BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12202
(157 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3ELO|A Chain A, Crystal Structure Of Human Pancreatic Prophospholipase A2
Length = 133
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 57/140 (40%), Gaps = 36/140 (25%)
Query: 5 RSAVQLYSMVSCST-GCDP-LSYKGYGCYCGFLGSGYPVDPIDRTSQL-----NMARDHD 57
R+ Q M+ C G DP L Y YGCYCG GSG PVD +D+ Q + A+ D
Sbjct: 7 RAVWQFRKMIKCVIPGSDPFLEYNNYGCYCGLGGSGTPVDELDKCCQTHDNCYDQAKKLD 66
Query: 58 SGHEIYIIFIYSGVVSYTTGAIQGPTVLSFSNISSPTCGPASEDGPYVVSKASKRGKSCS 117
S + + Y+ SY+ S+ TC S + K C
Sbjct: 67 SC-KFLLDNPYTHTYSYSCSG------------SAITC--------------SSKNKECE 99
Query: 118 HRLCECDRRFSECLR--PYS 135
+C CDR + C PY+
Sbjct: 100 AFICNCDRNAAICFSKAPYN 119
>pdb|3V9M|A Chain A, Phospholipase Acii4 From Australian King Brown Snake
pdb|3V9M|B Chain B, Phospholipase Acii4 From Australian King Brown Snake
Length = 118
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 7/56 (12%)
Query: 8 VQLYSMVSCST-GCDP-LSYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHE 61
+Q +M+ C+ G P L Y YGCYCG+ GSG PVD +DR Q+ HD+ +E
Sbjct: 3 IQFGNMIQCANKGSRPSLDYADYGCYCGWGGSGTPVDELDRCCQV-----HDNCYE 53
>pdb|1HN4|A Chain A, Prophospholipase A2 Dimer Complexed With Mj33, Sulfate,
And Calcium
pdb|1HN4|B Chain B, Prophospholipase A2 Dimer Complexed With Mj33, Sulfate,
And Calcium
Length = 131
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 2 LRKRSAVQLYSMVSCST-GCDPL-SYKGYGCYCGFLGSGYPVDPIDR 46
+ R+ Q SM+ C+ G PL + YGCYCG GSG PVD +DR
Sbjct: 4 ISSRALWQFRSMIKCAIPGSHPLMDFNNYGCYCGLGGSGTPVDELDR 50
>pdb|3G8G|A Chain A, Crystal Structure Of Phospholipase A2 Ammodytoxin A From
Vipera Ammodytes Ammodytes
Length = 122
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 52/131 (39%), Gaps = 38/131 (29%)
Query: 6 SAVQLYSMVSCSTGCDPL-SYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYI 64
S ++ M+ TG +PL SY YGCYCG G G P D DR + HD
Sbjct: 1 SLLEFGMMILGETGKNPLTSYSFYGCYCGVGGKGTPKDATDRCCFV-----HD------- 48
Query: 65 IFIYSGVVSYTTGAIQGPTVLSFSNISSPTCGPASEDGPYVVSKAS---KRGKSCSHRLC 121
+ N+ P C P ++ Y + +G SC +R+C
Sbjct: 49 --------------------CCYGNL--PDCSPKTDRYKYHRENGAIVCGKGTSCENRIC 86
Query: 122 ECDRRFSECLR 132
ECDR + C R
Sbjct: 87 ECDRAAAICFR 97
>pdb|3G8H|A Chain A, Crystal Structure Of Phospholipase A2 Ammodytoxin C From
Vipera Ammodytes Ammodytes
Length = 122
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 52/131 (39%), Gaps = 38/131 (29%)
Query: 6 SAVQLYSMVSCSTGCDPL-SYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYI 64
S ++ M+ TG +PL SY YGCYCG G G P D DR + HD
Sbjct: 1 SLLEFGMMILGETGKNPLTSYSFYGCYCGVGGKGTPKDATDRCCFV-----HD------- 48
Query: 65 IFIYSGVVSYTTGAIQGPTVLSFSNISSPTCGPASEDGPYVVSKAS---KRGKSCSHRLC 121
+ N+ P C P ++ Y + +G SC +R+C
Sbjct: 49 --------------------CCYGNL--PDCSPKTDRYKYHRENGAIVCGKGTSCENRIC 86
Query: 122 ECDRRFSECLR 132
ECDR + C R
Sbjct: 87 ECDRAAAICFR 97
>pdb|2BP2|A Chain A, The Structure Of Bovine Pancreatic Prophospholipase A2
At 3.0 Angstroms Resolution
Length = 130
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 2 LRKRSAVQLYSMVSCST-GCDPL-SYKGYGCYCGFLGSGYPVDPIDRTSQ 49
L R+ Q M+ C +PL + YGCYCG GSG PVD +DR Q
Sbjct: 4 LNSRALWQFNGMIKCKIPSSEPLLDFNNYGCYCGLGGSGTPVDDLDRCCQ 53
>pdb|4BP2|A Chain A, Crystallographic Refinement Of Bovine Pro-Phospholipase
A2 At 1.6 Angstroms Resolution
Length = 130
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 2 LRKRSAVQLYSMVSCST-GCDPL-SYKGYGCYCGFLGSGYPVDPIDRTSQ 49
L R+ Q M+ C +PL + YGCYCG GSG PVD +DR Q
Sbjct: 4 LNSRALWQFNGMIKCKIPSSEPLLDFNNYGCYCGLGGSGTPVDDLDRCCQ 53
>pdb|1P7O|A Chain A, Crystal Structure Of Phospholipase A2 (Mipla4) From
Micropechis Ikaheka
pdb|1P7O|B Chain B, Crystal Structure Of Phospholipase A2 (Mipla4) From
Micropechis Ikaheka
pdb|1P7O|C Chain C, Crystal Structure Of Phospholipase A2 (Mipla4) From
Micropechis Ikaheka
pdb|1P7O|D Chain D, Crystal Structure Of Phospholipase A2 (Mipla4) From
Micropechis Ikaheka
pdb|1P7O|E Chain E, Crystal Structure Of Phospholipase A2 (Mipla4) From
Micropechis Ikaheka
pdb|1P7O|F Chain F, Crystal Structure Of Phospholipase A2 (Mipla4) From
Micropechis Ikaheka
Length = 124
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 26/132 (19%)
Query: 8 VQLYSMVSCST-GCDPL-SYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYII 65
+Q +M+ C+ G +PL ++ YGCYCG GSG PVD +DR Q HD+ ++
Sbjct: 3 LQFRNMIKCTIPGREPLLAFSNYGCYCGKGGSGTPVDELDRCCQT-----HDNCYDK--- 54
Query: 66 FIYSGVVSYTTGAIQGPTVLSFSNISSPTCGPASEDGPYVVSKASKRGKSCSHRLCECDR 125
+ + G + GP ++S + DG + + + C +C CDR
Sbjct: 55 ---AEKLPECKGILSGPYFNTYSYDCT--------DGKLTCNDQNDK---CKLFICNCDR 100
Query: 126 RFSECL--RPYS 135
+ C PY+
Sbjct: 101 TAAMCFAKAPYN 112
>pdb|1TGM|A Chain A, Crystal Structure Of A Complex Formed Between Group Ii
Phospholipase A2 And Aspirin At 1.86 A Resolution
pdb|1TJK|A Chain A, Crystal Structure Of The Complex Formed Between Group Ii
Phospholipase A2 With A Designed Pentapeptide, Phe- Leu-
Ser- Thr- Lys At 1.2 A Resolution
Length = 121
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 45/112 (40%), Gaps = 37/112 (33%)
Query: 24 SYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYIIFIYSGVVSYTTGAIQGPT 83
SY YGCYCG+ GSG P D DR + HD
Sbjct: 20 SYSSYGCYCGWGGSGTPKDATDRCCFV-----HD-------------------------- 48
Query: 84 VLSFSNISSPTCGPASEDGPYVVSKAS---KRGKSCSHRLCECDRRFSECLR 132
+ N+ P C P S+ Y + ++G SC +R+CECD+ + C R
Sbjct: 49 -CCYGNL--PDCNPKSDRYKYKRVNGAIVCEKGTSCENRICECDKAAAICFR 97
>pdb|1PWO|A Chain A, Crystal Structure Of Phospholipase A2 (Mipla2) From
Micropechis Ikaheka
pdb|1PWO|B Chain B, Crystal Structure Of Phospholipase A2 (Mipla2) From
Micropechis Ikaheka
pdb|1PWO|C Chain C, Crystal Structure Of Phospholipase A2 (Mipla2) From
Micropechis Ikaheka
pdb|1PWO|D Chain D, Crystal Structure Of Phospholipase A2 (Mipla2) From
Micropechis Ikaheka
Length = 124
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 24/125 (19%)
Query: 9 QLYSMVSCST-GCDPL-SYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYIIF 66
Q M+ C+ G +PL ++ YGCYCG GSG PVD +DR Q HD+ ++
Sbjct: 4 QFRKMIKCTIPGREPLLAFTDYGCYCGKGGSGTPVDELDRCCQT-----HDNCYD----- 53
Query: 67 IYSGVVSYTTGAIQGPTVLSFSNISSPTCGPASEDGPYVVSKASKRGKSCSHRLCECDRR 126
+ + G + GP V ++S + DG + + C +C CDR
Sbjct: 54 -KAEKLPECKGILSGPYVNTYSYDCT--------DGKLTCNDQKDK---CKLFICNCDRT 101
Query: 127 FSECL 131
+ C
Sbjct: 102 AAMCF 106
>pdb|1OZY|A Chain A, Crystal Structure Of Phospholipase A2 (mipla3) From
Micropechis Ikaheka
pdb|1OZY|B Chain B, Crystal Structure Of Phospholipase A2 (mipla3) From
Micropechis Ikaheka
Length = 121
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 24/126 (19%)
Query: 8 VQLYSMVSCST-GCDPL-SYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYII 65
+Q M+ C+ G +PL ++ YGCYCG GSG PVD +DR Q HD ++
Sbjct: 3 LQFRKMIKCTIPGIEPLLAFSNYGCYCGKGGSGTPVDELDRCCQT-----HDYCYD---- 53
Query: 66 FIYSGVVSYTTGAIQGPTVLSFSNISSPTCGPASEDGPYVVSKASKRGKSCSHRLCECDR 125
+ + G + GP+ +++ + DG + + C +C CDR
Sbjct: 54 --KAKIHPECRGILSGPSFNTYAYDCT--------DGKLTCNDQKDK---CKLFICNCDR 100
Query: 126 RFSECL 131
+ C
Sbjct: 101 TAAMCF 106
>pdb|5P2P|A Chain A, X-Ray Structure Of Phospholipase A2 Complexed With A
Substrate-Derived Inhibitor
pdb|5P2P|B Chain B, X-Ray Structure Of Phospholipase A2 Complexed With A
Substrate-Derived Inhibitor
Length = 119
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 8 VQLYSMVSCST-GCDPL-SYKGYGCYCGFLGSGYPVDPIDRTSQL--NMARD 55
Q SM+ C+ G PL + YGCYCG+ GSG PVD +DR + N RD
Sbjct: 3 FQFRSMIKCAIPGSHPLMDFNNYGCYCGWGGSGTPVDELDRCCETHDNCYRD 54
>pdb|1PO8|A Chain A, Crystal Structure Of A Complex Formed Between Krait
Venom Phospholipase A2 And Heptanoic Acid At 2.7 A
Resolution.
pdb|1TC8|A Chain A, Crystal Structure Of Krait-Venom Phospholipase A2 In A
Complex With A Natural Fatty Acid Tridecanoic Acid
Length = 118
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 24/38 (63%)
Query: 9 QLYSMVSCSTGCDPLSYKGYGCYCGFLGSGYPVDPIDR 46
QL +M+ C+ SY YGCYCG GSG PVD +DR
Sbjct: 4 QLMNMIQCANTRTWPSYTNYGCYCGKGGSGTPVDDLDR 41
>pdb|1CL5|A Chain A, Crystal Structure Of Phospholipase A2 From Daboia Russelli
Pulchella
pdb|1CL5|B Chain B, Crystal Structure Of Phospholipase A2 From Daboia Russelli
Pulchella
pdb|1FB2|A Chain A, Structure Of Phospholipase A2 From Daboia Russelli
Pulchella At 1.95
pdb|1FB2|B Chain B, Structure Of Phospholipase A2 From Daboia Russelli
Pulchella At 1.95
pdb|1KPM|A Chain A, First Structural Evidence Of A Specific Inhibition Of
Phospholipase A2 By Vitamin E And Its Implications In
Inflammation: Crystal Structure Of The Complex Formed
Between Phospholipase A2 And Vitamin E At 1.8 A
Resolution.
pdb|1KPM|B Chain B, First Structural Evidence Of A Specific Inhibition Of
Phospholipase A2 By Vitamin E And Its Implications In
Inflammation: Crystal Structure Of The Complex Formed
Between Phospholipase A2 And Vitamin E At 1.8 A
Resolution.
pdb|1FV0|A Chain A, First Structural Evidence Of The Inhibition Of
Phospholipase A2 By Aristolochic Acid: Crystal Structure
Of A Complex Formed Between Phospholipase A2 And
Aristolochic Acid
pdb|1FV0|B Chain B, First Structural Evidence Of The Inhibition Of
Phospholipase A2 By Aristolochic Acid: Crystal Structure
Of A Complex Formed Between Phospholipase A2 And
Aristolochic Acid
pdb|1JQ8|A Chain A, Design Of Specific Inhibitors Of Phospholipase A2: Crystal
Structure Of A Complex Formed Between Phospholipase A2
From Daboia Russelli Pulchella And A Designed
Pentapeptide Leu-Ala-Ile-Tyr-Ser At 2.0 Resolution
pdb|1JQ8|B Chain B, Design Of Specific Inhibitors Of Phospholipase A2: Crystal
Structure Of A Complex Formed Between Phospholipase A2
From Daboia Russelli Pulchella And A Designed
Pentapeptide Leu-Ala-Ile-Tyr-Ser At 2.0 Resolution
pdb|1JQ9|A Chain A, Crystal Structure Of A Complex Formed Between
Phospholipase A2 From Daboia Russelli Pulchella And A
Designed Pentapeptide Phe-Leu-Ser- Tyr-Lys At 1.8
Resolution
pdb|1JQ9|B Chain B, Crystal Structure Of A Complex Formed Between
Phospholipase A2 From Daboia Russelli Pulchella And A
Designed Pentapeptide Phe-Leu-Ser- Tyr-Lys At 1.8
Resolution
pdb|1OXL|A Chain A, Inhibition Of Phospholipase A2 (Pla2) By
(2-Carbamoylmethyl-
5-Propyl-Octahydro-Indol-7-Yl)-Acetic Acid (Indole):
Crystal Structure Of The Complex Formed Between Pla2
From Russell's Viper And Indole At 1.8 Resolution
pdb|1OXL|B Chain B, Inhibition Of Phospholipase A2 (Pla2) By
(2-Carbamoylmethyl-
5-Propyl-Octahydro-Indol-7-Yl)-Acetic Acid (Indole):
Crystal Structure Of The Complex Formed Between Pla2
From Russell's Viper And Indole At 1.8 Resolution
pdb|1SKG|A Chain A, Structure-Based Rational Drug Design: Crystal Structure Of
The Complex Formed Between Phospholipase A2 And A
Pentapeptide Val-Ala-Phe-Arg-Ser
pdb|1SQZ|A Chain A, Design Of Specific Inhibitors Of Phopholipase A2: Crystal
Structure Of The Complex Formed Between Group Ii
Phopholipase A2 And A Designed Peptide
Dehydro-Ile-Ala-Arg-Ser At 1.2a Resolution
pdb|1SV3|A Chain A, Structure Of The Complex Formed Between Phospholipase A2
And 4-methoxybenzoic Acid At 1.3a Resolution.
