Query psy12207
Match_columns 69
No_of_seqs 132 out of 1132
Neff 7.5
Searched_HMMs 29240
Date Fri Aug 16 21:34:42 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12207.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12207hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4amh_A Disks large homolog 1; 99.6 2.7E-15 9.4E-20 86.2 7.2 58 3-60 13-70 (106)
2 2fe5_A Presynaptic protein SAP 99.5 3.5E-14 1.2E-18 79.3 7.3 58 3-60 14-71 (94)
3 2awx_A Synapse associated prot 99.5 3.7E-14 1.3E-18 81.0 7.1 58 3-60 14-71 (105)
4 2i1n_A Discs, large homolog 3; 99.5 7.4E-14 2.5E-18 79.1 7.6 58 3-60 15-72 (102)
5 2byg_A Channel associated prot 99.5 6.7E-14 2.3E-18 81.7 7.3 58 3-60 35-92 (117)
6 3b76_A E3 ubiquitin-protein li 99.5 1.6E-13 5.5E-18 80.5 6.9 56 3-60 36-91 (118)
7 2jik_A Synaptojanin-2 binding 99.5 2.6E-13 8.8E-18 76.7 7.3 58 3-60 18-75 (101)
8 1ujd_A KIAA0559 protein; PDZ d 99.5 1.3E-13 4.3E-18 80.3 5.8 58 3-60 30-87 (117)
9 2eno_A Synaptojanin-2-binding 99.4 6.9E-13 2.3E-17 77.2 8.3 58 3-60 28-85 (120)
10 1wi4_A Synip, syntaxin binding 99.4 2.4E-13 8.2E-18 78.5 5.9 55 3-60 25-79 (109)
11 3cbz_A Dishevelled-2; PDZ doma 99.4 4.2E-13 1.4E-17 77.2 6.7 55 3-60 17-71 (108)
12 1mfg_A ERB-B2 interacting prot 99.4 8.7E-13 3E-17 73.8 7.7 55 4-60 14-71 (95)
13 3gge_A PDZ domain-containing p 99.4 5.1E-13 1.8E-17 76.5 6.8 58 3-67 16-79 (95)
14 1d5g_A Human phosphatase HPTP1 99.4 7.5E-13 2.6E-17 74.1 7.4 56 3-60 16-71 (96)
15 2q9v_A Membrane-associated gua 99.4 7.4E-13 2.5E-17 73.4 7.0 53 3-60 13-65 (90)
16 3gsl_A Disks large homolog 4; 99.4 7.1E-13 2.4E-17 81.3 7.5 58 3-60 16-73 (196)
17 2d92_A INAD-like protein; PDZ 99.4 2.9E-13 9.9E-18 77.7 5.4 57 3-60 26-82 (108)
18 1wfg_A Regulating synaptic mem 99.4 3.7E-13 1.3E-17 79.9 5.9 56 3-60 48-103 (131)
19 1wf8_A Neurabin-I; PDZ domain, 99.4 3.2E-13 1.1E-17 77.2 5.0 58 3-60 20-78 (107)
20 2qbw_A PDZ-fibronectin fusion 99.4 1.4E-12 4.9E-17 80.5 7.9 56 3-60 2-60 (195)
21 2jre_A C60-1 PDZ domain peptid 99.4 1.2E-12 4E-17 74.8 6.8 58 3-60 25-82 (108)
22 3axa_A Afadin, nectin-3, prote 99.4 6.8E-13 2.3E-17 75.6 5.7 56 3-60 21-76 (106)
23 2ehr_A INAD-like protein; PDZ 99.4 1.7E-12 5.7E-17 75.2 7.4 58 3-60 27-88 (117)
24 1i16_A Interleukin 16, LCF; cy 99.4 4.3E-13 1.5E-17 79.4 4.8 56 3-60 40-95 (130)
25 1wha_A KIAA0147 protein, scrib 99.4 9.5E-13 3.3E-17 75.0 6.0 58 3-60 18-76 (105)
26 3egg_C Spinophilin; PP1, serin 99.4 1.3E-12 4.6E-17 80.8 7.1 58 3-60 91-149 (170)
27 1ufx_A KIAA1526 protein; PDZ d 99.4 5.6E-13 1.9E-17 76.3 4.9 54 3-60 17-70 (103)
28 3hpk_A Protein interacting wit 99.4 1.7E-12 5.9E-17 76.0 6.9 53 3-60 31-83 (125)
29 1rgw_A ZAsp protein; PDZ, cyph 99.4 7.8E-13 2.7E-17 72.5 5.1 52 3-60 11-62 (85)
30 1uep_A Membrane associated gua 99.4 1.6E-12 5.6E-17 73.9 6.5 53 3-60 20-72 (103)
31 2fne_A Multiple PDZ domain pro 99.4 4.3E-13 1.5E-17 78.3 4.2 56 3-60 36-91 (117)
32 2i04_A Membrane-associated gua 99.4 2.3E-12 8E-17 70.7 6.9 52 3-59 11-62 (85)
33 2q3g_A PDZ and LIM domain prot 99.4 8.4E-13 2.9E-17 73.1 5.1 52 3-60 13-64 (89)
34 2uzc_A Human pdlim5, PDZ and L 99.4 1.4E-12 4.8E-17 72.0 5.9 51 3-59 13-63 (88)
35 1um1_A KIAA1849 protein, RSGI 99.4 1.8E-12 6E-17 74.3 6.5 56 3-60 19-74 (110)
36 3sfj_A TAX1-binding protein 3; 99.4 2.5E-12 8.5E-17 72.9 7.0 55 4-59 20-81 (104)
37 1uhp_A Hypothetical protein KI 99.4 3.5E-12 1.2E-16 72.8 7.5 58 3-60 19-79 (107)
38 2iwo_A Multiple PDZ domain pro 99.4 5.4E-13 1.8E-17 78.2 4.0 56 3-60 36-91 (120)
39 4e34_A Golgi-associated PDZ an 99.4 1.2E-12 4E-17 72.1 5.2 52 3-60 14-66 (87)
40 2g5m_B Neurabin-2; spinophilin 99.4 1.4E-12 4.9E-17 75.0 5.8 56 3-60 15-73 (113)
41 2pa1_A PDZ and LIM domain prot 99.4 1.6E-12 5.4E-17 71.7 5.7 51 3-59 12-62 (87)
42 2w4f_A Protein LAP4; structura 99.4 3.1E-12 1.1E-16 71.6 6.9 57 3-60 14-71 (97)
43 3nfk_A Tyrosine-protein phosph 99.4 1.8E-12 6.2E-17 73.9 5.9 53 3-60 29-82 (107)
44 1q7x_A PDZ2B domain of PTP-BAS 99.3 1.9E-12 6.6E-17 73.9 6.0 56 3-60 20-80 (108)
45 1uju_A Scribble; PDZ domain, c 99.3 7.2E-13 2.5E-17 76.2 4.2 58 3-60 21-82 (111)
46 1qav_A Alpha-1 syntrophin (res 99.3 1.5E-12 5E-17 72.2 5.2 53 3-60 16-68 (90)
47 2pkt_A PDZ and LIM domain prot 99.3 2.3E-12 8E-17 71.5 5.9 51 3-59 13-63 (91)
48 2vwr_A Ligand of NUMB protein 99.3 4.2E-12 1.4E-16 71.0 6.9 52 3-60 16-67 (95)
49 2jil_A GRIP1 protein, glutamat 99.3 2.8E-12 9.5E-17 71.9 6.1 57 3-60 14-70 (97)
50 1ihj_A INAD; intermolecular di 99.3 2E-12 6.9E-17 72.6 5.4 58 3-60 17-75 (98)
51 1n7t_A 99-MER peptide of densi 99.3 2.3E-12 8E-17 73.1 5.5 55 4-60 22-79 (103)
52 2qg1_A Multiple PDZ domain pro 99.3 4.8E-12 1.6E-16 70.3 6.6 52 3-60 16-67 (92)
53 2dkr_A LIN-7 homolog B; LIN-7B 99.3 4.1E-12 1.4E-16 70.6 6.3 53 3-60 16-68 (93)
54 1x6d_A Interleukin-16; PDZ dom 99.3 1.9E-12 6.6E-17 75.1 5.1 54 3-60 27-80 (119)
55 2db5_A INAD-like protein; PDZ 99.3 1.1E-12 3.8E-17 77.1 4.0 56 3-60 37-93 (128)
56 2r4h_A Membrane-associated gua 99.3 5E-12 1.7E-16 72.9 6.7 53 3-60 35-87 (112)
57 2h2b_A Tight junction protein 99.3 8.9E-12 3.1E-16 70.9 7.6 57 3-61 19-76 (107)
58 2opg_A Multiple PDZ domain pro 99.3 7.6E-12 2.6E-16 70.2 7.1 54 3-60 15-68 (98)
59 1g9o_A NHE-RF; PDZ domain, com 99.3 7.4E-12 2.5E-16 69.4 7.0 51 3-60 14-64 (91)
60 1x5q_A LAP4 protein; PDZ domai 99.3 7.9E-12 2.7E-16 71.6 7.3 57 3-60 26-83 (110)
61 2dc2_A GOPC, golgi associated 99.3 2.2E-12 7.4E-17 73.5 4.9 52 3-60 21-73 (103)
62 2dmz_A INAD-like protein; PDZ 99.3 4.2E-12 1.5E-16 74.6 5.9 58 3-60 27-84 (129)
63 2eeg_A PDZ and LIM domain prot 99.3 2.3E-12 8E-17 72.1 4.6 52 3-60 18-69 (94)
64 1ueq_A Membrane associated gua 99.3 8.6E-12 3E-16 73.0 7.0 53 3-60 30-82 (123)
65 1v6b_A Harmonin isoform A1; st 99.3 5.1E-12 1.8E-16 73.6 6.0 53 3-59 28-80 (118)
66 1wf7_A Enigma homologue protei 99.3 1.5E-12 5E-17 74.0 3.5 52 3-60 15-66 (103)
67 1wg6_A Hypothetical protein (r 99.3 1E-12 3.4E-17 77.6 2.9 57 3-60 37-93 (127)
68 2daz_A INAD-like protein; PDZ 99.3 5.4E-12 1.9E-16 73.8 5.9 54 3-60 36-89 (124)
69 3o46_A Maguk P55 subfamily mem 99.3 1.1E-11 3.8E-16 69.1 6.8 52 3-60 15-66 (93)
70 1m5z_A GRIP, AMPA receptor int 99.3 1.2E-11 4.1E-16 68.5 6.8 51 3-60 19-69 (91)
71 2cs5_A Tyrosine-protein phosph 99.3 4.1E-12 1.4E-16 73.7 5.0 51 4-60 28-80 (119)
72 3l4f_D SH3 and multiple ankyri 99.3 1.2E-11 4E-16 73.5 7.1 57 3-60 39-102 (132)
73 2ego_A General receptor for ph 99.3 1E-11 3.4E-16 69.7 6.3 56 3-59 16-73 (96)
74 2koj_A Partitioning defective 99.3 1.9E-11 6.6E-16 69.9 7.2 55 3-59 22-76 (111)
75 1wi2_A Riken cDNA 2700099C19; 99.3 1.3E-11 4.4E-16 70.2 6.4 52 3-60 27-78 (104)
76 2o2t_A Multiple PDZ domain pro 99.3 2.9E-12 1E-16 74.1 3.7 56 3-60 32-88 (117)
77 3i4w_A Disks large homolog 4; 99.3 1.2E-11 4.1E-16 69.9 6.2 52 3-60 22-73 (104)
78 1n7e_A AMPA receptor interacti 99.3 1.6E-11 5.5E-16 68.9 6.6 52 4-60 17-68 (97)
79 1uez_A KIAA1526 protein; PDZ d 99.3 1.3E-11 4.6E-16 69.7 6.1 52 3-60 21-72 (101)
80 2csj_A TJP2 protein; PDZ domai 99.3 9E-12 3.1E-16 72.2 5.4 56 3-60 26-82 (117)
81 2kpk_A Membrane-associated gua 99.2 9.9E-12 3.4E-16 73.3 5.3 53 3-60 29-81 (129)
82 2iwn_A Multiple PDZ domain pro 99.2 2.9E-11 9.8E-16 67.3 6.7 57 3-60 15-71 (97)
83 1r6j_A Syntenin 1; PDZ, membra 99.2 8.2E-12 2.8E-16 69.5 4.4 44 4-60 17-60 (82)
84 1v62_A KIAA1719 protein; struc 99.2 1.5E-11 5.1E-16 71.5 5.6 54 3-60 27-80 (117)
85 2he4_A Na(+)/H(+) exchange reg 99.2 3.2E-11 1.1E-15 66.8 6.7 50 3-59 15-64 (90)
86 2vz5_A TAX1-binding protein 3; 99.2 3.1E-11 1.1E-15 72.3 7.1 55 4-59 39-100 (139)
87 3gsl_A Disks large homolog 4; 99.2 3E-11 1E-15 74.0 7.1 58 3-60 111-168 (196)
88 2v90_A PDZ domain-containing p 99.2 2.4E-11 8.2E-16 68.0 6.0 53 3-59 14-66 (96)
89 1q3o_A Shank1; PDZ, GKAP, pept 99.2 6.1E-11 2.1E-15 67.8 7.8 57 3-60 19-82 (109)
90 2iwq_A Multiple PDZ domain pro 99.2 4E-11 1.4E-15 70.5 7.1 58 3-60 36-97 (123)
91 1x5n_A Harmonin; PDZ domain, u 99.2 6.1E-11 2.1E-15 68.2 7.7 52 3-60 27-78 (114)
92 2xkx_A Disks large homolog 4; 99.2 2.5E-11 8.7E-16 87.8 7.3 58 3-60 70-127 (721)
93 3r0h_A INAD, inactivation-NO-a 99.2 3.5E-11 1.2E-15 74.7 7.0 55 3-60 29-85 (206)
94 3e17_A Tight junction protein 99.2 3.2E-11 1.1E-15 67.0 6.1 38 23-60 22-59 (88)
95 1wfv_A Membrane associated gua 99.2 5E-12 1.7E-16 71.4 2.8 52 4-60 23-74 (103)
96 2fcf_A Multiple PDZ domain pro 99.2 4.4E-11 1.5E-15 67.5 6.6 57 3-59 16-76 (103)
97 2gzv_A PRKCA-binding protein; 99.2 4.5E-11 1.5E-15 69.4 6.8 50 4-58 37-86 (114)
98 2edp_A Fragment, shroom family 99.2 6.7E-12 2.3E-16 71.1 3.2 51 3-58 21-71 (100)
99 2kom_A Partitioning defective 99.2 6.5E-11 2.2E-15 69.2 7.4 55 3-59 41-95 (121)
100 1vb7_A PDZ and LIM domain 2; P 99.2 5.6E-12 1.9E-16 70.5 2.7 51 3-59 16-66 (94)
101 2la8_A Inactivation-NO-after-p 99.2 2.2E-11 7.6E-16 70.0 5.2 50 3-60 14-63 (106)
102 2djt_A Unnamed protein product 99.2 1.9E-11 6.6E-16 69.2 4.9 55 3-60 22-76 (104)
103 2eeh_A PDZ domain-containing p 99.2 6.2E-11 2.1E-15 66.9 6.9 50 4-59 23-72 (100)
104 2qkv_A Inactivation-NO-after-p 99.2 3.2E-11 1.1E-15 67.8 5.3 50 3-60 20-69 (96)
105 2jxo_A Ezrin-radixin-moesin-bi 99.2 8.3E-11 2.8E-15 65.9 6.9 50 3-59 20-69 (98)
106 2dlu_A INAD-like protein; PDZ 99.2 4.5E-11 1.5E-15 68.5 5.6 51 3-60 26-76 (111)
107 1z87_A Alpha-1-syntrophin; pro 99.2 2.5E-11 8.6E-16 79.7 5.0 53 3-60 89-141 (263)
108 3kzd_A TIAM-1, T-lymphoma inva 99.2 6.5E-11 2.2E-15 67.4 6.1 51 4-59 21-71 (94)
109 2dm8_A INAD-like protein; PDZ 99.2 1.7E-11 5.9E-16 70.6 3.7 54 3-60 28-81 (116)
110 1nf3_C PAR-6B; semi-CRIB motif 99.2 1.8E-11 6.2E-16 72.1 3.8 58 3-60 42-103 (128)
111 1uew_A Membrane associated gua 99.2 8.9E-11 3.1E-15 67.7 6.6 56 3-59 22-80 (114)
112 3k1r_A Harmonin; protein-prote 99.2 3.6E-11 1.2E-15 74.9 5.1 52 3-60 96-147 (192)
113 1kwa_A Hcask/LIN-2 protein; PD 99.2 8.7E-11 3E-15 65.2 5.9 50 3-60 13-63 (88)
114 3r68_A Na(+)/H(+) exchange reg 99.2 4.8E-11 1.6E-15 66.4 4.8 50 3-59 16-65 (95)
115 3qe1_A Sorting nexin-27, G pro 99.2 1.5E-10 5.1E-15 65.8 6.9 57 3-60 17-80 (107)
116 2ejy_A 55 kDa erythrocyte memb 99.1 1.1E-10 3.9E-15 66.4 6.3 49 4-59 25-73 (97)
117 1v5l_A PDZ and LIM domain 3; a 99.1 1.6E-11 5.5E-16 69.7 2.6 51 3-59 15-65 (103)
118 1tp5_A Presynaptic density pro 99.1 8.6E-11 2.9E-15 68.0 5.6 52 3-60 25-76 (119)
119 2qt5_A Glutamate receptor-inte 99.1 1.3E-10 4.6E-15 72.1 6.7 53 3-60 19-71 (200)
120 3tsv_A Tight junction protein 99.1 1.5E-10 5.3E-15 68.0 6.4 49 3-59 39-87 (124)
121 1uf1_A KIAA1526 protein; PDZ d 99.1 1.5E-10 5.2E-15 67.8 6.3 52 3-60 32-83 (128)
122 2lob_A Golgi-associated PDZ an 98.7 5.7E-12 2E-16 73.1 0.0 52 3-60 39-91 (112)
123 1v5q_A GRIP1 homolog, glutamat 99.1 2.5E-10 8.5E-15 66.6 7.0 56 3-59 27-82 (122)
124 3ngh_A PDZ domain-containing p 99.1 1.5E-10 5.1E-15 65.7 5.9 50 3-59 13-62 (106)
125 2dls_A PDZ-rhogef, RHO guanine 99.1 2.1E-10 7.2E-15 64.0 6.3 48 3-60 19-66 (93)
126 3khf_A Microtubule-associated 99.1 1.3E-10 4.4E-15 65.3 5.4 57 3-60 13-71 (99)
127 2d90_A PDZ domain containing p 99.1 1.5E-10 5.1E-15 65.4 5.7 50 3-59 17-66 (102)
128 2e7k_A Maguk P55 subfamily mem 99.1 1.4E-10 4.9E-15 64.7 5.5 45 3-55 18-62 (91)
129 2vsp_A PDZ domain-containing p 99.1 3.7E-11 1.3E-15 66.7 3.0 49 4-59 15-63 (91)
130 1uit_A Human discs large 5 pro 99.1 2E-10 6.7E-15 66.4 5.8 51 3-61 30-80 (117)
131 2yt7_A Amyloid beta A4 precurs 99.1 4.4E-10 1.5E-14 63.6 7.1 55 3-60 21-75 (101)
132 2eei_A PDZ domain-containing p 99.1 7.5E-11 2.6E-15 67.0 3.6 51 3-60 19-69 (106)
133 2f5y_A Regulator of G-protein 99.1 3E-10 1E-14 63.0 5.9 48 3-60 14-61 (91)
134 1y7n_A Amyloid beta A4 precurs 99.1 4.1E-10 1.4E-14 63.0 6.4 45 3-60 24-68 (90)
135 2z17_A Pleckstrin homology SEC 99.1 2E-10 6.9E-15 65.1 5.1 57 3-60 27-85 (104)
136 1va8_A Maguk P55 subfamily mem 99.1 4.7E-10 1.6E-14 64.6 6.6 48 4-59 38-85 (113)
137 2edz_A PDZ domain-containing p 99.1 2.1E-10 7.3E-15 66.1 5.0 50 3-59 25-74 (114)
138 1p1d_A PDZ45, glutamate recept 99.1 3.9E-10 1.3E-14 69.9 6.3 55 3-58 18-72 (196)
139 2kjd_A Sodium/hydrogen exchang 99.0 7.2E-10 2.5E-14 64.7 6.8 50 3-59 20-69 (128)
140 1wh1_A KIAA1095 protein; PDZ d 99.0 4.6E-10 1.6E-14 65.6 5.8 54 4-60 33-86 (124)
141 1um7_A Synapse-associated prot 99.0 1.1E-10 3.8E-15 66.7 2.2 51 4-60 27-77 (113)
142 2kv8_A RGS12, regulator of G-p 99.0 1.7E-10 5.9E-15 62.9 2.6 36 23-59 24-59 (83)
143 1qau_A Neuronal nitric oxide s 99.0 1.9E-09 6.4E-14 61.6 6.9 51 3-59 13-63 (112)
144 3cyy_A Tight junction protein 99.0 1.8E-09 6.1E-14 59.5 6.5 37 23-59 24-60 (92)
145 2rcz_A Tight junction protein 99.0 1.7E-09 5.7E-14 58.1 6.2 37 23-59 22-58 (81)
146 2eaq_A LIM domain only protein 99.0 1.1E-09 3.7E-14 60.4 5.3 48 4-60 18-67 (90)
147 2yuy_A RHO GTPase activating p 99.0 1.2E-10 3.9E-15 68.4 1.3 39 21-60 60-98 (126)
148 2vsv_A Rhophilin-2; scaffold p 99.0 2.1E-09 7.2E-14 62.2 6.4 46 3-58 34-79 (109)
149 3bpu_A Membrane-associated gua 99.0 2.1E-09 7.1E-14 59.1 6.2 48 3-59 14-61 (88)
150 2d8i_A T-cell lymphoma invasio 99.0 2.9E-10 1E-14 66.3 2.8 51 4-59 30-80 (114)
151 1wif_A RSGI RUH-020, riken cDN 98.9 3.6E-10 1.2E-14 67.1 2.9 48 3-58 38-85 (126)
152 3r0h_A INAD, inactivation-NO-a 98.9 1.2E-09 4.1E-14 67.7 5.3 50 3-60 125-174 (206)
153 2xkx_A Disks large homolog 4; 98.9 1.7E-09 5.8E-14 78.3 6.8 58 3-60 165-222 (721)
154 3shw_A Tight junction protein 98.9 1.6E-09 5.6E-14 75.8 5.9 50 3-60 11-60 (468)
155 3tsz_A Tight junction protein 98.9 1.9E-09 6.4E-14 73.8 5.8 50 3-60 19-68 (391)
156 2qt5_A Glutamate receptor-inte 98.9 3.8E-09 1.3E-13 65.4 6.4 55 4-59 118-172 (200)
157 1whd_A RGS3, regulator of G-pr 98.9 6.9E-10 2.4E-14 62.6 2.0 37 22-59 36-72 (100)
158 2edv_A FERM and PDZ domain-con 98.9 4.2E-10 1.4E-14 63.2 1.0 46 4-60 22-67 (96)
159 1w9e_A Syntenin 1; cell adhesi 98.8 7.8E-09 2.7E-13 62.6 6.2 48 4-60 17-64 (166)
160 3soe_A Membrane-associated gua 98.8 1.2E-08 4.1E-13 59.7 6.4 47 3-60 23-69 (113)
161 3qik_A Phosphatidylinositol 3, 98.8 1E-08 3.4E-13 59.2 5.8 45 3-56 28-72 (101)
162 1b8q_A Protein (neuronal nitri 98.8 3.7E-09 1.3E-13 61.7 2.8 51 3-59 20-70 (127)
163 1vae_A Rhophilin 2, rhophilin, 98.8 2.7E-09 9.2E-14 61.7 2.0 35 23-58 37-71 (111)
164 3rle_A Golgi reassembly-stacki 98.7 1E-08 3.4E-13 64.5 4.7 39 22-61 16-55 (209)
165 3suz_A Amyloid beta A4 precurs 98.7 4.2E-09 1.4E-13 71.7 3.1 55 3-60 216-270 (388)
166 2krg_A Na(+)/H(+) exchange reg 98.7 8.2E-09 2.8E-13 65.9 4.2 50 3-59 20-69 (216)
167 1p1d_A PDZ45, glutamate recept 98.7 2.6E-08 9.1E-13 61.6 6.2 52 4-58 120-171 (196)
168 1ujv_A Membrane associated gua 98.7 5E-08 1.7E-12 54.7 6.4 47 3-60 21-67 (96)
169 2yub_A LIMK-2, LIM domain kina 98.7 7.1E-09 2.4E-13 60.5 2.9 52 4-58 28-81 (118)
170 2pzd_A Serine protease HTRA2; 98.7 1.6E-08 5.5E-13 57.8 4.2 40 21-61 34-73 (113)
171 2p3w_A Probable serine proteas 98.7 2.5E-08 8.7E-13 57.0 4.2 40 21-61 34-73 (112)
172 3i18_A LMO2051 protein; alpha- 98.7 3.1E-08 1.1E-12 55.9 4.5 39 21-61 6-44 (100)
173 2kl1_A YLBL protein; structure 98.6 1E-08 3.5E-13 57.5 2.0 39 21-61 4-42 (94)
174 2l97_A HTRA, putative serine p 98.6 4.5E-08 1.5E-12 58.0 4.5 40 21-62 56-95 (134)
175 2kjp_A Uncharacterized protein 98.6 6.5E-09 2.2E-13 58.2 -0.2 37 23-61 2-38 (91)
176 2i6v_A General secretion pathw 98.6 2.9E-08 9.9E-13 54.7 2.4 38 23-61 20-57 (87)
177 3id1_A Regulator of sigma E pr 98.6 4.8E-08 1.6E-12 54.8 3.3 38 24-62 4-41 (95)
178 2zpm_A Regulator of sigma E pr 98.5 3.6E-08 1.2E-12 54.3 1.8 38 23-61 5-42 (91)
179 2i4s_A General secretion pathw 98.4 2.2E-07 7.5E-12 52.7 3.6 39 23-62 38-76 (105)
180 3stj_A Protease DEGQ; serine p 98.4 2.1E-07 7.3E-12 62.5 3.7 41 21-62 262-302 (345)
181 1te0_A Protease DEGS; two doma 98.4 3.1E-07 1.1E-11 60.7 4.3 40 21-61 243-282 (318)
182 4a8c_A Periplasmic PH-dependen 98.4 6.2E-07 2.1E-11 61.7 5.8 41 21-62 362-402 (436)
183 2hga_A Conserved protein MTH13 98.4 6.2E-07 2.1E-11 52.8 4.9 41 20-62 23-63 (125)
184 1lcy_A HTRA2 serine protease; 98.4 3.7E-07 1.3E-11 60.6 4.3 41 21-62 255-295 (325)
185 1w9e_A Syntenin 1; cell adhesi 98.3 1.1E-06 3.8E-11 53.0 5.8 35 25-60 110-144 (166)
186 3rle_A Golgi reassembly-stacki 98.3 5.2E-07 1.8E-11 56.6 4.4 39 22-62 112-151 (209)
187 1y8t_A Hypothetical protein RV 98.3 4.1E-07 1.4E-11 60.1 4.0 40 21-61 241-280 (324)
188 4a8c_A Periplasmic PH-dependen 98.3 6E-07 2.1E-11 61.8 4.5 41 21-62 262-302 (436)
189 3pv2_A DEGQ; trypsin fold, PDZ 98.3 7.4E-07 2.5E-11 61.7 4.1 40 22-62 282-321 (451)
190 3k50_A Putative S41 protease; 98.3 2.1E-06 7.3E-11 59.0 6.2 36 23-59 91-126 (403)
191 3suz_A Amyloid beta A4 precurs 98.3 1.2E-07 4.1E-12 64.6 0.0 35 25-60 318-352 (388)
192 1fc6_A Photosystem II D1 prote 98.2 1.2E-06 4.1E-11 59.3 4.8 38 21-59 98-135 (388)
193 3qo6_A Protease DO-like 1, chl 98.2 1.2E-06 4.2E-11 58.5 4.6 40 22-62 251-301 (348)
194 4fgm_A Aminopeptidase N family 98.2 2.6E-06 9E-11 60.9 5.7 34 22-56 496-529 (597)
195 3pv2_A DEGQ; trypsin fold, PDZ 98.1 1.5E-06 5E-11 60.3 3.6 40 22-62 386-425 (451)
196 3num_A Serine protease HTRA1; 98.1 3.4E-07 1.2E-11 60.8 0.0 40 22-62 254-293 (332)
197 1ky9_A Protease DO, DEGP, HTRA 97.9 1.6E-06 5.6E-11 60.0 0.7 40 22-62 286-325 (448)
198 1ky9_A Protease DO, DEGP, HTRA 97.7 3.8E-06 1.3E-10 58.1 0.0 40 22-62 383-422 (448)
199 4fln_A Protease DO-like 2, chl 97.6 0.00013 4.4E-09 52.0 5.7 38 21-60 276-313 (539)
200 1k32_A Tricorn protease; prote 97.5 7.6E-05 2.6E-09 54.8 3.5 39 21-60 747-794 (1045)
201 4fln_A Protease DO-like 2, chl 97.4 0.00022 7.4E-09 50.8 4.9 44 19-63 412-455 (539)
202 3dor_A Protein CT_858, CPAF; m 73.4 5.3 0.00018 28.9 4.5 30 23-57 97-126 (583)
203 2j3t_D Trafficking protein par 42.2 26 0.0009 22.2 3.2 23 35-58 52-74 (219)
204 3c9u_A Thiamine monophosphate 39.1 8.2 0.00028 25.5 0.5 48 2-51 144-191 (342)
205 1efp_A ETF, protein (electron 38.9 57 0.002 21.3 4.6 33 20-53 247-279 (307)
206 1efv_A Electron transfer flavo 37.9 59 0.002 21.3 4.6 33 20-53 252-284 (315)
207 2yyd_A Selenide, water dikinas 33.9 13 0.00044 24.5 0.9 49 2-51 130-179 (345)
208 2b25_A Hypothetical protein; s 30.8 40 0.0014 21.5 2.8 22 32-53 1-22 (336)
209 1vc3_B L-aspartate-alpha-decar 29.8 21 0.00073 19.9 1.2 18 32-51 48-65 (96)
210 1uhe_A Aspartate 1-decarboxyla 28.6 22 0.00074 19.9 1.1 18 32-51 46-63 (97)
211 1pqh_A Aspartate 1-decarboxyla 28.2 39 0.0013 20.1 2.2 20 30-51 87-106 (143)
212 3mcq_A Thiamine-monophosphate 28.1 17 0.00058 23.6 0.6 47 2-50 108-155 (319)
213 3plx_B Aspartate 1-decarboxyla 28.0 23 0.00077 20.0 1.1 18 32-51 47-64 (102)
214 2z1e_A Hydrogenase expression/ 27.6 24 0.00081 22.9 1.3 46 2-50 121-170 (338)
215 3bbo_O Ribosomal protein L16; 27.1 48 0.0017 19.3 2.5 24 32-55 88-111 (135)
216 2yxz_A Thiamin-monophosphate k 26.0 22 0.00076 22.7 0.9 47 2-51 112-158 (311)
217 1o97_D Electron transferring f 25.6 72 0.0025 20.9 3.4 33 20-53 257-290 (320)
218 3fd5_A Selenide, water dikinas 24.1 17 0.00058 24.5 0.1 49 2-51 154-203 (394)
219 2zod_A Selenide, water dikinas 22.9 26 0.00091 22.8 0.9 47 2-49 130-177 (345)
220 3oug_A Aspartate 1-decarboxyla 22.6 33 0.0011 19.7 1.1 18 32-51 75-92 (114)
221 3pjy_A Hypothetical signal pep 22.0 31 0.0011 20.0 0.9 24 23-48 102-125 (136)
222 3u0o_A Selenide, water dikinas 21.8 19 0.00064 23.7 -0.1 49 2-51 129-178 (347)
No 1
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.60 E-value=2.7e-15 Score=86.18 Aligned_cols=58 Identities=57% Similarity=0.934 Sum_probs=53.7
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||+++||++.+..+.+.+++|.+|.++|||+++|+|++||+|++|||+++.+.+.
T Consensus 13 ~~~Gf~i~gG~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~ 70 (106)
T 4amh_A 13 KGLGFSIAGGVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTH 70 (106)
T ss_dssp CCSCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCH
T ss_pred CccCEEEEeccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCH
Confidence 4699999999999887778899999999999999999999999999999999988665
No 2
