + L++ T ++ ++
Sbjct: 548 LQAIDRAYRIGQCRDVKVLRLISLGTVEEIMY 579
>UNIPROTKB|F1S4L1 [details] [associations]
symbol:ERCC6L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00590000083118 OMA:HGNRKDN EMBL:CU855584
Ensembl:ENSSSCT00000011974 Uniprot:F1S4L1
Length = 928
Score = 152 (58.6 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 33/92 (35%), Positives = 50/92 (54%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y R+DGS SEER +V +F + ++S A G+ AN+VV + WNP
Sbjct: 485 YRRLDGSTKSEERIKIVKEFNSTQDVNICLVSTMAGGLGLNFVGANVVVLFDPTWNPAND 544
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLW 92
QA DRA+RIGQ V + L++ T ++ ++
Sbjct: 545 LQAIDRAYRIGQCRDVKVLRLISLGTVEEIMY 576
>UNIPROTKB|E2QW28 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 OMA:ETFYTAI
GeneTree:ENSGT00550000075106 EMBL:AAEX03015428
Ensembl:ENSCAFT00000012889 Uniprot:E2QW28
Length = 839
Score = 151 (58.2 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 33/88 (37%), Positives = 48/88 (54%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
+ R+DGS+ ER+ + F + + ++S A GI LTAA+ V+ + WNP
Sbjct: 643 FSRLDGSMSYSEREKNMHSFNTDPDVFIFLVSTRAGGLGINLTAADTVIIYDSDWNPQSD 702
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTAD 88
QA+DR HRIGQ V++ LV T D
Sbjct: 703 LQAQDRCHRIGQTKPVVVYRLVTANTID 730
>UNIPROTKB|E2RGN3 [details] [associations]
symbol:ERCC6L2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00590000083118
EMBL:AAEX03000489 Ensembl:ENSCAFT00000001890 Uniprot:E2RGN3
Length = 925
Score = 151 (58.2 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 33/92 (35%), Positives = 50/92 (54%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y R+DGS SEER +V +F + ++S A G+ AN+VV + WNP
Sbjct: 489 YRRLDGSTKSEERIKIVKEFNSTQDVNICLVSTMAGGVGLNFVGANVVVLFDPTWNPAND 548
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLW 92
QA DRA+RIGQ V + L++ T ++ ++
Sbjct: 549 LQAIDRAYRIGQCRDVKVFRLISLGTVEEIMY 580
>UNIPROTKB|G4NCV5 [details] [associations]
symbol:MGG_01012 "ISWI chromatin-remodeling complex ATPase
ISW2" species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 EMBL:CM001235 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
SUPFAM:SSF101224 RefSeq:XP_003717932.1 EnsemblFungi:MGG_01012T0
GeneID:2674262 KEGG:mgr:MGG_01012 Uniprot:G4NCV5
Length = 1128
Score = 152 (58.6 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 36/101 (35%), Positives = 53/101 (52%)
Query: 1 YIRIDGSVGSEERKSVVDQFQY--EDKFRVAVLSITAANSGITLTAANLVVFAELFWNPG 58
Y RIDG E+R + +D++ +KF V +L+ A GI LT A++V+ + WNP
Sbjct: 533 YSRIDGGTAHEDRIAAIDEYNKPGSEKF-VFLLTTRAGGLGINLTTADIVILFDSDWNPQ 591
Query: 59 ILTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKL 99
QA DRAHRIGQ V + + T ++ + KL
Sbjct: 592 ADLQAMDRAHRIGQTKQVYVYRFLVDNTIEEKVLERAAQKL 632
>SGD|S000000966 [details] [associations]
symbol:CHD1 "Chromatin remodeler that regulates various
aspects of transcription" species:4932 "Saccharomyces cerevisiae"
[GO:0030874 "nucleolar chromatin" evidence=IDA] [GO:0042766
"nucleosome mobilization" evidence=IDA] [GO:0000182 "rDNA binding"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0046695 "SLIK (SAGA-like)
complex" evidence=IDA] [GO:0000124 "SAGA complex" evidence=IDA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IGI;IMP] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IDA] [GO:0001178 "regulation of transcriptional start site
selection at RNA polymerase II promoter" evidence=IGI] [GO:2000616
"negative regulation of histone H3-K9 acetylation" evidence=IMP]
[GO:0071441 "negative regulation of histone H3-K14 acetylation"
evidence=IMP] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IGI;IPI] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0031490 "chromatin DNA binding"
evidence=IDA] [GO:0016584 "nucleosome positioning"
evidence=IGI;IDA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0006369 "termination of RNA polymerase II transcription"
evidence=IGI;IMP] [GO:0071894 "histone H2B conserved C-terminal
lysine ubiquitination" evidence=IMP] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0035064 "methylated histone residue binding" evidence=IDA]
[GO:2000104 "negative regulation of DNA-dependent DNA replication"
evidence=IGI] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IGI] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SGD:S000000966 Pfam:PF00385 GO:GO:0005739
GO:GO:0005524 GO:GO:2000104 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:BK006939 GO:GO:0000124 GO:GO:0046695 GO:GO:0004386
GO:GO:0034401 GO:GO:0006368 GO:GO:0035064 GO:GO:0031490
GO:GO:0042766 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
GO:GO:0016584 EMBL:U18917 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 GO:GO:0006363 GO:GO:0008094 GO:GO:0006369
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
KO:K11367 HOGENOM:HOG000207917 PIR:S30818 RefSeq:NP_011091.1
PDB:2DY7 PDB:2DY8 PDB:2H1E PDB:2XB0 PDB:3MWY PDB:3TED PDBsum:2DY7
PDBsum:2DY8 PDBsum:2H1E PDBsum:2XB0 PDBsum:3MWY PDBsum:3TED
ProteinModelPortal:P32657 SMR:P32657 DIP:DIP-6362N IntAct:P32657
MINT:MINT-618890 STRING:P32657 PaxDb:P32657 PeptideAtlas:P32657
EnsemblFungi:YER164W GeneID:856911 KEGG:sce:YER164W CYGD:YER164w
OMA:IKWQFMA OrthoDB:EOG4TF3TB SABIO-RK:P32657
EvolutionaryTrace:P32657 NextBio:983353 Genevestigator:P32657
GermOnline:YER164W GO:GO:0030874 GO:GO:0000182 GO:GO:0071441
GO:GO:2000616 GO:GO:0001178 Uniprot:P32657
Length = 1468
Score = 153 (58.9 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 36/88 (40%), Positives = 51/88 (57%)
Query: 3 RIDGSVGSEERKSVVDQFQYEDKFR-VAVLSITAANSGITLTAANLVVFAELFWNPGILT 61
R+DG+V S +R+ +D F D V +LS A GI L A+ VV + WNP
Sbjct: 740 RLDGTVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADL 799
Query: 62 QAEDRAHRIGQQDSVLIQYLVAKQTADD 89
QA RAHRIGQ++ V++ LV+K T ++
Sbjct: 800 QAMARAHRIGQKNHVMVYRLVSKDTVEE 827
>UNIPROTKB|F1PQX1 [details] [associations]
symbol:ERCC6L2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00590000083118
EMBL:AAEX03000489 Ensembl:ENSCAFT00000001906 OMA:QSSQPCT
Uniprot:F1PQX1
Length = 995
Score = 151 (58.2 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 33/92 (35%), Positives = 50/92 (54%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y R+DGS SEER +V +F + ++S A G+ AN+VV + WNP
Sbjct: 551 YRRLDGSTKSEERIKIVKEFNSTQDVNICLVSTMAGGVGLNFVGANVVVLFDPTWNPAND 610
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLW 92
QA DRA+RIGQ V + L++ T ++ ++
Sbjct: 611 LQAIDRAYRIGQCRDVKVFRLISLGTVEEIMY 642
>UNIPROTKB|F1SC64 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046651 "lymphocyte proliferation" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001655 "urogenital system
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216
OMA:ETFYTAI GO:GO:0006346 GO:GO:0046651
GeneTree:ENSGT00550000075106 EMBL:CU468514
Ensembl:ENSSSCT00000011474 Uniprot:F1SC64
Length = 838
Score = 150 (57.9 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 33/88 (37%), Positives = 48/88 (54%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
+ R+DGS+ ER+ + F + + ++S A GI LTAA+ V+ + WNP
Sbjct: 642 FSRLDGSMSYTEREKNMHSFNTDPDVFIFLVSTRAGGLGINLTAADTVIIYDSDWNPQSD 701
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTAD 88
QA+DR HRIGQ V++ LV T D
Sbjct: 702 LQAQDRCHRIGQTKPVVVYRLVTANTID 729
>FB|FBgn0011604 [details] [associations]
symbol:Iswi "Imitation SWI" species:7227 "Drosophila
melanogaster" [GO:0006338 "chromatin remodeling"
evidence=ISS;NAS;TAS] [GO:0016589 "NURF complex"
evidence=NAS;IDA;TAS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IGI;IDA] [GO:0000166 "nucleotide binding"
evidence=TAS] [GO:0016584 "nucleosome positioning" evidence=IDA]
[GO:0006334 "nucleosome assembly" evidence=IDA] [GO:0016590 "ACF
complex" evidence=NAS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0008623 "CHRAC"
evidence=NAS;IDA;TAS] [GO:0006333 "chromatin assembly or
disassembly" evidence=IDA;TAS] [GO:0042766 "nucleosome
mobilization" evidence=IDA;TAS] [GO:0016887 "ATPase activity"
evidence=NAS] [GO:0035060 "brahma complex" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0006351 "transcription,
DNA-dependent" evidence=IDA] [GO:0005667 "transcription factor
complex" evidence=IPI] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035076 "ecdysone
receptor-mediated signaling pathway" evidence=IGI] [GO:0007517
"muscle organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0042752 "regulation of circadian
rhythm" evidence=IMP] [GO:0006325 "chromatin organization"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0031213 "RSF complex"
evidence=IPI] [GO:0005700 "polytene chromosome" evidence=IDA]
[GO:0070615 "nucleosome-dependent ATPase activity" evidence=IDA]
[GO:0035063 "nuclear speck organization" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 EMBL:AE013599 GO:GO:0005524
GO:GO:0045892 GO:GO:0003677 GO:GO:0045944 GO:GO:0006351
GO:GO:0042752 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0048813 GO:GO:0007517 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0005700 GO:GO:0035076 GO:GO:0042766 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0031491 GO:GO:0043044 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0016590 GO:GO:0008623 GO:GO:0008094
ChiTaRS:SMARCA1 GeneTree:ENSGT00680000100002 KO:K11654
SUPFAM:SSF101224 EMBL:L27127 EMBL:AY094908 EMBL:BT044562 PIR:A56533
RefSeq:NP_523719.1 RefSeq:NP_725203.1 RefSeq:NP_725204.1
UniGene:Dm.2581 PDB:1OFC PDBsum:1OFC ProteinModelPortal:Q24368
SMR:Q24368 DIP:DIP-24067N IntAct:Q24368 MINT:MINT-252539
STRING:Q24368 PaxDb:Q24368 PRIDE:Q24368 EnsemblMetazoa:FBtr0087841
EnsemblMetazoa:FBtr0087842 EnsemblMetazoa:FBtr0087843 GeneID:36390
KEGG:dme:Dmel_CG8625 CTD:36390 FlyBase:FBgn0011604
InParanoid:Q24368 OMA:EDYCHWR OrthoDB:EOG4M0CGK PhylomeDB:Q24368
EvolutionaryTrace:Q24368 GenomeRNAi:36390 NextBio:798287
Bgee:Q24368 GermOnline:CG8625 GO:GO:0031213 GO:GO:0070615
GO:GO:0035063 Uniprot:Q24368
Length = 1027
Score = 151 (58.2 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 33/100 (33%), Positives = 54/100 (54%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFR-VAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y R+DG E+R + +F ++ + + +LS A GI L A++V+ + WNP +
Sbjct: 474 YCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQM 533
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKL 99
