RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy12207
(69 letters)
>d2fe5a1 b.36.1.1 (A:223-314) Synapse-associated protein 102
{Human (Homo sapiens) [TaxId: 9606]}
Length = 92
Score = 46.1 bits (109), Expect = 4e-09
Identities = 35/48 (72%), Positives = 44/48 (91%)
Query: 8 NIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTV 55
+IAGGIGNQHIPGDN IY+TKI++GGAAQ DGRLQ+GD+L+AV N+ +
Sbjct: 17 SIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNL 64
>d2h3la1 b.36.1.1 (A:1310-1412) Erbin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 103
Score = 45.2 bits (107), Expect = 1e-08
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 8 NIAGGIG---NQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTV 55
+I+GG+G N P D+GI+VT++ G A LQ GDK+I +
Sbjct: 26 SISGGVGGRGNPFRPDDDGIFVTRVQPEGPA--SKLLQPGDKIIQANGYSF 74
>d1ujda_ b.36.1.1 (A:) Hypothetical protein KIAA0559 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 117
Score = 45.3 bits (107), Expect = 1e-08
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 8 NIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVS 56
I GG G+ G Y+ KI+ GG+A+ G+L G +++ ++
Sbjct: 35 RIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLT 83
>d1rgra_ b.36.1.1 (A:) Synaptic protein PSD-95 {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 93
Score = 44.9 bits (106), Expect = 1e-08
Identities = 24/48 (50%), Positives = 31/48 (64%)
Query: 8 NIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTV 55
+IAGG N HI D I++TKI+ GGAA DGRL+V D ++ V V
Sbjct: 17 SIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDV 64
>d2csja1 b.36.1.1 (A:8-111) Tight junction protein ZO-2, Tjp2
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 104
Score = 43.0 bits (101), Expect = 7e-08
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 8 NIAGGIGNQHIP-GDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVS 56
++GG N H G+ I ++ ++ GG A DG LQ D+++ V + +
Sbjct: 24 AVSGGRDNPHFENGETSIVISDVLPGGPA--DGLLQENDRVVMVNGTPME 71
>d1wi4a1 b.36.1.1 (A:8-103) Syntaxin binding protein 4 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 96
Score = 41.1 bits (96), Expect = 4e-07
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 8 NIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAV 50
I GGI +Y+ +++ GG DGRL+ GD+L+++
Sbjct: 23 KILGGINRNE---GPLVYIHEVIPGGDCYKDGRLKPGDQLVSI 62
>d1wf8a1 b.36.1.1 (A:8-101) Neurabin-i {Human (Homo sapiens)
[TaxId: 9606]}
Length = 94
Score = 40.2 bits (94), Expect = 8e-07
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 11 GGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTV 55
G+G GI+V + +GGAAQ DGR+QV D+++ V ++
Sbjct: 22 MGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISL 66
>d2cssa1 b.36.1.1 (A:8-115) Regulating synaptic membrane
exocytosis protein 1, RIMS1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 108
Score = 39.5 bits (92), Expect = 2e-06
Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Query: 8 NIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTV 55
+ GG G G ++TK+ G A V G L+ GD+++ +
Sbjct: 35 KVVGGKMTDL--GRLGAFITKVKKGSLADVVGHLRAGDEVLEWNGKPL 80
>d1i16a_ b.36.1.2 (A:) Interleukin 16 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 130
Score = 40.0 bits (93), Expect = 2e-06
Identities = 12/48 (25%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 8 NIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTV 55
++ GG G+ H GD + + +I G A++ +Q GD+++ + + +
Sbjct: 45 SLEGGKGSLH--GDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAM 90
>d2fcfa1 b.36.1.1 (A:1148-1243) Multiple PDZ domain protein {Human
(Homo sapiens) [TaxId: 9606]}
Length = 96
Score = 39.1 bits (91), Expect = 2e-06
Identities = 12/53 (22%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Query: 8 NIAGGIGNQHIP----GDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVS 56
+I GG G GI++ +++ A +G L+ GD+++ V +
Sbjct: 18 SIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLR 70
