BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1221
(690 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6AXC6|DDX11_MOUSE Probable ATP-dependent RNA helicase DDX11 OS=Mus musculus GN=Ddx11
PE=2 SV=1
Length = 880
Score = 252 bits (643), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 187/292 (64%), Gaps = 23/292 (7%)
Query: 399 MPDIEKTQEKPKLSGLQSFLKGVQENNPNLSKPSEGGIEEAPSQVQEDQVR--NPMLSVV 456
+P + +QE L+G Q FLK +Q G E++P + Q +R +P++ +
Sbjct: 490 LPSLSDSQENRGLAGFQQFLKSLQS----------GPTEDSPEEGQAVALRPASPLMHIE 539
Query: 457 TFLESLVNKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVS 516
FL +L N+DGR++V + + +S +K++LLNPA HF +V++ R++++AGGTM+P+S
Sbjct: 540 AFLAALTTANQDGRVIVNRQGSVGQSSLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPMS 599
Query: 517 EFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKE 576
+F++QL GV R+ FSCGHVIP +NILPLI+CSGP+N++ + T++ R ++E
Sbjct: 600 DFREQLLACSGVEAGRVVEFSCGHVIPPDNILPLIICSGPSNQQLEFTYQRRELPQMVEE 659
Query: 577 IAMTITNLCTIVPKGMVCFFPSYDYEAIVYNYMRDNHFIERIARIAKKKVVFREPKKTSE 636
+ NLC +VP G+VCF PSY+Y V+ + + R++ +K +F+EPK+ S+
Sbjct: 660 TGRILCNLCNVVPGGVVCFLPSYEYLRQVHAHWDKTGL---LTRLSVRKKIFQEPKRASQ 716
Query: 637 VDKVLSDYGTSVEK--------GGALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
V++VL Y + GAL+LSV+GGK+SEG+NFSDDLGRCVV++
Sbjct: 717 VEQVLMAYSKCIMSCSHSEGHLTGALLLSVVGGKMSEGINFSDDLGRCVVMV 768
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 133/207 (64%), Gaps = 12/207 (5%)
Query: 195 TQEKPKLSGLQSFLKGVQENNPNLSKPPEGGIEEAPSQVQEDQVR--NPMLSVVTFLESL 252
+QE L+G Q FLK +Q G E++P + Q +R +P++ + FL +L
Sbjct: 496 SQENRGLAGFQQFLKSLQS----------GPTEDSPEEGQAVALRPASPLMHIEAFLAAL 545
Query: 253 VNKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQL 312
N+DGR++V + + +S +K++LLNPA HF +V++ R++++AGGTM+P+S+F++QL
Sbjct: 546 TTANQDGRVIVNRQGSVGQSSLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPMSDFREQL 605
Query: 313 FGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTIT 372
GV R+ FSCGHVIP +NILPLI+CSGP+N++ + T++ R ++E +
Sbjct: 606 LACSGVEAGRVVEFSCGHVIPPDNILPLIICSGPSNQQLEFTYQRRELPQMVEETGRILC 665
Query: 373 NLCTIVPKGMVCFFPSYDYEAIVYNYM 399
NLC +VP G+VCF PSY+Y V+ +
Sbjct: 666 NLCNVVPGGVVCFLPSYEYLRQVHAHW 692
>sp|Q96FC9|DDX11_HUMAN Probable ATP-dependent RNA helicase DDX11 OS=Homo sapiens GN=DDX11
PE=1 SV=1
Length = 970
Score = 252 bits (643), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 119/285 (41%), Positives = 187/285 (65%), Gaps = 18/285 (6%)
Query: 405 TQEKPKLSGLQSFLKGVQ-ENNPNLSKPSEGGIEEAPSQVQEDQVRNPMLSVVTFLESLV 463
++E+PKL+G Q FL+ +Q L+ P++ SQ + +P++ + FL +L
Sbjct: 521 SREQPKLAGFQQFLQSLQPRTTEALAAPAD------ESQASTLRPASPLMHIQGFLAALT 574
Query: 464 NKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLF 523
N+DGR+++++ LS+S +K++LLNPA HF +V++ R++++AGGTM+PVS+F+ QL
Sbjct: 575 TANQDGRVILSRQGSLSQSTLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLL 634
Query: 524 GSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITN 583
GV R+ FSCGHVIP +NILPL++CSG +N+ + TF+ R + E+ + N
Sbjct: 635 ACAGVEAERVVEFSCGHVIPPDNILPLVICSGISNQPLEFTFQKRELPQMMDEVGRILCN 694
Query: 584 LCTIVPKGMVCFFPSYDYEAIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSD 643
LC +VP G+VCFFPSY+Y V+ + + R+A +K +F+EPK +V++VL
Sbjct: 695 LCGVVPGGVVCFFPSYEYLRQVHAHWEKGGL---LGRLAARKKIFQEPKSAHQVEQVLLA 751
Query: 644 YGTSV-----EKG---GALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
Y + E+G GAL+LSV+GGK+SEG+NFSD+LGRCVV++
Sbjct: 752 YSRCIQACGQERGQVTGALLLSVVGGKMSEGINFSDNLGRCVVMV 796
Score = 189 bits (480), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 84/206 (40%), Positives = 134/206 (65%), Gaps = 7/206 (3%)
Query: 195 TQEKPKLSGLQSFLKGVQ-ENNPNLSKPPEGGIEEAPSQVQEDQVRNPMLSVVTFLESLV 253
++E+PKL+G Q FL+ +Q L+ P + SQ + +P++ + FL +L
Sbjct: 521 SREQPKLAGFQQFLQSLQPRTTEALAAPAD------ESQASTLRPASPLMHIQGFLAALT 574
Query: 254 NKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLF 313
N+DGR+++++ LS+S +K++LLNPA HF +V++ R++++AGGTM+PVS+F+ QL
Sbjct: 575 TANQDGRVILSRQGSLSQSTLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLL 634
Query: 314 GSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITN 373
GV R+ FSCGHVIP +NILPL++CSG +N+ + TF+ R + E+ + N
Sbjct: 635 ACAGVEAERVVEFSCGHVIPPDNILPLVICSGISNQPLEFTFQKRELPQMMDEVGRILCN 694
Query: 374 LCTIVPKGMVCFFPSYDYEAIVYNYM 399
LC +VP G+VCFFPSY+Y V+ +
Sbjct: 695 LCGVVPGGVVCFFPSYEYLRQVHAHW 720
>sp|Q92771|DDX12_HUMAN Putative ATP-dependent RNA helicase DDX12 OS=Homo sapiens GN=DDX12P
PE=5 SV=3
Length = 950
Score = 250 bits (638), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 119/285 (41%), Positives = 185/285 (64%), Gaps = 18/285 (6%)
Query: 405 TQEKPKLSGLQSFLKGVQ-ENNPNLSKPSEGGIEEAPSQVQEDQVRNPMLSVVTFLESLV 463
++E+PKL+G Q FL+ +Q L+ P++ SQ Q +P++ + FL +L
Sbjct: 540 SREQPKLAGFQQFLQSLQPRTTEALAAPAD------ESQASVPQPASPLMHIEGFLAALT 593
Query: 464 NKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLF 523
N+DGR+++++ LS+S +K++LLNPA HF +V++ R++++AGGTM+PVS F+ QL
Sbjct: 594 TANQDGRVILSRQGSLSQSTLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSNFRQQLL 653
Query: 524 GSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITN 583
GV R+ FSCGHVIP +NILPL++CSG +N+ + TF+ R + E+ + N
Sbjct: 654 ACAGVEAERVVEFSCGHVIPPDNILPLVICSGVSNQPLEFTFQKRDLPQMMDEVGRILCN 713
Query: 584 LCTIVPKGMVCFFPSYDYEAIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSD 643
LC +V G+VCFFPSY+Y V+ + + R+A +K +F+EPK +V++VL
Sbjct: 714 LCGVVSGGVVCFFPSYEYLRQVHAHWEKGGL---LGRLAARKKIFQEPKSAHQVEQVLLA 770
Query: 644 YGTSV-----EKG---GALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
Y + E+G GAL+LSV+GGK+SEG+NFSD+LGRCVV++
Sbjct: 771 YSRCLQACGQERGPVTGALLLSVVGGKMSEGINFSDNLGRCVVMV 815
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 84/206 (40%), Positives = 132/206 (64%), Gaps = 7/206 (3%)
Query: 195 TQEKPKLSGLQSFLKGVQ-ENNPNLSKPPEGGIEEAPSQVQEDQVRNPMLSVVTFLESLV 253
++E+PKL+G Q FL+ +Q L+ P + SQ Q +P++ + FL +L
Sbjct: 540 SREQPKLAGFQQFLQSLQPRTTEALAAPAD------ESQASVPQPASPLMHIEGFLAALT 593
Query: 254 NKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLF 313
N+DGR+++++ LS+S +K++LLNPA HF +V++ R++++AGGTM+PVS F+ QL
Sbjct: 594 TANQDGRVILSRQGSLSQSTLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSNFRQQLL 653
Query: 314 GSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITN 373
GV R+ FSCGHVIP +NILPL++CSG +N+ + TF+ R + E+ + N
Sbjct: 654 ACAGVEAERVVEFSCGHVIPPDNILPLVICSGVSNQPLEFTFQKRDLPQMMDEVGRILCN 713
Query: 374 LCTIVPKGMVCFFPSYDYEAIVYNYM 399
LC +V G+VCFFPSY+Y V+ +
Sbjct: 714 LCGVVSGGVVCFFPSYEYLRQVHAHW 739
>sp|A8MPP1|D11L8_HUMAN Putative ATP-dependent RNA helicase DDX11-like protein 8 OS=Homo
sapiens GN=DDX11L8 PE=3 SV=1
Length = 907
Score = 239 bits (611), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 115/285 (40%), Positives = 182/285 (63%), Gaps = 19/285 (6%)
Query: 405 TQEKPKLSGLQSFLKGVQ-ENNPNLSKPSEGGIEEAPSQVQEDQVRNPMLSVVTFLESLV 463
++E+PKL+G Q FL+ +Q L+ P++ SQ Q +P++ + FL +L
Sbjct: 523 SREQPKLAGFQQFLQSLQPRTTEALAAPAD------ESQASVPQPASPLMHIEGFLAALT 576
Query: 464 NKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLF 523
N+DGR+++++ LS+S +K++LLNPA HF +V++ R++++AGGTM+PVS+F+ QL
Sbjct: 577 TANQDGRVILSRQGSLSESTLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLL 636
Query: 524 GSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITN 583
GV R+ FSCGHVIP +NI PL++CSG +N+ + TF+ R + E+ + N
Sbjct: 637 ACAGVEAERVVEFSCGHVIPPDNI-PLVICSGISNQPLEFTFQKRDLPQMMDEVGRILCN 695
Query: 584 LCTIVPKGMVCFFPSYDYEAIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSD 643
LC +V G+VCFF SY+Y V+ + + R+A +K +F+EPK +V++VL
Sbjct: 696 LCGVVSGGVVCFFSSYEYLRQVHAHWEKGGL---LGRLAARKKIFQEPKSAHQVEQVLLA 752
Query: 644 YGTSVEKGG--------ALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
Y ++ G AL+LSV+GGK+SEG+NFSD+LGRCVV++
Sbjct: 753 YSRCIQACGQERGQVTEALLLSVVGGKMSEGINFSDNLGRCVVMV 797
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 131/206 (63%), Gaps = 8/206 (3%)
Query: 195 TQEKPKLSGLQSFLKGVQ-ENNPNLSKPPEGGIEEAPSQVQEDQVRNPMLSVVTFLESLV 253
++E+PKL+G Q FL+ +Q L+ P + SQ Q +P++ + FL +L
Sbjct: 523 SREQPKLAGFQQFLQSLQPRTTEALAAPAD------ESQASVPQPASPLMHIEGFLAALT 576
Query: 254 NKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLF 313
N+DGR+++++ LS+S +K++LLNPA HF +V++ R++++AGGTM+PVS+F+ QL
Sbjct: 577 TANQDGRVILSRQGSLSESTLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLL 636
Query: 314 GSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITN 373
GV R+ FSCGHVIP +NI PL++CSG +N+ + TF+ R + E+ + N
Sbjct: 637 ACAGVEAERVVEFSCGHVIPPDNI-PLVICSGISNQPLEFTFQKRDLPQMMDEVGRILCN 695
Query: 374 LCTIVPKGMVCFFPSYDYEAIVYNYM 399
LC +V G+VCFF SY+Y V+ +
Sbjct: 696 LCGVVSGGVVCFFSSYEYLRQVHAHW 721
>sp|Q5R4R2|SYHC_PONAB Histidine--tRNA ligase, cytoplasmic OS=Pongo abelii GN=HARS PE=2
SV=1
Length = 509
Score = 206 bits (525), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 114/199 (57%), Positives = 131/199 (65%), Gaps = 28/199 (14%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MVGEK L+PEVAD+IG+YV +HG V LVE LL D L++SKQA EGL +KLLF Y ++
Sbjct: 253 MVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKLSQSKQALEGLGDLKLLFEYLTLF 312
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVLKDQ---------AVGSVAGGGRYDNLVGMFDP 111
G+ D I FDLSLARGLDYYTGVIYEAVL VGSVA GGRYD LVGMFDP
Sbjct: 313 GIDDKISFDLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAGGRYDGLVGMFDP 372
Query: 112 KNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYV 171
K + PCV GL IGVER+FSI+E R KV+TT TQV V
Sbjct: 373 KGRKVPCV---------GL----------SIGVERIFSIVEQRLEALEEKVRTTETQVLV 413
