Your job contains 1 sequence.
>psy1221
MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY
GLKDTIVFDLSLARGLDYYTGVIYEAVLKDQAVGSVAGGGRYDNLVGMFDPKNKTTPCVA
AKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYVASAQKNLVE
PRMQLCHELWGGEKTQEKPKLSGLQSFLKGVQENNPNLSKPPEGGIEEAPSQVQEDQVRN
PMLSVVTFLESLVNKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGG
TMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTK
GDTLKEIAMTITNLCTIVPKGMVCFFPSYDYEAIVYNYMPDIEKTQEKPKLSGLQSFLKG
VQENNPNLSKPSEGGIEEAPSQVQEDQVRNPMLSVVTFLESLVNKNEDGRILVTKNPELS
KSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGH
VIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYD
YEAIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDYGTSVEKGGALMLSVIG
GKLSEGLNFSDDLGRCVVVMCNSNPLRVPN
The BLAST search returned 9 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy1221
(690 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F1NN99 - symbol:DDX11 "Uncharacterized protein"... 686 3.7e-70 2
ZFIN|ZDB-GENE-041114-191 - symbol:ddx11 "DEAD/H (Asp-Glu-... 642 1.4e-68 2
UNIPROTKB|E2RGR5 - symbol:DDX11 "Uncharacterized protein"... 657 5.4e-67 2
RGD|1306675 - symbol:Ddx11 "DEAD/H (Asp-Glu-Ala-Asp/His) ... 647 2.0e-65 2
UNIPROTKB|E1BL06 - symbol:E1BL06 "Uncharacterized protein... 621 4.7e-65 3
MGI|MGI:2443590 - symbol:Ddx11 "DEAD/H (Asp-Glu-Ala-Asp/H... 621 1.1e-62 2
UNIPROTKB|Q96FC9 - symbol:DDX11 "Probable ATP-dependent R... 619 1.5e-62 2
UNIPROTKB|Q92771 - symbol:DDX12P "Putative ATP-dependent ... 614 6.5e-62 2
UNIPROTKB|F1SK84 - symbol:DDX11 "Uncharacterized protein"... 630 1.3e-61 1
UNIPROTKB|A8MPP1 - symbol:DDX11L8 "Putative ATP-dependent... 588 5.0e-59 2
UNIPROTKB|B3KWE1 - symbol:HARS "Histidyl-tRNA synthetase,... 491 6.9e-47 1
UNIPROTKB|B4DDD8 - symbol:HARS "Histidine--tRNA ligase, c... 491 6.9e-47 1
UNIPROTKB|B4E1C5 - symbol:HARS "Histidine--tRNA ligase, c... 491 6.9e-47 1
UNIPROTKB|C9JWK3 - symbol:HARS "Histidine--tRNA ligase, c... 491 6.9e-47 1
UNIPROTKB|D6REN6 - symbol:HARS "Histidine--tRNA ligase, c... 491 6.9e-47 1
UNIPROTKB|J3KNE5 - symbol:HARS "Histidine--tRNA ligase, c... 491 6.9e-47 1
UNIPROTKB|P12081 - symbol:HARS "Histidine--tRNA ligase, c... 491 6.9e-47 1
UNIPROTKB|F1RGD9 - symbol:HARS "Uncharacterized protein" ... 491 6.9e-47 1
MGI|MGI:108087 - symbol:Hars "histidyl-tRNA synthetase" s... 491 6.9e-47 1
TAIR|locus:2017894 - symbol:AT1G79890 species:3702 "Arabi... 495 8.4e-47 3
UNIPROTKB|Q2KI84 - symbol:HARS "Histidine--tRNA ligase, c... 490 8.8e-47 1
RGD|1310695 - symbol:Hars "histidyl-tRNA synthetase" spec... 490 8.8e-47 1
UNIPROTKB|F1LPB1 - symbol:Hars "Protein Hars" species:101... 490 8.8e-47 1
UNIPROTKB|E2QZ69 - symbol:HARS "Uncharacterized protein" ... 489 1.1e-46 1
UNIPROTKB|F1ND13 - symbol:HARS "Uncharacterized protein" ... 481 8.8e-46 1
UNIPROTKB|E2QZ43 - symbol:HARS2 "Uncharacterized protein"... 472 1.1e-44 1
UNIPROTKB|F6XKV4 - symbol:HARS2 "Uncharacterized protein"... 472 1.1e-44 1
UNIPROTKB|F1RGD8 - symbol:HARS2 "Uncharacterized protein"... 471 1.4e-44 1
UNIPROTKB|F1NTT1 - symbol:HARS2 "Uncharacterized protein"... 469 2.4e-44 1
FB|FBgn0026876 - symbol:CG11403 species:7227 "Drosophila ... 487 3.2e-44 1
UNIPROTKB|B4DDY8 - symbol:HARSL "Histidyl-tRNA synthetase... 465 6.9e-44 1
UNIPROTKB|B4DQ67 - symbol:HARS2 "Probable histidine--tRNA... 465 6.9e-44 1
UNIPROTKB|C9JHI8 - symbol:HARS2 "Probable histidine--tRNA... 465 6.9e-44 1
UNIPROTKB|C9JV49 - symbol:HARS2 "Probable histidine--tRNA... 465 6.9e-44 1
UNIPROTKB|E9PG66 - symbol:HARS2 "Probable histidine--tRNA... 465 6.9e-44 1
UNIPROTKB|P49590 - symbol:HARS2 "Probable histidine--tRNA... 465 6.9e-44 1
UNIPROTKB|F1NEE7 - symbol:HARS "Uncharacterized protein" ... 459 3.4e-43 1
ASPGD|ASPL0000038959 - symbol:AN10414 species:162425 "Eme... 471 8.5e-43 2
UNIPROTKB|A5D7V9 - symbol:HARS2 "Probable histidine--tRNA... 451 2.8e-42 1
UNIPROTKB|F1N0T6 - symbol:HARS2 "Probable histidine--tRNA... 451 2.8e-42 1
MGI|MGI:1918041 - symbol:Hars2 "histidyl-tRNA synthetase ... 439 6.3e-41 1
CGD|CAL0004313 - symbol:orf19.2000 species:5476 "Candida ... 446 2.4e-39 1
RGD|1308426 - symbol:Hars2 "histidyl-tRNA synthetase 2, m... 422 5.0e-39 1
UNIPROTKB|F1M9C9 - symbol:Hars2l "Protein Hars2l" species... 422 5.0e-39 1
UNIPROTKB|E7ETE2 - symbol:HARS "Histidine--tRNA ligase, c... 401 1.0e-36 1
WB|WBGene00010839 - symbol:chl-1 species:6239 "Caenorhabd... 420 2.2e-36 1
ZFIN|ZDB-GENE-040912-152 - symbol:hars "histidyl-tRNA syn... 375 8.1e-33 1
FB|FBgn0027087 - symbol:Aats-his "Histidyl-tRNA synthetas... 368 2.7e-31 1
SGD|S000005929 - symbol:CHL1 "Probable DNA helicase" spec... 363 5.5e-30 1
POMBASE|SPAC3G6.11 - symbol:chl1 "ATP-dependent DNA helic... 361 1.3e-29 2
DICTYBASE|DDB_G0274159 - symbol:hisS "histidine-tRNA liga... 264 3.8e-27 2
TAIR|locus:2075472 - symbol:AT3G02760 species:3702 "Arabi... 263 5.2e-19 1
GENEDB_PFALCIPARUM|MAL13P1.134 - symbol:MAL13P1.134 "heli... 260 1.6e-18 1
UNIPROTKB|Q8IE72 - symbol:MAL13P1.134 "DEAD box helicase,... 260 1.6e-18 1
ASPGD|ASPL0000062762 - symbol:AN0046 species:162425 "Emer... 252 3.2e-18 1
POMBASE|SPBC2G2.12 - symbol:hrs1 "mitochondrial and cytop... 249 7.2e-18 1
WB|WBGene00002001 - symbol:hars-1 species:6239 "Caenorhab... 241 4.5e-17 1
MGI|MGI:2442836 - symbol:Brip1 "BRCA1 interacting protein... 241 2.0e-16 1
SGD|S000006237 - symbol:HTS1 "Cytoplasmic and mitochondri... 230 8.3e-16 1
UNIPROTKB|J3QSE8 - symbol:BRIP1 "Fanconi anemia group J p... 231 1.9e-15 1
UNIPROTKB|E1BTS7 - symbol:Gga.49055 "Uncharacterized prot... 231 2.1e-15 1
UNIPROTKB|E1BTS6 - symbol:Gga.49055 "Uncharacterized prot... 231 2.2e-15 1
UNIPROTKB|F1NE49 - symbol:Gga.49055 "Uncharacterized prot... 231 2.2e-15 1
CGD|CAL0004839 - symbol:HTS1 species:5476 "Candida albica... 225 2.4e-15 1
UNIPROTKB|Q9BX63 - symbol:BRIP1 "Fanconi anemia group J p... 231 2.6e-15 1
WB|WBGene00001049 - symbol:dog-1 species:6239 "Caenorhabd... 229 3.0e-15 1
RGD|1307659 - symbol:Brip1 "BRCA1 interacting protein C-t... 234 1.1e-14 2
UNIPROTKB|B4GU19 - symbol:GL14463 "Regulator of telomere ... 223 1.4e-14 1
UNIPROTKB|Q29FS3 - symbol:GA17940 "Regulator of telomere ... 223 1.4e-14 1
UNIPROTKB|Q7QEI1 - symbol:AGAP000634 "Regulator of telome... 221 2.3e-14 1
UNIPROTKB|B4NDG5 - symbol:GK24923 "Regulator of telomere ... 220 2.9e-14 1
ZFIN|ZDB-GENE-081107-11 - symbol:brip1 "BRCA1 interacting... 221 3.0e-14 1
UNIPROTKB|D4ACW5 - symbol:Brip1 "Protein Brip1" species:1... 234 3.1e-14 2
UNIPROTKB|E1C1X9 - symbol:BRIP1 "Fanconi anemia group J p... 221 3.1e-14 1
UNIPROTKB|Q3YK19 - symbol:BRIP1 "Fanconi anemia group J p... 221 3.1e-14 1
FB|FBgn0029798 - symbol:CG4078 species:7227 "Drosophila m... 216 7.8e-14 1
UNIPROTKB|B4PZB4 - symbol:GE16425 "Regulator of telomere ... 216 7.8e-14 1
UNIPROTKB|B4I0K4 - symbol:GM12432 "Regulator of telomere ... 215 9.8e-14 1
UNIPROTKB|B3NSW1 - symbol:GG18780 "Regulator of telomere ... 215 1.0e-13 1
UNIPROTKB|G3N0I3 - symbol:BRIP1 "Uncharacterized protein"... 213 1.1e-13 1
UNIPROTKB|B3MSG8 - symbol:GF20802 "Regulator of telomere ... 213 1.7e-13 1
UNIPROTKB|E1BNG9 - symbol:BRIP1 "Uncharacterized protein"... 213 1.9e-13 1
WB|WBGene00021752 - symbol:Y50D7A.2 species:6239 "Caenorh... 209 2.1e-13 1
UNIPROTKB|F1MMS0 - symbol:BRIP1 "Uncharacterized protein"... 213 2.1e-13 1
UNIPROTKB|B4M891 - symbol:GJ16649 "Regulator of telomere ... 211 2.8e-13 1
UNIPROTKB|B4L1Z2 - symbol:GI15901 "Regulator of telomere ... 211 2.8e-13 1
UNIPROTKB|B4JNS2 - symbol:GH24089 "Regulator of telomere ... 210 3.5e-13 1
UNIPROTKB|F1MWN6 - symbol:RTEL1 "Regulator of telomere el... 205 4.9e-13 1
UNIPROTKB|J9NVZ8 - symbol:BRIP1 "Uncharacterized protein"... 208 7.6e-13 1
UNIPROTKB|E2RHN5 - symbol:BRIP1 "Uncharacterized protein"... 208 7.9e-13 1
UNIPROTKB|D6RA96 - symbol:RTEL1-TNFRSF6B "Protein RTEL1-T... 204 1.1e-12 1
UNIPROTKB|A4K436 - symbol:RTEL1 "Regulator of telomere el... 205 1.6e-12 1
UNIPROTKB|Q9NZ71 - symbol:RTEL1 "Regulator of telomere el... 204 2.1e-12 1
UNIPROTKB|F6WH68 - symbol:RTEL1 "Protein RTEL1-TNFRSF6B" ... 204 2.5e-12 1
UNIPROTKB|B0W9F4 - symbol:CPIJ003765 "Regulator of telome... 199 5.4e-12 1
TAIR|locus:2016209 - symbol:AT1G79950 species:3702 "Arabi... 198 7.5e-12 1
POMBASE|SPAC1D4.12 - symbol:rad15 "transcription factor T... 196 8.1e-12 1
ZFIN|ZDB-GENE-050306-11 - symbol:rtel1 "regulator of telo... 211 9.6e-12 2
UNIPROTKB|Q5RE34 - symbol:RTEL1 "Regulator of telomere el... 197 1.3e-11 1
MGI|MGI:2139369 - symbol:Rtel1 "regulator of telomere elo... 196 1.5e-11 1
WARNING: Descriptions of 40 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|F1NN99 [details] [associations]
symbol:DDX11 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IEA] [GO:0030496 "midbody"
evidence=IEA] InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 InterPro:IPR027076
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0003677
GO:GO:0000790 GO:GO:0004003 GO:GO:0030496 GO:GO:0000922
PANTHER:PTHR11472:SF5 TIGRFAMs:TIGR00604 OMA:NLGRCVV
GeneTree:ENSGT00530000063199 GO:GO:0007062 EMBL:AADN02006472
EMBL:AADN02006473 IPI:IPI00575083 IntAct:F1NN99
Ensembl:ENSGALT00000021158 Uniprot:F1NN99
Length = 908
Score = 686 (246.5 bits), Expect = 3.7e-70, Sum P(2) = 3.7e-70
Identities = 131/294 (44%), Positives = 201/294 (68%)
Query: 397 NYMPDIEKTQEKPKLSGLQSFLKGVQENNPNLSKPSEGGIEEAPSQVQEDQVR--NPMLS 454
N P ++ +E KL+GLQ+FL +Q+ + EG ++ P + DQ+R +P++
Sbjct: 516 NPAPVVKTNKENQKLAGLQNFLMTLQQGSYK-----EGPLQSPPVEADSDQLRAASPLMH 570
Query: 455 VVTFLESLVNKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEP 514
+ FL +L N NEDGR+++ + + +S +K++LLNPA HF +V++ R++I+AGGTM+P
Sbjct: 571 IEGFLSALTNANEDGRVILNRQGTIGQSSLKFLLLNPAVHFAKVVKECRAVIIAGGTMQP 630
Query: 515 VSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTL 574
V++F++QL GV +RI FSCGHVIP ENILP+ILCSGP+N++ + T++ R +
Sbjct: 631 VADFREQLLSYAGVDPARIVEFSCGHVIPPENILPIILCSGPSNQQLEFTYQTRDLPQMM 690
Query: 575 KEIAMTITNLCTIVPKGMVCFFPSYDYEAIVYNYMRDNHFIERIARIAKKKVVFREPKKT 634
E + NLC +VP G+VCFFPSYDYE VY + + R+A KKK+ F+EPKK
Sbjct: 691 DETGRILCNLCNVVPGGVVCFFPSYDYEKQVYAHWEKTGLLTRLA--TKKKI-FQEPKKA 747
Query: 635 SEVDKVLSDYGTSVEK-G-------GALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
++V++VL++Y +++ G GAL+LSV+GGK+SEG+NFSDDLGRCV+++
Sbjct: 748 NQVEQVLAEYAKCIKRCGQAGGQMTGALLLSVVGGKMSEGINFSDDLGRCVIMV 801
Score = 508 (183.9 bits), Expect = 1.4e-49, Sum P(2) = 1.4e-49
Identities = 97/215 (45%), Positives = 145/215 (67%)
Query: 194 KT-QEKPKLSGLQSFLKGVQENNPNLSKPPEGGIEEAPSQVQEDQVR--NPMLSVVTFLE 250
KT +E KL+GLQ+FL +Q+ + EG ++ P + DQ+R +P++ + FL
Sbjct: 522 KTNKENQKLAGLQNFLMTLQQGSYK-----EGPLQSPPVEADSDQLRAASPLMHIEGFLS 576
Query: 251 SLVNKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKD 310
+L N NEDGR+++ + + +S +K++LLNPA HF +V++ R++I+AGGTM+PV++F++
Sbjct: 577 ALTNANEDGRVILNRQGTIGQSSLKFLLLNPAVHFAKVVKECRAVIIAGGTMQPVADFRE 636
Query: 311 QLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMT 370
QL GV +RI FSCGHVIP ENILP+ILCSGP+N++ + T++ R + E
Sbjct: 637 QLLSYAGVDPARIVEFSCGHVIPPENILPIILCSGPSNQQLEFTYQTRDLPQMMDETGRI 696
Query: 371 ITNLCTIVPKGMVCFFPSYDYEAIVYNYMPDIEKT 405
+ NLC +VP G+VCFFPSYDYE VY + EKT
Sbjct: 697 LCNLCNVVPGGVVCFFPSYDYEKQVYAHW---EKT 728
Score = 43 (20.2 bits), Expect = 3.7e-70, Sum P(2) = 3.7e-70
Identities = 12/28 (42%), Positives = 13/28 (46%)
Query: 201 LSGLQSFLKGVQENNPNLSKPPEGGIEE 228
LS LQ F K Q+ L P G EE
Sbjct: 63 LSWLQDFEKKKQQEEARLLAPEGSGQEE 90
Score = 41 (19.5 bits), Expect = 6.0e-70, Sum P(2) = 6.0e-70
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 13 DKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQI-YGLK 63
D + +V K DLV L ++ + K+ +E LE I+ H Q+ Y K
Sbjct: 112 DWVTAFVQKKEEQDLVHRLKEEQI--RRKKREERLEKIR---HNVQLKYAAK 158
>ZFIN|ZDB-GENE-041114-191 [details] [associations]
symbol:ddx11 "DEAD/H (Asp-Glu-Ala-Asp/His) box
helicase 11" species:7955 "Danio rerio" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0032508 "DNA duplex
unwinding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0006139 "nucleobase-containing compound
metabolic process" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 InterPro:IPR027076 Pfam:PF06733 Pfam:PF13307
PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
ZFIN:ZDB-GENE-041114-191 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004003 InterPro:IPR014001 SMART:SM00487 eggNOG:COG1199
KO:K11273 PANTHER:PTHR11472:SF5 TIGRFAMs:TIGR00604
HOGENOM:HOG000241266 HOVERGEN:HBG058884 OrthoDB:EOG4B5P4M CTD:1663
EMBL:BC085645 IPI:IPI00501779 RefSeq:NP_001007320.1
UniGene:Dr.37620 ProteinModelPortal:Q5U399 STRING:Q5U399
GeneID:492353 KEGG:dre:492353 InParanoid:Q5U399 NextBio:20864919
ArrayExpress:Q5U399 Uniprot:Q5U399
Length = 890
Score = 642 (231.1 bits), Expect = 1.4e-68, Sum P(2) = 1.4e-68
Identities = 126/286 (44%), Positives = 195/286 (68%)
Query: 404 KTQEKPKLSGLQSFLKGVQENNPNLSKPSEGGIEEAPSQVQEDQVR-NPMLSVVTFLESL 462
K +E + GL FL+ +Q SKP++ + E V++ + +PM+ +FL +L
Sbjct: 505 KNKENRRTEGLWRFLQTLQ------SKPTD--VSEQQMAVEDKPIMASPMMLAESFLFAL 556
Query: 463 VNKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQL 522
N N+DGRI++ + +++S +K++LLN A HF I+Q+ R++I+AGGTM+PV++FK+QL
Sbjct: 557 TNANKDGRIVIQRQACVAQSSLKFLLLNAAVHFAQILQECRAVIIAGGTMQPVADFKEQL 616
Query: 523 FGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTIT 582
S GV E RI FSCGHVIP ENILP++LC+GP+ ++ + TF+ R ++E ++
Sbjct: 617 LFSAGVTEERILEFSCGHVIPPENILPIVLCAGPSGQQLEFTFQTRDSPQMMEETGRVLS 676
Query: 583 NLCTIVPKGMVCFFPSYDYEAIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLS 642
NLC IVP G+VCFFPSY+YE + + ++R+ +KKK+ F+EPKK S+V++VLS
Sbjct: 677 NLCNIVPGGVVCFFPSYEYEKRILGHWESTGILQRLQ--SKKKI-FQEPKKASQVEQVLS 733
Query: 643 DYGTSVEK----GG----ALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
+Y +++ GG AL+ SV+GGK+SEG+NFSDDLGRC+V++
Sbjct: 734 EYSKCIQRCSNIGGGQTGALLFSVVGGKMSEGINFSDDLGRCIVMV 779
Score = 472 (171.2 bits), Expect = 1.4e-45, Sum P(2) = 1.4e-45
Identities = 92/222 (41%), Positives = 144/222 (64%)
Query: 194 KTQEKPKLSGLQSFLKGVQENNPNLSKPPEGGIEEAPSQVQEDQVR-NPMLSVVTFLESL 252
K +E + GL FL+ +Q SKP + + E V++ + +PM+ +FL +L
Sbjct: 505 KNKENRRTEGLWRFLQTLQ------SKPTD--VSEQQMAVEDKPIMASPMMLAESFLFAL 556
Query: 253 VNKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQL 312
N N+DGRI++ + +++S +K++LLN A HF I+Q+ R++I+AGGTM+PV++FK+QL
Sbjct: 557 TNANKDGRIVIQRQACVAQSSLKFLLLNAAVHFAQILQECRAVIIAGGTMQPVADFKEQL 616
Query: 313 FGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTIT 372
S GV E RI FSCGHVIP ENILP++LC+GP+ ++ + TF+ R ++E ++
Sbjct: 617 LFSAGVTEERILEFSCGHVIPPENILPIVLCAGPSGQQLEFTFQTRDSPQMMEETGRVLS 676
Query: 373 NLCTIVPKGMVCFFPSYDYEAIVYNYMPD---IEKTQEKPKL 411
NLC IVP G+VCFFPSY+YE + + +++ Q K K+
Sbjct: 677 NLCNIVPGGVVCFFPSYEYEKRILGHWESTGILQRLQSKKKI 718
Score = 72 (30.4 bits), Expect = 1.4e-68, Sum P(2) = 1.4e-68
Identities = 26/66 (39%), Positives = 36/66 (54%)
Query: 1 MVGEKNLS--PEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQ 58
+V EKN + P D + E+V K D+V N L DE L K K+ +E LE I+ H Q
Sbjct: 80 VVKEKNSNSGPPEPDWVSEFVQKKAERDMV-NKLKDEEL-KRKKREERLEMIR---HNAQ 134
Query: 59 I-YGLK 63
+ Y +K
Sbjct: 135 LRYAMK 140
Score = 42 (19.8 bits), Expect = 2.0e-65, Sum P(2) = 2.0e-65
Identities = 23/80 (28%), Positives = 34/80 (42%)
Query: 193 EKTQEKPKLSGLQSFLKGVQENNPNLSKPPEGGIEEAPSQVQEDQVRNPMLSVVTFL--E 250
++ QE +L Q V+E N N S PPE P V E + +V L E
Sbjct: 63 QRKQEAARLLEGQKDSDVVKEKNSN-SGPPE------PDWVSEFVQKKAERDMVNKLKDE 115
Query: 251 SLVNKNEDGRI-LVTKNPEL 269
L K + R+ ++ N +L
Sbjct: 116 ELKRKKREERLEMIRHNAQL 135
>UNIPROTKB|E2RGR5 [details] [associations]
symbol:DDX11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030496 "midbody" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 InterPro:IPR027076
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0003677
GO:GO:0000790 GO:GO:0004003 GO:GO:0030496 GO:GO:0000922
PANTHER:PTHR11472:SF5 TIGRFAMs:TIGR00604 OMA:NLGRCVV
GeneTree:ENSGT00530000063199 GO:GO:0007062 EMBL:AAEX03015316
Ensembl:ENSCAFT00000024894 Uniprot:E2RGR5
Length = 908
Score = 657 (236.3 bits), Expect = 5.4e-67, Sum P(2) = 5.4e-67
Identities = 123/284 (43%), Positives = 199/284 (70%)
Query: 405 TQEKPKLSGLQSFLKGVQENNPNLSKPSEGGIEEAPSQVQEDQVRNPMLSVVTFLESLVN 464
++E+P L+GLQ FL+ +Q P ++K +E+ ++V +P++ + +FL +L
Sbjct: 523 SREQPNLAGLQHFLQSLQ---PTVTKTPVTPVEDGEARVPRPA--SPLMHIESFLAALTT 577
Query: 465 KNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFG 524
N+DGR+++++ LS+S +K++LLNPA HF +V++ R++++AGGTM+PVS+F++QL
Sbjct: 578 ANQDGRVILSRQGSLSQSSLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFREQLLA 637
Query: 525 SLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNL 584
GV R+ FSCGHVIP +NILPLI+CSGP++++ + T++ R + E + NL
Sbjct: 638 CAGVEAERVVEFSCGHVIPPDNILPLIICSGPSSQQLEFTYQKRELPQMMDETGRILCNL 697
Query: 585 CTIVPKGMVCFFPSYDYEAIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDY 644
CT+VP G+VCFFPSY+Y+ VY + D + +AR+A +K +F+EPK+ ++V++VL +Y
Sbjct: 698 CTVVPGGVVCFFPSYEYQRQVYAHW-DKSGL--LARLAVRKKIFQEPKRANQVEQVLMEY 754
Query: 645 GTSV----EKGG----ALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
+ + GG AL+LSV+GGK+SEG+NFSDDLGRCVV++
Sbjct: 755 SRCIKCCGQAGGTVTGALLLSVVGGKMSEGINFSDDLGRCVVMV 798
Score = 500 (181.1 bits), Expect = 1.2e-46, Sum P(2) = 1.2e-46
Identities = 87/202 (43%), Positives = 142/202 (70%)
Query: 195 TQEKPKLSGLQSFLKGVQENNPNLSKPPEGGIEEAPSQVQEDQVRNPMLSVVTFLESLVN 254
++E+P L+GLQ FL+ +Q P ++K P +E+ ++V +P++ + +FL +L
Sbjct: 523 SREQPNLAGLQHFLQSLQ---PTVTKTPVTPVEDGEARVPRPA--SPLMHIESFLAALTT 577
Query: 255 KNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFG 314
N+DGR+++++ LS+S +K++LLNPA HF +V++ R++++AGGTM+PVS+F++QL
Sbjct: 578 ANQDGRVILSRQGSLSQSSLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFREQLLA 637
Query: 315 SLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNL 374
GV R+ FSCGHVIP +NILPLI+CSGP++++ + T++ R + E + NL
Sbjct: 638 CAGVEAERVVEFSCGHVIPPDNILPLIICSGPSSQQLEFTYQKRELPQMMDETGRILCNL 697
Query: 375 CTIVPKGMVCFFPSYDYEAIVY 396
CT+VP G+VCFFPSY+Y+ VY
Sbjct: 698 CTVVPGGVVCFFPSYEYQRQVY 719
Score = 42 (19.8 bits), Expect = 5.4e-67, Sum P(2) = 5.4e-67
Identities = 17/59 (28%), Positives = 30/59 (50%)
Query: 7 LSPE-VADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQI-YGLK 63
LSP D + ++V K DLV+ L ++ + K+ +E L+ ++ H Q+ Y K
Sbjct: 105 LSPAGEPDWVTQFVQKKEERDLVDRLKEEQ--VRRKKREERLQQMR---HNAQLKYAAK 158
>RGD|1306675 [details] [associations]
symbol:Ddx11 "DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11"
species:10116 "Rattus norvegicus" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000922 "spindle pole" evidence=ISO] [GO:0003677
"DNA binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 InterPro:IPR027076 Pfam:PF06733 Pfam:PF13307
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 RGD:1306675
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0003677 GO:GO:0000790
GO:GO:0004003 GO:GO:0030496 GO:GO:0000922 PANTHER:PTHR11472:SF5
TIGRFAMs:TIGR00604 GeneTree:ENSGT00530000063199 GO:GO:0007062
OrthoDB:EOG4B5P4M IPI:IPI00765140 Ensembl:ENSRNOT00000016536
UCSC:RGD:1306675 Uniprot:D3ZT96
Length = 882
Score = 647 (232.8 bits), Expect = 2.0e-65, Sum P(2) = 2.0e-65
Identities = 126/290 (43%), Positives = 194/290 (66%)
Query: 399 MPDIEKTQEKPKLSGLQSFLKGVQENNPNLSKPSEGGIEEAPSQVQEDQVRNPMLSVVTF 458
+P + ++E L G Q FLK +Q S P E +EE Q + +P++ + F
Sbjct: 492 LPSLSDSEENRGLGGFQQFLKSLQ------SGPPEDSLEEG--QAVALRPASPLMHIEAF 543
Query: 459 LESLVNKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEF 518
LE+L N+DGR++V + + +S +K++LLNPA HF +V++ R++++AGGTM+PVS+F
Sbjct: 544 LEALTTANQDGRVIVNRQGSVGQSSLKFLLLNPAVHFAQVVKECRALVIAGGTMQPVSDF 603
Query: 519 KDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIA 578
++QL GV SR+ FSCGHVIP +NILPLI+CSGP+N++ + T++ R ++E
Sbjct: 604 REQLLACSGVEASRVVEFSCGHVIPPDNILPLIICSGPSNQQLEFTYQRRELPQMMEETG 663
Query: 579 MTITNLCTIVPKGMVCFFPSYDYEAIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVD 638
+ NLC +VP GMVCF PSY+Y V+ + D + +AR++ +K +F+EPK+ S+V+
Sbjct: 664 RILCNLCNVVPGGMVCFLPSYEYLRQVHAHW-DKTGL--LARLSVRKKIFQEPKRASQVE 720
Query: 639 KVLSDYGTSV-----EKG---GALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
+VL+ Y T + +G GAL+LSV+GGK+SEG+NFSDDLGRCVV++
Sbjct: 721 QVLTAYSTCIASCSHSEGHLTGALLLSVVGGKMSEGINFSDDLGRCVVMV 770
Score = 478 (173.3 bits), Expect = 9.8e-43, Sum P(2) = 9.8e-43
Identities = 87/197 (44%), Positives = 131/197 (66%)
Query: 195 TQEKPKLSGLQSFLKGVQENNPNLSKPPEGGIEEAPSQVQEDQVRNPMLSVVTFLESLVN 254
++E L G Q FLK +Q S PPE +EE Q + +P++ + FLE+L
Sbjct: 498 SEENRGLGGFQQFLKSLQ------SGPPEDSLEEG--QAVALRPASPLMHIEAFLEALTT 549
Query: 255 KNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFG 314
N+DGR++V + + +S +K++LLNPA HF +V++ R++++AGGTM+PVS+F++QL
Sbjct: 550 ANQDGRVIVNRQGSVGQSSLKFLLLNPAVHFAQVVKECRALVIAGGTMQPVSDFREQLLA 609
Query: 315 SLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNL 374
GV SR+ FSCGHVIP +NILPLI+CSGP+N++ + T++ R ++E + NL
Sbjct: 610 CSGVEASRVVEFSCGHVIPPDNILPLIICSGPSNQQLEFTYQRRELPQMMEETGRILCNL 669
Query: 375 CTIVPKGMVCFFPSYDY 391
C +VP GMVCF PSY+Y
Sbjct: 670 CNVVPGGMVCFLPSYEY 686
Score = 37 (18.1 bits), Expect = 2.0e-65, Sum P(2) = 2.0e-65
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 13 DKIGEYVLKHGHVDLVENLLADE 35
D + E+V K DLVE L ++
Sbjct: 111 DWVTEFVQKKEERDLVERLREEQ 133
>UNIPROTKB|E1BL06 [details] [associations]
symbol:E1BL06 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030496 "midbody" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0000922 "spindle pole"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 InterPro:IPR027076 Pfam:PF06733 Pfam:PF13307
PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0003677 GO:GO:0000790 GO:GO:0004003 GO:GO:0030496
GO:GO:0000922 InterPro:IPR014001 SMART:SM00487
PANTHER:PTHR11472:SF5 TIGRFAMs:TIGR00604 OMA:NLGRCVV
GeneTree:ENSGT00530000063199 GO:GO:0007062 EMBL:DAAA02014574
EMBL:DAAA02014575 EMBL:DAAA02014576 EMBL:DAAA02014577
IPI:IPI00707607 Ensembl:ENSBTAT00000009329 Uniprot:E1BL06
Length = 913
Score = 621 (223.7 bits), Expect = 4.7e-65, Sum P(3) = 4.7e-65
Identities = 122/282 (43%), Positives = 189/282 (67%)
Query: 405 TQEKPKLSGLQSFLKGVQENNPNLSKPSEGGIEEAPSQVQEDQV---RNPMLSVVTFLES 461
+ E+PKLSG Q FL+ +Q ++ P+ AP +V ED+ +P++ V FLE+
Sbjct: 520 SMEQPKLSGFQDFLQSLQPGA--MAAPA------APVEVGEDRSPRPASPLMHVEGFLEA 571
Query: 462 LVNKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQ 521
L N+DGR+++++ LS+S +K++LLNPA HF +V++ R++++AGGTM+PVS+F++Q
Sbjct: 572 LTTANQDGRVILSRQGSLSQSSLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFREQ 631
Query: 522 LFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTI 581
L GV R+ FSCGHVIP ++ILPLI+CSGP+N+ D T++ R + E +
Sbjct: 632 LLAGAGVEAERVVEFSCGHVIPPDHILPLIICSGPSNQMLDFTYQKRGLPQMMDETGRIL 691
Query: 582 TNLCTIVPKGMVCFFPSYDYEAIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVL 641
NLC +VP G+VCFFPSY+Y+ V + + + AR+ +K +F+EP+K + V++VL
Sbjct: 692 CNLCNVVPGGVVCFFPSYEYQHQVCTHWEKSGLL---ARLTIRKKIFQEPRKANRVEQVL 748
Query: 642 SDYGTSVE-----KG---GALMLSVIGGKLSEGLNFSDDLGR 675
+Y ++ +G GAL+LSV+GGK+SEG+NFSDDLGR
Sbjct: 749 LEYSRCIKHCGQAQGTETGALLLSVVGGKMSEGINFSDDLGR 790
Score = 484 (175.4 bits), Expect = 5.1e-44, Sum P(2) = 5.1e-44
Identities = 90/201 (44%), Positives = 135/201 (67%)
Query: 195 TQEKPKLSGLQSFLKGVQENNPNLSKPPEGGIEEAPSQVQEDQV---RNPMLSVVTFLES 251
+ E+PKLSG Q FL+ +Q P P AP +V ED+ +P++ V FLE+
Sbjct: 520 SMEQPKLSGFQDFLQSLQ---PGAMAAPA-----APVEVGEDRSPRPASPLMHVEGFLEA 571
Query: 252 LVNKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQ 311
L N+DGR+++++ LS+S +K++LLNPA HF +V++ R++++AGGTM+PVS+F++Q
Sbjct: 572 LTTANQDGRVILSRQGSLSQSSLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFREQ 631
Query: 312 LFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTI 371
L GV R+ FSCGHVIP ++ILPLI+CSGP+N+ D T++ R + E +
Sbjct: 632 LLAGAGVEAERVVEFSCGHVIPPDHILPLIICSGPSNQMLDFTYQKRGLPQMMDETGRIL 691
Query: 372 TNLCTIVPKGMVCFFPSYDYE 392
NLC +VP G+VCFFPSY+Y+
Sbjct: 692 CNLCNVVPGGVVCFFPSYEYQ 712
Score = 42 (19.8 bits), Expect = 4.7e-65, Sum P(3) = 4.7e-65
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 13 DKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIK 51
D I ++V K DLV+ L ++ + K+ +E L+ I+
Sbjct: 112 DWITQFVQKKEERDLVDRLKEEQ--VRRKKREERLQQIR 148
Score = 39 (18.8 bits), Expect = 4.7e-65, Sum P(3) = 4.7e-65
Identities = 32/138 (23%), Positives = 52/138 (37%)
Query: 310 DQLFGSLGVPESRIHHFSCGHVIPKEN--ILPL-ILCSGPTNRKFDLTFENRTKG-DTLK 365
+QL +LG ++ IP +LP +L PT + + + + D
Sbjct: 336 EQLV-ALGEEAQACPYYGGRFAIPAAQLVVLPYQMLLHAPTRQAAGIRLQGQVVVIDEAH 394
Query: 366 EIAMTITNLCTIVPKG-MVCFFPSY--DYEAIVYNYMPDIEKTQEKPKLSGLQSF---LK 419
+ TITN+ ++ +G +C S Y + K L L+ F L
Sbjct: 395 NLIDTITNIHSVEVRGSQLCQAHSQLLQYTERYGKRLKAKNLMYIKQLLYLLEKFVAVLG 454
Query: 420 GVQENNPNLSKPSEGGIE 437
G + NPN S+ G E
Sbjct: 455 GNIKQNPNTQSLSQAGTE 472
>MGI|MGI:2443590 [details] [associations]
symbol:Ddx11 "DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0000922 "spindle pole" evidence=ISO] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0030496 "midbody" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster
binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 InterPro:IPR027076
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 MGI:MGI:2443590 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005730 GO:GO:0046872 GO:GO:0003677
GO:GO:0051539 GO:GO:0003723 GO:GO:0000790 GO:GO:0004003
GO:GO:0004386 GO:GO:0030496 GO:GO:0000922 GO:GO:0008094
eggNOG:COG1199 KO:K11273 PANTHER:PTHR11472:SF5 TIGRFAMs:TIGR00604
HOGENOM:HOG000241266 OMA:NLGRCVV GeneTree:ENSGT00530000063199
GO:GO:0007062 HOVERGEN:HBG058884 OrthoDB:EOG4B5P4M CTD:1663
EMBL:BC079656 IPI:IPI00460651 RefSeq:NP_001003919.1
UniGene:Mm.259605 ProteinModelPortal:Q6AXC6 SMR:Q6AXC6
STRING:Q6AXC6 PhosphoSite:Q6AXC6 PRIDE:Q6AXC6
Ensembl:ENSMUST00000163605 GeneID:320209 KEGG:mmu:320209
UCSC:uc008dha.1 InParanoid:Q6AXC6 NextBio:396263 Bgee:Q6AXC6
Genevestigator:Q6AXC6 GermOnline:ENSMUSG00000035842 Uniprot:Q6AXC6
Length = 880
Score = 621 (223.7 bits), Expect = 1.1e-62, Sum P(2) = 1.1e-62
Identities = 120/290 (41%), Positives = 188/290 (64%)
Query: 399 MPDIEKTQEKPKLSGLQSFLKGVQENNPNLSKPSEGGIEEAPSQVQEDQVRNPMLSVVTF 458
+P + +QE L+G Q FLK +Q + P P EG Q + +P++ + F
Sbjct: 490 LPSLSDSQENRGLAGFQQFLKSLQ-SGPTEDSPEEG-------QAVALRPASPLMHIEAF 541
Query: 459 LESLVNKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEF 518
L +L N+DGR++V + + +S +K++LLNPA HF +V++ R++++AGGTM+P+S+F
Sbjct: 542 LAALTTANQDGRVIVNRQGSVGQSSLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPMSDF 601
Query: 519 KDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIA 578
++QL GV R+ FSCGHVIP +NILPLI+CSGP+N++ + T++ R ++E
Sbjct: 602 REQLLACSGVEAGRVVEFSCGHVIPPDNILPLIICSGPSNQQLEFTYQRRELPQMVEETG 661
Query: 579 MTITNLCTIVPKGMVCFFPSYDYEAIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVD 638
+ NLC +VP G+VCF PSY+Y V+ + + R++ + KK +F+EPK+ S+V+
Sbjct: 662 RILCNLCNVVPGGVVCFLPSYEYLRQVHAHWDKTGLLTRLS-VRKK--IFQEPKRASQVE 718
Query: 639 KVLSDYGTSV-----EKG---GALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
+VL Y + +G GAL+LSV+GGK+SEG+NFSDDLGRCVV++
Sbjct: 719 QVLMAYSKCIMSCSHSEGHLTGALLLSVVGGKMSEGINFSDDLGRCVVMV 768
Score = 455 (165.2 bits), Expect = 7.6e-40, Sum P(2) = 7.6e-40
Identities = 82/197 (41%), Positives = 128/197 (64%)
Query: 195 TQEKPKLSGLQSFLKGVQENNPNLSKPPEGGIEEAPSQVQEDQVRNPMLSVVTFLESLVN 254
+QE L+G Q FLK +Q + P P EG Q + +P++ + FL +L
Sbjct: 496 SQENRGLAGFQQFLKSLQ-SGPTEDSPEEG-------QAVALRPASPLMHIEAFLAALTT 547
Query: 255 KNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFG 314
N+DGR++V + + +S +K++LLNPA HF +V++ R++++AGGTM+P+S+F++QL
Sbjct: 548 ANQDGRVIVNRQGSVGQSSLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPMSDFREQLLA 607
Query: 315 SLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNL 374
GV R+ FSCGHVIP +NILPLI+CSGP+N++ + T++ R ++E + NL
Sbjct: 608 CSGVEAGRVVEFSCGHVIPPDNILPLIICSGPSNQQLEFTYQRRELPQMVEETGRILCNL 667
Query: 375 CTIVPKGMVCFFPSYDY 391
C +VP G+VCF PSY+Y
Sbjct: 668 CNVVPGGVVCFLPSYEY 684
Score = 38 (18.4 bits), Expect = 1.1e-62, Sum P(2) = 1.1e-62
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 13 DKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAI 50
D + E+V K DLVE L ++ K +E EA+
Sbjct: 111 DWVTEFVQKKEERDLVERLREEQ-----KHEEEETEAL 143
>UNIPROTKB|Q96FC9 [details] [associations]
symbol:DDX11 "Probable ATP-dependent RNA helicase DDX11"
species:9606 "Homo sapiens" [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051539 "4 iron,
4 sulfur cluster binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0007062 "sister chromatid
cohesion" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0000922
"spindle pole" evidence=IDA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IDA] [GO:0004386 "helicase activity"
evidence=IDA] [GO:0000086 "G2/M transition of mitotic cell cycle"
evidence=TAS] [GO:0000070 "mitotic sister chromatid segregation"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0003678 "DNA helicase activity" evidence=TAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006987
"activation of signaling protein activity involved in unfolded
protein response" evidence=TAS] [GO:0030968 "endoplasmic reticulum
unfolded protein response" evidence=TAS] InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
InterPro:IPR027076 Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 Reactome:REACT_116125 GO:GO:0000086 GO:GO:0019048
GO:GO:0005654 GO:GO:0006987 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0008284 GO:GO:0051539 GO:GO:0003723
GO:GO:0000790 GO:GO:0000070 GO:GO:0004003 GO:GO:0030496
GO:GO:0000922 GO:GO:0000084 GO:GO:0003678 GO:GO:0008094
eggNOG:COG1199 KO:K11273 PANTHER:PTHR11472:SF5 TIGRFAMs:TIGR00604
CleanEx:HS_CHL1 OMA:NLGRCVV GO:GO:0007062 HOVERGEN:HBG058884
OrthoDB:EOG4B5P4M EMBL:X99583 EMBL:U33833 EMBL:U75967 EMBL:U75968
EMBL:BC050069 EMBL:BC050522 IPI:IPI00012188 IPI:IPI00332293
IPI:IPI00657836 IPI:IPI00658184 IPI:IPI00942296 PIR:G02071
RefSeq:NP_001244073.1 RefSeq:NP_001244074.1 RefSeq:NP_004390.3
RefSeq:NP_689651.1 UniGene:Hs.443960 ProteinModelPortal:Q96FC9