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.53 E-value=3.5e-14 Score=79.26 Aligned_cols=58 Identities=60% Similarity=0.992 Sum_probs=53.0
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.||.+.+..+.+.+++|..+.+++||+++|+|++||+|++|||+++.+.+.
T Consensus 14 ~g~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~ 71 (94)
T 2fe5_A 14 KGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRH 71 (94)
T ss_dssp TCSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBH
T ss_pred CCCCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 4699999999998777777899999999999999999999999999999999998754
No 3
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.53 E-value=3.7e-14 Score=80.95 Aligned_cols=58 Identities=57% Similarity=0.956 Sum_probs=52.7
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.||.+.+..+.+.+++|.+|.++|||+++|+|++||+|++|||+++.+.+.
T Consensus 14 ~glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~ 71 (105)
T 2awx_A 14 KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTH 71 (105)
T ss_dssp TBSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBH
T ss_pred CCCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCH
Confidence 4799999999987766667799999999999999999999999999999999988765
No 4
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.51 E-value=7.4e-14 Score=79.11 Aligned_cols=58 Identities=47% Similarity=0.743 Sum_probs=52.7
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.+|.+.+..+.+.+++|..+.++|||+++|+|++||+|++|||+++.+.+.
T Consensus 15 ~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~ 72 (102)
T 2i1n_A 15 SGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVH 72 (102)
T ss_dssp TBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCH
T ss_pred CcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCH
Confidence 4799999999987766667799999999999999999999999999999999988665
No 5
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.51 E-value=6.7e-14 Score=81.71 Aligned_cols=58 Identities=62% Similarity=0.980 Sum_probs=52.6
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.||.+.+..+.+.+++|.+|.++|||+++|+|++||+|++|||+++.+++.
T Consensus 35 ~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~ 92 (117)
T 2byg_A 35 KGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTH 92 (117)
T ss_dssp TBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCH
T ss_pred CCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 4799999999987766667799999999999999999999999999999999997665
No 6
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.47 E-value=1.6e-13 Score=80.45 Aligned_cols=56 Identities=29% Similarity=0.447 Sum_probs=49.8
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.||.+... .+.+++|+++.++|||+++|+|++||+|++|||+++.+++.
T Consensus 36 ~~lGf~i~gg~~~~~--~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~ 91 (118)
T 3b76_A 36 ESLGMTVAGGASHRE--WDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSR 91 (118)
T ss_dssp CCCCEEEEECSCSTT--CCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCH
T ss_pred CccCEEEecCCCCCC--CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCH
Confidence 579999999987533 45689999999999999999999999999999999997765
No 7
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.46 E-value=2.6e-13 Score=76.73 Aligned_cols=58 Identities=40% Similarity=0.661 Sum_probs=51.8
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.+|.+.+..+.+.+++|..|.+++||+++|+|++||+|++|||+++.+.+.
T Consensus 18 ~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~ 75 (101)
T 2jik_A 18 SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLH 75 (101)
T ss_dssp TCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCH
T ss_pred CCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCH
Confidence 4799999999987655556799999999999999999999999999999999998754
No 8
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.45 E-value=1.3e-13 Score=80.27 Aligned_cols=58 Identities=24% Similarity=0.379 Sum_probs=51.5
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.|+.+.+....+.+++|.+|.+++||+++|+|++||+|++|||+++.+++.
T Consensus 30 ~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~ 87 (117)
T 1ujd_A 30 NGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTY 87 (117)
T ss_dssp CSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCH
T ss_pred CcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCH
Confidence 4699999999876654455689999999999999999999999999999999998765
No 9
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.44 E-value=6.9e-13 Score=77.25 Aligned_cols=58 Identities=40% Similarity=0.661 Sum_probs=52.2
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.+|.+.+......+++|..|.+++||+++|+|++||+|++||++++.+.++
T Consensus 28 ~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~ 85 (120)
T 2eno_A 28 SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLH 85 (120)
T ss_dssp SSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCH
T ss_pred CCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCH
Confidence 4799999999987655556799999999999999999999999999999999999873
No 10
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.43 E-value=2.4e-13 Score=78.48 Aligned_cols=55 Identities=25% Similarity=0.489 Sum_probs=49.0
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.||.+... ..+++|.++.+++||+++|+|++||+|++|||+++.+++.
T Consensus 25 ~glG~~i~gg~~~~~---~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~ 79 (109)
T 1wi4_A 25 TGLGLKILGGINRNE---GPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSF 79 (109)
T ss_dssp SCCCEEEEECSSSSS---CSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCH
T ss_pred CccCEEEEeccCCCC---CCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCH
Confidence 479999999988654 2379999999999999999999999999999999998764
No 11
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.43 E-value=4.2e-13 Score=77.17 Aligned_cols=55 Identities=35% Similarity=0.572 Sum_probs=48.6
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.|+.+.+ .+.+++|.+|.+++||+++|+|++||+|++|||+++.+++.
T Consensus 17 ~~lG~~i~g~~~~~---~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~ 71 (108)
T 3cbz_A 17 NFLGISIVGQSNER---GDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSN 71 (108)
T ss_dssp CCCCEEEEEECSST---TCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCH
T ss_pred CccCEEEEcCcCCC---CCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCH
Confidence 47999999987642 34699999999999999999999999999999999999654
No 12
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=99.43 E-value=8.7e-13 Score=73.80 Aligned_cols=55 Identities=35% Similarity=0.555 Sum_probs=48.5
Q ss_pred cCceEEecCCC---CCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 4 APIYNIAGGIG---NQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 4 ~lG~~i~GG~~---~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
.|||++.||.+ .+..+.+.+++|.+|.+++||++ | |++||+|++||++++.+.+.
T Consensus 14 ~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~ 71 (95)
T 1mfg_A 14 ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEH 71 (95)
T ss_dssp SCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCBH
T ss_pred CCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-C-CCCCCEEEEECCEEcCCCCH
Confidence 69999999885 45555667999999999999999 7 99999999999999998765
No 13
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.43 E-value=5.1e-13 Score=76.51 Aligned_cols=58 Identities=17% Similarity=0.222 Sum_probs=49.6
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc------ccccccC
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT------LGYCETG 67 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~------~~~~~~~ 67 (69)
..|||+|.++ + ...+||+++.++|+|++.++|++||+|++|||+++.++++ |+++..|
T Consensus 16 ~~LG~tI~~~-g------~g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g 79 (95)
T 3gge_A 16 DSLGLTITDN-G------VGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKKE 79 (95)
T ss_dssp SCCCEEEECS-S------SSCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTT
T ss_pred CCceEEEEcC-C------CCcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCC
Confidence 5799999964 1 1258999999999999999999999999999999999887 6666554
No 14
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.42 E-value=7.5e-13 Score=74.10 Aligned_cols=56 Identities=29% Similarity=0.555 Sum_probs=49.1
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.+|.+... .+.+++|..+.++|||+++|+|++||+|++|||+++.+.+.
T Consensus 16 ~~lG~~i~~g~~~~~--~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~ 71 (96)
T 1d5g_A 16 NSLGISVTGGVNTSV--RHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATH 71 (96)
T ss_dssp SSCCEEEECCSSSCS--SSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCH
T ss_pred CCCCEEEECCCCCCC--CcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 479999999987653 34589999999999999999999999999999999997654
No 15
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.42 E-value=7.4e-13 Score=73.36 Aligned_cols=53 Identities=36% Similarity=0.505 Sum_probs=47.1
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.+|.+... +++|..|.++|||+++|+|++||+|++|||+++.+.+.
T Consensus 13 ~g~G~~~~~g~~~~~-----~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~ 65 (90)
T 2q9v_A 13 TGFGFRILGGNEPGE-----PIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSH 65 (90)
T ss_dssp TBCCEEEEECSSTTS-----CEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCH
T ss_pred CccCEEEEccccCCC-----CEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCH
Confidence 468999999876543 79999999999999999999999999999999977654
No 16
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.42 E-value=7.1e-13 Score=81.27 Aligned_cols=58 Identities=41% Similarity=0.639 Sum_probs=53.2
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.+|.+.+...++.+++|..|.+++||+++|+|++||+|++|||+++.+++.
T Consensus 16 ~~lG~~i~~g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~ 73 (196)
T 3gsl_A 16 SGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTH 73 (196)
T ss_dssp TBSSEEEECCTTSCTTSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCH
T ss_pred CCCCEEEEcccCCcccCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCH
Confidence 4799999999998766667799999999999999999999999999999999998876
No 17
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.42 E-value=2.9e-13 Score=77.70 Aligned_cols=57 Identities=19% Similarity=0.257 Sum_probs=49.3
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.+|.+ +..+.+.+++|.+|.+++||+++|+|++||+|++|||+++.+++.
T Consensus 26 ~glG~~i~~~~~-~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~ 82 (108)
T 2d92_A 26 KGLGFSILDYQD-PLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSL 82 (108)
T ss_dssp SCCSEEEEEEEC-SSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCH
T ss_pred CccCEEEecccc-cCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCH
Confidence 479999999876 223345689999999999999999999999999999999988664
No 18
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.41 E-value=3.7e-13 Score=79.91 Aligned_cols=56 Identities=20% Similarity=0.311 Sum_probs=49.5
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.||..... ++.++||..|.+++||+++|+|++||+|++|||+++.+.+.
T Consensus 48 ~~lG~~i~gg~~~~~--~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~ 103 (131)
T 1wfg_A 48 AMLGLKVVGGKMTES--GRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATF 103 (131)
T ss_dssp TTTTEEEEEEEECSS--SCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCH
T ss_pred CCCCEEEecCccCCC--CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 369999999987654 45589999999999999999999999999999999988754
No 19
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.40 E-value=3.2e-13 Score=77.24 Aligned_cols=58 Identities=33% Similarity=0.496 Sum_probs=48.4
Q ss_pred CcCceEEec-CCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAG-GIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~G-G~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.+ +.+......+.+++|.+|.+++||+++|+|++||+|++|||+++.+++.
T Consensus 20 ~glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~ 78 (107)
T 1wf8_A 20 DGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQ 78 (107)
T ss_dssp TBSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCH
T ss_pred CcccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 479999999 3333322345699999999999999999999999999999999988765
No 20
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=99.39 E-value=1.4e-12 Score=80.54 Aligned_cols=56 Identities=34% Similarity=0.529 Sum_probs=49.6
Q ss_pred CcCceEEecCCC---CCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIG---NQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~---~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
.+|||+|.||.+ .+....+.+++|.+|.+++||++ | |++||+|++|||+++.++++
T Consensus 2 ~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~-g-l~~GD~I~~vng~~v~~~~~ 60 (195)
T 2qbw_A 2 PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEH 60 (195)
T ss_dssp CCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCCH
T ss_pred CcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh-C-CCCCCEEEEECCEECCCCCH
Confidence 579999999874 45555677999999999999999 7 99999999999999998875
No 21
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.39 E-value=1.2e-12 Score=74.79 Aligned_cols=58 Identities=28% Similarity=0.418 Sum_probs=51.0
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.++.+.+....+.+++|..|.+++||+++|+|++||+|++|||+++.+++.
T Consensus 25 ~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~ 82 (108)
T 2jre_A 25 SSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQ 82 (108)
T ss_dssp SCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCH
T ss_pred CCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 4699999999876554556699999999999999999999999999999999998643
No 22
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.39 E-value=6.8e-13 Score=75.65 Aligned_cols=56 Identities=34% Similarity=0.533 Sum_probs=49.0
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.+|.+... ...+++|.+|.++|||+++|+|++||+|++|||+++.+.+.
T Consensus 21 ~glG~~i~~~~~~~~--~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~ 76 (106)
T 3axa_A 21 NGMGLSIVAAKGAGQ--DKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQ 76 (106)
T ss_dssp SSCSEEEEEEECSSC--SSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCH
T ss_pred CccCEEEEeecCCCC--CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 479999999876543 34589999999999999999999999999999999997665
No 23
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.39 E-value=1.7e-12 Score=75.23 Aligned_cols=58 Identities=19% Similarity=0.360 Sum_probs=50.0
Q ss_pred CcCceEEecCCCCCCC----CCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHI----PGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~----~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.||.+.... ....+++|..|.+++||+++|+|++||+|++|||+++.+.+.
T Consensus 27 ~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~ 88 (117)
T 2ehr_A 27 VSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASH 88 (117)
T ss_dssp SCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCH
T ss_pred CccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 5799999999875421 234589999999999999999999999999999999988774
No 24
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.38 E-value=4.3e-13 Score=79.40 Aligned_cols=56 Identities=21% Similarity=0.471 Sum_probs=49.0
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.||.+.+. .+.+++|.+|.+++||+++|.|++||+|++|||+++.++++
T Consensus 40 ~glG~~i~gg~~~~~--~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~ 95 (130)
T 1i16_A 40 AGLGFSLEGGKGSLH--GDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTR 95 (130)
T ss_dssp SSTTEEEECCCCCSS--SCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCH
T ss_pred CccCEEEecCcCCCC--CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 479999999998654 44589999999999999995599999999999999998755
No 25
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.38 E-value=9.5e-13 Score=75.00 Aligned_cols=58 Identities=38% Similarity=0.694 Sum_probs=50.3
Q ss_pred CcCceEEecCCCCCC-CCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQH-IPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~-~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.+|.+.+. ...+.+++|..|.+++||+++|+|++||+|++||++++.+++.
T Consensus 18 ~glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~ 76 (105)
T 1wha_A 18 RGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARH 76 (105)
T ss_dssp TCCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCH
T ss_pred CccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 469999999988532 3445699999999999999999999999999999999998654
No 26
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.38 E-value=1.3e-12 Score=80.85 Aligned_cols=58 Identities=33% Similarity=0.474 Sum_probs=50.0
Q ss_pred CcCceEEec-CCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAG-GIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~G-G~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.+ +.+......+.+++|.+|.+++||+++|+|++||+|++|||+++.+++.
T Consensus 91 ~glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~ 149 (170)
T 3egg_C 91 EGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQ 149 (170)
T ss_dssp TBSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCH
T ss_pred CeEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCH
Confidence 479999999 4454444456699999999999999999999999999999999988876
No 27
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.38 E-value=5.6e-13 Score=76.33 Aligned_cols=54 Identities=24% Similarity=0.321 Sum_probs=47.6
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.||.+... ..++|.++.+++||+++|+|++||+|++|||+++.+++.
T Consensus 17 ~glG~~i~gg~~~~~----~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~ 70 (103)
T 1ufx_A 17 ATLGIAIEGGANTRQ----PLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEH 70 (103)
T ss_dssp SSCCEEEECBTTSSC----SSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBH
T ss_pred CcCCeEEECCCCCCC----CcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCH
Confidence 479999999987643 235999999999999999999999999999999998765
No 28
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.37 E-value=1.7e-12 Score=76.00 Aligned_cols=53 Identities=21% Similarity=0.384 Sum_probs=47.7
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.||.+... +++|.++.++|||+++|+|++||+|++|||+++.+.+.
T Consensus 31 ~~lG~~i~gg~~~~~-----~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~ 83 (125)
T 3hpk_A 31 NLIGISIGGGAQYCP-----CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTK 83 (125)
T ss_dssp SCCCEEEEECSSCCS-----SEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCH
T ss_pred CCcCEEEeccCCCCC-----CEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCH
Confidence 369999999987543 89999999999999999999999999999999997664
No 29
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.37 E-value=7.8e-13 Score=72.49 Aligned_cols=52 Identities=17% Similarity=0.237 Sum_probs=46.7
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.||.+... +++|.+|.+++||+++| |++||+|++|||+++.+.+.
T Consensus 11 ~~~G~~l~gg~~~~~-----~v~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~ 62 (85)
T 1rgw_A 11 GPWGFRLQGGKDFNM-----PLTISRITPGSKAAQSQ-LSQGDLVVAIDGVNTDTMTH 62 (85)
T ss_dssp SCCCEEECCCGGGTS-----CCBEEEECTTSHHHHSS-CCCCSBEEEETTEECTTCCH
T ss_pred CccCEEEEeccCCCC-----CeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCH
Confidence 468999999887654 89999999999999999 99999999999999998853
No 30
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.37 E-value=1.6e-12 Score=73.87 Aligned_cols=53 Identities=28% Similarity=0.391 Sum_probs=47.0
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.+|.+... +++|..|.+++||+++|+|++||+|++|||+++.+.+.