Query: 172 ASAQKNLVEPRMQLCHELW 190
ASAQK L+E R++L ELW
Sbjct: 414 ASAQKKLLEERLKLVSELW 432
>sp|Q61035|SYHC_MOUSE Histidine--tRNA ligase, cytoplasmic OS=Mus musculus GN=Hars PE=2
SV=2
Length = 509
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 112/199 (56%), Positives = 131/199 (65%), Gaps = 28/199 (14%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MVGEK L+PEVAD+IG+YV +HG V LVE LL D L+++KQA EGL +KLLF Y ++
Sbjct: 253 MVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKLSQNKQAVEGLGDLKLLFEYLILF 312
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVLKDQ---------AVGSVAGGGRYDNLVGMFDP 111
G+ D I FDLSLARGLDYYTGVIYEAVL VGS+A GGRYD LVGMFDP
Sbjct: 313 GIDDKISFDLSLARGLDYYTGVIYEAVLLQMPTQAGEEPLGVGSIAAGGRYDGLVGMFDP 372
Query: 112 KNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYV 171
K + PCV GL IGVER+FSI+E R KV+TT TQV V
Sbjct: 373 KGRKVPCV---------GL----------SIGVERIFSIVEQRLEASEEKVRTTETQVLV 413
Query: 172 ASAQKNLVEPRMQLCHELW 190
ASAQK L+E R++L ELW
Sbjct: 414 ASAQKKLLEERLKLVSELW 432
>sp|P12081|SYHC_HUMAN Histidine--tRNA ligase, cytoplasmic OS=Homo sapiens GN=HARS PE=1
SV=2
Length = 509
Score = 204 bits (520), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 112/199 (56%), Positives = 131/199 (65%), Gaps = 28/199 (14%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MVGEK L+PEVAD+IG+YV +HG V LVE LL D L+++KQA EGL +KLLF Y ++
Sbjct: 253 MVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKLSQNKQALEGLGDLKLLFEYLTLF 312
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVLKDQ---------AVGSVAGGGRYDNLVGMFDP 111
G+ D I FDLSLARGLDYYTGVIYEAVL VGSVA GGRYD LVGMFDP
Sbjct: 313 GIDDKISFDLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAGGRYDGLVGMFDP 372
Query: 112 KNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYV 171
K + PCV GL IGVER+FSI+E R K++TT TQV V
Sbjct: 373 KGRKVPCV---------GL----------SIGVERIFSIVEQRLEALEEKIRTTETQVLV 413
Query: 172 ASAQKNLVEPRMQLCHELW 190
ASAQK L+E R++L ELW
Sbjct: 414 ASAQKKLLEERLKLVSELW 432
>sp|Q2KI84|SYHC_BOVIN Histidine--tRNA ligase, cytoplasmic OS=Bos taurus GN=HARS PE=2 SV=1
Length = 509
Score = 204 bits (520), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/199 (56%), Positives = 132/199 (66%), Gaps = 28/199 (14%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MVGEK L+PEVAD+IG+YV +HG V LVE LL D L+++KQA EGL +KLLF Y ++
Sbjct: 253 MVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKLSQNKQALEGLGDLKLLFEYLTLF 312
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVL---------KDQAVGSVAGGGRYDNLVGMFDP 111
G+ D I FDLSLARGLDYYTGVIYEAVL + VGSVA GGRYD LVGMFDP
Sbjct: 313 GIADKISFDLSLARGLDYYTGVIYEAVLLQPPARAGEEPLGVGSVAAGGRYDGLVGMFDP 372
Query: 112 KNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYV 171
K + PCV GL IGVER+FSI+E R KV+TT TQV V
Sbjct: 373 KGRKVPCV---------GL----------SIGVERIFSIVEQRLEALEEKVRTTETQVLV 413
Query: 172 ASAQKNLVEPRMQLCHELW 190
ASAQK L+E R++L ELW
Sbjct: 414 ASAQKKLLEERLKLISELW 432
>sp|Q5R5E5|SYHM_PONAB Probable histidine--tRNA ligase, mitochondrial OS=Pongo abelii
GN=HARS2 PE=2 SV=1
Length = 506
Score = 196 bits (497), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 114/227 (50%), Positives = 142/227 (62%), Gaps = 40/227 (17%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MV +K L+PEVAD+IG+YV HG V LVE + D L+++KQA EGL +KLLF Y ++
Sbjct: 254 MVVKKGLAPEVADRIGDYVQCHGGVSLVEQMFQDPRLSQNKQALEGLGDLKLLFEYLTLF 313
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVL---KDQA------VGSVAGGGRYDNLVGMFDP 111
G+ D I FDLSLARGLDYYTGVIYEAVL QA VGSVA GGRYD LVGMFDP
Sbjct: 314 GIADKISFDLSLARGLDYYTGVIYEAVLLQTPTQAGEEPLNVGSVAAGGRYDGLVGMFDP 373
Query: 112 KNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYV 171
K PCV GL IGVER+F I+E R +G KV+TT TQV+V
Sbjct: 374 KGHKVPCV---------GL----------SIGVERIFYIVEQRMKTKGEKVRTTETQVFV 414
Query: 172 ASAQKNLVEPRMQLCHELWGGEKTQEKPKLSGLQSFLKGVQENNPNL 218
A+ QKN ++ R++L ELW SG+++ + + +NNP L
Sbjct: 415 ATPQKNFLQERLKLIAELWN----------SGIKAEM--LYKNNPKL 449
>sp|P49590|SYHM_HUMAN Probable histidine--tRNA ligase, mitochondrial OS=Homo sapiens
GN=HARS2 PE=1 SV=1
Length = 506
Score = 195 bits (496), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 114/227 (50%), Positives = 142/227 (62%), Gaps = 40/227 (17%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MV +K L+PEVAD+IG+YV HG V LVE + D L+++KQA EGL +KLLF Y ++
Sbjct: 254 MVVKKGLAPEVADRIGDYVQCHGGVSLVEQMFQDPRLSQNKQALEGLGDLKLLFEYLTLF 313
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVL---KDQA------VGSVAGGGRYDNLVGMFDP 111
G+ D I FDLSLARGLDYYTGVIYEAVL QA VGSVA GGRYD LVGMFDP
Sbjct: 314 GIADKISFDLSLARGLDYYTGVIYEAVLLQTPTQAGEEPLNVGSVAAGGRYDGLVGMFDP 373
Query: 112 KNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYV 171
K PCV GL IGVER+F I+E R +G KV+TT TQV+V
Sbjct: 374 KGHKVPCV---------GL----------SIGVERIFYIVEQRMKTKGEKVRTTETQVFV 414
Query: 172 ASAQKNLVEPRMQLCHELWGGEKTQEKPKLSGLQSFLKGVQENNPNL 218
A+ QKN ++ R++L ELW SG+++ + + +NNP L
Sbjct: 415 ATPQKNFLQERLKLIAELWD----------SGIKAEM--LYKNNPKL 449
>sp|A5D7V9|SYHM_BOVIN Probable histidine--tRNA ligase, mitochondrial OS=Bos taurus
GN=HARS2 PE=2 SV=1
Length = 506
Score = 190 bits (482), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 106/227 (46%), Positives = 138/227 (60%), Gaps = 40/227 (17%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MV +K L+PEVAD+IG+YV HG + LVE + D L+++KQA EGL +KLLF Y ++
Sbjct: 254 MVVKKGLAPEVADRIGDYVQCHGGISLVEQMFQDPRLSQNKQALEGLGDLKLLFEYLTLF 313
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVLKDQAV---------GSVAGGGRYDNLVGMFDP 111
G+ + + FDLSLARGLDYYTGVIYEAVL V GSVA GGRYD LVGMFDP
Sbjct: 314 GVAEKVSFDLSLARGLDYYTGVIYEAVLLQTPVHAEEEPLNMGSVAAGGRYDGLVGMFDP 373
Query: 112 KNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYV 171
+ PCV IGVER+FSI+E R G K++TT TQV+V
Sbjct: 374 RGHKVPCVGL-------------------SIGVERIFSIVEQRIKTFGEKIRTTETQVFV 414
Query: 172 ASAQKNLVEPRMQLCHELWGGEKTQEKPKLSGLQSFLKGVQENNPNL 218
A+ QKN ++ R++L ELW +G+++ L + +NNP L
Sbjct: 415 ATPQKNFLQERLKLIAELWD----------AGIKAEL--MYKNNPKL 449
>sp|P70076|SYHC_TAKRU Histidine--tRNA ligase, cytoplasmic OS=Takifugu rubripes GN=hars
PE=3 SV=1
Length = 519
Score = 187 bits (475), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 123/209 (58%), Gaps = 38/209 (18%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MV EK LS E AD+IG YV G +DL E LL D+ + +S QA GL IKLLF Y Q++
Sbjct: 258 MVNEKGLSEEAADQIGVYVGMQGGMDLAERLLQDQKMCQSTQACAGLTDIKLLFSYLQLF 317
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVLKDQA-------------------VGSVAGGGR 101
+ D +VFDLSLARGLDYYTG+IYEA+L VGSVAGGGR
Sbjct: 318 QVTDKVVFDLSLARGLDYYTGIIYEAILTQAGVAPVAPETSNEAPTEECVTVGSVAGGGR 377
Query: 102 YDNLVGMFDPKNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVK 161
YD LVGMFDPK + PCV IG+ER+FSI+E + K
Sbjct: 378 YDGLVGMFDPKGRKVPCVGVS-------------------IGIERIFSIMEQKAEASTEK 418
Query: 162 VKTTSTQVYVASAQKNLVEPRMQLCHELW 190
++TT QV VA+AQKNL+E R++L ELW
Sbjct: 419 IRTTEVQVMVAAAQKNLLEERLRLITELW 447
>sp|Q99KK9|SYHM_MOUSE Probable histidine--tRNA ligase, mitochondrial OS=Mus musculus
GN=Hars2 PE=2 SV=1
Length = 505
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/199 (49%), Positives = 128/199 (64%), Gaps = 28/199 (14%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MV +K L+PEVAD+IG++V HG + LVE+L D L++S+ A +GL +KLLF Y +++
Sbjct: 253 MVAKKGLAPEVADRIGDFVQYHGGISLVEDLFKDPRLSQSQLALQGLGDLKLLFEYLRLF 312
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVLKDQ---------AVGSVAGGGRYDNLVGMFDP 111
G+ D I DLSLARGLDYYTGVIYEAVL + +VGSVA GGRYDNLV FDP
Sbjct: 313 GIADKISLDLSLARGLDYYTGVIYEAVLLESPAQAGKETLSVGSVAAGGRYDNLVAQFDP 372
Query: 112 KNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYV 171
K PCV GL IGVER+F ++E + G KV+TT TQV+V
Sbjct: 373 KGHHVPCV---------GL----------SIGVERIFYLVEQKMKMSGEKVRTTETQVFV 413
Query: 172 ASAQKNLVEPRMQLCHELW 190
A+ QKN ++ R+++ ELW
Sbjct: 414 ATPQKNFLQERLKIIAELW 432
>sp|A5DNW6|CHL1_PICGU ATP-dependent RNA helicase CHL1 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=CHL1 PE=3 SV=2
Length = 825
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/247 (38%), Positives = 155/247 (62%), Gaps = 11/247 (4%)
Query: 436 IEEAPSQVQEDQVRNPMLSVVT-FLESLVNKNEDGRILVTKNPELSKSHIKYILLNPANH 494
IE++ + E Q +P+L VT FL+SLVN +++GR K + + IKY+LL+P+
Sbjct: 472 IEQSREESDEKQASSPLLFKVTAFLKSLVNPSKEGRFFWDKIND--DTEIKYLLLDPSEM 529
Query: 495 FTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCS 554
F D+V+ AR +++ GGTMEPV ++ LF VP +I F+CGH++P+ENI L + S
Sbjct: 530 FRDVVESARCVLLCGGTMEPVEDYYRYLFPY--VPGEKIKKFTCGHIVPQENIEVLTVSS 587
Query: 555 GPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDY-EAIVYNYMRDNH 613
T FD ++ R L+E+A+++ ++C VP G++ F PSY Y ++ + +D +
Sbjct: 588 RKTT-VFDFSYHKRNDPSMLRELALSLQDICERVPNGIIVFAPSYKYLNQLISTWRKDGN 646
Query: 614 FIERIARIAKKKVVFREPKKTSEVDKVLSDYGTSVEKGGALMLSVIGGKLSEGLNFSDDL 673
+A+I+ K VF E ++ ++ +L DYG + GA++ SV+GGK+SEG+NFSD+L
Sbjct: 647 ----LAKISTLKQVFLESSDSTSIESILRDYGAAARGSGAILFSVVGGKMSEGVNFSDEL 702
Query: 674 GRCVVVM 680
R V+++
Sbjct: 703 ARAVIML 709
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 104/167 (62%), Gaps = 6/167 (3%)
Query: 226 IEEAPSQVQEDQVRNPMLSVVT-FLESLVNKNEDGRILVTKNPELSKSHIKYILLNPANH 284
IE++ + E Q +P+L VT FL+SLVN +++GR K + + IKY+LL+P+
Sbjct: 472 IEQSREESDEKQASSPLLFKVTAFLKSLVNPSKEGRFFWDKIND--DTEIKYLLLDPSEM 529
Query: 285 FTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCS 344
F D+V+ AR +++ GGTMEPV ++ LF VP +I F+CGH++P+ENI L + S
Sbjct: 530 FRDVVESARCVLLCGGTMEPVEDYYRYLFPY--VPGEKIKKFTCGHIVPQENIEVLTVSS 587