pdb|1SV9|A Chain A, Crystal Structure Of The Complex Formed Between Groupii
Phospholipase A2 And Anti-Inflammatory Agent 2-[(2,6-
Dichlorophenyl)amino] Benzeneacetic Acid At 2.7a
Resolution
pdb|1SXK|A Chain A, Crystal Structure Of A Complex Formed Between
Phospholipase A2 And A Non-Specific Anti-Inflammatory
Amino Salicylic Acid At 1.2 A Resolution
pdb|1Q7A|A Chain A, Crystal Structure Of The Complex Formed Between Russell's
Viper Phospholipase A2 And An Antiinflammatory Agent
Oxyphenbutazone At 1.6a Resolution
pdb|1TDV|A Chain A, Non-specific Binding To Phospholipase A2:crystal Structure
Of The Complex Of Pla2 With A Designed Peptide
Tyr-trp-ala- Ala-ala-ala At 1.7a Resolution
pdb|1TG1|A Chain A, Crystal Structure Of The Complex Formed Between Russells
Viper Phospholipase A2 And A Designed Peptide Inhibitor
Phq-Leu-Val-Arg-Tyr At 1.2a Resolution
pdb|1TG4|A Chain A, Design Of Specific Inhibitors Of Groupii Phospholipase
A2(Pla2): Crystal Structure Of The Complex Formed
Between Russells Viper Pla2 And Designed Peptide
Phe-Leu-Ala-Tyr- Lys At 1.7a Resolution
pdb|1TJ9|A Chain A, Structure Of The Complexed Formed Between Group Ii
Phospholipase A2 And A Rationally Designed Tetra
Peptide, Val-Ala-Arg-Ser At 1.1a Resolution
pdb|1TH6|A Chain A, Crystal Structure Of Phospholipase A2 In Complex With
Atropine At 1.23a Resolution
pdb|1TK4|A Chain A, Crystal Structure Of Russells Viper Phospholipase A2 In
Complex With A Specifically Designed Tetrapeptide
Ala-Ile- Arg-Ser At 1.1 A Resolution
pdb|1TP2|A Chain A, Crystal Structure Of The Complex Of Group Ii
Phospholipasea2 Dimer With A Fatty Acid Tridecanoic Acid
At 2.4 A Resolution
pdb|1TP2|B Chain B, Crystal Structure Of The Complex Of Group Ii
Phospholipasea2 Dimer With A Fatty Acid Tridecanoic Acid
At 2.4 A Resolution
pdb|1Y38|A Chain A, Crystal Structure Of The Complex Formed Between
Phospholipase A2 Dimer And Glycerophosphate At 2.4 A
Resolution
pdb|1Y38|B Chain B, Crystal Structure Of The Complex Formed Between
Phospholipase A2 Dimer And Glycerophosphate At 2.4 A
Resolution
pdb|1ZR8|A Chain A, Crystal Structure Of The Complex Formed Between Group Ii
Phospholipase A2 And A Plant Alkaloid Ajmaline At 2.0a
Resolution
pdb|1ZYX|A Chain A, Crystal Structure Of The Complex Of A Group Iia
Phospholipase A2 With A Synthetic Anti-Inflammatory
Agent Licofelone At 1.9a Resolution
pdb|1ZWP|A Chain A, The Atomic Resolution Crystal Structure Of The
Phospholipase A2 (Pla2) Complex With Nimesulide Reveals
Its Weaker Binding To Pla2
pdb|2ARM|A Chain A, Crystal Structure Of The Complex Of Phospholipase A2 With
A Natural Compound Atropine At 1.2 A Resolution
pdb|2B17|A Chain A, Specific Binding Of Non-Steroidal Anti-Inflammatory Drugs
(Nsaids) To Phospholipase A2: Crystal Structure Of The
Complex Formed Between Phospholipase A2 And Diclofenac
At 2.7 A Resolution:
pdb|2FNX|A Chain A, Design Of Specific Peptide Inhibitors Of Phospholipase A2
(Pla2): Crystal Structure Of The Complex Of Pla2 With A
Highly Potent Peptide Val-Ile-Ala-Lys At 2.7a Resolution
pdb|2G58|A Chain A, Crystal Structure Of A Complex Of Phospholipase A2 With A
Designed Peptide Inhibitor Dehydro-ile-ala-arg-ser At
0.98 A Resolution
pdb|2GNS|A Chain A, Design Of Specific Peptide Inhibitors Of Phospholipase A2:
Crystal Structure Of The Complex Formed Between A Group
Ii Phospholipase A2 And A Designed Pentapeptide Ala-
Leu- Val- Tyr- Lys At 2.3 A Resolution
pdb|2DPZ|A Chain A, Structure Of The Complex Of Phospholipase A2 With N-(4-
Hydroxyphenyl)- Acetamide At 2.1 A Resolution
pdb|2O1N|A Chain A, Crystal Structure Of A Complex Of Phospholipase A2 With A
Peptide Ala-Ile-Ala-Ser At 2.8 A Resolution
pdb|2OLI|A Chain A, Crystal Structure Of The Complex Formed Between A Group Ii
Phospholipase A2 And An Indole Derivative At 2.2 A
Resolution
pdb|2OTF|A Chain A, Crystal Structure Of The Complex Formed Between
Phospholipase A2 And Atenolol At 1.95 A Resolution
pdb|2OTH|A Chain A, Crystal Structure Of A Ternary Complex Of Phospholipase A2
With Indomethacin And Nimesulide At 2.9 A Resolution
pdb|2OUB|A Chain A, Crystal Structure Of The Complex Formed Between
Phospholipase A2 And Atenolol At 2.75 A Resolution
pdb|2OYF|A Chain A, Crystal Structure Of The Complex Of Phospholipase A2 With
Indole Acetic Acid At 1.2 A Resolution
pdb|2PMJ|A Chain A, Crystal Structure Of The Complex Formed Between
Phospholipase A2 And 1, 2 Benzopyrone At 2.4 A
Resolution
pdb|2PB8|A Chain A, Crystal Structure Of The Complex Formed Between
Phospholipase A2 And Peptide Ala-Val-Tyr-Ser At 2.0 A
Resolution
pdb|2PWS|A Chain A, Crystal Structure Of The Complex Formed Between
Phospholipase A2 And 2-(4-isobutyl-phenyl)-propionic
Acid At 2.2 A Resolution
pdb|2PYC|A Chain A, Crystal Structure Of A Monomeric Phospholipase A2 From
Russell's Viper At 1.5a Resolution
pdb|2Q1P|A Chain A, Crystal Structure Of Phospholipase A2 Complex With
Propanol At 1.5 A Resolution
pdb|2QU9|A Chain A, Crystal Structure Of The Complex Of Group Ii Phospholipase
A2 With Eugenol
pdb|2QUE|A Chain A, Saturation Of Substrate-Binding Site Using Two Natural
Ligands: Crystal Structure Of A Ternary Complex Of
Phospholipase A2 With Anisic Acid And Ajmaline At 2.25 A
Resolution
pdb|2QVD|A Chain A, Identification Of A Potent Anti-Inflammatory Agent From
The Natural Extract Of Plant Cardiospermun Helicacabum:
Crystal Structure Of The Complex Of Phospholipase A2
With Benzo(G)-1,3-Benzodioxolo(5,6-A) Quinolizinium,
5,6-Dihydro-9,10-Dimethoxy At 1.93 A Resolution
pdb|2ZBH|A Chain A, Crystal Structure Of The Complex Of Phospholipase A2 With
Bavachalcone From Aerva Lanata At 2.6 A Resolution
pdb|2QHW|A Chain A, Crystal Structure Of A Complex Of Phospholipase A2 With A
Gramine Derivative At 2.2 Resolution
pdb|3CBI|A Chain A, Crystal Structure Of The Ternary Complex Of Phospholipase
A2 With Ajmaline And Anisic Acid At 3.1 A Resolution
pdb|3CBI|B Chain B, Crystal Structure Of The Ternary Complex Of Phospholipase
A2 With Ajmaline And Anisic Acid At 3.1 A Resolution
pdb|3CBI|C Chain C, Crystal Structure Of The Ternary Complex Of Phospholipase
A2 With Ajmaline And Anisic Acid At 3.1 A Resolution
pdb|3CBI|D Chain D, Crystal Structure Of The Ternary Complex Of Phospholipase
A2 With Ajmaline And Anisic Acid At 3.1 A Resolution
pdb|3FG5|A Chain A, Crystal Structure Determination Of A Ternary Complex Of
Phospholipase A2 With A Pentapetide Flsyk And Ajmaline
At 2.5 A Resolution
pdb|3FO7|A Chain A, Simultaneous Inhibition Of Anti-Coagulation And
Inflammation: Crystal Structure Of Phospholipase A2
Complexed With Indomethacin At 1.4 A Resolution Reveals
The Presence Of The New Common Ligand Binding Site
pdb|3G8F|A Chain A, Crystal Structure Of The Complex Formed Between A Group Ii
Phospholipase A2 And Designed Peptide Inhibitor
Carbobenzoxy-Dehydro- Val-Ala-Arg-Ser At 1.2 A
Resolution
pdb|3H1X|A Chain A, Simultaneous Inhibition Of Anti-Coagulation And
Inflammation: Crystal Structure Of Phospholipase A2
Complexed With Indomethacin At 1.4 A Resolution Reveals
The Presence Of The New Common Ligand Binding Site
pdb|4EIX|A Chain A, Structural Studies Of The Ternary Complex Of Phaspholipase
A2 With Nimesulide And Indomethacin
pdb|4FGA|A Chain A, Design Of Peptide Inhibitors Of Group Ii Phospholipase A2:
Crystal Structure Of The Complex Of Phospholipsae A2
With A Designed Tripeptide, Ala- Tyr- Lys At 2.3 A
Resolution
pdb|4GFY|A Chain A, Design Of Peptide Inhibitors Of Phospholipase A2: Crystal
Structure Of Phospholipase A2 Complexed With A Designed
Tetrapeptide Val - Ilu- Ala - Lys At 2.7 A Resolution
pdb|4GLD|A Chain A, Crystal Structure Of The Complex Of Type Ii Phospholipase
A2 With A Designed Peptide Inhibitor Phe - Leu - Ala -
Tyr - Lys At 1.69 A Resolution
pdb|4HMB|A Chain A, Crystal Structure Of The Complex Of Group Ii Phospholipase
A2 With A
3-{3-[(Dimethylamino)methyl]-1h-Indol-7-Yl}propan-1-Ol
At 2.21 A Resolution
Length = 121
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 44/112 (39%), Gaps = 37/112 (33%)
Query: 24 SYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYIIFIYSGVVSYTTGAIQGPT 83
SY YGCYCG+ G G P D DR + HD
Sbjct: 20 SYSSYGCYCGWGGKGTPKDATDRCCFV-----HD-------------------------- 48
Query: 84 VLSFSNISSPTCGPASEDGPYVVSKAS---KRGKSCSHRLCECDRRFSECLR 132
+ N+ P C P S+ Y + ++G SC +R+CECD+ + C R
Sbjct: 49 -CCYGNL--PDCNPKSDRYKYKRVNGAIVCEKGTSCENRICECDKAAAICFR 97
>pdb|2PHI|A Chain A, A Large Conformational Change Is Found In The Crystal
Structure Of The Porcine Pancreatic Phospholipase A2
Point Mutant F63v
pdb|2PHI|B Chain B, A Large Conformational Change Is Found In The Crystal
Structure Of The Porcine Pancreatic Phospholipase A2
Point Mutant F63v
Length = 124
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 9 QLYSMVSCST-GCDPL-SYKGYGCYCGFLGSGYPVDPIDRTSQ 49
Q SM+ C+ G PL + YGCYCG GSG PVD +DR +
Sbjct: 4 QFRSMIKCAIPGSHPLMDFNNYGCYCGLGGSGTPVDELDRCCE 46
>pdb|1OYF|B Chain B, Crystal Structure Of Russelles Viper (Daboia Russellii
Pulchella) Phospholipase A2 In A Complex With Venom 6-
Methyl Heptanol
Length = 121
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 44/112 (39%), Gaps = 37/112 (33%)
Query: 24 SYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYIIFIYSGVVSYTTGAIQGPT 83
SY YGCYCG+ G G P D DR + HD
Sbjct: 20 SYSSYGCYCGWGGKGTPKDATDRCCFV-----HD-------------------------- 48
Query: 84 VLSFSNISSPTCGPASEDGPYVVSKAS---KRGKSCSHRLCECDRRFSECLR 132
+ N+ P C P S+ Y + ++G SC +R+CECD+ + C R
Sbjct: 49 -CCYGNL--PDCNPKSDRYKYKRVNGAIVCEKGTSCENRICECDKAAAICFR 97
>pdb|1OYF|A Chain A, Crystal Structure Of Russelles Viper (Daboia Russellii
Pulchella) Phospholipase A2 In A Complex With Venom 6-
Methyl Heptanol
Length = 121
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 44/112 (39%), Gaps = 37/112 (33%)
Query: 24 SYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYIIFIYSGVVSYTTGAIQGPT 83
SY YGCYCG+ G G P D DR + HD
Sbjct: 20 SYSSYGCYCGWGGKGTPKDATDRCCFV-----HD-------------------------- 48
Query: 84 VLSFSNISSPTCGPASEDGPYVVSKAS---KRGKSCSHRLCECDRRFSECLR 132
+ N+ P C P S+ Y + ++G SC +R+CECD+ + C R
Sbjct: 49 -CCYGNL--PDCNPQSDRYKYKRVNGAIVCEKGTSCENRICECDKAAAICFR 97
>pdb|1FX9|A Chain A, Carboxylic Ester Hydrolase Complex (Dimeric Pla2 + Mj33
Inhibitor + Sulphate Ions)
pdb|1FX9|B Chain B, Carboxylic Ester Hydrolase Complex (Dimeric Pla2 + Mj33
Inhibitor + Sulphate Ions)
pdb|1FXF|A Chain A, Carboxylic Ester Hydrolase Complex (Dimeric Pla2 + Mj33
Inhibitor + Phosphate Ions)
pdb|1FXF|B Chain B, Carboxylic Ester Hydrolase Complex (Dimeric Pla2 + Mj33
Inhibitor + Phosphate Ions)
pdb|1L8S|A Chain A, Carboxylic Ester Hydrolase Complex (Dimeric Pla2 + Lpc-
Ether + Acetate + Phosphate Ions)
pdb|1L8S|B Chain B, Carboxylic Ester Hydrolase Complex (Dimeric Pla2 + Lpc-
Ether + Acetate + Phosphate Ions)
pdb|2AZY|A Chain A, Crystal Structure Of Porcine Pancreatic Phospholipase A2
In Complex With Cholate
pdb|2AZZ|A Chain A, Crystal Structure Of Porcine Pancreatic Phospholipase A2
In Complex With Taurocholate
pdb|2B00|A Chain A, Crystal Structure Of Porcine Pancreatic Phospholipase A2
In Complex With Glycocholate
pdb|2B01|A Chain A, Crystal Structure Of Porcine Pancreatic Phospholipase A2
In Complex With Taurochenodeoxycholate
pdb|2B03|A Chain A, Crystal Structure Of Porcine Pancreatic Phospholipase A2
In Complex With Taurochenodeoxycholate
pdb|2B04|A Chain A, Crystal Structure Of Porcine Pancreatic Phospholipase A2
In Complex With Glycochenodeoxycholate
pdb|1P2P|A Chain A, Structure Of Porcine Pancreatic Phospholipase A2 At 2.6
Angstroms Resolution And Comparison With Bovine
Phospholipase A2
pdb|1PIR|A Chain A, Solution Structure Of Porcine Pancreatic Phospholipase
A2
pdb|1PIS|A Chain A, Solution Structure Of Porcine Pancreatic Phospholipase
A2
pdb|1SFV|A Chain A, Porcine Pancreas Phospholipase A2, Nmr, Minimized
Average Structure
pdb|1SFW|A Chain A, Porcine Pancreas Phospholipase A2, Nmr, 18 Structures
pdb|4P2P|A Chain A, An Independent Crystallographic Refinement Of Porcine
Phospholipase A2 At 2.4 Angstroms Resolution
pdb|3HSW|A Chain A, Crystal Structure Of Porcine Pancreatic Phospholipase A2
In Complex With 2-Methoxycyclohexa-2-5-Diene-1,4-Dione
pdb|3L30|A Chain A, Crystal Structure Of Porcine Pancreatic Phospholipase A2
Complexed With Dihydroxyberberine
pdb|3FVI|A Chain A, Crystal Structure Of Complex Of Phospholipase A2 With
Octyl Sulfates
pdb|3FVI|B Chain B, Crystal Structure Of Complex Of Phospholipase A2 With
Octyl Sulfates
pdb|3FVI|C Chain C, Crystal Structure Of Complex Of Phospholipase A2 With
Octyl Sulfates
pdb|3FVI|D Chain D, Crystal Structure Of Complex Of Phospholipase A2 With
Octyl Sulfates
pdb|3FVJ|A Chain A, Crystal Structure Of Phospholipase A2 1b Crystallized In
The Presence Of Octyl Sulfate
pdb|3O4M|A Chain A, Crystal Structure Of Porcine Pancreatic Phospholipase A2
In Complex With 1,2-Dihydroxybenzene
pdb|3QLM|A Chain A, Crystal Structure Of Porcine Pancreatic Phospholipase A2
In Complex With N-Hexadecanoic Acid
pdb|4DBK|A Chain A, Crystal Structure Of Porcine Pancreatic Phospholipase A2
Complexed With Berberine
pdb|4G5I|A Chain A, Crystal Structure Of Porcine Pancreatic Pla2 In Complex
With Dbp
Length = 124
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 9 QLYSMVSCST-GCDPL-SYKGYGCYCGFLGSGYPVDPIDRTSQ 49
Q SM+ C+ G PL + YGCYCG GSG PVD +DR +
Sbjct: 4 QFRSMIKCAIPGSHPLMDFNNYGCYCGLGGSGTPVDELDRCCE 46
