RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy12194
(2042 letters)
>g1cxp.1 a.93.1.2 (A:,C:) Myeloperoxidase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 570
Score = 378 bits (971), Expect = e-116
Identities = 157/584 (26%), Positives = 234/584 (40%), Gaps = 126/584 (21%)
Query: 568 CDPTSPFRTISGRCNNLVNTEHGRSMTTFSRLLPSVYEDLISTPRV----HSVSGAPLPT 623
C +RTI+G CNN + G S F R LP+ YED S P +G P+
Sbjct: 1 CPEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVAL 60
Query: 624 ARLVSAMVHA---DISHLSNRYSLMVMQLAQTIDHDLTFTPVYRGFFTSIPDCRPCDSRI 680
AR VS + D SLM MQ Q +DHDL FTP C++
Sbjct: 61 ARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPE---------PAVNCETSC 111
Query: 681 TVHPECMPIPIPAGDPYFPQYNRTTGRPLCLPFMRSL--SGQQGFGPREQINQNSAYLDG 738
P C P+ IP DP + C+PF RS R QIN ++++D
Sbjct: 112 VQQPPCFPLKIPPNDPRIKN------QADCIPFFRSCPACPGSNITIRNQINALTSFVDA 165
Query: 739 SLIYGEHACQAKDLRSYDG-----KLNVTLMPGRKDLLPNTPTHP-------ECRSRYCF 786
S++YG A++LR+ +N + LLP H CF
Sbjct: 166 SMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCF 225
Query: 787 VAGDGRASEQPGLTAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIMVGQWQHIVY 846
+AGD R+SE P LT+MHT+L+REHNRLA +L +NP W+ E+L+Q AR+I+ Q I Y
Sbjct: 226 LAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITY 285
Query: 847 NEFLPRLLGLNAVNLYGLKLSPTGYYKGYNDNCKPNIMTEFATAAYRIGHSLLRPFIPRL 906
++LP +LG A+ Y Y+ YND+ P I F T A+R GH+L++PF+ RL
Sbjct: 286 RDYLPLVLGPTAMRKYL------PTYRSYNDSVDPRIANVF-TNAFRYGHTLIQPFMFRL 338
Query: 907 VIARFRRIYASP---------DDVDLFPGGLSERPVAARLRRIYASPDDVDLFPGGLSEQ 957
R++ + +P + G + + + + + E+
Sbjct: 339 D-NRYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRER 397
Query: 958 PVAVIVRFRRIYAS-------------------------PDDVDLFPGGLSERPVAARLR 992
++R + P+ V L +A +L
Sbjct: 398 LFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLM 457
Query: 993 RIYASPDDVDLFPGGLSERPVAVGTLSFKLHCLKGYRTFEKKSCEKTHTNIDNVDLLIGG 1052
Y +P+++D++ GG+SE
Sbjct: 458 EQYGTPNNIDIWMGGVSEPLK--------------------------------------- 478
Query: 1053 LLENSEPGSALGITFSCLLARQFSVLKDSDRFWYENDFPPTSFS 1096
+G +C++ QF L+D DRFW+EN FS
Sbjct: 479 ------RKGRVGPLLACIIGTQFRKLRDGDRFWWEN---EGVFS 513
Score = 223 bits (568), Expect = 2e-62
Identities = 85/260 (32%), Positives = 128/260 (49%), Gaps = 26/260 (10%)
Query: 1645 YYTYHTLIEGTVT------AEVLSDGHVLLRDHFFNPDLIYKPNMIDEMMRGLAGTPME- 1697
+ HTLI+ + + + V L FF + ID ++RGL TP +
Sbjct: 324 FRYGHTLIQPFMFRLDNRYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKL 383
Query: 1698 -NLDQFVTGEITNHLFEEKGRPHSGVDLPALNIQRARDHGVPSYNEYRALCNLKKAKTWA 1756
+Q EI LFE+ G+DLPALN+QR+RDHG+P YN +R C L + +T
Sbjct: 384 NRQNQIAVDEIRERLFEQ--VMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVG 441
Query: 1757 DLSREIPD-EVIARFRRIYASPDDVDLFPGGLSERPVAGGMVGPTFACIIGLQFRQLRKC 1815
L + + ++ + Y +P+++D++ GG+SE G VGP ACIIG QFR+LR
Sbjct: 442 QLGTVLRNLKLARKLMEQYGTPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDG 501
Query: 1816 DRFWYETDDPVIRFTEPQLQEIRKATLAKEIKKATLAKVICANMDYPGEITNHLFEEKGR 1875
DRFW+E + F+ Q Q + + +L ++IC N N++F
