Query psy12206
Match_columns 164
No_of_seqs 178 out of 1892
Neff 7.9
Searched_HMMs 29240
Date Fri Aug 16 21:33:54 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12206.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12206hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gsl_A Disks large homolog 4; 99.9 8.1E-24 2.8E-28 159.5 16.9 127 38-164 2-163 (196)
2 3r0h_A INAD, inactivation-NO-a 99.9 2.4E-21 8.1E-26 147.7 12.7 122 40-164 17-169 (206)
3 2xkx_A Disks large homolog 4; 99.8 1E-19 3.6E-24 162.0 16.4 127 38-164 56-217 (721)
4 1p1d_A PDZ45, glutamate recept 99.8 8.1E-19 2.8E-23 133.2 14.6 125 39-164 4-168 (196)
5 2xkx_A Disks large homolog 4; 99.8 5.9E-18 2E-22 150.7 15.2 156 5-164 122-364 (721)
6 2qt5_A Glutamate receptor-inte 99.8 1.1E-17 3.7E-22 127.1 13.4 118 41-164 7-168 (200)
7 1w9e_A Syntenin 1; cell adhesi 99.7 4.4E-17 1.5E-21 120.6 13.3 110 41-164 4-139 (166)
8 3suz_A Amyloid beta A4 precurs 99.7 4.6E-17 1.6E-21 135.7 5.3 116 41-164 204-347 (388)
9 2i1n_A Discs, large homolog 3; 99.6 1.4E-14 4.8E-19 98.8 9.6 69 38-106 1-69 (102)
10 3rle_A Golgi reassembly-stacki 99.6 7.1E-15 2.4E-19 112.8 8.4 92 69-162 14-143 (209)
11 2fe5_A Presynaptic protein SAP 99.6 1.8E-14 6.2E-19 96.7 9.2 67 40-106 2-68 (94)
12 2awx_A Synapse associated prot 99.5 5.8E-14 2E-18 96.3 8.8 66 41-106 3-68 (105)
13 4a8c_A Periplasmic PH-dependen 99.5 2.3E-13 7.8E-18 114.9 12.7 93 70-164 262-395 (436)
14 2jik_A Synaptojanin-2 binding 99.5 1.5E-13 5E-18 93.5 9.2 68 39-106 5-72 (101)
15 2byg_A Channel associated prot 99.5 3E-13 1E-17 94.8 9.1 66 41-106 24-89 (117)
16 2q9v_A Membrane-associated gua 99.4 4E-13 1.4E-17 89.4 8.8 61 41-106 2-62 (90)
17 2eno_A Synaptojanin-2-binding 99.4 7.2E-13 2.5E-17 92.9 10.2 68 39-106 15-82 (120)
18 1g9o_A NHE-RF; PDZ domain, com 99.4 3.5E-13 1.2E-17 89.8 8.2 60 40-106 2-61 (91)
19 2d92_A INAD-like protein; PDZ 99.4 2.8E-13 9.4E-18 93.5 7.5 67 39-106 13-79 (108)
20 1wha_A KIAA0147 protein, scrib 99.4 4E-13 1.4E-17 92.1 8.3 69 38-106 4-73 (105)
21 3pv2_A DEGQ; trypsin fold, PDZ 99.4 2.1E-13 7.2E-18 115.6 7.9 92 71-164 282-418 (451)
22 1d5g_A Human phosphatase HPTP1 99.4 9.4E-13 3.2E-17 88.6 9.4 65 40-106 4-68 (96)
23 1i16_A Interleukin 16, LCF; cy 99.4 1.8E-13 6.2E-18 97.6 6.1 67 38-106 26-92 (130)
24 1um1_A KIAA1849 protein, RSGI 99.4 9.2E-13 3.1E-17 90.9 9.5 67 38-106 5-71 (110)
25 1uhp_A Hypothetical protein KI 99.4 1E-12 3.4E-17 90.4 9.6 70 37-106 4-76 (107)
26 1wf8_A Neurabin-I; PDZ domain, 99.4 6.7E-13 2.3E-17 91.3 8.2 68 37-106 5-75 (107)
27 1uep_A Membrane associated gua 99.4 5.8E-13 2E-17 91.0 7.7 65 37-106 5-69 (103)
28 3gge_A PDZ domain-containing p 99.4 1.3E-12 4.4E-17 88.5 9.2 61 39-106 3-63 (95)
29 1ujd_A KIAA0559 protein; PDZ d 99.4 6.7E-13 2.3E-17 92.8 8.0 69 38-106 9-84 (117)
30 3b76_A E3 ubiquitin-protein li 99.4 1.3E-12 4.5E-17 91.8 9.3 64 41-106 24-88 (118)
31 2jil_A GRIP1 protein, glutamat 99.4 9.9E-13 3.4E-17 88.6 8.3 66 40-106 2-67 (97)
32 2h2b_A Tight junction protein 99.4 2.3E-12 7.9E-17 88.4 9.9 68 37-106 3-72 (107)
33 2fne_A Multiple PDZ domain pro 99.4 3.5E-13 1.2E-17 94.5 5.6 65 40-106 24-88 (117)
34 1ueq_A Membrane associated gua 99.4 2.4E-12 8.4E-17 90.7 10.0 65 37-106 15-79 (123)
35 2he4_A Na(+)/H(+) exchange reg 99.4 1.3E-12 4.5E-17 86.9 8.0 60 40-106 3-62 (90)
36 2g5m_B Neurabin-2; spinophilin 99.4 8E-13 2.7E-17 91.6 7.0 66 39-106 2-70 (113)
37 3gsl_A Disks large homolog 4; 99.4 3.8E-12 1.3E-16 95.2 11.3 87 17-106 79-165 (196)
38 2opg_A Multiple PDZ domain pro 99.4 2.4E-12 8.4E-17 86.8 9.2 63 40-106 3-65 (98)
39 2jre_A C60-1 PDZ domain peptid 99.4 2.3E-12 7.9E-17 88.5 9.1 70 37-106 8-79 (108)
40 2qg1_A Multiple PDZ domain pro 99.4 1.9E-12 6.4E-17 86.4 8.4 62 39-106 2-64 (92)
41 2vwr_A Ligand of NUMB protein 99.4 2.5E-12 8.5E-17 86.4 9.1 62 39-106 1-64 (95)
42 1q7x_A PDZ2B domain of PTP-BAS 99.4 2.1E-12 7.2E-17 88.8 8.7 66 39-106 7-77 (108)
43 3cbz_A Dishevelled-2; PDZ doma 99.4 8.3E-13 2.8E-17 91.2 6.6 64 40-106 4-68 (108)
44 2i04_A Membrane-associated gua 99.4 2.1E-12 7E-17 85.0 8.1 59 43-106 2-60 (85)
45 1wi4_A Synip, syntaxin binding 99.4 2.1E-12 7.3E-17 89.3 8.2 65 38-106 12-76 (109)
46 4amh_A Disks large homolog 1; 99.4 1.6E-12 5.3E-17 89.5 7.4 60 47-106 8-67 (106)
47 3axa_A Afadin, nectin-3, prote 99.4 1.6E-12 5.6E-17 89.1 7.5 66 38-106 8-73 (106)
48 3i4w_A Disks large homolog 4; 99.4 2.2E-12 7.4E-17 87.9 7.8 63 38-106 8-70 (104)
49 2w4f_A Protein LAP4; structura 99.4 3.6E-12 1.2E-16 85.8 8.8 66 40-106 2-68 (97)
50 1mfg_A ERB-B2 interacting prot 99.4 5.6E-12 1.9E-16 84.6 9.7 62 42-106 4-68 (95)
51 1x5q_A LAP4 protein; PDZ domai 99.4 6.8E-12 2.3E-16 86.5 10.3 71 35-106 9-80 (110)
52 2r4h_A Membrane-associated gua 99.4 2.7E-12 9.3E-17 89.0 8.2 63 39-106 22-84 (112)
53 1m5z_A GRIP, AMPA receptor int 99.4 5.3E-12 1.8E-16 84.0 9.3 61 39-106 4-66 (91)
54 2daz_A INAD-like protein; PDZ 99.4 3.2E-12 1.1E-16 90.2 8.6 65 38-106 22-86 (124)
55 2dkr_A LIN-7 homolog B; LIN-7B 99.3 2.1E-12 7.2E-17 86.3 7.0 61 41-106 5-65 (93)
56 3egg_C Spinophilin; PP1, serin 99.3 4.3E-12 1.5E-16 94.6 9.3 69 38-106 77-146 (170)
57 2csj_A TJP2 protein; PDZ domai 99.3 2.7E-12 9.4E-17 89.6 7.6 68 37-106 10-79 (117)
58 2v90_A PDZ domain-containing p 99.3 2.1E-12 7.1E-17 86.9 6.7 62 41-106 3-64 (96)
59 2dmz_A INAD-like protein; PDZ 99.3 5.4E-12 1.8E-16 89.4 8.9 72 35-106 9-81 (129)
60 2uzc_A Human pdlim5, PDZ and L 99.3 2.7E-12 9.2E-17 85.0 6.9 59 41-106 3-61 (88)
61 2iwo_A Multiple PDZ domain pro 99.3 9.5E-13 3.2E-17 92.6 4.9 67 38-106 21-88 (120)
62 2ehr_A INAD-like protein; PDZ 99.3 6.4E-12 2.2E-16 87.6 9.1 69 38-106 12-85 (117)
63 1ufx_A KIAA1526 protein; PDZ d 99.3 2.4E-12 8.1E-17 88.3 6.6 62 41-106 6-67 (103)
64 3l4f_D SH3 and multiple ankyri 99.3 5.6E-12 1.9E-16 90.1 8.8 72 34-106 20-99 (132)
65 2kpk_A Membrane-associated gua 99.3 4E-12 1.4E-16 90.3 7.8 67 35-106 12-78 (129)
66 2djt_A Unnamed protein product 99.3 3.2E-12 1.1E-16 87.3 6.8 66 38-106 8-73 (104)
67 1qav_A Alpha-1 syntrophin (res 99.3 3E-12 1E-16 85.1 6.5 61 41-106 4-65 (90)
68 1ihj_A INAD; intermolecular di 99.3 4.3E-12 1.5E-16 85.6 7.3 66 41-106 5-72 (98)
69 1wi2_A Riken cDNA 2700099C19; 99.3 5.5E-12 1.9E-16 86.3 7.9 63 38-106 12-75 (104)
70 2d90_A PDZ domain containing p 99.3 3.5E-12 1.2E-16 86.8 6.8 62 38-106 3-64 (102)
71 2ego_A General receptor for ph 99.3 8.5E-12 2.9E-16 84.0 8.5 65 41-106 4-71 (96)
72 3o46_A Maguk P55 subfamily mem 99.3 6.8E-12 2.3E-16 84.0 8.0 60 41-106 4-63 (93)
73 1uju_A Scribble; PDZ domain, c 99.3 1.7E-12 5.9E-17 89.7 5.1 66 41-106 9-79 (111)
74 1n7e_A AMPA receptor interacti 99.3 9.7E-12 3.3E-16 83.8 8.6 62 40-106 4-65 (97)
75 4e34_A Golgi-associated PDZ an 99.3 3.5E-12 1.2E-16 84.3 6.1 60 41-106 2-63 (87)
76 1rgw_A ZAsp protein; PDZ, cyph 99.3 4.5E-12 1.5E-16 83.3 6.5 58 42-106 2-59 (85)
77 3r68_A Na(+)/H(+) exchange reg 99.3 3.6E-12 1.2E-16 85.5 6.1 60 40-106 4-63 (95)
78 1n7t_A 99-MER peptide of densi 99.3 4.9E-12 1.7E-16 86.2 6.8 66 38-106 8-76 (103)
79 2koj_A Partitioning defective 99.3 1.8E-11 6.1E-16 84.4 9.7 68 37-106 7-74 (111)
80 1r6j_A Syntenin 1; PDZ, membra 99.3 5.7E-12 1.9E-16 83.2 6.7 53 41-106 4-57 (82)
81 2q3g_A PDZ and LIM domain prot 99.3 5.9E-12 2E-16 83.6 6.9 60 40-106 2-61 (89)
82 2jxo_A Ezrin-radixin-moesin-bi 99.3 1.1E-11 3.8E-16 83.6 8.4 60 40-106 8-67 (98)
83 3hpk_A Protein interacting wit 99.3 1.5E-11 5.1E-16 86.7 9.3 64 38-106 16-80 (125)
84 1tp5_A Presynaptic density pro 99.3 7.1E-12 2.4E-16 87.6 7.4 64 37-106 10-73 (119)
85 2f5y_A Regulator of G-protein 99.3 1E-11 3.6E-16 82.8 7.8 56 41-106 3-58 (91)
86 2db5_A INAD-like protein; PDZ 99.3 4.4E-12 1.5E-16 89.8 6.2 65 39-105 23-88 (128)
87 1wfg_A Regulating synaptic mem 99.3 1.3E-11 4.5E-16 88.0 8.6 66 39-106 25-100 (131)
88 2kom_A Partitioning defective 99.3 3.1E-11 1.1E-15 84.8 10.3 70 35-106 24-93 (121)
89 2iwn_A Multiple PDZ domain pro 99.3 1.8E-11 6.2E-16 82.0 8.5 67 39-106 2-68 (97)
90 2vsp_A PDZ domain-containing p 99.3 3.1E-12 1.1E-16 85.3 4.4 59 41-106 3-61 (91)
91 3kzd_A TIAM-1, T-lymphoma inva 99.3 2E-11 6.8E-16 82.6 8.4 62 40-106 5-69 (94)
92 2dls_A PDZ-rhogef, RHO guanine 99.3 2.3E-11 8E-16 81.4 8.6 58 39-106 6-63 (93)
93 2eeg_A PDZ and LIM domain prot 99.3 7.3E-12 2.5E-16 84.0 6.0 61 39-106 6-66 (94)
94 2dc2_A GOPC, golgi associated 99.3 8.8E-12 3E-16 85.2 6.4 60 41-106 9-70 (103)
95 2eei_A PDZ domain-containing p 99.3 4.8E-12 1.6E-16 86.6 5.0 62 38-106 5-66 (106)
96 2pa1_A PDZ and LIM domain prot 99.3 1.4E-11 4.6E-16 81.4 7.0 56 44-106 5-60 (87)
97 2dlu_A INAD-like protein; PDZ 99.3 2.3E-11 8E-16 83.9 8.5 59 41-106 15-73 (111)
98 2o2t_A Multiple PDZ domain pro 99.3 6.2E-12 2.1E-16 87.6 5.5 64 40-105 19-83 (117)
99 1x6d_A Interleukin-16; PDZ dom 99.3 1.6E-11 5.5E-16 85.8 7.5 63 40-106 14-77 (119)
100 1q3o_A Shank1; PDZ, GKAP, pept 99.2 6.1E-11 2.1E-15 81.6 10.1 66 40-106 6-79 (109)
101 1uew_A Membrane associated gua 99.2 3.7E-11 1.3E-15 83.4 9.0 69 37-106 6-78 (114)
102 3nfk_A Tyrosine-protein phosph 99.2 1.3E-11 4.4E-16 84.6 6.5 62 40-106 16-79 (107)
103 1ky9_A Protease DO, DEGP, HTRA 99.2 1.8E-12 6.3E-17 109.7 2.6 92 71-164 286-415 (448)
104 2eeh_A PDZ domain-containing p 99.2 3.2E-11 1.1E-15 81.7 8.3 63 38-106 7-70 (100)
105 2cs5_A Tyrosine-protein phosph 99.2 1.5E-11 5.1E-16 85.9 6.7 62 39-106 13-77 (119)
106 2la8_A Inactivation-NO-after-p 99.2 1.6E-11 5.5E-16 84.5 6.7 59 40-106 1-60 (106)
107 3qe1_A Sorting nexin-27, G pro 99.2 3.4E-11 1.2E-15 82.5 8.3 66 40-106 5-77 (107)
108 2kv8_A RGS12, regulator of G-p 99.2 5.1E-12 1.7E-16 82.8 3.8 56 41-106 2-57 (83)
109 1wfv_A Membrane associated gua 99.2 5.3E-12 1.8E-16 85.8 3.8 64 38-106 8-71 (103)
110 2pkt_A PDZ and LIM domain prot 99.2 2.3E-11 8E-16 80.9 6.9 59 41-106 3-61 (91)
111 1kwa_A Hcask/LIN-2 protein; PD 99.2 3.1E-11 1.1E-15 80.2 7.4 57 42-106 2-60 (88)
112 2ejy_A 55 kDa erythrocyte memb 99.2 3.3E-11 1.1E-15 81.9 7.6 58 42-106 13-71 (97)
113 1wf7_A Enigma homologue protei 99.2 9.7E-12 3.3E-16 84.8 4.9 60 40-106 4-63 (103)
114 3bpu_A Membrane-associated gua 99.2 4E-11 1.4E-15 79.3 7.7 57 41-106 3-59 (88)
115 1wg6_A Hypothetical protein (r 99.2 6.6E-12 2.3E-16 89.1 3.8 65 41-106 25-90 (127)
116 2qkv_A Inactivation-NO-after-p 99.2 2.8E-11 9.5E-16 81.6 6.7 61 38-106 5-66 (96)
117 2gzv_A PRKCA-binding protein; 99.2 5.7E-11 1.9E-15 82.7 8.2 61 41-106 24-85 (114)
118 1um7_A Synapse-associated prot 99.2 1.6E-11 5.4E-16 84.8 5.1 65 36-106 10-74 (113)
119 2dm8_A INAD-like protein; PDZ 99.2 1.5E-11 5.1E-16 85.5 5.0 62 41-106 17-78 (116)
120 1v5q_A GRIP1 homolog, glutamat 99.2 9.7E-11 3.3E-15 82.3 9.0 68 38-106 12-80 (122)
121 1uez_A KIAA1526 protein; PDZ d 99.2 4.3E-11 1.5E-15 81.2 6.6 61 40-106 7-69 (101)
122 1v62_A KIAA1719 protein; struc 99.2 4.5E-11 1.5E-15 83.5 6.9 63 40-106 14-77 (117)
123 2kjd_A Sodium/hydrogen exchang 99.2 9.6E-11 3.3E-15 82.7 8.3 61 39-106 7-67 (128)
124 1x5n_A Harmonin; PDZ domain, u 99.2 1.4E-10 4.9E-15 80.2 8.6 62 39-106 13-75 (114)
125 2vsv_A Rhophilin-2; scaffold p 99.2 5E-11 1.7E-15 82.6 6.1 56 41-106 23-78 (109)
126 3ngh_A PDZ domain-containing p 99.2 7.6E-11 2.6E-15 80.6 6.9 58 42-106 2-60 (106)
127 1uit_A Human discs large 5 pro 99.2 1.1E-10 3.8E-15 81.3 7.8 58 41-106 19-76 (117)
128 1va8_A Maguk P55 subfamily mem 99.2 1.2E-10 4.2E-15 80.7 7.9 58 40-106 24-83 (113)
129 2edp_A Fragment, shroom family 99.2 3.1E-11 1.1E-15 82.0 4.8 63 37-106 7-70 (100)
130 1z87_A Alpha-1-syntrophin; pro 99.1 4.9E-11 1.7E-15 94.6 6.1 63 38-106 74-138 (263)
131 1v6b_A Harmonin isoform A1; st 99.1 1.5E-10 5E-15 81.0 7.5 61 41-106 18-78 (118)
132 1wif_A RSGI RUH-020, riken cDN 99.1 3.7E-11 1.3E-15 85.4 4.5 58 40-105 26-83 (126)
133 1nf3_C PAR-6B; semi-CRIB motif 99.1 3.9E-11 1.3E-15 85.1 4.5 69 38-106 26-100 (128)
134 2iwq_A Multiple PDZ domain pro 99.1 2E-10 6.9E-15 81.0 8.0 66 41-106 24-94 (123)
135 3r0h_A INAD, inactivation-NO-a 99.1 2.1E-10 7.2E-15 86.7 8.6 79 17-106 91-171 (206)
136 2fcf_A Multiple PDZ domain pro 99.1 2E-10 6.8E-15 78.0 7.6 66 41-106 4-74 (103)
137 3sfj_A TAX1-binding protein 3; 99.1 1.9E-10 6.4E-15 78.2 7.5 62 44-106 7-79 (104)
138 2yt7_A Amyloid beta A4 precurs 99.1 4.3E-10 1.5E-14 76.3 9.1 64 40-106 8-72 (101)
139 3khf_A Microtubule-associated 99.1 1.2E-10 4.1E-15 78.6 5.9 61 45-106 6-68 (99)
140 3k1r_A Harmonin; protein-prote 99.1 1.3E-10 4.6E-15 87.7 6.8 62 39-106 82-144 (192)
141 2qt5_A Glutamate receptor-inte 99.1 6E-10 2E-14 84.1 10.3 88 17-105 77-169 (200)
142 2e7k_A Maguk P55 subfamily mem 99.1 1.1E-10 3.8E-15 78.0 4.9 56 41-104 6-62 (91)
143 2d8i_A T-cell lymphoma invasio 99.1 1.2E-10 4E-15 81.3 5.0 62 40-106 14-78 (114)
144 3tsz_A Tight junction protein 99.1 8.8E-10 3E-14 91.8 11.0 112 41-161 9-136 (391)
145 2yuy_A RHO GTPase activating p 99.1 3.3E-11 1.1E-15 85.2 1.9 66 40-106 7-95 (126)
146 2vz5_A TAX1-binding protein 3; 99.1 3.5E-10 1.2E-14 81.4 7.3 67 39-106 21-98 (139)
147 2lob_A Golgi-associated PDZ an 98.6 1.4E-11 4.9E-16 85.6 0.0 60 41-106 27-88 (112)
148 1uf1_A KIAA1526 protein; PDZ d 99.1 4E-10 1.4E-14 79.6 7.5 74 20-106 6-80 (128)
149 1qau_A Neuronal nitric oxide s 99.1 6.3E-10 2.1E-14 76.7 8.3 58 42-106 2-61 (112)
150 1whd_A RGS3, regulator of G-pr 99.1 1.2E-10 4.2E-15 79.0 4.5 59 38-106 12-70 (100)
151 3soe_A Membrane-associated gua 99.1 6.1E-10 2.1E-14 77.6 8.1 56 40-106 11-66 (113)
152 3shw_A Tight junction protein 99.1 8.3E-10 2.8E-14 93.9 10.5 111 42-161 2-128 (468)
153 1vb7_A PDZ and LIM domain 2; P 99.0 1.2E-10 4E-15 78.1 3.9 52 49-106 13-64 (94)
154 2z17_A Pleckstrin homology SEC 99.0 3.7E-10 1.3E-14 76.9 6.3 65 41-106 15-82 (104)
155 2edz_A PDZ domain-containing p 99.0 5.8E-10 2E-14 77.3 6.8 59 41-106 13-72 (114)
156 3e17_A Tight junction protein 99.0 1E-09 3.5E-14 72.7 7.6 51 45-106 4-56 (88)
157 2qbw_A PDZ-fibronectin fusion 99.0 8E-10 2.7E-14 83.0 7.9 53 52-106 2-57 (195)
158 2eaq_A LIM domain only protein 99.0 2.2E-09 7.4E-14 71.0 8.5 56 41-105 3-61 (90)
159 3tsv_A Tight junction protein 99.0 1.4E-09 4.8E-14 76.7 7.8 50 49-106 36-85 (124)
160 1ujv_A Membrane associated gua 99.0 2.8E-09 9.4E-14 71.8 8.5 58 38-106 7-64 (96)
161 1v5l_A PDZ and LIM domain 3; a 99.0 1.4E-10 4.8E-15 79.0 1.8 57 43-106 7-63 (103)
162 2edv_A FERM and PDZ domain-con 98.9 3.5E-10 1.2E-14 76.2 3.2 56 40-106 7-64 (96)
163 3qik_A Phosphatidylinositol 3, 98.9 1.9E-09 6.4E-14 73.6 6.6 55 42-105 18-72 (101)
164 4amh_A Disks large homolog 1; 98.9 2.1E-09 7.3E-14 73.6 6.8 49 116-164 17-65 (106)
165 2krg_A Na(+)/H(+) exchange reg 98.9 1E-09 3.6E-14 84.6 5.4 61 39-106 7-67 (216)
166 1y7n_A Amyloid beta A4 precurs 98.9 5E-09 1.7E-13 69.9 8.0 52 42-106 14-65 (90)
167 1wh1_A KIAA1095 protein; PDZ d 98.9 2.1E-09 7.3E-14 75.5 6.4 66 38-106 16-83 (124)
168 4fln_A Protease DO-like 2, chl 98.9 1.1E-08 3.7E-13 88.4 12.0 92 70-164 276-447 (539)
169 1vae_A Rhophilin 2, rhophilin, 98.9 2.8E-10 9.7E-15 78.9 1.6 54 42-105 16-69 (111)
170 1b8q_A Protein (neuronal nitri 98.9 9.9E-10 3.4E-14 77.4 3.6 59 41-106 8-68 (127)
171 2fe5_A Presynaptic protein SAP 98.8 8.6E-09 2.9E-13 68.6 6.7 37 128-164 30-66 (94)
172 2awx_A Synapse associated prot 98.8 1.2E-08 4E-13 69.5 6.7 35 130-164 32-66 (105)
173 2i1n_A Discs, large homolog 3; 98.8 1.5E-08 5E-13 68.5 7.1 36 129-164 32-67 (102)
174 1g9o_A NHE-RF; PDZ domain, com 98.8 9.9E-09 3.4E-13 67.9 6.0 51 113-164 7-59 (91)
175 3cyy_A Tight junction protein 98.8 2.5E-08 8.4E-13 66.0 7.5 53 42-105 3-57 (92)
176 2byg_A Channel associated prot 98.8 1.8E-08 6E-13 70.2 6.8 36 129-164 52-87 (117)
177 2la8_A Inactivation-NO-after-p 98.7 8.6E-09 2.9E-13 70.7 4.8 45 120-164 14-58 (106)
178 3o46_A Maguk P55 subfamily mem 98.7 1.7E-08 5.9E-13 67.1 6.2 44 121-164 16-61 (93)
179 3r68_A Na(+)/H(+) exchange reg 98.7 7.7E-09 2.6E-13 68.9 4.5 51 113-164 9-61 (95)
180 2he4_A Na(+)/H(+) exchange reg 98.7 1.6E-08 5.5E-13 66.8 5.8 51 113-164 8-60 (90)
181 2jik_A Synaptojanin-2 binding 98.7 2.5E-08 8.5E-13 67.3 6.8 35 130-164 36-70 (101)
182 2q9v_A Membrane-associated gua 98.7 1.8E-08 6.3E-13 66.5 6.0 34 131-164 27-60 (90)
183 1p1d_A PDZ45, glutamate recept 98.7 7.8E-08 2.7E-12 72.3 9.9 82 22-106 87-170 (196)
184 2opg_A Multiple PDZ domain pro 98.7 2.2E-08 7.5E-13 67.1 6.0 34 131-164 30-63 (98)
185 3i4w_A Disks large homolog 4; 98.7 1.7E-08 5.8E-13 68.3 5.4 52 113-164 15-68 (104)
186 1n7e_A AMPA receptor interacti 98.7 3E-08 1E-12 66.5 6.2 44 121-164 17-63 (97)
187 2qkv_A Inactivation-NO-after-p 98.7 8.9E-09 3E-13 69.1 3.4 44 121-164 21-64 (96)
188 2i04_A Membrane-associated gua 98.7 3.2E-08 1.1E-12 64.6 6.0 35 130-164 24-58 (85)
189 2vwr_A Ligand of NUMB protein 98.7 2.9E-08 1E-12 66.2 5.8 35 130-164 28-62 (95)
190 1uep_A Membrane associated gua 98.7 3.2E-08 1.1E-12 67.1 6.0 35 130-164 33-67 (103)
191 3gge_A PDZ domain-containing p 98.7 4.3E-08 1.5E-12 66.1 6.5 52 113-164 9-61 (95)
192 3qik_A Phosphatidylinositol 3, 98.7 1.4E-08 5E-13 69.2 4.1 45 119-164 27-71 (101)
193 2yub_A LIMK-2, LIM domain kina 98.7 4.2E-08 1.4E-12 68.6 6.5 63 41-106 15-80 (118)
194 2d92_A INAD-like protein; PDZ 98.7 1.8E-08 6.1E-13 69.0 4.6 35 130-164 43-77 (108)
195 2vsp_A PDZ domain-containing p 98.7 2.6E-08 8.8E-13 66.0 5.2 51 113-164 7-59 (91)
196 2f5y_A Regulator of G-protein 98.7 3.7E-08 1.3E-12 65.3 6.0 44 119-164 13-56 (91)
197 2qg1_A Multiple PDZ domain pro 98.7 3E-08 1E-12 65.7 5.5 35 130-164 28-62 (92)
198 2eno_A Synaptojanin-2-binding 98.7 5.8E-08 2E-12 67.6 7.2 35 130-164 46-80 (120)
199 2jxo_A Ezrin-radixin-moesin-bi 98.7 4.2E-08 1.4E-12 65.8 6.2 43 121-164 21-65 (98)
200 1ujd_A KIAA0559 protein; PDZ d 98.7 2E-08 7E-13 69.8 4.7 34 131-164 49-82 (117)
201 2jil_A GRIP1 protein, glutamat 98.7 2.1E-08 7E-13 67.1 4.5 35 130-164 31-65 (97)
202 2w4f_A Protein LAP4; structura 98.7 3.5E-08 1.2E-12 65.9 5.6 34 130-164 33-66 (97)
203 2jre_A C60-1 PDZ domain peptid 98.7 5.4E-08 1.9E-12 66.4 6.5 35 130-164 43-77 (108)
204 1d5g_A Human phosphatase HPTP1 98.7 5.9E-08 2E-12 64.7 6.5 35 130-164 32-66 (96)
205 1wf8_A Neurabin-I; PDZ domain, 98.6 1.9E-08 6.4E-13 68.7 4.0 35 130-164 39-73 (107)
206 2g5m_B Neurabin-2; spinophilin 98.6 1.7E-08 6E-13 69.5 3.9 35 130-164 34-68 (113)
207 3b76_A E3 ubiquitin-protein li 98.6 5.3E-08 1.8E-12 68.0 6.4 35 130-164 52-86 (118)
208 3cbz_A Dishevelled-2; PDZ doma 98.6 3.3E-08 1.1E-12 67.8 5.3 35 130-164 32-66 (108)
209 2eaq_A LIM domain only protein 98.6 2.1E-08 7.2E-13 66.2 4.2 42 122-164 19-60 (90)
210 2rcz_A Tight junction protein 98.6 1.2E-07 4.1E-12 60.9 7.7 43 52-105 13-55 (81)
211 3e17_A Tight junction protein 98.6 2.9E-08 9.9E-13 65.6 4.8 34 131-164 21-54 (88)
212 2kv8_A RGS12, regulator of G-p 98.6 2.3E-08 7.9E-13 65.1 4.1 49 114-164 7-55 (83)
213 1wha_A KIAA0147 protein, scrib 98.6 3.8E-08 1.3E-12 66.9 5.1 35 130-164 37-71 (105)
214 1q7x_A PDZ2B domain of PTP-BAS 98.6 5.5E-08 1.9E-12 66.4 5.9 35 130-164 41-75 (108)
215 2dkr_A LIN-7 homolog B; LIN-7B 98.6 5.6E-08 1.9E-12 64.4 5.8 52 113-164 9-63 (93)
216 1va8_A Maguk P55 subfamily mem 98.6 5.5E-08 1.9E-12 67.1 6.0 51 113-164 29-81 (113)
217 3qe1_A Sorting nexin-27, G pro 98.6 7E-08 2.4E-12 65.7 6.4 33 131-164 43-75 (107)
218 1kwa_A Hcask/LIN-2 protein; PD 98.6 5.3E-08 1.8E-12 64.3 5.5 44 120-164 13-58 (88)
219 2fne_A Multiple PDZ domain pro 98.6 2.3E-08 7.7E-13 69.7 3.8 34 131-164 53-86 (117)
220 1um1_A KIAA1849 protein, RSGI 98.6 4.6E-08 1.6E-12 67.0 5.3 35 130-164 35-69 (110)
221 2e7k_A Maguk P55 subfamily mem 98.6 4.9E-08 1.7E-12 64.9 5.0 44 121-164 19-62 (91)
222 2dls_A PDZ-rhogef, RHO guanine 98.6 6.2E-08 2.1E-12 64.5 5.6 44 119-164 18-61 (93)
223 3axa_A Afadin, nectin-3, prote 98.6 6.1E-08 2.1E-12 66.0 5.6 35 130-164 37-71 (106)
224 1rgw_A ZAsp protein; PDZ, cyph 98.6 4.8E-08 1.6E-12 63.7 4.9 33 131-164 25-57 (85)
225 1w9e_A Syntenin 1; cell adhesi 98.6 1.6E-07 5.6E-12 68.8 8.2 72 15-106 69-141 (166)
226 1q3o_A Shank1; PDZ, GKAP, pept 98.6 4.9E-08 1.7E-12 66.8 5.1 32 132-164 46-77 (109)
227 2eei_A PDZ domain-containing p 98.6 4.1E-08 1.4E-12 66.8 4.6 51 113-164 12-64 (106)
228 2d90_A PDZ domain containing p 98.6 4.2E-08 1.5E-12 66.3 4.7 51 113-164 10-62 (102)
229 2ejy_A 55 kDa erythrocyte memb 98.6 4.2E-08 1.4E-12 66.3 4.6 35 130-164 35-69 (97)
230 3ngh_A PDZ domain-containing p 98.6 3.8E-08 1.3E-12 66.9 4.4 35 129-164 24-58 (106)
231 2dlu_A INAD-like protein; PDZ 98.6 6E-08 2.1E-12 66.5 5.4 44 121-164 27-71 (111)
232 2koj_A Partitioning defective 98.6 7.6E-08 2.6E-12 65.9 5.8 34 131-164 39-72 (111)
233 2v90_A PDZ domain-containing p 98.6 3.6E-08 1.2E-12 65.9 4.1 33 131-164 30-62 (96)
234 1m5z_A GRIP, AMPA receptor int 98.6 6.4E-08 2.2E-12 63.9 5.2 34 130-164 31-64 (91)
235 1r6j_A Syntenin 1; PDZ, membra 98.6 4.7E-08 1.6E-12 64.2 4.4 47 113-164 8-55 (82)
236 2vsv_A Rhophilin-2; scaffold p 98.6 7.2E-08 2.5E-12 66.5 5.6 50 113-164 27-76 (109)
237 1wi2_A Riken cDNA 2700099C19; 98.6 9.2E-08 3.2E-12 64.9 6.0 33 131-164 41-73 (104)
238 2r4h_A Membrane-associated gua 98.6 9.9E-08 3.4E-12 65.7 6.2 35 130-164 48-82 (112)
239 1mfg_A ERB-B2 interacting prot 98.6 1.2E-07 4.3E-12 63.1 6.5 34 129-164 33-66 (95)
240 1uit_A Human discs large 5 pro 98.6 6.5E-08 2.2E-12 67.0 5.2 34 130-164 41-74 (117)
241 1tp5_A Presynaptic density pro 98.6 6.1E-08 2.1E-12 67.3 5.1 52 113-164 18-71 (119)
242 3egg_C Spinophilin; PP1, serin 98.6 5.8E-08 2E-12 72.1 5.2 35 130-164 110-144 (170)
243 1x5q_A LAP4 protein; PDZ domai 98.6 1.1E-07 3.9E-12 65.0 6.3 35 129-164 44-78 (110)
244 3l4f_D SH3 and multiple ankyri 98.6 3.8E-08 1.3E-12 70.0 4.0 33 131-164 65-97 (132)
245 2djt_A Unnamed protein product 98.6 8.4E-08 2.9E-12 64.9 5.5 35 130-164 37-71 (104)
246 2iwn_A Multiple PDZ domain pro 98.6 1.4E-07 4.9E-12 62.7 6.6 35 130-164 32-66 (97)
247 2daz_A INAD-like protein; PDZ 98.6 6.9E-08 2.4E-12 67.7 5.1 35 130-164 50-84 (124)
248 2pkt_A PDZ and LIM domain prot 98.6 6.8E-08 2.3E-12 63.9 4.7 33 131-164 27-59 (91)
249 2q3g_A PDZ and LIM domain prot 98.6 5.9E-08 2E-12 63.9 4.4 33 131-164 27-59 (89)
250 2eeh_A PDZ domain-containing p 98.6 9.6E-08 3.3E-12 64.3 5.5 33 131-164 36-68 (100)
251 2pa1_A PDZ and LIM domain prot 98.6 6.7E-08 2.3E-12 63.4 4.6 33 131-164 26-58 (87)
252 2dm8_A INAD-like protein; PDZ 98.6 8.1E-08 2.8E-12 66.3 5.3 45 120-164 28-76 (116)
253 1wi4_A Synip, syntaxin binding 98.6 7.7E-08 2.6E-12 66.1 5.1 34 131-164 41-74 (109)
254 1uhp_A Hypothetical protein KI 98.6 1.8E-07 6E-12 63.8 6.9 34 130-164 40-74 (107)
255 3sfj_A TAX1-binding protein 3; 98.6 1.1E-07 3.7E-12 64.3 5.7 35 129-164 43-77 (104)
256 3kzd_A TIAM-1, T-lymphoma inva 98.6 7.2E-08 2.5E-12 64.9 4.8 33 131-164 35-67 (94)
257 2kom_A Partitioning defective 98.5 1.6E-07 5.3E-12 65.7 6.5 34 131-164 58-91 (121)
258 2uzc_A Human pdlim5, PDZ and L 98.5 8.5E-08 2.9E-12 62.9 4.7 33 131-164 27-59 (88)
259 3tsv_A Tight junction protein 98.5 1.2E-07 4.1E-12 66.7 5.8 43 121-164 40-83 (124)
260 1whd_A RGS3, regulator of G-pr 98.5 8.5E-08 2.9E-12 64.7 4.6 44 119-164 25-68 (100)
261 1uez_A KIAA1526 protein; PDZ d 98.5 8.1E-08 2.8E-12 64.8 4.4 34 130-164 34-67 (101)
262 2ehr_A INAD-like protein; PDZ 98.5 1.6E-07 5.3E-12 65.1 6.0 35 130-164 49-83 (117)
263 2eeg_A PDZ and LIM domain prot 98.5 8.9E-08 3.1E-12 63.8 4.5 34 130-164 31-64 (94)
264 1ueq_A Membrane associated gua 98.5 2E-07 6.8E-12 65.2 6.4 35 130-164 43-77 (123)
265 3hpk_A Protein interacting wit 98.5 1.9E-07 6.6E-12 65.4 6.3 34 131-164 45-78 (125)
266 1ufx_A KIAA1526 protein; PDZ d 98.5 9E-08 3.1E-12 65.2 4.4 33 132-164 33-65 (103)
267 2ego_A General receptor for ph 98.5 1.2E-07 4E-12 63.4 4.8 33 131-164 37-69 (96)
268 1wif_A RSGI RUH-020, riken cDN 98.5 3.9E-08 1.3E-12 69.6 2.5 49 116-164 34-82 (126)
269 2fcf_A Multiple PDZ domain pro 98.5 1.4E-07 4.7E-12 63.7 5.1 34 131-164 39-72 (103)
270 1wfv_A Membrane associated gua 98.5 5.8E-08 2E-12 65.5 3.1 45 120-164 22-69 (103)
271 2iwq_A Multiple PDZ domain pro 98.5 1.8E-07 6.3E-12 65.6 5.8 34 131-164 59-92 (123)
272 4e34_A Golgi-associated PDZ an 98.5 1.1E-07 3.6E-12 62.3 4.3 33 131-164 28-61 (87)
273 1wfg_A Regulating synaptic mem 98.5 1.2E-07 4.3E-12 67.2 4.9 35 130-164 64-98 (131)
274 1qav_A Alpha-1 syntrophin (res 98.5 1.1E-07 3.8E-12 62.7 4.3 33 131-164 30-63 (90)
275 2kjd_A Sodium/hydrogen exchang 98.5 2.1E-07 7E-12 65.3 5.9 50 114-164 14-65 (128)
276 3khf_A Microtubule-associated 98.5 1.3E-07 4.5E-12 63.4 4.6 32 132-164 35-66 (99)
277 1ihj_A INAD; intermolecular di 98.5 1.4E-07 4.8E-12 63.1 4.7 34 131-164 37-70 (98)
278 1uju_A Scribble; PDZ domain, c 98.5 8.7E-08 3E-12 65.7 3.7 35 130-164 43-77 (111)
279 1um7_A Synapse-associated prot 98.5 1.2E-07 4.2E-12 64.9 4.4 52 113-164 19-72 (113)
280 1i16_A Interleukin 16, LCF; cy 98.5 6.2E-08 2.1E-12 68.6 2.9 35 130-164 56-90 (130)
281 2dmz_A INAD-like protein; PDZ 98.5 1.6E-07 5.5E-12 66.1 5.0 35 130-164 45-79 (129)
282 2kpk_A Membrane-associated gua 98.5 1.4E-07 4.7E-12 66.7 4.6 34 131-164 43-76 (129)
283 3nfk_A Tyrosine-protein phosph 98.5 1.7E-07 5.9E-12 63.7 4.9 34 131-164 43-77 (107)
284 2vz5_A TAX1-binding protein 3; 98.5 2.3E-07 7.9E-12 66.5 5.7 34 130-164 63-96 (139)
285 2edz_A PDZ domain-containing p 98.5 9.9E-08 3.4E-12 65.8 3.5 34 130-164 37-70 (114)
286 1x6d_A Interleukin-16; PDZ dom 98.4 1.1E-07 3.9E-12 66.0 3.5 34 131-164 42-75 (119)
287 2yuy_A RHO GTPase activating p 98.4 9.2E-08 3.1E-12 67.2 3.0 34 130-164 60-93 (126)
288 2rcz_A Tight junction protein 98.4 2.3E-07 8E-12 59.5 4.7 34 131-164 21-54 (81)
289 3cyy_A Tight junction protein 98.4 2.6E-07 9E-12 60.9 5.0 34 131-164 23-56 (92)
290 1y7n_A Amyloid beta A4 precurs 98.4 2.4E-07 8.3E-12 61.5 4.8 30 134-164 34-63 (90)
291 2iwo_A Multiple PDZ domain pro 98.4 2.1E-07 7.3E-12 65.0 4.6 34 131-164 53-86 (120)
292 1wf7_A Enigma homologue protei 98.4 1.1E-07 3.7E-12 64.4 2.9 33 131-164 29-61 (103)
293 1v62_A KIAA1719 protein; struc 98.4 1.6E-07 5.6E-12 65.2 3.9 33 132-164 43-75 (117)
294 2o2t_A Multiple PDZ domain pro 98.4 1.2E-07 4.3E-12 65.5 3.3 35 130-164 48-82 (117)
295 1nf3_C PAR-6B; semi-CRIB motif 98.4 2.4E-07 8.3E-12 65.3 4.7 34 131-164 65-98 (128)
296 1wg6_A Hypothetical protein (r 98.4 9.7E-08 3.3E-12 67.4 2.6 34 131-164 55-88 (127)
297 3bpu_A Membrane-associated gua 98.4 3.2E-07 1.1E-11 60.2 5.0 47 115-164 9-57 (88)
298 1n7t_A 99-MER peptide of densi 98.4 2E-07 6.8E-12 63.0 4.1 34 129-164 41-74 (103)
299 2gzv_A PRKCA-binding protein; 98.4 3.6E-07 1.2E-11 63.3 5.4 34 131-164 50-83 (114)
300 1wh1_A KIAA1095 protein; PDZ d 98.4 3.6E-07 1.2E-11 64.0 5.2 34 131-164 48-81 (124)
301 2dc2_A GOPC, golgi associated 98.4 2.4E-07 8.1E-12 62.9 4.0 33 131-164 35-68 (103)
302 1qau_A Neuronal nitric oxide s 98.4 3.6E-07 1.2E-11 62.6 4.9 43 121-164 14-59 (112)
303 1vb7_A PDZ and LIM domain 2; P 98.4 1.2E-07 4.2E-12 63.1 2.4 33 131-164 30-62 (94)
304 2h2b_A Tight junction protein 98.4 4.4E-07 1.5E-11 61.7 5.2 33 130-164 38-70 (107)
305 1uf1_A KIAA1526 protein; PDZ d 98.4 3.8E-07 1.3E-11 64.1 5.0 33 131-164 46-78 (128)
306 2yt7_A Amyloid beta A4 precurs 98.4 3.8E-07 1.3E-11 61.6 4.8 33 132-164 38-70 (101)
307 2db5_A INAD-like protein; PDZ 98.4 1.4E-07 4.9E-12 66.3 2.8 34 131-164 54-87 (128)
308 2edp_A Fragment, shroom family 98.4 2.1E-07 7.1E-12 62.8 3.1 33 131-164 35-68 (100)
309 1v6b_A Harmonin isoform A1; st 98.4 4.7E-07 1.6E-11 63.0 4.9 34 131-164 43-76 (118)
310 2z17_A Pleckstrin homology SEC 98.3 3.4E-07 1.1E-11 62.0 4.0 34 130-164 47-80 (104)
311 1v5q_A GRIP1 homolog, glutamat 98.3 5.5E-07 1.9E-11 62.9 5.2 35 130-164 44-78 (122)
312 2pzd_A Serine protease HTRA2; 98.3 7.4E-07 2.5E-11 61.1 5.7 34 130-164 34-67 (113)
313 1vae_A Rhophilin 2, rhophilin, 98.3 2.6E-07 9E-12 63.8 3.3 50 113-164 19-68 (111)
314 2cs5_A Tyrosine-protein phosph 98.3 2.8E-07 9.7E-12 63.9 3.5 33 131-164 41-75 (119)
315 2d8i_A T-cell lymphoma invasio 98.3 1.8E-07 6.1E-12 65.0 2.4 33 131-164 44-76 (114)
316 1v5l_A PDZ and LIM domain 3; a 98.3 1.4E-07 4.7E-12 63.9 1.8 33 131-164 29-61 (103)
317 1x5n_A Harmonin; PDZ domain, u 98.3 6.4E-07 2.2E-11 61.6 5.0 33 131-164 41-73 (114)
318 2csj_A TJP2 protein; PDZ domai 98.3 5.6E-07 1.9E-11 62.2 4.7 33 130-164 45-77 (117)
319 2qbw_A PDZ-fibronectin fusion 98.3 1.5E-06 5.2E-11 64.8 7.2 37 126-164 19-55 (195)
320 3suz_A Amyloid beta A4 precurs 98.3 1.7E-07 5.9E-12 77.8 2.1 79 8-106 268-349 (388)
321 3k1r_A Harmonin; protein-prote 98.3 4.2E-07 1.4E-11 68.3 3.7 34 130-164 109-142 (192)
322 2pzd_A Serine protease HTRA2; 98.3 9.5E-07 3.2E-11 60.6 5.2 36 70-106 34-69 (113)
323 2p3w_A Probable serine proteas 98.3 1.2E-06 4.3E-11 60.0 5.6 34 130-164 34-67 (112)
324 3rle_A Golgi reassembly-stacki 98.3 3.8E-06 1.3E-10 63.8 8.7 81 17-106 60-146 (209)
325 3i18_A LMO2051 protein; alpha- 98.3 1.1E-06 3.8E-11 59.2 5.0 33 130-164 6-38 (100)
326 1uew_A Membrane associated gua 98.3 7.1E-07 2.4E-11 61.4 4.0 32 132-164 44-76 (114)
327 3i18_A LMO2051 protein; alpha- 98.3 1.4E-06 4.9E-11 58.7 5.5 35 70-106 6-40 (100)
328 2p3w_A Probable serine proteas 98.2 1.3E-06 4.6E-11 59.8 5.2 36 70-106 34-69 (112)
329 2krg_A Na(+)/H(+) exchange reg 98.2 8.3E-07 2.8E-11 68.2 4.5 51 113-164 13-65 (216)
330 3id1_A Regulator of sigma E pr 98.2 1.1E-06 3.9E-11 58.8 4.6 31 133-164 4-34 (95)
331 2edv_A FERM and PDZ domain-con 98.2 3.2E-07 1.1E-11 61.5 1.8 41 121-164 22-62 (96)
332 4a8c_A Periplasmic PH-dependen 98.2 9.3E-06 3.2E-10 68.2 10.9 82 19-106 308-397 (436)
333 2kl1_A YLBL protein; structure 98.2 7.1E-07 2.4E-11 59.6 3.0 35 70-106 4-38 (94)
334 2kjp_A Uncharacterized protein 98.2 2.8E-07 9.6E-12 61.4 0.9 31 132-164 2-32 (91)
335 3id1_A Regulator of sigma E pr 98.2 1.4E-06 4.9E-11 58.2 4.4 33 73-106 4-36 (95)
336 2lob_A Golgi-associated PDZ an 97.5 2E-07 6.7E-12 64.5 0.0 33 131-164 53-86 (112)
337 2kl1_A YLBL protein; structure 98.2 6.4E-07 2.2E-11 59.8 2.4 33 130-164 4-36 (94)
338 2l97_A HTRA, putative serine p 98.2 1.9E-06 6.5E-11 61.2 5.0 32 131-164 57-88 (134)
339 1b8q_A Protein (neuronal nitri 98.2 6.8E-07 2.3E-11 62.7 2.6 43 121-164 21-66 (127)
340 2l97_A HTRA, putative serine p 98.2 2.3E-06 7.9E-11 60.8 5.3 35 70-106 56-90 (134)
341 1ujv_A Membrane associated gua 98.2 2.2E-06 7.5E-11 57.4 4.6 47 115-164 16-62 (96)
342 2i6v_A General secretion pathw 98.2 1.1E-06 3.8E-11 57.7 3.0 32 132-164 20-51 (87)
343 2kjp_A Uncharacterized protein 98.1 4.2E-07 1.4E-11 60.5 0.9 33 72-106 2-34 (91)
344 2zpm_A Regulator of sigma E pr 98.1 1.3E-06 4.3E-11 57.6 3.2 32 132-164 5-36 (91)
345 3tsz_A Tight junction protein 98.1 1.7E-06 5.8E-11 72.0 4.7 43 121-164 20-63 (391)
346 2i6v_A General secretion pathw 98.1 1.5E-06 5E-11 57.1 3.4 35 71-106 19-53 (87)
347 1z87_A Alpha-1-syntrophin; pro 98.1 2.1E-06 7.3E-11 67.8 4.0 44 120-164 89-136 (263)
348 3soe_A Membrane-associated gua 98.1 3.6E-06 1.2E-10 58.4 4.6 49 113-164 16-64 (113)
349 2zpm_A Regulator of sigma E pr 98.1 1.6E-06 5.5E-11 57.0 2.7 34 72-106 5-38 (91)
350 2yub_A LIMK-2, LIM domain kina 98.1 1.3E-06 4.4E-11 60.9 2.2 33 131-164 44-78 (118)
351 3k50_A Putative S41 protease; 98.0 5.5E-06 1.9E-10 69.2 6.0 52 51-106 73-124 (403)
352 2i4s_A General secretion pathw 97.9 6.1E-06 2.1E-10 56.0 3.6 32 132-164 38-69 (105)
353 1y8t_A Hypothetical protein RV 97.9 1.9E-05 6.4E-10 63.6 6.7 36 70-106 241-276 (324)
354 3shw_A Tight junction protein 97.9 6.9E-06 2.3E-10 69.8 4.3 44 120-164 11-55 (468)
355 2i4s_A General secretion pathw 97.9 7.8E-06 2.7E-10 55.5 3.7 35 71-106 37-71 (105)
356 3stj_A Protease DEGQ; serine p 97.9 1.2E-05 4.3E-10 65.6 5.1 34 130-164 262-295 (345)
357 1fc6_A Photosystem II D1 prote 97.9 2.4E-05 8.3E-10 64.7 6.8 49 52-106 85-133 (388)
358 2hga_A Conserved protein MTH13 97.9 2.4E-05 8.2E-10 55.0 5.5 33 130-164 24-56 (125)
359 2hga_A Conserved protein MTH13 97.8 2.8E-05 9.5E-10 54.6 5.8 35 70-106 24-58 (125)
360 1lcy_A HTRA2 serine protease; 97.8 2.2E-05 7.6E-10 63.4 5.8 34 130-164 255-288 (325)
361 1te0_A Protease DEGS; two doma 97.8 1.6E-05 5.4E-10 64.0 4.9 34 130-164 243-276 (318)
362 3stj_A Protease DEGQ; serine p 97.8 1.5E-05 5.1E-10 65.1 4.7 36 70-106 262-297 (345)
363 1te0_A Protease DEGS; two doma 97.8 1.9E-05 6.6E-10 63.5 5.0 36 70-106 243-278 (318)
364 1lcy_A HTRA2 serine protease; 97.8 2.9E-05 9.8E-10 62.8 5.3 36 70-106 255-290 (325)
365 1y8t_A Hypothetical protein RV 97.8 2.6E-05 8.8E-10 62.8 5.0 34 130-164 241-274 (324)
366 1fc6_A Photosystem II D1 prote 97.7 2.9E-05 9.8E-10 64.2 5.0 34 130-164 98-131 (388)
367 3pv2_A DEGQ; trypsin fold, PDZ 97.7 3.2E-05 1.1E-09 65.3 5.3 33 131-164 282-314 (451)
368 4fgm_A Aminopeptidase N family 97.7 4.3E-05 1.5E-09 66.7 5.6 45 52-105 485-529 (597)
369 3k50_A Putative S41 protease; 97.7 3.2E-05 1.1E-09 64.5 4.2 32 132-164 91-122 (403)
370 3qo6_A Protease DO-like 1, chl 97.7 5E-05 1.7E-09 61.9 5.3 35 71-106 251-296 (348)
371 4fgm_A Aminopeptidase N family 97.6 3E-05 1E-09 67.8 4.0 33 131-164 496-528 (597)
372 3qo6_A Protease DO-like 1, chl 97.5 5.4E-05 1.8E-09 61.7 3.5 33 131-164 251-294 (348)
373 3num_A Serine protease HTRA1; 97.4 2E-05 6.9E-10 63.8 0.0 33 131-164 254-286 (332)
374 3num_A Serine protease HTRA1; 97.3 3.1E-05 1.1E-09 62.7 0.0 36 70-106 253-288 (332)
375 1ky9_A Protease DO, DEGP, HTRA 97.1 7.8E-05 2.7E-09 62.9 0.4 33 131-164 286-318 (448)
376 4fln_A Protease DO-like 2, chl 96.8 0.0016 5.4E-08 56.2 5.5 33 130-164 276-308 (539)
377 1k32_A Tricorn protease; prote 96.4 0.0045 1.5E-07 56.4 6.2 46 52-106 737-791 (1045)
378 1k32_A Tricorn protease; prote 96.0 0.0042 1.4E-07 56.6 4.0 33 131-164 748-789 (1045)
379 1at0_A 17-hedgehog; developmen 64.4 8.9 0.0003 26.7 4.3 73 89-161 20-103 (145)
380 3dor_A Protein CT_858, CPAF; m 57.0 19 0.00063 31.3 5.7 30 72-106 97-126 (583)
381 3dor_A Protein CT_858, CPAF; m 47.6 18 0.0006 31.4 4.1 28 132-164 97-124 (583)
382 1a62_A RHO; transcription term 27.9 89 0.0031 21.3 4.4 46 46-98 54-99 (130)
383 2j3t_D Trafficking protein par 21.6 59 0.002 24.5 2.7 23 83-106 51-73 (219)
384 2j3t_D Trafficking protein par 20.3 58 0.002 24.5 2.4 20 144-164 52-71 (219)
No 1
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.92 E-value=8.1e-24 Score=159.49 Aligned_cols=127 Identities=50% Similarity=0.793 Sum_probs=100.7
Q ss_pred CCceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccCC----------
Q psy12206 38 GNMKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSEDK---------- 107 (164)
Q Consensus 38 ~~~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~~---------- 107 (164)
.+++.++++|.|+..+|||++.++.+.++...+.+++|..|.|+|||+++|+|++||+|++|||.++.+.