T Consensus 20 ~g~G~~i~~g~~~~~-----~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~ 72 (103)
T 1uep_A 20 SGFGFRILGGDEPGQ-----PILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTH 72 (103)
T ss_dssp SSCCEEECCCCSTTS-----CCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCH
T ss_pred CccCEEEeeecCCCC-----CeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCH
Confidence 468999999886443 89999999999999999999999999999999987653
No 31
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.37 E-value=4.3e-13 Score=78.32 Aligned_cols=56 Identities=39% Similarity=0.629 Sum_probs=48.8
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.+|.+.+. ++.+++|++|.++|||+++|+|++||+|++|||+++.+.+.
T Consensus 36 ~glGf~l~~g~~~~~--~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~ 91 (117)
T 2fne_A 36 DGLGFSIVGGYGSPH--GDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTH 91 (117)
T ss_dssp TBTSEEEEEEEEETT--EEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCH
T ss_pred CcccEEEecccCCCC--CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 479999999987543 34589999999999999999999999999999999997654
No 32
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.37 E-value=2.3e-12 Score=70.65 Aligned_cols=52 Identities=19% Similarity=0.383 Sum_probs=46.3
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~ 59 (69)
..|||++.+|.+.. .+++|..+.+++||+++|+|++||+|++|||+++.+.+
T Consensus 11 ~g~G~~i~~~~~~~-----~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~ 62 (85)
T 2i04_A 11 RGFGFTVVGGDEPD-----EFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHT 62 (85)
T ss_dssp TBSSEEEEECCSTT-----BCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCC
T ss_pred CCCCEEEEcccCCC-----CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCC
Confidence 46899999987643 38999999999999999999999999999999998764
No 33
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.37 E-value=8.4e-13 Score=73.10 Aligned_cols=52 Identities=17% Similarity=0.329 Sum_probs=46.6
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.||.+... +++|..+.+++||+++| |++||+|++|||+++.+.+.
T Consensus 13 ~~~G~~l~gg~~~~~-----~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~ 64 (89)
T 2q3g_A 13 APWGFRLQGGKDFNV-----PLSISRLTPGGKAAQAG-VAVGDWVLSIDGENAGSLTH 64 (89)
T ss_dssp SCCCEEEEEEGGGTE-----EEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCH
T ss_pred CcccEEEECcCCCCC-----CEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 468999999887544 89999999999999999 99999999999999987644
No 34
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.37 E-value=1.4e-12 Score=71.98 Aligned_cols=51 Identities=16% Similarity=0.319 Sum_probs=46.6
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~ 59 (69)
..|||++.+|.+... +++|..+.+++||+++| |++||+|++|||+++.+.+
T Consensus 13 ~~~G~~l~~g~~~~~-----~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~ 63 (88)
T 2uzc_A 13 APWGFRLQGGKDFNM-----PLTISSLKDGGKAAQAN-VRIGDVVLSIDGINAQGMT 63 (88)
T ss_dssp SCCCEEEEEEGGGTE-----EEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCC
T ss_pred CcccEEEECcCCCCC-----CeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCC
Confidence 468999999887554 89999999999999999 9999999999999999885
No 35
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.36 E-value=1.8e-12 Score=74.32 Aligned_cols=56 Identities=25% Similarity=0.490 Sum_probs=49.3
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.+|.+.+. ...+++|..|.+++||+++|+|++||+|++|||+++.+.+.
T Consensus 19 ~glG~~l~~g~~~~~--~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~ 74 (110)
T 1um1_A 19 SGLGMGLIDGMHTHL--GAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGY 74 (110)
T ss_dssp TCCCEEEEETTTSTT--CCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCH
T ss_pred CccCEEEeCCcCCCC--CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 469999999987653 45689999999999999999999999999999999987655
No 36
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=99.36 E-value=2.5e-12 Score=72.87 Aligned_cols=55 Identities=36% Similarity=0.654 Sum_probs=48.2
Q ss_pred cCceEEecCCCCCC-------CCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCc
Q psy12207 4 APIYNIAGGIGNQH-------IPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 4 ~lG~~i~GG~~~~~-------~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~ 59 (69)
.|||++.|+.+... .+...+++|..|.++|||+++| |++||+|++|||+++.+.+
T Consensus 20 ~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~ 81 (104)
T 3sfj_A 20 ILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVT 81 (104)
T ss_dssp ECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCC
T ss_pred cccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCC
Confidence 59999999987532 1345689999999999999999 9999999999999998877
No 37
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.36 E-value=3.5e-12 Score=72.85 Aligned_cols=58 Identities=33% Similarity=0.547 Sum_probs=48.9
Q ss_pred CcCceEEecCCCC---CCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGN---QHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~---~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.|+.+. +......+++|.+|.+++||+++|.|++||+|++||++++.+.+.
T Consensus 19 ~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~ 79 (107)
T 1uhp_A 19 GSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATH 79 (107)
T ss_dssp SCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCH
T ss_pred CccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 4799999999854 233345699999999999999993399999999999999988765
No 38
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.36 E-value=5.4e-13 Score=78.19 Aligned_cols=56 Identities=25% Similarity=0.449 Sum_probs=48.0
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.||.+.+. .+.+++|.+|.++|||+++|.|++||+|++|||+++.+++.
T Consensus 36 ~~lGf~i~gg~~~~~--~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~ 91 (120)
T 2iwo_A 36 DSLGISIAGGVGSPL--GDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTH 91 (120)
T ss_dssp -CCCEEEEEEEEETT--EEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBH
T ss_pred CCCCEEEecccCCCC--CCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCH
Confidence 379999999987543 33489999999999999994499999999999999998765
No 39
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.36 E-value=1.2e-12 Score=72.13 Aligned_cols=52 Identities=27% Similarity=0.383 Sum_probs=46.3
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhc-cCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQV-DGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~-~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.+|.+... +++|.++.++|||++ +| |++||+|++|||+++.+.+.
T Consensus 14 ~~lG~~i~~~~~~~~-----~~~V~~V~~gspA~~~ag-l~~GD~I~~vng~~v~~~~~ 66 (87)
T 4e34_A 14 EGLGISITGGKEHGV-----PILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKH 66 (87)
T ss_dssp BCCCEEEEEEGGGTE-----EEEEEEECTTSHHHHHSC-CCTTEEEEEETTEECTTCCH
T ss_pred CcccEEEEccCCCCC-----CEEEEEECCCCHHHhcCC-CCCCCEEEEECCEECCCCCH
Confidence 479999999876543 899999999999999 57 99999999999999988765
No 40
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.36 E-value=1.4e-12 Score=75.00 Aligned_cols=56 Identities=32% Similarity=0.464 Sum_probs=48.1
Q ss_pred CcCceEEec---CCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAG---GIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~G---G~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.+ |.+.. ....+++|.+|.++|||+++|+|++||+|++|||+++.+++.
T Consensus 15 ~glG~~l~~~~~~~~~~--~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~ 73 (113)
T 2g5m_B 15 EGLGISIIGMGAGADMG--LEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQ 73 (113)
T ss_dssp SCCCCEEEEEECCCCSS--SCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCH
T ss_pred CCCCEEEEecCCCCcCC--CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 479999999 44432 245699999999999999999999999999999999998765
No 41
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.36 E-value=1.6e-12 Score=71.72 Aligned_cols=51 Identities=25% Similarity=0.336 Sum_probs=46.0
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~ 59 (69)
..|||++.+|.+... +++|..|.+++||+++| |++||+|++|||+++.+.+
T Consensus 12 ~~lG~~l~~~~~~~~-----g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~ 62 (87)
T 2pa1_A 12 APWGFRITGGRDFHT-----PIMVTKVAERGKAKDAD-LRPGDIIVAINGESAEGML 62 (87)
T ss_dssp SCCSEEEEEEGGGTE-----EEEEEEECSSSHHHHTT-CCTTCEEEEETTEESTTCC
T ss_pred CccCEEEecccCCCC-----CEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCC
Confidence 468999999887644 89999999999999999 9999999999999999853
No 42
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.35 E-value=3.1e-12 Score=71.56 Aligned_cols=57 Identities=30% Similarity=0.513 Sum_probs=49.5
Q ss_pred CcCceEEecCCCCCC-CCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQH-IPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~-~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.+|.+.+. .....+++|..|.+++||+++| |++||+|++|||+++.+.+.
T Consensus 14 ~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~ 71 (97)
T 2w4f_A 14 GGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEH 71 (97)
T ss_dssp TBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCH
T ss_pred CceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCcCH
Confidence 468999999987532 2345689999999999999999 99999999999999998876
No 43
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.35 E-value=1.8e-12 Score=73.86 Aligned_cols=53 Identities=19% Similarity=0.364 Sum_probs=47.9
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccC-CCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDG-RLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~g-rl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.||.+... +++|..|.+++||+++| ||++||+|++|||+++.+++.
T Consensus 29 ~~~G~~~~gg~~~~~-----~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~ 82 (107)
T 3nfk_A 29 GRFGFNVKGGYDQKM-----PVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTH 82 (107)
T ss_dssp SCCCEEEEEEGGGTE-----EEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCH
T ss_pred CCCCEEEEccCCCCC-----CeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCH
Confidence 579999999987544 89999999999999999 699999999999999998765
No 44
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.35 E-value=1.9e-12 Score=73.93 Aligned_cols=56 Identities=29% Similarity=0.555 Sum_probs=49.1
Q ss_pred CcCceEEe-----cCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIA-----GGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~-----GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++. ||.+... .+.+++|.+|.++|||+++|+|++||+|++|||+++.+.+.
T Consensus 20 ~~lG~~i~~~~~~gg~~~~~--~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~ 80 (108)
T 1q7x_A 20 NSLGISVTVLFDKGGVNTSV--RHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATH 80 (108)
T ss_dssp CSCCEEESSSSSSBCBCTTS--SSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTT
T ss_pred CCccEEEEEeccCCCccccC--CCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCH
Confidence 47999999 8887653 34589999999999999999999999999999999986654
No 45
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.35 E-value=7.2e-13 Score=76.17 Aligned_cols=58 Identities=33% Similarity=0.477 Sum_probs=50.1
Q ss_pred CcCceEEecCCCC----CCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGN----QHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~----~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.+|.+. +......+++|..|.+++||+++|+|++||+|++|||+++.+++.
T Consensus 21 ~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~ 82 (111)
T 1uju_A 21 ERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTH 82 (111)
T ss_dssp CCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCH
T ss_pred CccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 4799999999853 333456689999999999999999999999999999999997655
No 46
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.35 E-value=1.5e-12 Score=72.24 Aligned_cols=53 Identities=30% Similarity=0.375 Sum_probs=46.8
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.++.+... +++|.++.++|||+++|.|++||+|++|||+++.+.+.
T Consensus 16 ~~lG~~i~~~~~~~~-----g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~ 68 (90)
T 1qav_A 16 GGLGISIKGGRENKM-----PILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATH 68 (90)
T ss_dssp TCCCEEEEEEGGGTE-----EEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCH
T ss_pred CCcCEEEEcccCCCC-----CEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCH
Confidence 479999999877543 89999999999999993399999999999999998765
No 47
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.34 E-value=2.3e-12 Score=71.53 Aligned_cols=51 Identities=18% Similarity=0.307 Sum_probs=46.7
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~ 59 (69)
..|||++.+|.+... +++|..|.++|||+++| |++||+|++|||+++.+.+
T Consensus 13 ~~~G~~l~~~~~~~~-----g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~ 63 (91)
T 2pkt_A 13 GPWGFRLVGGKDFEQ-----PLAISRVTPGSKAALAN-LCIGDVITAIDGENTSNMT 63 (91)
T ss_dssp SCCSEEEEEEGGGTE-----EEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCC
T ss_pred CCCCEEEEccCCCCC-----CeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCC
Confidence 468999999877544 89999999999999999 9999999999999999888
No 48
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.34 E-value=4.2e-12 Score=70.97 Aligned_cols=52 Identities=21% Similarity=0.470 Sum_probs=46.3
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.++.+. .+++|.++.++|||+++|+|++||+|++|||+++.+.+.
T Consensus 16 ~~lG~~~~~~~~~------~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~ 67 (95)
T 2vwr_A 16 EQLGIKLVRRTDE------PGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTP 67 (95)
T ss_dssp CCCCEEEEECSSS------CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCH
T ss_pred CcccEEEEeccCC------CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCH
Confidence 3589999987653 389999999999999999999999999999999998765
No 49
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.34 E-value=2.8e-12 Score=71.87 Aligned_cols=57 Identities=21% Similarity=0.371 Sum_probs=48.0
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.++.+... ....+++|..+.++|||+++|+|++||+|++|||+++.+++.
T Consensus 14 ~~lG~~i~~~~~~~~-~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~ 70 (97)
T 2jil_A 14 NTFGFVIRGGAHDDR-NKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTH 70 (97)
T ss_dssp TBCSEEEEEECCSCC---CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCH
T ss_pred CccCEEEeCcccCCC-CCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCH
Confidence 479999999886542 234589999999999999999999999999999999998543
No 50
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.34 E-value=2e-12 Score=72.55 Aligned_cols=58 Identities=22% Similarity=0.367 Sum_probs=49.6
Q ss_pred CcCceEEecCCCCCC-CCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQH-IPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~-~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.+|.+... .+...+++|..+.++|||+++|+|++||+|++|||+++.+.+.
T Consensus 17 ~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~ 75 (98)
T 1ihj_A 17 KSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTE 75 (98)
T ss_dssp SSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCH
T ss_pred CCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 479999999987543 1234589999999999999999999999999999999998754
No 51
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=99.33 E-value=2.3e-12 Score=73.06 Aligned_cols=55 Identities=35% Similarity=0.555 Sum_probs=48.0
Q ss_pred cCceEEecCCC---CCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 4 APIYNIAGGIG---NQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 4 ~lG~~i~GG~~---~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
.|||++.||.+ .+..+.+.+++|.+|.+++||++ | |++||+|++|||+++.+.+.
T Consensus 22 ~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~ 79 (103)
T 1n7t_A 22 ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEH 79 (103)
T ss_dssp CCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-S-CCTTCEEEEETTEECSSCCH
T ss_pred CccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-C-CCCCCEEEEECCEECCCCCH
Confidence 68999999875 44444567999999999999999 7 99999999999999998765
No 52
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.33 E-value=4.8e-12 Score=70.28 Aligned_cols=52 Identities=31% Similarity=0.571 Sum_probs=46.2
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.++.+. .+++|..+.++|||+++|+|++||+|++|||+++.+.+.
T Consensus 16 ~~lG~~~~~~~~~------~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~ 67 (92)
T 2qg1_A 16 KGLGLSIVGKRND------TGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQ 67 (92)
T ss_dssp SCCSEEEECCSSS------CSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCH
T ss_pred CcccEEEEeccCC------CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 5789999987642 389999999999999999999999999999999988754
No 53
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.33 E-value=4.1e-12 Score=70.59 Aligned_cols=53 Identities=30% Similarity=0.552 Sum_probs=46.5
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.++.+... +++|..|.+++||+++|.|++||+|++|||+++.+.+.
T Consensus 16 ~glG~~l~~~~~~~~-----~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~ 68 (93)
T 2dkr_A 16 EGLGFNIMGGKEQNS-----PIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQH 68 (93)
T ss_dssp TCCCEEEECSSSSSC-----CCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCH
T ss_pred CCccEEEecccCCCC-----CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 478999999876543 89999999999999995599999999999999997653
No 54
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.33 E-value=1.9e-12 Score=75.13 Aligned_cols=54 Identities=19% Similarity=0.417 Sum_probs=47.9
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.|+.+.. ..+++|..|.+++||+++|+|++||+|++|||+++.+++.
T Consensus 27 ~~lG~~i~g~~~~~----~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~ 80 (119)
T 1x6d_A 27 AGLGFSLAGGADLE----NKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTH 80 (119)
T ss_dssp SCCSEEEECCSSSS----CSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCH
T ss_pred CccCEEEeCCCCCC----CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 47999999988752 2489999999999999999999999999999999987665
No 55
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.32 E-value=1.1e-12 Score=77.09 Aligned_cols=56 Identities=18% Similarity=0.307 Sum_probs=49.0
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcC-CCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVS-KGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~-~~~~ 60 (69)
..|||++.||.+... .+.+++|..|.+++||+++|+|++||+|++|||+++. +++.
T Consensus 37 ~~lG~~i~g~~~~~~--~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~ 93 (128)
T 2db5_A 37 GGLGFSVVALRSQNL--GKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISH 93 (128)
T ss_dssp SCCCCEEEEEECSSS--SCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCH
T ss_pred CccCEEEecccCCCC--CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCH
Confidence 479999999887653 3458999999999999999999999999999999997 6655
No 56
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.32 E-value=5e-12 Score=72.95 Aligned_cols=53 Identities=19% Similarity=0.466 Sum_probs=47.1
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.++.+... +++|..|.++|||+++|+|++||+|++|||+++.+.+.
T Consensus 35 ~glG~~l~~~~~~~~-----gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~ 87 (112)
T 2r4h_A 35 KGFGFSLRGGREYNM-----DLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKH 87 (112)
T ss_dssp TBTSEEEEECGGGTC-----CEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCH
T ss_pred CccCEEEeccccCCC-----CEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 368999999876443 89999999999999999999999999999999988754
No 57
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=99.32 E-value=8.9e-12 Score=70.94 Aligned_cols=57 Identities=25% Similarity=0.426 Sum_probs=48.8
Q ss_pred CcCceEEecCCCCCC-CCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCccc
Q psy12207 3 IAPIYNIAGGIGNQH-IPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPTL 61 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~-~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~~ 61 (69)
..|||++.++.+.+. .+.+.+++|.++.+++||+ +| |++||+|++|||+++.+.+.+
T Consensus 19 ~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~-ag-l~~GD~I~~vng~~v~~~~~~ 76 (107)
T 2h2b_A 19 FGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE-GQ-LQENDRVAMVNGVSMDNVEHA 76 (107)
T ss_dssp TBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTB-TT-BCTTCEEEEETTEECTTCCHH
T ss_pred CccCEEEecCcCCCcccCCCCCEEEEEECCCCchh-hC-CCCCCEEEEECCEECCCccHH
Confidence 479999999987653 2345699999999999999 87 999999999999999988763
No 58
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.32 E-value=7.6e-12 Score=70.17 Aligned_cols=54 Identities=28% Similarity=0.434 Sum_probs=47.7
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.++.+... .+++|..+.++|||+++|+|++||+|++|||+++.+.+.
T Consensus 15 ~~lG~~l~~~~~~~~----~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~ 68 (98)
T 2opg_A 15 TGLGLSIVGGSDTLL----GAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATH 68 (98)
T ss_dssp TBTCEEEEECTTSTT----CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCH
T ss_pred CcccEEEecCCCCCC----CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCH
Confidence 468999999876542 389999999999999999999999999999999998763
No 59
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.32 E-value=7.4e-12 Score=69.39 Aligned_cols=51 Identities=27% Similarity=0.461 Sum_probs=45.4
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.++.+. .+++|..|.++|||+++| |++||+|++|||+++.+.+.
T Consensus 14 ~g~G~~~~~~~~~------~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~ 64 (91)
T 1g9o_A 14 NGYGFHLHGEKGK------LGQYIRLVEPGSPAEKAG-LLAGDRLVEVNGENVEKETH 64 (91)
T ss_dssp TBCCEEEEECTTC------SSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCH
T ss_pred CcccEEEEecCCC------CCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCH
Confidence 4689999987753 389999999999999999 99999999999999998654
No 60
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.32 E-value=7.9e-12 Score=71.58 Aligned_cols=57 Identities=30% Similarity=0.513 Sum_probs=49.5
Q ss_pred CcCceEEecCCCCCC-CCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQH-IPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~-~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.+|.+... .....+++|..|.+++||+++| |++||+|++|||+++.+.+.
T Consensus 26 ~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~ 83 (110)
T 1x5q_A 26 GGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEH 83 (110)
T ss_dssp SSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCH
T ss_pred CeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCH
Confidence 468999999987532 2345699999999999999999 99999999999999998766
No 61
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.32 E-value=2.2e-12 Score=73.53 Aligned_cols=52 Identities=27% Similarity=0.362 Sum_probs=46.5
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhcc-CCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVD-GRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~-grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.+|.+... +++|.++.++|||+++ | |++||+|++|||+++.+++.
T Consensus 21 ~~lG~~l~~g~~~~~-----~~~V~~V~~~s~A~~a~g-L~~GD~Il~Ing~~v~~~~~ 73 (103)
T 2dc2_A 21 EGLGISITGGKEHGV-----PILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKH 73 (103)
T ss_dssp SCCCEEEEEEGGGTE-----EEEEEEECTTSHHHHHTC-CCSSEEEEEETTEESTTSCH
T ss_pred CccCEEEEeccCCCC-----CEEEEEECCCCHHHHhCC-CCCCCEEEEECCEECCCCCH
Confidence 479999999987543 8999999999999996 6 99999999999999988765
No 62
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.31 E-value=4.2e-12 Score=74.57 Aligned_cols=58 Identities=31% Similarity=0.480 Sum_probs=50.4
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.++.+........+++|..|.+++||+++|+|++||+|++|||+++.+++.
T Consensus 27 ~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~ 84 (129)
T 2dmz_A 27 QSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFAN 84 (129)
T ss_dssp CCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCH
T ss_pred CCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 4799999998876543445699999999999999999999999999999999998544
No 63
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.31 E-value=2.3e-12 Score=72.10 Aligned_cols=52 Identities=15% Similarity=0.230 Sum_probs=46.8
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.||.+... +++|..|.+++||+++| |++||+|++|||+++.+.+.
T Consensus 18 ~~~G~~l~gg~~~~~-----~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~ 69 (94)
T 2eeg_A 18 SPWGFRLVGGRDFSA-----PLTISRVHAGSKAALAA-LCPGDLIQAINGESTELMTH 69 (94)
T ss_dssp SCCSCCEECCTTTTS-----CCEECCCCSSSHHHHTT-CCTTCEEEEETTEETTTCCH
T ss_pred CccCEEEECccCCCC-----CEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 468999999987654 89999999999999999 99999999999999998743
No 64
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.30 E-value=8.6e-12 Score=72.97 Aligned_cols=53 Identities=21% Similarity=0.368 Sum_probs=46.8
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.+|.+.. .+++|..|.+++||+++|+|++||+|++|||+++.+.+.
T Consensus 30 ~glG~~~~~g~~~~-----~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~ 82 (123)
T 1ueq_A 30 MGFGFTIIGGDEPD-----EFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTH 82 (123)
T ss_dssp TSCSEEEECCSSSS-----CCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCH
T ss_pred CceeEEEecccCCC-----CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCH
Confidence 46899999987643 389999999999999999999999999999999987653
No 65
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.30 E-value=5.1e-12 Score=73.65 Aligned_cols=53 Identities=23% Similarity=0.421 Sum_probs=46.7
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~ 59 (69)
..|||++.||.+... .+++|.+|.++|||+++|.|++||+|++|||+++.+++
T Consensus 28 ~glG~~i~gg~~~~~----~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~ 80 (118)
T 1v6b_A 28 GSLDLALEGGVDSPV----GKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYT 80 (118)
T ss_dssp SCCCCEEEEBTTSSS----CSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCB
T ss_pred CccCEEEEcccCCCC----CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCC
Confidence 368999999987653 25999999999999999449999999999999999877
No 66
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.30 E-value=1.5e-12 Score=73.99 Aligned_cols=52 Identities=15% Similarity=0.309 Sum_probs=47.0
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.||.+... +++|.+|.+++||+++| |++||+|++|||+++.+++.
T Consensus 15 ~~~G~~l~gg~~~~~-----~v~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~ 66 (103)
T 1wf7_A 15 APWGFRLQGGKDFNM-----PLTISSLKDGGKASQAH-VRIGDVVLSIDGISAQGMTH 66 (103)
T ss_dssp SCCSCCEEEETTTTE-----EEEECCCCTTCHHHHTT-CCTTCBEEEETTEECSSCCH
T ss_pred CccCEEEeccccCCC-----CEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 469999999987644 79999999999999999 99999999999999998754
No 67
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.30 E-value=1e-12 Score=77.61 Aligned_cols=57 Identities=33% Similarity=0.504 Sum_probs=48.6
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.++.+... ..+.++||.+|.+++||+++|+|++||+|++|||+++.++++
T Consensus 37 ~glG~~i~~~~~~~~-~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~ 93 (127)
T 1wg6_A 37 AGLGVSLKGNKSRET-GTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSN 93 (127)
T ss_dssp TCCCCEEEEEEETTT-TEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCH
T ss_pred CccCeEEecccCCCC-CCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCH
Confidence 468999999876521 123489999999999999999999999999999999999874
No 68
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.30 E-value=5.4e-12 Score=73.85 Aligned_cols=54 Identities=26% Similarity=0.431 Sum_probs=48.0
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.++.+... .+++|..|.+++||+++|+|++||+|++|||+++.+.+.