Sbjct: 502 DRFWWENEGV---FSMQQRQALA---------QISLPRIICDNTGITTVSKNNIFMSNSY 549
Query: 1876 PHSGV---DLPALNIQRARD 1892
P V LPALN+ R+
Sbjct: 550 PRDFVNCSTLPALNLASWRE 569
Score = 194 bits (495), Expect = 4e-53
Identities = 110/510 (21%), Positives = 166/510 (32%), Gaps = 73/510 (14%)
Query: 1486 CDPTSPFRTISGRCNNLVNTEHGRSMTTFSRLLPSVYEDLISTPRV----HSVSGAPLPT 1541
C +RTI+G CNN + G S F R LP+ YED S P +G P+
Sbjct: 1 CPEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVAL 60
Query: 1542 ARLVSAMVHA---DISHLSNRYSLMVMQLAQTIDHDLTFTPVYRGFF----TSIPDCRP- 1593
AR VS + D SLM MQ Q +DHDL FTP P C P
Sbjct: 61 ARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPAVNCETSCVQQPPCFPL 120
Query: 1594 ----CDSRITVHPECMPIP-----IPAGDPYFPQYNRTTGRPLCLPFMRSLSGKKTGEPS 1644
D RI +C+P P + + +
Sbjct: 121 KIPPNDPRIKNQADCIPFFRSCPACPGSNITIRNQINALTSFVDASMVYGSEEPLARNLR 180
Query: 1645 YYTYHTLIEGTVTAEVLSDGHVLLRDHFFNPDLIYKPNMIDEMMRGLAGTPMENLDQFVT 1704
+ + V +G LL + D N + LAG + +T
Sbjct: 181 NMSNQLGLLA-VNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRSSEMPELT 239
Query: 1705 ------GEITNHLFEEKGRPHSGVDLPALNIQRAR-----DHGVPSYNEY-RALCNLKKA 1752
N L E + D L Q AR + +Y +Y +
Sbjct: 240 SMHTLLLREHNRLATELKSLNPRWDGERL-YQEARKIVGAMVQIITYRDYLPLVLGPTAM 298
Query: 1753 KTWADLSR--------EIPDEVIARFRRIYA-SPDDVDLFPGGLSERPVAGGMVGPTFAC 1803
+ + R I + FR + +
Sbjct: 299 RKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQPMEPNPR-------- 350
Query: 1804 IIGLQFRQLRKCDRFWYETDDPVIRFTEPQLQEIRKATLAKEIKKATLAKVICANMDYPG 1863
+ L DP++R ++ + N
Sbjct: 351 -VPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQ-----------------NQIAVD 392
Query: 1864 EITNHLFEEKGRPHSGVDLPALNIQRARDHGVPSYNEYRALCNLKKAKTWADLSREIPD- 1922
EI LFE+ G+DLPALN+QR+RDHG+P YN +R C L + +T L + +
Sbjct: 393 EIRERLFEQ--VMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNL 450
Query: 1923 EVIARFRRIYASPDDVDLFPGGLSERPVAD 1952
++ + Y +P+++D++ GG+SE
Sbjct: 451 KLARKLMEQYGTPNNIDIWMGGVSEPLKRK 480
Score = 136 bits (343), Expect = 1e-33
Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 5/139 (3%)
Query: 1310 NHELLSDGHVLLRDHFFNPDLIYKPNMIDEMMRGLAGTPME--NLDQFVTGEITNHLFEE 1367
+ + V L FF + ID ++RGL TP + +Q EI LFE+
Sbjct: 342 YQPMEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQ 401
Query: 1368 KGRPHSGVDLPALNIQRARDHGVPSYNEYRALCNLKKAKTWADLSREIPD-EVIARFRRI 1426
G+DLPALN+QR+RDHG+P YN +R C L + +T L + + ++ +
Sbjct: 402 --VMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQ 459
Query: 1427 YASPDDVDLFPGGLSERPV 1445
Y +P+++D++ GG+SE
Sbjct: 460 YGTPNNIDIWMGGVSEPLK 478
Score = 77.1 bits (189), Expect = 1e-14
Identities = 28/70 (40%), Positives = 40/70 (57%)
Query: 144 VSCNSPSNLMYKLFELEHNRLVTELAEVNPDWSEDVLFEEARSIVIAQIQHVTYDEYLPV 203
S M+ L EHNRL TEL +NP W + L++EAR IV A +Q +TY +YLP+
Sbjct: 232 SSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPL 291
Query: 204 LIGECVNPDW 213
++G +
Sbjct: 292 VLGPTAMRKY 301
Score = 74.8 bits (183), Expect = 5e-14
Identities = 27/54 (50%), Positives = 38/54 (70%)