T Consensus 2 ~~~~~~~v~l~~~~~~lG~~i~~g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~ 81 (196)
T 3gsl_A 2 GSMEYEEITLERGNSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALK 81 (196)
T ss_dssp -CEEEEEEEEECBTTBSSEEEECCTTSCTTSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCcEEEEEEEEECCCCCCEEEEcccCCcccCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 4678999999999999999999998876544568999999999999999999999999999999999871
Q ss_pred cCCCceeE-----------------eeeccCCCCcc--------cCCCCCeEEEEECCCChhhhcCCCCCCCEEEEECCE
Q psy12206 108 RASPGIFL-----------------CNIAGGIGNQH--------IPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNS 162 (164)
Q Consensus 108 ~a~~~v~l-----------------~~~~~~~~~~~--------~~~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~ 162 (164)
.+...+.| .....++|+.. .....|++|.+|.++|||+++|+|++||+|++|||+
T Consensus 82 ~~g~~v~l~v~r~~~~~~~~~~v~l~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~ 161 (196)
T 3gsl_A 82 EAGSIVRLYVMRRKPPAEKVMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSV 161 (196)
T ss_dssp TSCSEEEEEEEEECCCCEEEEEEEEEEBTTBSCEEEEESBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTE
T ss_pred hCCCcEEEEEEecCCCccccEEEEEecCCCCceEEEEccCCCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCC
Confidence 11222222 11112333322 223458999999999999999999999999999999
Q ss_pred eC
Q psy12206 163 TR 164 (164)
Q Consensus 163 ~v 164 (164)
+|
T Consensus 162 ~v 163 (196)
T 3gsl_A 162 GL 163 (196)
T ss_dssp EC
T ss_pred cC
Confidence 86
No 2
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.86 E-value=2.4e-21 Score=147.68 Aligned_cols=122 Identities=21% Similarity=0.363 Sum_probs=96.5
Q ss_pred ceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC--Cc---------
Q psy12206 40 MKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED--KR--------- 108 (164)
Q Consensus 40 ~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~--~~--------- 108 (164)
.+...++|.|+..+|||++.++.+... ..+++|..|.++|||+++|+|++||+|++|||+++.+ ..
T Consensus 17 ~~~~~v~~~~~~~~lG~~i~~g~~~~~---~~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~ 93 (206)
T 3r0h_A 17 NKKILIELKVEKKPMGVIVCGGKNNHV---TTGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFH 93 (206)
T ss_dssp TSCEEEEEECTTSCCCEEEECCSSSSC---CSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHH
T ss_pred CCEEEEEEEeCCCCcCEEEecccCCCC---CCCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHH
Confidence 356778999988999999999887543 2589999999999999998899999999999999977 21
Q ss_pred -CCCc-eeE--------------eee----ccCCCCcccCCCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 109 -ASPG-IFL--------------CNI----AGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 109 -a~~~-v~l--------------~~~----~~~~~~~~~~~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.... +.| ..+ ..++|+.......|++|.+|.++|+|+++|+|++||+|++|||++|
T Consensus 94 ~~~~~~v~l~v~R~~~~~~~~~~v~l~~~~~~~lG~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v 169 (206)
T 3r0h_A 94 TTYEKAVTLTVFRADPPELEKFNVDLMKKAGKELGLSLSPNEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDAL 169 (206)
T ss_dssp SCCSSEEEEEEECCSSCCEEEEEEEEECCTTCCCCEEEEECSSCEEEEEECTTSCHHHHHHCCTTCEEEEETTEEC
T ss_pred hcCCCceEEEEEecccCCCcEEEEEEecCCCCccCeEEEcCCceEEEEEECCCChHHHcCCCCCCCEEEEECCEEC
Confidence 1122 332 111 1234544444556899999999999999988999999999999986
No 3
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.83 E-value=1e-19 Score=161.97 Aligned_cols=127 Identities=49% Similarity=0.780 Sum_probs=101.8
Q ss_pred CCceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccCC----------
Q psy12206 38 GNMKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSEDK---------- 107 (164)
Q Consensus 38 ~~~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~~---------- 107 (164)
.++++++|.|.|+..||||+|.||.+.+....+.+++|..|.++|||+++|+|++||+|++|||.++.+.
T Consensus 56 ~~~~~~~v~l~k~~~glGf~i~gg~~~~~~~~~~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 135 (721)
T 2xkx_A 56 GEMEYEEITLERGNSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALK 135 (721)
T ss_pred CCceEEEEEEEeCCCCCCEEEeCCcCCcccCCCCCeEEEEeCCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHhh
Confidence 5678899999999999999999999876555578999999999999999999999999999999999871
Q ss_pred cCCCce-----------------eEeeeccCCCCccc--------CCCCCeEEEEECCCChhhhcCCCCCCCEEEEECCE
Q psy12206 108 RASPGI-----------------FLCNIAGGIGNQHI--------PGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNS 162 (164)
Q Consensus 108 ~a~~~v-----------------~l~~~~~~~~~~~~--------~~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~ 162 (164)
.+...| +|.....++|+... ....|++|..|.++|+|+++|+|++||+|++|||+
T Consensus 136 ~~g~~v~l~v~R~~~~~~~~~~v~l~k~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~ 215 (721)
T 2xkx_A 136 EAGSIVRLYVMRRKPPAEKVMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSV 215 (721)
T ss_pred ccccccceEEEecccccccceeeeeeeecCCCceeeccCCCccccCCCCceEEEEeCCCCchhhcCCCCCCCEEEEECCe
Confidence 111211 12111223444322 22469999999999999999999999999999998
Q ss_pred eC
Q psy12206 163 TR 164 (164)
Q Consensus 163 ~v 164 (164)
+|
T Consensus 216 ~v 217 (721)
T 2xkx_A 216 GL 217 (721)
T ss_pred eC
Confidence 75
No 4
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.81 E-value=8.1e-19 Score=133.15 Aligned_cols=125 Identities=22% Similarity=0.378 Sum_probs=96.1
Q ss_pred CceEEEEEEEcCC-CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC----------C
Q psy12206 39 NMKILDIELVKGN-KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED----------K 107 (164)
Q Consensus 39 ~~~~~~v~L~k~~-~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~----------~ 107 (164)
..++++|.|.|++ .+|||++.++.+.+.. ...+++|..|.++|||+++|+|++||+|++|||.++.+ .
T Consensus 4 ~~~~~~v~l~~~~~~glG~~i~~~~~~~~~-~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~ 82 (196)
T 1p1d_A 4 HTETTEVVLTADPVTGFGIQLQGSVFATET-LSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLR 82 (196)
T ss_dssp CCEEEEEEEECBTTTBCCCEEEECSSCSSS-CSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHH
T ss_pred ccEEEEEEEEeCCCCccCEEEeCCcCCCCC-CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 4578899999987 8899999998765321 35789999999999999999999999999999999984 1
Q ss_pred cC--CCceeE--e----------------ee----ccCCCCcccCC-----CCCeEEEEECCCChhhhcCCCCCCCEEEE
Q psy12206 108 RA--SPGIFL--C----------------NI----AGGIGNQHIPG-----DNGIYVTKIMDGGAAQVDGRLQVGDKLIA 158 (164)
Q Consensus 108 ~a--~~~v~l--~----------------~~----~~~~~~~~~~~-----~~gv~I~~v~~gs~A~~~G~L~~GD~Il~ 158 (164)
.. ...++| . .+ ...+|+.+... ..|++|.+|.++|||+++|+|++||+|++
T Consensus 83 ~~~~g~~v~l~v~R~~~~~~~~~~~~~~v~l~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~ 162 (196)
T 1p1d_A 83 DSSITSKVTLEIEFDVAESVIPSSGTFHVKLPKKHSVELGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDKLLA 162 (196)
T ss_dssp TCCSSSEEEEEEEECSCSCCBCCSSCEEEEECCCSSCCCCCEEECSCSSSTTCCCEEEECCSSSHHHHTSCCCTTCEEEE
T ss_pred hCCCCCeEEEEEEecCCCCCCCCCCcEEEEecCCCCCCcCEEEECCCCCCCCCCEEEEEECCCCcHHhcCCCCCCCEEEE
Confidence 11 222332 1 01 11233333222 46899999999999999999999999999
Q ss_pred ECCEeC
Q psy12206 159 VRNSTR 164 (164)
Q Consensus 159 VNg~~v 164 (164)
|||+++
T Consensus 163 vng~~v 168 (196)
T 1p1d_A 163 IDNIRL 168 (196)
T ss_dssp ETTEEG
T ss_pred ECCEEC
Confidence 999875
No 5
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.77 E-value=5.9e-18 Score=150.72 Aligned_cols=156 Identities=42% Similarity=0.730 Sum_probs=112.7
Q ss_pred eeeeeeechhhhhhhccCceeeEEEeecccCCCCCceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChh
Q psy12206 5 VISYYCQTCLKVIALNVGISKFMYVRRKKVTRQGNMKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAA 84 (164)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A 84 (164)
+..+.+.+.. ...+..+..+.|.|+|..+..+ .+.+++|.++..+|||++.++.+....+...|++|..|.++|+|
T Consensus 122 v~~~~~~~~~-~~l~~~g~~v~l~v~R~~~~~~---~~~~v~l~k~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~gs~A 197 (721)
T 2xkx_A 122 VREVTHSAAV-EALKEAGSIVRLYVMRRKPPAE---KVMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAA 197 (721)
T ss_pred CCCCCHHHHH-HHhhccccccceEEEecccccc---cceeeeeeeecCCCceeeccCCCccccCCCCceEEEEeCCCCch
Confidence 3333334443 3345678899999988776433 45778898887889999998765543334578999999999999
Q ss_pred hhcCCCCCCCEEEEECCeeccCC----------cCCCceeE--ee-----------------------------------
Q psy12206 85 QVDGRLQVGDKLIAVRNSTSEDK----------RASPGIFL--CN----------------------------------- 117 (164)
Q Consensus 85 ~~~G~L~~GD~Il~VNG~~v~~~----------~a~~~v~l--~~----------------------------------- 117 (164)
+++|+|++||+|++|||.++.+. .....+.| ..
T Consensus 198 ~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~V~R~g~~~~~~~~~~p~~~~~~s~~~~~~~~~~~~~~~ 277 (721)
T 2xkx_A 198 HKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTYDVVYLKVAKPSNAYLSDSYAPPDITTSYSQHLDNEISHSSYLGT 277 (721)
T ss_pred hhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHHcCCCeEEEEEEeCCcccccCCCCCCCcccCCCCCcccccCCcccccc
Confidence 99999999999999999999871 11122222 00
Q ss_pred --------------------------------------eccCCCCcccC--CCCCeEEEEECCCChhhhcCCCCCCCEEE
Q psy12206 118 --------------------------------------IAGGIGNQHIP--GDNGIYVTKIMDGGAAQVDGRLQVGDKLI 157 (164)
Q Consensus 118 --------------------------------------~~~~~~~~~~~--~~~gv~I~~v~~gs~A~~~G~L~~GD~Il 157 (164)
...++|+.... ...|++|..|.++|+|+++|+|++||+|+
T Consensus 278 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~l~~~~~~lG~~i~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il 357 (721)
T 2xkx_A 278 DYPTAMTPTSPRRYSPVAKDLLGEEDIPREPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQIL 357 (721)
T ss_pred cccccCCCCCCcccCCcccccccccccccceEEEEEEECCCCccEEEeccCCCCCeEEEEeCCCChHHhcCCCccCCEEE
Confidence 00011111111 13588999999999999999999999999
Q ss_pred EECCEeC
Q psy12206 158 AVRNSTR 164 (164)
Q Consensus 158 ~VNg~~v 164 (164)
+|||++|
T Consensus 358 ~VNg~~v 364 (721)
T 2xkx_A 358 SVNGVDL 364 (721)
T ss_pred EECCEEC
Confidence 9999975
No 6
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.76 E-value=1.1e-17 Score=127.11 Aligned_cols=118 Identities=25% Similarity=0.373 Sum_probs=88.9
Q ss_pred eEEEEEEEcCC-CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhc-CCCCCCCEEEEECCeeccCC----------c
Q psy12206 41 KILDIELVKGN-KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVD-GRLQVGDKLIAVRNSTSEDK----------R 108 (164)
Q Consensus 41 ~~~~v~L~k~~-~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~-G~L~~GD~Il~VNG~~v~~~----------~ 108 (164)
.++.+.|.|.. .+|||++.++.+. ..+++|..|.++|||+++ | |++||+|++|||.++.+. .
T Consensus 7 ~~~~v~l~~~~~~~lG~~i~~~~~~-----~~~~~V~~v~~~spA~~agg-l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 80 (200)
T 2qt5_A 7 GSTVVELMKKEGTTLGLTVSGGIDK-----DGKPRVSNLRQGGIAARSDQ-LDVGDYIKAVNGINLAKFRHDEIISLLKN 80 (200)
T ss_dssp EEEEEEEECCTTCCCCEEEECCTTS-----SSCSEEEEECTTSHHHHTTS-CCTTCEEEEETTEECTTSCHHHHHHHHHT
T ss_pred CCEEEEEEeCCCCCCCEEEecccCC-----CCCeEEEEECCCChHHhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 46778888765 7899999998753 357899999999999999 6 999999999999999872 1
Q ss_pred CCCceeE--e-----------------------eeccCCCCccc-------CCCCCeEEEEECCCChhhhcCCCCCCCEE
Q psy12206 109 ASPGIFL--C-----------------------NIAGGIGNQHI-------PGDNGIYVTKIMDGGAAQVDGRLQVGDKL 156 (164)
Q Consensus 109 a~~~v~l--~-----------------------~~~~~~~~~~~-------~~~~gv~I~~v~~gs~A~~~G~L~~GD~I 156 (164)
+...+.| . .....+|+... ....|++|..|.++|||+++|+|++||+|
T Consensus 81 ~g~~v~l~v~R~~~~~~~~g~~~~~~~~~v~l~~~~~~lG~~l~~g~~~~~~~~~g~~V~~v~~~s~A~~aG~l~~GD~I 160 (200)
T 2qt5_A 81 VGERVVLEVEYELPPVSIQGSSVMFRTVEVTLHKEGNTFGFVIRGGAHDDRNKSRPVVITCVRPGGPADREGTIKPGDRL 160 (200)
T ss_dssp CCSEEEEEEEEECCCCCCCCSSEEEEEEEEEEECBTTBCSEEEEEECCSSTTTCEEEEEEEECTTSHHHHHCCCCTTCEE
T ss_pred CCCeEEEEEeccCCCcccCCCccceeEEEEEEecCCCCeEEEEECCCCCCccCCCCEEEEEECCCChHHHcCCCCCCCEE
Confidence 1222222 1 00112222211 11358999999999999999999999999
Q ss_pred EEECCEeC
Q psy12206 157 IAVRNSTR 164 (164)
Q Consensus 157 l~VNg~~v 164 (164)
++|||+++
T Consensus 161 ~~ing~~v 168 (200)
T 2qt5_A 161 LSVDGIRL 168 (200)
T ss_dssp EEETTEEC
T ss_pred EEECCEEC
Confidence 99999875
No 7
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.74 E-value=4.4e-17 Score=120.61 Aligned_cols=110 Identities=22% Similarity=0.396 Sum_probs=84.9
Q ss_pred eEEEEEEEcCC-CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC-Cc--C-------
Q psy12206 41 KILDIELVKGN-KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED-KR--A------- 109 (164)
Q Consensus 41 ~~~~v~L~k~~-~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~-~~--a------- 109 (164)
++++|.|.|.. .+|||++... +.+++|..|.++|||+++| |++||+|++|||.++.+ .+ .
T Consensus 4 ~~r~v~l~k~~~~~lG~~~~~~--------~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~ 74 (166)
T 1w9e_A 4 DPREVILCKDQDGKIGLRLKSI--------DNGIFVQLVQANSPASLVG-LRFGDQVLQINGENCAGWSSDKAHKVLKQA 74 (166)
T ss_dssp CCEEEEEECCTTSCCSEEEEEE--------TTEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHHC
T ss_pred CCEEEEEEeCCCCcEeEEEEeC--------CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 57889999976 5799999873 3689999999999999999 99999999999999988 22 1
Q ss_pred -CCceeE----------eeec----cCCCCcccCCCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 110 -SPGIFL----------CNIA----GGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 110 -~~~v~l----------~~~~----~~~~~~~~~~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
...++| +.+. ..+|+... .| +|..+.++|||+++| |++||+|++|||+++
T Consensus 75 ~~~~v~l~vr~~~~~~~v~l~~~~~~~lG~~~~---~g-~v~~v~~~s~a~~aG-l~~GD~I~~ing~~v 139 (166)
T 1w9e_A 75 FGEKITMTIRDRPFERTITMHKDSTGHVGFIFK---NG-KITSIVKDSSAARNG-LLTEHNICEINGQNV 139 (166)
T ss_dssp CSSEEEEEEECCTTCEEEEEECCTTSCCSEEEE---TT-EEEEECTTSHHHHTT-CCSSEEEEEETTEEC
T ss_pred CCCEEEEEEEcCCCcEEEEEecCCCCcEeEEEe---CC-EEEEEccCCHHHHcC-CCCCCEEEEECCEEC
Confidence 112333 1111 11222111 23 889999999999999 999999999999875
No 8
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=99.66 E-value=4.6e-17 Score=135.72 Aligned_cols=116 Identities=20% Similarity=0.340 Sum_probs=54.2
Q ss_pred eEEEEEEEcCC-CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccCC---c-------C
Q psy12206 41 KILDIELVKGN-KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSEDK---R-------A 109 (164)
Q Consensus 41 ~~~~v~L~k~~-~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~~---~-------a 109 (164)
..+.+.+.|.+ .+|||+|.+..... ...+++|..|.++|||+++|+|++||+|++|||.++.+. + .
T Consensus 204 ~~~~V~i~k~~ge~lG~~i~~~~~g~---~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~ 280 (388)
T 3suz_A 204 NCKELQLEKHKGEILGVVVVESGWGS---ILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGL 280 (388)
T ss_dssp CCEEEEECCCSSCCCCCCCBCC---C---CSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTC
T ss_pred cceEEEEECCCCCceeEEEEecCCCC---cCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhc
Confidence 46788998875 78999998843211 235689999999999999999999999999999999871 1 1
Q ss_pred CC--ceeEe----------ee-----ccCCCCcccCCCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 110 SP--GIFLC----------NI-----AGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 110 ~~--~v~l~----------~~-----~~~~~~~~~~~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.+ .++|. .+ .+++|+.. .+.+|.+|.++|+|+++| |++||+|++|||++|
T Consensus 281 ~~~~~v~l~v~r~~~~~~v~l~~~~~~~~lG~~i----~~g~I~~V~~gs~A~~aG-L~~GD~Il~VNg~~v 347 (388)
T 3suz_A 281 KNQTQVKLNIVSCPPVTTVLIKRPDLKYQLGFSV----QNGIICSLMRGGIAERGG-VRVGHRIIEINGQSV 347 (388)
T ss_dssp TTCSCEEEEEEECCSCC-------------------------------------------------------
T ss_pred cCCCccccccccccccceeeEeecCCCCccceEE----ecCEEEEeecCCHHHHcC-CCCCCEEEEECCEEC
Confidence 11 23331 01 11222221 133899999999999999 999999999999875
No 9
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.57 E-value=1.4e-14 Score=98.77 Aligned_cols=69 Identities=51% Similarity=0.859 Sum_probs=62.4
Q ss_pred CCceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 38 GNMKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 38 ~~~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
++|++++|+|.|+..+|||++.++.+.++.....+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 1 ~~~~~~~v~l~k~~~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~ 69 (102)
T 2i1n_A 1 SMFKYEEIVLERGNSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSE 69 (102)
T ss_dssp -CEEEEEEEEECBTTBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSS
T ss_pred CCceEEEEEEEECCCcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCC
Confidence 368899999999889999999999877665557899999999999999999999999999999999976
No 10
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=99.56 E-value=7.1e-15 Score=112.76 Aligned_cols=92 Identities=17% Similarity=0.291 Sum_probs=68.9
Q ss_pred CCCcEEEEEeCCCChhhhcCCCCCC-CEEEEECCeeccC-Cc---------CCCceeE------------eeec------
Q psy12206 69 GDNGIYVTKIMDGGAAQVDGRLQVG-DKLIAVRNSTSED-KR---------ASPGIFL------------CNIA------ 119 (164)
Q Consensus 69 ~~~gv~V~~V~~gs~A~~~G~L~~G-D~Il~VNG~~v~~-~~---------a~~~v~l------------~~~~------ 119 (164)
...|++|..|.++|||+++| |++| |+|++|||+++.+ .+ ....+++ +.+.
T Consensus 14 ~~~G~~V~~V~~~SpA~~AG-L~~G~D~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~~~~~v~l~p~~~~~ 92 (209)
T 3rle_A 14 GTEGYHVLRVQENSPGHRAG-LEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIYSSKTLELRETSVTPSNLWG 92 (209)
T ss_dssp SSEEEEEEEECTTSHHHHTT-CCTTTEEEEEETTEECCSSSSHHHHHHHHTTTSCEEEEEEETTTCCEEEEEECCCSSSS
T ss_pred CCCEEEEEEECCCCHHHHCC-CCcCCeEEEEECCEECcCHHHHHHHHHhcCCCCEEEEEEEecCCceEEEEEEccccccc
Confidence 34789999999999999999 9999 9999999999987 11 1122332 1111
Q ss_pred --cCCCCccc------CCCCCeEEEEECCCChhhhcCCCCC-CCEEEEECCE
Q psy12206 120 --GGIGNQHI------PGDNGIYVTKIMDGGAAQVDGRLQV-GDKLIAVRNS 162 (164)
Q Consensus 120 --~~~~~~~~------~~~~gv~I~~v~~gs~A~~~G~L~~-GD~Il~VNg~ 162 (164)
+.+|.... ....|++|.+|.++|||+++| |++ ||+|++|||+
T Consensus 93 ~~~~lGi~~~~~~~~~~~~~Gv~V~~V~~~spA~~aG-l~~~GD~I~~ing~ 143 (209)
T 3rle_A 93 GQGLLGVSIRFCSFDGANENVWHVLEVESNSPAALAG-LRPHSDYIIGADTV 143 (209)
T ss_dssp SSSSSCEEEEEEECTTGGGSCEEEEEECTTSHHHHHT-CCTTTEEEEEESSC
T ss_pred ccCccceEEeecChhHccccceEEEEeCCCChHHHCC-CCCCCCEEEECCCE
Confidence 11222111 112588999999999999999 999 9999999985
No 11
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.56 E-value=1.8e-14 Score=96.67 Aligned_cols=67 Identities=70% Similarity=1.210 Sum_probs=60.9
Q ss_pred ceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 40 MKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 40 ~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
+++++|+|.|++.+|||++.++.+.+..+...+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 2 ~~~~~v~l~k~~~g~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~ 68 (94)
T 2fe5_A 2 MTIMEVNLLKGPKGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQD 68 (94)
T ss_dssp CCEEEEEEECCTTCSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTT
T ss_pred cEEEEEEEEECCCCCCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCC
Confidence 5788999999999999999998877655566799999999999999999999999999999999976
No 12
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.51 E-value=5.8e-14 Score=96.30 Aligned_cols=66 Identities=70% Similarity=1.194 Sum_probs=59.4
Q ss_pred eEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 41 KILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 41 ~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
++++|+|.|++.+|||++.++.+.+..+.+.+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 3 ~~~~v~l~k~~~glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~ 68 (105)
T 2awx_A 3 KIMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEE 68 (105)
T ss_dssp CEEEEEEECBTTBSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTT
T ss_pred eEEEEEEEECCCCCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCC
Confidence 578899999999999999998876554456799999999999999999999999999999999976
No 13
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=99.49 E-value=2.3e-13 Score=114.86 Aligned_cols=93 Identities=19% Similarity=0.395 Sum_probs=69.4
Q ss_pred CCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC-C---------cCCCceeE----------eeec--c-------
Q psy12206 70 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED-K---------RASPGIFL----------CNIA--G------- 120 (164)
Q Consensus 70 ~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~-~---------~a~~~v~l----------~~~~--~------- 120 (164)
..|++|..|.++|||+++| |++||+|++|||+++.+ . .....++| +.+. .
T Consensus 262 ~~G~~V~~V~~~spA~~aG-L~~GD~I~~vnG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l~~~~~~~~~ 340 (436)
T 4a8c_A 262 QRGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNGKPLEVEVTLDTSTSSSAS 340 (436)
T ss_pred CcceEEEEECCCChHHHCC-CCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEECCCCccccc
Confidence 4689999999999999999 99999999999999988 1 11122222 0000 0
Q ss_pred ----CCCCc---cc-----CCCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 121 ----GIGNQ---HI-----PGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 121 ----~~~~~---~~-----~~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..+.. +. ....|++|.+|.++|||+++| |++||+|++|||+++
T Consensus 341 ~~~~~~gl~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v 395 (436)
T 4a8c_A 341 AEMITPALEGATLSDGQLKDGGKGIKIDEVVKGSPAAQAG-LQKDDVIIGVNRDRV 395 (436)
T ss_pred ccccccCceeeecccccccCCCCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEC
Confidence 00100 00 122589999999999999999 999999999999875
No 14
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.49 E-value=1.5e-13 Score=93.51 Aligned_cols=68 Identities=43% Similarity=0.775 Sum_probs=60.6
Q ss_pred CceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 39 NMKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 39 ~~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
...+++|+|.|++.+|||++.++.+.++.+...+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 5 ~~~~~~v~l~~~~~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~ 72 (101)
T 2jik_A 5 LVTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKN 72 (101)
T ss_dssp GEEEEEEEEECCTTCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSS
T ss_pred CCccEEEEEEeCCCCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCC
Confidence 34788999999999999999998876544446799999999999999999999999999999999977
No 15
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.46 E-value=3e-13 Score=94.76 Aligned_cols=66 Identities=71% Similarity=1.175 Sum_probs=59.0
Q ss_pred eEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 41 KILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 41 ~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
+.++|+|.|++.+|||++.++.+.+..+.+.+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 24 ~~~~v~l~k~~~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~ 89 (117)
T 2byg_A 24 TVVEIKLFKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEE 89 (117)
T ss_dssp EEEEEEEECBTTBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTT
T ss_pred ceEEEEEEeCCCCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC
Confidence 677889989889999999998876544456789999999999999999999999999999999985
No 16
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.45 E-value=4e-13 Score=89.37 Aligned_cols=61 Identities=39% Similarity=0.584 Sum_probs=54.8
Q ss_pred eEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 41 KILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 41 ~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
++++|.|.|.+.+|||++.++.+. ..+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 2 ~~~~v~l~~~~~g~G~~~~~g~~~-----~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~ 62 (90)
T 2q9v_A 2 MEQDIFLWRKETGFGFRILGGNEP-----GEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIG 62 (90)
T ss_dssp EEEEEEEECBTTBCCEEEEECSST-----TSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTT
T ss_pred CcEEEEEEECCCccCEEEEccccC-----CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCC
Confidence 678899999999999999987642 3569999999999999999999999999999999965
No 17
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.44 E-value=7.2e-13 Score=92.93 Aligned_cols=68 Identities=43% Similarity=0.775 Sum_probs=60.5
Q ss_pred CceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 39 NMKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 39 ~~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.+++++|+|.|++.+|||++.++.+.+......+++|..|.+++||+++|+|++||+|++|||.++.+
T Consensus 15 ~~~~~~v~l~r~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~ 82 (120)
T 2eno_A 15 LVTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKN 82 (120)
T ss_dssp EEEEEEEEEECCSSSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCS
T ss_pred CCceEEEEEEECCCCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCC
Confidence 35788899999999999999998876544446799999999999999999999999999999999987
No 18
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.44 E-value=3.5e-13 Score=89.84 Aligned_cols=60 Identities=33% Similarity=0.513 Sum_probs=54.8
Q ss_pred ceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 40 MKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 40 ~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
+++++|+|.|++.+|||++.++.+ ..+++|..|.++|||+++| |++||+|++|||.++.+
T Consensus 2 ~~~r~v~l~r~~~g~G~~~~~~~~------~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~ 61 (91)
T 1g9o_A 2 MLPRLCCLEKGPNGYGFHLHGEKG------KLGQYIRLVEPGSPAEKAG-LLAGDRLVEVNGENVEK 61 (91)
T ss_dssp CCCEEEEEECBTTBCCEEEEECTT------CSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTT
T ss_pred CccEEEEEEeCCCcccEEEEecCC------CCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCC
Confidence 577889999999999999998753 3689999999999999999 99999999999999987
No 19
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.44 E-value=2.8e-13 Score=93.48 Aligned_cols=67 Identities=31% Similarity=0.448 Sum_probs=57.9
Q ss_pred CceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 39 NMKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 39 ~~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
..++++|+|.|.+.+|||++.++.+ +..+.+.+++|..|.+++||+++|+|++||+|++|||.++.+
T Consensus 13 ~~~~~~v~l~k~~~glG~~i~~~~~-~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~ 79 (108)
T 2d92_A 13 SPEVKIVELVKDCKGLGFSILDYQD-PLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDN 79 (108)
T ss_dssp CSSCEEEEEEECSSCCSEEEEEEEC-SSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTT
T ss_pred CCceEEEEEEECCCccCEEEecccc-cCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCC
Confidence 3457889999999999999999765 222345789999999999999999999999999999999976
No 20
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.44 E-value=4e-13 Score=92.09 Aligned_cols=69 Identities=41% Similarity=0.723 Sum_probs=60.0
Q ss_pred CCceEEEEEEEcCCCCcCEEEecCCCCC-CCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 38 GNMKILDIELVKGNKGLGFSIAGGIGNQ-HIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 38 ~~~~~~~v~L~k~~~glGf~i~gg~~~~-~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
...+.+++.|.|...+|||++.++.+.+ +...+.+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 4 ~~~~~~~v~l~~~~~glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~ 73 (105)
T 1wha_A 4 GSSGRHVACLARSERGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTE 73 (105)
T ss_dssp CCCEEEEEEECCCTTCCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTT
T ss_pred CCCeeEEEEEEeCCCccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCC
Confidence 4568889999998899999999987642 22345789999999999999999999999999999999977
No 21
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=99.43 E-value=2.1e-13 Score=115.61 Aligned_cols=92 Identities=17% Similarity=0.264 Sum_probs=68.9
Q ss_pred CcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC-C---------cCCCceeE----------eeec-----------
Q psy12206 71 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED-K---------RASPGIFL----------CNIA----------- 119 (164)
Q Consensus 71 ~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~-~---------~a~~~v~l----------~~~~----------- 119 (164)
.+++|..|.++|||+++| |++||+|++|||+++.+ . .....++| +.+.