Query: 345 GPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDY 391
T FD ++ R L+E+A+++ ++C VP G++ F PSY Y
Sbjct: 588 RKTT-VFDFSYHKRNDPSMLRELALSLQDICERVPNGIIVFAPSYKY 633
>sp|A2QY22|CHL1_ASPNC ATP-dependent RNA helicase chl1 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=chl1 PE=3 SV=1
Length = 874
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 107/282 (37%), Positives = 162/282 (57%), Gaps = 24/282 (8%)
Query: 419 KGVQENNP----------NLSKPSEGGIEEAPSQVQEDQVRNPMLSVV----TFLESLVN 464
KGV + NP L++ +G +E + R+P + V+ FL SL+N
Sbjct: 477 KGVDQINPYKLSRYLQESKLARKVDGYVEFTRDPSDKQASRSPTVPVLFHIQGFLLSLMN 536
Query: 465 KNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFG 524
+ +GR+ +K E +KY+LL+P N F ++V+DAR+II+AGGTM P++++ + LF
Sbjct: 537 PSAEGRLFYSK--EQGDIQLKYMLLDPTNQFRELVEDARAIILAGGTMSPMTDYMNHLFS 594
Query: 525 SLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNL 584
VP SR+ FS GHVIP EN++ L G +FD T++ R + ++ TI L
Sbjct: 595 Y--VPASRLDTFSYGHVIPPENLIAHTLVRGVQGSEFDFTYDARDSEKMIMDLGRTIATL 652
Query: 585 CTIVPKGMVCFFPSYDYEAIVYNYMRDNHFIER----IARIAKKKVVFREPKK-TSEVDK 639
C ++P G+V FFPSYDY V N + E+ I +KK + E + T ++
Sbjct: 653 CHVIPDGVVAFFPSYDYLGRVLNIWKKPMLGEQGQTVYNLIGQKKPILSESRDMTVTTEE 712
Query: 640 VLSDYGTSVEKG-GALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
+L Y +V+ G GAL+LSV+GGKLSEG+NFSD LGR V+++
Sbjct: 713 LLHTYANTVDSGRGALLLSVVGGKLSEGINFSDKLGRGVLIV 754
Score = 139 bits (349), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 115/203 (56%), Gaps = 18/203 (8%)
Query: 209 KGVQENNP----------NLSKPPEGGIEEAPSQVQEDQVRNPMLSVV----TFLESLVN 254
KGV + NP L++ +G +E + R+P + V+ FL SL+N
Sbjct: 477 KGVDQINPYKLSRYLQESKLARKVDGYVEFTRDPSDKQASRSPTVPVLFHIQGFLLSLMN 536
Query: 255 KNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFG 314
+ +GR+ +K E +KY+LL+P N F ++V+DAR+II+AGGTM P++++ + LF
Sbjct: 537 PSAEGRLFYSK--EQGDIQLKYMLLDPTNQFRELVEDARAIILAGGTMSPMTDYMNHLFS 594
Query: 315 SLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNL 374
VP SR+ FS GHVIP EN++ L G +FD T++ R + ++ TI L
Sbjct: 595 Y--VPASRLDTFSYGHVIPPENLIAHTLVRGVQGSEFDFTYDARDSEKMIMDLGRTIATL 652
Query: 375 CTIVPKGMVCFFPSYDYEAIVYN 397
C ++P G+V FFPSYDY V N
Sbjct: 653 CHVIPDGVVAFFPSYDYLGRVLN 675
>sp|A1CJ34|CHL1_ASPCL ATP-dependent RNA helicase chl1 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=chl1 PE=3 SV=1
Length = 731
Score = 182 bits (463), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 106/284 (37%), Positives = 163/284 (57%), Gaps = 28/284 (9%)
Query: 419 KGVQENNP----------NLSKPSEGGIEEAPSQVQEDQVRNP----MLSVVTFLESLVN 464
KGV + NP L++ +G +E + P + V +FL L+N
Sbjct: 332 KGVDQINPYKLSHYLQESKLARKVDGYVEYSKDTANRQSHGKPSTPVLFHVQSFLLPLMN 391
Query: 465 KNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFG 524
+ +GR+ K+ + +KY+LL+P NHF +IV+DAR++I+AGGTM P+S++ + LF
Sbjct: 392 PSAEGRLFYMKDQ--NDIQLKYLLLDPTNHFREIVEDARAVILAGGTMSPMSDYMNHLFP 449
Query: 525 SLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNL 584
VP SR+ FS GHVIP EN++ L G FD T+E+R + ++ T+ L
Sbjct: 450 Y--VPASRLDTFSYGHVIPPENLVAHTLAQGVMGCAFDFTYESRDSEKMIIDLGRTVATL 507
Query: 585 CTIVPKGMVCFFPSYDYEAIVYNYMR------DNHFIERIARIAKKKVVFREPKK-TSEV 637
C +P G+V FFPSYDY + + + + N I + I +KK + E + T++
Sbjct: 508 CQAIPDGVVAFFPSYDYLSRILHIWKKPLGADKNQTI--LGLIERKKPILYESRDMTTKS 565
Query: 638 DKVLSDYGTSVEKG-GALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
D +L +Y +++ G GAL+LSVIGGKLSEG+NFSD LGR V+++
Sbjct: 566 DDILQEYTRTIDSGSGALLLSVIGGKLSEGINFSDRLGRGVLII 609
Score = 135 bits (341), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 110/197 (55%), Gaps = 18/197 (9%)
Query: 209 KGVQENNP----------NLSKPPEGGIEEAPSQVQEDQVRNP----MLSVVTFLESLVN 254
KGV + NP L++ +G +E + P + V +FL L+N
Sbjct: 332 KGVDQINPYKLSHYLQESKLARKVDGYVEYSKDTANRQSHGKPSTPVLFHVQSFLLPLMN 391
Query: 255 KNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFG 314
+ +GR+ K+ + +KY+LL+P NHF +IV+DAR++I+AGGTM P+S++ + LF
Sbjct: 392 PSAEGRLFYMKDQ--NDIQLKYLLLDPTNHFREIVEDARAVILAGGTMSPMSDYMNHLFP 449
Query: 315 SLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNL 374
VP SR+ FS GHVIP EN++ L G FD T+E+R + ++ T+ L
Sbjct: 450 Y--VPASRLDTFSYGHVIPPENLVAHTLAQGVMGCAFDFTYESRDSEKMIIDLGRTVATL 507
Query: 375 CTIVPKGMVCFFPSYDY 391
C +P G+V FFPSYDY
Sbjct: 508 CQAIPDGVVAFFPSYDY 524
>sp|P07178|SYHC_MESAU Histidine--tRNA ligase, cytoplasmic OS=Mesocricetus auratus GN=HARS
PE=2 SV=1
Length = 508
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/198 (52%), Positives = 122/198 (61%), Gaps = 27/198 (13%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MVGEK L+PEVAD+IG+YV +HG V LVE LL D L+++KQA EGL +KLLF Y ++
Sbjct: 253 MVGEKGLAPEVADRIGDYVQQHGEVCLVEQLLQDPKLSQNKQAVEGLGDLKLLFEYLTLF 312
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVL--------KDQAVGSVAGGGRYDNLVGMFDPK 112
G+ D I FDLSLARGLDYYTGVIY AVL ++ G RYD LVGMFDPK
Sbjct: 313 GIDDKISFDLSLARGLDYYTGVIYVAVLLQMPTGAGEEPWCGQCGCWRRYDGLVGMFDPK 372
Query: 113 NKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYVA 172
+ PCV GL IGVER+FSI+E R KV+TT TQV VA
Sbjct: 373 GRKVPCV---------GL----------SIGVERIFSIVEQRLEALEEKVRTTETQVLVA 413
Query: 173 SAQKNLVEPRMQLCHELW 190
SAQK L + C +LW
Sbjct: 414 SAQKKLAGGETKACLQLW 431
>sp|A1D8E4|CHL1_NEOFI ATP-dependent RNA helicase chl1 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=chl1
PE=3 SV=1
Length = 861
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 103/281 (36%), Positives = 170/281 (60%), Gaps = 23/281 (8%)
Query: 419 KGVQENNP----------NLSKPSEGGIE--EAPSQVQEDQVRNPMLSVV-TFLESLVNK 465
KGV + NP L++ +G +E + +Q +D+ +P+L +V +FL L+N
Sbjct: 464 KGVDQINPYKLSRYLQESKLARKVDGYVEFSKDKNQQSDDKPSSPVLFLVQSFLLPLMNP 523
Query: 466 NEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGS 525
+ +GR K + +KY+LL+P NHF +IV+DAR++I+AGGTM P+S++++ LF
Sbjct: 524 SAEGRFFYLKFHD--DIQLKYMLLDPTNHFREIVEDARAVILAGGTMSPMSDYRNHLFSY 581
Query: 526 LGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLC 585
+ SR+ FS GHVIP EN++ L +G +FD T+++R + ++ T+ LC
Sbjct: 582 --IAPSRLDTFSYGHVIPPENLIAHTLVNGVLGSEFDFTYDSRDSEKMILDLGRTVAMLC 639
Query: 586 TIVPKGMVCFFPSYDYEAIVYNYMRDNHFIER----IARIAKKKVVFREPKKT-SEVDKV 640
+P G+V FFPSYDY + + R E+ ++ I +KK + E + ++ + +
Sbjct: 640 QAIPDGVVAFFPSYDYLSRILAIWRKPLVGEKGQTILSLIERKKSILYEGRDMGAKTEDL 699
Query: 641 LSDYGTSVEKG-GALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
L +Y +++ G GAL+LSV+GGKLSEG+NFSD LGR V+++
Sbjct: 700 LQEYTRTIDSGQGALLLSVVGGKLSEGINFSDKLGRGVLII 740
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 118/196 (60%), Gaps = 17/196 (8%)
Query: 209 KGVQENNP----------NLSKPPEGGIE--EAPSQVQEDQVRNPMLSVV-TFLESLVNK 255
KGV + NP L++ +G +E + +Q +D+ +P+L +V +FL L+N
Sbjct: 464 KGVDQINPYKLSRYLQESKLARKVDGYVEFSKDKNQQSDDKPSSPVLFLVQSFLLPLMNP 523
Query: 256 NEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGS 315
+ +GR K + +KY+LL+P NHF +IV+DAR++I+AGGTM P+S++++ LF
Sbjct: 524 SAEGRFFYLKFHD--DIQLKYMLLDPTNHFREIVEDARAVILAGGTMSPMSDYRNHLFSY 581
Query: 316 LGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLC 375
+ SR+ FS GHVIP EN++ L +G +FD T+++R + ++ T+ LC
Sbjct: 582 --IAPSRLDTFSYGHVIPPENLIAHTLVNGVLGSEFDFTYDSRDSEKMILDLGRTVAMLC 639
Query: 376 TIVPKGMVCFFPSYDY 391
+P G+V FFPSYDY
Sbjct: 640 QAIPDGVVAFFPSYDY 655
>sp|Q4WWE9|CHL1_ASPFU ATP-dependent RNA helicase chl1 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=chl1
PE=3 SV=1
Length = 782
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/281 (36%), Positives = 169/281 (60%), Gaps = 23/281 (8%)
Query: 419 KGVQENNP----------NLSKPSEGGIE--EAPSQVQEDQVRNPMLSVV-TFLESLVNK 465
KGV + NP L++ +G +E + +Q +D+ +P+L +V +FL SL+N
Sbjct: 385 KGVDQINPYKLSRYLQESKLARKVDGYVEFLKNKNQQSDDKPSSPVLFLVQSFLLSLMNP 444
Query: 466 NEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGS 525
+ +GR K + ++Y+LL+P N F +IV+DAR++I+AGGTM P+S++++ LF
Sbjct: 445 SAEGRFFYLKCHD--DIQLRYMLLDPTNQFREIVEDARAVILAGGTMSPMSDYRNHLFSY 502
Query: 526 LGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLC 585
+ SR+ FS GHVIP EN++ L +G +FD T+++R + ++ T+ LC
Sbjct: 503 IA--PSRLDTFSYGHVIPPENLIAHTLVNGVLGSEFDFTYDSRDSEKMILDLGRTVATLC 560
Query: 586 TIVPKGMVCFFPSYDYEAIVYNYMRDNHFIER----IARIAKKKVVFREPKKTS-EVDKV 640
+P G+V FFPSYDY + + R E+ ++ I ++K + E + + D +
Sbjct: 561 QAIPDGVVAFFPSYDYLSRIVAIWRKPLEGEKGETILSLIEREKSILYEGRDMGPKTDDL 620
Query: 641 LSDYGTSVEKG-GALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
L +Y +++ G GAL+LSV+GGKLSEG+NFSD LGR V+++
Sbjct: 621 LQEYTRTIDSGQGALLLSVVGGKLSEGINFSDKLGRGVLII 661
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 118/196 (60%), Gaps = 17/196 (8%)
Query: 209 KGVQENNP----------NLSKPPEGGIE--EAPSQVQEDQVRNPMLSVV-TFLESLVNK 255
KGV + NP L++ +G +E + +Q +D+ +P+L +V +FL SL+N
Sbjct: 385 KGVDQINPYKLSRYLQESKLARKVDGYVEFLKNKNQQSDDKPSSPVLFLVQSFLLSLMNP 444
Query: 256 NEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGS 315
+ +GR K + ++Y+LL+P N F +IV+DAR++I+AGGTM P+S++++ LF
Sbjct: 445 SAEGRFFYLKCHD--DIQLRYMLLDPTNQFREIVEDARAVILAGGTMSPMSDYRNHLFSY 502
Query: 316 LGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLC 375
+ SR+ FS GHVIP EN++ L +G +FD T+++R + ++ T+ LC
Sbjct: 503 IA--PSRLDTFSYGHVIPPENLIAHTLVNGVLGSEFDFTYDSRDSEKMILDLGRTVATLC 560
Query: 376 TIVPKGMVCFFPSYDY 391
+P G+V FFPSYDY
Sbjct: 561 QAIPDGVVAFFPSYDY 576
>sp|Q6BZD9|CHL1_DEBHA ATP-dependent RNA helicase CHL1 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=CHL1 PE=3 SV=2
Length = 820
Score = 176 bits (445), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 95/235 (40%), Positives = 149/235 (63%), Gaps = 13/235 (5%)