Query: 1 MYKLFELEHNRLVTELAEVNPDWSEDVLFEEARSIVIAQIQHVTYDEYLPVLIG 54
M+ L EHNRL TEL +NP W + L++EAR IV A +Q +TY +YLP+++G
Sbjct: 241 MHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLG 294
Score = 58.6 bits (141), Expect = 6e-09
Identities = 36/147 (24%), Positives = 57/147 (38%), Gaps = 9/147 (6%)
Query: 113 VNQATGFLDGSKIYGSDSILSRT----QYGAYLQCVSCNSPSN----LMYKLFELEHNRL 164
+N T F+D S +YGS+ L+R L V+ N L + + L
Sbjct: 156 INALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLL 215
Query: 165 VTELAEVNPDWSEDVLFEEARSIVIAQIQHVTYDEYLPVLIGECVNPDWSEGVLSEEARS 224
A + + D E + + L + NP W L +EAR
Sbjct: 216 TNRSARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSL-NPRWDGERLYQEARK 274
Query: 225 IVIAQIQHVTYDEYLPVLIGECVNPDW 251
IV A +Q +TY +YLP+++G +
Sbjct: 275 IVGAMVQIITYRDYLPLVLGPTAMRKY 301
Score = 51.7 bits (123), Expect = 8e-07
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 248 NPDWSEGVLSEEARSIVIAQIQHVTYDEYLPVLIGECVNPDW 289
NP W L +EAR IV A +Q +TY +YLP+++G +
Sbjct: 260 NPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLGPTAMRKY 301
Score = 51.7 bits (123), Expect = 8e-07
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 286 NPDWSEGVLSEEARSIVIAQIQHVTYDEYLPVLIGECVNPDW 327
NP W L +EAR IV A +Q +TY +YLP+++G +
Sbjct: 260 NPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLGPTAMRKY 301
Score = 51.7 bits (123), Expect = 8e-07
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 324 NPDWSEGVLSEEARSIVIAQIQHVTYDEYLPVLIGECVNPDW 365
NP W L +EAR IV A +Q +TY +YLP+++G +
Sbjct: 260 NPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLGPTAMRKY 301
Score = 51.7 bits (123), Expect = 8e-07
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 362 NPDWSEGVLSEEARSIVIAQIQHVTYDEYLPVLIGECVNPDW 403
NP W L +EAR IV A +Q +TY +YLP+++G +
Sbjct: 260 NPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLGPTAMRKY 301
Score = 51.7 bits (123), Expect = 8e-07
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 400 NPDWSEGVLSEEARSIVIAQIQHVTYDEYLPVLIGECVNPDW 441
NP W L +EAR IV A +Q +TY +YLP+++G +
Sbjct: 260 NPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLGPTAMRKY 301
Score = 51.3 bits (122), Expect = 1e-06
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 438 NPDWSEGVLSEEARSIVIAQIQHVTYDEYLPVLIGENV 475
NP W L +EAR IV A +Q +TY +YLP+++G
Sbjct: 260 NPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLGPTA 297
Score = 37.8 bits (87), Expect = 0.017
Identities = 10/37 (27%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 1238 TNEKGTMQQNVLEMPNDFTNLRVPCNALPEININMWK 1274
T + N+ M N + V C+ LP +N+ W+
Sbjct: 533 TGITTVSKNNIF-MSNSYPRDFVNCSTLPALNLASWR 568
>d1cvua1 a.93.1.2 (A:74-583) Prostaglandin H2 synthase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 511
Score = 269 bits (690), Expect = 3e-79
Identities = 88/527 (16%), Positives = 138/527 (26%), Gaps = 145/527 (27%)
Query: 594 TTFSRLLPSVYEDLISTPRVHSVSGAPLPTARLVSAMVHA--DISHLSNRYSLMVMQLAQ 651
+ ++R LP V +D + V LP ++ V V + ++M AQ
Sbjct: 74 SYYTRALPPVADDCPTPMGV--KGNKELPDSKEVLEKVLLRREFIPDPQGSNMMFAFFAQ 131