>d1wg6a_ b.36.1.1 (A:) Partitioning-defective 3-like protein,
PAR3-L (RIKEN cDNA 2810455b10) {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 127
Score = 39.7 bits (92), Expect = 2e-06
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 8 NIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTV 55
++ G ++ D GI++ I+ GGAA DGRL++ D+LIAV T+
Sbjct: 42 SLKGNK-SRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETL 88
>d1t2ma1 b.36.1.1 (A:2-93) Afadin {Human (Homo sapiens) [TaxId:
9606]}
Length = 92
Score = 39.1 bits (91), Expect = 2e-06
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 8 NIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTV 55
+I G GIYV ++ GGAA VDGRL GD+L++V ++
Sbjct: 19 SIVAAKGAGQ--DKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSL 64
>d1wh1a_ b.36.1.1 (A:) Hypothetical protein KIAA1095 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 124
Score = 38.8 bits (90), Expect = 4e-06
Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 8 NIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAV 50
+ + D GIY+++I A DGR++ GD++I +
Sbjct: 37 TVCYRTDD---EDDIGIYISEIDPNSIAAKDGRIREGDRIIQI 76
>d2fnea1 b.36.1.1 (A:1955-2042) Multiple PDZ domain protein {Human
(Homo sapiens) [TaxId: 9606]}
Length = 88
Score = 38.3 bits (89), Expect = 4e-06
Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 8 NIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTV 55
+I GG G+ H GD IYV + GAA DGRL+ GD++IAV ++
Sbjct: 18 SIVGGYGSPH--GDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSL 63
>d1ihja_ b.36.1.1 (A:) Inad {Fruit fly (Drosophila melanogaster)
[TaxId: 7227]}
Length = 94
Score = 38.3 bits (89), Expect = 5e-06
Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 8 NIAGGIG-NQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVS 56
I G + GI++ I+ A + GRL+VGD+++++ V
Sbjct: 20 CIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVR 69
>d1v6ba_ b.36.1.1 (A:) Harmonin {Mouse (Mus musculus) [TaxId:
10090]}
Length = 118
Score = 38.5 bits (89), Expect = 5e-06
Identities = 12/48 (25%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 8 NIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTV 55
+ GG+ + + V+ + +GGAA+ G + GD+++A+ V
Sbjct: 33 ALEGGVDSPVGK----VVVSAVYEGGAAERHGGVVKGDEIMAINGKIV 76
>d1wifa_ b.36.1.1 (A:) hypothetical PDZ domain containing protein
Uqcrc2 (4930408O21Rik) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 126
Score = 38.5 bits (89), Expect = 6e-06
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 12 GIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTV 55
G+G I + ++ +++ GAA DG LQ GD LI+V ++ V
Sbjct: 39 GLGLVVIQNGPYLQISHLINKGAAASDGILQPGDVLISVGHANV 82
>d2f0aa1 b.36.1.1 (A:251-342) Segment polarity protein dishevelled
homolog Dvl-2 {African clawed frog (Xenopus laevis)
[TaxId: 8355]}
Length = 92
Score = 37.9 bits (88), Expect = 6e-06
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 13 IGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTV 55
+G + GD GIY+ IM GGA DGR++ GD L+ V +
Sbjct: 20 VGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINF 62
>d1whaa_ b.36.1.1 (A:) Scribble (KIAA0147) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 105
Score = 36.9 bits (85), Expect = 2e-05
Identities = 22/49 (44%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 8 NIAGGIGNQ-HIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTV 55
+IAGG G+ + GD GI+V++I +GGAA G LQVGD+++++ V
Sbjct: 23 SIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDV 71
>d1uhpa_ b.36.1.1 (A:) Hypothetical protein KIAA1095 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 107
Score = 36.5 bits (84), Expect = 3e-05
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 8 NIAGGIG---NQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTV 55
NI GG N GI+V+KI+D G A +G LQ+ D++I V +
Sbjct: 24 NIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDL 74
>d1rzxa_ b.36.1.1 (A:) GTPase-binding domain of the cell polarity
protein par6 (Par-6B) {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 98
