RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy12201
(116 letters)
>d1n28a_ a.133.1.2 (A:) Phospholipase A2 {Human (Homo sapiens),
synovial fluid [TaxId: 9606]}
Length = 124
Score = 85.0 bits (210), Expect = 3e-23
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 1 MVSCSTGCDP-LSYKGYGCYCGFLGSGYPVDPIDRCCELHDWCYTGSNCPLFLEYFIPYV 59
M+ +TG + LSY YGC+CG G G P D DRCC D CY F+ Y
Sbjct: 8 MIKLTTGKEAALSYGFYGCHCGVGGRGSPKDATDRCCVTQDCCYKRLEKRGCGTKFLSYK 67
Query: 60 WTCFRGRPLCQRGKSCSHRLCECDRRFSECLR 91
++ R C + SC +LCECD+ + C
Sbjct: 68 FSNSGSRITCAKQDSCRSQLCECDKAAATCFA 99
>d2g58a1 a.133.1.2 (A:1-133) Snake phospholipase A2 {Snake (Daboia
russellii pulchella), different isoforms [TaxId:
97228]}
Length = 121
Score = 81.5 bits (201), Expect = 5e-22
Identities = 38/92 (41%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 1 MVSCSTGCDPL-SYKGYGCYCGFLGSGYPVDPIDRCCELHDWCYTGSNCPLFLEYFIPYV 59
M+ TG + SY YGCYCG+ G G P D DRCC +HD CY N P Y
Sbjct: 8 MILEETGKLAIPSYSSYGCYCGWGGKGTPKDATDRCCFVHDCCY--GNLPDCNPKSDRYK 65
Query: 60 WTCFRGRPLCQRGKSCSHRLCECDRRFSECLR 91
+ G +C++G SC +R+CECD+ + C R
Sbjct: 66 YKRVNGAIVCEKGTSCENRICECDKAAAICFR 97
>d1le6a_ a.133.1.2 (A:) Phospholipase A2 {Human (Homo sapiens),
SPLA2 [TaxId: 9606]}
Length = 123
Score = 81.5 bits (201), Expect = 6e-22
Identities = 34/95 (35%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
Query: 1 MVSCSTGCDPLSYKGYGCYCGFLGSGYPVDPIDRCCELHDWCYTGSNCPLFLEYFIPYVW 60
V C P++Y YGC+CG G G P D ID CC HD CYT + Y W
Sbjct: 8 TVGCVGPRTPIAYMKYGCFCGLGGHGQPRDAIDWCCHGHDCCYTRAEEAGCSPKTERYSW 67
Query: 61 TCFRGRPLCQRGKS-CSHRLCECDRRFSECLRPYS 94
C LC ++ C LC+CD+ + CL
Sbjct: 68 QCVNQSVLCGPAENKCQELLCKCDQEIANCLAQTE 102
>d1g0za_ a.133.1.2 (A:) Snake phospholipase A2 {Indian krait
(Bungarus caeruleus), different isoforms [TaxId:
132961]}
Length = 118
Score = 79.2 bits (195), Expect = 5e-21
Identities = 38/93 (40%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 1 MVSCSTGCDPLSYKGYGCYCGFLGSGYPVDPIDRCCELHDWCYTG-SNCPLFLEYFIPYV 59
M+ C+ SY GYGCYCG+ GSG PVD +DRCC HD CY +N P Y
Sbjct: 8 MIQCAGTRTWTSYIGYGCYCGYGGSGTPVDELDRCCYTHDHCYNKAANIPGCNPLIKTYS 67
Query: 60 WTCFRGRPLCQRGK-SCSHRLCECDRRFSECLR 91
+TC + C SC+ +C+CDR + C
Sbjct: 68 YTCTKPNITCNDTSDSCARFICDCDRTAAICFA 100
>d1sz8a_ a.133.1.2 (A:) Snake phospholipase A2 {Andaman cobra (Naja
sagittifera), acidic isoform 1 [TaxId: 195058]}
Length = 119
Score = 78.8 bits (194), Expect = 6e-21
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 1 MVSCSTGCDP-LSYKGYGCYCGFLGSGYPVDPIDRCCELHDWCYTG-SNCPLFLEYFIPY 58
M+ C+ + YGCYCG GSG PVD +DRCC++HD CY N YF Y
Sbjct: 8 MIQCTVPSRSWQDFADYGCYCGKGGSGTPVDDLDRCCQVHDNCYNEAENISGCRPYFKTY 67
Query: 59 VWTCFRGRPLCQ-RGKSCSHRLCECDRRFSECLR 91