Query: 652 TIDHDLTFTPVYRGFFTSIPDCRPCDSRITVHPECMPIPIPAGDPYFPQYNRTTGRPLCL 711
F T
Sbjct: 132 HFTAQF--------FKTDHKRGP------------------------GFTRGLG------ 153
Query: 712 PFMRSLSGQQGFGPREQINQNSAYLDGSLIYGEHACQAKDLRSY-DGKLNVTLMPGRKDL 770
+D + IYGE + LR + DGKL + G +
Sbjct: 154 ----------------------HGVDLNHIYGETLDRQHKLRLFKDGKLKYQ-VIGGEVY 190
Query: 771 LPNTPT-------HPECRSRYCFVAGDGRASEQPGLTAMHTILMREHNRLAEQLVQINPH 823
P P F G PGL TI +REH R+ + L Q +P
Sbjct: 191 PPTVKDTQVEMIYPPHIPENLQFAVGQEVFGLVPGLMMYATIWLREHQRVCDILKQEHPE 250
Query: 824 WNDEQLFQHARRIMVGQWQHIVYNEFLPRLLGLNAVNLYGLKLSPTGYYKGYNDNCKPNI 883
W DEQLFQ ++ I++G+ IV +++ L G + + +N +
Sbjct: 251 WGDEQLFQTSKLILIGETIKIVIEDYVQHLSGYHFKLKFDP-------ELLFNQQFQYQN 303
Query: 884 MTEFATAAYRIGHSLLRPFIPRLVIARFRRIYASPDDVDLFPGGLSERPVAARLRRIYAS 943
H LL S L E + +
Sbjct: 304 RIASEFNTLYHWHPLLPDTFNI------EDQEYSFKQFLYNNSILLEHGLTQFVESFTRQ 357
Query: 944 P----DDVDLFPGGLSEQPVAVIVRFR----------RIYASPDDVDLFPGGLSERPVAA 989
P + A I + R R S F E+ +AA
Sbjct: 358 IAGRVAGGRNVPIAVQAVAKASIDQSREMKYQSLNEYRKRFSLKPYTSFEELTGEKEMAA 417
Query: 990 RLRRIYASPDDVDLFPGGLSERPVAVGTLSFKLHCLKGYRTFEKKSCEKTHTNIDNVDLL 1049
L+ +Y+ D ++L+P L E+P
Sbjct: 418 ELKALYSDIDVMELYPALLVEKPR------------------------------------ 441
Query: 1050 IGGLLENSEPGSALGITFSCLLARQFSVLKDSDRFWYENDFPPTSFS 1096
P + G T L A + + P++F
Sbjct: 442 ---------PDAIFGETMVELGAPFSLKGLMGNPICSPQYWKPSTFG 479
Score = 208 bits (531), Expect = 3e-58
Identities = 37/217 (17%), Positives = 79/217 (36%), Gaps = 28/217 (12%)
Query: 1645 YYTYHTLIEGTVTAEVLSDGHVLLRDHFFNPDLIYKPNMIDEMMRGLAGTPMENLDQFVT 1704
Y +H L+ T + D + +N ++ + + + + T
Sbjct: 312 LYHWHPLLPDTFN---IEDQEYSFKQFLYNNSILLEHGL-TQFVESF------------T 355
Query: 1705 GEITNHLFEEKGRPHSGVDLPALNIQRARDHGVPSYNEYRALCNLKKAKTWADLSREIPD 1764
+I + + P + + +I ++R+ S NEYR +LK ++ +L+
Sbjct: 356 RQIAGRVAGGRNVPIAVQAVAKASIDQSREMKYQSLNEYRKRFSLKPYTSFEELTG--EK 413
Query: 1765 EVIARFRRIYASPDDVDLFPGGLSERPVAGGMVGPTFACIIGLQFRQLRKCDRFWYETDD 1824
E+ A + +Y+ D ++L+P L E+P + G T + + +
Sbjct: 414 EMAAELKALYSDIDVMELYPALLVEKPRPDAIFGETMVELGAPFSLKGLMGNPICSPQYW 473
Query: 1825 PVIRFT-EPQLQEIRKATLAKEIKKATLAKVICANMD 1860
F E + I A++ +IC N+
Sbjct: 474 KPSTFGGEVGFKIIN---------TASIQSLICNNVK 501
Score = 126 bits (317), Expect = 2e-30
Identities = 25/138 (18%), Positives = 57/138 (41%), Gaps = 15/138 (10%)
Query: 1309 PNHELLSDGHVLLRDHFFNPDLIYKPNMIDEMMRGLAGTPMENLDQFVTGEITNHLFEEK 1368
P+ + D + +N ++ + + + + T +I + +
Sbjct: 320 PDTFNIEDQEYSFKQFLYNNSILLEHGL-TQFVESF------------TRQIAGRVAGGR 366
Query: 1369 GRPHSGVDLPALNIQRARDHGVPSYNEYRALCNLKKAKTWADLSREIPDEVIARFRRIYA 1428
P + + +I ++R+ S NEYR +LK ++ +L+ E+ A + +Y+
Sbjct: 367 NVPIAVQAVAKASIDQSREMKYQSLNEYRKRFSLKPYTSFEELTG--EKEMAAELKALYS 424
Query: 1429 SPDDVDLFPGGLSERPVA 1446
D ++L+P L E+P
Sbjct: 425 DIDVMELYPALLVEKPRP 442
Score = 110 bits (275), Expect = 3e-25
Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 1864 EITNHLFEEKGRPHSGVDLPALNIQRARDHGVPSYNEYRALCNLKKAKTWADLSREIPDE 1923
+I + + P + + +I ++R+ S NEYR +LK ++ +L+ E