QA DRAHRIGQ+ V + L+ + T ++ + KL
Sbjct: 534 DLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVKL 573
>TAIR|locus:2158357 [details] [associations]
symbol:AT5G43530 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0009941 "chloroplast envelope" evidence=IDA] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR014905
Pfam:PF00176 Pfam:PF00271 Pfam:PF08797 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00490
SMART:SM00910 Prosite:PS00518 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006281 GO:GO:0009941 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004386
InterPro:IPR017907 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AB016875 KO:K15505 OMA:PCAHRMC
HOGENOM:HOG000029930 ProtClustDB:CLSN2686824 IPI:IPI00529351
RefSeq:NP_199166.1 UniGene:At.55338 ProteinModelPortal:Q9FIY7
SMR:Q9FIY7 PaxDb:Q9FIY7 PRIDE:Q9FIY7 EnsemblPlants:AT5G43530.1
GeneID:834373 KEGG:ath:AT5G43530 GeneFarm:4653 TAIR:At5g43530
InParanoid:Q9FIY7 PhylomeDB:Q9FIY7 Genevestigator:Q9FIY7
GermOnline:AT5G43530 Uniprot:Q9FIY7
Length = 1277
Score = 152 (58.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 28/89 (31%), Positives = 52/89 (58%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
++R DG + + R+ V+ +F + + ++S+ A G+ LTAA+ V + +WNP +
Sbjct: 1154 FLRFDGKLAQKGREKVLKEFNETKQKTILLMSLKAGGVGLNLTAASSVFLMDPWWNPAVE 1213
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADD 89
QA R HRIGQ+ +V ++ + K T ++
Sbjct: 1214 EQAIMRIHRIGQKRTVFVRRFIVKDTVEE 1242
>WB|WBGene00004204 [details] [associations]
symbol:swsn-4 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0040010 GO:GO:0006355
GO:GO:0003677 GO:GO:0040035 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 OMA:QKKYTIS InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:Z68751 EMBL:Z68341 EMBL:AF230280 PIR:T20488
RefSeq:NP_502082.1 UniGene:Cel.23435 ProteinModelPortal:G5EF53
SMR:G5EF53 EnsemblMetazoa:F01G4.1 GeneID:178015
KEGG:cel:CELE_F01G4.1 CTD:178015 WormBase:F01G4.1 NextBio:899366
Uniprot:G5EF53
Length = 1474
Score = 152 (58.6 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 36/107 (33%), Positives = 57/107 (53%)
Query: 1 YIRIDGSVGSEERKSVVDQFQY--EDKFRVAVLSITAANSGITLTAANLVVFAELFWNPG 58
Y+R+DGS +ER ++ QF D F + +LS A G+ L A+ V+ + WNP
Sbjct: 893 YLRLDGSTKPDERGDLLTQFNAPNSDLF-LFMLSTRAGGLGLNLQTADTVIIFDSDWNPH 951
Query: 59 ILTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA+DRAHRIGQ+ V + L+ + ++ + KL+V +
Sbjct: 952 QDMQAQDRAHRIGQKKEVRVLRLITANSVEEKILAAARYKLNVDEKV 998
>POMBASE|SPAC1250.01 [details] [associations]
symbol:snf21 "ATP-dependent DNA helicase Snf21"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IC] [GO:0000991 "core RNA polymerase II binding
transcription factor activity" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IC] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0016586 "RSC complex"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 PomBase:SPAC1250.01 GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0006338 GO:GO:0000790
GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016586 GO:GO:0000991 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172362
KO:K11786 EMBL:AB162438 PIR:T37561 RefSeq:NP_594861.1
ProteinModelPortal:Q9UTN6 DIP:DIP-48388N STRING:Q9UTN6
EnsemblFungi:SPAC1250.01.1 GeneID:2542638 KEGG:spo:SPAC1250.01
OMA:WAPSISA OrthoDB:EOG4D565R NextBio:20803687 Uniprot:Q9UTN6
Length = 1199
Score = 151 (58.2 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 33/106 (31%), Positives = 57/106 (53%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYED-KFRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y+R+DGS +++R ++ F + + +LS A G+ L A+ V+ + WNP
Sbjct: 779 YLRLDGSTKADDRSKLLGVFNDPTAEVNLFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQ 838
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA+DRAHRIGQ V I L+ +++ ++ + KLD+ +
Sbjct: 839 DLQAQDRAHRIGQTKEVRIYRLITEKSVEENILARAQYKLDIDGKV 884
>MGI|MGI:106209 [details] [associations]
symbol:Hells "helicase, lymphoid specific" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IDA]
[GO:0001655 "urogenital system development" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005721 "centromeric heterochromatin"
evidence=IDA] [GO:0006306 "DNA methylation" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IMP] [GO:0010216 "maintenance of DNA
methylation" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0030098 "lymphocyte differentiation"
evidence=TAS] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 MGI:MGI:106209 GO:GO:0005524
GO:GO:0005634 GO:GO:0043066 GO:GO:0051301 GO:GO:0007067
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0001655
GO:GO:0004386 GO:GO:0005721 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031508
GO:GO:0010216 HOGENOM:HOG000172362 OMA:ETFYTAI GO:GO:0006346
GO:GO:0030098 GO:GO:0046651 CTD:3070 HOVERGEN:HBG060049
OrthoDB:EOG4SN1N4 EMBL:U25691 EMBL:AF155210 EMBL:AK013266
EMBL:AK147126 EMBL:BC020056 EMBL:BC100394 IPI:IPI00121431
IPI:IPI00808497 PIR:JC4666 RefSeq:NP_032260.2 UniGene:Mm.392920
UniGene:Mm.486446 UniGene:Mm.57223 ProteinModelPortal:Q60848
SMR:Q60848 DIP:DIP-43735N IntAct:Q60848 MINT:MINT-2521001
STRING:Q60848 PhosphoSite:Q60848 PaxDb:Q60848 PRIDE:Q60848
DNASU:15201 Ensembl:ENSMUST00000025965 GeneID:15201 KEGG:mmu:15201
UCSC:uc008hjt.1 GeneTree:ENSGT00550000075106 InParanoid:Q60848
NextBio:287739 Bgee:Q60848 CleanEx:MM_HELLS Genevestigator:Q60848
GermOnline:ENSMUSG00000025001 Uniprot:Q60848
Length = 821
Score = 149 (57.5 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 33/88 (37%), Positives = 48/88 (54%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
+ R+DGS+ ER+ + F + + ++S A GI LTAA+ V+ + WNP
Sbjct: 625 FSRLDGSMSYSEREKNIYSFNTDPDVFLFLVSTRAGGLGINLTAADTVIIYDSDWNPQSD 684
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTAD 88
QA+DR HRIGQ V++ LV T D
Sbjct: 685 LQAQDRCHRIGQTKPVVVYRLVTANTID 712
>RGD|1565734 [details] [associations]
symbol:Ercc6l "excision repair cross-complementing rodent repair
deficiency complementation group 6 - like" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR011990 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 RGD:1565734 GO:GO:0005524 GO:GO:0003677
Gene3D:1.25.40.10 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 CTD:54821 GeneTree:ENSGT00590000083118 OMA:TKNGDLE
OrthoDB:EOG4FR0RD EMBL:CH473966 IPI:IPI00362012
RefSeq:NP_001092144.1 UniGene:Rn.72855 Ensembl:ENSRNOT00000004310
GeneID:317252 KEGG:rno:317252 UCSC:RGD:1565734 NextBio:671491
Uniprot:D4A0G9
Length = 1230
Score = 151 (58.2 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 33/92 (35%), Positives = 55/92 (59%)
Query: 2 IRIDGSVGSE-ERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
+RIDG+V ER+ + FQ ++ V +L+ G+TLTAA+ VV + WNP
Sbjct: 506 LRIDGTVTHLWEREKRIQLFQQNKEYSVFLLTTQVGGVGLTLTAASRVVIFDPSWNPATD 565
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLW 92
QA DR +RIGQ+++V++ L+ T ++ ++
Sbjct: 566 AQAVDRVYRIGQKENVVVYRLITCGTVEEKIY 597
>UNIPROTKB|F1S594 [details] [associations]
symbol:LOC100622433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
GeneTree:ENSGT00550000074659 EMBL:FP102365
Ensembl:ENSSSCT00000014884 OMA:KSSGHER Uniprot:F1S594
Length = 866
Score = 149 (57.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 33/106 (31%), Positives = 58/106 (54%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYE-DKFRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y+R+DG+ +E+R ++ F ++ + +LS A G+ L +A+ V+ + WNP
Sbjct: 375 YLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQ 434
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA+DRAHRIGQQ+ V + L + ++ + KL+V +
Sbjct: 435 DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKV 480
>WB|WBGene00000274 [details] [associations]
symbol:btf-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 InterPro:IPR021133
PROSITE:PS50077 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K15192 InterPro:IPR022707
Pfam:PF12054 EMBL:Z80344 EMBL:Z82081 GeneTree:ENSGT00630000089754
EMBL:Z82079 RefSeq:NP_496802.2 ProteinModelPortal:G5EF07 SMR:G5EF07
EnsemblMetazoa:F15D4.1 GeneID:174965 KEGG:cel:CELE_F15D4.1
CTD:174965 WormBase:F15D4.1 OMA:ENDAMAS NextBio:886220
Uniprot:G5EF07
Length = 1649
Score = 152 (58.6 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 33/100 (33%), Positives = 57/100 (57%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
++ +DGSV + +R +V++F + V +L+ G+ LT A+ V+F + WNP
Sbjct: 1471 HLVLDGSVPAGDRMKMVNRFNEDKTIDVLILTTHVGGVGLNLTGADTVIFLDHDWNPMKD 1530
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLD 100
QA DRAHR+GQ +V + L+ + T ++ + L KL+
Sbjct: 1531 LQAIDRAHRLGQTRNVNVYRLITQGTVEEKVMSLAKFKLN 1570
>CGD|CAL0005444 [details] [associations]
symbol:SNF2 species:5476 "Candida albicans" [GO:0016514
"SWI/SNF complex" evidence=IPI] [GO:0009405 "pathogenesis"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IEA] [GO:0031492 "nucleosomal DNA
binding" evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:1900430 "positive regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:1900442 "positive regulation of filamentous growth of a
population of unicellular organisms in response to neutral pH"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:1900445 "positive regulation of filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0042766 "nucleosome mobilization" evidence=IEA]
[GO:0005987 "sucrose catabolic process" evidence=IEA] [GO:1900231
"regulation of single-species biofilm formation on inanimate
substrate" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0042148 "strand invasion"
evidence=IEA] [GO:0044109 "cellular alcohol catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0031496 "positive regulation of mating type
switching" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IEA] [GO:0061412 "positive regulation of
transcription from RNA polymerase II promoter in response to amino
acid starvation" evidence=IEA] [GO:0036244 "cellular response to
neutral pH" evidence=IMP] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0005444 GO:GO:0005524 GO:GO:0071216
GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 GO:GO:0009405
GO:GO:1900445 GO:GO:1900442 GO:GO:0006355 GO:GO:0003677
GO:GO:0016514 GO:GO:0004386 EMBL:AACQ01000007 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 KO:K11786