T Consensus 282 ~G~~V~~V~~~spA~~aG-L~~GDvI~~vnG~~v~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~~~~v~l~~~~~~~~~~ 360 (451)
T 3pv2_A 282 QGALVSQVNPNSPAELAG-LKAGDIITQINDTKITQATQVKTTISLLRVGSTVKIIVERDNKPLTLSAVVTDIKSHEQKL 360 (451)
T ss_dssp CCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCSHHHHHHHHHTSCTTCEEEEEEEETTEEEEEEEECBCHHHHHHHH
T ss_pred ceEEEEecCCCChHHHcC-CCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEEccCCcccccc
Confidence 689999999999999999 99999999999999988 1 11222222 0100
Q ss_pred -----cCCCCccc---------CCCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 120 -----GGIGNQHI---------PGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 120 -----~~~~~~~~---------~~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.-.+..+. ....|++|.+|.++|||+++| |++||+|++|||++|
T Consensus 361 ~~~~~~~~G~~l~~~~~~~~~~~~~~Gv~V~~V~~gspA~~aG-L~~GD~I~~Vng~~v 418 (451)
T 3pv2_A 361 QSNNPFLYGLALRAFEQESPPHGNVIGVQVVGASENSAGWRAG-IRPGDIIISANKKPV 418 (451)
T ss_dssp HHHSTTTTTEEEEEEEEECTTSCEEEEEEEEEECTTSHHHHHT-CCTTCEEEEETTEEC
T ss_pred ccccccccccccccCChhHhcccCCCceEEEEECCCCHHHHcC-CCCCCEEEEECCEEC
Confidence 00111110 012478999999999999999 999999999999875
No 22
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.42 E-value=9.4e-13 Score=88.58 Aligned_cols=65 Identities=37% Similarity=0.714 Sum_probs=57.5
Q ss_pred ceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 40 MKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 40 ~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.+++++.|.|+..+|||++.++.+.+. ...+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 4 g~~~~v~l~k~~~~lG~~i~~g~~~~~--~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~ 68 (96)
T 1d5g_A 4 GDIFEVELAKNDNSLGISVTGGVNTSV--RHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEG 68 (96)
T ss_dssp TCEEEEEEECSSSSCCEEEECCSSSCS--SSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTT
T ss_pred CCEEEEEEEeCCCCCCEEEECCCCCCC--CcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCC
Confidence 468889999988999999999875432 34689999999999999999999999999999999985
No 23
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.42 E-value=1.8e-13 Score=97.56 Aligned_cols=67 Identities=28% Similarity=0.589 Sum_probs=58.9
Q ss_pred CCceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 38 GNMKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 38 ~~~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.+.++++|+|.|+..||||+|.++.+.+. ++.+++|..|.+++||+++|.|++||+|++|||+++.+
T Consensus 26 ~~~~~~~v~l~k~~~glG~~i~gg~~~~~--~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~ 92 (130)
T 1i16_A 26 AEATVCTVTLEKMSAGLGFSLEGGKGSLH--GDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQG 92 (130)
T ss_dssp SSEEEEEEEEETTSSSTTEEEECCCCCSS--SCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGG
T ss_pred CCCcEEEEEEEcCCCccCEEEecCcCCCC--CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC
Confidence 44589999999988999999999887543 35789999999999999994499999999999999987
No 24
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.42 E-value=9.2e-13 Score=90.91 Aligned_cols=67 Identities=30% Similarity=0.656 Sum_probs=59.0
Q ss_pred CCceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 38 GNMKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 38 ~~~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
...+.++|+|.|++.+|||++.++.+.+. ...+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 5 ~~~~~~~v~l~~~~~glG~~l~~g~~~~~--~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~ 71 (110)
T 1um1_A 5 SSGYVFTVELERGPSGLGMGLIDGMHTHL--GAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLG 71 (110)
T ss_dssp SCCCEEEEEEECCTTCCCEEEEETTTSTT--CCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSS
T ss_pred CCCcEEEEEEEECCCccCEEEeCCcCCCC--CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCC
Confidence 34578899999999999999999876543 35789999999999999999999999999999999975
No 25
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.42 E-value=1e-12 Score=90.35 Aligned_cols=70 Identities=33% Similarity=0.542 Sum_probs=58.9
Q ss_pred CCCceEEEEEEEcCCCCcCEEEecCCCC---CCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 37 QGNMKILDIELVKGNKGLGFSIAGGIGN---QHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 37 ~~~~~~~~v~L~k~~~glGf~i~gg~~~---~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
..++++++|+|.|+..+|||+|.++.+. +......+++|..|.++|||+++|.|++||+|++|||.++.+
T Consensus 4 ~~~~~~~~v~l~k~~~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~ 76 (107)
T 1uhp_A 4 GSSGKSLTLVLHRDSGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSR 76 (107)
T ss_dssp CCSSEEEEEEECCSSSCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTT
T ss_pred CcCcEEEEEEEEeCCCccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCC
Confidence 3567899999999888999999987643 222235789999999999999993399999999999999976
No 26
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.41 E-value=6.7e-13 Score=91.25 Aligned_cols=68 Identities=37% Similarity=0.648 Sum_probs=58.7
Q ss_pred CCCceEEEEEEEcCCCCcCEEEec---CCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 37 QGNMKILDIELVKGNKGLGFSIAG---GIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 37 ~~~~~~~~v~L~k~~~glGf~i~g---g~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
+.+++.+.|.|.|...+|||++.+ +.+.+. .+.+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 5 ~~~~~~~~v~l~k~~~glG~~i~~~~~g~~~~~--~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~ 75 (107)
T 1wf8_A 5 SSGLELFPVELEKDEDGLGISIIGMGVGADAGL--EKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVG 75 (107)
T ss_dssp CCCEEEEEEEEECBTTBSCEEEEEEEESCCTTC--CEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBS
T ss_pred cCCceEEEEEEEECCCcccEEEEecCCCCCCCC--CCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCC
Confidence 356788999999988999999998 444321 35789999999999999999999999999999999986
No 27
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.41 E-value=5.8e-13 Score=91.01 Aligned_cols=65 Identities=32% Similarity=0.518 Sum_probs=58.1
Q ss_pred CCCceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 37 QGNMKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 37 ~~~~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
..+++++++.|.|...+|||++.++.+ ...+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 5 ~~~~~~~~v~l~~~~~g~G~~i~~g~~-----~~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~ 69 (103)
T 1uep_A 5 SSGYKELDVHLRRMESGFGFRILGGDE-----PGQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAG 69 (103)
T ss_dssp SSSEEEECCEEESSSSSCCEEECCCCS-----TTSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTT
T ss_pred CCCceEEEEEEEeCCCccCEEEeeecC-----CCCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCC
Confidence 357889999999988999999998764 24679999999999999999999999999999999966
No 28
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.41 E-value=1.3e-12 Score=88.49 Aligned_cols=61 Identities=18% Similarity=0.302 Sum_probs=54.6
Q ss_pred CceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 39 NMKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 39 ~~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
..++++|+|.|...+|||+|.++. ...+||++|.++|+|+++|+|++||+|++|||+++.+
T Consensus 3 ~g~~k~V~l~K~~~~LG~tI~~~g-------~g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g 63 (95)
T 3gge_A 3 KGIEKEVNVYKSEDSLGLTITDNG-------VGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVG 63 (95)
T ss_dssp CEEEEEEEEECCSSCCCEEEECSS-------SSCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTT
T ss_pred CCeEEEEEEEECCCCceEEEEcCC-------CCcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccC
Confidence 347889999999999999999642 2458999999999999999999999999999999988
No 29
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.41 E-value=6.7e-13 Score=92.82 Aligned_cols=69 Identities=26% Similarity=0.455 Sum_probs=59.6
Q ss_pred CCceEEEEEEEcCC-------CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 38 GNMKILDIELVKGN-------KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 38 ~~~~~~~v~L~k~~-------~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
..+..++++|.|.. .+|||+|.++.+.++.....+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 9 ~~~~~~~v~l~r~~~~~~~~~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~ 84 (117)
T 1ujd_A 9 YIFPHARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTS 84 (117)
T ss_dssp CSSCEEEEEECCCSSSSCSSCCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTT
T ss_pred CCCceEEEEEEecCcccCCCCCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCC
Confidence 45577888998887 6899999998876544445689999999999999999999999999999999976
No 30
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.40 E-value=1.3e-12 Score=91.78 Aligned_cols=64 Identities=30% Similarity=0.512 Sum_probs=56.4
Q ss_pred eEEEEEEEcCC-CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 41 KILDIELVKGN-KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 41 ~~~~v~L~k~~-~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.++.|.|.|++ .+|||++.++.+.+. ...+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 24 ~~~~v~l~k~~~~~lGf~i~gg~~~~~--~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~ 88 (118)
T 3b76_A 24 HEKVVNIQKDPGESLGMTVAGGASHRE--WDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTE 88 (118)
T ss_dssp EEEEEEEECCTTCCCCEEEEECSCSTT--CCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGG
T ss_pred CcEEEEEEeCCCCccCEEEecCCCCCC--CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCC
Confidence 56778898886 789999999875432 45789999999999999999999999999999999985
No 31
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.40 E-value=9.9e-13 Score=88.63 Aligned_cols=66 Identities=26% Similarity=0.514 Sum_probs=56.7
Q ss_pred ceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 40 MKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 40 ~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
+++++|+|.|+..+|||++.++.+.+. ....+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 2 ~~~~~v~l~k~~~~lG~~i~~~~~~~~-~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~ 67 (97)
T 2jil_A 2 MRTVEVTLHKEGNTFGFVIRGGAHDDR-NKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLG 67 (97)
T ss_dssp EEEEEEEEECBTTBCSEEEEEECCSCC---CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSS
T ss_pred ceEEEEEEEeCCCccCEEEeCcccCCC-CCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCC
Confidence 467889999988899999999765431 134789999999999999999999999999999999987
No 32
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=99.40 E-value=2.3e-12 Score=88.39 Aligned_cols=68 Identities=25% Similarity=0.500 Sum_probs=59.0
Q ss_pred CCCceEEEEEEEcCC-CCcCEEEecCCCCCCC-CCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 37 QGNMKILDIELVKGN-KGLGFSIAGGIGNQHI-PGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 37 ~~~~~~~~v~L~k~~-~glGf~i~gg~~~~~~-~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
+..+++++|+|.|++ .+|||++.++.+.+.. +...+++|..|.++|||+ +| |++||+|++|||.++.+
T Consensus 3 ~~~~~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~-ag-l~~GD~I~~vng~~v~~ 72 (107)
T 2h2b_A 3 HMIWEQHTVTLHRAPGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE-GQ-LQENDRVAMVNGVSMDN 72 (107)
T ss_dssp CCCEEEEEEEEECBTTTBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTB-TT-BCTTCEEEEETTEECTT
T ss_pred cccceeEEEEEEeCCCCccCEEEecCcCCCcccCCCCCEEEEEECCCCchh-hC-CCCCCEEEEECCEECCC
Confidence 356899999999986 7899999998765432 235789999999999999 88 99999999999999987
No 33
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.39 E-value=3.5e-13 Score=94.46 Aligned_cols=65 Identities=48% Similarity=0.777 Sum_probs=57.0
Q ss_pred ceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 40 MKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 40 ~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.++++|+|.|++.+|||++.++.+.+. .+.+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 24 ~~~~~v~L~k~~~glGf~l~~g~~~~~--~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~ 88 (117)
T 2fne_A 24 PQCKSITLERGPDGLGFSIVGGYGSPH--GDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEG 88 (117)
T ss_dssp CEEEEEEECCBTTBTSEEEEEEEEETT--EEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTT
T ss_pred CccEEEEEEeCCCcccEEEecccCCCC--CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCC
Confidence 378889999999999999999765432 24689999999999999999999999999999999985
No 34
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.39 E-value=2.4e-12 Score=90.69 Aligned_cols=65 Identities=29% Similarity=0.469 Sum_probs=57.9
Q ss_pred CCCceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 37 QGNMKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 37 ~~~~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
+...+.++|+|.|+..+|||++.++.+ ...+++|..|.+++||+++|+|++||+|++|||+++.+
T Consensus 15 ~~~~~~~~v~l~~~~~glG~~~~~g~~-----~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~ 79 (123)
T 1ueq_A 15 QLKGTFLSTTLKKSNMGFGFTIIGGDE-----PDEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLG 79 (123)
T ss_dssp TCCSEEEEEEEECCTTSCSEEEECCSS-----SSCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTT
T ss_pred cCCCcEEEEEEEeCCCceeEEEecccC-----CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCC
Confidence 455689999999998999999998764 24679999999999999999999999999999999984
No 35
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.39 E-value=1.3e-12 Score=86.91 Aligned_cols=60 Identities=28% Similarity=0.479 Sum_probs=54.3
Q ss_pred ceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 40 MKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 40 ~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.+++.|+|.|++.+|||++.++.+ ..+++|..|.++|||+++| |++||+|++|||.++.+
T Consensus 3 ~~~r~v~l~k~~~g~G~~~~~~~~------~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~ 62 (90)
T 2he4_A 3 LRPRLCHLRKGPQGYGFNLHSDKS------RPGQYIRSVDPGSPAARSG-LRAQDRLIEVNGQNVEG 62 (90)
T ss_dssp TCCEEEEEECBTTBCCEEEEECSS------SSSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTT
T ss_pred CCcEEEEEEECCCCccEEEEccCC------CCCEEEEEECCCChHHHCC-CCCCCEEEEECCEECCC
Confidence 467889999999999999998753 3589999999999999999 99999999999999987
No 36
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.38 E-value=8e-13 Score=91.64 Aligned_cols=66 Identities=39% Similarity=0.665 Sum_probs=57.4
Q ss_pred CceEEEEEEEcCCCCcCEEEec---CCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 39 NMKILDIELVKGNKGLGFSIAG---GIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 39 ~~~~~~v~L~k~~~glGf~i~g---g~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
+++.++|+|.|++.+|||++.+ +.+.+ ....+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 2 ~~~~~~v~l~k~~~glG~~l~~~~~~~~~~--~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~ 70 (113)
T 2g5m_B 2 HMELFPVELEKDSEGLGISIIGMGAGADMG--LEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVG 70 (113)
T ss_dssp CCEEEEEECCCCSSCCCCEEEEEECCCCSS--SCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSS
T ss_pred CeEEEEEEEEeCCCCCCEEEEecCCCCcCC--CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC
Confidence 5688899999988999999998 44322 145789999999999999999999999999999999986
No 37
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.38 E-value=3.8e-12 Score=95.23 Aligned_cols=87 Identities=59% Similarity=0.970 Sum_probs=74.0
Q ss_pred hhhccCceeeEEEeecccCCCCCceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEE
Q psy12206 17 IALNVGISKFMYVRRKKVTRQGNMKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKL 96 (164)
Q Consensus 17 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~I 96 (164)
..++.+..+.+.+.|..+..+ .+.++.|.+.+.+|||++.++...+..+...+++|..|.++|||+++|+|++||+|
T Consensus 79 ~~~~~g~~v~l~v~r~~~~~~---~~~~v~l~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~I 155 (196)
T 3gsl_A 79 ALKEAGSIVRLYVMRRKPPAE---KVMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKI 155 (196)
T ss_dssp HHHTSCSEEEEEEEEECCCCE---EEEEEEEEEBTTBSCEEEEESBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEE
T ss_pred HHHhCCCcEEEEEEecCCCcc---ccEEEEEecCCCCceEEEEccCCCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEE
Confidence 455678999999998876544 67788898888899999998776544444578999999999999999999999999
Q ss_pred EEECCeeccC
Q psy12206 97 IAVRNSTSED 106 (164)
Q Consensus 97 l~VNG~~v~~ 106 (164)
++|||.++.+
T Consensus 156 l~Vng~~v~~ 165 (196)
T 3gsl_A 156 LAVNSVGLED 165 (196)
T ss_dssp EEETTEECSS
T ss_pred EEECCCcCCC
Confidence 9999999987
No 38
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.38 E-value=2.4e-12 Score=86.83 Aligned_cols=63 Identities=35% Similarity=0.521 Sum_probs=56.1
Q ss_pred ceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 40 MKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 40 ~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.+.++|+|.|+..+|||++.++.+.+ ..+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 3 g~~~~v~l~~~~~~lG~~l~~~~~~~----~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~ 65 (98)
T 2opg_A 3 GCETTIEISKGRTGLGLSIVGGSDTL----LGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRK 65 (98)
T ss_dssp CEEEEEEEECBTTBTCEEEEECTTST----TCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTT
T ss_pred CCEEEEEEEECCCcccEEEecCCCCC----CCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCC
Confidence 36788999999899999999876543 2589999999999999999999999999999999977
No 39
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.38 E-value=2.3e-12 Score=88.53 Aligned_cols=70 Identities=30% Similarity=0.552 Sum_probs=59.5
Q ss_pred CCCceEEEEEEE--cCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 37 QGNMKILDIELV--KGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 37 ~~~~~~~~v~L~--k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
+.+++.+++.|. +...+|||++.++.+.+......+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 8 ~~~~~~~~v~l~r~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~ 79 (108)
T 2jre_A 8 ASGFSLYSVELFREKDTSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQG 79 (108)
T ss_dssp SSSCEEEEEEEECCSTTSCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTT
T ss_pred ccCcEEEEEEEEecCCCCCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCC
Confidence 456788999995 4558899999998765443345789999999999999999999999999999999976
No 40
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.38 E-value=1.9e-12 Score=86.45 Aligned_cols=62 Identities=40% Similarity=0.687 Sum_probs=54.3
Q ss_pred CceEEEEEEEcCC-CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 39 NMKILDIELVKGN-KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 39 ~~~~~~v~L~k~~-~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.+++++|+|.|.+ .+|||++.++.+ ..+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 2 ~~~~~~v~l~k~~~~~lG~~~~~~~~------~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~ 64 (92)
T 2qg1_A 2 MSDTLTIGLQKKPGKGLGLSIVGKRN------DTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRN 64 (92)
T ss_dssp --CEEEEEEECCTTSCCSEEEECCSS------SCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTT
T ss_pred CceEEEEEEEeCCCCcccEEEEeccC------CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC
Confidence 3578899999976 789999998653 3689999999999999999999999999999999976
No 41
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.38 E-value=2.5e-12 Score=86.38 Aligned_cols=62 Identities=27% Similarity=0.597 Sum_probs=54.8
Q ss_pred CceEEEEEEEcCC--CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 39 NMKILDIELVKGN--KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 39 ~~~~~~v~L~k~~--~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
++++++|.|.|.. .+|||++.++.+ ..+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 1 e~~~~~v~l~k~~~~~~lG~~~~~~~~------~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~ 64 (95)
T 2vwr_A 1 SMEILQVALHKRDSGEQLGIKLVRRTD------EPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKY 64 (95)
T ss_dssp CEEEEEEEEECSSTTCCCCEEEEECSS------SCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTT
T ss_pred CcEEEEEEEEECCCCCcccEEEEeccC------CCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCC
Confidence 3578899999864 679999988654 3589999999999999999999999999999999976
No 42
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.38 E-value=2.1e-12 Score=88.81 Aligned_cols=66 Identities=36% Similarity=0.699 Sum_probs=58.3
Q ss_pred CceEEEEEEEcCCCCcCEEEe-----cCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 39 NMKILDIELVKGNKGLGFSIA-----GGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 39 ~~~~~~v~L~k~~~glGf~i~-----gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
+.++++|+|.|++.+|||++. ++.+... .+.+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 7 ~~~~~~v~l~k~~~~lG~~i~~~~~~gg~~~~~--~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~ 77 (108)
T 1q7x_A 7 PGDIFEVELAKNDNSLGISVTVLFDKGGVNTSV--RHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEG 77 (108)
T ss_dssp SSSEEEEEEESSSCSCCEEESSSSSSBCBCTTS--SSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBS
T ss_pred CCcEEEEEEEECCCCccEEEEEeccCCCccccC--CCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCC
Confidence 457889999999899999999 7766543 35789999999999999999999999999999999985
No 43
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.37 E-value=8.3e-13 Score=91.16 Aligned_cols=64 Identities=41% Similarity=0.704 Sum_probs=56.4
Q ss_pred ceEEEEEEEcCC-CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 40 MKILDIELVKGN-KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 40 ~~~~~v~L~k~~-~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.++++|.|.|.+ .+|||++.++.+.+ ...+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 4 ~~~~~v~l~k~~~~~lG~~i~g~~~~~---~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~ 68 (108)
T 3cbz_A 4 MNIITVTLNMEKYNFLGISIVGQSNER---GDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFEN 68 (108)
T ss_dssp CCEEEEEECHHHHCCCCEEEEEECSST---TCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTS
T ss_pred ceEEEEEEEeCCCCccCEEEEcCcCCC---CCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCC
Confidence 478889998765 88999999976532 35789999999999999999999999999999999987
No 44
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.37 E-value=2.1e-12 Score=85.01 Aligned_cols=59 Identities=25% Similarity=0.574 Sum_probs=52.4
Q ss_pred EEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 43 LDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 43 ~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.+++|.|++.+|||++.++.+ ...+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 2 ~~v~l~k~~~g~G~~i~~~~~-----~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~ 60 (85)
T 2i04_A 2 IHTKLRKSSRGFGFTVVGGDE-----PDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLG 60 (85)
T ss_dssp EEEEEECBTTBSSEEEEECCS-----TTBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTT
T ss_pred EEEEEEECCCCCCEEEEcccC-----CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCC
Confidence 468888988999999998654 24679999999999999999999999999999999975
No 45
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.36 E-value=2.1e-12 Score=89.32 Aligned_cols=65 Identities=29% Similarity=0.569 Sum_probs=56.2
Q ss_pred CCceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 38 GNMKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 38 ~~~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.+.+.+.++|.|+ .+|||++.++.+.+. ..+++|..|.+++||+++|+|++||+|++|||.++.+
T Consensus 12 ~~~~~~~v~l~k~-~glG~~i~gg~~~~~---~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~ 76 (109)
T 1wi4_A 12 RDPAFRVITVTKE-TGLGLKILGGINRNE---GPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIG 76 (109)
T ss_dssp CCTTEEEEEECCS-SCCCEEEEECSSSSS---CSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTT
T ss_pred CCCcEEEEEEeCC-CccCEEEEeccCCCC---CCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCC
Confidence 3446788899885 899999999876542 3479999999999999999999999999999999986
No 46
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.36 E-value=1.6e-12 Score=89.48 Aligned_cols=60 Identities=68% Similarity=1.161 Sum_probs=51.8
Q ss_pred EEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 47 LVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 47 L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
+..+..+|||+|.||.+.+..+.+.+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 8 ~~~~~~~~Gf~i~gG~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~ 67 (106)
T 4amh_A 8 VPRGSKGLGFSIAGGVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEE 67 (106)
T ss_dssp ----CCCSCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSS
T ss_pred CCCCCCccCEEEEeccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCC
Confidence 444568899999999988766667799999999999999999999999999999999976
No 47
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.36 E-value=1.6e-12 Score=89.06 Aligned_cols=66 Identities=38% Similarity=0.679 Sum_probs=55.7
Q ss_pred CCceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 38 GNMKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 38 ~~~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.+.++++|+| |...+|||++.++.+... ...+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 8 ~~~~~~~v~l-~~~~glG~~i~~~~~~~~--~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~ 73 (106)
T 3axa_A 8 KEPEIITVTL-KKQNGMGLSIVAAKGAGQ--DKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVG 73 (106)
T ss_dssp --CCEEEEEE-ECSSSCSEEEEEEECSSC--SSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTT
T ss_pred CCceEEEEEE-CCCCccCEEEEeecCCCC--CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC
Confidence 3457788888 878999999998654432 35789999999999999999999999999999999986
No 48
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.36 E-value=2.2e-12 Score=87.94 Aligned_cols=63 Identities=32% Similarity=0.628 Sum_probs=55.8
Q ss_pred CCceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 38 GNMKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 38 ~~~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
...++++|+|.|++.+|||++.++.+ ..+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 8 ~~~~~~~v~l~k~~~glG~~~~~~~~------~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~ 70 (104)
T 3i4w_A 8 IPREPRRIVIHRGSTGLGFNIVGGEX------GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRN 70 (104)
T ss_dssp CCSSCEEEEEECBTTBTSEEEEECC-------CCCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTT
T ss_pred CCCccEEEEEEeCCCccCEEEECCCC------CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCC
Confidence 34578889999998899999998753 2589999999999999999999999999999999966
No 49
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.36 E-value=3.6e-12 Score=85.76 Aligned_cols=66 Identities=35% Similarity=0.666 Sum_probs=56.6
Q ss_pred ceEEEEEEEcCCCCcCEEEecCCCCC-CCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 40 MKILDIELVKGNKGLGFSIAGGIGNQ-HIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 40 ~~~~~v~L~k~~~glGf~i~gg~~~~-~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
++..++.+.+...+|||++.++.+.+ +.....+++|..|.++|||+++| |++||+|++|||.++.+
T Consensus 2 ~~~~~v~~~~~~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~ 68 (97)
T 2w4f_A 2 MEELTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQG 68 (97)
T ss_dssp -CEEEEEEECBTTBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTT
T ss_pred ceEEEEEEEeCCCceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCC
Confidence 46778899888899999999887643 22345789999999999999999 99999999999999987
No 50
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=99.36 E-value=5.6e-12 Score=84.64 Aligned_cols=62 Identities=39% Similarity=0.644 Sum_probs=53.1
Q ss_pred EEEEEEEcCCCCcCEEEecCCC---CCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 42 ILDIELVKGNKGLGFSIAGGIG---NQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 42 ~~~v~L~k~~~glGf~i~gg~~---~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.++|++.+++ +|||+|.++.+ .|+.+...+++|..|.++|||++ | |++||+|++|||.++.+
T Consensus 4 ~~~v~l~~~~-~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~ 68 (95)
T 1mfg_A 4 EIRVRVEKDP-ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFIN 68 (95)
T ss_dssp EEEEEEECSS-SCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTT
T ss_pred EEEEEECCCC-CCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-C-CCCCCEEEEECCEEcCC
Confidence 4567787765 89999999764 45555678999999999999999 8 99999999999999977
No 51
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.36 E-value=6.8e-12 Score=86.49 Aligned_cols=71 Identities=31% Similarity=0.578 Sum_probs=60.5
Q ss_pred CCCCCceEEEEEEEcCCCCcCEEEecCCCCC-CCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 35 TRQGNMKILDIELVKGNKGLGFSIAGGIGNQ-HIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 35 ~~~~~~~~~~v~L~k~~~glGf~i~gg~~~~-~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
+...+.+.+.+.|.+...+|||++.++.+.+ +.....+++|..|.++|||+++| |++||+|++|||.++.+
T Consensus 9 ~~~~~~~~~~~~l~~~~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~ 80 (110)
T 1x5q_A 9 PARIEEEELTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQG 80 (110)
T ss_dssp CCCCCCEEEEEEEECSSSSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTT
T ss_pred cccCCcceEEEEEecCCCeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCC
Confidence 3456678888999998899999999887642 22245789999999999999999 99999999999999987
No 52
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.35 E-value=2.7e-12 Score=89.04 Aligned_cols=63 Identities=30% Similarity=0.722 Sum_probs=55.7
Q ss_pred CceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 39 NMKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 39 ~~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
+.++++++|.|+..+|||++.++.+ ...+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 22 ~~~~~~v~l~~~~~glG~~l~~~~~-----~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~ 84 (112)
T 2r4h_A 22 SMDFYTVELERGAKGFGFSLRGGRE-----YNMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKN 84 (112)
T ss_dssp -CCEEEEEEECBTTBTSEEEEECGG-----GTCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTT
T ss_pred CCceEEEEEEcCCCccCEEEecccc-----CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCC
Confidence 3578889999988899999998754 24689999999999999999999999999999999976
No 53
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.35 E-value=5.3e-12 Score=84.04 Aligned_cols=61 Identities=30% Similarity=0.609 Sum_probs=54.2
Q ss_pred CceEEEEEEEcCC--CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 39 NMKILDIELVKGN--KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 39 ~~~~~~v~L~k~~--~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
+.++++++|.|.+ .+|||++.++.. ..+++|..|.++|||+++| |++||+|++|||.++.+
T Consensus 4 ~~~~~~v~l~k~~~~~~~G~~~~~~~~------~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~ 66 (91)
T 1m5z_A 4 PVELHKVTLYKDSGMEDFGFSVADGLL------EKGVYVKNIRPAGPGDLGG-LKPYDRLLQVNHVRTRD 66 (91)
T ss_dssp CCEEEEEEEECCTTCSSSSEEEEECTT------SSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTT
T ss_pred CcceEEEEEEECCCCCCccEEEEeccC------CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCC
Confidence 4588999999876 479999998753 3689999999999999999 99999999999999987
No 54
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.35 E-value=3.2e-12 Score=90.17 Aligned_cols=65 Identities=34% Similarity=0.513 Sum_probs=58.0
Q ss_pred CCceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 38 GNMKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 38 ~~~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.+.+.++|.|.|+..+|||++.++.+.+ ..+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 22 ~~~~~~~v~l~k~~~glG~~l~~~~~~~----~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~ 86 (124)
T 2daz_A 22 LPGELHIIELEKDKNGLGLSLAGNKDRS----RMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYG 86 (124)
T ss_dssp SSSEEEEEEEECCSSCCCEEEECBSSTT----SCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTT
T ss_pred CCCceEEEEEEeCCCccCEEEeccCCCC----cCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC
Confidence 4458889999999899999999986543 3689999999999999999999999999999999976
No 55
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.35 E-value=2.1e-12 Score=86.27 Aligned_cols=61 Identities=36% Similarity=0.660 Sum_probs=53.8
Q ss_pred eEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 41 KILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 41 ~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.+++|+|.|...+|||++.++.+ ...+++|..|.++|||+++|.|++||+|++|||.++.+
T Consensus 5 ~~r~v~l~k~~~glG~~l~~~~~-----~~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~ 65 (93)
T 2dkr_A 5 SSGVVELPKTDEGLGFNIMGGKE-----QNSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEG 65 (93)
T ss_dssp CSCEEEEECCTTCCCEEEECSSS-----SSCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTT
T ss_pred CCEEEEEEeCCCCccEEEecccC-----CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC
Confidence 56779999988999999998764 24689999999999999995599999999999999985
No 56
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.34 E-value=4.3e-12 Score=94.59 Aligned_cols=69 Identities=38% Similarity=0.642 Sum_probs=58.3
Q ss_pred CCceEEEEEEEcCCCCcCEEEec-CCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 38 GNMKILDIELVKGNKGLGFSIAG-GIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 38 ~~~~~~~v~L~k~~~glGf~i~g-g~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.+.+.++|+|.|+..||||+|.+ +.+.+....+.+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 77 ~~~~~~~v~l~k~~~glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~ 146 (170)
T 3egg_C 77 ERLELFPVELEKDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVG 146 (170)
T ss_dssp TTSEEEEEEEECBTTBSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTT
T ss_pred CCceEEEEEEEeCCCeEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCC
Confidence 35678899999999999999998 3233222245789999999999999999999999999999999976
No 57
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.34 E-value=2.7e-12 Score=89.56 Aligned_cols=68 Identities=28% Similarity=0.560 Sum_probs=58.4
Q ss_pred CCCceEEEEEEEcCC-CCcCEEEecCCCCCCCC-CCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 37 QGNMKILDIELVKGN-KGLGFSIAGGIGNQHIP-GDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 37 ~~~~~~~~v~L~k~~-~glGf~i~gg~~~~~~~-~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
+..+++++|+|.|++ .+|||++.++.+.+... ...+++|..|.+++||+ +| |++||+|++|||.++.+
T Consensus 10 ~~~~~~~~v~l~k~~~~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~-~g-L~~GD~I~~Vng~~v~~ 79 (117)
T 2csj_A 10 EVIWEQYTVTLQKDSKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD-GL-LQENDRVVMVNGTPMED 79 (117)
T ss_dssp CEEEEEEEEEEECCSSSTTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHH-HH-BCTTCEEEEESSCBCBT
T ss_pred cccceEEEEEEEECCCCccCEEEeCCcCCccccCCCCCEEEEEECCCCccc-cc-CCCCCEEEEECCEECCC
Confidence 456789999999987 79999999988765421 35789999999999997 77 99999999999999987
No 58
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.34 E-value=2.1e-12 Score=86.95 Aligned_cols=62 Identities=32% Similarity=0.516 Sum_probs=54.2
Q ss_pred eEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 41 KILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 41 ~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.+++|+|.|++.+|||++.+..+.+ ...+++|..|.++|||+++| |++||+|++|||.++.+
T Consensus 3 ~~r~v~l~k~~~~~G~~l~~~~~~~---~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~ 64 (96)
T 2v90_A 3 KPRCLHLEKGPQGFGFLLREEKGLD---GRPGQFLWEVDPGLPAKKAG-MQAGDRLVAVAGESVEG 64 (96)
T ss_dssp CCEEEEEECBTTBSCEEEEEEECTT---SCEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTT
T ss_pred CCEEEEEEeCCCcccEEEEeccCCC---CCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCC
Confidence 6788999999999999998844322 34689999999999999999 99999999999999987
No 59
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.33 E-value=5.4e-12 Score=89.44 Aligned_cols=72 Identities=32% Similarity=0.590 Sum_probs=60.9
Q ss_pred CCCCCceEEEEEEEc-CCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 35 TRQGNMKILDIELVK-GNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 35 ~~~~~~~~~~v~L~k-~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
..+.++++++|.|.+ ...+|||++.++.+.+......+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 9 ~~~~~~~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~ 81 (129)
T 2dmz_A 9 SDSSLFETYNVELVRKDGQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQG 81 (129)
T ss_dssp CSSCCEEEEEEEECCCTTCCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTT
T ss_pred CCCCCCcEEEEEEEeCCCCCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCC
Confidence 345678899999966 457899999997765443345789999999999999999999999999999999987
No 60
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.33 E-value=2.7e-12 Score=84.97 Aligned_cols=59 Identities=20% Similarity=0.445 Sum_probs=51.9
Q ss_pred eEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 41 KILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 41 ~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.+++|+| +++.+|||++.++.+ ...+++|..|.++|||+++| |++||+|++|||.++.+
T Consensus 3 ~~~~v~l-~~~~~~G~~l~~g~~-----~~~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~ 61 (88)
T 2uzc_A 3 SNYSVSL-VGPAPWGFRLQGGKD-----FNMPLTISSLKDGGKAAQAN-VRIGDVVLSIDGINAQG 61 (88)
T ss_dssp CEEEEEE-ESSSCCCEEEEEEGG-----GTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTT
T ss_pred cEEEEEE-cCCCcccEEEECcCC-----CCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCC
Confidence 4677888 677899999998764 23679999999999999999 99999999999999987
No 61
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.33 E-value=9.5e-13 Score=92.65 Aligned_cols=67 Identities=33% Similarity=0.645 Sum_probs=52.4
Q ss_pred CCceEEEEEEEcCC-CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 38 GNMKILDIELVKGN-KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 38 ~~~~~~~v~L~k~~-~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
...++++|.|.|++ .+|||++.++.+.+. ...+++|..|.++|||+++|.|++||+|++|||.++.+
T Consensus 21 ~~~~~~~v~l~k~~~~~lGf~i~gg~~~~~--~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~ 88 (120)
T 2iwo_A 21 QSMGLRTVEMKKGPTDSLGISIAGGVGSPL--GDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEG 88 (120)
T ss_dssp ----CEEEEEEC----CCCEEEEEEEEETT--EEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTT
T ss_pred CCCCcEEEEEEcCCCCCCCEEEecccCCCC--CCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCC
Confidence 34578889999988 599999999865432 24689999999999999994499999999999999987
No 62
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.33 E-value=6.4e-12 Score=87.60 Aligned_cols=69 Identities=22% Similarity=0.333 Sum_probs=58.0
Q ss_pred CCceEEEEEEEcCC-CCcCEEEecCCCCCCC----CCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 38 GNMKILDIELVKGN-KGLGFSIAGGIGNQHI----PGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 38 ~~~~~~~v~L~k~~-~glGf~i~gg~~~~~~----~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
...++++|.|.|++ .+|||+|.++.+.+.. ....+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 12 ~~~~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~ 85 (117)
T 2ehr_A 12 HWGPPRIVEIFREPNVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQN 85 (117)
T ss_dssp CBCCCEEEEECCCSSSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTT
T ss_pred cCCCCEEEEEEeCCCCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCC
Confidence 34468889999986 7899999998764321 124689999999999999999999999999999999976
No 63
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.33 E-value=2.4e-12 Score=88.27 Aligned_cols=62 Identities=26% Similarity=0.366 Sum_probs=53.4
Q ss_pred eEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 41 KILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 41 ~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
..+.|.|.|...+|||+|.++.+... ..++|..|.+++||+++|+|++||+|++|||.++.+
T Consensus 6 ~~~~v~l~k~~~glG~~i~gg~~~~~----~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~ 67 (103)
T 1ufx_A 6 SGTLVRVKKSAATLGIAIEGGANTRQ----PLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRG 67 (103)
T ss_dssp SSEEEEEECCSSSCCEEEECBTTSSC----SSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTT
T ss_pred ceEEEEEEcCCCcCCeEEECCCCCCC----CcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCC
Confidence 35678888888999999999876421 335999999999999999999999999999999976
No 64
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.33 E-value=5.6e-12 Score=90.10 Aligned_cols=72 Identities=25% Similarity=0.329 Sum_probs=58.1
Q ss_pred cCCCCCceEEEEEEEcCC-CCcCEEEecCCCCC-------CCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeecc
Q psy12206 34 VTRQGNMKILDIELVKGN-KGLGFSIAGGIGNQ-------HIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSE 105 (164)
Q Consensus 34 ~~~~~~~~~~~v~L~k~~-~glGf~i~gg~~~~-------~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~ 105 (164)
|.+....+.++++|.|.. .+|||+|.++.+.. ......+++|..|.++|||+++| |++||+|++|||.++.
T Consensus 20 ~~s~~~~~~r~v~l~r~~~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~ 98 (132)
T 3l4f_D 20 SGSDYIIKEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVV 98 (132)
T ss_dssp CSCCCCCCCCEEEEECCTTSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGT-CCTTCEEEEESSSBCT
T ss_pred CCCCcCCCCEEEEEEECCCCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECC
Confidence 344455678889999865 78999999987532 11123479999999999999999 9999999999999998
Q ss_pred C
Q psy12206 106 D 106 (164)
Q Consensus 106 ~ 106 (164)
+
T Consensus 99 ~ 99 (132)
T 3l4f_D 99 K 99 (132)
T ss_dssp T
T ss_pred C
Confidence 6
No 65
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.32 E-value=4e-12 Score=90.33 Aligned_cols=67 Identities=24% Similarity=0.499 Sum_probs=58.7
Q ss_pred CCCCCceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 35 TRQGNMKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 35 ~~~~~~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
+.+...+.++++|.|+..+|||++.++.+ ...+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 12 ~~~~~g~~~~v~l~~~~~g~G~~i~g~~~-----~~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~ 78 (129)
T 2kpk_A 12 PSELKGKFIHTKLRKSSRGFGFTVVGGDE-----PDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLG 78 (129)
T ss_dssp TTTSCSEEEEEEEEECSSCCSEEEEEEEE-----TTEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTT
T ss_pred chhcCCcEEEEEEEECCCcccEEEeCccC-----CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCC
Confidence 44556688899999988999999998654 23679999999999999999999999999999999985
No 66
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.32 E-value=3.2e-12 Score=87.26 Aligned_cols=66 Identities=30% Similarity=0.590 Sum_probs=57.3
Q ss_pred CCceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 38 GNMKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 38 ~~~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.+.+.+++.|.+...+|||++.++.+.+ ...+++|..|.+++||+++|+|++||+|++|||.++.+
T Consensus 8 ~~~~~~~v~l~~~~~g~G~~l~~~~~~~---~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~ 73 (104)
T 2djt_A 8 QASGHFSVELVRGYAGFGLTLGGGRDVA---GDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQG 73 (104)
T ss_dssp SCCCCEEEEEECCSSSCCEEEECCEETT---EECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTT
T ss_pred CCCceEEEEEEeCCCCccEEEEeccCCC---CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC
Confidence 4457788999998899999999876431 24679999999999999999999999999999999977
No 67
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.32 E-value=3e-12 Score=85.13 Aligned_cols=61 Identities=31% Similarity=0.457 Sum_probs=52.8
Q ss_pred eEEEEEEEcCC-CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 41 KILDIELVKGN-KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 41 ~~~~v~L~k~~-~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
++++|+|.|.+ .+|||++.++.+ ...+++|..|.++|||+++|.|++||+|++|||.++.+
T Consensus 4 ~~~~v~l~k~~~~~lG~~i~~~~~-----~~~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~ 65 (90)
T 1qav_A 4 QRRRVTVRKADAGGLGISIKGGRE-----NKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSS 65 (90)
T ss_dssp SCEEEEEECCTTTCCCEEEEEEGG-----GTEEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTT
T ss_pred ccEEEEEEeCCCCCcCEEEEcccC-----CCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCC
Confidence 57889999965 789999998754 23689999999999999993399999999999999976
No 68
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.32 E-value=4.3e-12 Score=85.63 Aligned_cols=66 Identities=27% Similarity=0.495 Sum_probs=55.2
Q ss_pred eEEEEEEEc-CCCCcCEEEecCCCCCCC-CCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 41 KILDIELVK-GNKGLGFSIAGGIGNQHI-PGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 41 ~~~~v~L~k-~~~glGf~i~gg~~~~~~-~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.+++++|.| ...+|||++.++.+.+.. +...+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 5 ~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~ 72 (98)
T 1ihj_A 5 LIHMVTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRN 72 (98)
T ss_dssp EEEEEEEECTTSSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTT
T ss_pred eEEEEEEEeCCCCCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC
Confidence 467799999 458899999988754321 123589999999999999999999999999999999977
No 69
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.32 E-value=5.5e-12 Score=86.26 Aligned_cols=63 Identities=32% Similarity=0.511 Sum_probs=55.5
Q ss_pred CCceEEEEEEEcCC-CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 38 GNMKILDIELVKGN-KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 38 ~~~~~~~v~L~k~~-~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
..+.+++|+|.|.+ .+|||++.++.+ ...+++|..|.+++||+++| |++||+|++|||.++.+
T Consensus 12 ~~~~~~~v~l~k~~~~~lG~~~~~~~~-----~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~ 75 (104)
T 1wi2_A 12 TQFLPRIVTLKKPPGAQLGFNIRGGKA-----SQLGIFISKVIPDSDAHRAG-LQEGDQVLAVNDVDFQD 75 (104)
T ss_dssp CSSCCEEEEECCCTTCCCSEEEECCSS-----SCCCCEEEEECTTSHHHHHT-CCTTCEEEEETTEECSS
T ss_pred CCCCCEEEEEEeCCCCCccEEEEcccC-----CCCCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCC
Confidence 34578899999987 789999998754 23689999999999999999 99999999999999987
No 70
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.31 E-value=3.5e-12 Score=86.81 Aligned_cols=62 Identities=26% Similarity=0.421 Sum_probs=55.3
Q ss_pred CCceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 38 GNMKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 38 ~~~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.++++++|+|.|+..+|||++.+..+ ..+++|..|.++|||+++| |++||+|++|||.++.+
T Consensus 3 ~~~~~r~v~l~k~~~g~G~~l~~~~~------~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~ 64 (102)
T 2d90_A 3 SGSSGRVVVIKKGSNGYGFYLRAGPE------QKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEA 64 (102)
T ss_dssp SCSSSEEEEEECCSSSSSCEEEECSS------SSSEEEECCCTTSTTTTTT-CCTTCEEEEESSCBCTT
T ss_pred CCCCCEEEEEeeCCCCccEEEEeecC------CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCC
Confidence 45678889999999999999998542 3689999999999999999 99999999999999987
No 71
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.31 E-value=8.5e-12 Score=84.04 Aligned_cols=65 Identities=25% Similarity=0.432 Sum_probs=52.3
Q ss_pred eEEEEEEEcCC-CCcCEEEec-CCCC-CCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 41 KILDIELVKGN-KGLGFSIAG-GIGN-QHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 41 ~~~~v~L~k~~-~glGf~i~g-g~~~-~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
++++|+|.|.+ .+|||++.+ +... .......+++|..|.++|||+++| |++||+|++|||.++.+
T Consensus 4 ~~r~v~l~k~~~~~~Gf~l~~~g~~~~~~~~~~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~ 71 (96)
T 2ego_A 4 QRKVLTLEKGDNQTFGFEIQTYGLHHREEQRVEMVTFVARVHESSPAQLAG-LTPGDTIASVNGLNVEG 71 (96)
T ss_dssp CEEEEEEECCTTCCCSEEEEEEEC-------CCEEEEEEEECTTCHHHHTT-CCTTCEEEEETTEECTT
T ss_pred ccEEEEEEeCCCCCccEEEEeccccccCCCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCC
Confidence 67889999988 689999997 1110 000124689999999999999999 99999999999999977
No 72
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.31 E-value=6.8e-12 Score=83.98 Aligned_cols=60 Identities=38% Similarity=0.519 Sum_probs=53.4
Q ss_pred eEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 41 KILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 41 ~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.++.++|.|++.+|||++.++. ...+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 4 ~~r~v~l~k~~~~lG~~i~~~~------~~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~ 63 (93)
T 3o46_A 4 SVKIIRLVKNREPLGATIKKDE------QTGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVED 63 (93)
T ss_dssp CCEEEEEEESSSCCCEEEEECT------TTCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTT
T ss_pred cEEEEEEEeCCCCccEEEEecC------CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC
Confidence 5677899998889999999862 24689999999999999999999999999999999955
No 73
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.31 E-value=1.7e-12 Score=89.71 Aligned_cols=66 Identities=36% Similarity=0.594 Sum_probs=56.5
Q ss_pred eEEEEEEEcCC-CCcCEEEecCCC----CCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 41 KILDIELVKGN-KGLGFSIAGGIG----NQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 41 ~~~~v~L~k~~-~glGf~i~gg~~----~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
..++|.|.|.+ .+|||++.++.+ .++.....+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 9 ~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~ 79 (111)
T 1uju_A 9 GLRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLG 79 (111)
T ss_dssp SSSCEEEECCTTCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTT
T ss_pred ccEEEEEEECCCCccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC
Confidence 56678898987 789999999874 2333346789999999999999999999999999999999985
No 74
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.31 E-value=9.7e-12 Score=83.85 Aligned_cols=62 Identities=26% Similarity=0.476 Sum_probs=54.0
Q ss_pred ceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 40 MKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 40 ~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.+.++|+|.+...+|||++.++.+ ...+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 4 ~~~~~v~l~~~~~~lG~~i~~~~~-----~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~ 65 (97)
T 1n7e_A 4 AIIYTVELKRYGGPLGITISGTEE-----PFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKG 65 (97)
T ss_dssp CCEEEEEEECTTSCCCEEEECCSS-----TTSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTT
T ss_pred ceEEEEEEEeCCCCcCEEEEcccC-----CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCC
Confidence 467889998877889999998653 23579999999999999999999999999999999975
No 75
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.30 E-value=3.5e-12 Score=84.25 Aligned_cols=60 Identities=37% Similarity=0.591 Sum_probs=52.0
Q ss_pred eEEEEEEEcCC-CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhh-cCCCCCCCEEEEECCeeccC
Q psy12206 41 KILDIELVKGN-KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQV-DGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 41 ~~~~v~L~k~~-~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~-~G~L~~GD~Il~VNG~~v~~ 106 (164)
++++++|.|.+ .+|||++.++.+. ..+++|..|.++|||++ +| |++||+|++|||.++.+
T Consensus 2 ~~~~v~l~~~~~~~lG~~i~~~~~~-----~~~~~V~~V~~gspA~~~ag-l~~GD~I~~vng~~v~~ 63 (87)
T 4e34_A 2 PIRKVLLLKEDHEGLGISITGGKEH-----GVPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRD 63 (87)
T ss_dssp CCEEEEEECCTTBCCCEEEEEEGGG-----TEEEEEEEECTTSHHHHHSC-CCTTEEEEEETTEECTT
T ss_pred CEEEEEEEECCCCcccEEEEccCCC-----CCCEEEEEECCCCHHHhcCC-CCCCCEEEEECCEECCC
Confidence 46778999976 5899999987642 35799999999999999 58 99999999999999976
No 76
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.30 E-value=4.5e-12 Score=83.27 Aligned_cols=58 Identities=22% Similarity=0.434 Sum_probs=50.3
Q ss_pred EEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 42 ILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 42 ~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
+++|+| +++.+|||++.++.+. ..+++|..|.++|||+++| |++||+|++|||.++.+
T Consensus 2 ~~~v~l-~~~~~~G~~l~gg~~~-----~~~v~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~ 59 (85)
T 1rgw_A 2 AYSVTL-TGPGPWGFRLQGGKDF-----NMPLTISRITPGSKAAQSQ-LSQGDLVVAIDGVNTDT 59 (85)
T ss_dssp EEEEEE-CCSSCCCEEECCCGGG-----TSCCBEEEECTTSHHHHSS-CCCCSBEEEETTEECTT
T ss_pred cEEEEE-eCCCccCEEEEeccCC-----CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCC
Confidence 456778 5668899999987652 3578999999999999999 99999999999999987
No 77
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.30 E-value=3.6e-12 Score=85.46 Aligned_cols=60 Identities=27% Similarity=0.449 Sum_probs=52.8
Q ss_pred ceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 40 MKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 40 ~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.+++.++|.|+..+|||++.++.+ ..+++|..|.++|||+++| |++||+|++|||.++.+
T Consensus 4 ~~~r~v~l~~~~~~~G~~l~~~~~------~~~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~ 63 (95)
T 3r68_A 4 HQPRVVVIKKGSNGYGFYLRAGPE------QKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEA 63 (95)
T ss_dssp CCCEEEEEECBTTBCSCEEEEC--------CCSEEEECCCTTSHHHHHT-CCTTEEEEEETTEECTT
T ss_pred CCcEEEEEecCCCcccEEEEecCC------CCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCC
Confidence 467789999988999999998653 2489999999999999999 99999999999999987
No 78
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=99.30 E-value=4.9e-12 Score=86.22 Aligned_cols=66 Identities=36% Similarity=0.582 Sum_probs=56.2
Q ss_pred CCceEEEEEEEcCCCCcCEEEecCCC---CCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 38 GNMKILDIELVKGNKGLGFSIAGGIG---NQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 38 ~~~~~~~v~L~k~~~glGf~i~gg~~---~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
..++..++.+.|++ +|||++.++.+ .|+.....+++|..|.++|||++ | |++||+|++|||.++.+
T Consensus 8 ~~~~~~~v~l~~~~-~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~ 76 (103)
T 1n7t_A 8 LAKQEIRVRVEKDP-ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFIN 76 (103)
T ss_dssp SSCCCEEEEEECSS-CCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-S-CCTTCEEEEETTEECSS
T ss_pred cccEEEEEEEccCC-CccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-C-CCCCCEEEEECCEECCC
Confidence 45677889998865 89999999764 44444567999999999999999 8 99999999999999976
No 79
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.30 E-value=1.8e-11 Score=84.41 Aligned_cols=68 Identities=43% Similarity=0.593 Sum_probs=58.2
Q ss_pred CCCceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 37 QGNMKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 37 ~~~~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
+.+.+.+.+.|.++..+|||++.+..+... ...+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 7 ~~~~~~~~~~l~~~~~glG~~~~~~~~~~~--~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~ 74 (111)
T 2koj_A 7 KKVGKRLNIQLKKGTEGLGFSITSRDVTIG--GSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAG 74 (111)
T ss_dssp SSSCEEEEEEEECBTTBTCEEEEECSCSSS--SSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTT
T ss_pred cccCcEEEEEEEECCCccCEEEEeccCCCC--CCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCC
Confidence 345688889999988999999998754321 34689999999999999999999999999999999966
No 80
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.30 E-value=5.7e-12 Score=83.19 Aligned_cols=53 Identities=19% Similarity=0.317 Sum_probs=47.7
Q ss_pred eEEEEEEEcCCC-CcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 41 KILDIELVKGNK-GLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 41 ~~~~v~L~k~~~-glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
++++|+|.|++. +|||++.++ +|..+.+++||+++| |++||+|++|||+++.+
T Consensus 4 ~~r~v~l~k~~~g~~Gf~i~~g------------~I~~v~~gspA~~aG-l~~GD~Il~VNG~~v~~ 57 (82)
T 1r6j_A 4 DPRTITMHKDSTGHVGFIFKNG------------KITSIVKDSSAARNG-LLTEHNICEINGQNVIG 57 (82)
T ss_dssp CCEEEEEECCTTSCCCEEEETT------------EEEEECTTSHHHHHT-CCSSEEEEEETTEECTT
T ss_pred ceEEEEEEECCCCCeEEEEECC------------EEEEecCCCHHHHcC-CCCCCEEEEECCEEcCC
Confidence 578899999885 699999864 478999999999999 99999999999999987
No 81
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.30 E-value=5.9e-12 Score=83.56 Aligned_cols=60 Identities=23% Similarity=0.473 Sum_probs=51.5
Q ss_pred ceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 40 MKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 40 ~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
+++.++++. ++.+|||++.++.+ ...+++|..|.++|||+++| |++||+|++|||.++.+
T Consensus 2 ~~~~~v~~~-~~~~~G~~l~gg~~-----~~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~ 61 (89)
T 2q3g_A 2 MDSFKVVLE-GPAPWGFRLQGGKD-----FNVPLSISRLTPGGKAAQAG-VAVGDWVLSIDGENAGS 61 (89)
T ss_dssp EEEEEEEEE-SSSCCCEEEEEEGG-----GTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGG
T ss_pred ccEEEEEEc-CCCcccEEEECcCC-----CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCC
Confidence 356778885 46889999998764 23679999999999999999 99999999999999985
No 82
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=99.30 E-value=1.1e-11 Score=83.63 Aligned_cols=60 Identities=20% Similarity=0.413 Sum_probs=53.1
Q ss_pred ceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 40 MKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 40 ~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
+.++.+.|.+...+|||++.++.+ ..+++|..|.++|||+++| |++||+|++|||.++.+
T Consensus 8 ~~~~~~~l~~~~~g~G~~~~~~~~------~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~ 67 (98)
T 2jxo_A 8 LRPRLCTMKKGPSGYGFNLHSDKS------KPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEG 67 (98)
T ss_dssp SCCEEEEEECTTTCCCEEEECCCS------SSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTT
T ss_pred CCcEEEEEEeCCCcccEEEEecCC------CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCC
Confidence 456778899988999999988653 3589999999999999999 99999999999999976
No 83
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.29 E-value=1.5e-11 Score=86.72 Aligned_cols=64 Identities=23% Similarity=0.367 Sum_probs=56.1
Q ss_pred CCceEEEEEEEcCC-CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 38 GNMKILDIELVKGN-KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 38 ~~~~~~~v~L~k~~-~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
....+++++|.|.. .+|||++.++.+ ...+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 16 ~~~~~~~v~l~k~~~~~lG~~i~gg~~-----~~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~ 80 (125)
T 3hpk_A 16 IPTVPGKVTLQKDAQNLIGISIGGGAQ-----YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKG 80 (125)
T ss_dssp CCEEEEEEEEECCTTSCCCEEEEECSS-----CCSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTT
T ss_pred CcCCCeEEEEEeCCCCCcCEEEeccCC-----CCCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCC
Confidence 34578889999876 679999999865 23689999999999999999999999999999999985
No 84
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=99.29 E-value=7.1e-12 Score=87.57 Aligned_cols=64 Identities=31% Similarity=0.628 Sum_probs=57.4
Q ss_pred CCCceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 37 QGNMKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 37 ~~~~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
+..+++++|.|.|...+|||++.++.+ ..+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 10 ~~~~~~~~v~l~k~~~glG~~l~~~~~------~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~ 73 (119)
T 1tp5_A 10 DIPREPRRIVIHRGSTGLGFNIVGGED------GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRN 73 (119)
T ss_dssp CCCCSCEEEEEECTTSCCCEEEEECGG------GCCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTT
T ss_pred CCCCccEEEEEEECCCCccEEEecCCC------CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC
Confidence 456788999999988999999998653 2689999999999999999999999999999999987
No 85
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.29 E-value=1e-11 Score=82.80 Aligned_cols=56 Identities=27% Similarity=0.504 Sum_probs=51.1
Q ss_pred eEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 41 KILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 41 ~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
++++|+|.|+..+|||.+.+. .+++|..|.++|||+++| |++||+|++|||.++.+
T Consensus 3 ~~r~v~l~~~~~g~G~~l~~~---------~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~ 58 (91)
T 2f5y_A 3 RYRQITIPRGKDGFGFTICCD---------SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEH 58 (91)
T ss_dssp EEEEEEEECBTTBTSEEEECS---------SSCEEEEECTTSHHHHHT-CCTTCEEEEETTEECTT
T ss_pred ceEEEEEEeCCCCccEEEecC---------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCC
Confidence 678899999989999999763 458999999999999999 99999999999999985
No 86
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.29 E-value=4.4e-12 Score=89.84 Aligned_cols=65 Identities=26% Similarity=0.471 Sum_probs=56.6
Q ss_pred CceEEEEEEEcCC-CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeecc
Q psy12206 39 NMKILDIELVKGN-KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSE 105 (164)
Q Consensus 39 ~~~~~~v~L~k~~-~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~ 105 (164)
..++++|.|.|.+ .+|||++.++.+... ...+++|..|.+++||+++|+|++||+|++|||.++.