Score = 36.1 bits (83), Expect = 3e-05
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Query: 8 NIAGGIGNQHIP----GDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTV 55
I G + GI++++++ GG A+ G L V D++I V V
Sbjct: 20 YIRDGTSVRVTASGLEKQPGIFISRLVPGGLAESTGLLAVNDEVIEVNGIEV 71
>d1p1da2 b.36.1.1 (A:115-213) Glutamate receptor interacting
protein {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 99
Score = 36.0 bits (83), Expect = 3e-05
Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Query: 9 IAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTV 55
I+ + + + ++ I G A G L++GDKL+A+ N +
Sbjct: 28 ISSPSSRKP---GDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRL 71
>d1x6da1 b.36.1.2 (A:8-114) Interleukin 16 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 107
Score = 36.1 bits (83), Expect = 4e-05
Identities = 10/48 (20%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 8 NIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTV 55
++AGG + I V ++ G A +G +Q G++++++ ++
Sbjct: 25 SLAGGADL----ENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSL 68
>d1x5qa1 b.36.1.1 (A:8-104) Scribble (KIAA0147) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 97
Score = 35.7 bits (82), Expect = 4e-05
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 8 NIAGGIGNQH-IPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAV 50
+IAGG G+ D GI+++++ + G A ++VGDKL+ V
Sbjct: 24 SIAGGKGSTPYKGDDEGIFISRVSEEGPAARA-GVRVGDKLLEV 66
>d1x5ra1 b.36.1.1 (A:8-106) Glutamate receptor interacting protein
2, GRIP2 (KIAA1719) {Human (Homo sapiens) [TaxId:
9606]}
Length = 99
Score = 35.7 bits (82), Expect = 5e-05
Identities = 12/49 (24%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Query: 8 NIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVS 56
+ GGI + V I A+ G LQVGD+++++
Sbjct: 25 QLQGGIFATE-TLSSPPLVCFIEPDSPAERCGLLQVGDRVLSINGIATE 72
>d1um1a_ b.36.1.1 (A:) Hypothetical protein KIAA1849 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 110
Score = 35.7 bits (82), Expect = 6e-05
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 8 NIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVS 56
+ G+ G G+Y+ ++ G A DGRL +GD+++ V S++
Sbjct: 24 GLIDGMHTHL--GAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLL 70
>d1q3oa_ b.36.1.1 (A:) Shank1, PDZ domain {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 104
Score = 35.4 bits (81), Expect = 7e-05
Identities = 14/56 (25%), Positives = 21/56 (37%), Gaps = 8/56 (14%)
Query: 7 YNIAGGIGNQHI-------PGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTV 55
+ + G I Y+ + +GG A G L++GD LI V V
Sbjct: 21 FVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNV 75
>d1ufxa_ b.36.1.1 (A:) KIAA1526 protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 103
Score = 35.3 bits (81), Expect = 7e-05
Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 4/49 (8%)
Query: 8 NIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVS 56
I GG + I GG+A G+L+VG ++ V T+
Sbjct: 22 AIEGGANT----RQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLR 66
>d1ueqa_ b.36.1.1 (A:) Membrane associated guanylate kinase
inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 123
Score = 35.7 bits (82), Expect = 7e-05
Identities = 12/48 (25%), Positives = 21/48 (43%), Gaps = 5/48 (10%)
Query: 8 NIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTV 55
I GG D + V ++ G A DG+++ GD ++ + V
Sbjct: 35 TIIGGDEP-----DEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCV 77
>d1v5qa_ b.36.1.1 (A:) Glutamate receptor interacting protein
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 122
Score = 35.0 bits (80), Expect = 1e-04
Identities = 9/43 (20%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 8 NIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAV 50
+ G + + ++ I A+ G LQ+GD+++A+
Sbjct: 32 QLQGSVFATE-TLSSPPLISYIEADSPAERCGVLQIGDRVMAI 73
>d1n7ea_ b.36.1.1 (A:) Glutamate receptor-interacting protein 1,