RefSeq:XP_722570.1 ProteinModelPortal:Q5AM49 MINT:MINT-2832160
STRING:Q5AM49 GeneID:3635855 KEGG:cal:CaO19.1526 Uniprot:Q5AM49
Length = 1690
Score = 152 (58.6 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 32/106 (30%), Positives = 57/106 (53%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDK-FRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y+R+DG +++R ++ F D + +LS A G+ L A+ V+ + WNP
Sbjct: 1145 YMRLDGGTKADDRTDLLKSFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQ 1204
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA+DRAHRIGQ++ V I L+ + + ++ + KL++ +
Sbjct: 1205 DLQAQDRAHRIGQKNEVRILRLITENSVEEMILERAHKKLEIDGKV 1250
>UNIPROTKB|Q5AM49 [details] [associations]
symbol:SNF2 "Putative uncharacterized protein SNF2"
species:237561 "Candida albicans SC5314" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016514 "SWI/SNF complex"
evidence=IPI] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0036244 "cellular
response to neutral pH" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
[GO:1900430 "positive regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:1900442
"positive regulation of filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:1900445 "positive regulation of filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0005444 GO:GO:0005524 GO:GO:0071216
GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 GO:GO:0009405
GO:GO:1900445 GO:GO:1900442 GO:GO:0006355 GO:GO:0003677
GO:GO:0016514 GO:GO:0004386 EMBL:AACQ01000007 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 KO:K11786
RefSeq:XP_722570.1 ProteinModelPortal:Q5AM49 MINT:MINT-2832160
STRING:Q5AM49 GeneID:3635855 KEGG:cal:CaO19.1526 Uniprot:Q5AM49
Length = 1690
Score = 152 (58.6 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 32/106 (30%), Positives = 57/106 (53%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDK-FRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y+R+DG +++R ++ F D + +LS A G+ L A+ V+ + WNP
Sbjct: 1145 YMRLDGGTKADDRTDLLKSFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQ 1204
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA+DRAHRIGQ++ V I L+ + + ++ + KL++ +
Sbjct: 1205 DLQAQDRAHRIGQKNEVRILRLITENSVEEMILERAHKKLEIDGKV 1250
>SGD|S000005831 [details] [associations]
symbol:ISW2 "ATP-dependent DNA translocase involved in
chromatin remodeling" species:4932 "Saccharomyces cerevisiae"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA;IPI] [GO:0006338 "chromatin remodeling"
evidence=IEA;IGI;IMP;IPI] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0060195 "negative
regulation of antisense RNA transcription" evidence=IGI]
[GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0008623
"CHRAC" evidence=ISS;IPI] [GO:0046020 "negative regulation of
transcription from RNA polymerase II promoter by pheromones"
evidence=IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IMP] [GO:0015616 "DNA
translocase activity" evidence=IDA] [GO:0003697 "single-stranded
DNA binding" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IGI]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 SGD:S000005831 GO:GO:0005524 EMBL:BK006948
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0003697
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006348
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0008623 GO:GO:0006369 GO:GO:0046020 GO:GO:0060195
GO:GO:0015616 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 OrthoDB:EOG48SM27 EMBL:Z75212 PIR:S67208
RefSeq:NP_014948.1 ProteinModelPortal:Q08773 SMR:Q08773
DIP:DIP-6603N IntAct:Q08773 MINT:MINT-469536 STRING:Q08773
PaxDb:Q08773 PeptideAtlas:Q08773 PRIDE:Q08773 EnsemblFungi:YOR304W
GeneID:854480 KEGG:sce:YOR304W CYGD:YOR304w OMA:NEQSALS
NextBio:976792 Genevestigator:Q08773 GermOnline:YOR304W
Uniprot:Q08773
Length = 1120
Score = 150 (57.9 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 35/91 (38%), Positives = 49/91 (53%)
Query: 1 YIRIDGSVGSEERKSVVDQFQY--EDKFRVAVLSITAANSGITLTAANLVVFAELFWNPG 58
Y RIDGS EER +D++ +KF V +L+ A GI L A+ V+ + WNP
Sbjct: 533 YCRIDGSTSHEERIEAIDEYNKPNSEKF-VFLLTTRAGGLGINLVTADTVILFDSDWNPQ 591
Query: 59 ILTQAEDRAHRIGQQDSVLIQYLVAKQTADD 89
QA DRAHRIGQ+ V + V + ++
Sbjct: 592 ADLQAMDRAHRIGQKKQVHVYRFVTENAIEE 622
>UNIPROTKB|K7GT64 [details] [associations]
symbol:LOC100622433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00550000074659 EMBL:FP102365
Ensembl:ENSSSCT00000034320 Uniprot:K7GT64
Length = 980
Score = 149 (57.5 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 33/106 (31%), Positives = 58/106 (54%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYE-DKFRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y+R+DG+ +E+R ++ F ++ + +LS A G+ L +A+ V+ + WNP
Sbjct: 456 YLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQ 515
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA+DRAHRIGQQ+ V + L + ++ + KL+V +
Sbjct: 516 DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKV 561
>UNIPROTKB|O53499 [details] [associations]
symbol:helZ "PROBABLE HELICASE HELZ" species:83332
"Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005618 GenomeReviews:AL123456_GR GO:GO:0003677 EMBL:BX842578
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
PIR:B70841 RefSeq:NP_216617.1 ProteinModelPortal:O53499 SMR:O53499
EnsemblBacteria:EBMYCT00000002428 GeneID:888635 KEGG:mtu:Rv2101
PATRIC:18153236 TubercuList:Rv2101 HOGENOM:HOG000099451 OMA:PYQERGL
ProtClustDB:CLSK872005 InterPro:IPR022138 Pfam:PF12419
Uniprot:O53499
Length = 1013
Score = 149 (57.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 32/95 (33%), Positives = 54/95 (56%)
Query: 4 IDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGILTQA 63
+ G + R +V +FQ D + +LS+ A +G+ LTAAN VV + +WNP + QA
Sbjct: 883 LHGGTPRKRRDEMVARFQSGDGPPIFLLSLKAGGTGLNLTAANHVVHLDRWWNPAVENQA 942
Query: 64 EDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTK 98
DRA RIGQ+ +V ++ + T ++ + ++ K
Sbjct: 943 TDRAFRIGQRRTVQVRKFICTGTLEEKIDEMIEEK 977
>MGI|MGI:2654144 [details] [associations]
symbol:Ercc6l "excision repair cross-complementing rodent
repair deficiency complementation group 6 like" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005694 "chromosome" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR011990 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50005
PROSITE:PS50293 PROSITE:PS51194 SMART:SM00490 MGI:MGI:2654144
GO:GO:0005524 GO:GO:0051301 GO:GO:0007067 GO:GO:0003677
Gene3D:1.25.40.10 GO:GO:0004386 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0000777
CTD:54821 GeneTree:ENSGT00590000083118 HOGENOM:HOG000074172
HOVERGEN:HBG107854 OrthoDB:EOG4FR0RD EMBL:AY172688 EMBL:AK029015
EMBL:AK045113 EMBL:AK084617 EMBL:AK084618 EMBL:AL807784
EMBL:BC037660 IPI:IPI00221889 RefSeq:NP_666347.2 UniGene:Mm.31911
ProteinModelPortal:Q8BHK9 SMR:Q8BHK9 IntAct:Q8BHK9 STRING:Q8BHK9
PhosphoSite:Q8BHK9 PaxDb:Q8BHK9 PRIDE:Q8BHK9
Ensembl:ENSMUST00000056904 GeneID:236930 KEGG:mmu:236930
UCSC:uc009tyk.2 InParanoid:Q8BHK9 NextBio:383173 Bgee:Q8BHK9
Genevestigator:Q8BHK9 Uniprot:Q8BHK9
Length = 1240
Score = 150 (57.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 33/92 (35%), Positives = 54/92 (58%)
Query: 2 IRIDGSVGSE-ERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
+RIDG+V ER+ + FQ ++ V +L+ G+TLTAA VV + WNP
Sbjct: 507 LRIDGTVTHLWEREKRIQLFQQNKEYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATD 566
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLW 92
QA DR +RIGQ+++V++ L+ T ++ ++
Sbjct: 567 AQAVDRVYRIGQKENVVVYRLITCGTVEEKIY 598
>UNIPROTKB|E2QVR5 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224
Ensembl:ENSCAFT00000029649 Uniprot:E2QVR5
Length = 1073
Score = 149 (57.5 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 36/106 (33%), Positives = 56/106 (52%)
Query: 1 YIRIDGSVGSEER--KSVVDQFQYEDKFR-VAVLSITAANSGITLTAANLVVFAELFWNP 57
Y R+DG EER K ++ F + + + +LS A GI L +A++V+ + WNP
Sbjct: 542 YCRLDGQTPHEEREKKEAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNP 601
Query: 58 GILTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPS 103
+ QA DRAHRIGQ+ V + L+ T ++ + KL + S
Sbjct: 602 QVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDS 647
>DICTYBASE|DDB_G0281441 [details] [associations]
symbol:ercc6 "DNA excision repair protein 6"
species:44689 "Dictyostelium discoideum" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0006289 "nucleotide-excision repair"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0281441 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000152_GR GO:GO:0003677
EMBL:AAFI02000041 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006289 GO:GO:0008094 KO:K10841
RefSeq:XP_640679.1 ProteinModelPortal:Q54TY2 STRING:Q54TY2
EnsemblProtists:DDB0232361 GeneID:8623063 KEGG:ddi:DDB_G0281441
InParanoid:Q54TY2 OMA:NIHKERW ProtClustDB:CLSZ2736745
Uniprot:Q54TY2
Length = 1655
Score = 151 (58.2 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 29/92 (31%), Positives = 52/92 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DG+ +R+ +V+QF + + +L+ G+ LT AN V+ + WNP
Sbjct: 1157 YLRMDGTTSIRQRQCLVEQFNIDPSLFIFLLTTKVGGLGLNLTGANRVILFDPDWNPSTD 1216
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLW 92
QA +R +RIGQ+ +V I L+ T ++ ++
Sbjct: 1217 MQARERVYRIGQKKAVTIYRLITLGTIEEKIY 1248
>DICTYBASE|DDB_G0271052 [details] [associations]
symbol:snf2b "SNF2-related protein Snf2a"
species:44689 "Dictyostelium discoideum" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00951 dictyBase:DDB_G0271052 GO:GO:0005524 GO:GO:0005654
EMBL:AAFI02000005 GO:GO:0003677 GO:GO:0006357 GO:GO:0004386
InterPro:IPR011050 SUPFAM:SSF51126 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF47370
KO:K11647 InterPro:IPR014012 PROSITE:PS51204 RefSeq:XP_646649.1
ProteinModelPortal:Q55C32 EnsemblProtists:DDB0220695 GeneID:8617621
KEGG:ddi:DDB_G0271052 InParanoid:Q55C32 OMA:NINDNPN Uniprot:Q55C32
Length = 3247
Score = 154 (59.3 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 32/90 (35%), Positives = 55/90 (61%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYED-KFRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
++R+DGS S+ER +++ F + ++ + VLS A G+ L A+ V+ + WNP +
Sbjct: 2069 FLRLDGSTKSDERGHLLELFNAPNSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPQM 2128