T Consensus 23 ~~~~~~v~l~k~~~~~lG~~i~g~~~~~~--~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~ 88 (128)
T 2db5_A 23 GRQIEYIDIERPSTGGLGFSVVALRSQNL--GKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLD 88 (128)
T ss_dssp TCEEEEEEEECCSSSCCCCEEEEEECSSS--SCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCS
T ss_pred cCceEEEEEEECCCCccCEEEecccCCCC--CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC
Confidence 3478889999987 689999998776432 3468999999999999999999999999999999997
No 87
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.28 E-value=1.3e-11 Score=87.99 Aligned_cols=66 Identities=26% Similarity=0.365 Sum_probs=53.9
Q ss_pred CceEEEEEEEcC----------CCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 39 NMKILDIELVKG----------NKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 39 ~~~~~~v~L~k~----------~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
+..+..+.|.|. ..+|||++.++.+.+. .+.++||..|.+++||+++|+|++||+|++|||.++.+
T Consensus 25 ~~~i~~v~l~~~~~~~~i~k~~~~~lG~~i~gg~~~~~--~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~ 100 (131)
T 1wfg_A 25 DRLIGRILLNKRLKDGSVPRDSGAMLGLKVVGGKMTES--GRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQG 100 (131)
T ss_dssp SEEEEEEEEECSCTTSCCCSCSCTTTTEEEEEEEECSS--SCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTT
T ss_pred CceeeEEEEeccceeEEEecCCCCCCCEEEecCccCCC--CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCC
Confidence 344556666655 3679999998775432 34689999999999999999999999999999999976
No 88
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=99.28 E-value=3.1e-11 Score=84.82 Aligned_cols=70 Identities=41% Similarity=0.565 Sum_probs=59.8
Q ss_pred CCCCCceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 35 TRQGNMKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 35 ~~~~~~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
....+++.+.+.|.+...+|||++.++..... ...+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 24 ~~~~~~~~~~v~l~~~~~~lG~~l~~~~~~~~--g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~ 93 (121)
T 2kom_A 24 NTKKIGKRLNIQLKKGTEGLGFSITSRDVTIG--GSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVG 93 (121)
T ss_dssp CCCCSCEEEEEEEECCTTCCCEEEECCCCSSS--SSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTT
T ss_pred cCccCCeEEEEEEEcCCCcEeEEEEeccCCcC--CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCC
Confidence 34466789999998888999999998764322 34689999999999999999999999999999999976
No 89
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=99.27 E-value=1.8e-11 Score=82.02 Aligned_cols=67 Identities=39% Similarity=0.677 Sum_probs=55.9
Q ss_pred CceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 39 NMKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 39 ~~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
+++..++.|.+...+|||++.+..+... ....+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 2 ~~~~~~v~l~~~~~~lG~~i~~~~~~~~-~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~ 68 (97)
T 2iwn_A 2 MSETFDVELTKNVQGLGITIAGYIGDKK-LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQG 68 (97)
T ss_dssp EEEEEEEEEECBTTBSCEEEECCCCC-----CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTT
T ss_pred CcEEEEEEEecCCCCCcEEEEccCCCCC-CCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCC
Confidence 4577888998888899999998754322 134689999999999999999999999999999999986
No 90
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.27 E-value=3.1e-12 Score=85.34 Aligned_cols=59 Identities=31% Similarity=0.483 Sum_probs=51.9
Q ss_pred eEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 41 KILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 41 ~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
++++|+|.|++.+|||++.+..+ ..+++|..|.++|||+++| |++||+|++|||.++.+
T Consensus 3 ~pr~v~l~k~~~~~G~~l~~~~~------~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~ 61 (91)
T 2vsp_A 3 KPKLCRLAKGENGYGFHLNAIRG------LPGSFIKEVQKGGPADLAG-LEDEDVIIEVNGVNVLD 61 (91)
T ss_dssp CEEEEEEECBTTBTSCCCBCCTT------CSCCBC-CCCTTSHHHHTT-CCTTCEEEEETTEECTT
T ss_pred CcEEEEEEeCCCcccEEEEeccC------CCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCC
Confidence 67889999998999999987643 3578999999999999999 99999999999999983
No 91
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=99.27 E-value=2e-11 Score=82.56 Aligned_cols=62 Identities=24% Similarity=0.480 Sum_probs=51.3
Q ss_pred ceEEEEEEEcCC---CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 40 MKILDIELVKGN---KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 40 ~~~~~v~L~k~~---~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
..++.|+|.|.+ .+|||++...... ...+++|..|.++|||+++| |++||+|++|||.++.+
T Consensus 5 ~~~~~v~i~k~~~~~~~~Gf~v~~~~~~----~~~g~~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~ 69 (94)
T 3kzd_A 5 KVTHSIHIEKSDTAADTYGFSLSSVEED----GIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADA 69 (94)
T ss_dssp CEEEEEEEEC------CCSEEEEEECSS----SSCEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGG
T ss_pred cceeEEEEEeCCCCcCCcCEEEEecCCC----CcCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCC
Confidence 467889999987 3799999874422 23689999999999999999 99999999999999986
No 92
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.27 E-value=2.3e-11 Score=81.44 Aligned_cols=58 Identities=26% Similarity=0.472 Sum_probs=52.2
Q ss_pred CceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 39 NMKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 39 ~~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
...+++|.|.|+..+|||.+.+. .+++|..|.+++||+++| |++||+|++|||.++.+
T Consensus 6 ~~~~r~v~l~~~~~~~G~~l~~~---------~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~ 63 (93)
T 2dls_A 6 SGVQRCVIIQKDQHGFGFTVSGD---------RIVLVQSVRPGGAAMKAG-VKEGDRIIKVNGTMVTN 63 (93)
T ss_dssp CCCEEEEEEECSSSSCCEEEECS---------SSCEEEEECSSSTTTTTT-CCSSCEEEEETTEECSS
T ss_pred CCCCEEEEEEeCCCceeEEEeCC---------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCC
Confidence 34678899999889999999763 478999999999999999 99999999999999987
No 93
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.26 E-value=7.3e-12 Score=84.04 Aligned_cols=61 Identities=21% Similarity=0.358 Sum_probs=52.6
Q ss_pred CceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 39 NMKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 39 ~~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
...+++|.| +.+.+|||++.++.+ ...+++|..|.+++||+++| |++||+|++|||.++.+
T Consensus 6 ~~~~~~v~l-~~~~~~G~~l~gg~~-----~~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~ 66 (94)
T 2eeg_A 6 SGMPHSVTL-RGPSPWGFRLVGGRD-----FSAPLTISRVHAGSKAALAA-LCPGDLIQAINGESTEL 66 (94)
T ss_dssp CCCCEEEEE-CCSSCCSCCEECCTT-----TTSCCEECCCCSSSHHHHTT-CCTTCEEEEETTEETTT
T ss_pred cCceEEEEE-eCCCccCEEEECccC-----CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCC
Confidence 345677888 566789999999875 24678999999999999999 99999999999999987
No 94
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.26 E-value=8.8e-12 Score=85.19 Aligned_cols=60 Identities=37% Similarity=0.572 Sum_probs=52.2
Q ss_pred eEEEEEEEcCC-CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhc-CCCCCCCEEEEECCeeccC
Q psy12206 41 KILDIELVKGN-KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVD-GRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 41 ~~~~v~L~k~~-~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~-G~L~~GD~Il~VNG~~v~~ 106 (164)
.++++.|.|.. .+|||++.++.+. ..+++|..|.++|||+++ | |++||+|++|||.++.+
T Consensus 9 ~~~~v~l~~~~~~~lG~~l~~g~~~-----~~~~~V~~V~~~s~A~~a~g-L~~GD~Il~Ing~~v~~ 70 (103)
T 2dc2_A 9 PIRKVLLLKEDHEGLGISITGGKEH-----GVPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRD 70 (103)
T ss_dssp CEEEEEEECCSSSCCCEEEEEEGGG-----TEEEEEEEECTTSHHHHHTC-CCSSEEEEEETTEESTT
T ss_pred CcEEEEEEeCCCCccCEEEEeccCC-----CCCEEEEEECCCCHHHHhCC-CCCCCEEEEECCEECCC
Confidence 56778888876 7899999987642 358999999999999996 7 99999999999999976
No 95
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.26 E-value=4.8e-12 Score=86.62 Aligned_cols=62 Identities=32% Similarity=0.421 Sum_probs=54.6
Q ss_pred CCceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 38 GNMKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 38 ~~~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
....+++|+|.|+..+|||++.+... ..+++|..|.++|||+++| |++||+|++|||.++.+
T Consensus 5 ~~~~~r~v~l~k~~~~~G~~l~~~~~------~~g~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~ 66 (106)
T 2eei_A 5 SSGQPRLCYLVKEGGSYGFSLKTVQG------KKGVYMTDITPQGVAMRAG-VLADDHLIEVNGENVED 66 (106)
T ss_dssp CCSSSEEEEEECCSSSCSCCEECCSS------CCSCEECCCCTTSHHHHHT-CCSSEEEEEETTEECTT
T ss_pred CCCCCEEEEEEECCCCCCEEEEeccC------CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCC
Confidence 34577889999988899999987642 3679999999999999999 99999999999999975
No 96
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.26 E-value=1.4e-11 Score=81.43 Aligned_cols=56 Identities=30% Similarity=0.541 Sum_probs=47.7
Q ss_pred EEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 44 DIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 44 ~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
++++ +.+.+|||++.++.+. ..+++|..|.++|||+++| |++||+|++|||.++.+
T Consensus 5 ~v~~-~~~~~lG~~l~~~~~~-----~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~ 60 (87)
T 2pa1_A 5 TVDV-AGPAPWGFRITGGRDF-----HTPIMVTKVAERGKAKDAD-LRPGDIIVAINGESAEG 60 (87)
T ss_dssp EEEE-CSSSCCSEEEEEEGGG-----TEEEEEEEECSSSHHHHTT-CCTTCEEEEETTEESTT
T ss_pred EEEE-CCCCccCEEEecccCC-----CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCC
Confidence 3444 4557899999987642 3689999999999999999 99999999999999977
No 97
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.26 E-value=2.3e-11 Score=83.89 Aligned_cols=59 Identities=37% Similarity=0.755 Sum_probs=53.6
Q ss_pred eEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 41 KILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 41 ~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
+++++.|.|...+|||++.++.+ .+++|..|.+++||+++|+|++||+|++|||.++.+
T Consensus 15 ~~~~v~l~~~~~~lG~~l~~~~~-------~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~ 73 (111)
T 2dlu_A 15 HVEEVELINDGSGLGFGIVGGKT-------SGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQG 73 (111)
T ss_dssp EEEEEEEECCSSCCCEEEECCSS-------SSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTT
T ss_pred ceEEEEEEeCCCccCEEEeccCC-------CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC
Confidence 57889999988999999997642 579999999999999999999999999999999985
No 98
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.25 E-value=6.2e-12 Score=87.60 Aligned_cols=64 Identities=34% Similarity=0.611 Sum_probs=55.6
Q ss_pred ceEEEEEEEcCC-CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeecc
Q psy12206 40 MKILDIELVKGN-KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSE 105 (164)
Q Consensus 40 ~~~~~v~L~k~~-~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~ 105 (164)
.++++|.|.|.+ .+|||++.++.+... ...+++|..|.++|||+++|+|++||+|++|||.++.
T Consensus 19 ~~~~~v~l~k~~~~~lG~~i~~~~~~~~--~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~ 83 (117)
T 2o2t_A 19 RHVEVFELLKPPSGGLGFSVVGLRSENR--GELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALD 83 (117)
T ss_dssp SCEEEEEEECCSSSCSSCCEEEEECCC----CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECC
T ss_pred CeEEEEEEEECCCCCCCEEEeecccCCC--CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECC
Confidence 478889999985 789999998765432 3478999999999999999999999999999999998
No 99
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.25 E-value=1.6e-11 Score=85.77 Aligned_cols=63 Identities=29% Similarity=0.484 Sum_probs=54.3
Q ss_pred ceEEEEEEEcCC-CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 40 MKILDIELVKGN-KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 40 ~~~~~v~L~k~~-~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
...+.+.|.|.+ .+|||++.++.+.. ..+++|..|.+++||+++|+|++||+|++|||.++.+
T Consensus 14 ~~~~~v~l~~~~~~~lG~~i~g~~~~~----~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~ 77 (119)
T 1x6d_A 14 DGIHVTILHKEEGAGLGFSLAGGADLE----NKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKG 77 (119)
T ss_dssp TTEEEEEEECCTTSCCSEEEECCSSSS----CSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSS
T ss_pred CCeEEEEEEeCCCCccCEEEeCCCCCC----CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCC
Confidence 357778888864 78999999887532 3689999999999999999999999999999999985
No 100
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.25 E-value=6.1e-11 Score=81.58 Aligned_cols=66 Identities=27% Similarity=0.396 Sum_probs=53.8
Q ss_pred ceEEEEEEEcCC-CCcCEEEecCCCCCC-------CCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 40 MKILDIELVKGN-KGLGFSIAGGIGNQH-------IPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 40 ~~~~~v~L~k~~-~glGf~i~gg~~~~~-------~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.+++++.|.|.. .+|||++.++.+... .....+++|..|.++|||+++| |++||+|++|||.++.+
T Consensus 6 ~~~~~v~l~~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~ 79 (109)
T 1q3o_A 6 IKEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVK 79 (109)
T ss_dssp EEEEEEEEECCTTSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTT
T ss_pred cCcEEEEEEECCCCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCC
Confidence 367788898654 789999998875321 0123479999999999999999 99999999999999987
No 101
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.24 E-value=3.7e-11 Score=83.39 Aligned_cols=69 Identities=23% Similarity=0.445 Sum_probs=56.2
Q ss_pred CCCceEEEEEEEcCC-CCcCEEEecCCCCCCC--CCCCcEEEEEeCCCChhhh-cCCCCCCCEEEEECCeeccC
Q psy12206 37 QGNMKILDIELVKGN-KGLGFSIAGGIGNQHI--PGDNGIYVTKIMDGGAAQV-DGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 37 ~~~~~~~~v~L~k~~-~glGf~i~gg~~~~~~--~~~~gv~V~~V~~gs~A~~-~G~L~~GD~Il~VNG~~v~~ 106 (164)
+..+++++|.|.|.. .+|||+|.++.+.+.. ....+++|..|.++|||++ +| |++||+|++|||.++.+
T Consensus 6 ~~~~~~~~v~l~~~~~~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~ag-L~~GD~I~~ing~~v~~ 78 (114)
T 1uew_A 6 SGSLQTSDVVIHRKENEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAK-LKVGDRILAVNGQSIIN 78 (114)
T ss_dssp SCCCCCEEEEEECCTTSCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSS-CCTTCBEEEETTBCTTT
T ss_pred CCcccceEEEEEECCCCCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCC-CCCCCEEEEECCEECCC
Confidence 355678889998865 7899999987654321 1123679999999999999 88 99999999999999977
No 102
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.24 E-value=1.3e-11 Score=84.58 Aligned_cols=62 Identities=19% Similarity=0.401 Sum_probs=54.2
Q ss_pred ceEEEEEEEcCC-CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcC-CCCCCCEEEEECCeeccC
Q psy12206 40 MKILDIELVKGN-KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDG-RLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 40 ~~~~~v~L~k~~-~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G-~L~~GD~Il~VNG~~v~~ 106 (164)
...+.+.|.|+. .+|||++.++.+ ...+++|..|.++|||+++| +|++||+|++|||.++.+
T Consensus 16 ~~~~~v~l~~~~~~~~G~~~~gg~~-----~~~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~ 79 (107)
T 3nfk_A 16 DNLVLIRMKPDENGRFGFNVKGGYD-----QKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAE 79 (107)
T ss_dssp CCCEEEEECCCTTSCCCEEEEEEGG-----GTEEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTT
T ss_pred CCEEEEEEEcCCCCCCCEEEEccCC-----CCCCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCC
Confidence 357889998887 789999998764 23579999999999999999 599999999999999986
No 103
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=99.24 E-value=1.8e-12 Score=109.75 Aligned_cols=92 Identities=21% Similarity=0.364 Sum_probs=36.3
Q ss_pred CcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC--------C--cCCCceeE----------eeecc----------
Q psy12206 71 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED--------K--RASPGIFL----------CNIAG---------- 120 (164)
Q Consensus 71 ~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~--------~--~a~~~v~l----------~~~~~---------- 120 (164)
.+++|..|.++|||+++| |++||+|++|||.++.+ . .....++| +.+..
T Consensus 286 ~G~~V~~V~~gspA~~AG-L~~GDvI~~inG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~~~~~~~ 364 (448)
T 1ky9_A 286 RGAFVSQVLPNSSAAKAG-IKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQVDS 364 (448)
T ss_dssp CSEECCCCTTCSSSTTTT-CCTTCEECBSSSSBCCSSHHHHHHTTSSBTTCCCEEEEESSSCEEECCCC-----------
T ss_pred CceEEEEeccCCHHHHcC-CCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEEecCCCccccc
Confidence 689999999999999999 99999999999999988 1 11222333 00000
Q ss_pred ------CCCCcc--cCCCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 121 ------GIGNQH--IPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 121 ------~~~~~~--~~~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
-.|..+ .....|++|..|.++|||+++| |++||+|++|||+++
T Consensus 365 ~~~~~~~~G~~l~~~~~~~gv~V~~V~~gspA~~aG-L~~GDiI~~vng~~v 415 (448)
T 1ky9_A 365 SSIFNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIG-LKKGDVIIGANQQAV 415 (448)
T ss_dssp ----------------------------------------------------
T ss_pred ccccccccceEeeccCCCCeEEEEEecCCCHHHHcC-CCCCCEEEEECCEEC
Confidence 001111 1123578999999999999999 999999999999864
No 104
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.24 E-value=3.2e-11 Score=81.74 Aligned_cols=63 Identities=38% Similarity=0.621 Sum_probs=54.3
Q ss_pred CCceEEEEEEEcCCCC-cCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 38 GNMKILDIELVKGNKG-LGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 38 ~~~~~~~v~L~k~~~g-lGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
....+++++|.|.+.+ |||++.+..+ ...+++|..|.++|||+++| |++||+|++|||.++.+
T Consensus 7 ~~~~~~~v~l~~~~~~~lG~~~~~~~~-----~~~gv~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~ 70 (100)
T 2eeh_A 7 GSDIIHSVRVEKSPAGRLGFSVRGGSE-----HGLGIFVSKVEEGSSAERAG-LCVGDKITEVNGLSLES 70 (100)
T ss_dssp CCCEECCEEECCCSSSSCSEEEECCTT-----TTCCEEEEEECTTSHHHHHT-CCSSCEEEEETTEECSS
T ss_pred CCCeEEEEEEEECCCCCccEEEEcccc-----CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCC
Confidence 3447888999888754 9999998653 23689999999999999999 99999999999999987
No 105
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.24 E-value=1.5e-11 Score=85.94 Aligned_cols=62 Identities=18% Similarity=0.404 Sum_probs=53.6
Q ss_pred CceEEEEEEEcCCC-CcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhc--CCCCCCCEEEEECCeeccC
Q psy12206 39 NMKILDIELVKGNK-GLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVD--GRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 39 ~~~~~~v~L~k~~~-glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~--G~L~~GD~Il~VNG~~v~~ 106 (164)
+.++++|+|.|+.. +|||++.++.+ ...+++|..|.++|||+++ | |++||+|++|||.++.+
T Consensus 13 ~~~~~~v~l~k~~~~~~G~~l~gg~~-----~~~~v~V~~V~~~spA~~a~gG-L~~GD~Il~ing~~v~~ 77 (119)
T 2cs5_A 13 HDNLVLIRMKPDENGRFGFNVKGGYD-----QKMPVIVSRVAPGTPADLCVPR-LNEGDQVVLINGRDIAE 77 (119)
T ss_dssp SSCCEEEEECCCSSSCCSEEEEEEGG-----GTEEEEEEEECSSSTTTSSSSC-CCTTCEEEEETTBCTTS
T ss_pred CCCeEEEEEEeCCCCCcCEEEecccC-----CCCCeEEEEECCCCHHHHhhcC-CCCCCEEEEECCEECCC
Confidence 34678899999774 59999998764 2357999999999999999 7 99999999999999976
No 106
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.24 E-value=1.6e-11 Score=84.55 Aligned_cols=59 Identities=24% Similarity=0.501 Sum_probs=51.7
Q ss_pred ceEEEEEEEcCC-CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 40 MKILDIELVKGN-KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 40 ~~~~~v~L~k~~-~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
+++++|+|.|.. .+|||++.+. ..+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 1 ~~~~~v~L~k~~~~glG~~i~~~--------~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~ 60 (106)
T 2la8_A 1 LEKFNVDLMKKAGKELGLSLSPN--------EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEG 60 (106)
T ss_dssp CEEEEEEECCBSSSTTCCEEEEC--------SSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSS
T ss_pred CeEEEEEEEeCCCCccCEEEEeC--------CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCC
Confidence 367889998554 7899999872 2689999999999999999999999999999999976
No 107
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.23 E-value=3.4e-11 Score=82.45 Aligned_cols=66 Identities=24% Similarity=0.390 Sum_probs=53.3
Q ss_pred ceEEEEEEEcCCCCcCEEEecCCCCCCC-------CCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 40 MKILDIELVKGNKGLGFSIAGGIGNQHI-------PGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 40 ~~~~~v~L~k~~~glGf~i~gg~~~~~~-------~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.+++.|.|.|.+.+|||++.++.+.... .....++|..|.++|||+++| |++||+|++|||.++.+
T Consensus 5 ~~~r~v~l~k~~~g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~ 77 (107)
T 3qe1_A 5 GSPRVVRIVKSESGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAG-VRKGDRILEVNGVNVEG 77 (107)
T ss_dssp -CCEEEEEECBTTBTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTT
T ss_pred CCcEEEEEEECCCCCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcC-CCCCCEEEEECCEECCC
Confidence 3577899999989999999987532210 012446799999999999999 99999999999999984
No 108
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=99.23 E-value=5.1e-12 Score=82.81 Aligned_cols=56 Identities=27% Similarity=0.604 Sum_probs=50.8
Q ss_pred eEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 41 KILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 41 ~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
++++|+|.|+..+|||++.+. .+++|..|.++|||+++| |++||+|++|||.++.+
T Consensus 2 ~~r~v~l~~~~~g~G~~~~~~---------~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~ 57 (83)
T 2kv8_A 2 RVRSVEVARGRAGYGFTLSGQ---------APCVLSCVMRGSPADFVG-LRAGDQILAVNEINVKK 57 (83)
T ss_dssp CEEEEEECCCSSCCSCBCCCS---------SSCBCCBCCTTSTTTTTT-CCTTCEEEEETTEECSS
T ss_pred CcEEEEEEeCCCcccEEEEcC---------CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCC
Confidence 578899999999999998763 368999999999999999 99999999999999987
No 109
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.23 E-value=5.3e-12 Score=85.84 Aligned_cols=64 Identities=33% Similarity=0.702 Sum_probs=56.2
Q ss_pred CCceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 38 GNMKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 38 ~~~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.+++.+++.|.+...+|||++.++.+ ...+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 8 ~~~~~~~v~l~~~~~g~G~~~~~~~~-----~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~ 71 (103)
T 1wfv_A 8 QDFDYFTVDMEKGAKGFGFSIRGGRE-----YKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRD 71 (103)
T ss_dssp CCSCCEECCEECCTTSSSBCCEEETT-----TTEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSS
T ss_pred cCceEEEEEEecCCCcCCEEEecccc-----CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCC
Confidence 45677888998888899999998754 23589999999999999999999999999999999987
No 110
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.22 E-value=2.3e-11 Score=80.95 Aligned_cols=59 Identities=22% Similarity=0.473 Sum_probs=50.2
Q ss_pred eEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 41 KILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 41 ~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.++.+.+. ++.+|||++.++.+. ..+++|..|.++|||+++| |++||+|++|||.++.+
T Consensus 3 ~~~~v~~~-~~~~~G~~l~~~~~~-----~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~ 61 (91)
T 2pkt_A 3 TTQQIDLQ-GPGPWGFRLVGGKDF-----EQPLAISRVTPGSKAALAN-LCIGDVITAIDGENTSN 61 (91)
T ss_dssp EEEEEEEE-SSSCCSEEEEEEGGG-----TEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTT
T ss_pred ccEEEEEC-CCCCCCEEEEccCCC-----CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCC
Confidence 35566774 457899999987642 3589999999999999999 99999999999999987
No 111
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.22 E-value=3.1e-11 Score=80.20 Aligned_cols=57 Identities=21% Similarity=0.338 Sum_probs=49.7
Q ss_pred EEEEEEEcCC-CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhh-cCCCCCCCEEEEECCeeccC
Q psy12206 42 ILDIELVKGN-KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQV-DGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 42 ~~~v~L~k~~-~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~-~G~L~~GD~Il~VNG~~v~~ 106 (164)
++.|+|.|.+ .+|||++.+.. ..+++|..|.++|||++ +| |++||+|++|||.++.+
T Consensus 2 ~r~V~l~K~~~~~lG~~i~~~~-------~~~~~I~~V~~gspA~~~ag-L~~GD~I~~Ing~~v~~ 60 (88)
T 1kwa_A 2 SRLVQFQKNTDEPMGITLKMNE-------LNHCIVARIMHGGMIHRQGT-LHVGDEIREINGISVAN 60 (88)
T ss_dssp CEEEEEEECSSSCCCEEEECSC-------GGGEEEEEECTTSHHHHHTC-CCTTCEEEEETTEEGGG
T ss_pred eEEEEEEeCCCCceeEEEEeCC-------CCCEEEEEECCCCHHHHcCC-CCCCCEEEEECCEECCC
Confidence 4678999986 78999998742 25799999999999999 66 99999999999999984
No 112
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.22 E-value=3.3e-11 Score=81.86 Aligned_cols=58 Identities=21% Similarity=0.422 Sum_probs=50.8
Q ss_pred EEEEEEEcCC-CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 42 ILDIELVKGN-KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 42 ~~~v~L~k~~-~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
++.+.|.|.+ .+|||++.... +.+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 13 ~~~v~l~K~~~~~lG~~l~~~~-------~~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~ 71 (97)
T 2ejy_A 13 VRLIQFEKVTEEPMGICLKLNE-------KQSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTN 71 (97)
T ss_dssp CEEEEEEECSSSCCSEEEEECT-------TCCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCS
T ss_pred cEEEEEEeCCCCCeeEEEEeCC-------CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCC
Confidence 4668898876 68999998643 2589999999999999999999999999999999985
No 113
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.22 E-value=9.7e-12 Score=84.79 Aligned_cols=60 Identities=22% Similarity=0.426 Sum_probs=52.2
Q ss_pred ceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 40 MKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 40 ~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.++.+|.|. ++.+|||++.++.+ ...+++|..|.++|||+++| |++||+|++|||.++.+
T Consensus 4 g~~~~v~l~-~~~~~G~~l~gg~~-----~~~~v~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~ 63 (103)
T 1wf7_A 4 GSSGSVSLV-GPAPWGFRLQGGKD-----FNMPLTISSLKDGGKASQAH-VRIGDVVLSIDGISAQG 63 (103)
T ss_dssp CCCEEEEEE-SSSCCSCCEEEETT-----TTEEEEECCCCTTCHHHHTT-CCTTCBEEEETTEECSS
T ss_pred CCEEEEEEe-CCCccCEEEecccc-----CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCC
Confidence 456778886 56889999998875 23578999999999999999 99999999999999987
No 114
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=99.22 E-value=4e-11 Score=79.32 Aligned_cols=57 Identities=30% Similarity=0.580 Sum_probs=48.5
Q ss_pred eEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 41 KILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 41 ~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
+.++|+|.|++.+|||++.+..+ ..+++|..+ ++|||+ +| |++||+|++|||.++.+
T Consensus 3 ~~~~v~l~k~~~g~G~~~~~~~~------~~~~~v~~v-~~spA~-aG-l~~GD~I~~vng~~v~~ 59 (88)
T 3bpu_A 3 ELITVHIVKGPMGFGFTIADSPG------GGGQRVKQI-VDSPRS-RG-LKEGDLIVEVNKKNVQA 59 (88)
T ss_dssp EEEEEEEECBTTBSSCEEEECTT------SSSEEEEEC-CC--CC-TT-CCTTCEEEEETTEECTT
T ss_pred cEEEEEEEcCCCceeEEEEecCC------CCcEEEEEe-cCChhH-hC-CCCCCEEEEECCEEcCC
Confidence 67889999999999999987542 357899887 999999 88 99999999999999976
No 115
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.21 E-value=6.6e-12 Score=89.07 Aligned_cols=65 Identities=42% Similarity=0.647 Sum_probs=52.5
Q ss_pred eEEEEEEE-cCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 41 KILDIELV-KGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 41 ~~~~v~L~-k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
..+++.|. +...+|||++.++.+... ..+.++||..|.++|||+++|+|++||+|++|||.++.+
T Consensus 25 ~~~~v~l~k~~~~glG~~i~~~~~~~~-~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~ 90 (127)
T 1wg6_A 25 LTLEIPLNDSGSAGLGVSLKGNKSRET-GTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLG 90 (127)
T ss_dssp EEEEEECSSSTTTCCCCEEEEEEETTT-TEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTT
T ss_pred eEEEEEEeeCCCCccCeEEecccCCCC-CCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCC
Confidence 35556665 445889999998764311 123589999999999999999999999999999999987
No 116
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.21 E-value=2.8e-11 Score=81.60 Aligned_cols=61 Identities=23% Similarity=0.496 Sum_probs=53.2
Q ss_pred CCceEEEEEEEcC-CCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 38 GNMKILDIELVKG-NKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 38 ~~~~~~~v~L~k~-~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.+++.+++.|.+. ..+|||++.+. ..+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 5 ~~~~~~~v~l~~~~~~glG~~~~~~--------~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~ 66 (96)
T 2qkv_A 5 NSLEKFNVDLMKKAGKELGLSLSPN--------EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEG 66 (96)
T ss_dssp CCCCCEEEEEECBTTBCCCEEEEEC--------SSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTT
T ss_pred HHCceEEEEEEeCCCCCccEEEEeC--------CCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCC
Confidence 4567888999774 47899999872 2579999999999999999999999999999999976
No 117
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=99.20 E-value=5.7e-11 Score=82.73 Aligned_cols=61 Identities=25% Similarity=0.448 Sum_probs=52.3
Q ss_pred eEEEEEEEcCCCC-cCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 41 KILDIELVKGNKG-LGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 41 ~~~~v~L~k~~~g-lGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.+++|.|.|.+.+ |||++.++.+ ...+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 24 ~~~~V~l~~~~~~~lG~~l~~~~~-----~~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~ 85 (114)
T 2gzv_A 24 VPGKVTLQKDAQNLIGISIGGGAQ-----YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKG 85 (114)
T ss_dssp CCEEEEEECCTTSCCSEEEEECCC-------CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTT
T ss_pred CCEEEEEEECCCCcEeEEEEeCCC-----CCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCC
Confidence 5677999998854 9999998754 23579999999999999999999999999999999943
No 118
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.20 E-value=1.6e-11 Score=84.81 Aligned_cols=65 Identities=35% Similarity=0.647 Sum_probs=57.4
Q ss_pred CCCCceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 36 RQGNMKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 36 ~~~~~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.+...+++.|+|.|...+|||++.++.+ ..+++|..|.+++||+++|+|++||+|++|||.++.+
T Consensus 10 ~~~~~~~~~v~l~k~~~glG~~l~~~~~------~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~ 74 (113)
T 1um7_A 10 GGDAREPRKIILHKGSTGLGFNIVGGED------GEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRN 74 (113)
T ss_dssp CCCCCSEEEEEEECCSSCSSBCCBCCST------TCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTT
T ss_pred CcCCCceEEEEEEECCCcccEEEEeccC------CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC
Confidence 3455689999999988999999988753 3678999999999999999999999999999999977
No 119
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.19 E-value=1.5e-11 Score=85.46 Aligned_cols=62 Identities=37% Similarity=0.630 Sum_probs=54.7
Q ss_pred eEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 41 KILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 41 ~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
+.+.+.|.+...+|||++.++.+.+. .+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 17 ~~~~v~l~~~~~glG~~l~~~~~~~~----~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~ 78 (116)
T 2dm8_A 17 QEMIIEISKGRSGLGLSIVGGKDTPL----NAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRN 78 (116)
T ss_dssp SCEEEEEECCSSCCCCCCBCCTTSSC----SSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSS
T ss_pred CEEEEEEEECCCcccEEEeCCCCCCc----CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCC
Confidence 45778898988999999998765331 589999999999999999999999999999999977
No 120
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.19 E-value=9.7e-11 Score=82.30 Aligned_cols=68 Identities=21% Similarity=0.350 Sum_probs=56.6
Q ss_pred CCceEEEEEEEcCC-CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 38 GNMKILDIELVKGN-KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 38 ~~~~~~~v~L~k~~-~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
...++++|.|.|+. .+|||++.++...+. ....+++|..|.+++||+++|+|++||+|++|||+++.+
T Consensus 12 ~~~~~~~v~l~k~~~~glG~~l~~~~~~~~-~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~ 80 (122)
T 1v5q_A 12 VHTETTEVVLTADPVTGFGIQLQGSVFATE-TLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTED 80 (122)
T ss_dssp CCEEEEEEEECCCSSSSSCEEEECCSCCSS-SCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSS
T ss_pred ccceeEEEEEEeCCCCccCEEEecccccCC-cCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCC
Confidence 45688899999886 889999998743221 023678999999999999999999999999999999976
No 121
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.18 E-value=4.3e-11 Score=81.21 Aligned_cols=61 Identities=34% Similarity=0.620 Sum_probs=52.4
Q ss_pred ceEEEEEEEcC--CCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 40 MKILDIELVKG--NKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 40 ~~~~~v~L~k~--~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.+++++.|.+. ..+|||++.++.+ ...+++|..|.+++||+++| |++||+|++|||.++.+
T Consensus 7 ~~~~~v~l~~~~~~~~lG~~~~~~~~-----~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~ 69 (101)
T 1uez_A 7 GEVRLVSLRRAKAHEGLGFSIRGGSE-----HGVGIYVSLVEPGSLAEKEG-LRVGDQILRVNDKSLAR 69 (101)
T ss_dssp CCCEEECCCCCCTTTCSSEEEEECTT-----TTCCEEEEEECTTSHHHHHT-CCSSCCEEEETTEECSS
T ss_pred CccEEEEEEECCCCCcccEEEeCCCC-----CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCC
Confidence 36677778774 3689999998764 23689999999999999999 99999999999999987
No 122
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.18 E-value=4.5e-11 Score=83.47 Aligned_cols=63 Identities=22% Similarity=0.349 Sum_probs=54.3
Q ss_pred ceEEEEEEEcCC-CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 40 MKILDIELVKGN-KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 40 ~~~~~v~L~k~~-~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
..++.|.|.|.. .+|||++.++.+.. ..+++|..|.+++||+++|+|++||+|++|||.++.+
T Consensus 14 ~~~~~v~l~k~~~~~lG~~i~~~~~~~----~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~ 77 (117)
T 1v62_A 14 SGPLMVEIVKTPGSALGISLTTTSLRN----KSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEH 77 (117)
T ss_dssp SSSEEEEEECCTTCCCCCEEEEECCSS----SCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTS
T ss_pred CCcEEEEEEcCCCCcccEEEEccCCCC----CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC
Confidence 367889999987 78999999875421 2459999999999999999999999999999999955
No 123
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=99.17 E-value=9.6e-11 Score=82.65 Aligned_cols=61 Identities=20% Similarity=0.395 Sum_probs=54.5
Q ss_pred CceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 39 NMKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 39 ~~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
+..++.++|.+...+|||++.+..+ ..+++|..|.++|||+++| |++||+|++|||.++.+
T Consensus 7 ~~~~r~v~l~~~~~g~G~~l~~~~~------~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~ 67 (128)
T 2kjd_A 7 MLRPRLCTMKKGPSGYGFNLHSDKS------KPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEG 67 (128)
T ss_dssp TCCCEEEEEECCSSSCCEEEEECSS------SCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTT
T ss_pred CCCcEEEEEecCCCcccEEEEecCC------CCCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCC
Confidence 4567889999999999999998653 3589999999999999999 99999999999999977
No 124
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=99.16 E-value=1.4e-10 Score=80.22 Aligned_cols=62 Identities=24% Similarity=0.429 Sum_probs=51.8
Q ss_pred CceEEEEEEEcC-CCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 39 NMKILDIELVKG-NKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 39 ~~~~~~v~L~k~-~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
+.+++++.+.+. ..+|||++.++.+ ...+++|..|.+++||+++| |++||+|++|||.++.+
T Consensus 13 ~~~~~~v~~~~~~~~~lG~~l~~~~~-----~~~gv~V~~V~~~s~A~~aG-L~~GD~Il~vng~~v~~ 75 (114)
T 1x5n_A 13 ENKEKKVFISLVGSRGLGCSISSGPI-----QKPGIFISHVKPGSLSAEVG-LEIGDQIVEVNGVDFSN 75 (114)
T ss_dssp CCSSEEEEECCCSSCCCCEEEEECCS-----SSCSEEEEEECTTSTTTTTT-CCTTCEEEEETTEETTS
T ss_pred CCCcEEEEEEEcCCCceeEEEeecCC-----CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCC
Confidence 334566777554 4789999998754 24689999999999999999 99999999999999987
No 125
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=99.16 E-value=5e-11 Score=82.62 Aligned_cols=56 Identities=20% Similarity=0.268 Sum_probs=50.0
Q ss_pred eEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 41 KILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 41 ~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.+++|.|.|++.+|||.+.+. .+++|..|.++|||+++| |++||+|++|||.++.+
T Consensus 23 ~~r~v~l~k~~~~~G~~l~~~---------~~v~V~~V~~gspA~~AG-L~~GD~Il~VnG~~v~~ 78 (109)
T 2vsv_A 23 MPRSIRFTAEEGDLGFTLRGN---------APVQVHFLDPYCSASVAG-AREGDYIVSIQLVDCKW 78 (109)
T ss_dssp SCEEEEECCGGGCCCEEEESS---------SSCEEEEECTTSHHHHTT-CCTTCEEEEETTEECTT
T ss_pred CCEEEEEEeCCCceeEEEeCC---------CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCC
Confidence 567899999889999999653 468999999999999999 99999999999999984
No 126
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.15 E-value=7.6e-11 Score=80.58 Aligned_cols=58 Identities=21% Similarity=0.345 Sum_probs=51.2
Q ss_pred EEEEEEEcCC-CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 42 ILDIELVKGN-KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 42 ~~~v~L~k~~-~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
++.++|.|.+ .+|||.+....+ ..+++|..|.++|||+++| |++||+|++|||.++.+
T Consensus 2 ~r~v~l~~~~~~~~G~~l~~~~~------~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~ 60 (106)
T 3ngh_A 2 PRESKLSKQEGQNYGFFLRIEKD------TDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDK 60 (106)
T ss_dssp CEEEEEECCTTCCCCCEEECCTT------CCSCEEECCCTTSHHHHTT-CCTTCEEEEETTEECTT
T ss_pred CEEEEEEeCCCCeeCEEEEEEeC------CCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCC
Confidence 4678898887 679999987653 3578999999999999999 99999999999999987
No 127
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.15 E-value=1.1e-10 Score=81.25 Aligned_cols=58 Identities=33% Similarity=0.564 Sum_probs=52.8
Q ss_pred eEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 41 KILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 41 ~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
+++.|.|.+...+|||++.++. +.+++|..|.+++||+++| |++||+|++|||.++.+
T Consensus 19 ~~~~v~l~~~~~~lG~~~~~~~-------~~gv~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~ 76 (117)
T 1uit_A 19 EPRHVKVQKGSEPLGISIVSGE-------KGGIYVSKVTVGSIAHQAG-LEYGDQLLEFNGINLRS 76 (117)
T ss_dssp CCEEEEEECSSCCCCEEEEECT-------TSCEEEEEECTTSHHHHHT-CCTTCEECEETTEETTT
T ss_pred CCEEEEEEeCCCCccEEEEccC-------CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCC
Confidence 6778999998889999998864 2589999999999999999 99999999999999987
No 128
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.15 E-value=1.2e-10 Score=80.72 Aligned_cols=58 Identities=21% Similarity=0.438 Sum_probs=52.0
Q ss_pred ceEEEEEEEcCCC-CcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCC-CCCCEEEEECCeeccC
Q psy12206 40 MKILDIELVKGNK-GLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRL-QVGDKLIAVRNSTSED 106 (164)
Q Consensus 40 ~~~~~v~L~k~~~-glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L-~~GD~Il~VNG~~v~~ 106 (164)
..+++|+|.|... +|||++.+. ..+++|..|.+++||+++| | ++||+|++|||.++.+
T Consensus 24 ~~~~~v~l~k~~~~~lG~~i~~~--------~~gv~V~~V~~~spA~~aG-ll~~GD~I~~vng~~v~~ 83 (113)
T 1va8_A 24 ETVKIVRIEKARDIPLGATVRNE--------MDSVIISRIVKGGAAEKSG-LLHEGDEVLEINGIEIRG 83 (113)
T ss_dssp EECEEEEEEECTTCCCCEEEEEC--------SSSEEEEEECTTSHHHHHT-CCCTTCEEEEETTEECTT
T ss_pred CceEEEEEEeCCCCceeEEEEeC--------CCCEEEEEeCCCCHHHHcC-CCCCCCEEEEECCEECCC
Confidence 4678899999886 999999875 2689999999999999999 6 9999999999999985
No 129
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.15 E-value=3.1e-11 Score=81.95 Aligned_cols=63 Identities=27% Similarity=0.571 Sum_probs=50.7
Q ss_pred CCCceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhc-CCCCCCCEEEEECCeeccC
Q psy12206 37 QGNMKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVD-GRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 37 ~~~~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~-G~L~~GD~Il~VNG~~v~~ 106 (164)
+.+++..++.+. .+.+|||++.++.+. ..+++|..|.++|||+++ | |++||+|++|||.++.+
T Consensus 7 ~~~~~~~~v~~~-~~~~~G~~~~gg~~~-----~~~v~V~~V~~~spA~~agG-L~~GD~I~~ing~~v~~ 70 (100)
T 2edp_A 7 GGSFQYVPVQLQ-GGAPWGFTLKGGLEH-----CEPLTVSKIEDGGKAALSQK-MRTGDELVNINGTPLYG 70 (100)
T ss_dssp CCCCEEEEEECC-SCSCCCCCEEEEGGG-----TEEEEECCCCTTSHHHHHTS-CCTTCEEEEETTEECCS
T ss_pred CCCcEEEEEEEC-CCCCcCEEEeccCCC-----CCCeEEEEECCCCHHHHcCC-CCCCCEEEEECCEEccc
Confidence 344555555553 346899999987642 357899999999999999 7 99999999999999977
No 130
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=99.14 E-value=4.9e-11 Score=94.59 Aligned_cols=63 Identities=32% Similarity=0.461 Sum_probs=55.4
Q ss_pred CCceEEEEEEEcCC-CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhh-cCCCCCCCEEEEECCeeccC
Q psy12206 38 GNMKILDIELVKGN-KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQV-DGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 38 ~~~~~~~v~L~k~~-~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~-~G~L~~GD~Il~VNG~~v~~ 106 (164)
...++++|+|.|.+ .+|||+|.++.+. ..+++|..|.++|||++ +| |++||+|++|||+++.+
T Consensus 74 ~~~~~r~V~L~k~~~~glGf~I~gg~d~-----~~gi~V~~V~~gspA~~~aG-L~~GD~Il~VNG~~v~~ 138 (263)
T 1z87_A 74 LLLQRRRVTVRKADAGGLGISIKGGREN-----KMPILISKIFKGLAADQTEA-LFVGDAILSVNGEDLSS 138 (263)
T ss_dssp TSCSSEEECCCTTTTCCCCCEEEEETTT-----TEEEEEEECCTTSHHHHCTT-CCSSCEEEEESSCBCTT
T ss_pred CCCccEEEEEEeCCCCCEeEEEeeccCC-----CCCEEEEEECCCCHHHHhCC-CCCCCEEEEECCEECCC
Confidence 34468999999975 8899999998752 46899999999999999 57 99999999999999988
No 131
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.13 E-value=1.5e-10 Score=81.02 Aligned_cols=61 Identities=23% Similarity=0.489 Sum_probs=50.5
Q ss_pred eEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 41 KILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 41 ~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
..+.+.+.+. .+|||+|.++.+.+. .+++|..|.++|||+++|.|++||+|++|||.++.+
T Consensus 18 ~~~~~~~~~~-~glG~~i~gg~~~~~----~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~ 78 (118)
T 1v6b_A 18 DVRLLRIKKE-GSLDLALEGGVDSPV----GKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTD 78 (118)
T ss_dssp CEEEEEEESC-SCCCCEEEEBTTSSS----CSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTT
T ss_pred eEEEEEECCC-CccCEEEEcccCCCC----CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC
Confidence 4556667665 489999999876442 459999999999999994499999999999999987
No 132
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.13 E-value=3.7e-11 Score=85.40 Aligned_cols=58 Identities=33% Similarity=0.523 Sum_probs=52.4
Q ss_pred ceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeecc
Q psy12206 40 MKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSE 105 (164)
Q Consensus 40 ~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~ 105 (164)
.+.+++.|.++..+|||++.+. ..+++|..|.++|||+++|+|++||+|++|||.++.