Query: 450 NPMLSVVT-FLESLVNKNEDGRILVTK-NPELSKSHIKYILLNPANHFTDIVQDARSIIV 507
NP+L +T FL+ L N +++G+ K N +S I Y+LL+P+ F DIV+ AR +++
Sbjct: 479 NPLLFKITKFLKCLTNPSKEGKFFWDKTNDSVS---INYMLLDPSEIFRDIVKRARCVLL 535
Query: 508 AGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFEN 567
GGTMEP++++ + LF +P +I FSCGH+IP+EN L + + F+ +F+
Sbjct: 536 CGGTMEPMNDYTNYLFPY--IPPEQIKKFSCGHIIPQEN-LEVFPIGNYNDISFEFSFDK 592
Query: 568 RTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYEAIVYNYMRDNHFIERIARIAKKKVV 627
R + E+ I N+ P G+V FFPSY Y +V N R N IE + ++ K +
Sbjct: 593 RNNSKMIIELGHAILNIIESTPDGIVIFFPSYKYLNVVMNVWRQNKIIESLTKV---KAI 649
Query: 628 FREPKKTSEVDKVLSDYGTS--VEKGGALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
F+EP+ +S+V+KVL+DY ++ EK AL+LSV+GGK+SEG+NFSD+L R V+++
Sbjct: 650 FQEPEDSSKVEKVLNDYSSTNKSEKHSALLLSVVGGKMSEGINFSDELARGVIMI 704
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 94/160 (58%), Gaps = 8/160 (5%)
Query: 240 NPMLSVVT-FLESLVNKNEDGRILVTK-NPELSKSHIKYILLNPANHFTDIVQDARSIIV 297
NP+L +T FL+ L N +++G+ K N +S I Y+LL+P+ F DIV+ AR +++
Sbjct: 479 NPLLFKITKFLKCLTNPSKEGKFFWDKTNDSVS---INYMLLDPSEIFRDIVKRARCVLL 535
Query: 298 AGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFEN 357
GGTMEP++++ + LF +P +I FSCGH+IP+EN L + + F+ +F+
Sbjct: 536 CGGTMEPMNDYTNYLFPY--IPPEQIKKFSCGHIIPQEN-LEVFPIGNYNDISFEFSFDK 592
Query: 358 RTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYEAIVYN 397
R + E+ I N+ P G+V FFPSY Y +V N
Sbjct: 593 RNNSKMIIELGHAILNIIESTPDGIVIFFPSYKYLNVVMN 632
>sp|Q5AD67|CHL1_CANAL ATP-dependent RNA helicase CHL1 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=CHL1 PE=3 SV=1
Length = 842
Score = 173 bits (438), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 92/234 (39%), Positives = 144/234 (61%), Gaps = 11/234 (4%)
Query: 450 NPML-SVVTFLESLVNKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVA 508
NP+L +++ FL +L N +++G+ + E + Y+LL+P+ F +IV A+ +++
Sbjct: 500 NPLLFTIIKFLRTLTNLSKEGKFFW--DNENGTISLNYMLLDPSAVFKEIVDQAKCVLLC 557
Query: 509 GGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENR 568
GGTMEP+S++ D LF S VP ++I+ F+CGHVIPKEN L + S + F+ +++ R
Sbjct: 558 GGTMEPMSDYMDYLFPS--VPTNKINTFACGHVIPKEN-LQVFPISQWNDTNFEFSYQKR 614
Query: 569 TKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYEAIVYNYMRDNHFIERIARIAKKKVVF 628
L + + + VP G+V FFPSY Y V + RD + I +K +F
Sbjct: 615 NDSKQLMALGEFLIEITKRVPYGVVIFFPSYKYLDQVLQFWRDTKIL---TSIESEKTIF 671
Query: 629 REPKKTSEVDKVLSDYG--TSVEKGGALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
REPK S V+KVL++YG E+ GA++ SV+GGK+SEG+NFSDDL R V+++
Sbjct: 672 REPKDPSNVEKVLNEYGYLIQTERKGAILFSVVGGKMSEGINFSDDLARAVIMV 725
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 95/163 (58%), Gaps = 6/163 (3%)
Query: 240 NPML-SVVTFLESLVNKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVA 298
NP+L +++ FL +L N +++G+ + E + Y+LL+P+ F +IV A+ +++
Sbjct: 500 NPLLFTIIKFLRTLTNLSKEGKFFW--DNENGTISLNYMLLDPSAVFKEIVDQAKCVLLC 557
Query: 299 GGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENR 358
GGTMEP+S++ D LF S VP ++I+ F+CGHVIPKEN L + S + F+ +++ R
Sbjct: 558 GGTMEPMSDYMDYLFPS--VPTNKINTFACGHVIPKEN-LQVFPISQWNDTNFEFSYQKR 614
Query: 359 TKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYEAIVYNYMPD 401
L + + + VP G+V FFPSY Y V + D
Sbjct: 615 NDSKQLMALGEFLIEITKRVPYGVVIFFPSYKYLDQVLQFWRD 657
>sp|A3LN13|CHL1_PICST ATP-dependent RNA helicase CHL1 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=CHL1 PE=3 SV=2
Length = 835
Score = 173 bits (438), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 98/270 (36%), Positives = 157/270 (58%), Gaps = 26/270 (9%)
Query: 414 LQSFLKGVQENNPNLSKPSEGGIEEAPSQVQEDQVRNPML-SVVTFLESLVNKNEDGRIL 472
++S+++ V EN +K S NP+L +V FL+ LVN +++G+
Sbjct: 472 IESYMEKVAENENEQAKTSSS---------------NPLLYKIVQFLKCLVNPSKEGKFF 516
Query: 473 VTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESR 532
++ IKY+LL+P++ F DIV AR +I+ GGTMEP+SEFK+ LF V + +
Sbjct: 517 WDSTNGITS--IKYMLLDPSSVFKDIVSKARCVILCGGTMEPMSEFKNFLFPY--VEDKK 572
Query: 533 IHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGM 592
I FSC H+IP +N L + S N + +F+NR ++ + +I +C VP G+
Sbjct: 573 IKSFSCNHIIPPDN-LKVYPVSSQNNVTLEFSFDNRNNPLMIEALGASIVRICQSVPDGV 631
Query: 593 VCFFPSYDYEAIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDYGTSV--EK 650
V FFPSY Y + + + + + +I +K +F EP S+V +L+DY ++ EK
Sbjct: 632 VVFFPSYKYMNHILSIWKST---DVLTQIESQKKLFEEPTSASQVQTILADYANTIKEEK 688
Query: 651 GGALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
GA++ SV+GGK+SEG+NF+D+LGR VV++
Sbjct: 689 KGAILFSVVGGKMSEGINFADELGRAVVMV 718
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 93/153 (60%), Gaps = 6/153 (3%)
Query: 240 NPML-SVVTFLESLVNKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVA 298
NP+L +V FL+ LVN +++G+ ++ IKY+LL+P++ F DIV AR +I+
Sbjct: 493 NPLLYKIVQFLKCLVNPSKEGKFFWDSTNGITS--IKYMLLDPSSVFKDIVSKARCVILC 550
Query: 299 GGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENR 358
GGTMEP+SEFK+ LF V + +I FSC H+IP +N L + S N + +F+NR
Sbjct: 551 GGTMEPMSEFKNFLFPY--VEDKKIKSFSCNHIIPPDN-LKVYPVSSQNNVTLEFSFDNR 607
Query: 359 TKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDY 391
++ + +I +C VP G+V FFPSY Y
Sbjct: 608 NNPLMIEALGASIVRICQSVPDGVVVFFPSYKY 640
>sp|A7ERG1|CHL1_SCLS1 ATP-dependent RNA helicase CHL1 OS=Sclerotinia sclerotiorum (strain
ATCC 18683 / 1980 / Ss-1) GN=CHL1 PE=3 SV=1
Length = 902
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/215 (42%), Positives = 130/215 (60%), Gaps = 21/215 (9%)
Query: 484 IKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIP 543
+K+ LLNPA HF IV AR+II+AGGTM P S++ LF S +P +I SCGHVIP
Sbjct: 534 LKFQLLNPAPHFESIVSSARAIILAGGTMSPFSDYTSILFPS--IPSHKITTLSCGHVIP 591
Query: 544 KENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDY-E 602
K ++ + GPT F TF NR D + E+ + N+CTIVP G+V FFPSY++
Sbjct: 592 KTHLFASTVSRGPTGIPFKWTFANRGNTDMMDELGRVLLNVCTIVPDGVVVFFPSYNFLS 651
Query: 603 AIVYNY----------------MRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDYGT 646
I+Y + + R+++KK +F+E K+ S V+ +L+ Y
Sbjct: 652 TILYRFSIPSSGTGSATATATGTEKGKGKTILERLSEKKPIFQESKEES-VETILAAYAK 710
Query: 647 SVEKG-GALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
S+ +G GAL+ SV+GGKLSEG+NFSD LGRCV+++
Sbjct: 711 SIAEGKGALLFSVVGGKLSEGINFSDALGRCVMIV 745
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 79/126 (62%), Gaps = 3/126 (2%)
Query: 274 IKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIP 333
+K+ LLNPA HF IV AR+II+AGGTM P S++ LF S +P +I SCGHVIP
Sbjct: 534 LKFQLLNPAPHFESIVSSARAIILAGGTMSPFSDYTSILFPS--IPSHKITTLSCGHVIP 591
Query: 334 KENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDY-E 392
K ++ + GPT F TF NR D + E+ + N+CTIVP G+V FFPSY++
Sbjct: 592 KTHLFASTVSRGPTGIPFKWTFANRGNTDMMDELGRVLLNVCTIVPDGVVVFFPSYNFLS 651
Query: 393 AIVYNY 398
I+Y +
Sbjct: 652 TILYRF 657
>sp|A7UXD4|CHL1_NEUCR ATP-dependent RNA helicase chl-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=chl-1 PE=3 SV=1
Length = 1073
Score = 169 bits (427), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 101/274 (36%), Positives = 150/274 (54%), Gaps = 33/274 (12%)
Query: 437 EEAPSQVQEDQVRNPML-SVVTFLESLVNKNEDGRILVTKNP----ELSKSHIKYILLNP 491
EEA ++++ Q R P+L ++ +FL +L N + +GRI K P EL + Y+LL+P
Sbjct: 633 EEAETEIKARQGRPPVLHTLCSFLTALTNLSSEGRIFYEKIPPPRGELQDMKLSYMLLSP 692
Query: 492 ANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLI 551
+ F+ I + AR++I+AGGTM P ++K LF VP +I SCGHVIP +N+
Sbjct: 693 THAFSSIAESARAVILAGGTMSPFEDYKAHLFPD--VPPEKITTLSCGHVIPPDNLCVWT 750
Query: 552 LCSGPTNRK---------FDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDY- 601
L S N K FD TF R+ + + + + + NLC++VP G+V FFPSY Y
Sbjct: 751 LGSIAPNPKVDTGIGEDCFDFTFAKRSNPNMINRLGLVLLNLCSVVPDGVVAFFPSYGYL 810
Query: 602 EAIVYNYMRDNHFI---ERIARIAKKKVVFREPKKTSEVDKVLSDYGTSVEK-------- 650
E ++ + + R+ KK +F + KT ++ L Y +
Sbjct: 811 EEVIGVWKTHEQAMGPKTIWERLESKKALFID-SKTESSEQTLQKYSDVIHSEVRPLSPA 869
Query: 651 ----GGALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
GA++LSVIGGK+SEG+NFSD LGRCVVV+
Sbjct: 870 GSRVKGAMLLSVIGGKMSEGINFSDRLGRCVVVV 903
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 103/179 (57%), Gaps = 16/179 (8%)
Query: 227 EEAPSQVQEDQVRNPML-SVVTFLESLVNKNEDGRILVTKNP----ELSKSHIKYILLNP 281
EEA ++++ Q R P+L ++ +FL +L N + +GRI K P EL + Y+LL+P
Sbjct: 633 EEAETEIKARQGRPPVLHTLCSFLTALTNLSSEGRIFYEKIPPPRGELQDMKLSYMLLSP 692
Query: 282 ANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLI 341
+ F+ I + AR++I+AGGTM P ++K LF VP +I SCGHVIP +N+
Sbjct: 693 THAFSSIAESARAVILAGGTMSPFEDYKAHLFPD--VPPEKITTLSCGHVIPPDNLCVWT 750
Query: 342 LCSGPTNRK---------FDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDY 391
L S N K FD TF R+ + + + + + NLC++VP G+V FFPSY Y
Sbjct: 751 LGSIAPNPKVDTGIGEDCFDFTFAKRSNPNMINRLGLVLLNLCSVVPDGVVAFFPSYGY 809
>sp|Q1E5T3|CHL1_COCIM ATP-dependent RNA helicase CHL1 OS=Coccidioides immitis (strain RS)
GN=CHL1 PE=3 SV=1
Length = 861
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/279 (35%), Positives = 158/279 (56%), Gaps = 20/279 (7%)
Query: 414 LQSFLKGVQENNPNLSKPSEGGIEEAPSQVQ---EDQVRNPML-SVVTFLESLVNKNEDG 469
L + +QE+ L++ +G IE + S + E P+L V +FL SL+N + +G
Sbjct: 468 LHKLSRYLQESK--LARKVDGYIESSTSLEEKNPETSTTVPVLFQVQSFLLSLMNPSAEG 525
Query: 470 RILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVP 529
R+ KN + +KY LL+P HF + V++AR++I+AGGTM P+S+++D LF L
Sbjct: 526 RLFFEKNG--NDVLLKYTLLDPTAHFREAVEEARAVILAGGTMSPMSDYRDHLFSYLAPG 583
Query: 530 ESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVP 589