Sbjct: 357 QIAGRVAGGRNVPIAVQAVAKASIDQSREMKYQSLNEYRKRFSLKPYTSFEELTG--EKE 414
Query: 1924 VIARFRRIYASPDDVDLFPGGLSERPVAD 1952
+ A + +Y+ D ++L+P L E+P D
Sbjct: 415 MAAELKALYSDIDVMELYPALLVEKPRPD 443
Score = 91.1 bits (226), Expect = 4e-19
Identities = 24/184 (13%), Positives = 54/184 (29%), Gaps = 43/184 (23%)
Query: 67 PSGKEISHKI---KTSPQPHEYLSNFVGLWSQLIRDDLTSANTTTAKKVVNQATGFLDGS 123
P KE+ K+ + + + ++Q + +D +
Sbjct: 100 PDSKEVLEKVLLRREFIPDPQGSNMMFAFFAQHFTAQFFKTDHKRGPGFTRGLGHGVDLN 159
Query: 124 KIYGSD----------------------------------------SILSRTQYGAYLQC 143
IYG I Q+ +
Sbjct: 160 HIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQFAVGQEV 219
Query: 144 VSCNSPSNLMYKLFELEHNRLVTELAEVNPDWSEDVLFEEARSIVIAQIQHVTYDEYLPV 203
+ ++ EH R+ L + +P+W ++ LF+ ++ I+I + + ++Y+
Sbjct: 220 FGLVPGLMMYATIWLREHQRVCDILKQEHPEWGDEQLFQTSKLILIGETIKIVIEDYVQH 279
Query: 204 LIGE 207
L G
Sbjct: 280 LSGY 283
Score = 73.0 bits (179), Expect = 2e-13
Identities = 13/52 (25%), Positives = 30/52 (57%)
Query: 4 LFELEHNRLVTELAEVNPDWSEDVLFEEARSIVIAQIQHVTYDEYLPVLIGE 55
++ EH R+ L + +P+W ++ LF+ ++ I+I + + ++Y+ L G
Sbjct: 232 IWLREHQRVCDILKQEHPEWGDEQLFQTSKLILIGETIKIVIEDYVQHLSGY 283
Score = 59.9 bits (145), Expect = 2e-09
Identities = 14/69 (20%), Positives = 24/69 (34%), Gaps = 4/69 (5%)
Query: 1512 TTFSRLLPSVYEDLISTPRVHSVSGAPLPTARLVSAMVHA--DISHLSNRYSLMVMQLAQ 1569
+ ++R LP V +D + V LP ++ V V + ++M AQ
Sbjct: 74 SYYTRALPPVADDCPTPMGV--KGNKELPDSKEVLEKVLLRREFIPDPQGSNMMFAFFAQ 131
Query: 1570 TIDHDLTFT 1578
T
Sbjct: 132 HFTAQFFKT 140
Score = 53.0 bits (127), Expect = 3e-07
Identities = 19/121 (15%), Positives = 43/121 (35%)
Query: 400 NPDWSEGVLSEEARSIVIAQIQHVTYDEYLPVLIGECVNPDWSEGVLSEEARSIVIAQIQ 459
+P+W + L + ++ I+I + + ++Y+ L G + +L +
Sbjct: 248 HPEWGDEQLFQTSKLILIGETIKIVIEDYVQHLSGYHFKLKFDPELLFNQQFQYQNRIAS 307
Query: 460 HVTYDEYLPVLIGENVDVDDLLESVNLILQEQSEKPNISPDQMMRRLARWSPIQIPTTRN 519
+ L+ + +++D S L S Q + R ++ RN
Sbjct: 308 EFNTLYHWHPLLPDTFNIEDQEYSFKQFLYNNSILLEHGLTQFVESFTRQIAGRVAGGRN 367
Query: 520 V 520
V
Sbjct: 368 V 368
Score = 48.0 bits (114), Expect = 1e-05
Identities = 8/36 (22%), Positives = 20/36 (55%)
Query: 248 NPDWSEGVLSEEARSIVIAQIQHVTYDEYLPVLIGE 283
+P+W + L + ++ I+I + + ++Y+ L G
Sbjct: 248 HPEWGDEQLFQTSKLILIGETIKIVIEDYVQHLSGY 283
Score = 48.0 bits (114), Expect = 1e-05
Identities = 8/36 (22%), Positives = 20/36 (55%)
Query: 286 NPDWSEGVLSEEARSIVIAQIQHVTYDEYLPVLIGE 321
+P+W + L + ++ I+I + + ++Y+ L G
Sbjct: 248 HPEWGDEQLFQTSKLILIGETIKIVIEDYVQHLSGY 283
Score = 48.0 bits (114), Expect = 1e-05
Identities = 8/36 (22%), Positives = 20/36 (55%)
Query: 324 NPDWSEGVLSEEARSIVIAQIQHVTYDEYLPVLIGE 359
+P+W + L + ++ I+I + + ++Y+ L G
Sbjct: 248 HPEWGDEQLFQTSKLILIGETIKIVIEDYVQHLSGY 283
Score = 48.0 bits (114), Expect = 1e-05
Identities = 8/36 (22%), Positives = 20/36 (55%)
Query: 362 NPDWSEGVLSEEARSIVIAQIQHVTYDEYLPVLIGE 397
+P+W + L + ++ I+I + + ++Y+ L G
Sbjct: 248 HPEWGDEQLFQTSKLILIGETIKIVIEDYVQHLSGY 283
Score = 31.1 bits (70), Expect = 1.5
Identities = 4/34 (11%), Positives = 6/34 (17%)