T Consensus 26 ~~~~~~~l~k~~~glG~~i~~~--------~~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~ 83 (126)
T 1wif_A 26 NKVIQTKLTVGNLGLGLVVIQN--------GPYLQISHLINKGAAASDGILQPGDVLISVGHANVL 83 (126)
T ss_dssp CCEEEEEEECCTTCCCCCEEEE--------TTEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCT
T ss_pred CceEEEEEecCCceEeEEEEcC--------CCcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcC
Confidence 3678899999999999999873 357899999999999999999999999999999996
No 133
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=99.12 E-value=3.9e-11 Score=85.08 Aligned_cols=69 Identities=28% Similarity=0.384 Sum_probs=55.5
Q ss_pred CCceEEEEEEEcCC--CCcCEEEecCCCCCCC----CCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 38 GNMKILDIELVKGN--KGLGFSIAGGIGNQHI----PGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 38 ~~~~~~~v~L~k~~--~glGf~i~gg~~~~~~----~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.+..++.|+|.|.+ .+|||++.++.+.... ....+++|..|.++|||+++|.|++||+|++|||.++.+
T Consensus 26 ~~~~~r~v~l~k~~~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~ 100 (128)
T 1nf3_C 26 LPETHRRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSG 100 (128)
T ss_dssp SCTTCEEEEECCSSTTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTT
T ss_pred CCCccEEEEEEECCCCCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCC
Confidence 45578889999984 6899999987532100 012479999999999999999889999999999999965
No 134
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.12 E-value=2e-10 Score=80.99 Aligned_cols=66 Identities=29% Similarity=0.485 Sum_probs=52.7
Q ss_pred eEEEEEEEcCC-CCcCEEEecCCCCCC----CCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 41 KILDIELVKGN-KGLGFSIAGGIGNQH----IPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 41 ~~~~v~L~k~~-~glGf~i~gg~~~~~----~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.++++++.|.. .+|||++.++.+... .....+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 24 ~p~~v~l~k~~~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~ 94 (123)
T 2iwq_A 24 QPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRD 94 (123)
T ss_dssp CCEEEEECCCTTSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTT
T ss_pred CCEEEEEEecCCCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCC
Confidence 45778888876 679999988654321 1124689999999999999999999999999999999976
No 135
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.12 E-value=2.1e-10 Score=86.75 Aligned_cols=79 Identities=20% Similarity=0.349 Sum_probs=64.4
Q ss_pred hhhccCce-eeEEEeecccCCCCCceEEEEEEEcCC-CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCC
Q psy12206 17 IALNVGIS-KFMYVRRKKVTRQGNMKILDIELVKGN-KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGD 94 (164)
Q Consensus 17 ~~~~~~~~-~~~~v~~~~~~~~~~~~~~~v~L~k~~-~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD 94 (164)
..+..+.. +.|.+.|.... .....++.+.+.. .+|||++... ..+++|..|.++|+|+++|+|++||
T Consensus 91 ~~~~~~~~~v~l~v~R~~~~---~~~~~~v~l~~~~~~~lG~~~~~~--------~~gv~V~~V~~gs~A~~aG~L~~GD 159 (206)
T 3r0h_A 91 LFHTTYEKAVTLTVFRADPP---ELEKFNVDLMKKAGKELGLSLSPN--------EIGCTIADLIQGQYPEIDSKLQRGD 159 (206)
T ss_dssp HHHSCCSSEEEEEEECCSSC---CEEEEEEEEECCTTCCCCEEEEEC--------SSCEEEEEECTTSCHHHHHHCCTTC
T ss_pred HHHhcCCCceEEEEEecccC---CCcEEEEEEecCCCCccCeEEEcC--------CceEEEEEECCCChHHHcCCCCCCC
Confidence 34455566 99999886543 3467778887765 6899999853 3679999999999999999999999
Q ss_pred EEEEECCeeccC
Q psy12206 95 KLIAVRNSTSED 106 (164)
Q Consensus 95 ~Il~VNG~~v~~ 106 (164)
+|++|||+++.+
T Consensus 160 ~Il~VNg~~v~~ 171 (206)
T 3r0h_A 160 IITKFNGDALEG 171 (206)
T ss_dssp EEEEETTEECTT
T ss_pred EEEEECCEECCC
Confidence 999999999986
No 136
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.12 E-value=2e-10 Score=77.99 Aligned_cols=66 Identities=29% Similarity=0.496 Sum_probs=51.1
Q ss_pred eEEEEEEEcCC-CCcCEEEecCCCCCCC----CCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 41 KILDIELVKGN-KGLGFSIAGGIGNQHI----PGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 41 ~~~~v~L~k~~-~glGf~i~gg~~~~~~----~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.++++.|.|.. ..|||++.+..+.... +...+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 4 dp~~v~l~~~~~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~ 74 (103)
T 2fcf_A 4 QPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRD 74 (103)
T ss_dssp SCEEEEECCCC-CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTT
T ss_pred CCEEEEEEeCCCCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCC
Confidence 46778898876 6799999986543210 123589999999999999999999999999999999976
No 137
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=99.12 E-value=1.9e-10 Score=78.24 Aligned_cols=62 Identities=42% Similarity=0.693 Sum_probs=49.3
Q ss_pred EEEEEcCC----CCcCEEEecCCCCC-----CC--CCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 44 DIELVKGN----KGLGFSIAGGIGNQ-----HI--PGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 44 ~v~L~k~~----~glGf~i~gg~~~~-----~~--~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.+++.+.. .+|||++.++.+.. +. ....+++|..|.++|||+++| |++||+|++|||.++.+
T Consensus 7 ~i~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~ 79 (104)
T 3sfj_A 7 RVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTM 79 (104)
T ss_dssp EEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTT
T ss_pred EEEEEEccCCCCCcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCC
Confidence 35555533 25999999877642 11 245789999999999999999 99999999999999976
No 138
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.11 E-value=4.3e-10 Score=76.35 Aligned_cols=64 Identities=22% Similarity=0.365 Sum_probs=50.9
Q ss_pred ceEEEEEEEcCC-CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 40 MKILDIELVKGN-KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 40 ~~~~~v~L~k~~-~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.+.++++|.|.. .+|||++....... ...+++|..|.+++||++++.|++||+|++|||.++.+
T Consensus 8 ~~~~~v~l~k~~g~~lG~~i~~~~~~~---~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~ 72 (101)
T 2yt7_A 8 DNCREVHLEKRRGEGLGVALVESGWGS---LLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVG 72 (101)
T ss_dssp CCCEEEEEECCTTCCCCEEEEECCCSS---SSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTT
T ss_pred CceEEEEEEeCCCCccCEEEEeCCCCC---CccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC
Confidence 366778888766 68999998532211 23479999999999999965599999999999999944
No 139
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=99.10 E-value=1.2e-10 Score=78.63 Aligned_cols=61 Identities=23% Similarity=0.191 Sum_probs=48.4
Q ss_pred EEEEcCCCCcCEEEecCCCCCCC--CCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 45 IELVKGNKGLGFSIAGGIGNQHI--PGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 45 v~L~k~~~glGf~i~gg~~~~~~--~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
+.|.|...+|||++.+....+.. ....+++|..|.++|||+++| |++||+|++|||.++.+
T Consensus 6 v~l~~~~~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~ 68 (99)
T 3khf_A 6 IVIHSSGKKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAG-LRAGDLITHINGESVLG 68 (99)
T ss_dssp EEEEC-CCCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTT
T ss_pred EEEEeCCCCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCC
Confidence 67878889999999875432110 012367999999999999999 99999999999999984
No 140
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=99.10 E-value=1.3e-10 Score=87.65 Aligned_cols=62 Identities=29% Similarity=0.635 Sum_probs=54.4
Q ss_pred CceEEEEEEEcCC-CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 39 NMKILDIELVKGN-KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 39 ~~~~~~v~L~k~~-~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
..+++.|.|.|.+ .+|||++.++.+ ...+++|..|.++|||+++| |++||+|++|||.++.+
T Consensus 82 ~~~~~~v~l~k~~~~~lG~~i~~~~~-----~~~~~~V~~V~~gspA~~aG-L~~GD~Il~vng~~v~~ 144 (192)
T 3k1r_A 82 SRKLKEVRLDRLHPEGLGLSVRGGLE-----FGCGLFISHLIKGGQADSVG-LQVGDEIVRINGYSISS 144 (192)
T ss_dssp CSSCEEEEEETTSTTCCCEEEEEEGG-----GTEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTT
T ss_pred CCceEEEEEEeCCCCceeEEEEcccc-----cCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCC
Confidence 3467889999984 789999998754 23689999999999999999 99999999999999987
No 141
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.10 E-value=6e-10 Score=84.12 Aligned_cols=88 Identities=23% Similarity=0.381 Sum_probs=68.7
Q ss_pred hhhccCceeeEEEeecccCCC---CC--ceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCC
Q psy12206 17 IALNVGISKFMYVRRKKVTRQ---GN--MKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQ 91 (164)
Q Consensus 17 ~~~~~~~~~~~~v~~~~~~~~---~~--~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~ 91 (164)
...+.+..+.|.+.|..++.. .. +.+..+.+.+...+|||.+.++... ..+...+++|..|.++|||+++|+|+
T Consensus 77 ~~~~~g~~v~l~v~R~~~~~~~~g~~~~~~~~~v~l~~~~~~lG~~l~~g~~~-~~~~~~g~~V~~v~~~s~A~~aG~l~ 155 (200)
T 2qt5_A 77 LLKNVGERVVLEVEYELPPVSIQGSSVMFRTVEVTLHKEGNTFGFVIRGGAHD-DRNKSRPVVITCVRPGGPADREGTIK 155 (200)
T ss_dssp HHHTCCSEEEEEEEEECCCCCCCCSSEEEEEEEEEEECBTTBCSEEEEEECCS-STTTCEEEEEEEECTTSHHHHHCCCC
T ss_pred HHHhCCCeEEEEEeccCCCcccCCCccceeEEEEEEecCCCCeEEEEECCCCC-CccCCCCEEEEEECCCChHHHcCCCC
Confidence 345668899999988765421 11 2667778877778899999976532 11224689999999999999999999
Q ss_pred CCCEEEEECCeecc
Q psy12206 92 VGDKLIAVRNSTSE 105 (164)
Q Consensus 92 ~GD~Il~VNG~~v~ 105 (164)
+||+|++|||.++.
T Consensus 156 ~GD~I~~ing~~v~ 169 (200)
T 2qt5_A 156 PGDRLLSVDGIRLL 169 (200)
T ss_dssp TTCEEEEETTEECT
T ss_pred CCCEEEEECCEECC
Confidence 99999999999998
No 142
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.08 E-value=1.1e-10 Score=77.97 Aligned_cols=56 Identities=21% Similarity=0.339 Sum_probs=48.3
Q ss_pred eEEEEEEEcCC-CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeec
Q psy12206 41 KILDIELVKGN-KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTS 104 (164)
Q Consensus 41 ~~~~v~L~k~~-~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v 104 (164)
.++.|+|.|.+ .+|||++.+. ..+++|..|.++|||+++|.|++||+|++|||.++
T Consensus 6 ~~r~v~l~k~~~~~lG~~i~~~--------~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v 62 (91)
T 2e7k_A 6 SGRMVGIRKTAGEHLGVTFRVE--------GGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV 62 (91)
T ss_dssp CSCBCCBCCCTTCCCCEEEEES--------SSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC
T ss_pred CcEEEEEEECCCCcEeEEEEec--------CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC
Confidence 45667787654 6799999883 26899999999999999877999999999999999
No 143
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.07 E-value=1.2e-10 Score=81.32 Aligned_cols=62 Identities=24% Similarity=0.479 Sum_probs=52.6
Q ss_pred ceEEEEEEEcCCC---CcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 40 MKILDIELVKGNK---GLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 40 ~~~~~v~L~k~~~---glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
..++.++|.|.+. +|||++.+.... ...+++|..|.++|||+++| |++||+|++|||.++.+
T Consensus 14 ~~~~~v~l~k~~~~~~~~G~~v~~~~~~----~~~gv~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~ 78 (114)
T 2d8i_A 14 KVTQSIHIEKSDTAADTYGFSLSSVEED----GIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADA 78 (114)
T ss_dssp CEEEEEEEECSCTTTCCCCCEEEEEEET----TEEEEEEEECCTTSSHHHHT-CCTTCCEEEESSCBGGG
T ss_pred CceEEEEEEeCCCCccccCEEEEecCcC----CcCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCC
Confidence 4688899998774 799999874321 12579999999999999999 99999999999999977
No 144
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=99.07 E-value=8.8e-10 Score=91.85 Aligned_cols=112 Identities=19% Similarity=0.319 Sum_probs=79.4
Q ss_pred eEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC----------C--c
Q psy12206 41 KILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED----------K--R 108 (164)
Q Consensus 41 ~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~----------~--~ 108 (164)
+.+.+.+.++ .+|||++.++. +.+++|..|.+||||+++| |++||+|++|||.++.+ . .
T Consensus 9 ~~~~v~~~k~-~~lG~~i~gg~-------~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~ 79 (391)
T 3tsz_A 9 SMKLVKFRKG-DSVGLRLAGGN-------DVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLP 79 (391)
T ss_dssp CEEEEEEECC-SSCCEEEEEET-------TTEEEEEEECTTCHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSC
T ss_pred CcEEEEeecC-CceeEEEEecC-------CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhhc
Confidence 4666778675 47999999874 3789999999999999999 99999999999999976 1 2
Q ss_pred CCCceeEeeeccCCC---CcccCCCCCeEEEEECCCChhhhcC-CCCCCCEEEEECC
Q psy12206 109 ASPGIFLCNIAGGIG---NQHIPGDNGIYVTKIMDGGAAQVDG-RLQVGDKLIAVRN 161 (164)
Q Consensus 109 a~~~v~l~~~~~~~~---~~~~~~~~gv~I~~v~~gs~A~~~G-~L~~GD~Il~VNg 161 (164)
....++|.-...+.. .........+||.......+.+..+ .++.||++.-+|-
T Consensus 80 ~g~~v~l~v~r~~~~~~~~~~~~~~~~~~vral~dy~~~~~~~Lsf~~Gdil~V~~~ 136 (391)
T 3tsz_A 80 KGEEVTILAQKKKDVYRRIVESDVGDSFYIRTHFEYEKESPYGLSFNKGEVFRVVDT 136 (391)
T ss_dssp TTSEEEEEEEECHHHHGGGTSSCCSCCEEEEECSCBCCSSTTBCCBCTTCEEEEEES
T ss_pred CCCeEEEEEeeCCcccccccccccccccccccccccCCCCCCcceEccCCEEEEEec
Confidence 233455521111110 0011234588999888877765544 2589999988764
No 145
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.06 E-value=3.3e-11 Score=85.17 Aligned_cols=66 Identities=24% Similarity=0.421 Sum_probs=52.4
Q ss_pred ceEEEEEEEcCCCCcCEEEecCC-----------------------CCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEE
Q psy12206 40 MKILDIELVKGNKGLGFSIAGGI-----------------------GNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKL 96 (164)
Q Consensus 40 ~~~~~v~L~k~~~glGf~i~gg~-----------------------~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~I 96 (164)
..+++|+|.|...||||++.+.. .....+.+.+++|..|.+++||+++| |++||+|
T Consensus 7 ~~~r~v~l~r~~~g~Gf~l~~~t~y~~~~~~~~~~~~~~~G~~~G~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I 85 (126)
T 2yuy_A 7 GGPKTVTLKRTSQGFGFTLRHFIVYPPESAIQFSYKDEENGNRGGKQRNRLEPMDTIFVKQVKEGGPAFEAG-LCTGDRI 85 (126)
T ss_dssp SSCCCEEEECCSSSCSCCBCCCCCCCCSSCCCSCSSSCCCCSCCCTTSCCCCCCCCCCBCCCCSSSHHHHHT-CCSSCCC
T ss_pred CCCEEEEEEECCCCcceeecCccccCCHHHHHHHHHhhcCcceeceeeecccCCCCEEEEEECCCChHHHcC-CCCCCEE
Confidence 35667999999999999997521 00001123679999999999999999 9999999
Q ss_pred EEECCeeccC
Q psy12206 97 IAVRNSTSED 106 (164)
Q Consensus 97 l~VNG~~v~~ 106 (164)
++|||.++.+
T Consensus 86 ~~ing~~v~~ 95 (126)
T 2yuy_A 86 IKVNGESVIG 95 (126)
T ss_dssp CEETTEECSS
T ss_pred EEECCEECCC
Confidence 9999999974
No 146
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.06 E-value=3.5e-10 Score=81.41 Aligned_cols=67 Identities=39% Similarity=0.639 Sum_probs=53.5
Q ss_pred CceEEEEEEEcCC----CCcCEEEecCCCCC-----CC--CCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 39 NMKILDIELVKGN----KGLGFSIAGGIGNQ-----HI--PGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 39 ~~~~~~v~L~k~~----~glGf~i~gg~~~~-----~~--~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
+...+.|.|.+.. .+|||++.++.+.. +. +...+++|..|.++|||+++| |++||+|++|||.++.+
T Consensus 21 ~~~~~~v~l~~~~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~ 98 (139)
T 2vz5_A 21 QSMVQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTM 98 (139)
T ss_dssp -CEEEEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTT
T ss_pred CCceEEEEEEEcCCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEEcCC
Confidence 3467778887754 36999999876521 11 135789999999999999999 99999999999999984
No 147
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=98.65 E-value=1.4e-11 Score=85.61 Aligned_cols=60 Identities=37% Similarity=0.588 Sum_probs=51.7
Q ss_pred eEEEEEEEcCC-CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhh-cCCCCCCCEEEEECCeeccC
Q psy12206 41 KILDIELVKGN-KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQV-DGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 41 ~~~~v~L~k~~-~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~-~G~L~~GD~Il~VNG~~v~~ 106 (164)
.++++.|.|.. .+|||++.++.+. ..+++|..|.++|||++ +| |++||+|++|||.++.+
T Consensus 27 ~~~~v~l~k~~~~glG~~l~~g~~~-----~~gv~V~~V~~~spA~~~aG-L~~GD~Il~ING~~v~~ 88 (112)
T 2lob_A 27 GIRKVLLLKEDHEGLGISITGGKEH-----GVPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRD 88 (112)
Confidence 56678888866 7899999987642 35799999999999999 78 99999999999999965
No 148
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.06 E-value=4e-10 Score=79.63 Aligned_cols=74 Identities=27% Similarity=0.445 Sum_probs=57.6
Q ss_pred ccCceeeEEEeecccCCCCCceEEEEEEEcCC-CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEE
Q psy12206 20 NVGISKFMYVRRKKVTRQGNMKILDIELVKGN-KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIA 98 (164)
Q Consensus 20 ~~~~~~~~~v~~~~~~~~~~~~~~~v~L~k~~-~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~ 98 (164)
..+..+.+.+.|.- +.+++.+.... .+|||++.++.. ...+++|..|.++|||+++| |++||+|++
T Consensus 6 ~~g~~v~l~v~R~g-------~~~~v~v~~~~~~~lG~~~~~~~~-----~~~gv~V~~V~~~spA~~aG-L~~GD~I~~ 72 (128)
T 1uf1_A 6 SGDRRSTLHLLQGG-------DEKKVNLVLGDGRSLGLTIRGGAE-----YGLGIYITGVDPGSEAEGSG-LKVGDQILE 72 (128)
T ss_dssp STTTSCCSCCCCCS-------SEEEEEEECCSSCCCCEEEECCTT-----TTCCCEEEEECTTCHHHHHT-CCTTCEEEE
T ss_pred CCCCEEEEEEEeCC-------cEEEEEEEECCCCccCEEEECccc-----CCCCEEEEEECCCCHHHHCC-CCCCCEEEE
Confidence 35566666664422 45666776554 679999988643 23589999999999999999 999999999
Q ss_pred ECCeeccC
Q psy12206 99 VRNSTSED 106 (164)
Q Consensus 99 VNG~~v~~ 106 (164)
|||.++.+
T Consensus 73 vng~~v~~ 80 (128)
T 1uf1_A 73 VNGRSFLN 80 (128)
T ss_dssp ETTEECSS
T ss_pred ECCEECCC
Confidence 99999988
No 149
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=99.06 E-value=6.3e-10 Score=76.66 Aligned_cols=58 Identities=31% Similarity=0.625 Sum_probs=50.8
Q ss_pred EEEEEEEcCC-CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCC-CCCCEEEEECCeeccC
Q psy12206 42 ILDIELVKGN-KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRL-QVGDKLIAVRNSTSED 106 (164)
Q Consensus 42 ~~~v~L~k~~-~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L-~~GD~Il~VNG~~v~~ 106 (164)
+++|+|.|+. .+|||++.+..+ ..+++|..|.++|||+++| | ++||+|++|||.++.+
T Consensus 2 ~~~v~l~~~~~~glG~~~~~~~~------~~~~~V~~v~~~spA~~aG-ll~~GD~I~~ing~~v~~ 61 (112)
T 1qau_A 2 VISVRLFKRKVGGLGFLVKERVS------KPPVIISDLIRGGAAEQSG-LIQAGDIILAVNDRPLVD 61 (112)
T ss_dssp EEEEEEECBTTTBTSEEEEECSS------SSCEEEEEECTTSHHHHHT-CCCTTCEEEEETTEECTT
T ss_pred EEEEEEEcCCCCceeEEEEecCC------CCCEEEEEeCCCChHHHcC-CCCCCCEEEEECCEECCC
Confidence 5678898875 789999988642 3579999999999999999 7 9999999999999987
No 150
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.06 E-value=1.2e-10 Score=78.97 Aligned_cols=59 Identities=29% Similarity=0.493 Sum_probs=52.6
Q ss_pred CCceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 38 GNMKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 38 ~~~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.+++.+.+.|.+...+|||.+.+. .+++|..|.+++||+++| |++||+|++|||.++.+
T Consensus 12 ~~~~~~~v~l~~~~~g~G~~~~~~---------~~~~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~ 70 (100)
T 1whd_A 12 ENGEKLQITIRRGKDGFGFTICCD---------SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEH 70 (100)
T ss_dssp CCCEEEEEEEECCSSSSSCBCCCS---------SSCBCCBCCTTSHHHHHT-CCSSCEEEEETTEECTT
T ss_pred cccceEEEEEECCCCeeeEEEeCC---------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCC
Confidence 456888899999889999998763 468999999999999999 99999999999999985
No 151
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=99.06 E-value=6.1e-10 Score=77.64 Aligned_cols=56 Identities=34% Similarity=0.552 Sum_probs=48.3
Q ss_pred ceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 40 MKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 40 ~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.+.++|+|.|++.||||+|.++. .+.+|..|.+ +|+.+| |++||+|++|||.++.+
T Consensus 11 ~~~~~V~L~Kg~~G~GFsI~~~~--------~g~~V~~I~~--~~~~aG-L~~GD~Il~VNG~~v~~ 66 (113)
T 3soe_A 11 GLLVTIPLIKGPKGFGFAIADSP--------TGQKVKMILD--SQWCQG-LQKGDIIKEIYHQNVQN 66 (113)
T ss_dssp CEEEEEEEECBTTBSSEEEEEET--------TEEEEEEESC--GGGSTT-CCTTCEEEEETTEECTT
T ss_pred CCEEEEEEEECCCcccEEEeCCC--------CCcEEEEecC--hHHhCC-CCCCCEEEEECCEECCC
Confidence 37889999999999999997642 4678999988 577777 99999999999999997
No 152
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=99.06 E-value=8.3e-10 Score=93.86 Aligned_cols=111 Identities=19% Similarity=0.348 Sum_probs=78.6
Q ss_pred EEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC---Cc---------C
Q psy12206 42 ILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED---KR---------A 109 (164)
Q Consensus 42 ~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~---~~---------a 109 (164)
++.|.|.|+ .+|||++.++. +.|++|..|.+||||+++| |++||+|++|||.++.+ .+ .
T Consensus 2 ~r~V~l~k~-~~lG~~i~gg~-------~~Gi~V~~V~~gspA~~aG-L~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~ 72 (468)
T 3shw_A 2 MKLVKFRKG-DSVGLRLAGGN-------DVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPK 72 (468)
T ss_dssp EEEEEEECC-SSCCEEEEEET-------TTEEEEEEECSSSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCT
T ss_pred ceEEEEecC-CccceEEEccC-------cCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCC
Confidence 567888885 88999999874 3689999999999999999 99999999999999987 11 2
Q ss_pred CCceeEeeeccCCCCc---ccCCCCCeEEEEECCCChhhhcC-CCCCCCEEEEECC
Q psy12206 110 SPGIFLCNIAGGIGNQ---HIPGDNGIYVTKIMDGGAAQVDG-RLQVGDKLIAVRN 161 (164)
Q Consensus 110 ~~~v~l~~~~~~~~~~---~~~~~~gv~I~~v~~gs~A~~~G-~L~~GD~Il~VNg 161 (164)
...++|.-...+.... .......+||.......+....+ .++.||+|.-+|-
T Consensus 73 g~~v~L~V~r~g~~~~~~~~~~~g~s~yVralfdy~~~~~~~LsF~~GDIL~V~d~ 128 (468)
T 3shw_A 73 GEEVTILAQKKKDVYRRIVESDVGDSFYIRTHFEYEKESPYGLSFNKGEVFRVVDT 128 (468)
T ss_dssp TSEEEEEEEECHHHHHHHHHHTCCCCEEEEECSCBCCSSTTBCCBCTTCEEEEEES
T ss_pred CCEEEEEEEECCccchhhhccccccccccccccCcCCCCCCCceEccCCEEEEeec
Confidence 2335541111111000 00123478888888776665544 1599999988874
No 153
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.05 E-value=1.2e-10 Score=78.09 Aligned_cols=52 Identities=33% Similarity=0.555 Sum_probs=45.9
Q ss_pred cCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 49 KGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 49 k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
+++.+|||++.++.+ ...+++|..|.++|||+++| |++||+|++|||.++.+
T Consensus 13 ~~~~~lG~~l~~g~~-----~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~ 64 (94)
T 1vb7_A 13 AGPAPWGFRISGGRD-----FHTPIIVTKVTERGKAEAAD-LRPGDIIVAINGQSAEN 64 (94)
T ss_dssp CSSSCCSBCCEEETT-----TTEEEECCCBCTTSSHHHHT-CCTTCEEEEETTEECTT
T ss_pred cCCCCccEEEecccC-----CCCCeEEEEECCCCHHHHCC-CCCCCEEEEECCEECCC
Confidence 455789999998764 23689999999999999999 99999999999999977
No 154
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=99.04 E-value=3.7e-10 Score=76.93 Aligned_cols=65 Identities=22% Similarity=0.301 Sum_probs=51.2
Q ss_pred eEEEEEEEcCC-CCcCEEEecCCCC--CCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 41 KILDIELVKGN-KGLGFSIAGGIGN--QHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 41 ~~~~v~L~k~~-~glGf~i~gg~~~--~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.++++.|.|.. .+|||++.+.... .......+++|..|.+++||+++| |++||+|++|||+++.+
T Consensus 15 ~~~~v~l~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~ 82 (104)
T 2z17_A 15 QRKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAG-LQAGDVLANINGVSTEG 82 (104)
T ss_dssp CCCEEEEECCTTSCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHT-CCTTCBCCEETTEECTT
T ss_pred cceEEEEEeCCCCCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEEcCC
Confidence 45567788875 6799999983211 000134689999999999999999 99999999999999973
No 155
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=99.02 E-value=5.8e-10 Score=77.26 Aligned_cols=59 Identities=20% Similarity=0.348 Sum_probs=51.4
Q ss_pred eEEEEEEEcCC-CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 41 KILDIELVKGN-KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 41 ~~~~v~L~k~~-~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.++++.|.+.. .+|||.+....+ ..+++|..|.++|||+++| |++||+|++|||.++.+
T Consensus 13 dp~~~~l~~~~~~~~G~~l~~~~~------~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~ 72 (114)
T 2edz_A 13 NPRECKLSKQEGQNYGFFLRIEKD------TDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDK 72 (114)
T ss_dssp CCEEEEEECCTTCCCSCEEECCTT------CCSCEEECCCTTCTTGGGT-CCTTCEEEEESSSBCSS
T ss_pred CCEEEEEeCCCCCcccEEEEEecC------CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCC
Confidence 57788888875 789999987543 3679999999999999999 99999999999999977
No 156
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.02 E-value=1e-09 Score=72.73 Aligned_cols=51 Identities=25% Similarity=0.547 Sum_probs=44.0
Q ss_pred EEEEcCC--CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 45 IELVKGN--KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 45 v~L~k~~--~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
+.|.+.. .+|||.+.+ +++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 4 v~l~~~~~~~~~G~~~~~-----------gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~ 56 (88)
T 3e17_A 4 VLLMKSRANEEYGLRLGS-----------QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTEN 56 (88)
T ss_dssp EEEECBTTBCCCCEEEEE-----------EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTT
T ss_pred EEEEeCCCCCCCCEEEeC-----------CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC
Confidence 5565533 579999864 58999999999999999999999999999999965
No 157
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=99.02 E-value=8e-10 Score=82.95 Aligned_cols=53 Identities=43% Similarity=0.714 Sum_probs=46.7
Q ss_pred CCcCEEEecCCC---CCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 52 KGLGFSIAGGIG---NQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 52 ~glGf~i~gg~~---~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.||||+|.|+.+ .++...+.+++|..|.++|||++ | |++||+|++|||.++.+
T Consensus 2 ~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~-g-l~~GD~I~~vng~~v~~ 57 (195)
T 2qbw_A 2 PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFIN 57 (195)
T ss_dssp CCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTT
T ss_pred CcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh-C-CCCCCEEEEECCEECCC
Confidence 589999999864 34444568999999999999999 8 99999999999999987
No 158
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=99.00 E-value=2.2e-09 Score=71.04 Aligned_cols=56 Identities=29% Similarity=0.455 Sum_probs=46.7
Q ss_pred eEEEEEEEcCC---CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeecc
Q psy12206 41 KILDIELVKGN---KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSE 105 (164)
Q Consensus 41 ~~~~v~L~k~~---~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~ 105 (164)
..+.+.+.+.+ .+|||++... ..+++|..|.++|||+++| |++||+|++|||.++.
T Consensus 3 ~~~~~~~~~~~~~~~~lG~~~~~~--------~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~ 61 (90)
T 2eaq_A 3 SDMRISINQTPGKSLDFGFTIKWD--------IPGIFVASVEAGSPAEFSQ-LQVDDEIIAINNTKFS 61 (90)
T ss_dssp EEEEEEEECCTTCSSCCSEEEEEE--------TTEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECC
T ss_pred CceEEEEEecCCCCCcccEEEEec--------CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEEcc
Confidence 45667777655 2699998742 3589999999999999999 9999999999999993
No 159
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.99 E-value=1.4e-09 Score=76.73 Aligned_cols=50 Identities=28% Similarity=0.613 Sum_probs=44.6
Q ss_pred cCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 49 KGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 49 k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
+...+|||++.++.+ .+++|..|.|+|||+++| |++||+|++|||.++.+
T Consensus 36 ~~~~~lG~~l~~~~~-------~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~ 85 (124)
T 3tsv_A 36 RKGDSVGLRLAGGND-------VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTN 85 (124)
T ss_dssp ECSSCCCEEEEECTT-------SCEEEEEECTTCHHHHTT-CCTTEEEEEETTEECSS
T ss_pred CCCCceeEEEecCCC-------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCC
Confidence 445789999998643 689999999999999999 99999999999999977
No 160
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.98 E-value=2.8e-09 Score=71.81 Aligned_cols=58 Identities=29% Similarity=0.598 Sum_probs=49.4
Q ss_pred CCceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 38 GNMKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 38 ~~~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.+.+.++++|.|...+|||++.... .+++|..|.++ |+++| |++||+|++|||.++.+
T Consensus 7 ~~~~~~~v~l~~~~~g~G~~i~~~~--------~Gv~V~~v~~~--a~~aG-L~~GD~I~~vng~~v~~ 64 (96)
T 1ujv_A 7 GQAELMTLTIVKGAQGFGFTIADSP--------TGQRVKQILDI--QGCPG-LCEGDLIVEINQQNVQN 64 (96)
T ss_dssp CCCCCEEEEEECCSSSSSEEEEEET--------TEEEEEEESCG--GGSTT-CCSSCEEEEETTEECSS
T ss_pred CCceEEEEEEEeCCCceeEEEEcCC--------CCEEEEEEecc--cccCC-CCCCCEEEEECCEECCC
Confidence 3457788999999999999997532 47999999993 77888 99999999999999976
No 161
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.96 E-value=1.4e-10 Score=79.00 Aligned_cols=57 Identities=28% Similarity=0.469 Sum_probs=48.1
Q ss_pred EEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 43 LDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 43 ~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
+++.+ +...+|||++.++.+ ...+++|..|.++|||+++| |++||+|++|||.++.+
T Consensus 7 ~~v~~-~~~~~lG~~l~~g~~-----~~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~ 63 (103)
T 1v5l_A 7 GNVVL-PGPAPWGFRLSGGID-----FNQPLVITRITPGSKAAAAN-LCPGDVILAIDGFGTES 63 (103)
T ss_dssp BCCEE-ESSSCCSBCCEEETT-----TTEEEECSCBCTTSTTGGGT-CCTTCBEEEETTEECSS
T ss_pred EEEEE-cCCCCcCEEEecccc-----CCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCC
Confidence 34555 556789999998764 23579999999999999999 99999999999999987
No 162
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.95 E-value=3.5e-10 Score=76.16 Aligned_cols=56 Identities=25% Similarity=0.417 Sum_probs=48.8
Q ss_pred ceEEEEEEEcCC--CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 40 MKILDIELVKGN--KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 40 ~~~~~v~L~k~~--~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
..+++|+|.|.+ .+|||.+.+. .+++|..|.++|||+ +| |++||+|++|||.++.+
T Consensus 7 ~~~~~v~l~~~~~~~~~G~~l~~~---------~~~~V~~V~~~spA~-ag-L~~GD~Il~ing~~v~~ 64 (96)
T 2edv_A 7 GVRHTVKIDKDTLLQDYGFHISES---------LPLTVVAVTAGGSAH-GK-LFPGDQILQMNNEPAED 64 (96)
T ss_dssp CEEEEEEECCCSSSCSCSBCCCSS---------SSCBCCCBCSSSSST-TT-SCTTCBEEEESSCBSTT
T ss_pred CccEEEEEEECCCCCcccEEEecC---------CCeEEEEECCCCchh-hC-CCCCCEEEEECCEECCC
Confidence 467889998887 5799999762 578999999999995 77 99999999999999976
No 163
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.94 E-value=1.9e-09 Score=73.60 Aligned_cols=55 Identities=24% Similarity=0.426 Sum_probs=47.3
Q ss_pred EEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeecc
Q psy12206 42 ILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSE 105 (164)
Q Consensus 42 ~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~ 105 (164)
...+.|.+...+|||.+... ..+.+|..|.++|||+++| |++||+|++|||.++.
T Consensus 18 ~~~l~l~~~~~g~G~~l~~~--------~~~~~I~~V~~gSpA~~AG-L~~GD~I~~Ing~~v~ 72 (101)
T 3qik_A 18 AKRLLILPQEEDYGFDIEEK--------NKAVVVKSVQRGSLAEVAG-LQVGRKIYSINEDLVF 72 (101)
T ss_dssp EEEEEECCCSSSSSEEEEEE--------TTEEEEEEECTTSHHHHHT-CCTTCBEEEETTEEST
T ss_pred cCeEEEEeCCCcccEEEEcc--------CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEEcC
Confidence 44567777778999999863 2568999999999999999 9999999999999985
No 164
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=98.93 E-value=2.1e-09 Score=73.58 Aligned_cols=49 Identities=67% Similarity=1.109 Sum_probs=42.0
Q ss_pred eeeccCCCCcccCCCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 116 CNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 116 ~~~~~~~~~~~~~~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
|++.+|.+....+...|++|.+|.++|||+++|+|++||+|++|||++|
T Consensus 17 f~i~gG~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v 65 (106)
T 4amh_A 17 FSIAGGVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVAL 65 (106)
T ss_dssp EEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEEC
T ss_pred EEEEeccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEEC
Confidence 5666677665555567999999999999999999999999999999875
No 165
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.92 E-value=1e-09 Score=84.55 Aligned_cols=61 Identities=20% Similarity=0.395 Sum_probs=54.1
Q ss_pred CceEEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 39 NMKILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 39 ~~~~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
...++.|+|.++..||||.+.++.+ ..+++|..|.+++||+++| |++||+|++|||.++.+
T Consensus 7 ~~~~r~v~l~k~~~glG~~l~~~~~------~~gv~V~~V~~gSpA~~aG-L~~GD~Il~VNG~~V~~ 67 (216)
T 2krg_A 7 MLRPRLCTMKKGPSGYGFNLHSDKS------KPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEG 67 (216)
T ss_dssp TCCCEEEEEECCSSSSCEEECCCSS------SCSCBEEEECTTSHHHHHT-CCTTCBCCEETTEECTT
T ss_pred ccceEEEEEEeCCCCceEEEEecCC------CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCC
Confidence 4567889999998999999988653 3579999999999999999 99999999999999983
No 166
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.92 E-value=5e-09 Score=69.86 Aligned_cols=52 Identities=27% Similarity=0.489 Sum_probs=41.7
Q ss_pred EEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 42 ILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 42 ~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
...+...+...+|||.+.+ + +|..|.++|||+++| |++||+|++|||.++.+
T Consensus 14 ~~~i~~~~~~~~lG~~~~~-----------G-~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~ 65 (90)
T 1y7n_A 14 TVLIRRPDLRYQLGFSVQN-----------G-IICSLMRGGIAERGG-VRVGHRIIEINGQSVVA 65 (90)
T ss_dssp EEEEEESSTTSCCCEEEET-----------T-EEEEECTTSHHHHHT-CCSSCEEEEETTEECTT
T ss_pred eEEEEeCCCccccCeEecC-----------C-EEEEECCCCHHHHcC-CCCCCEEEEECCEECCC
Confidence 3333333334789999853 2 899999999999999 99999999999999964
No 167
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.91 E-value=2.1e-09 Score=75.53 Aligned_cols=66 Identities=24% Similarity=0.530 Sum_probs=54.3
Q ss_pred CCceEEEEEEEcCC--CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 38 GNMKILDIELVKGN--KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 38 ~~~~~~~v~L~k~~--~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.+.+...+.+.+.. .+|||++....... ...+++|..|.+++||+++|+|++||+|++|||.++.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~lG~~~~~~~~~~---~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~ 83 (124)
T 1wh1_A 16 EELELEEVDLYRMNSQDKLGLTVCYRTDDE---DDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN 83 (124)
T ss_dssp SSCEECCBCCCCSSTTCCCCEEEECCCCCS---SCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCS
T ss_pred CcceEEEEEEEecCCCCcccEEEEecCCCC---CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC
Confidence 44567777777765 47999998765432 23689999999999999999999999999999999987
No 168
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=98.91 E-value=1.1e-08 Score=88.39 Aligned_cols=92 Identities=10% Similarity=0.148 Sum_probs=66.5
Q ss_pred CCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC-Cc-------------------CCCceeE------------ee
Q psy12206 70 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED-KR-------------------ASPGIFL------------CN 117 (164)
Q Consensus 70 ~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~-~~-------------------a~~~v~l------------~~ 117 (164)
..|++|..|.|+|||++ + |++||.|++|||+.+.+ .+ .+..++| ..
T Consensus 276 ~~Gv~V~~V~~~spA~~-a-l~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~R~Gk~~~v~Vt 353 (539)
T 4fln_A 276 NEGVLVRRVEPTSDASK-V-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGEHKKVQVV 353 (539)
T ss_dssp SBCEEEEEECTTSGGGG-T-CCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHTSCTTCEEEEEEEETTEEEEEEEE
T ss_pred cCceeeecccCCChHHh-C-ccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHcCCCCCEEEEEEEECCEEEEEEEE
Confidence 46899999999999986 4 99999999999999965 11 1111222 00
Q ss_pred e--------------------ccCC-------------CC---------------cccCCCCCeEEEEECCCChhhhcCC
Q psy12206 118 I--------------------AGGI-------------GN---------------QHIPGDNGIYVTKIMDGGAAQVDGR 149 (164)
Q Consensus 118 ~--------------------~~~~-------------~~---------------~~~~~~~gv~I~~v~~gs~A~~~G~ 149 (164)
+ .+|+ +. .......+++|+.|.++++|...|
T Consensus 354 l~~~~~~~~~~~~~~~p~~~~~~Gl~f~~Lt~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gVvvs~V~~~s~a~~~g- 432 (539)
T 4fln_A 354 LRPRVHLVPYHIDGGQPSYIIVAGLVFTPLSEPLIEEECEDTIGLKLLTKARYSVARFRGEQIVILSQVLANEVNIGYE- 432 (539)
T ss_dssp CBCCCCSSCSCTTSSCCCCCCSTTEEEEECCHHHHTTSCSSSSCHHHHHHHHHCCCSSTTCCCEEEEEECCCGGGTTCS-
T ss_pred EccCccccccccccCCCccccccceEEeeCCHHHHHhhcccccCceeeehhhhhhhccCCceEEEEEEecCCchhhhcC-
Confidence 0 0000 00 001234589999999999999999
Q ss_pred CCCCCEEEEECCEeC
Q psy12206 150 LQVGDKLIAVRNSTR 164 (164)
Q Consensus 150 L~~GD~Il~VNg~~v 164 (164)
++.||+|++|||++|
T Consensus 433 ~~~gdiI~~vNg~~V 447 (539)
T 4fln_A 433 DMNNQQVLKFNGIPI 447 (539)
T ss_dssp SCCSEEEEEETTEEC
T ss_pred CCCCCEEEeECCEEc
Confidence 999999999999986
No 169
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.91 E-value=2.8e-10 Score=78.91 Aligned_cols=54 Identities=19% Similarity=0.340 Sum_probs=47.9
Q ss_pred EEEEEEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeecc
Q psy12206 42 ILDIELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSE 105 (164)
Q Consensus 42 ~~~v~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~ 105 (164)
+++|+|.|+..+|||.+.+. .+++|..|.+++||+++| |++||+|++|||.++.
T Consensus 16 ~r~v~l~~~~~~~G~~l~~~---------~~v~V~~V~~~spA~~aG-L~~GD~Il~InG~~v~ 69 (111)
T 1vae_A 16 PRGIHFTVEEGDLGFTLRGN---------TPVQVHFLDPHCSASLAG-AKEGDYIVSIQGVDCK 69 (111)
T ss_dssp CCCCCEECCSSCCSCCEESS---------SSCEECCCCTTSSHHHHH-CCTTCEEEEETTEECS
T ss_pred CeEEEEEcCCCcccEEEeCC---------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECC
Confidence 45588888888999999653 467999999999999999 9999999999999998
No 170
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.88 E-value=9.9e-10 Score=77.41 Aligned_cols=59 Identities=31% Similarity=0.619 Sum_probs=52.0
Q ss_pred eEEEEEEEcCC-CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCC-CCCCEEEEECCeeccC
Q psy12206 41 KILDIELVKGN-KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRL-QVGDKLIAVRNSTSED 106 (164)
Q Consensus 41 ~~~~v~L~k~~-~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L-~~GD~Il~VNG~~v~~ 106 (164)
++++++|.++. .+|||++.+..+ ..+++|..|.++|||+++| | ++||+|++|||.++.+
T Consensus 8 ~~~~v~l~~~~~~glG~~~~~~~~------~~~~~V~~V~~~spA~~aG-ll~~GD~I~~ing~~v~~ 68 (127)
T 1b8q_A 8 NVISVRLFKRKVGGLGFLVKERVS------KPPVIISDLIRGGAAEQSG-LIQAGDIILAVNDRPLVD 68 (127)
T ss_dssp CSEEEEEECTTTSCCSCCEEECTT------SSCEEECCCSSSSSHHHHS-SCCTTTCCCEETTEECSS
T ss_pred ceEEEEEEeCCCCcEeEEEEecCC------CCCEEEEEeCCCCHHHHcC-CCCCCCEEEEECCEECCC
Confidence 57778998887 799999987642 3579999999999999999 7 9999999999999987
No 171
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=98.83 E-value=8.6e-09 Score=68.56 Aligned_cols=37 Identities=68% Similarity=1.154 Sum_probs=33.7
Q ss_pred CCCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 128 PGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 128 ~~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
....|++|..|.++|||+++|+|++||+|++|||+++
T Consensus 30 ~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v 66 (94)
T 2fe5_A 30 PGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNL 66 (94)
T ss_dssp TTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEEC
T ss_pred CCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEC
Confidence 3456999999999999999999999999999999875
No 172
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=98.80 E-value=1.2e-08 Score=69.54 Aligned_cols=35 Identities=63% Similarity=1.017 Sum_probs=32.9
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|.+|.++|||+++|+|++||+|++|||+++
T Consensus 32 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v 66 (105)
T 2awx_A 32 DNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSL 66 (105)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEEC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEEC
Confidence 45999999999999999999999999999999875
No 173
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=98.79 E-value=1.5e-08 Score=68.53 Aligned_cols=36 Identities=47% Similarity=0.777 Sum_probs=33.4
Q ss_pred CCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 129 GDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 129 ~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
...|++|..|.++|||+++|+|++||+|++|||+++
T Consensus 32 ~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v 67 (102)
T 2i1n_A 32 DDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDV 67 (102)
T ss_dssp TCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEEC
T ss_pred CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEEC
Confidence 356999999999999999999999999999999875
No 174
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=98.79 E-value=9.9e-09 Score=67.93 Aligned_cols=51 Identities=25% Similarity=0.353 Sum_probs=39.3
Q ss_pred eeEeeeccCCCCcccCC--CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 113 IFLCNIAGGIGNQHIPG--DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 113 v~l~~~~~~~~~~~~~~--~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
++|.....++|+..... ..|++|..|.++|||+++| |++||+|++|||+++
T Consensus 7 v~l~r~~~g~G~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v 59 (91)
T 1g9o_A 7 CCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAG-LLAGDRLVEVNGENV 59 (91)
T ss_dssp EEEECBTTBCCEEEEECTTCSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEEC
T ss_pred EEEEeCCCcccEEEEecCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEEC
Confidence 34433344566544322 3599999999999999999 999999999999875
No 175
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.77 E-value=2.5e-08 Score=65.96 Aligned_cols=53 Identities=28% Similarity=0.504 Sum_probs=45.0
Q ss_pred EEEEEEEcCC--CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeecc
Q psy12206 42 ILDIELVKGN--KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSE 105 (164)
Q Consensus 42 ~~~v~L~k~~--~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~ 105 (164)
+.++.+.+.. ..|||.+. .+++|..|.++|||+++|+|++||+|++|||.++.