T Consensus 36 ~glG~~l~~~~~~~~----~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~ 89 (124)
T 2daz_A 36 NGLGLSLAGNKDRSR----MSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSH 89 (124)
T ss_dssp SCCCEEEECBSSTTS----CCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCH
T ss_pred CccCEEEeccCCCCc----CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 479999999876532 489999999999999999999999999999999988765
No 69
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.29 E-value=1.1e-11 Score=69.11 Aligned_cols=52 Identities=31% Similarity=0.365 Sum_probs=44.8
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.++ . ...+++|.++.++|||+++|+|++||+|++|||+++.+.+.
T Consensus 15 ~~lG~~i~~~-~-----~~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~ 66 (93)
T 3o46_A 15 EPLGATIKKD-E-----QTGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRP 66 (93)
T ss_dssp SCCCEEEEEC-T-----TTCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCH
T ss_pred CCccEEEEec-C-----CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 3689999886 1 23489999999999999999999999999999999976654
No 70
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.29 E-value=1.2e-11 Score=68.51 Aligned_cols=51 Identities=24% Similarity=0.387 Sum_probs=45.6
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.++.+. .+++|..+.+++||+++| |++||+|++|||+++.+.+.
T Consensus 19 ~~~G~~~~~~~~~------~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~ 69 (91)
T 1m5z_A 19 EDFGFSVADGLLE------KGVYVKNIRPAGPGDLGG-LKPYDRLLQVNHVRTRDFDC 69 (91)
T ss_dssp SSSSEEEEECTTS------SCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCH
T ss_pred CCccEEEEeccCC------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 4689999987653 389999999999999999 99999999999999998764
No 71
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.29 E-value=4.1e-12 Score=73.74 Aligned_cols=51 Identities=18% Similarity=0.391 Sum_probs=45.9
Q ss_pred cCceEEecCCCCCCCCCCCcEEEEEeCCCChhhcc--CCCCCCCEEEEECCEEcCCCcc
Q psy12207 4 APIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVD--GRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 4 ~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~--grl~~gD~il~vng~~~~~~~~ 60 (69)
.|||++.+|.+... +++|.+|.+++||+++ | |++||+|++|||+++.+.++
T Consensus 28 ~~G~~l~gg~~~~~-----~v~V~~V~~~spA~~a~gG-L~~GD~Il~ing~~v~~~~~ 80 (119)
T 2cs5_A 28 RFGFNVKGGYDQKM-----PVIVSRVAPGTPADLCVPR-LNEGDQVVLINGRDIAEHTH 80 (119)
T ss_dssp CCSEEEEEEGGGTE-----EEEEEEECSSSTTTSSSSC-CCTTCEEEEETTBCTTSSCH
T ss_pred CcCEEEecccCCCC-----CeEEEEECCCCHHHHhhcC-CCCCCEEEEECCEECCCCCH
Confidence 49999999987543 8999999999999999 6 99999999999999998755
No 72
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.29 E-value=1.2e-11 Score=73.52 Aligned_cols=57 Identities=25% Similarity=0.253 Sum_probs=47.8
Q ss_pred CcCceEEecCCCCCC-------CCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQH-------IPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~-------~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.++.+... .....+++|.+|.+++||+++| |++||+|++|||+++.+++.
T Consensus 39 ~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~ 102 (132)
T 3l4f_D 39 EGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGH 102 (132)
T ss_dssp SCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGT-CCTTCEEEEESSSBCTTSCH
T ss_pred CcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 479999999986421 1123479999999999999999 99999999999999998765
No 73
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.28 E-value=1e-11 Score=69.72 Aligned_cols=56 Identities=20% Similarity=0.285 Sum_probs=43.9
Q ss_pred CcCceEEec-CCCCC-CCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCc
Q psy12207 3 IAPIYNIAG-GIGNQ-HIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 3 ~~lG~~i~G-G~~~~-~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~ 59 (69)
..|||++.+ |.... ....+.+++|..+.+++||+++| |++||+|++|||+++.+++
T Consensus 16 ~~~Gf~l~~~g~~~~~~~~~~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~ 73 (96)
T 2ego_A 16 QTFGFEIQTYGLHHREEQRVEMVTFVARVHESSPAQLAG-LTPGDTIASVNGLNVEGIR 73 (96)
T ss_dssp CCCSEEEEEEEC-------CCEEEEEEEECTTCHHHHTT-CCTTCEEEEETTEECTTCC
T ss_pred CCccEEEEeccccccCCCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCC
Confidence 479999998 33211 11113489999999999999999 9999999999999999864
No 74
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.27 E-value=1.9e-11 Score=69.93 Aligned_cols=55 Identities=33% Similarity=0.445 Sum_probs=47.3
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~ 59 (69)
..|||++.++.+... ++.+++|..|.+++||+++|+|++||+|++|||+++.+.+
T Consensus 22 ~glG~~~~~~~~~~~--~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~ 76 (111)
T 2koj_A 22 EGLGFSITSRDVTIG--GSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKS 76 (111)
T ss_dssp TBTCEEEEECSCSSS--SSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSC
T ss_pred CccCEEEEeccCCCC--CCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCC
Confidence 468999998765432 3458999999999999999989999999999999998764
No 75
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.27 E-value=1.3e-11 Score=70.23 Aligned_cols=52 Identities=31% Similarity=0.509 Sum_probs=46.0
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.++.+... +++|..|.+++||+++| |++||+|++|||+++.+.+.
T Consensus 27 ~~lG~~~~~~~~~~~-----g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~ 78 (104)
T 1wi2_A 27 AQLGFNIRGGKASQL-----GIFISKVIPDSDAHRAG-LQEGDQVLAVNDVDFQDIEH 78 (104)
T ss_dssp CCCSEEEECCSSSCC-----CCEEEEECTTSHHHHHT-CCTTCEEEEETTEECSSCCH
T ss_pred CCccEEEEcccCCCC-----CEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 468999999876543 89999999999999999 99999999999999998543
No 76
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.27 E-value=2.9e-12 Score=74.09 Aligned_cols=56 Identities=25% Similarity=0.458 Sum_probs=47.5
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcC-CCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVS-KGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~-~~~~ 60 (69)
..|||++.++.+... .+.+++|..|.++|||+++|+|++||+|++|||+++. +++.
T Consensus 32 ~~lG~~i~~~~~~~~--~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~ 88 (117)
T 2o2t_A 32 GGLGFSVVGLRSENR--GELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITH 88 (117)
T ss_dssp SCSSCCEEEEECCC----CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCH
T ss_pred CCCCEEEeecccCCC--CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCH
Confidence 468999999876532 3458999999999999999999999999999999998 5554
No 77
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.27 E-value=1.2e-11 Score=69.89 Aligned_cols=52 Identities=29% Similarity=0.617 Sum_probs=45.9
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.++.+. .+++|..|.++|||+++|+|++||+|++|||+++.+.+.
T Consensus 22 ~glG~~~~~~~~~------~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~ 73 (104)
T 3i4w_A 22 TGLGFNIVGGEXG------EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASH 73 (104)
T ss_dssp TBTSEEEEECC-C------CCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCH
T ss_pred CccCEEEECCCCC------CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCH
Confidence 4689999988652 389999999999999999999999999999999987765
No 78
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.27 E-value=1.6e-11 Score=68.87 Aligned_cols=52 Identities=23% Similarity=0.459 Sum_probs=45.3
Q ss_pred cCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 4 APIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 4 ~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
.|||++.++.+.. .+++|..+.+++||+++|+|++||+|++|||+++.+.+.
T Consensus 17 ~lG~~i~~~~~~~-----~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~ 68 (97)
T 1n7e_A 17 PLGITISGTEEPF-----DPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPL 68 (97)
T ss_dssp CCCEEEECCSSTT-----SCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCH
T ss_pred CcCEEEEcccCCC-----CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCH
Confidence 5899999875432 389999999999999999999999999999999987653
No 79
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.26 E-value=1.3e-11 Score=69.67 Aligned_cols=52 Identities=29% Similarity=0.542 Sum_probs=46.8
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.++.+.. .+++|..|.+++||+++| |++||+|++|||+++.+++.
T Consensus 21 ~~lG~~~~~~~~~~-----~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~ 72 (101)
T 1uez_A 21 EGLGFSIRGGSEHG-----VGIYVSLVEPGSLAEKEG-LRVGDQILRVNDKSLARVTH 72 (101)
T ss_dssp TCSSEEEEECTTTT-----CCEEEEEECTTSHHHHHT-CCSSCCEEEETTEECSSCCH
T ss_pred CcccEEEeCCCCCC-----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCH
Confidence 36899999887644 389999999999999999 99999999999999998876
No 80
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.26 E-value=9e-12 Score=72.19 Aligned_cols=56 Identities=23% Similarity=0.408 Sum_probs=47.9
Q ss_pred CcCceEEecCCCCCCC-CCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHI-PGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~-~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.||.+.+.. ++..+++|.+|.+++||+ ++ |++||+|++|||+++.+++.
T Consensus 26 ~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~-~g-L~~GD~I~~Vng~~v~~~~~ 82 (117)
T 2csj_A 26 RGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD-GL-LQENDRVVMVNGTPMEDVLH 82 (117)
T ss_dssp STTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHH-HH-BCTTCEEEEESSCBCBTCCH
T ss_pred CccCEEEeCCcCCccccCCCCCEEEEEECCCCccc-cc-CCCCCEEEEECCEECCCcCH
Confidence 5799999999876542 245689999999999997 66 99999999999999988765
No 81
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.25 E-value=9.9e-12 Score=73.31 Aligned_cols=53 Identities=19% Similarity=0.374 Sum_probs=46.8
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.|+.+.. .+++|.+|.+++||+++|+|++||+|++|||+++.+.+.
T Consensus 29 ~g~G~~i~g~~~~~-----~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~ 81 (129)
T 2kpk_A 29 RGFGFTVVGGDEPD-----EFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTH 81 (129)
T ss_dssp SCCSEEEEEEEETT-----EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCH
T ss_pred CcccEEEeCccCCC-----CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 36899999987643 389999999999999999999999999999999997653
No 82
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=99.24 E-value=2.9e-11 Score=67.28 Aligned_cols=57 Identities=33% Similarity=0.511 Sum_probs=47.2
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.++.+... ....+++|..+.+++||+++|+|++||+|++|||+++.+.+.
T Consensus 15 ~~lG~~i~~~~~~~~-~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~ 71 (97)
T 2iwn_A 15 QGLGITIAGYIGDKK-LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTN 71 (97)
T ss_dssp TBSCEEEECCCCC-----CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCH
T ss_pred CCCcEEEEccCCCCC-CCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCH
Confidence 468999998876432 234589999999999999999999999999999999998764
No 83
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.24 E-value=8.2e-12 Score=69.54 Aligned_cols=44 Identities=16% Similarity=0.211 Sum_probs=39.9
Q ss_pred cCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 4 APIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 4 ~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
.|||++.+| +|.++.+++||+++| |++||+|++|||+++.++++
T Consensus 17 ~~Gf~i~~g------------~I~~v~~gspA~~aG-l~~GD~Il~VNG~~v~~~~~ 60 (82)
T 1r6j_A 17 HVGFIFKNG------------KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKD 60 (82)
T ss_dssp CCCEEEETT------------EEEEECTTSHHHHHT-CCSSEEEEEETTEECTTCCH
T ss_pred CeEEEEECC------------EEEEecCCCHHHHcC-CCCCCEEEEECCEEcCCCCH
Confidence 489999865 379999999999999 99999999999999998886
No 84
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.24 E-value=1.5e-11 Score=71.49 Aligned_cols=54 Identities=13% Similarity=0.201 Sum_probs=46.4
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.++.+... .+++|.+|.+++||+++|+|++||+|++|||+++.+.+.
T Consensus 27 ~~lG~~i~~~~~~~~----~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~ 80 (117)
T 1v62_A 27 SALGISLTTTSLRNK----SVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSL 80 (117)
T ss_dssp CCCCCEEEEECCSSS----CEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCH
T ss_pred CcccEEEEccCCCCC----CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 478999998876432 259999999999999999999999999999999977554
No 85
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.24 E-value=3.2e-11 Score=66.75 Aligned_cols=50 Identities=24% Similarity=0.345 Sum_probs=44.7
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~ 59 (69)
..|||++.++.+. .+++|..|.+++||+++| |++||+|++|||+++.+.+
T Consensus 15 ~g~G~~~~~~~~~------~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~ 64 (90)
T 2he4_A 15 QGYGFNLHSDKSR------PGQYIRSVDPGSPAARSG-LRAQDRLIEVNGQNVEGLR 64 (90)
T ss_dssp TBCCEEEEECSSS------SSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTSC
T ss_pred CCccEEEEccCCC------CCEEEEEECCCChHHHCC-CCCCCEEEEECCEECCCCC
Confidence 4689999987652 389999999999999999 9999999999999999984
No 86
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.24 E-value=3.1e-11 Score=72.31 Aligned_cols=55 Identities=36% Similarity=0.654 Sum_probs=46.8
Q ss_pred cCceEEecCCCCCC-------CCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCc
Q psy12207 4 APIYNIAGGIGNQH-------IPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 4 ~lG~~i~GG~~~~~-------~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~ 59 (69)
.|||++.+|.+... .+...+++|..|.+++||+++| |++||+|++|||+++.+++
T Consensus 39 ~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~ 100 (139)
T 2vz5_A 39 ILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVT 100 (139)
T ss_dssp ECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCC
T ss_pred cccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEEcCCCC
Confidence 58999999987421 1234699999999999999999 9999999999999999754
No 87
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.23 E-value=3e-11 Score=73.95 Aligned_cols=58 Identities=57% Similarity=0.927 Sum_probs=51.1
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.++.+....+...+++|..|.++|||+++|+|++||+|++|||+++.+++.
T Consensus 111 ~~lG~~~~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~ 168 (196)
T 3gsl_A 111 KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMH 168 (196)
T ss_dssp TBSCEEEEESBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBH
T ss_pred CCceEEEEccCCCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCH
Confidence 3689999998877665566799999999999999999999999999999999998554
No 88
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.23 E-value=2.4e-11 Score=67.97 Aligned_cols=53 Identities=25% Similarity=0.322 Sum_probs=44.7
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~ 59 (69)
..|||++.+..+.+ ...+++|..|.+++||+++| |++||+|++|||+++.+.+
T Consensus 14 ~~~G~~l~~~~~~~---~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~ 66 (96)
T 2v90_A 14 QGFGFLLREEKGLD---GRPGQFLWEVDPGLPAKKAG-MQAGDRLVAVAGESVEGLG 66 (96)
T ss_dssp TBSCEEEEEEECTT---SCEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCC
T ss_pred CcccEEEEeccCCC---CCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCC
Confidence 47899998844322 23489999999999999999 9999999999999999854
No 89
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.23 E-value=6.1e-11 Score=67.81 Aligned_cols=57 Identities=26% Similarity=0.291 Sum_probs=47.2
Q ss_pred CcCceEEecCCCCCCC-------CCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHI-------PGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~-------~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.++.+.... ....+++|..|.+++||+++| |++||+|++|||+++.+.++
T Consensus 19 ~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~ 82 (109)
T 1q3o_A 19 EGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGH 82 (109)
T ss_dssp SCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCH
T ss_pred CCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 4789999998864311 112379999999999999999 99999999999999998843
No 90
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.23 E-value=4e-11 Score=70.49 Aligned_cols=58 Identities=21% Similarity=0.375 Sum_probs=46.3
Q ss_pred CcCceEEecCCCCCC----CCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQH----IPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~----~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.++.+... .+...+++|..|.++|||+++|+|++||+|++|||+++.+.+.
T Consensus 36 ~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~ 97 (123)
T 2iwq_A 36 KSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASH 97 (123)
T ss_dssp SCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCH
T ss_pred CCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 368999998765432 1234589999999999999999999999999999999998543
No 91
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=99.22 E-value=6.1e-11 Score=68.20 Aligned_cols=52 Identities=21% Similarity=0.364 Sum_probs=46.5
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.++.+... +++|..|.+++||+++| |++||+|++|||+++.+.+.
T Consensus 27 ~~lG~~l~~~~~~~~-----gv~V~~V~~~s~A~~aG-L~~GD~Il~vng~~v~~~~~ 78 (114)
T 1x5n_A 27 RGLGCSISSGPIQKP-----GIFISHVKPGSLSAEVG-LEIGDQIVEVNGVDFSNLDH 78 (114)
T ss_dssp CCCCEEEEECCSSSC-----SEEEEEECTTSTTTTTT-CCTTCEEEEETTEETTSCCT
T ss_pred CceeEEEeecCCCCC-----CEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 468999999865443 89999999999999999 99999999999999998865
No 92
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.22 E-value=2.5e-11 Score=87.78 Aligned_cols=58 Identities=41% Similarity=0.639 Sum_probs=53.3
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||+|.||.+.+....+.+++|..|.+++||+++|+|+.||+|++|||+++.++++
T Consensus 70 ~glGf~i~gg~~~~~~~~~~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~ 127 (721)
T 2xkx_A 70 SGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTH 127 (721)
T ss_pred CCCCEEEeCCcCCcccCCCCCeEEEEeCCCCHHHhcCCCCCCCEEEEECCEECCCCCH
Confidence 3799999999998766667799999999999999999999999999999999999875
No 93
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.22 E-value=3.5e-11 Score=74.68 Aligned_cols=55 Identities=20% Similarity=0.292 Sum_probs=48.7
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCC--Ccc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSK--GPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~--~~~ 60 (69)
..|||++.+|.+.... .+++|..|.++|||+++|+|+.||+|++|||+++.+ .+.
T Consensus 29 ~~lG~~i~~g~~~~~~---~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~ 85 (206)
T 3r0h_A 29 KPMGVIVCGGKNNHVT---TGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTT 85 (206)
T ss_dssp SCCCEEEECCSSSSCC---SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCH
T ss_pred CCcCEEEecccCCCCC---CCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCH
Confidence 4789999999986431 489999999999999998899999999999999998 655
No 94
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.22 E-value=3.2e-11 Score=66.98 Aligned_cols=38 Identities=24% Similarity=0.445 Sum_probs=35.7
Q ss_pred cEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 23 GIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 23 ~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
+++|.+|.++|||+++|+|++||+|++|||+++.+.+.
T Consensus 22 gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~ 59 (88)
T 3e17_A 22 QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSL 59 (88)
T ss_dssp EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCH
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 79999999999999999999999999999999977665
No 95
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.22 E-value=5e-12 Score=71.39 Aligned_cols=52 Identities=25% Similarity=0.508 Sum_probs=46.1
Q ss_pred cCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 4 APIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 4 ~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
.|||++.++.+... +++|..|.+++||+++|+|++||+|++|||+++.+.+.
T Consensus 23 g~G~~~~~~~~~~~-----~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~ 74 (103)
T 1wfv_A 23 GFGFSIRGGREYKM-----DLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTH 74 (103)
T ss_dssp SSSBCCEEETTTTE-----EEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCH
T ss_pred cCCEEEeccccCCC-----CEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 58899988876543 89999999999999999999999999999999998754
No 96
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.21 E-value=4.4e-11 Score=67.54 Aligned_cols=57 Identities=21% Similarity=0.384 Sum_probs=43.9
Q ss_pred CcCceEEecCCCCCC----CCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCc
Q psy12207 3 IAPIYNIAGGIGNQH----IPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~----~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~ 59 (69)
..|||++.++.+... .+...+++|.+|.++|||+++|+|++||+|++|||+++.+.+
T Consensus 16 ~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~ 76 (103)
T 2fcf_A 16 KSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDAS 76 (103)
T ss_dssp CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCC
T ss_pred CceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCC
Confidence 368999999765332 122358999999999999999999999999999999999854
No 97
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=99.21 E-value=4.5e-11 Score=69.39 Aligned_cols=50 Identities=22% Similarity=0.426 Sum_probs=43.3
Q ss_pred cCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCC
Q psy12207 4 APIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKG 58 (69)
Q Consensus 4 ~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~ 58 (69)
.|||++.++.+.. .+++|..+.++|||+++|+|++||+|++|||+++.+.
T Consensus 37 ~lG~~l~~~~~~~-----~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~ 86 (114)
T 2gzv_A 37 LIGISIGGGAQYC-----PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGK 86 (114)
T ss_dssp CCSEEEEECCC-------CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTC
T ss_pred cEeEEEEeCCCCC-----CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCC
Confidence 4899999887643 3899999999999999999999999999999999543
No 98
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.21 E-value=6.7e-12 Score=71.07 Aligned_cols=51 Identities=24% Similarity=0.483 Sum_probs=44.9
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCC
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKG 58 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~ 58 (69)
..|||++.+|.+... +++|.+|.+++||+++|.|++||+|++||++++.+.
T Consensus 21 ~~~G~~~~gg~~~~~-----~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~ 71 (100)
T 2edp_A 21 APWGFTLKGGLEHCE-----PLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGS 71 (100)
T ss_dssp SCCCCCEEEEGGGTE-----EEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSC
T ss_pred CCcCEEEeccCCCCC-----CeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccch
Confidence 368999999887544 899999999999999933999999999999999885
No 99
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=99.21 E-value=6.5e-11 Score=69.16 Aligned_cols=55 Identities=33% Similarity=0.433 Sum_probs=47.2
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~ 59 (69)
..|||++.++.+... +..+++|..|.+++||+++|+|++||+|++|||+++.+.+
T Consensus 41 ~~lG~~l~~~~~~~~--g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~ 95 (121)
T 2kom_A 41 EGLGFSITSRDVTIG--GSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKS 95 (121)
T ss_dssp TCCCEEEECCCCSSS--SSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSC
T ss_pred CcEeEEEEeccCCcC--CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCC
Confidence 368999998765432 3458999999999999999999999999999999999864
No 100
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.21 E-value=5.6e-12 Score=70.51 Aligned_cols=51 Identities=25% Similarity=0.370 Sum_probs=45.4
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~ 59 (69)
..|||++.+|.+... +++|..|.+++||+++| |++||+|++|||+++.+.+
T Consensus 16 ~~lG~~l~~g~~~~~-----g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~ 66 (94)
T 1vb7_A 16 APWGFRISGGRDFHT-----PIIVTKVTERGKAEAAD-LRPGDIIVAINGQSAENML 66 (94)
T ss_dssp SCCSBCCEEETTTTE-----EEECCCBCTTSSHHHHT-CCTTCEEEEETTEECTTCC
T ss_pred CCccEEEecccCCCC-----CeEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCC
Confidence 468999998876443 89999999999999999 9999999999999999873
No 101
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.21 E-value=2.2e-11 Score=69.96 Aligned_cols=50 Identities=18% Similarity=0.320 Sum_probs=43.7
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.+ . +.+++|++|.++|||+++|+|++||+|++|||+++.+.+.
T Consensus 14 ~glG~~i~~---~-----~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~ 63 (106)
T 2la8_A 14 KELGLSLSP---N-----EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPF 63 (106)
T ss_dssp STTCCEEEE---C-----SSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCH
T ss_pred CccCEEEEe---C-----CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCH
Confidence 467888876 1 2489999999999999999999999999999999998765
No 102
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.21 E-value=1.9e-11 Score=69.22 Aligned_cols=55 Identities=25% Similarity=0.383 Sum_probs=47.6
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.++.+.. .+.+++|..|.+++||+++|+|++||+|++|||+++.+.+.