SMR:Q96FC9 IntAct:Q96FC9 MINT:MINT-1371028 STRING:Q96FC9
PhosphoSite:Q96FC9 DMDM:74731686 PaxDb:Q96FC9 PRIDE:Q96FC9
DNASU:1663 Ensembl:ENST00000228264 Ensembl:ENST00000251758
Ensembl:ENST00000350437 Ensembl:ENST00000407793
Ensembl:ENST00000435753 Ensembl:ENST00000542838
Ensembl:ENST00000545668 GeneID:1663 KEGG:hsa:1663 UCSC:uc001rjr.1
UCSC:uc001rjs.1 UCSC:uc001rjt.1 UCSC:uc001rju.1 CTD:1663
GeneCards:GC12P031226 HGNC:HGNC:2736 MIM:601150 MIM:613398
neXtProt:NX_Q96FC9 Orphanet:280558 PharmGKB:PA27201
InParanoid:Q96FC9 PhylomeDB:Q96FC9 GenomeRNAi:1663 NextBio:6842
ArrayExpress:Q96FC9 Bgee:Q96FC9 CleanEx:HS_DDX11
Genevestigator:Q96FC9 GermOnline:ENSG00000013573 Uniprot:Q96FC9
Length = 970
Score = 619 (223.0 bits), Expect = 1.5e-62, Sum P(2) = 1.5e-62
Identities = 121/284 (42%), Positives = 189/284 (66%)
Query: 405 TQEKPKLSGLQSFLKGVQENNPNLSKPSEGGIEEAPSQVQEDQVRNPMLSVVTFLESLVN 464
++E+PKL+G Q FL+ +Q P ++ +E SQ + +P++ + FL +L
Sbjct: 521 SREQPKLAGFQQFLQSLQ---PRTTEALAAPADE--SQASTLRPASPLMHIQGFLAALTT 575
Query: 465 KNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFG 524
N+DGR+++++ LS+S +K++LLNPA HF +V++ R++++AGGTM+PVS+F+ QL
Sbjct: 576 ANQDGRVILSRQGSLSQSTLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLA 635
Query: 525 SLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNL 584
GV R+ FSCGHVIP +NILPL++CSG +N+ + TF+ R + E+ + NL
Sbjct: 636 CAGVEAERVVEFSCGHVIPPDNILPLVICSGISNQPLEFTFQKRELPQMMDEVGRILCNL 695
Query: 585 CTIVPKGMVCFFPSYDYEAIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDY 644
C +VP G+VCFFPSY+Y V+ + + R+A A+KK+ F+EPK +V++VL Y
Sbjct: 696 CGVVPGGVVCFFPSYEYLRQVHAHWEKGGLLGRLA--ARKKI-FQEPKSAHQVEQVLLAY 752
Query: 645 GTSV-----EKG---GALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
+ E+G GAL+LSV+GGK+SEG+NFSD+LGRCVV++
Sbjct: 753 SRCIQACGQERGQVTGALLLSVVGGKMSEGINFSDNLGRCVVMV 796
Score = 466 (169.1 bits), Expect = 3.9e-42, Sum P(2) = 3.9e-42
Identities = 86/218 (39%), Positives = 142/218 (65%)
Query: 175 QKNLVEPRMQLCHELWGGE-KTQEKPKLSGLQSFLKGVQENNPNLSKPPEGGIEEAPSQV 233
+K+++ ++ E +G ++E+PKL+G Q FL+ +Q P ++ +E SQ
Sbjct: 500 EKSMISRKLFGFTERYGAVFSSREQPKLAGFQQFLQSLQ---PRTTEALAAPADE--SQA 554
Query: 234 QEDQVRNPMLSVVTFLESLVNKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDAR 293
+ +P++ + FL +L N+DGR+++++ LS+S +K++LLNPA HF +V++ R
Sbjct: 555 STLRPASPLMHIQGFLAALTTANQDGRVILSRQGSLSQSTLKFLLLNPAVHFAQVVKECR 614
Query: 294 SIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDL 353
++++AGGTM+PVS+F+ QL GV R+ FSCGHVIP +NILPL++CSG +N+ +
Sbjct: 615 AVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPDNILPLVICSGISNQPLEF 674
Query: 354 TFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDY 391
TF+ R + E+ + NLC +VP G+VCFFPSY+Y
Sbjct: 675 TFQKRELPQMMDEVGRILCNLCGVVPGGVVCFFPSYEY 712
Score = 49 (22.3 bits), Expect = 1.5e-62, Sum P(2) = 1.5e-62
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 15 IGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQI-YGLK 63
+ ++V K DLV+ L A++ A+ KQ +E L+ ++ H Q+ Y K
Sbjct: 114 VTQFVQKKEERDLVDRLKAEQ--ARRKQREERLQQLQ---HRVQLKYAAK 158
>UNIPROTKB|Q92771 [details] [associations]
symbol:DDX12P "Putative ATP-dependent RNA helicase DDX12"
species:9606 "Homo sapiens" [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 InterPro:IPR027076
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0003723 GO:GO:0007049
GO:GO:0004003 PANTHER:PTHR11472:SF5 TIGRFAMs:TIGR00604
HOGENOM:HOG000241266 HOVERGEN:HBG058884 EMBL:AC092821 EMBL:AC141557
EMBL:U33834 IPI:IPI00023299 UniGene:Hs.447869 UniGene:Hs.504688
ProteinModelPortal:Q92771 SMR:Q92771 STRING:Q92771
PhosphoSite:Q92771 DMDM:182705254 PRIDE:Q92771
GeneCards:GC12M009720 HGNC:HGNC:2737 MIM:601151 neXtProt:NX_Q92771
InParanoid:Q92771 ArrayExpress:Q92771 CleanEx:HS_DDX12
Genevestigator:Q92771 Uniprot:Q92771
Length = 950
Score = 614 (221.2 bits), Expect = 6.5e-62, Sum P(2) = 6.5e-62
Identities = 121/284 (42%), Positives = 187/284 (65%)
Query: 405 TQEKPKLSGLQSFLKGVQENNPNLSKPSEGGIEEAPSQVQEDQVRNPMLSVVTFLESLVN 464
++E+PKL+G Q FL+ +Q P ++ +E SQ Q +P++ + FL +L
Sbjct: 540 SREQPKLAGFQQFLQSLQ---PRTTEALAAPADE--SQASVPQPASPLMHIEGFLAALTT 594
Query: 465 KNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFG 524
N+DGR+++++ LS+S +K++LLNPA HF +V++ R++++AGGTM+PVS F+ QL
Sbjct: 595 ANQDGRVILSRQGSLSQSTLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSNFRQQLLA 654
Query: 525 SLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNL 584
GV R+ FSCGHVIP +NILPL++CSG +N+ + TF+ R + E+ + NL
Sbjct: 655 CAGVEAERVVEFSCGHVIPPDNILPLVICSGVSNQPLEFTFQKRDLPQMMDEVGRILCNL 714
Query: 585 CTIVPKGMVCFFPSYDYEAIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDY 644
C +V G+VCFFPSY+Y V+ + + R+A A+KK+ F+EPK +V++VL Y
Sbjct: 715 CGVVSGGVVCFFPSYEYLRQVHAHWEKGGLLGRLA--ARKKI-FQEPKSAHQVEQVLLAY 771
Query: 645 GTSV-----EKG---GALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
+ E+G GAL+LSV+GGK+SEG+NFSD+LGRCVV++
Sbjct: 772 SRCLQACGQERGPVTGALLLSVVGGKMSEGINFSDNLGRCVVMV 815
Score = 463 (168.0 bits), Expect = 1.3e-41, Sum P(2) = 1.3e-41
Identities = 86/218 (39%), Positives = 140/218 (64%)
Query: 175 QKNLVEPRMQLCHELWGGE-KTQEKPKLSGLQSFLKGVQENNPNLSKPPEGGIEEAPSQV 233
+K+++ ++ E +G ++E+PKL+G Q FL+ +Q P ++ +E SQ
Sbjct: 519 EKSMISRKLFGFTERYGAVFSSREQPKLAGFQQFLQSLQ---PRTTEALAAPADE--SQA 573
Query: 234 QEDQVRNPMLSVVTFLESLVNKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDAR 293
Q +P++ + FL +L N+DGR+++++ LS+S +K++LLNPA HF +V++ R
Sbjct: 574 SVPQPASPLMHIEGFLAALTTANQDGRVILSRQGSLSQSTLKFLLLNPAVHFAQVVKECR 633
Query: 294 SIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDL 353
++++AGGTM+PVS F+ QL GV R+ FSCGHVIP +NILPL++CSG +N+ +
Sbjct: 634 AVVIAGGTMQPVSNFRQQLLACAGVEAERVVEFSCGHVIPPDNILPLVICSGVSNQPLEF 693
Query: 354 TFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDY 391
TF+ R + E+ + NLC +V G+VCFFPSY+Y
Sbjct: 694 TFQKRDLPQMMDEVGRILCNLCGVVSGGVVCFFPSYEY 731
Score = 47 (21.6 bits), Expect = 6.5e-62, Sum P(2) = 6.5e-62
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 15 IGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQI-YGLK 63
+ ++V K DLV L A++ A+ KQ +E L+ ++ H Q+ Y K
Sbjct: 133 VTQFVQKKEERDLVNRLKAEQ--ARRKQREERLQQLQ---HRVQLKYAAK 177
>UNIPROTKB|F1SK84 [details] [associations]
symbol:DDX11 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030496 "midbody" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0000922 "spindle pole"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 InterPro:IPR027076
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0003677
GO:GO:0000790 GO:GO:0004003 GO:GO:0030496 GO:GO:0000922
PANTHER:PTHR11472:SF5 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 GO:GO:0007062 EMBL:CU861969
Ensembl:ENSSSCT00000000809 OMA:HQISKRD Uniprot:F1SK84
Length = 682
Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
Identities = 121/286 (42%), Positives = 195/286 (68%)
Query: 406 QEKPKLSGLQSFLKGVQENNPNLSKPSEGGIEEAPSQVQE---DQVRNPMLSVVTFLESL 462
+E+P+L+G Q FL+ +Q P G+ EAP + +E + +P++ + FL +L
Sbjct: 295 REQPRLAGFQHFLQSLQ--------P---GVTEAPVEEEEAGAPRPASPLMHIEGFLAAL 343
Query: 463 VNKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQL 522
N+DGR+++++ LS+S +K++LLNPA HF +V++ R++++AGGTM+PVS+F++QL
Sbjct: 344 TTANQDGRVILSRQGSLSQSSLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFREQL 403
Query: 523 FGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTIT 582
GV R+ FSCGHVIP +NILPL++CSGP N++ + T++ R + E +
Sbjct: 404 LACAGVEAERVVEFSCGHVIPPDNILPLVICSGPANQQLEFTYQKRELPQMMDETGRILC 463
Query: 583 NLCTIVPKGMVCFFPSYDYEAIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLS 642
NLC +VP G+VCFFPSY+Y+ V+ + D + +AR+A +K +F+EPK+ ++V++VL
Sbjct: 464 NLCNVVPGGVVCFFPSYEYQRQVHAHW-DRSGL--LARLAVRKKIFQEPKRANQVEQVLK 520
Query: 643 DYGTSVE-----KG---GALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
+Y ++ +G GAL+LSV+GGK+SEG+NFSD LGRCVV++
Sbjct: 521 EYSRCIKHCGQAEGMVTGALLLSVVGGKMSEGINFSDSLGRCVVMV 566
Score = 476 (172.6 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 86/224 (38%), Positives = 147/224 (65%)
Query: 175 QKNLVEPRMQLCHELWGG--EKTQEKPKLSGLQSFLKGVQENNPNLSKPPEGGIEEAPSQ 232
+K+++ ++ E +G +E+P+L+G Q FL+ +Q P +++ P +EE +
Sbjct: 272 EKSMISRKLLGFTERYGAVLASPREQPRLAGFQHFLQSLQ---PGVTEAP---VEE--EE 323
Query: 233 VQEDQVRNPMLSVVTFLESLVNKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDA 292
+ +P++ + FL +L N+DGR+++++ LS+S +K++LLNPA HF +V++
Sbjct: 324 AGAPRPASPLMHIEGFLAALTTANQDGRVILSRQGSLSQSSLKFLLLNPAVHFAQVVKEC 383
Query: 293 RSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFD 352
R++++AGGTM+PVS+F++QL GV R+ FSCGHVIP +NILPL++CSGP N++ +
Sbjct: 384 RAVVIAGGTMQPVSDFREQLLACAGVEAERVVEFSCGHVIPPDNILPLVICSGPANQQLE 443
Query: 353 LTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYEAIVY 396
T++ R + E + NLC +VP G+VCFFPSY+Y+ V+
Sbjct: 444 FTYQKRELPQMMDETGRILCNLCNVVPGGVVCFFPSYEYQRQVH 487
>UNIPROTKB|A8MPP1 [details] [associations]
symbol:DDX11L8 "Putative ATP-dependent RNA helicase
DDX11-like protein 8" species:9606 "Homo sapiens" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 InterPro:IPR027076
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005730
GO:GO:0003677 GO:GO:0003723 GO:GO:0004003 eggNOG:COG1199
PANTHER:PTHR11472:SF5 TIGRFAMs:TIGR00604 EMBL:AC009533
IPI:IPI00872853 ProteinModelPortal:A8MPP1 SMR:A8MPP1 STRING:A8MPP1
PhosphoSite:A8MPP1 PaxDb:A8MPP1 PRIDE:A8MPP1 GeneCards:GC12M000095
HGNC:HGNC:37101 neXtProt:NX_A8MPP1 HOVERGEN:HBG058884
InParanoid:A8MPP1 OrthoDB:EOG4B5P4M Genevestigator:A8MPP1
Uniprot:A8MPP1
Length = 907
Score = 588 (212.0 bits), Expect = 5.0e-59, Sum P(2) = 5.0e-59
Identities = 117/284 (41%), Positives = 184/284 (64%)
Query: 405 TQEKPKLSGLQSFLKGVQENNPNLSKPSEGGIEEAPSQVQEDQVRNPMLSVVTFLESLVN 464
++E+PKL+G Q FL+ +Q P ++ +E SQ Q +P++ + FL +L
Sbjct: 523 SREQPKLAGFQQFLQSLQ---PRTTEALAAPADE--SQASVPQPASPLMHIEGFLAALTT 577
Query: 465 KNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFG 524
N+DGR+++++ LS+S +K++LLNPA HF +V++ R++++AGGTM+PVS+F+ QL
Sbjct: 578 ANQDGRVILSRQGSLSESTLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLA 637
Query: 525 SLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNL 584
GV R+ FSCGHVIP +NI PL++CSG +N+ + TF+ R + E+ + NL
Sbjct: 638 CAGVEAERVVEFSCGHVIPPDNI-PLVICSGISNQPLEFTFQKRDLPQMMDEVGRILCNL 696
Query: 585 CTIVPKGMVCFFPSYDYEAIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDY 644
C +V G+VCFF SY+Y V+ + + R+A A+KK+ F+EPK +V++VL Y
Sbjct: 697 CGVVSGGVVCFFSSYEYLRQVHAHWEKGGLLGRLA--ARKKI-FQEPKSAHQVEQVLLAY 753
Query: 645 GTSVEKGG--------ALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
++ G AL+LSV+GGK+SEG+NFSD+LGRCVV++
Sbjct: 754 SRCIQACGQERGQVTEALLLSVVGGKMSEGINFSDNLGRCVVMV 797
Score = 443 (161.0 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 84/218 (38%), Positives = 139/218 (63%)
Query: 175 QKNLVEPRMQLCHELWGGE-KTQEKPKLSGLQSFLKGVQENNPNLSKPPEGGIEEAPSQV 233
+K+++ ++ E +G ++E+PKL+G Q FL+ +Q P ++ +E SQ
Sbjct: 502 EKSMISRKLFGFTERYGAVFSSREQPKLAGFQQFLQSLQ---PRTTEALAAPADE--SQA 556
Query: 234 QEDQVRNPMLSVVTFLESLVNKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDAR 293
Q +P++ + FL +L N+DGR+++++ LS+S +K++LLNPA HF +V++ R
Sbjct: 557 SVPQPASPLMHIEGFLAALTTANQDGRVILSRQGSLSESTLKFLLLNPAVHFAQVVKECR 616
Query: 294 SIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDL 353
++++AGGTM+PVS+F+ QL GV R+ FSCGHVIP +NI PL++CSG +N+ +
Sbjct: 617 AVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPDNI-PLVICSGISNQPLEF 675
Query: 354 TFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDY 391
TF+ R + E+ + NLC +V G+VCFF SY+Y
Sbjct: 676 TFQKRDLPQMMDEVGRILCNLCGVVSGGVVCFFSSYEY 713
Score = 45 (20.9 bits), Expect = 5.0e-59, Sum P(2) = 5.0e-59
Identities = 15/50 (30%), Positives = 27/50 (54%)
Query: 15 IGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQI-YGLK 63
+ ++V K DLV+ L ++ A+ KQ +E L+ ++ H Q+ Y K
Sbjct: 114 VTQFVQKKEERDLVDRLKVEQ--ARRKQREERLQQLQ---HRVQLKYAAK 158
>UNIPROTKB|B3KWE1 [details] [associations]
symbol:HARS "Histidyl-tRNA synthetase, isoform CRA_a"
species:9606 "Homo sapiens" [GO:0004821 "histidine-tRNA ligase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006427 "histidyl-tRNA
aminoacylation" evidence=IEA] InterPro:IPR004516 InterPro:IPR006195
InterPro:IPR015807 PIRSF:PIRSF001549 PROSITE:PS50862
InterPro:IPR004154 GO:GO:0005524 GO:GO:0005737 EMBL:CH471062
SUPFAM:SSF52954 Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476
EMBL:AC116353 GO:GO:0004821 GO:GO:0006427 TIGRFAMs:TIGR00442
HOGENOM:HOG000018075 HOVERGEN:HBG002731 OrthoDB:EOG4D26PM
UniGene:Hs.528050 HGNC:HGNC:4816 ChiTaRS:HARS EMBL:AK124831
IPI:IPI00976939 SMR:B3KWE1 STRING:B3KWE1 Ensembl:ENST00000504366
Uniprot:B3KWE1
Length = 440
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 119/215 (55%), Positives = 140/215 (65%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MVGEK L+PEVAD+IG+YV +HG V LVE LL D L+++KQA EGL +KLLF Y ++
Sbjct: 184 MVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKLSQNKQALEGLGDLKLLFEYLTLF 243
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVLKD---QA------VGSVAGGGRYDNLVGMFDP 111
G+ D I FDLSLARGLDYYTGVIYEAVL QA VGSVA GGRYD LVGMFDP
Sbjct: 244 GIDDKISFDLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAGGRYDGLVGMFDP 303
Query: 112 KNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYV 171
K + PCV GL IGVER+FSI+E R K++TT TQV V
Sbjct: 304 KGRKVPCV---------GL----------SIGVERIFSIVEQRLEALEEKIRTTETQVLV 344
Query: 172 ASAQKNLVEPRMQLCHELW-GGEKTQ----EKPKL 201
ASAQK L+E R++L ELW G K + + PKL
Sbjct: 345 ASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKL 379
>UNIPROTKB|B4DDD8 [details] [associations]
symbol:HARS "Histidine--tRNA ligase, cytoplasmic"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006418 "tRNA aminoacylation for protein translation"
evidence=IEA] [GO:0004812 "aminoacyl-tRNA ligase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000738 InterPro:IPR004516 Pfam:PF00458
PIRSF:PIRSF001549 PROSITE:PS00762 PROSITE:PS51185 SMART:SM00991
InterPro:IPR004154 GO:GO:0005524 GO:GO:0005737 GO:GO:0006418
GO:GO:0004812 SUPFAM:SSF52954 Gene3D:3.40.50.800 Pfam:PF03129
PANTHER:PTHR11476 EMBL:AC116353 Gene3D:1.10.287.10
InterPro:IPR009068 SUPFAM:SSF47060 HOGENOM:HOG000018075
HOVERGEN:HBG002731 UniGene:Hs.528050 HGNC:HGNC:4816 ChiTaRS:HARS
EMBL:AK293154 IPI:IPI00910697 SMR:B4DDD8 STRING:B4DDD8
Ensembl:ENST00000415192 UCSC:uc011czo.2 Uniprot:B4DDD8
Length = 435
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 119/215 (55%), Positives = 140/215 (65%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MVGEK L+PEVAD+IG+YV +HG V LVE LL D L+++KQA EGL +KLLF Y ++
Sbjct: 179 MVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKLSQNKQALEGLGDLKLLFEYLTLF 238
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVLKD---QA------VGSVAGGGRYDNLVGMFDP 111
G+ D I FDLSLARGLDYYTGVIYEAVL QA VGSVA GGRYD LVGMFDP
Sbjct: 239 GIDDKISFDLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAGGRYDGLVGMFDP 298
Query: 112 KNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYV 171
K + PCV GL IGVER+FSI+E R K++TT TQV V
Sbjct: 299 KGRKVPCV---------GL----------SIGVERIFSIVEQRLEALEEKIRTTETQVLV 339
Query: 172 ASAQKNLVEPRMQLCHELW-GGEKTQ----EKPKL 201
ASAQK L+E R++L ELW G K + + PKL
Sbjct: 340 ASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKL 374
>UNIPROTKB|B4E1C5 [details] [associations]
symbol:HARS "Histidine--tRNA ligase, cytoplasmic"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006418 "tRNA aminoacylation for protein translation"
evidence=IEA] [GO:0004812 "aminoacyl-tRNA ligase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000738 InterPro:IPR004516 Pfam:PF00458
PIRSF:PIRSF001549 PROSITE:PS00762 PROSITE:PS51185 SMART:SM00991
InterPro:IPR004154 GO:GO:0005524 GO:GO:0005737 GO:GO:0006418
GO:GO:0004812 SUPFAM:SSF52954 Gene3D:3.40.50.800 Pfam:PF03129
PANTHER:PTHR11476 EMBL:AC116353 Gene3D:1.10.287.10
InterPro:IPR009068 SUPFAM:SSF47060 HOGENOM:HOG000018075
HOVERGEN:HBG002731 UniGene:Hs.528050 HGNC:HGNC:4816 ChiTaRS:HARS
EMBL:AK303778 IPI:IPI00911023 SMR:B4E1C5 STRING:B4E1C5
Ensembl:ENST00000431330 UCSC:uc011czp.2 Uniprot:B4E1C5
Length = 395
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 119/215 (55%), Positives = 140/215 (65%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MVGEK L+PEVAD+IG+YV +HG V LVE LL D L+++KQA EGL +KLLF Y ++
Sbjct: 139 MVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKLSQNKQALEGLGDLKLLFEYLTLF 198
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVLKD---QA------VGSVAGGGRYDNLVGMFDP 111
G+ D I FDLSLARGLDYYTGVIYEAVL QA VGSVA GGRYD LVGMFDP
Sbjct: 199 GIDDKISFDLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAGGRYDGLVGMFDP 258
Query: 112 KNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYV 171
K + PCV GL IGVER+FSI+E R K++TT TQV V
Sbjct: 259 KGRKVPCV---------GL----------SIGVERIFSIVEQRLEALEEKIRTTETQVLV 299
Query: 172 ASAQKNLVEPRMQLCHELW-GGEKTQ----EKPKL 201
ASAQK L+E R++L ELW G K + + PKL
Sbjct: 300 ASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKL 334
>UNIPROTKB|C9JWK3 [details] [associations]
symbol:HARS "Histidine--tRNA ligase, cytoplasmic"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR004516 PIRSF:PIRSF001549 InterPro:IPR004154
GO:GO:0005737 SUPFAM:SSF52954 Gene3D:3.40.50.800 Pfam:PF03129
PANTHER:PTHR11476 EMBL:AC116353 HOGENOM:HOG000018075 HGNC:HGNC:4816
ChiTaRS:HARS IPI:IPI00940549 ProteinModelPortal:C9JWK3 SMR:C9JWK3
STRING:C9JWK3 Ensembl:ENST00000448240 ArrayExpress:C9JWK3
Bgee:C9JWK3 Uniprot:C9JWK3
Length = 314
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 119/215 (55%), Positives = 140/215 (65%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MVGEK L+PEVAD+IG+YV +HG V LVE LL D L+++KQA EGL +KLLF Y ++
Sbjct: 58 MVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKLSQNKQALEGLGDLKLLFEYLTLF 117
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVLKD---QA------VGSVAGGGRYDNLVGMFDP 111
G+ D I FDLSLARGLDYYTGVIYEAVL QA VGSVA GGRYD LVGMFDP
Sbjct: 118 GIDDKISFDLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAGGRYDGLVGMFDP 177
Query: 112 KNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYV 171
K + PCV GL IGVER+FSI+E R K++TT TQV V
Sbjct: 178 KGRKVPCV---------GL----------SIGVERIFSIVEQRLEALEEKIRTTETQVLV 218
Query: 172 ASAQKNLVEPRMQLCHELW-GGEKTQ----EKPKL 201
ASAQK L+E R++L ELW G K + + PKL
Sbjct: 219 ASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKL 253
>UNIPROTKB|D6REN6 [details] [associations]
symbol:HARS "Histidine--tRNA ligase, cytoplasmic"
species:9606 "Homo sapiens" [GO:0004812 "aminoacyl-tRNA ligase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006418 "tRNA aminoacylation for protein translation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000738 InterPro:IPR004516 Pfam:PF00458
PIRSF:PIRSF001549 PROSITE:PS00762 PROSITE:PS51185 SMART:SM00991
InterPro:IPR004154 GO:GO:0005524 GO:GO:0005737 GO:GO:0006418
GO:GO:0004812 SUPFAM:SSF52954 Gene3D:3.40.50.800 Pfam:PF03129
PANTHER:PTHR11476 KO:K01892 EMBL:AC116353 Gene3D:1.10.287.10
InterPro:IPR009068 SUPFAM:SSF47060 CTD:3035 HOGENOM:HOG000018075
UniGene:Hs.528050 GeneID:3035 KEGG:hsa:3035 HGNC:HGNC:4816
ChiTaRS:HARS IPI:IPI00967106 RefSeq:NP_001244970.1
ProteinModelPortal:D6REN6 SMR:D6REN6 Ensembl:ENST00000457527
UCSC:uc003lgw.3 ArrayExpress:D6REN6 Bgee:D6REN6 Uniprot:D6REN6
Length = 489
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 119/215 (55%), Positives = 140/215 (65%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MVGEK L+PEVAD+IG+YV +HG V LVE LL D L+++KQA EGL +KLLF Y ++
Sbjct: 233 MVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKLSQNKQALEGLGDLKLLFEYLTLF 292
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVLKD---QA------VGSVAGGGRYDNLVGMFDP 111
G+ D I FDLSLARGLDYYTGVIYEAVL QA VGSVA GGRYD LVGMFDP
Sbjct: 293 GIDDKISFDLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAGGRYDGLVGMFDP 352
Query: 112 KNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYV 171
K + PCV GL IGVER+FSI+E R K++TT TQV V
Sbjct: 353 KGRKVPCV---------GL----------SIGVERIFSIVEQRLEALEEKIRTTETQVLV 393
Query: 172 ASAQKNLVEPRMQLCHELW-GGEKTQ----EKPKL 201
ASAQK L+E R++L ELW G K + + PKL
Sbjct: 394 ASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKL 428
>UNIPROTKB|J3KNE5 [details] [associations]
symbol:HARS "Histidine--tRNA ligase, cytoplasmic"
species:9606 "Homo sapiens" [GO:0004812 "aminoacyl-tRNA ligase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006418 "tRNA
aminoacylation for protein translation" evidence=IEA]
InterPro:IPR000738 InterPro:IPR004516 Pfam:PF00458
PIRSF:PIRSF001549 PROSITE:PS00762 PROSITE:PS51185 SMART:SM00991
InterPro:IPR004154 GO:GO:0005524 GO:GO:0005737 GO:GO:0006418
GO:GO:0004812 SUPFAM:SSF52954 Gene3D:3.40.50.800 Pfam:PF03129
PANTHER:PTHR11476 KO:K01892 EMBL:AC116353 Gene3D:1.10.287.10
InterPro:IPR009068 SUPFAM:SSF47060 CTD:3035 UniGene:Hs.528050
GeneID:3035 KEGG:hsa:3035 HGNC:HGNC:4816 ChiTaRS:HARS
RefSeq:NP_001244971.1 ProteinModelPortal:J3KNE5
Ensembl:ENST00000307633 Uniprot:J3KNE5
Length = 449
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 119/215 (55%), Positives = 140/215 (65%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MVGEK L+PEVAD+IG+YV +HG V LVE LL D L+++KQA EGL +KLLF Y ++
Sbjct: 193 MVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKLSQNKQALEGLGDLKLLFEYLTLF 252
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVLKD---QA------VGSVAGGGRYDNLVGMFDP 111
G+ D I FDLSLARGLDYYTGVIYEAVL QA VGSVA GGRYD LVGMFDP
Sbjct: 253 GIDDKISFDLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAGGRYDGLVGMFDP 312
Query: 112 KNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYV 171
K + PCV GL IGVER+FSI+E R K++TT TQV V
Sbjct: 313 KGRKVPCV---------GL----------SIGVERIFSIVEQRLEALEEKIRTTETQVLV 353
Query: 172 ASAQKNLVEPRMQLCHELW-GGEKTQ----EKPKL 201
ASAQK L+E R++L ELW G K + + PKL
Sbjct: 354 ASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKL 388
>UNIPROTKB|P12081 [details] [associations]
symbol:HARS "Histidine--tRNA ligase, cytoplasmic"
species:9606 "Homo sapiens" [GO:0006427 "histidyl-tRNA
aminoacylation" evidence=IEA] [GO:0004821 "histidine-tRNA ligase
activity" evidence=NAS] [GO:0006412 "translation" evidence=NAS]
[GO:0005737 "cytoplasm" evidence=IDA;NAS] [GO:0005524 "ATP binding"
evidence=NAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006418 "tRNA
aminoacylation for protein translation" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] Reactome:REACT_71
InterPro:IPR000738 InterPro:IPR002314 InterPro:IPR004516
InterPro:IPR006195 InterPro:IPR015807 Pfam:PF00458 Pfam:PF00587
PIRSF:PIRSF001549 PROSITE:PS00762 PROSITE:PS50862 PROSITE:PS51185
SMART:SM00991 InterPro:IPR004154 GO:GO:0005829 GO:GO:0005524
GO:GO:0005737 GO:GO:0006418 GO:GO:0004812 SUPFAM:SSF52954
Orphanet:231183 DrugBank:DB00117 Gene3D:3.40.50.800 Pfam:PF03129
PANTHER:PTHR11476 eggNOG:COG0124 KO:K01892 EMBL:AC116353
Gene3D:1.10.287.10 InterPro:IPR009068 SUPFAM:SSF47060 GO:GO:0004821
GO:GO:0006427 TIGRFAMs:TIGR00442 CTD:3035 HOGENOM:HOG000018075
HOVERGEN:HBG002731 OMA:RGERAQK EMBL:Z11518 EMBL:X05345
EMBL:AK302295 EMBL:BC011807 EMBL:BC080514 EMBL:M96646 EMBL:U18936
IPI:IPI00021808 PIR:I37559 RefSeq:NP_001244969.1 RefSeq:NP_002100.2
UniGene:Hs.528050 PDB:1X59 PDB:4G84 PDB:4G85 PDBsum:1X59
PDBsum:4G84 PDBsum:4G85 ProteinModelPortal:P12081 SMR:P12081
DIP:DIP-37596N IntAct:P12081 STRING:P12081 PhosphoSite:P12081
DMDM:135123 PaxDb:P12081 PeptideAtlas:P12081 PRIDE:P12081
Ensembl:ENST00000438307 Ensembl:ENST00000504156 GeneID:3035
KEGG:hsa:3035 UCSC:uc003lgu.3 GeneCards:GC05M140034 HGNC:HGNC:4816
HPA:HPA036539 MIM:142810 MIM:614504 neXtProt:NX_P12081
PharmGKB:PA29191 InParanoid:P12081 PhylomeDB:P12081 BRENDA:6.1.1.21
BindingDB:P12081 ChEMBL:CHEMBL4002 ChiTaRS:HARS
EvolutionaryTrace:P12081 GenomeRNAi:3035 NextBio:12014
ArrayExpress:P12081 Bgee:P12081 CleanEx:HS_HARS
Genevestigator:P12081 GermOnline:ENSG00000170445 Uniprot:P12081
Length = 509
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 119/215 (55%), Positives = 140/215 (65%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MVGEK L+PEVAD+IG+YV +HG V LVE LL D L+++KQA EGL +KLLF Y ++
Sbjct: 253 MVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKLSQNKQALEGLGDLKLLFEYLTLF 312
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVLKD---QA------VGSVAGGGRYDNLVGMFDP 111
G+ D I FDLSLARGLDYYTGVIYEAVL QA VGSVA GGRYD LVGMFDP
Sbjct: 313 GIDDKISFDLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAGGRYDGLVGMFDP 372
Query: 112 KNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYV 171
K + PCV GL IGVER+FSI+E R K++TT TQV V
Sbjct: 373 KGRKVPCV---------GL----------SIGVERIFSIVEQRLEALEEKIRTTETQVLV 413
Query: 172 ASAQKNLVEPRMQLCHELW-GGEKTQ----EKPKL 201
ASAQK L+E R++L ELW G K + + PKL
Sbjct: 414 ASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKL 448
>UNIPROTKB|F1RGD9 [details] [associations]
symbol:HARS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006427 "histidyl-tRNA aminoacylation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004821 "histidine-tRNA ligase activity"
evidence=IEA] InterPro:IPR000738 InterPro:IPR004516
InterPro:IPR006195 InterPro:IPR015807 Pfam:PF00458
PIRSF:PIRSF001549 PROSITE:PS00762 PROSITE:PS50862 PROSITE:PS51185
SMART:SM00991 InterPro:IPR004154 HAMAP:MF_00127 GO:GO:0005524
GO:GO:0005737 SUPFAM:SSF52954 Gene3D:3.40.50.800 Pfam:PF03129
PANTHER:PTHR11476 KO:K01892 Gene3D:1.10.287.10 InterPro:IPR009068
SUPFAM:SSF47060 GO:GO:0004821 GO:GO:0006427 TIGRFAMs:TIGR00442
GeneTree:ENSGT00390000005922 OMA:RGERAQK EMBL:CU459055
RefSeq:XP_003124081.1 Ensembl:ENSSSCT00000015705 GeneID:100518652
KEGG:ssc:100518652 Uniprot:F1RGD9
Length = 509
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 120/215 (55%), Positives = 140/215 (65%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MVGEK L+PEVAD+IG+YV +HG V LVE LL D L+++KQA EGL +KLLF Y ++
Sbjct: 253 MVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKLSQNKQALEGLGDLKLLFEYLTLF 312
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVLKD---QA------VGSVAGGGRYDNLVGMFDP 111
G+ D I FDLSLARGLDYYTGVIYEAVL QA VGSVA GGRYD LVGMFDP
Sbjct: 313 GVADKISFDLSLARGLDYYTGVIYEAVLLQPPAQAGEEPLGVGSVAAGGRYDGLVGMFDP 372
Query: 112 KNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYV 171
K + PCV GL IGVER+FSI+E R KV+TT TQV V
Sbjct: 373 KGRKVPCV---------GL----------SIGVERIFSIVEQRLEALEEKVRTTETQVLV 413
Query: 172 ASAQKNLVEPRMQLCHELW-GGEKTQ----EKPKL 201
ASAQK L+E R++L ELW G K + + PKL
Sbjct: 414 ASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKL 448
>MGI|MGI:108087 [details] [associations]
symbol:Hars "histidyl-tRNA synthetase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004812 "aminoacyl-tRNA ligase activity" evidence=IEA]
[GO:0004821 "histidine-tRNA ligase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0006418
"tRNA aminoacylation for protein translation" evidence=IEA]
[GO:0006427 "histidyl-tRNA aminoacylation" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] InterPro:IPR000738
InterPro:IPR004516 InterPro:IPR006195 InterPro:IPR015807
Pfam:PF00458 PIRSF:PIRSF001549 PROSITE:PS00762 PROSITE:PS50862
PROSITE:PS51185 SMART:SM00991 InterPro:IPR004154 MGI:MGI:108087
GO:GO:0005524 GO:GO:0005737 SUPFAM:SSF52954 Gene3D:3.40.50.800
Pfam:PF03129 PANTHER:PTHR11476 eggNOG:COG0124 KO:K01892
Gene3D:1.10.287.10 InterPro:IPR009068 SUPFAM:SSF47060 GO:GO:0004821
GO:GO:0006427 TIGRFAMs:TIGR00442 CTD:3035
GeneTree:ENSGT00390000005922 HOGENOM:HOG000018075
HOVERGEN:HBG002731 OMA:RGERAQK OrthoDB:EOG4D26PM BRENDA:6.1.1.21
ChiTaRS:HARS EMBL:U39473 EMBL:AK146922 EMBL:AK166826 EMBL:AK166892
IPI:IPI00116991 PIR:JC5223 RefSeq:NP_032240.3 UniGene:Mm.10528
ProteinModelPortal:Q61035 SMR:Q61035 STRING:Q61035
PhosphoSite:Q61035 PaxDb:Q61035 PRIDE:Q61035
Ensembl:ENSMUST00000001416 GeneID:15115 KEGG:mmu:15115
InParanoid:Q3TKU3 NextBio:287526 Bgee:Q61035 CleanEx:MM_HARS
Genevestigator:Q61035 GermOnline:ENSMUSG00000001380 Uniprot:Q61035
Length = 509
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 119/215 (55%), Positives = 140/215 (65%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MVGEK L+PEVAD+IG+YV +HG V LVE LL D L+++KQA EGL +KLLF Y ++
Sbjct: 253 MVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKLSQNKQAVEGLGDLKLLFEYLILF 312
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVLKD---QA------VGSVAGGGRYDNLVGMFDP 111
G+ D I FDLSLARGLDYYTGVIYEAVL QA VGS+A GGRYD LVGMFDP
Sbjct: 313 GIDDKISFDLSLARGLDYYTGVIYEAVLLQMPTQAGEEPLGVGSIAAGGRYDGLVGMFDP 372
Query: 112 KNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYV 171
K + PCV GL IGVER+FSI+E R KV+TT TQV V
Sbjct: 373 KGRKVPCV---------GL----------SIGVERIFSIVEQRLEASEEKVRTTETQVLV 413
Query: 172 ASAQKNLVEPRMQLCHELW-GGEKTQ----EKPKL 201
ASAQK L+E R++L ELW G K + + PKL
Sbjct: 414 ASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKL 448
>TAIR|locus:2017894 [details] [associations]
symbol:AT1G79890 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0006261
"DNA-dependent DNA replication" evidence=RCA] [GO:0006310 "DNA
recombination" evidence=RCA] [GO:0007059 "chromosome segregation"
evidence=RCA] [GO:0007126 "meiosis" evidence=RCA] [GO:0007129
"synapsis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] InterPro:IPR002464
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
InterPro:IPR027076 Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690
PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004003 InterPro:IPR014001 SMART:SM00487 EMBL:AC011717
UniGene:At.18069 eggNOG:COG1199 KO:K11273 PANTHER:PTHR11472:SF5
TIGRFAMs:TIGR00604 HOGENOM:HOG000241266 OMA:NLGRCVV IPI:IPI00530666
PIR:A96830 RefSeq:NP_178107.1 UniGene:At.66890
ProteinModelPortal:Q9CA92 SMR:Q9CA92 STRING:Q9CA92 PaxDb:Q9CA92
PRIDE:Q9CA92 EnsemblPlants:AT1G79890.1 GeneID:844328
KEGG:ath:AT1G79890 TAIR:At1g79890 InParanoid:Q9CA92
PhylomeDB:Q9CA92 ProtClustDB:CLSN2681868 Genevestigator:Q9CA92
Uniprot:Q9CA92
Length = 882
Score = 495 (179.3 bits), Expect = 8.4e-47, Sum P(3) = 8.4e-47
Identities = 104/279 (37%), Positives = 179/279 (64%)
Query: 414 LQSFLKGVQENNPNLSKPSEGGIEEAPSQVQEDQVRNPMLSVVT-------FLESLVNKN 466