T Consensus 3 ~~~v~~~~~~~~~~~g~~~~-----------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~ 57 (92)
T 3cyy_A 3 PTKVTLVKSAKNEEYGLRLA-----------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTE 57 (92)
T ss_dssp CEEEEEECSSTTSCCCEEEE-----------EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECT
T ss_pred cEEEEEEeCCCCCCCCEEEe-----------CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECC
Confidence 4556666644 57999875 26899999999999999999999999999999998
No 176
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=98.76 E-value=1.8e-08 Score=70.23 Aligned_cols=36 Identities=72% Similarity=1.089 Sum_probs=33.3
Q ss_pred CCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 129 GDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 129 ~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
...|++|.+|.++|||+++|+|++||+|++|||+++
T Consensus 52 ~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v 87 (117)
T 2byg_A 52 GDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSL 87 (117)
T ss_dssp TBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEEC
T ss_pred CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC
Confidence 346899999999999999999999999999999875
No 177
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=98.75 E-value=8.6e-09 Score=70.71 Aligned_cols=45 Identities=20% Similarity=0.406 Sum_probs=37.3
Q ss_pred cCCCCcccCCCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 120 GGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 120 ~~~~~~~~~~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.++|+.......|++|.+|.++|||+++|+|++||+|++|||+++
T Consensus 14 ~glG~~i~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v 58 (106)
T 2la8_A 14 KELGLSLSPNEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDAL 58 (106)
T ss_dssp STTCCEEEECSSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBC
T ss_pred CccCEEEEeCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEEC
Confidence 345554333456999999999999999999999999999999875
No 178
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=98.75 E-value=1.7e-08 Score=67.14 Aligned_cols=44 Identities=34% Similarity=0.496 Sum_probs=36.8
Q ss_pred CCCCcccCC--CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 121 GIGNQHIPG--DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 121 ~~~~~~~~~--~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
++|+..... ..+++|..|.++|||+++|+|++||+|++|||+++
T Consensus 16 ~lG~~i~~~~~~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v 61 (93)
T 3o46_A 16 PLGATIKKDEQTGAIIVARIMRGGAADRSGLIHVGDELREVNGIPV 61 (93)
T ss_dssp CCCEEEEECTTTCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEES
T ss_pred CccEEEEecCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC
Confidence 455543333 46899999999999999999999999999999875
No 179
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=98.75 E-value=7.7e-09 Score=68.91 Aligned_cols=51 Identities=24% Similarity=0.364 Sum_probs=39.7
Q ss_pred eeEeeeccCCCCcccCCC--CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 113 IFLCNIAGGIGNQHIPGD--NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 113 v~l~~~~~~~~~~~~~~~--~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
+.|.....++|+...... .+++|..|.++|||+++| |++||+|++|||+++
T Consensus 9 v~l~~~~~~~G~~l~~~~~~~~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v 61 (95)
T 3r68_A 9 VVIKKGSNGYGFYLRAGPEQKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSV 61 (95)
T ss_dssp EEEECBTTBCSCEEEEC--CCSEEEECCCTTSHHHHHT-CCTTEEEEEETTEEC
T ss_pred EEEecCCCcccEEEEecCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEEC
Confidence 344444456666554333 399999999999999999 999999999999875
No 180
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=98.74 E-value=1.6e-08 Score=66.82 Aligned_cols=51 Identities=25% Similarity=0.353 Sum_probs=39.2
Q ss_pred eeEeeeccCCCCcccCC--CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 113 IFLCNIAGGIGNQHIPG--DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 113 v~l~~~~~~~~~~~~~~--~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
++|.+...++|+..... ..|++|..|.++|||+++| |++||+|++|||+++
T Consensus 8 v~l~k~~~g~G~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v 60 (90)
T 2he4_A 8 CHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG-LRAQDRLIEVNGQNV 60 (90)
T ss_dssp EEEECBTTBCCEEEEECSSSSSEEEEEECTTSHHHHHT-CCTTCEEEEETTEEC
T ss_pred EEEEECCCCccEEEEccCCCCCEEEEEECCCChHHHCC-CCCCCEEEEECCEEC
Confidence 34444444556544322 3589999999999999999 999999999999875
No 181
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=98.74 E-value=2.5e-08 Score=67.28 Aligned_cols=35 Identities=51% Similarity=0.899 Sum_probs=32.8
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|..|.++|||+++|+|++||+|++|||+++
T Consensus 36 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v 70 (101)
T 2jik_A 36 DSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDL 70 (101)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEEC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEEC
Confidence 46999999999999999999999999999999875
No 182
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=98.74 E-value=1.8e-08 Score=66.46 Aligned_cols=34 Identities=44% Similarity=0.703 Sum_probs=32.2
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.+++|.+|.++|||+++|+|++||+|++|||+++
T Consensus 27 ~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v 60 (90)
T 2q9v_A 27 EPIYIGHIVPLGAADTDGRLRSGDELISVDGTPV 60 (90)
T ss_dssp SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEEC
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEEC
Confidence 5799999999999999999999999999999875
No 183
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.72 E-value=7.8e-08 Score=72.27 Aligned_cols=82 Identities=20% Similarity=0.307 Sum_probs=61.6
Q ss_pred CceeeEEEeecccCCC-CCceEEEEEEEcCC-CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEE
Q psy12206 22 GISKFMYVRRKKVTRQ-GNMKILDIELVKGN-KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAV 99 (164)
Q Consensus 22 ~~~~~~~v~~~~~~~~-~~~~~~~v~L~k~~-~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~V 99 (164)
+..+.+.+.|...... ......++.|.+.. ..|||++....... ...+++|..|.++|||+++|+|++||+|++|
T Consensus 87 g~~v~l~v~R~~~~~~~~~~~~~~v~l~~~~~~~lG~~~~~~~~~~---~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~v 163 (196)
T 1p1d_A 87 TSKVTLEIEFDVAESVIPSSGTFHVKLPKKHSVELGITISSPSSRK---PGDPLVISDIKKGSVAHRTGTLELGDKLLAI 163 (196)
T ss_dssp SSEEEEEEEECSCSCCBCCSSCEEEEECCCSSCCCCCEEECSCSSS---TTCCCEEEECCSSSHHHHTSCCCTTCEEEEE
T ss_pred CCeEEEEEEecCCCCCCCCCCcEEEEecCCCCCCcCEEEECCCCCC---CCCCEEEEEECCCCcHHhcCCCCCCCEEEEE
Confidence 7889999987653211 11134567776543 67999998754322 1368999999999999999999999999999
Q ss_pred CCeeccC
Q psy12206 100 RNSTSED 106 (164)
Q Consensus 100 NG~~v~~ 106 (164)
||.++.+
T Consensus 164 ng~~v~~ 170 (196)
T 1p1d_A 164 DNIRLDS 170 (196)
T ss_dssp TTEEGGG
T ss_pred CCEECCC
Confidence 9999976
No 184
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=98.72 E-value=2.2e-08 Score=67.12 Aligned_cols=34 Identities=32% Similarity=0.552 Sum_probs=32.3
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.|++|.+|.++|||+++|+|++||+|++|||+++
T Consensus 30 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v 63 (98)
T 2opg_A 30 GAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDL 63 (98)
T ss_dssp CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEEC
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEEEECCEEC
Confidence 5999999999999999999999999999999875
No 185
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=98.71 E-value=1.7e-08 Score=68.32 Aligned_cols=52 Identities=29% Similarity=0.614 Sum_probs=39.7
Q ss_pred eeEeeeccCCCCcccCC--CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 113 IFLCNIAGGIGNQHIPG--DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 113 v~l~~~~~~~~~~~~~~--~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
++|.+...++|+..... ..|++|..|.++|||+++|+|++||+|++|||+++
T Consensus 15 v~l~k~~~glG~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v 68 (104)
T 3i4w_A 15 IVIHRGSTGLGFNIVGGEXGEGIFISFILAGGPADLSGELRKGDQILSVNGVDL 68 (104)
T ss_dssp EEEECBTTBTSEEEEECC-CCCEEEEEECTTSHHHHHCCCCTTEEEEEETTEEC
T ss_pred EEEEeCCCccCEEEECCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEEC
Confidence 34433334555544322 24999999999999999999999999999999875
No 186
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=98.70 E-value=3e-08 Score=66.47 Aligned_cols=44 Identities=23% Similarity=0.456 Sum_probs=36.4
Q ss_pred CCCCcccCC---CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 121 GIGNQHIPG---DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 121 ~~~~~~~~~---~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
++|+..... ..+++|..|.++|||+++|+|++||+|++|||+++
T Consensus 17 ~lG~~i~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v 63 (97)
T 1n7e_A 17 PLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSL 63 (97)
T ss_dssp CCCEEEECCSSTTSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEEC
T ss_pred CcCEEEEcccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEEC
Confidence 455544332 25899999999999999999999999999999875
No 187
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=98.69 E-value=8.9e-09 Score=69.13 Aligned_cols=44 Identities=20% Similarity=0.423 Sum_probs=36.5
Q ss_pred CCCCcccCCCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 121 GIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 121 ~~~~~~~~~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
++|+.......|++|.+|.++|||+++|+|++||+|++|||+++
T Consensus 21 glG~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v 64 (96)
T 2qkv_A 21 ELGLSLSPNEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDAL 64 (96)
T ss_dssp CCCEEEEECSSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEEC
T ss_pred CccEEEEeCCCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEEC
Confidence 44443333446899999999999999998999999999999975
No 188
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=98.69 E-value=3.2e-08 Score=64.59 Aligned_cols=35 Identities=23% Similarity=0.536 Sum_probs=32.4
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..+++|..|.++|||+++|+|++||+|++|||+++
T Consensus 24 ~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v 58 (85)
T 2i04_A 24 DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCV 58 (85)
T ss_dssp TBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEEC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEC
Confidence 35799999999999999999999999999999875
No 189
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=98.69 E-value=2.9e-08 Score=66.18 Aligned_cols=35 Identities=29% Similarity=0.717 Sum_probs=32.9
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|.+|.++|||+++|+|++||+|++|||+++
T Consensus 28 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v 62 (95)
T 2vwr_A 28 EPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDL 62 (95)
T ss_dssp SCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEEC
T ss_pred CCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEEC
Confidence 45999999999999999999999999999999875
No 190
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.68 E-value=3.2e-08 Score=67.13 Aligned_cols=35 Identities=31% Similarity=0.498 Sum_probs=32.8
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..+++|..|.++|||+++|+|++||+|++|||++|
T Consensus 33 ~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v 67 (103)
T 1uep_A 33 GQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPV 67 (103)
T ss_dssp TSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEEC
T ss_pred CCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEEC
Confidence 45899999999999999999999999999999875
No 191
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=98.68 E-value=4.3e-08 Score=66.13 Aligned_cols=52 Identities=17% Similarity=0.312 Sum_probs=40.1
Q ss_pred eeEeeeccCCCCcccC-CCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 113 IFLCNIAGGIGNQHIP-GDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 113 v~l~~~~~~~~~~~~~-~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
|+|.+...++|++... +...+||..|.++|+|+++|.|++||.|++|||+++
T Consensus 9 V~l~K~~~~LG~tI~~~g~g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v 61 (95)
T 3gge_A 9 VNVYKSEDSLGLTITDNGVGYAFIKRIKDGGVIDSVKTICVGDHIESINGENI 61 (95)
T ss_dssp EEEECCSSCCCEEEECSSSSCCEEEEECTTSHHHHCTTCCTTCEEEEETTEEC
T ss_pred EEEEECCCCceEEEEcCCCCcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEc
Confidence 3443434455554432 345689999999999999999999999999999986
No 192
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.68 E-value=1.4e-08 Score=69.17 Aligned_cols=45 Identities=24% Similarity=0.381 Sum_probs=37.4
Q ss_pred ccCCCCcccCCCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 119 AGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 119 ~~~~~~~~~~~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..++|+.......+.+|.+|.++|||+++| |++||+|++|||++|
T Consensus 27 ~~g~G~~l~~~~~~~~I~~V~~gSpA~~AG-L~~GD~I~~Ing~~v 71 (101)
T 3qik_A 27 EEDYGFDIEEKNKAVVVKSVQRGSLAEVAG-LQVGRKIYSINEDLV 71 (101)
T ss_dssp SSSSSEEEEEETTEEEEEEECTTSHHHHHT-CCTTCBEEEETTEES
T ss_pred CCcccEEEEccCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEEc
Confidence 446666544445588899999999999999 999999999999874
No 193
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.67 E-value=4.2e-08 Score=68.59 Aligned_cols=63 Identities=11% Similarity=0.193 Sum_probs=44.6
Q ss_pred eEEEEEEEcCC-CCcCEEEecCCCCCCCCCCCcEEEEEeCC--CChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 41 KILDIELVKGN-KGLGFSIAGGIGNQHIPGDNGIYVTKIMD--GGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 41 ~~~~v~L~k~~-~glGf~i~gg~~~~~~~~~~gv~V~~V~~--gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
....+.+.+.. +.|||.+....... ....+++|..|.+ ++||+++| |++||+|++|||.++.+
T Consensus 15 ~v~l~~~~~~~~g~~G~~v~l~~~~~--~~~~gv~V~~V~~~~~spA~~aG-L~~GD~Il~Vng~~v~~ 80 (118)
T 2yub_A 15 SVTLISMPATTECRRGFSVTVESASS--NYATTVQVKEVNRMHISPNNRNA-IHPGDRILEINGTPVRT 80 (118)
T ss_dssp EEEEEEECSCSSSSCSSEEEEECTTS--SSCCEEEEEECCTTTSCTTHHHH-CCTTCCEEEESSSBTTT
T ss_pred eeEEeccCCccCCCceEEEEeccccc--cCCCcEEEEEecCCCCChHHHcC-CCCCCEEEEECCEECCC
Confidence 33334443333 34676665322111 1347899999999 99999999 99999999999999976
No 194
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.67 E-value=1.8e-08 Score=69.03 Aligned_cols=35 Identities=26% Similarity=0.431 Sum_probs=32.8
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..+++|..|.+++||+++|+|++||+|++|||+++
T Consensus 43 ~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v 77 (108)
T 2d92_A 43 RSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCL 77 (108)
T ss_dssp CEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEEC
Confidence 46899999999999999999999999999999875
No 195
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=98.67 E-value=2.6e-08 Score=66.00 Aligned_cols=51 Identities=25% Similarity=0.393 Sum_probs=38.8
Q ss_pred eeEeeeccCCCCcccC--CCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 113 IFLCNIAGGIGNQHIP--GDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 113 v~l~~~~~~~~~~~~~--~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
++|.+...++|+.... ...+++|..|.++|||+++| |++||+|++|||+++
T Consensus 7 v~l~k~~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v 59 (91)
T 2vsp_A 7 CRLAKGENGYGFHLNAIRGLPGSFIKEVQKGGPADLAG-LEDEDVIIEVNGVNV 59 (91)
T ss_dssp EEEECBTTBTSCCCBCCTTCSCCBC-CCCTTSHHHHTT-CCTTCEEEEETTEEC
T ss_pred EEEEeCCCcccEEEEeccCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEEC
Confidence 3343444456665532 34689999999999999999 999999999999875
No 196
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=98.67 E-value=3.7e-08 Score=65.28 Aligned_cols=44 Identities=25% Similarity=0.351 Sum_probs=36.1
Q ss_pred ccCCCCcccCCCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 119 AGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 119 ~~~~~~~~~~~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..++|+.... ..+++|..|.++|||+++| |++||+|++|||+++
T Consensus 13 ~~g~G~~l~~-~~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v 56 (91)
T 2f5y_A 13 KDGFGFTICC-DSPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPV 56 (91)
T ss_dssp TTBTSEEEEC-SSSCEEEEECTTSHHHHHT-CCTTCEEEEETTEEC
T ss_pred CCCccEEEec-CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEEC
Confidence 3455554332 3579999999999999999 999999999999875
No 197
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=98.67 E-value=3e-08 Score=65.70 Aligned_cols=35 Identities=40% Similarity=0.807 Sum_probs=32.8
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|.+|.++|||+++|+|++||+|++|||+++
T Consensus 28 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v 62 (92)
T 2qg1_A 28 DTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDV 62 (92)
T ss_dssp SCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEEC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC
Confidence 45999999999999999999999999999999875
No 198
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.67 E-value=5.8e-08 Score=67.61 Aligned_cols=35 Identities=51% Similarity=0.899 Sum_probs=33.0
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..+++|..|.+++||+++|+|++||+|++|||++|
T Consensus 46 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v 80 (120)
T 2eno_A 46 DSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDL 80 (120)
T ss_dssp CCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEEC
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEEC
Confidence 56999999999999999999999999999999875
No 199
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=98.67 E-value=4.2e-08 Score=65.79 Aligned_cols=43 Identities=19% Similarity=0.383 Sum_probs=35.3
Q ss_pred CCCCcccCC--CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 121 GIGNQHIPG--DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 121 ~~~~~~~~~--~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
++|+..... ..|++|..|.++|||+++| |++||+|++|||+++
T Consensus 21 g~G~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v 65 (98)
T 2jxo_A 21 GYGFNLHSDKSKPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCM 65 (98)
T ss_dssp CCCEEEECCCSSSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEEC
T ss_pred cccEEEEecCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEEC
Confidence 455443322 2499999999999999999 999999999999875
No 200
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.66 E-value=2e-08 Score=69.76 Aligned_cols=34 Identities=29% Similarity=0.540 Sum_probs=32.2
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.|++|..|.++|||+++|+|++||+|++|||+++
T Consensus 49 ~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v 82 (117)
T 1ujd_A 49 IGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPL 82 (117)
T ss_dssp EEEEEEEECTTCHHHHHSSCCTTCEEEEETTEEC
T ss_pred cCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEc
Confidence 4899999999999999999999999999999985
No 201
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=98.66 E-value=2.1e-08 Score=67.13 Aligned_cols=35 Identities=26% Similarity=0.527 Sum_probs=32.6
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|.+|.++|||+++|+|++||+|++|||+++
T Consensus 31 ~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v 65 (97)
T 2jil_A 31 SRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRL 65 (97)
T ss_dssp CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEEC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEEC
Confidence 35899999999999999998999999999999875
No 202
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=98.66 E-value=3.5e-08 Score=65.94 Aligned_cols=34 Identities=35% Similarity=0.736 Sum_probs=32.1
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|..|.++|||+++| |++||+|++|||+++
T Consensus 33 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v 66 (97)
T 2w4f_A 33 DEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVAL 66 (97)
T ss_dssp BCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEEC
T ss_pred CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEEC
Confidence 4699999999999999999 999999999999875
No 203
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=98.65 E-value=5.4e-08 Score=66.35 Aligned_cols=35 Identities=37% Similarity=0.714 Sum_probs=32.8
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|..|.++|||+++|+|++||+|++|||+++
T Consensus 43 ~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v 77 (108)
T 2jre_A 43 ATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNV 77 (108)
T ss_dssp CCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEEC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEEC
Confidence 45999999999999999999999999999999875
No 204
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=98.65 E-value=5.9e-08 Score=64.74 Aligned_cols=35 Identities=40% Similarity=0.762 Sum_probs=32.7
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|.+|.++|||+++|+|++||+|++|||+++
T Consensus 32 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v 66 (96)
T 1d5g_A 32 HGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSL 66 (96)
T ss_dssp SSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEEC
T ss_pred cCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEEC
Confidence 35999999999999999999999999999999875
No 205
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.65 E-value=1.9e-08 Score=68.72 Aligned_cols=35 Identities=43% Similarity=0.753 Sum_probs=32.8
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|..|.++|||+++|+|++||+|++|||+++
T Consensus 39 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v 73 (107)
T 1wf8_A 39 KLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISL 73 (107)
T ss_dssp EEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEEC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEEC
Confidence 45899999999999999999999999999999875
No 206
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=98.65 E-value=1.7e-08 Score=69.47 Aligned_cols=35 Identities=43% Similarity=0.748 Sum_probs=32.9
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|.+|.++|||+++|+|++||+|++|||+++
T Consensus 34 ~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v 68 (113)
T 2g5m_B 34 KLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSL 68 (113)
T ss_dssp CEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEEC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC
Confidence 45999999999999999999999999999999875
No 207
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=98.65 E-value=5.3e-08 Score=68.04 Aligned_cols=35 Identities=37% Similarity=0.592 Sum_probs=32.9
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|.+|.++|||+++|+|++||+|++|||+++
T Consensus 52 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v 86 (118)
T 3b76_A 52 DLPIYVISVEPGGVISRDGRIKTGDILLNVDGVEL 86 (118)
T ss_dssp CCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEG
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEEC
Confidence 46899999999999999999999999999999875
No 208
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=98.65 E-value=3.3e-08 Score=67.78 Aligned_cols=35 Identities=46% Similarity=0.828 Sum_probs=33.1
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|.+|.++|||+++|+|++||+|++|||+++
T Consensus 32 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v 66 (108)
T 3cbz_A 32 DGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNF 66 (108)
T ss_dssp CCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEET
T ss_pred CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEEC
Confidence 56999999999999999999999999999999975
No 209
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.65 E-value=2.1e-08 Score=66.17 Aligned_cols=42 Identities=31% Similarity=0.423 Sum_probs=34.7
Q ss_pred CCCcccCCCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 122 IGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 122 ~~~~~~~~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
+|+.......|++|..|.++|||+++| |++||+|++|||+++
T Consensus 19 lG~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v 60 (90)
T 2eaq_A 19 FGFTIKWDIPGIFVASVEAGSPAEFSQ-LQVDDEIIAINNTKF 60 (90)
T ss_dssp CSEEEEEETTEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEC
T ss_pred ccEEEEecCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEEc
Confidence 343333334589999999999999999 999999999999875
No 210
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.65 E-value=1.2e-07 Score=60.87 Aligned_cols=43 Identities=28% Similarity=0.537 Sum_probs=39.3
Q ss_pred CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeecc
Q psy12206 52 KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSE 105 (164)
Q Consensus 52 ~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~ 105 (164)
..|||.+.. +++|..|.++|||+++|+|++||+|++|||.++.
T Consensus 13 ~~~g~~~~~-----------gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~ 55 (81)
T 2rcz_A 13 EEYGLRLAS-----------HIFVKEISQDSLAARDGNIQEGDVVLKINGTVTE 55 (81)
T ss_dssp CCCCEEEEE-----------EEEEEEECTTSHHHHHSSCCTTCEEEEETTEECT
T ss_pred CCCCEEEeC-----------CEEEEEECCCChHHHCCCCCCCCEEEEECCEECC
Confidence 679998762 5899999999999999999999999999999998
No 211
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=98.65 E-value=2.9e-08 Score=65.63 Aligned_cols=34 Identities=26% Similarity=0.537 Sum_probs=32.0
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.|++|.+|.++|||+++|+|++||+|++|||+++
T Consensus 21 ~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v 54 (88)
T 3e17_A 21 SQIFVKEMTRTGLATKDGNLHEGDIILKINGTVT 54 (88)
T ss_dssp EEEEEEEECTTSHHHHHCCCCTTCEEEEETTEEC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC
Confidence 3899999999999999999999999999999875
No 212
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=98.64 E-value=2.3e-08 Score=65.07 Aligned_cols=49 Identities=22% Similarity=0.306 Sum_probs=38.4
Q ss_pred eEeeeccCCCCcccCCCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 114 FLCNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 114 ~l~~~~~~~~~~~~~~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
+|.....++|+.... ..|++|..|.++|||+++| |++||+|++|||+++
T Consensus 7 ~l~~~~~g~G~~~~~-~~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v 55 (83)
T 2kv8_A 7 EVARGRAGYGFTLSG-QAPCVLSCVMRGSPADFVG-LRAGDQILAVNEINV 55 (83)
T ss_dssp EECCCSSCCSCBCCC-SSSCBCCBCCTTSTTTTTT-CCTTCEEEEETTEEC
T ss_pred EEEeCCCcccEEEEc-CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEEC
Confidence 333334456654433 3489999999999999999 999999999999875
No 213
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.63 E-value=3.8e-08 Score=66.93 Aligned_cols=35 Identities=43% Similarity=0.834 Sum_probs=32.8
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|..|.++|||+++|+|++||+|++|||+++
T Consensus 37 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v 71 (105)
T 1wha_A 37 DAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDV 71 (105)
T ss_dssp CCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEEC
Confidence 46999999999999999999999999999999875
No 214
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.63 E-value=5.5e-08 Score=66.40 Aligned_cols=35 Identities=40% Similarity=0.762 Sum_probs=32.9
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|.+|.++|||+++|+|++||+|++|||+++
T Consensus 41 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v 75 (108)
T 1q7x_A 41 HGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSL 75 (108)
T ss_dssp SCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEEC
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEEC
Confidence 46999999999999999999999999999999875
No 215
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.63 E-value=5.6e-08 Score=64.39 Aligned_cols=52 Identities=27% Similarity=0.535 Sum_probs=39.2
Q ss_pred eeEeeeccCCCCcccC---CCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 113 IFLCNIAGGIGNQHIP---GDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 113 v~l~~~~~~~~~~~~~---~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
|+|.+...++|+.... ...+++|..|.++|||+++|.|++||+|++|||+++
T Consensus 9 v~l~k~~~glG~~l~~~~~~~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v 63 (93)
T 2dkr_A 9 VELPKTDEGLGFNIMGGKEQNSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSV 63 (93)
T ss_dssp EEEECCTTCCCEEEECSSSSSCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEEC
T ss_pred EEEEeCCCCccEEEecccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC
Confidence 4443334455554432 246999999999999999944999999999999875
No 216
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.63 E-value=5.5e-08 Score=67.13 Aligned_cols=51 Identities=20% Similarity=0.400 Sum_probs=40.0
Q ss_pred eeEeeecc-CCCCcccCCCCCeEEEEECCCChhhhcCCC-CCCCEEEEECCEeC
Q psy12206 113 IFLCNIAG-GIGNQHIPGDNGIYVTKIMDGGAAQVDGRL-QVGDKLIAVRNSTR 164 (164)
Q Consensus 113 v~l~~~~~-~~~~~~~~~~~gv~I~~v~~gs~A~~~G~L-~~GD~Il~VNg~~v 164 (164)
|.|.+... ++|+.......+++|..|.+++||+++| | ++||+|++|||++|
T Consensus 29 v~l~k~~~~~lG~~i~~~~~gv~V~~V~~~spA~~aG-ll~~GD~I~~vng~~v 81 (113)
T 1va8_A 29 VRIEKARDIPLGATVRNEMDSVIISRIVKGGAAEKSG-LLHEGDEVLEINGIEI 81 (113)
T ss_dssp EEEEECTTCCCCEEEEECSSSEEEEEECTTSHHHHHT-CCCTTCEEEEETTEEC
T ss_pred EEEEeCCCCceeEEEEeCCCCEEEEEeCCCCHHHHcC-CCCCCCEEEEECCEEC
Confidence 34433333 5666544445799999999999999999 7 99999999999875
No 217
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=98.63 E-value=7e-08 Score=65.70 Aligned_cols=33 Identities=27% Similarity=0.469 Sum_probs=30.3
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.+++|..|.++|||+++| |++||+|++|||+++
T Consensus 43 p~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v 75 (107)
T 3qe1_A 43 PLQHVSAVLPGGAADRAG-VRKGDRILEVNGVNV 75 (107)
T ss_dssp CCEEEEEECTTSHHHHHT-CCTTCEEEEETTEEC
T ss_pred CceEEEEECCCCHHHHcC-CCCCCEEEEECCEEC
Confidence 355799999999999999 999999999999875
No 218
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=98.62 E-value=5.3e-08 Score=64.35 Aligned_cols=44 Identities=25% Similarity=0.317 Sum_probs=35.3
Q ss_pred cCCCCcccC-CCCCeEEEEECCCChhhh-cCCCCCCCEEEEECCEeC
Q psy12206 120 GGIGNQHIP-GDNGIYVTKIMDGGAAQV-DGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 120 ~~~~~~~~~-~~~gv~I~~v~~gs~A~~-~G~L~~GD~Il~VNg~~v 164 (164)
.++|+.... ...+++|.+|.++|||++ +| |++||+|++|||+++
T Consensus 13 ~~lG~~i~~~~~~~~~I~~V~~gspA~~~ag-L~~GD~I~~Ing~~v 58 (88)
T 1kwa_A 13 EPMGITLKMNELNHCIVARIMHGGMIHRQGT-LHVGDEIREINGISV 58 (88)
T ss_dssp SCCCEEEECSCGGGEEEEEECTTSHHHHHTC-CCTTCEEEEETTEEG
T ss_pred CceeEEEEeCCCCCEEEEEECCCCHHHHcCC-CCCCCEEEEECCEEC
Confidence 345554433 235799999999999999 66 999999999999875
No 219
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=98.62 E-value=2.3e-08 Score=69.72 Aligned_cols=34 Identities=44% Similarity=0.676 Sum_probs=32.2
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.|++|.+|.++|||+++|+|++||+|++|||+++
T Consensus 53 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v 86 (117)
T 2fne_A 53 LPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSL 86 (117)
T ss_dssp EEEEEEEECTTSHHHHHCCCCTTCEEEEETTEEC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEEC
Confidence 4899999999999999999999999999999875
No 220
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.62 E-value=4.6e-08 Score=67.02 Aligned_cols=35 Identities=34% Similarity=0.770 Sum_probs=32.7
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|..|.++|||+++|+|++||+|++|||+++
T Consensus 35 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v 69 (110)
T 1um1_A 35 APGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSL 69 (110)
T ss_dssp CSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEC
Confidence 46999999999999999999999999999999875
No 221
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.61 E-value=4.9e-08 Score=64.92 Aligned_cols=44 Identities=23% Similarity=0.401 Sum_probs=36.1
Q ss_pred CCCCcccCCCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 121 GIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 121 ~~~~~~~~~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
++|+.......+++|.+|.++|||+++|.|++||+|++|||+++
T Consensus 19 ~lG~~i~~~~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v 62 (91)
T 2e7k_A 19 HLGVTFRVEGGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV 62 (91)
T ss_dssp CCCEEEEESSSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC
T ss_pred cEeEEEEecCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC
Confidence 44444333346999999999999999877999999999999975
No 222
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=98.61 E-value=6.2e-08 Score=64.48 Aligned_cols=44 Identities=32% Similarity=0.505 Sum_probs=36.1
Q ss_pred ccCCCCcccCCCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 119 AGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 119 ~~~~~~~~~~~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..++|+... ...+++|..|.++|||+++| |++||+|++|||+++
T Consensus 18 ~~~~G~~l~-~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v 61 (93)
T 2dls_A 18 QHGFGFTVS-GDRIVLVQSVRPGGAAMKAG-VKEGDRIIKVNGTMV 61 (93)
T ss_dssp SSSCCEEEE-CSSSCEEEEECSSSTTTTTT-CCSSCEEEEETTEEC
T ss_pred CCceeEEEe-CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEEC
Confidence 345555433 23589999999999999999 999999999999875
No 223
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=98.61 E-value=6.1e-08 Score=65.96 Aligned_cols=35 Identities=49% Similarity=0.859 Sum_probs=32.8
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|.+|.++|||+++|+|++||+|++|||+++
T Consensus 37 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v 71 (106)
T 3axa_A 37 KLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSL 71 (106)
T ss_dssp SEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEEC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC
Confidence 45899999999999999999999999999999875
No 224
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=98.61 E-value=4.8e-08 Score=63.67 Aligned_cols=33 Identities=21% Similarity=0.361 Sum_probs=31.2
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.+++|.+|.++|||+++| |++||+|++|||+++
T Consensus 25 ~~v~V~~V~~~spA~~aG-l~~GD~I~~vng~~v 57 (85)
T 1rgw_A 25 MPLTISRITPGSKAAQSQ-LSQGDLVVAIDGVNT 57 (85)
T ss_dssp SCCBEEEECTTSHHHHSS-CCCCSBEEEETTEEC
T ss_pred CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEEC
Confidence 489999999999999999 999999999999875
No 225
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.60 E-value=1.6e-07 Score=68.77 Aligned_cols=72 Identities=21% Similarity=0.292 Sum_probs=55.7
Q ss_pred hhhhhccCceeeEEEeecccCCCCCceEEEEEEEcCC-CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCC
Q psy12206 15 KVIALNVGISKFMYVRRKKVTRQGNMKILDIELVKGN-KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVG 93 (164)
Q Consensus 15 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~v~L~k~~-~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~G 93 (164)
.......+..+.+.+++. + +.+++.|.++. ..|||.+.. + +|..|.++|||+++| |++|
T Consensus 69 ~~~~~~~~~~v~l~vr~~-~------~~~~v~l~~~~~~~lG~~~~~-----------g-~v~~v~~~s~a~~aG-l~~G 128 (166)
T 1w9e_A 69 KVLKQAFGEKITMTIRDR-P------FERTITMHKDSTGHVGFIFKN-----------G-KITSIVKDSSAARNG-LLTE 128 (166)
T ss_dssp HHHHHCCSSEEEEEEECC-T------TCEEEEEECCTTSCCSEEEET-----------T-EEEEECTTSHHHHTT-CCSS
T ss_pred HHHhcCCCCEEEEEEEcC-C------CcEEEEEecCCCCcEeEEEeC-----------C-EEEEEccCCHHHHcC-CCCC
Confidence 333445677899999443 2 33567777544 569998871 3 899999999999999 9999
Q ss_pred CEEEEECCeeccC
Q psy12206 94 DKLIAVRNSTSED 106 (164)
Q Consensus 94 D~Il~VNG~~v~~ 106 (164)
|+|++|||.++.+
T Consensus 129 D~I~~ing~~v~~ 141 (166)
T 1w9e_A 129 HNICEINGQNVIG 141 (166)
T ss_dssp EEEEEETTEECTT
T ss_pred CEEEEECCEECCC
Confidence 9999999999976
No 226
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=98.60 E-value=4.9e-08 Score=66.80 Aligned_cols=32 Identities=34% Similarity=0.514 Sum_probs=30.8
Q ss_pred CeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 132 GIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 132 gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
|++|..|.++|||+++| |++||+|++|||+++
T Consensus 46 gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v 77 (109)
T 1q3o_A 46 LQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNV 77 (109)
T ss_dssp SEEEEEECTTSHHHHTT-CCTTCEEEEETTEEC
T ss_pred CEEEEEECCCCHHHHcC-CCCCCEEEEECCEEC
Confidence 89999999999999999 999999999999875
No 227
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.60 E-value=4.1e-08 Score=66.76 Aligned_cols=51 Identities=29% Similarity=0.478 Sum_probs=40.1
Q ss_pred eeEeeeccCCCCccc--CCCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 113 IFLCNIAGGIGNQHI--PGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 113 v~l~~~~~~~~~~~~--~~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
+.|.+...++|+... ....|++|..|.++|||+++| |++||+|++|||+++
T Consensus 12 v~l~k~~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v 64 (106)
T 2eei_A 12 CYLVKEGGSYGFSLKTVQGKKGVYMTDITPQGVAMRAG-VLADDHLIEVNGENV 64 (106)
T ss_dssp EEEECCSSSCSCCEECCSSCCSCEECCCCTTSHHHHHT-CCSSEEEEEETTEEC
T ss_pred EEEEECCCCCCEEEEeccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEEC
Confidence 444444455666542 234689999999999999999 999999999999875
No 228
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.60 E-value=4.2e-08 Score=66.29 Aligned_cols=51 Identities=24% Similarity=0.374 Sum_probs=39.5
Q ss_pred eeEeeeccCCCCccc--CCCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 113 IFLCNIAGGIGNQHI--PGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 113 v~l~~~~~~~~~~~~--~~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
++|.....++|+... ....|++|..|.++|||+++| |++||+|++|||+++
T Consensus 10 v~l~k~~~g~G~~l~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v 62 (102)
T 2d90_A 10 VVIKKGSNGYGFYLRAGPEQKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSV 62 (102)
T ss_dssp EEEECCSSSSSCEEEECSSSSSEEEECCCTTSTTTTTT-CCTTCEEEEESSCBC
T ss_pred EEEeeCCCCccEEEEeecCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEEC
Confidence 344443445666543 234599999999999999999 999999999999875
No 229
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=98.60 E-value=4.2e-08 Score=66.35 Aligned_cols=35 Identities=26% Similarity=0.583 Sum_probs=32.7
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|.+|.++|||+++|+|++||+|++|||+++
T Consensus 35 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v 69 (97)
T 2ejy_A 35 KQSCTVARILHGGMIHRQGSLHVGDEILEINGTNV 69 (97)
T ss_dssp TCCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEEC
Confidence 35999999999999999999999999999999875
No 230
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=98.60 E-value=3.8e-08 Score=66.89 Aligned_cols=35 Identities=23% Similarity=0.427 Sum_probs=32.2
Q ss_pred CCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 129 GDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 129 ~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
...|++|..|.++|||+++| |++||+|++|||+++
T Consensus 24 ~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v 58 (106)
T 3ngh_A 24 DTDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFV 58 (106)
T ss_dssp TCCSCEEECCCTTSHHHHTT-CCTTCEEEEETTEEC
T ss_pred CCCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEC
Confidence 34589999999999999999 999999999999875
No 231
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.59 E-value=6e-08 Score=66.52 Aligned_cols=44 Identities=36% Similarity=0.690 Sum_probs=36.2
Q ss_pred CCCCcccCC-CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 121 GIGNQHIPG-DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 121 ~~~~~~~~~-~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
++|+..... ..|++|..|.+++||+++|+|++||+|++|||+++
T Consensus 27 ~lG~~l~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v 71 (111)
T 2dlu_A 27 GLGFGIVGGKTSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNV 71 (111)
T ss_dssp CCCEEEECCSSSSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCC
T ss_pred ccCEEEeccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC
Confidence 455444332 25899999999999999999999999999999875
No 232
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=98.59 E-value=7.6e-08 Score=65.92 Aligned_cols=34 Identities=47% Similarity=0.704 Sum_probs=32.3
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.|++|..|.++|||+++|+|++||+|++|||+++
T Consensus 39 ~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v 72 (111)
T 2koj_A 39 APIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDL 72 (111)
T ss_dssp SCEEEEEECSSSHHHHHCSSCTTCEEEEETTEEC
T ss_pred cCEEEEEECCCChHHHCCCCCCCCEEEEECCEEC
Confidence 5899999999999999988999999999999875
No 233
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=98.59 E-value=3.6e-08 Score=65.88 Aligned_cols=33 Identities=30% Similarity=0.514 Sum_probs=31.2
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.|++|..|.++|||+++| |++||+|++|||+++
T Consensus 30 ~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v 62 (96)
T 2v90_A 30 PGQFLWEVDPGLPAKKAG-MQAGDRLVAVAGESV 62 (96)
T ss_dssp EEEEEEEECTTSHHHHTT-CCTTEEEEEETTEEC
T ss_pred CCeEEEEECCCChHHHcC-CCCCCEEEEECCEEC
Confidence 489999999999999999 999999999999875
No 234
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.59 E-value=6.4e-08 Score=63.93 Aligned_cols=34 Identities=29% Similarity=0.603 Sum_probs=31.9
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|..|.++|||+++| |++||+|++|||+++
T Consensus 31 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v 64 (91)
T 1m5z_A 31 EKGVYVKNIRPAGPGDLGG-LKPYDRLLQVNHVRT 64 (91)
T ss_dssp SSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEEC
T ss_pred CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEEC
Confidence 3699999999999999999 999999999999875
No 235
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=98.59 E-value=4.7e-08 Score=64.23 Aligned_cols=47 Identities=19% Similarity=0.300 Sum_probs=36.0
Q ss_pred eeEeeec-cCCCCcccCCCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 113 IFLCNIA-GGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 113 v~l~~~~-~~~~~~~~~~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
++|.+-. +++|+.... | +|.++.+++||+++| |++||+|++|||+++
T Consensus 8 v~l~k~~~g~~Gf~i~~---g-~I~~v~~gspA~~aG-l~~GD~Il~VNG~~v 55 (82)
T 1r6j_A 8 ITMHKDSTGHVGFIFKN---G-KITSIVKDSSAARNG-LLTEHNICEINGQNV 55 (82)
T ss_dssp EEEECCTTSCCCEEEET---T-EEEEECTTSHHHHHT-CCSSEEEEEETTEEC
T ss_pred EEEEECCCCCeEEEEEC---C-EEEEecCCCHHHHcC-CCCCCEEEEECCEEc
Confidence 3443333 356665432 3 489999999999999 999999999999986
No 236
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=98.58 E-value=7.2e-08 Score=66.52 Aligned_cols=50 Identities=20% Similarity=0.239 Sum_probs=38.8
Q ss_pred eeEeeeccCCCCcccCCCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 113 IFLCNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 113 v~l~~~~~~~~~~~~~~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
|.|.+...++|+... ...+++|..|.++|||+++| |++||+|++|||+++
T Consensus 27 v~l~k~~~~~G~~l~-~~~~v~V~~V~~gspA~~AG-L~~GD~Il~VnG~~v 76 (109)
T 2vsv_A 27 IRFTAEEGDLGFTLR-GNAPVQVHFLDPYCSASVAG-AREGDYIVSIQLVDC 76 (109)
T ss_dssp EEECCGGGCCCEEEE-SSSSCEEEEECTTSHHHHTT-CCTTCEEEEETTEEC
T ss_pred EEEEeCCCceeEEEe-CCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEEC
Confidence 444443455555432 34588999999999999999 999999999999875
No 237
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.58 E-value=9.2e-08 Score=64.93 Aligned_cols=33 Identities=33% Similarity=0.605 Sum_probs=31.4
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.|++|..|.+++||+++| |++||+|++|||+++
T Consensus 41 ~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v 73 (104)
T 1wi2_A 41 LGIFISKVIPDSDAHRAG-LQEGDQVLAVNDVDF 73 (104)
T ss_dssp CCCEEEEECTTSHHHHHT-CCTTCEEEEETTEEC
T ss_pred CCEEEEEeCCCChHHHcC-CCCCCEEEEECCEEC
Confidence 589999999999999999 999999999999875
No 238
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=98.58 E-value=9.9e-08 Score=65.73 Aligned_cols=35 Identities=23% Similarity=0.677 Sum_probs=32.7
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|..|.++|||+++|+|++||+|++|||+++
T Consensus 48 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v 82 (112)
T 2r4h_A 48 NMDLYVLRLAEDGPAERSGKMRIGDEILEINGETT 82 (112)
T ss_dssp TCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEEC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEC
Confidence 35899999999999999999999999999999875
No 239
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.58 E-value=1.2e-07 Score=63.06 Aligned_cols=34 Identities=38% Similarity=0.574 Sum_probs=31.5
Q ss_pred CCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 129 GDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 129 ~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
...|++|.+|.++|||++ | |++||+|++|||+++
T Consensus 33 ~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v 66 (95)
T 1mfg_A 33 DDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSF 66 (95)
T ss_dssp TCCCEEEEEECTTSTTTT-T-CCTTCEEEEETTEEC
T ss_pred CCCCEEEEEECCCCchhh-C-CCCCCEEEEECCEEc
Confidence 456999999999999999 8 999999999999875
No 240
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.58 E-value=6.5e-08 Score=67.00 Aligned_cols=34 Identities=35% Similarity=0.619 Sum_probs=31.9
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|..|.+++||+++| |++||+|++|||+++
T Consensus 41 ~~gv~V~~V~~~spA~~aG-L~~GD~Il~vng~~v 74 (117)
T 1uit_A 41 KGGIYVSKVTVGSIAHQAG-LEYGDQLLEFNGINL 74 (117)
T ss_dssp TSCEEEEEECTTSHHHHHT-CCTTCEECEETTEET
T ss_pred CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEEC
Confidence 3599999999999999999 999999999999875
No 241
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=98.58 E-value=6.1e-08 Score=67.28 Aligned_cols=52 Identities=29% Similarity=0.614 Sum_probs=39.3
Q ss_pred eeEeeeccCCCCcccCC--CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 113 IFLCNIAGGIGNQHIPG--DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 113 v~l~~~~~~~~~~~~~~--~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
|.|.....++|+..... ..|++|..|.++|||+++|+|++||+|++|||+++
T Consensus 18 v~l~k~~~glG~~l~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v 71 (119)
T 1tp5_A 18 IVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDL 71 (119)
T ss_dssp EEEECTTSCCCEEEEECGGGCCEEEEEECTTSHHHHHSCCCTTEEEEEETTEEC
T ss_pred EEEEECCCCccEEEecCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC