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADD 89
QA+DRAHRIGQ+ +V + LV + ++
Sbjct: 2129 DLQAQDRAHRIGQKQTVRVLRLVTAHSVEE 2158
>UNIPROTKB|B5MDQ0 [details] [associations]
symbol:ERCC6L "FLJ20105 protein, isoform CRA_a"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AL135749 EMBL:CH471213
HOGENOM:HOG000074172 HOVERGEN:HBG107854 OrthoDB:EOG4FR0RD
UniGene:Hs.47558 HGNC:HGNC:20794 IPI:IPI00873388 SMR:B5MDQ0
IntAct:B5MDQ0 STRING:B5MDQ0 Ensembl:ENST00000373657 Uniprot:B5MDQ0
Length = 1127
Score = 149 (57.5 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 33/92 (35%), Positives = 54/92 (58%)
Query: 2 IRIDGSVGSE-ERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
+RIDG+V ER+ ++ FQ + V +L+ G+TLTAA VV + WNP
Sbjct: 381 LRIDGTVTHLLEREKRINLFQQNKDYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATD 440
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLW 92
QA DR +RIGQ+++V++ L+ T ++ ++
Sbjct: 441 AQAVDRVYRIGQKENVVVYRLITCGTVEEKIY 472
>UNIPROTKB|E2RGF7 [details] [associations]
symbol:TTF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR010666 Pfam:PF00176 Pfam:PF00271
Pfam:PF06839 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0008270 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00700000104545 OMA:WCGSIPW EMBL:AAEX03011013
Ensembl:ENSCAFT00000015640 Uniprot:E2RGF7
Length = 1150
Score = 149 (57.5 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 28/89 (31%), Positives = 51/89 (57%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y I+GSV ++R +V+ F +V ++S++A G+ LT N + ++ WNP +
Sbjct: 1024 YATINGSVRPKQRMDLVEAFNSSRSPQVMLISLSAGGVGLNLTGGNHLFLLDMHWNPSLE 1083
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADD 89
QA DR +R+GQQ V++ + + T ++
Sbjct: 1084 DQACDRIYRVGQQKDVVVHKFICEGTVEE 1112
>UNIPROTKB|F1N8K9 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0004386 GeneTree:ENSGT00560000076896
EMBL:AADN02065411 EMBL:AADN02065412 EMBL:AADN02065413
IPI:IPI00592819 Ensembl:ENSGALT00000023600 ArrayExpress:F1N8K9
Uniprot:F1N8K9
Length = 559
Score = 145 (56.1 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 36/88 (40%), Positives = 48/88 (54%)
Query: 3 RIDGSVGSEERKSVVDQFQYEDKFRVA-VLSITAANSGITLTAANLVVFAELFWNPGILT 61
R+DGS+ E RK +D F E +LS A GI L +A+ VV + WNP
Sbjct: 81 RLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDL 140
Query: 62 QAEDRAHRIGQQDSVLIQYLVAKQTADD 89
QA+ RAHRIGQ+ V I LV K + ++
Sbjct: 141 QAQARAHRIGQKKQVNIYRLVTKGSVEE 168
>UNIPROTKB|I3LFY4 [details] [associations]
symbol:ERCC6L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001440
InterPro:IPR001650 InterPro:IPR011990 Pfam:PF00176 Pfam:PF00271
Pfam:PF00515 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 Gene3D:1.25.40.10 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00590000083118
OMA:TKNGDLE EMBL:CU469343 Ensembl:ENSSSCT00000023457 Uniprot:I3LFY4
Length = 1225
Score = 149 (57.5 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 32/92 (34%), Positives = 54/92 (58%)
Query: 2 IRIDGSVGS-EERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
+RIDG++ ER+ + FQ + V +L+ G+TLTAA+ VV + WNP
Sbjct: 484 LRIDGTITHLVEREKRISLFQQNKDYSVFLLTTQVGGVGLTLTAASRVVIFDPSWNPATD 543
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLW 92
QA DR +RIGQ+++V++ L+ T ++ ++
Sbjct: 544 AQAVDRVYRIGQKENVVVYRLITCGTVEEKIY 575
>UNIPROTKB|A6QQR4 [details] [associations]
symbol:ERCC6L "DNA excision repair protein ERCC-6-like"
species:9913 "Bos taurus" [GO:0000777 "condensed chromosome
kinetochore" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR011990
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50005 PROSITE:PS50293
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0051301
GO:GO:0007067 GO:GO:0003677 Gene3D:1.25.40.10 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000777 EMBL:BC149963 EMBL:BT026201 IPI:IPI00694211
RefSeq:NP_001096000.1 UniGene:Bt.74729 ProteinModelPortal:A6QQR4
STRING:A6QQR4 PRIDE:A6QQR4 Ensembl:ENSBTAT00000007362 GeneID:782916
KEGG:bta:782916 CTD:54821 GeneTree:ENSGT00590000083118
HOGENOM:HOG000074172 HOVERGEN:HBG107854 InParanoid:A6QQR4
OMA:TKNGDLE OrthoDB:EOG4FR0RD NextBio:20925771 ArrayExpress:A6QQR4
Uniprot:A6QQR4
Length = 1242
Score = 149 (57.5 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 32/92 (34%), Positives = 54/92 (58%)
Query: 2 IRIDGSVGS-EERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
+RIDG++ ER+ + FQ + V +L+ G+TLTAA+ VV + WNP
Sbjct: 506 LRIDGTITHLVEREKRISLFQQNKDYSVFLLTTQVGGVGLTLTAASRVVIFDPSWNPATD 565
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLW 92
QA DR +RIGQ+++V++ L+ T ++ ++
Sbjct: 566 AQAVDRVYRIGQKENVVVYRLITCGTVEEKIY 597
>UNIPROTKB|Q2NKX8 [details] [associations]
symbol:ERCC6L "DNA excision repair protein ERCC-6-like"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
[GO:0000777 "condensed chromosome kinetochore" evidence=IEA]
[GO:0000087 "M phase of mitotic cell cycle" evidence=TAS]
[GO:0000236 "mitotic prometaphase" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR011990
InterPro:IPR013026 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50005
PROSITE:PS50293 PROSITE:PS51194 SMART:SM00490 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_115566 Reactome:REACT_21300
GO:GO:0051301 GO:GO:0003677 Gene3D:1.25.40.10 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000236 GO:GO:0000777 CTD:54821 HOGENOM:HOG000074172
HOVERGEN:HBG107854 OMA:TKNGDLE EMBL:EU069463 EMBL:BC008808
EMBL:BC111486 EMBL:AK000112 EMBL:AK074719 EMBL:AY121802
IPI:IPI00552569 RefSeq:NP_060139.2 UniGene:Hs.47558
ProteinModelPortal:Q2NKX8 SMR:Q2NKX8 IntAct:Q2NKX8 STRING:Q2NKX8
PhosphoSite:Q2NKX8 DMDM:121948339 PaxDb:Q2NKX8 PeptideAtlas:Q2NKX8
PRIDE:Q2NKX8 DNASU:54821 Ensembl:ENST00000334463 GeneID:54821
KEGG:hsa:54821 UCSC:uc004eap.1 GeneCards:GC0XM071424
H-InvDB:HIX0016867 HGNC:HGNC:20794 HPA:HPA050492 MIM:300687
neXtProt:NX_Q2NKX8 PharmGKB:PA162385290 InParanoid:Q2NKX8
GenomeRNAi:54821 NextBio:57573 ArrayExpress:Q2NKX8 Bgee:Q2NKX8
CleanEx:HS_ERCC6L Genevestigator:Q2NKX8 Uniprot:Q2NKX8
Length = 1250
Score = 149 (57.5 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 33/92 (35%), Positives = 54/92 (58%)
Query: 2 IRIDGSVGSE-ERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
+RIDG+V ER+ ++ FQ + V +L+ G+TLTAA VV + WNP
Sbjct: 504 LRIDGTVTHLLEREKRINLFQQNKDYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATD 563
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLW 92
QA DR +RIGQ+++V++ L+ T ++ ++
Sbjct: 564 AQAVDRVYRIGQKENVVVYRLITCGTVEEKIY 595
>UNIPROTKB|D4AA07 [details] [associations]
symbol:Smarca4 "Transcription activator BRG1" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS51194 SMART:SM00490 SMART:SM00592 RGD:621728
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OrthoDB:EOG418BMJ IPI:IPI00915110 Ensembl:ENSRNOT00000060926
ArrayExpress:D4AA07 Uniprot:D4AA07
Length = 1262
Score = 149 (57.5 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 33/106 (31%), Positives = 58/106 (54%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYE-DKFRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y+R+DG+ +E+R ++ F ++ + +LS A G+ L +A+ V+ + WNP
Sbjct: 922 YLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQ 981
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA+DRAHRIGQQ+ V + L + ++ + KL+V +
Sbjct: 982 DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKV 1027
>UNIPROTKB|E1BS47 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0003682 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AADN02022009 EMBL:AADN02022010
IPI:IPI00598234 Ensembl:ENSGALT00000005903 ArrayExpress:E1BS47
Uniprot:E1BS47
Length = 1326
Score = 149 (57.5 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 37/106 (34%), Positives = 53/106 (50%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANS-GITLTAANLVVFAELFWNPGI 59
Y RIDG V R++ +D+F D R L T A GI LTAA+ + + WNP
Sbjct: 519 YERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQN 578
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA+ R HRIGQ SV I L+ + + + ++ KL + +
Sbjct: 579 DLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAV 624
>TAIR|locus:2087223 [details] [associations]
symbol:CHR40 "chromatin remodeling 40" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0007267 "cell-cell signaling" evidence=RCA] [GO:0009616 "virus
induced gene silencing" evidence=RCA] [GO:0009909 "regulation of
flower development" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0034968
"histone lysine methylation" evidence=RCA] [GO:0035196 "production
of miRNAs involved in gene silencing by miRNA" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0004386 EMBL:AP000382
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K10875 IPI:IPI00526793 RefSeq:NP_189077.1 UniGene:At.37544
ProteinModelPortal:Q9LK10 SMR:Q9LK10 PaxDb:Q9LK10 PRIDE:Q9LK10
EnsemblPlants:AT3G24340.1 GeneID:822023 KEGG:ath:AT3G24340
TAIR:At3g24340 HOGENOM:HOG000153033 InParanoid:Q9LK10 OMA:TEVRTEK
PhylomeDB:Q9LK10 ProtClustDB:CLSN2914813 Genevestigator:Q9LK10
Uniprot:Q9LK10
Length = 1132
Score = 148 (57.2 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 31/84 (36%), Positives = 50/84 (59%)
Query: 6 GSVGSEERKSVVDQFQYEDK-FRVAVLSITAANSGITLTAANLVVFAELFWNPGILTQAE 64
G V +R+ ++D F D +V + S A + GI+L A+ VV ++ WNP + +QA
Sbjct: 980 GKVEQRDRQHMIDNFNKPDSGSKVLLASTKACSEGISLVGASRVVILDVVWNPSVESQAI 1039
Query: 65 DRAHRIGQQDSVLIQYLVAKQTAD 88
RA RIGQ+ +V I +L+ K T++
Sbjct: 1040 SRAFRIGQKRAVFIYHLMVKDTSE 1063
>FB|FBgn0037531 [details] [associations]
symbol:CG10445 species:7227 "Drosophila melanogaster"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IMP] [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000381
GeneTree:ENSGT00700000104545 FlyBase:FBgn0037531 GenomeRNAi:40938
NextBio:821377 RefSeq:NP_001246974.1 RefSeq:NP_649751.2
UniGene:Dm.24034 ProteinModelPortal:Q9VHY2 IntAct:Q9VHY2
EnsemblMetazoa:FBtr0300685 EnsemblMetazoa:FBtr0304704 GeneID:40938
KEGG:dme:Dmel_CG10445 UCSC:CG10445-RA InParanoid:Q9VHY2 OMA:NLNVANH
OrthoDB:EOG40ZPCJ Bgee:Q9VHY2 Uniprot:Q9VHY2
Length = 945
Score = 147 (56.8 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 31/97 (31%), Positives = 54/97 (55%)
Query: 5 DGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGILTQAE 64
+G + ++ER+ V+ F ++ RV +LS+TA G+ L AN ++ +L WNP + QA+