L L ++E+N + K S G E + +Q+D V + +S +T L +L N N
Sbjct: 460 LVKLLAYIKESNI-IHKVSGYG-ERVAAMLQKDPVAHEEMSKLTSFRAFSDMLVALTNNN 517
Query: 467 EDGRILVTK-NPELSKSH---IKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQL 522
DGRI++++ + S H IKY++L A F+++V +A ++I+AGGT++P+ E +++L
Sbjct: 518 GDGRIIISRTSSSTSGQHGGYIKYVMLTGAKLFSEVVDEAHAVILAGGTLQPIEETRERL 577
Query: 523 FGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTIT 582
F L P +++ FSC H++P E+I+P+ + GP+ + FD + +R+ ++E+ + ++
Sbjct: 578 FPWL--PSNQLQFFSCSHIVPPESIMPIAVSHGPSGQSFDFSHSSRSSIGMIQELGLLMS 635
Query: 583 NLCTIVPKGMVCFFPSYDYEAIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLS 642
NL +VP+G++ FF S++YE V+ ++ + RI KKK VFREP+K +EV+ VL
Sbjct: 636 NLVAVVPEGIIVFFSSFEYETQVHTAWSNSGILRRIV---KKKRVFREPRKNTEVEAVLR 692
Query: 643 DYGTSVE-KGGALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
DY ++E + GA+ML+V+GGK+SEG+NFSD + RCVV++
Sbjct: 693 DYKEAIESERGAIMLAVVGGKVSEGINFSDSMCRCVVMV 731
Score = 315 (115.9 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 65/204 (31%), Positives = 123/204 (60%)
Query: 204 LQSFLKGVQENNPNLSKPPEGGIEEAPSQVQEDQVRNPMLSVVT-------FLESLVNKN 256
L L ++E+N + G E + +Q+D V + +S +T L +L N N
Sbjct: 460 LVKLLAYIKESN--IIHKVSGYGERVAAMLQKDPVAHEEMSKLTSFRAFSDMLVALTNNN 517
Query: 257 EDGRILVTK-NPELSKSH---IKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQL 312
DGRI++++ + S H IKY++L A F+++V +A ++I+AGGT++P+ E +++L
Sbjct: 518 GDGRIIISRTSSSTSGQHGGYIKYVMLTGAKLFSEVVDEAHAVILAGGTLQPIEETRERL 577
Query: 313 FGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTIT 372
F L P +++ FSC H++P E+I+P+ + GP+ + FD + +R+ ++E+ + ++
Sbjct: 578 FPWL--PSNQLQFFSCSHIVPPESIMPIAVSHGPSGQSFDFSHSSRSSIGMIQELGLLMS 635
Query: 373 NLCTIVPKGMVCFFPSYDYEAIVY 396
NL +VP+G++ FF S++YE V+
Sbjct: 636 NLVAVVPEGIIVFFSSFEYETQVH 659
Score = 44 (20.5 bits), Expect = 8.4e-47, Sum P(3) = 8.4e-47
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 192 GEKTQEKPKLSGLQSFLKGVQENNP---NLSKPPEGGIEEAPSQVQEDQ 237
GEK E L + E++P N + P G + + S+ +ED+
Sbjct: 124 GEKADELNDQEFLLDEYESQDESSPGGGNSKRKPARGFDSSSSEDEEDE 172
Score = 38 (18.4 bits), Expect = 8.4e-47, Sum P(3) = 8.4e-47
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 408 KPKLS--GLQSFLKGVQENNPNLSKP 431
KP S L S G+ NP+ SKP
Sbjct: 413 KPLASDRNLSSVNVGLDTENPSKSKP 438
Score = 38 (18.4 bits), Expect = 2.1e-45, Sum P(2) = 2.1e-45
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 198 KPKLS--GLQSFLKGVQENNPNLSKP 221
KP S L S G+ NP+ SKP
Sbjct: 413 KPLASDRNLSSVNVGLDTENPSKSKP 438
>UNIPROTKB|Q2KI84 [details] [associations]
symbol:HARS "Histidine--tRNA ligase, cytoplasmic"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0004821 "histidine-tRNA ligase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006427 "histidyl-tRNA
aminoacylation" evidence=IEA] InterPro:IPR000738 InterPro:IPR004516
InterPro:IPR006195 InterPro:IPR015807 Pfam:PF00458
PIRSF:PIRSF001549 PROSITE:PS00762 PROSITE:PS50862 PROSITE:PS51185
SMART:SM00991 InterPro:IPR004154 GO:GO:0005524 GO:GO:0005737
SUPFAM:SSF52954 Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476
eggNOG:COG0124 KO:K01892 Gene3D:1.10.287.10 InterPro:IPR009068
SUPFAM:SSF47060 GO:GO:0004821 GO:GO:0006427 TIGRFAMs:TIGR00442
EMBL:BC112731 IPI:IPI00686511 RefSeq:NP_001039531.1
UniGene:Bt.49179 ProteinModelPortal:Q2KI84 SMR:Q2KI84 STRING:Q2KI84
PRIDE:Q2KI84 Ensembl:ENSBTAT00000025094 GeneID:510937
KEGG:bta:510937 CTD:3035 GeneTree:ENSGT00390000005922
HOGENOM:HOG000018075 HOVERGEN:HBG002731 InParanoid:Q2KI84
OMA:RGERAQK OrthoDB:EOG4D26PM NextBio:20869692 ArrayExpress:Q2KI84
Uniprot:Q2KI84
Length = 509
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 118/215 (54%), Positives = 139/215 (64%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MVGEK L+PEVAD+IG+YV +HG V LVE LL D L+++KQA EGL +KLLF Y ++
Sbjct: 253 MVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKLSQNKQALEGLGDLKLLFEYLTLF 312
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVL---------KDQAVGSVAGGGRYDNLVGMFDP 111
G+ D I FDLSLARGLDYYTGVIYEAVL + VGSVA GGRYD LVGMFDP
Sbjct: 313 GIADKISFDLSLARGLDYYTGVIYEAVLLQPPARAGEEPLGVGSVAAGGRYDGLVGMFDP 372
Query: 112 KNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYV 171
K + PCV GL IGVER+FSI+E R KV+TT TQV V
Sbjct: 373 KGRKVPCV---------GL----------SIGVERIFSIVEQRLEALEEKVRTTETQVLV 413
Query: 172 ASAQKNLVEPRMQLCHELW-GGEKTQ----EKPKL 201
ASAQK L+E R++L ELW G K + + PKL
Sbjct: 414 ASAQKKLLEERLKLISELWDAGIKAELLYKKNPKL 448
>RGD|1310695 [details] [associations]
symbol:Hars "histidyl-tRNA synthetase" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=ISO]
InterPro:IPR000738 InterPro:IPR004516 InterPro:IPR006195
InterPro:IPR015807 Pfam:PF00458 PIRSF:PIRSF001549 PROSITE:PS00762
PROSITE:PS50862 PROSITE:PS51185 SMART:SM00991 InterPro:IPR004154
HAMAP:MF_00127 RGD:1310695 GO:GO:0005524 GO:GO:0005737
SUPFAM:SSF52954 Gene3D:3.40.50.800 Pfam:PF03129 EMBL:CH473974
PANTHER:PTHR11476 eggNOG:COG0124 KO:K01892 Gene3D:1.10.287.10
InterPro:IPR009068 SUPFAM:SSF47060 GO:GO:0004821 GO:GO:0006427
TIGRFAMs:TIGR00442 CTD:3035 HOGENOM:HOG000018075 HOVERGEN:HBG002731
OrthoDB:EOG4D26PM IPI:IPI00561142 EMBL:BC097969
RefSeq:NP_001020585.1 UniGene:Rn.35537 SMR:Q4QQV4 STRING:Q4QQV4
GeneID:307492 KEGG:rno:307492 NextBio:657484 Genevestigator:Q4QQV4
Uniprot:Q4QQV4
Length = 508
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 118/215 (54%), Positives = 140/215 (65%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MVGEK L+PEVAD+IG+YV +HG V LVE LL D L+++KQA EGL +KLLF Y ++
Sbjct: 253 MVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKLSQNKQAVEGLGDLKLLFEYLTLF 312
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVLKD---QA------VGSVAGGGRYDNLVGMFDP 111
G+ D I FDLSLARGLDYYTGVIYEAVL QA VGS+A GGRYD LVGMFDP
Sbjct: 313 GIDDKISFDLSLARGLDYYTGVIYEAVLLQMPTQAGEEPLGVGSIAAGGRYDGLVGMFDP 372
Query: 112 KNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYV 171
K + PCV GL IGVER+FSI+E + KV+TT TQV V
Sbjct: 373 KGRKVPCV---------GL----------SIGVERIFSIVEQKLEASEEKVRTTETQVLV 413
Query: 172 ASAQKNLVEPRMQLCHELW-GGEKTQ----EKPKL 201
ASAQK L+E R++L ELW G K + + PKL
Sbjct: 414 ASAQKKLLEERLKLISELWDAGIKAELLYKKNPKL 448
>UNIPROTKB|F1LPB1 [details] [associations]
symbol:Hars "Protein Hars" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR004516 PIRSF:PIRSF001549 InterPro:IPR004154 RGD:1310695
GO:GO:0005737 SUPFAM:SSF52954 Gene3D:3.40.50.800 Pfam:PF03129
PANTHER:PTHR11476 GeneTree:ENSGT00390000005922 IPI:IPI00561142
PRIDE:F1LPB1 Ensembl:ENSRNOT00000039291 ArrayExpress:F1LPB1
Uniprot:F1LPB1
Length = 408
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 118/215 (54%), Positives = 140/215 (65%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MVGEK L+PEVAD+IG+YV +HG V LVE LL D L+++KQA EGL +KLLF Y ++
Sbjct: 153 MVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKLSQNKQAVEGLGDLKLLFEYLTLF 212
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVLKD---QA------VGSVAGGGRYDNLVGMFDP 111
G+ D I FDLSLARGLDYYTGVIYEAVL QA VGS+A GGRYD LVGMFDP
Sbjct: 213 GIDDKISFDLSLARGLDYYTGVIYEAVLLQMPTQAGEEPLGVGSIAAGGRYDGLVGMFDP 272
Query: 112 KNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYV 171
K + PCV GL IGVER+FSI+E + KV+TT TQV V
Sbjct: 273 KGRKVPCV---------GL----------SIGVERIFSIVEQKLEASEEKVRTTETQVLV 313
Query: 172 ASAQKNLVEPRMQLCHELW-GGEKTQ----EKPKL 201
ASAQK L+E R++L ELW G K + + PKL
Sbjct: 314 ASAQKKLLEERLKLISELWDAGIKAELLYKKNPKL 348
>UNIPROTKB|E2QZ69 [details] [associations]
symbol:HARS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006427 "histidyl-tRNA aminoacylation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004821 "histidine-tRNA ligase
activity" evidence=IEA] InterPro:IPR000738 InterPro:IPR004516
InterPro:IPR006195 InterPro:IPR015807 Pfam:PF00458
PIRSF:PIRSF001549 PROSITE:PS00762 PROSITE:PS50862 PROSITE:PS51185
SMART:SM00991 InterPro:IPR004154 HAMAP:MF_00127 GO:GO:0005524
GO:GO:0005737 SUPFAM:SSF52954 Gene3D:3.40.50.800 Pfam:PF03129
PANTHER:PTHR11476 KO:K01892 Gene3D:1.10.287.10 InterPro:IPR009068
SUPFAM:SSF47060 GO:GO:0004821 GO:GO:0006427 TIGRFAMs:TIGR00442
CTD:3035 GeneTree:ENSGT00390000005922 OMA:RGERAQK EMBL:AAEX03001393
RefSeq:XP_535213.2 Ensembl:ENSCAFT00000009515 GeneID:478034
KEGG:cfa:478034 NextBio:20853418 Uniprot:E2QZ69
Length = 509
Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 119/215 (55%), Positives = 139/215 (64%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MVGEK L+PEVAD IG+YV +HG + LVE LL D L+++KQA EGL +KLLF Y ++
Sbjct: 253 MVGEKGLAPEVADHIGDYVQQHGGISLVEQLLQDPELSQNKQALEGLGDLKLLFEYLTLF 312
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVLKD---QA------VGSVAGGGRYDNLVGMFDP 111
G+ D I FDLSLARGLDYYTGVIYEAVL QA VGSVA GGRYD LVGMFDP
Sbjct: 313 GIADKISFDLSLARGLDYYTGVIYEAVLLQTPVQAGEEPLGVGSVAAGGRYDGLVGMFDP 372
Query: 112 KNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYV 171
K + PCV GL IGVER+FSI+E R KV+TT TQV V
Sbjct: 373 KGRKVPCV---------GL----------SIGVERIFSIVEQRLEATEEKVRTTETQVLV 413
Query: 172 ASAQKNLVEPRMQLCHELWG-GEKTQ----EKPKL 201
ASAQK L+E R++L ELW G K + + PKL
Sbjct: 414 ASAQKKLLEERLKLVSELWNAGIKAELLYKKNPKL 448
>UNIPROTKB|F1ND13 [details] [associations]
symbol:HARS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004821 "histidine-tRNA ligase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006427 "histidyl-tRNA aminoacylation"
evidence=IEA] InterPro:IPR000738 InterPro:IPR004516
InterPro:IPR006195 InterPro:IPR015807 Pfam:PF00458
PIRSF:PIRSF001549 PROSITE:PS50862 PROSITE:PS51185 SMART:SM00991
InterPro:IPR004154 GO:GO:0005524 GO:GO:0005737 SUPFAM:SSF52954
Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476
Gene3D:1.10.287.10 InterPro:IPR009068 SUPFAM:SSF47060 GO:GO:0004821
GO:GO:0006427 TIGRFAMs:TIGR00442 GeneTree:ENSGT00390000005922
EMBL:AADN02063754 EMBL:AADN02063755 IPI:IPI00594137
Ensembl:ENSGALT00000001152 OMA:ALDIARC ArrayExpress:F1ND13
Uniprot:F1ND13
Length = 504
Score = 481 (174.4 bits), Expect = 8.8e-46, P = 8.8e-46
Identities = 113/215 (52%), Positives = 137/215 (63%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MVGEK LSPE AD+IGEYV HG +DL+E LL D L+++K KEGL +KLLF Y ++
Sbjct: 251 MVGEKGLSPEAADRIGEYVQLHGGMDLIEQLLQDPKLSQNKLVKEGLGDMKLLFEYLTLF 310
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVLKDQ---------AVGSVAGGGRYDNLVGMFDP 111
G+ I FDLSLARGLDYYTGVIYEAVL Q +VGSVAGGGRYD LVGMFDP
Sbjct: 311 GITGKISFDLSLARGLDYYTGVIYEAVLLQQENDHGEESVSVGSVAGGGRYDGLVGMFDP 370
Query: 112 KNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYV 171
K + PCV + G+ +ER+FSI+E R K++TT TQV V
Sbjct: 371 KGRKVPCVGISI-----GI-------------IERIFSILEQRVEASEEKIRTTETQVLV 412
Query: 172 ASAQKNLVEPRMQLCHELW-GGEKTQ----EKPKL 201
ASAQK L+E R++L ELW G K + + PKL
Sbjct: 413 ASAQKKLLEERLKLISELWDAGIKAEVLYKKNPKL 447
>UNIPROTKB|E2QZ43 [details] [associations]
symbol:HARS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006427 "histidyl-tRNA aminoacylation" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004821 "histidine-tRNA
ligase activity" evidence=IEA] InterPro:IPR004516
InterPro:IPR006195 InterPro:IPR015807 PIRSF:PIRSF001549
PROSITE:PS50862 InterPro:IPR004154 GO:GO:0005739 GO:GO:0005524
SUPFAM:SSF52954 Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476
OMA:NKIKRAC GO:GO:0004821 GO:GO:0006427 TIGRFAMs:TIGR00442
ProteinModelPortal:E2QZ43 Ensembl:ENSCAFT00000009521
NextBio:20853419 Uniprot:E2QZ43
Length = 505
Score = 472 (171.2 bits), Expect = 1.1e-44, P = 1.1e-44
Identities = 110/214 (51%), Positives = 138/214 (64%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MV +K L+PEVAD+IG+YV +HG V LVE + D L+++KQA EGL ++LLF Y ++
Sbjct: 254 MVAKKGLAPEVADRIGDYVQRHGGVSLVEEMFQDSRLSQNKQALEGLGDLRLLFEYLTLF 313
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVLKD---QA-----VGSVAGGGRYDNLVGMFDPK 112
G+ + I FDLSLARGLDYYTGVIYEAVL QA VGSVA GGRYD LVG+FDPK
Sbjct: 314 GIAEKISFDLSLARGLDYYTGVIYEAVLLQTPAQAEECLNVGSVAAGGRYDGLVGVFDPK 373
Query: 113 NKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYVA 172
T PCV GL IGVER+F+I+E R G+K++TT TQV+VA
Sbjct: 374 GHTVPCV---------GL----------SIGVERIFAILEERMKTAGLKIRTTETQVFVA 414
Query: 173 SAQKNLVEPRMQLCHELW-GGEKTQ----EKPKL 201
+ QKN + R++L ELW G K + PKL
Sbjct: 415 TPQKNFLHERLKLISELWDAGIKAELLYKNNPKL 448
>UNIPROTKB|F6XKV4 [details] [associations]
symbol:HARS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006427 "histidyl-tRNA aminoacylation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004821 "histidine-tRNA ligase
activity" evidence=IEA] InterPro:IPR004516 InterPro:IPR006195
InterPro:IPR015807 PIRSF:PIRSF001549 PROSITE:PS50862
InterPro:IPR004154 GO:GO:0005524 GO:GO:0005737 SUPFAM:SSF52954
Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476 KO:K01892
OMA:NKIKRAC GO:GO:0004821 GO:GO:0006427 TIGRFAMs:TIGR00442
GeneTree:ENSGT00390000005922 CTD:23438 EMBL:AAEX03001393
Ensembl:ENSCAFT00000009521 RefSeq:XP_535214.3 GeneID:478035
KEGG:cfa:478035 Uniprot:F6XKV4
Length = 506
Score = 472 (171.2 bits), Expect = 1.1e-44, P = 1.1e-44
Identities = 110/214 (51%), Positives = 138/214 (64%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MV +K L+PEVAD+IG+YV +HG V LVE + D L+++KQA EGL ++LLF Y ++
Sbjct: 255 MVAKKGLAPEVADRIGDYVQRHGGVSLVEEMFQDSRLSQNKQALEGLGDLRLLFEYLTLF 314
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVLKD---QA-----VGSVAGGGRYDNLVGMFDPK 112
G+ + I FDLSLARGLDYYTGVIYEAVL QA VGSVA GGRYD LVG+FDPK
Sbjct: 315 GIAEKISFDLSLARGLDYYTGVIYEAVLLQTPAQAEECLNVGSVAAGGRYDGLVGVFDPK 374
Query: 113 NKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYVA 172
T PCV GL IGVER+F+I+E R G+K++TT TQV+VA
Sbjct: 375 GHTVPCV---------GL----------SIGVERIFAILEERMKTAGLKIRTTETQVFVA 415
Query: 173 SAQKNLVEPRMQLCHELW-GGEKTQ----EKPKL 201
+ QKN + R++L ELW G K + PKL
Sbjct: 416 TPQKNFLHERLKLISELWDAGIKAELLYKNNPKL 449
>UNIPROTKB|F1RGD8 [details] [associations]
symbol:HARS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006427
"histidyl-tRNA aminoacylation" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004821 "histidine-tRNA ligase activity"
evidence=IEA] InterPro:IPR004516 InterPro:IPR006195
InterPro:IPR015807 PIRSF:PIRSF001549 PROSITE:PS50862
InterPro:IPR004154 GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF52954
Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476 KO:K01892
OMA:NKIKRAC GO:GO:0004821 GO:GO:0006427 TIGRFAMs:TIGR00442
GeneTree:ENSGT00390000005922 EMBL:CU459055 RefSeq:XP_003124096.1
Ensembl:ENSSSCT00000015706 GeneID:100521256 KEGG:ssc:100521256
Uniprot:F1RGD8
Length = 506
Score = 471 (170.9 bits), Expect = 1.4e-44, P = 1.4e-44
Identities = 113/215 (52%), Positives = 138/215 (64%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MV ++ L+PEVAD+IG+YV HG V LVE++L D L+++KQA EGL +KLLF Y ++
Sbjct: 254 MVAKRGLAPEVADRIGDYVQCHGGVSLVEDMLQDPELSRNKQALEGLGDLKLLFDYLTLF 313
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVLKD---QA------VGSVAGGGRYDNLVGMFDP 111
G+ + I FDLSLARGLDYYTGVIYEAVL QA VGSVA GGRYD LVGMFDP
Sbjct: 314 GIAEKISFDLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLNVGSVAAGGRYDGLVGMFDP 373
Query: 112 KNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYV 171
K T PCV GL IGVER+FSI+E R G K++TT TQV+V
Sbjct: 374 KGHTVPCV---------GL----------SIGVERIFSIVEQRMKTFGEKIRTTETQVFV 414
Query: 172 ASAQKNLVEPRMQLCHELW-GGEKTQ----EKPKL 201
A+ QKN + R++L ELW G K + PKL
Sbjct: 415 ATPQKNFLRERLKLIAELWDAGIKAELMYKNNPKL 449
>UNIPROTKB|F1NTT1 [details] [associations]
symbol:HARS2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004812 "aminoacyl-tRNA ligase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006418 "tRNA aminoacylation for protein
translation" evidence=IEA] InterPro:IPR004516 InterPro:IPR006195
PIRSF:PIRSF001549 PROSITE:PS50862 InterPro:IPR004154 GO:GO:0005524
GO:GO:0005737 GO:GO:0006418 GO:GO:0004812 SUPFAM:SSF52954
Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476
GeneTree:ENSGT00390000005922 EMBL:AADN02063755 EMBL:AADN02063756
IPI:IPI00820590 Ensembl:ENSGALT00000041281 OMA:ICGIPES
Uniprot:F1NTT1
Length = 490
Score = 469 (170.2 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 112/215 (52%), Positives = 136/215 (63%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MVGEK LSPE AD+IGEYV HG +DL+E LL D L+++K AKEGL +KLLF Y ++
Sbjct: 224 MVGEKGLSPEAADRIGEYVQLHGGMDLIEQLLQDPKLSQNKLAKEGLGDMKLLFEYLTLF 283
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVLKDQ---------AVGSVAGGGRYDNLVGMFDP 111
G+ I FDLSLARGLDYYTGVI EAVL Q +VGSVAGGGRYD LV FDP
Sbjct: 284 GITGKISFDLSLARGLDYYTGVIIEAVLLQQENDHGEESVSVGSVAGGGRYDGLVATFDP 343
Query: 112 KNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYV 171
K + PCV G+ IG+ER+FSI+E R G KV+TT TQV V
Sbjct: 344 KGRKVPCV---------GI----------SIGIERIFSILEQRMKASGEKVRTTETQVMV 384
Query: 172 ASAQKNLVEPRMQLCHELW-GGEKTQ----EKPKL 201
A+ QK+L+ R++L ELW G K + + PKL
Sbjct: 385 ATPQKHLLSARLKLISELWDAGIKAEMMYRKDPKL 419
>FB|FBgn0026876 [details] [associations]
symbol:CG11403 species:7227 "Drosophila melanogaster"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0006289 "nucleotide-excision repair" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0032508 "DNA duplex
unwinding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 InterPro:IPR027076
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00491
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
EMBL:AE014298 GO:GO:0006200 GO:GO:0004003 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 eggNOG:COG1199 KO:K11273
PANTHER:PTHR11472:SF5 TIGRFAMs:TIGR00604 OMA:NLGRCVV
GeneTree:ENSGT00530000063199 EMBL:AL121806 EMBL:AY058540
RefSeq:NP_569898.1 UniGene:Dm.4169 SMR:Q9XZS9 STRING:Q9XZS9
EnsemblMetazoa:FBtr0070245 GeneID:31072 KEGG:dme:Dmel_CG11403
UCSC:CG11403-RA FlyBase:FBgn0026876 InParanoid:Q9XZS9
OrthoDB:EOG4Q83CB GenomeRNAi:31072 NextBio:771801 Uniprot:Q9XZS9
Length = 861
Score = 487 (176.5 bits), Expect = 3.2e-44, P = 3.2e-44
Identities = 112/292 (38%), Positives = 178/292 (60%)
Query: 393 AIVYNYMPDIEKTQEKPKLSGLQSFLKGVQENNPNLSKPSEGGIEEAPSQVQEDQVR-NP 451
+++ + +K +EK K S + V++ N K E ++ P++ ++V +P
Sbjct: 483 SLILQRLASEQKLKEKTK-----SVKRRVEDINKE-DKAEELQEQQKPTKKPVEEVAPSP 536
Query: 452 MLSVVTFLESLVNKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGT 511
+ ++ FLE+L + EDGRILV +P +KYILL+PA F DIV +AR+I++AGGT
Sbjct: 537 IRPLLAFLETLTSNAEDGRILV--DPV--GGTLKYILLDPAEQFADIVAEARAIVIAGGT 592
Query: 512 MEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKG 571
M+P E K+QLF G + + F HV+ + ILP ++ +GP+ F +R
Sbjct: 593 MQPTKELKEQLF--TGCHDRLVERFY-NHVVANDAILPFVISNGPSGAPLSFKFAHRGSA 649
Query: 572 DTLKEIAMTITNLCTIVPKGMVCFFPSYDYEAIVYNYMRDNHFIERIARIAKKKVVFREP 631
+ L+E++M + NLC +VP G+VCF PSY+Y VY Y+ + +E I+ +K VFRE
Sbjct: 650 EMLRELSMILRNLCQVVPGGVVCFLPSYEYLDKVYKYLEQSGTLETISG---RKSVFREV 706
Query: 632 KKTSEVDKVLSDYGTSVEKG---GALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
++E ++L +Y ++++ GAL+LSV+GGKLSEGLNF+DDLGR V+V+
Sbjct: 707 SGSAE--QLLDNYALAIKRPASYGALLLSVVGGKLSEGLNFADDLGRAVLVV 756
Score = 356 (130.4 bits), Expect = 3.3e-29, P = 3.3e-29
Identities = 86/241 (35%), Positives = 136/241 (56%)
Query: 182 RMQLCHELWGGEKTQEKPKLSGLQSFLKGVQENNPNLSKPPEGGIEEAPSQVQEDQVR-N 240
R + L +K +EK K S + V++ N K E ++ P++ ++V +
Sbjct: 482 RSLILQRLASEQKLKEKTK-----SVKRRVEDINKE-DKAEELQEQQKPTKKPVEEVAPS 535
Query: 241 PMLSVVTFLESLVNKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGG 300
P+ ++ FLE+L + EDGRILV +P +KYILL+PA F DIV +AR+I++AGG
Sbjct: 536 PIRPLLAFLETLTSNAEDGRILV--DPV--GGTLKYILLDPAEQFADIVAEARAIVIAGG 591
Query: 301 TMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTK 360
TM+P E K+QLF G + + F HV+ + ILP ++ +GP+ F +R
Sbjct: 592 TMQPTKELKEQLF--TGCHDRLVERFY-NHVVANDAILPFVISNGPSGAPLSFKFAHRGS 648
Query: 361 GDTLKEIAMTITNLCTIVPKGMVCFFPSYDYEAIVYNYMPDIEKTQEKPKLSGLQSFLKG 420
+ L+E++M + NLC +VP G+VCF PSY+Y VY Y+ E++ +SG +S +
Sbjct: 649 AEMLRELSMILRNLCQVVPGGVVCFLPSYEYLDKVYKYL---EQSGTLETISGRKSVFRE 705
Query: 421 V 421
V
Sbjct: 706 V 706
>UNIPROTKB|B4DDY8 [details] [associations]
symbol:HARSL "Histidyl-tRNA synthetase-like, isoform CRA_a"
species:9606 "Homo sapiens" [GO:0004821 "histidine-tRNA ligase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006427 "histidyl-tRNA
aminoacylation" evidence=IEA] InterPro:IPR004516 InterPro:IPR006195
InterPro:IPR015807 PIRSF:PIRSF001549 PROSITE:PS50862
InterPro:IPR004154 GO:GO:0005524 GO:GO:0005737 EMBL:CH471062
SUPFAM:SSF52954 Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476
EMBL:AC116353 GO:GO:0004821 GO:GO:0006427 TIGRFAMs:TIGR00442
HOGENOM:HOG000018075 HOVERGEN:HBG002731 UniGene:Hs.432560
HGNC:HGNC:4817 EMBL:AK293390 IPI:IPI00966091 SMR:B4DDY8
STRING:B4DDY8 Ensembl:ENST00000508522 UCSC:uc011czr.2
Uniprot:B4DDY8
Length = 481
Score = 465 (168.7 bits), Expect = 6.9e-44, P = 6.9e-44
Identities = 113/215 (52%), Positives = 136/215 (63%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MV +K L+PEVAD+IG+YV HG V LVE + D L+++KQA EGL +KLLF Y ++
Sbjct: 229 MVVKKGLAPEVADRIGDYVQCHGGVSLVEQMFQDPRLSQNKQALEGLGDLKLLFEYLTLF 288
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVLKD---QA------VGSVAGGGRYDNLVGMFDP 111
G+ D I FDLSLARGLDYYTGVIYEAVL QA VGSVA GGRYD LVGMFDP
Sbjct: 289 GIADKISFDLSLARGLDYYTGVIYEAVLLQTPTQAGEEPLNVGSVAAGGRYDGLVGMFDP 348
Query: 112 KNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYV 171
K PCV GL IGVER+F I+E R +G KV+TT TQV+V
Sbjct: 349 KGHKVPCV---------GL----------SIGVERIFYIVEQRMKTKGEKVRTTETQVFV 389
Query: 172 ASAQKNLVEPRMQLCHELW-GGEKTQ----EKPKL 201
A+ QKN ++ R++L ELW G K + PKL
Sbjct: 390 ATPQKNFLQERLKLIAELWDSGIKAEMLYKNNPKL 424
>UNIPROTKB|B4DQ67 [details] [associations]
symbol:HARS2 "Probable histidine--tRNA ligase,
mitochondrial" species:9606 "Homo sapiens" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004812 "aminoacyl-tRNA ligase activity"
evidence=IEA] InterPro:IPR004516 PIRSF:PIRSF001549
InterPro:IPR004154 GO:GO:0005737 GO:GO:0004812 SUPFAM:SSF52954
Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476 EMBL:AC116353
HOGENOM:HOG000018075 HOVERGEN:HBG002731 UniGene:Hs.432560
HGNC:HGNC:4817 EMBL:AK298661 IPI:IPI00909584 SMR:B4DQ67
STRING:B4DQ67 Ensembl:ENST00000448069 UCSC:uc011czt.2
Uniprot:B4DQ67
Length = 334
Score = 465 (168.7 bits), Expect = 6.9e-44, P = 6.9e-44
Identities = 113/215 (52%), Positives = 136/215 (63%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MV +K L+PEVAD+IG+YV HG V LVE + D L+++KQA EGL +KLLF Y ++
Sbjct: 82 MVVKKGLAPEVADRIGDYVQCHGGVSLVEQMFQDPRLSQNKQALEGLGDLKLLFEYLTLF 141
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVLKD---QA------VGSVAGGGRYDNLVGMFDP 111
G+ D I FDLSLARGLDYYTGVIYEAVL QA VGSVA GGRYD LVGMFDP
Sbjct: 142 GIADKISFDLSLARGLDYYTGVIYEAVLLQTPTQAGEEPLNVGSVAAGGRYDGLVGMFDP 201
Query: 112 KNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYV 171
K PCV GL IGVER+F I+E R +G KV+TT TQV+V
Sbjct: 202 KGHKVPCV---------GL----------SIGVERIFYIVEQRMKTKGEKVRTTETQVFV 242
Query: 172 ASAQKNLVEPRMQLCHELW-GGEKTQ----EKPKL 201
A+ QKN ++ R++L ELW G K + PKL
Sbjct: 243 ATPQKNFLQERLKLIAELWDSGIKAEMLYKNNPKL 277
>UNIPROTKB|C9JHI8 [details] [associations]
symbol:HARS2 "Probable histidine--tRNA ligase,
mitochondrial" species:9606 "Homo sapiens" [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR004516 PIRSF:PIRSF001549
InterPro:IPR004154 GO:GO:0005737 SUPFAM:SSF52954 Gene3D:3.40.50.800
Pfam:PF03129 PANTHER:PTHR11476 EMBL:AC116353 HOGENOM:HOG000018075
HGNC:HGNC:4817 IPI:IPI00940266 SMR:C9JHI8 STRING:C9JHI8
Ensembl:ENST00000432671 Uniprot:C9JHI8
Length = 392
Score = 465 (168.7 bits), Expect = 6.9e-44, P = 6.9e-44
Identities = 113/215 (52%), Positives = 136/215 (63%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MV +K L+PEVAD+IG+YV HG V LVE + D L+++KQA EGL +KLLF Y ++
Sbjct: 140 MVVKKGLAPEVADRIGDYVQCHGGVSLVEQMFQDPRLSQNKQALEGLGDLKLLFEYLTLF 199
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVLKD---QA------VGSVAGGGRYDNLVGMFDP 111
G+ D I FDLSLARGLDYYTGVIYEAVL QA VGSVA GGRYD LVGMFDP
Sbjct: 200 GIADKISFDLSLARGLDYYTGVIYEAVLLQTPTQAGEEPLNVGSVAAGGRYDGLVGMFDP 259
Query: 112 KNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYV 171
K PCV GL IGVER+F I+E R +G KV+TT TQV+V
Sbjct: 260 KGHKVPCV---------GL----------SIGVERIFYIVEQRMKTKGEKVRTTETQVFV 300
Query: 172 ASAQKNLVEPRMQLCHELW-GGEKTQ----EKPKL 201
A+ QKN ++ R++L ELW G K + PKL
Sbjct: 301 ATPQKNFLQERLKLIAELWDSGIKAEMLYKNNPKL 335
>UNIPROTKB|C9JV49 [details] [associations]
symbol:HARS2 "Probable histidine--tRNA ligase,
mitochondrial" species:9606 "Homo sapiens" [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR004516 PIRSF:PIRSF001549
InterPro:IPR004154 GO:GO:0005737 SUPFAM:SSF52954 Gene3D:3.40.50.800
Pfam:PF03129 PANTHER:PTHR11476 EMBL:AC116353 HOGENOM:HOG000018075
HGNC:HGNC:4817 IPI:IPI00942264 ProteinModelPortal:C9JV49 SMR:C9JV49
STRING:C9JV49 Ensembl:ENST00000435019 ArrayExpress:C9JV49
Bgee:C9JV49 Uniprot:C9JV49
Length = 466
Score = 465 (168.7 bits), Expect = 6.9e-44, P = 6.9e-44
Identities = 113/215 (52%), Positives = 136/215 (63%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MV +K L+PEVAD+IG+YV HG V LVE + D L+++KQA EGL +KLLF Y ++
Sbjct: 214 MVVKKGLAPEVADRIGDYVQCHGGVSLVEQMFQDPRLSQNKQALEGLGDLKLLFEYLTLF 273
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVLKD---QA------VGSVAGGGRYDNLVGMFDP 111
G+ D I FDLSLARGLDYYTGVIYEAVL QA VGSVA GGRYD LVGMFDP
Sbjct: 274 GIADKISFDLSLARGLDYYTGVIYEAVLLQTPTQAGEEPLNVGSVAAGGRYDGLVGMFDP 333
Query: 112 KNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYV 171
K PCV GL IGVER+F I+E R +G KV+TT TQV+V
Sbjct: 334 KGHKVPCV---------GL----------SIGVERIFYIVEQRMKTKGEKVRTTETQVFV 374
Query: 172 ASAQKNLVEPRMQLCHELW-GGEKTQ----EKPKL 201
A+ QKN ++ R++L ELW G K + PKL
Sbjct: 375 ATPQKNFLQERLKLIAELWDSGIKAEMLYKNNPKL 409
>UNIPROTKB|E9PG66 [details] [associations]
symbol:HARS2 "Probable histidine--tRNA ligase,
mitochondrial" species:9606 "Homo sapiens" [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR004516 PIRSF:PIRSF001549
InterPro:IPR004154 GO:GO:0005737 SUPFAM:SSF52954 Gene3D:3.40.50.800
Pfam:PF03129 PANTHER:PTHR11476 EMBL:AC116353 HGNC:HGNC:4817
IPI:IPI00910031 ProteinModelPortal:E9PG66 SMR:E9PG66
Ensembl:ENST00000437649 UCSC:uc011czs.2 ArrayExpress:E9PG66
Bgee:E9PG66 Uniprot:E9PG66
Length = 432
Score = 465 (168.7 bits), Expect = 6.9e-44, P = 6.9e-44
Identities = 113/215 (52%), Positives = 136/215 (63%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MV +K L+PEVAD+IG+YV HG V LVE + D L+++KQA EGL +KLLF Y ++
Sbjct: 180 MVVKKGLAPEVADRIGDYVQCHGGVSLVEQMFQDPRLSQNKQALEGLGDLKLLFEYLTLF 239
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVLKD---QA------VGSVAGGGRYDNLVGMFDP 111
G+ D I FDLSLARGLDYYTGVIYEAVL QA VGSVA GGRYD LVGMFDP
Sbjct: 240 GIADKISFDLSLARGLDYYTGVIYEAVLLQTPTQAGEEPLNVGSVAAGGRYDGLVGMFDP 299
Query: 112 KNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYV 171
K PCV GL IGVER+F I+E R +G KV+TT TQV+V
Sbjct: 300 KGHKVPCV---------GL----------SIGVERIFYIVEQRMKTKGEKVRTTETQVFV 340
Query: 172 ASAQKNLVEPRMQLCHELW-GGEKTQ----EKPKL 201
A+ QKN ++ R++L ELW G K + PKL
Sbjct: 341 ATPQKNFLQERLKLIAELWDSGIKAEMLYKNNPKL 375
>UNIPROTKB|P49590 [details] [associations]
symbol:HARS2 "Probable histidine--tRNA ligase,
mitochondrial" species:9606 "Homo sapiens" [GO:0006427
"histidyl-tRNA aminoacylation" evidence=IEA] [GO:0006412
"translation" evidence=NAS] [GO:0004821 "histidine-tRNA ligase
activity" evidence=NAS] [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0005524 "ATP binding" evidence=NAS] [GO:0005759 "mitochondrial
matrix" evidence=TAS] [GO:0006418 "tRNA aminoacylation for protein
translation" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] Reactome:REACT_71 InterPro:IPR002314
InterPro:IPR004516 InterPro:IPR006195 InterPro:IPR015807
Pfam:PF00587 PIRSF:PIRSF001549 PROSITE:PS50862 InterPro:IPR004154
GO:GO:0005524 GO:GO:0005759 GO:GO:0006418 SUPFAM:SSF52954
Orphanet:2855 Gene3D:3.40.50.800 Pfam:PF03129 CleanEx:HS_HARS2
PANTHER:PTHR11476 eggNOG:COG0124 KO:K01892 GO:GO:0004821
GO:GO:0006427 TIGRFAMs:TIGR00442 HOGENOM:HOG000018075
HOVERGEN:HBG002731 OrthoDB:EOG4D26PM EMBL:U18936 BRENDA:6.1.1.21
CTD:23438 EMBL:U18937 EMBL:BC007680 EMBL:BC014982 IPI:IPI00027445
PIR:I38913 PIR:I38915 RefSeq:NP_036340.1 UniGene:Hs.432560
ProteinModelPortal:P49590 SMR:P49590 DIP:DIP-59626N IntAct:P49590
STRING:P49590 PhosphoSite:P49590 DMDM:1351156 PaxDb:P49590
PeptideAtlas:P49590 PRIDE:P49590 DNASU:23438
Ensembl:ENST00000230771 GeneID:23438 KEGG:hsa:23438 UCSC:uc003lgx.3
GeneCards:GC05P140053 HGNC:HGNC:4817 HPA:HPA035941 MIM:600783
neXtProt:NX_P49590 PharmGKB:PA29192 InParanoid:P49590 OMA:CGGGNFK
GenomeRNAi:23438 NextBio:45705 ArrayExpress:P49590 Bgee:P49590
Genevestigator:P49590 GermOnline:ENSG00000112855 Uniprot:P49590
Length = 506
Score = 465 (168.7 bits), Expect = 6.9e-44, P = 6.9e-44
Identities = 113/215 (52%), Positives = 136/215 (63%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MV +K L+PEVAD+IG+YV HG V LVE + D L+++KQA EGL +KLLF Y ++
Sbjct: 254 MVVKKGLAPEVADRIGDYVQCHGGVSLVEQMFQDPRLSQNKQALEGLGDLKLLFEYLTLF 313
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVLKD---QA------VGSVAGGGRYDNLVGMFDP 111
G+ D I FDLSLARGLDYYTGVIYEAVL QA VGSVA GGRYD LVGMFDP
Sbjct: 314 GIADKISFDLSLARGLDYYTGVIYEAVLLQTPTQAGEEPLNVGSVAAGGRYDGLVGMFDP 373
Query: 112 KNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYV 171
K PCV GL IGVER+F I+E R +G KV+TT TQV+V
Sbjct: 374 KGHKVPCV---------GL----------SIGVERIFYIVEQRMKTKGEKVRTTETQVFV 414
Query: 172 ASAQKNLVEPRMQLCHELW-GGEKTQ----EKPKL 201
A+ QKN ++ R++L ELW G K + PKL
Sbjct: 415 ATPQKNFLQERLKLIAELWDSGIKAEMLYKNNPKL 449
>UNIPROTKB|F1NEE7 [details] [associations]
symbol:HARS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004821 "histidine-tRNA ligase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006427 "histidyl-tRNA aminoacylation"
evidence=IEA] InterPro:IPR000738 InterPro:IPR004516
InterPro:IPR006195 InterPro:IPR015807 Pfam:PF00458
PIRSF:PIRSF001549 PROSITE:PS50862 PROSITE:PS51185 SMART:SM00991
InterPro:IPR004154 GO:GO:0005524 GO:GO:0005737 SUPFAM:SSF52954
Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476
Gene3D:1.10.287.10 InterPro:IPR009068 SUPFAM:SSF47060 GO:GO:0004821