Confidence 33333334455543322 25999999999999999998999999999999875
No 242
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=98.57 E-value=5.8e-08 Score=72.07 Aligned_cols=35 Identities=43% Similarity=0.748 Sum_probs=32.9
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|..|.++|||+++|+|++||+|++|||++|
T Consensus 110 ~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v 144 (170)
T 3egg_C 110 KLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSL 144 (170)
T ss_dssp SBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEEC
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEEC
Confidence 45899999999999999999999999999999975
No 243
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.57 E-value=1.1e-07 Score=65.00 Aligned_cols=35 Identities=34% Similarity=0.716 Sum_probs=32.5
Q ss_pred CCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 129 GDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 129 ~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
...|++|..|.++|||+++| |++||+|++|||+++
T Consensus 44 ~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v 78 (110)
T 1x5q_A 44 DDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVAL 78 (110)
T ss_dssp TCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEEC
T ss_pred CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEEC
Confidence 34699999999999999999 999999999999875
No 244
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=98.57 E-value=3.8e-08 Score=69.98 Aligned_cols=33 Identities=33% Similarity=0.496 Sum_probs=31.1
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.|++|..|.++|||+++| |++||+|++|||++|
T Consensus 65 ~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v 97 (132)
T 3l4f_D 65 ALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNV 97 (132)
T ss_dssp CSEEEEEECTTSGGGGGT-CCTTCEEEEESSSBC
T ss_pred CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEEC
Confidence 389999999999999999 999999999999875
No 245
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.57 E-value=8.4e-08 Score=64.95 Aligned_cols=35 Identities=31% Similarity=0.553 Sum_probs=32.8
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..+++|..|.+++||+++|+|++||+|++|||+++
T Consensus 37 ~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v 71 (104)
T 2djt_A 37 DTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGEST 71 (104)
T ss_dssp ECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEEC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC
Confidence 46899999999999999998999999999999875
No 246
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.57 E-value=1.4e-07 Score=62.68 Aligned_cols=35 Identities=40% Similarity=0.727 Sum_probs=32.7
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..+++|..|.++|||+++|+|++||+|++|||+++
T Consensus 32 ~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v 66 (97)
T 2iwn_A 32 PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNL 66 (97)
T ss_dssp CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEEC
T ss_pred CCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEEC
Confidence 45999999999999999998999999999999875
No 247
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.56 E-value=6.9e-08 Score=67.65 Aligned_cols=35 Identities=34% Similarity=0.630 Sum_probs=32.6
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|.+|.++|||+++|+|++||+|++|||++|
T Consensus 50 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v 84 (124)
T 2daz_A 50 RMSIFVVGINPEGPAAADGRMRIGDELLEINNQIL 84 (124)
T ss_dssp SCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBC
T ss_pred cCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC
Confidence 35999999999999999999999999999999875
No 248
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=98.56 E-value=6.8e-08 Score=63.87 Aligned_cols=33 Identities=18% Similarity=0.426 Sum_probs=31.2
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.|++|..|.++|||+++| |++||+|++|||+++
T Consensus 27 ~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v 59 (91)
T 2pkt_A 27 QPLAISRVTPGSKAALAN-LCIGDVITAIDGENT 59 (91)
T ss_dssp EEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEC
T ss_pred CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEEC
Confidence 489999999999999999 999999999999875
No 249
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=98.56 E-value=5.9e-08 Score=63.90 Aligned_cols=33 Identities=21% Similarity=0.481 Sum_probs=31.1
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.|++|..|.++|||+++| |++||+|++|||+++
T Consensus 27 ~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v 59 (89)
T 2q3g_A 27 VPLSISRLTPGGKAAQAG-VAVGDWVLSIDGENA 59 (89)
T ss_dssp EEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEG
T ss_pred CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEEC
Confidence 479999999999999999 999999999999875
No 250
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.56 E-value=9.6e-08 Score=64.34 Aligned_cols=33 Identities=39% Similarity=0.648 Sum_probs=31.5
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.|++|..|.++|||+++| |++||+|++|||+++
T Consensus 36 ~gv~V~~V~~~spA~~aG-L~~GD~I~~ing~~v 68 (100)
T 2eeh_A 36 LGIFVSKVEEGSSAERAG-LCVGDKITEVNGLSL 68 (100)
T ss_dssp CCEEEEEECTTSHHHHHT-CCSSCEEEEETTEEC
T ss_pred CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEEC
Confidence 599999999999999999 999999999999875
No 251
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=98.56 E-value=6.7e-08 Score=63.38 Aligned_cols=33 Identities=30% Similarity=0.496 Sum_probs=31.2
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.|++|..|.++|||+++| |++||+|++|||+++
T Consensus 26 ~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v 58 (87)
T 2pa1_A 26 TPIMVTKVAERGKAKDAD-LRPGDIIVAINGESA 58 (87)
T ss_dssp EEEEEEEECSSSHHHHTT-CCTTCEEEEETTEES
T ss_pred CCEEEEEECCCChHHHcC-CCCCCEEEEECCEEC
Confidence 489999999999999999 999999999999875
No 252
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.56 E-value=8.1e-08 Score=66.29 Aligned_cols=45 Identities=33% Similarity=0.607 Sum_probs=36.9
Q ss_pred cCCCCcccCCC----CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 120 GGIGNQHIPGD----NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 120 ~~~~~~~~~~~----~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.++|+...... .+++|..|.++|||+++|+|++||+|++|||++|
T Consensus 28 ~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v 76 (116)
T 2dm8_A 28 SGLGLSIVGGKDTPLNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDL 76 (116)
T ss_dssp SCCCCCCBCCTTSSCSSEECCCCCSSSHHHHHTCCCTTCEEEEETTEEC
T ss_pred CcccEEEeCCCCCCcCCEEEEEECCCChHHhCCCCCCCCEEEEECCEEC
Confidence 35555443322 4999999999999999999999999999999875
No 253
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.56 E-value=7.7e-08 Score=66.11 Aligned_cols=34 Identities=29% Similarity=0.681 Sum_probs=32.0
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.+++|.+|.+++||+++|+|++||+|++|||+++
T Consensus 41 ~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~ 74 (109)
T 1wi4_A 41 PLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESM 74 (109)
T ss_dssp SSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCC
T ss_pred CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEEC
Confidence 4799999999999999999999999999999875
No 254
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.56 E-value=1.8e-07 Score=63.78 Aligned_cols=34 Identities=41% Similarity=0.754 Sum_probs=31.8
Q ss_pred CCCeEEEEECCCChhhhc-CCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVD-GRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~-G~L~~GD~Il~VNg~~v 164 (164)
..|++|..|.++|||+++ | |++||+|++|||+++
T Consensus 40 ~~gv~V~~V~~~spA~~agg-L~~GD~Il~vng~~v 74 (107)
T 1uhp_A 40 SEGIFVSKIVDSGPAAKEGG-LQIHDRIIEVNGRDL 74 (107)
T ss_dssp SCCCEEEEECSSSHHHHTTC-CCSSCEEEEETTEEC
T ss_pred CCCEEEEEeCCCChHHHcCC-CCCCCEEEEECCEEC
Confidence 469999999999999999 7 999999999999875
No 255
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=98.55 E-value=1.1e-07 Score=64.34 Aligned_cols=35 Identities=46% Similarity=0.869 Sum_probs=32.6
Q ss_pred CCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 129 GDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 129 ~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
...|++|..|.++|||+++| |++||+|++|||+++
T Consensus 43 ~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v 77 (104)
T 3sfj_A 43 TDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDM 77 (104)
T ss_dssp TCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEEC
T ss_pred CCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEEC
Confidence 45699999999999999999 999999999999875
No 256
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=98.55 E-value=7.2e-08 Score=64.93 Aligned_cols=33 Identities=27% Similarity=0.620 Sum_probs=31.3
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.|++|..|.++|||+++| |++||+|++|||++|
T Consensus 35 ~g~~V~~V~~~spA~~aG-L~~GD~Il~vng~~v 67 (94)
T 3kzd_A 35 RRLYVNSVKETGLASKKG-LKAGDEILEINNRAA 67 (94)
T ss_dssp CEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEG
T ss_pred CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEEC
Confidence 489999999999999999 999999999999875
No 257
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.55 E-value=1.6e-07 Score=65.70 Aligned_cols=34 Identities=47% Similarity=0.704 Sum_probs=32.3
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.+++|..|.++|||+++|+|++||+|++|||+++
T Consensus 58 ~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v 91 (121)
T 2kom_A 58 APIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDL 91 (121)
T ss_dssp CCEEEEEECTTSHHHHHTCCCSSSEEEEETTEEC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEEc
Confidence 5899999999999999988999999999999875
No 258
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=98.54 E-value=8.5e-08 Score=62.93 Aligned_cols=33 Identities=18% Similarity=0.451 Sum_probs=31.1
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.+++|..|.++|||+++| |++||+|++|||+++
T Consensus 27 ~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v 59 (88)
T 2uzc_A 27 MPLTISSLKDGGKAAQAN-VRIGDVVLSIDGINA 59 (88)
T ss_dssp EEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEC
T ss_pred CCeEEEEECCCChHHHcC-CCCCCEEEEECCEEC
Confidence 479999999999999999 999999999999875
No 259
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.54 E-value=1.2e-07 Score=66.68 Aligned_cols=43 Identities=28% Similarity=0.543 Sum_probs=35.4
Q ss_pred CCCCcccC-CCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 121 GIGNQHIP-GDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 121 ~~~~~~~~-~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
++|+.... ...|++|..|.++|||+++| |++||+|++|||++|
T Consensus 40 ~lG~~l~~~~~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v 83 (124)
T 3tsv_A 40 SVGLRLAGGNDVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDF 83 (124)
T ss_dssp CCCEEEEECTTSCEEEEEECTTCHHHHTT-CCTTEEEEEETTEEC
T ss_pred ceeEEEecCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEEC
Confidence 44443322 33699999999999999999 999999999999875
No 260
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.53 E-value=8.5e-08 Score=64.72 Aligned_cols=44 Identities=25% Similarity=0.351 Sum_probs=36.3
Q ss_pred ccCCCCcccCCCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 119 AGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 119 ~~~~~~~~~~~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..++|+.... ..+++|..|.+++||+++| |++||+|++|||+++
T Consensus 25 ~~g~G~~~~~-~~~~~V~~V~~~spA~~aG-L~~GD~I~~vng~~v 68 (100)
T 1whd_A 25 KDGFGFTICC-DSPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPV 68 (100)
T ss_dssp SSSSSCBCCC-SSSCBCCBCCTTSHHHHHT-CCSSCEEEEETTEEC
T ss_pred CCeeeEEEeC-CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEEC
Confidence 3455654433 3689999999999999999 999999999999875
No 261
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.52 E-value=8.1e-08 Score=64.75 Aligned_cols=34 Identities=35% Similarity=0.677 Sum_probs=31.8
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|..|.+++||+++| |++||+|++|||+++
T Consensus 34 ~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v 67 (101)
T 1uez_A 34 GVGIYVSLVEPGSLAEKEG-LRVGDQILRVNDKSL 67 (101)
T ss_dssp TCCEEEEEECTTSHHHHHT-CCSSCCEEEETTEEC
T ss_pred CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEEC
Confidence 3589999999999999999 999999999999875
No 262
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.52 E-value=1.6e-07 Score=65.06 Aligned_cols=35 Identities=23% Similarity=0.497 Sum_probs=32.6
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|..|.++|||+++|+|++||+|++|||+++
T Consensus 49 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v 83 (117)
T 2ehr_A 49 LKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDL 83 (117)
T ss_dssp CCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBC
T ss_pred cCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEEC
Confidence 35999999999999999998999999999999875
No 263
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.52 E-value=8.9e-08 Score=63.78 Aligned_cols=34 Identities=18% Similarity=0.361 Sum_probs=31.6
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..+++|..|.+++||+++| |++||+|++|||+++
T Consensus 31 ~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v 64 (94)
T 2eeg_A 31 SAPLTISRVHAGSKAALAA-LCPGDLIQAINGEST 64 (94)
T ss_dssp TSCCEECCCCSSSHHHHTT-CCTTCEEEEETTEET
T ss_pred CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEEC
Confidence 3589999999999999999 999999999999875
No 264
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.52 E-value=2e-07 Score=65.24 Aligned_cols=35 Identities=23% Similarity=0.480 Sum_probs=32.6
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|..|.+++||+++|+|++||+|++|||+++
T Consensus 43 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v 77 (123)
T 1ueq_A 43 DEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCV 77 (123)
T ss_dssp SCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEEC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEEC
Confidence 45799999999999999999999999999999875
No 265
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=98.51 E-value=1.9e-07 Score=65.38 Aligned_cols=34 Identities=24% Similarity=0.553 Sum_probs=32.2
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.+++|.+|.++|||+++|+|++||+|++|||+++
T Consensus 45 ~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v 78 (125)
T 3hpk_A 45 PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSI 78 (125)
T ss_dssp SSEEEEEECTTSHHHHHCCCCTTCEEEEETTEEC
T ss_pred CCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEEC
Confidence 5899999999999999999999999999999875
No 266
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.51 E-value=9e-08 Score=65.15 Aligned_cols=33 Identities=30% Similarity=0.403 Sum_probs=30.8
Q ss_pred CeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 132 GIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 132 gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.++|..|.+++||+++|+|++||+|++|||+++
T Consensus 33 ~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v 65 (103)
T 1ufx_A 33 LPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTL 65 (103)
T ss_dssp SCEEEEECTTSHHHHHCSSCTTCBCCEETTEEC
T ss_pred cEEEEEeCCCChHHHCCCCCCCCEEEEECCEEC
Confidence 359999999999999999999999999999875
No 267
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=98.50 E-value=1.2e-07 Score=63.41 Aligned_cols=33 Identities=24% Similarity=0.422 Sum_probs=31.2
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.+++|..|.++|||+++| |++||+|++|||+++
T Consensus 37 ~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v 69 (96)
T 2ego_A 37 MVTFVARVHESSPAQLAG-LTPGDTIASVNGLNV 69 (96)
T ss_dssp EEEEEEEECTTCHHHHTT-CCTTCEEEEETTEEC
T ss_pred CCeEEEEECCCChHHHcC-CCCCCEEEEECCEEC
Confidence 488999999999999999 999999999999875
No 268
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.50 E-value=3.9e-08 Score=69.65 Aligned_cols=49 Identities=31% Similarity=0.380 Sum_probs=39.2
Q ss_pred eeeccCCCCcccCCCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 116 CNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 116 ~~~~~~~~~~~~~~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.....++|+.......+++|..|.++|||+++|+|++||+|++|||++|
T Consensus 34 ~k~~~glG~~i~~~~~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v 82 (126)
T 1wif_A 34 TVGNLGLGLVVIQNGPYLQISHLINKGAAASDGILQPGDVLISVGHANV 82 (126)
T ss_dssp ECCTTCCCCCEEEETTEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCC
T ss_pred ecCCceEeEEEEcCCCcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEc
Confidence 3334456654444456789999999999999999999999999999875
No 269
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=98.50 E-value=1.4e-07 Score=63.73 Aligned_cols=34 Identities=24% Similarity=0.599 Sum_probs=30.9
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.|++|.+|.++|||+++|+|++||+|++|||+++
T Consensus 39 ~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v 72 (103)
T 2fcf_A 39 RGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDL 72 (103)
T ss_dssp --EEEEEECSSSHHHHHCCCCTTCEEEEETTEEC
T ss_pred CCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEEC
Confidence 5899999999999999999999999999999875
No 270
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.50 E-value=5.8e-08 Score=65.51 Aligned_cols=45 Identities=29% Similarity=0.599 Sum_probs=36.6
Q ss_pred cCCCCcccCC---CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 120 GGIGNQHIPG---DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 120 ~~~~~~~~~~---~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.++|+..... ..+++|..|.++|||+++|+|++||+|++|||+++
T Consensus 22 ~g~G~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v 69 (103)
T 1wfv_A 22 KGFGFSIRGGREYKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGEST 69 (103)
T ss_dssp TSSSBCCEEETTTTEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEEC
T ss_pred CcCCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEC
Confidence 3555544322 23899999999999999998999999999999875
No 271
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=98.50 E-value=1.8e-07 Score=65.64 Aligned_cols=34 Identities=24% Similarity=0.599 Sum_probs=32.4
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.|++|..|.++|||+++|+|++||+|++|||+++
T Consensus 59 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v 92 (123)
T 2iwq_A 59 RGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDL 92 (123)
T ss_dssp CSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEEC
Confidence 5899999999999999999999999999999875
No 272
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=98.49 E-value=1.1e-07 Score=62.31 Aligned_cols=33 Identities=33% Similarity=0.514 Sum_probs=30.5
Q ss_pred CCeEEEEECCCChhhh-cCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQV-DGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~-~G~L~~GD~Il~VNg~~v 164 (164)
.+++|.+|.++|||++ +| |++||+|++|||+++
T Consensus 28 ~~~~V~~V~~gspA~~~ag-l~~GD~I~~vng~~v 61 (87)
T 4e34_A 28 VPILISEIHPGQPADRCGG-LHVGDAILAVNGVNL 61 (87)
T ss_dssp EEEEEEEECTTSHHHHHSC-CCTTEEEEEETTEEC
T ss_pred CCEEEEEECCCCHHHhcCC-CCCCCEEEEECCEEC
Confidence 4789999999999999 58 999999999999875
No 273
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=98.49 E-value=1.2e-07 Score=67.17 Aligned_cols=35 Identities=23% Similarity=0.369 Sum_probs=32.7
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|+||..|.+++||+++|+|++||+|++|||+++
T Consensus 64 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v 98 (131)
T 1wfg_A 64 RLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLL 98 (131)
T ss_dssp CEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEEC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEC
Confidence 34899999999999999999999999999999975
No 274
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=98.49 E-value=1.1e-07 Score=62.67 Aligned_cols=33 Identities=33% Similarity=0.461 Sum_probs=31.0
Q ss_pred CCeEEEEECCCChhhhc-CCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVD-GRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~-G~L~~GD~Il~VNg~~v 164 (164)
.|++|.+|.++|||+++ | |++||+|++|||+++
T Consensus 30 ~g~~V~~V~~~spA~~agg-l~~GD~I~~ing~~v 63 (90)
T 1qav_A 30 MPILISKIFKGLAADQTEA-LFVGDAILSVNGEDL 63 (90)
T ss_dssp EEEEEEEECTTSHHHHTTC-CCTTEEEEEETTEEC
T ss_pred CCEEEEEECCCCHHHhcCC-CCCCCEEEEECCEEC
Confidence 58999999999999999 7 999999999999875
No 275
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.49 E-value=2.1e-07 Score=65.32 Aligned_cols=50 Identities=16% Similarity=0.297 Sum_probs=38.1
Q ss_pred eEeeeccCCCCcccC--CCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 114 FLCNIAGGIGNQHIP--GDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 114 ~l~~~~~~~~~~~~~--~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.+.....++|+.... ...|++|..|.++|||+++| |++||+|++|||+++
T Consensus 14 ~l~~~~~g~G~~l~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v 65 (128)
T 2kjd_A 14 TMKKGPSGYGFNLHSDKSKPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCM 65 (128)
T ss_dssp EEECCSSSCCEEEEECSSSCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEEC
T ss_pred EEecCCCcccEEEEecCCCCCEEEEEeCCCChHHHcC-CCCCCEEEEECCEEC
Confidence 333333455554322 23599999999999999999 999999999999875
No 276
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=98.48 E-value=1.3e-07 Score=63.43 Aligned_cols=32 Identities=28% Similarity=0.393 Sum_probs=30.3
Q ss_pred CeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 132 GIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 132 gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
|++|..|.++|||+++| |++||+|++|||+++
T Consensus 35 g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v 66 (99)
T 3khf_A 35 HHVVWSVEDGSPAQEAG-LRAGDLITHINGESV 66 (99)
T ss_dssp EEEEEEECTTSHHHHHT-CCTTCEEEEETTEEC
T ss_pred CeEEEEECCCCHHHHcC-CCCCCEEEEECCEEC
Confidence 66899999999999999 999999999999875
No 277
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=98.48 E-value=1.4e-07 Score=63.10 Aligned_cols=34 Identities=29% Similarity=0.664 Sum_probs=32.1
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.|++|..|.++|||+++|+|++||+|++|||+++
T Consensus 37 ~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v 70 (98)
T 1ihj_A 37 TGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDV 70 (98)
T ss_dssp EEEEEEEECTTSHHHHHCSCCTTCEEEEETTEEC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC
Confidence 4899999999999999998999999999999875
No 278
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.48 E-value=8.7e-08 Score=65.75 Aligned_cols=35 Identities=43% Similarity=0.746 Sum_probs=32.7
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|..|.++|||+++|+|++||+|++|||+++
T Consensus 43 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v 77 (111)
T 1uju_A 43 DEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSL 77 (111)
T ss_dssp CCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC
Confidence 46899999999999999999999999999999875
No 279
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.47 E-value=1.2e-07 Score=64.93 Aligned_cols=52 Identities=33% Similarity=0.641 Sum_probs=40.2
Q ss_pred eeEeeeccCCCCcccCC--CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 113 IFLCNIAGGIGNQHIPG--DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 113 v~l~~~~~~~~~~~~~~--~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
|+|.....++|+..... ..+++|..|.+++||+++|+|++||+|++|||+++
T Consensus 19 v~l~k~~~glG~~l~~~~~~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v 72 (113)
T 1um7_A 19 IILHKGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSGELRRGDRILSVNGVNL 72 (113)
T ss_dssp EEEECCSSCSSBCCBCCSTTCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBC
T ss_pred EEEEECCCcccEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC
Confidence 34433344566655433 36899999999999999988999999999999875
No 280
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.47 E-value=6.2e-08 Score=68.58 Aligned_cols=35 Identities=20% Similarity=0.474 Sum_probs=31.4
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..+++|..|.+++||+++|.|++||+|++|||+++
T Consensus 56 ~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v 90 (130)
T 1i16_A 56 DKPLTINRIFKGAASEQSETVQPGDEILQLGGTAM 90 (130)
T ss_dssp CCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBG
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC
Confidence 45899999999999999944999999999999874
No 281
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.47 E-value=1.6e-07 Score=66.10 Aligned_cols=35 Identities=40% Similarity=0.677 Sum_probs=32.7
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|..|.++|||+++|+|++||+|++|||+++
T Consensus 45 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v 79 (129)
T 2dmz_A 45 ASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNI 79 (129)
T ss_dssp CCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEEC
Confidence 46899999999999999999999999999999875
No 282
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=98.47 E-value=1.4e-07 Score=66.65 Aligned_cols=34 Identities=21% Similarity=0.506 Sum_probs=32.0
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.+++|.+|.++|||+++|+|++||+|++|||++|
T Consensus 43 ~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v 76 (129)
T 2kpk_A 43 EFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCV 76 (129)
T ss_dssp EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEEC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEEC
Confidence 4699999999999999999999999999999875
No 283
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=98.46 E-value=1.7e-07 Score=63.69 Aligned_cols=34 Identities=21% Similarity=0.369 Sum_probs=31.7
Q ss_pred CCeEEEEECCCChhhhcC-CCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDG-RLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G-~L~~GD~Il~VNg~~v 164 (164)
.+++|..|.++|||+++| +|++||+|++|||+++
T Consensus 43 ~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v 77 (107)
T 3nfk_A 43 MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDI 77 (107)
T ss_dssp EEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEEC
T ss_pred CCeEEEEECCCCchHHcCCccCCCCEEEEECCEEC
Confidence 479999999999999999 5999999999999875
No 284
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=98.46 E-value=2.3e-07 Score=66.49 Aligned_cols=34 Identities=47% Similarity=0.905 Sum_probs=32.1
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|.+|.++|||+++| |++||+|++|||+++
T Consensus 63 ~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v 96 (139)
T 2vz5_A 63 DKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDM 96 (139)
T ss_dssp CCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEEC
T ss_pred CCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEEc
Confidence 4699999999999999999 999999999999875
No 285
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=98.46 E-value=9.9e-08 Score=65.83 Aligned_cols=34 Identities=24% Similarity=0.438 Sum_probs=31.8
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|..|.++|||+++| |++||+|++|||+++
T Consensus 37 ~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v 70 (114)
T 2edz_A 37 TDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFV 70 (114)
T ss_dssp CCSCEEECCCTTCTTGGGT-CCTTCEEEEESSSBC
T ss_pred CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEEC
Confidence 4689999999999999999 999999999999875
No 286
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.44 E-value=1.1e-07 Score=65.97 Aligned_cols=34 Identities=21% Similarity=0.473 Sum_probs=32.3
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.|++|..|.+++||+++|+|++||+|++|||++|
T Consensus 42 ~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v 75 (119)
T 1x6d_A 42 KVITVHRVFPNGLASQEGTIQKGNEVLSINGKSL 75 (119)
T ss_dssp SSCEEEEECSSSHHHHHTSSCTTCBCCEETTEEC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEEC
Confidence 5899999999999999999999999999999875
No 287
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.44 E-value=9.2e-08 Score=67.25 Aligned_cols=34 Identities=32% Similarity=0.590 Sum_probs=31.8
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..+++|..|.+++||+++| |++||+|++|||++|
T Consensus 60 ~~gv~V~~V~~~spA~~aG-L~~GD~I~~ing~~v 93 (126)
T 2yuy_A 60 MDTIFVKQVKEGGPAFEAG-LCTGDRIIKVNGESV 93 (126)
T ss_dssp CCCCCBCCCCSSSHHHHHT-CCSSCCCCEETTEEC
T ss_pred CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEEC
Confidence 3579999999999999999 999999999999875
No 288
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.43 E-value=2.3e-07 Score=59.50 Aligned_cols=34 Identities=26% Similarity=0.495 Sum_probs=31.8
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.|++|.+|.++|||+++|+|++||+|++|||+++
T Consensus 21 ~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v 54 (81)
T 2rcz_A 21 SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVT 54 (81)
T ss_dssp EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEEC
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEEC
Confidence 4899999999999999988999999999999875
No 289
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.43 E-value=2.6e-07 Score=60.91 Aligned_cols=34 Identities=26% Similarity=0.495 Sum_probs=32.0
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.|++|.+|.++|||+++|+|++||+|++|||+++
T Consensus 23 ~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v 56 (92)
T 3cyy_A 23 SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVT 56 (92)
T ss_dssp EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEEC
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEEC
Confidence 4889999999999999988999999999999875
No 290
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.43 E-value=2.4e-07 Score=61.55 Aligned_cols=30 Identities=27% Similarity=0.630 Sum_probs=29.0
Q ss_pred EEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 134 YVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 134 ~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
+|.+|.++|||+++| |++||+|++|||+++
T Consensus 34 ~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v 63 (90)
T 1y7n_A 34 IICSLMRGGIAERGG-VRVGHRIIEINGQSV 63 (90)
T ss_dssp EEEEECTTSHHHHHT-CCSSCEEEEETTEEC
T ss_pred EEEEECCCCHHHHcC-CCCCCEEEEECCEEC
Confidence 899999999999999 999999999999985
No 291
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=98.42 E-value=2.1e-07 Score=64.97 Aligned_cols=34 Identities=21% Similarity=0.487 Sum_probs=31.0
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.|++|..|.++|||+++|.|++||+|++|||+++
T Consensus 53 ~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v 86 (120)
T 2iwo_A 53 VPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTST 86 (120)
T ss_dssp EEEEEEEECTTSHHHHHTCCCTTCEEEEETTEEC
T ss_pred CCEEEEEECCCCHHHHhCCCCCCCEEEEECCEEC
Confidence 4899999999999999933999999999999875
No 292
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.42 E-value=1.1e-07 Score=64.44 Aligned_cols=33 Identities=18% Similarity=0.447 Sum_probs=30.9
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.+++|.+|.++|||+++| |++||+|++|||+++
T Consensus 29 ~~v~V~~V~~~spA~~aG-L~~GD~I~~ing~~v 61 (103)
T 1wf7_A 29 MPLTISSLKDGGKASQAH-VRIGDVVLSIDGISA 61 (103)
T ss_dssp EEEEECCCCTTCHHHHTT-CCTTCBEEEETTEEC
T ss_pred CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEEC
Confidence 368999999999999999 999999999999875
No 293
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.42 E-value=1.6e-07 Score=65.16 Aligned_cols=33 Identities=18% Similarity=0.400 Sum_probs=31.4
Q ss_pred CeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 132 GIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 132 gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
+++|..|.+++||+++|+|++||+|++|||+++
T Consensus 43 ~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v 75 (117)
T 1v62_A 43 VITIDRIKPASVVDRSGALHPGDHILSIDGTSM 75 (117)
T ss_dssp EEEEEECCTTSHHHHHTCCCTTCBEEEETTEET
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC
Confidence 499999999999999999999999999999975
No 294
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=98.42 E-value=1.2e-07 Score=65.49 Aligned_cols=35 Identities=34% Similarity=0.662 Sum_probs=32.7
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|.+|.++|||+++|+|++||+|++|||+++
T Consensus 48 ~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v 82 (117)
T 2o2t_A 48 ELGIFVQEIQEGSVAHRDGRLKETDQILAINGQAL 82 (117)
T ss_dssp CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEEC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEEC
Confidence 35899999999999999999999999999999875
No 295
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=98.41 E-value=2.4e-07 Score=65.28 Aligned_cols=34 Identities=32% Similarity=0.634 Sum_probs=31.9
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.|++|..|.++|||+++|.|++||+|++|||++|
T Consensus 65 ~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v 98 (128)
T 1nf3_C 65 PGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEV 98 (128)
T ss_dssp EEEEEEEECTTCHHHHHTCCCTTCEEEEETTEES
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEEC
Confidence 4899999999999999998899999999999975
No 296
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=98.41 E-value=9.7e-08 Score=67.36 Aligned_cols=34 Identities=50% Similarity=0.797 Sum_probs=32.2
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.+++|.+|.++|||+++|+|++||+|++|||+++
T Consensus 55 ~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v 88 (127)
T 1wg6_A 55 LGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETL 88 (127)
T ss_dssp EEEEEEECCSSSSTHHHHTSCSCCBEEEETTEES
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEEC
Confidence 4899999999999999999999999999999875
No 297
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.41 E-value=3.2e-07 Score=60.17 Aligned_cols=47 Identities=23% Similarity=0.341 Sum_probs=33.6
Q ss_pred EeeeccCCCCcccC--CCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 115 LCNIAGGIGNQHIP--GDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 115 l~~~~~~~~~~~~~--~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
|.+...++|+.... ...+++|..+ ++|||+ +| |++||+|++|||+++
T Consensus 9 l~k~~~g~G~~~~~~~~~~~~~v~~v-~~spA~-aG-l~~GD~I~~vng~~v 57 (88)
T 3bpu_A 9 IVKGPMGFGFTIADSPGGGGQRVKQI-VDSPRS-RG-LKEGDLIVEVNKKNV 57 (88)
T ss_dssp EECBTTBSSCEEEECTTSSSEEEEEC-CC--CC-TT-CCTTCEEEEETTEEC
T ss_pred EEcCCCceeEEEEecCCCCcEEEEEe-cCChhH-hC-CCCCCEEEEECCEEc
Confidence 33334566665432 2358889887 999999 88 999999999999875
No 298
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=98.41 E-value=2e-07 Score=63.04 Aligned_cols=34 Identities=38% Similarity=0.574 Sum_probs=31.5
Q ss_pred CCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 129 GDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 129 ~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
...|++|.+|.++|||++ | |++||+|++|||+++
T Consensus 41 ~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v 74 (103)
T 1n7t_A 41 DDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSF 74 (103)
T ss_dssp SCCSEECCCBSSSSTTSS-S-CCTTCEEEEETTEEC
T ss_pred CCCCEEEEEECCCCchHH-C-CCCCCEEEEECCEEC
Confidence 456999999999999999 8 999999999999875
No 299
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=98.41 E-value=3.6e-07 Score=63.26 Aligned_cols=34 Identities=24% Similarity=0.553 Sum_probs=32.0
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.+++|..|.++|||+++|+|++||+|++|||+++
T Consensus 50 ~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v 83 (114)
T 2gzv_A 50 PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSI 83 (114)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEEC
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEEC
Confidence 4799999999999999999999999999999875
No 300
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.40 E-value=3.6e-07 Score=64.01 Aligned_cols=34 Identities=32% Similarity=0.600 Sum_probs=32.2
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.|++|..|.+++||+++|+|++||+|++|||++|
T Consensus 48 ~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v 81 (124)
T 1wh1_A 48 IGIYISEIDPNSIAAKDGRIREGDRIIQINGIEV 81 (124)
T ss_dssp CCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC
Confidence 6999999999999999988999999999999875
No 301
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=98.39 E-value=2.4e-07 Score=62.87 Aligned_cols=33 Identities=33% Similarity=0.481 Sum_probs=30.7
Q ss_pred CCeEEEEECCCChhhhc-CCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVD-GRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~-G~L~~GD~Il~VNg~~v 164 (164)
.+++|..|.++|||+++ | |++||+|++|||+++
T Consensus 35 ~~~~V~~V~~~s~A~~a~g-L~~GD~Il~Ing~~v 68 (103)
T 2dc2_A 35 VPILISEIHPGQPADRCGG-LHVGDAILAVNGVNL 68 (103)
T ss_dssp EEEEEEEECTTSHHHHHTC-CCSSEEEEEETTEES
T ss_pred CCEEEEEECCCCHHHHhCC-CCCCCEEEEECCEEC
Confidence 48899999999999996 7 999999999999985
No 302
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=98.38 E-value=3.6e-07 Score=62.58 Aligned_cols=43 Identities=30% Similarity=0.547 Sum_probs=35.1
Q ss_pred CCCCcccC--CCCCeEEEEECCCChhhhcCCC-CCCCEEEEECCEeC
Q psy12206 121 GIGNQHIP--GDNGIYVTKIMDGGAAQVDGRL-QVGDKLIAVRNSTR 164 (164)
Q Consensus 121 ~~~~~~~~--~~~gv~I~~v~~gs~A~~~G~L-~~GD~Il~VNg~~v 164 (164)
++|+.... ...+++|.+|.++|||+++| | ++||+|++|||+++
T Consensus 14 glG~~~~~~~~~~~~~V~~v~~~spA~~aG-ll~~GD~I~~ing~~v 59 (112)
T 1qau_A 14 GLGFLVKERVSKPPVIISDLIRGGAAEQSG-LIQAGDIILAVNDRPL 59 (112)
T ss_dssp BTSEEEEECSSSSCEEEEEECTTSHHHHHT-CCCTTCEEEEETTEEC
T ss_pred ceeEEEEecCCCCCEEEEEeCCCChHHHcC-CCCCCCEEEEECCEEC
Confidence 45544322 23589999999999999999 7 99999999999875
No 303
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.38 E-value=1.2e-07 Score=63.08 Aligned_cols=33 Identities=30% Similarity=0.524 Sum_probs=31.2
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.|++|..|.++|||+++| |++||+|++|||+++
T Consensus 30 ~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v 62 (94)
T 1vb7_A 30 TPIIVTKVTERGKAEAAD-LRPGDIIVAINGQSA 62 (94)
T ss_dssp EEEECCCBCTTSSHHHHT-CCTTCEEEEETTEEC
T ss_pred CCeEEEEECCCCHHHHCC-CCCCCEEEEECCEEC
Confidence 488999999999999999 999999999999875
No 304
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=98.38 E-value=4.4e-07 Score=61.66 Aligned_cols=33 Identities=24% Similarity=0.511 Sum_probs=30.7
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|.+|.++|||+ +| |++||+|++|||+++
T Consensus 38 ~~gv~V~~V~~~spA~-ag-l~~GD~I~~vng~~v 70 (107)
T 2h2b_A 38 ETSIVISDVLKGGPAE-GQ-LQENDRVAMVNGVSM 70 (107)
T ss_dssp CCCEEEEEECTTSTTB-TT-BCTTCEEEEETTEEC
T ss_pred CCCEEEEEECCCCchh-hC-CCCCCEEEEECCEEC
Confidence 4599999999999999 88 999999999999875
No 305
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.38 E-value=3.8e-07 Score=64.12 Aligned_cols=33 Identities=36% Similarity=0.644 Sum_probs=31.3
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.|++|..|.++|||+++| |++||+|++|||+++
T Consensus 46 ~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v 78 (128)
T 1uf1_A 46 LGIYITGVDPGSEAEGSG-LKVGDQILEVNGRSF 78 (128)
T ss_dssp CCCEEEEECTTCHHHHHT-CCTTCEEEEETTEEC
T ss_pred CCEEEEEECCCCHHHHCC-CCCCCEEEEECCEEC
Confidence 489999999999999999 999999999999875
No 306
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=98.38 E-value=3.8e-07 Score=61.56 Aligned_cols=33 Identities=27% Similarity=0.620 Sum_probs=30.1
Q ss_pred CeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 132 GIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 132 gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
+++|.+|.+++||+++|.|++||+|++|||+++
T Consensus 38 ~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v 70 (101)
T 2yt7_A 38 TAVIANLLHGGPAERSGALSIGDRLTAINGTSL 70 (101)
T ss_dssp CEEEEEECTTSTTGGGSSCCTTCEEEEESSCBC
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC
Confidence 799999999999999544999999999999875
No 307
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=98.38 E-value=1.4e-07 Score=66.33 Aligned_cols=34 Identities=26% Similarity=0.505 Sum_probs=32.1
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.|++|..|.+++||+++|+|++||+|++|||++|
T Consensus 54 ~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v 87 (128)
T 2db5_A 54 VDIFVKDVQPGSVADRDQRLKENDQILAINHTPL 87 (128)
T ss_dssp EEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC
Confidence 4899999999999999999999999999999875
No 308
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.35 E-value=2.1e-07 Score=62.75 Aligned_cols=33 Identities=30% Similarity=0.586 Sum_probs=30.8
Q ss_pred CCeEEEEECCCChhhhc-CCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVD-GRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~-G~L~~GD~Il~VNg~~v 164 (164)
.+++|.+|.++|||+++ | |++||+|++|||+++
T Consensus 35 ~~v~V~~V~~~spA~~agG-L~~GD~I~~ing~~v 68 (100)
T 2edp_A 35 EPLTVSKIEDGGKAALSQK-MRTGDELVNINGTPL 68 (100)
T ss_dssp EEEEECCCCTTSHHHHHTS-CCTTCEEEEETTEEC
T ss_pred CCeEEEEECCCCHHHHcCC-CCCCCEEEEECCEEc
Confidence 47899999999999999 7 999999999999875
No 309
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.35 E-value=4.7e-07 Score=62.96 Aligned_cols=34 Identities=26% Similarity=0.542 Sum_probs=30.4
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..++|.+|.++|||+++|.|++||+|++|||+++
T Consensus 43 ~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v 76 (118)
T 1v6b_A 43 GKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIV 76 (118)
T ss_dssp CSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC
Confidence 3599999999999999933999999999999875
No 310
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.35 E-value=3.4e-07 Score=62.05 Aligned_cols=34 Identities=26% Similarity=0.396 Sum_probs=31.8
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..+++|..|.+++||+++| |++||+|++|||+++
T Consensus 47 ~~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v 80 (104)
T 2z17_A 47 EMFTLICKIQEDSPAHCAG-LQAGDVLANINGVST 80 (104)
T ss_dssp SCCEEEEEECTTSHHHHHT-CCTTCBCCEETTEEC
T ss_pred CCCeEEEEECCCChHHHcC-CCCCCEEEEECCEEc
Confidence 3599999999999999999 999999999999875
No 311
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.34 E-value=5.5e-07 Score=62.86 Aligned_cols=35 Identities=23% Similarity=0.364 Sum_probs=32.4
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..+++|..|.+++||+++|.|++||+|++|||+++
T Consensus 44 ~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v 78 (122)
T 1v5q_A 44 SSPPLISYIEADSPAERCGVLQIGDRVMAINGIPT 78 (122)
T ss_dssp SSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEES
T ss_pred CCCcEEEEECCCChHHHcCCCCCCCEEEEECCEEC
Confidence 35789999999999999998999999999999875
No 312
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.34 E-value=7.4e-07 Score=61.14 Aligned_cols=34 Identities=26% Similarity=0.555 Sum_probs=31.9
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|..|.++|||+++| |++||+|++|||+++
T Consensus 34 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v 67 (113)
T 2pzd_A 34 QHGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMV 67 (113)
T ss_dssp SSCEEEEEEBTTSHHHHHT-CCTTCEEEEETTEEC
T ss_pred CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEEC
Confidence 4699999999999999999 999999999999875
No 313
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.34 E-value=2.6e-07 Score=63.75 Aligned_cols=50 Identities=18% Similarity=0.282 Sum_probs=38.1
Q ss_pred eeEeeeccCCCCcccCCCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 113 IFLCNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 113 v~l~~~~~~~~~~~~~~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
|.|.....++|+... ...+++|..|.+++||+++| |++||+|++|||++|
T Consensus 19 v~l~~~~~~~G~~l~-~~~~v~V~~V~~~spA~~aG-L~~GD~Il~InG~~v 68 (111)
T 1vae_A 19 IHFTVEEGDLGFTLR-GNTPVQVHFLDPHCSASLAG-AKEGDYIVSIQGVDC 68 (111)
T ss_dssp CCEECCSSCCSCCEE-SSSSCEECCCCTTSSHHHHH-CCTTCEEEEETTEEC
T ss_pred EEEEcCCCcccEEEe-CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEEC
Confidence 444333345555332 23588999999999999999 999999999999875
No 314
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.34 E-value=2.8e-07 Score=63.90 Aligned_cols=33 Identities=18% Similarity=0.356 Sum_probs=30.7
Q ss_pred CCeEEEEECCCChhhhc--CCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVD--GRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~--G~L~~GD~Il~VNg~~v 164 (164)
.|++|..|.++|||+++ | |++||+|++|||++|
T Consensus 41 ~~v~V~~V~~~spA~~a~gG-L~~GD~Il~ing~~v 75 (119)
T 2cs5_A 41 MPVIVSRVAPGTPADLCVPR-LNEGDQVVLINGRDI 75 (119)
T ss_dssp EEEEEEEECSSSTTTSSSSC-CCTTCEEEEETTBCT
T ss_pred CCeEEEEECCCCHHHHhhcC-CCCCCEEEEECCEEC
Confidence 37999999999999999 7 999999999999875
No 315
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.34 E-value=1.8e-07 Score=65.03 Aligned_cols=33 Identities=27% Similarity=0.620 Sum_probs=31.0
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.+++|..|.++|||+++| |++||+|++|||+++
T Consensus 44 ~gv~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v 76 (114)
T 2d8i_A 44 RRLYVNSVKETGLASKKG-LKAGDEILEINNRAA 76 (114)
T ss_dssp EEEEEEECCTTSSHHHHT-CCTTCCEEEESSCBG
T ss_pred CCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEC
Confidence 479999999999999999 999999999999874
No 316
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.34 E-value=1.4e-07 Score=63.95 Aligned_cols=33 Identities=24% Similarity=0.378 Sum_probs=31.0
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.+++|..|.++|||+++| |++||+|++|||+++
T Consensus 29 ~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v 61 (103)
T 1v5l_A 29 QPLVITRITPGSKAAAAN-LCPGDVILAIDGFGT 61 (103)
T ss_dssp EEEECSCBCTTSTTGGGT-CCTTCBEEEETTEEC
T ss_pred CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEEC
Confidence 378999999999999999 999999999999875
No 317
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.32 E-value=6.4e-07 Score=61.57 Aligned_cols=33 Identities=24% Similarity=0.575 Sum_probs=31.4
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.|++|..|.+++||+++| |++||+|++|||+++
T Consensus 41 ~gv~V~~V~~~s~A~~aG-L~~GD~Il~vng~~v 73 (114)
T 1x5n_A 41 PGIFISHVKPGSLSAEVG-LEIGDQIVEVNGVDF 73 (114)
T ss_dssp CSEEEEEECTTSTTTTTT-CCTTCEEEEETTEET
T ss_pred CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEEC
Confidence 589999999999999999 999999999999875
No 318
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.32 E-value=5.6e-07 Score=62.25 Aligned_cols=33 Identities=24% Similarity=0.507 Sum_probs=30.2
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|.+|.+++||+ +| |++||+|++|||+++
