BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy12192
         (82 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q8BXR5|NALCN_MOUSE Sodium leak channel non-selective protein OS=Mus musculus GN=Nalcn
            PE=1 SV=2
          Length = 1738

 Score = 72.4 bits (176), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 35/74 (47%), Positives = 48/74 (64%)

Query: 1    MLAREEIEYIIEEEVAKQTIRNWLEACLKKIRATNKQQTSLIAGLRATNEMLHMQDHLED 60
            +LARE++EY IEEEVAKQTIR WL+ CLK+IRA  +Q  S+I  LR + E    +     
Sbjct: 1553 LLAREQLEYTIEEEVAKQTIRMWLKKCLKRIRAKQQQSCSIIHSLRESQEQERSRFLNPP 1612

Query: 61   KTKDKQAEKDTDAN 74
              +  Q  +D++AN
Sbjct: 1613 SIETTQPSEDSNAN 1626


>sp|Q6Q760|NALCN_RAT Sodium leak channel non-selective protein OS=Rattus norvegicus
            GN=Nalcn PE=2 SV=1
          Length = 1738

 Score = 71.2 bits (173), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/74 (47%), Positives = 48/74 (64%)

Query: 1    MLAREEIEYIIEEEVAKQTIRNWLEACLKKIRATNKQQTSLIAGLRATNEMLHMQDHLED 60
            +LARE++EY IEEEVAKQTIR WL+ CLK+IRA  +Q  S+I  LR + +    +     
Sbjct: 1553 LLAREQLEYTIEEEVAKQTIRMWLKKCLKRIRAKQQQSCSIIHSLRESQQQELSRFLNPP 1612

Query: 61   KTKDKQAEKDTDAN 74
              +  Q  +DT+AN
Sbjct: 1613 SIETTQPSEDTNAN 1626


>sp|Q8IZF0|NALCN_HUMAN Sodium leak channel non-selective protein OS=Homo sapiens GN=NALCN
            PE=2 SV=1
          Length = 1738

 Score = 71.2 bits (173), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/74 (47%), Positives = 48/74 (64%)

Query: 1    MLAREEIEYIIEEEVAKQTIRNWLEACLKKIRATNKQQTSLIAGLRATNEMLHMQDHLED 60
            +LARE++EY IEEEVAKQTIR WL+ CLK+IRA  +Q  S+I  LR + +    +     
Sbjct: 1553 LLAREQLEYTIEEEVAKQTIRMWLKKCLKRIRAKQQQSCSIIHSLRESQQQELSRFLNPP 1612

Query: 61   KTKDKQAEKDTDAN 74
              +  Q  +DT+AN
Sbjct: 1613 SIETTQPSEDTNAN 1626


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.310    0.125    0.333 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,897,493
Number of Sequences: 539616
Number of extensions: 800711
Number of successful extensions: 2665
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2658
Number of HSP's gapped (non-prelim): 11
length of query: 82
length of database: 191,569,459
effective HSP length: 53
effective length of query: 29
effective length of database: 162,969,811
effective search space: 4726124519
effective search space used: 4726124519
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)