>pdb|2ZP4|A Chain A, Carboxylic Ester Hydrolase, Single Mutant H48n Of Bovine
Pancreatic Pla2 Enzyme
Length = 123
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 19/29 (65%)
Query: 23 LSYKGYGCYCGFLGSGYPVDPIDRTSQLN 51
L + YGCYCG GSG PVD +DR Q N
Sbjct: 20 LDFNNYGCYCGLGGSGTPVDDLDRCCQTN 48
>pdb|3P2P|A Chain A, Enhanced Activity And Altered Specificity Of
Phospholipase A2 By Deletion Of A Surface Loop
pdb|3P2P|B Chain B, Enhanced Activity And Altered Specificity Of
Phospholipase A2 By Deletion Of A Surface Loop
Length = 119
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 9 QLYSMVSCST-GCDPL-SYKGYGCYCGFLGSGYPVDPIDRTSQL--NMARD 55
Q SM+ C+ G PL + YGCYCG GSG PVD +DR + N RD
Sbjct: 4 QFRSMIKCAIPGSHPLMDFNNYGCYCGLGGSGTPVDELDRCCETHDNCYRD 54
>pdb|1DPY|A Chain A, Three-Dimensional Structure Of A Novel Phospholipase A2
From Indian Common Krait At 2.45 A Resolution
Length = 118
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 49/134 (36%), Gaps = 37/134 (27%)
Query: 8 VQLYSMVSCSTGCDPLSYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYIIFI 67
+Q +M+ C+ +Y YGCYCG GSG PVD +DR DH I
Sbjct: 3 IQFKNMIQCAGTRIWTAYVAYGCYCGKGGSGTPVDELDRCC---YTHDHCYNEAEKI--- 56
Query: 68 YSGVVSYTTGAIQGPTVLSFSNISSPTCGPASEDGPYVVSK----ASKRGKSCSHRLCEC 123
P C P + Y ++ + +C+ LCEC
Sbjct: 57 -------------------------PGCNPNIKTYSYTCTQPNLTCTDSADTCAQFLCEC 91
Query: 124 DRRFSECL--RPYS 135
DR + C PY+
Sbjct: 92 DRTAAICFASAPYN 105
>pdb|1GP7|A Chain A, Acidic Phospholipase A2 From Venom Of Ophiophagus Hannah
pdb|1GP7|B Chain B, Acidic Phospholipase A2 From Venom Of Ophiophagus Hannah
pdb|1GP7|C Chain C, Acidic Phospholipase A2 From Venom Of Ophiophagus Hannah
Length = 151
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 53/137 (38%), Gaps = 26/137 (18%)
Query: 8 VQLYSMVSCSTG--CDPLSYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYII 65
+Q +M+ C+ + Y YGCYCG GSG PVD +DR Q+ HD+ +
Sbjct: 30 IQFGNMIQCTVPGFLSWIKYADYGCYCGAGGSGTPVDKLDRCCQV-----HDNCY----- 79
Query: 66 FIYSGVVSYTTGAIQGPTVLSFSNISSPTCGPASEDGPYVVSKASKRGKSCSHRLCECDR 125
T A + P S + SP S D C+ +C CDR
Sbjct: 80 ----------TQAQKLPACSSI--MDSPYVKIYSYDCSERTVTCKADNDECAAFICNCDR 127
Query: 126 RFSECL--RPYSCPKYK 140
+ C PY+ Y
Sbjct: 128 VAAHCFAASPYNNNNYN 144
>pdb|1GH4|A Chain A, Structure Of The Triple Mutant (K56m, K120m, K121m) Of
Phospholipase A2
Length = 123
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 24/115 (20%)
Query: 23 LSYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYIIFIYSGVVSYTTGAIQGP 82
L + YGCYCG GSG PVD +DR Q HD+ ++ + V+ + P
Sbjct: 20 LDFNNYGCYCGLGGSGTPVDDLDRCCQT-----HDNCYKQAMKLDSCKVL------VDNP 68
Query: 83 TVLSFSNISSPTCGPASEDGPYVVSKASKRGKSCSHRLCECDRRFSECLR--PYS 135
++N S +C S +C +C CDR + C PY+
Sbjct: 69 ----YTNNYSYSCSNNE-------ITCSSENNACEAFICNCDRNAAICFSKVPYN 112
>pdb|1Y6O|A Chain A, Crystal Structure Of Disulfide Engineered Porcine
Pancreatic Phospholipase A2 To Group-X Isozyme In
Complex With Inhibitor Mj33 And Phosphate Ions
pdb|1Y6O|B Chain B, Crystal Structure Of Disulfide Engineered Porcine
Pancreatic Phospholipase A2 To Group-X Isozyme In
Complex With Inhibitor Mj33 And Phosphate Ions
pdb|1Y6P|A Chain A, Crystal Structure Of Disulfide Engineered Porcine
Pancratic Phospholipase A2 To Group-x Isozyme
pdb|1Y6P|B Chain B, Crystal Structure Of Disulfide Engineered Porcine
Pancratic Phospholipase A2 To Group-x Isozyme
Length = 131
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 9 QLYSMVSCST-GCDPL-SYKGYGCYCGFLGSGYPVDPIDRTSQ 49
Q S++ C+ G PL + YGCYCG GSG PVD +DR +
Sbjct: 4 QFRSLIKCAIPGSHPLLDFNNYGCYCGLGGSGTPVDELDRCCE 46
>pdb|1MKS|A Chain A, Carboxylic Ester Hydrolase, Trigonal Form Of The Triple
Mutant
pdb|1MKU|A Chain A, Carboxylic Ester Hydrolase, Orthorhombic Form Of The
Triple Mutant
Length = 123
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 9 QLYSMVSCST-GCDPL-SYKGYGCYCGFLGSGYPVDPIDRTSQ 49
Q M+ C +PL + YGCYCG GSG PVD +DR Q
Sbjct: 4 QFNGMIKCKIPSSEPLLDFNNYGCYCGLGGSGTPVDDLDRCCQ 46
>pdb|1FE5|A Chain A, Sequence And Crystal Structure Of A Basic Phospholipase
A2 From Common Krait (Bungarus Caeruleus) At 2.4
Resolution: Identification And Characterization Of Its
Pharmacological Sites
Length = 118
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 8 VQLYSMVSCSTGCDPLSYKGYGCYCGFLGSGYPVDPIDR 46
+Q +M+ C+ +Y YGCYCG GSG PVD +DR
Sbjct: 3 IQFKNMIQCAGTRPWTAYVNYGCYCGKGGSGTPVDELDR 41
>pdb|1BPQ|A Chain A, Phospholipase A2 Engineering. X-Ray Structural And
Functional Evidence For The Interaction Of Lysine-56
With Substrates
Length = 123
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 24/115 (20%)
Query: 23 LSYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYIIFIYSGVVSYTTGAIQGP 82
L + YGCYCG GSG PVD +DR Q HD+ ++ + V+ + P
Sbjct: 20 LDFNNYGCYCGLGGSGTPVDDLDRCCQT-----HDNCYKQAMKLDSCKVL------VDNP 68
Query: 83 TVLSFSNISSPTCGPASEDGPYVVSKASKRGKSCSHRLCECDRRFSECLR--PYS 135
++N S +C S +C +C CDR + C PY+
Sbjct: 69 ----YTNNYSYSCSNNE-------ITCSSENNACEAFICNCDRNAAICFSKVPYN 112
>pdb|1IRB|A Chain A, Carboxylic Ester Hydrolase
Length = 123
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 18/27 (66%)
Query: 23 LSYKGYGCYCGFLGSGYPVDPIDRTSQ 49
L + YGCYCG GSG PVD +DR Q
Sbjct: 20 LDFNNYGCYCGLGGSGTPVDDLDRCCQ 46
>pdb|2BCH|A Chain A, A Possible Of Second Calcium Ion In Interfacial Binding:
Atomic And Medium Resolution Crystal Structures Of The
Quadruple Mutant Of Phospholipase A2
pdb|2BD1|A Chain A, A Possible Role Of The Second Calcium Ion In Interfacial
Binding: Atomic And Medium Resolution Crystal
Structures Of The Quadruple Mutant Of Phospholipase A2
pdb|2BD1|B Chain B, A Possible Role Of The Second Calcium Ion In Interfacial
Binding: Atomic And Medium Resolution Crystal
Structures Of The Quadruple Mutant Of Phospholipase A2
Length = 123
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 18/27 (66%)
Query: 23 LSYKGYGCYCGFLGSGYPVDPIDRTSQ 49
L + YGCYCG GSG PVD +DR Q
Sbjct: 20 LDFNNYGCYCGLGGSGTPVDDLDRCCQ 46
>pdb|1C74|A Chain A, Structure Of The Double Mutant (K53,56m) Of
Phospholipase A2
pdb|2BAX|A Chain A, Atomic Resolution Structure Of The Double Mutant
(K53,56m) Of Bovine Pancreatic Phospholipase A2
Length = 123
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 18/27 (66%)
Query: 23 LSYKGYGCYCGFLGSGYPVDPIDRTSQ 49
L + YGCYCG GSG PVD +DR Q
Sbjct: 20 LDFNNYGCYCGLGGSGTPVDDLDRCCQ 46
>pdb|2ZP3|A Chain A, Carboxylic Ester Hydrolase, Single Mutant D49n Of Bovine
Pancreatic Pla2 Enzyme
Length = 123
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 18/27 (66%)
Query: 23 LSYKGYGCYCGFLGSGYPVDPIDRTSQ 49
L + YGCYCG GSG PVD +DR Q
Sbjct: 20 LDFNNYGCYCGLGGSGTPVDDLDRCCQ 46
>pdb|1CEH|A Chain A, Structure And Function Of The Catalytic Site Mutant
Asp99asn Of Phospholipase A2: Absence Of Conserved
Structural Water
Length = 123
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 18/27 (66%)
Query: 23 LSYKGYGCYCGFLGSGYPVDPIDRTSQ 49
L + YGCYCG GSG PVD +DR Q
Sbjct: 20 LDFNNYGCYCGLGGSGTPVDDLDRCCQ 46
>pdb|1VL9|A Chain A, Atomic Resolution (0.97a) Structure Of The Triple Mutant
(K53,56,121m) Of Bovine Pancreatic Phospholipase A2
pdb|2B96|A Chain A, Third Calcium Ion Found In An Inhibitor Bound
Phospholipase A2
Length = 123
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 18/27 (66%)
Query: 23 LSYKGYGCYCGFLGSGYPVDPIDRTSQ 49
L + YGCYCG GSG PVD +DR Q
Sbjct: 20 LDFNNYGCYCGLGGSGTPVDDLDRCCQ 46
>pdb|1O2E|A Chain A, Structure Of The Triple Mutant (K53,56,120m) + Anisic
Acid Complex Of Phospholipase A2
pdb|1O3W|A Chain A, Structure Of The Inhibitor Free Triple Mutant
(K53,56,120m) Of Phospholipase A2
pdb|1VKQ|A Chain A, A Re-Determination Of The Structure Of The Triple Mutant
(K53,56,120m) Of Phospholipase A2 At 1.6a Resolution
Using Sulphur-Sas At 1.54a Wavelength
Length = 123
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 18/27 (66%)
Query: 23 LSYKGYGCYCGFLGSGYPVDPIDRTSQ 49
L + YGCYCG GSG PVD +DR Q
Sbjct: 20 LDFNNYGCYCGLGGSGTPVDDLDRCCQ 46
>pdb|1G2X|A Chain A, Sequence Induced Trimerization Of Krait Pla2: Crystal
Structure Of The Trimeric Form Of Krait Pla2
pdb|1G2X|B Chain B, Sequence Induced Trimerization Of Krait Pla2: Crystal
Structure Of The Trimeric Form Of Krait Pla2
pdb|1G2X|C Chain C, Sequence Induced Trimerization Of Krait Pla2: Crystal
Structure Of The Trimeric Form Of Krait Pla2
pdb|2OSN|A Chain A, An Alternate Description Of A Crystal Structure Of
Phospholipase A2 From Bungarus Caeruleus
Length = 118
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 52/133 (39%), Gaps = 37/133 (27%)
Query: 9 QLYSMVSCSTGCDPLSYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYIIFIY 68
Q +M+ C+ +Y YGCYCG GSG PVD +DR HD +
Sbjct: 4 QFKNMIQCAGTRTWTAYINYGCYCGKGGSGTPVDKLDR-----CCYTHDHCYN------- 51
Query: 69 SGVVSYTTGAIQGPTVLSFSNISSPTCGPASEDGPYVVSK----ASKRGKSCSHRLCECD 124
Q ++ P C P + Y ++ ++ +C+ LC+CD
Sbjct: 52 -----------QADSI--------PGCNPNIKTYSYTCTQPNITCTRTADACAKFLCDCD 92
Query: 125 RRFSECL--RPYS 135
R + C PY+
Sbjct: 93 RTAAICFASAPYN 105
>pdb|1KVX|A Chain A, Carboxylic Ester Hydrolase, Single Mutant D99a Of Bovine
Pancreatic Pla2, 1.9 A Orthorhombic Form
Length = 123
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 18/27 (66%)
Query: 23 LSYKGYGCYCGFLGSGYPVDPIDRTSQ 49
L + YGCYCG GSG PVD +DR Q
Sbjct: 20 LDFNNYGCYCGLGGSGTPVDDLDRCCQ 46
>pdb|1KVY|A Chain A, Carboxylic Ester Hydrolase, Single Mutant D49e
Coordinated To Calcium
Length = 123
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 18/27 (66%)
Query: 23 LSYKGYGCYCGFLGSGYPVDPIDRTSQ 49
L + YGCYCG GSG PVD +DR Q
Sbjct: 20 LDFNNYGCYCGLGGSGTPVDDLDRCCQ 46
>pdb|2ZP5|A Chain A, Carboxylic Ester Hydrolase, Single Mutant D49k Of Bovine
Pancreatic Pla2 Enzyme
Length = 123
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 18/27 (66%)
Query: 23 LSYKGYGCYCGFLGSGYPVDPIDRTSQ 49
L + YGCYCG GSG PVD +DR Q
Sbjct: 20 LDFNNYGCYCGLGGSGTPVDDLDRCCQ 46
>pdb|1KVW|A Chain A, Carboxylic Ester Hydrolase, Single Mutant H48q Of Bovine
Pancreatic Pla2 Enzyme
Length = 123
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 18/27 (66%)
Query: 23 LSYKGYGCYCGFLGSGYPVDPIDRTSQ 49
L + YGCYCG GSG PVD +DR Q
Sbjct: 20 LDFNNYGCYCGLGGSGTPVDDLDRCCQ 46
>pdb|1BVM|A Chain A, Solution Nmr Structure Of Bovine Pancreatic
Phospholipase A2, 20 Structures
pdb|1G4I|A Chain A, Crystal Structure Of The Bovine Pancreatic Phospholipase
A2 At 0.97a
pdb|1BP2|A Chain A, Structure Of Bovine Pancreatic Phospholipase A2 At 1.7
Angstroms Resolution
pdb|1FDK|A Chain A, Carboxylic Ester Hydrolase (Pla2-Mj33 Inhibitor Complex)
pdb|1MKT|A Chain A, Carboxylic Ester Hydrolase, 1.72 Angstrom Trigonal Form
Of The Bovine Recombinant Pla2 Enzyme
pdb|1MKV|A Chain A, Carboxylic Ester Hydrolase Complex (Pla2 + Transition
State Analog Complex)
pdb|1UNE|A Chain A, Carboxylic Ester Hydrolase, 1.5 Angstrom Orthorhombic
Form Of The Bovine Recombinant Pla2
pdb|2BPP|A Chain A, Phospholipase A2 Engineering. X-Ray Structural And
Functional Evidence For The Interaction Of Lysine-56
With Substrates
Length = 123
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 18/27 (66%)
Query: 23 LSYKGYGCYCGFLGSGYPVDPIDRTSQ 49
L + YGCYCG GSG PVD +DR Q
Sbjct: 20 LDFNNYGCYCGLGGSGTPVDDLDRCCQ 46
>pdb|3BP2|A Chain A, Role Of The N-Terminus In The Interaction Of Pancreatic
Phospholipase A2 With Aggregated Substrates. Properties
And Crystal Structure Of Transaminated Phospholipase A2
Length = 123
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 18/27 (66%)
Query: 23 LSYKGYGCYCGFLGSGYPVDPIDRTSQ 49
L + YGCYCG GSG PVD +DR Q
Sbjct: 20 LDFNNYGCYCGLGGSGTPVDDLDRCCQ 46
>pdb|1BJJ|A Chain A, Agkistrodotoxin, A Phospholipase A2-Type Presynaptic
Neurotoxin From Agkistrodon Halys Pallas
pdb|1BJJ|B Chain B, Agkistrodotoxin, A Phospholipase A2-Type Presynaptic
Neurotoxin From Agkistrodon Halys Pallas
pdb|1BJJ|C Chain C, Agkistrodotoxin, A Phospholipase A2-Type Presynaptic
Neurotoxin From Agkistrodon Halys Pallas
pdb|1BJJ|D Chain D, Agkistrodotoxin, A Phospholipase A2-Type Presynaptic
Neurotoxin From Agkistrodon Halys Pallas
pdb|1BJJ|E Chain E, Agkistrodotoxin, A Phospholipase A2-Type Presynaptic
Neurotoxin From Agkistrodon Halys Pallas
pdb|1BJJ|F Chain F, Agkistrodotoxin, A Phospholipase A2-Type Presynaptic
Neurotoxin From Agkistrodon Halys Pallas
Length = 122
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 53/127 (41%), Gaps = 34/127 (26%)
Query: 8 VQLYSMVSCSTGCDPLS-YKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYIIF 66
+Q M+ TG + + Y YGCYCG+ G G P D DR + HD
Sbjct: 3 LQFNKMIKEETGKNAIPFYAFYGCYCGWGGQGKPKDGTDRCCFV-----HDC-------- 49
Query: 67 IYSGVVSYTTGAIQGPTVLSFS-NISSPTCGPASEDGPYVVSKASKRGKSCSHRLCECDR 125
Y +V+ T + + S+S TCG +G +C ++CECDR
Sbjct: 50 CYGRLVNCNTKS----DIYSYSLKEGYITCG---------------KGTNCEEQICECDR 90
Query: 126 RFSECLR 132
+EC R
Sbjct: 91 VAAECFR 97
>pdb|3VBZ|A Chain A, Crystal Structure Of Taipoxin Beta Subunit Isoform 2
pdb|3VBZ|B Chain B, Crystal Structure Of Taipoxin Beta Subunit Isoform 2
Length = 118
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 23 LSYKGYGCYCGFLGSGYPVDPIDRTSQLN 51
L + YGCYCG +G G PVD +DR Q++
Sbjct: 20 LDFMNYGCYCGTVGRGTPVDDLDRCCQVH 48
>pdb|3VC0|A Chain A, Crystal Structure Of Taipoxin Beta Subunit Isoform 1
Length = 118
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 8 VQLYSMVSCSTGCD--PLSYKGYGCYCGFLGSGYPVDPIDRTSQLN 51
VQ M+ C+ L + YGCYCG GSG PVD +DR Q++
Sbjct: 3 VQFGKMIECAIRNRRPALDFMNYGCYCGKGGSGTPVDDLDRCCQVH 48
>pdb|2QOG|B Chain B, Crotoxin B, The Basic Pla2 From Crotalus Durissus
Terrificus.