GO:GO:0006427 TIGRFAMs:TIGR00442 GeneTree:ENSGT00390000005922
EMBL:AADN02063754 EMBL:AADN02063755 IPI:IPI00821125
Ensembl:ENSGALT00000041275 ArrayExpress:F1NEE7 Uniprot:F1NEE7
Length = 501
Score = 459 (166.6 bits), Expect = 3.4e-43, P = 3.4e-43
Identities = 112/215 (52%), Positives = 136/215 (63%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MVGEK LSPE AD+IGEYV HG +DL+E LL D L+++K KEGL +KLLF Y ++
Sbjct: 249 MVGEKGLSPEAADRIGEYVQLHGGMDLIEQLLQDPKLSQNKLVKEGLGDMKLLFEYLTLF 308
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVLKDQ---------AVGSVAGGGRYDNLVGMFDP 111
G+ I FDLSLARGLDYYTGVIYEAVL Q +VGSVAGGGRYD LVGMFDP
Sbjct: 309 GITGKISFDLSLARGLDYYTGVIYEAVLLQQENDHGEESVSVGSVAGGGRYDGLVGMFDP 368
Query: 112 KNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYV 171
K + PC GL C C G++ L++I + A K++TT TQV V
Sbjct: 369 KGRKVPC---------PGL----C--C----GLDVLWTISRQKLAASEEKIRTTETQVLV 409
Query: 172 ASAQKNLVEPRMQLCHELW-GGEKTQ----EKPKL 201
ASAQK L+E R++L ELW G K + + PKL
Sbjct: 410 ASAQKKLLEERLKLISELWDAGIKAEVLYKKNPKL 444
>ASPGD|ASPL0000038959 [details] [associations]
symbol:AN10414 species:162425 "Emericella nidulans"
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
InterPro:IPR027076 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 EMBL:BN001306 GO:GO:0004003
PANTHER:PTHR11472:SF5 TIGRFAMs:TIGR00604 OMA:NLGRCVV
EnsemblFungi:CADANIAT00009590 Uniprot:C8VHC2
Length = 841
Score = 471 (170.9 bits), Expect = 8.5e-43, Sum P(2) = 8.5e-43
Identities = 105/267 (39%), Positives = 162/267 (60%)
Query: 424 NNPNLSKPSEGGIEEAPSQVQ---EDQVRNPML-SVVTFLESLVNKNEDGRILVTKNPEL 479
N L++ +G I+ + S+ E + P+L + +FL L+N + +GR+ TK P
Sbjct: 456 NESKLARKVDGYIDFSQSKANAQAEPKSTIPVLFHIQSFLLPLMNLSSEGRLFFTKTPGD 515
Query: 480 SKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCG 539
+ H Y+LL+P NHF +IV+DAR++I+AGGTM P+S++ + LF VP+ R++ FS G
Sbjct: 516 IQLH--YMLLDPTNHFREIVEDARAVILAGGTMSPMSDYLNHLFSY--VPKDRLNTFSYG 571
Query: 540 HVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSY 599
HVIP EN+ L G T +FD T+ R + ++ T T LC +P G+V FFPSY
Sbjct: 572 HVIPSENLTAHTLARGVTGCEFDFTYAGRDAEKMILDLGRTFTQLCRAIPDGIVAFFPSY 631
Query: 600 DYEAIVYNYMRDNHFIER----IARIAKKKVVFREPKKTS-EVDKVLSDYGTSVEKG-GA 653
+Y + V N ++ E + K+K + E ++T D +L++Y ++ KG GA
Sbjct: 632 EYLSRVLNIWKNAVVRENKQTLYETVEKEKQILYESRETELTTDDLLNNYANTINKGRGA 691
Query: 654 LMLSVIGGKLSEGLNFSDDLGRCVVVM 680
L+LSV+GGKLSEG+NFSD LGR V+++
Sbjct: 692 LLLSVVGGKLSEGINFSDKLGRGVLIV 718
Score = 343 (125.8 bits), Expect = 8.4e-28, P = 8.4e-28
Identities = 76/202 (37%), Positives = 117/202 (57%)
Query: 214 NNPNLSKPPEGGIEEAPSQVQ---EDQVRNPML-SVVTFLESLVNKNEDGRILVTKNPEL 269
N L++ +G I+ + S+ E + P+L + +FL L+N + +GR+ TK P
Sbjct: 456 NESKLARKVDGYIDFSQSKANAQAEPKSTIPVLFHIQSFLLPLMNLSSEGRLFFTKTPGD 515
Query: 270 SKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCG 329
+ H Y+LL+P NHF +IV+DAR++I+AGGTM P+S++ + LF VP+ R++ FS G
Sbjct: 516 IQLH--YMLLDPTNHFREIVEDARAVILAGGTMSPMSDYLNHLFSY--VPKDRLNTFSYG 571
Query: 330 HVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSY 389
HVIP EN+ L G T +FD T+ R + ++ T T LC +P G+V FFPSY
Sbjct: 572 HVIPSENLTAHTLARGVTGCEFDFTYAGRDAEKMILDLGRTFTQLCRAIPDGIVAFFPSY 631
Query: 390 DYEAIVYNYMPDIEKTQEKPKL 411
+Y + V N + + K L
Sbjct: 632 EYLSRVLNIWKNAVVRENKQTL 653
Score = 45 (20.9 bits), Expect = 8.5e-43, Sum P(2) = 8.5e-43
Identities = 10/35 (28%), Positives = 21/35 (60%)
Query: 246 VTFLESLVNKNEDGRILVTKNPELSKSHIKYILLN 280
V F++SL E+G++ + ++P S ++ I L+
Sbjct: 28 VRFMQSLYECLEEGKVAIFESPTGSGPRLQIIELS 62
>UNIPROTKB|A5D7V9 [details] [associations]
symbol:HARS2 "Probable histidine--tRNA ligase,
mitochondrial" species:9913 "Bos taurus" [GO:0005759 "mitochondrial
matrix" evidence=IEA] [GO:0004821 "histidine-tRNA ligase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006427
"histidyl-tRNA aminoacylation" evidence=IEA] InterPro:IPR004516
InterPro:IPR006195 InterPro:IPR015807 PIRSF:PIRSF001549
PROSITE:PS50862 InterPro:IPR004154 GO:GO:0005524 GO:GO:0005759
SUPFAM:SSF52954 Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476
eggNOG:COG0124 KO:K01892 GO:GO:0004821 GO:GO:0006427
TIGRFAMs:TIGR00442 HOGENOM:HOG000018075 HOVERGEN:HBG002731
OrthoDB:EOG4D26PM EMBL:BC140699 IPI:IPI00852471
RefSeq:NP_001091602.1 UniGene:Bt.28199 STRING:A5D7V9 PRIDE:A5D7V9
GeneID:615182 KEGG:bta:615182 CTD:23438 InParanoid:A5D7V9
NextBio:20899487 Uniprot:A5D7V9
Length = 506
Score = 451 (163.8 bits), Expect = 2.8e-42, P = 2.8e-42
Identities = 107/215 (49%), Positives = 134/215 (62%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MV +K L+PEVAD+IG+YV HG + LVE + D L+++KQA EGL +KLLF Y ++
Sbjct: 254 MVVKKGLAPEVADRIGDYVQCHGGISLVEQMFQDPRLSQNKQALEGLGDLKLLFEYLTLF 313
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVLKDQAV---------GSVAGGGRYDNLVGMFDP 111
G+ + + FDLSLARGLDYYTGVIYEAVL V GSVA GGRYD LVGMFDP
Sbjct: 314 GVAEKVSFDLSLARGLDYYTGVIYEAVLLQTPVHAEEEPLNMGSVAAGGRYDGLVGMFDP 373
Query: 112 KNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYV 171
+ PCV GL IGVER+FSI+E R G K++TT TQV+V
Sbjct: 374 RGHKVPCV---------GL----------SIGVERIFSIVEQRIKTFGEKIRTTETQVFV 414
Query: 172 ASAQKNLVEPRMQLCHELW-GGEKTQ----EKPKL 201
A+ QKN ++ R++L ELW G K + PKL
Sbjct: 415 ATPQKNFLQERLKLIAELWDAGIKAELMYKNNPKL 449
>UNIPROTKB|F1N0T6 [details] [associations]
symbol:HARS2 "Probable histidine--tRNA ligase,
mitochondrial" species:9913 "Bos taurus" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006427 "histidyl-tRNA
aminoacylation" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004821 "histidine-tRNA ligase activity"
evidence=IEA] InterPro:IPR004516 InterPro:IPR006195
InterPro:IPR015807 PIRSF:PIRSF001549 PROSITE:PS50862
InterPro:IPR004154 GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF52954
Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476 OMA:NKIKRAC
GO:GO:0004821 GO:GO:0006427 TIGRFAMs:TIGR00442
GeneTree:ENSGT00390000005922 IPI:IPI00852471 UniGene:Bt.28199
EMBL:DAAA02020432 Ensembl:ENSBTAT00000035338 Uniprot:F1N0T6
Length = 506
Score = 451 (163.8 bits), Expect = 2.8e-42, P = 2.8e-42
Identities = 107/215 (49%), Positives = 134/215 (62%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MV +K L+PEVAD+IG+YV HG + LVE + D L+++KQA EGL +KLLF Y ++
Sbjct: 254 MVVKKGLAPEVADRIGDYVQCHGGISLVEQMFQDPRLSQNKQALEGLGDLKLLFEYLTLF 313
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVLKDQAV---------GSVAGGGRYDNLVGMFDP 111
G+ + + FDLSLARGLDYYTGVIYEAVL V GSVA GGRYD LVGMFDP
Sbjct: 314 GVAEKVSFDLSLARGLDYYTGVIYEAVLLQTPVHAEEEPLNMGSVAAGGRYDGLVGMFDP 373
Query: 112 KNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYV 171
+ PCV GL IGVER+FSI+E R G K++TT TQV+V
Sbjct: 374 RGHKVPCV---------GL----------SIGVERIFSIVEQRIKTFGEKIRTTETQVFV 414
Query: 172 ASAQKNLVEPRMQLCHELW-GGEKTQ----EKPKL 201
A+ QKN ++ R++L ELW G K + PKL
Sbjct: 415 ATPQKNFLQERLKLIAELWDAGIKAELMYKNNPKL 449
>MGI|MGI:1918041 [details] [associations]
symbol:Hars2 "histidyl-tRNA synthetase 2, mitochondrial
(putative)" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004812 "aminoacyl-tRNA ligase activity"
evidence=IEA] [GO:0004821 "histidine-tRNA ligase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006412 "translation" evidence=IEA] [GO:0006418 "tRNA
aminoacylation for protein translation" evidence=IEA] [GO:0006427
"histidyl-tRNA aminoacylation" evidence=IEA] [GO:0016874 "ligase
activity" evidence=IEA] InterPro:IPR004516 InterPro:IPR006195
InterPro:IPR015807 PIRSF:PIRSF001549 PROSITE:PS50862
InterPro:IPR004154 MGI:MGI:1918041 GO:GO:0005739 GO:GO:0005524
GO:GO:0005759 SUPFAM:SSF52954 Gene3D:3.40.50.800 Pfam:PF03129
PANTHER:PTHR11476 eggNOG:COG0124 KO:K01892 OMA:NKIKRAC
GO:GO:0004821 GO:GO:0006427 TIGRFAMs:TIGR00442
GeneTree:ENSGT00390000005922 HOGENOM:HOG000018075
HOVERGEN:HBG002731 CTD:23438 EMBL:BC004596 IPI:IPI00116138
RefSeq:NP_542367.1 UniGene:Mm.282700 ProteinModelPortal:Q99KK9
SMR:Q99KK9 STRING:Q99KK9 PhosphoSite:Q99KK9 PaxDb:Q99KK9
PRIDE:Q99KK9 DNASU:70791 Ensembl:ENSMUST00000152954 GeneID:70791
KEGG:mmu:70791 UCSC:uc008eor.1 InParanoid:Q99KK9 NextBio:332262
Bgee:Q99KK9 Genevestigator:Q99KK9 GermOnline:ENSMUSG00000019143
Uniprot:Q99KK9
Length = 505
Score = 439 (159.6 bits), Expect = 6.3e-41, P = 6.3e-41
Identities = 105/215 (48%), Positives = 135/215 (62%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MV +K L+PEVAD+IG++V HG + LVE+L D L++S+ A +GL +KLLF Y +++
Sbjct: 253 MVAKKGLAPEVADRIGDFVQYHGGISLVEDLFKDPRLSQSQLALQGLGDLKLLFEYLRLF 312
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVLKD---QA------VGSVAGGGRYDNLVGMFDP 111
G+ D I DLSLARGLDYYTGVIYEAVL + QA VGSVA GGRYDNLV FDP
Sbjct: 313 GIADKISLDLSLARGLDYYTGVIYEAVLLESPAQAGKETLSVGSVAAGGRYDNLVAQFDP 372
Query: 112 KNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYV 171
K PCV GL IGVER+F ++E + G KV+TT TQV+V
Sbjct: 373 KGHHVPCV---------GL----------SIGVERIFYLVEQKMKMSGEKVRTTETQVFV 413
Query: 172 ASAQKNLVEPRMQLCHELW-GGEKTQ----EKPKL 201
A+ QKN ++ R+++ ELW G K + PKL
Sbjct: 414 ATPQKNFLQERLKIIAELWDAGIKAEMLYKNNPKL 448
>CGD|CAL0004313 [details] [associations]
symbol:orf19.2000 species:5476 "Candida albicans" [GO:0003678
"DNA helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0007535
"donor selection" evidence=IEA] [GO:0045910 "negative regulation of
DNA recombination" evidence=IEA] [GO:0006270 "DNA replication
initiation" evidence=IEA] [GO:0007064 "mitotic sister chromatid
cohesion" evidence=IEA] InterPro:IPR002464 InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
InterPro:IPR027076 Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0007049
GO:GO:0004003 EMBL:AACQ01000031 EMBL:AACQ01000030
RefSeq:XP_719450.1 RefSeq:XP_719578.1 ProteinModelPortal:Q5AD67
STRING:Q5AD67 GeneID:3638692 GeneID:3638794 KEGG:cal:CaO19.2000
KEGG:cal:CaO19.9551 eggNOG:COG1199 KO:K11273 PANTHER:PTHR11472:SF5
TIGRFAMs:TIGR00604 Uniprot:Q5AD67
Length = 842
Score = 446 (162.1 bits), Expect = 2.4e-39, P = 2.4e-39
Identities = 100/278 (35%), Positives = 164/278 (58%)
Query: 408 KPKLS-GLQSFLKGVQENNPNLSKPSEGGIEEAPSQVQEDQVRNPML-SVVTFLESLVNK 465
K K++ ++S+++ + N K +G I + NP+L +++ FL +L N
Sbjct: 459 KSKIAYKIESYIEKTEMETDNGEK--KGRITNSGGSSSSSSSSNPLLFTIIKFLRTLTNL 516
Query: 466 NEDGRILV-TKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFG 524
+++G+ +N +S + Y+LL+P+ F +IV A+ +++ GGTMEP+S++ D LF
Sbjct: 517 SKEGKFFWDNENGTIS---LNYMLLDPSAVFKEIVDQAKCVLLCGGTMEPMSDYMDYLFP 573
Query: 525 SLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNL 584
S VP ++I+ F+CGHVIPKEN L + S + F+ +++ R L + + +
Sbjct: 574 S--VPTNKINTFACGHVIPKEN-LQVFPISQWNDTNFEFSYQKRNDSKQLMALGEFLIEI 630
Query: 585 CTIVPKGMVCFFPSYDYEAIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDY 644
VP G+V FFPSY Y V + RD + I +K +FREPK S V+KVL++Y
Sbjct: 631 TKRVPYGVVIFFPSYKYLDQVLQFWRDTKIL---TSIESEKTIFREPKDPSNVEKVLNEY 687
Query: 645 GTSV--EKGGALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
G + E+ GA++ SV+GGK+SEG+NFSDDL R V+++
Sbjct: 688 GYLIQTERKGAILFSVVGGKMSEGINFSDDLARAVIMV 725
Score = 285 (105.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 104/400 (26%), Positives = 185/400 (46%)
Query: 17 EYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY----GLKDTIVFDLSL 72
+Y+ K+ + V AD LAK + E L + + + C Y G++ T + L
Sbjct: 277 QYLPKNYMMSSVTKEFADLSLAKIRDI-EDLNELGIELNICPYYSVRKGIEMTEIISLPY 335
Query: 73 ARGLDYYTGVIYEAVLKDQAVGSVAGGGRYDNLVGMFDPKNKTTPCVAAKLLHEVQGLLE 132
T I +KD + D + M+ K T K++ ++ L
Sbjct: 336 QMIFQDTTRKILNLDIKDSIIIIDEAHNIIDVITSMYSIK--ITSDQLNKVIKSLKIYLN 393
Query: 133 TSCRSCRED--IGVERLFSIIE------NRNAEQGVKVKTTSTQVYVASAQKNLVEPRMQ 184
+ I + +L I + N N+E KVK+ +V + K+ +
Sbjct: 394 KFLKRLNSGNRINLMKLIKICQILLKFLNTNSE---KVKS-GDEVQIQDIFKDSTGDLVN 449
Query: 185 LCHELWGGEKTQEKPKLS-GLQSFLKGVQENNPNLSKPPEGGIEEAPSQVQEDQVRNPML 243
+ H+L ++ K K++ ++S+++ + N K +G I + NP+L
Sbjct: 450 I-HKL---DQFLTKSKIAYKIESYIEKTEMETDNGEK--KGRITNSGGSSSSSSSSNPLL 503
Query: 244 -SVVTFLESLVNKNEDGRILV-TKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGT 301
+++ FL +L N +++G+ +N +S + Y+LL+P+ F +IV A+ +++ GGT
Sbjct: 504 FTIIKFLRTLTNLSKEGKFFWDNENGTIS---LNYMLLDPSAVFKEIVDQAKCVLLCGGT 560
Query: 302 MEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKG 361
MEP+S++ D LF S VP ++I+ F+CGHVIPKEN L + S + F+ +++ R
Sbjct: 561 MEPMSDYMDYLFPS--VPTNKINTFACGHVIPKEN-LQVFPISQWNDTNFEFSYQKRNDS 617
Query: 362 DTLKEIAMTITNLCTIVPKGMVCFFPSYDYEAIVYNYMPD 401
L + + + VP G+V FFPSY Y V + D
Sbjct: 618 KQLMALGEFLIEITKRVPYGVVIFFPSYKYLDQVLQFWRD 657
>RGD|1308426 [details] [associations]
symbol:Hars2 "histidyl-tRNA synthetase 2, mitochondrial"
species:10116 "Rattus norvegicus" [GO:0005739 "mitochondrion"
evidence=ISO] InterPro:IPR004516 InterPro:IPR004154 RGD:1308426
GO:GO:0005739 GO:GO:0004812 SUPFAM:SSF52954 Gene3D:3.40.50.800
Pfam:PF03129 PANTHER:PTHR11476 eggNOG:COG0124 KO:K01892
HOGENOM:HOG000018075 HOVERGEN:HBG002731 OrthoDB:EOG4D26PM CTD:23438
IPI:IPI00562572 RefSeq:NP_001014034.2 UniGene:Rn.139312
GeneID:307491 KEGG:rno:307491 NextBio:657480 EMBL:BC089973
ProteinModelPortal:Q5EB72 STRING:Q5EB72 UCSC:RGD:1308426
InParanoid:Q5EB72 ArrayExpress:Q5EB72 Genevestigator:Q5EB72
Uniprot:Q5EB72
Length = 262
Score = 422 (153.6 bits), Expect = 5.0e-39, P = 5.0e-39
Identities = 103/215 (47%), Positives = 132/215 (61%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MV K L+PEVAD+IG+YV HG + LVE L D L++S+ A +GL +KLLF Y +++
Sbjct: 10 MVAGKGLAPEVADRIGDYVQCHGGISLVEELFKDPRLSQSQLALQGLGDLKLLFEYLRLF 69
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVLKD---QA------VGSVAGGGRYDNLVGMFDP 111
G+ D I DLSLARGLDYYTGVIYEAVL + QA VGSVA GGRYD LV FDP
Sbjct: 70 GIADKISLDLSLARGLDYYTGVIYEAVLLESPAQAGKETLNVGSVAAGGRYDRLVAQFDP 129
Query: 112 KNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYV 171
K + PCV GL IGVER+F ++E + KV+TT TQV+V
Sbjct: 130 KGHSVPCV---------GL----------SIGVERIFYLVEQKMKISCEKVRTTETQVFV 170
Query: 172 ASAQKNLVEPRMQLCHELW-GGEKTQ----EKPKL 201
A+ QKN ++ R+++ +LW G K + PKL
Sbjct: 171 ATPQKNFLQERLKIIAQLWDAGIKAEMLYKNNPKL 205
>UNIPROTKB|F1M9C9 [details] [associations]
symbol:Hars2l "Protein Hars2l" species:10116 "Rattus
norvegicus" [GO:0004821 "histidine-tRNA ligase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006427 "histidyl-tRNA
aminoacylation" evidence=IEA] InterPro:IPR004516 InterPro:IPR006195
InterPro:IPR015807 PIRSF:PIRSF001549 PROSITE:PS50862
InterPro:IPR004154 GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF52954
Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476 KO:K01892
GO:GO:0004821 GO:GO:0006427 TIGRFAMs:TIGR00442
GeneTree:ENSGT00390000005922 CTD:23438 IPI:IPI00562572
RefSeq:NP_001014034.2 UniGene:Rn.139312 Ensembl:ENSRNOT00000021797
GeneID:307491 KEGG:rno:307491 OMA:VVDGMFA NextBio:657480
ArrayExpress:F1M9C9 Uniprot:F1M9C9
Length = 507
Score = 422 (153.6 bits), Expect = 5.0e-39, P = 5.0e-39
Identities = 103/215 (47%), Positives = 132/215 (61%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MV K L+PEVAD+IG+YV HG + LVE L D L++S+ A +GL +KLLF Y +++
Sbjct: 255 MVAGKGLAPEVADRIGDYVQCHGGISLVEELFKDPRLSQSQLALQGLGDLKLLFEYLRLF 314
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVLKD---QA------VGSVAGGGRYDNLVGMFDP 111
G+ D I DLSLARGLDYYTGVIYEAVL + QA VGSVA GGRYD LV FDP
Sbjct: 315 GIADKISLDLSLARGLDYYTGVIYEAVLLESPAQAGKETLNVGSVAAGGRYDRLVAQFDP 374
Query: 112 KNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYV 171
K + PCV GL IGVER+F ++E + KV+TT TQV+V
Sbjct: 375 KGHSVPCV---------GL----------SIGVERIFYLVEQKMKISCEKVRTTETQVFV 415
Query: 172 ASAQKNLVEPRMQLCHELW-GGEKTQ----EKPKL 201
A+ QKN ++ R+++ +LW G K + PKL
Sbjct: 416 ATPQKNFLQERLKIIAQLWDAGIKAEMLYKNNPKL 450
>UNIPROTKB|E7ETE2 [details] [associations]
symbol:HARS "Histidine--tRNA ligase, cytoplasmic"
species:9606 "Homo sapiens" [GO:0004812 "aminoacyl-tRNA ligase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006418 "tRNA aminoacylation for protein translation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000738 InterPro:IPR004516 Pfam:PF00458 PROSITE:PS00762
PROSITE:PS51185 SMART:SM00991 GO:GO:0005524 GO:GO:0005737
GO:GO:0006418 GO:GO:0004812 PANTHER:PTHR11476 EMBL:AC116353
Gene3D:1.10.287.10 InterPro:IPR009068 SUPFAM:SSF47060
HGNC:HGNC:4816 ChiTaRS:HARS IPI:IPI00909075
ProteinModelPortal:E7ETE2 SMR:E7ETE2 Ensembl:ENST00000507746
ArrayExpress:E7ETE2 Bgee:E7ETE2 Uniprot:E7ETE2
Length = 288
Score = 401 (146.2 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 95/163 (58%), Positives = 109/163 (66%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MVGEK L+PEVAD+IG+YV +HG V LVE LL D L+++KQA EGL +KLLF Y ++
Sbjct: 143 MVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKLSQNKQALEGLGDLKLLFEYLTLF 202
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVLKD---QA------VGSVAGGGRYDNLVGMFDP 111
G+ D I FDLSLARGLDYYTGVIYEAVL QA VGSVA GGRYD LVGMFDP
Sbjct: 203 GIDDKISFDLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAGGRYDGLVGMFDP 262
Query: 112 KNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENR 154
K + PCV GL IGVER+FSI+E R
Sbjct: 263 KGRKVPCV---------GL----------SIGVERIFSIVEQR 286
>WB|WBGene00010839 [details] [associations]
symbol:chl-1 species:6239 "Caenorhabditis elegans"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 InterPro:IPR027076
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0003677 GO:GO:0004003 eggNOG:COG1199
PANTHER:PTHR11472:SF5 TIGRFAMs:TIGR00604 HOGENOM:HOG000241266
OMA:NLGRCVV GeneTree:ENSGT00530000063199 EMBL:Z49128
RefSeq:NP_499295.2 ProteinModelPortal:Q21489 SMR:Q21489
STRING:Q21489 PaxDb:Q21489 EnsemblMetazoa:M03C11.2 GeneID:176457
KEGG:cel:CELE_M03C11.2 UCSC:M03C11.2 CTD:176457 WormBase:M03C11.2
InParanoid:Q21489 NextBio:892664 Uniprot:Q21489
Length = 830
Score = 420 (152.9 bits), Expect = 2.2e-36, P = 2.2e-36
Identities = 105/283 (37%), Positives = 163/283 (57%)
Query: 401 DIEKTQEKPKLSGLQSFLKGVQENNPNLSKPSEGGIEEAPSQVQEDQVRNPMLSVVTFLE 460
+I+K EKPKL+G+Q L +E P +P EA V +P+ S+ +F++
Sbjct: 465 EIKKENEKPKLTGIQK-LMAAKEAEP---EP------EAEPLPPPKPVPSPLFSLKSFID 514
Query: 461 SLVNKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKD 520
+L NK EDGRI+V K+ +K +++LLNPA+ +++V AR+ I+ GGTMEP +
Sbjct: 515 ALTNKCEDGRIIVEKSATEAK--FRFMLLNPADRLSEVVTSARATILVGGTMEPAQLLVE 572
Query: 521 QLF-GSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAM 579
L GS+G I FSC HVI +L + + + F LT++ R TL+ +A
Sbjct: 573 TLSRGSIGADS--IRRFSCCHVIDDSQLLAVTVERTVDGKPFQLTYQTRGADTTLRSLAT 630
Query: 580 TITNLCTIVPKGMVCFFPSYDYEAIVYNYMRDNHFIERIARIAKKKVVFREPKK-TSEV- 637
+I L +P G+V F PSYD+ ++N+ + + RI +KK VF E ++ TS+V
Sbjct: 631 SIQALIPHIPNGVVIFVPSYDF---LFNFQKKMKEFGILKRIEEKKAVFTESRQPTSDVW 687
Query: 638 DKVLSDYGTSVEKGGALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
D+ TS GA++ +V+GGK+SEG+NF D+LGR V+V+
Sbjct: 688 DRFSRAAKTSK---GAILFAVVGGKMSEGINFCDELGRAVIVI 727
Score = 300 (110.7 bits), Expect = 4.3e-23, P = 4.3e-23
Identities = 75/213 (35%), Positives = 118/213 (55%)
Query: 193 EKTQEKPKLSGLQSFLKGVQENNPNLSKPPEGGIEEAPSQVQEDQVRNPMLSVVTFLESL 252
+K EKPKL+G+Q L +E P PE E P V +P+ S+ +F+++L
Sbjct: 467 KKENEKPKLTGIQK-LMAAKEAEPE----PEA--EPLPPP---KPVPSPLFSLKSFIDAL 516
Query: 253 VNKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQL 312
NK EDGRI+V K+ +K +++LLNPA+ +++V AR+ I+ GGTMEP + L
Sbjct: 517 TNKCEDGRIIVEKSATEAK--FRFMLLNPADRLSEVVTSARATILVGGTMEPAQLLVETL 574
Query: 313 F-GSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTI 371
GS+G I FSC HVI +L + + + F LT++ R TL+ +A +I
Sbjct: 575 SRGSIGADS--IRRFSCCHVIDDSQLLAVTVERTVDGKPFQLTYQTRGADTTLRSLATSI 632
Query: 372 TNLCTIVPKGMVCFFPSYDYEAIVYNYMPDIEK 404
L +P G+V F PSYD+ ++N+ +++
Sbjct: 633 QALIPHIPNGVVIFVPSYDF---LFNFQKKMKE 662
>ZFIN|ZDB-GENE-040912-152 [details] [associations]
symbol:hars "histidyl-tRNA synthetase" species:7955
"Danio rerio" [GO:0004812 "aminoacyl-tRNA ligase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006418 "tRNA aminoacylation for
protein translation" evidence=IEA] [GO:0006427 "histidyl-tRNA
aminoacylation" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004821 "histidine-tRNA ligase activity"
evidence=IEA] InterPro:IPR004516 InterPro:IPR006195
InterPro:IPR015807 PIRSF:PIRSF001549 PROSITE:PS50862
InterPro:IPR004154 HAMAP:MF_00127 ZFIN:ZDB-GENE-040912-152
GO:GO:0005524 GO:GO:0005737 SUPFAM:SSF52954 Gene3D:3.40.50.800
Pfam:PF03129 PANTHER:PTHR11476 GO:GO:0004821 GO:GO:0006427
TIGRFAMs:TIGR00442 GeneTree:ENSGT00390000005922 EMBL:BX890575
IPI:IPI00494483 Ensembl:ENSDART00000141471 ArrayExpress:F1Q5D5
Bgee:F1Q5D5 Uniprot:F1Q5D5
Length = 520
Score = 375 (137.1 bits), Expect = 8.1e-33, P = 8.1e-33
Identities = 99/214 (46%), Positives = 125/214 (58%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MV EK LS EVAD+I +YV G DL E LL D L++SKQA G+ +KLLF Y +++
Sbjct: 260 MVNEKGLSEEVADRIRDYVSMQGGKDLAERLLQDPKLSQSKQACAGITDMKLLFSYLELF 319
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVLKDQAVGSVAGGGRYDNLVGMFDPKNKTTPCVA 120
+ D +VFDLSLARGLDYYTGVIYEA+L QA + A N G D
Sbjct: 320 QITDKVVFDLSLARGLDYYTGVIYEAILT-QANPAPASTPAEQN--GAEDAGVSVGSVAG 376
Query: 121 AKLLHEVQGLLETSCRS--C-REDIGVERLFSIIENRNAEQGVKVKTTSTQVYVASAQKN 177
+ G+ + R C IG+ER+FSI+E + KV+TT TQV VASAQKN
Sbjct: 377 GGRYDGLVGMFDPKGRKVPCVGVSIGIERVFSIMEQKAELSSEKVRTTETQVLVASAQKN 436
Query: 178 LVEPRMQLCHELWG-GEKTQ----EKPKL-SGLQ 205
L+E R++L ELW G K + + PKL S LQ
Sbjct: 437 LLEERLKLTAELWNAGIKAEVLYKKNPKLLSQLQ 470
>FB|FBgn0027087 [details] [associations]
symbol:Aats-his "Histidyl-tRNA synthetase" species:7227
"Drosophila melanogaster" [GO:0004821 "histidine-tRNA ligase
activity" evidence=ISS;NAS] [GO:0006427 "histidyl-tRNA
aminoacylation" evidence=IEA;NAS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000738 InterPro:IPR004516 InterPro:IPR006195
PROSITE:PS50862 PROSITE:PS51185 SMART:SM00991 InterPro:IPR004154
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006418
SUPFAM:SSF52954 Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476
eggNOG:COG0124 KO:K01892 Gene3D:1.10.287.10 InterPro:IPR009068
GO:GO:0004821 RefSeq:NP_573305.1 UniGene:Dm.11373 HSSP:P56194
ProteinModelPortal:Q8IQX8 SMR:Q8IQX8 STRING:Q8IQX8 PaxDb:Q8IQX8
PRIDE:Q8IQX8 GeneID:32841 KEGG:dme:Dmel_CG6335 UCSC:CG6335-RB
CTD:32841 FlyBase:FBgn0027087 InParanoid:Q8IQX8 OMA:EAFETEM
OrthoDB:EOG44XGZ0 PhylomeDB:Q8IQX8 ChiTaRS:Aats-his
GenomeRNAi:32841 NextBio:780657 ArrayExpress:Q8IQX8 Bgee:Q8IQX8
Uniprot:Q8IQX8
Length = 563
Score = 368 (134.6 bits), Expect = 2.7e-31, P = 2.7e-31
Identities = 90/207 (43%), Positives = 123/207 (59%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MV EK L AD+IGEYV G +LVE LLA+E L A +GLE +K L YC I+
Sbjct: 297 MVDEKGLDEAAADRIGEYVRLSGGAELVEQLLANEKLKAVPNAVKGLEGMKQLLKYCSIF 356
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVLKDQAVGSVAGGGRYDNLVGMFDPKNKTTPCVA 120
GL + FDLSLARGLDYYTGVIYE VLK ++ +VA + G + T VA
Sbjct: 357 GLDKRVSFDLSLARGLDYYTGVIYEGVLKGESA-TVASPAKTSQQNGEQANEPATVGSVA 415
Query: 121 AKLLHE-VQGLLETSCRS--C-REDIGVERLFSIIENRNAEQGVKVKTTSTQVYVASAQK 176
++ + G+ + ++ C IGVER+FS++E R A G+K++T+ +VYVASA K
Sbjct: 416 GGGRYDNLVGMFDPRGKAVPCVGVSIGVERIFSVLEARAAASGLKLRTSDVEVYVASAHK 475
Query: 177 NLVEPRMQLCHELW-GGEKTQEKPKLS 202
L E R+++ + LW G K + KL+
Sbjct: 476 GLHEQRLKVLNLLWDAGVKAEHSYKLN 502
>SGD|S000005929 [details] [associations]
symbol:CHL1 "Probable DNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0007059 "chromosome segregation"
evidence=IDA] [GO:0003678 "DNA helicase activity" evidence=ISS;IMP]
[GO:0006270 "DNA replication initiation" evidence=IMP] [GO:0007064
"mitotic sister chromatid cohesion" evidence=IGI;IMP;IPI]
[GO:0032508 "DNA duplex unwinding" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0036297 "interstrand cross-link repair" evidence=IGI]
[GO:0045910 "negative regulation of DNA recombination"
evidence=IGI;IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=IEA] [GO:0007535 "donor selection"
evidence=IGI;IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] InterPro:IPR002464 InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
InterPro:IPR027076 Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 SGD:S000005929
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006270 EMBL:Z71255 EMBL:BK006949 GO:GO:0004003 EMBL:Z48483
EMBL:U33335 GO:GO:0003678 GO:GO:0007064 GO:GO:0045910
eggNOG:COG1199 KO:K11273 PANTHER:PTHR11472:SF5 TIGRFAMs:TIGR00604
HOGENOM:HOG000241266 OMA:NLGRCVV OrthoDB:EOG408RH6 EMBL:X56584
PIR:S12499 RefSeq:NP_015317.1 ProteinModelPortal:P22516 SMR:P22516
DIP:DIP-4044N IntAct:P22516 MINT:MINT-526050 STRING:P22516
PaxDb:P22516 PeptideAtlas:P22516 EnsemblFungi:YPL008W GeneID:856099
KEGG:sce:YPL008W CYGD:YPL008w GeneTree:ENSGT00530000063199
NextBio:981143 Genevestigator:P22516 GermOnline:YPL008W
GO:GO:0007535 GO:GO:0036297 Uniprot:P22516
Length = 861
Score = 363 (132.8 bits), Expect = 5.5e-30, P = 5.5e-30
Identities = 99/259 (38%), Positives = 138/259 (53%)
Query: 430 KPSEGGIEEAP-SQVQEDQVRN-PMLSVVT-FLESLVNKNEDGRILVTKNPELSKSHIKY 486
K E E P + + V + P+L V+ FL L N +G+ KN IKY
Sbjct: 506 KEEESSKNENPIKETHKKSVSSQPLLFKVSQFLYCLTNLTSEGQFFFEKNYS-----IKY 560
Query: 487 ILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKEN 546
+LL P+ F I+ A+ +++AGGTMEP+SEF L VP I SC HVIPKEN
Sbjct: 561 MLLEPSKPFESILNQAKCVVLAGGTMEPMSEFLSNLLPE--VPSEDITTLSCNHVIPKEN 618
Query: 547 ILPLILCSGPTNR-KFDLTFENRTKGDTLKE-IAMTITNLCTIVPK--GMVCFFPSYDYE 602
+ I TN+ + + TFE R + + +L VPK G+V FFPSY Y
Sbjct: 619 LQTYI-----TNQPELEFTFEKRMSPSLVNNHLFQFFVDLSKAVPKKGGIVAFFPSYQYL 673
Query: 603 AIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDYGTSVEKG-GALMLSVIGG 661
A V + N +R A + + +F E K + D +LS Y SV +G G+L+L+++GG
Sbjct: 674 AHVIQCWKQN---DRFATLNNVRKIFYEAK---DGDDILSGYSDSVAEGRGSLLLAIVGG 727
Query: 662 KLSEGLNFSDDLGRCVVVM 680
KLSEG+NF DDL R VV++
Sbjct: 728 KLSEGINFQDDLCRAVVMV 746
Score = 233 (87.1 bits), Expect = 9.2e-16, P = 9.2e-16
Identities = 68/183 (37%), Positives = 91/183 (49%)
Query: 220 KPPEGGIEEAP-SQVQEDQVRN-PMLSVVT-FLESLVNKNEDGRILVTKNPELSKSHIKY 276
K E E P + + V + P+L V+ FL L N +G+ KN IKY
Sbjct: 506 KEEESSKNENPIKETHKKSVSSQPLLFKVSQFLYCLTNLTSEGQFFFEKNYS-----IKY 560
Query: 277 ILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKEN 336
+LL P+ F I+ A+ +++AGGTMEP+SEF L VP I SC HVIPKEN
Sbjct: 561 MLLEPSKPFESILNQAKCVVLAGGTMEPMSEFLSNLLPE--VPSEDITTLSCNHVIPKEN 618
Query: 337 ILPLILCSGPTNR-KFDLTFENRTKGDTLKE-IAMTITNLCTIVPK--GMVCFFPSYDYE 392
+ I TN+ + + TFE R + + +L VPK G+V FFPSY Y
Sbjct: 619 LQTYI-----TNQPELEFTFEKRMSPSLVNNHLFQFFVDLSKAVPKKGGIVAFFPSYQYL 673
Query: 393 AIV 395
A V
Sbjct: 674 AHV 676
>POMBASE|SPAC3G6.11 [details] [associations]
symbol:chl1 "ATP-dependent DNA helicase Chl1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IC] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=NAS] [GO:0007064 "mitotic sister
chromatid cohesion" evidence=ISO] [GO:0032508 "DNA duplex
unwinding" evidence=IEA] [GO:0045910 "negative regulation of DNA
recombination" evidence=ISO] InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 InterPro:IPR027076
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 PomBase:SPAC3G6.11 INTERPRO:IPR013020 GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0000790 GO:GO:0004003 GO:GO:0006342 GO:GO:0007064
GO:GO:0045910 eggNOG:COG1199 KO:K11273 PANTHER:PTHR11472:SF5
TIGRFAMs:TIGR00604 PIR:T38730 RefSeq:NP_594977.1
ProteinModelPortal:O14147 STRING:O14147 EnsemblFungi:SPAC3G6.11.1
GeneID:2543118 KEGG:spo:SPAC3G6.11 HOGENOM:HOG000241266 OMA:NLGRCVV
OrthoDB:EOG408RH6 NextBio:20804145 Uniprot:O14147
Length = 844
Score = 361 (132.1 bits), Expect = 1.3e-29, Sum P(2) = 1.3e-29
Identities = 81/240 (33%), Positives = 130/240 (54%)
Query: 444 QEDQVRNPMLSVVTFLESLVNKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDAR 503
+ED ++ + +FL ++ N +G++ K ++KY+LL+P+ H + + R
Sbjct: 502 EEDPYTPVLMQLESFLLNIANPAPEGKLFYEKQTG-DNPYLKYLLLDPSKHVEILTEQCR 560
Query: 504 SIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDL 563
S+ +AGGTM P+ +F LF +SRI FSC H++P ENI +++ GP F+
Sbjct: 561 SVNLAGGTMSPIDDFITLLFSD---EQSRILPFSCDHIVPPENITTILVSQGPAGVPFEF 617
Query: 564 TFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYEAIVYNYMRDNHFIERIARIAK 623
T + + + LK++ T N +I+P G+V FFPS+ + N R+
Sbjct: 618 THKRKDDENLLKDLGRTFQNFISIIPDGVVVFFPSFAFLQQAVKVWEMNGITNRLNA--- 674
Query: 624 KKVVFREPKKTSE--VDKVLSDYGTSVEKG-GALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
KK +F E K + +D Y SV+ G ++ SVIGG+LSEG+NFSD LGR V+V+
Sbjct: 675 KKPLFIESKDFGDNPLD-TFEHYKQSVDAGLSGMLFSVIGGRLSEGINFSDKLGRAVMVV 733
Score = 267 (99.0 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 51/158 (32%), Positives = 89/158 (56%)
Query: 234 QEDQVRNPMLSVVTFLESLVNKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQDAR 293
+ED ++ + +FL ++ N +G++ K ++KY+LL+P+ H + + R
Sbjct: 502 EEDPYTPVLMQLESFLLNIANPAPEGKLFYEKQTG-DNPYLKYLLLDPSKHVEILTEQCR 560
Query: 294 SIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDL 353
S+ +AGGTM P+ +F LF +SRI FSC H++P ENI +++ GP F+
Sbjct: 561 SVNLAGGTMSPIDDFITLLFSD---EQSRILPFSCDHIVPPENITTILVSQGPAGVPFEF 617
Query: 354 TFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDY 391
T + + + LK++ T N +I+P G+V FFPS+ +
Sbjct: 618 THKRKDDENLLKDLGRTFQNFISIIPDGVVVFFPSFAF 655
Score = 45 (20.9 bits), Expect = 1.3e-29, Sum P(2) = 1.3e-29
Identities = 23/112 (20%), Positives = 47/112 (41%)
Query: 213 ENNPNLS-KPPEGGIEEAPSQVQEDQVRNPMLSVVTFLESLVNKNEDGRILVTKNPELSK 271
+N N S K P+ +E+ ++Q+D V+ + LE + +N+ + ++ N
Sbjct: 78 DNKSNTSSKIPDWVLEQ-DLKIQKDLVKETHARLEQRLEEIRKRNQSRKNQMSNNSTTYH 136
Query: 272 SHIKYILLNPANHFTDIVQDARS--------IIVAGGTMEPVSEFKDQLFGS 315
K +N +D ++ + ++ A TM SE + LF +
Sbjct: 137 RETKRRNINAEASTSDNCNNSNTSVDPMDEYLVTAEYTMPSTSEQSEDLFNN 188
Score = 37 (18.1 bits), Expect = 9.2e-29, Sum P(2) = 9.2e-29
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 248 FLESLVNKNEDGRILVTKNP 267
F+ SL + DG+I + ++P
Sbjct: 26 FMRSLYSSISDGKIGIFESP 45
>DICTYBASE|DDB_G0274159 [details] [associations]
symbol:hisS "histidine-tRNA ligase" species:44689
"Dictyostelium discoideum" [GO:0006427 "histidyl-tRNA
aminoacylation" evidence=IEA;ISS] [GO:0006418 "tRNA aminoacylation
for protein translation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004821