T Consensus 22 ~g~G~~l~~~~~~~---~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~ 76 (104)
T 2djt_A 22 AGFGLTLGGGRDVA---GDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTH 76 (104)
T ss_dssp SSCCEEEECCEETT---EECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCH
T ss_pred CCccEEEEeccCCC---CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 46899999987652 23489999999999999999999999999999999998653
No 103
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.20 E-value=6.2e-11 Score=66.86 Aligned_cols=50 Identities=30% Similarity=0.529 Sum_probs=44.6
Q ss_pred cCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCc
Q psy12207 4 APIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 4 ~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~ 59 (69)
.|||++.++.... .+++|..|.+++||+++| |++||+|++|||+++.+.+
T Consensus 23 ~lG~~~~~~~~~~-----~gv~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~ 72 (100)
T 2eeh_A 23 RLGFSVRGGSEHG-----LGIFVSKVEEGSSAERAG-LCVGDKITEVNGLSLESTT 72 (100)
T ss_dssp SCSEEEECCTTTT-----CCEEEEEECTTSHHHHHT-CCSSCEEEEETTEECSSCC
T ss_pred CccEEEEccccCC-----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCC
Confidence 4899999876532 389999999999999999 9999999999999999875
No 104
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.19 E-value=3.2e-11 Score=67.76 Aligned_cols=50 Identities=18% Similarity=0.320 Sum_probs=43.2
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.+ . +.+++|.+|.++|||+++|+|++||+|++|||+++.+.+.
T Consensus 20 ~glG~~~~~---~-----~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~ 69 (96)
T 2qkv_A 20 KELGLSLSP---N-----EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPF 69 (96)
T ss_dssp BCCCEEEEE---C-----SSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCH
T ss_pred CCccEEEEe---C-----CCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCH
Confidence 357888776 1 2489999999999999999999999999999999998665
No 105
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=99.19 E-value=8.3e-11 Score=65.95 Aligned_cols=50 Identities=14% Similarity=0.301 Sum_probs=43.4
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~ 59 (69)
..+||++.++.+. .+++|..|.++|||+++| |++||+|++|||+++.+.+
T Consensus 20 ~g~G~~~~~~~~~------~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~ 69 (98)
T 2jxo_A 20 SGYGFNLHSDKSK------PGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQ 69 (98)
T ss_dssp TCCCEEEECCCSS------SCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCC
T ss_pred CcccEEEEecCCC------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCC
Confidence 4688998876532 389999999999999999 9999999999999999843
No 106
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.18 E-value=4.5e-11 Score=68.46 Aligned_cols=51 Identities=33% Similarity=0.572 Sum_probs=45.0
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.++.+ .+++|..|.+++||+++|+|++||+|++|||+++.+.+.
T Consensus 26 ~~lG~~l~~~~~-------~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~ 76 (111)
T 2dlu_A 26 SGLGFGIVGGKT-------SGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTS 76 (111)
T ss_dssp SCCCEEEECCSS-------SSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCH
T ss_pred CccCEEEeccCC-------CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 468999987654 379999999999999999999999999999999987654
No 107
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=99.18 E-value=2.5e-11 Score=79.72 Aligned_cols=53 Identities=30% Similarity=0.375 Sum_probs=46.9
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||+|.||.+... +++|.+|.+++||++++.|++||+|++|||+++.++++
T Consensus 89 ~glGf~I~gg~d~~~-----gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~ 141 (263)
T 1z87_A 89 GGLGISIKGGRENKM-----PILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATH 141 (263)
T ss_dssp CCCCCEEEEETTTTE-----EEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCH
T ss_pred CCEeEEEeeccCCCC-----CEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCH
Confidence 479999999987654 89999999999999943399999999999999999865
No 108
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=99.18 E-value=6.5e-11 Score=67.45 Aligned_cols=51 Identities=20% Similarity=0.382 Sum_probs=43.8
Q ss_pred cCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCc
Q psy12207 4 APIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 4 ~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~ 59 (69)
.|||++.+.... +..+++|..+.++|||+++| |++||+|++|||+++.+.+
T Consensus 21 ~~Gf~v~~~~~~----~~~g~~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~ 71 (94)
T 3kzd_A 21 TYGFSLSSVEED----GIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALN 71 (94)
T ss_dssp CCSEEEEEECSS----SSCEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCC
T ss_pred CcCEEEEecCCC----CcCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCC
Confidence 689999875432 22489999999999999999 9999999999999998754
No 109
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.17 E-value=1.7e-11 Score=70.62 Aligned_cols=54 Identities=28% Similarity=0.455 Sum_probs=46.7
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.++.+.+. .+++|..|.+++||+++|+|++||+|++|||+++.+++.
T Consensus 28 ~glG~~l~~~~~~~~----~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~ 81 (116)
T 2dm8_A 28 SGLGLSIVGGKDTPL----NAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSH 81 (116)
T ss_dssp SCCCCCCBCCTTSSC----SSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCH
T ss_pred CcccEEEeCCCCCCc----CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCH
Confidence 468888888776542 389999999999999999999999999999999998653
No 110
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=99.17 E-value=1.8e-11 Score=72.08 Aligned_cols=58 Identities=26% Similarity=0.375 Sum_probs=47.3
Q ss_pred CcCceEEecCCCCCCC----CCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHI----PGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~----~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.++.+.... ....+++|++|.++|||+++|+|++||+|++|||+++.+.+.
T Consensus 42 ~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~ 103 (128)
T 1nf3_C 42 KPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSL 103 (128)
T ss_dssp SCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCH
T ss_pred CCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCH
Confidence 4699999998753211 112479999999999999999899999999999999977665
No 111
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.17 E-value=8.9e-11 Score=67.65 Aligned_cols=56 Identities=21% Similarity=0.300 Sum_probs=46.3
Q ss_pred CcCceEEecCCCCCCCC--CCCcEEEEEeCCCChhhc-cCCCCCCCEEEEECCEEcCCCc
Q psy12207 3 IAPIYNIAGGIGNQHIP--GDNGIYVTKIMDGGAAQV-DGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~--~~~~i~I~~v~~~g~a~~-~grl~~gD~il~vng~~~~~~~ 59 (69)
..|||++.++.+..... -..+++|..|.+++||++ +| |++||+|++|||+++.+.+
T Consensus 22 ~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~ag-L~~GD~I~~ing~~v~~~~ 80 (114)
T 1uew_A 22 EGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAK-LKVGDRILAVNGQSIINMP 80 (114)
T ss_dssp SCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSS-CCTTCBEEEETTBCTTTSC
T ss_pred CCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCC-CCCCCEEEEECCEECCCCC
Confidence 46999999987654211 123789999999999999 88 9999999999999999864
No 112
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=99.16 E-value=3.6e-11 Score=74.86 Aligned_cols=52 Identities=25% Similarity=0.534 Sum_probs=46.6
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.||..... +++|..|.++|||+++| |++||+|++|||+++.+++.
T Consensus 96 ~~lG~~i~~~~~~~~-----~~~V~~V~~gspA~~aG-L~~GD~Il~vng~~v~~~~~ 147 (192)
T 3k1r_A 96 EGLGLSVRGGLEFGC-----GLFISHLIKGGQADSVG-LQVGDEIVRINGYSISSCTH 147 (192)
T ss_dssp TCCCEEEEEEGGGTE-----EEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCH
T ss_pred CceeEEEEcccccCC-----CEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 478999999876543 89999999999999999 99999999999999998654
No 113
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.16 E-value=8.7e-11 Score=65.21 Aligned_cols=50 Identities=22% Similarity=0.258 Sum_probs=42.4
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhc-cCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQV-DGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~-~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.++. +.+++|.++.++|||++ +| |++||+|++|||+++.+++.
T Consensus 13 ~~lG~~i~~~~-------~~~~~I~~V~~gspA~~~ag-L~~GD~I~~Ing~~v~~~~~ 63 (88)
T 1kwa_A 13 EPMGITLKMNE-------LNHCIVARIMHGGMIHRQGT-LHVGDEIREINGISVANQTV 63 (88)
T ss_dssp SCCCEEEECSC-------GGGEEEEEECTTSHHHHHTC-CCTTCEEEEETTEEGGGSCH
T ss_pred CceeEEEEeCC-------CCCEEEEEECCCCHHHHcCC-CCCCCEEEEECCEECCCCCH
Confidence 46899998742 13799999999999999 65 99999999999999986554
No 114
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.15 E-value=4.8e-11 Score=66.42 Aligned_cols=50 Identities=22% Similarity=0.304 Sum_probs=43.1
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~ 59 (69)
..|||++.++.+. .+++|..|.++|||+++| |++||+|++|||+++.+.+
T Consensus 16 ~~~G~~l~~~~~~------~~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~ 65 (95)
T 3r68_A 16 NGYGFYLRAGPEQ------KGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALD 65 (95)
T ss_dssp TBCSCEEEEC--C------CSEEEECCCTTSHHHHHT-CCTTEEEEEETTEECTTCC
T ss_pred CcccEEEEecCCC------CCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCC
Confidence 4688888876554 389999999999999999 9999999999999999884
No 115
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.15 E-value=1.5e-10 Score=65.80 Aligned_cols=57 Identities=21% Similarity=0.318 Sum_probs=45.2
Q ss_pred CcCceEEecCCCCCCC----C---CCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHI----P---GDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~----~---~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.++.+.... . ....+||..+.+++||+++| |++||+|++|||+++.+++.
T Consensus 17 ~g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~ 80 (107)
T 3qe1_A 17 SGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAG-VRKGDRILEVNGVNVEGATH 80 (107)
T ss_dssp TBTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCH
T ss_pred CCCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 3689999998543210 0 02356899999999999999 99999999999999997654
No 116
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.15 E-value=1.1e-10 Score=66.39 Aligned_cols=49 Identities=20% Similarity=0.372 Sum_probs=42.0
Q ss_pred cCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCc
Q psy12207 4 APIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 4 ~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~ 59 (69)
.||+++.... +.+++|.+|.++|||+++|+|++||+|++|||+++.+++
T Consensus 25 ~lG~~l~~~~-------~~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~ 73 (97)
T 2ejy_A 25 PMGICLKLNE-------KQSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHS 73 (97)
T ss_dssp CCSEEEEECT-------TCCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSC
T ss_pred CeeEEEEeCC-------CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCC
Confidence 5778777532 248999999999999999999999999999999999744
No 117
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.14 E-value=1.6e-11 Score=69.72 Aligned_cols=51 Identities=22% Similarity=0.322 Sum_probs=45.0
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~ 59 (69)
..|||++.++.+... +++|..|.+++||+++| |++||+|++||++++.+++
T Consensus 15 ~~lG~~l~~g~~~~~-----~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~ 65 (103)
T 1v5l_A 15 APWGFRLSGGIDFNQ-----PLVITRITPGSKAAAAN-LCPGDVILAIDGFGTESMT 65 (103)
T ss_dssp SCCSBCCEEETTTTE-----EEECSCBCTTSTTGGGT-CCTTCBEEEETTEECSSCC
T ss_pred CCcCEEEeccccCCC-----CeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCC
Confidence 468999988876543 89999999999999999 9999999999999999843
No 118
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=99.14 E-value=8.6e-11 Score=68.00 Aligned_cols=52 Identities=29% Similarity=0.622 Sum_probs=46.2
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.++.+. .+++|..|.+++||+++|+|++||+|++|||+++.+.+.
T Consensus 25 ~glG~~l~~~~~~------~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~ 76 (119)
T 1tp5_A 25 TGLGFNIVGGEDG------EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASH 76 (119)
T ss_dssp SCCCEEEEECGGG------CCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCH
T ss_pred CCccEEEecCCCC------CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 3589999987642 389999999999999999999999999999999998865
No 119
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.13 E-value=1.3e-10 Score=72.06 Aligned_cols=53 Identities=26% Similarity=0.350 Sum_probs=47.1
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.+|.+... +++|..+.+++||++++.|++||+|++|||+++.++++
T Consensus 19 ~~lG~~i~~~~~~~~-----~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~ 71 (200)
T 2qt5_A 19 TTLGLTVSGGIDKDG-----KPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRH 71 (200)
T ss_dssp CCCCEEEECCTTSSS-----CSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCH
T ss_pred CCCCEEEecccCCCC-----CeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCH
Confidence 479999999987654 79999999999999993399999999999999999854
No 120
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=99.13 E-value=1.5e-10 Score=68.02 Aligned_cols=49 Identities=27% Similarity=0.450 Sum_probs=44.1
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~ 59 (69)
..|||++.++.+ .+++|..|.+++||+++| |++||+|++|||+++.+.+
T Consensus 39 ~~lG~~l~~~~~-------~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~ 87 (124)
T 3tsv_A 39 DSVGLRLAGGND-------VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNII 87 (124)
T ss_dssp SCCCEEEEECTT-------SCEEEEEECTTCHHHHTT-CCTTEEEEEETTEECSSCC
T ss_pred CceeEEEecCCC-------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCC
Confidence 478999988654 389999999999999999 9999999999999999884
No 121
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.13 E-value=1.5e-10 Score=67.84 Aligned_cols=52 Identities=29% Similarity=0.409 Sum_probs=45.0
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.++.... .+++|..|.+++||+++| |++||+|++|||+++.+.+.
T Consensus 32 ~~lG~~~~~~~~~~-----~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~ 83 (128)
T 1uf1_A 32 RSLGLTIRGGAEYG-----LGIYITGVDPGSEAEGSG-LKVGDQILEVNGRSFLNILH 83 (128)
T ss_dssp CCCCEEEECCTTTT-----CCCEEEEECTTCHHHHHT-CCTTCEEEEETTEECSSCCH
T ss_pred CccCEEEECcccCC-----CCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCH
Confidence 35899998865432 389999999999999999 99999999999999998764
No 122
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=98.72 E-value=5.7e-12 Score=73.14 Aligned_cols=52 Identities=27% Similarity=0.383 Sum_probs=45.0
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhc-cCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQV-DGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~-~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.+|.+... +++|.+|.++|||++ +| |++||+|++|||+++.+.+.
T Consensus 39 ~glG~~l~~g~~~~~-----gv~V~~V~~~spA~~~aG-L~~GD~Il~ING~~v~~~~~ 91 (112)
T 2lob_A 39 EGLGISITGGKEHGV-----PILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKH 91 (112)
Confidence 468999999876543 899999999999999 77 99999999999999976544
No 123
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.12 E-value=2.5e-10 Score=66.60 Aligned_cols=56 Identities=16% Similarity=0.202 Sum_probs=46.4
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~ 59 (69)
..|||++.++...... ...+++|..|.+++||+++|+|++||+|++||++++.+.+
T Consensus 27 ~glG~~l~~~~~~~~~-~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~ 82 (122)
T 1v5q_A 27 TGFGIQLQGSVFATET-LSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDST 82 (122)
T ss_dssp SSSCEEEECCSCCSSS-CSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSC
T ss_pred CccCEEEecccccCCc-CCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCC
Confidence 5689999998533211 2347999999999999999999999999999999998844
No 124
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.12 E-value=1.5e-10 Score=65.72 Aligned_cols=50 Identities=20% Similarity=0.268 Sum_probs=44.0
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~ 59 (69)
..+||.+..+.+. .+++|..|.++|||+++| |++||+|++|||+++.+.+
T Consensus 13 ~~~G~~l~~~~~~------~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~ 62 (106)
T 3ngh_A 13 QNYGFFLRIEKDT------DGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEE 62 (106)
T ss_dssp CCCCCEEECCTTC------CSCEEECCCTTSHHHHTT-CCTTCEEEEETTEECTTSC
T ss_pred CeeCEEEEEEeCC------CCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCCC
Confidence 4688888876432 379999999999999999 9999999999999999887
No 125
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.12 E-value=2.1e-10 Score=63.97 Aligned_cols=48 Identities=25% Similarity=0.447 Sum_probs=42.0
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.+. .+++|..|.+++||+++| |++||+|++|||+++.+.+.
T Consensus 19 ~~~G~~l~~~---------~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~ 66 (93)
T 2dls_A 19 HGFGFTVSGD---------RIVLVQSVRPGGAAMKAG-VKEGDRIIKVNGTMVTNSSH 66 (93)
T ss_dssp SSCCEEEECS---------SSCEEEEECSSSTTTTTT-CCSSCEEEEETTEECSSSCH
T ss_pred CceeEEEeCC---------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 3578887642 379999999999999999 99999999999999998765
No 126
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=99.12 E-value=1.3e-10 Score=65.28 Aligned_cols=57 Identities=18% Similarity=0.051 Sum_probs=45.2
Q ss_pred CcCceEEecCCCCCCCC--CCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIP--GDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~--~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.++....... ...+++|..+.++|||+++| |++||+|++|||+++.+++.
T Consensus 13 ~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~ 71 (99)
T 3khf_A 13 KKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAG-LRAGDLITHINGESVLGLVH 71 (99)
T ss_dssp CCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCH
T ss_pred CCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 47899998775432111 11267999999999999999 99999999999999996654
No 127
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.11 E-value=1.5e-10 Score=65.38 Aligned_cols=50 Identities=22% Similarity=0.306 Sum_probs=43.7
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~ 59 (69)
..|||++.++.+ ..+++|..|.+++||+++| |++||+|++|||+++.+.+
T Consensus 17 ~g~G~~l~~~~~------~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~ 66 (102)
T 2d90_A 17 NGYGFYLRAGPE------QKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALD 66 (102)
T ss_dssp SSSSCEEEECSS------SSSEEEECCCTTSTTTTTT-CCTTCEEEEESSCBCTTSC
T ss_pred CCccEEEEeecC------CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCC
Confidence 368999988543 2389999999999999999 9999999999999999875
No 128
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.11 E-value=1.4e-10 Score=64.66 Aligned_cols=45 Identities=22% Similarity=0.319 Sum_probs=40.0
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTV 55 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~ 55 (69)
..|||++.+. ..+++|.+|.+++||+++|.|++||+|++|||+++
T Consensus 18 ~~lG~~i~~~--------~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v 62 (91)
T 2e7k_A 18 EHLGVTFRVE--------GGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV 62 (91)
T ss_dssp CCCCEEEEES--------SSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC
T ss_pred CcEeEEEEec--------CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC
Confidence 3689999872 24899999999999999877999999999999999
No 129
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.11 E-value=3.7e-11 Score=66.71 Aligned_cols=49 Identities=24% Similarity=0.435 Sum_probs=40.8
Q ss_pred cCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCc
Q psy12207 4 APIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 4 ~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~ 59 (69)
.|||++.++.+. .+++|..|.++|||+++| |++||+|++|||+++.+.+
T Consensus 15 ~~G~~l~~~~~~------~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~ 63 (91)
T 2vsp_A 15 GYGFHLNAIRGL------PGSFIKEVQKGGPADLAG-LEDEDVIIEVNGVNVLDEP 63 (91)
T ss_dssp BTSCCCBCCTTC------SCCBC-CCCTTSHHHHTT-CCTTCEEEEETTEECTTSC
T ss_pred cccEEEEeccCC------CCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCC
Confidence 578888765442 378999999999999999 9999999999999998544
No 130
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.10 E-value=2e-10 Score=66.37 Aligned_cols=51 Identities=27% Similarity=0.417 Sum_probs=44.3
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCccc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPTL 61 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~~ 61 (69)
..|||++.++.+ .+++|..|.+++||+++| |++||+|++|||+++.+.+.+
T Consensus 30 ~~lG~~~~~~~~-------~gv~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~ 80 (117)
T 1uit_A 30 EPLGISIVSGEK-------GGIYVSKVTVGSIAHQAG-LEYGDQLLEFNGINLRSATEQ 80 (117)
T ss_dssp CCCCEEEEECTT-------SCEEEEEECTTSHHHHHT-CCTTCEECEETTEETTTCCHH
T ss_pred CCccEEEEccCC-------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHH
Confidence 357888877643 389999999999999999 999999999999999988763
No 131
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.09 E-value=4.4e-10 Score=63.55 Aligned_cols=55 Identities=18% Similarity=0.245 Sum_probs=42.7
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.+.... ....+++|.+|.+++||++++.|++||+|++|||+++.+.+.
T Consensus 21 ~~lG~~i~~~~~~---~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~ 75 (101)
T 2yt7_A 21 EGLGVALVESGWG---SLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPL 75 (101)
T ss_dssp CCCCEEEEECCCS---SSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCH
T ss_pred CccCEEEEeCCCC---CCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 3689999853221 123379999999999999965599999999999999955443
No 132
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.09 E-value=7.5e-11 Score=66.97 Aligned_cols=51 Identities=25% Similarity=0.383 Sum_probs=43.9
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.++.+ +.+++|..+.+++||+++| |++||+|++|||+++.+.+.
T Consensus 19 ~~~G~~l~~~~~------~~g~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~ 69 (106)
T 2eei_A 19 GSYGFSLKTVQG------KKGVYMTDITPQGVAMRAG-VLADDHLIEVNGENVEDASH 69 (106)
T ss_dssp SSCSCCEECCSS------CCSCEECCCCTTSHHHHHT-CCSSEEEEEETTEECTTCCH
T ss_pred CCCCEEEEeccC------CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 468888887643 2489999999999999999 99999999999999987654
No 133
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.08 E-value=3e-10 Score=63.01 Aligned_cols=48 Identities=21% Similarity=0.243 Sum_probs=41.2
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.+. .+++|..+.+++||+++| |++||+|++|||+++.+.+.
T Consensus 14 ~g~G~~l~~~---------~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~ 61 (91)
T 2f5y_A 14 DGFGFTICCD---------SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKC 61 (91)
T ss_dssp TBTSEEEECS---------SSCEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCH
T ss_pred CCccEEEecC---------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 3578888653 268999999999999999 99999999999999997643
No 134
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.08 E-value=4.1e-10 Score=62.98 Aligned_cols=45 Identities=24% Similarity=0.557 Sum_probs=38.4
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.+| +|++|.++|||+++| |++||+|++|||+++.+.+.
T Consensus 24 ~~lG~~~~~G------------~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~ 68 (90)
T 1y7n_A 24 YQLGFSVQNG------------IICSLMRGGIAERGG-VRVGHRIIEINGQSVVATPH 68 (90)
T ss_dssp SCCCEEEETT------------EEEEECTTSHHHHHT-CCSSCEEEEETTEECTTSCH
T ss_pred cccCeEecCC------------EEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 4678877542 899999999999999 99999999999999975443
No 135
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=99.07 E-value=2e-10 Score=65.12 Aligned_cols=57 Identities=18% Similarity=0.147 Sum_probs=45.1
Q ss_pred CcCceEEecCCCCC--CCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQ--HIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~--~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.+..... ......+++|..|.+++||+++| |++||+|++|||+++.+++.
T Consensus 27 ~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~ 85 (104)
T 2z17_A 27 ETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAG-LQAGDVLANINGVSTEGFTY 85 (104)
T ss_dssp SCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCH
T ss_pred CCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEEcCCCCH
Confidence 46899999843211 11234589999999999999999 99999999999999985543
No 136
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.07 E-value=4.7e-10 Score=64.63 Aligned_cols=48 Identities=19% Similarity=0.380 Sum_probs=41.9
Q ss_pred cCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCc
Q psy12207 4 APIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 4 ~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~ 59 (69)
.|||++.+. ..+++|..|.+++||+++|.|++||+|++|||+++.+.+
T Consensus 38 ~lG~~i~~~--------~~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~ 85 (113)
T 1va8_A 38 PLGATVRNE--------MDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKD 85 (113)
T ss_dssp CCCEEEEEC--------SSSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCC
T ss_pred ceeEEEEeC--------CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCC
Confidence 688888765 238999999999999999933999999999999999765
No 137
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=99.06 E-value=2.1e-10 Score=66.05 Aligned_cols=50 Identities=20% Similarity=0.268 Sum_probs=43.3
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~ 59 (69)
..|||++.++.+. .+++|..|.+++||+++| |++||+|++|||+++.+.+
T Consensus 25 ~~~G~~l~~~~~~------~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~ 74 (114)
T 2edz_A 25 QNYGFFLRIEKDT------DGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEE 74 (114)
T ss_dssp CCCSCEEECCTTC------CSCEEECCCTTCTTGGGT-CCTTCEEEEESSSBCSSSC
T ss_pred CcccEEEEEecCC------CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCC
Confidence 5688888765432 489999999999999999 9999999999999998863
No 138
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.06 E-value=3.9e-10 Score=69.93 Aligned_cols=55 Identities=16% Similarity=0.206 Sum_probs=47.7
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCC
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKG 58 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~ 58 (69)
..|||++.+|.+.... ...+++|..+.+++||+++|+|++||+|++|||+++.++
T Consensus 18 ~glG~~i~~~~~~~~~-~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~ 72 (196)
T 1p1d_A 18 TGFGIQLQGSVFATET-LSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDS 72 (196)
T ss_dssp TBCCCEEEECSSCSSS-CSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTS
T ss_pred CccCEEEeCCcCCCCC-CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCC
Confidence 4799999999875431 245899999999999999999999999999999999965
No 139
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=99.05 E-value=7.2e-10 Score=64.69 Aligned_cols=50 Identities=14% Similarity=0.301 Sum_probs=43.7
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~ 59 (69)
..|||++.++.+. .+++|..+.+++||+++| |++||+|++|||+++.+++
T Consensus 20 ~g~G~~l~~~~~~------~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~ 69 (128)
T 2kjd_A 20 SGYGFNLHSDKSK------PGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQ 69 (128)
T ss_dssp SSCCEEEEECSSS------CSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCC
T ss_pred CcccEEEEecCCC------CCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCC
Confidence 4689999876542 389999999999999999 9999999999999999843
No 140
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.04 E-value=4.6e-10 Score=65.63 Aligned_cols=54 Identities=24% Similarity=0.409 Sum_probs=46.0
Q ss_pred cCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 4 APIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 4 ~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
.||+++....... ...+++|..|.+++||+++|+|++||+|++|||+++.+...