pdb|2QOG|C Chain C, Crotoxin B, The Basic Pla2 From Crotalus Durissus
Terrificus
Length = 122
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 41/108 (37%), Gaps = 31/108 (28%)
Query: 25 YKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYIIFIYSGVVSYTTGAIQGPTV 84
Y YGCYCG+ G G P D DR + HD Y + T P
Sbjct: 21 YAFYGCYCGWGGRGRPKDATDRCCFV-----HDC--------CYGKLAKCNTKWDIYPYS 67
Query: 85 LSFSNISSPTCGPASEDGPYVVSKASKRGKSCSHRLCECDRRFSECLR 132
L I TCG +G C ++CECDR +ECLR
Sbjct: 68 LKSGYI---TCG---------------KGTWCEEQICECDRVAAECLR 97
>pdb|1M8R|A Chain A, Crystal Structures Of Cadmium-Binding Acidic Phospholipase
A2 From The Venom Of Agkistrodon Halys Pallas At 1.9
Resolution (Crystal Grown At Ph 7.4)
pdb|1M8S|A Chain A, Crystal Structures Of Cadmium-Binding Acidic Phospholipase
A2 From The Venom Of Agkistrodon Halys Pallas At 1.9
Resolution (Crystal Grown At Ph 5.9)
Length = 124
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 37/108 (34%), Gaps = 31/108 (28%)
Query: 25 YKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYIIFIYSGVVSYTTGAIQGPTV 84
Y YGCYCG+ G G P D DR F++ TG V
Sbjct: 21 YSNYGCYCGWGGQGRPQDATDR-----------------CCFVHDCCYGKVTGCDPKMDV 63
Query: 85 LSFSNISSPTCGPASEDGPYVVSKASKRGKSCSHRLCECDRRFSECLR 132
SFS E+G V C +CECDR + C R
Sbjct: 64 YSFS----------EENGDIVCGGDD----PCKKEICECDRAAAICFR 97
>pdb|1CLP|A Chain A, Crystal Structure Of A Calcium-Independent
Phospholipaselike Myotoxic Protein From Bothrops Asper
Venom
pdb|1CLP|B Chain B, Crystal Structure Of A Calcium-Independent
Phospholipaselike Myotoxic Protein From Bothrops Asper
Venom
pdb|1Y4L|A Chain A, Crystal Structure Of Bothrops Asper Myotoxin Ii Complexed
With The Anti-Trypanosomal Drug Suramin
pdb|1Y4L|B Chain B, Crystal Structure Of Bothrops Asper Myotoxin Ii Complexed
With The Anti-Trypanosomal Drug Suramin
Length = 121
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 47/129 (36%), Gaps = 34/129 (26%)
Query: 6 SAVQLYSMVSCSTGCDPL-SYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYI 64
S +L M+ TG +P SY YGC CG LG G P D DR
Sbjct: 1 SLFELGKMILQETGKNPAKSYGAYGCNCGVLGRGKPKDATDR-----------------C 43
Query: 65 IFIYSGVVSYTTGAIQGPTVLSFS-NISSPTCGPASEDGPYVVSKASKRGKSCSHRLCEC 123
+++ TG S+S + CG + SC LCEC
Sbjct: 44 CYVHKCCYKKLTGCNPKKDRYSYSWKDKTIVCGENN---------------SCLKELCEC 88
Query: 124 DRRFSECLR 132
D+ + CLR
Sbjct: 89 DKAVAICLR 97
>pdb|1VIP|A Chain A, Anticoagulant Class Ii Phospholipase A2 From The Venom
Of Vipera Russelli Russelli
Length = 121
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 9 QLYSMVSCSTGCDPLS-YKGYGCYCGFLGSGYPVDPIDR 46
Q M+ TG +PLS Y YGCYCG+ G G P D DR
Sbjct: 4 QFAEMIVKMTGKNPLSSYSDYGCYCGWGGKGKPQDATDR 42
>pdb|4DCF|A Chain A, Structure Of Mtx-Ii From Bothrops Brazili
pdb|4DCF|B Chain B, Structure Of Mtx-Ii From Bothrops Brazili
pdb|4DCF|C Chain C, Structure Of Mtx-Ii From Bothrops Brazili
pdb|4DCF|D Chain D, Structure Of Mtx-Ii From Bothrops Brazili
Length = 122
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 6 SAVQLYSMVSCSTGCDPL-SYKGYGCYCGFLGSGYPVDPIDR 46
S V+L M+ TG +P SY YGC CG LG G P D DR
Sbjct: 1 SLVELGKMILQETGKNPAKSYGAYGCNCGVLGRGKPKDATDR 42
>pdb|1S6B|B Chain B, X-ray Crystal Structure Of A Complex Formed Between Two
Homologous Isoforms Of Phospholipase A2 From Naja Naja
Sagittifera: Principle Of Molecular Association And
Inactivation
pdb|1XXW|B Chain B, Structure Of Zinc Induced Heterodimer Of Two Calcium
Free Isoforms Of Phospholipase A2 From Naja Naja
Sagittifera At 2.7a Resolution
pdb|2RD4|B Chain B, Design Of Specific Inhibitors Of Phospholipase A2:
Crystal Structure Of The Complex Of Phospholipase A2
With Pentapeptide Leu-Val-Phe-Phe-Ala At 2.9 A
Resolution
Length = 119
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 7/46 (15%)
Query: 9 QLYSMVSCSTGCDP----LSYKGYGCYCGFLGSGYPVDPIDRTSQL 50
Q +M+SC+ P + YGCYCG GSG PVD +DR Q+
Sbjct: 4 QFKNMISCTV---PSRSWWDFADYGCYCGRGGSGTPVDDLDRCCQV 46
>pdb|1QLL|A Chain A, Piratoxin-Ii (Prtx-Ii) - A K49 Pla2 From Bothrops Pirajai
pdb|1QLL|B Chain B, Piratoxin-Ii (Prtx-Ii) - A K49 Pla2 From Bothrops Pirajai
Length = 121
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 48/129 (37%), Gaps = 34/129 (26%)
Query: 6 SAVQLYSMVSCSTGCDPL-SYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYI 64
S +L M+ TG +P SY YGC CG LG G P D DR
Sbjct: 1 SLFELGKMILQETGKNPAKSYGAYGCNCGVLGRGKPKDATDR-----------------C 43
Query: 65 IFIYSGVVSYTTGAIQGPTVLSFS-NISSPTCGPASEDGPYVVSKASKRGKSCSHRLCEC 123
+++ TG S+S + CG E+ P C LCEC
Sbjct: 44 CYVHKCCYKKLTGCNPKKDRYSYSWKDKTIVCG---ENNP------------CLKELCEC 88
Query: 124 DRRFSECLR 132
D+ + CLR
Sbjct: 89 DKAVAICLR 97
>pdb|1BK9|A Chain A, Phospholipase A2 Modified By Pbpb
pdb|1PSJ|A Chain A, Acidic Phospholipase A2 From Agkistrodon Halys Pallas
Length = 124
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 37/110 (33%), Gaps = 31/110 (28%)
Query: 23 LSYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYIIFIYSGVVSYTTGAIQGP 82
Y YGCYCG+ G G P D DR F++ TG
Sbjct: 19 FWYSNYGCYCGWGGQGRPQDATDR-----------------CCFVHDCCYGKVTGCDPKM 61
Query: 83 TVLSFSNISSPTCGPASEDGPYVVSKASKRGKSCSHRLCECDRRFSECLR 132
V SFS E+G V C +CECDR + C R
Sbjct: 62 DVYSFS----------EENGDIVCGGDD----PCKKEICECDRAAAICFR 97
>pdb|3T0R|A Chain A, Crystal Structure Of Mjtx-I, A Myotoxic
Lys49-Phospholipase A2 From Bothrops Moojeni
pdb|3T0R|B Chain B, Crystal Structure Of Mjtx-I, A Myotoxic
Lys49-Phospholipase A2 From Bothrops Moojeni
pdb|3T0R|C Chain C, Crystal Structure Of Mjtx-I, A Myotoxic
Lys49-Phospholipase A2 From Bothrops Moojeni
pdb|3T0R|D Chain D, Crystal Structure Of Mjtx-I, A Myotoxic
Lys49-Phospholipase A2 From Bothrops Moojeni
Length = 121
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 6 SAVQLYSMVSCSTGCDPL-SYKGYGCYCGFLGSGYPVDPIDR 46
S V+L M+ TG +P SY YGC CG LG G P D DR
Sbjct: 1 SLVELGKMILQETGKNPAKSYGAYGCNCGVLGRGKPKDATDR 42
>pdb|2Q2J|A Chain A, Crystal Structure Of Prtx-I, A Pla2 Homolog From Bothrops
Pirajai
pdb|2Q2J|B Chain B, Crystal Structure Of Prtx-I, A Pla2 Homolog From Bothrops
Pirajai
pdb|3CYL|A Chain A, Crystal Structure Of Piratoxin I (A Myotoxic Lys49-Pla2)
Complexed With Alpha-Tocopherol
pdb|3CYL|B Chain B, Crystal Structure Of Piratoxin I (A Myotoxic Lys49-Pla2)
Complexed With Alpha-Tocopherol
Length = 121
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 48/129 (37%), Gaps = 34/129 (26%)
Query: 6 SAVQLYSMVSCSTGCDPL-SYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYI 64
S +L M+ TG +P SY YGC CG LG G P D DR
Sbjct: 1 SLFELGKMILQETGKNPAKSYGAYGCNCGVLGRGKPKDATDR-----------------C 43
Query: 65 IFIYSGVVSYTTGAIQGPTVLSFS-NISSPTCGPASEDGPYVVSKASKRGKSCSHRLCEC 123
+++ TG S+S + CG E+ P C LCEC
Sbjct: 44 CYVHKCCYKKLTGCNPKKDRYSYSWKDKTIVCG---ENNP------------CLKELCEC 88
Query: 124 DRRFSECLR 132
D+ + CLR
Sbjct: 89 DKAVAICLR 97
>pdb|2OK9|A Chain A, Prtx-I-Bpb
pdb|2OK9|B Chain B, Prtx-I-Bpb
pdb|3QNL|A Chain A, Crystal Structure Of Prtx-I Complexed To Rosmarinic Acid
pdb|3QNL|B Chain B, Crystal Structure Of Prtx-I Complexed To Rosmarinic Acid
Length = 121
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 48/129 (37%), Gaps = 34/129 (26%)
Query: 6 SAVQLYSMVSCSTGCDPL-SYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYI 64
S +L M+ TG +P SY YGC CG LG G P D DR
Sbjct: 1 SLFELGKMILQETGKNPAKSYGAYGCNCGVLGRGKPKDATDR-----------------C 43
Query: 65 IFIYSGVVSYTTGAIQGPTVLSFS-NISSPTCGPASEDGPYVVSKASKRGKSCSHRLCEC 123
+++ TG S+S + CG E+ P C LCEC
Sbjct: 44 CYVHKCCYKKLTGCNPKKDRYSYSWKDKTIVCG---ENNP------------CLKELCEC 88
Query: 124 DRRFSECLR 132
D+ + CLR
Sbjct: 89 DKAVAICLR 97
>pdb|3CXI|A Chain A, Structure Of Bthtx-I Complexed With Alpha-Tocopherol
pdb|3CXI|B Chain B, Structure Of Bthtx-I Complexed With Alpha-Tocopherol
pdb|3HZD|A Chain A, Crystal Structure Of Bothropstoxin-I (Bthtx-I), A Pla2
Homologue From Bothrops Jararacussu Venom
pdb|3HZD|B Chain B, Crystal Structure Of Bothropstoxin-I (Bthtx-I), A Pla2
Homologue From Bothrops Jararacussu Venom
pdb|3I3I|A Chain A, Crystal Structure Of Bothropstoxin-I Crystallized At 283 K
pdb|3HZW|A Chain A, Crystal Structure Of Bothropstoxin-I Chemically Modified
By P- Bromophenacyl Bromide (Bpb)
pdb|3HZW|B Chain B, Crystal Structure Of Bothropstoxin-I Chemically Modified
By P- Bromophenacyl Bromide (Bpb)
pdb|3I03|A Chain A, Crystal Structure Of Bothropstoxin-I Chemically Modified
By P- Bromophenacyl Bromide (Bpb) - Monomeric Form At A
High Resolution
pdb|3I3H|A Chain A, Crystal Structure Of Bothropstoxin-I Crystallized At 291k
pdb|3I3H|B Chain B, Crystal Structure Of Bothropstoxin-I Crystallized At 291k
Length = 121
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 48/129 (37%), Gaps = 34/129 (26%)
Query: 6 SAVQLYSMVSCSTGCDPL-SYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYI 64
S +L M+ TG +P SY YGC CG LG G P D DR
Sbjct: 1 SLFELGKMILQETGKNPAKSYGAYGCNCGVLGRGKPKDATDR-----------------C 43
Query: 65 IFIYSGVVSYTTGAIQGPTVLSFS-NISSPTCGPASEDGPYVVSKASKRGKSCSHRLCEC 123
+++ TG S+S + CG E+ P C LCEC
Sbjct: 44 CYVHKCCYKKLTGCDPKKDRYSYSWKDKTIVCG---ENNP------------CLKELCEC 88
Query: 124 DRRFSECLR 132
D+ + CLR
Sbjct: 89 DKAVAICLR 97
>pdb|2QOG|A Chain A, Crotoxin B, The Basic Pla2 From Crotalus Durissus
Terrificus.