Sbjct: 818 NGQLTAKEREIVLRDFNANNEKRVLLLSLTAGGVGLNLNVANHMLIVDLHWNPQLERQAQ 877
Query: 65 DRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
DR +R GQ I + + T + + L KL++
Sbjct: 878 DRIYRYGQTKPTFIYRYMCQDTVEQRIKSLQDCKLEI 914
>MGI|MGI:1196437 [details] [associations]
symbol:Hltf "helicase-like transcription factor"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR014905 Pfam:PF00176 Pfam:PF00271
Pfam:PF08797 PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184
SMART:SM00490 SMART:SM00910 UniPathway:UPA00143 MGI:MGI:1196437
Prosite:PS00518 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0016874 GO:GO:0008270 GO:GO:0006357
GO:GO:0006351 GO:GO:0016568 GO:GO:0016887 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004386
InterPro:IPR017907 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 CTD:6596 HOVERGEN:HBG079192 KO:K15711 OMA:SNWIDQF
EMBL:AF010138 EMBL:AF010600 EMBL:BC039796 EMBL:BC057116
EMBL:BC059240 IPI:IPI00315178 RefSeq:NP_033236.2 RefSeq:NP_659208.2
UniGene:Mm.209650 ProteinModelPortal:Q6PCN7 SMR:Q6PCN7
STRING:Q6PCN7 PhosphoSite:Q6PCN7 PRIDE:Q6PCN7
Ensembl:ENSMUST00000002502 GeneID:20585 KEGG:mmu:20585
UCSC:uc008osk.1 GeneTree:ENSGT00700000104586 HOGENOM:HOG000172619
InParanoid:Q6PCN7 OrthoDB:EOG47SSD6 NextBio:298877 Bgee:Q6PCN7
CleanEx:MM_HLTF Genevestigator:Q6PCN7 GermOnline:ENSMUSG00000002428
Uniprot:Q6PCN7
Length = 1003
Score = 147 (56.8 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 31/103 (30%), Positives = 55/103 (53%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFR--VAVLSITAANSGITLTAANLVVFAELFWNPG 58
+ R+DGS+ ++R + +FQ + + +LS+ A G+ L AA+ V + WNP
Sbjct: 872 FTRLDGSMAQKKRVESIQRFQNTEAGSPTIMLLSLKAGGVGLNLCAASRVFLMDPAWNPA 931
Query: 59 ILTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
Q DR HR+GQ+ V+I + K + ++ + + TK D+
Sbjct: 932 AEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLKIQNTKRDL 974
>UNIPROTKB|A7Z019 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9913
"Bos taurus" [GO:0071565 "nBAF complex" evidence=ISS] [GO:0071564
"npBAF complex" evidence=ISS] [GO:0060347 "heart trabecula
formation" evidence=IEA] [GO:0060318 "definitive erythrocyte
differentiation" evidence=IEA] [GO:0048730 "epidermis
morphogenesis" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0006351 GO:GO:0003682 GO:GO:0006338
GO:GO:0000122 GO:GO:0071564 GO:GO:0071565 GO:GO:0000902
GO:GO:0004386 GO:GO:0001570 GO:GO:0035116 GO:GO:0005719
GO:GO:0030902 GO:GO:0048730 GO:GO:0000977 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0019827
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347 GO:GO:0043966
GO:GO:0043388 KO:K11647 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726
HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
OrthoDB:EOG418BMJ EMBL:BC153216 IPI:IPI00693529
RefSeq:NP_001099084.1 UniGene:Bt.27590 ProteinModelPortal:A7Z019
SMR:A7Z019 STRING:A7Z019 PRIDE:A7Z019 GeneID:414274 KEGG:bta:414274
CTD:6597 InParanoid:A7Z019 NextBio:20818684 ArrayExpress:A7Z019
Uniprot:A7Z019
Length = 1606
Score = 149 (57.5 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 33/106 (31%), Positives = 58/106 (54%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYE-DKFRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y+R+DG+ +E+R ++ F ++ + +LS A G+ L +A+ V+ + WNP
Sbjct: 1115 YLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQ 1174
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA+DRAHRIGQQ+ V + L + ++ + KL+V +
Sbjct: 1175 DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKV 1220
>MGI|MGI:88192 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=ISO] [GO:0000792 "heterochromatin"
evidence=IDA] [GO:0000902 "cell morphogenesis" evidence=IMP]
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=IDA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=ISO] [GO:0001570
"vasculogenesis" evidence=IMP] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0001832 "blastocyst growth"
evidence=IMP] [GO:0001835 "blastocyst hatching" evidence=IMP]
[GO:0001889 "liver development" evidence=IMP] [GO:0002039 "p53
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003713 "transcription
coactivator activity" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin" evidence=IDA]
[GO:0005726 "perichromatin fibrils" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0006337 "nucleosome disassembly" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=ISO;IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0007403 "glial cell fate determination"
evidence=IMP] [GO:0007507 "heart development" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IMP] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA;TAS]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IMP;TAS] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IDA] [GO:0030198 "extracellular
matrix organization" evidence=IMP] [GO:0030216 "keratinocyte
differentiation" evidence=IMP] [GO:0030308 "negative regulation of
cell growth" evidence=ISO] [GO:0030900 "forebrain development"
evidence=IMP] [GO:0030902 "hindbrain development" evidence=IMP]
[GO:0030957 "Tat protein binding" evidence=ISO] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IMP] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IMP] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO] [GO:0043388
"positive regulation of DNA binding" evidence=IGI] [GO:0043923
"positive regulation by host of viral transcription" evidence=ISO]
[GO:0043966 "histone H3 acetylation" evidence=IMP] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0048562 "embryonic
organ morphogenesis" evidence=IMP] [GO:0048730 "epidermis
morphogenesis" evidence=IMP] [GO:0050681 "androgen receptor
binding" evidence=ISO] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0060318 "definitive erythrocyte differentiation"
evidence=IMP] [GO:0060347 "heart trabecula formation" evidence=IGI]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=ISO] [GO:0070577 "histone acetyl-lysine binding"
evidence=ISO] [GO:0071564 "npBAF complex" evidence=ISO;IDA]
[GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778 "WINAC
complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 MGI:MGI:88192
GO:GO:0005524 GO:GO:0003714 GO:GO:0030216 GO:GO:0045944
GO:GO:0030198 GO:GO:0030900 GO:GO:0001889 EMBL:CH466522
GO:GO:0006351 GO:GO:0003682 GO:GO:0016887 GO:GO:0006338
GO:GO:0000122 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0000902 GO:GO:0004386 GO:GO:0001570 GO:GO:0035116
GO:GO:0005719 GO:GO:0030902 GO:GO:0048730 GO:GO:0000977
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0019827 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 KO:K11647 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0001835
GO:GO:0007403 GO:GO:0006346 GO:GO:0010424 GO:GO:0060318
GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 HOGENOM:HOG000172363
HOVERGEN:HBG056636 GO:GO:0035887 OrthoDB:EOG418BMJ CTD:6597
EMBL:AK147285 EMBL:AK160825 EMBL:AK166837 EMBL:BC079560
IPI:IPI00875789 IPI:IPI00955124 RefSeq:NP_001167549.1
RefSeq:NP_001167550.1 RefSeq:NP_035547.2 UniGene:Mm.286593
ProteinModelPortal:Q3TKT4 SMR:Q3TKT4 DIP:DIP-40650N DIP:DIP-59249N
IntAct:Q3TKT4 MINT:MINT-1958721 STRING:Q3TKT4 PhosphoSite:Q3TKT4
PaxDb:Q3TKT4 PRIDE:Q3TKT4 Ensembl:ENSMUST00000034707
Ensembl:ENSMUST00000098948 Ensembl:ENSMUST00000174008 GeneID:20586
KEGG:mmu:20586 UCSC:uc009omd.2 UCSC:uc009ome.2 InParanoid:Q3TUD7
NextBio:298883 Bgee:Q3TKT4 Genevestigator:Q3TKT4 Uniprot:Q3TKT4
Length = 1613
Score = 149 (57.5 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 33/106 (31%), Positives = 58/106 (54%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYE-DKFRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y+R+DG+ +E+R ++ F ++ + +LS A G+ L +A+ V+ + WNP
Sbjct: 1123 YLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQ 1182
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA+DRAHRIGQQ+ V + L + ++ + KL+V +
Sbjct: 1183 DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKV 1228
>RGD|621728 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0000792
"heterochromatin" evidence=ISO] [GO:0000902 "cell morphogenesis"
evidence=ISO] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=ISO] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=ISO]
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0001701 "in utero
embryonic development" evidence=ISO] [GO:0001832 "blastocyst
growth" evidence=ISO] [GO:0001835 "blastocyst hatching"
evidence=ISO] [GO:0001889 "liver development" evidence=ISO]
[GO:0002039 "p53 binding" evidence=ISO] [GO:0003407 "neural retina
development" evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003713
"transcription coactivator activity" evidence=ISO] [GO:0003714
"transcription corepressor activity" evidence=ISO;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin"
evidence=ISO] [GO:0005726 "perichromatin fibrils" evidence=ISO]
[GO:0006337 "nucleosome disassembly" evidence=ISO;IDA] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA;ISO] [GO:0007403 "glial cell fate determination"
evidence=ISO] [GO:0007507 "heart development" evidence=ISO]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=ISO] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0019827 "stem cell
maintenance" evidence=ISO] [GO:0022008 "neurogenesis" evidence=ISO]
[GO:0030198 "extracellular matrix organization" evidence=ISO]
[GO:0030216 "keratinocyte differentiation" evidence=ISO]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0030900 "forebrain development" evidence=ISO] [GO:0030902
"hindbrain development" evidence=ISO] [GO:0030957 "Tat protein
binding" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=IDA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=ISO] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=ISO] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IDA] [GO:0043388 "positive regulation of DNA
binding" evidence=ISO] [GO:0043923 "positive regulation by host of
viral transcription" evidence=ISO] [GO:0043966 "histone H3
acetylation" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0047485 "protein
N-terminus binding" evidence=ISO] [GO:0048562 "embryonic organ
morphogenesis" evidence=ISO] [GO:0048730 "epidermis morphogenesis"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0060318