T Consensus 33 ~lG~~~~~~~~~~---~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~ 86 (124)
T 1wh1_A 33 KLGLTVCYRTDDE---DDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQNREE 86 (124)
T ss_dssp CCCEEEECCCCCS---SCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCSHHH
T ss_pred cccEEEEecCCCC---CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCHHH
Confidence 5899988765542 23589999999999999999999999999999999987655
No 141
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.01 E-value=1.1e-10 Score=66.74 Aligned_cols=51 Identities=31% Similarity=0.645 Sum_probs=44.6
Q ss_pred cCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 4 APIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 4 ~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
.|||++.++.+ ..+++|..+.+++||+++|+|++||+|++||++++.+.+.
T Consensus 27 glG~~l~~~~~------~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~ 77 (113)
T 1um7_A 27 GLGFNIVGGED------GEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATH 77 (113)
T ss_dssp CSSBCCBCCST------TCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCH
T ss_pred cccEEEEeccC------CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 57888887754 2489999999999999999899999999999999998754
No 142
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=98.99 E-value=1.7e-10 Score=62.89 Aligned_cols=36 Identities=31% Similarity=0.515 Sum_probs=34.4
Q ss_pred cEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCc
Q psy12207 23 GIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 23 ~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~ 59 (69)
+++|..+.+++||+++| |++||+|++|||+++.+.+
T Consensus 24 ~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~ 59 (83)
T 2kv8_A 24 PCVLSCVMRGSPADFVG-LRAGDQILAVNEINVKKAS 59 (83)
T ss_dssp SCBCCBCCTTSTTTTTT-CCTTCEEEEETTEECSSCC
T ss_pred CeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCC
Confidence 79999999999999999 9999999999999999884
No 143
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=98.99 E-value=1.9e-09 Score=61.62 Aligned_cols=51 Identities=20% Similarity=0.362 Sum_probs=43.2
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~ 59 (69)
..|||++.+..+ ..+++|..+.+++||+++|.|++||+|++|||+++.+++
T Consensus 13 ~glG~~~~~~~~------~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~ 63 (112)
T 1qau_A 13 GGLGFLVKERVS------KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLS 63 (112)
T ss_dssp TBTSEEEEECSS------SSCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSC
T ss_pred CceeEEEEecCC------CCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCC
Confidence 368999887654 238999999999999999933999999999999999844
No 144
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.98 E-value=1.8e-09 Score=59.53 Aligned_cols=37 Identities=24% Similarity=0.430 Sum_probs=34.5
Q ss_pred cEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCc
Q psy12207 23 GIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 23 ~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~ 59 (69)
+++|.++.++|||+++|+|++||+|++|||+++.+++
T Consensus 24 gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~ 60 (92)
T 3cyy_A 24 HIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMS 60 (92)
T ss_dssp EEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCC
T ss_pred CEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCC
Confidence 8999999999999999989999999999999999443
No 145
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.98 E-value=1.7e-09 Score=58.14 Aligned_cols=37 Identities=24% Similarity=0.430 Sum_probs=34.3
Q ss_pred cEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCc
Q psy12207 23 GIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 23 ~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~ 59 (69)
+++|..+.+++||+++|+|++||+|++|||+++.+++
T Consensus 22 gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~ 58 (81)
T 2rcz_A 22 HIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMS 58 (81)
T ss_dssp EEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCC
T ss_pred CEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCC
Confidence 7999999999999999889999999999999999443
No 146
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.97 E-value=1.1e-09 Score=60.39 Aligned_cols=48 Identities=27% Similarity=0.410 Sum_probs=39.5
Q ss_pred cCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEc--CCCcc
Q psy12207 4 APIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTV--SKGPT 60 (69)
Q Consensus 4 ~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~--~~~~~ 60 (69)
.|||++.. ...+++|..|.+++||+++| |++||+|++|||+++ .+...
T Consensus 18 ~lG~~~~~--------~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~ 67 (90)
T 2eaq_A 18 DFGFTIKW--------DIPGIFVASVEAGSPAEFSQ-LQVDDEIIAINNTKFSYNDSKE 67 (90)
T ss_dssp CCSEEEEE--------ETTEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECCTTCHHH
T ss_pred cccEEEEe--------cCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEEccCCCHHH
Confidence 46777652 12489999999999999999 999999999999999 44443
No 147
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.97 E-value=1.2e-10 Score=68.37 Aligned_cols=39 Identities=31% Similarity=0.511 Sum_probs=35.2
Q ss_pred CCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 21 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 21 ~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..+++|..|.+++||+++| |++||+|++|||+++.+.+.
T Consensus 60 ~~gv~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~ 98 (126)
T 2yuy_A 60 MDTIFVKQVKEGGPAFEAG-LCTGDRIIKVNGESVIGKTY 98 (126)
T ss_dssp CCCCCBCCCCSSSHHHHHT-CCSSCCCCEETTEECSSCCH
T ss_pred CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 4579999999999999999 99999999999999985543
No 148
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=98.96 E-value=2.1e-09 Score=62.21 Aligned_cols=46 Identities=15% Similarity=0.121 Sum_probs=39.7
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCC
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKG 58 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~ 58 (69)
..+||++.+. .+++|..+.+++||+++| |++||+|++|||+++.+.
T Consensus 34 ~~~G~~l~~~---------~~v~V~~V~~gspA~~AG-L~~GD~Il~VnG~~v~~~ 79 (109)
T 2vsv_A 34 GDLGFTLRGN---------APVQVHFLDPYCSASVAG-AREGDYIVSIQLVDCKWL 79 (109)
T ss_dssp GCCCEEEESS---------SSCEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTC
T ss_pred CceeEEEeCC---------CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCC
Confidence 3577877542 268999999999999999 999999999999999965
No 149
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.96 E-value=2.1e-09 Score=59.08 Aligned_cols=48 Identities=25% Similarity=0.349 Sum_probs=38.3
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~ 59 (69)
..|||++.+..+ ..+++|..+ +++||+ +| |++||+|++|||+++.+.+
T Consensus 14 ~g~G~~~~~~~~------~~~~~v~~v-~~spA~-aG-l~~GD~I~~vng~~v~~~~ 61 (88)
T 3bpu_A 14 MGFGFTIADSPG------GGGQRVKQI-VDSPRS-RG-LKEGDLIVEVNKKNVQALT 61 (88)
T ss_dssp TBSSCEEEECTT------SSSEEEEEC-CC--CC-TT-CCTTCEEEEETTEECTTSC
T ss_pred CceeEEEEecCC------CCcEEEEEe-cCChhH-hC-CCCCCEEEEECCEEcCCCC
Confidence 468999886543 237899887 999999 87 9999999999999999874
No 150
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.96 E-value=2.9e-10 Score=66.25 Aligned_cols=51 Identities=20% Similarity=0.382 Sum_probs=43.3
Q ss_pred cCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCc
Q psy12207 4 APIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 4 ~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~ 59 (69)
.|||++.+.... +..+++|..|.+++||+++| |++||+|++|||+++.+.+
T Consensus 30 ~~G~~v~~~~~~----~~~gv~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~ 80 (114)
T 2d8i_A 30 TYGFSLSSVEED----GIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALN 80 (114)
T ss_dssp CCCCEEEEEEET----TEEEEEEEECCTTSSHHHHT-CCTTCCEEEESSCBGGGCC
T ss_pred ccCEEEEecCcC----CcCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCcC
Confidence 589999874332 11389999999999999999 9999999999999998864
No 151
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.95 E-value=3.6e-10 Score=67.14 Aligned_cols=48 Identities=27% Similarity=0.335 Sum_probs=40.2
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCC
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKG 58 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~ 58 (69)
..|||++.+. ..+++|..|.+++||+++|+|++||+|++|||+++.+.
T Consensus 38 ~glG~~i~~~--------~~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~ 85 (126)
T 1wif_A 38 LGLGLVVIQN--------GPYLQISHLINKGAAASDGILQPGDVLISVGHANVLGY 85 (126)
T ss_dssp TCCCCCEEEE--------TTEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTC
T ss_pred ceEeEEEEcC--------CCcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCC
Confidence 3567766651 24799999999999999999999999999999999643
No 152
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.95 E-value=1.2e-09 Score=67.69 Aligned_cols=50 Identities=16% Similarity=0.298 Sum_probs=42.9
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.++ ..+++|.+|.++|+|+++|+|++||+|++|||+++.+.++
T Consensus 125 ~~lG~~~~~~--------~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~ 174 (206)
T 3r0h_A 125 KELGLSLSPN--------EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPF 174 (206)
T ss_dssp CCCCEEEEEC--------SSCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCH
T ss_pred CccCeEEEcC--------CceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 3578887733 2389999999999999999899999999999999998754
No 153
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=98.94 E-value=1.7e-09 Score=78.30 Aligned_cols=58 Identities=57% Similarity=0.927 Sum_probs=51.5
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.++.+....+...+++|+.|.++|+|+++|+|++||+|++|||+++.+.+.
T Consensus 165 ~~lG~~i~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~ 222 (721)
T 2xkx_A 165 KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMH 222 (721)
T ss_pred CCCceeeccCCCccccCCCCceEEEEeCCCCchhhcCCCCCCCEEEEECCeeCCCCCH
Confidence 3689999999877655556799999999999999999999999999999999998764
No 154
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.92 E-value=1.6e-09 Score=75.85 Aligned_cols=50 Identities=26% Similarity=0.440 Sum_probs=45.0
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.||.. .+++|.+|.++|||+++| |++||+|++|||+++.+.+.
T Consensus 11 ~~lG~~i~gg~~-------~Gi~V~~V~~gspA~~aG-L~~GD~Il~VNG~~v~~~t~ 60 (468)
T 3shw_A 11 DSVGLRLAGGND-------VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIR 60 (468)
T ss_dssp SSCCEEEEEETT-------TEEEEEEECSSSHHHHTT-CCTTEEEEEETTEECTTCCH
T ss_pred CccceEEEccCc-------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 579999998854 389999999999999999 99999999999999998654
No 155
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.91 E-value=1.9e-09 Score=73.76 Aligned_cols=50 Identities=26% Similarity=0.440 Sum_probs=44.4
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.||.+ .+++|.+|.++|||+++| |++||+|++|||+++.+.+.
T Consensus 19 ~~lG~~i~gg~~-------~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~ 68 (391)
T 3tsz_A 19 DSVGLRLAGGND-------VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIR 68 (391)
T ss_dssp SSCCEEEEEETT-------TEEEEEEECTTCHHHHTT-CCTTEEEEEETTEECTTCCH
T ss_pred CceeEEEEecCC-------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 368999998754 389999999999999999 99999999999999988544
No 156
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.90 E-value=3.8e-09 Score=65.44 Aligned_cols=55 Identities=22% Similarity=0.386 Sum_probs=46.1
Q ss_pred cCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCc
Q psy12207 4 APIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 4 ~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~ 59 (69)
.|||.+.+|..... +...+++|.++.+++||+++|+|++||+|++|||+++.+++
T Consensus 118 ~lG~~l~~g~~~~~-~~~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~ 172 (200)
T 2qt5_A 118 TFGFVIRGGAHDDR-NKSRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTT 172 (200)
T ss_dssp BCSEEEEEECCSST-TTCEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCC
T ss_pred CeEEEEECCCCCCc-cCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCC
Confidence 58999998865322 22458999999999999999999999999999999999444
No 157
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.87 E-value=6.9e-10 Score=62.65 Aligned_cols=37 Identities=24% Similarity=0.349 Sum_probs=34.4
Q ss_pred CcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCc
Q psy12207 22 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 22 ~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~ 59 (69)
.+++|..|.+++||+++| |++||+|++|||+++.+.+
T Consensus 36 ~~~~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~ 72 (100)
T 1whd_A 36 SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWK 72 (100)
T ss_dssp SSCBCCBCCTTSHHHHHT-CCSSCEEEEETTEECTTCC
T ss_pred CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCC
Confidence 479999999999999999 9999999999999998754
No 158
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.86 E-value=4.2e-10 Score=63.22 Aligned_cols=46 Identities=20% Similarity=0.282 Sum_probs=39.1
Q ss_pred cCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 4 APIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 4 ~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
.|||.+.+ ..+++|..|.+++||+ +| |++||+|++|||+++.+.+.
T Consensus 22 ~~G~~l~~---------~~~~~V~~V~~~spA~-ag-L~~GD~Il~ing~~v~~~~~ 67 (96)
T 2edv_A 22 DYGFHISE---------SLPLTVVAVTAGGSAH-GK-LFPGDQILQMNNEPAEDLSW 67 (96)
T ss_dssp SCSBCCCS---------SSSCBCCCBCSSSSST-TT-SCTTCBEEEESSCBSTTCCH
T ss_pred cccEEEec---------CCCeEEEEECCCCchh-hC-CCCCCEEEEECCEECCCCCH
Confidence 46777765 2489999999999995 76 99999999999999998765
No 159
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.84 E-value=7.8e-09 Score=62.64 Aligned_cols=48 Identities=21% Similarity=0.368 Sum_probs=42.4
Q ss_pred cCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 4 APIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 4 ~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
.|||++... +.+++|..+.+++||+++| |++||+|++|||+++.+.+.
T Consensus 17 ~lG~~~~~~--------~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~ 64 (166)
T 1w9e_A 17 KIGLRLKSI--------DNGIFVQLVQANSPASLVG-LRFGDQVLQINGENCAGWSS 64 (166)
T ss_dssp CCSEEEEEE--------TTEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCH
T ss_pred cEeEEEEeC--------CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 578877752 2489999999999999999 99999999999999998876
No 160
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=98.83 E-value=1.2e-08 Score=59.71 Aligned_cols=47 Identities=26% Similarity=0.270 Sum_probs=38.7
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||+|.++.. +.+|.++.+ +++.+| |++||+|++|||++++++++
T Consensus 23 ~G~GFsI~~~~~--------g~~V~~I~~--~~~~aG-L~~GD~Il~VNG~~v~~~~h 69 (113)
T 3soe_A 23 KGFGFAIADSPT--------GQKVKMILD--SQWCQG-LQKGDIIKEIYHQNVQNLTH 69 (113)
T ss_dssp TBSSEEEEEETT--------EEEEEEESC--GGGSTT-CCTTCEEEEETTEECTTSCH
T ss_pred CcccEEEeCCCC--------CcEEEEecC--hHHhCC-CCCCCEEEEECCEECCCCCH
Confidence 478999975432 567999988 566676 99999999999999999875
No 161
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.82 E-value=1e-08 Score=59.15 Aligned_cols=45 Identities=27% Similarity=0.417 Sum_probs=37.5
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcC
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVS 56 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~ 56 (69)
.++||.+.. .+.+.+|.+|.++|||+++| |++||+|++|||+++.
T Consensus 28 ~g~G~~l~~--------~~~~~~I~~V~~gSpA~~AG-L~~GD~I~~Ing~~v~ 72 (101)
T 3qik_A 28 EDYGFDIEE--------KNKAVVVKSVQRGSLAEVAG-LQVGRKIYSINEDLVF 72 (101)
T ss_dssp SSSSEEEEE--------ETTEEEEEEECTTSHHHHHT-CCTTCBEEEETTEEST
T ss_pred CcccEEEEc--------cCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEEcC
Confidence 345666653 22378999999999999999 9999999999999985
No 162
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.76 E-value=3.7e-09 Score=61.70 Aligned_cols=51 Identities=20% Similarity=0.362 Sum_probs=42.2
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~ 59 (69)
..|||++.+..+ ..+++|..+.+++||+++|.|++||+|++|||+++.+++
T Consensus 20 ~glG~~~~~~~~------~~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~ 70 (127)
T 1b8q_A 20 GGLGFLVKERVS------KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLS 70 (127)
T ss_dssp SCCSCCEEECTT------SSCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSC
T ss_pred CcEeEEEEecCC------CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCC
Confidence 357887776543 248999999999999999933999999999999999843
No 163
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.75 E-value=2.7e-09 Score=61.70 Aligned_cols=35 Identities=14% Similarity=0.172 Sum_probs=32.7
Q ss_pred cEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCC
Q psy12207 23 GIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKG 58 (69)
Q Consensus 23 ~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~ 58 (69)
+++|..+.+++||+++| |++||+|++|||+++.+.
T Consensus 37 ~v~V~~V~~~spA~~aG-L~~GD~Il~InG~~v~~~ 71 (111)
T 1vae_A 37 PVQVHFLDPHCSASLAG-AKEGDYIVSIQGVDCKWL 71 (111)
T ss_dssp SCEECCCCTTSSHHHHH-CCTTCEEEEETTEECSSC
T ss_pred CEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCC
Confidence 68999999999999999 999999999999999943
No 164
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.75 E-value=1e-08 Score=64.53 Aligned_cols=39 Identities=18% Similarity=0.326 Sum_probs=36.4
Q ss_pred CcEEEEEeCCCChhhccCCCCCC-CEEEEECCEEcCCCccc
Q psy12207 22 NGIYVTKIMDGGAAQVDGRLQVG-DKLIAVRNSTVSKGPTL 61 (69)
Q Consensus 22 ~~i~I~~v~~~g~a~~~grl~~g-D~il~vng~~~~~~~~~ 61 (69)
.+++|..|.++|||+++| |++| |+|++|||+++.+.+.+
T Consensus 16 ~G~~V~~V~~~SpA~~AG-L~~G~D~I~~ing~~v~~~~~~ 55 (209)
T 3rle_A 16 EGYHVLRVQENSPGHRAG-LEPFFDFIVSINGSRLNKDNDT 55 (209)
T ss_dssp EEEEEEEECTTSHHHHTT-CCTTTEEEEEETTEECCSSSSH
T ss_pred CEEEEEEECCCCHHHHCC-CCcCCeEEEEECCEECcCHHHH
Confidence 489999999999999999 9999 99999999999987764
No 165
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.75 E-value=4.2e-09 Score=71.73 Aligned_cols=55 Identities=16% Similarity=0.267 Sum_probs=44.3
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.+..... ...+++|..+.++|||+++|+|++||+|++|||+++.+++.
T Consensus 216 e~lG~~i~~~~~g~---~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~ 270 (388)
T 3suz_A 216 EILGVVVVESGWGS---ILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPL 270 (388)
T ss_dssp CCCCCCCBCC---C---CSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCS
T ss_pred CceeEEEEecCCCC---cCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCH
Confidence 36889888843211 22368999999999999999999999999999999998854
No 166
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.74 E-value=8.2e-09 Score=65.90 Aligned_cols=50 Identities=14% Similarity=0.301 Sum_probs=42.8
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~ 59 (69)
..|||++.++.+. .+++|..|.+++||+++| |+.||+|++|||+++.+++
T Consensus 20 ~glG~~l~~~~~~------~gv~V~~V~~gSpA~~aG-L~~GD~Il~VNG~~V~~~s 69 (216)
T 2krg_A 20 SGYGFNLHSDKSK------PGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQ 69 (216)
T ss_dssp SSSCEEECCCSSS------CSCBEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCC
T ss_pred CCceEEEEecCCC------CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCC
Confidence 3688888876542 379999999999999999 9999999999999998443
No 167
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.73 E-value=2.6e-08 Score=61.60 Aligned_cols=52 Identities=23% Similarity=0.371 Sum_probs=44.0
Q ss_pred cCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCC
Q psy12207 4 APIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKG 58 (69)
Q Consensus 4 ~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~ 58 (69)
.|||++....... ...+++|.++.+++||+++|+|++||+|++|||+++.+.
T Consensus 120 ~lG~~~~~~~~~~---~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~ 171 (196)
T 1p1d_A 120 ELGITISSPSSRK---PGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSC 171 (196)
T ss_dssp CCCCEEECSCSSS---TTCCCEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGGC
T ss_pred CcCEEEECCCCCC---CCCCEEEEEECCCCcHHhcCCCCCCCEEEEECCEECCCC
Confidence 5788887754432 235899999999999999999999999999999999884
No 168
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.71 E-value=5e-08 Score=54.71 Aligned_cols=47 Identities=23% Similarity=0.285 Sum_probs=37.7
Q ss_pred CcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 3 IAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 3 ~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..|||++.+.. .+++|..+.+. |+++| |++||+|++|||+++.+++.
T Consensus 21 ~g~G~~i~~~~--------~Gv~V~~v~~~--a~~aG-L~~GD~I~~vng~~v~~~~~ 67 (96)
T 1ujv_A 21 QGFGFTIADSP--------TGQRVKQILDI--QGCPG-LCEGDLIVEINQQNVQNLSH 67 (96)
T ss_dssp SSSSEEEEEET--------TEEEEEEESCG--GGSTT-CCSSCEEEEETTEECSSCCH
T ss_pred CceeEEEEcCC--------CCEEEEEEecc--cccCC-CCCCCEEEEECCEECCCCCH
Confidence 46788886322 27999999983 67787 99999999999999998743
No 169
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.71 E-value=7.1e-09 Score=60.53 Aligned_cols=52 Identities=8% Similarity=0.141 Sum_probs=40.9
Q ss_pred cCceEEecCCCCCCCCCCCcEEEEEeCC--CChhhccCCCCCCCEEEEECCEEcCCC
Q psy12207 4 APIYNIAGGIGNQHIPGDNGIYVTKIMD--GGAAQVDGRLQVGDKLIAVRNSTVSKG 58 (69)
Q Consensus 4 ~lG~~i~GG~~~~~~~~~~~i~I~~v~~--~g~a~~~grl~~gD~il~vng~~~~~~ 58 (69)
.+||.+.-.... .....+++|..|.+ ++||+++| |++||+|++|||+++.+.
T Consensus 28 ~~G~~v~l~~~~--~~~~~gv~V~~V~~~~~spA~~aG-L~~GD~Il~Vng~~v~~~ 81 (118)
T 2yub_A 28 RRGFSVTVESAS--SNYATTVQVKEVNRMHISPNNRNA-IHPGDRILEINGTPVRTL 81 (118)
T ss_dssp SCSSEEEEECTT--SSSCCEEEEEECCTTTSCTTHHHH-CCTTCCEEEESSSBTTTS
T ss_pred CceEEEEecccc--ccCCCcEEEEEecCCCCChHHHcC-CCCCCEEEEECCEECCCc
Confidence 357776622111 12235899999999 99999999 999999999999999988
No 170
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.70 E-value=1.6e-08 Score=57.83 Aligned_cols=40 Identities=25% Similarity=0.540 Sum_probs=36.4
Q ss_pred CCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCccc
Q psy12207 21 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPTL 61 (69)
Q Consensus 21 ~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~~ 61 (69)
..+++|..+.++|||+++| |++||.|++|||+++.+...+
T Consensus 34 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~ 73 (113)
T 2pzd_A 34 QHGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQNAEDV 73 (113)
T ss_dssp SSCEEEEEEBTTSHHHHHT-CCTTCEEEEETTEECCSHHHH
T ss_pred CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCHHHH
Confidence 4589999999999999999 999999999999999876653
No 171
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=98.66 E-value=2.5e-08 Score=56.98 Aligned_cols=40 Identities=28% Similarity=0.526 Sum_probs=36.4
Q ss_pred CCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCccc
Q psy12207 21 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPTL 61 (69)
Q Consensus 21 ~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~~ 61 (69)
..+++|..+.+++||+++| |++||+|++|||+++.+...+
T Consensus 34 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~ 73 (112)
T 2p3w_A 34 SSGIYVQEVAPNSPSQRGG-IQDGDIIVKVNGRPLVDSSEL 73 (112)
T ss_dssp CSSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCSHHHH
T ss_pred CCCeEEEEECCCChHHHCC-CCCCCEEEEECCEECCCHHHH
Confidence 4589999999999999999 999999999999999887653
No 172
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.66 E-value=3.1e-08 Score=55.89 Aligned_cols=39 Identities=21% Similarity=0.370 Sum_probs=35.1
Q ss_pred CCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCccc
Q psy12207 21 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPTL 61 (69)
Q Consensus 21 ~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~~ 61 (69)
..+++|..+.+++||+. | |++||+|++|||+++.+...+
T Consensus 6 ~~Gv~V~~V~~~spA~~-G-L~~GD~I~~Ing~~v~~~~dl 44 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAAD-V-LHAGDLITEIDGNAFKSSQEF 44 (100)
T ss_dssp CCCEEEEEECTTSGGGG-T-CCTTCEEEEETTBCCSSHHHH
T ss_pred CCCEEEEEeCCCCchHH-C-CCCCCEEEEECCEECCCHHHH
Confidence 45899999999999995 7 999999999999999887653
No 173
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.64 E-value=1e-08 Score=57.47 Aligned_cols=39 Identities=21% Similarity=0.477 Sum_probs=35.1
Q ss_pred CCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCccc
Q psy12207 21 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPTL 61 (69)
Q Consensus 21 ~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~~ 61 (69)
..+++|..+.++|||++ | |++||+|++|||+++.+...+
T Consensus 4 ~~Gv~V~~V~~~spA~~-G-L~~GD~Il~InG~~v~~~~~l 42 (94)
T 2kl1_A 4 AKGVYVMSVLPNMPAAG-R-LEAGDRIAAIDGQPINTSEQI 42 (94)
T ss_dssp CCCEECCCCCTTSTTBT-T-BCTTCEEEEETTBCCCCHHHH
T ss_pred CCcEEEEEECCCChHHh-C-CCCCCEEEEECCEECCCHHHH
Confidence 45899999999999998 8 999999999999999887653
No 174
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.61 E-value=4.5e-08 Score=57.98 Aligned_cols=40 Identities=18% Similarity=0.274 Sum_probs=36.0
Q ss_pred CCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcccc
Q psy12207 21 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPTLG 62 (69)
Q Consensus 21 ~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~~~ 62 (69)
..+++|..+.++|||+ +| |++||+|++|||+++.+...+.