pdb|2QOG|D Chain D, Crotoxin B, The Basic Pla2 From Crotalus Durissus
Terrificus
Length = 122
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 51/133 (38%), Gaps = 42/133 (31%)
Query: 6 SAVQLYSMVSCSTGCDPLS-YKGYGCYCGFLGSGYPVDPIDRTSQLN-----MARDHDSG 59
S +Q M+ T + + Y YGCYCG+ G G P D DR ++ ++
Sbjct: 1 SLLQFNKMIKFETRKNAVPFYAFYGCYCGWGGQGRPKDATDRCCFVHDCCYGKLAKCNTK 60
Query: 60 HEIYIIFIYSGVVSYTTGAIQGPTVLSFSNISSPTCGPASEDGPYVVSKASKRGKSCSHR 119
+IY + SG + TCG +G C +
Sbjct: 61 WDIYRYSLKSGYI---------------------TCG---------------KGTWCKEQ 84
Query: 120 LCECDRRFSECLR 132
+CECDR +ECLR
Sbjct: 85 ICECDRVAAECLR 97
>pdb|1PA0|A Chain A, Crystal Structure Of Bnsp-7, A Lys49-Phospholipase A2
pdb|1PA0|B Chain B, Crystal Structure Of Bnsp-7, A Lys49-Phospholipase A2
Length = 121
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 48/129 (37%), Gaps = 34/129 (26%)
Query: 6 SAVQLYSMVSCSTGCDPL-SYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYI 64
S +L M+ TG +P SY YGC CG LG G P D DR
Sbjct: 1 SLFELGKMILQETGKNPAKSYGAYGCNCGVLGRGQPKDATDR-----------------C 43
Query: 65 IFIYSGVVSYTTGAIQGPTVLSFS-NISSPTCGPASEDGPYVVSKASKRGKSCSHRLCEC 123
+++ TG S+S + CG E+ P C LCEC
Sbjct: 44 CYVHKCCYKKLTGCDPKKDRYSYSWKDKTIVCG---ENNP------------CLKELCEC 88
Query: 124 DRRFSECLR 132
D+ + CLR
Sbjct: 89 DKAVAICLR 97
>pdb|2H8I|A Chain A, Crystal Structure Of The Bothropstoxin-I Complexed With
Polyethylene Glycol
pdb|2H8I|B Chain B, Crystal Structure Of The Bothropstoxin-I Complexed With
Polyethylene Glycol
pdb|3IQ3|A Chain A, Crystal Structure Of Bothropstoxin-I Complexed With
Polietilene Glicol 4000 - Crystallized At 283 K
pdb|3IQ3|B Chain B, Crystal Structure Of Bothropstoxin-I Complexed With
Polietilene Glicol 4000 - Crystallized At 283 K
Length = 121
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 48/129 (37%), Gaps = 34/129 (26%)
Query: 6 SAVQLYSMVSCSTGCDPL-SYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYI 64
S +L M+ TG +P SY YGC CG LG G P D DR
Sbjct: 1 SLFELGKMILQETGKNPAKSYGAYGCNCGVLGRGKPKDATDR-----------------C 43
Query: 65 IFIYSGVVSYTTGAIQGPTVLSFS-NISSPTCGPASEDGPYVVSKASKRGKSCSHRLCEC 123
+++ TG S+S + CG E+ P C LCEC
Sbjct: 44 CYVHKCCYKKLTGCNPKKDRYSYSWKDKTIVCG---ENNP------------CLKELCEC 88
Query: 124 DRRFSECLR 132
D+ + CLR
Sbjct: 89 DKAVAICLR 97
>pdb|2NOT|A Chain A, Notechis Ii-5, Neurotoxic Phospholipase A2 From Notechis
Scutatus Scutatus
pdb|2NOT|B Chain B, Notechis Ii-5, Neurotoxic Phospholipase A2 From Notechis
Scutatus Scutatus
Length = 119
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 8 VQLYSMVSCST-GCDPL-SYKGYGCYCGFLGSGYPVDPIDRTSQLN 51
VQ ++ C+ G P Y YGCYCG+ GSG PVD +DR +++
Sbjct: 3 VQFSYLIQCANHGRRPTRHYMDYGCYCGWGGSGTPVDELDRCCKIH 48
>pdb|2OSH|A Chain A, Crystal Structure Of Natratoxin, A Snake Spla2 That
Blocks A-Type K+ Channel
Length = 119
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 7/47 (14%)
Query: 9 QLYSMVSCS----TGCDPLSYKGYGCYCGFLGSGYPVDPIDRTSQLN 51
Q +M+ C+ + CD + YGCYCG GSG PVD +DR Q++
Sbjct: 4 QFKNMIQCTVPSRSWCD---FADYGCYCGKGGSGTPVDDLDRCCQVH 47
>pdb|4H0S|A Chain A, Crystal Structure Analysis Of A Basic Phospholipase A2
From Trimeresurus Stejnegeri Venom
pdb|4H0S|B Chain B, Crystal Structure Analysis Of A Basic Phospholipase A2
From Trimeresurus Stejnegeri Venom
pdb|4H0S|C Chain C, Crystal Structure Analysis Of A Basic Phospholipase A2
From Trimeresurus Stejnegeri Venom
Length = 137
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 6 SAVQLYSMVSCSTGCDP-LSYKGYGCYCGFLGSGYPVDPID 45
S +QL M+ T +P LSY YGC CG G G PVD D
Sbjct: 17 SLLQLRKMIKKMTNKEPILSYSKYGCNCGMAGRGKPVDATD 57
>pdb|3R0L|D Chain D, Crystal Structure Of Crotoxin
Length = 122
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 43/113 (38%), Gaps = 41/113 (36%)
Query: 25 YKGYGCYCGFLGSGYPVDPIDRTSQLN-----MARDHDSGHEIYIIFIYSGVVSYTTGAI 79
Y YGCYCG+ G G P D DR ++ ++ +IY + SG +
Sbjct: 21 YAFYGCYCGWGGQGRPKDATDRCCFVHDCCYGKLAKCNTKWDIYRYSLKSGYI------- 73
Query: 80 QGPTVLSFSNISSPTCGPASEDGPYVVSKASKRGKSCSHRLCECDRRFSECLR 132
TCG +G C ++CECDR +ECLR
Sbjct: 74 --------------TCG---------------KGTWCEEQICECDRVAAECLR 97
>pdb|3MLM|A Chain A, Crystal Structure Of Bn Iv In Complex With Myristic Acid:
A Lys49 Myotoxic Phospholipase A2 From Bothrops Neuwiedi
Venom
pdb|3MLM|B Chain B, Crystal Structure Of Bn Iv In Complex With Myristic Acid:
A Lys49 Myotoxic Phospholipase A2 From Bothrops Neuwiedi
Venom
Length = 121
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 48/129 (37%), Gaps = 34/129 (26%)
Query: 6 SAVQLYSMVSCSTGCDPL-SYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYI 64
S +L M+ TG +P SY YGC CG LG G P D DR
Sbjct: 1 SLFELGKMILQETGKNPAKSYGAYGCNCGVLGRGGPKDATDR-----------------C 43
Query: 65 IFIYSGVVSYTTGAIQGPTVLSFS-NISSPTCGPASEDGPYVVSKASKRGKSCSHRLCEC 123
+++ TG S+S + CG E+ P C LCEC
Sbjct: 44 CYVHKCCYKKITGCDPKKDRYSYSWKDKTIVCG---ENNP------------CLKELCEC 88
Query: 124 DRRFSECLR 132
D+ + CLR
Sbjct: 89 DKAVAICLR 97
>pdb|1PC9|A Chain A, Crystal Structure Of Bnsp-6, A Lys49-Phospholipase A2
pdb|1PC9|B Chain B, Crystal Structure Of Bnsp-6, A Lys49-Phospholipase A2
Length = 121
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 48/129 (37%), Gaps = 34/129 (26%)
Query: 6 SAVQLYSMVSCSTGCDPL-SYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYI 64
S +L M+ TG +P SY YGC CG LG G P D DR
Sbjct: 1 SLFELGKMILQETGKNPAKSYGAYGCNCGVLGRGGPKDATDR-----------------C 43
Query: 65 IFIYSGVVSYTTGAIQGPTVLSFS-NISSPTCGPASEDGPYVVSKASKRGKSCSHRLCEC 123
+++ TG S+S + CG E+ P C LCEC
Sbjct: 44 CYVHKCCYKKLTGCDPKKDRYSYSWKDKTIVCG---ENNP------------CLKELCEC 88
Query: 124 DRRFSECLR 132
D+ + CLR
Sbjct: 89 DKAVAICLR 97
>pdb|1YXH|A Chain A, Crystal Structure Of A Novel Phospholipase A2 From Naja
Naja Sagittifera With A Strong Anticoagulant Activity
Length = 126
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 9 QLYSMVSCSTGC-DPLSYKGYGCYCGFLGSGYPVDPIDRTSQL 50
Q +M+ C+ + YGCYCG GSG PVD +DR Q+
Sbjct: 11 QFKNMIQCTVPSRSWWDFADYGCYCGRGGSGTPVDDLDRCCQV 53
>pdb|1AE7|A Chain A, Notexin, A Presynaptic Neurotoxic Phospholipase A2
pdb|4E4C|A Chain A, Crystal Structure Of Notexin At 1.8 A Resolution
Length = 119
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 8 VQLYSMVSCST-GCDP-LSYKGYGCYCGFLGSGYPVDPIDRTSQLN 51
VQ ++ C+ G P Y YGCYCG GSG PVD +DR +++
Sbjct: 3 VQFSYLIQCANHGKRPTWHYMDYGCYCGAGGSGTPVDELDRCCKIH 48
>pdb|2WQ5|A Chain A, Non-Antibiotic Properties Of Tetracyclines: Structural
Basis For Inhibition Of Secretory Phospholipase A2
Length = 119
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 7/46 (15%)
Query: 9 QLYSMVSCSTGCDP----LSYKGYGCYCGFLGSGYPVDPIDRTSQL 50
Q +M+ C+ P + YGCYCG GSG PVD +DR Q+
Sbjct: 4 QFKNMIKCTV---PSRSWWDFADYGCYCGRGGSGTPVDDLDRCCQV 46
>pdb|1S6B|A Chain A, X-ray Crystal Structure Of A Complex Formed Between Two
Homologous Isoforms Of Phospholipase A2 From Naja Naja
Sagittifera: Principle Of Molecular Association And
Inactivation
pdb|1XXW|A Chain A, Structure Of Zinc Induced Heterodimer Of Two Calcium
Free Isoforms Of Phospholipase A2 From Naja Naja
Sagittifera At 2.7a Resolution
pdb|2RD4|A Chain A, Design Of Specific Inhibitors Of Phospholipase A2:
Crystal Structure Of The Complex Of Phospholipase A2
With Pentapeptide Leu-Val-Phe-Phe-Ala At 2.9 A
Resolution
Length = 119
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 12/57 (21%)
Query: 9 QLYSMVSCSTGCDP----LSYKGYGCYCGFLGSGYPVDPIDRTSQL-----NMARDH 56
Q +M+ C+ P + YGCYCG GSG P+D +DR Q+ N AR+
Sbjct: 4 QFKNMIQCTV---PKRSWWDFADYGCYCGRGGSGTPIDDLDRCCQVHDNCYNSAREQ 57
>pdb|1LE6|A Chain A, Carboxylic Ester Hydrolase, P 1 21 1 Space Group
pdb|1LE6|B Chain B, Carboxylic Ester Hydrolase, P 1 21 1 Space Group
pdb|1LE6|C Chain C, Carboxylic Ester Hydrolase, P 1 21 1 Space Group
pdb|1LE7|A Chain A, Carboxylic Ester Hydrolase, C 2 2 21 Space Group
pdb|1LE7|B Chain B, Carboxylic Ester Hydrolase, C 2 2 21 Space Group
Length = 123
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 42/124 (33%), Gaps = 28/124 (22%)
Query: 8 VQLYSMVSCSTGCDPLSYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYIIFI 67
++L V C P++Y YGC+CG G G P D ID GH+
Sbjct: 3 LELAGTVGCVGPRTPIAYMKYGCFCGLGGHGQPRDAIDWCCH---------GHDCCYTRA 53
Query: 68 YSGVVSYTTGAIQGPTVLSFSNISSPTCGPASEDGPYVVSKASKRGKSCSHRLCECDRRF 127
S T V S CGPA C LC+CD+
Sbjct: 54 EEAGCSPKTERYSWQCV-----NQSVLCGPAE--------------NKCQELLCKCDQEI 94
Query: 128 SECL 131
+ CL
Sbjct: 95 ANCL 98
>pdb|1Y75|B Chain B, A New Form Of Catalytically Inactive Phospholipase A2 With
An Unusual Disulphide Bridge Cys 32- Cys 49 Reveals
Recognition For N- Acetylglucosmine
Length = 118
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 54/139 (38%), Gaps = 39/139 (28%)
Query: 9 QLYSMVSCSTGC-DPLSYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYIIFI 67
Q +M+ C+ + YGCYCG GSG PVD +DR Q+ HD+ +
Sbjct: 4 QFNNMIQCTVPARSWWDFADYGCYCG-SGSGSPVDDLDRCCQV-----HDNCYN------ 51
Query: 68 YSGVVSYTTGAIQGPTVLSFSNISSPTCGPASEDGPYVVSKA----SKRGKSCSHRLCEC 123
G + G C P S+ Y S+ S +C+ +C+C
Sbjct: 52 -------AGGGVTG-------------CAPKSKTYTYECSQGTLTCSGENSACAATVCDC 91
Query: 124 DRRFSECL--RPYSCPKYK 140
DR + C PY+ Y
Sbjct: 92 DRLAAICFAGAPYNDNNYN 110
>pdb|1POB|A Chain A, Crystal Structure Of Cobra-Venom Phospholipase A2 In A
Complex With A Transition-State Analogue
pdb|1POB|B Chain B, Crystal Structure Of Cobra-Venom Phospholipase A2 In A
Complex With A Transition-State Analogue
pdb|1POA|A Chain A, Interfacial Catalysis: The Mechanism Of Phospholipase A2
Length = 118
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 7/46 (15%)
Query: 9 QLYSMVSCSTGCDP----LSYKGYGCYCGFLGSGYPVDPIDRTSQL 50
Q +M+ C+ P + YGCYCG GSG PVD +DR Q+
Sbjct: 4 QFKNMIQCTV---PSRSWWDFADYGCYCGRGGSGTPVDDLDRCCQV 46
>pdb|1PSH|A Chain A, Crystal Structure Of Phospholipase A2 From Indian Cobra
Reveals A Trimeric Association
pdb|1PSH|B Chain B, Crystal Structure Of Phospholipase A2 From Indian Cobra
Reveals A Trimeric Association
pdb|1PSH|C Chain C, Crystal Structure Of Phospholipase A2 From Indian Cobra
Reveals A Trimeric Association
pdb|1A3F|A Chain A, Phospholipase A2 (Pla2) From Naja Naja Venom
pdb|1A3F|B Chain B, Phospholipase A2 (Pla2) From Naja Naja Venom
pdb|1A3F|C Chain C, Phospholipase A2 (Pla2) From Naja Naja Venom
pdb|1A3D|A Chain A, Phospholipase A2 (Pla2) From Naja Naja Venom
Length = 119
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 7/46 (15%)
Query: 9 QLYSMVSCSTGCDP----LSYKGYGCYCGFLGSGYPVDPIDRTSQL 50
Q +M+ C+ P + YGCYCG GSG PVD +DR Q+
Sbjct: 4 QFKNMIKCTV---PSRSWWDFADYGCYCGRGGSGTPVDDLDRCCQV 46
>pdb|3GCI|A Chain A, Crystal Structure Of The Complex Formed Between A New
Isoform Of Phospholipase A2 With C-Terminal Amyloid
Beta Heptapeptide At 2 A Resolution
Length = 119
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 9 QLYSMVSCSTGCDPLS-YKGYGCYCGFLGSGYPVDPIDRTSQ 49
Q +M+ C+ + + YGCYCG GSG PVD +DR Q
Sbjct: 4 QFKNMIQCTVPSRSWADFADYGCYCGKGGSGTPVDDLDRCCQ 45
>pdb|1OXR|A Chain A, Aspirin Induces Its Anti-inflammatory Effects Through
Its Specific Binding To Phospholipase A2: Crystal
Structure Of The Complex Formed Between Phospholipase
A2 And Aspirin At 1.9a Resolution
pdb|1SZ8|A Chain A, Crystal Structure Of An Acidic Phospholipase A2 From
Naja Naja Sagittifera At 1.5 A Resolution
pdb|1TD7|A Chain A, Interactions Of A Specific Non-steroidal
Anti-inflammatory Drug (nsaid) With Group I
Phospholipase A2 (pla2): Crystal Structure Of The
Complex Formed Between Pla2 And Niflumic Acid At 2.5 A
Resolution
pdb|1YXL|A Chain A, Crystal Structure Of A Novel Phospholipase A2 From Naja
Naja Sagittifera At 1.5 A Resolution
Length = 119
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 9 QLYSMVSCSTGCDPL-SYKGYGCYCGFLGSGYPVDPIDRTSQL 50
Q +M+ C+ + YGCYCG GSG PVD +DR Q+
Sbjct: 4 QFKNMIQCTVPSRSWQDFADYGCYCGKGGSGTPVDDLDRCCQV 46
>pdb|1LN8|A Chain A, Crystal Structure Of A New Isoform Of Phospholipase A2
From Naja Naja Sagittifera At 1.6 A Resolution
pdb|1MF4|A Chain A, Structure-Based Design Of Potent And Selective
Inhibitors Of Phospholipase A2: Crystal Structure Of
The Complex Formed Between Phosholipase A2 From Naja
Naja Sagittifera And A Designed Peptide Inhibitor At
1.9 A Resolution
pdb|3JQ5|A Chain A, Phospholipase A2 Prevents The Aggregation Of Amyloid
Beta Peptides: Crystal Structure Of The Complex Of
Phospholipase A2 With Octapeptide Fragment Of Amyloid
Beta Peptide, Asp- Ala-Glu-Phe-Arg-His-Asp-Ser At 2 A
Resolution
pdb|3JQL|A Chain A, Crystal Structure Of The Complex Formed Between
Phospholipase A2 And A Hexapeptide Fragment Of Amyloid
Beta Peptide, Lys-Leu-Val-Phe-Phe-Ala At 1.2 A
Resolution
pdb|3NJU|A Chain A, Crystal Structure Of The Complex Of Group I
Phospholipase A2 With 4- Methoxy-Benzoicacid At 1.4a
Resolution
pdb|3JTI|A Chain A, Crystal Structure Of The Complex Formed Between
Phospholipase A2 With Beta-Amyloid Fragment,
Lys-Gly-Ala-Ile-Ile-Gly-Leu-Met At 1.8 A Resolution
pdb|3OSH|A Chain A, Crystal Structure Of The Complex Of Group 1
Phospholipase A2 With Atropin At 1.5 A Resolution
pdb|3Q4Y|A Chain A, Crystal Structure Of Group I Phospholipase A2 At 2.3 A
Resolution In 40% Ethanol Revealed The Critical
Elements Of Hydrophobicity Of The Substrate-Binding
Site
Length = 119
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 9 QLYSMVSCSTGCDPLS-YKGYGCYCGFLGSGYPVDPIDRTSQ 49
Q +M+ C+ + + YGCYCG GSG PVD +DR Q
Sbjct: 4 QFKNMIQCTVPSRSWADFADYGCYCGKGGSGTPVDDLDRCCQ 45
>pdb|1T37|A Chain A, Design Of Specific Inhibitors Of Phospholipase A2:
Crystal Structure Of The Complex Formed Between Group I
Phospholipase A2 And A Designed Pentapeptide
Leu-Ala-Ile- Tyr-Ser At 2.6a Resolution
pdb|1ZM6|A Chain A, Crystal Structure Of The Complex Formed Beween A Group I
Phospholipase A2 And Designed Penta Peptide
Leu-ala-ile- Tyr-ser At 2.6a Resolution
Length = 119
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 9 QLYSMVSCSTGCDPLS-YKGYGCYCGFLGSGYPVDPIDRTSQ 49