Query: 1201 GYYKGYNDNCKPNIMTEFATAAYRIGHSLLRPFI 1234
+N + H LL
Sbjct: 290 DPELLFNQQFQYQNRIASEFNTLYHWHPLLPDTF 323
>d1q4ga1 a.93.1.2 (A:74-584) Prostaglandin H2 synthase {Sheep (Ovis
aries) [TaxId: 9940]}
Length = 511
Score = 241 bits (617), Expect = 2e-69
Identities = 70/388 (18%), Positives = 109/388 (28%), Gaps = 71/388 (18%)
Query: 725 PREQINQNSAYLDGSLIYGEHACQAKDLRSY-DGKLNVTLMPGRKDLLPNTPTHPECR-- 781
+D IYG++ + LR + DGKL ++ G
Sbjct: 144 GPGFTKALGHGVDLGHIYGDNLERQYQLRLFKDGKLKYQMLNGEVYPPSVEEAPVLMHYP 203
Query: 782 ----SRYCFVAGDGRASEQPGLTAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 837
+ G PGL TI +REHNR+ + L +P W DEQLFQ AR I+
Sbjct: 204 RGIPPQSQMAVGQEVFGLLPGLMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLIL 263
Query: 838 VGQWQHIVYNEFLPRLLGLNAVNLYGLKLSPTGYYKGYNDNCKPNIMTEFATAAYRIGHS 897
+G+ IV E++ +L G + +L G Y + H
Sbjct: 264 IGETIKIVIEEYVQQLSGYFLQLKFDPELLF-GAQFQYRNRI------AMEFNQLYHWHP 316
Query: 898 LLRPFIPRLVIARFRRIYASPDDVDLFPGGLSERPVAARLRRIYASPDDVDLFPGGLSEQ 957
L+ + + E V A R+ +
Sbjct: 317 LMPDSFRVGPQDYSYEQFLFNT--SMLVDYGVEALVDAFSRQPAGRIGGGRNIDHHILHV 374
Query: 958 PVAVIVRFR----------RIYASPDDVDLFPGGLSERPVAARLRRIYASPDDVDLFPGG 1007
V VI R R F E+ +AA L +Y D ++ +PG
Sbjct: 375 AVDVIKESRVLRLQPFNEYRKRFGMKPYTSFQELTGEKEMAAELEELYGDIDALEFYPGL 434
Query: 1008 LSERPVAVGTLSFKLHCLKGYRTFEKKSCEKTHTNIDNVDLLIGGLLENSEPGSALGITF 1067
L E+ P S G +
Sbjct: 435 LLEKCH---------------------------------------------PNSIFGESM 449
Query: 1068 SCLLARQFSVLKDSDRFWYENDFPPTSF 1095
+ A + + ++F
Sbjct: 450 IEMGAPFSLKGLLGNPICSPEYWKASTF 477
Score = 195 bits (497), Expect = 1e-53
Identities = 32/217 (14%), Positives = 70/217 (32%), Gaps = 28/217 (12%)
Query: 1645 YYTYHTLIEGTVTAEVLSDGHVLLRDHFFNPDLIYKPNMIDEMMRGLAGTPMENLDQFVT 1704
Y +H L+ + + FN ++ ++ ++ + P +
Sbjct: 311 LYHWHPLMPDSFR---VGPQDYSYEQFLFNTSMLVDYG-VEALVDAFSRQPAGRIGGGRN 366
Query: 1705 GEITNHLFEEKGRPHSGVDLPALNIQRARDHGVPSYNEYRALCNLKKAKTWADLSREIPD 1764
H + + I+ +R + +NEYR +K ++ +L+ E
Sbjct: 367 ------------IDHHILHVAVDVIKESRVLRLQPFNEYRKRFGMKPYTSFQELTGEK-- 412
Query: 1765 EVIARFRRIYASPDDVDLFPGGLSERPVAGGMVGPTFACIIGLQFRQLRKCDRFWYET-D 1823
E+ A +Y D ++ +PG L E+ + G + + + +
Sbjct: 413 EMAAELEELYGDIDALEFYPGLLLEKCHPNSIFGESMIEMGAPFSLKGLLGNPICSPEYW 472
Query: 1824 DPVIRFTEPQLQEIRKATLAKEIKKATLAKVICANMD 1860
E ++ ATL K++C N
Sbjct: 473 KASTFGGEVGFNLVK---------TATLKKLVCLNTK 500
Score = 116 bits (292), Expect = 2e-27
Identities = 22/137 (16%), Positives = 49/137 (35%), Gaps = 15/137 (10%)
Query: 1309 PNHELLSDGHVLLRDHFFNPDLIYKPNMIDEMMRGLAGTPMENLDQFVTGEITNHLFEEK 1368
P+ + FN ++ ++ ++ + P +
Sbjct: 319 PDSFRVGPQDYSYEQFLFNTSMLVDYG-VEALVDAFSRQPAGRIGGGRN----------- 366
Query: 1369 GRPHSGVDLPALNIQRARDHGVPSYNEYRALCNLKKAKTWADLSREIPDEVIARFRRIYA 1428
H + + I+ +R + +NEYR +K ++ +L+ E E+ A +Y
Sbjct: 367 -IDHHILHVAVDVIKESRVLRLQPFNEYRKRFGMKPYTSFQELTGEK--EMAAELEELYG 423
Query: 1429 SPDDVDLFPGGLSERPV 1445
D ++ +PG L E+
Sbjct: 424 DIDALEFYPGLLLEKCH 440
Score = 100 bits (250), Expect = 4e-22