+ C +G C+ +C+ +C+CDR + C
Sbjct: 68 SYECTQGTLTCKGDNNACAASVCDCDRLAAICFA 101
>d1jlta_ a.133.1.2 (A:) Snake phospholipase A2 {Sand viper (Vipera
ammodytes meridionalis), vipoxin inhibitor [TaxId:
8704]}
Length = 122
Score = 77.7 bits (191), Expect = 2e-20
Identities = 32/92 (34%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Query: 1 MVSCSTGCDP-LSYKGYGCYCGFLGSGYPVDPIDRCCELHDWCYTGSNCPLFLEYFIPYV 59
M+ TG + SY YGCYCG+ G D DRCC D CY N Y
Sbjct: 8 MILQKTGKEAVHSYAIYGCYCGWGGQARAQDATDRCCFAQDCCYGRVND--CNPKTATYT 65
Query: 60 WTCFRGRPLCQRGKSCSHRLCECDRRFSECLR 91
++ G +C C +CECDR + CL
Sbjct: 66 YSFENGDIVCGDNDLCLRAVCECDRAAAICLG 97
>d1ae7a_ a.133.1.2 (A:) Snake phospholipase A2 {Mainland tiger snake
(Notechis scutatus scutatus), notexin [TaxId: 8663]}
Length = 119
Score = 76.9 bits (189), Expect = 3e-20
Identities = 32/94 (34%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Query: 1 MVSCSTGCD--PLSYKGYGCYCGFLGSGYPVDPIDRCCELHDWCYTGSNCPLFLEYFIPY 58
++ C+ Y YGCYCG GSG PVD +DRCC++HD CY + Y
Sbjct: 8 LIQCANHGKRPTWHYMDYGCYCGAGGSGTPVDELDRCCKIHDDCYDEAGKKGCFPKMSAY 67
Query: 59 VWTCFRGRPLCQRGKS-CSHRLCECDRRFSECLR 91
+ C P C+ K C +C+CD + C
Sbjct: 68 DYYCGENGPYCRNIKKKCLRFVCDCDVEAAFCFA 101
>d1jiaa_ a.133.1.2 (A:) Snake phospholipase A2 {Snake (Agkistrodon
halys) [TaxId: 8714]}
Length = 122
Score = 76.9 bits (189), Expect = 3e-20
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 1 MVSCSTGCDP-LSYKGYGCYCGFLGSGYPVDPIDRCCELHDWCYTGSNCPLFLEYFIPYV 59
M+ TG +P +SY YGCYCG G G P D DRCC +HD CY + Y
Sbjct: 8 MIKKMTGKEPVVSYAFYGCYCGSGGRGKPKDATDRCCFVHDCCYEKVTGC--DPKWDDYT 65
Query: 60 WTCFRGRPLCQRGKSCSHRLCECDRRFSECLR 91
++ G +C C +CECD+ + C R
Sbjct: 66 YSWKNGTIVCGGDDPCKKEVCECDKAAAICFR 97
>d1vipa_ a.133.1.2 (A:) Snake phospholipase A2 {Russell's viper
(Vipera russelli) [TaxId: 8707]}
Length = 121
Score = 76.9 bits (189), Expect = 4e-20
Identities = 37/92 (40%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 1 MVSCSTGCDPL-SYKGYGCYCGFLGSGYPVDPIDRCCELHDWCYTGSNCPLFLEYFIPYV 59
M+ TG +PL SY YGCYCG+ G G P D DRCC +HD CY Y
Sbjct: 8 MIVKMTGKNPLSSYSDYGCYCGWGGKGKPQDATDRCCFVHDCCYEKVKSCKP--KLSLYS 65
Query: 60 WTCFRGRPLCQRGKSCSHRLCECDRRFSECLR 91
++ G +C SC +CECDR + C R
Sbjct: 66 YSFQNGGIVCGDNHSCKRAVCECDRVAATCFR 97
>d1gmza_ a.133.1.2 (A:) Snake phospholipase A2 {Snake (Bothrops
pirajai), piratoxin III [TaxId: 113192]}
Length = 122
Score = 76.9 bits (189), Expect = 4e-20
Identities = 33/92 (35%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Query: 1 MVSCSTGCDPL-SYKGYGCYCGFLGSGYPVDPIDRCCELHDWCYTGSNCPLFLEYFIPYV 59
M+ TG P Y YGCYCG G G P D DRCC +HD CY Y
Sbjct: 8 MILKETGKLPFPYYVTYGCYCGVGGRGGPKDATDRCCFVHDCCYGKLTS--CKPKTDRYS 65