Q +M+ C+ + + YGCYCG GSG PVD +DR Q
Sbjct: 4 QFKNMIQCTVPSRSWADFADYGCYCGKGGSGTPVDDLDRCCQ 45
>pdb|1VAP|A Chain A, The Monomeric Asp49 Secretory Phospholipase A2 From The
Venom Of Agkistridon Piscivorus Piscivorus
pdb|1VAP|B Chain B, The Monomeric Asp49 Secretory Phospholipase A2 From The
Venom Of Agkistridon Piscivorus Piscivorus
Length = 123
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 40/110 (36%), Gaps = 31/110 (28%)
Query: 23 LSYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYIIFIYSGVVSYTTGAIQGP 82
L Y YGCYCG+ G G P D DR F++ TG
Sbjct: 19 LWYSAYGCYCGWGGQGRPKDATDR-----------------CCFVHDCCYGKVTGCNPKM 61
Query: 83 TVLSFSNISSPTCGPASEDGPYVVSKASKRGKSCSHRLCECDRRFSECLR 132
+ ++S ++G V + C ++CECDR + C R
Sbjct: 62 DIYTYS----------VDNGNIVCGGTN----PCKKQICECDRAAAICFR 97
>pdb|2QHD|A Chain A, Crystal Structure Of Ecarpholin S (Ser49-Pla2) Complexed
With Fatty Acid
pdb|2QHD|B Chain B, Crystal Structure Of Ecarpholin S (Ser49-Pla2) Complexed
With Fatty Acid
pdb|2QHE|A Chain A, Crystal Structure Of Ser49-Pla2 (Ecarpholin S) From Echis
Carinatus Sochureki Snake Venom
pdb|3BJW|A Chain A, Crystal Structure Of Ecarpholin S Complexed With Suramin
pdb|3BJW|B Chain B, Crystal Structure Of Ecarpholin S Complexed With Suramin
pdb|3BJW|C Chain C, Crystal Structure Of Ecarpholin S Complexed With Suramin
pdb|3BJW|D Chain D, Crystal Structure Of Ecarpholin S Complexed With Suramin
pdb|3BJW|E Chain E, Crystal Structure Of Ecarpholin S Complexed With Suramin
pdb|3BJW|F Chain F, Crystal Structure Of Ecarpholin S Complexed With Suramin
pdb|3BJW|G Chain G, Crystal Structure Of Ecarpholin S Complexed With Suramin
pdb|3BJW|H Chain H, Crystal Structure Of Ecarpholin S Complexed With Suramin
Length = 122
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 47/131 (35%), Gaps = 38/131 (29%)
Query: 6 SAVQLYSMVSCSTGCDPL-SYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYI 64
S V+L M+ TG P SY YGC+CG G P+D DR H ++
Sbjct: 1 SVVELGKMIIQETGKSPFPSYTSYGCFCGGGERGPPLDATDRCCLA-----HSCCYD--- 52
Query: 65 IFIYSGVVSYTTGAIQGPTVLSFSNISSPTCGPASEDGPYVVSKAS---KRGKSCSHRLC 121
+ P C P ++ Y + SC R+C
Sbjct: 53 --------------------------TLPDCSPKTDRYKYKRENGEIICENSTSCKKRIC 86
Query: 122 ECDRRFSECLR 132
ECD+ + CLR
Sbjct: 87 ECDKAVAVCLR 97
>pdb|1IJL|A Chain A, Crystal Structure Of Acidic Phospholipase A2 From
Deinagkistrodon Acutus
pdb|1IJL|B Chain B, Crystal Structure Of Acidic Phospholipase A2 From
Deinagkistrodon Acutus
Length = 123
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 40/110 (36%), Gaps = 31/110 (28%)
Query: 23 LSYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYIIFIYSGVVSYTTGAIQGP 82
Y YGCYCG+ G G P D DR F++ TG P
Sbjct: 19 FWYSAYGCYCGWGGHGRPQDATDR-----------------CCFVHDCCYGKVTGC--DP 59
Query: 83 TVLSFSNISSPTCGPASEDGPYVVSKASKRGKSCSHRLCECDRRFSECLR 132
+ S++ + E+G V C +CECDR ++C R
Sbjct: 60 KMDSYTY--------SEENGDIVCGGDD----PCKREICECDRVAADCFR 97
>pdb|1N29|A Chain A, Crystal Structure Of The N1a Mutant Of Human Group Iia
Phospholipase A2
Length = 124
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 8 VQLYSMVSCSTGCDP-LSYKGYGCYCGFLGSGYPVDPIDR 46
V + M+ +TG + LSY YGC+CG G G P D DR
Sbjct: 3 VNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDATDR 42
>pdb|1UMV|X Chain X, Crystal Structure Of An Acidic, Non-Myotoxic Phospholipase
A2 From The Venom Of Bothrops Jararacussu
pdb|1ZL7|A Chain A, Crystal Structure Of Catalytically-Active Phospholipase A2
With Bound Calcium
pdb|1ZLB|A Chain A, Crystal Structure Of Catalytically-Active Phospholipase A2
In The Absence Of Calcium
Length = 122
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 41/110 (37%), Gaps = 31/110 (28%)
Query: 23 LSYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYIIFIYSGVVSYTTGAIQGP 82
L Y YGCYCG G G P D DR F++ TG P
Sbjct: 19 LQYLSYGCYCGLGGQGQPTDATDR-----------------CCFVHDCCYGKVTGC--NP 59
Query: 83 TVLSFSNISSPTCGPASEDGPYVVSKASKRGKSCSHRLCECDRRFSECLR 132
+ S++ + ++G V + C ++CECDR + C R
Sbjct: 60 KIDSYTY--------SKKNGDVVCGGDN----PCKKQICECDRVATTCFR 97
>pdb|1POE|A Chain A, Structures Of Free And Inhibited Human Secretory
Phospholipase A2 From Inflammatory Exudate
pdb|1POE|B Chain B, Structures Of Free And Inhibited Human Secretory
Phospholipase A2 From Inflammatory Exudate
pdb|1AYP|A Chain A, A Probe Molecule Composed Of Seventeen Percent Of Total
Diffracting Matter Gives Correct Solutions In Molecular
Replacement
pdb|1AYP|B Chain B, A Probe Molecule Composed Of Seventeen Percent Of Total
Diffracting Matter Gives Correct Solutions In Molecular
Replacement
pdb|1AYP|C Chain C, A Probe Molecule Composed Of Seventeen Percent Of Total
Diffracting Matter Gives Correct Solutions In Molecular
Replacement
pdb|1AYP|D Chain D, A Probe Molecule Composed Of Seventeen Percent Of Total
Diffracting Matter Gives Correct Solutions In Molecular
Replacement
pdb|1AYP|E Chain E, A Probe Molecule Composed Of Seventeen Percent Of Total
Diffracting Matter Gives Correct Solutions In Molecular
Replacement
pdb|1AYP|F Chain F, A Probe Molecule Composed Of Seventeen Percent Of Total
Diffracting Matter Gives Correct Solutions In Molecular
Replacement
pdb|1KVO|A Chain A, Human Phospholipase A2 Complexed With A Highly Potent
Substrate Anologue
pdb|1KVO|B Chain B, Human Phospholipase A2 Complexed With A Highly Potent
Substrate Anologue
pdb|1KVO|C Chain C, Human Phospholipase A2 Complexed With A Highly Potent
Substrate Anologue
pdb|1KVO|D Chain D, Human Phospholipase A2 Complexed With A Highly Potent
Substrate Anologue
pdb|1KVO|E Chain E, Human Phospholipase A2 Complexed With A Highly Potent
Substrate Anologue
pdb|1KVO|F Chain F, Human Phospholipase A2 Complexed With A Highly Potent
Substrate Anologue
pdb|1DCY|A Chain A, Crystal Structure Of Human S-Pla2 In Complex With Indole
3 Active Site Inhibitor
pdb|1DB4|A Chain A, Human S-Pla2 In Complex With Indole 8
pdb|1DB5|A Chain A, Human S-Pla2 In Complex With Indole 6
pdb|1J1A|A Chain A, Pancreatic Secretory Phospholipase A2 (Iia) With Anti-
Inflammatory Activity
pdb|1J1A|B Chain B, Pancreatic Secretory Phospholipase A2 (Iia) With Anti-
Inflammatory Activity
pdb|1KQU|A Chain A, Human Phospholipase A2 Complexed With A Substrate
Anologue
pdb|1BBC|A Chain A, Structure Of Recombinant Human Rheumatoid Arthritic
Synovial Fluid Phospholipase A2 At 2.2 Angstroms
Resolution
pdb|1POD|A Chain A, Structures Of Free And Inhibited Human Secretory
Phospholipase A2 From Inflammatory Exudate
pdb|3U8B|A Chain A, Functionally Selective Inhibition Of Group Iia
Phospholipase A2 Reveals A Role For Vimentin In
Regulating Arachidonic Acid Metabolism
pdb|3U8D|A Chain A, Functionally Selective Inhibition Of Group Iia
Phospholipase A2 Reveals A Role For Vimentin In
Regulating Arachidonic Acid Metabolism
pdb|3U8D|B Chain B, Functionally Selective Inhibition Of Group Iia
Phospholipase A2 Reveals A Role For Vimentin In
Regulating Arachidonic Acid Metabolism
pdb|3U8H|A Chain A, Functionally Selective Inhibition Of Group Iia
Phospholipase A2 Reveals A Role For Vimentin In
Regulating Arachidonic Acid Metabolism
pdb|3U8H|B Chain B, Functionally Selective Inhibition Of Group Iia
Phospholipase A2 Reveals A Role For Vimentin In
Regulating Arachidonic Acid Metabolism
Length = 124
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 8 VQLYSMVSCSTGCDP-LSYKGYGCYCGFLGSGYPVDPIDR 46
V + M+ +TG + LSY YGC+CG G G P D DR
Sbjct: 3 VNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDATDR 42
>pdb|1N28|B Chain B, Crystal Structure Of The H48q Mutant Of Human Group Iia
Phospholipase A2
pdb|1N28|A Chain A, Crystal Structure Of The H48q Mutant Of Human Group Iia
Phospholipase A2
Length = 124
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 8 VQLYSMVSCSTGCDP-LSYKGYGCYCGFLGSGYPVDPIDR 46
V + M+ +TG + LSY YGC+CG G G P D DR
Sbjct: 3 VNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDATDR 42
>pdb|1MC2|A Chain A, Monomeric Lys-49 Phospholipase A2 Homologue Purified From
Ag
pdb|1MG6|A Chain A, The Crystal Structure Of A K49 Pla2 From The Snake Venom
Of Agkistrodon Acutus
Length = 122
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 47/129 (36%), Gaps = 34/129 (26%)
Query: 6 SAVQLYSMVSCSTGCDPL-SYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYI 64
S +L M+ TG +P+ +Y YGC CG G G P+D DR
Sbjct: 1 SLFELGKMIWQETGKNPVKNYGLYGCNCGVGGRGEPLDATDR-----------------C 43
Query: 65 IFIYSGVVSYTTGAIQGPTVLSFSNISSP-TCGPASEDGPYVVSKASKRGKSCSHRLCEC 123
F++ T S+ + CG + + C +CEC
Sbjct: 44 CFVHKCCYKKLTDCDSKKDRYSYKWKNKAIVCG---------------KNQPCMQEMCEC 88
Query: 124 DRRFSECLR 132
D+ F+ CLR
Sbjct: 89 DKAFAICLR 97
>pdb|3U8I|A Chain A, Functionally Selective Inhibition Of Group Iia
Phospholipase A2 Reveals A Role For Vimentin In
Regulating Arachidonic Acid Metabolism
pdb|3U8I|B Chain B, Functionally Selective Inhibition Of Group Iia
Phospholipase A2 Reveals A Role For Vimentin In
Regulating Arachidonic Acid Metabolism
Length = 124
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 8 VQLYSMVSCSTGCDP-LSYKGYGCYCGFLGSGYPVDPIDR 46
V + M+ +TG + LSY YGC+CG G G P D DR
Sbjct: 3 VNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDATDR 42
>pdb|1MH2|B Chain B, Crystal Structure Of A Zinc Containing Dimer Of
Phospholipase A2 From The Venom Of Indian Cobra (Naja
Naja Sagittifera)
Length = 119
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 7/45 (15%)
Query: 9 QLYSMVSCSTGCDP----LSYKGYGCYCGFLGSGYPVDPIDRTSQ 49
Q +M+SC+ P + YGCYCG GSG P D +DR Q
Sbjct: 4 QFKNMISCTV---PSRSWWDFADYGCYCGRGGSGTPSDDLDRCCQ 45
>pdb|1JIA|A Chain A, Structure Of A Basic Phospholipase A2 From Agkistrodon
Halys Pallas At 2.13a Resolution
pdb|1JIA|B Chain B, Structure Of A Basic Phospholipase A2 From Agkistrodon
Halys Pallas At 2.13a Resolution
pdb|1B4W|A Chain A, Basic Phospholipase A2 From Agkistrodon Halys Pallas-
Implications For Its Association And Anticoagulant
Activities By X-Ray Crystallography
pdb|1B4W|B Chain B, Basic Phospholipase A2 From Agkistrodon Halys Pallas-
Implications For Its Association And Anticoagulant
Activities By X-Ray Crystallography
pdb|1B4W|C Chain C, Basic Phospholipase A2 From Agkistrodon Halys Pallas-
Implications For Its Association And Anticoagulant
Activities By X-Ray Crystallography
pdb|1B4W|D Chain D, Basic Phospholipase A2 From Agkistrodon Halys Pallas-
Implications For Its Association And Anticoagulant
Activities By X-Ray Crystallography
Length = 122
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 8 VQLYSMVSCSTGCDPL-SYKGYGCYCGFLGSGYPVDPIDR 46
+Q M+ TG +P+ SY YGCYCG G G P D DR
Sbjct: 3 LQFRKMIKKMTGKEPVVSYAFYGCYCGSGGRGKPKDATDR 42
>pdb|1U73|A Chain A, Crystal Structure Of A Dimeric Acidic Platelet Aggregation
Inhibitor And Hypotensive Phospholipase A2 From Bothrops
Jararacussu
pdb|1U73|B Chain B, Crystal Structure Of A Dimeric Acidic Platelet Aggregation
Inhibitor And Hypotensive Phospholipase A2 From Bothrops
Jararacussu
pdb|1Z76|A Chain A, Crystal Structure Of An Acidic Phospholipase A2 (Btha-I)
From Bothrops Jararacussu Venom Complexed With P-
Bromophenacyl Bromide
pdb|1Z76|B Chain B, Crystal Structure Of An Acidic Phospholipase A2 (Btha-I)
From Bothrops Jararacussu Venom Complexed With P-
Bromophenacyl Bromide
Length = 122
Score = 35.0 bits (79), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 40/110 (36%), Gaps = 31/110 (28%)
Query: 23 LSYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYIIFIYSGVVSYTTGAIQGP 82
L Y YGCYCG G G P D DR F++ TG P
Sbjct: 19 LQYLSYGCYCGLGGQGQPTDATDR-----------------CCFVHDCCYGKVTGC--DP 59
Query: 83 TVLSFSNISSPTCGPASEDGPYVVSKASKRGKSCSHRLCECDRRFSECLR 132
+ S++ + ++G V C ++CECDR + C R
Sbjct: 60 KIDSYTY--------SKKNGDVVCGGDD----PCKKQICECDRVATTCFR 97
>pdb|4HG9|A Chain A, Crystal Structure Of Ahv_bpa, A Basic Pla2 From
Agkistrodon Halys Pallas Venom
pdb|4HG9|B Chain B, Crystal Structure Of Ahv_bpa, A Basic Pla2 From
Agkistrodon Halys Pallas Venom
pdb|4HG9|C Chain C, Crystal Structure Of Ahv_bpa, A Basic Pla2 From
Agkistrodon Halys Pallas Venom
pdb|4HG9|D Chain D, Crystal Structure Of Ahv_bpa, A Basic Pla2 From
Agkistrodon Halys Pallas Venom
Length = 122
Score = 34.7 bits (78), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 8 VQLYSMVSCSTGCDPL-SYKGYGCYCGFLGSGYPVDPIDR 46
+Q M+ TG +P+ SY YGCYCG G G P D DR
Sbjct: 3 LQFRKMIKKMTGKEPVVSYAFYGCYCGSGGRGKPKDATDR 42
>pdb|1OZ6|A Chain A, X-ray Structure Of Acidic Phospholipase A2 From Indian
Saw- Scaled Viper (echis Carinatus) With A Potent
Platelet Aggregation Inhibitory Activity
Length = 120
Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 9 QLYSMVSCSTGCDP-LSYKGYGCYCGFLGSGYPVDPIDR 46
Q M+ TG P LSY YGCYCG+ G G P D DR
Sbjct: 4 QFGRMIWNRTGKLPILSYGSYGCYCGWGGQGPPKDATDR 42
>pdb|1BUN|A Chain A, Structure Of Beta2-Bungarotoxin: Potassium Channel
Binding By Kunitz Modules And Targeted Phospholipase
Action
Length = 120
Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 16/23 (69%)
Query: 24 SYKGYGCYCGFLGSGYPVDPIDR 46
Y YGCYCG GSG P+D +DR
Sbjct: 21 EYADYGCYCGAGGSGRPIDALDR 43
>pdb|2OQD|A Chain A, Crystal Structure Of Bthtx-Ii
pdb|2OQD|B Chain B, Crystal Structure Of Bthtx-Ii
pdb|3JR8|A Chain A, Crystal Structure Of Bthtx-Ii (Asp49-Pla2 From Bothrops
Jararacussu Snake Venom) With Calcium Ions
pdb|3JR8|B Chain B, Crystal Structure Of Bthtx-Ii (Asp49-Pla2 From Bothrops
Jararacussu Snake Venom) With Calcium Ions
Length = 122
Score = 33.9 bits (76), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 44/125 (35%), Gaps = 32/125 (25%)
Query: 9 QLYSMVSCSTGCDPLSY-KGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYIIFI 67
Q M+ TG P Y YGCYCG+ G G P D DR F+
Sbjct: 4 QFGQMILKETGKLPFPYYTTYGCYCGWGGQGQPKDATDR-----------------CCFV 46
Query: 68 YSGVVSYTTGAIQGPTVLSFSNISSPTCGPASEDGPYVVSKASKRGKSCSHRLCECDRRF 127