Identities = 18/89 (20%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Query: 1864 EITNHLFEEKGRPHSGVDLPALNIQRARDHGVPSYNEYRALCNLKKAKTWADLSREIPDE 1923
+ + + H + + I+ +R + +NEYR +K ++ +L+ E E
Sbjct: 356 QPAGRIGGGRNIDHHILHVAVDVIKESRVLRLQPFNEYRKRFGMKPYTSFQELTGEK--E 413
Query: 1924 VIARFRRIYASPDDVDLFPGGLSERPVAD 1952
+ A +Y D ++ +PG L E+ +
Sbjct: 414 MAAELEELYGDIDALEFYPGLLLEKCHPN 442
Score = 93.1 bits (231), Expect = 7e-20
Identities = 28/196 (14%), Positives = 56/196 (28%), Gaps = 43/196 (21%)
Query: 67 PSGKEIS---HKIKTSPQPHEYLSNFVGLWSQLIRDDLTSANTTTAKKVVNQATGFLDGS 123
P + +S + + + ++Q + +D
Sbjct: 99 PDAEFLSRRFLLRRKFIPDPQGTNLMFAFFAQHFTHQFFKTSGKMGPGFTKALGHGVDLG 158
Query: 124 KIYGSD----------------------------------------SILSRTQYGAYLQC 143
IYG + I ++Q +
Sbjct: 159 HIYGDNLERQYQLRLFKDGKLKYQMLNGEVYPPSVEEAPVLMHYPRGIPPQSQMAVGQEV 218
Query: 144 VSCNSPSNLMYKLFELEHNRLVTELAEVNPDWSEDVLFEEARSIVIAQIQHVTYDEYLPV 203
L ++ EHNR+ L +P W ++ LF+ AR I+I + + +EY+
Sbjct: 219 FGLLPGLMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLILIGETIKIVIEEYVQQ 278
Query: 204 LIGECVNPDWSEGVLS 219
L G + + +L
Sbjct: 279 LSGYFLQLKFDPELLF 294
Score = 73.1 bits (179), Expect = 2e-13
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 4 LFELEHNRLVTELAEVNPDWSEDVLFEEARSIVIAQIQHVTYDEYLPVLIGE 55
++ EHNR+ L +P W ++ LF+ AR I+I + + +EY+ L G
Sbjct: 231 IWLREHNRVCDLLKAEHPTWGDEQLFQTARLILIGETIKIVIEEYVQQLSGY 282
Score = 59.2 bits (143), Expect = 3e-09
Identities = 24/157 (15%), Positives = 52/157 (33%)
Query: 400 NPDWSEGVLSEEARSIVIAQIQHVTYDEYLPVLIGECVNPDWSEGVLSEEARSIVIAQIQ 459
+P W + L + AR I+I + + +EY+ L G + + +L
Sbjct: 247 HPTWGDEQLFQTARLILIGETIKIVIEEYVQQLSGYFLQLKFDPELLFGAQFQYRNRIAM 306
Query: 460 HVTYDEYLPVLIGENVDVDDLLESVNLILQEQSEKPNISPDQMMRRLARWSPIQIPTTRN 519
+ L+ ++ V S L S + + ++ +R +I RN
Sbjct: 307 EFNQLYHWHPLMPDSFRVGPQDYSYEQFLFNTSMLVDYGVEALVDAFSRQPAGRIGGGRN 366
Query: 520 VGELDEQIDRRVTESAGSQIFNFIDDLNKAGFLPPIR 556
+ + V + + ++ K + P
Sbjct: 367 IDHHILHVAVDVIKESRVLRLQPFNEYRKRFGMKPYT 403
Score = 53.4 bits (128), Expect = 2e-07
Identities = 17/74 (22%), Positives = 24/74 (32%), Gaps = 4/74 (5%)
Query: 594 TTFSRLLPSVYEDLISTPRVHSVSGAPLPTARLVSAMVHA--DISHLSNRYSLMVMQLAQ 651
+ ++R+LPSV D + LP A +S +LM AQ
Sbjct: 73 SYYTRILPSVPRDCPTPMGT--KGKKQLPDAEFLSRRFLLRRKFIPDPQGTNLMFAFFAQ 130
Query: 652 TIDHDLTFTPVYRG 665
H T G
Sbjct: 131 HFTHQFFKTSGKMG 144
Score = 53.4 bits (128), Expect = 2e-07
Identities = 17/74 (22%), Positives = 24/74 (32%), Gaps = 4/74 (5%)
Query: 1512 TTFSRLLPSVYEDLISTPRVHSVSGAPLPTARLVSAMVHA--DISHLSNRYSLMVMQLAQ 1569
+ ++R+LPSV D + LP A +S +LM AQ
Sbjct: 73 SYYTRILPSVPRDCPTPMGT--KGKKQLPDAEFLSRRFLLRRKFIPDPQGTNLMFAFFAQ 130
Query: 1570 TIDHDLTFTPVYRG 1583
H T G
Sbjct: 131 HFTHQFFKTSGKMG 144
Score = 51.1 bits (122), Expect = 1e-06
Identities = 12/48 (25%), Positives = 23/48 (47%)
Query: 248 NPDWSEGVLSEEARSIVIAQIQHVTYDEYLPVLIGECVNPDWSEGVLS 295
+P W + L + AR I+I + + +EY+ L G + + +L
Sbjct: 247 HPTWGDEQLFQTARLILIGETIKIVIEEYVQQLSGYFLQLKFDPELLF 294
Score = 51.1 bits (122), Expect = 1e-06
Identities = 12/48 (25%), Positives = 23/48 (47%)