Query: 60 WTCFRGRPLCQRGKSCSHRLCECDRRFSECLR 91
++ G +C C +CECD+ + C R
Sbjct: 66 YSRKDGTIVCGENDPCRKEICECDKAAAVCFR 97
>d1mc2a_ a.133.1.2 (A:) Snake phospholipase A2 {Hundred-pace snake
(Agkistrodon acutus) [TaxId: 36307]}
Length = 122
Score = 75.8 bits (186), Expect = 1e-19
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 1 MVSCSTGCDPL-SYKGYGCYCGFLGSGYPVDPIDRCCELHDWCYTGSNCPLFLEYFIPYV 59
M+ TG +P+ +Y YGC CG G G P+D DRCC +H CY Y
Sbjct: 8 MIWQETGKNPVKNYGLYGCNCGVGGRGEPLDATDRCCFVHKCCYKKLTDCDS--KKDRYS 65
Query: 60 WTCFRGRPLCQRGKSCSHRLCECDRRFSECLR 91
+ +C + + C +CECD+ F+ CLR
Sbjct: 66 YKWKNKAIVCGKNQPCMQEMCECDKAFAICLR 97
>d1ppaa_ a.133.1.2 (A:) Snake phospholipase A2 {Eastern
cottonmouth snake (Agkistrodon piscivorus piscivorus)
[TaxId: 8716]}
Length = 121
Score = 75.4 bits (185), Expect = 1e-19
Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Query: 1 MVSCSTGCDPL-SYKGYGCYCGFLGSGYPVDPIDRCCELHDWCYTGSNCPLFLEYFIPYV 59
M+ TG + + SY YGC CG+ G P D DRCC +H CY Y
Sbjct: 8 MILQETGKNAITSYGSYGCNCGWGHRGQPKDATDRCCFVHKCCYKKLTDCNH--KTDRYS 65
Query: 60 WTCFRGRPLCQRGKSCSHRLCECDRRFSECLR 91
++ +C+ C +CECD+ + CLR
Sbjct: 66 YSWKNKAIICEEKNPCLKEMCECDKAVAICLR 97
>d1bjja_ a.133.1.2 (A:) Snake phospholipase A2 {Snake (Agkistrodon
halys) [TaxId: 8714]}
Length = 122
Score = 75.4 bits (185), Expect = 2e-19
Identities = 35/92 (38%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 1 MVSCSTGCDPL-SYKGYGCYCGFLGSGYPVDPIDRCCELHDWCYTGSNCPLFLEYFIPYV 59
M+ TG + + Y YGCYCG+ G G P D DRCC +HD CY Y
Sbjct: 8 MIKEETGKNAIPFYAFYGCYCGWGGQGKPKDGTDRCCFVHDCCYGRLVN--CNTKSDIYS 65
Query: 60 WTCFRGRPLCQRGKSCSHRLCECDRRFSECLR 91
++ G C +G +C ++CECDR +EC R
Sbjct: 66 YSLKEGYITCGKGTNCEEQICECDRVAAECFR 97
>d1jltb_ a.133.1.2 (B:) Snake phospholipase A2 {Sand viper (Vipera
ammodytes meridionalis), vipoxin catalytic subunit
[TaxId: 8704]}
Length = 122
Score = 75.0 bits (184), Expect = 2e-19
Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Query: 1 MVSCSTGCDP-LSYKGYGCYCGFLGSGYPVDPIDRCCELHDWCYTGSNCPLFLEYFIPYV 59
M++ G +Y YGCYCG+ G G P D DRCC +HD CY Y
Sbjct: 8 MINGKLGAFSVWNYISYGCYCGWGGQGTPKDATDRCCFVHDCCYGRVRGC--NPKLAIYS 65
Query: 60 WTCFRGRPLCQRGKSCSHRLCECDRRFSECLRPYSCP 96
++ +G +C + C +CECDR + C
Sbjct: 66 YSFKKGNIVCGKNNGCLRDICECDRVAANCFHQNKNT 102
>d1m8ta_ a.133.1.2 (A:) Snake phospholipase A2 {King cobra
(Ophiophagus hannah), an acidic isoform [TaxId: 8665]}
Length = 119
Score = 74.5 bits (183), Expect = 3e-19
Identities = 35/98 (35%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 1 MVSCSTG--CDPLSYKGYGCYCGFLGSGYPVDPIDRCCELHDWCYTG-SNCPLFLEYFIP 57
M+ C+ Y YGCYCG GSG PVD +DRCC++HD CYT Y
Sbjct: 8 MIRCTIPGSIPWWDYSDYGCYCGSGGSGTPVDELDRCCQVHDNCYTQAQQLTECSPYSKR 67