+ T S+S E+G + + G C ++CECD+
Sbjct: 47 HDCCYGKLTNCKPKTDRYSYSR----------ENGVIICGE----GTPCEKQICECDKAA 92
Query: 128 SECLR 132
+ C R
Sbjct: 93 AVCFR 97
>pdb|1XXS|A Chain A, Structural Insights For Fatty Acid Binding In A Lys49
Phospholipase A2: Crystal Structure Of Myotoxin Ii From
Bothrops Moojeni Complexed With Stearic Acid
pdb|1XXS|B Chain B, Structural Insights For Fatty Acid Binding In A Lys49
Phospholipase A2: Crystal Structure Of Myotoxin Ii From
Bothrops Moojeni Complexed With Stearic Acid
Length = 122
Score = 33.9 bits (76), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 46/129 (35%), Gaps = 34/129 (26%)
Query: 6 SAVQLYSMVSCSTGCDPL-SYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYI 64
S +L M+ TG +P SY YGC CG G G P D DR
Sbjct: 1 SLFELGKMILQETGKNPAKSYGVYGCNCGVGGRGKPKDATDR-----------------C 43
Query: 65 IFIYSGVVSYTTGAIQGPTVLSFS-NISSPTCGPASEDGPYVVSKASKRGKSCSHRLCEC 123
+++ TG S+S + CG + SC LCEC
Sbjct: 44 CYVHKCCYKKLTGCDPKKDRYSYSWKDKTIVCGENN---------------SCLKELCEC 88
Query: 124 DRRFSECLR 132
D+ + CLR
Sbjct: 89 DKAVAICLR 97
>pdb|2H4C|A Chain A, Structure Of Daboiatoxin (Heterodimeric Pla2 Venom)
pdb|2H4C|C Chain C, Structure Of Daboiatoxin (Heterodimeric Pla2 Venom)
pdb|2H4C|E Chain E, Structure Of Daboiatoxin (Heterodimeric Pla2 Venom)
pdb|2H4C|G Chain G, Structure Of Daboiatoxin (Heterodimeric Pla2 Venom)
Length = 122
Score = 33.9 bits (76), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 9 QLYSMVSCSTGCDPL-SYKGYGCYCGFLGSGYPVDPIDR 46
Q M+ TG + + SY YGCYCG+ G G P D DR
Sbjct: 4 QFAEMIVKMTGKEAVHSYAIYGCYCGWGGQGKPQDATDR 42
>pdb|1Y75|A Chain A, A New Form Of Catalytically Inactive Phospholipase A2
With An Unusual Disulphide Bridge Cys 32- Cys 49
Reveals Recognition For N- Acetylglucosmine
Length = 118
Score = 33.5 bits (75), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 8/46 (17%)
Query: 9 QLYSMVSCSTGCDP----LSYKGYGCYCGFLGSGYPVDPIDRTSQL 50
Q +M+ C+ P + YGCYCG GSG PVD +DR Q+
Sbjct: 4 QFRNMIQCTV---PSRSWWDFADYGCYCG-CGSGTPVDDLDRCCQV 45
>pdb|3DIH|A Chain A, Crystal Structure Of Ammodytin L
Length = 122
Score = 33.5 bits (75), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 6 SAVQLYSMVSCSTGCDPL-SYKGYGCYCGFLGSGYPVDPIDR 46
S ++ M+ T +PL SY YGC+CG G P D DR
Sbjct: 1 SVIEFGKMIQEETDKNPLTSYSFYGCHCGLGNKGKPKDATDR 42
>pdb|2PH4|A Chain A, Crystal Structure Of A Novel Arg49 Phospholipase A2
Homologue From Zhaoermia Mangshanensis Venom
pdb|2PH4|B Chain B, Crystal Structure Of A Novel Arg49 Phospholipase A2
Homologue From Zhaoermia Mangshanensis Venom
Length = 121
Score = 33.5 bits (75), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 47/129 (36%), Gaps = 34/129 (26%)
Query: 6 SAVQLYSMVSCSTGCDPLSYKG-YGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYI 64
S ++L MV TG +P++Y YGC CG G P D DR
Sbjct: 1 SLIELTKMVFQETGKNPVTYYTLYGCNCGVGRRGKPKDATDR-----------------C 43
Query: 65 IFIYSGVVSYTTGAIQGPTVLSFS-NISSPTCGPASEDGPYVVSKASKRGKSCSHRLCEC 123
F++ TG S+S + CG E P C LCEC
Sbjct: 44 CFVHRCCYKKLTGCDPKKDRYSYSWENKAIVCG---EKNP------------CLKELCEC 88
Query: 124 DRRFSECLR 132
D+ + CLR
Sbjct: 89 DKAVAICLR 97
>pdb|1PP2|R Chain R, The Refined Crystal Structure Of Dimeric Phospholipase
A2 At 2.5 Angstroms. Access To A Shielded Catalytic
Center
pdb|1PP2|L Chain L, The Refined Crystal Structure Of Dimeric Phospholipase
A2 At 2.5 Angstroms. Access To A Shielded Catalytic
Center
Length = 122
Score = 33.5 bits (75), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 15/24 (62%)
Query: 23 LSYKGYGCYCGFLGSGYPVDPIDR 46
L Y YGCYCG+ G G P D DR
Sbjct: 19 LWYSAYGCYCGWGGHGLPQDATDR 42
>pdb|1C1J|A Chain A, Structure Of Cadmium-Substituted Phospholipase A2 From
Agkistrondon Halys Pallas At 2.8 Angstroms Resolution
pdb|1C1J|B Chain B, Structure Of Cadmium-Substituted Phospholipase A2 From
Agkistrondon Halys Pallas At 2.8 Angstroms Resolution
pdb|1C1J|C Chain C, Structure Of Cadmium-Substituted Phospholipase A2 From
Agkistrondon Halys Pallas At 2.8 Angstroms Resolution
pdb|1C1J|D Chain D, Structure Of Cadmium-Substituted Phospholipase A2 From
Agkistrondon Halys Pallas At 2.8 Angstroms Resolution
Length = 122
Score = 33.1 bits (74), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 8 VQLYSMVSCSTGCDPL-SYKGYGCYCGFLGSGYPVDPIDR 46
+Q M+ TG +P+ SY YGCYCG G G P + DR
Sbjct: 3 LQFRKMIKKMTGKEPVVSYAFYGCYCGSGGRGKPKNATDR 42
>pdb|1MH2|A Chain A, Crystal Structure Of A Zinc Containing Dimer Of
Phospholipase A2 From The Venom Of Indian Cobra (Naja
Naja Sagittifera)
Length = 119
Score = 32.7 bits (73), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 12/57 (21%)
Query: 9 QLYSMVSCSTGCDP----LSYKGYGCYCGFLGSGYPVDPIDRTSQL-----NMARDH 56
Q +M+ C+ P + YGCYCG GSG P+D +D Q+ N AR+
Sbjct: 4 QFQNMIQCTV---PKRSWRDFADYGCYCGRGGSGTPIDDLDSCCQVHDNCYNSAREQ 57
>pdb|3UX7|A Chain A, Crystal Structure Of A Dimeric Myotoxic Component Of The
Vipera Ammodytes Meridionalis Venom Reveals
Determinants Of Myotoxicity And Membrane Damaging
Activity
pdb|3UX7|B Chain B, Crystal Structure Of A Dimeric Myotoxic Component Of The
Vipera Ammodytes Meridionalis Venom Reveals
Determinants Of Myotoxicity And Membrane Damaging
Activity
pdb|3UX7|C Chain C, Crystal Structure Of A Dimeric Myotoxic Component Of The
Vipera Ammodytes Meridionalis Venom Reveals
Determinants Of Myotoxicity And Membrane Damaging
Activity
pdb|3UX7|D Chain D, Crystal Structure Of A Dimeric Myotoxic Component Of The
Vipera Ammodytes Meridionalis Venom Reveals
Determinants Of Myotoxicity And Membrane Damaging
Activity
pdb|3UX7|E Chain E, Crystal Structure Of A Dimeric Myotoxic Component Of The
Vipera Ammodytes Meridionalis Venom Reveals
Determinants Of Myotoxicity And Membrane Damaging
Activity
pdb|3UX7|F Chain F, Crystal Structure Of A Dimeric Myotoxic Component Of The
Vipera Ammodytes Meridionalis Venom Reveals
Determinants Of Myotoxicity And Membrane Damaging
Activity
pdb|3UX7|G Chain G, Crystal Structure Of A Dimeric Myotoxic Component Of The
Vipera Ammodytes Meridionalis Venom Reveals
Determinants Of Myotoxicity And Membrane Damaging
Activity
pdb|3UX7|H Chain H, Crystal Structure Of A Dimeric Myotoxic Component Of The
Vipera Ammodytes Meridionalis Venom Reveals
Determinants Of Myotoxicity And Membrane Damaging
Activity
Length = 122
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 6 SAVQLYSMVSCSTGCDPL-SYKGYGCYCGFLGSGYPVDPIDR 46
S ++ M+ T +PL SY YGC+CG G P D DR
Sbjct: 1 SVIEFGKMIQEETDKNPLTSYSFYGCHCGLGNGGKPKDATDR 42
>pdb|2I0U|E Chain E, Crystal Structures Of Phospholipases A2 From Vipera
Nikolskii Venom Revealing Triton X-100 Bound In
Hydrophobic Channel
pdb|2I0U|A Chain A, Crystal Structures Of Phospholipases A2 From Vipera
Nikolskii Venom Revealing Triton X-100 Bound In
Hydrophobic Channel
Length = 122
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 23 LSYKGYGCYCGFLGSGYPVDPIDR 46
+Y YGCYCG+ G G P D DR
Sbjct: 19 WNYISYGCYCGWGGQGTPKDATDR 42
>pdb|1JLT|B Chain B, Vipoxin Complex
pdb|1RGB|A Chain A, Phospholipase A2 From Vipera Ammodytes Meridionalis
pdb|1RGB|B Chain B, Phospholipase A2 From Vipera Ammodytes Meridionalis
pdb|1RGB|K Chain K, Phospholipase A2 From Vipera Ammodytes Meridionalis
pdb|1RGB|L Chain L, Phospholipase A2 From Vipera Ammodytes Meridionalis
Length = 122
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 23 LSYKGYGCYCGFLGSGYPVDPIDR 46
+Y YGCYCG+ G G P D DR
Sbjct: 19 WNYISYGCYCGWGGQGTPKDATDR 42
>pdb|1OQS|B Chain B, Crystal Structure Of Rv4RV7 COMPLEX
pdb|1OQS|D Chain D, Crystal Structure Of Rv4RV7 COMPLEX
pdb|1OQS|F Chain F, Crystal Structure Of Rv4RV7 COMPLEX
pdb|1OQS|H Chain H, Crystal Structure Of Rv4RV7 COMPLEX
Length = 122
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 23 LSYKGYGCYCGFLGSGYPVDPIDR 46
+Y YGCYCG+ G G P D DR
Sbjct: 19 WNYISYGCYCGWGGQGTPKDATDR 42
>pdb|1OWS|A Chain A, Crystal Structure Of A C49 Phospholipase A2 From Indian
Cobra Reveals Carbohydrate Binding In The Hydrophobic
Channel
Length = 118
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 8/46 (17%)
Query: 9 QLYSMVSCSTGCDP----LSYKGYGCYCGFLGSGYPVDPIDRTSQL 50
Q +M+ C+ P + YGCYCG GSG P D +DR Q+
Sbjct: 4 QFRNMIECTV---PSRSWWDFADYGCYCG-CGSGTPTDDLDRCCQV 45
>pdb|1OWS|B Chain B, Crystal Structure Of A C49 Phospholipase A2 From Indian
Cobra Reveals Carbohydrate Binding In The Hydrophobic
Channel
Length = 118
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 51/139 (36%), Gaps = 39/139 (28%)
Query: 9 QLYSMVSCSTGC-DPLSYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYIIFI 67
Q +M+ C+ + YGCYCG GSG P D +DR Q HD+ +
Sbjct: 4 QFNNMIECTVPARSWWDFADYGCYCG-SGSGSPTDDLDRCCQT-----HDNCY------- 50
Query: 68 YSGVVSYTTGAIQGPTVLSFSNISSPTCGPASEDGPYVVSKA----SKRGKSCSHRLCEC 123
GA G T C P S Y S+ S +C+ C+C
Sbjct: 51 ---------GAGGGST----------GCAPKSRTYTYQCSQGTLTCSGENSACAATTCDC 91
Query: 124 DRRFSECL--RPYSCPKYK 140
DR + C PY+ Y
Sbjct: 92 DRLAAICFAGAPYNDTNYN 110
>pdb|1AOK|B Chain B, Vipoxin Complex
Length = 122
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 23 LSYKGYGCYCGFLGSGYPVDPIDR 46
+Y YGCYCG+ G G P D DR
Sbjct: 19 WNYISYGCYCGWGGQGTPKDATDR 42
>pdb|2H4C|B Chain B, Structure Of Daboiatoxin (Heterodimeric Pla2 Venom)
pdb|2H4C|D Chain D, Structure Of Daboiatoxin (Heterodimeric Pla2 Venom)
pdb|2H4C|F Chain F, Structure Of Daboiatoxin (Heterodimeric Pla2 Venom)
pdb|2H4C|H Chain H, Structure Of Daboiatoxin (Heterodimeric Pla2 Venom)
Length = 122
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 14/24 (58%)
Query: 23 LSYKGYGCYCGFLGSGYPVDPIDR 46
Y YGCYCG+ G G P D DR
Sbjct: 19 FKYISYGCYCGWGGQGTPKDATDR 42
>pdb|1PPA|A Chain A, The Crystal Structure Of A Lysine 49 Phospholipase A2
From The Venom Of The Cottonmouth Snake At 2.0
Angstroms Resolution
Length = 121
Score = 31.2 bits (69), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 6 SAVQLYSMVSCSTGCDPL-SYKGYGCYCGFLGSGYPVDPIDR 46
S ++L M+ TG + + SY YGC CG+ G P D DR
Sbjct: 1 SVLELGKMILQETGKNAITSYGSYGCNCGWGHRGQPKDATDR 42
>pdb|1Q6V|A Chain A, First Crystal Structure Of A C49 Monomer Pla2 From The
Venom Of Daboia Russelli Pulchella At 1.8 A Resolution
Length = 121
Score = 30.8 bits (68), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 93 PTCGPASEDGPYVVSKAS---KRGKSCSHRLCECDRRFSECLR 132
P C P S+ Y + ++G SC +R+CECD+ + C R
Sbjct: 55 PDCNPKSDRYKYKRVNGAIVCEKGTSCENRICECDKAAAICFR 97
>pdb|2DO2|A Chain A, Design Of Specific Inhibitors Of Phospholipase A2: Crystal
Structure Of The Complex Formed Between A Group Ii Cys
49 Phospholipase A2 And A Designed Pentapeptide
Ala-Leu-Ala- Ser-Lys At 2.6a Resolution
Length = 121
Score = 30.8 bits (68), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 93 PTCGPASEDGPYVVSKAS---KRGKSCSHRLCECDRRFSECLR 132
P C P S+ Y + ++G SC +R+CECD+ + C R
Sbjct: 55 PDCNPKSDRYKYKRVNGAIVCEKGTSCENRICECDKAAAICFR 97
>pdb|1S8G|A Chain A, Crystal Structure Of Lys49-Phospholipase A2 From
Agkistrodon Contortrix Laticinctus, Fatty Acid Bound
Form
pdb|1S8H|A Chain A, Crystal Structure Of Lys49-Phospholipase A2 From
Agkistrodon Contortrix Laticinctus, First Fatty Acid
Free Form
pdb|1S8I|A Chain A, Crystal Structure Of Lys49-Phospholipase A2 From
Agkistrodon Contortrix Laticinctus, Second Fatty Acid
Free Form
Length = 121
Score = 30.8 bits (68), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 6 SAVQLYSMVSCSTGCDPL-SYKGYGCYCGFLGSGYPVDPIDR 46
S ++L M+ TG + + SY YGC CG+ G P D DR
Sbjct: 1 SLLELGKMILQETGKNAITSYGSYGCNCGWGHRGQPKDATDR 42
>pdb|1AOK|A Chain A, Vipoxin Complex
Length = 122
Score = 30.8 bits (68), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 9 QLYSMVSCSTGCDPL-SYKGYGCYCGFLGSGYPVDPIDR 46
Q M+ TG + + SY YGCYCG+ G G D DR
Sbjct: 4 QFGDMILQKTGKEAVHSYAIYGCYCGWGGQGRAQDATDR 42
>pdb|1Q5T|A Chain A, Gln48 Pla2 Separated From Vipoxin From The Venom Of
Vipera Ammodytes Meridionalis.
pdb|1Q5T|B Chain B, Gln48 Pla2 Separated From Vipoxin From The Venom Of
Vipera Ammodytes Meridionalis
Length = 122
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 9 QLYSMVSCSTGCDPL-SYKGYGCYCGFLGSGYPVDPIDR 46
Q M+ TG + + SY YGCYCG+ G G D DR
Sbjct: 4 QFGDMILQKTGKEAVHSYAIYGCYCGWGGQGRAQDATDR 42
>pdb|1VPI|A Chain A, Phospholipase A2 Inhibitor From Vipoxin
Length = 122
Score = 30.4 bits (67), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 9 QLYSMVSCSTGCDPL-SYKGYGCYCGFLGSGYPVDPIDR 46
Q M+ TG + + SY YGCYCG+ G G D DR
Sbjct: 4 QFGDMILQKTGKEAVHSYAIYGCYCGWGGQGRAQDATDR 42
>pdb|1GOD|A Chain A, Monomeric Lys-49 Phospholipase A2 Homologue Isolated
From The Venom Of Cerrophidion (Bothrops) Godmani
Length = 121
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 6 SAVQLYSMVSCSTGCDPL-SYKGYGCYCGFLGSGYPVDPIDR 46
S QL+ M+ TG + + SY YGC CG G P D DR
Sbjct: 1 SMYQLWKMILQETGKNAVPSYGLYGCNCGVGSRGKPKDATDR 42
>pdb|1OQS|A Chain A, Crystal Structure Of Rv4RV7 COMPLEX
pdb|1OQS|C Chain C, Crystal Structure Of Rv4RV7 COMPLEX
pdb|1OQS|E Chain E, Crystal Structure Of Rv4RV7 COMPLEX
pdb|1OQS|G Chain G, Crystal Structure Of Rv4RV7 COMPLEX
Length = 122
Score = 30.0 bits (66), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 14/23 (60%)
Query: 24 SYKGYGCYCGFLGSGYPVDPIDR 46
SY YGCYCG+ G G D DR
Sbjct: 20 SYAIYGCYCGWGGQGRAQDATDR 42
>pdb|2PVT|A Chain A, Crystal Structure Of A New Isoform Of Phospholipase A2
From Russells Viper At 2.1 A Resolution
Length = 121
Score = 29.6 bits (65), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 93 PTCGPASEDGPYVVSKAS---KRGKSCSHRLCECDRRFSECLR 132
P C P S+ Y + + G SC +R+CECD+ + C R
Sbjct: 55 PDCNPKSDRYKYKRVNGAIVCEDGTSCQNRICECDKAAAICFR 97
>pdb|3R0L|A Chain A, Crystal Structure Of Crotoxin
Length = 39
Score = 29.6 bits (65), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 12/19 (63%), Positives = 13/19 (68%)
Query: 28 YGCYCGFLGSGYPVDPIDR 46
YGCYCG G G+P D DR
Sbjct: 3 YGCYCGAGGQGWPQDASDR 21
>pdb|1GMZ|A Chain A, Crystal Structure Of The D49 Phospholipase A2 Piratoxin
Iii From Bothrops Pirajai.