T Consensus 45 ~~gv~V~~V~~~spA~-~g-L~~GD~I~~Vng~~v 77 (117)
T 2csj_A 45 ETSIVISDVLPGGPAD-GL-LQENDRVVMVNGTPM 77 (117)
T ss_dssp CCBCEEEEECTTSSHH-HH-BCTTCEEEEESSCBC
T ss_pred CCCEEEEEECCCCccc-cc-CCCCCEEEEECCEEC
Confidence 4589999999999997 87 999999999999875
No 319
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.31 E-value=1.5e-06 Score=64.83 Aligned_cols=37 Identities=38% Similarity=0.574 Sum_probs=32.9
Q ss_pred ccCCCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 126 HIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 126 ~~~~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
+.....|++|..|.++|||++ | |++||+|++|||+++
T Consensus 19 ~~~~~~g~~V~~v~~~spA~~-g-l~~GD~I~~vng~~v 55 (195)
T 2qbw_A 19 FRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSF 55 (195)
T ss_dssp SCTTCCSEEEEEECTTSTTTT-T-CCTTCEEEEETTEEC
T ss_pred cccCCCCEEEEEECCCChHHh-C-CCCCCEEEEECCEEC
Confidence 334567999999999999999 8 999999999999875
No 320
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.31 E-value=1.7e-07 Score=77.83 Aligned_cols=79 Identities=20% Similarity=0.316 Sum_probs=15.2
Q ss_pred eeeechhhhhhhc-cCceeeEEEeecccCCCCCceEEEEEEE--cCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChh
Q psy12206 8 YYCQTCLKVIALN-VGISKFMYVRRKKVTRQGNMKILDIELV--KGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAA 84 (164)
Q Consensus 8 ~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~v~L~--k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A 84 (164)
+.+.+........ .+..+.|.++|..+.. ++.+. ....+|||++.++ +|..|.++|+|
T Consensus 268 ~~~~~~~~~l~~~~~~~~v~l~v~r~~~~~-------~v~l~~~~~~~~lG~~i~~g------------~I~~V~~gs~A 328 (388)
T 3suz_A 268 LPLATCQGIIKGLKNQTQVKLNIVSCPPVT-------TVLIKRPDLKYQLGFSVQNG------------IICSLMRGGIA 328 (388)
T ss_dssp CCSTTHHHHTTTCTTCSCEEEEEEECCSCC--------------------------------------------------
T ss_pred CCHHHHHHHHHhccCCCccccccccccccc-------eeeEeecCCCCccceEEecC------------EEEEeecCCHH
Confidence 3333433333333 4566899988754322 23342 2335799987642 88899999999
Q ss_pred hhcCCCCCCCEEEEECCeeccC
Q psy12206 85 QVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 85 ~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
+++| |++||+|++|||.++.+
T Consensus 329 ~~aG-L~~GD~Il~VNg~~v~~ 349 (388)
T 3suz_A 329 ERGG-VRVGHRIIEINGQSVVA 349 (388)
T ss_dssp ----------------------
T ss_pred HHcC-CCCCCEEEEECCEECCC
Confidence 9999 99999999999999975
No 321
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=98.29 E-value=4.2e-07 Score=68.27 Aligned_cols=34 Identities=29% Similarity=0.703 Sum_probs=31.8
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|..|.++|||+++| |++||+|++|||++|
T Consensus 109 ~~~~~V~~V~~gspA~~aG-L~~GD~Il~vng~~v 142 (192)
T 3k1r_A 109 GCGLFISHLIKGGQADSVG-LQVGDEIVRINGYSI 142 (192)
T ss_dssp TEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEEC
T ss_pred CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEEC
Confidence 3589999999999999999 999999999999975
No 322
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.29 E-value=9.5e-07 Score=60.60 Aligned_cols=36 Identities=25% Similarity=0.569 Sum_probs=34.2
Q ss_pred CCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 70 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 70 ~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
..+++|..|.++|||+++| |++||.|++|||.++.+
T Consensus 34 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~ 69 (113)
T 2pzd_A 34 QHGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQN 69 (113)
T ss_dssp SSCEEEEEEBTTSHHHHHT-CCTTCEEEEETTEECCS
T ss_pred CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCC
Confidence 4689999999999999999 99999999999999987
No 323
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=98.27 E-value=1.2e-06 Score=59.96 Aligned_cols=34 Identities=29% Similarity=0.538 Sum_probs=31.8
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|..|.++|||+++| |++||+|++|||+++
T Consensus 34 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v 67 (112)
T 2p3w_A 34 SSGIYVQEVAPNSPSQRGG-IQDGDIIVKVNGRPL 67 (112)
T ss_dssp CSSEEEEEECTTSHHHHHT-CCTTCEEEEETTEEC
T ss_pred CCCeEEEEECCCChHHHCC-CCCCCEEEEECCEEC
Confidence 4599999999999999999 999999999999875
No 324
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.27 E-value=3.8e-06 Score=63.84 Aligned_cols=81 Identities=19% Similarity=0.201 Sum_probs=57.9
Q ss_pred hhhccCceeeEEEeecccCCCCCceEEEEEEEcC-----CCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCC
Q psy12206 17 IALNVGISKFMYVRRKKVTRQGNMKILDIELVKG-----NKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQ 91 (164)
Q Consensus 17 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~v~L~k~-----~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~ 91 (164)
.....+..+.+.+.|... .+..+++|... ...||+++..-.... +...+++|..|.++|||+++| |+
T Consensus 60 ~~~~~g~~v~l~v~R~~~-----~~~~~v~l~p~~~~~~~~~lGi~~~~~~~~~--~~~~Gv~V~~V~~~spA~~aG-l~ 131 (209)
T 3rle_A 60 LKANVEKPVKMLIYSSKT-----LELRETSVTPSNLWGGQGLLGVSIRFCSFDG--ANENVWHVLEVESNSPAALAG-LR 131 (209)
T ss_dssp HHHTTTSCEEEEEEETTT-----CCEEEEEECCCSSSSSSSSSCEEEEEEECTT--GGGSCEEEEEECTTSHHHHHT-CC
T ss_pred HhcCCCCEEEEEEEecCC-----ceEEEEEEcccccccccCccceEEeecChhH--ccccceEEEEeCCCChHHHCC-CC
Confidence 345668899999987542 13455666422 235899887422111 022689999999999999999 99
Q ss_pred C-CCEEEEECCeeccC
Q psy12206 92 V-GDKLIAVRNSTSED 106 (164)
Q Consensus 92 ~-GD~Il~VNG~~v~~ 106 (164)
+ ||.|++|||. +.+
T Consensus 132 ~~GD~I~~ing~-v~~ 146 (209)
T 3rle_A 132 PHSDYIIGADTV-MNE 146 (209)
T ss_dssp TTTEEEEEESSC-CCS
T ss_pred CCCCEEEECCCE-eCC
Confidence 9 9999999997 766
No 325
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.26 E-value=1.1e-06 Score=59.23 Aligned_cols=33 Identities=24% Similarity=0.380 Sum_probs=30.2
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|..|.++|||+. | |++||+|++|||+++
T Consensus 6 ~~Gv~V~~V~~~spA~~-G-L~~GD~I~~Ing~~v 38 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAAD-V-LHAGDLITEIDGNAF 38 (100)
T ss_dssp CCCEEEEEECTTSGGGG-T-CCTTCEEEEETTBCC
T ss_pred CCCEEEEEeCCCCchHH-C-CCCCCEEEEECCEEC
Confidence 35999999999999995 8 999999999999875
No 326
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.26 E-value=7.1e-07 Score=61.45 Aligned_cols=32 Identities=31% Similarity=0.537 Sum_probs=30.1
Q ss_pred CeEEEEECCCChhhh-cCCCCCCCEEEEECCEeC
Q psy12206 132 GIYVTKIMDGGAAQV-DGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 132 gv~I~~v~~gs~A~~-~G~L~~GD~Il~VNg~~v 164 (164)
+++|..|.++|||++ +| |++||+|++|||+++
T Consensus 44 ~~~V~~V~~~spA~~~ag-L~~GD~I~~ing~~v 76 (114)
T 1uew_A 44 PHKIGRIIDGSPADRCAK-LKVGDRILAVNGQSI 76 (114)
T ss_dssp SCEEEEECTTCTTGGGSS-CCTTCBEEEETTBCT
T ss_pred CeEEEEECCCChHHHhCC-CCCCCEEEEECCEEC
Confidence 679999999999999 88 999999999999875
No 327
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.26 E-value=1.4e-06 Score=58.67 Aligned_cols=35 Identities=23% Similarity=0.378 Sum_probs=32.8
Q ss_pred CCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 70 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 70 ~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
..|++|..|.++|||+. | |++||+|++|||.++.+
T Consensus 6 ~~Gv~V~~V~~~spA~~-G-L~~GD~I~~Ing~~v~~ 40 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAAD-V-LHAGDLITEIDGNAFKS 40 (100)
T ss_dssp CCCEEEEEECTTSGGGG-T-CCTTCEEEEETTBCCSS
T ss_pred CCCEEEEEeCCCCchHH-C-CCCCCEEEEECCEECCC
Confidence 47899999999999995 8 99999999999999988
No 328
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=98.24 E-value=1.3e-06 Score=59.80 Aligned_cols=36 Identities=31% Similarity=0.535 Sum_probs=34.2
Q ss_pred CCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 70 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 70 ~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
..+++|..|.++|||+++| |++||.|++|||.++.+
T Consensus 34 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~ 69 (112)
T 2p3w_A 34 SSGIYVQEVAPNSPSQRGG-IQDGDIIVKVNGRPLVD 69 (112)
T ss_dssp CSSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCS
T ss_pred CCCeEEEEECCCChHHHCC-CCCCCEEEEECCEECCC
Confidence 4689999999999999999 99999999999999987
No 329
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.24 E-value=8.3e-07 Score=68.24 Aligned_cols=51 Identities=16% Similarity=0.282 Sum_probs=39.5
Q ss_pred eeEeeeccCCCCcccCC--CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 113 IFLCNIAGGIGNQHIPG--DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 113 v~l~~~~~~~~~~~~~~--~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
+.|.....++|+..... ..|++|..|.+++||+++| |++||+|++|||++|
T Consensus 13 v~l~k~~~glG~~l~~~~~~~gv~V~~V~~gSpA~~aG-L~~GD~Il~VNG~~V 65 (216)
T 2krg_A 13 CTMKKGPSGYGFNLHSDKSKPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCM 65 (216)
T ss_dssp EEEECCSSSSCEEECCCSSSCSCBEEEECTTSHHHHHT-CCTTCBCCEETTEEC
T ss_pred EEEEeCCCCceEEEEecCCCCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEEC
Confidence 34433345666654332 2389999999999999999 999999999999875
No 330
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.24 E-value=1.1e-06 Score=58.75 Aligned_cols=31 Identities=23% Similarity=0.175 Sum_probs=28.8
Q ss_pred eEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 133 IYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 133 v~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.+|..|.++|||+++| |++||+|++|||++|
T Consensus 4 p~V~~V~~~spA~~aG-l~~GD~I~~ing~~v 34 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQ-IAPGTELKAVDGIET 34 (95)
T ss_dssp CBEEEECTTSHHHHTT-CCTTCEEEEETTEEC
T ss_pred CEEEeeCCCCHHHHcC-CCCCCEEEEECCEEC
Confidence 4689999999999999 999999999999875
No 331
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.24 E-value=3.2e-07 Score=61.45 Aligned_cols=41 Identities=22% Similarity=0.338 Sum_probs=33.6
Q ss_pred CCCCcccCCCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 121 GIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 121 ~~~~~~~~~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
++|+... ...+++|..|.++|||+ +| |++||+|++|||++|
T Consensus 22 ~~G~~l~-~~~~~~V~~V~~~spA~-ag-L~~GD~Il~ing~~v 62 (96)
T 2edv_A 22 DYGFHIS-ESLPLTVVAVTAGGSAH-GK-LFPGDQILQMNNEPA 62 (96)
T ss_dssp SCSBCCC-SSSSCBCCCBCSSSSST-TT-SCTTCBEEEESSCBS
T ss_pred cccEEEe-cCCCeEEEEECCCCchh-hC-CCCCCEEEEECCEEC
Confidence 4555433 25689999999999995 88 999999999999875
No 332
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.22 E-value=9.3e-06 Score=68.25 Aligned_cols=82 Identities=20% Similarity=0.199 Sum_probs=55.0
Q ss_pred hccCceeeEEEeecccCCCCCceEEEEEEEcCC--------CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCC
Q psy12206 19 LNVGISKFMYVRRKKVTRQGNMKILDIELVKGN--------KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRL 90 (164)
Q Consensus 19 ~~~~~~~~~~v~~~~~~~~~~~~~~~v~L~k~~--------~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L 90 (164)
...+..+.+.+.|... ....++.+...+ ..+|+....-......+...+++|..|.++|||+++| |
T Consensus 308 ~~~g~~v~l~v~R~g~-----~~~~~v~l~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-L 381 (436)
T 4a8c_A 308 TEPGTKVKLGLLRNGK-----PLEVEVTLDTSTSSSASAEMITPALEGATLSDGQLKDGGKGIKIDEVVKGSPAAQAG-L 381 (436)
T ss_pred cCCCCEEEEEEEECCE-----EEEEEEEECCCCcccccccccccCceeeecccccccCCCCCEEEEEeCCCCHHHHcC-C
Confidence 4567899999987532 123334443322 1245554432211111123689999999999999999 9
Q ss_pred CCCCEEEEECCeeccC
Q psy12206 91 QVGDKLIAVRNSTSED 106 (164)
Q Consensus 91 ~~GD~Il~VNG~~v~~ 106 (164)
++||+|++|||.++.+
T Consensus 382 ~~GD~I~~vng~~v~~ 397 (436)
T 4a8c_A 382 QKDDVIIGVNRDRVNS 397 (436)
T ss_pred CCCCEEEEECCEECCC
Confidence 9999999999999988
No 333
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.20 E-value=7.1e-07 Score=59.61 Aligned_cols=35 Identities=23% Similarity=0.458 Sum_probs=32.8
Q ss_pred CCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 70 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 70 ~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
..+++|..|.++|||++ | |++||+|++|||.++.+
T Consensus 4 ~~Gv~V~~V~~~spA~~-G-L~~GD~Il~InG~~v~~ 38 (94)
T 2kl1_A 4 AKGVYVMSVLPNMPAAG-R-LEAGDRIAAIDGQPINT 38 (94)
T ss_dssp CCCEECCCCCTTSTTBT-T-BCTTCEEEEETTBCCCC
T ss_pred CCcEEEEEECCCChHHh-C-CCCCCEEEEECCEECCC
Confidence 46899999999999999 8 99999999999999987
No 334
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.20 E-value=2.8e-07 Score=61.41 Aligned_cols=31 Identities=29% Similarity=0.576 Sum_probs=29.0
Q ss_pred CeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 132 GIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 132 gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
|++|..|.++|||++ | |++||+|++|||+++
T Consensus 2 Gv~V~~V~~~spA~~-G-L~~GD~I~~InG~~v 32 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-K-IEVGDKIISADGKNY 32 (91)
T ss_dssp CSSCCCCCCSSCCSS-C-CCSSCEEEEETTBCC
T ss_pred ceEEEEECCCChHHH-c-CCCCCEEEEECCEEC
Confidence 788999999999999 9 999999999999875
No 335
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.19 E-value=1.4e-06 Score=58.25 Aligned_cols=33 Identities=24% Similarity=0.224 Sum_probs=31.2
Q ss_pred EEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 73 IYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 73 v~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.+|..|.++|||+++| |++||+|++|||+.+.+
T Consensus 4 p~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~ 36 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQ-IAPGTELKAVDGIETPD 36 (95)
T ss_dssp CBEEEECTTSHHHHTT-CCTTCEEEEETTEECSS
T ss_pred CEEEeeCCCCHHHHcC-CCCCCEEEEECCEECCC
Confidence 3788899999999999 99999999999999988
No 336
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=97.50 E-value=2e-07 Score=64.49 Aligned_cols=33 Identities=33% Similarity=0.514 Sum_probs=30.7
Q ss_pred CCeEEEEECCCChhhh-cCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQV-DGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~-~G~L~~GD~Il~VNg~~v 164 (164)
.|++|.+|.++|||++ +| |++||+|++|||+++
T Consensus 53 ~gv~V~~V~~~spA~~~aG-L~~GD~Il~ING~~v 86 (112)
T 2lob_A 53 VPILISEIHPGQPADRCGG-LHVGDAILAVNGVNL 86 (112)
Confidence 4799999999999999 78 999999999999875
No 337
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.18 E-value=6.4e-07 Score=59.83 Aligned_cols=33 Identities=24% Similarity=0.471 Sum_probs=30.3
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|.+|.++|||++ | |++||+|++|||+++
T Consensus 4 ~~Gv~V~~V~~~spA~~-G-L~~GD~Il~InG~~v 36 (94)
T 2kl1_A 4 AKGVYVMSVLPNMPAAG-R-LEAGDRIAAIDGQPI 36 (94)
T ss_dssp CCCEECCCCCTTSTTBT-T-BCTTCEEEEETTBCC
T ss_pred CCcEEEEEECCCChHHh-C-CCCCCEEEEECCEEC
Confidence 45899999999999999 8 999999999999875
No 338
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.18 E-value=1.9e-06 Score=61.21 Aligned_cols=32 Identities=19% Similarity=0.236 Sum_probs=30.3
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.|++|..|.++|||+ +| |++||+|++|||+++
T Consensus 57 ~g~~V~~V~~~spA~-aG-L~~GD~I~~inG~~v 88 (134)
T 2l97_A 57 SGVIVRSVQSNMPAN-GH-LEKYDVITKVDDKEI 88 (134)
T ss_dssp SCEEEEECSTTSGGG-TT-SCSSCEEEEETTEEC
T ss_pred CCEEEEEECCCCchH-HC-CCCCCEEEEECCEEc
Confidence 589999999999999 99 999999999999875
No 339
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.18 E-value=6.8e-07 Score=62.65 Aligned_cols=43 Identities=30% Similarity=0.547 Sum_probs=35.0
Q ss_pred CCCCcccC--CCCCeEEEEECCCChhhhcCCC-CCCCEEEEECCEeC
Q psy12206 121 GIGNQHIP--GDNGIYVTKIMDGGAAQVDGRL-QVGDKLIAVRNSTR 164 (164)
Q Consensus 121 ~~~~~~~~--~~~gv~I~~v~~gs~A~~~G~L-~~GD~Il~VNg~~v 164 (164)
++|+.... ...+++|..|.++|||+++| | ++||+|++|||+++
T Consensus 21 glG~~~~~~~~~~~~~V~~V~~~spA~~aG-ll~~GD~I~~ing~~v 66 (127)
T 1b8q_A 21 GLGFLVKERVSKPPVIISDLIRGGAAEQSG-LIQAGDIILAVNDRPL 66 (127)
T ss_dssp CCSCCEEECTTSSCEEECCCSSSSSHHHHS-SCCTTTCCCEETTEEC
T ss_pred cEeEEEEecCCCCCEEEEEeCCCCHHHHcC-CCCCCCEEEEECCEEC
Confidence 45554332 23489999999999999999 7 99999999999875
No 340
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.17 E-value=2.3e-06 Score=60.77 Aligned_cols=35 Identities=17% Similarity=0.227 Sum_probs=33.1
Q ss_pred CCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 70 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 70 ~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
..+++|..|.++|||+ +| |++||.|++|||.++.+
T Consensus 56 ~~g~~V~~V~~~spA~-aG-L~~GD~I~~inG~~v~~ 90 (134)
T 2l97_A 56 TSGVIVRSVQSNMPAN-GH-LEKYDVITKVDDKEIAS 90 (134)
T ss_dssp CSCEEEEECSTTSGGG-TT-SCSSCEEEEETTEECCC
T ss_pred CCCEEEEEECCCCchH-HC-CCCCCEEEEECCEEcCC
Confidence 3689999999999999 99 99999999999999987
No 341
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.15 E-value=2.2e-06 Score=57.36 Aligned_cols=47 Identities=23% Similarity=0.323 Sum_probs=35.0
Q ss_pred EeeeccCCCCcccCCCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 115 LCNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 115 l~~~~~~~~~~~~~~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
+.....++|+.......|++|..|.++ |+++| |++||+|++|||++|
T Consensus 16 l~~~~~g~G~~i~~~~~Gv~V~~v~~~--a~~aG-L~~GD~I~~vng~~v 62 (96)
T 1ujv_A 16 IVKGAQGFGFTIADSPTGQRVKQILDI--QGCPG-LCEGDLIVEINQQNV 62 (96)
T ss_dssp EECCSSSSSEEEEEETTEEEEEEESCG--GGSTT-CCSSCEEEEETTEEC
T ss_pred EEeCCCceeEEEEcCCCCEEEEEEecc--cccCC-CCCCCEEEEECCEEC
Confidence 333344666654333348999999983 77888 999999999999875
No 342
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.15 E-value=1.1e-06 Score=57.68 Aligned_cols=32 Identities=28% Similarity=0.195 Sum_probs=29.4
Q ss_pred CeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 132 GIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 132 gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
|+.|..+.|+|||+++| |++||+|++|||+++
T Consensus 20 G~~V~~~~~~s~A~~aG-l~~GD~I~~ing~~v 51 (87)
T 2i6v_A 20 GYRVSPGKDPVLFESIG-LQDGDMAVALNGLDL 51 (87)
T ss_dssp EEEEEECSCHHHHHHTT-CCTTCEEEEETTEET
T ss_pred EEEEEeCCCCCHHHHCC-CCCCCEEEEECCEEC
Confidence 77788888889999999 999999999999875
No 343
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.15 E-value=4.2e-07 Score=60.55 Aligned_cols=33 Identities=27% Similarity=0.562 Sum_probs=30.8
Q ss_pred cEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 72 GIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 72 gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
|++|..|.++|||++ | |++||+|++|||.++.+
T Consensus 2 Gv~V~~V~~~spA~~-G-L~~GD~I~~InG~~v~~ 34 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-K-IEVGDKIISADGKNYQS 34 (91)
T ss_dssp CSSCCCCCCSSCCSS-C-CCSSCEEEEETTBCCSS
T ss_pred ceEEEEECCCChHHH-c-CCCCCEEEEECCEECCC
Confidence 577889999999999 8 99999999999999987
No 344
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.15 E-value=1.3e-06 Score=57.56 Aligned_cols=32 Identities=25% Similarity=0.412 Sum_probs=28.9
Q ss_pred CeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 132 GIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 132 gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.++|..|.++|||+++| |++||+|++|||+++
T Consensus 5 ~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v 36 (91)
T 2zpm_A 5 EPVLENVQPNSAASXAG-LQAGDRIVXVDGQPL 36 (91)
T ss_dssp -CBCSEECTTSHHHHTT-CCTTCEEEEETTEEC
T ss_pred CeEEEEECCCChHHhcC-CCCCCEEEEECCeEc
Confidence 46789999999999999 999999999999875
No 345
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.14 E-value=1.7e-06 Score=71.97 Aligned_cols=43 Identities=28% Similarity=0.543 Sum_probs=35.6
Q ss_pred CCCCcccC-CCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 121 GIGNQHIP-GDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 121 ~~~~~~~~-~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
++|+.... ...|++|..|.+||||+++| |++||+|++|||+++
T Consensus 20 ~lG~~i~gg~~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v 63 (391)
T 3tsz_A 20 SVGLRLAGGNDVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDF 63 (391)
T ss_dssp SCCEEEEEETTTEEEEEEECTTCHHHHTT-CCTTEEEEEETTEEC
T ss_pred ceeEEEEecCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEEC
Confidence 45544332 23699999999999999999 999999999999875
No 346
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.13 E-value=1.5e-06 Score=57.09 Aligned_cols=35 Identities=29% Similarity=0.194 Sum_probs=32.2
Q ss_pred CcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 71 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 71 ~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.|+.|..+.|+|+|+++| |++||.|++|||.++.+
T Consensus 19 ~G~~V~~~~~~s~A~~aG-l~~GD~I~~ing~~v~~ 53 (87)
T 2i6v_A 19 LGYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTD 53 (87)
T ss_dssp EEEEEEECSCHHHHHHTT-CCTTCEEEEETTEETTC
T ss_pred EEEEEEeCCCCCHHHHCC-CCCCCEEEEECCEECCC
Confidence 467888889999999999 99999999999999988
No 347
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=98.08 E-value=2.1e-06 Score=67.84 Aligned_cols=44 Identities=32% Similarity=0.480 Sum_probs=35.5
Q ss_pred cCCCCcccC---CCCCeEEEEECCCChhhh-cCCCCCCCEEEEECCEeC
Q psy12206 120 GGIGNQHIP---GDNGIYVTKIMDGGAAQV-DGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 120 ~~~~~~~~~---~~~gv~I~~v~~gs~A~~-~G~L~~GD~Il~VNg~~v 164 (164)
+++|+.... ...|++|..|.++|||++ +| |++||+|++|||++|
T Consensus 89 ~glGf~I~gg~d~~~gi~V~~V~~gspA~~~aG-L~~GD~Il~VNG~~v 136 (263)
T 1z87_A 89 GGLGISIKGGRENKMPILISKIFKGLAADQTEA-LFVGDAILSVNGEDL 136 (263)
T ss_dssp CCCCCEEEEETTTTEEEEEEECCTTSHHHHCTT-CCSSCEEEEESSCBC
T ss_pred CCEeEEEeeccCCCCCEEEEEECCCCHHHHhCC-CCCCCEEEEECCEEC
Confidence 455554422 235899999999999999 57 999999999999875
No 348
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=98.08 E-value=3.6e-06 Score=58.42 Aligned_cols=49 Identities=27% Similarity=0.301 Sum_probs=37.7
Q ss_pred eeEeeeccCCCCcccCCCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 113 IFLCNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 113 v~l~~~~~~~~~~~~~~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
|+|.+...++|+.......|.+|..|.+ +|..+| |++||+|++|||++|
T Consensus 16 V~L~Kg~~G~GFsI~~~~~g~~V~~I~~--~~~~aG-L~~GD~Il~VNG~~v 64 (113)
T 3soe_A 16 IPLIKGPKGFGFAIADSPTGQKVKMILD--SQWCQG-LQKGDIIKEIYHQNV 64 (113)
T ss_dssp EEEECBTTBSSEEEEEETTEEEEEEESC--GGGSTT-CCTTCEEEEETTEEC
T ss_pred EEEEECCCcccEEEeCCCCCcEEEEecC--hHHhCC-CCCCCEEEEECCEEC
Confidence 4555556677776644445788999988 577777 999999999999986
No 349
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.08 E-value=1.6e-06 Score=57.02 Aligned_cols=34 Identities=24% Similarity=0.397 Sum_probs=31.3
Q ss_pred cEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 72 GIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 72 gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
+++|..|.++|||+++| |++||+|++|||.++.+
T Consensus 5 ~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~ 38 (91)
T 2zpm_A 5 EPVLENVQPNSAASXAG-LQAGDRIVXVDGQPLTQ 38 (91)
T ss_dssp -CBCSEECTTSHHHHTT-CCTTCEEEEETTEECCC
T ss_pred CeEEEEECCCChHHhcC-CCCCCEEEEECCeEcCC
Confidence 45788999999999999 99999999999999987
No 350
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.07 E-value=1.3e-06 Score=60.90 Aligned_cols=33 Identities=9% Similarity=0.290 Sum_probs=31.0
Q ss_pred CCeEEEEECC--CChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMD--GGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~--gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.|++|..|.+ ++||+++| |++||+|++|||++|
T Consensus 44 ~gv~V~~V~~~~~spA~~aG-L~~GD~Il~Vng~~v 78 (118)
T 2yub_A 44 TTVQVKEVNRMHISPNNRNA-IHPGDRILEINGTPV 78 (118)
T ss_dssp CEEEEEECCTTTSCTTHHHH-CCTTCCEEEESSSBT
T ss_pred CcEEEEEecCCCCChHHHcC-CCCCCEEEEECCEEC
Confidence 5899999999 99999999 999999999999875
No 351
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=98.05 E-value=5.5e-06 Score=69.18 Aligned_cols=52 Identities=15% Similarity=0.318 Sum_probs=40.5
Q ss_pred CCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 51 NKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 51 ~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.-|+||.+....+.+ ....++|..|.++|||+++| |++||+|++|||.++.+
T Consensus 73 ~~G~~~~l~~~~~~~---~~~~~~V~~V~~gsPA~~AG-L~~GD~I~~InG~~v~~ 124 (403)
T 3k50_A 73 SYGFDYTLYKVLDND---TAYNALISYVVPGSPAEEAG-LQRGHWIMMMNGDYITK 124 (403)
T ss_dssp BCSEEEEEEECTTCS---SCEEEEEEEECTTSHHHHTT-CCTTCEEEEETTBCBCT
T ss_pred ccceEEEEEEcCCCC---cceeEEEEEeCCCChHHHcC-CCCCCEEEEECCEEccc
Confidence 356777776543211 11247899999999999999 99999999999999987
No 352
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=97.94 E-value=6.1e-06 Score=56.00 Aligned_cols=32 Identities=28% Similarity=0.195 Sum_probs=28.5
Q ss_pred CeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 132 GIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 132 gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
|+.|....|+|||+++| |++||+|++|||+++
T Consensus 38 G~~V~~~~pas~A~~aG-l~~GDvI~~ing~~v 69 (105)
T 2i4s_A 38 GYRVSPGKDPVLFESIG-LQDGDMAVALNGLDL 69 (105)
T ss_dssp EEEEEECSCTHHHHHHT-CCTTCEEEEETTEET
T ss_pred EEEEecCCCCCHHHHcC-CCCCCEEEEECCEEC
Confidence 66778888888889999 999999999999875
No 353
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=97.92 E-value=1.9e-05 Score=63.64 Aligned_cols=36 Identities=22% Similarity=0.361 Sum_probs=34.1
Q ss_pred CCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 70 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 70 ~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
..+++|..|.++|||+++| |++||+|++|||.++.+
T Consensus 241 ~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~ 276 (324)
T 1y8t_A 241 TLGAKIVEVVAGGAAANAG-VPKGVVVTKVDDRPINS 276 (324)
T ss_dssp SSSEEEEEECTTSTTTTTT-CCTTCEEEEETTEECCS
T ss_pred CCceEEEEECCCChHHHcC-CCCCCEEEEECCEECCC
Confidence 4689999999999999999 99999999999999988
No 354
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=97.92 E-value=6.9e-06 Score=69.81 Aligned_cols=44 Identities=27% Similarity=0.531 Sum_probs=35.6
Q ss_pred cCCCCcccC-CCCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 120 GGIGNQHIP-GDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 120 ~~~~~~~~~-~~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.++|+.... ...|++|..|.+||||+++| |++||+|++|||++|
T Consensus 11 ~~lG~~i~gg~~~Gi~V~~V~~gspA~~aG-L~~GD~Il~VNG~~v 55 (468)
T 3shw_A 11 DSVGLRLAGGNDVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDF 55 (468)
T ss_dssp SSCCEEEEEETTTEEEEEEECSSSHHHHTT-CCTTEEEEEETTEEC
T ss_pred CccceEEEccCcCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEEC
Confidence 344444322 22599999999999999999 999999999999875
No 355
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=97.91 E-value=7.8e-06 Score=55.46 Aligned_cols=35 Identities=29% Similarity=0.194 Sum_probs=31.2
Q ss_pred CcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 71 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 71 ~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.++.|..+.|+|+|+++| |++||.|++|||.++.+
T Consensus 37 ~G~~V~~~~pas~A~~aG-l~~GDvI~~ing~~v~~ 71 (105)
T 2i4s_A 37 LGYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTD 71 (105)
T ss_dssp EEEEEEECSCTHHHHHHT-CCTTCEEEEETTEETTS
T ss_pred EEEEEecCCCCCHHHHcC-CCCCCEEEEECCEECCC
Confidence 356778888888899999 99999999999999987
No 356
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=97.88 E-value=1.2e-05 Score=65.58 Aligned_cols=34 Identities=18% Similarity=0.518 Sum_probs=32.0
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|.+|.++|||+++| |++||+|++|||++|
T Consensus 262 ~~G~~V~~V~~~spA~~aG-L~~GDvI~~ing~~v 295 (345)
T 3stj_A 262 QRGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPL 295 (345)
T ss_dssp CSSEEEEEECTTSHHHHHT-CCTTCEECEETTEEC
T ss_pred CceEEEEEeccCChHHHcC-CCCCCEEEEECCEEC
Confidence 3699999999999999999 999999999999875
No 357
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=97.87 E-value=2.4e-05 Score=64.66 Aligned_cols=49 Identities=24% Similarity=0.452 Sum_probs=41.4
Q ss_pred CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 52 KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 52 ~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.|+|+.+..... .+.+++|..|.++|||+++| |++||+|++|||.++.+
T Consensus 85 ~giG~~~~~~~~-----~~~~~~V~~v~~~spA~~aG-l~~GD~I~~Ing~~v~~ 133 (388)
T 1fc6_A 85 TGVGLEITYDGG-----SGKDVVVLTPAPGGPAEKAG-ARAGDVIVTVDGTAVKG 133 (388)
T ss_dssp BBCSEEEEECTT-----CSSCEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTT
T ss_pred EEEEEEEEEeec-----CCCcEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCC
Confidence 578998875310 13578999999999999999 99999999999999987
No 358
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=97.85 E-value=2.4e-05 Score=54.96 Aligned_cols=33 Identities=15% Similarity=0.290 Sum_probs=30.5
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|..|.+++||+++ |++||+|++|||+++
T Consensus 24 ~~gv~V~~V~~~spA~~a--L~~GD~Il~InG~~v 56 (125)
T 2hga_A 24 PDGVQIDSVVPGSPASKV--LTPGLVIESINGMPT 56 (125)
T ss_dssp CCCEEEEEECSSSGGGGT--SCTTCEEEEETTEEC
T ss_pred CCceEEEEECCCChHHHh--cCCCCEEEEECCEEc
Confidence 459999999999999998 999999999999875
No 359
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=97.84 E-value=2.8e-05 Score=54.62 Aligned_cols=35 Identities=14% Similarity=0.313 Sum_probs=32.9
Q ss_pred CCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 70 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 70 ~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
..+++|..|.+++||+++ |++||+|++|||.++.+
T Consensus 24 ~~gv~V~~V~~~spA~~a--L~~GD~Il~InG~~v~~ 58 (125)
T 2hga_A 24 PDGVQIDSVVPGSPASKV--LTPGLVIESINGMPTSN 58 (125)
T ss_dssp CCCEEEEEECSSSGGGGT--SCTTCEEEEETTEECSS
T ss_pred CCceEEEEECCCChHHHh--cCCCCEEEEECCEEcCC
Confidence 468999999999999998 99999999999999987
No 360
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=97.83 E-value=2.2e-05 Score=63.39 Aligned_cols=34 Identities=26% Similarity=0.555 Sum_probs=31.9
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|.+|.++|||+++| |++||+|++|||+++
T Consensus 255 ~~gv~V~~V~~~spA~~aG-l~~GDvI~~ing~~v 288 (325)
T 1lcy_A 255 QHGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMV 288 (325)
T ss_dssp SSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEEC
T ss_pred CCCeEEEEeCcCChHHHCC-CCCCCEEEEECCEEc
Confidence 3599999999999999999 999999999999875
No 361
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=97.83 E-value=1.6e-05 Score=64.02 Aligned_cols=34 Identities=35% Similarity=0.510 Sum_probs=31.9
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|..|.++|||+++| |++||+|++|||+++
T Consensus 243 ~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v 276 (318)
T 1te0_A 243 LQGIVVNEVSPDGPAANAG-IQVNDLIISVDNKPA 276 (318)
T ss_dssp CCCEEEEEECTTSTTTTTC-CCTTCCEEEETTEEC
T ss_pred CCcEEEEEeCCCChHHHCC-CCCCCEEEEECCEEc
Confidence 4689999999999999999 999999999999875
No 362
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=97.83 E-value=1.5e-05 Score=65.13 Aligned_cols=36 Identities=17% Similarity=0.504 Sum_probs=34.4
Q ss_pred CCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 70 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 70 ~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
..|++|..|.++|||+++| |++||.|++|||+++.+
T Consensus 262 ~~G~~V~~V~~~spA~~aG-L~~GDvI~~ing~~v~~ 297 (345)
T 3stj_A 262 QRGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLNS 297 (345)
T ss_dssp CSSEEEEEECTTSHHHHHT-CCTTCEECEETTEECSC
T ss_pred CceEEEEEeccCChHHHcC-CCCCCEEEEECCEECCC
Confidence 4789999999999999999 99999999999999987
No 363
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=97.81 E-value=1.9e-05 Score=63.48 Aligned_cols=36 Identities=33% Similarity=0.477 Sum_probs=34.2
Q ss_pred CCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 70 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 70 ~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
..+++|..|.++|||+++| |++||+|++|||+++.+
T Consensus 243 ~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~ 278 (318)
T 1te0_A 243 LQGIVVNEVSPDGPAANAG-IQVNDLIISVDNKPAIS 278 (318)
T ss_dssp CCCEEEEEECTTSTTTTTC-CCTTCCEEEETTEECCC
T ss_pred CCcEEEEEeCCCChHHHCC-CCCCCEEEEECCEEcCC
Confidence 4689999999999999999 99999999999999987
No 364
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=97.76 E-value=2.9e-05 Score=62.76 Aligned_cols=36 Identities=25% Similarity=0.569 Sum_probs=34.3
Q ss_pred CCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 70 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 70 ~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
..+++|..|.++|||+++| |++||.|++|||+++.+
T Consensus 255 ~~gv~V~~V~~~spA~~aG-l~~GDvI~~ing~~v~~ 290 (325)
T 1lcy_A 255 QHGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQN 290 (325)
T ss_dssp SSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCS
T ss_pred CCCeEEEEeCcCChHHHCC-CCCCCEEEEECCEEcCC
Confidence 3689999999999999999 99999999999999988
No 365
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=97.75 E-value=2.6e-05 Score=62.83 Aligned_cols=34 Identities=24% Similarity=0.362 Sum_probs=31.9
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|..|.++|||+++| |++||+|++|||+++
T Consensus 241 ~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v 274 (324)
T 1y8t_A 241 TLGAKIVEVVAGGAAANAG-VPKGVVVTKVDDRPI 274 (324)
T ss_dssp SSSEEEEEECTTSTTTTTT-CCTTCEEEEETTEEC
T ss_pred CCceEEEEECCCChHHHcC-CCCCCEEEEECCEEC
Confidence 4689999999999999999 999999999999875
No 366
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=97.73 E-value=2.9e-05 Score=64.22 Aligned_cols=34 Identities=24% Similarity=0.428 Sum_probs=31.8
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..+++|..|.++|||+++| |++||+|++|||+++
T Consensus 98 ~~~~~V~~v~~~spA~~aG-l~~GD~I~~Ing~~v 131 (388)
T 1fc6_A 98 GKDVVVLTPAPGGPAEKAG-ARAGDVIVTVDGTAV 131 (388)
T ss_dssp SSCEEEEEECTTSHHHHTT-CCTTCEEEEETTEEC
T ss_pred CCcEEEEEeCCCChHHHcC-CCCCCEEEEECCEEC
Confidence 3689999999999999999 999999999999875
No 367
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=97.72 E-value=3.2e-05 Score=65.31 Aligned_cols=33 Identities=21% Similarity=0.486 Sum_probs=31.6
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.|++|..|.++|||+++| |++||+|++|||++|
T Consensus 282 ~G~~V~~V~~~spA~~aG-L~~GDvI~~vnG~~v 314 (451)
T 3pv2_A 282 QGALVSQVNPNSPAELAG-LKAGDIITQINDTKI 314 (451)
T ss_dssp CCEEEEEECTTSHHHHHT-CCTTCEEEEETTEEC
T ss_pred ceEEEEecCCCChHHHcC-CCCCCEEEEECCEEc
Confidence 699999999999999999 999999999999975
No 368
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=97.68 E-value=4.3e-05 Score=66.72 Aligned_cols=45 Identities=24% Similarity=0.401 Sum_probs=39.5
Q ss_pred CCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeecc
Q psy12206 52 KGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSE 105 (164)
Q Consensus 52 ~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~ 105 (164)
.++|+.+... ..+++|..|.++|||+++| |++||+|++|||..+.
T Consensus 485 ~~lG~~~~~~--------~~gv~V~~V~~~spA~~AG-L~~GD~I~aInG~~v~ 529 (597)
T 4fgm_A 485 VNFGAKYKAS--------PQGLDVLNVYHDESAYHAG-LSAGDKIIAIDHLQAT 529 (597)
T ss_dssp CCCSEEEEEE--------TTEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECC
T ss_pred cccceEEecc--------CCeEEEEEeCCCChHHHCC-CCCCCEEEEECCEECC
Confidence 4689987653 2479999999999999999 9999999999999995
No 369
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.66 E-value=3.2e-05 Score=64.52 Aligned_cols=32 Identities=19% Similarity=0.347 Sum_probs=29.6
Q ss_pred CeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 132 GIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 132 gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.++|..|.++|||+++| |++||+|++|||++|
T Consensus 91 ~~~V~~V~~gsPA~~AG-L~~GD~I~~InG~~v 122 (403)
T 3k50_A 91 NALISYVVPGSPAEEAG-LQRGHWIMMMNGDYI 122 (403)
T ss_dssp EEEEEEECTTSHHHHTT-CCTTCEEEEETTBCB
T ss_pred eEEEEEeCCCChHHHcC-CCCCCEEEEECCEEc
Confidence 36799999999999999 999999999999864
No 370
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=97.65 E-value=5e-05 Score=61.87 Aligned_cols=35 Identities=29% Similarity=0.457 Sum_probs=33.8
Q ss_pred CcEEEEEeCCCChhhhcCCCCC-----------CCEEEEECCeeccC
Q psy12206 71 NGIYVTKIMDGGAAQVDGRLQV-----------GDKLIAVRNSTSED 106 (164)
Q Consensus 71 ~gv~V~~V~~gs~A~~~G~L~~-----------GD~Il~VNG~~v~~ 106 (164)
.|++|..|.++|||+++| |++ ||.|++|||+++.+
T Consensus 251 ~Gv~V~~V~~~spA~~AG-l~~~~~~~~~~l~~GDvI~~ing~~v~~ 296 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAG-LQSTKRDGYGRLVLGDIITSVNGTKVSN 296 (348)
T ss_dssp SSEEEEECCSSSHHHHHT-CCCCEECSSSCEECCCEECEETTBCCSS
T ss_pred ceEEEEEecCCChHHHcC-CccccccccCCCCCCCEEEEECCEEeCC
Confidence 689999999999999999 999 99999999999988
No 371
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=97.65 E-value=3e-05 Score=67.76 Aligned_cols=33 Identities=30% Similarity=0.488 Sum_probs=31.0
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.|++|.+|.++|||+++| |++||+|++|||++|
T Consensus 496 ~gv~V~~V~~~spA~~AG-L~~GD~I~aInG~~v 528 (597)
T 4fgm_A 496 QGLDVLNVYHDESAYHAG-LSAGDKIIAIDHLQA 528 (597)
T ss_dssp TEEEEEEECTTSHHHHHT-CCTTCEEEEETTEEC
T ss_pred CeEEEEEeCCCChHHHCC-CCCCCEEEEECCEEC
Confidence 478999999999999999 999999999999875
No 372
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=97.51 E-value=5.4e-05 Score=61.70 Aligned_cols=33 Identities=30% Similarity=0.451 Sum_probs=31.3
Q ss_pred CCeEEEEECCCChhhhcCCCCC-----------CCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQV-----------GDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~-----------GD~Il~VNg~~v 164 (164)
.|++|.+|.++|||+++| |++ ||+|++|||++|
T Consensus 251 ~Gv~V~~V~~~spA~~AG-l~~~~~~~~~~l~~GDvI~~ing~~v 294 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAG-LQSTKRDGYGRLVLGDIITSVNGTKV 294 (348)
T ss_dssp SSEEEEECCSSSHHHHHT-CCCCEECSSSCEECCCEECEETTBCC
T ss_pred ceEEEEEecCCChHHHcC-CccccccccCCCCCCCEEEEECCEEe
Confidence 599999999999999999 999 999999999875
No 373
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=97.43 E-value=2e-05 Score=63.77 Aligned_cols=33 Identities=21% Similarity=0.523 Sum_probs=0.0
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.|++|.+|.++|||+++| |++||+|++|||+++
T Consensus 254 ~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v 286 (332)
T 3num_A 254 SGAYIIEVIPDTPAEAGG-LKENDVIISINGQSV 286 (332)
T ss_dssp ----------------------------------
T ss_pred CceEEEEeccCCChHHcC-CCCCCEEEEECCEEC
Confidence 589999999999999999 999999999999864
No 374
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=97.33 E-value=3.1e-05 Score=62.65 Aligned_cols=36 Identities=19% Similarity=0.441 Sum_probs=0.0
Q ss_pred CCcEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 70 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 70 ~~gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
..+++|..|.++|||+++| |++||+|++|||+++.+
T Consensus 253 ~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~ 288 (332)
T 3num_A 253 ISGAYIIEVIPDTPAEAGG-LKENDVIISINGQSVVS 288 (332)
T ss_dssp -------------------------------------
T ss_pred CCceEEEEeccCCChHHcC-CCCCCEEEEECCEECCC
Confidence 3679999999999999999 99999999999999977
No 375
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=97.13 E-value=7.8e-05 Score=62.89 Aligned_cols=33 Identities=18% Similarity=0.497 Sum_probs=31.1
Q ss_pred CCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.|++|.+|.++|||+++| |++||+|++|||++|
T Consensus 286 ~G~~V~~V~~gspA~~AG-L~~GDvI~~inG~~v 318 (448)
T 1ky9_A 286 RGAFVSQVLPNSSAAKAG-IKAGDVITSLNGKPI 318 (448)
T ss_dssp CSEECCCCTTCSSSTTTT-CCTTCEECBSSSSBC
T ss_pred CceEEEEeccCCHHHHcC-CCCCCEEEEECCEEc
Confidence 589999999999999999 999999999999865
No 376
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=96.78 E-value=0.0016 Score=56.24 Aligned_cols=33 Identities=18% Similarity=0.340 Sum_probs=29.8
Q ss_pred CCCeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 130 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 130 ~~gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
..|++|..|.|+|||++ + |++||.|++|||+.|
T Consensus 276 ~~Gv~V~~V~~~spA~~-a-l~~GDvI~~idg~~V 308 (539)
T 4fln_A 276 NEGVLVRRVEPTSDASK-V-LKEGDVIVSFDDLHV 308 (539)
T ss_dssp SBCEEEEEECTTSGGGG-T-CCTTCEEEEETTEEC
T ss_pred cCceeeecccCCChHHh-C-ccCCCEEEEECCEEe
Confidence 35999999999999986 5 999999999999875
No 377
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=96.40 E-value=0.0045 Score=56.37 Aligned_cols=46 Identities=13% Similarity=0.080 Sum_probs=39.3
Q ss_pred CCcCEEEecCCCCCCCCCCCcEEEEEeCCC--------ChhhhcC-CCCCCCEEEEECCeeccC
Q psy12206 52 KGLGFSIAGGIGNQHIPGDNGIYVTKIMDG--------GAAQVDG-RLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 52 ~glGf~i~gg~~~~~~~~~~gv~V~~V~~g--------s~A~~~G-~L~~GD~Il~VNG~~v~~ 106 (164)
.++|+.+.-. +.+++|..|.++ |||+++| .|+ ||+|++|||+++.+
T Consensus 737 ~g~G~~~~~~--------~~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~ 791 (1045)
T 1k32_A 737 GRIACDFKLD--------GDHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGA 791 (1045)
T ss_dssp CBCSEEEEEE--------TTEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBT
T ss_pred ceecEEEEEe--------CCEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccc
Confidence 5789887642 257899999998 9999999 489 99999999999987
No 378
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=96.04 E-value=0.0042 Score=56.62 Aligned_cols=33 Identities=18% Similarity=0.117 Sum_probs=29.3
Q ss_pred CCeEEEEECCC--------ChhhhcCC-CCCCCEEEEECCEeC
Q psy12206 131 NGIYVTKIMDG--------GAAQVDGR-LQVGDKLIAVRNSTR 164 (164)
Q Consensus 131 ~gv~I~~v~~g--------s~A~~~G~-L~~GD~Il~VNg~~v 164 (164)
.+++|..+.++ |||+++|. |+ ||+|++|||+++
T Consensus 748 ~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~ 789 (1045)
T 1k32_A 748 DHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETV 789 (1045)
T ss_dssp TEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEEC
T ss_pred CEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEc
Confidence 46789999998 99999983 89 999999999875
No 379
>1at0_A 17-hedgehog; developmental signaling molecule, cholesterol transfer, signaling protein; 1.90A {Drosophila melanogaster} SCOP: b.86.1.1
Probab=64.40 E-value=8.9 Score=26.74 Aligned_cols=73 Identities=8% Similarity=0.077 Sum_probs=37.0
Q ss_pred CCCCCCEEEEEC--CeeccC-----CcCCC--ceeEeeeccCCCCc-ccCCCCCeEEEEECCC-ChhhhcCCCCCCCEEE
Q psy12206 89 RLQVGDKLIAVR--NSTSED-----KRASP--GIFLCNIAGGIGNQ-HIPGDNGIYVTKIMDG-GAAQVDGRLQVGDKLI 157 (164)
Q Consensus 89 ~L~~GD~Il~VN--G~~v~~-----~~a~~--~v~l~~~~~~~~~~-~~~~~~gv~I~~v~~g-s~A~~~G~L~~GD~Il 157 (164)
.|++||+++..| |....+ .+..+ .-.+..+....|.. ...+...+|+..-..+ ..+-.|+.|++||.|+
T Consensus 20 eL~~GD~Vla~d~~G~~~~s~V~~~~~r~~~~~~~f~~I~t~~g~~L~lTp~H~i~v~~~~~~~~~~v~A~~l~~GD~v~ 99 (145)
T 1at0_A 20 ELSIGDRVLSMTANGQAVYSEVILFMDRNLEQMQNFVQLHTDGGAVLTVTPAHLVSVWQPESQKLTFVFADRIEEKNQVL 99 (145)
T ss_dssp GCCTTCEEEEECTTSCEEEEEEEEEEEEEEEEEEEEEEEEETTSCEEEECTTCEEEEEETTTTEEEEEEGGGCCTTCEEE
T ss_pred HcCCCCEEEEECCCCCEEEEEEEEEEeeCCCcceeEEEEEECCCCEEEEeCCCEEEEecCCCCcEEEEEHHHCcCCCEEE
Confidence 399999999987 433222 00001 11122222222222 2334456666542110 1233455699999999
Q ss_pred EECC
Q psy12206 158 AVRN 161 (164)
Q Consensus 158 ~VNg 161 (164)
..+|
T Consensus 100 ~~~~ 103 (145)
T 1at0_A 100 VRDV 103 (145)
T ss_dssp EECT
T ss_pred EecC
Confidence 8876
No 380
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=57.02 E-value=19 Score=31.27 Aligned_cols=30 Identities=30% Similarity=0.548 Sum_probs=23.2
Q ss_pred cEEEEEeCCCChhhhcCCCCCCCEEEEECCeeccC
Q psy12206 72 GIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 72 gv~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.+||.++..... + +..||+|++|||+++..
T Consensus 97 ~i~V~dv~~~~s----~-I~vGdEIlsING~pv~e 126 (583)
T 3dor_A 97 RFYFVDIMTFSS----E-IRVGDELLEVDGAPVQD 126 (583)
T ss_dssp CEEEEEECSSCC----S-SCTTCEEEEETTEEHHH
T ss_pred cEEEEecccccc----C-CCCCCEEEEECCccHHH
Confidence 478776633322 4 99999999999999987
No 381
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=47.60 E-value=18 Score=31.41 Aligned_cols=28 Identities=29% Similarity=0.500 Sum_probs=20.4
Q ss_pred CeEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy12206 132 GIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 132 gv~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v 164 (164)
.+||.++....+ + +..||.|++|||+++
T Consensus 97 ~i~V~dv~~~~s----~-I~vGdEIlsING~pv 124 (583)
T 3dor_A 97 RFYFVDIMTFSS----E-IRVGDELLEVDGAPV 124 (583)
T ss_dssp CEEEEEECSSCC----S-SCTTCEEEEETTEEH
T ss_pred cEEEEecccccc----C-CCCCCEEEEECCccH
Confidence 466766633222 5 999999999999874
No 382
>1a62_A RHO; transcription termination, termination, RNA binding domain, transcription regulation, OB fold, F1-ATPase; 1.55A {Escherichia coli BL21} SCOP: a.140.3.1 b.40.4.5 PDB: 1a63_A 2a8v_A 1a8v_A
Probab=27.90 E-value=89 Score=21.27 Aligned_cols=46 Identities=24% Similarity=0.364 Sum_probs=27.8
Q ss_pred EEEcCCCCcCEEEecCCCCCCCCCCCcEEEEEeCCCChhhhcCCCCCCCEEEE
Q psy12206 46 ELVKGNKGLGFSIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIA 98 (164)
Q Consensus 46 ~L~k~~~glGf~i~gg~~~~~~~~~~gv~V~~V~~gs~A~~~G~L~~GD~Il~ 98 (164)
.|.--+.||||-...+. .|.++..-+||+ .+-..+-+ |+.||.|.-
T Consensus 54 vlei~~dG~GFlr~~~~--~y~~~~~DiyVs----~~~irrf~-lr~GD~V~g 99 (130)
T 1a62_A 54 VLEILQDGFGFLRSADS--SYLAGPDDIYVS----PSQIRRFN-LRTGDTISG 99 (130)
T ss_dssp EEEECTTSCEEEECGGG--TTCCCTTCEEEC----HHHHHHTT-CCTTCEEEE
T ss_pred EEEEcCCCeEEEecCCc--CCCCCCCCEEEC----HHHHhHhC-CCCCCEEEE
Confidence 34444679999876531 122344678885 22233347 999999854
No 383
>2j3t_D Trafficking protein particle complex subunit 4; trapp, palmitate, transport, lipoprotein, ER-golgi transport apparatus, protein transport; HET: PLM; 2.4A {Homo sapiens} PDB: 2zmv_A 2jsn_A
Probab=21.60 E-value=59 Score=24.46 Aligned_cols=23 Identities=26% Similarity=0.492 Sum_probs=20.5
Q ss_pred hhhhcCCCCCCCEEEEECCeeccC
Q psy12206 83 AAQVDGRLQVGDKLIAVRNSTSED 106 (164)
Q Consensus 83 ~A~~~G~L~~GD~Il~VNG~~v~~ 106 (164)
.++++| +..|..++++||.++.+
T Consensus 51 ~~~~d~-~~~~~~~~~~ng~~~~~ 73 (219)
T 2j3t_D 51 FGQRDG-IRVGHAVLAINGMDVNG 73 (219)
T ss_dssp ECCCTT-CCTTCEEEEETTEECBT
T ss_pred ecccCC-ccccceeeecCCccCCC
Confidence 456788 99999999999999987
No 384
>2j3t_D Trafficking protein particle complex subunit 4; trapp, palmitate, transport, lipoprotein, ER-golgi transport apparatus, protein transport; HET: PLM; 2.4A {Homo sapiens} PDB: 2zmv_A 2jsn_A
Probab=20.34 E-value=58 Score=24.51 Aligned_cols=20 Identities=30% Similarity=0.571 Sum_probs=17.4
Q ss_pred hhhcCCCCCCCEEEEECCEeC
Q psy12206 144 AQVDGRLQVGDKLIAVRNSTR 164 (164)
Q Consensus 144 A~~~G~L~~GD~Il~VNg~~v 164 (164)
+.++| +..|..++++||.++
T Consensus 52 ~~~d~-~~~~~~~~~~ng~~~ 71 (219)
T 2j3t_D 52 GQRDG-IRVGHAVLAINGMDV 71 (219)
T ss_dssp CCCTT-CCTTCEEEEETTEEC
T ss_pred cccCC-ccccceeeecCCccC
Confidence 56778 999999999999875
Done!