+ R FS GHVIP N+ + G + +FD TFE R + ++ TI+ +C P
Sbjct: 584 QLRT--FSYGHVIPTSNLSARPVSRGILDTEFDFTFEKRNSRAMIIDLGKTISEICKATP 641
Query: 590 KGMVCFFPSYDYEAIVYNYMR-------DNHFIERIARIAKKKVVFREPKKTSEVDKVLS 642
G+V FFPSYD+ V + + ++ + + K +++ +K + +L
Sbjct: 642 DGVVAFFPSYDFLNQVVEIWKQPCSNSGNPSILDSLGLV--KPLLYESKEKAMNTEALLQ 699
Query: 643 DYGTSVEKG-GALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
Y +++G GAL+LSV+GGKLSEG+NFSD LGR V+V+
Sbjct: 700 KYANFIDEGKGALLLSVMGGKLSEGINFSDRLGRGVIVI 738
Score = 122 bits (307), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 110/192 (57%), Gaps = 10/192 (5%)
Query: 204 LQSFLKGVQENNPNLSKPPEGGIEEAPSQVQ---EDQVRNPML-SVVTFLESLVNKNEDG 259
L + +QE+ L++ +G IE + S + E P+L V +FL SL+N + +G
Sbjct: 468 LHKLSRYLQESK--LARKVDGYIESSTSLEEKNPETSTTVPVLFQVQSFLLSLMNPSAEG 525
Query: 260 RILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVP 319
R+ KN + +KY LL+P HF + V++AR++I+AGGTM P+S+++D LF L
Sbjct: 526 RLFFEKNG--NDVLLKYTLLDPTAHFREAVEEARAVILAGGTMSPMSDYRDHLFSYLAPG 583
Query: 320 ESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVP 379
+ R FS GHVIP N+ + G + +FD TFE R + ++ TI+ +C P
Sbjct: 584 QLRT--FSYGHVIPTSNLSARPVSRGILDTEFDFTFEKRNSRAMIIDLGKTISEICKATP 641
Query: 380 KGMVCFFPSYDY 391
G+V FFPSYD+
Sbjct: 642 DGVVAFFPSYDF 653
>sp|Q2U587|CHL1_ASPOR ATP-dependent RNA helicase chl1 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=chl1 PE=3 SV=1
Length = 721
Score = 157 bits (397), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/282 (36%), Positives = 154/282 (54%), Gaps = 37/282 (13%)
Query: 419 KGVQENNP----------NLSKPSEGGIEEAPSQVQEDQVRNP----MLSVVTFLESLVN 464
KGV + NP L++ +G E + + R P + + +FL L+N
Sbjct: 334 KGVDQINPYKLCRYLRESKLARKVDGYSEFSRERADRQADRKPSTPVLFHIQSFLLPLMN 393
Query: 465 KNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFG 524
+ +G++ K +KY+LL+P N F +IV DAR++I+AGGTM P++++ LF
Sbjct: 394 LSAEGKLFYIKAQ--GDIQLKYMLLDPMNQFREIVDDARAVILAGGTMSPMTDYIHHLFP 451
Query: 525 SLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNL 584
VP SR+ FS GHVIP EN++ +L G T +FD TFE R D+ +
Sbjct: 452 Y--VPSSRLGTFSYGHVIPPENLIAQVLGKGVTGTEFDFTFETR---DSER--------- 497
Query: 585 CTIVPKGMVCFFPSYDYEAIVYNYMRDNHFIER----IARIAKKKVVFREPKK-TSEVDK 639
++P G+V FFPSYDY + V + + E+ I KK + E + T ++
Sbjct: 498 -MVIPDGVVAFFPSYDYLSQVLSIWKRTLAGEKNRTVYDLIEGKKTILHESRDVTISTEE 556
Query: 640 VLSDYGTSVEKG-GALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
+L +Y + V G GAL+LSV+GGKLSEG+NFSD LGR V+++
Sbjct: 557 LLQEYASIVGSGRGALLLSVVGGKLSEGINFSDRLGRGVLIV 598
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 105/197 (53%), Gaps = 31/197 (15%)
Query: 209 KGVQENNP----------NLSKPPEGGIEEAPSQVQEDQVRNP----MLSVVTFLESLVN 254
KGV + NP L++ +G E + + R P + + +FL L+N
Sbjct: 334 KGVDQINPYKLCRYLRESKLARKVDGYSEFSRERADRQADRKPSTPVLFHIQSFLLPLMN 393
Query: 255 KNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFG 314
+ +G++ K +KY+LL+P N F +IV DAR++I+AGGTM P++++ LF
Sbjct: 394 LSAEGKLFYIKAQ--GDIQLKYMLLDPMNQFREIVDDARAVILAGGTMSPMTDYIHHLFP 451
Query: 315 SLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNL 374
VP SR+ FS GHVIP EN++ +L G T +FD TFE R D+ +
Sbjct: 452 Y--VPSSRLGTFSYGHVIPPENLIAQVLGKGVTGTEFDFTFETR---DSER--------- 497
Query: 375 CTIVPKGMVCFFPSYDY 391
++P G+V FFPSYDY
Sbjct: 498 -MVIPDGVVAFFPSYDY 513
>sp|Q6CAX3|CHL1_YARLI ATP-dependent RNA helicase CHL1 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=CHL1 PE=3 SV=1
Length = 803
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/225 (39%), Positives = 137/225 (60%), Gaps = 12/225 (5%)
Query: 458 FLESLVNKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSE 517
FL + N + +G +L P + +KY LL+P+ F DIV++AR +++AGGTMEP +
Sbjct: 469 FLRQVNNPDSEG-VLCFDGP----TKLKYQLLDPSEPFKDIVENARCVVLAGGTMEPTGD 523
Query: 518 FKDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEI 577
+ + L L + +I FSCGHVIP +N+ ++ +GP N F+ TF+ R + ++
Sbjct: 524 YLEYLLPYLS--QDQIKLFSCGHVIPPQNLSVQVIPNGP-NYSFNFTFDKRNDEKMILDV 580
Query: 578 AMTITNLCTIVPKGMVCFFPSYDY-EAIVYNYMRDNHFIERIARIAK-KKVVFREPKKTS 635
A+T+ I+P+GMV FFPSY Y E +V + + + I I +K +F E + S
Sbjct: 581 AITLLVYSKIIPEGMVVFFPSYKYLEQVVAVWKKAKKDGKNIYEILNDQKRIFVESQHDS 640
Query: 636 EVDKVLSDYGTSVEKGGALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
V+K LS+Y V K GA++LSV+GGK+SEG+NFSD L R V ++
Sbjct: 641 -VEKTLSEYAEEVPK-GAILLSVVGGKMSEGINFSDGLARAVFMI 683
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 88/144 (61%), Gaps = 8/144 (5%)
Query: 248 FLESLVNKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSE 307
FL + N + +G +L P + +KY LL+P+ F DIV++AR +++AGGTMEP +
Sbjct: 469 FLRQVNNPDSEG-VLCFDGP----TKLKYQLLDPSEPFKDIVENARCVVLAGGTMEPTGD 523
Query: 308 FKDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEI 367
+ + L L + +I FSCGHVIP +N+ ++ +GP N F+ TF+ R + ++
Sbjct: 524 YLEYLLPYLS--QDQIKLFSCGHVIPPQNLSVQVIPNGP-NYSFNFTFDKRNDEKMILDV 580
Query: 368 AMTITNLCTIVPKGMVCFFPSYDY 391
A+T+ I+P+GMV FFPSY Y
Sbjct: 581 AITLLVYSKIIPEGMVVFFPSYKY 604
>sp|A7TTL0|CHL1_VANPO ATP-dependent RNA helicase CHL1 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=CHL1 PE=3 SV=1
Length = 829
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 129/232 (55%), Gaps = 21/232 (9%)
Query: 452 MLSVVTFLESLVNKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGT 511
+ V +FL SL N NE+G+ KN IKY+LL P+ F I+ +AR +I+AGGT
Sbjct: 500 LFKVASFLSSLTNPNEEGKFFFEKNKS-----IKYMLLEPSQSFKSILDEARCVILAGGT 554
Query: 512 MEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKG 571
MEP+S+F D LF + +S F+C HVIP +N+ I+ KF+ TF+ R
Sbjct: 555 MEPISDFFDNLFPDIIKDKSVT--FACDHVIPDDNLNTYII----EEPKFEFTFDKRQNP 608
Query: 572 DTL-KEIAMTITNLCTIVPK--GMVCFFPSYDYEAIVYNYMRDNHFIERIARIAKKKVVF 628
+ + K + L VP G+V FFPSY Y V + R N +++ +I + +F
Sbjct: 609 ELVNKHLFQFFIKLSVNVPPTGGIVAFFPSYSYLQFVIDNWRSNGLFDKLNKI---REIF 665
Query: 629 REPKKTSEVDKVLSDYGTSVE-KGGALMLSVIGGKLSEGLNFSDDLGRCVVV 679
E K S+ L +Y +E + A++ +V+GGKLSEG+NF DDL R VV+
Sbjct: 666 YESKNGSD---PLDEYIKVIEARNPAILFAVVGGKLSEGINFQDDLCRAVVM 714
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 122/249 (48%), Gaps = 30/249 (12%)
Query: 242 MLSVVTFLESLVNKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGT 301
+ V +FL SL N NE+G+ KN IKY+LL P+ F I+ +AR +I+AGGT
Sbjct: 500 LFKVASFLSSLTNPNEEGKFFFEKNKS-----IKYMLLEPSQSFKSILDEARCVILAGGT 554
Query: 302 MEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKG 361
MEP+S+F D LF + +S F+C HVIP +N+ I+ KF+ TF+ R
Sbjct: 555 MEPISDFFDNLFPDIIKDKSVT--FACDHVIPDDNLNTYII----EEPKFEFTFDKRQNP 608
Query: 362 DTL-KEIAMTITNLCTIVPK--GMVCFFPSYDY-EAIVYNYMPD-----IEKTQE----- 407
+ + K + L VP G+V FFPSY Y + ++ N+ + + K +E
Sbjct: 609 ELVNKHLFQFFIKLSVNVPPTGGIVAFFPSYSYLQFVIDNWRSNGLFDKLNKIREIFYES 668
Query: 408 KPKLSGLQSFLKGVQENNPNLSKPSEGGIEEAPSQVQEDQVRNPMLSVVTFLESLVNKNE 467
K L ++K ++ NP + GG Q+D R +++ + + +
Sbjct: 669 KNGSDPLDEYIKVIEARNPAILFAVVGGKLSEGINFQDDLCRAVVMTGLPYPNVM----- 723
Query: 468 DGRILVTKN 476
G +L+ KN
Sbjct: 724 SGELLIKKN 732
>sp|P22516|CHL1_YEAST ATP-dependent RNA helicase CHL1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CHL1 PE=1 SV=1
Length = 861
Score = 140 bits (352), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/234 (39%), Positives = 127/234 (54%), Gaps = 23/234 (9%)
Query: 452 MLSVVTFLESLVNKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGT 511
+ V FL L N +G+ KN IKY+LL P+ F I+ A+ +++AGGT
Sbjct: 531 LFKVSQFLYCLTNLTSEGQFFFEKN-----YSIKYMLLEPSKPFESILNQAKCVVLAGGT 585
Query: 512 MEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNR-KFDLTFENRTK 570
MEP+SEF L VP I SC HVIPKEN+ I TN+ + + TFE R
Sbjct: 586 MEPMSEFLSNLLPE--VPSEDITTLSCNHVIPKENLQTYI-----TNQPELEFTFEKRMS 638
Query: 571 GDTL-KEIAMTITNLCTIVPK--GMVCFFPSYDYEAIVYNYMRDNHFIERIARIAKKKVV 627
+ + +L VPK G+V FFPSY Y A V + N +R A + + +
Sbjct: 639 PSLVNNHLFQFFVDLSKAVPKKGGIVAFFPSYQYLAHVIQCWKQN---DRFATLNNVRKI 695
Query: 628 FREPKKTSEVDKVLSDYGTSVEKG-GALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
F E K + D +LS Y SV +G G+L+L+++GGKLSEG+NF DDL R VV++
Sbjct: 696 FYEAK---DGDDILSGYSDSVAEGRGSLLLAIVGGKLSEGINFQDDLCRAVVMV 746
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 80/158 (50%), Gaps = 16/158 (10%)
Query: 242 MLSVVTFLESLVNKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGT 301
+ V FL L N +G+ KN IKY+LL P+ F I+ A+ +++AGGT
Sbjct: 531 LFKVSQFLYCLTNLTSEGQFFFEKN-----YSIKYMLLEPSKPFESILNQAKCVVLAGGT 585
Query: 302 MEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNR-KFDLTFENRTK 360
MEP+SEF L VP I SC HVIPKEN+ I TN+ + + TFE R
Sbjct: 586 MEPMSEFLSNLLPE--VPSEDITTLSCNHVIPKENLQTYI-----TNQPELEFTFEKRMS 638
Query: 361 GDTL-KEIAMTITNLCTIVPK--GMVCFFPSYDYEAIV 395
+ + +L VPK G+V FFPSY Y A V
Sbjct: 639 PSLVNNHLFQFFVDLSKAVPKKGGIVAFFPSYQYLAHV 676
>sp|A6ZWN8|CHL1_YEAS7 ATP-dependent RNA helicase CHL1 OS=Saccharomyces cerevisiae (strain
YJM789) GN=CHL1 PE=3 SV=1
Length = 861
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/234 (39%), Positives = 127/234 (54%), Gaps = 23/234 (9%)
Query: 452 MLSVVTFLESLVNKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGT 511
+ V FL L N +G+ KN IKY+LL P+ F I+ A+ +++AGGT
Sbjct: 531 LFKVSQFLYCLTNLTSEGQFFFEKN-----YSIKYMLLEPSKPFESILNQAKCVVLAGGT 585
Query: 512 MEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNR-KFDLTFENRTK 570
MEP+SEF L VP I SC HVIPKEN+ I TN+ + + TFE R
Sbjct: 586 MEPMSEFLSNLLPE--VPSKDITTLSCNHVIPKENLQTYI-----TNQPELEFTFEKRMS 638
Query: 571 GDTL-KEIAMTITNLCTIVPK--GMVCFFPSYDYEAIVYNYMRDNHFIERIARIAKKKVV 627
+ + +L VPK G+V FFPSY Y A V + N +R A + + +