GRIP1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 95
Score = 34.5 bits (79), Expect = 1e-04
Identities = 9/36 (25%), Positives = 23/36 (63%)
Query: 20 GDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTV 55
+ I ++ + GG A+ G + +GD+++A+ +S++
Sbjct: 26 PFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSL 61
>d1ujua_ b.36.1.1 (A:) Scribble (KIAA0147) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 111
Score = 34.6 bits (79), Expect = 2e-04
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 8 NIAGGI----GNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTV 55
+I GG GN P D GI+++K+ GAA DGRL+VG +L+ V ++
Sbjct: 26 SIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSL 77
>d1g9oa_ b.36.1.1 (A:) Na+/H+ exchanger regulatory factor, NHERF
{Human (Homo sapiens) [TaxId: 9606]}
Length = 91
Score = 34.0 bits (78), Expect = 2e-04
Identities = 13/45 (28%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Query: 12 GIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVS 56
G G G Y+ + G A+ G L GD+L+ V V
Sbjct: 17 GFHLHGEKGKLGQYIRLVEPGSPAEKAG-LLAGDRLVEVNGENVE 60
>d1w9ea1 b.36.1.1 (A:110-194) Syntenin 1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 85
Score = 33.7 bits (77), Expect = 2e-04
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 11 GGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAV 50
G IG + DNGI+V + A + G L+ GD+++ +
Sbjct: 14 GKIGLRLKSIDNGIFVQLVQANSPASLVG-LRFGDQVLQI 52
>d1qava_ b.36.1.1 (A:) Syntrophin {Mouse (Mus musculus) [TaxId:
10090]}
Length = 90
Score = 33.7 bits (77), Expect = 2e-04
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Query: 8 NIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVS 56
+I GG N+ I ++KI G AA L VGD +++V +S
Sbjct: 21 SIKGGRENKM-----PILISKIFKGLAADQTEALFVGDAILSVNGEDLS 64
>d2cs5a1 b.36.1.1 (A:8-113) Tyrosine-protein phosphatase
non-receptor type 4, PTPN4 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 106
Score = 33.7 bits (77), Expect = 3e-04
Identities = 10/50 (20%), Positives = 22/50 (44%), Gaps = 6/50 (12%)
Query: 8 NIAGGIGNQHIPGDNGIYVTKIMDGGAAQV-DGRLQVGDKLIAVRNSTVS 56
N+ GG + V+++ G A + RL GD+++ + ++
Sbjct: 25 NVKGGYDQ-----KMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIA 69
>d2f5ya1 b.36.1.1 (A:19-95) Regulator of G-protein signaling 3,
RGS3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 77
Score = 33.3 bits (76), Expect = 3e-04
Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Query: 11 GGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVS 56
G G I D+ + V + GG A+ G LQ D ++ + V
Sbjct: 8 DGFG-FTICCDSPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVE 51
>d1uewa_ b.36.1.1 (A:) Membrane associated guanylate kinase
inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 114
Score = 33.5 bits (76), Expect = 5e-04
Identities = 11/50 (22%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Query: 8 NIAGGIGNQHIP--GDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTV 55
I + + +I+DG A +L+VGD+++AV ++
Sbjct: 27 VIISSLNRPESGSTITVPHKIGRIIDGSPADRCAKLKVGDRILAVNGQSI 76
>d1ozia_ b.36.1.1 (A:) Phosphatase hPTP1e {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 99
Score = 33.0 bits (75), Expect = 5e-04
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 6 IYNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTV 55
+ + G GIYV I+ GAA+ DGR+ GD+++AV ++
Sbjct: 21 VTVLFDKGGVNTSVRHGGIYVKAIIPKGAAESDGRIHKGDRVLAVNGVSL 70
>d1m5za_ b.36.1.1 (A:) Glutamate receptor interacting protein {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 91
Score = 33.0 bits (75), Expect = 6e-04
Identities = 12/49 (24%), Positives = 21/49 (42%), Gaps = 7/49 (14%)
Query: 8 NIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVS 56
++A G+ + G+YV I G G L+ D+L+ V +
Sbjct: 24 SVADGLL------EKGVYVKNIRPAGPGD-LGGLKPYDRLLQVNHVRTR 65
>d1tp5a1 b.36.1.1 (A:302-403) Synaptic protein PSD-95 {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 102
Score = 33.0 bits (75), Expect = 6e-04