Query: 286 NPDWSEGVLSEEARSIVIAQIQHVTYDEYLPVLIGECVNPDWSEGVLS 333
+P W + L + AR I+I + + +EY+ L G + + +L
Sbjct: 247 HPTWGDEQLFQTARLILIGETIKIVIEEYVQQLSGYFLQLKFDPELLF 294
Score = 51.1 bits (122), Expect = 1e-06
Identities = 12/48 (25%), Positives = 23/48 (47%)
Query: 324 NPDWSEGVLSEEARSIVIAQIQHVTYDEYLPVLIGECVNPDWSEGVLS 371
+P W + L + AR I+I + + +EY+ L G + + +L
Sbjct: 247 HPTWGDEQLFQTARLILIGETIKIVIEEYVQQLSGYFLQLKFDPELLF 294
Score = 51.1 bits (122), Expect = 1e-06
Identities = 12/48 (25%), Positives = 23/48 (47%)
Query: 362 NPDWSEGVLSEEARSIVIAQIQHVTYDEYLPVLIGECVNPDWSEGVLS 409
+P W + L + AR I+I + + +EY+ L G + + +L
Sbjct: 247 HPTWGDEQLFQTARLILIGETIKIVIEEYVQQLSGYFLQLKFDPELLF 294
>d1u5ma_ g.27.1.2 (A:) Collagen alpha 1(II) chain precursor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 73
Score = 32.6 bits (74), Expect = 0.053
Identities = 8/26 (30%), Positives = 11/26 (42%)
Query: 1279 GGCNIGGVQVSVGQSHLPSPCTSCIC 1304
G C G + + P PC C+C
Sbjct: 8 GSCVQDGQRYNDKDVWKPEPCRICVC 33
>d1yt8a1 c.46.1.2 (A:107-242) Thiosulfate sulfurtransferase PA2603
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 136
Score = 28.3 bits (62), Expect = 5.3
Identities = 9/57 (15%), Positives = 19/57 (33%), Gaps = 4/57 (7%)
Query: 469 VLIGENVDVDDLLESVNLILQEQSEKPNISPDQMMRRLARWSPIQIPTTRNVGELDE 525
+ NV E V + + P+++ +++ L + I R E
Sbjct: 2 LFRDVNVPSKAFGELV----EAERHTPSLAAEEVQALLDARAEAVILDARRFDEYQT 54
>d1nd7a_ d.148.1.1 (A:) WW domain-containing protein 1, WWP1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 374
Score = 29.3 bits (65), Expect = 5.6
Identities = 14/75 (18%), Positives = 29/75 (38%), Gaps = 1/75 (1%)
Query: 1931 IYASPDDVDLFPGGLSERPVADDNLARYLRARLQLNDTYGRKKIYHGLARPFYKIKEPKN 1990
I DL GG S V ++N Y+ + + G ++ F ++ +
Sbjct: 187 ILGKVTSHDLKLGG-SNILVTEENKDEYIGLMTEWRFSRGVQEQTKAFLDGFNEVVPLQW 245
Query: 1991 VSWGDSEMLDDLCEG 2005
+ + D + L+ + G
Sbjct: 246 LQYFDEKELEVMLCG 260
>d2pyta1 b.82.1.24 (A:100-227) Ethanolamine utilization protein EutQ
{Salmonella typhimurium [TaxId: 90371]}
Length = 128
Score = 27.6 bits (61), Expect = 8.9
Identities = 11/83 (13%), Positives = 24/83 (28%), Gaps = 5/83 (6%)
Query: 1599 TVHPECMPIPIPAGDPYFPQYNRTTGRPLCLPFMRSLSGKKTGEPSYYTYHTLIEGTVTA 1658
+V P G + FM+ + +Y ++EG +
Sbjct: 26 SVKFGRFDGAEPHCVGLTDLVTEQDGSSMAAGFMQWDNAFFPWTLNYDEIDMVLEGELHV 85
Query: 1659 EVLSDGHVLLRDHFFNPDLIYKP 1681
+G + D+++ P
Sbjct: 86 RH--EGETM---IAKAGDVMFIP 103
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.138 0.423
Gapped
Lambda K H
0.267 0.0517 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 8,178,844
Number of extensions: 418655
Number of successful extensions: 1072
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1016
Number of HSP's successfully gapped: 56
Length of query: 2042
Length of database: 2,407,596
Length adjustment: 99
Effective length of query: 1943
Effective length of database: 1,048,326
Effective search space: 2036897418
Effective search space used: 2036897418
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.4 bits)