T Consensus 56 ~~g~~V~~V~~~spA~-aG-L~~GD~I~~inG~~v~~~~~l~ 95 (134)
T 2l97_A 56 TSGVIVRSVQSNMPAN-GH-LEKYDVITKVDDKEIASSTDLQ 95 (134)
T ss_dssp CSCEEEEECSTTSGGG-TT-SCSSCEEEEETTEECCCHHHHH
T ss_pred CCCEEEEEECCCCchH-HC-CCCCCEEEEECCEEcCCHHHHH
Confidence 3589999999999999 99 9999999999999999876643
No 175
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.56 E-value=6.5e-09 Score=58.21 Aligned_cols=37 Identities=27% Similarity=0.529 Sum_probs=33.4
Q ss_pred cEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCccc
Q psy12207 23 GIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPTL 61 (69)
Q Consensus 23 ~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~~ 61 (69)
+++|..|.++|||++ | |++||+|++|||+++.+...+
T Consensus 2 Gv~V~~V~~~spA~~-G-L~~GD~I~~InG~~v~~~~~l 38 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-K-IEVGDKIISADGKNYQSAEKL 38 (91)
T ss_dssp CSSCCCCCCSSCCSS-C-CCSSCEEEEETTBCCSSHHHH
T ss_pred ceEEEEECCCChHHH-c-CCCCCEEEEECCEECCCHHHH
Confidence 678899999999999 8 999999999999999877654
No 176
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.56 E-value=2.9e-08 Score=54.67 Aligned_cols=38 Identities=24% Similarity=0.219 Sum_probs=34.5
Q ss_pred cEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCccc
Q psy12207 23 GIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPTL 61 (69)
Q Consensus 23 ~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~~ 61 (69)
++.|..+.|++||+++| |++||.|++|||+++.+...+
T Consensus 20 G~~V~~~~~~s~A~~aG-l~~GD~I~~ing~~v~~~~d~ 57 (87)
T 2i6v_A 20 GYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTDPNVM 57 (87)
T ss_dssp EEEEEECSCHHHHHHTT-CCTTCEEEEETTEETTCHHHH
T ss_pred EEEEEeCCCCCHHHHCC-CCCCCEEEEECCEECCCHHHH
Confidence 67888899999999999 999999999999999987664
No 177
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.56 E-value=4.8e-08 Score=54.82 Aligned_cols=38 Identities=18% Similarity=0.124 Sum_probs=34.0
Q ss_pred EEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcccc
Q psy12207 24 IYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPTLG 62 (69)
Q Consensus 24 i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~~~ 62 (69)
-+|..|.+++||+++| |++||+|++|||+.+.+...+.
T Consensus 4 p~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~d~~ 41 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQ-IAPGTELKAVDGIETPDWDAVR 41 (95)
T ss_dssp CBEEEECTTSHHHHTT-CCTTCEEEEETTEECSSHHHHH
T ss_pred CEEEeeCCCCHHHHcC-CCCCCEEEEECCEECCCHHHHH
Confidence 3688999999999999 9999999999999999876643
No 178
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.50 E-value=3.6e-08 Score=54.25 Aligned_cols=38 Identities=24% Similarity=0.397 Sum_probs=33.8
Q ss_pred cEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCccc
Q psy12207 23 GIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPTL 61 (69)
Q Consensus 23 ~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~~ 61 (69)
+++|..+.+++||+++| |+.||+|++|||+++.+...+
T Consensus 5 ~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~ 42 (91)
T 2zpm_A 5 EPVLENVQPNSAASXAG-LQAGDRIVXVDGQPLTQWVTF 42 (91)
T ss_dssp -CBCSEECTTSHHHHTT-CCTTCEEEEETTEECCCHHHH
T ss_pred CeEEEEECCCChHHhcC-CCCCCEEEEECCeEcCCHHHH
Confidence 46789999999999999 999999999999999887653
No 179
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.41 E-value=2.2e-07 Score=52.72 Aligned_cols=39 Identities=23% Similarity=0.217 Sum_probs=34.3
Q ss_pred cEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcccc
Q psy12207 23 GIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPTLG 62 (69)
Q Consensus 23 ~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~~~ 62 (69)
++.|....|++||+++| |++||+|++|||+++.+...+.
T Consensus 38 G~~V~~~~pas~A~~aG-l~~GDvI~~ing~~v~~~~d~~ 76 (105)
T 2i4s_A 38 GYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTDPNVMN 76 (105)
T ss_dssp EEEEEECSCTHHHHHHT-CCTTCEEEEETTEETTSTTHHH
T ss_pred EEEEecCCCCCHHHHcC-CCCCCEEEEECCEECCCHHHHH
Confidence 56788888888889999 9999999999999999887643
No 180
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=98.39 E-value=2.1e-07 Score=62.48 Aligned_cols=41 Identities=17% Similarity=0.455 Sum_probs=37.4
Q ss_pred CCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcccc
Q psy12207 21 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPTLG 62 (69)
Q Consensus 21 ~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~~~ 62 (69)
..+++|..|.+++||+++| |++||+|++|||+++.+...|.
T Consensus 262 ~~G~~V~~V~~~spA~~aG-L~~GDvI~~ing~~v~~~~~l~ 302 (345)
T 3stj_A 262 QRGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLNSFAELR 302 (345)
T ss_dssp CSSEEEEEECTTSHHHHHT-CCTTCEECEETTEECSCHHHHH
T ss_pred CceEEEEEeccCChHHHcC-CCCCCEEEEECCEECCCHHHHH
Confidence 3589999999999999999 9999999999999999877644
No 181
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=98.38 E-value=3.1e-07 Score=60.67 Aligned_cols=40 Identities=30% Similarity=0.399 Sum_probs=36.5
Q ss_pred CCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCccc
Q psy12207 21 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPTL 61 (69)
Q Consensus 21 ~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~~ 61 (69)
..+++|..|.+++||+++| |++||+|++|||+++.+...+
T Consensus 243 ~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~l 282 (318)
T 1te0_A 243 LQGIVVNEVSPDGPAANAG-IQVNDLIISVDNKPAISALET 282 (318)
T ss_dssp CCCEEEEEECTTSTTTTTC-CCTTCCEEEETTEECCCHHHH
T ss_pred CCcEEEEEeCCCChHHHCC-CCCCCEEEEECCEEcCCHHHH
Confidence 3589999999999999999 999999999999999886654
No 182
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.38 E-value=6.2e-07 Score=61.73 Aligned_cols=41 Identities=27% Similarity=0.447 Sum_probs=36.9
Q ss_pred CCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcccc
Q psy12207 21 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPTLG 62 (69)
Q Consensus 21 ~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~~~ 62 (69)
..+++|..+.+++||+++| |++||+|++|||+++.+...+.
T Consensus 362 ~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~ 402 (436)
T 4a8c_A 362 GKGIKIDEVVKGSPAAQAG-LQKDDVIIGVNRDRVNSIAEMR 402 (436)
T ss_pred CCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCHHHHH
Confidence 3589999999999999999 9999999999999998876643
No 183
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=98.37 E-value=6.2e-07 Score=52.76 Aligned_cols=41 Identities=17% Similarity=0.241 Sum_probs=36.2
Q ss_pred CCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcccc
Q psy12207 20 GDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPTLG 62 (69)
Q Consensus 20 ~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~~~ 62 (69)
...+++|..+.+++||+++ |++||+|++|||+++.+...+.
T Consensus 23 ~~~gv~V~~V~~~spA~~a--L~~GD~Il~InG~~v~~~~dl~ 63 (125)
T 2hga_A 23 QPDGVQIDSVVPGSPASKV--LTPGLVIESINGMPTSNLTTYS 63 (125)
T ss_dssp CCCCEEEEEECSSSGGGGT--SCTTCEEEEETTEECSSHHHHH
T ss_pred CCCceEEEEECCCChHHHh--cCCCCEEEEECCEEcCCHHHHH
Confidence 3458999999999999998 9999999999999999876543
No 184
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=98.36 E-value=3.7e-07 Score=60.61 Aligned_cols=41 Identities=24% Similarity=0.494 Sum_probs=37.3
Q ss_pred CCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcccc
Q psy12207 21 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPTLG 62 (69)
Q Consensus 21 ~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~~~ 62 (69)
..+++|..|.+++||+++| |++||+|++|||+++.+...+.
T Consensus 255 ~~gv~V~~V~~~spA~~aG-l~~GDvI~~ing~~v~~~~~l~ 295 (325)
T 1lcy_A 255 QHGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQNAEDVY 295 (325)
T ss_dssp SSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCSHHHHH
T ss_pred CCCeEEEEeCcCChHHHCC-CCCCCEEEEECCEEcCCHHHHH
Confidence 3589999999999999999 9999999999999999876644
No 185
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.34 E-value=1.1e-06 Score=53.05 Aligned_cols=35 Identities=17% Similarity=0.238 Sum_probs=32.7
Q ss_pred EEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 25 YVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 25 ~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
+|..+.+++||+++| |++||+|++||++++.+.+.
T Consensus 110 ~v~~v~~~s~a~~aG-l~~GD~I~~ing~~v~~~~~ 144 (166)
T 1w9e_A 110 KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKD 144 (166)
T ss_dssp EEEEECTTSHHHHTT-CCSSEEEEEETTEECTTCCH
T ss_pred EEEEEccCCHHHHcC-CCCCCEEEEECCEECCCCCh
Confidence 899999999999999 99999999999999988754
No 186
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.34 E-value=5.2e-07 Score=56.64 Aligned_cols=39 Identities=21% Similarity=0.245 Sum_probs=35.0
Q ss_pred CcEEEEEeCCCChhhccCCCCC-CCEEEEECCEEcCCCcccc
Q psy12207 22 NGIYVTKIMDGGAAQVDGRLQV-GDKLIAVRNSTVSKGPTLG 62 (69)
Q Consensus 22 ~~i~I~~v~~~g~a~~~grl~~-gD~il~vng~~~~~~~~~~ 62 (69)
.+++|..|.++|||+++| |++ ||+|++||++ +.+...+.
T Consensus 112 ~Gv~V~~V~~~spA~~aG-l~~~GD~I~~ing~-v~~~~~l~ 151 (209)
T 3rle_A 112 NVWHVLEVESNSPAALAG-LRPHSDYIIGADTV-MNESEDLF 151 (209)
T ss_dssp SCEEEEEECTTSHHHHHT-CCTTTEEEEEESSC-CCSSSCHH
T ss_pred cceEEEEeCCCChHHHCC-CCCCCCEEEECCCE-eCCHHHHH
Confidence 489999999999999999 999 9999999998 87776643
No 187
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=98.34 E-value=4.1e-07 Score=60.09 Aligned_cols=40 Identities=23% Similarity=0.399 Sum_probs=36.6
Q ss_pred CCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCccc
Q psy12207 21 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPTL 61 (69)
Q Consensus 21 ~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~~ 61 (69)
..+++|..+.+++||+++| |++||+|++|||+++.+...+
T Consensus 241 ~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~l 280 (324)
T 1y8t_A 241 TLGAKIVEVVAGGAAANAG-VPKGVVVTKVDDRPINSADAL 280 (324)
T ss_dssp SSSEEEEEECTTSTTTTTT-CCTTCEEEEETTEECCSHHHH
T ss_pred CCceEEEEECCCChHHHcC-CCCCCEEEEECCEECCCHHHH
Confidence 4589999999999999999 999999999999999987654
No 188
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.31 E-value=6e-07 Score=61.80 Aligned_cols=41 Identities=17% Similarity=0.455 Sum_probs=37.2
Q ss_pred CCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcccc
Q psy12207 21 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPTLG 62 (69)
Q Consensus 21 ~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~~~ 62 (69)
..+++|..|.++|||+++| |+.||+|++|||+++.+...+.
T Consensus 262 ~~G~~V~~V~~~spA~~aG-L~~GD~I~~vnG~~v~~~~~l~ 302 (436)
T 4a8c_A 262 QRGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLNSFAELR 302 (436)
T ss_pred CcceEEEEECCCChHHHCC-CCCCCEEEEECCEECCCHHHHH
Confidence 3589999999999999999 9999999999999999876643
No 189
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=98.26 E-value=7.4e-07 Score=61.74 Aligned_cols=40 Identities=18% Similarity=0.483 Sum_probs=37.0
Q ss_pred CcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcccc
Q psy12207 22 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPTLG 62 (69)
Q Consensus 22 ~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~~~ 62 (69)
.+++|..|.++|||+++| |+.||+|++|||+++.+...+.
T Consensus 282 ~G~~V~~V~~~spA~~aG-L~~GDvI~~vnG~~v~~~~~l~ 321 (451)
T 3pv2_A 282 QGALVSQVNPNSPAELAG-LKAGDIITQINDTKITQATQVK 321 (451)
T ss_dssp CCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCSHHHHH
T ss_pred ceEEEEecCCCChHHHcC-CCCCCEEEEECCEEcCCHHHHH
Confidence 589999999999999999 9999999999999999877643
No 190
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=98.25 E-value=2.1e-06 Score=59.00 Aligned_cols=36 Identities=19% Similarity=0.376 Sum_probs=33.7
Q ss_pred cEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCc
Q psy12207 23 GIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 23 ~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~ 59 (69)
.++|..|.++|||+++| |++||+|++|||+++.+..
T Consensus 91 ~~~V~~V~~gsPA~~AG-L~~GD~I~~InG~~v~~~~ 126 (403)
T 3k50_A 91 NALISYVVPGSPAEEAG-LQRGHWIMMMNGDYITKKV 126 (403)
T ss_dssp EEEEEEECTTSHHHHTT-CCTTCEEEEETTBCBCTTT
T ss_pred eEEEEEeCCCChHHHcC-CCCCCEEEEECCEEccchh
Confidence 47999999999999999 9999999999999998765
No 191
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.25 E-value=1.2e-07 Score=64.57 Aligned_cols=35 Identities=26% Similarity=0.568 Sum_probs=0.0
Q ss_pred EEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 25 YVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 25 ~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
+|..+.++|+|+++| |++||+|++|||+++.+.+.
T Consensus 318 ~I~~V~~gs~A~~aG-L~~GD~Il~VNg~~v~~~s~ 352 (388)
T 3suz_A 318 IICSLMRGGIAERGG-VRVGHRIIEINGQSVVATAH 352 (388)
T ss_dssp ------------------------------------
T ss_pred EEEEeecCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 889999999999999 99999999999999976543
No 192
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.24 E-value=1.2e-06 Score=59.34 Aligned_cols=38 Identities=24% Similarity=0.394 Sum_probs=35.2
Q ss_pred CCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCc
Q psy12207 21 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGP 59 (69)
Q Consensus 21 ~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~ 59 (69)
+.+++|..+.+++||+++| |++||+|++|||+++.+.+
T Consensus 98 ~~~~~V~~v~~~spA~~aG-l~~GD~I~~Ing~~v~~~~ 135 (388)
T 1fc6_A 98 GKDVVVLTPAPGGPAEKAG-ARAGDVIVTVDGTAVKGMS 135 (388)
T ss_dssp SSCEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCC
T ss_pred CCcEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCC
Confidence 3589999999999999999 9999999999999999863
No 193
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=98.23 E-value=1.2e-06 Score=58.55 Aligned_cols=40 Identities=35% Similarity=0.500 Sum_probs=37.1
Q ss_pred CcEEEEEeCCCChhhccCCCCC-----------CCEEEEECCEEcCCCcccc
Q psy12207 22 NGIYVTKIMDGGAAQVDGRLQV-----------GDKLIAVRNSTVSKGPTLG 62 (69)
Q Consensus 22 ~~i~I~~v~~~g~a~~~grl~~-----------gD~il~vng~~~~~~~~~~ 62 (69)
.+++|..+.+++||+++| |++ ||+|++|||+++.+...+.
T Consensus 251 ~Gv~V~~V~~~spA~~AG-l~~~~~~~~~~l~~GDvI~~ing~~v~~~~dl~ 301 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAG-LQSTKRDGYGRLVLGDIITSVNGTKVSNGSDLY 301 (348)
T ss_dssp SSEEEEECCSSSHHHHHT-CCCCEECSSSCEECCCEECEETTBCCSSSHHHH
T ss_pred ceEEEEEecCCChHHHcC-CccccccccCCCCCCCEEEEECCEEeCCHHHHH
Confidence 589999999999999999 999 9999999999999887644
No 194
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=98.18 E-value=2.6e-06 Score=60.93 Aligned_cols=34 Identities=29% Similarity=0.495 Sum_probs=32.2
Q ss_pred CcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcC
Q psy12207 22 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVS 56 (69)
Q Consensus 22 ~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~ 56 (69)
.+++|..|.++|||+++| |++||+|++|||++++
T Consensus 496 ~gv~V~~V~~~spA~~AG-L~~GD~I~aInG~~v~ 529 (597)
T 4fgm_A 496 QGLDVLNVYHDESAYHAG-LSAGDKIIAIDHLQAT 529 (597)
T ss_dssp TEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECC
T ss_pred CeEEEEEeCCCChHHHCC-CCCCCEEEEECCEECC
Confidence 378999999999999999 9999999999999994
No 195
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=98.15 E-value=1.5e-06 Score=60.26 Aligned_cols=40 Identities=23% Similarity=0.337 Sum_probs=36.4
Q ss_pred CcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcccc
Q psy12207 22 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPTLG 62 (69)
Q Consensus 22 ~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~~~ 62 (69)
.+++|..+.+++||+++| |++||+|++||++++.+...+.
T Consensus 386 ~Gv~V~~V~~gspA~~aG-L~~GD~I~~Vng~~v~~~~~~~ 425 (451)
T 3pv2_A 386 IGVQVVGASENSAGWRAG-IRPGDIIISANKKPVTDVKSLQ 425 (451)
T ss_dssp EEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCSHHHHH
T ss_pred CceEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCHHHHH
Confidence 489999999999999999 9999999999999999876543
No 196
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=98.12 E-value=3.4e-07 Score=60.79 Aligned_cols=40 Identities=20% Similarity=0.484 Sum_probs=0.0
Q ss_pred CcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcccc
Q psy12207 22 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPTLG 62 (69)
Q Consensus 22 ~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~~~ 62 (69)
.+++|..|.+++||+++| |++||+|++|||+++.+...+.
T Consensus 254 ~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~ 293 (332)
T 3num_A 254 SGAYIIEVIPDTPAEAGG-LKENDVIISINGQSVVSANDVS 293 (332)
T ss_dssp -----------------------------------------
T ss_pred CceEEEEeccCCChHHcC-CCCCCEEEEECCEECCCHHHHH
Confidence 589999999999999999 9999999999999998776643
No 197
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=97.94 E-value=1.6e-06 Score=59.97 Aligned_cols=40 Identities=20% Similarity=0.464 Sum_probs=36.9
Q ss_pred CcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcccc
Q psy12207 22 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPTLG 62 (69)
Q Consensus 22 ~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~~~ 62 (69)
.+++|.+|.+++||+++| |++||+|++|||+++.+...+.
T Consensus 286 ~G~~V~~V~~gspA~~AG-L~~GDvI~~inG~~v~~~~~l~ 325 (448)
T 1ky9_A 286 RGAFVSQVLPNSSAAKAG-IKAGDVITSLNGKPISSFAALR 325 (448)
T ss_dssp CSEECCCCTTCSSSTTTT-CCTTCEECBSSSSBCCSSHHHH
T ss_pred CceEEEEeccCCHHHHcC-CCCCCEEEEECCEEcCCHHHHH
Confidence 589999999999999999 9999999999999999887643
No 198
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=97.75 E-value=3.8e-06 Score=58.10 Aligned_cols=40 Identities=28% Similarity=0.423 Sum_probs=0.0
Q ss_pred CcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcccc
Q psy12207 22 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPTLG 62 (69)
Q Consensus 22 ~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~~~ 62 (69)
.+++|..|.+++||+++| |++||+|++||++++.+...+.
T Consensus 383 ~gv~V~~V~~gspA~~aG-L~~GDiI~~vng~~v~~~~~l~ 422 (448)
T 1ky9_A 383 QGVVVNNVKTGTPAAQIG-LKKGDVIIGANQQAVKNIAELR 422 (448)
T ss_dssp -----------------------------------------
T ss_pred CeEEEEEecCCCHHHHcC-CCCCCEEEEECCEECCCHHHHH
Confidence 478999999999999999 9999999999999998776644
No 199
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=97.58 E-value=0.00013 Score=51.95 Aligned_cols=38 Identities=21% Similarity=0.326 Sum_probs=33.3
Q ss_pred CCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCcc
Q psy12207 21 DNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 21 ~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~ 60 (69)
..+++|..|.++|||+++ |+.||.|+++||+.+.+...
T Consensus 276 ~~Gv~V~~V~~~spA~~a--l~~GDvI~~idg~~V~~~g~ 313 (539)
T 4fln_A 276 NEGVLVRRVEPTSDASKV--LKEGDVIVSFDDLHVGCEGT 313 (539)
T ss_dssp SBCEEEEEECTTSGGGGT--CCTTCEEEEETTEECBSSSE
T ss_pred cCceeeecccCCChHHhC--ccCCCEEEEECCEEeCcCCe
Confidence 359999999999999864 99999999999999976543
No 200
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.47 E-value=7.6e-05 Score=54.79 Aligned_cols=39 Identities=21% Similarity=0.228 Sum_probs=34.3
Q ss_pred CCcEEEEEeCCC--------ChhhccC-CCCCCCEEEEECCEEcCCCcc
Q psy12207 21 DNGIYVTKIMDG--------GAAQVDG-RLQVGDKLIAVRNSTVSKGPT 60 (69)
Q Consensus 21 ~~~i~I~~v~~~--------g~a~~~g-rl~~gD~il~vng~~~~~~~~ 60 (69)
+.+++|..+.++ +||+++| .|+ ||+|++|||+++.+...