pdb|1GMZ|B Chain B, Crystal Structure Of The D49 Phospholipase A2 Piratoxin
Iii From Bothrops Pirajai
Length = 122
Score = 29.3 bits (64), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 9 QLYSMVSCSTGCDPLSYK-GYGCYCGFLGSGYPVDPIDR 46
Q M+ TG P Y YGCYCG G G P D DR
Sbjct: 4 QFGKMILKETGKLPFPYYVTYGCYCGVGGRGGPKDATDR 42
>pdb|1A2A|A Chain A, Agkistrotoxin, A Phospholipase A2-Type Presynaptic
Neurotoxin From Agkistrodon Halys Pallas
pdb|1A2A|B Chain B, Agkistrotoxin, A Phospholipase A2-Type Presynaptic
Neurotoxin From Agkistrodon Halys Pallas
pdb|1A2A|C Chain C, Agkistrotoxin, A Phospholipase A2-Type Presynaptic
Neurotoxin From Agkistrodon Halys Pallas
pdb|1A2A|D Chain D, Agkistrotoxin, A Phospholipase A2-Type Presynaptic
Neurotoxin From Agkistrodon Halys Pallas
pdb|1A2A|E Chain E, Agkistrotoxin, A Phospholipase A2-Type Presynaptic
Neurotoxin From Agkistrodon Halys Pallas
pdb|1A2A|F Chain F, Agkistrotoxin, A Phospholipase A2-Type Presynaptic
Neurotoxin From Agkistrodon Halys Pallas
pdb|1A2A|G Chain G, Agkistrotoxin, A Phospholipase A2-Type Presynaptic
Neurotoxin From Agkistrodon Halys Pallas
pdb|1A2A|H Chain H, Agkistrotoxin, A Phospholipase A2-Type Presynaptic
Neurotoxin From Agkistrodon Halys Pallas
Length = 122
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 112 RGKSCSHRLCECDRRFSECLR 132
+G +C ++CECDR +EC R
Sbjct: 77 KGTNCEEQICECDRVAAECFR 97
>pdb|4H0Q|A Chain A, Crystal Structure Of A Acidic Pla2 From Trimeresurus
Stejnegeri Venom
pdb|4H0Q|B Chain B, Crystal Structure Of A Acidic Pla2 From Trimeresurus
Stejnegeri Venom
Length = 121
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 23 LSYKGYGCYCGFLGSGYPVDPIDR 46
+ Y YGC+CG G G P D DR
Sbjct: 19 VWYSDYGCFCGKGGHGRPQDATDR 42
>pdb|2AOZ|A Chain A, Crystal Structure Of The Myotoxin-Ii From Atropoides
Nummifer Venom
Length = 121
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 9 QLYSMVSCSTGCDPL-SYKGYGCYCGFLGSGYPVDPIDR 46
QL+ M+ TG + SY YGC CG G P D DR
Sbjct: 4 QLWKMILQETGKNAAPSYGFYGCNCGVGSRGKPKDATDR 42
>pdb|1JLT|A Chain A, Vipoxin Complex
Length = 122
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 9 QLYSMVSCSTGCDPL-SYKGYGCYCGFLGSGYPVDPIDR 46
Q M+ TG + + SY YGCYCG+ G D DR
Sbjct: 4 QFGDMILQKTGKEAVHSYAIYGCYCGWGGQARAQDATDR 42
>pdb|1IO2|A Chain A, Crystal Structure Of Type 2 Ribonuclease H From
Hyperthermophilic Archaeon, Thermococcus Kodakaraensis
Kod1
Length = 213
Score = 26.6 bits (57), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
Query: 6 SAVQLYSMVSCSTGCDPLSYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDH 56
SA + + V+ + L + G +GSGYP DP R N R+H
Sbjct: 142 SAASILAKVTRDRAVEKLKEE-----YGEIGSGYPSDPRTRAFLENYYREH 187
>pdb|2DFH|A Chain A, Crystal Structure Of Tk-Rnase Hii(1-212)-C
Length = 221
Score = 26.6 bits (57), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
Query: 6 SAVQLYSMVSCSTGCDPLSYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDH 56
SA + + V+ + L + G +GSGYP DP R N R+H
Sbjct: 142 SAASILAKVTRDRAVEKLKEE-----YGEIGSGYPSDPRTRAFLENYYREH 187
>pdb|2DFF|A Chain A, Crystal Structure Of Tk-Rnase Hii(1-204)-C
Length = 213
Score = 26.2 bits (56), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
Query: 6 SAVQLYSMVSCSTGCDPLSYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDH 56
SA + + V+ + L + G +GSGYP DP R N R+H
Sbjct: 142 SAASILAKVTRDRAVEKLKEE-----YGEIGSGYPSDPRTRAFLENYYREH 187
>pdb|2DFE|A Chain A, Crystal Structure Of Tk-Rnase Hii(1-200)-C
Length = 209
Score = 26.2 bits (56), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
Query: 6 SAVQLYSMVSCSTGCDPLSYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDH 56
SA + + V+ + L + G +GSGYP DP R N R+H
Sbjct: 142 SAASILAKVTRDRAVEKLKEE-----YGEIGSGYPSDPRTRAFLENYYREH 187
>pdb|2V5Y|A Chain A, Crystal Structure Of The Receptor Protein Tyrosine
Phosphatase Mu Ectodomain
Length = 731
Score = 26.2 bits (56), Expect = 8.1, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Query: 31 YCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYIIFIYSGVVSYTTGAIQGPTVLSFSNI 90
YC GS P+D TS D D+ +EI ++ G TG+ GP + + +
Sbjct: 300 YCTASGSWNDRQPVDSTSYKIGHLDPDTEYEISVLLTRPG--EGGTGS-PGPALRTRTKC 356
Query: 91 SSPTCGP 97
+ P GP
Sbjct: 357 ADPMRGP 363
>pdb|1X1P|A Chain A, Crystal Structure Of Tk-Rnase Hii(1-197)-A(28-42)
Length = 212
Score = 26.2 bits (56), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 33 GFLGSGYPVDPIDRTSQLNMARDH 56
G +GSGYP DP R N R+H
Sbjct: 164 GEIGSGYPSDPRTRAFLENYYREH 187
>pdb|1N4P|B Chain B, Protein Geranylgeranyltransferase Type-I Complexed With
Geranylgeranyl Diphosphate
pdb|1N4P|D Chain D, Protein Geranylgeranyltransferase Type-I Complexed With
Geranylgeranyl Diphosphate
pdb|1N4P|F Chain F, Protein Geranylgeranyltransferase Type-I Complexed With
Geranylgeranyl Diphosphate
pdb|1N4P|H Chain H, Protein Geranylgeranyltransferase Type-I Complexed With
Geranylgeranyl Diphosphate
pdb|1N4P|J Chain J, Protein Geranylgeranyltransferase Type-I Complexed With
Geranylgeranyl Diphosphate
pdb|1N4P|L Chain L, Protein Geranylgeranyltransferase Type-I Complexed With
Geranylgeranyl Diphosphate
pdb|1N4Q|B Chain B, Protein Geranylgeranyltransferase Type-I Complexed With A
Ggpp Analog And A Kkksktkcvil Peptide
pdb|1N4Q|D Chain D, Protein Geranylgeranyltransferase Type-I Complexed With A
Ggpp Analog And A Kkksktkcvil Peptide
pdb|1N4Q|F Chain F, Protein Geranylgeranyltransferase Type-I Complexed With A
Ggpp Analog And A Kkksktkcvil Peptide
pdb|1N4Q|H Chain H, Protein Geranylgeranyltransferase Type-I Complexed With A
Ggpp Analog And A Kkksktkcvil Peptide
pdb|1N4Q|J Chain J, Protein Geranylgeranyltransferase Type-I Complexed With A
Ggpp Analog And A Kkksktkcvil Peptide
pdb|1N4Q|L Chain L, Protein Geranylgeranyltransferase Type-I Complexed With A
Ggpp Analog And A Kkksktkcvil Peptide
pdb|1N4R|B Chain B, Protein Geranylgeranyltransferase Type-I Complexed With A
Geranylgeranylated Kkksktkcvil Peptide Product
pdb|1N4R|D Chain D, Protein Geranylgeranyltransferase Type-I Complexed With A
Geranylgeranylated Kkksktkcvil Peptide Product
pdb|1N4R|F Chain F, Protein Geranylgeranyltransferase Type-I Complexed With A
Geranylgeranylated Kkksktkcvil Peptide Product
pdb|1N4R|H Chain H, Protein Geranylgeranyltransferase Type-I Complexed With A
Geranylgeranylated Kkksktkcvil Peptide Product
pdb|1N4R|J Chain J, Protein Geranylgeranyltransferase Type-I Complexed With A
Geranylgeranylated Kkksktkcvil Peptide Product
pdb|1N4R|L Chain L, Protein Geranylgeranyltransferase Type-I Complexed With A
Geranylgeranylated Kkksktkcvil Peptide Product
pdb|1N4S|B Chain B, Protein Geranylgeranyltransferase Type-I Complexed With
Ggpp And A Geranylgeranylated Kkksktkcvil Peptide
Product
pdb|1N4S|D Chain D, Protein Geranylgeranyltransferase Type-I Complexed With
Ggpp And A Geranylgeranylated Kkksktkcvil Peptide
Product
pdb|1N4S|F Chain F, Protein Geranylgeranyltransferase Type-I Complexed With
Ggpp And A Geranylgeranylated Kkksktkcvil Peptide
Product
pdb|1N4S|H Chain H, Protein Geranylgeranyltransferase Type-I Complexed With
Ggpp And A Geranylgeranylated Kkksktkcvil Peptide
Product
pdb|1N4S|J Chain J, Protein Geranylgeranyltransferase Type-I Complexed With
Ggpp And A Geranylgeranylated Kkksktkcvil Peptide
Product
pdb|1N4S|L Chain L, Protein Geranylgeranyltransferase Type-I Complexed With
Ggpp And A Geranylgeranylated Kkksktkcvil Peptide
Product
pdb|1S64|B Chain B, Rat Protein Geranylgeranyltransferase Type-I Complexed
With L-778,123 And A Sulfate Anion
pdb|1S64|D Chain D, Rat Protein Geranylgeranyltransferase Type-I Complexed
With L-778,123 And A Sulfate Anion
pdb|1S64|F Chain F, Rat Protein Geranylgeranyltransferase Type-I Complexed
With L-778,123 And A Sulfate Anion
pdb|1S64|H Chain H, Rat Protein Geranylgeranyltransferase Type-I Complexed
With L-778,123 And A Sulfate Anion
pdb|1S64|J Chain J, Rat Protein Geranylgeranyltransferase Type-I Complexed
With L-778,123 And A Sulfate Anion
pdb|1S64|L Chain L, Rat Protein Geranylgeranyltransferase Type-I Complexed
With L-778,123 And A Sulfate Anion
pdb|1TNB|B Chain B, Rat Protein Geranylgeranyltransferase Type-I Complexed
With A Ggpp Analog And A Substrate Kksktkcvif Peptide
Derived From Tc21
pdb|1TNB|D Chain D, Rat Protein Geranylgeranyltransferase Type-I Complexed
With A Ggpp Analog And A Substrate Kksktkcvif Peptide
Derived From Tc21
pdb|1TNB|F Chain F, Rat Protein Geranylgeranyltransferase Type-I Complexed
With A Ggpp Analog And A Substrate Kksktkcvif Peptide
Derived From Tc21
pdb|1TNB|H Chain H, Rat Protein Geranylgeranyltransferase Type-I Complexed
With A Ggpp Analog And A Substrate Kksktkcvif Peptide
Derived From Tc21
pdb|1TNB|J Chain J, Rat Protein Geranylgeranyltransferase Type-I Complexed
With A Ggpp Analog And A Substrate Kksktkcvif Peptide
Derived From Tc21
pdb|1TNB|L Chain L, Rat Protein Geranylgeranyltransferase Type-I Complexed
With A Ggpp Analog And A Substrate Kksktkcvif Peptide
Derived From Tc21
pdb|1TNO|B Chain B, Rat Protein Geranylgeranyltransferase Type-I Complexed
With A Ggpp Analog And A Kkksktkcvim Peptide Derived
From K- Ras4b
pdb|1TNO|D Chain D, Rat Protein Geranylgeranyltransferase Type-I Complexed
With A Ggpp Analog And A Kkksktkcvim Peptide Derived
From K- Ras4b
pdb|1TNO|F Chain F, Rat Protein Geranylgeranyltransferase Type-I Complexed
With A Ggpp Analog And A Kkksktkcvim Peptide Derived
From K- Ras4b
pdb|1TNO|H Chain H, Rat Protein Geranylgeranyltransferase Type-I Complexed
With A Ggpp Analog And A Kkksktkcvim Peptide Derived
From K- Ras4b
pdb|1TNO|J Chain J, Rat Protein Geranylgeranyltransferase Type-I Complexed
With A Ggpp Analog And A Kkksktkcvim Peptide Derived
From K- Ras4b
pdb|1TNO|L Chain L, Rat Protein Geranylgeranyltransferase Type-I Complexed
With A Ggpp Analog And A Kkksktkcvim Peptide Derived
From K- Ras4b
pdb|1TNU|B Chain B, Rat Protein Geranylgeranyltransferase Type-I Complexed
With A Ggpp Analog And A Gcincckvl Peptide Derived From
Rhob
pdb|1TNU|D Chain D, Rat Protein Geranylgeranyltransferase Type-I Complexed
With A Ggpp Analog And A Gcincckvl Peptide Derived From
Rhob
pdb|1TNU|F Chain F, Rat Protein Geranylgeranyltransferase Type-I Complexed
With A Ggpp Analog And A Gcincckvl Peptide Derived From
Rhob
pdb|1TNU|H Chain H, Rat Protein Geranylgeranyltransferase Type-I Complexed
With A Ggpp Analog And A Gcincckvl Peptide Derived From
Rhob
pdb|1TNU|J Chain J, Rat Protein Geranylgeranyltransferase Type-I Complexed
With A Ggpp Analog And A Gcincckvl Peptide Derived From
Rhob
pdb|1TNU|L Chain L, Rat Protein Geranylgeranyltransferase Type-I Complexed
With A Ggpp Analog And A Gcincckvl Peptide Derived From
Rhob
pdb|1TNY|B Chain B, Rat Protein Geranylgeranyltransferase Type-I Complexed
With A Ggpp Analog And A Frekkffcail Peptide Derived
From The Heterotrimeric G Protein Gamma-2 Subunit
pdb|1TNY|D Chain D, Rat Protein Geranylgeranyltransferase Type-I Complexed
With A Ggpp Analog And A Frekkffcail Peptide Derived
From The Heterotrimeric G Protein Gamma-2 Subunit
pdb|1TNY|F Chain F, Rat Protein Geranylgeranyltransferase Type-I Complexed
With A Ggpp Analog And A Frekkffcail Peptide Derived
From The Heterotrimeric G Protein Gamma-2 Subunit
pdb|1TNY|H Chain H, Rat Protein Geranylgeranyltransferase Type-I Complexed
With A Ggpp Analog And A Frekkffcail Peptide Derived
From The Heterotrimeric G Protein Gamma-2 Subunit
pdb|1TNY|J Chain J, Rat Protein Geranylgeranyltransferase Type-I Complexed
With A Ggpp Analog And A Frekkffcail Peptide Derived
From The Heterotrimeric G Protein Gamma-2 Subunit
pdb|1TNY|L Chain L, Rat Protein Geranylgeranyltransferase Type-I Complexed
With A Ggpp Analog And A Frekkffcail Peptide Derived
From The Heterotrimeric G Protein Gamma-2 Subunit
pdb|1TNZ|B Chain B, Rat Protein Geranylgeranyltransferase Type-I Complexed
With A Ggpp Analog And A Rrcvll Peptide Derived From
Cdc42 Splice Isoform-2
pdb|1TNZ|D Chain D, Rat Protein Geranylgeranyltransferase Type-I Complexed
With A Ggpp Analog And A Rrcvll Peptide Derived From
Cdc42 Splice Isoform-2
pdb|1TNZ|F Chain F, Rat Protein Geranylgeranyltransferase Type-I Complexed
With A Ggpp Analog And A Rrcvll Peptide Derived From
Cdc42 Splice Isoform-2
pdb|1TNZ|H Chain H, Rat Protein Geranylgeranyltransferase Type-I Complexed
With A Ggpp Analog And A Rrcvll Peptide Derived From
Cdc42 Splice Isoform-2
pdb|1TNZ|J Chain J, Rat Protein Geranylgeranyltransferase Type-I Complexed
With A Ggpp Analog And A Rrcvll Peptide Derived From
Cdc42 Splice Isoform-2
pdb|1TNZ|L Chain L, Rat Protein Geranylgeranyltransferase Type-I Complexed
With A Ggpp Analog And A Rrcvll Peptide Derived From
Cdc42 Splice Isoform-2
Length = 377
Score = 25.8 bits (55), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 32 CGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYIIFIYSGV 71
CGF GS Y P + + A +DSGH I Y+G+
Sbjct: 93 CGFRGSSYLGIPFNPSKNPGTAHPYDSGH---IAMTYTGL 129
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.137 0.437
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,707,109
Number of Sequences: 62578
Number of extensions: 178150
Number of successful extensions: 626
Number of sequences better than 100.0: 139
Number of HSP's better than 100.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 379
Number of HSP's gapped (non-prelim): 247
length of query: 157
length of database: 14,973,337
effective HSP length: 91
effective length of query: 66
effective length of database: 9,278,739
effective search space: 612396774
effective search space used: 612396774
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 47 (22.7 bits)