Sbjct: 639 PSLVNNHLFQFFVDLSKAVPKKGGIVAFFPSYQYLAHVIQCWKQN---DRFATLNNVRKI 695
Query: 628 FREPKKTSEVDKVLSDYGTSVEKG-GALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
F E K + D +LS Y SV +G G+L+L+++GGKLSEG+NF DDL R VV++
Sbjct: 696 FYEAK---DGDDILSGYSDSVAEGRGSLLLAIVGGKLSEGINFQDDLCRAVVMV 746
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 80/158 (50%), Gaps = 16/158 (10%)
Query: 242 MLSVVTFLESLVNKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGT 301
+ V FL L N +G+ KN IKY+LL P+ F I+ A+ +++AGGT
Sbjct: 531 LFKVSQFLYCLTNLTSEGQFFFEKN-----YSIKYMLLEPSKPFESILNQAKCVVLAGGT 585
Query: 302 MEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNR-KFDLTFENRTK 360
MEP+SEF L VP I SC HVIPKEN+ I TN+ + + TFE R
Sbjct: 586 MEPMSEFLSNLLPE--VPSKDITTLSCNHVIPKENLQTYI-----TNQPELEFTFEKRMS 638
Query: 361 GDTL-KEIAMTITNLCTIVPK--GMVCFFPSYDYEAIV 395
+ + +L VPK G+V FFPSY Y A V
Sbjct: 639 PSLVNNHLFQFFVDLSKAVPKKGGIVAFFPSYQYLAHV 676
>sp|O14147|CHL1_SCHPO ATP-dependent RNA helicase chl1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=chl1 PE=3 SV=1
Length = 844
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 132/244 (54%), Gaps = 19/244 (7%)
Query: 444 QEDQVRNPMLSVVTFLESLVNKNEDGRILVTK----NPELSKSHIKYILLNPANHFTDIV 499
+ED ++ + +FL ++ N +G++ K NP ++KY+LL+P+ H +
Sbjct: 502 EEDPYTPVLMQLESFLLNIANPAPEGKLFYEKQTGDNP-----YLKYLLLDPSKHVEILT 556
Query: 500 QDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNR 559
+ RS+ +AGGTM P+ +F LF +SRI FSC H++P ENI +++ GP
Sbjct: 557 EQCRSVNLAGGTMSPIDDFITLLFSD---EQSRILPFSCDHIVPPENITTILVSQGPAGV 613
Query: 560 KFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYEAIVYNYMRDNHFIERIA 619
F+ T + + + LK++ T N +I+P G+V FFPS+ + N
Sbjct: 614 PFEFTHKRKDDENLLKDLGRTFQNFISIIPDGVVVFFPSFAFLQQAVKVWEMNGITN--- 670
Query: 620 RIAKKKVVFREPKKTSE--VDKVLSDYGTSVEKG-GALMLSVIGGKLSEGLNFSDDLGRC 676
R+ KK +F E K + +D Y SV+ G ++ SVIGG+LSEG+NFSD LGR
Sbjct: 671 RLNAKKPLFIESKDFGDNPLD-TFEHYKQSVDAGLSGMLFSVIGGRLSEGINFSDKLGRA 729
Query: 677 VVVM 680
V+V+
Sbjct: 730 VMVV 733
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 91/162 (56%), Gaps = 12/162 (7%)
Query: 234 QEDQVRNPMLSVVTFLESLVNKNEDGRILVTK----NPELSKSHIKYILLNPANHFTDIV 289
+ED ++ + +FL ++ N +G++ K NP ++KY+LL+P+ H +
Sbjct: 502 EEDPYTPVLMQLESFLLNIANPAPEGKLFYEKQTGDNP-----YLKYLLLDPSKHVEILT 556
Query: 290 QDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNR 349
+ RS+ +AGGTM P+ +F LF +SRI FSC H++P ENI +++ GP
Sbjct: 557 EQCRSVNLAGGTMSPIDDFITLLFSD---EQSRILPFSCDHIVPPENITTILVSQGPAGV 613
Query: 350 KFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDY 391
F+ T + + + LK++ T N +I+P G+V FFPS+ +
Sbjct: 614 PFEFTHKRKDDENLLKDLGRTFQNFISIIPDGVVVFFPSFAF 655
>sp|Q750G3|CHL1_ASHGO ATP-dependent RNA helicase CHL1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CHL1
PE=3 SV=1
Length = 801
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 133/237 (56%), Gaps = 23/237 (9%)
Query: 448 VRNPML-SVVTFLESLVNKNEDGRILVTKNPELSKSHI-KYILLNPANHFTDIVQDARSI 505
++ P+L V +FL++L N +E+G+ H+ KY+LL P+ IV +A+ +
Sbjct: 472 IKQPILFKVASFLKTLANPSEEGQFF------FENGHVLKYMLLEPSEVLKSIVTEAKCV 525
Query: 506 IVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTF 565
I+AGGTMEPV++F QL L + + +SCGHVIP +N+ I+ + F+ TF
Sbjct: 526 ILAGGTMEPVNDFFTQLVPYLAPTD--VTTYSCGHVIPDDNLNAFIV-----SENFEFTF 578
Query: 566 ENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYEAIVYNYMRDNHFIERIARIAKKK 625
NR ++ + I L + VP GMV FF SY Y V D + R+ I K
Sbjct: 579 ANREDIALIERLFHFIYQLASRVPFGMVVFFSSYKYIDFVVKTWTDRGLLSRLDAI---K 635
Query: 626 VVFREPKKTSEVDKVLSDYGTSV--EKGGALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
++ E TS+ VL Y ++ EK GA++L+V+GG+LSEG+NF ++L R VV++
Sbjct: 636 RIYHE---TSDGADVLKGYSETIQSEKKGAILLAVVGGRLSEGINFENELARAVVLV 689
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 89/166 (53%), Gaps = 15/166 (9%)
Query: 238 VRNPML-SVVTFLESLVNKNEDGRILVTKNPELSKSHI-KYILLNPANHFTDIVQDARSI 295
++ P+L V +FL++L N +E+G+ H+ KY+LL P+ IV +A+ +
Sbjct: 472 IKQPILFKVASFLKTLANPSEEGQFF------FENGHVLKYMLLEPSEVLKSIVTEAKCV 525
Query: 296 IVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTF 355
I+AGGTMEPV++F QL L + + +SCGHVIP +N+ I+ + F+ TF
Sbjct: 526 ILAGGTMEPVNDFFTQLVPYLAPTD--VTTYSCGHVIPDDNLNAFIV-----SENFEFTF 578
Query: 356 ENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYEAIVYNYMPD 401
NR ++ + I L + VP GMV FF SY Y V D
Sbjct: 579 ANREDIALIERLFHFIYQLASRVPFGMVVFFSSYKYIDFVVKTWTD 624
>sp|A5DUW8|CHL1_LODEL ATP-dependent RNA helicase CHL1 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=CHL1 PE=3 SV=1
Length = 892
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 138/256 (53%), Gaps = 22/256 (8%)
Query: 435 GIEEAPSQVQEDQVRNPMLSVVTFLESLVNKNEDGRILVTK------NPELSKSHIKYIL 488
G+E+ + + + + +V FL+ L ++G+ + E+S + Y+L
Sbjct: 532 GVEDVGTDFKLNSSSPILFDIVKFLKCLSYPKKEGKFFWDRIYGDNGGCEVS---LNYML 588
Query: 489 LNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKEN-- 546
L+P F +IV A+ +I+ GGTMEP S+F D LF S + ++I F+CGH+IPK N
Sbjct: 589 LDPCAVFKEIVDQAKCVILCGGTMEPTSDFTDYLFPS--IKHNKIKKFACGHIIPKNNLK 646
Query: 547 ILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYEAIVY 606
++P+ G FD + R D K + + +C IVP G+V F SY + +
Sbjct: 647 VIPV----GQYYGNFDFLYNRRNDLDQFKRLGEFLIKICEIVPAGIVVFISSYQLLSDIV 702
Query: 607 NYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDYG--TSVEKGGALMLSVIGGKLS 664
R+ R+ + K VF E + +++ +LS+Y + + GA++L+V+GGK+S
Sbjct: 703 KIWRETTIYSRLNLL---KQVFEESVENTKLTSLLSEYSYVINTQCKGAILLAVVGGKMS 759
Query: 665 EGLNFSDDLGRCVVVM 680
EG+NFSD+L R V+++
Sbjct: 760 EGINFSDNLARAVIMV 775
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 100/207 (48%), Gaps = 24/207 (11%)
Query: 225 GIEEAPSQVQEDQVRNPMLSVVTFLESLVNKNEDGRILVTK------NPELSKSHIKYIL 278
G+E+ + + + + +V FL+ L ++G+ + E+S + Y+L
Sbjct: 532 GVEDVGTDFKLNSSSPILFDIVKFLKCLSYPKKEGKFFWDRIYGDNGGCEVS---LNYML 588
Query: 279 LNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKEN-- 336
L+P F +IV A+ +I+ GGTMEP S+F D LF S + ++I F+CGH+IPK N
Sbjct: 589 LDPCAVFKEIVDQAKCVILCGGTMEPTSDFTDYLFPS--IKHNKIKKFACGHIIPKNNLK 646
Query: 337 ILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYEAIVY 396
++P+ G FD + R D K + + +C IVP G+V F S Y
Sbjct: 647 VIPV----GQYYGNFDFLYNRRNDLDQFKRLGEFLIKICEIVPAGIVVFISS-------Y 695
Query: 397 NYMPDIEKTQEKPKLSGLQSFLKGVQE 423
+ DI K + + + LK V E
Sbjct: 696 QLLSDIVKIWRETTIYSRLNLLKQVFE 722
>sp|Q86AS6|SYHC_DICDI Histidine--tRNA ligase, cytoplasmic OS=Dictyostelium discoideum
GN=hisS PE=3 SV=1
Length = 481
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 113/192 (58%), Gaps = 23/192 (11%)
Query: 1 MVGEKNLSPEVADKIGEYV-LKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQI 59
MV K L VADKI ++V LK + L+++L A +K A E L ++ LF Y +
Sbjct: 236 MVEVKALDGAVADKIEKFVSLKDEPIKLLQHLRATGMCDGNKDATEALSQLETLFGYLEC 295
Query: 60 YGLKDTIVFDLSLARGLDYYTGVIYEAVLKDQ-AVGSVAGGGRYDNLVGMFDPKNKTTPC 118
+G+ I+FDLSLARGLDYYTG+IYEAVL Q VGS+A GGRYD LVGM+ K+ P
Sbjct: 296 FGVTQHILFDLSLARGLDYYTGIIYEAVLTGQDRVGSIAAGGRYDGLVGMYGKKD--VPA 353
Query: 119 VAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYVASAQKNL 178
V IG+ER+F+I+E+ ++ K++ +TQV+V +K+L
Sbjct: 354 VGF-------------------SIGIERIFTILEDEYKKENKKIRENATQVFVVQMEKDL 394
Query: 179 VEPRMQLCHELW 190
++ R+ + ELW
Sbjct: 395 IKERLAIVSELW 406
>sp|O43011|SYH_SCHPO Histidine--tRNA ligase, mitochondrial OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=hts1 PE=1 SV=2
Length = 563
Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 107/221 (48%), Gaps = 49/221 (22%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MV EK L EVADKI EYVL G L++ L AD L+ + A ++LLF Y + +
Sbjct: 286 MVVEKGLKEEVADKIKEYVLLKGDRSLLDKLEADSLLSSNSSAVAAFNDMRLLFDYLEAF 345
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVLKDQA--------------------------VG 94
G+ D FD+SLARGLDYYTG+IYEAV + A VG
Sbjct: 346 GVLDRFSFDMSLARGLDYYTGIIYEAVTEASAPKIKSSAEKKKSADPEADRSNDDSIGVG 405
Query: 95 SVAGGGRYDNLVGMFDP-KNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIEN 153
S+A GGRYDNLVGMF KN PCV L G+ER+FSI+ +
Sbjct: 406 SIAAGGRYDNLVGMFAAKKNAKIPCVGISL-------------------GLERIFSILRS 446
Query: 154 RNAEQGVKVKTTSTQVYVASAQK---NLVEPRMQLCHELWG 191
+ ++ ++ V K ++ RM +C +LW
Sbjct: 447 KIPDEDIRANDVDVFVMAFGGGKEWTGFLKERMSVCKDLWA 487
>sp|Q6CIF0|CHL1_KLULA ATP-dependent RNA helicase CHL1 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=CHL1 PE=3 SV=1
Length = 807
Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 133/250 (53%), Gaps = 26/250 (10%)
Query: 439 APSQVQEDQ-----VRNPML-SVVTFLESLVNKNEDGRILVTKNPELSKSHIKYILLNPA 492
A S+++ D+ V+ P+L + F+ SL N + +G + IKY+LL P
Sbjct: 465 ADSKLKSDESNTNSVKQPILFKISKFVLSLSNPSFEGSFFFEEG-----MIIKYMLLEPN 519
Query: 493 NHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLIL 552
F IV D++ +I+AGGTM+P SEF + L VP I FSC H+IP+ N+ I+
Sbjct: 520 QIFKTIVNDSKCVILAGGTMQPTSEFIENLLP--FVPSKDIVQFSCNHIIPESNLDTFIV 577
Query: 553 CSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYEAIVYNYMRDN 612
G F+ +E+R + ++ + L VP G+V FFPSY Y V + +
Sbjct: 578 SEG-----FNFNYESRNNESVMCKLYDFLLELGCRVPHGIVVFFPSYGYLEHVIKFWQLE 632
Query: 613 HFIERIARIAKKKVVFREPKKTSEVDKVLSDYGTSV--EKGGALMLSVIGGKLSEGLNFS 670
E+++ K++ + P + +L Y +++ +K GA + SV+GGKLSEG+NF
Sbjct: 633 EIFEKLS--MNKRIFYETPGGSD----ILPQYSSTILDKKKGAFLFSVVGGKLSEGINFQ 686
Query: 671 DDLGRCVVVM 680
D+L R VV++
Sbjct: 687 DNLARAVVMV 696
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 88/169 (52%), Gaps = 18/169 (10%)
Query: 229 APSQVQEDQ-----VRNPML-SVVTFLESLVNKNEDGRILVTKNPELSKSHIKYILLNPA 282
A S+++ D+ V+ P+L + F+ SL N + +G + IKY+LL P