"histidine-tRNA ligase activity" evidence=IEA;ISS] [GO:0004812
"aminoacyl-tRNA ligase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR004516 InterPro:IPR006195 InterPro:IPR015807
PIRSF:PIRSF001549 PROSITE:PS50862 InterPro:IPR004154
dictyBase:DDB_G0274159 GO:GO:0005524 GO:GO:0005737
GenomeReviews:CM000151_GR EMBL:AAFI02000012 SUPFAM:SSF52954
Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476 eggNOG:COG0124
KO:K01892 GO:GO:0004821 GO:GO:0006427 TIGRFAMs:TIGR00442
OMA:RGERAQK RefSeq:XP_644303.1 ProteinModelPortal:Q86AS6
STRING:Q86AS6 PRIDE:Q86AS6 EnsemblProtists:DDB0231332
GeneID:8619731 KEGG:ddi:DDB_G0274159 ProtClustDB:CLSZ2431052
Uniprot:Q86AS6
Length = 481
Score = 264 (98.0 bits), Expect = 3.8e-27, Sum P(2) = 3.8e-27
Identities = 63/135 (46%), Positives = 84/135 (62%)
Query: 1 MVGEKNLSPEVADKIGEYV-LKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQI 59
MV K L VADKI ++V LK + L+++L A +K A E L ++ LF Y +
Sbjct: 236 MVEVKALDGAVADKIEKFVSLKDEPIKLLQHLRATGMCDGNKDATEALSQLETLFGYLEC 295
Query: 60 YGLKDTIVFDLSLARGLDYYTGVIYEAVLKDQ-AVGSVAGGGRYDNLVGMFDPKNKTTPC 118
+G+ I+FDLSLARGLDYYTG+IYEAVL Q VGS+A GGRYD LVGM+ K+ P
Sbjct: 296 FGVTQHILFDLSLARGLDYYTGIIYEAVLTGQDRVGSIAAGGRYDGLVGMYGKKD--VPA 353
Query: 119 VAAKL-LHEVQGLLE 132
V + + + +LE
Sbjct: 354 VGFSIGIERIFTILE 368
Score = 114 (45.2 bits), Expect = 3.8e-27, Sum P(2) = 3.8e-27
Identities = 24/76 (31%), Positives = 46/76 (60%)
Query: 142 IGVERLFSIIENRNAEQGVKVKTTSTQVYVASAQKNLVEPRMQLCHELW-GGEKTQEKPK 200
IG+ER+F+I+E+ ++ K++ +TQV+V +K+L++ R+ + ELW G + K
Sbjct: 358 IGIERIFTILEDEYKKENKKIRENATQVFVVQMEKDLIKERLAIVSELWKAGINAEFSYK 417
Query: 201 LSG-LQSFLKGVQENN 215
++ L + L E+N
Sbjct: 418 VNPKLPAQLNTADESN 433
>TAIR|locus:2075472 [details] [associations]
symbol:AT3G02760 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004812
"aminoacyl-tRNA ligase activity" evidence=IEA] [GO:0004821
"histidine-tRNA ligase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006418 "tRNA aminoacylation for protein translation"
evidence=IEA] [GO:0006427 "histidyl-tRNA aminoacylation"
evidence=IEA;ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0048481
"ovule development" evidence=RCA] InterPro:IPR004516
InterPro:IPR006195 InterPro:IPR015807 PROSITE:PS50862
InterPro:IPR004154 HAMAP:MF_00127 GO:GO:0005829 GO:GO:0005524
EMBL:CP002686 SUPFAM:SSF52954 Gene3D:3.40.50.800 Pfam:PF03129
PANTHER:PTHR11476 KO:K01892 GO:GO:0004821 GO:GO:0006427
TIGRFAMs:TIGR00442 IPI:IPI00521766 RefSeq:NP_186925.4
UniGene:At.43888 UniGene:At.69029 ProteinModelPortal:F4IYF8
SMR:F4IYF8 PRIDE:F4IYF8 EnsemblPlants:AT3G02760.1 GeneID:820930
KEGG:ath:AT3G02760 OMA:ICVENEN ArrayExpress:F4IYF8 Uniprot:F4IYF8
Length = 883
Score = 263 (97.6 bits), Expect = 5.2e-19, P = 5.2e-19
Identities = 68/165 (41%), Positives = 98/165 (59%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGH-VDLVENLLAD--EFLAKSKQAKEGLEAIKLLFHYC 57
MV EK LS E+AD+IG +V + G ++L+ L + EFL ++ ++E L+ + ++F
Sbjct: 641 MVEEKGLSSEIADRIGNFVKEKGAPLELLSKLRQEGSEFL-DNQSSREALDELSIMFEAL 699
Query: 58 QIYGLKDTIVFDLSLARGLDYYTGVIYEAVLKDQAVGSVAGGGRYDNLVGMFDPKNKTTP 117
+ + IVFDLSLARGLDYYTGVI+EAV VGS+ GGRYDNL+GMF K P
Sbjct: 700 KRSKCSERIVFDLSLARGLDYYTGVIFEAVCIGAEVGSIGAGGRYDNLIGMFGTKQ--VP 757
Query: 118 CVAAKL-LHEVQGLLETSCRSCREDIG---VERLFSI-IENRNAE 157
V L + V ++E ++ I + L SI ++N+ AE
Sbjct: 758 AVGMSLGIERVFNIMEELNEKQKQVIRPTETQVLVSIMVDNKLAE 802
>GENEDB_PFALCIPARUM|MAL13P1.134 [details] [associations]
symbol:MAL13P1.134 "helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0016020 "membrane"
evidence=ISS] InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 InterPro:IPR027076
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 GO:GO:0005524 GO:GO:0016020 GO:GO:0003677
GO:GO:0004003 EMBL:AL844509 KO:K11273 PANTHER:PTHR11472:SF5
RefSeq:XP_001349985.1 ProteinModelPortal:Q8IE72
EnsemblProtists:MAL13P1.134:mRNA GeneID:813685 KEGG:pfa:MAL13P1.134
EuPathDB:PlasmoDB:PF3D7_1324500 HOGENOM:HOG000281821
ProtClustDB:CLSZ2500734 Uniprot:Q8IE72
Length = 1099
Score = 260 (96.6 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 74/221 (33%), Positives = 119/221 (53%)
Query: 473 VTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESR 532
V K +L + I+ I ++ N+F I +D ++I+ GGT+ P+ EF LF L +++
Sbjct: 711 VKKRKDLF-NEIEVISVSSCNNFQSITKDCSNVILIGGTLYPMEEFL-LLF--LNYNKNK 766
Query: 533 IHHFSCGHVIPKENILPLILCSGPTNRKF-DLTFENRTKGDTLKEIAMTITNLCTIVPKG 591
I FS ++ K+NI I + + F D T++NR K D L +A+ I + + G
Sbjct: 767 IKLFSSDYIFKKQNIFARIFSTNLISSDFIDNTYKNRLKKDHLLNLAIYIYMITFNILYG 826
Query: 592 MVCFFPSYDYEAIVYNYM-RDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDYGTSVE- 649
+ FFPSY++ YN++ ++ +I RI KKK VF E K D ++ +Y ++E
Sbjct: 827 NIIFFPSYNFLNDFYNFLNKEGEYI--FNRIKKKKFVFFEKKND---DTIVKNYMNNIEN 881
Query: 650 ----------KGGALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
+ G ++ V+ GKLSEG+NF DDL R VVV+
Sbjct: 882 IKNIDPNLRIQNGCILFCVMNGKLSEGINFYDDLCRNVVVV 922
Score = 168 (64.2 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 44/138 (31%), Positives = 75/138 (54%)
Query: 263 VTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESR 322
V K +L + I+ I ++ N+F I +D ++I+ GGT+ P+ EF LF L +++
Sbjct: 711 VKKRKDLF-NEIEVISVSSCNNFQSITKDCSNVILIGGTLYPMEEFL-LLF--LNYNKNK 766
Query: 323 IHHFSCGHVIPKENILPLILCSGPTNRKF-DLTFENRTKGDTLKEIAMTITNLCTIVPKG 381
I FS ++ K+NI I + + F D T++NR K D L +A+ I + + G
Sbjct: 767 IKLFSSDYIFKKQNIFARIFSTNLISSDFIDNTYKNRLKKDHLLNLAIYIYMITFNILYG 826
Query: 382 MVCFFPSYDYEAIVYNYM 399
+ FFPSY++ YN++
Sbjct: 827 NIIFFPSYNFLNDFYNFL 844
>UNIPROTKB|Q8IE72 [details] [associations]
symbol:MAL13P1.134 "DEAD box helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0016020 "membrane"
evidence=ISS] InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 InterPro:IPR027076
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 GO:GO:0005524 GO:GO:0016020 GO:GO:0003677
GO:GO:0004003 EMBL:AL844509 KO:K11273 PANTHER:PTHR11472:SF5
RefSeq:XP_001349985.1 ProteinModelPortal:Q8IE72
EnsemblProtists:MAL13P1.134:mRNA GeneID:813685 KEGG:pfa:MAL13P1.134
EuPathDB:PlasmoDB:PF3D7_1324500 HOGENOM:HOG000281821
ProtClustDB:CLSZ2500734 Uniprot:Q8IE72
Length = 1099
Score = 260 (96.6 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 74/221 (33%), Positives = 119/221 (53%)
Query: 473 VTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESR 532
V K +L + I+ I ++ N+F I +D ++I+ GGT+ P+ EF LF L +++
Sbjct: 711 VKKRKDLF-NEIEVISVSSCNNFQSITKDCSNVILIGGTLYPMEEFL-LLF--LNYNKNK 766
Query: 533 IHHFSCGHVIPKENILPLILCSGPTNRKF-DLTFENRTKGDTLKEIAMTITNLCTIVPKG 591
I FS ++ K+NI I + + F D T++NR K D L +A+ I + + G
Sbjct: 767 IKLFSSDYIFKKQNIFARIFSTNLISSDFIDNTYKNRLKKDHLLNLAIYIYMITFNILYG 826
Query: 592 MVCFFPSYDYEAIVYNYM-RDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDYGTSVE- 649
+ FFPSY++ YN++ ++ +I RI KKK VF E K D ++ +Y ++E
Sbjct: 827 NIIFFPSYNFLNDFYNFLNKEGEYI--FNRIKKKKFVFFEKKND---DTIVKNYMNNIEN 881
Query: 650 ----------KGGALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
+ G ++ V+ GKLSEG+NF DDL R VVV+
Sbjct: 882 IKNIDPNLRIQNGCILFCVMNGKLSEGINFYDDLCRNVVVV 922
Score = 168 (64.2 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 44/138 (31%), Positives = 75/138 (54%)
Query: 263 VTKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESR 322
V K +L + I+ I ++ N+F I +D ++I+ GGT+ P+ EF LF L +++
Sbjct: 711 VKKRKDLF-NEIEVISVSSCNNFQSITKDCSNVILIGGTLYPMEEFL-LLF--LNYNKNK 766
Query: 323 IHHFSCGHVIPKENILPLILCSGPTNRKF-DLTFENRTKGDTLKEIAMTITNLCTIVPKG 381
I FS ++ K+NI I + + F D T++NR K D L +A+ I + + G
Sbjct: 767 IKLFSSDYIFKKQNIFARIFSTNLISSDFIDNTYKNRLKKDHLLNLAIYIYMITFNILYG 826
Query: 382 MVCFFPSYDYEAIVYNYM 399
+ FFPSY++ YN++
Sbjct: 827 NIIFFPSYNFLNDFYNFL 844
>ASPGD|ASPL0000062762 [details] [associations]
symbol:AN0046 species:162425 "Emericella nidulans"
[GO:0004821 "histidine-tRNA ligase activity" evidence=RCA]
[GO:0006418 "tRNA aminoacylation for protein translation"
evidence=RCA] [GO:0005622 "intracellular" evidence=IDA] [GO:0005829
"cytosol" evidence=IEA] [GO:0006427 "histidyl-tRNA aminoacylation"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR004516 InterPro:IPR006195 InterPro:IPR015807
PIRSF:PIRSF001549 PROSITE:PS50862 InterPro:IPR004154 HAMAP:MF_00127
GO:GO:0005524 GO:GO:0005737 EMBL:BN001308 SUPFAM:SSF52954
Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476 GO:GO:0004821
GO:GO:0006427 TIGRFAMs:TIGR00442 HOGENOM:HOG000018075 OMA:RGERAQK
EnsemblFungi:CADANIAT00002709 Uniprot:C8VRD6
Length = 549
Score = 252 (93.8 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 71/214 (33%), Positives = 115/214 (53%)
Query: 4 EKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIYGLK 63
EK L+PEVADK+G+YV G D+++ + +D+ L+ ++ +G+E ++LLF Y + + +
Sbjct: 268 EKGLAPEVADKVGQYVKLSGGRDILDTIRSDDLLSTNENVMKGVEDMELLFKYLEAFDVL 327
Query: 64 DTIVFDLSLARGLDYYTGVIYEAVLKDQAVGSVAGGGRYDNLVGMFDPKNKTTPCVAAKL 123
D I FDLSLARGLDYYTG+IYE V + A + + +N +AA
Sbjct: 328 DKISFDLSLARGLDYYTGLIYEVVTPLSSAEGFAQSQKKSKSKSNGEDQNIGVGSIAAGG 387
Query: 124 LHE--VQGLLETSCRSCRE-DIGVERLFSIIENR---NAEQG-VKVKTTSTQVYV-ASAQ 175
++ V + C GV+R+F+I++ R A++G ++ + V+V A
Sbjct: 388 RYDDLVNMFAKKRQIPCVGISFGVDRIFTIMKQRLENEAKEGNASMRASEVDVFVMAFGG 447
Query: 176 KN---LVEPRMQLCHELW-GGEKTQ----EKPKL 201
K L+ RM + ++LW G K + KPKL
Sbjct: 448 KGFNGLLLERMSVANQLWKAGIKAEFAQTVKPKL 481
>POMBASE|SPBC2G2.12 [details] [associations]
symbol:hrs1 "mitochondrial and cytoplasmic histidine-tRNA
ligase Hrs1 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0002181 "cytoplasmic translation" evidence=ISO] [GO:0004821
"histidine-tRNA ligase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=ISS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006427 "histidyl-tRNA aminoacylation"
evidence=ISS] [GO:0032543 "mitochondrial translation" evidence=ISO]
InterPro:IPR000738 InterPro:IPR004516 InterPro:IPR006195
InterPro:IPR015807 Pfam:PF00458 PROSITE:PS00762 PROSITE:PS50862
PROSITE:PS51185 SMART:SM00991 PomBase:SPBC2G2.12 InterPro:IPR004154
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0032543 GO:GO:0002181
SUPFAM:SSF52954 Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476
eggNOG:COG0124 Gene3D:1.10.287.10 InterPro:IPR009068
SUPFAM:SSF47060 GO:GO:0004821 GO:GO:0006427 TIGRFAMs:TIGR00442
HOGENOM:HOG000018075 PIR:T40151 RefSeq:NP_596441.2 HSSP:P23381
STRING:O43011 PRIDE:O43011 GeneID:2540472 OrthoDB:EOG4JQ75X
NextBio:20801599 Uniprot:O43011
Length = 563
Score = 249 (92.7 bits), Expect = 7.2e-18, P = 7.2e-18
Identities = 68/208 (32%), Positives = 105/208 (50%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIY 60
MV EK L EVADKI EYVL G L++ L AD L+ + A ++LLF Y + +
Sbjct: 286 MVVEKGLKEEVADKIKEYVLLKGDRSLLDKLEADSLLSSNSSAVAAFNDMRLLFDYLEAF 345
Query: 61 GLKDTIVFDLSLARGLDYYTGVIYEAVLKDQAVGSVAGGGRYDNLVGMFDPKNKTT---P 117
G+ D FD+SLARGLDYYTG+IYEAV + A + + + D N +
Sbjct: 346 GVLDRFSFDMSLARGLDYYTGIIYEAVTEASAPKIKSSAEKKKSADPEADRSNDDSIGVG 405
Query: 118 CVAAKLLHE-VQGLLETSCRS---CRE-DIGVERLFSIIENRNAEQGVKVKTTSTQVYVA 172
+AA ++ + G+ + C +G+ER+FSI+ ++ ++ ++ V
Sbjct: 406 SIAAGGRYDNLVGMFAAKKNAKIPCVGISLGLERIFSILRSKIPDEDIRANDVDVFVMAF 465
Query: 173 SAQKN---LVEPRMQLCHELWG-GEKTQ 196
K ++ RM +C +LW G K +
Sbjct: 466 GGGKEWTGFLKERMSVCKDLWANGIKAE 493
>WB|WBGene00002001 [details] [associations]
symbol:hars-1 species:6239 "Caenorhabditis elegans"
[GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0006427
"histidyl-tRNA aminoacylation" evidence=IEA;ISS] [GO:0004821
"histidine-tRNA ligase activity" evidence=IEA;ISS] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004812 "aminoacyl-tRNA
ligase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006418 "tRNA aminoacylation for protein
translation" evidence=IEA] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0005739 "mitochondrion" evidence=ISS] [GO:0007281
"germ cell development" evidence=IMP] InterPro:IPR004516
InterPro:IPR006195 InterPro:IPR015807 PIRSF:PIRSF001549
PROSITE:PS50862 InterPro:IPR004154 GO:GO:0005739 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0040018 GO:GO:0007281 SUPFAM:SSF52954
Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476 eggNOG:COG0124
GO:GO:0004821 GO:GO:0006427 TIGRFAMs:TIGR00442
GeneTree:ENSGT00390000005922 HOGENOM:HOG000018075 OMA:RGERAQK
BRENDA:6.1.1.21 EMBL:L13152 EMBL:S68230 EMBL:Z69384 PIR:S41763
PIR:T24848 RefSeq:NP_001023373.2 RefSeq:NP_001023374.1
ProteinModelPortal:P34183 SMR:P34183 DIP:DIP-25741N
MINT:MINT-1044753 STRING:P34183 PaxDb:P34183 PRIDE:P34183
EnsemblMetazoa:T11G6.1b.1 EnsemblMetazoa:T11G6.1b.2 GeneID:177978
KEGG:cel:CELE_T11G6.1 UCSC:T11G6.1a.1 CTD:177978 WormBase:T11G6.1a
WormBase:T11G6.1b InParanoid:P34183 NextBio:899208 Uniprot:P34183
Length = 521
Score = 241 (89.9 bits), Expect = 4.5e-17, P = 4.5e-17
Identities = 73/206 (35%), Positives = 106/206 (51%)
Query: 1 MVGEKNLSPEVADKIGEYV----LKH--GHVDLVENLLADEFLAKSKQAKEGLEAIKLLF 54
M+ EK L+ E K+GE V L +++L+E + L ++ + K+G E +K+L
Sbjct: 260 MINEKFLTKEQTGKLGELVRFRELNSDLNNLELLEKMSQLPDLGQNDKFKKGAEELKVLI 319
Query: 55 HYCQIYGLKDTIVFDLSLARGLDYYTGVIYEAVLKDQAVGSVAGGGRYDNLVGMFDPKNK 114
Y + G+ T+ ++ SLARGLDYYTG IYEAV G+ ++ G P
Sbjct: 320 EYLNVDGVT-TVRYEPSLARGLDYYTGAIYEAVAPKALEGTAVENS--EDTAGQ--PVGV 374
Query: 115 TTPCVAAK---LLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYV 171
+ + L+ C C G+ERLF+I+E A Q V ++TT T+VYV
Sbjct: 375 GSVAAGGRYDGLVKMFDSKANVPC--CGVSFGIERLFAIME---ARQKVAIRTTQTEVYV 429
Query: 172 ASAQKNLVEPRMQLCHELWG-GEKTQ 196
ASAQKNLV R +L L G KT+
Sbjct: 430 ASAQKNLVRDRKKLVKMLRSAGIKTE 455
>MGI|MGI:2442836 [details] [associations]
symbol:Brip1 "BRCA1 interacting protein C-terminal helicase
1" species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051536 "iron-sulfur cluster binding" evidence=IEA] [GO:0051539
"4 iron, 4 sulfur cluster binding" evidence=IEA] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 MGI:MGI:2442836
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0003677 GO:GO:0006281 GO:GO:0006357
GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
CleanEx:MM_BACH1 eggNOG:COG1199 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 CTD:83990 HOGENOM:HOG000068083
HOVERGEN:HBG081519 KO:K15362 OrthoDB:EOG4J6RQ8 EMBL:AL592465
EMBL:AL592065 EMBL:AL645690 EMBL:BC094252 EMBL:AK051878
EMBL:AK080771 IPI:IPI00319607 RefSeq:NP_840094.1 UniGene:Mm.186143
ProteinModelPortal:Q5SXJ3 SMR:Q5SXJ3 STRING:Q5SXJ3
PhosphoSite:Q5SXJ3 PRIDE:Q5SXJ3 Ensembl:ENSMUST00000044423
GeneID:237911 KEGG:mmu:237911 UCSC:uc007ksf.2 InParanoid:Q5SXJ3
OMA:GVHKISD ChiTaRS:BRIP1 NextBio:383570 Bgee:Q5SXJ3
CleanEx:MM_BRIP1 Genevestigator:Q5SXJ3
GermOnline:ENSMUSG00000034329 Uniprot:Q5SXJ3
Length = 1174
Score = 241 (89.9 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 68/227 (29%), Positives = 113/227 (49%)
Query: 466 NEDGRILVTKNPELSKSHI-----KYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKD 520
++ G + V KN + S+ I + LNPA F+DI R+I++ GT+ P+ F
Sbjct: 569 DKTGVLAVPKNKKHSRQKIGVNALNFWCLNPAVAFSDINDKVRTIVLTSGTLSPLKSFSS 628
Query: 521 QLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMT 580
+L GV S HVI + + SGP R TF++ + E+ M
Sbjct: 629 EL----GVTFSI--QLEANHVISNSQVWVGTVGSGPKGRNLCATFQHTETFEFQDEVGML 682
Query: 581 ITNLCTIVPKGMVCFFPSYDYEAIVYNYMRDNHFIERIAR-IAKKKVVFREPK--KTSEV 637
+ ++C V +G++CF PSY + +R+ + + K V EP+ + ++
Sbjct: 683 LLSVCQTVSQGILCFLPSYK----LLEKLRERWIFTGLWHSLESVKTVIAEPQGGEKTDF 738
Query: 638 DKVLSDYGTSV----EKGGALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
D++L Y ++ EK GAL+++V GK+SEGL+FSDD R V+ +
Sbjct: 739 DELLQVYYDAIKFKGEKDGALLIAVCRGKVSEGLDFSDDNARAVITV 785
Score = 160 (61.4 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 42/139 (30%), Positives = 67/139 (48%)
Query: 256 NEDGRILVTKNPELSKSHI-----KYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKD 310
++ G + V KN + S+ I + LNPA F+DI R+I++ GT+ P+ F
Sbjct: 569 DKTGVLAVPKNKKHSRQKIGVNALNFWCLNPAVAFSDINDKVRTIVLTSGTLSPLKSFSS 628
Query: 311 QLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMT 370
+L GV S HVI + + SGP R TF++ + E+ M
Sbjct: 629 EL----GVTFSI--QLEANHVISNSQVWVGTVGSGPKGRNLCATFQHTETFEFQDEVGML 682
Query: 371 ITNLCTIVPKGMVCFFPSY 389
+ ++C V +G++CF PSY
Sbjct: 683 LLSVCQTVSQGILCFLPSY 701
>SGD|S000006237 [details] [associations]
symbol:HTS1 "Cytoplasmic and mitochondrial histidine tRNA
synthetase" species:4932 "Saccharomyces cerevisiae" [GO:0006427
"histidyl-tRNA aminoacylation" evidence=IEA;IDA;IMP] [GO:0005739
"mitochondrion" evidence=IEA;IMP] [GO:0004812 "aminoacyl-tRNA
ligase activity" evidence=IEA;IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IMP] [GO:0006412
"translation" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0032543 "mitochondrial translation" evidence=IGI]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004821
"histidine-tRNA ligase activity" evidence=IEA] [GO:0006418 "tRNA
aminoacylation for protein translation" evidence=IEA]
InterPro:IPR002314 InterPro:IPR004516 InterPro:IPR006195
InterPro:IPR015807 Pfam:PF00587 PIRSF:PIRSF001549 PROSITE:PS50862
InterPro:IPR004154 SGD:S000006237 GO:GO:0005739 GO:GO:0005524
EMBL:Z71255 EMBL:BK006949 GO:GO:0032543 EMBL:Z49274 GO:GO:0004812
SUPFAM:SSF52954 Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476
eggNOG:COG0124 KO:K01892 GO:GO:0004821 GO:GO:0006427
TIGRFAMs:TIGR00442 GeneTree:ENSGT00390000005922
HOGENOM:HOG000018075 OMA:RGERAQK BRENDA:6.1.1.21 OrthoDB:EOG4JQ75X
EMBL:M14048 EMBL:AY692751 PIR:S54507 RefSeq:NP_015358.1
ProteinModelPortal:P07263 SMR:P07263 DIP:DIP-3909N IntAct:P07263
MINT:MINT-487669 STRING:P07263 PaxDb:P07263 PeptideAtlas:P07263
PRIDE:P07263 EnsemblFungi:YPR033C GeneID:856145 KEGG:sce:YPR033C
CYGD:YPR033c NextBio:981265 Genevestigator:P07263
GermOnline:YPR033C Uniprot:P07263
Length = 546
Score = 230 (86.0 bits), Expect = 8.3e-16, P = 8.3e-16
Identities = 72/208 (34%), Positives = 102/208 (49%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVDLVENLL-ADEFLAKSKQAKEGLEAIKLLFHYCQI 59
M EK S E ADKIGEYV +G + + +L AD + +++AK+GL+ I L Y +
Sbjct: 252 MTEEKGQSEETADKIGEYVKLNGSLKEIHAVLSADANITSNEKAKQGLDDIATLMKYTEA 311
Query: 60 YGLKDTIVFDLSLARGLDYYTGVIYEAV------------LKDQAVGSVAGGGRYDNLVG 107
+ + I FDLSLARGLDYYTG+IYE V LK +A S + VG
Sbjct: 312 FDIDSFISFDLSLARGLDYYTGLIYEVVTSASAPPENASELKKKAK-SAEDASEFVG-VG 369
Query: 108 MFDPKNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTST 167
+ V + E G T GVER+FS+I+ R +K T+T
Sbjct: 370 SIAAGGRYDNLV--NMFSEASGKKSTQIPCVGISFGVERIFSLIKQR-INSSTTIKPTAT 426
Query: 168 QVYVAS--AQKN---LVEPRMQLCHELW 190
QV+V + K+ + RM++ +LW
Sbjct: 427 QVFVMAFGGGKDWTGYLPERMKVTKQLW 454
>UNIPROTKB|J3QSE8 [details] [associations]
symbol:BRIP1 "Fanconi anemia group J protein" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00491
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004003 InterPro:IPR014001 SMART:SM00487 TIGRFAMs:TIGR00604
EMBL:AC002994 EMBL:AC005969 EMBL:AC060798 HGNC:HGNC:20473
ProteinModelPortal:J3QSE8 Ensembl:ENST00000577598 Uniprot:J3QSE8
Length = 994
Score = 231 (86.4 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 66/229 (28%), Positives = 116/229 (50%)
Query: 466 NEDGRILVTKNPELSKS----HI-KYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKD 520
+++G +++ KN + S+ H+ + LNPA F+DI ++I++ GT+ P+ F
Sbjct: 566 DKNGLLVLPKNKKRSRQKTAVHVLNFWCLNPAVAFSDINGKVQTIVLTSGTLSPMKSFSS 625
Query: 521 QLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMT 580
+L GV + H+I + + SGP R TF+N + E+
Sbjct: 626 EL----GVTFTI--QLEANHIIKNSQVWVGTIGSGPKGRNLCATFQNTETFEFQDEVGAL 679
Query: 581 ITNLCTIVPKGMVCFFPSYDY-EAIVYNYMRDN--HFIERIARIAKKKVVFREPK--KTS 635
+ ++C V +G++CF PSY E + ++ H +E + K V EP+ + +
Sbjct: 680 LLSVCQTVSQGILCFLPSYKLLEKLKERWLSTGLWHNLELV------KTVIVEPQGGEKT 733
Query: 636 EVDKVLSDYGTSV----EKGGALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
D++L Y ++ EK GAL+++V GK+SEGL+FSDD R V+ +
Sbjct: 734 NFDELLQVYYDAIKYKGEKDGALLVAVCRGKVSEGLDFSDDNARAVITI 782
Score = 154 (59.3 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 38/139 (27%), Positives = 69/139 (49%)
Query: 256 NEDGRILVTKNPELSKS----HI-KYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKD 310
+++G +++ KN + S+ H+ + LNPA F+DI ++I++ GT+ P+ F
Sbjct: 566 DKNGLLVLPKNKKRSRQKTAVHVLNFWCLNPAVAFSDINGKVQTIVLTSGTLSPMKSFSS 625
Query: 311 QLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMT 370
+L GV + H+I + + SGP R TF+N + E+
Sbjct: 626 EL----GVTFTI--QLEANHIIKNSQVWVGTIGSGPKGRNLCATFQNTETFEFQDEVGAL 679
Query: 371 ITNLCTIVPKGMVCFFPSY 389
+ ++C V +G++CF PSY
Sbjct: 680 LLSVCQTVSQGILCFLPSY 698
>UNIPROTKB|E1BTS7 [details] [associations]
symbol:Gga.49055 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004003 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 EMBL:AADN02019151 EMBL:AADN02019152
EMBL:AADN02019153 IPI:IPI00819960 Ensembl:ENSGALT00000039433
ArrayExpress:E1BTS7 Uniprot:E1BTS7
Length = 1085
Score = 231 (86.4 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 62/200 (31%), Positives = 98/200 (49%)
Query: 484 IKYILLNPANHFTDIV-QDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 542
+ Y +P ++V Q R+II+ GT+ P+S F ++ +P + HVI
Sbjct: 455 LSYWCFSPGYSMHELVRQGVRTIILTSGTLSPLSSFTMEM----QIPFPVL--LENPHVI 508
Query: 543 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYE 602
K + I+ GP + +E R D L + TI NL +VP G++ FFPSY
Sbjct: 509 DKRQLWVGIIPKGPDGTVLNSAYERRFSEDYLSSLGKTIGNLVRVVPHGLLVFFPSYPVM 568
Query: 603 AIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDYGTSV---EKGGALMLSVI 659
Y R++ F +RI + K +F EP+ +V+ Y + + + GA L+V
Sbjct: 569 DKSLEYWREHDFAKRIEEV---KPMFVEPRNKGSFAEVMDAYYSKIACPKSNGAAFLAVC 625
Query: 660 GGKLSEGLNFSDDLGRCVVV 679
GK SEGL+F+D GR V++
Sbjct: 626 RGKASEGLDFADMNGRGVII 645
Score = 139 (54.0 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 41/140 (29%), Positives = 65/140 (46%)
Query: 274 IKYILLNPANHFTDIV-QDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 332
+ Y +P ++V Q R+II+ GT+ P+S F ++ +P + HVI
Sbjct: 455 LSYWCFSPGYSMHELVRQGVRTIILTSGTLSPLSSFTMEM----QIPFPVL--LENPHVI 508
Query: 333 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDY- 391
K + I+ GP + +E R D L + TI NL +VP G++ FFPSY
Sbjct: 509 DKRQLWVGIIPKGPDGTVLNSAYERRFSEDYLSSLGKTIGNLVRVVPHGLLVFFPSYPVM 568
Query: 392 -EAIVYNYMPDIEKTQEKPK 410
+++ Y D K E+ K
Sbjct: 569 DKSLEYWREHDFAKRIEEVK 588
>UNIPROTKB|E1BTS6 [details] [associations]
symbol:Gga.49055 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004003 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 EMBL:AADN02019151 EMBL:AADN02019152
EMBL:AADN02019153 IPI:IPI00822587 Ensembl:ENSGALT00000039434
ArrayExpress:E1BTS6 Uniprot:E1BTS6
Length = 1124
Score = 231 (86.4 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 62/200 (31%), Positives = 98/200 (49%)
Query: 484 IKYILLNPANHFTDIV-QDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 542
+ Y +P ++V Q R+II+ GT+ P+S F ++ +P + HVI
Sbjct: 455 LSYWCFSPGYSMHELVRQGVRTIILTSGTLSPLSSFTMEM----QIPFPVL--LENPHVI 508
Query: 543 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYE 602
K + I+ GP + +E R D L + TI NL +VP G++ FFPSY
Sbjct: 509 DKRQLWVGIIPKGPDGTVLNSAYERRFSEDYLSSLGKTIGNLVRVVPHGLLVFFPSYPVM 568
Query: 603 AIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDYGTSV---EKGGALMLSVI 659
Y R++ F +RI + K +F EP+ +V+ Y + + + GA L+V
Sbjct: 569 DKSLEYWREHDFAKRIEEV---KPMFVEPRNKGSFAEVMDAYYSKIACPKSNGAAFLAVC 625
Query: 660 GGKLSEGLNFSDDLGRCVVV 679
GK SEGL+F+D GR V++
Sbjct: 626 RGKASEGLDFADMNGRGVII 645
Score = 139 (54.0 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 41/140 (29%), Positives = 65/140 (46%)
Query: 274 IKYILLNPANHFTDIV-QDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 332
+ Y +P ++V Q R+II+ GT+ P+S F ++ +P + HVI
Sbjct: 455 LSYWCFSPGYSMHELVRQGVRTIILTSGTLSPLSSFTMEM----QIPFPVL--LENPHVI 508
Query: 333 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDY- 391
K + I+ GP + +E R D L + TI NL +VP G++ FFPSY
Sbjct: 509 DKRQLWVGIIPKGPDGTVLNSAYERRFSEDYLSSLGKTIGNLVRVVPHGLLVFFPSYPVM 568
Query: 392 -EAIVYNYMPDIEKTQEKPK 410
+++ Y D K E+ K
Sbjct: 569 DKSLEYWREHDFAKRIEEVK 588
>UNIPROTKB|F1NE49 [details] [associations]
symbol:Gga.49055 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000723 "telomere maintenance"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004003 GO:GO:0000723
TIGRFAMs:TIGR00604 GeneTree:ENSGT00530000063199 OMA:VLKMQFL
EMBL:AADN02019151 EMBL:AADN02019152 EMBL:AADN02019153
IPI:IPI00597328 Ensembl:ENSGALT00000009881 ArrayExpress:F1NE49
Uniprot:F1NE49
Length = 1127
Score = 231 (86.4 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 62/200 (31%), Positives = 98/200 (49%)
Query: 484 IKYILLNPANHFTDIV-QDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 542
+ Y +P ++V Q R+II+ GT+ P+S F ++ +P + HVI
Sbjct: 457 LSYWCFSPGYSMHELVRQGVRTIILTSGTLSPLSSFTMEM----QIPFPVL--LENPHVI 510
Query: 543 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYE 602
K + I+ GP + +E R D L + TI NL +VP G++ FFPSY
Sbjct: 511 DKRQLWVGIIPKGPDGTVLNSAYERRFSEDYLSSLGKTIGNLVRVVPHGLLVFFPSYPVM 570
Query: 603 AIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDYGTSV---EKGGALMLSVI 659
Y R++ F +RI + K +F EP+ +V+ Y + + + GA L+V
Sbjct: 571 DKSLEYWREHDFAKRIEEV---KPMFVEPRNKGSFAEVMDAYYSKIACPKSNGAAFLAVC 627
Query: 660 GGKLSEGLNFSDDLGRCVVV 679
GK SEGL+F+D GR V++
Sbjct: 628 RGKASEGLDFADMNGRGVII 647
Score = 139 (54.0 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 41/140 (29%), Positives = 65/140 (46%)
Query: 274 IKYILLNPANHFTDIV-QDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 332
+ Y +P ++V Q R+II+ GT+ P+S F ++ +P + HVI
Sbjct: 457 LSYWCFSPGYSMHELVRQGVRTIILTSGTLSPLSSFTMEM----QIPFPVL--LENPHVI 510
Query: 333 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDY- 391
K + I+ GP + +E R D L + TI NL +VP G++ FFPSY
Sbjct: 511 DKRQLWVGIIPKGPDGTVLNSAYERRFSEDYLSSLGKTIGNLVRVVPHGLLVFFPSYPVM 570
Query: 392 -EAIVYNYMPDIEKTQEKPK 410
+++ Y D K E+ K
Sbjct: 571 DKSLEYWREHDFAKRIEEVK 590
>CGD|CAL0004839 [details] [associations]
symbol:HTS1 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0032543 "mitochondrial translation" evidence=IEA] [GO:0006427
"histidyl-tRNA aminoacylation" evidence=IEA] [GO:0004812
"aminoacyl-tRNA ligase activity" evidence=IEA] InterPro:IPR004516
InterPro:IPR015807 PIRSF:PIRSF001549 InterPro:IPR004154
CGD:CAL0004839 HAMAP:MF_00127 GO:GO:0005524 GO:GO:0005737
SUPFAM:SSF52954 EMBL:AACQ01000012 Gene3D:3.40.50.800 Pfam:PF03129
EMBL:AACQ01000011 PANTHER:PTHR11476 eggNOG:COG0124 KO:K01892
GO:GO:0004821 GO:GO:0006427 TIGRFAMs:TIGR00442 RefSeq:XP_721959.1
RefSeq:XP_722119.1 ProteinModelPortal:Q5AJX0 STRING:Q5AJX0
GeneID:3636293 GeneID:3636532 KEGG:cal:CaO19.11533
KEGG:cal:CaO19.4051 Uniprot:Q5AJX0
Length = 501
Score = 225 (84.3 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 64/196 (32%), Positives = 94/196 (47%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHV-DLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQI 59
MV EK EVADKIGE+V +G + +++E L + E L + A++G+E +++L Y
Sbjct: 219 MVVEKGQPEEVADKIGEFVKHNGSIREVLEYLQSSEILKSNDSAQKGIEEMQILADYVDA 278
Query: 60 YGLKDTIVFDLSLARGLDYYTGVIYEAVLKDQAVGSVAGGGRYDNLVGMFDPKNKTTPCV 119
+ + + FDLSLARGLDYYTG+IYEAV A A + +
Sbjct: 279 FDITQYLSFDLSLARGLDYYTGLIYEAVTAASAPPENATELKAKSKDDDASAYVGVGSIA 338
Query: 120 AAKLLHEVQGLLET--SCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYV---ASA 174
A + G+ S GVERLFSII+NR + T V
Sbjct: 339 AGGRYDNLVGMFSNGKSIPCVGVSFGVERLFSIIKNRANLNNISANHTDVFVMAFGGGEG 398
Query: 175 QKNLVEPRMQLCHELW 190
++ RM++ ++LW
Sbjct: 399 WNGFLKERMEITNKLW 414
>UNIPROTKB|Q9BX63 [details] [associations]
symbol:BRIP1 "Fanconi anemia group J protein" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur
cluster binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=NAS] [GO:0003677 "DNA binding" evidence=NAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0000077 "DNA damage checkpoint"
evidence=NAS] [GO:0006302 "double-strand break repair"
evidence=NAS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0031965 "nuclear membrane" evidence=IDA]
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005737
GO:GO:0000077 GO:GO:0046872 GO:GO:0003677 GO:GO:0031965
GO:GO:0006357 GO:GO:0051539 GO:GO:0004003 GO:GO:0006302 MIM:114480
InterPro:IPR014001 SMART:SM00487 CleanEx:HS_BACH1 Orphanet:145
PDB:1T29 PDBsum:1T29 MIM:227650 Orphanet:84 eggNOG:COG1199
TIGRFAMs:TIGR00604 CTD:83990 HOGENOM:HOG000068083
HOVERGEN:HBG081519 KO:K15362 OrthoDB:EOG4J6RQ8 EMBL:AF360549
EMBL:AC002994 EMBL:AC005969 EMBL:AC060798 EMBL:BC101472
EMBL:BC101474 EMBL:AK074713 IPI:IPI00012500 IPI:IPI00514398
RefSeq:NP_114432.2 UniGene:Hs.128903 PDB:3AL3 PDBsum:3AL3
ProteinModelPortal:Q9BX63 SMR:Q9BX63 DIP:DIP-41787N IntAct:Q9BX63
MINT:MINT-275883 STRING:Q9BX63 PhosphoSite:Q9BX63 DMDM:57012613
PaxDb:Q9BX63 PRIDE:Q9BX63 DNASU:83990 Ensembl:ENST00000259008
GeneID:83990 KEGG:hsa:83990 UCSC:uc002izk.2 GeneCards:GC17M059759
H-InvDB:HIX0202529 HGNC:HGNC:20473 HPA:HPA005474 MIM:605882
MIM:609054 neXtProt:NX_Q9BX63 PharmGKB:PA134906421
InParanoid:Q9BX63 EvolutionaryTrace:Q9BX63 GenomeRNAi:83990
NextBio:73148 ArrayExpress:Q9BX63 Bgee:Q9BX63 CleanEx:HS_BRIP1
Genevestigator:Q9BX63 GermOnline:ENSG00000136492 Uniprot:Q9BX63
Length = 1249
Score = 231 (86.4 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 66/229 (28%), Positives = 116/229 (50%)
Query: 466 NEDGRILVTKNPELSKS----HI-KYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKD 520
+++G +++ KN + S+ H+ + LNPA F+DI ++I++ GT+ P+ F
Sbjct: 566 DKNGLLVLPKNKKRSRQKTAVHVLNFWCLNPAVAFSDINGKVQTIVLTSGTLSPMKSFSS 625
Query: 521 QLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMT 580
+L GV + H+I + + SGP R TF+N + E+
Sbjct: 626 EL----GVTFTI--QLEANHIIKNSQVWVGTIGSGPKGRNLCATFQNTETFEFQDEVGAL 679
Query: 581 ITNLCTIVPKGMVCFFPSYDY-EAIVYNYMRDN--HFIERIARIAKKKVVFREPK--KTS 635
+ ++C V +G++CF PSY E + ++ H +E + K V EP+ + +
Sbjct: 680 LLSVCQTVSQGILCFLPSYKLLEKLKERWLSTGLWHNLELV------KTVIVEPQGGEKT 733
Query: 636 EVDKVLSDYGTSV----EKGGALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
D++L Y ++ EK GAL+++V GK+SEGL+FSDD R V+ +
Sbjct: 734 NFDELLQVYYDAIKYKGEKDGALLVAVCRGKVSEGLDFSDDNARAVITI 782
Score = 154 (59.3 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 38/139 (27%), Positives = 69/139 (49%)