Query: 58 YVWTCFRGRPLCQ-RGKSCSHRLCECDRRFSECLRPYS 94
Y + C G C+ C+ +C+CDR + C
Sbjct: 68 YSYDCSEGTLTCKADNDECAAFVCDCDRVAAICFAGAP 105
>d1m8ra_ a.133.1.2 (A:) Snake phospholipase A2 {Snake (Agkistrodon
halys) [TaxId: 8714]}
Length = 124
Score = 74.6 bits (183), Expect = 3e-19
Identities = 31/95 (32%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query: 1 MVSCSTGCDPL-SYKGYGCYCGFLGSGYPVDPIDRCCELHDWCYTG-SNCPLFLEYFIPY 58
++ + Y YGCYCG+ G G P D DRCC +HD CY + C Y
Sbjct: 8 LIMKVAKKSGMQWYSNYGCYCGWGGQGRPQDATDRCCFVHDCCYGKVTGCDP---KMDVY 64
Query: 59 VWTCFRGRPLCQRGKSCSHRLCECDRRFSECLRPY 93
++ G +C C +CECDR + C R
Sbjct: 65 SFSEENGDIVCGGDDPCKKEICECDRAAAICFRDN 99
>d1zlba1 a.133.1.2 (A:1-122) Snake phospholipase A2 {Jararacussu
(Bothrops jararacussu) [TaxId: 8726]}
Length = 122
Score = 74.6 bits (183), Expect = 3e-19
Identities = 34/93 (36%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 1 MVSCSTGCDP-LSYKGYGCYCGFLGSGYPVDPIDRCCELHDWCYTG-SNCPLFLEYFIPY 58
M++ G L Y YGCYCG G G P D DRCC +HD CY + C Y
Sbjct: 8 MINYVMGESGVLQYLSYGCYCGLGGQGQPTDATDRCCFVHDCCYGKVTGCN---PKIDSY 64
Query: 59 VWTCFRGRPLCQRGKSCSHRLCECDRRFSECLR 91
++ G +C C ++CECDR + C R
Sbjct: 65 TYSKKNGDVVCGGDNPCKKQICECDRVATTCFR 97
>d1oz6a_ a.133.1.2 (A:) Snake phospholipase A2 {Saw-scaled viper
(Echis carinatus) [TaxId: 40353]}
Length = 120
Score = 73.1 bits (179), Expect = 1e-18
Identities = 37/92 (40%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 1 MVSCSTGCDP-LSYKGYGCYCGFLGSGYPVDPIDRCCELHDWCYTGSNCPLFLEYFIPYV 59
M+ TG P LSY YGCYCG+ G G P D DRCC +HD CYT Y
Sbjct: 8 MIWNRTGKLPILSYGSYGCYCGWGGQGPPKDATDRCCLVHDCCYTRVGD--CSPKMTLYS 65
Query: 60 WTCFRGRPLCQRGKSCSHRLCECDRRFSECLR 91
+ G +C C +CECDR + CL
Sbjct: 66 YRFENGDIICDNKDPCKRAVCECDREAAICLG 97
>d1p7oa_ a.133.1.2 (A:) Snake phospholipase A2 {Small-eye snake
(Micropechis ikaheka), different isoforms [TaxId:
66188]}
Length = 124
Score = 73.1 bits (179), Expect = 1e-18
Identities = 38/103 (36%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Query: 1 MVSCS-TGCDP-LSYKGYGCYCGFLGSGYPVDPIDRCCELHDWCYT------GSNCPLFL 52
M+ C+ G +P L++ YGCYCG GSG PVD +DRCC+ HD CY L
Sbjct: 8 MIKCTIPGREPLLAFSNYGCYCGKGGSGTPVDELDRCCQTHDNCYDKAEKLPECKGILSG 67
Query: 53 EYFIPYVWTCFRGRPLCQ-RGKSCSHRLCECDRRFSECLRPYS 94
YF Y + C G+ C + C +C CDR + C
Sbjct: 68 PYFNTYSYDCTDGKLTCNDQNDKCKLFICNCDRTAAMCFAKAP 110
>d1g4ia_ a.133.1.2 (A:) Phospholipase A2 {Cow (Bos taurus), pancreas
[TaxId: 9913]}
Length = 123
Score = 71.9 bits (176), Expect = 3e-18
Identities = 33/103 (32%), Positives = 43/103 (41%), Gaps = 9/103 (8%)
Query: 1 MVSCSTGCDP--LSYKGYGCYCGFLGSGYPVDPIDRCCELHDWCYT------GSNCPLFL 52
M+ C L + YGCYCG GSG PVD +DRCC+ HD CY +
Sbjct: 8 MIKCKIPSSEPLLDFNNYGCYCGLGGSGTPVDDLDRCCQTHDNCYKQAKKLDSCKVLVDN 67