"definitive erythrocyte differentiation" evidence=ISO] [GO:0060347
"heart trabecula formation" evidence=ISO] [GO:0060766 "negative
regulation of androgen receptor signaling pathway" evidence=ISO]
[GO:0070577 "histone acetyl-lysine binding" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=ISO;ISS] [GO:0071565 "nBAF
complex" evidence=ISO;ISS] [GO:0071778 "WINAC complex"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524 GO:GO:0003714
GO:GO:0007399 GO:GO:0006355 GO:GO:0032403 GO:GO:0003677
GO:GO:0006351 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0004386 GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172363
HOVERGEN:HBG056636 EMBL:AJ504723 IPI:IPI00781891 UniGene:Rn.23417
ProteinModelPortal:Q8K1P7 SMR:Q8K1P7 IntAct:Q8K1P7 STRING:Q8K1P7
PhosphoSite:Q8K1P7 PRIDE:Q8K1P7 UCSC:RGD:621728 ArrayExpress:Q8K1P7
Genevestigator:Q8K1P7 Uniprot:Q8K1P7
Length = 1613
Score = 149 (57.5 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 33/106 (31%), Positives = 58/106 (54%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYE-DKFRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y+R+DG+ +E+R ++ F ++ + +LS A G+ L +A+ V+ + WNP
Sbjct: 1123 YLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQ 1182
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA+DRAHRIGQQ+ V + L + ++ + KL+V +
Sbjct: 1183 DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKV 1228
>UNIPROTKB|E2RJ89 [details] [associations]
symbol:SMARCA4 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6597 EMBL:AAEX03012414 RefSeq:XP_867683.1
Ensembl:ENSCAFT00000027907 GeneID:476710 KEGG:cfa:476710
OMA:HKPMESM Uniprot:E2RJ89
Length = 1614
Score = 149 (57.5 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 33/106 (31%), Positives = 58/106 (54%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYE-DKFRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y+R+DG+ +E+R ++ F ++ + +LS A G+ L +A+ V+ + WNP
Sbjct: 1123 YLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQ 1182
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA+DRAHRIGQQ+ V + L + ++ + KL+V +
Sbjct: 1183 DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKV 1228
>UNIPROTKB|G3V790 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4, isoform
CRA_b" species:10116 "Rattus norvegicus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000977 "RNA
polymerase II regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001835
"blastocyst hatching" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IEA]
[GO:0007403 "glial cell fate determination" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0030216 "keratinocyte differentiation" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0030902
"hindbrain development" evidence=IEA] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IEA] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IEA] [GO:0043388 "positive
regulation of DNA binding" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048562 "embryonic organ morphogenesis" evidence=IEA]
[GO:0048730 "epidermis morphogenesis" evidence=IEA] [GO:0060318
"definitive erythrocyte differentiation" evidence=IEA] [GO:0060347
"heart trabecula formation" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:CH473993
UniGene:Rn.23417 Ensembl:ENSRNOT00000013165 Uniprot:G3V790
Length = 1614
Score = 149 (57.5 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 33/106 (31%), Positives = 58/106 (54%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYE-DKFRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y+R+DG+ +E+R ++ F ++ + +LS A G+ L +A+ V+ + WNP
Sbjct: 1123 YLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQ 1182
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA+DRAHRIGQQ+ V + L + ++ + KL+V +
Sbjct: 1183 DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKV 1228
>UNIPROTKB|F1M6Y4 [details] [associations]
symbol:Smarca4 "Transcription activator BRG1" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst
growth" evidence=IEA] [GO:0001835 "blastocyst hatching"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0005726
"perichromatin fibrils" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=IEA] [GO:0007403 "glial cell fate
determination" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0010424 "DNA methylation on cytosine
within a CG sequence" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IEA] [GO:0030902 "hindbrain development" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0048730 "epidermis morphogenesis"
evidence=IEA] [GO:0060318 "definitive erythrocyte differentiation"
evidence=IEA] [GO:0060347 "heart trabecula formation" evidence=IEA]
[GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726
GO:GO:0035887 IPI:IPI00951882 Ensembl:ENSRNOT00000060927
ArrayExpress:F1M6Y4 Uniprot:F1M6Y4
Length = 1618
Score = 149 (57.5 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 33/106 (31%), Positives = 58/106 (54%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYE-DKFRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y+R+DG+ +E+R ++ F ++ + +LS A G+ L +A+ V+ + WNP
Sbjct: 1123 YLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQ 1182
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA+DRAHRIGQQ+ V + L + ++ + KL+V +
Sbjct: 1183 DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKV 1228
>UNIPROTKB|Q71Z25 [details] [associations]
symbol:LMOf2365_1665 "Helicase, Snf2 family" species:265669
"Listeria monocytogenes serotype 4b str. F2365" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR007527 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50966 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0004386 EMBL:AE017262
GenomeReviews:AE017262_GR eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 RefSeq:YP_014262.1
ProteinModelPortal:Q71Z25 STRING:Q71Z25 GeneID:2798638
KEGG:lmf:LMOf2365_1665 PATRIC:20324567 HOGENOM:HOG000026038
OMA:NTLNAEM ProtClustDB:CLSK629151 InterPro:IPR013663 Pfam:PF08455
Uniprot:Q71Z25
Length = 1072
Score = 147 (56.8 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 31/95 (32%), Positives = 55/95 (57%)
Query: 4 IDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGILTQA 63
+DG S+ R +V+ F E + + ++S+ A +G+ L A+ V+ +L+WNP + QA
Sbjct: 943 MDGKTPSKTRLDMVNAFN-EGENDIFLISLKAGGTGLNLVGADTVILYDLWWNPAVEEQA 1001
Query: 64 EDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTK 98
RAHRIGQ+ V + ++ K T ++ ++ L K
Sbjct: 1002 TGRAHRIGQKRVVQVFRMITKGTIEERIFDLQKKK 1036
>ZFIN|ZDB-GENE-030605-1 [details] [associations]
symbol:smarca4 "SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily a, member 4"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0031101 "fin regeneration" evidence=IMP] [GO:0003407 "neural
retina development" evidence=IMP] [GO:0007417 "central nervous
system development" evidence=IMP] [GO:0014032 "neural crest cell
development" evidence=IMP] [GO:0060059 "embryonic retina
morphogenesis in camera-type eye" evidence=IMP] [GO:0010842 "retina
layer formation" evidence=IMP] [GO:0021634 "optic nerve formation"
evidence=IMP] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0060973 "cell migration involved in heart development"
evidence=IMP] [GO:0001947 "heart looping" evidence=IMP] [GO:0060038
"cardiac muscle cell proliferation" evidence=IMP] [GO:0048596
"embryonic camera-type eye morphogenesis" evidence=IMP] [GO:0000185
"activation of MAPKKK activity" evidence=IMP] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 ZFIN:ZDB-GENE-030605-1 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0030182 GO:GO:0003677 GO:GO:0007417
GO:GO:0004386 GO:GO:0001947 GO:GO:0010842 GO:GO:0014032
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0031101 GO:GO:0060038 GO:GO:0048596
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 GO:GO:0060059 GO:GO:0000185 HOGENOM:HOG000172363
HOVERGEN:HBG056636 CTD:6597 OMA:HKPMESM EMBL:BX322663 EMBL:BC163918
EMBL:BC163920 EMBL:AY205256 EMBL:AY218841 IPI:IPI00493397
RefSeq:NP_853634.1 UniGene:Dr.2414 SMR:Q7ZSY3 STRING:Q7ZSY3
Ensembl:ENSDART00000115110 Ensembl:ENSDART00000134514 GeneID:353295
KEGG:dre:353295 InParanoid:Q7ZSY3 NextBio:20812727 GO:GO:0060973
GO:GO:0021634 Uniprot:Q7ZSY3
Length = 1627
Score = 149 (57.5 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 33/106 (31%), Positives = 58/106 (54%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYED-KFRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y+R+DG+ +E+R ++ F ++ + +LS A G+ L +A+ V+ + WNP
Sbjct: 1135 YLRLDGTTKAEDRGMLLKNFNDPSHQYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQ 1194
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA+DRAHRIGQQ+ V + L + ++ + KL+V +
Sbjct: 1195 DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKV 1240
>UNIPROTKB|P51532 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0016514
"SWI/SNF complex" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0071564 "npBAF complex" evidence=ISS;IDA]
[GO:0071565 "nBAF complex" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=IC;IDA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IDA] [GO:0000790
"nuclear chromatin" evidence=IDA] [GO:0071778 "WINAC complex"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IDA]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=IMP] [GO:0050681 "androgen receptor binding"
evidence=IPI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IGI] [GO:0045749 "negative regulation of S phase of
mitotic cell cycle" evidence=TAS] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0002039 "p53 binding" evidence=IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0003713 "transcription
coactivator activity" evidence=IMP;NAS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=NAS]
[GO:0006337 "nucleosome disassembly" evidence=IDA] [GO:0043923
"positive regulation by host of viral transcription" evidence=IMP]
[GO:0030957 "Tat protein binding" evidence=IPI] [GO:0003407 "neural
retina development" evidence=IEP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IMP] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0003714 GO:GO:0007399
GO:GO:0051091 GO:GO:0030308 GO:GO:0003677 GO:GO:0006338
GO:GO:0000122 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0003407 GO:GO:0071565 GO:GO:0004386 EMBL:CH471106
GO:GO:0001105 GO:GO:0045749 Orphanet:1465 GO:GO:0006337