Query: 256 NEDGRILVTKNPELSKS----HI-KYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKD 310
+++G +++ KN + S+ H+ + LNPA F+DI ++I++ GT+ P+ F
Sbjct: 566 DKNGLLVLPKNKKRSRQKTAVHVLNFWCLNPAVAFSDINGKVQTIVLTSGTLSPMKSFSS 625
Query: 311 QLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMT 370
+L GV + H+I + + SGP R TF+N + E+
Sbjct: 626 EL----GVTFTI--QLEANHIIKNSQVWVGTIGSGPKGRNLCATFQNTETFEFQDEVGAL 679
Query: 371 ITNLCTIVPKGMVCFFPSY 389
+ ++C V +G++CF PSY
Sbjct: 680 LLSVCQTVSQGILCFLPSY 698
>WB|WBGene00001049 [details] [associations]
symbol:dog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0043570
"maintenance of DNA repeat elements" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0000723 "telomere maintenance"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI;IMP] [GO:0090329 "regulation of DNA-dependent DNA
replication" evidence=IGI;IMP] InterPro:IPR002464
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 GO:GO:0005524
GO:GO:0003677 GO:GO:0000003 GO:GO:0004003 GO:GO:0000723
GO:GO:0006289 GO:GO:0043570 eggNOG:COG1199
GeneTree:ENSGT00530000063199 GO:GO:0090329 KO:K15362 EMBL:Z81526
PIR:T21711 RefSeq:NP_493618.1 ProteinModelPortal:O62217 SMR:O62217
STRING:O62217 PaxDb:O62217 EnsemblMetazoa:F33H2.1.1
EnsemblMetazoa:F33H2.1.2 GeneID:173370 KEGG:cel:CELE_F33H2.1
UCSC:F33H2.1 CTD:173370 WormBase:F33H2.1 HOGENOM:HOG000021716
InParanoid:O62217 OMA:EKELDDS NextBio:879367 Uniprot:O62217
Length = 983
Score = 229 (85.7 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 64/208 (30%), Positives = 105/208 (50%)
Query: 481 KSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGH 540
K+ I ++PA F D + RSI++A GT+ P+ K +L G+ E +
Sbjct: 659 KTTISLWCMSPALSFFDAFNETRSIVLASGTLCPMDTLKTEL----GM-EFK-QQVEGDQ 712
Query: 541 VIPKENILPLILCSGPTNRKFDLTFENRTKGDT--LKEIAMTITNLCTIVPKGMVCFFPS 598
VI K+NI +L GP + T+ N + ++ E+ I +C+ VP G++CF PS
Sbjct: 713 VINKDNIFAAVLPIGPFGNRIQCTYRNTSDPESSFYCELGAIIKYVCSNVPAGILCFLPS 772
Query: 599 YDYEAIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDYGTSV--------EK 650
Y + M N + +I KKVV EP+++SE+ V+ + ++
Sbjct: 773 YRVLDQLKQCMIRN---STMRQIEMKKVVLYEPRRSSELTSVMDQFDAAIFDPSRFGANI 829
Query: 651 GGALMLSVIGGKLSEGLNFSDDLGRCVV 678
G+LM +V GK+SEG++F+DD R V+
Sbjct: 830 NGSLMFAVFRGKVSEGIDFADDRARVVI 857
Score = 143 (55.4 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 38/121 (31%), Positives = 61/121 (50%)
Query: 271 KSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGH 330
K+ I ++PA F D + RSI++A GT+ P+ K +L G+ E +
Sbjct: 659 KTTISLWCMSPALSFFDAFNETRSIVLASGTLCPMDTLKTEL----GM-EFK-QQVEGDQ 712
Query: 331 VIPKENILPLILCSGPTNRKFDLTFENRTKGDT--LKEIAMTITNLCTIVPKGMVCFFPS 388
VI K+NI +L GP + T+ N + ++ E+ I +C+ VP G++CF PS
Sbjct: 713 VINKDNIFAAVLPIGPFGNRIQCTYRNTSDPESSFYCELGAIIKYVCSNVPAGILCFLPS 772
Query: 389 Y 389
Y
Sbjct: 773 Y 773
>RGD|1307659 [details] [associations]
symbol:Brip1 "BRCA1 interacting protein C-terminal helicase 1"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IDA] [GO:0031965 "nuclear membrane" evidence=ISO]
[GO:0071295 "cellular response to vitamin" evidence=IEP]
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00491 RGD:1307659
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0008285 GO:GO:0003677 GO:GO:0004003 TIGRFAMs:TIGR00604
IPI:IPI00781914 Ensembl:ENSRNOT00000055817 ArrayExpress:D4AD12
GO:GO:0071295 Uniprot:D4AD12
Length = 818
Score = 234 (87.4 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 64/220 (29%), Positives = 108/220 (49%)
Query: 473 VTKNPELSKSHI-----KYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLG 527
V KN + S+ I + LNPA F+DI R+I++ GT+ P+ F +L +
Sbjct: 496 VPKNKKHSRQKIGVNVLNFWCLNPAVAFSDINDKVRTIVLTSGTLSPLKSFSSELGVTFN 555
Query: 528 VPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTI 587
+ HVI + + SGP R TF++ + E+ M + ++C
Sbjct: 556 I------QLEANHVISNSQVWVGTVGSGPKGRNLCATFQHTETFEFQDEVGMLLLSVCQT 609
Query: 588 VPKGMVCFFPSYDYEAIVYNYMRDNHFIERIAR-IAKKKVVFREPK--KTSEVDKVLSDY 644
V +G++CF PSY + +R+ + + K V EP+ + ++ D++L Y
Sbjct: 610 VSQGILCFLPSYK----LLEKLRERWIFTGLWHSLESVKTVIAEPQGGEKTDFDELLQVY 665
Query: 645 GTSV----EKGGALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
++ EK GAL+++V GK+SEGL+FSDD R V+ +
Sbjct: 666 YDAIKFKGEKDGALLIAVCRGKVSEGLDFSDDNARAVITI 705
Score = 153 (58.9 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 38/132 (28%), Positives = 62/132 (46%)
Query: 263 VTKNPELSKSHI-----KYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLG 317
V KN + S+ I + LNPA F+DI R+I++ GT+ P+ F +L +
Sbjct: 496 VPKNKKHSRQKIGVNVLNFWCLNPAVAFSDINDKVRTIVLTSGTLSPLKSFSSELGVTFN 555
Query: 318 VPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTI 377
+ HVI + + SGP R TF++ + E+ M + ++C
Sbjct: 556 I------QLEANHVISNSQVWVGTVGSGPKGRNLCATFQHTETFEFQDEVGMLLLSVCQT 609
Query: 378 VPKGMVCFFPSY 389
V +G++CF PSY
Sbjct: 610 VSQGILCFLPSY 621
Score = 37 (18.1 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 170 YVASAQKNLVEPRMQLCHELWGGEK 194
++ + KNLVE + ++W G +
Sbjct: 371 WLETNSKNLVERDYESSCKIWSGNE 395
>UNIPROTKB|B4GU19 [details] [associations]
symbol:GL14463 "Regulator of telomere elongation helicase 1
homolog" species:7234 "Drosophila persimilis" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 GO:GO:0010569 TIGRFAMs:TIGR00604 KO:K11136
OrthoDB:EOG4S4MX7 EMBL:CH479190 RefSeq:XP_002022098.1
EnsemblMetazoa:FBtr0180078 GeneID:6596883 KEGG:dpe:Dper_GL14463
FlyBase:FBgn0152068 Uniprot:B4GU19
Length = 1009
Score = 223 (83.6 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 57/214 (26%), Positives = 103/214 (48%)
Query: 469 GRILVTKNPELSKSHIKYILLNPANHFTDIVQ-DARSIIVAGGTMEPVSEFKDQLFGSLG 527
G I T + + + NP ++ RS+I+ GT+ P+ L L
Sbjct: 440 GNITTTGTSSKAAKIVNFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKP----LIAELA 495
Query: 528 VPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTI 587
+P ++ H H++ + + I+ +GP ++ F+NR + + TI N+ I
Sbjct: 496 IPVAQ--HLENPHIVDQSQVYVKIIGTGPDRQQLISNFKNRDNPKYISSLGQTILNVARI 553
Query: 588 VPKGMVCFFPSYDYEAIVYNYMRDNHFIERI-ARIAKKKVVFREPKKTSEVDKVLSDYGT 646
VP G++ FFPSY + N D + A I+ KK +F EP+ + + ++
Sbjct: 554 VPDGLLVFFPSYP----MLNKCVDAWQASGLWADISCKKPIFVEPRGKDQFTSTMEEFYQ 609
Query: 647 SV-EKGGALMLSVIGGKLSEGLNFSDDLGRCVVV 679
++ + GA+ ++V GK+SEGL+F+D GR V++
Sbjct: 610 AIRDSKGAVFMAVCRGKVSEGLDFADRNGRAVII 643
Score = 147 (56.8 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 34/132 (25%), Positives = 60/132 (45%)
Query: 259 GRILVTKNPELSKSHIKYILLNPANHFTDIVQ-DARSIIVAGGTMEPVSEFKDQLFGSLG 317
G I T + + + NP ++ RS+I+ GT+ P+ L L
Sbjct: 440 GNITTTGTSSKAAKIVNFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKP----LIAELA 495
Query: 318 VPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTI 377
+P ++ H H++ + + I+ +GP ++ F+NR + + TI N+ I
Sbjct: 496 IPVAQ--HLENPHIVDQSQVYVKIIGTGPDRQQLISNFKNRDNPKYISSLGQTILNVARI 553
Query: 378 VPKGMVCFFPSY 389
VP G++ FFPSY
Sbjct: 554 VPDGLLVFFPSY 565
>UNIPROTKB|Q29FS3 [details] [associations]
symbol:GA17940 "Regulator of telomere elongation helicase 1
homolog" species:46245 "Drosophila pseudoobscura pseudoobscura"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0010569 "regulation of double-strand break repair
via homologous recombination" evidence=ISS] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 GO:GO:0010569 eggNOG:COG1199 TIGRFAMs:TIGR00604
EMBL:CH379065 KO:K11136 OrthoDB:EOG4S4MX7 RefSeq:XP_001354453.2
GeneID:4814338 KEGG:dpo:Dpse_GA17940 FlyBase:FBgn0077949
InParanoid:Q29FS3 Uniprot:Q29FS3
Length = 1009
Score = 223 (83.6 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 57/214 (26%), Positives = 103/214 (48%)
Query: 469 GRILVTKNPELSKSHIKYILLNPANHFTDIVQ-DARSIIVAGGTMEPVSEFKDQLFGSLG 527
G I T + + + NP ++ RS+I+ GT+ P+ L L
Sbjct: 440 GNITTTGTSSKAAKIVNFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKP----LIAELA 495
Query: 528 VPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTI 587
+P ++ H H++ + + I+ +GP ++ F+NR + + TI N+ I
Sbjct: 496 IPVAQ--HLENPHIVDQSQVYVKIIGTGPDRQQLISNFKNRDNPKYISSLGQTILNVARI 553
Query: 588 VPKGMVCFFPSYDYEAIVYNYMRDNHFIERI-ARIAKKKVVFREPKKTSEVDKVLSDYGT 646
VP G++ FFPSY + N D + A I+ KK +F EP+ + + ++
Sbjct: 554 VPDGLLVFFPSYP----MLNKCVDAWQASGLWADISCKKPIFVEPRGKDQFTSTMEEFYQ 609
Query: 647 SV-EKGGALMLSVIGGKLSEGLNFSDDLGRCVVV 679
++ + GA+ ++V GK+SEGL+F+D GR V++
Sbjct: 610 AIRDSKGAVFMAVCRGKVSEGLDFADRNGRAVII 643
Score = 147 (56.8 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 34/132 (25%), Positives = 60/132 (45%)
Query: 259 GRILVTKNPELSKSHIKYILLNPANHFTDIVQ-DARSIIVAGGTMEPVSEFKDQLFGSLG 317
G I T + + + NP ++ RS+I+ GT+ P+ L L
Sbjct: 440 GNITTTGTSSKAAKIVNFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKP----LIAELA 495
Query: 318 VPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTI 377
+P ++ H H++ + + I+ +GP ++ F+NR + + TI N+ I
Sbjct: 496 IPVAQ--HLENPHIVDQSQVYVKIIGTGPDRQQLISNFKNRDNPKYISSLGQTILNVARI 553
Query: 378 VPKGMVCFFPSY 389
VP G++ FFPSY
Sbjct: 554 VPDGLLVFFPSY 565
>UNIPROTKB|Q7QEI1 [details] [associations]
symbol:AGAP000634 "Regulator of telomere elongation
helicase 1 homolog" species:7165 "Anopheles gambiae" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 GO:GO:0010569 eggNOG:COG1199 TIGRFAMs:TIGR00604
EMBL:AAAB01008847 HOGENOM:HOG000007558 KO:K11136 OrthoDB:EOG4S4MX7
RefSeq:XP_311162.5 GeneID:1272449 KEGG:aga:AgaP_AGAP000634
VectorBase:AGAP000634 CTD:1272449 PhylomeDB:Q7QEI1 Uniprot:Q7QEI1
Length = 991
Score = 221 (82.9 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 62/211 (29%), Positives = 104/211 (49%)
Query: 475 KNPELSKSH-IKYILLNPANHFTDIVQDA-RSIIVAGGTMEPVSEFKDQLFGSLGVPESR 532
K P S S I + NP +V RSII+ GT+ P+ F +L SL V S
Sbjct: 445 KAPVKSTSKVINFWCFNPGFGMRQLVDSGTRSIILTSGTLAPLKPFISEL--SLPVAVS- 501
Query: 533 IHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGM 592
H+I + + ++ GP + + +F+NR+ + + + T +LC I+P G+
Sbjct: 502 ---LENPHIIARSQVYVKVITHGPDRVELNSSFKNRSNPEYIASLGRTALSLCPIIPGGL 558
Query: 593 VCFFPSYDYEAIVYNYMRDNHFIERI-ARIAKKKVVFREPKKTSEVDKVLSDYGTSVE-- 649
+ FFPSY + N + I +I++ K +F EP+ + +++Y V
Sbjct: 559 LIFFPSYP----LLNKCSEEWQASGIWGQISRLKQIFVEPRGKDQFTTTMAEYYAQVRDP 614
Query: 650 -KGGALMLSVIGGKLSEGLNFSDDLGRCVVV 679
GA+ ++V GK+SEGL+F+D GR V++
Sbjct: 615 ASRGAIFMAVCRGKVSEGLDFADANGRAVMI 645
Score = 148 (57.2 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 39/127 (30%), Positives = 62/127 (48%)
Query: 265 KNPELSKSH-IKYILLNPANHFTDIVQDA-RSIIVAGGTMEPVSEFKDQLFGSLGVPESR 322
K P S S I + NP +V RSII+ GT+ P+ F +L SL V S
Sbjct: 445 KAPVKSTSKVINFWCFNPGFGMRQLVDSGTRSIILTSGTLAPLKPFISEL--SLPVAVS- 501
Query: 323 IHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGM 382
H+I + + ++ GP + + +F+NR+ + + + T +LC I+P G+
Sbjct: 502 ---LENPHIIARSQVYVKVITHGPDRVELNSSFKNRSNPEYIASLGRTALSLCPIIPGGL 558
Query: 383 VCFFPSY 389
+ FFPSY
Sbjct: 559 LIFFPSY 565
>UNIPROTKB|B4NDG5 [details] [associations]
symbol:GK24923 "Regulator of telomere elongation helicase 1
homolog" species:7260 "Drosophila willistoni" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 EMBL:CH964239 GO:GO:0010569 eggNOG:COG1199
TIGRFAMs:TIGR00604 KO:K11136 OMA:PFPPLKD OrthoDB:EOG4S4MX7
RefSeq:XP_002071885.1 STRING:B4NDG5 EnsemblMetazoa:FBtr0255574
GeneID:6648559 KEGG:dwi:Dwil_GK24923 FlyBase:FBgn0226882
InParanoid:B4NDG5 Uniprot:B4NDG5
Length = 998
Score = 220 (82.5 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 56/199 (28%), Positives = 98/199 (49%)
Query: 484 IKYILLNPANHFTDIVQ-DARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 542
I + NP ++ RS+I+ GT+ P+ L L +P ++ H H++
Sbjct: 460 INFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKP----LIAELAIPVAQ--HLENPHIV 513
Query: 543 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYE 602
+ + I+ +GP ++ F+NR + + TI N+ IVP G++ FFPSY
Sbjct: 514 DQSQVYVKIIGTGPDRQQLISNFKNRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYP-- 571
Query: 603 AIVYNYMRDNHFIERI-ARIAKKKVVFREPKKTSEVDKVLSDYGTSV-EKGGALMLSVIG 660
+ N D + A IA KK +F EP+ + + ++ ++ + GA ++V
Sbjct: 572 --MLNKCVDAWQTSGLWADIAAKKPIFLEPRGKDQFTTTMEEFYQAIRDSKGACFMAVCR 629
Query: 661 GKLSEGLNFSDDLGRCVVV 679
GK+SEGL+F+D GR V++
Sbjct: 630 GKVSEGLDFADRNGRAVII 648
Score = 141 (54.7 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 32/117 (27%), Positives = 56/117 (47%)
Query: 274 IKYILLNPANHFTDIVQ-DARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 332
I + NP ++ RS+I+ GT+ P+ L L +P ++ H H++
Sbjct: 460 INFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKP----LIAELAIPVAQ--HLENPHIV 513
Query: 333 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSY 389
+ + I+ +GP ++ F+NR + + TI N+ IVP G++ FFPSY
Sbjct: 514 DQSQVYVKIIGTGPDRQQLISNFKNRDNPKYISSLGQTILNVSRIVPDGLLVFFPSY 570
>ZFIN|ZDB-GENE-081107-11 [details] [associations]
symbol:brip1 "BRCA1 interacting protein C-terminal
helicase 1" species:7955 "Danio rerio" [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
ZFIN:ZDB-GENE-081107-11 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004003 InterPro:IPR014001 SMART:SM00487 eggNOG:COG1199
TIGRFAMs:TIGR00604 CTD:83990 HOGENOM:HOG000068083
HOVERGEN:HBG081519 KO:K15362 OrthoDB:EOG4J6RQ8 EMBL:EF088194
IPI:IPI00877443 RefSeq:NP_001103766.1 UniGene:Dr.85128
ProteinModelPortal:A8QLH7 STRING:A8QLH7 GeneID:794038
KEGG:dre:794038 NextBio:20931680 ArrayExpress:A8QLH7 Uniprot:A8QLH7
Length = 1217
Score = 221 (82.9 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 62/208 (29%), Positives = 104/208 (50%)
Query: 484 IKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIP 543
+ + LNPA F+D+ RSI++ GT+ P+ F +L G+ S HVI
Sbjct: 618 LSFWCLNPAVAFSDLSSTVRSIVLTSGTLSPMGSFSSEL----GIKFSI--QLEANHVIN 671
Query: 544 KENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYEA 603
K + + +GP RK TF++ E+ + +C V +G++CF PSY
Sbjct: 672 KSQVWVGTIGAGPQGRKLCATFQHAETFAFQDEVGALLLKVCHTVSRGVLCFLPSYK--- 728
Query: 604 IVYNYMRDNHFIERI-ARIAKKKVVFREPKK--TSEVDKVLSDY-----GTSVE---KGG 652
+ + +RD + ++ + K V EP+ + D++L Y GT+ + + G
Sbjct: 729 -MLDKLRDRWTNTGLWDKLEECKTVITEPRGGGKGDFDELLQTYYEAIRGTAAKGEKRDG 787
Query: 653 ALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
AL+++V GK+SEGL+F+DD R VV +
Sbjct: 788 ALLVAVCRGKVSEGLDFTDDNARAVVTI 815
Score = 151 (58.2 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 35/116 (30%), Positives = 56/116 (48%)
Query: 274 IKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIP 333
+ + LNPA F+D+ RSI++ GT+ P+ F +L G+ S HVI
Sbjct: 618 LSFWCLNPAVAFSDLSSTVRSIVLTSGTLSPMGSFSSEL----GIKFSI--QLEANHVIN 671
Query: 334 KENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSY 389
K + + +GP RK TF++ E+ + +C V +G++CF PSY
Sbjct: 672 KSQVWVGTIGAGPQGRKLCATFQHAETFAFQDEVGALLLKVCHTVSRGVLCFLPSY 727
>UNIPROTKB|D4ACW5 [details] [associations]
symbol:Brip1 "Protein Brip1" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00491 RGD:1307659
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0006357 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 TIGRFAMs:TIGR00604 OrthoDB:EOG4J6RQ8 IPI:IPI00372668
Ensembl:ENSRNOT00000038829 ArrayExpress:D4ACW5 Uniprot:D4ACW5
Length = 1170
Score = 234 (87.4 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 64/220 (29%), Positives = 108/220 (49%)
Query: 473 VTKNPELSKSHI-----KYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLG 527
V KN + S+ I + LNPA F+DI R+I++ GT+ P+ F +L +
Sbjct: 574 VPKNKKHSRQKIGVNVLNFWCLNPAVAFSDINDKVRTIVLTSGTLSPLKSFSSELGVTFN 633
Query: 528 VPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTI 587
+ HVI + + SGP R TF++ + E+ M + ++C
Sbjct: 634 I------QLEANHVISNSQVWVGTVGSGPKGRNLCATFQHTETFEFQDEVGMLLLSVCQT 687
Query: 588 VPKGMVCFFPSYDYEAIVYNYMRDNHFIERIAR-IAKKKVVFREPK--KTSEVDKVLSDY 644
V +G++CF PSY + +R+ + + K V EP+ + ++ D++L Y
Sbjct: 688 VSQGILCFLPSYK----LLEKLRERWIFTGLWHSLESVKTVIAEPQGGEKTDFDELLQVY 743
Query: 645 GTSV----EKGGALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
++ EK GAL+++V GK+SEGL+FSDD R V+ +
Sbjct: 744 YDAIKFKGEKDGALLIAVCRGKVSEGLDFSDDNARAVITI 783
Score = 153 (58.9 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 38/132 (28%), Positives = 62/132 (46%)
Query: 263 VTKNPELSKSHI-----KYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLG 317
V KN + S+ I + LNPA F+DI R+I++ GT+ P+ F +L +
Sbjct: 574 VPKNKKHSRQKIGVNVLNFWCLNPAVAFSDINDKVRTIVLTSGTLSPLKSFSSELGVTFN 633
Query: 318 VPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTI 377
+ HVI + + SGP R TF++ + E+ M + ++C
Sbjct: 634 I------QLEANHVISNSQVWVGTVGSGPKGRNLCATFQHTETFEFQDEVGMLLLSVCQT 687
Query: 378 VPKGMVCFFPSY 389
V +G++CF PSY
Sbjct: 688 VSQGILCFLPSY 699
Score = 37 (18.1 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 170 YVASAQKNLVEPRMQLCHELWGGEK 194
++ + KNLVE + ++W G +
Sbjct: 449 WLETNSKNLVERDYESSCKIWSGNE 473
>UNIPROTKB|E1C1X9 [details] [associations]
symbol:BRIP1 "Fanconi anemia group J protein homolog"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004003
TIGRFAMs:TIGR00604 GeneTree:ENSGT00530000063199 EMBL:AADN02025783
IPI:IPI00820128 Ensembl:ENSGALT00000008466 ArrayExpress:E1C1X9
Uniprot:E1C1X9
Length = 1249
Score = 221 (82.9 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 60/204 (29%), Positives = 104/204 (50%)
Query: 484 IKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIP 543
+ + LNPA F+D+ D R++++ GT+ P+ F +L GV S HVI
Sbjct: 600 LNFWCLNPAVAFSDL-NDVRTVVLTSGTLSPMDSFSSEL----GVKFSI--QLEANHVIR 652
Query: 544 KENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYEA 603
+ + +GP RK TF++ + E+ + ++C V +G++CF PSY
Sbjct: 653 NSQVWVGTIGTGPNGRKLCATFQHTETFEFQDEVGALLLSVCQKVGQGILCFLPSYK--- 709
Query: 604 IVYNYMRDNHFIERIAR-IAKKKVVFREPK--KTSEVDKVLSDYGTSV----EKGGALML 656
+ + ++D + R + K V EP+ S+ D++L Y ++ EK GAL++
Sbjct: 710 -LLDKLKDRWIHTGLWRNLELVKTVIAEPQGGAKSDFDELLKIYYDAIKFKGEKDGALLI 768
Query: 657 SVIGGKLSEGLNFSDDLGRCVVVM 680
+V GK+SEGL+F D+ R V+ +
Sbjct: 769 AVCRGKVSEGLDFCDENARAVITI 792
Score = 146 (56.5 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 34/116 (29%), Positives = 58/116 (50%)
Query: 274 IKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIP 333
+ + LNPA F+D+ D R++++ GT+ P+ F +L GV S HVI
Sbjct: 600 LNFWCLNPAVAFSDL-NDVRTVVLTSGTLSPMDSFSSEL----GVKFSI--QLEANHVIR 652
Query: 334 KENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSY 389
+ + +GP RK TF++ + E+ + ++C V +G++CF PSY
Sbjct: 653 NSQVWVGTIGTGPNGRKLCATFQHTETFEFQDEVGALLLSVCQKVGQGILCFLPSY 708
>UNIPROTKB|Q3YK19 [details] [associations]
symbol:BRIP1 "Fanconi anemia group J protein homolog"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur
cluster binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006281 "DNA repair" evidence=TAS] InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005737 GO:GO:0005654 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0006357 GO:GO:0051539 GO:GO:0004003
Reactome:REACT_115612 eggNOG:COG1199 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 EMBL:DQ109581 IPI:IPI00593256
RefSeq:NP_001028230.1 UniGene:Gga.17801 ProteinModelPortal:Q3YK19
STRING:Q3YK19 Ensembl:ENSGALT00000039225 GeneID:417642
KEGG:gga:417642 CTD:83990 HOGENOM:HOG000068083 HOVERGEN:HBG081519
InParanoid:Q3YK19 KO:K15362 OMA:GYETSCK OrthoDB:EOG4J6RQ8
NextBio:20820915 ArrayExpress:Q3YK19 Uniprot:Q3YK19
Length = 1252
Score = 221 (82.9 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 60/204 (29%), Positives = 104/204 (50%)
Query: 484 IKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIP 543
+ + LNPA F+D+ D R++++ GT+ P+ F +L GV S HVI
Sbjct: 600 LNFWCLNPAVAFSDL-NDVRTVVLTSGTLSPMDSFSSEL----GVKFSI--QLEANHVIR 652
Query: 544 KENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYEA 603
+ + +GP RK TF++ + E+ + ++C V +G++CF PSY
Sbjct: 653 NSQVWVGTIGTGPNGRKLCATFQHTETFEFQDEVGALLLSVCQKVGQGILCFLPSYK--- 709
Query: 604 IVYNYMRDNHFIERIAR-IAKKKVVFREPK--KTSEVDKVLSDYGTSV----EKGGALML 656
+ + ++D + R + K V EP+ S+ D++L Y ++ EK GAL++
Sbjct: 710 -LLDKLKDRWIHTGLWRNLELVKTVIAEPQGGAKSDFDELLKIYYDAIKFKGEKDGALLI 768
Query: 657 SVIGGKLSEGLNFSDDLGRCVVVM 680
+V GK+SEGL+F D+ R V+ +
Sbjct: 769 AVCRGKVSEGLDFCDENARAVITI 792
Score = 146 (56.5 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 34/116 (29%), Positives = 58/116 (50%)
Query: 274 IKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIP 333
+ + LNPA F+D+ D R++++ GT+ P+ F +L GV S HVI
Sbjct: 600 LNFWCLNPAVAFSDL-NDVRTVVLTSGTLSPMDSFSSEL----GVKFSI--QLEANHVIR 652
Query: 334 KENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSY 389
+ + +GP RK TF++ + E+ + ++C V +G++CF PSY
Sbjct: 653 NSQVWVGTIGTGPNGRKLCATFQHTETFEFQDEVGALLLSVCQKVGQGILCFLPSY 708
>FB|FBgn0029798 [details] [associations]
symbol:CG4078 species:7227 "Drosophila melanogaster"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0006289 "nucleotide-excision repair" evidence=ISS] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 EMBL:AE014298 GO:GO:0006281
GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
GO:GO:0010569 eggNOG:COG1199 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 KO:K11136 OMA:PFPPLKD
OrthoDB:EOG4S4MX7 EMBL:BT021290 EMBL:EU217688 EMBL:EU217689
EMBL:EU217690 EMBL:EU217691 EMBL:EU217692 EMBL:EU217693
EMBL:EU217694 EMBL:EU217695 EMBL:EU217696 EMBL:EU217697
EMBL:EU217698 EMBL:EU217699 RefSeq:NP_572254.1 UniGene:Dm.11709
ProteinModelPortal:Q9W484 SMR:Q9W484 IntAct:Q9W484
MINT:MINT-4080348 PaxDb:Q9W484 PRIDE:Q9W484
EnsemblMetazoa:FBtr0070807 EnsemblMetazoa:FBtr0332398 GeneID:31497
KEGG:dme:Dmel_CG4078 UCSC:CG4078-RA FlyBase:FBgn0029798
InParanoid:Q9W484 PhylomeDB:Q9W484 GenomeRNAi:31497 NextBio:773915
Bgee:Q9W484 Uniprot:Q9W484
Length = 985
Score = 216 (81.1 bits), Expect = 7.8e-14, P = 7.8e-14
Identities = 54/199 (27%), Positives = 98/199 (49%)
Query: 484 IKYILLNPANHFTDIVQ-DARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 542
I + NP ++ RS+I+ GT+ P+ L L +P ++ H H++
Sbjct: 454 INFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKP----LIAELAIPVAQ--HLENPHIV 507
Query: 543 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYE 602
+ + I+ +GP ++ + NR + + TI N+ IVP G++ FFPSY
Sbjct: 508 DQSQVYVKIIGTGPDRQQLISNYANRDNPKYISSLGQTILNVARIVPDGLLVFFPSYP-- 565
Query: 603 AIVYNYMRDNHFIERI-ARIAKKKVVFREPKKTSEVDKVLSDYGTSV-EKGGALMLSVIG 660
+ N D + A I+ KK +F EP+ + + ++ ++ + GA+ ++V
Sbjct: 566 --MLNKCVDAWQASGLWADISCKKPIFLEPRSKDQFTSTMEEFYQAIRDSKGAVFMAVCR 623
Query: 661 GKLSEGLNFSDDLGRCVVV 679
GK+SEGL+F+D GR V++
Sbjct: 624 GKVSEGLDFADRNGRAVII 642
Score = 137 (53.3 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 31/117 (26%), Positives = 55/117 (47%)
Query: 274 IKYILLNPANHFTDIVQ-DARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 332
I + NP ++ RS+I+ GT+ P+ L L +P ++ H H++
Sbjct: 454 INFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKP----LIAELAIPVAQ--HLENPHIV 507
Query: 333 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSY 389
+ + I+ +GP ++ + NR + + TI N+ IVP G++ FFPSY
Sbjct: 508 DQSQVYVKIIGTGPDRQQLISNYANRDNPKYISSLGQTILNVARIVPDGLLVFFPSY 564
>UNIPROTKB|B4PZB4 [details] [associations]
symbol:GE16425 "Regulator of telomere elongation helicase 1
homolog" species:7245 "Drosophila yakuba" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 GO:GO:0010569 eggNOG:COG1199 TIGRFAMs:TIGR00604
EMBL:CM000162 KO:K11136 OrthoDB:EOG4S4MX7 RefSeq:XP_002099973.1
EnsemblMetazoa:FBtr0262943 GeneID:6524109 KEGG:dya:Dyak_GE16425
FlyBase:FBgn0233951 Uniprot:B4PZB4
Length = 985
Score = 216 (81.1 bits), Expect = 7.8e-14, P = 7.8e-14
Identities = 54/199 (27%), Positives = 98/199 (49%)
Query: 484 IKYILLNPANHFTDIVQ-DARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 542
I + NP ++ RS+I+ GT+ P+ L L +P ++ H H++
Sbjct: 454 INFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKP----LIAELAIPVAQ--HLENPHIV 507
Query: 543 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYE 602
+ + I+ +GP ++ + NR + + TI N+ IVP G++ FFPSY
Sbjct: 508 DQSQVYVKIIGTGPDRQQLISNYANRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYP-- 565
Query: 603 AIVYNYMRDNHFIERI-ARIAKKKVVFREPKKTSEVDKVLSDYGTSV-EKGGALMLSVIG 660
+ N D + A I+ KK +F EP+ + + ++ ++ + GA+ ++V
Sbjct: 566 --MLNKCVDAWQASGLWADISVKKPIFLEPRSKDQFTSTMEEFYQAIRDSKGAVFMAVCR 623
Query: 661 GKLSEGLNFSDDLGRCVVV 679
GK+SEGL+F+D GR V++
Sbjct: 624 GKVSEGLDFADRNGRAVII 642
Score = 136 (52.9 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 31/117 (26%), Positives = 55/117 (47%)
Query: 274 IKYILLNPANHFTDIVQ-DARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 332
I + NP ++ RS+I+ GT+ P+ L L +P ++ H H++
Sbjct: 454 INFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKP----LIAELAIPVAQ--HLENPHIV 507
Query: 333 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSY 389
+ + I+ +GP ++ + NR + + TI N+ IVP G++ FFPSY
Sbjct: 508 DQSQVYVKIIGTGPDRQQLISNYANRDNPKYISSLGQTILNVSRIVPDGLLVFFPSY 564
>UNIPROTKB|B4I0K4 [details] [associations]
symbol:GM12432 "Regulator of telomere elongation helicase 1
homolog" species:7238 "Drosophila sechellia" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0006281
GO:GO:0051539 GO:GO:0004003 EMBL:CH480819 GO:GO:0010569
TIGRFAMs:TIGR00604 KO:K11136 OrthoDB:EOG4S4MX7
RefSeq:XP_002036876.1 EnsemblMetazoa:FBtr0195417 GeneID:6612367
KEGG:dse:Dsec_GM12432 FlyBase:FBgn0167369 Uniprot:B4I0K4
Length = 966
Score = 215 (80.7 bits), Expect = 9.8e-14, P = 9.8e-14
Identities = 54/199 (27%), Positives = 98/199 (49%)
Query: 484 IKYILLNPANHFTDIVQ-DARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 542
I + NP ++ RS+I+ GT+ P+ L L +P ++ H H++
Sbjct: 435 INFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKP----LIAELAIPVAQ--HLENPHIV 488
Query: 543 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYE 602
+ + I+ +GP ++ + NR + + TI N+ IVP G++ FFPSY
Sbjct: 489 DQSQVYVKIIGTGPDRQQLISNYANRDNPKYVSSLGQTILNVARIVPDGLLVFFPSYP-- 546
Query: 603 AIVYNYMRDNHFIERI-ARIAKKKVVFREPKKTSEVDKVLSDYGTSV-EKGGALMLSVIG 660
+ N D + A I+ KK +F EP+ + + ++ ++ + GA+ ++V
Sbjct: 547 --MLNKCVDAWQASGLWADISCKKPIFLEPRSKDQFTSTMEEFYQAIRDSKGAVFMAVCR 604
Query: 661 GKLSEGLNFSDDLGRCVVV 679
GK+SEGL+F+D GR V++
Sbjct: 605 GKVSEGLDFADRNGRAVII 623
Score = 136 (52.9 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 31/117 (26%), Positives = 55/117 (47%)
Query: 274 IKYILLNPANHFTDIVQ-DARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 332
I + NP ++ RS+I+ GT+ P+ L L +P ++ H H++
Sbjct: 435 INFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKP----LIAELAIPVAQ--HLENPHIV 488
Query: 333 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSY 389
+ + I+ +GP ++ + NR + + TI N+ IVP G++ FFPSY
Sbjct: 489 DQSQVYVKIIGTGPDRQQLISNYANRDNPKYVSSLGQTILNVARIVPDGLLVFFPSY 545
>UNIPROTKB|B3NSW1 [details] [associations]
symbol:GG18780 "Regulator of telomere elongation helicase 1
homolog" species:7220 "Drosophila erecta" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 GO:GO:0010569 TIGRFAMs:TIGR00604 EMBL:CH954180
KO:K11136 OrthoDB:EOG4S4MX7 RefSeq:XP_001977003.1
EnsemblMetazoa:FBtr0138834 GeneID:6550838 KEGG:der:Dere_GG18780
FlyBase:FBgn0110988 Uniprot:B3NSW1
Length = 985
Score = 215 (80.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 54/199 (27%), Positives = 98/199 (49%)
Query: 484 IKYILLNPANHFTDIVQ-DARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 542
I + NP ++ RS+I+ GT+ P+ L L +P ++ H H++
Sbjct: 454 INFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKP----LIAELAIPVAQ--HLENPHIV 507
Query: 543 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYE 602
+ + I+ +GP ++ + NR + + TI N+ IVP G++ FFPSY
Sbjct: 508 DQSQVYVKIIGTGPDRQQLISNYANRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYP-- 565
Query: 603 AIVYNYMRDNHFIERI-ARIAKKKVVFREPKKTSEVDKVLSDYGTSV-EKGGALMLSVIG 660
+ N D + A I+ KK +F EP+ + + ++ ++ + GA+ ++V
Sbjct: 566 --MLNKCVDAWQASGLWADISCKKPIFLEPRSKDQFTSTMEEFYQAIRDSKGAVFMAVCR 623
Query: 661 GKLSEGLNFSDDLGRCVVV 679
GK+SEGL+F+D GR V++
Sbjct: 624 GKVSEGLDFADRNGRAVII 642
Score = 136 (52.9 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 31/117 (26%), Positives = 55/117 (47%)
Query: 274 IKYILLNPANHFTDIVQ-DARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 332
I + NP ++ RS+I+ GT+ P+ L L +P ++ H H++
Sbjct: 454 INFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKP----LIAELAIPVAQ--HLENPHIV 507
Query: 333 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSY 389
+ + I+ +GP ++ + NR + + TI N+ IVP G++ FFPSY
Sbjct: 508 DQSQVYVKIIGTGPDRQQLISNYANRDNPKYISSLGQTILNVSRIVPDGLLVFFPSY 564
>UNIPROTKB|G3N0I3 [details] [associations]
symbol:BRIP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00491
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004003 TIGRFAMs:TIGR00604 GeneTree:ENSGT00530000063199
EMBL:DAAA02048371 Ensembl:ENSBTAT00000065712 Uniprot:G3N0I3
Length = 756
Score = 213 (80.0 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 61/224 (27%), Positives = 111/224 (49%)
Query: 467 EDGRILVTKNPEL--SKSHIKYI---LLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQ 521
+ G ++++KN + K+ ++ + LNPA F+DI +I++ GT+ P+ F +
Sbjct: 428 DHGLLILSKNKKRLRQKAAVRVLNFWCLNPAVAFSDINGKVWAIVLTSGTLSPMKSFSSE 487
Query: 522 LFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTI 581
L GV + HVI + + SGP R TF++ + E+ +
Sbjct: 488 L----GVTFTI--QLEANHVINNSQVWVGTIGSGPKGRSLCATFQHTETFEFQDEVGALL 541
Query: 582 TNLCTIVPKGMVCFFPSYDY-EAIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKV 640
++C + +G++CF PSY E + ++ + + K +V + + + D++
Sbjct: 542 LSVCQTISQGILCFLPSYKLLEKLKERWLSTGLWYN--LELVKTVIVEPQGGEKIDFDEL 599
Query: 641 LSDYGTSV----EKGGALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
L Y ++ EK GAL+++V GK+SEGL+FSDD R VV +
Sbjct: 600 LQMYYDAIKYKGEKDGALLVAVCRGKVSEGLDFSDDNARAVVTI 643
Score = 138 (53.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 36/138 (26%), Positives = 67/138 (48%)
Query: 257 EDGRILVTKNPEL--SKSHIKYI---LLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQ 311
+ G ++++KN + K+ ++ + LNPA F+DI +I++ GT+ P+ F +
Sbjct: 428 DHGLLILSKNKKRLRQKAAVRVLNFWCLNPAVAFSDINGKVWAIVLTSGTLSPMKSFSSE 487
Query: 312 LFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTI 371
L GV + HVI + + SGP R TF++ + E+ +
Sbjct: 488 L----GVTFTI--QLEANHVINNSQVWVGTIGSGPKGRSLCATFQHTETFEFQDEVGALL 541
Query: 372 TNLCTIVPKGMVCFFPSY 389
++C + +G++CF PSY
Sbjct: 542 LSVCQTISQGILCFLPSY 559