Identities = 12/45 (26%), Positives = 23/45 (51%)
Query: 12 GIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVS 56
G GI+++ I+ GG A + G L+ GD++++V +
Sbjct: 23 GFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLR 67
>d1x45a1 b.36.1.1 (A:8-92) Amyloid beta A4 precursor
protein-binding family A member 1 (APBA1, X11) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 85
Score = 32.5 bits (74), Expect = 6e-04
Identities = 10/47 (21%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 9 IAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTV 55
I +P + + +M GG A+ G+L +GD+++++ +++
Sbjct: 16 IVESGWGSILPT---VIIANMMHGGPAEKSGKLNIGDQIMSINGTSL 59
>d1va8a1 b.36.1.1 (A:8-107) Maguk p55 subfamily member 5 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 100
Score = 32.2 bits (73), Expect = 0.001
Identities = 10/46 (21%), Positives = 23/46 (50%)
Query: 11 GGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVS 56
+G + + +++I+ GGAA+ G L GD+++ + +
Sbjct: 30 IPLGATVRNEMDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIR 75
>d1v62a_ b.36.1.1 (A:) Glutamate receptor interacting protein 2,
GRIP2 (KIAA1719) {Human (Homo sapiens) [TaxId: 9606]}
Length = 117
Score = 32.3 bits (73), Expect = 0.001
Identities = 6/40 (15%), Positives = 12/40 (30%), Gaps = 4/40 (10%)
Query: 9 IAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLI 48
+ + I + +I G L GD ++
Sbjct: 33 LTTTSLR----NKSVITIDRIKPASVVDRSGALHPGDHIL 68
>d1kwaa_ b.36.1.1 (A:) Cask/Lin-2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 88
Score = 31.7 bits (72), Expect = 0.002
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 20 GDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVS 56
N V +IM GG G L VGD++ + +V+
Sbjct: 23 ELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVA 59
>d1wfva_ b.36.1.1 (A:) Membrane associated guanylate kinase
inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 103
Score = 31.0 bits (70), Expect = 0.004
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Query: 8 NIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTV 55
+I GG + +YV ++ + G A +GR++VGD++I + +
Sbjct: 27 SIRGGREYKM-----DLYVLRLAEDGPAIRNGRMRVGDQIIEINGEST 69
>d1uepa_ b.36.1.1 (A:) Membrane associated guanylate kinase
inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 103
Score = 30.2 bits (68), Expect = 0.006
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 20 GDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTV 55
I + ++ G+A DGRL GD+L+ V V
Sbjct: 32 PGQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPV 67
>d1qaua_ b.36.1.1 (A:) Neuronal nitric oxide synthase, NNOS {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 112
Score = 28.9 bits (64), Expect = 0.020
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 11 GGIGNQHIPGDN--GIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTV 55
GG+G + + ++ ++ GGAA+ G +Q GD ++AV + +
Sbjct: 13 GGLGFLVKERVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPL 59
>d1uf1a_ b.36.1.1 (A:) KIAA1526 protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 128
Score = 28.4 bits (63), Expect = 0.038
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
Query: 8 NIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAV 50
I GG GIY+T + G A+ L+VGD+++ V
Sbjct: 37 TIRGGAEY-----GLGIYITGVDPGSEAE-GSGLKVGDQILEV 73
>d2z9ia1 b.36.1.4 (A:227-314) Protease PepD {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 88
Score = 28.0 bits (62), Expect = 0.045
Identities = 9/39 (23%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Query: 12 GIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAV 50
G+ + G + +++ GGAA G + G + V
Sbjct: 6 GVQVTNDKDTLGAKIVEVVAGGAAANAG-VPKGVVVTKV 43
>d1ueza_ b.36.1.1 (A:) KIAA1526 protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 101
Score = 26.8 bits (59), Expect = 0.12
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 6/49 (12%)
Query: 8 NIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVS 56
+I GG + GIYV+ + G A+ +G +VGD+++ V + +++