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 GO:GO:0071778 KO:K11647 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:AC011442 GO:GO:0008094 GO:GO:0060766
GO:GO:0043923 EMBL:AC011485 HOGENOM:HOG000172363 HOVERGEN:HBG056636
CTD:6597 EMBL:U29175 EMBL:D26156 EMBL:AF254822 EMBL:EU430756
EMBL:EU430757 EMBL:EU430758 EMBL:EU430759 EMBL:AC006127
IPI:IPI00293426 IPI:IPI00900285 IPI:IPI00900328 IPI:IPI00900338
IPI:IPI01016040 PIR:S45252 RefSeq:NP_001122316.1
RefSeq:NP_001122317.1 RefSeq:NP_001122318.1 RefSeq:NP_001122319.1
RefSeq:NP_001122320.1 RefSeq:NP_003063.2 UniGene:Hs.327527 PDB:2GRC
PDB:2H60 PDB:3UVD PDBsum:2GRC PDBsum:2H60 PDBsum:3UVD
ProteinModelPortal:P51532 SMR:P51532 DIP:DIP-24249N IntAct:P51532
MINT:MINT-204078 STRING:P51532 PhosphoSite:P51532 DMDM:116242792
PaxDb:P51532 PRIDE:P51532 Ensembl:ENST00000344626
Ensembl:ENST00000413806 Ensembl:ENST00000429416
Ensembl:ENST00000444061 Ensembl:ENST00000450717
Ensembl:ENST00000541122 GeneID:6597 KEGG:hsa:6597 UCSC:uc002mqf.4
GeneCards:GC19P011071 HGNC:HGNC:11100 HPA:CAB004208 MIM:603254
MIM:613325 MIM:614609 neXtProt:NX_P51532 Orphanet:231108
PharmGKB:PA35950 ChiTaRS:SMARCA4 EvolutionaryTrace:P51532
GenomeRNAi:6597 NextBio:25661 ArrayExpress:P51532 Bgee:P51532
CleanEx:HS_SMARCA4 Genevestigator:P51532 GermOnline:ENSG00000127616
Uniprot:P51532
Length = 1647
Score = 149 (57.5 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 33/106 (31%), Positives = 58/106 (54%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYE-DKFRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y+R+DG+ +E+R ++ F ++ + +LS A G+ L +A+ V+ + WNP
Sbjct: 1123 YLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQ 1182
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA+DRAHRIGQQ+ V + L + ++ + KL+V +
Sbjct: 1183 DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKV 1228
>UNIPROTKB|Q9HBD4 [details] [associations]
symbol:SMARCA4 "SMARCA4 isoform 2" species:9606 "Homo
sapiens" [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst
growth" evidence=IEA] [GO:0001835 "blastocyst hatching"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005719 "nuclear
euchromatin" evidence=IEA] [GO:0005726 "perichromatin fibrils"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0030198 "extracellular matrix organization"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030900 "forebrain development" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0043388 "positive regulation of DNA binding" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0048730 "epidermis morphogenesis" evidence=IEA]
[GO:0060318 "definitive erythrocyte differentiation" evidence=IEA]
[GO:0060347 "heart trabecula formation" evidence=IEA] [GO:0071564
"npBAF complex" evidence=IEA] [GO:0071565 "nBAF complex"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
EMBL:CH471106 GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792
GO:GO:0060347 GO:GO:0043966 GO:GO:0043388 KO:K11647
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:AC011442
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 EMBL:AC011485
GO:GO:0005726 HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
CTD:6597 EMBL:AF254822 EMBL:AC006127 UniGene:Hs.327527 GeneID:6597
KEGG:hsa:6597 HGNC:HGNC:11100 PharmGKB:PA35950 ChiTaRS:SMARCA4
GenomeRNAi:6597 NextBio:25661 IPI:IPI00900269 RefSeq:NP_001122321.1
SMR:Q9HBD4 STRING:Q9HBD4 Ensembl:ENST00000358026 UCSC:uc010dxo.3
Uniprot:Q9HBD4
Length = 1679
Score = 149 (57.5 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 33/106 (31%), Positives = 58/106 (54%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYE-DKFRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y+R+DG+ +E+R ++ F ++ + +LS A G+ L +A+ V+ + WNP
Sbjct: 1123 YLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQ 1182
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA+DRAHRIGQQ+ V + L + ++ + KL+V +
Sbjct: 1183 DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKV 1228
>GENEDB_PFALCIPARUM|PFF1185w [details] [associations]
symbol:PFF1185w "iswi protein homologue"
species:5833 "Plasmodium falciparum" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0006338 "chromatin remodeling" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00490 GO:GO:0005524
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003723
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL844505 RefSeq:XP_966228.1 ProteinModelPortal:C6KT82
IntAct:C6KT82 PRIDE:C6KT82 EnsemblProtists:PFF1185w:mRNA
GeneID:3885918 KEGG:pfa:PFF1185w EuPathDB:PlasmoDB:PF3D7_0624600
OMA:EERMAFR ProtClustDB:CLSZ2515339 Uniprot:C6KT82
Length = 2719
Score = 151 (58.2 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 35/90 (38%), Positives = 52/90 (57%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDK-FRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y+R+DGS R+ + +F D + + ++S A GI LTAAN V+ + WNP I
Sbjct: 1120 YMRLDGSTNKLIRELDIREFNLSDSIYFIYLISTRAGGLGINLTAANHVIMYDEDWNPFI 1179
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADD 89
QA DRAHRIGQ+ V + L+ + T ++
Sbjct: 1180 DLQAIDRAHRIGQKREVNVWKLMTEWTVEE 1209
>UNIPROTKB|C6KT82 [details] [associations]
symbol:PFF1185w "Smarca-related protein" species:36329
"Plasmodium falciparum 3D7" [GO:0003723 "RNA binding" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00490 GO:GO:0005524
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003723
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL844505 RefSeq:XP_966228.1 ProteinModelPortal:C6KT82
IntAct:C6KT82 PRIDE:C6KT82 EnsemblProtists:PFF1185w:mRNA
GeneID:3885918 KEGG:pfa:PFF1185w EuPathDB:PlasmoDB:PF3D7_0624600
OMA:EERMAFR ProtClustDB:CLSZ2515339 Uniprot:C6KT82
Length = 2719
Score = 151 (58.2 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 35/90 (38%), Positives = 52/90 (57%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDK-FRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y+R+DGS R+ + +F D + + ++S A GI LTAAN V+ + WNP I
Sbjct: 1120 YMRLDGSTNKLIRELDIREFNLSDSIYFIYLISTRAGGLGINLTAANHVIMYDEDWNPFI 1179
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADD 89
QA DRAHRIGQ+ V + L+ + T ++
Sbjct: 1180 DLQAIDRAHRIGQKREVNVWKLMTEWTVEE 1209
>ZFIN|ZDB-GENE-050419-256 [details] [associations]
symbol:chd2 "chromodomain helicase DNA binding
protein 2" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-050419-256
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 EMBL:BX649578 IPI:IPI00999128
Ensembl:ENSDART00000127730 ArrayExpress:E7F7R2 Bgee:E7F7R2
Uniprot:E7F7R2
Length = 1813
Score = 149 (57.5 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 37/88 (42%), Positives = 48/88 (54%)
Query: 3 RIDGSVGSEERKSVVDQFQYEDKFRVA-VLSITAANSGITLTAANLVVFAELFWNPGILT 61
R+DGS+ E RK +D F E +LS A GI L +A+ VV + WNP
Sbjct: 841 RLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDL 900
Query: 62 QAEDRAHRIGQQDSVLIQYLVAKQTADD 89
QA+ RAHRIGQ+ V I LV K T ++
Sbjct: 901 QAQARAHRIGQKKQVNIYRLVTKGTVEE 928
>TAIR|locus:2062840 [details] [associations]
symbol:SYD "SPLAYED" species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009908 "flower development"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=IPI] [GO:0010199 "organ
boundary specification between lateral organs and the meristem"
evidence=IGI] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=NAS] [GO:0040029 "regulation of gene expression,
epigenetic" evidence=RCA;IMP] [GO:0009611 "response to wounding"
evidence=IEP] [GO:0005829 "cytosol" evidence=IDA] [GO:0000226
"microtubule cytoskeleton organization" evidence=RCA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006306
"DNA methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0050826 "response to
freezing" evidence=RCA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00951 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GO:GO:0009611 GO:GO:0006355
GO:GO:0003677 GO:GO:0003682 GO:GO:0016887 GO:GO:0004386
GO:GO:0009908 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 GO:GO:0010199 GO:GO:0040029 InterPro:IPR014012
PROSITE:PS51204 IPI:IPI00516285 RefSeq:NP_850116.1 UniGene:At.22414
PRIDE:F4IHS2 EnsemblPlants:AT2G28290.1 GeneID:817375
KEGG:ath:AT2G28290 OMA:SDLYAIS Uniprot:F4IHS2
Length = 3574
Score = 152 (58.6 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 31/79 (39%), Positives = 47/79 (59%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDK-FRVAVLSITAANSGITLTAANLVVFAELFWNPGI 59
Y+R+DG +R +++D F F + +LSI A G+ L AA+ V+ + WNP +
Sbjct: 1116 YLRLDGQTSGGDRGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQV 1175
Query: 60 LTQAEDRAHRIGQQDSVLI 78
QA+ RAHRIGQ+ VL+
Sbjct: 1176 DLQAQARAHRIGQKKDVLV 1194
>TAIR|locus:2196115 [details] [associations]
symbol:AT1G02670 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006281 "DNA repair"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K15083 IPI:IPI00540835
RefSeq:NP_171767.1 UniGene:At.51462 ProteinModelPortal:F4HXL1
SMR:F4HXL1 PRIDE:F4HXL1 EnsemblPlants:AT1G02670.1 GeneID:839532
KEGG:ath:AT1G02670 OMA:THITFAR Uniprot:F4HXL1
Length = 678
Score = 144 (55.7 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 30/100 (30%), Positives = 55/100 (55%)
Query: 2 IRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGILT 61
+++ GS+ + + + F+ E RV ++S+ A + LTAA+ V + +WNP +
Sbjct: 553 VQLVGSMSKAAKDAALKNFKEEPDCRVLLMSLQAGGVALNLTAASHVFMMDPWWNPAVER 612
Query: 62 QAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDV 101
QA+DR HRIGQ V + + ++T ++ + L K D+
Sbjct: 613 QAQDRIHRIGQCKPVRVVRFIMEKTVEEKILTLQKKKEDL 652
>WB|WBGene00007053 [details] [associations]
symbol:chd-7 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00592
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR023780 KO:K14437 GeneTree:ENSGT00560000077077
EMBL:FO080504 EMBL:FO080107 RefSeq:NP_491426.2 PaxDb:O61845
EnsemblMetazoa:T04D1.4 GeneID:172079 KEGG:cel:CELE_T04D1.4
UCSC:T04D1.4 CTD:172079 WormBase:T04D1.4 HOGENOM:HOG000213105
InParanoid:O61845 OMA:LLAFRME NextBio:873933 Uniprot:O61845
Length = 2967
Score = 151 (58.2 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 36/104 (34%), Positives = 55/104 (52%)
Query: 3 RIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANS-GITLTAANLVVFAELFWNPGILT 61
RIDG+V + R++ +D+F E+ R L T A GI LTAA+ V+ + WNP
Sbjct: 1566 RIDGNVRGDLRQAAIDRFSKENSDRFVFLLCTRAGGLGINLTAADTVIIFDSDWNPQNDL 1625