Sbjct: 465 ADSKLKSDESNTNSVKQPILFKISKFVLSLSNPSFEGSFFFEEG-----MIIKYMLLEPN 519
Query: 283 NHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLIL 342
F IV D++ +I+AGGTM+P SEF + L VP I FSC H+IP+ N+ I+
Sbjct: 520 QIFKTIVNDSKCVILAGGTMQPTSEFIENLLP--FVPSKDIVQFSCNHIIPESNLDTFIV 577
Query: 343 CSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDY 391
G F+ +E+R + ++ + L VP G+V FFPSY Y
Sbjct: 578 SEG-----FNFNYESRNNESVMCKLYDFLLELGCRVPHGIVVFFPSYGY 621
>sp|Q6FKT4|CHL1_CANGA ATP-dependent RNA helicase CHL1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=CHL1 PE=3 SV=1
Length = 830
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 133/250 (53%), Gaps = 24/250 (9%)
Query: 436 IEEAPSQVQEDQVRNPMLSVVT-FLESLVNKNEDGRILVTKNPELSKSHIKYILLNPANH 494
++E S + P+L ++ FLE L N + +G + P L +Y+LL P+
Sbjct: 485 LQEKESPSNQKPSSQPLLYKISKFLECLNNTSSEGSFFFERGPSL-----RYMLLEPSRI 539
Query: 495 FTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCS 554
F DI+ AR +I+AGGTMEPVS+ L L +S I FSC HVIP ++ I+
Sbjct: 540 FQDIIDSARCVILAGGTMEPVSQLLQYLVPKLD--DSSITKFSCNHVIPDSHLRTYIV-- 595
Query: 555 GPTNRKFDLTFENRTKGDTLKEIAMTI-TNLCTIVPK--GMVCFFPSYDY-EAIVYNYMR 610
+F+ TFE R + ++ L T +PK G++ FFPSY Y + I+ ++ +
Sbjct: 596 --NEPQFEFTFEKRNSVNLVQNHLFNFYLELSTTIPKTGGIIGFFPSYKYLDEIIVSWRK 653
Query: 611 DNHFIERIARIAKKKVVFREPKKTSEVDKVLSDYGTSVEKG-GALMLSVIGGKLSEGLNF 669
F ++ K++ VF E K + L DY ++V GA++ +++GGKLSEG+NF
Sbjct: 654 AGLF----EKLDKERKVFYEMKDGPD---PLPDYTSAVANSEGAILFAIVGGKLSEGINF 706
Query: 670 SDDLGRCVVV 679
+L R +V+
Sbjct: 707 GGNLCRAIVM 716
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 87/170 (51%), Gaps = 15/170 (8%)
Query: 226 IEEAPSQVQEDQVRNPMLSVVT-FLESLVNKNEDGRILVTKNPELSKSHIKYILLNPANH 284
++E S + P+L ++ FLE L N + +G + P L +Y+LL P+
Sbjct: 485 LQEKESPSNQKPSSQPLLYKISKFLECLNNTSSEGSFFFERGPSL-----RYMLLEPSRI 539
Query: 285 FTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCS 344
F DI+ AR +I+AGGTMEPVS+ L L +S I FSC HVIP ++ I+
Sbjct: 540 FQDIIDSARCVILAGGTMEPVSQLLQYLVPKLD--DSSITKFSCNHVIPDSHLRTYIV-- 595
Query: 345 GPTNRKFDLTFENRTKGDTLKEIAMTI-TNLCTIVPK--GMVCFFPSYDY 391
+F+ TFE R + ++ L T +PK G++ FFPSY Y
Sbjct: 596 --NEPQFEFTFEKRNSVNLVQNHLFNFYLELSTTIPKTGGIIGFFPSYKY 643
>sp|P07263|SYH_YEAST Histidine--tRNA ligase, mitochondrial OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=HTS1 PE=1 SV=2
Length = 546
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/223 (36%), Positives = 110/223 (49%), Gaps = 53/223 (23%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLL-ADEFLAKSKQAKEGLEAIKLLFHYCQI 59
M EK S E ADKIGEYV +G + + +L AD + +++AK+GL+ I L Y +
Sbjct: 252 MTEEKGQSEETADKIGEYVKLNGSLKEIHAVLSADANITSNEKAKQGLDDIATLMKYTEA 311
Query: 60 YGLKDTIVFDLSLARGLDYYTGVIYEAV------------LKDQA-----------VGSV 96
+ + I FDLSLARGLDYYTG+IYE V LK +A VGS+
Sbjct: 312 FDIDSFISFDLSLARGLDYYTGLIYEVVTSASAPPENASELKKKAKSAEDASEFVGVGSI 371
Query: 97 AGGGRYDNLVGMFD----PKNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIE 152
A GGRYDNLV MF K+ PCV GVER+FS+I+
Sbjct: 372 AAGGRYDNLVNMFSEASGKKSTQIPCVGISF-------------------GVERIFSLIK 412
Query: 153 NRNAEQGVKVKTTSTQVYVAS-----AQKNLVEPRMQLCHELW 190
R +K T+TQV+V + + RM++ +LW
Sbjct: 413 QR-INSSTTIKPTATQVFVMAFGGGKDWTGYLPERMKVTKQLW 454
>sp|P34183|SYH_CAEEL Histidine--tRNA ligase OS=Caenorhabditis elegans GN=hrs-1 PE=2 SV=3
Length = 521
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 111/212 (52%), Gaps = 47/212 (22%)
Query: 1 MVGEKNLSPEVADKIGEYVLKH------GHVDLVENLLADEFLAKSKQAKEGLEAIKLLF 54
M+ EK L+ E K+GE V +++L+E + L ++ + K+G E +K+L
Sbjct: 260 MINEKFLTKEQTGKLGELVRFRELNSDLNNLELLEKMSQLPDLGQNDKFKKGAEELKVLI 319
Query: 55 HYCQIYGLKDTIVFDLSLARGLDYYTGVIYEAVL------------KDQA-----VGSVA 97
Y + G+ T+ ++ SLARGLDYYTG IYEAV +D A VGSVA
Sbjct: 320 EYLNVDGVT-TVRYEPSLARGLDYYTGAIYEAVAPKALEGTAVENSEDTAGQPVGVGSVA 378
Query: 98 GGGRYDNLVGMFDPKNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAE 157
GGRYD LV MFD K PC C G+ERLF+I+E R
Sbjct: 379 AGGRYDGLVKMFDSK-ANVPC-------------------CGVSFGIERLFAIMEAR--- 415
Query: 158 QGVKVKTTSTQVYVASAQKNLVEPRMQLCHEL 189
Q V ++TT T+VYVASAQKNLV R +L L
Sbjct: 416 QKVAIRTTQTEVYVASAQKNLVRDRKKLVKML 447
>sp|P93422|SYH_ORYSJ Histidine--tRNA ligase OS=Oryza sativa subsp. japonica
GN=Os05g0150900 PE=2 SV=2
Length = 788
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 108/213 (50%), Gaps = 28/213 (13%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHG---HVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYC 57
+V EK +S E ADKIG+ V G V L +F+ + L +++LF
Sbjct: 548 LVDEKGISNETADKIGDLVKTRGPPLEVLLELRKEGSKFMGNAGSVT-ALNELEILFKAL 606
Query: 58 QIYGLKDTIVFDLSLARGLDYYTGVIYEAVLKDQA-VGSVAGGGRYDNLVGMFDPKNKTT 116
IVFDLSLARGLDYYTGVIYEAV K VGS+A GGRYDNLVGMF K
Sbjct: 607 DKANAIGKIVFDLSLARGLDYYTGVIYEAVFKGTTQVGSIAAGGRYDNLVGMF--SGKQV 664
Query: 117 PCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYVASAQK 176
P V L G+ER+F+I+E + E+ +++ T T+V V+ K
Sbjct: 665 PAVGVSL-------------------GIERVFAIMEQQEMEKN-QIRATETEVLVSIIGK 704
Query: 177 NLVEPRMQLCHELWGGEKTQEKPKLSGLQSFLK 209
+L+ +L ELW E + +Q+ LK
Sbjct: 705 DLILA-AELVSELWNAGIKAEFKLTTRIQNHLK 736
>sp|Q6E6B4|SYHC_ANTLO Probable histidine--tRNA ligase, cytoplasmic OS=Antonospora
locustae PE=3 SV=1
Length = 445
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 96/177 (54%), Gaps = 28/177 (15%)
Query: 17 EYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIYGLKDTIVFDLSLARGL 76
YV G +++++ L + E S K+G++ + LLF Y IYG+ D V DLSLARGL
Sbjct: 214 RYVCVSGGIEVIDTLRSGELYLYS-DGKKGIDDLALLFKYLGIYGVGDRAVVDLSLARGL 272
Query: 77 DYYTGVIYEAVLKD-QAVGSVAGGGRYDNLVGMFDPKNK--TTPCVAAKLLHEVQGLLET 133
DYYTGVI+EA L D + VGSVAGGGRYDNLV K + PCV L
Sbjct: 273 DYYTGVIFEAALVDFKDVGSVAGGGRYDNLVSSVLGKKSEWSVPCVGFSL---------- 322
Query: 134 SCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYVASAQKNLVEPRMQLCHELW 190
GV R+ S++ + + +TT T+V+V S+ L+E RM + LW
Sbjct: 323 ---------GVTRILSVMLKVD-----RRRTTETEVFVGSSGGLLLEERMGVLSRLW 365
>sp|Q5SXJ3|FANCJ_MOUSE Fanconi anemia group J protein homolog OS=Mus musculus GN=Brip1
PE=2 SV=1
Length = 1174
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 112/227 (49%), Gaps = 22/227 (9%)
Query: 466 NEDGRILVTKNPELSKSHI-----KYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKD 520
++ G + V KN + S+ I + LNPA F+DI R+I++ GT+ P+ F
Sbjct: 569 DKTGVLAVPKNKKHSRQKIGVNALNFWCLNPAVAFSDINDKVRTIVLTSGTLSPLKSFSS 628
Query: 521 QLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMT 580
+L + + HVI + + SGP R TF++ + E+ M
Sbjct: 629 ELGVTFSI------QLEANHVISNSQVWVGTVGSGPKGRNLCATFQHTETFEFQDEVGML 682
Query: 581 ITNLCTIVPKGMVCFFPSYD-YEAIVYNYMRDNHFIERIARIAKKKVVFREPK--KTSEV 637
+ ++C V +G++CF PSY E + ++ F + K V EP+ + ++
Sbjct: 683 LLSVCQTVSQGILCFLPSYKLLEKLRERWI----FTGLWHSLESVKTVIAEPQGGEKTDF 738
Query: 638 DKVLSDYGTSV----EKGGALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
D++L Y ++ EK GAL+++V GK+SEGL+FSDD R V+ +
Sbjct: 739 DELLQVYYDAIKFKGEKDGALLIAVCRGKVSEGLDFSDDNARAVITV 785
Score = 72.8 bits (177), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 21/172 (12%)
Query: 256 NEDGRILVTKNPELSKSHI-----KYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKD 310
++ G + V KN + S+ I + LNPA F+DI R+I++ GT+ P+ F
Sbjct: 569 DKTGVLAVPKNKKHSRQKIGVNALNFWCLNPAVAFSDINDKVRTIVLTSGTLSPLKSFSS 628
Query: 311 QLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMT 370
+L + + HVI + + SGP R TF++ + E+ M
Sbjct: 629 ELGVTFSI------QLEANHVISNSQVWVGTVGSGPKGRNLCATFQHTETFEFQDEVGML 682
Query: 371 ITNLCTIVPKGMVCFFPSYDYEAIVYNYMPDIEKTQEKPKLSGLQSFLKGVQ 422
+ ++C V +G++CF PSY +EK +E+ +GL L+ V+
Sbjct: 683 LLSVCQTVSQGILCFLPSYKL----------LEKLRERWIFTGLWHSLESVK 724
>sp|C4V9J0|SYHC_NOSCE Probable histidine--tRNA ligase, cytoplasmic OS=Nosema ceranae
(strain BRL01) GN=NCER_101238 PE=3 SV=1
Length = 430
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 95/177 (53%), Gaps = 33/177 (18%)
Query: 18 YVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIYGLKDTIVFDLSLARGLD 77
Y+ K G VD+++ L ++ K+ E ++ + L+ YC+I D ++ DLSLARGLD
Sbjct: 216 YIQKSGTVDVLDFLRENDVY---KKCSEAVDDLCKLYEYCKIMKCSDHLIIDLSLARGLD 272
Query: 78 YYTGVIYEAVLKDQAVGSVAGGGRYDNLVGMFDPKNKT----TPCVAAKLLHEVQGLLET 133
YYTG+I E ++ +GSVAGGGRYDNL+G + + T PC
Sbjct: 273 YYTGMIIEGKYLNKNIGSVAGGGRYDNLIGSLENSSYTNTYNVPCAGFS----------- 321
Query: 134 SCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYVASAQKNLVEPRMQLCHELW 190
IG+ R+FS I Q KV T+ +V+++++ K L+E R+++ LW
Sbjct: 322 --------IGLSRIFSCI------QKPKV-NTNVKVFISASGKLLLEERLKIQSILW 363
>sp|Q9BX63|FANCJ_HUMAN Fanconi anemia group J protein OS=Homo sapiens GN=BRIP1 PE=1 SV=1
Length = 1249
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 114/229 (49%), Gaps = 26/229 (11%)
Query: 466 NEDGRILVTKNPELSKSH-----IKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKD 520
+++G +++ KN + S+ + + LNPA F+DI ++I++ GT+ P+ F
Sbjct: 566 DKNGLLVLPKNKKRSRQKTAVHVLNFWCLNPAVAFSDINGKVQTIVLTSGTLSPMKSFSS 625
Query: 521 QLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMT 580
+L + + H+I + + SGP R TF+N + E+
Sbjct: 626 ELGVTFTI------QLEANHIIKNSQVWVGTIGSGPKGRNLCATFQNTETFEFQDEVGAL 679
Query: 581 ITNLCTIVPKGMVCFFPSYD-YEAIVYNYMRDN--HFIERIARIAKKKVVFREPK--KTS 635
+ ++C V +G++CF PSY E + ++ H +E + K V EP+ + +
Sbjct: 680 LLSVCQTVSQGILCFLPSYKLLEKLKERWLSTGLWHNLELV------KTVIVEPQGGEKT 733
Query: 636 EVDKVLSDYGTSV----EKGGALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
D++L Y ++ EK GAL+++V GK+SEGL+FSDD R V+ +
Sbjct: 734 NFDELLQVYYDAIKYKGEKDGALLVAVCRGKVSEGLDFSDDNARAVITI 782
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 67/139 (48%), Gaps = 11/139 (7%)