>UNIPROTKB|B3MSG8 [details] [associations]
symbol:GF20802 "Regulator of telomere elongation helicase 1
homolog" species:7217 "Drosophila ananassae" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 GO:GO:0010569 eggNOG:COG1199 TIGRFAMs:TIGR00604
EMBL:CH902622 KO:K11136 OrthoDB:EOG4S4MX7 RefSeq:XP_001964274.1
EnsemblMetazoa:FBtr0125502 GeneID:6503494 KEGG:dan:Dana_GF20802
FlyBase:FBgn0097808 InParanoid:B3MSG8 Uniprot:B3MSG8
Length = 994
Score = 213 (80.0 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 54/199 (27%), Positives = 96/199 (48%)
Query: 484 IKYILLNPANHFTDIVQ-DARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 542
I + NP ++ RS+I+ GT+ P+ L L +P ++ H H++
Sbjct: 454 INFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKP----LIAELAIPVAQ--HLENPHIV 507
Query: 543 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYE 602
+ + I+ +GP + + NR + + TI N+ +VP G++ FFPSY
Sbjct: 508 DQSQVYVKIIGTGPDRQPLISNYTNRDNPKYISSLGQTILNVSRLVPDGLLVFFPSYP-- 565
Query: 603 AIVYNYMRDNHFIERI-ARIAKKKVVFREPKKTSEVDKVLSDYGTSV-EKGGALMLSVIG 660
+ N D + A IA KK +F EP+ + + ++ ++ + GA ++V
Sbjct: 566 --MLNKCVDAWQASGLWADIASKKPIFLEPRGKDQFTSTMEEFYQAIRDSKGACFMAVCR 623
Query: 661 GKLSEGLNFSDDLGRCVVV 679
GK+SEGL+F+D GR V++
Sbjct: 624 GKVSEGLDFADRNGRAVII 642
Score = 132 (51.5 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 30/117 (25%), Positives = 54/117 (46%)
Query: 274 IKYILLNPANHFTDIVQ-DARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 332
I + NP ++ RS+I+ GT+ P+ L L +P ++ H H++
Sbjct: 454 INFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKP----LIAELAIPVAQ--HLENPHIV 507
Query: 333 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSY 389
+ + I+ +GP + + NR + + TI N+ +VP G++ FFPSY
Sbjct: 508 DQSQVYVKIIGTGPDRQPLISNYTNRDNPKYISSLGQTILNVSRLVPDGLLVFFPSY 564
>UNIPROTKB|E1BNG9 [details] [associations]
symbol:BRIP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004003 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 EMBL:DAAA02048371 IPI:IPI00923893
Ensembl:ENSBTAT00000048969 Uniprot:E1BNG9
Length = 1098
Score = 213 (80.0 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 61/224 (27%), Positives = 111/224 (49%)
Query: 467 EDGRILVTKNPEL--SKSHIKYI---LLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQ 521
+ G ++++KN + K+ ++ + LNPA F+DI +I++ GT+ P+ F +
Sbjct: 502 DHGLLILSKNKKRLRQKAAVRVLNFWCLNPAVAFSDINGKVWAIVLTSGTLSPMKSFSSE 561
Query: 522 LFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTI 581
L GV + HVI + + SGP R TF++ + E+ +
Sbjct: 562 L----GVTFTI--QLEANHVINNSQVWVGTIGSGPKGRSLCATFQHTETFEFQDEVGALL 615
Query: 582 TNLCTIVPKGMVCFFPSYDY-EAIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKV 640
++C + +G++CF PSY E + ++ + + K +V + + + D++
Sbjct: 616 LSVCQTISQGILCFLPSYKLLEKLKERWLSTGLWYN--LELVKTVIVEPQGGEKIDFDEL 673
Query: 641 LSDYGTSV----EKGGALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
L Y ++ EK GAL+++V GK+SEGL+FSDD R VV +
Sbjct: 674 LQMYYDAIKYKGEKDGALLVAVCRGKVSEGLDFSDDNARAVVTI 717
Score = 138 (53.6 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 36/138 (26%), Positives = 67/138 (48%)
Query: 257 EDGRILVTKNPEL--SKSHIKYI---LLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQ 311
+ G ++++KN + K+ ++ + LNPA F+DI +I++ GT+ P+ F +
Sbjct: 502 DHGLLILSKNKKRLRQKAAVRVLNFWCLNPAVAFSDINGKVWAIVLTSGTLSPMKSFSSE 561
Query: 312 LFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTI 371
L GV + HVI + + SGP R TF++ + E+ +
Sbjct: 562 L----GVTFTI--QLEANHVINNSQVWVGTIGSGPKGRSLCATFQHTETFEFQDEVGALL 615
Query: 372 TNLCTIVPKGMVCFFPSY 389
++C + +G++CF PSY
Sbjct: 616 LSVCQTISQGILCFLPSY 633
>WB|WBGene00021752 [details] [associations]
symbol:Y50D7A.2 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR001945 InterPro:IPR002464 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR010643 InterPro:IPR014013
Pfam:PF06733 Pfam:PF06777 Pfam:PF13307 PRINTS:PR00852
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0003677 GO:GO:0000003
EMBL:FO081772 GO:GO:0004003 GO:GO:0006289 eggNOG:COG1199
TIGRFAMs:TIGR00604 HOGENOM:HOG000205390 KO:K10844 OMA:KDVDGKC
GeneTree:ENSGT00550000075092 RefSeq:NP_497182.2 UniGene:Cel.30456
ProteinModelPortal:Q9N3L2 STRING:Q9N3L2 PaxDb:Q9N3L2
EnsemblMetazoa:Y50D7A.2 GeneID:175190 KEGG:cel:CELE_Y50D7A.2
UCSC:Y50D7A.2 CTD:175190 WormBase:Y50D7A.2 InParanoid:Q9N3L2
NextBio:887130 Uniprot:Q9N3L2
Length = 606
Score = 209 (78.6 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 62/230 (26%), Positives = 108/230 (46%)
Query: 453 LSVVTFLESLVNKNEDGRILVTKNPELSKSHIKYILLNPAN-HFTDIVQDARSIIVAGGT 511
LS VT L +LV+ G ++ + + S+ + + + A+ ++ +S+I+ GT
Sbjct: 246 LSQVTTLCTLVSTYSKGFSVIVEPQDGSQLAVITLSCHDASIAIRPVMSRFQSVIITSGT 305
Query: 512 MEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKG 571
+ P+ + L S I F+ + + + PL++ G FE R
Sbjct: 306 LSPLEMYPKVL----DFDPSVIASFTM--TLARPCLSPLVVARGNDQVAMTSRFEQRADV 359
Query: 572 DTLKEIAMTITNLCTIVPKGMVCFFPSYDYEAIVYNYMRDNHFIERIARIAKKKVVFREP 631
++ + + ++VP GMV FF SY Y V + H I+ + K K++F E
Sbjct: 360 AVIRNYGNLVLEMASLVPDGMVVFFTSYLYMENVIGVWYEQHIIDELM---KYKLLFIET 416
Query: 632 KKTSEVDKVLSDYGTSVEKG-GALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
E L Y + + G GA++ SV GK+SEG++FS LGRCV+++
Sbjct: 417 NDALETSAALEKYVEACDSGRGAVLFSVARGKVSEGIDFSHHLGRCVIML 466
>UNIPROTKB|F1MMS0 [details] [associations]
symbol:BRIP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0006357
GO:GO:0004003 TIGRFAMs:TIGR00604 GeneTree:ENSGT00530000063199
OMA:GVHKISD EMBL:DAAA02048371 IPI:IPI00923893
Ensembl:ENSBTAT00000061499 Uniprot:F1MMS0
Length = 1164
Score = 213 (80.0 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 61/224 (27%), Positives = 111/224 (49%)
Query: 467 EDGRILVTKNPEL--SKSHIKYI---LLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQ 521
+ G ++++KN + K+ ++ + LNPA F+DI +I++ GT+ P+ F +
Sbjct: 502 DHGLLILSKNKKRLRQKAAVRVLNFWCLNPAVAFSDINGKVWAIVLTSGTLSPMKSFSSE 561
Query: 522 LFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTI 581
L GV + HVI + + SGP R TF++ + E+ +
Sbjct: 562 L----GVTFTI--QLEANHVINNSQVWVGTIGSGPKGRSLCATFQHTETFEFQDEVGALL 615
Query: 582 TNLCTIVPKGMVCFFPSYDY-EAIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKV 640
++C + +G++CF PSY E + ++ + + K +V + + + D++
Sbjct: 616 LSVCQTISQGILCFLPSYKLLEKLKERWLSTGLWYN--LELVKTVIVEPQGGEKIDFDEL 673
Query: 641 LSDYGTSV----EKGGALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
L Y ++ EK GAL+++V GK+SEGL+FSDD R VV +
Sbjct: 674 LQMYYDAIKYKGEKDGALLVAVCRGKVSEGLDFSDDNARAVVTI 717
Score = 138 (53.6 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 36/138 (26%), Positives = 67/138 (48%)
Query: 257 EDGRILVTKNPEL--SKSHIKYI---LLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQ 311
+ G ++++KN + K+ ++ + LNPA F+DI +I++ GT+ P+ F +
Sbjct: 502 DHGLLILSKNKKRLRQKAAVRVLNFWCLNPAVAFSDINGKVWAIVLTSGTLSPMKSFSSE 561
Query: 312 LFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTI 371
L GV + HVI + + SGP R TF++ + E+ +
Sbjct: 562 L----GVTFTI--QLEANHVINNSQVWVGTIGSGPKGRSLCATFQHTETFEFQDEVGALL 615
Query: 372 TNLCTIVPKGMVCFFPSY 389
++C + +G++CF PSY
Sbjct: 616 LSVCQTISQGILCFLPSY 633
>UNIPROTKB|B4M891 [details] [associations]
symbol:GJ16649 "Regulator of telomere elongation helicase 1
homolog" species:7244 "Drosophila virilis" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 EMBL:CH940653 GO:GO:0010569 eggNOG:COG1199
TIGRFAMs:TIGR00604 KO:K11136 OMA:PFPPLKD OrthoDB:EOG4S4MX7
RefSeq:XP_002056881.1 EnsemblMetazoa:FBtr0232574 GeneID:6633257
KEGG:dvi:Dvir_GJ16649 FlyBase:FBgn0203833 InParanoid:B4M891
Uniprot:B4M891
Length = 1005
Score = 211 (79.3 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 57/220 (25%), Positives = 105/220 (47%)
Query: 463 VNKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQ-DARSIIVAGGTMEPVSEFKDQ 521
+ K + VTK ++ I + NP ++ RS+I+ GT+ P+
Sbjct: 437 LGKGNNAASSVTKAAKI----INFWCFNPGFGMEQLLNAHVRSVILTSGTLAPLKP---- 488
Query: 522 LFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTI 581
L L +P ++ H H++ + + I+ +GP + ++NR + + TI
Sbjct: 489 LIAELAIPVAQ--HLENPHIVDRSQVYVKIIGTGPDREQLISNYKNRDNPKYISSLGQTI 546
Query: 582 TNLCTIVPKGMVCFFPSYDYEAIVYNYMRDNHFIERI-ARIAKKKVVFREPKKTSEVDKV 640
N+ IVP G++ FFPSY + N D + A I+ +K +F EP+ +
Sbjct: 547 LNVSRIVPDGLLVFFPSYP----MLNQCVDAWQASGLWADISCRKPIFLEPRGKDQFTST 602
Query: 641 LSDYGTSV-EKGGALMLSVIGGKLSEGLNFSDDLGRCVVV 679
+ ++ ++ + GA ++V GK+SEGL+F+D GR V++
Sbjct: 603 MEEFYQAIRDSKGACFMAVCRGKVSEGLDFADRNGRAVII 642
Score = 138 (53.6 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 35/138 (25%), Positives = 63/138 (45%)
Query: 253 VNKNEDGRILVTKNPELSKSHIKYILLNPANHFTDIVQ-DARSIIVAGGTMEPVSEFKDQ 311
+ K + VTK ++ I + NP ++ RS+I+ GT+ P+
Sbjct: 437 LGKGNNAASSVTKAAKI----INFWCFNPGFGMEQLLNAHVRSVILTSGTLAPLKP---- 488
Query: 312 LFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTI 371
L L +P ++ H H++ + + I+ +GP + ++NR + + TI
Sbjct: 489 LIAELAIPVAQ--HLENPHIVDRSQVYVKIIGTGPDREQLISNYKNRDNPKYISSLGQTI 546
Query: 372 TNLCTIVPKGMVCFFPSY 389
N+ IVP G++ FFPSY
Sbjct: 547 LNVSRIVPDGLLVFFPSY 564
>UNIPROTKB|B4L1Z2 [details] [associations]
symbol:GI15901 "Regulator of telomere elongation helicase 1
homolog" species:7230 "Drosophila mojavensis" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0006281
GO:GO:0051539 GO:GO:0004003 GO:GO:0010569 TIGRFAMs:TIGR00604
EMBL:CH933810 KO:K11136 OrthoDB:EOG4S4MX7 RefSeq:XP_002010396.1
EnsemblMetazoa:FBtr0166626 GeneID:6584754 KEGG:dmo:Dmoj_GI15901
FlyBase:FBgn0138650 InParanoid:B4L1Z2 Uniprot:B4L1Z2
Length = 1014
Score = 211 (79.3 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 52/199 (26%), Positives = 97/199 (48%)
Query: 484 IKYILLNPANHFTDIVQ-DARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 542
I + NP ++ RS+I+ GT+ P+ L L +P ++ H H++
Sbjct: 455 INFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKP----LIAELAIPVAQ--HLENPHIV 508
Query: 543 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYE 602
+ + I+ +GP + ++NR + + TI N+ IVP G++ FFPSY
Sbjct: 509 DQSQVYVKIIGTGPDREQLISNYKNRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYP-- 566
Query: 603 AIVYNYMRDNHFIERI-ARIAKKKVVFREPKKTSEVDKVLSDYGTSV-EKGGALMLSVIG 660
+ N D + A ++ +K +F EP+ + + ++ ++ + GA ++V
Sbjct: 567 --MLNQCVDAWQASGLWADLSSRKPIFLEPRGKDQFTSTMEEFYQAIRDSKGACFMAVCR 624
Query: 661 GKLSEGLNFSDDLGRCVVV 679
GK+SEGL+F+D GR V++
Sbjct: 625 GKVSEGLDFADRNGRAVII 643
Score = 137 (53.3 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 31/117 (26%), Positives = 55/117 (47%)
Query: 274 IKYILLNPANHFTDIVQ-DARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 332
I + NP ++ RS+I+ GT+ P+ L L +P ++ H H++
Sbjct: 455 INFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKP----LIAELAIPVAQ--HLENPHIV 508
Query: 333 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSY 389
+ + I+ +GP + ++NR + + TI N+ IVP G++ FFPSY
Sbjct: 509 DQSQVYVKIIGTGPDREQLISNYKNRDNPKYISSLGQTILNVSRIVPDGLLVFFPSY 565
>UNIPROTKB|B4JNS2 [details] [associations]
symbol:GH24089 "Regulator of telomere elongation helicase 1
homolog" species:7222 "Drosophila grimshawi" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0006281
GO:GO:0051539 GO:GO:0004003 EMBL:CH916371 GO:GO:0010569
eggNOG:COG1199 TIGRFAMs:TIGR00604 KO:K11136 OMA:PFPPLKD
OrthoDB:EOG4S4MX7 RefSeq:XP_001992658.1 EnsemblMetazoa:FBtr0159503
GeneID:6565576 KEGG:dgr:Dgri_GH24089 FlyBase:FBgn0131545
InParanoid:B4JNS2 Uniprot:B4JNS2
Length = 986
Score = 210 (79.0 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 53/199 (26%), Positives = 97/199 (48%)
Query: 484 IKYILLNPANHFTDIVQD-ARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 542
I + NP ++ RS+I+ GT+ P+ L L +P ++ H H++
Sbjct: 455 INFWCFNPGFGMEQLLNTHVRSVILTSGTLAPLKP----LIAELAIPVAQ--HLENPHIV 508
Query: 543 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYE 602
+ + I+ +GP + ++NR + + TI N+ IVP G++ FFPSY
Sbjct: 509 NEAQVYVKIIGTGPDREQLISNYKNRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYP-- 566
Query: 603 AIVYNYMRDNHFIERI-ARIAKKKVVFREPKKTSEVDKVLSDYGTSV-EKGGALMLSVIG 660
+ N D + A I+ +K +F EP+ + + ++ ++ + GA ++V
Sbjct: 567 --MLNQCVDAWQASGLWADISSRKPIFLEPRGKDQFTSTMEEFYQAIRDSKGACFMAVCR 624
Query: 661 GKLSEGLNFSDDLGRCVVV 679
GK+SEGL+F+D GR V++
Sbjct: 625 GKVSEGLDFADRNGRAVII 643
Score = 134 (52.2 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 31/117 (26%), Positives = 55/117 (47%)
Query: 274 IKYILLNPANHFTDIVQD-ARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 332
I + NP ++ RS+I+ GT+ P+ L L +P ++ H H++
Sbjct: 455 INFWCFNPGFGMEQLLNTHVRSVILTSGTLAPLKP----LIAELAIPVAQ--HLENPHIV 508
Query: 333 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSY 389
+ + I+ +GP + ++NR + + TI N+ IVP G++ FFPSY
Sbjct: 509 NEAQVYVKIIGTGPDREQLISNYKNRDNPKYISSLGQTILNVSRIVPDGLLVFFPSY 565
>UNIPROTKB|F1MWN6 [details] [associations]
symbol:RTEL1 "Regulator of telomere elongation helicase 1"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004003 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 IPI:IPI00905335 EMBL:DAAA02036222
Ensembl:ENSBTAT00000052120 OMA:THEKEDE Uniprot:F1MWN6
Length = 564
Score = 205 (77.2 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 54/200 (27%), Positives = 95/200 (47%)
Query: 484 IKYILLNPANHFTDIV-QDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 542
+ Y +P + ++V Q R++I+ GT+ P++ F ++ + P HVI
Sbjct: 320 LSYWCFSPGHSMRELVRQGVRTLILTSGTLAPMASFSLEM--QIPFPVC----LENPHVI 373
Query: 543 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYE 602
+ I ++ GP + F+ R + L + ++N+ +VP G++ FFPSY
Sbjct: 374 NQHQIWVGVIPKGPDGAQLSSAFDRRFSDECLSSLGKVLSNISRVVPHGLLVFFPSYPVM 433
Query: 603 AIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDYGTSV---EKGGALMLSVI 659
+ R F ++ +K +F EP+ +V+ + V E GA+ L+V
Sbjct: 434 EKSLEFWRARDFTRKLE---VRKPLFVEPRSKGGFSEVMEAFYARVAAPESSGAIFLAVC 490
Query: 660 GGKLSEGLNFSDDLGRCVVV 679
GK SEGL+F+D GR V+V
Sbjct: 491 RGKASEGLDFADVNGRGVIV 510
Score = 133 (51.9 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 47/198 (23%), Positives = 85/198 (42%)
Query: 274 IKYILLNPANHFTDIV-QDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 332
+ Y +P + ++V Q R++I+ GT+ P++ F ++ + P HVI
Sbjct: 320 LSYWCFSPGHSMRELVRQGVRTLILTSGTLAPMASFSLEM--QIPFPVC----LENPHVI 373
Query: 333 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYE 392
+ I ++ GP + F+ R + L + ++N+ +VP G++ FFPSY
Sbjct: 374 NQHQIWVGVIPKGPDGAQLSSAFDRRFSDECLSSLGKVLSNISRVVPHGLLVFFPSY--- 430
Query: 393 AIVYNYMPDIEKTQEKPKLSGLQSFLKGVQENNPNLSKP-SEGGIEEAPSQVQEDQVRNP 451
P +EK+ E + + F + ++ P +P S+GG E +V P
Sbjct: 431 -------PVMEKSLEFWRA---RDFTRKLEVRKPLFVEPRSKGGFSEVMEAFYA-RVAAP 479
Query: 452 MLSVVTFLESLVNKNEDG 469
S FL K +G
Sbjct: 480 ESSGAIFLAVCRGKASEG 497
>UNIPROTKB|J9NVZ8 [details] [associations]
symbol:BRIP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00491
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004003 InterPro:IPR014001 SMART:SM00487 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 EMBL:AAEX03006594 EMBL:AAEX03006595
EMBL:AAEX03006596 Ensembl:ENSCAFT00000045493 Uniprot:J9NVZ8
Length = 1214
Score = 208 (78.3 bits), Expect = 7.6e-13, P = 7.6e-13
Identities = 61/206 (29%), Positives = 101/206 (49%)
Query: 484 IKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIP 543
+ + LNPA F+DI +I++ GT+ P+ F +L GV + HVI
Sbjct: 588 LNFWCLNPAVAFSDINGKVLTIVLTSGTLSPMKSFSSEL----GVTFTI--QLEANHVIN 641
Query: 544 KENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDY-E 602
+ + SGP R TF++ + E+ + ++C V +G++CF PSY E
Sbjct: 642 NSQVWVGTIGSGPKGRNLCATFQHTETFEFQDEVGALLLSVCQTVNQGILCFLPSYKLLE 701
Query: 603 AIVYNYMRDN--HFIERIARIAKKKVVFREPKKTSEVD--KVLSDYGTSV----EKGGAL 654
+ ++ H +E + K V EP+ + D ++L Y ++ EK GAL
Sbjct: 702 KLKERWLYTGLWHNLELV------KTVIVEPQGGEKTDFNELLQVYYDAIKYKGEKDGAL 755
Query: 655 MLSVIGGKLSEGLNFSDDLGRCVVVM 680
+++V GK+SEGL+FSDD R V+ +
Sbjct: 756 LVAVCRGKVSEGLDFSDDNARAVITI 781
Score = 135 (52.6 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 33/116 (28%), Positives = 55/116 (47%)
Query: 274 IKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIP 333
+ + LNPA F+DI +I++ GT+ P+ F +L GV + HVI
Sbjct: 588 LNFWCLNPAVAFSDINGKVLTIVLTSGTLSPMKSFSSEL----GVTFTI--QLEANHVIN 641
Query: 334 KENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSY 389
+ + SGP R TF++ + E+ + ++C V +G++CF PSY
Sbjct: 642 NSQVWVGTIGSGPKGRNLCATFQHTETFEFQDEVGALLLSVCQTVNQGILCFLPSY 697
>UNIPROTKB|E2RHN5 [details] [associations]
symbol:BRIP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0006357 GO:GO:0004003
InterPro:IPR014001 SMART:SM00487 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 OMA:GVHKISD EMBL:AAEX03006594
EMBL:AAEX03006595 EMBL:AAEX03006596 Ensembl:ENSCAFT00000028135
Uniprot:E2RHN5
Length = 1244
Score = 208 (78.3 bits), Expect = 7.9e-13, P = 7.9e-13
Identities = 61/206 (29%), Positives = 101/206 (49%)
Query: 484 IKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIP 543
+ + LNPA F+DI +I++ GT+ P+ F +L GV + HVI
Sbjct: 589 LNFWCLNPAVAFSDINGKVLTIVLTSGTLSPMKSFSSEL----GVTFTI--QLEANHVIN 642
Query: 544 KENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDY-E 602
+ + SGP R TF++ + E+ + ++C V +G++CF PSY E
Sbjct: 643 NSQVWVGTIGSGPKGRNLCATFQHTETFEFQDEVGALLLSVCQTVNQGILCFLPSYKLLE 702
Query: 603 AIVYNYMRDN--HFIERIARIAKKKVVFREPKKTSEVD--KVLSDYGTSV----EKGGAL 654
+ ++ H +E + K V EP+ + D ++L Y ++ EK GAL
Sbjct: 703 KLKERWLYTGLWHNLELV------KTVIVEPQGGEKTDFNELLQVYYDAIKYKGEKDGAL 756
Query: 655 MLSVIGGKLSEGLNFSDDLGRCVVVM 680
+++V GK+SEGL+FSDD R V+ +
Sbjct: 757 LVAVCRGKVSEGLDFSDDNARAVITI 782
Score = 135 (52.6 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 33/116 (28%), Positives = 55/116 (47%)
Query: 274 IKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIP 333
+ + LNPA F+DI +I++ GT+ P+ F +L GV + HVI
Sbjct: 589 LNFWCLNPAVAFSDINGKVLTIVLTSGTLSPMKSFSSEL----GVTFTI--QLEANHVIN 642
Query: 334 KENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSY 389
+ + SGP R TF++ + E+ + ++C V +G++CF PSY
Sbjct: 643 NSQVWVGTIGSGPKGRNLCATFQHTETFEFQDEVGALLLSVCQTVNQGILCFLPSY 698
>UNIPROTKB|D6RA96 [details] [associations]
symbol:RTEL1-TNFRSF6B "Protein RTEL1-TNFRSF6B" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 GO:GO:0005524
GO:GO:0003677 GO:GO:0004003 EMBL:AL121845 EMBL:AL353715
HOGENOM:HOG000007558 ProteinModelPortal:D6RA96 SMR:D6RA96
Ensembl:ENST00000492259 HGNC:HGNC:44095 ArrayExpress:D6RA96
Bgee:D6RA96 Uniprot:D6RA96
Length = 785
Score = 204 (76.9 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 58/200 (29%), Positives = 92/200 (46%)
Query: 484 IKYILLNPANHFTDIV-QDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 542
+ Y +P + ++V Q RS+I+ GT+ PVS F ++ + P H+I
Sbjct: 481 LSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEM--QIPFPVC----LENPHII 534
Query: 543 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYE 602
K I ++ GP + F+ R + L + + N+ +VP G++ FFPSY
Sbjct: 535 DKHQIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIARVVPYGLLIFFPSYPVM 594
Query: 603 AIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDYGTSVEK-G--GALMLSVI 659
+ R ++ + K +F EP+ + +S Y V G GA L+V
Sbjct: 595 EKSLEFWRARDLARKMEAL---KPLFVEPRSKGSFSETISAYYARVAAPGSTGATFLAVC 651
Query: 660 GGKLSEGLNFSDDLGRCVVV 679
GK SEGL+FSD GR V+V
Sbjct: 652 RGKASEGLDFSDTNGRGVIV 671
Score = 132 (51.5 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 50/198 (25%), Positives = 85/198 (42%)
Query: 274 IKYILLNPANHFTDIV-QDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 332
+ Y +P + ++V Q RS+I+ GT+ PVS F ++ + P H+I
Sbjct: 481 LSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEM--QIPFPVC----LENPHII 534
Query: 333 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYE 392
K I ++ GP + F+ R + L + + N+ +VP G++ FFPSY
Sbjct: 535 DKHQIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIARVVPYGLLIFFPSY--- 591
Query: 393 AIVYNYMPDIEKTQEKPKLSGLQSFLKGVQENNPNLSKP-SEGGIEEAPSQVQEDQVRNP 451
P +EK+ E + L ++ ++ P +P S+G E S +V P
Sbjct: 592 -------PVMEKSLEFWRARDLARKMEALK---PLFVEPRSKGSFSETISAYYA-RVAAP 640
Query: 452 MLSVVTFLESLVNKNEDG 469
+ TFL K +G
Sbjct: 641 GSTGATFLAVCRGKASEG 658
>UNIPROTKB|A4K436 [details] [associations]
symbol:RTEL1 "Regulator of telomere elongation helicase 1"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0000723 "telomere maintenance" evidence=ISS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 GO:GO:0000723
GO:GO:0010569 eggNOG:COG1199 TIGRFAMs:TIGR00604
HOGENOM:HOG000007558 KO:K11136 EMBL:DQ323152 EMBL:DQ323153
EMBL:DQ420360 EMBL:DQ420361 EMBL:DQ420362 EMBL:DQ420363
IPI:IPI00840795 IPI:IPI00905335 IPI:IPI00930023 IPI:IPI00930030
IPI:IPI00930035 RefSeq:NP_001091044.1 UniGene:Bt.6256
ProteinModelPortal:A4K436 GeneID:505721 KEGG:bta:505721 CTD:51750
InParanoid:A4K434 OrthoDB:EOG412M4Q NextBio:20867282 Uniprot:A4K436
Length = 1216
Score = 205 (77.2 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 54/200 (27%), Positives = 95/200 (47%)
Query: 484 IKYILLNPANHFTDIV-QDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 542
+ Y +P + ++V Q R++I+ GT+ P++ F ++ + P HVI
Sbjct: 451 LSYWCFSPGHSMRELVRQGVRTLILTSGTLAPMASFSLEM--QIPFPVC----LENPHVI 504
Query: 543 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYE 602
+ I ++ GP + F+ R + L + ++N+ +VP G++ FFPSY
Sbjct: 505 NQHQIWVGVIPKGPDGAQLSSAFDRRFSDECLSSLGKVLSNISRVVPHGLLVFFPSYPVM 564
Query: 603 AIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDYGTSV---EKGGALMLSVI 659
+ R F ++ +K +F EP+ +V+ + V E GA+ L+V
Sbjct: 565 EKSLEFWRARDFTRKLE---VRKPLFVEPRSKGGFSEVMEAFYARVAAPESSGAIFLAVC 621
Query: 660 GGKLSEGLNFSDDLGRCVVV 679
GK SEGL+F+D GR V+V
Sbjct: 622 RGKASEGLDFADVNGRGVIV 641
Score = 133 (51.9 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 47/198 (23%), Positives = 85/198 (42%)
Query: 274 IKYILLNPANHFTDIV-QDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 332
+ Y +P + ++V Q R++I+ GT+ P++ F ++ + P HVI
Sbjct: 451 LSYWCFSPGHSMRELVRQGVRTLILTSGTLAPMASFSLEM--QIPFPVC----LENPHVI 504
Query: 333 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYE 392
+ I ++ GP + F+ R + L + ++N+ +VP G++ FFPSY
Sbjct: 505 NQHQIWVGVIPKGPDGAQLSSAFDRRFSDECLSSLGKVLSNISRVVPHGLLVFFPSY--- 561
Query: 393 AIVYNYMPDIEKTQEKPKLSGLQSFLKGVQENNPNLSKP-SEGGIEEAPSQVQEDQVRNP 451
P +EK+ E + + F + ++ P +P S+GG E +V P
Sbjct: 562 -------PVMEKSLEFWRA---RDFTRKLEVRKPLFVEPRSKGGFSEVMEAFYA-RVAAP 610
Query: 452 MLSVVTFLESLVNKNEDG 469
S FL K +G
Sbjct: 611 ESSGAIFLAVCRGKASEG 628
>UNIPROTKB|Q9NZ71 [details] [associations]
symbol:RTEL1 "Regulator of telomere elongation helicase 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IMP] [GO:0000723 "telomere maintenance"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IMP] [GO:0010569 "regulation of double-strand
break repair via homologous recombination" evidence=IMP]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 EMBL:CH471077 GO:GO:0046872
GO:GO:0003677 GO:GO:0006281 GO:GO:0051539 GO:GO:0004003
EMBL:AF217796 GO:GO:0000723 GO:GO:0010569 eggNOG:COG1199
TIGRFAMs:TIGR00604 EMBL:AL353715 KO:K11136 CTD:51750
OrthoDB:EOG412M4Q EMBL:AF217795 EMBL:AB029011 EMBL:AK000485
EMBL:AK302508 EMBL:AK299332 EMBL:AK304798 EMBL:AL080127
IPI:IPI00219849 IPI:IPI00413900 IPI:IPI00718800 IPI:IPI00745153
IPI:IPI00929254 IPI:IPI00929311 IPI:IPI00929712 IPI:IPI00929751
PIR:T12516 PIR:T45294 RefSeq:NP_057518.1 RefSeq:NP_116575.3
UniGene:Hs.434878 ProteinModelPortal:Q9NZ71 SMR:Q9NZ71
IntAct:Q9NZ71 STRING:Q9NZ71 PhosphoSite:Q9NZ71 DMDM:229462743
PaxDb:Q9NZ71 PRIDE:Q9NZ71 GeneID:51750 KEGG:hsa:51750
UCSC:uc002yfu.2 UCSC:uc002yfx.1 UCSC:uc011abd.2 UCSC:uc021wge.1
GeneCards:GC20P062289 HGNC:HGNC:15888 MIM:608833 neXtProt:NX_Q9NZ71
PharmGKB:PA134915625 HOVERGEN:HBG108423 InParanoid:Q9NZ71
GenomeRNAi:51750 NextBio:55835 ArrayExpress:Q9NZ71 Bgee:Q9NZ71
Genevestigator:Q9NZ71 GermOnline:ENSG00000026036 Uniprot:Q9NZ71
Length = 1219
Score = 204 (76.9 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 58/200 (29%), Positives = 92/200 (46%)
Query: 484 IKYILLNPANHFTDIV-QDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 542
+ Y +P + ++V Q RS+I+ GT+ PVS F ++ + P H+I
Sbjct: 453 LSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEM--QIPFPVC----LENPHII 506
Query: 543 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYE 602
K I ++ GP + F+ R + L + + N+ +VP G++ FFPSY
Sbjct: 507 DKHQIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIARVVPYGLLIFFPSYPVM 566
Query: 603 AIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDYGTSVEK-G--GALMLSVI 659
+ R ++ + K +F EP+ + +S Y V G GA L+V
Sbjct: 567 EKSLEFWRARDLARKMEAL---KPLFVEPRSKGSFSETISAYYARVAAPGSTGATFLAVC 623
Query: 660 GGKLSEGLNFSDDLGRCVVV 679
GK SEGL+FSD GR V+V
Sbjct: 624 RGKASEGLDFSDTNGRGVIV 643
Score = 132 (51.5 bits), Expect = 0.00012, P = 0.00012
Identities = 50/198 (25%), Positives = 85/198 (42%)
Query: 274 IKYILLNPANHFTDIV-QDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 332
+ Y +P + ++V Q RS+I+ GT+ PVS F ++ + P H+I
Sbjct: 453 LSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEM--QIPFPVC----LENPHII 506
Query: 333 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYE 392
K I ++ GP + F+ R + L + + N+ +VP G++ FFPSY
Sbjct: 507 DKHQIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIARVVPYGLLIFFPSY--- 563
Query: 393 AIVYNYMPDIEKTQEKPKLSGLQSFLKGVQENNPNLSKP-SEGGIEEAPSQVQEDQVRNP 451
P +EK+ E + L ++ ++ P +P S+G E S +V P
Sbjct: 564 -------PVMEKSLEFWRARDLARKMEALK---PLFVEPRSKGSFSETISAYYA-RVAAP 612
Query: 452 MLSVVTFLESLVNKNEDG 469
+ TFL K +G
Sbjct: 613 GSTGATFLAVCRGKASEG 630
>UNIPROTKB|F6WH68 [details] [associations]
symbol:RTEL1 "Protein RTEL1-TNFRSF6B" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004003 EMBL:AL121845
TIGRFAMs:TIGR00604 EMBL:AL353715 HGNC:HGNC:15888 OMA:VLKMQFL
HGNC:HGNC:44095 IPI:IPI01021192 SMR:F6WH68 Ensembl:ENST00000318100
Ensembl:ENST00000482936 Uniprot:F6WH68
Length = 1400
Score = 204 (76.9 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 58/200 (29%), Positives = 92/200 (46%)
Query: 484 IKYILLNPANHFTDIV-QDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 542
+ Y +P + ++V Q RS+I+ GT+ PVS F ++ + P H+I
Sbjct: 453 LSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEM--QIPFPVC----LENPHII 506
Query: 543 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYE 602
K I ++ GP + F+ R + L + + N+ +VP G++ FFPSY
Sbjct: 507 DKHQIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIARVVPYGLLIFFPSYPVM 566
Query: 603 AIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDYGTSVEK-G--GALMLSVI 659
+ R ++ + K +F EP+ + +S Y V G GA L+V
Sbjct: 567 EKSLEFWRARDLARKMEAL---KPLFVEPRSKGSFSETISAYYARVAAPGSTGATFLAVC 623
Query: 660 GGKLSEGLNFSDDLGRCVVV 679
GK SEGL+FSD GR V+V
Sbjct: 624 RGKASEGLDFSDTNGRGVIV 643
Score = 132 (51.5 bits), Expect = 0.00014, P = 0.00014
Identities = 50/198 (25%), Positives = 85/198 (42%)
Query: 274 IKYILLNPANHFTDIV-QDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 332
+ Y +P + ++V Q RS+I+ GT+ PVS F ++ + P H+I
Sbjct: 453 LSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEM--QIPFPVC----LENPHII 506
Query: 333 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYE 392
K I ++ GP + F+ R + L + + N+ +VP G++ FFPSY
Sbjct: 507 DKHQIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIARVVPYGLLIFFPSY--- 563
Query: 393 AIVYNYMPDIEKTQEKPKLSGLQSFLKGVQENNPNLSKP-SEGGIEEAPSQVQEDQVRNP 451
P +EK+ E + L ++ ++ P +P S+G E S +V P
Sbjct: 564 -------PVMEKSLEFWRARDLARKMEALK---PLFVEPRSKGSFSETISAYYA-RVAAP 612
Query: 452 MLSVVTFLESLVNKNEDG 469
+ TFL K +G
Sbjct: 613 GSTGATFLAVCRGKASEG 630
>UNIPROTKB|B0W9F4 [details] [associations]
symbol:CPIJ003765 "Regulator of telomere elongation
helicase 1 homolog" species:7176 "Culex quinquefasciatus"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0010569 "regulation of double-strand break repair
via homologous recombination" evidence=ISS] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 GO:GO:0010569 eggNOG:COG1199 TIGRFAMs:TIGR00604
HOGENOM:HOG000007558 KO:K11136 OMA:PFPPLKD OrthoDB:EOG4S4MX7
EMBL:DS231864 RefSeq:XP_001845338.1 ProteinModelPortal:B0W9F4
EnsemblMetazoa:CPIJ003765-RA GeneID:6035102
KEGG:cqu:CpipJ_CPIJ003765 VectorBase:CPIJ003765 PhylomeDB:B0W9F4
Uniprot:B0W9F4
Length = 978
Score = 199 (75.1 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 58/211 (27%), Positives = 105/211 (49%)
Query: 484 IKYILLNPANHFTDIV-QDARSIIVAGGTMEPVSEFKDQLFGSLGVPES-RIHHFSCGHV 541
I + NP ++ ++ARSII+ GT+ P+ L L +P + ++ + H+
Sbjct: 464 INFWCFNPGFGMRQLLGRNARSIILTSGTLAPLKP----LISELDIPIAVKLEN---PHI 516
Query: 542 IPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDY 601
I + I+ GP + ++ NR + + TI + C I+P G++ FFPSY
Sbjct: 517 IDGSQVCVKIVGQGPDKESLNSSYGNRDNPKYISSLGRTILSFCPIIPGGLLVFFPSYP- 575
Query: 602 EAIVYNYMRDNHFIERI-ARIAKKKVVFREPKKTSEVDKVLSDYGTSVEK--G-GALMLS 657
+ N ++ I A+I++ K +F EP+ + +++Y + G GA+ ++
Sbjct: 576 ---LLNKCQEAWQETGIWAQISRTKPIFVEPRGKDQFLNTMTEYYAKINDPDGKGAVFMA 632
Query: 658 VIGGKLSEGLNFSDDLGR-CVVVMCNSNPLR 687
V GK+SEGL+F+D GR C++ PL+
Sbjct: 633 VCRGKVSEGLDFADMNGRACIITGLPFPPLK 663
>TAIR|locus:2016209 [details] [associations]
symbol:AT1G79950 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0007267 "cell-cell signaling" evidence=RCA] [GO:0009616 "virus
induced gene silencing" evidence=RCA] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA] [GO:0010014 "meristem initiation"
evidence=RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0016246 "RNA interference" evidence=RCA]
[GO:0035196 "production of miRNAs involved in gene silencing by
miRNA" evidence=RCA] InterPro:IPR003822 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020 EMBL:CP002684
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
TIGRFAMs:TIGR00604 Gene3D:1.20.1160.11 SUPFAM:SSF47762 KO:K11136
OMA:PFPPLKD IPI:IPI00530732 RefSeq:NP_178113.3 UniGene:At.34013
ProteinModelPortal:F4HQE2 SMR:F4HQE2 PRIDE:F4HQE2
EnsemblPlants:AT1G79950.1 GeneID:844335 KEGG:ath:AT1G79950
ArrayExpress:F4HQE2 Uniprot:F4HQE2
Length = 1040
Score = 198 (74.8 bits), Expect = 7.5e-12, P = 7.5e-12
Identities = 81/304 (26%), Positives = 138/304 (45%)
Query: 395 VYNYMPDIEKTQEK-PKLSGLQSFLKGVQENNPNLSKPSEGGIEEAPSQVQEDQVRNPML 453
+Y + + T E PKL G V+E L + + A S+++ + ML
Sbjct: 375 IYEMLKSLNITHETAPKLIGT------VEEAAVFLEEEKQRTATNAGSKLE---IIADML 425