Query: 62 QAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA+ R HRIGQ+ V + L+ T + ++ KL + +
Sbjct: 1626 QAQARCHRIGQKKLVKVYRLITSNTYEREMFDKASLKLGLDKAV 1669
>DICTYBASE|DDB_G0284171 [details] [associations]
symbol:DDB_G0284171 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 dictyBase:DDB_G0284171
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006357 EMBL:AAFI02000063 GO:GO:0004003 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR025260 Pfam:PF13907
KO:K11367 RefSeq:XP_638708.1 ProteinModelPortal:Q54Q16
STRING:Q54Q16 EnsemblProtists:DDB0220640 GeneID:8624452
KEGG:ddi:DDB_G0284171 InParanoid:Q54Q16 OMA:DINATEF
ProtClustDB:CLSZ2732060 Uniprot:Q54Q16
Length = 1917
Score = 149 (57.5 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 35/88 (39%), Positives = 51/88 (57%)
Query: 3 RIDGSVGSEERKSVVDQFQYEDKFRVA-VLSITAANSGITLTAANLVVFAELFWNPGILT 61
R+DGS+ E+R +D+F D +LS A GI L+ A+ V+ + WNP
Sbjct: 1110 RLDGSMSREKRSQAMDRFNAVDSPDFCFLLSTKAGGLGINLSTADTVIIFDSDWNPQNDL 1169
Query: 62 QAEDRAHRIGQQDSVLIQYLVAKQTADD 89
QAE RAHRIGQ++ V I LV+K + ++
Sbjct: 1170 QAEARAHRIGQKNHVNIYRLVSKSSVEE 1197
>UNIPROTKB|I3LRQ2 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
GeneTree:ENSGT00560000076896 EMBL:CT954235 EMBL:CU466964
Ensembl:ENSSSCT00000027293 Uniprot:I3LRQ2
Length = 1051
Score = 146 (56.5 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 36/88 (40%), Positives = 48/88 (54%)
Query: 3 RIDGSVGSEERKSVVDQFQYEDKFRVA-VLSITAANSGITLTAANLVVFAELFWNPGILT 61
R+DGS+ E RK +D F + +LS A GI L +A+ VV + WNP
Sbjct: 838 RLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDL 897
Query: 62 QAEDRAHRIGQQDSVLIQYLVAKQTADD 89
QA+ RAHRIGQ+ V I LV K T ++
Sbjct: 898 QAQARAHRIGQKKQVNIYRLVTKGTVEE 925
>UNIPROTKB|H0YJG4 [details] [associations]
symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AL135744 EMBL:AL161747
HGNC:HGNC:20153 Ensembl:ENST00000555935 Uniprot:H0YJG4
Length = 873
Score = 145 (56.1 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 35/106 (33%), Positives = 53/106 (50%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANS-GITLTAANLVVFAELFWNPGI 59
Y RIDG V R++ +D+F D R L T A GI LTAA+ + + WNP
Sbjct: 402 YERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQN 461
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA+ R HRIGQ +V + L+ + + + ++ KL + +
Sbjct: 462 DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAV 507
>SGD|S000003796 [details] [associations]
symbol:RAD26 "Protein involved in transcription-coupled
nucleotide excision repair" species:4932 "Saccharomyces cerevisiae"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006283
"transcription-coupled nucleotide-excision repair"
evidence=IGI;IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 SGD:S000003796 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 EMBL:BK006943 GO:GO:0003677
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006283 GO:GO:0008094
GeneTree:ENSGT00590000083118 HOGENOM:HOG000170952 KO:K10841
EMBL:X81635 EMBL:L26910 EMBL:Z49535 PIR:JC2227 RefSeq:NP_012569.1
ProteinModelPortal:P40352 SMR:P40352 DIP:DIP-3008N IntAct:P40352
MINT:MINT-439055 STRING:P40352 PaxDb:P40352 PeptideAtlas:P40352
EnsemblFungi:YJR035W GeneID:853492 KEGG:sce:YJR035W CYGD:YJR035w
OMA:DENRIME OrthoDB:EOG44TSGZ NextBio:974125 Genevestigator:P40352
GermOnline:YJR035W Uniprot:P40352
Length = 1085
Score = 146 (56.5 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 32/92 (34%), Positives = 53/92 (57%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y+R+DG+ + R+S+VD+F E F V +L+ G+ LT AN ++ + WNP
Sbjct: 699 YLRMDGTTNIKGRQSLVDRFNNES-FDVFLLTTRVGGLGVNLTGANRIIIFDPDWNPSTD 757
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLW 92
QA +RA RIGQ+ V I L+ + ++ ++
Sbjct: 758 MQARERAWRIGQKREVSIYRLMVGGSIEEKIY 789
>TAIR|locus:2160811 [details] [associations]
symbol:CHR24 "chromatin remodeling 24" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0046686 "response to cadmium ion" evidence=IEP] [GO:0006270
"DNA replication initiation" evidence=RCA] [GO:0006275 "regulation
of DNA replication" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0010051 "xylem and phloem pattern formation" evidence=RCA]
[GO:0048439 "flower morphogenesis" evidence=RCA] [GO:0048519
"negative regulation of biological process" evidence=RCA]
[GO:0051726 "regulation of cell cycle" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046686 GO:GO:0003677 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AF462829 EMBL:AY142010 IPI:IPI00526353 RefSeq:NP_201200.2
UniGene:At.28262 ProteinModelPortal:Q8W103 PaxDb:Q8W103
PRIDE:Q8W103 EnsemblPlants:AT5G63950.1 GeneID:836516
KEGG:ath:AT5G63950 TAIR:At5g63950 HOGENOM:HOG000029838
InParanoid:Q8W103 OMA:VIVYRLM PhylomeDB:Q8W103
ProtClustDB:CLSN2690259 Genevestigator:Q8W103 Uniprot:Q8W103
Length = 1090
Score = 146 (56.5 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 29/92 (31%), Positives = 52/92 (56%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
++RIDG+ + +R V++FQ + +L+ G+TLT A+ V+ + WNP
Sbjct: 775 FLRIDGTTKAPDRLKTVEEFQEGHVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTD 834
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLW 92
Q+ DRA+RIGQ V++ L+ T ++ ++
Sbjct: 835 NQSVDRAYRIGQTKDVIVYRLMTSATVEEKIY 866
>UNIPROTKB|H3BTW3 [details] [associations]
symbol:CHD9 "Chromodomain-helicase-DNA-binding protein 9"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00384 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 EMBL:AC007906
EMBL:AC079416 HGNC:HGNC:25701 Ensembl:ENST00000565803 Bgee:H3BTW3
Uniprot:H3BTW3
Length = 1099
Score = 146 (56.5 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 36/106 (33%), Positives = 53/106 (50%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANS-GITLTAANLVVFAELFWNPGI 59
Y RIDG V R++ +D+F D R L T A GI LTAA+ + + WNP
Sbjct: 751 YERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQN 810
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA+ R HRIGQ +V + LV + + + ++ KL + +
Sbjct: 811 DLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAV 856
>UNIPROTKB|F1NSG3 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008015 "blood circulation" evidence=IEA] [GO:0021545 "cranial
nerve development" evidence=IEA] [GO:0030217 "T cell
differentiation" evidence=IEA] [GO:0030540 "female genitalia
development" evidence=IEA] [GO:0035116 "embryonic hindlimb
morphogenesis" evidence=IEA] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IEA] [GO:0043584 "nose
development" evidence=IEA] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0050890 "cognition" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0060041 "retina development
in camera-type eye" evidence=IEA] [GO:0060123 "regulation of growth
hormone secretion" evidence=IEA] [GO:0060324 "face development"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0003007 "heart morphogenesis" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0007512 "adult heart development" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0007628 "adult
walking behavior" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0040018 GO:GO:0003682
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 IPI:IPI00590082
OMA:TFGVIFD GO:GO:0060123 GeneTree:ENSGT00560000077077
EMBL:AADN02022009 EMBL:AADN02022010 Ensembl:ENSGALT00000024950
ArrayExpress:F1NSG3 Uniprot:F1NSG3
Length = 2248
Score = 149 (57.5 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 37/106 (34%), Positives = 53/106 (50%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANS-GITLTAANLVVFAELFWNPGI 59
Y RIDG V R++ +D+F D R L T A GI LTAA+ + + WNP
Sbjct: 571 YERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQN 630
Query: 60 LTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTKLDVPSPI 105
QA+ R HRIGQ SV I L+ + + + ++ KL + +
Sbjct: 631 DLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAV 676
>POMBASE|SPCP25A2.02c [details] [associations]
symbol:rhp26 "SNF2 family helicase Rhp26" species:4896
"Schizosaccharomyces pombe" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISM]
[GO:0005524 "ATP binding" evidence=ISM] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISM]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 PomBase:SPCP25A2.02c GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0003677 GO:GO:0004003 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006283
HOGENOM:HOG000170952 KO:K10841 OrthoDB:EOG44TSGZ EMBL:AB022912
PIR:T50449 RefSeq:NP_588091.1 ProteinModelPortal:Q9UR24
STRING:Q9UR24 EnsemblFungi:SPCP25A2.02c.1 GeneID:2539473
KEGG:spo:SPCP25A2.02c NextBio:20800635 Uniprot:Q9UR24
Length = 973
Score = 145 (56.1 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 30/92 (32%), Positives = 50/92 (54%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFRVAVLSITAANSGITLTAANLVVFAELFWNPGIL 60
Y R+DGS R+ +VD F + F V +L+ G+ LT A+ V+ + WNP
Sbjct: 669 YCRMDGSTSIALRQDLVDNFNKNEYFDVFLLTTRVGGLGVNLTGADRVILFDPDWNPSTD 728
Query: 61 TQAEDRAHRIGQQDSVLIQYLVAKQTADDYLW 92
QA +RA R+GQ+ V++ L+ T ++ ++
Sbjct: 729 AQARERAWRLGQKKDVVVYRLMTAGTIEEKIY 760
>UNIPROTKB|F1RPI9 [details] [associations]
symbol:LOC100514440 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00550000074619 EMBL:CU928419
EMBL:CU693469 EMBL:CU928840 EMBL:FP102832
Ensembl:ENSSSCT00000013595 OMA:GPDIVIC ArrayExpress:F1RPI9
Uniprot:F1RPI9
Length = 988
Score = 145 (56.1 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 33/100 (33%), Positives = 53/100 (53%)
Query: 1 YIRIDGSVGSEERKSVVDQFQYEDKFR--VAVLSITAANSGITLTAANLVVFAELFWNPG 58
Y R+DGS ++ RK ++F E R + ++S A + GI L AAN V+ + WNP
Sbjct: 804 YYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPS 863
Query: 59 ILTQAEDRAHRIGQQDSVLIQYLVAKQTADDYLWPLVMTK 98
Q+ R +R GQ V + +A+ T +D ++ +TK
Sbjct: 864 YDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTK 903
WARNING: HSPs involving 271 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 105 105 0.00091 102 3 11 22 0.41 30
29 0.39 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 521
No. of states in DFA: 533 (57 KB)
Total size of DFA: 104 KB (2072 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 9.60u 0.22s 9.82t Elapsed: 00:00:01
Total cpu time: 9.62u 0.22s 9.84t Elapsed: 00:00:01
Start: Thu Aug 15 12:39:26 2013 End: Thu Aug 15 12:39:27 2013
WARNINGS ISSUED: 2