Query: 256 NEDGRILVTKNPELSKSH-----IKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKD 310
+++G +++ KN + S+ + + LNPA F+DI ++I++ GT+ P+ F
Sbjct: 566 DKNGLLVLPKNKKRSRQKTAVHVLNFWCLNPAVAFSDINGKVQTIVLTSGTLSPMKSFSS 625
Query: 311 QLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMT 370
+L + + H+I + + SGP R TF+N + E+
Sbjct: 626 ELGVTFTI------QLEANHIIKNSQVWVGTIGSGPKGRNLCATFQNTETFEFQDEVGAL 679
Query: 371 ITNLCTIVPKGMVCFFPSY 389
+ ++C V +G++CF PSY
Sbjct: 680 LLSVCQTVSQGILCFLPSY 698
>sp|Q3YK19|FANCJ_CHICK Fanconi anemia group J protein homolog OS=Gallus gallus GN=BRIP1
PE=2 SV=1
Length = 1252
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 18/204 (8%)
Query: 484 IKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIP 543
+ + LNPA F+D+ D R++++ GT+ P+ F +L + HVI
Sbjct: 600 LNFWCLNPAVAFSDL-NDVRTVVLTSGTLSPMDSFSSELGVKFSI------QLEANHVIR 652
Query: 544 KENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYEA 603
+ + +GP RK TF++ + E+ + ++C V +G++CF PSY
Sbjct: 653 NSQVWVGTIGTGPNGRKLCATFQHTETFEFQDEVGALLLSVCQKVGQGILCFLPSYK--- 709
Query: 604 IVYNYMRDNHFIERIAR-IAKKKVVFREPK--KTSEVDKVLSDYGTSV----EKGGALML 656
+ + ++D + R + K V EP+ S+ D++L Y ++ EK GAL++
Sbjct: 710 -LLDKLKDRWIHTGLWRNLELVKTVIAEPQGGAKSDFDELLKIYYDAIKFKGEKDGALLI 768
Query: 657 SVIGGKLSEGLNFSDDLGRCVVVM 680
+V GK+SEGL+F D+ R V+ +
Sbjct: 769 AVCRGKVSEGLDFCDENARAVITI 792
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 7/116 (6%)
Query: 274 IKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIP 333
+ + LNPA F+D+ D R++++ GT+ P+ F +L + HVI
Sbjct: 600 LNFWCLNPAVAFSDL-NDVRTVVLTSGTLSPMDSFSSELGVKFSI------QLEANHVIR 652
Query: 334 KENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSY 389
+ + +GP RK TF++ + E+ + ++C V +G++CF PSY
Sbjct: 653 NSQVWVGTIGTGPNGRKLCATFQHTETFEFQDEVGALLLSVCQKVGQGILCFLPSY 708
>sp|Q8SRR3|SYHC_ENCCU Probable histidine--tRNA ligase, cytoplasmic OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU06_0620 PE=3 SV=1
Length = 435
Score = 89.7 bits (221), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 89/181 (49%), Gaps = 26/181 (14%)
Query: 5 KNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIYGLKD 64
K LS E +Y+ G D++ L AD ++ K + ++ LF C+I G
Sbjct: 204 KGLSEEQVRTTKKYMTMGGKEDVLGLLKADPVYG-IERCKAAVHDMEELFRLCRILGCSG 262
Query: 65 TIVFDLSLARGLDYYTGVIYEAVLKDQAVGSVAGGGRYDNLVGMFDPKNKTTPCVAAKLL 124
++V D+SLARGLDYYTG+I EA ++VGSV GGGRYDNL + +TPCV
Sbjct: 263 SLVMDISLARGLDYYTGMILEAEYVGKSVGSVIGGGRYDNLTENLGERCVSTPCVGF--- 319
Query: 125 HEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYVASAQKNLVEPRMQ 184
+GV R+FS++ K +ST VYV ++ ++ R+
Sbjct: 320 ----------------SVGVSRIFSLLYEEYD------KESSTMVYVGASGGLFLDERLS 357
Query: 185 L 185
+
Sbjct: 358 V 358
>sp|B4NDG5|RTEL1_DROWI Regulator of telomere elongation helicase 1 homolog OS=Drosophila
willistoni GN=GK24923 PE=3 SV=1
Length = 998
Score = 89.4 bits (220), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 97/198 (48%), Gaps = 11/198 (5%)
Query: 484 IKYILLNPANHFTDIVQ-DARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 542
I + NP ++ RS+I+ GT+ P+ L L +P ++ H H++
Sbjct: 460 INFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKP----LIAELAIPVAQ--HLENPHIV 513
Query: 543 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYE 602
+ + I+ +GP ++ F+NR + + TI N+ IVP G++ FFPSY
Sbjct: 514 DQSQVYVKIIGTGPDRQQLISNFKNRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYPML 573
Query: 603 AIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDYGTSV-EKGGALMLSVIGG 661
+ + + A IA KK +F EP+ + + ++ ++ + GA ++V G
Sbjct: 574 NKCVDAWQTSGL---WADIAAKKPIFLEPRGKDQFTTTMEEFYQAIRDSKGACFMAVCRG 630
Query: 662 KLSEGLNFSDDLGRCVVV 679
K+SEGL+F+D GR V++
Sbjct: 631 KVSEGLDFADRNGRAVII 648
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 7/117 (5%)
Query: 274 IKYILLNPANHFTDIVQ-DARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 332
I + NP ++ RS+I+ GT+ P+ L L +P ++ H H++
Sbjct: 460 INFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKP----LIAELAIPVAQ--HLENPHIV 513
Query: 333 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSY 389
+ + I+ +GP ++ F+NR + + TI N+ IVP G++ FFPSY
Sbjct: 514 DQSQVYVKIIGTGPDRQQLISNFKNRDNPKYISSLGQTILNVSRIVPDGLLVFFPSY 570
>sp|Q7QEI1|RTEL1_ANOGA Regulator of telomere elongation helicase 1 homolog OS=Anopheles
gambiae GN=AGAP000634 PE=3 SV=5
Length = 991
Score = 89.4 bits (220), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 13/200 (6%)
Query: 484 IKYILLNPANHFTDIVQDA-RSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 542
I + NP +V RSII+ GT+ P+ F +L SL V S H+I
Sbjct: 455 INFWCFNPGFGMRQLVDSGTRSIILTSGTLAPLKPFISEL--SLPVAVS----LENPHII 508
Query: 543 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYE 602
+ + ++ GP + + +F+NR+ + + + T +LC I+P G++ FFPSY
Sbjct: 509 ARSQVYVKVITHGPDRVELNSSFKNRSNPEYIASLGRTALSLCPIIPGGLLIFFPSYPLL 568
Query: 603 AIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDYGTSVE---KGGALMLSVI 659
+ + +I+R+ K +F EP+ + +++Y V GA+ ++V
Sbjct: 569 NKCSEEWQASGIWGQISRL---KQIFVEPRGKDQFTTTMAEYYAQVRDPASRGAIFMAVC 625
Query: 660 GGKLSEGLNFSDDLGRCVVV 679
GK+SEGL+F+D GR V++
Sbjct: 626 RGKVSEGLDFADANGRAVMI 645
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 17/142 (11%)
Query: 274 IKYILLNPANHFTDIVQDA-RSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 332
I + NP +V RSII+ GT+ P+ F +L SL V S H+I
Sbjct: 455 INFWCFNPGFGMRQLVDSGTRSIILTSGTLAPLKPFISEL--SLPVAVS----LENPHII 508
Query: 333 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYE 392
+ + ++ GP + + +F+NR+ + + + T +LC I+P G++ FFPSY
Sbjct: 509 ARSQVYVKVITHGPDRVELNSSFKNRSNPEYIASLGRTALSLCPIIPGGLLIFFPSY--- 565
Query: 393 AIVYNYMPDIEKTQEKPKLSGL 414
P + K E+ + SG+
Sbjct: 566 -------PLLNKCSEEWQASGI 580
>sp|B4GU19|RTEL1_DROPE Regulator of telomere elongation helicase 1 homolog OS=Drosophila
persimilis GN=GL14463 PE=3 SV=1
Length = 1009
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 102/213 (47%), Gaps = 11/213 (5%)
Query: 469 GRILVTKNPELSKSHIKYILLNPANHFTDIVQ-DARSIIVAGGTMEPVSEFKDQLFGSLG 527
G I T + + + NP ++ RS+I+ GT+ P+ L L
Sbjct: 440 GNITTTGTSSKAAKIVNFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKP----LIAELA 495
Query: 528 VPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTI 587
+P ++ H H++ + + I+ +GP ++ F+NR + + TI N+ I
Sbjct: 496 IPVAQ--HLENPHIVDQSQVYVKIIGTGPDRQQLISNFKNRDNPKYISSLGQTILNVARI 553
Query: 588 VPKGMVCFFPSYDYEAIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDYGTS 647
VP G++ FFPSY + + + A I+ KK +F EP+ + + ++ +
Sbjct: 554 VPDGLLVFFPSYPMLNKCVDAWQASGL---WADISCKKPIFVEPRGKDQFTSTMEEFYQA 610
Query: 648 V-EKGGALMLSVIGGKLSEGLNFSDDLGRCVVV 679
+ + GA+ ++V GK+SEGL+F+D GR V++
Sbjct: 611 IRDSKGAVFMAVCRGKVSEGLDFADRNGRAVII 643
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 7/132 (5%)
Query: 259 GRILVTKNPELSKSHIKYILLNPANHFTDIVQ-DARSIIVAGGTMEPVSEFKDQLFGSLG 317
G I T + + + NP ++ RS+I+ GT+ P+ L L
Sbjct: 440 GNITTTGTSSKAAKIVNFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKP----LIAELA 495
Query: 318 VPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTI 377
+P ++ H H++ + + I+ +GP ++ F+NR + + TI N+ I
Sbjct: 496 IPVAQ--HLENPHIVDQSQVYVKIIGTGPDRQQLISNFKNRDNPKYISSLGQTILNVARI 553
Query: 378 VPKGMVCFFPSY 389
VP G++ FFPSY
Sbjct: 554 VPDGLLVFFPSY 565
>sp|Q29FS3|RTEL1_DROPS Regulator of telomere elongation helicase 1 homolog OS=Drosophila
pseudoobscura pseudoobscura GN=GA17940 PE=3 SV=2
Length = 1009
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 102/213 (47%), Gaps = 11/213 (5%)
Query: 469 GRILVTKNPELSKSHIKYILLNPANHFTDIVQ-DARSIIVAGGTMEPVSEFKDQLFGSLG 527
G I T + + + NP ++ RS+I+ GT+ P+ L L
Sbjct: 440 GNITTTGTSSKAAKIVNFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKP----LIAELA 495
Query: 528 VPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTI 587
+P ++ H H++ + + I+ +GP ++ F+NR + + TI N+ I
Sbjct: 496 IPVAQ--HLENPHIVDQSQVYVKIIGTGPDRQQLISNFKNRDNPKYISSLGQTILNVARI 553
Query: 588 VPKGMVCFFPSYDYEAIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDYGTS 647
VP G++ FFPSY + + + A I+ KK +F EP+ + + ++ +
Sbjct: 554 VPDGLLVFFPSYPMLNKCVDAWQASGL---WADISCKKPIFVEPRGKDQFTSTMEEFYQA 610
Query: 648 V-EKGGALMLSVIGGKLSEGLNFSDDLGRCVVV 679
+ + GA+ ++V GK+SEGL+F+D GR V++
Sbjct: 611 IRDSKGAVFMAVCRGKVSEGLDFADRNGRAVII 643
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 7/132 (5%)
Query: 259 GRILVTKNPELSKSHIKYILLNPANHFTDIVQ-DARSIIVAGGTMEPVSEFKDQLFGSLG 317
G I T + + + NP ++ RS+I+ GT+ P+ L L
Sbjct: 440 GNITTTGTSSKAAKIVNFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKP----LIAELA 495
Query: 318 VPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTI 377
+P ++ H H++ + + I+ +GP ++ F+NR + + TI N+ I
Sbjct: 496 IPVAQ--HLENPHIVDQSQVYVKIIGTGPDRQQLISNFKNRDNPKYISSLGQTILNVARI 553
Query: 378 VPKGMVCFFPSY 389
VP G++ FFPSY
Sbjct: 554 VPDGLLVFFPSY 565
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.136 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 268,424,440
Number of Sequences: 539616
Number of extensions: 11743738
Number of successful extensions: 33289
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 266
Number of HSP's successfully gapped in prelim test: 678
Number of HSP's that attempted gapping in prelim test: 31888
Number of HSP's gapped (non-prelim): 1113
length of query: 690
length of database: 191,569,459
effective HSP length: 124
effective length of query: 566
effective length of database: 124,657,075
effective search space: 70555904450
effective search space used: 70555904450
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)