T Consensus 747 ~~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~~ 794 (1045)
T 1k32_A 747 GDHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGSN 794 (1045)
T ss_dssp TTEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTBC
T ss_pred CCEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchhh
Confidence 357999999998 9999998 489 99999999999987754
No 201
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=97.39 E-value=0.00022 Score=50.77 Aligned_cols=44 Identities=5% Similarity=0.055 Sum_probs=39.3
Q ss_pred CCCCcEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCCCccccc
Q psy12207 19 PGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPTLGY 63 (69)
Q Consensus 19 ~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~~~~~~~ 63 (69)
.++.+++|++|.+++++...+ ++.||+|++||++++.+..+|.+
T Consensus 412 ~~~~gVvvs~V~~~s~a~~~g-~~~gdiI~~vNg~~V~s~~~l~~ 455 (539)
T 4fln_A 412 RGEQIVILSQVLANEVNIGYE-DMNNQQVLKFNGIPIRNIHHLAH 455 (539)
T ss_dssp TTCCCEEEEEECCCGGGTTCS-SCCSEEEEEETTEECCSHHHHHH
T ss_pred CCceEEEEEEecCCchhhhcC-CCCCCEEEeECCEEcCCHHHHHH
Confidence 355689999999999999999 99999999999999999888543
No 202
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=73.41 E-value=5.3 Score=28.89 Aligned_cols=30 Identities=30% Similarity=0.534 Sum_probs=21.9
Q ss_pred cEEEEEeCCCChhhccCCCCCCCEEEEECCEEcCC
Q psy12207 23 GIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSK 57 (69)
Q Consensus 23 ~i~I~~v~~~g~a~~~grl~~gD~il~vng~~~~~ 57 (69)
.+||+.+..... + +..||+|++|||+++.+
T Consensus 97 ~i~V~dv~~~~s----~-I~vGdEIlsING~pv~e 126 (583)
T 3dor_A 97 RFYFVDIMTFSS----E-IRVGDELLEVDGAPVQD 126 (583)
T ss_dssp CEEEEEECSSCC----S-SCTTCEEEEETTEEHHH
T ss_pred cEEEEecccccc----C-CCCCCEEEEECCccHHH
Confidence 477766533222 3 99999999999999864
No 203
>2j3t_D Trafficking protein particle complex subunit 4; trapp, palmitate, transport, lipoprotein, ER-golgi transport apparatus, protein transport; HET: PLM; 2.4A {Homo sapiens} PDB: 2zmv_A 2jsn_A
Probab=42.19 E-value=26 Score=22.17 Aligned_cols=23 Identities=30% Similarity=0.557 Sum_probs=20.3
Q ss_pred hhccCCCCCCCEEEEECCEEcCCC
Q psy12207 35 AQVDGRLQVGDKLIAVRNSTVSKG 58 (69)
Q Consensus 35 a~~~grl~~gD~il~vng~~~~~~ 58 (69)
.+++| +..|..++++||.++...
T Consensus 52 ~~~d~-~~~~~~~~~~ng~~~~~~ 74 (219)
T 2j3t_D 52 GQRDG-IRVGHAVLAINGMDVNGR 74 (219)
T ss_dssp CCCTT-CCTTCEEEEETTEECBTT
T ss_pred cccCC-ccccceeeecCCccCCCc
Confidence 56788 999999999999999864
No 204
>3c9u_A Thiamine monophosphate kinase; beta barrel, alpha-beta structure, transferase; HET: TPP ADP; 1.48A {Aquifex aeolicus} SCOP: d.79.4.1 d.139.1.1 PDB: 3c9r_A* 3c9t_A* 3c9s_A* 1vqv_A
Probab=39.12 E-value=8.2 Score=25.52 Aligned_cols=48 Identities=15% Similarity=0.195 Sum_probs=28.0
Q ss_pred CCcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEEC
Q psy12207 2 CIAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVR 51 (69)
Q Consensus 2 ~~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vn 51 (69)
|+.+|+.+.||-.....+-...+.+.-+ ++.+..+.+ .++||.|+-..
T Consensus 144 ~~~~gv~lvGGdT~~~~~~~i~vt~vG~-~~~~l~~~~-a~~GD~IivtG 191 (342)
T 3c9u_A 144 CEFYKCEVVGGNISKSEKIGISVFLVGE-TERFVGRDG-ARLGDSVFVSG 191 (342)
T ss_dssp HHHHTCEEEEEEEEECSSCEEEEEEEEE-ESSCCCSSC-CCTTCEEEEES
T ss_pred HHHcCCeEEeeEeeecCCeEEEEEEEEe-cCccccccC-CCCCCEEEEEC
Confidence 5567888888865433111112333334 444445565 89999998765
No 205
>1efp_A ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3 c.31.1.2
Probab=38.93 E-value=57 Score=21.28 Aligned_cols=33 Identities=15% Similarity=0.356 Sum_probs=29.6
Q ss_pred CCCcEEEEEeCCCChhhccCCCCCCCEEEEECCE
Q psy12207 20 GDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNS 53 (69)
Q Consensus 20 ~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~ 53 (69)
-.+.+||.-=+.|..-|.+| ++--+.|++||.-
T Consensus 247 V~P~lYiA~GISGAiQHlaG-m~~s~~IVAIN~D 279 (307)
T 1efp_A 247 VAPELYVAVGISGAIQHLAG-MKDSKVIVAINKD 279 (307)
T ss_dssp CCCSEEEEESCCCCHHHHTT-TTTCSEEEEEESC
T ss_pred cCCceEEEEeccCcHHHHhh-hccCCEEEEEeCC
Confidence 34489999999999999999 9999999999963
No 206
>1efv_A Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 c.31.1.2 PDB: 2a1u_A* 1t9g_R* 2a1t_R*
Probab=37.93 E-value=59 Score=21.30 Aligned_cols=33 Identities=12% Similarity=0.371 Sum_probs=29.6
Q ss_pred CCCcEEEEEeCCCChhhccCCCCCCCEEEEECCE
Q psy12207 20 GDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNS 53 (69)
Q Consensus 20 ~~~~i~I~~v~~~g~a~~~grl~~gD~il~vng~ 53 (69)
-.+.+||.-=+.|..-|.+| ++--+.|++||.-
T Consensus 252 V~P~lYiA~GISGAiQHlaG-m~~s~~IVAIN~D 284 (315)
T 1efv_A 252 VAPELYIAVGISGAIQHLAG-MKDSKTIVAINKD 284 (315)
T ss_dssp CCCSEEEEESCCCCHHHHTT-TTTCSEEEEEESC
T ss_pred cCcceEEEecccCcHHHHhh-cccCCEEEEEeCC
Confidence 34489999999999999999 9999999999963
No 207
>2yyd_A Selenide, water dikinase; FULL-length selenophosphate synthetase, structural genomics, NPPSFA; 1.98A {Aquifex aeolicus} PDB: 2yye_A* 2zod_A 2zau_A
Probab=33.94 E-value=13 Score=24.54 Aligned_cols=49 Identities=22% Similarity=0.184 Sum_probs=27.9
Q ss_pred CCcCceEEecCCCCCCCCCCCcEEEEEeCCC-ChhhccCCCCCCCEEEEEC
Q psy12207 2 CIAPIYNIAGGIGNQHIPGDNGIYVTKIMDG-GAAQVDGRLQVGDKLIAVR 51 (69)
Q Consensus 2 ~~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~-g~a~~~grl~~gD~il~vn 51 (69)
|+.+|..+.||--.........+.+.-+.+. -+..+.+ .++||.|+-..
T Consensus 130 ~~~~gv~lvGGdt~~~~~~~i~~t~vG~v~~~~~~~~~~-a~~GD~Iivtg 179 (345)
T 2yyd_A 130 LREAKTVLLGGHTIDDKEPKFGLSVAGICPEGKYITQSG-AQVGQLLILTK 179 (345)
T ss_dssp HHHTTCEEEEEEEEECSSCEEEEEEEEECGGGCCCCSSC-CCTTCEEEECS
T ss_pred HHHcCCEEEeeEcccCCCceEEEEEEEEEcCCceecCCC-CCCCCEEEEEC
Confidence 5667889999864332111112333344443 3344455 89999998654
No 208
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=30.82 E-value=40 Score=21.46 Aligned_cols=22 Identities=18% Similarity=0.398 Sum_probs=11.4
Q ss_pred CChhhccCCCCCCCEEEEECCE
Q psy12207 32 GGAAQVDGRLQVGDKLIAVRNS 53 (69)
Q Consensus 32 ~g~a~~~grl~~gD~il~vng~ 53 (69)
++++.+.+.++.||+++-+.+.
T Consensus 1 ~~~~~~~~~~~~Gd~V~~~~~~ 22 (336)
T 2b25_A 1 GSSTSRERPFQAGELILAETGE 22 (336)
T ss_dssp -------CCCCTTCEEEEEC--
T ss_pred CCCcccCCCCCCCCEEEEEeCC
Confidence 3566677779999999988653
No 209
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=29.83 E-value=21 Score=19.88 Aligned_cols=18 Identities=39% Similarity=0.473 Sum_probs=12.8
Q ss_pred CChhhccCCCCCCCEEEEEC
Q psy12207 32 GGAAQVDGRLQVGDKLIAVR 51 (69)
Q Consensus 32 ~g~a~~~grl~~gD~il~vn 51 (69)
.|+|++ ..++||.++=+.
T Consensus 48 NGAAAr--l~~~GD~vII~a 65 (96)
T 1vc3_B 48 NGAAAH--LVKPGDLVILVA 65 (96)
T ss_dssp EGGGGG--TCCTTCEEEEEE
T ss_pred chHHHc--cCCCCCEEEEEE
Confidence 367766 478999997544
No 210
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=28.62 E-value=22 Score=19.89 Aligned_cols=18 Identities=33% Similarity=0.608 Sum_probs=12.8
Q ss_pred CChhhccCCCCCCCEEEEEC
Q psy12207 32 GGAAQVDGRLQVGDKLIAVR 51 (69)
Q Consensus 32 ~g~a~~~grl~~gD~il~vn 51 (69)
.|+|++ ..++||.++=+.
T Consensus 46 NGAAAr--l~~~GD~vII~a 63 (97)
T 1uhe_A 46 NGAAAR--KVAIGDVVIILA 63 (97)
T ss_dssp EGGGGG--GCCTTCEEEEEE
T ss_pred chHHHc--cCCCCCEEEEEE
Confidence 467766 478999997544
No 211
>1pqh_A Aspartate 1-decarboxylase; pyruvoyl dependent decarboxylase, protein SELF-processing; 1.29A {Escherichia coli} SCOP: b.52.2.1 PDB: 1pqf_A 1pt1_A 1pt0_A 1pyq_A 1ppy_A 1pqe_A 1pyu_B 3tm7_B 1aw8_B 1pyu_A 3tm7_A 1aw8_A
Probab=28.24 E-value=39 Score=20.12 Aligned_cols=20 Identities=35% Similarity=0.328 Sum_probs=14.0
Q ss_pred CCCChhhccCCCCCCCEEEEEC
Q psy12207 30 MDGGAAQVDGRLQVGDKLIAVR 51 (69)
Q Consensus 30 ~~~g~a~~~grl~~gD~il~vn 51 (69)
.-.|+|++ ..++||.|+=+.
T Consensus 87 ~lNGAAAr--l~~~GD~VII~s 106 (143)
T 1pqh_A 87 SVNGAAAH--CASVGDIVIIAS 106 (143)
T ss_dssp ECCGGGGG--TCCTTCEEEEEE
T ss_pred EechHHHc--cCCCCCEEEEEE
Confidence 44567766 478999997543
No 212
>3mcq_A Thiamine-monophosphate kinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE PGE PG4 1PE; 1.91A {Methylobacillus flagellatus}
Probab=28.07 E-value=17 Score=23.56 Aligned_cols=47 Identities=9% Similarity=0.001 Sum_probs=27.8
Q ss_pred CCcCceEEecCCCCCCCCCCCcEEEEEeCC-CChhhccCCCCCCCEEEEE
Q psy12207 2 CIAPIYNIAGGIGNQHIPGDNGIYVTKIMD-GGAAQVDGRLQVGDKLIAV 50 (69)
Q Consensus 2 ~~~lG~~i~GG~~~~~~~~~~~i~I~~v~~-~g~a~~~grl~~gD~il~v 50 (69)
|+.+|..+.||-..... -...+.+.-+.+ +-+..+.+ .++||.|+-.
T Consensus 108 ~~~~g~~lvGGdt~~~~-~~i~~t~iG~v~~~~~~~~~~-a~~GD~ii~t 155 (319)
T 3mcq_A 108 AAQFDIALIGGDTTRGP-LTISVQIMGETPPGASLLRST-ARADDDIWVS 155 (319)
T ss_dssp HHHTTCEEEEEEEEESS-CEEEEEEEEEECTTCCCCSSC-CCTTEEEEEC
T ss_pred HHHcCCeEEeeEcCCCC-eEEEEEEEEeeCCCcccccCC-CCCCCEEEEE
Confidence 56678899998654321 112233344444 33445565 9999999764
No 213
>3plx_B Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta-barrel; 1.75A {Campylobacter jejuni subsp}
Probab=28.00 E-value=23 Score=20.00 Aligned_cols=18 Identities=44% Similarity=0.597 Sum_probs=12.9
Q ss_pred CChhhccCCCCCCCEEEEEC
Q psy12207 32 GGAAQVDGRLQVGDKLIAVR 51 (69)
Q Consensus 32 ~g~a~~~grl~~gD~il~vn 51 (69)
.|+|++ ..++||+++=+.
T Consensus 47 NGAAAr--l~~~GD~vII~a 64 (102)
T 3plx_B 47 NGAAAR--LAEVGDKVIIMS 64 (102)
T ss_dssp EGGGGG--GCCTTCEEEEEE
T ss_pred CcHHHh--ccCCCCEEEEEE
Confidence 467766 478999997543
No 214
>2z1e_A Hydrogenase expression/formation protein HYPE; [NIFE] hydrogenase maturation, ATPase, transferase; 1.55A {Thermococcus kodakarensis} SCOP: d.79.4.1 d.139.1.1 PDB: 2z1f_A
Probab=27.60 E-value=24 Score=22.86 Aligned_cols=46 Identities=17% Similarity=0.139 Sum_probs=26.5
Q ss_pred CCcCceEEecCCCCCCCCCCCcEEEE----EeCCCChhhccCCCCCCCEEEEE
Q psy12207 2 CIAPIYNIAGGIGNQHIPGDNGIYVT----KIMDGGAAQVDGRLQVGDKLIAV 50 (69)
Q Consensus 2 ~~~lG~~i~GG~~~~~~~~~~~i~I~----~v~~~g~a~~~grl~~gD~il~v 50 (69)
|+.+|..+.||-........ ++.++ -+.+... .+.+ .++||.|+-.
T Consensus 121 ~~~~g~~lvGGdt~~~~~~~-~~~i~~t~~G~v~~~~-~~~~-a~~GD~i~vt 170 (338)
T 2z1e_A 121 AREVPVPIVTGDTKVVEDKI-EMFVITAGIGIAEHPV-SDAG-AKVGDAVLVS 170 (338)
T ss_dssp HHHTTCCEEEEEEEEESSSC-CEEEEEEEEEEESSCC-CTTC-CCTTCEEEES
T ss_pred HHHcCCEEECcEEEEcCCCC-ceEEEEEEEEEECCcc-CccC-CCCCCEEEEE
Confidence 56678888888654321111 44443 2333334 4555 8999998854
No 215
>3bbo_O Ribosomal protein L16; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.2
Probab=27.10 E-value=48 Score=19.30 Aligned_cols=24 Identities=13% Similarity=0.122 Sum_probs=18.2
Q ss_pred CChhhccCCCCCCCEEEEECCEEc
Q psy12207 32 GGAAQVDGRLQVGDKLIAVRNSTV 55 (69)
Q Consensus 32 ~g~a~~~grl~~gD~il~vng~~~ 55 (69)
|.|-+-..++++|..|+++.+.+.
T Consensus 88 G~~~~wva~Vk~G~ilfEi~gv~~ 111 (135)
T 3bbo_O 88 GSPEYWVAVVKPGRILYEISGVAE 111 (135)
T ss_dssp SCSSCCCCCCCTTCEEEEECSSCT
T ss_pred CCceEEEEEECCCCEEEEEecCCH
Confidence 345555667999999999999443
No 216
>2yxz_A Thiamin-monophosphate kinase; alpha/beta structure, transferase; 1.90A {Thermus thermophilus}
Probab=25.99 E-value=22 Score=22.69 Aligned_cols=47 Identities=17% Similarity=0.002 Sum_probs=26.2
Q ss_pred CCcCceEEecCCCCCCCCCCCcEEEEEeCCCChhhccCCCCCCCEEEEEC
Q psy12207 2 CIAPIYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVR 51 (69)
Q Consensus 2 ~~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~g~a~~~grl~~gD~il~vn 51 (69)
|+.+|+.+.||-.... ...-+-++-..+....-..+ .++||.|+-..
T Consensus 112 ~~~~g~~lvGG~t~~~--~~~~i~~tG~v~~~~~~~~~-a~~GD~i~~~g 158 (311)
T 2yxz_A 112 AKRLGAFLLGGDTNRG--VEVALTVSGYALAEAPLPRK-ALPGDLLYLAG 158 (311)
T ss_dssp HHHTTCEEEEEEEEEC--SSCEEEEEEEEEESSCCCSC-CCTTCEEEEES
T ss_pred HHHcCCeEEceecCCC--CCcEEEEEeeeCCCCccccC-CCCCCEEEEeC
Confidence 5678999999976443 11123333222222111244 79999987764
No 217
>1o97_D Electron transferring flavoprotein alpha-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 c.31.1.2 PDB: 1o95_D* 1o96_B* 1o94_D* 3clu_D* 3clt_D* 3clr_D* 3cls_D*
Probab=25.63 E-value=72 Score=20.93 Aligned_cols=33 Identities=21% Similarity=0.362 Sum_probs=29.8
Q ss_pred CCC-cEEEEEeCCCChhhccCCCCCCCEEEEECCE
Q psy12207 20 GDN-GIYVTKIMDGGAAQVDGRLQVGDKLIAVRNS 53 (69)
Q Consensus 20 ~~~-~i~I~~v~~~g~a~~~grl~~gD~il~vng~ 53 (69)
-.+ .+||.-=+.|..-|.+| ++--+.|++||.-
T Consensus 257 V~P~~lYiA~GISGAiQHlaG-m~~s~~IVAIN~D 290 (320)
T 1o97_D 257 VGSCKLYVAMGISGSIQHMAG-MKHVPTIIAVNTD 290 (320)
T ss_dssp CTTCSEEEEESCCCCHHHHHH-HTTCSEEEEECSC
T ss_pred ecccceEEEEeccCcHHHHhh-cccCCEEEEEeCC
Confidence 456 79999999999999999 9999999999963
No 218
>3fd5_A Selenide, water dikinase 1; selenophosphate synthetase, SELD, ATP-binding, nucleotide-binding, selenium, transferase; HET: AP2; 1.90A {Homo sapiens} PDB: 3fd6_A*
Probab=24.13 E-value=17 Score=24.49 Aligned_cols=49 Identities=16% Similarity=0.038 Sum_probs=27.2
Q ss_pred CCcCceEEecCCCCCCCCCCCcEEEEEeCC-CChhhccCCCCCCCEEEEEC
Q psy12207 2 CIAPIYNIAGGIGNQHIPGDNGIYVTKIMD-GGAAQVDGRLQVGDKLIAVR 51 (69)
Q Consensus 2 ~~~lG~~i~GG~~~~~~~~~~~i~I~~v~~-~g~a~~~grl~~gD~il~vn 51 (69)
|+.+|..+.||--.......-++.+.-+.+ +-+..+.+ .++||.|+-..
T Consensus 154 ~~~~gv~lvGGdT~~~p~~~i~~t~~G~v~~~~~l~~~~-a~~GD~Iiltg 203 (394)
T 3fd5_A 154 AEEAGTSVTGGQTVLNPWIVLGGVATTVCQPNEFIMPDN-AVPGDVLVLTK 203 (394)
T ss_dssp HHHTTCCEEEEEEEEESSCEEEEEEEEEECGGGCCCTTC-CCTTCEEEESS
T ss_pred HHHhCCcEEeeeEEEcCCcEEEEEEEEEEcCCceecCCC-CCCCCEEEEEC
Confidence 556788888886433211111223344444 33444555 89999998543
No 219
>2zod_A Selenide, water dikinase; FULL-length selenophosphate synthetase, transferase, ATP- binding, magnesium, nucleotide-binding, selenium; 1.98A {Aquifex aeolicus} SCOP: d.79.4.1 d.139.1.1 PDB: 2yye_A 2zau_A
Probab=22.94 E-value=26 Score=22.81 Aligned_cols=47 Identities=23% Similarity=0.172 Sum_probs=26.1
Q ss_pred CCcCceEEecCCCCCCCCCCCcEEEEEeCCC-ChhhccCCCCCCCEEEE
Q psy12207 2 CIAPIYNIAGGIGNQHIPGDNGIYVTKIMDG-GAAQVDGRLQVGDKLIA 49 (69)
Q Consensus 2 ~~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~-g~a~~~grl~~gD~il~ 49 (69)
|+..|..+.||--.........+.+.-+.+. ....+.+ .++||.|+-
T Consensus 130 ~~~~gv~lvGGdt~~~~~~~i~~t~~G~~~~~~~~~~~~-a~~GD~iiv 177 (345)
T 2zod_A 130 LREAKTVLLGGHTIDDKEPKFGLSVAGICPEGKYITQSG-AQVGQLLIL 177 (345)
T ss_dssp HHHTTCEEEEEEEEECSSCEEEEEEEEECGGGCCCCSSC-CCTTCEEEE
T ss_pred HHhccCcccCCceEECCcCcccceeEEEecCcccccccc-CCCCCeEEE
Confidence 4567888888853222111113344444443 3444555 899999974
No 220
>3oug_A Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta barrel; HET: MSE; 1.55A {Francisella tularensis subsp} SCOP: b.52.2.0
Probab=22.57 E-value=33 Score=19.72 Aligned_cols=18 Identities=33% Similarity=0.656 Sum_probs=12.7
Q ss_pred CChhhccCCCCCCCEEEEEC
Q psy12207 32 GGAAQVDGRLQVGDKLIAVR 51 (69)
Q Consensus 32 ~g~a~~~grl~~gD~il~vn 51 (69)
.|+|++ ..++||+|+=+.
T Consensus 75 NGAAAr--~~~~GD~vII~a 92 (114)
T 3oug_A 75 NGPAAR--RCEIGDQLFIIS 92 (114)
T ss_dssp EGGGGG--GCCTTCEEEEEE
T ss_pred CCHHHh--ccCCCCEEEEEE
Confidence 367766 478999997543
No 221
>3pjy_A Hypothetical signal peptide protein; DUF192 family protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.55A {Sinorhizobium meliloti}
Probab=22.04 E-value=31 Score=20.04 Aligned_cols=24 Identities=29% Similarity=0.448 Sum_probs=16.6
Q ss_pred cEEEEEeCCCChhhccCCCCCCCEEE
Q psy12207 23 GIYVTKIMDGGAAQVDGRLQVGDKLI 48 (69)
Q Consensus 23 ~i~I~~v~~~g~a~~~grl~~gD~il 48 (69)
.-||-.+.. |.+++.| +++||+|.
T Consensus 102 a~~VLEl~a-G~~~~~g-i~~Gd~v~ 125 (136)
T 3pjy_A 102 VAYVLELNA-GTVKRLG-VSPGDRLE 125 (136)
T ss_dssp EEEEEEEET-THHHHHT-CCTTCEEE
T ss_pred eeEEEEeCc-ChHHhcC-CCCCCEEE
Confidence 446666655 4555566 99999985
No 222
>3u0o_A Selenide, water dikinase; ATP binding protein, selenophosphate synthesis, transferase; 2.25A {Escherichia coli}
Probab=21.79 E-value=19 Score=23.74 Aligned_cols=49 Identities=24% Similarity=0.232 Sum_probs=25.6
Q ss_pred CCcCceEEecCCCCCCCCCCCcEEEEEeCCC-ChhhccCCCCCCCEEEEEC
Q psy12207 2 CIAPIYNIAGGIGNQHIPGDNGIYVTKIMDG-GAAQVDGRLQVGDKLIAVR 51 (69)
Q Consensus 2 ~~~lG~~i~GG~~~~~~~~~~~i~I~~v~~~-g~a~~~grl~~gD~il~vn 51 (69)
|+.+|..+.||--.......-.+.+.-+.+. -+..+.+ .++||.|+-..
T Consensus 129 ~~~~gv~lvGGdt~~~~~~~~~~t~vG~v~~~~~~~~~~-a~~GD~iiltg 178 (347)
T 3u0o_A 129 CRQAGIALAGGHSIDAPEPIFGLAVTGIVPTERVKKNST-AQAGCKLFLTK 178 (347)
T ss_dssp HHHTTCCEEEEEEEECSSCEEEEEEEEEEEGGGCCCSSC-CCTTCEEEESS
T ss_pred HHHcCCEEEcceeccCCCcEEEEEEEEEECCcceecCCC-CCCCCEEEEeC
Confidence 4567888888864332111112222223332 2334455 89999998543
Done!