Query: 53 EYFIPYVWTCFRGRPLCQ-RGKSCSHRLCECDRRFSECLRPYS 94
Y Y ++C C +C +C CDR + C
Sbjct: 68 PYTNNYSYSCSNNEITCSSENNACEAFICNCDRNAAICFSKVP 110
>d1buna_ a.133.1.2 (A:) Snake phospholipase A2 {Many-banded krait
(Bungarus multicinctus), beta2-bungarotoxin [TaxId:
8616]}
Length = 120
Score = 71.5 bits (175), Expect = 5e-18
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 1 MVSCSTGCDP--LSYKGYGCYCGFLGSGYPVDPIDRCCELHDWCYTGSNCPLFLE-YFIP 57
M+ + C+ Y YGCYCG GSG P+D +DRCC +HD CY +
Sbjct: 8 MIRYTIPCEKTWGEYADYGCYCGAGGSGRPIDALDRCCYVHDNCYGDAEKKHKCNPKTQS 67
Query: 58 YVWTCFRGRPLCQRGKS-CSHRLCECDRRFSECLR 91
Y + + +C C+ +C+CDR + C
Sbjct: 68 YSYKLTKRTIICYGAAGTCARIVCDCDRTAALCFG 102
>d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine
aminotransferase ArgD {Thermus thermophilus [TaxId:
274]}
Length = 387
Score = 25.5 bits (55), Expect = 1.6
Identities = 10/73 (13%), Positives = 16/73 (21%), Gaps = 9/73 (12%)
Query: 18 CYCGFLGSGYPVDPIDRCCELHDWCYTGSN---------CPLFLEYFIPYVWTCFRGRPL 68
LG G P+ E+ G + I Y+
Sbjct: 243 TLAKALGGGVPLGVAVMREEVARSMPKGGHGTTFGGNPLAMAAGVAAIRYLERTRLWERA 302
Query: 69 CQRGKSCSHRLCE 81
+ G +L
Sbjct: 303 AELGPWFMEKLRA 315
>d1eb6a_ d.92.1.12 (A:) Fungal zinc peptidase {Aspergillus oryzae,
deuterolysin [TaxId: 5062]}
Length = 177
Score = 25.3 bits (55), Expect = 1.9
Identities = 10/66 (15%), Positives = 15/66 (22%), Gaps = 15/66 (22%)
Query: 6 TGCDPLSYKGYGCYCGFLGSGYPVDPIDRCCELHDWCYTGS------NCPLFLEYFIPYV 59
S +C + CE + YT NC ++ P
Sbjct: 64 KEAGSTSGGSTTYHC---------NDPYGYCEPNVLAYTLPSKNEIANCDIYYSELPPLA 114
Query: 60 WTCFRG 65
C
Sbjct: 115 QKCHAQ 120
>d1poca_ a.133.1.1 (A:) Phospholipase A2 {European honeybee (Apis
mellifera) [TaxId: 7460]}
Length = 134
Score = 22.9 bits (49), Expect = 9.6
Identities = 14/62 (22%), Positives = 20/62 (32%), Gaps = 16/62 (25%)
Query: 32 IDRCCELHDWCYTGSNCPLFLEYFIP-YVWTCFRGRPLCQRGKSCSHRLCECDRRFSECL 90
D CC HD CP + + T C+CD +F +CL
Sbjct: 27 TDACCRTHD------MCPDVMSAGESKHGLTNTASHTRLS---------CDCDDKFYDCL 71
Query: 91 RP 92
+
Sbjct: 72 KN 73
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.332 0.148 0.559
Gapped
Lambda K H
0.267 0.0549 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 514,790
Number of extensions: 25843
Number of successful extensions: 163
Number of sequences better than 10.0: 1
Number of HSP's gapped: 129
Number of HSP's successfully gapped: 56
Length of query: 116
Length of database: 2,407,596
Length adjustment: 73
Effective length of query: 43
Effective length of database: 1,405,306
Effective search space: 60428158
Effective search space used: 60428158
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 47 (22.3 bits)