Sbjct: 26 SIRGGSEH-----GVGIYVSLVEPGSLAEKEGL-RVGDQILRVNDKSLA 68
>d1x5na1 b.36.1.1 (A:8-108) Harmonin {Human (Homo sapiens) [TaxId:
9606]}
Length = 101
Score = 26.4 bits (58), Expect = 0.17
Identities = 9/43 (20%), Positives = 22/43 (51%), Gaps = 6/43 (13%)
Query: 8 NIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAV 50
+I+ G GI+++ + G + + L++GD+++ V
Sbjct: 25 SISSGPIQ-----KPGIFISHVKPGSLSA-EVGLEIGDQIVEV 61
>d1wi2a_ b.36.1.1 (A:) PDZ domain containing protein 11, Pdzk11
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 104
Score = 26.5 bits (58), Expect = 0.19
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 7 YNIAGGIGNQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVS 56
+NI GG +Q GI+++K++ A LQ GD+++AV +
Sbjct: 31 FNIRGGKASQL-----GIFISKVIPDSDAH-RAGLQEGDQVLAVNDVDFQ 74
>d2hgaa1 b.36.1.6 (A:23-125) Uncharacterized protein MTH1368
{Methanobacterium thermoautotrophicum [TaxId: 145262]}
Length = 103
Score = 25.7 bits (56), Expect = 0.34
Identities = 7/40 (17%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
Query: 22 NGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPTL 61
+G+ + ++ G A L G + ++ S T
Sbjct: 3 DGVQIDSVVPGSPA--SKVLTPGLVIESINGMPTSNLTTY 40
>d1vaea_ b.36.1.1 (A:) Rhophilin-2 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 111
Score = 25.0 bits (54), Expect = 0.66
Identities = 5/40 (12%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Query: 17 HIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVS 56
+ G+ + V + +A + GD +++++
Sbjct: 31 TLRGNTPVQVHFLDPHCSAS-LAGAKEGDYIVSIQGVDCK 69
>d1a8pa1 b.43.4.2 (A:2-100) Ferredoxin reductase (flavodoxin
reductase) N-terminal domain {Azotobacter vinelandii
[TaxId: 354]}
Length = 99
Score = 24.5 bits (53), Expect = 0.77
Identities = 10/44 (22%), Positives = 18/44 (40%), Gaps = 8/44 (18%)
Query: 19 PGDNG--IYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVSKGPT 60
+ + K+ +G L+ GD+L+ VS+ PT
Sbjct: 58 NYEEHLEFFSIKVQNGPLTSRLQHLKEGDELM------VSRKPT 95
>d1ujva_ b.36.1.1 (A:) Membrane associated guanylate kinase
inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 96
Score = 24.5 bits (53), Expect = 0.80
Identities = 5/33 (15%), Positives = 10/33 (30%)
Query: 23 GIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTV 55
++ Q L GD ++ + V
Sbjct: 30 SPTGQRVKQILDIQGCPGLCEGDLIVEINQQNV 62
>d1vpba_ d.283.1.1 (A:) Putative modulator of DNA gyrase BT3649
{Bacteroides thetaiotaomicron [TaxId: 818]}
Length = 439
Score = 23.4 bits (49), Expect = 3.3
Identities = 7/24 (29%), Positives = 8/24 (33%)
Query: 21 DNGIYVTKIMDGGAAQVDGRLQVG 44
+ GI VT G G G
Sbjct: 357 EKGILVTGFNGGNNNSSTGDFSYG 380
>d1fc6a3 b.36.1.3 (A:157-248) Photosystem II D1 C-terminal
processing protease {Algae (Scenedesmus obliquus)
[TaxId: 3088]}
Length = 92
Score = 22.2 bits (47), Expect = 6.5
Identities = 10/49 (20%), Positives = 17/49 (34%), Gaps = 4/49 (8%)
Query: 11 GGIG---NQHIPGDNGIYVTKIMDGGAAQVDGRLQVGDKLIAVRNSTVS 56
G+G + V GG A+ + GD ++ V + V
Sbjct: 5 TGVGLEITYDGGSGKDVVVLTPAPGGPAE-KAGARAGDVIVTVDGTAVK 52
>d1vdra_ c.71.1.1 (A:) Dihydrofolate reductase, prokaryotic type
{Haloferax volcanii [TaxId: 2246]}
Length = 157
Score = 22.3 bits (47), Expect = 6.5
Identities = 5/28 (17%), Positives = 11/28 (39%), Gaps = 1/28 (3%)
Query: 5 PIYNIAGG-IGNQHIPGDNGIYVTKIMD 31
Y I G I P + + ++++
Sbjct: 95 TAYVIGGAAIYALFQPHLDRMVLSRVPG 122
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.142 0.433
Gapped
Lambda K H
0.267 0.0594 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 249,985
Number of extensions: 8759
Number of successful extensions: 81
Number of sequences better than 10.0: 1
Number of HSP's gapped: 77
Number of HSP's successfully gapped: 62
Length of query: 69
Length of database: 2,407,596
Length adjustment: 37
Effective length of query: 32
Effective length of database: 1,899,586
Effective search space: 60786752
Effective search space used: 60786752
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.2 bits)