Query: 454 SVVTFLESLVNKNEDGRILVTK----NPELSKSHIKYIL----LNPANHFTDIVQDA-RS 504
++ F E+ N + R+ V + + ++ K + L +P DI Q S
Sbjct: 426 KLI-FRENGSNHADVYRVHVQELEQNSTDVMKGKVSRTLSWWCFSPGITMLDIAQKGVGS 484
Query: 505 IIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLT 564
II+ GT+ P+ +L L P R+ + HVI + ++ +GP+ + +
Sbjct: 485 IILTSGTLSPMDSLAQEL--KLDFP-IRLEN---PHVISSNQLWAGVVSTGPSGYVLNSS 538
Query: 565 FENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDY--EAIVY--N--YMRDNHFIERI 618
+ NR + +E+ I N +VP+G++ FFPSY I + N Y ERI
Sbjct: 539 YRNRDVPEYKQELGNAIVNFSRVVPEGLLIFFPSYYLMDSCITFWKNGCYRNSMTVWERI 598
Query: 619 ARIAKKKVVFREPKKTSEVDKVLSDYGTSVEK---GGALMLSVIGGKLSEGLNFSDDLGR 675
++ KK V+ EPK +S + D+ ++ G + +V GK+SEGL+F+D GR
Sbjct: 599 CKL-KKPVI--EPKDSSLFPAAMRDFSEKLQDRATSGVVFFAVCRGKVSEGLDFADGAGR 655
Query: 676 CVVV 679
VV+
Sbjct: 656 AVVI 659
>POMBASE|SPAC1D4.12 [details] [associations]
symbol:rad15 "transcription factor TFIIH complex subunit
Rad15" species:4896 "Schizosaccharomyces pombe" [GO:0000112
"nucleotide-excision repair factor 3 complex" evidence=IGI]
[GO:0000439 "core TFIIH complex" evidence=ISO] [GO:0000717
"nucleotide-excision repair, DNA duplex unwinding" evidence=IGI]
[GO:0000991 "core RNA polymerase II binding transcription factor
activity" evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005675 "holo TFIIH complex" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=ISO]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
InterPro:IPR001945 InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR010643 InterPro:IPR014013
Pfam:PF06733 Pfam:PF06777 Pfam:PF13307 PRINTS:PR00852
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00488 SMART:SM00491
PomBase:SPAC1D4.12 INTERPRO:IPR013020 GO:GO:0005829 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0051539 GO:GO:0006367 GO:GO:0000991 GO:GO:0005675
eggNOG:COG1199 TIGRFAMs:TIGR00604 HOGENOM:HOG000205390 KO:K10844
OMA:KDVDGKC GO:GO:0043141 GO:GO:0000717 GO:GO:0000439 GO:GO:0000112
EMBL:X64583 EMBL:X60499 PIR:S22660 RefSeq:NP_593025.1
ProteinModelPortal:P26659 IntAct:P26659 STRING:P26659
EnsemblFungi:SPAC1D4.12.1 GeneID:2542203 KEGG:spo:SPAC1D4.12
OrthoDB:EOG4G1QQH NextBio:20803273 Uniprot:P26659
Length = 772
Score = 196 (74.1 bits), Expect = 8.1e-12, P = 8.1e-12
Identities = 73/276 (26%), Positives = 121/276 (43%)
Query: 416 SFLKGVQENNPNLSKPSEGGIEEAPSQVQEDQVR-----NPMLSVVTFLESLVNKNEDGR 470
SFL+ V++ KP E S V+ Q+ + + VV F +LV E G
Sbjct: 355 SFLQHVKDITFIDKKPLRFCAERLTSLVRALQISLVEDFHSLQQVVAFA-TLVATYERGF 413
Query: 471 ILV-----TKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGS 525
IL+ T+N + +++ L+ + + + RS+I+ GT+ P+ + L +
Sbjct: 414 ILILEPFETENATVPNPILRFSCLDASIAIKPVFERFRSVIITSGTLSPLDMYPKMLQFN 473
Query: 526 LGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLC 585
+ ES G + + LP+++ G FE R ++ +
Sbjct: 474 TVMQESY------GMSLARNCFLPMVVTRGSDQVAISSKFEARNDPSVVRNYGNILVEFS 527
Query: 586 TIVPKGMVCFFPSYDY-EAIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDY 644
I P G+V FFPSY Y E+IV ++ E + K K++ E E L Y
Sbjct: 528 KITPDGLVAFFPSYLYLESIVSSWQSMGILDE----VWKYKLILVETPDPHETTLALETY 583
Query: 645 GTSVEKG-GALMLSVIGGKLSEGLNFSDDLGRCVVV 679
+ G GA++LSV GK+SEG++F GR V++
Sbjct: 584 RAACSNGRGAVLLSVARGKVSEGVDFDHHYGRAVIM 619
Score = 126 (49.4 bits), Expect = 0.00031, P = 0.00031
Identities = 51/204 (25%), Positives = 88/204 (43%)
Query: 206 SFLKGVQENNPNLSKPPEGGIEEAPSQVQEDQVR-----NPMLSVVTFLESLVNKNEDGR 260
SFL+ V++ KP E S V+ Q+ + + VV F +LV E G
Sbjct: 355 SFLQHVKDITFIDKKPLRFCAERLTSLVRALQISLVEDFHSLQQVVAFA-TLVATYERGF 413
Query: 261 ILV-----TKNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGS 315
IL+ T+N + +++ L+ + + + RS+I+ GT+ P+ + L +
Sbjct: 414 ILILEPFETENATVPNPILRFSCLDASIAIKPVFERFRSVIITSGTLSPLDMYPKMLQFN 473
Query: 316 LGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLC 375
+ ES G + + LP+++ G FE R ++ +
Sbjct: 474 TVMQESY------GMSLARNCFLPMVVTRGSDQVAISSKFEARNDPSVVRNYGNILVEFS 527
Query: 376 TIVPKGMVCFFPSYDY-EAIVYNY 398
I P G+V FFPSY Y E+IV ++
Sbjct: 528 KITPDGLVAFFPSYLYLESIVSSW 551
>ZFIN|ZDB-GENE-050306-11 [details] [associations]
symbol:rtel1 "regulator of telomere elongation
helicase 1" species:7955 "Danio rerio" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0006139 "nucleobase-containing compound
metabolic process" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
ZFIN:ZDB-GENE-050306-11 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004003 InterPro:IPR014001 SMART:SM00487 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 KO:K11136 CTD:51750 EMBL:BX004876
IPI:IPI01016862 RefSeq:NP_001013328.2 UniGene:Dr.87074
ProteinModelPortal:F1QNW3 Ensembl:ENSDART00000123445 GeneID:503732
KEGG:dre:503732 NextBio:20866277 Bgee:F1QNW3 Uniprot:F1QNW3
Length = 1177
Score = 211 (79.3 bits), Expect = 9.6e-12, Sum P(2) = 9.6e-12
Identities = 57/200 (28%), Positives = 93/200 (46%)
Query: 484 IKYILLNPANHFTDIV-QDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 542
+ Y +P +++ Q+ R II+ GT+ P+S F ++ + P S HVI
Sbjct: 452 LSYWCFSPGFSMQELLRQEVRCIILTSGTLSPLSSFTCEM--QIPFPVS----LENPHVI 505
Query: 543 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYE 602
++ I I+ GP + F+ R + + + T+ NL +VP G++ FFPSY
Sbjct: 506 QRDQIFVSIIEKGPDGVQLSTAFDRRFVPENMSSMGNTLVNLSRVVPHGLLVFFPSYPVM 565
Query: 603 AIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDYGTSVE---KGGALMLSVI 659
+ R +RI + K +F EP+ +V+ Y V+ G +V
Sbjct: 566 DKTLEFWRAKGHADRIENV---KPMFVEPRGKGTFTEVIDGYYGKVDDPNSSGGSFFAVC 622
Query: 660 GGKLSEGLNFSDDLGRCVVV 679
GK SEGL+F+D GR VV+
Sbjct: 623 RGKASEGLDFADTYGRGVVI 642
Score = 138 (53.6 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 33/117 (28%), Positives = 57/117 (48%)
Query: 274 IKYILLNPANHFTDIV-QDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 332
+ Y +P +++ Q+ R II+ GT+ P+S F ++ + P S HVI
Sbjct: 452 LSYWCFSPGFSMQELLRQEVRCIILTSGTLSPLSSFTCEM--QIPFPVS----LENPHVI 505
Query: 333 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSY 389
++ I I+ GP + F+ R + + + T+ NL +VP G++ FFPSY
Sbjct: 506 QRDQIFVSIIEKGPDGVQLSTAFDRRFVPENMSSMGNTLVNLSRVVPHGLLVFFPSY 562
Score = 37 (18.1 bits), Expect = 9.6e-12, Sum P(2) = 9.6e-12
Identities = 10/48 (20%), Positives = 23/48 (47%)
Query: 334 KENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKG 381
+ N + + +C + + + + N + T KEI +I ++ +V G
Sbjct: 154 ESNHIKVHMCRAKVSSRSCIFYNNVDEKSTDKEIVNSILDVEDLVKTG 201
>UNIPROTKB|Q5RE34 [details] [associations]
symbol:RTEL1 "Regulator of telomere elongation helicase 1"
species:9601 "Pongo abelii" [GO:0000723 "telomere maintenance"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0010569 "regulation of double-strand
break repair via homologous recombination" evidence=ISS]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 GO:GO:0000723
GO:GO:0010569 TIGRFAMs:TIGR00604 KO:K11136 CTD:51750 EMBL:CR857704
RefSeq:NP_001124929.1 UniGene:Pab.2365 ProteinModelPortal:Q5RE34
GeneID:100171800 KEGG:pon:100171800 Uniprot:Q5RE34
Length = 1302
Score = 197 (74.4 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 58/200 (29%), Positives = 90/200 (45%)
Query: 484 IKYILLNPANHFTDIV-QDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 542
+ Y +P ++V Q RS+I+ GT+ PVS F ++ + P H+I
Sbjct: 454 LSYWCFSPGLSMRELVRQGVRSLILTSGTLAPVSSFALEM--QIPFPVC----LENPHII 507
Query: 543 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYE 602
K I ++ GP + F+ R + L + + N +VP G++ FFPSY
Sbjct: 508 DKHQIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNTARVVPCGLLIFFPSYPVM 567
Query: 603 AIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDYGTSVEK-G--GALMLSVI 659
+ R ++ + K +F EP+ + +S Y V G GA L+V
Sbjct: 568 EKSLEFWRARDLARKMEAL---KPLFVEPRSKGSFSETISAYYARVAAPGSTGATFLAVC 624
Query: 660 GGKLSEGLNFSDDLGRCVVV 679
GK SEGL+FSD GR V+V
Sbjct: 625 RGKASEGLDFSDTNGRGVIV 644
Score = 125 (49.1 bits), Expect = 0.00074, P = 0.00074
Identities = 50/198 (25%), Positives = 83/198 (41%)
Query: 274 IKYILLNPANHFTDIV-QDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 332
+ Y +P ++V Q RS+I+ GT+ PVS F ++ + P H+I
Sbjct: 454 LSYWCFSPGLSMRELVRQGVRSLILTSGTLAPVSSFALEM--QIPFPVC----LENPHII 507
Query: 333 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYE 392
K I ++ GP + F+ R + L + + N +VP G++ FFPSY
Sbjct: 508 DKHQIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNTARVVPCGLLIFFPSY--- 564
Query: 393 AIVYNYMPDIEKTQEKPKLSGLQSFLKGVQENNPNLSKP-SEGGIEEAPSQVQEDQVRNP 451
P +EK+ E + L ++ ++ P +P S+G E S +V P
Sbjct: 565 -------PVMEKSLEFWRARDLARKMEALK---PLFVEPRSKGSFSETISAYYA-RVAAP 613
Query: 452 MLSVVTFLESLVNKNEDG 469
+ TFL K +G
Sbjct: 614 GSTGATFLAVCRGKASEG 631
>MGI|MGI:2139369 [details] [associations]
symbol:Rtel1 "regulator of telomere elongation helicase 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000723 "telomere maintenance" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=IDA] [GO:0006139 "nucleobase-containing compound
metabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0010569 "regulation of double-strand break repair
via homologous recombination" evidence=ISO] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051536 "iron-sulfur cluster binding" evidence=IEA] [GO:0051539
"4 iron, 4 sulfur cluster binding" evidence=IEA] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 MGI:MGI:2139369
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0006281 GO:GO:0051539 GO:GO:0004003
InterPro:IPR014001 SMART:SM00487 GO:GO:0000723 GO:GO:0010569
eggNOG:COG1199 TIGRFAMs:TIGR00604 GeneTree:ENSGT00530000063199
KO:K11136 CTD:51750 EMBL:AY481619 EMBL:AY481620 EMBL:AY481621
EMBL:AY481622 EMBL:AY481623 EMBL:AK173097 EMBL:AK145145
EMBL:AL928965 EMBL:BC105578 EMBL:BC144977 EMBL:BC144978
EMBL:BC145658 IPI:IPI00274165 IPI:IPI00467288 IPI:IPI00754466
IPI:IPI00756345 IPI:IPI00756903 IPI:IPI00929860
RefSeq:NP_001001882.3 RefSeq:NP_001160137.1 RefSeq:NP_001160138.1
RefSeq:NP_001160139.1 RefSeq:NP_001160140.1 UniGene:Mm.11333
ProteinModelPortal:Q0VGM9 SMR:Q0VGM9 STRING:Q0VGM9
PhosphoSite:Q0VGM9 PRIDE:Q0VGM9 Ensembl:ENSMUST00000048608
Ensembl:ENSMUST00000054622 Ensembl:ENSMUST00000098971
Ensembl:ENSMUST00000108814 Ensembl:ENSMUST00000108815
Ensembl:ENSMUST00000148252 GeneID:269400 KEGG:mmu:269400
UCSC:uc008olu.2 UCSC:uc008olv.2 UCSC:uc008olw.2 UCSC:uc008olx.2
UCSC:uc012cmk.1 UCSC:uc012cml.1 InParanoid:Q6H1L3 OMA:VLKMQFL
ChiTaRS:RTEL1 NextBio:392832 Bgee:Q0VGM9 Genevestigator:Q0VGM9
Uniprot:Q0VGM9
Length = 1203
Score = 196 (74.1 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 55/201 (27%), Positives = 95/201 (47%)
Query: 484 IKYILLNPANHFTDIV-QDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 542
+ Y +P+ ++V Q R++I+ GT+ P+S F ++ + P H+I
Sbjct: 453 LSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEM--QIPFPVC----LENPHII 506
Query: 543 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYE 602
K + I+ GP + ++ R + L + ++N+ +VP G++ FFPSY
Sbjct: 507 DKNQLWVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVM 566
Query: 603 AIVYNYMRDNHFIERIAR-IAKKKVVFREPKKTSEVDKVLSDYGTSVEK---GGALMLSV 658
+ + ++ +AR + K +F EP+ +V+ Y V GA L+V
Sbjct: 567 EKSLEFWQ----VQGLARKVEALKPLFVEPRNKGSFSEVIDAYYQQVASPASNGATFLAV 622
Query: 659 IGGKLSEGLNFSDDLGRCVVV 679
GK SEGL+FSD GR V+V
Sbjct: 623 CRGKASEGLDFSDMNGRGVIV 643
Score = 140 (54.3 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 48/198 (24%), Positives = 88/198 (44%)
Query: 274 IKYILLNPANHFTDIV-QDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 332
+ Y +P+ ++V Q R++I+ GT+ P+S F ++ + P H+I
Sbjct: 453 LSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEM--QIPFPVC----LENPHII 506
Query: 333 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYE 392
K + I+ GP + ++ R + L + ++N+ +VP G++ FFPSY
Sbjct: 507 DKNQLWVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFPSY--- 563
Query: 393 AIVYNYMPDIEKTQEKPKLSGLQSFLKGVQENNPNLSKP-SEGGIEEAPSQVQEDQVRNP 451
P +EK+ E ++ GL + V+ P +P ++G E + QV +P
Sbjct: 564 -------PVMEKSLEFWQVQGLA---RKVEALKPLFVEPRNKGSFSEVIDAYYQ-QVASP 612
Query: 452 MLSVVTFLESLVNKNEDG 469
+ TFL K +G
Sbjct: 613 ASNGATFLAVCRGKASEG 630
>UNIPROTKB|Q6H1L8 [details] [associations]
symbol:Rtel1 "Regulator of telomere elongation helicase 1"
species:10096 "Mus spretus" [GO:0000723 "telomere maintenance"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0010569 "regulation of double-strand
break repair via homologous recombination" evidence=ISS]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 MGI:MGI:2139369
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0006281 GO:GO:0051539 GO:GO:0004003
GO:GO:0000723 GO:GO:0010569 TIGRFAMs:TIGR00604 EMBL:AY481613
EMBL:AY481614 EMBL:AY481615 EMBL:AY481616 EMBL:AY481617
EMBL:AY530632 ProteinModelPortal:Q6H1L8 Uniprot:Q6H1L8
Length = 1203
Score = 195 (73.7 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 56/201 (27%), Positives = 94/201 (46%)
Query: 484 IKYILLNPANHFTDIV-QDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 542
+ Y +P+ ++V Q R++I+ GT+ P+S F L + P H+I
Sbjct: 453 LSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFA--LEKQIPFPVC----LENPHII 506
Query: 543 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYE 602
K + I+ GP + ++ R + L + ++N+ +VP G++ FFPSY
Sbjct: 507 DKNQLWVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVM 566
Query: 603 AIVYNYMRDNHFIERIAR-IAKKKVVFREPKKTSEVDKVLSDYGTSVEK---GGALMLSV 658
+ + ++ +AR + K +F EP+ +V+ Y V GA L+V
Sbjct: 567 EKSLEFWQ----VQGLARKVEALKPLFVEPRNKGSFSEVIDAYYQQVASPASNGATFLAV 622
Query: 659 IGGKLSEGLNFSDDLGRCVVV 679
GK SEGL+FSD GR V+V
Sbjct: 623 CRGKASEGLDFSDMNGRGVIV 643
Score = 139 (54.0 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 49/198 (24%), Positives = 87/198 (43%)
Query: 274 IKYILLNPANHFTDIV-QDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 332
+ Y +P+ ++V Q R++I+ GT+ P+S F L + P H+I
Sbjct: 453 LSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFA--LEKQIPFPVC----LENPHII 506
Query: 333 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYE 392
K + I+ GP + ++ R + L + ++N+ +VP G++ FFPSY
Sbjct: 507 DKNQLWVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFPSY--- 563
Query: 393 AIVYNYMPDIEKTQEKPKLSGLQSFLKGVQENNPNLSKP-SEGGIEEAPSQVQEDQVRNP 451
P +EK+ E ++ GL + V+ P +P ++G E + QV +P
Sbjct: 564 -------PVMEKSLEFWQVQGLA---RKVEALKPLFVEPRNKGSFSEVIDAYYQ-QVASP 612
Query: 452 MLSVVTFLESLVNKNEDG 469
+ TFL K +G
Sbjct: 613 ASNGATFLAVCRGKASEG 630
>UNIPROTKB|E2RLA6 [details] [associations]
symbol:RTEL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004003 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 OMA:VLKMQFL EMBL:AAEX03014162
EMBL:AAEX03014163 Ensembl:ENSCAFT00000020689 Uniprot:E2RLA6
Length = 1232
Score = 195 (73.7 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 58/200 (29%), Positives = 92/200 (46%)
Query: 484 IKYILLNPANHFTDIVQDA-RSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 542
+ Y +P + +VQ R++I+ GT+ PVS F ++ + P HVI
Sbjct: 452 LSYWCFSPGHSMRQLVQQGVRTVILTSGTLAPVSSFALEM--QIPFPVC----LENPHVI 505
Query: 543 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYE 602
++ I I+ GP + F+ R L + + N+ +VP G++ FFPSY
Sbjct: 506 HQQQIWVGIVSRGPDGAQLSSAFDKRFSEACLSSLGKALGNIARVVPHGLLVFFPSYPVL 565
Query: 603 AIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDYGTSVE-KG--GALMLSVI 659
+ R H + ++ K VF EP+ +V+ Y V G GA L+V
Sbjct: 566 ERSLQFWR-TH--DSAGKLEALKPVFVEPRNKGGFSEVVDAYYARVACPGSTGATFLAVC 622
Query: 660 GGKLSEGLNFSDDLGRCVVV 679
GK SEGL+F+D GR V++
Sbjct: 623 RGKASEGLDFADMNGRGVII 642
Score = 127 (49.8 bits), Expect = 0.00042, P = 0.00042
Identities = 32/117 (27%), Positives = 54/117 (46%)
Query: 274 IKYILLNPANHFTDIVQDA-RSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 332
+ Y +P + +VQ R++I+ GT+ PVS F ++ + P HVI
Sbjct: 452 LSYWCFSPGHSMRQLVQQGVRTVILTSGTLAPVSSFALEM--QIPFPVC----LENPHVI 505
Query: 333 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSY 389
++ I I+ GP + F+ R L + + N+ +VP G++ FFPSY
Sbjct: 506 HQQQIWVGIVSRGPDGAQLSSAFDKRFSEACLSSLGKALGNIARVVPHGLLVFFPSY 562
>UNIPROTKB|D4ACH4 [details] [associations]
symbol:Rtel1 "Regulator of telomere elongation helicase 1"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR006935 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF04851 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004003 TIGRFAMs:TIGR00604
IPI:IPI00781945 Ensembl:ENSRNOT00000029336 ArrayExpress:D4ACH4
Uniprot:D4ACH4
Length = 1165
Score = 193 (73.0 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 52/200 (26%), Positives = 93/200 (46%)
Query: 484 IKYILLNPANHFTDIVQDA-RSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 542
+ Y +P++ ++VQ R++I+ GT+ P+S F ++ + P H+I
Sbjct: 453 LSYWCFSPSHSMRELVQQGVRTLILTSGTLAPLSSFALEM--QIPFPVC----LENPHII 506
Query: 543 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYE 602
K + ++ GP + ++ R + L + + N+ +VP G++ FFPSY
Sbjct: 507 DKNQLWVGVIPRGPDGVQLSSAYDKRFSEECLSSLGKALGNIARVVPHGLLVFFPSYPVM 566
Query: 603 AIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDYGTSVEK---GGALMLSVI 659
+ + +++ + K +F EP+ +V+ Y V GA L+V
Sbjct: 567 EKSLEFWQAQGMSKKVEAL---KPLFVEPRNKGSFSEVIDAYYQQVASPGSNGATFLAVC 623
Query: 660 GGKLSEGLNFSDDLGRCVVV 679
GK SEGL+FSD GR V+V
Sbjct: 624 RGKASEGLDFSDMNGRGVIV 643
Score = 137 (53.3 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 47/198 (23%), Positives = 87/198 (43%)
Query: 274 IKYILLNPANHFTDIVQDA-RSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 332
+ Y +P++ ++VQ R++I+ GT+ P+S F ++ + P H+I
Sbjct: 453 LSYWCFSPSHSMRELVQQGVRTLILTSGTLAPLSSFALEM--QIPFPVC----LENPHII 506
Query: 333 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYE 392
K + ++ GP + ++ R + L + + N+ +VP G++ FFPSY
Sbjct: 507 DKNQLWVGVIPRGPDGVQLSSAYDKRFSEECLSSLGKALGNIARVVPHGLLVFFPSY--- 563
Query: 393 AIVYNYMPDIEKTQEKPKLSGLQSFLKGVQENNPNLSKP-SEGGIEEAPSQVQEDQVRNP 451
P +EK+ E + G+ K V+ P +P ++G E + QV +P
Sbjct: 564 -------PVMEKSLEFWQAQGMS---KKVEALKPLFVEPRNKGSFSEVIDAYYQ-QVASP 612
Query: 452 MLSVVTFLESLVNKNEDG 469
+ TFL K +G
Sbjct: 613 GSNGATFLAVCRGKASEG 630
Score = 38 (18.4 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 605 VYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLS 642
V +Y+ D H A + R K+ ++DKVL+
Sbjct: 1008 VNDYLSDVHKALGSASCNQLTAALRAYKQDDDLDKVLA 1045
>RGD|1306721 [details] [associations]
symbol:Rtel1 "regulator of telomere elongation helicase 1"
species:10116 "Rattus norvegicus" [GO:0000723 "telomere
maintenance" evidence=ISO;ISS] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=IEA;ISO;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISO;ISS] [GO:0005634 "nucleus" evidence=IEA;ISO;ISS]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0010569 "regulation of
double-strand break repair via homologous recombination"
evidence=ISO;ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR006935
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF04851 Pfam:PF06733
Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 RGD:1306721 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0006281
GO:GO:0051539 GO:GO:0004003 GO:GO:0000723 GO:GO:0010569
eggNOG:COG1199 TIGRFAMs:TIGR00604 EMBL:CH474066
HOGENOM:HOG000007558 KO:K11136 CTD:51750 OrthoDB:EOG412M4Q
EMBL:BC086436 IPI:IPI00781945 IPI:IPI00782143 RefSeq:NP_001178786.1
UniGene:Rn.98315 PRIDE:Q5RJZ1 GeneID:362288 KEGG:rno:362288
UCSC:RGD:1306721 NextBio:679364 ArrayExpress:Q5RJZ1
Genevestigator:Q5RJZ1 Uniprot:Q5RJZ1
Length = 1274
Score = 193 (73.0 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 52/200 (26%), Positives = 93/200 (46%)
Query: 484 IKYILLNPANHFTDIVQDA-RSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 542
+ Y +P++ ++VQ R++I+ GT+ P+S F ++ + P H+I
Sbjct: 453 LSYWCFSPSHSMRELVQQGVRTLILTSGTLAPLSSFALEM--QIPFPVC----LENPHII 506
Query: 543 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYE 602
K + ++ GP + ++ R + L + + N+ +VP G++ FFPSY
Sbjct: 507 DKNQLWVGVIPRGPDGVQLSSAYDKRFSEECLSSLGKALGNIARVVPHGLLVFFPSYPVM 566
Query: 603 AIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDYGTSVEK---GGALMLSVI 659
+ + +++ + K +F EP+ +V+ Y V GA L+V
Sbjct: 567 EKSLEFWQAQGMSKKVEAL---KPLFVEPRNKGSFSEVIDAYYQQVASPGSNGATFLAVC 623
Query: 660 GGKLSEGLNFSDDLGRCVVV 679
GK SEGL+FSD GR V+V
Sbjct: 624 RGKASEGLDFSDMNGRGVIV 643
Score = 137 (53.3 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 47/198 (23%), Positives = 87/198 (43%)
Query: 274 IKYILLNPANHFTDIVQDA-RSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI 332
+ Y +P++ ++VQ R++I+ GT+ P+S F ++ + P H+I
Sbjct: 453 LSYWCFSPSHSMRELVQQGVRTLILTSGTLAPLSSFALEM--QIPFPVC----LENPHII 506
Query: 333 PKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYE 392
K + ++ GP + ++ R + L + + N+ +VP G++ FFPSY
Sbjct: 507 DKNQLWVGVIPRGPDGVQLSSAYDKRFSEECLSSLGKALGNIARVVPHGLLVFFPSY--- 563
Query: 393 AIVYNYMPDIEKTQEKPKLSGLQSFLKGVQENNPNLSKP-SEGGIEEAPSQVQEDQVRNP 451
P +EK+ E + G+ K V+ P +P ++G E + QV +P
Sbjct: 564 -------PVMEKSLEFWQAQGMS---KKVEALKPLFVEPRNKGSFSEVIDAYYQ-QVASP 612
Query: 452 MLSVVTFLESLVNKNEDG 469
+ TFL K +G
Sbjct: 613 GSNGATFLAVCRGKASEG 630
Score = 38 (18.4 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 605 VYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLS 642
V +Y+ D H A + R K+ ++DKVL+
Sbjct: 1057 VNDYLSDVHKALGSASCNQLTAALRAYKQDDDLDKVLA 1094
>UNIPROTKB|Q16X92 [details] [associations]
symbol:AAEL008960 "Regulator of telomere elongation
helicase 1 homolog" species:7159 "Aedes aegypti" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 GO:GO:0010569 eggNOG:COG1199 TIGRFAMs:TIGR00604
EMBL:CH477545 RefSeq:XP_001653621.1 UniGene:Aae.7622
ProteinModelPortal:Q16X92 PRIDE:Q16X92 EnsemblMetazoa:AAEL008960-RA
GeneID:5571306 KEGG:aag:AaeL_AAEL008960 VectorBase:AAEL008960
HOGENOM:HOG000007558 KO:K11136 OMA:PFPPLKD OrthoDB:EOG4S4MX7
PhylomeDB:Q16X92 Uniprot:Q16X92
Length = 1010
Score = 204 (76.9 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 57/202 (28%), Positives = 102/202 (50%)
Query: 484 IKYILLNPANHFTDIV-QDARSIIVAGGTMEPVSEFKDQLFGSLGVPES-RIHHFSCGHV 541
+ + NP ++ ++ARSII+ GT+ P+ L L +P + R+ + H+
Sbjct: 462 VSFWCFNPGFGMRQLLGRNARSIILTSGTLAPLKP----LISELDIPIAVRLEN---PHI 514
Query: 542 IPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDY 601
I + I+ GP + ++ NR + + TI + C I+P G++ FFPSY
Sbjct: 515 IDGSQVCVKIVGQGPDKESLNSSYGNRDNPKYISSLGRTILSFCPIIPGGLLVFFPSYP- 573
Query: 602 EAIVYNYMRDNHFIERI-ARIAKKKVVFREPKKTSEVDKVLSDYGTSVEK--G-GALMLS 657
+ N ++ I A+I++ K +F EP+ + +S+Y + G GA+ ++
Sbjct: 574 ---LLNKCQEAWQETGIWAQISRTKPIFVEPRGKDQFLNTMSEYYQKINDPDGKGAVFMA 630
Query: 658 VIGGKLSEGLNFSDDLGRCVVV 679
V GK+SEGL+F+D GR V++
Sbjct: 631 VCRGKVSEGLDFADMNGRAVII 652
Score = 130 (50.8 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 32/118 (27%), Positives = 57/118 (48%)
Query: 274 IKYILLNPANHFTDIV-QDARSIIVAGGTMEPVSEFKDQLFGSLGVPES-RIHHFSCGHV 331
+ + NP ++ ++ARSII+ GT+ P+ L L +P + R+ + H+
Sbjct: 462 VSFWCFNPGFGMRQLLGRNARSIILTSGTLAPLKP----LISELDIPIAVRLEN---PHI 514
Query: 332 IPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSY 389
I + I+ GP + ++ NR + + TI + C I+P G++ FFPSY
Sbjct: 515 IDGSQVCVKIVGQGPDKESLNSSYGNRDNPKYISSLGRTILSFCPIIPGGLLVFFPSY 572
Score = 43 (20.2 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 13/55 (23%), Positives = 27/55 (49%)
Query: 408 KPKLSGLQSFLKGVQENNPNLSKPSEGGIEEAPSQVQEDQVRNPMLSVVTFLESL 462
K KL +++ ++ +N S E+APSQ ++ +N + + T + S+
Sbjct: 799 KRKLDDIRNNFVQIENSNQVTSTFRISDYEQAPSQSASNEPKNFLSRLNTQVHSI 853
Score = 37 (18.1 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 13/39 (33%), Positives = 17/39 (43%)
Query: 370 TITNLCTIVPKGMVCFFPSY-----DYEAIVYNYMPDIE 403
T TNLC + C F S + +V N + DIE
Sbjct: 170 TKTNLCKAKVQSRTCSFYSRVESCKERPEVVSNVIMDIE 208
>DICTYBASE|DDB_G0267414 [details] [associations]
symbol:repD "transcription factor IIH component"
species:44689 "Dictyostelium discoideum" [GO:0006974 "response to
DNA damage stimulus" evidence=IEA;IEP] [GO:0043141 "ATP-dependent
5'-3' DNA helicase activity" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0006289 "nucleotide-excision repair" evidence=IEA;ISS]
[GO:0005675 "holo TFIIH complex" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0000287 "magnesium ion binding"
evidence=ISS] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000443 "SSL2-core TFIIH complex portion
of holo TFIIH complex" evidence=ISS] [GO:0000442 "SSL2-core TFIIH
complex portion of NEF3 complex" evidence=ISS] [GO:0051539 "4 iron,
4 sulfur cluster binding" evidence=IEA] [GO:0051536 "iron-sulfur
cluster binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001945 InterPro:IPR002464
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR010643 InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777
Pfam:PF13307 PRINTS:PR00852 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 dictyBase:DDB_G0267414
INTERPRO:IPR013020 GO:GO:0005524 GenomeReviews:CM000150_GR
GO:GO:0006355 GO:GO:0000287 GO:GO:0003677 EMBL:AAFI02000003
GO:GO:0051539 GO:GO:0006366 GO:GO:0006289 eggNOG:COG1199
TIGRFAMs:TIGR00604 KO:K10844 OMA:KDVDGKC EMBL:U77066
RefSeq:XP_647302.1 ProteinModelPortal:Q55G81 STRING:Q55G81
EnsemblProtists:DDB0191272 GeneID:8616111 KEGG:ddi:DDB_G0267414
ProtClustDB:CLSZ2431526 GO:GO:0000443 GO:GO:0000442 GO:GO:0043141
Uniprot:Q55G81
Length = 776
Score = 189 (71.6 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 57/234 (24%), Positives = 107/234 (45%)
Query: 453 LSVVTFLESLVNKNEDGRILVTKNPELSKSH------IKYILLNPANHFTDIVQDARSII 506
+S++ +LV +G +++ + P + + ++ L+ + I RS++
Sbjct: 390 ISLIADFATLVGTYNNGFLIIIE-PYYQRQNNTYDQIFQFCCLDASIGMKPIFDKYRSVV 448
Query: 507 VAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFE 566
+ GT+ P+ + L V E R+ S + + I P IL G F+
Sbjct: 449 ITSGTLSPLDIYTKMLNFRPTVVE-RLT-MS----LNRNCICPCILTRGSDQISISTKFD 502
Query: 567 NRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYEAIVYNYMRDNHFIERIARIAKKKV 626
R+ ++ + + IVP G++CFF SY Y + + + + I K+
Sbjct: 503 VRSDTAVVRNYGALLVEVSAIVPDGIICFFTSYSYMEQIVSVWNEMGLLNNILT---NKL 559
Query: 627 VFREPKKTSEVDKVLSDYGTSVEKG-GALMLSVIGGKLSEGLNFSDDLGRCVVV 679
+F E +E L +Y + + G GA++LSV GK+SEG++F + GRCV++
Sbjct: 560 IFVETSDPAESALALQNYKKACDSGRGAVLLSVARGKVSEGIDFDNQYGRCVIL 613
>UNIPROTKB|Q91941 [details] [associations]
symbol:ERCC2/XPD "ERCC2/XPD protein" species:8083
"Xiphophorus maculatus" [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=ISS] [GO:0006917 "induction of
apoptosis" evidence=ISS] [GO:0043139 "5'-3' DNA helicase activity"
evidence=ISS] InterPro:IPR001945 InterPro:IPR002464
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR010643 InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777
Pfam:PF13307 PRINTS:PR00852 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0006917 GO:GO:0003677 GO:GO:0004003
GO:GO:0006283 TIGRFAMs:TIGR00604 GO:GO:0043139 HOVERGEN:HBG051498
EMBL:U17896 PIR:I51720 ProteinModelPortal:Q91941 Uniprot:Q91941
Length = 760
Score = 188 (71.2 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
Identities = 55/208 (26%), Positives = 98/208 (47%)
Query: 475 KNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQL-FGSLGVPESRI 533
+ P ++ + + ++P+ + Q +S+I+ GT+ P+ + L F + +
Sbjct: 424 RTPTIANPVLHFSCMDPSIAIKPVFQRFQSVIITSGTLSPLDIYPRILDFRPVTMAS--- 480
Query: 534 HHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMV 593
F+ + + + PLI+ G FE R ++ + + +VP G+V
Sbjct: 481 --FTM--TLARTCLCPLIVGRGNDQVALSSKFETREDFAVIRNYGNLLLEMSAVVPDGIV 536
Query: 594 CFFPSYDY-EAIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDYGTSVEKG- 651
FF SY Y E IV ++ +E I K K++F E + +E L Y + E G
Sbjct: 537 AFFTSYVYMENIVASWYEQG-ILENIQ---KNKLIFIETQDAAETSMALEKYQEACENGR 592
Query: 652 GALMLSVIGGKLSEGLNFSDDLGRCVVV 679
GA++LSV GK+SEG++F GR V++
Sbjct: 593 GAILLSVARGKVSEGIDFVHHFGRAVIM 620
Score = 48 (22.0 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
Identities = 10/27 (37%), Positives = 19/27 (70%)
Query: 380 KGMVCFFPSYDY-EAIVYNYMPDIEKT 405
+G++ +FP YDY Y+YM ++++T
Sbjct: 6 EGLLVYFP-YDYIYPEQYSYMLELKRT 31
>SGD|S000000973 [details] [associations]
symbol:RAD3 "5' to 3' DNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0000439 "core TFIIH complex"
evidence=IDA] [GO:0005675 "holo TFIIH complex" evidence=IDA]
[GO:0070816 "phosphorylation of RNA polymerase II C-terminal
domain" evidence=IDA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] [GO:0000990 "core RNA polymerase
binding transcription factor activity" evidence=IC] [GO:0000112
"nucleotide-excision repair factor 3 complex" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051536
"iron-sulfur cluster binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0010525 "regulation of transposition,
RNA-mediated" evidence=IMP] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=IDA] [GO:0000019 "regulation of mitotic
recombination" evidence=IMP] [GO:0003684 "damaged DNA binding"
evidence=IDA] [GO:0033683 "nucleotide-excision repair, DNA
incision" evidence=IDA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] InterPro:IPR001945
InterPro:IPR002464 InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR010643 InterPro:IPR014013
Pfam:PF06733 Pfam:PF06777 Pfam:PF13307 PRINTS:PR00852
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00488 SMART:SM00491
SGD:S000000973 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0046872
GO:GO:0003684 GO:GO:0051539 GO:GO:0006366 EMBL:BK006939 EMBL:U18922
RefSeq:NP_011098.3 GeneID:856918 KEGG:sce:YER171W GO:GO:0070816
GO:GO:0005675 eggNOG:COG1199 TIGRFAMs:TIGR00604
HOGENOM:HOG000205390 KO:K10844 OMA:KDVDGKC GO:GO:0033683
GO:GO:0043141 GeneTree:ENSGT00550000075092 GO:GO:0000439
GO:GO:0000112 GO:GO:0010525 GO:GO:0000019 OrthoDB:EOG4G1QQH
EMBL:X02368 EMBL:K03293 PIR:A23308 RefSeq:NP_011102.3
ProteinModelPortal:P06839 DIP:DIP-2425N IntAct:P06839
MINT:MINT-617451 STRING:P06839 PaxDb:P06839 PeptideAtlas:P06839
EnsemblFungi:YER171W GeneID:856922 KEGG:sce:YER175C CYGD:YER171w
NextBio:983374 Genevestigator:P06839 GermOnline:YER171W
Uniprot:P06839
Length = 778
Score = 192 (72.6 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 57/245 (23%), Positives = 109/245 (44%)
Query: 442 QVQEDQVRNPMLSVVTFLESLVNKNEDGRILVTKNPELSKSHI-----KYILLNPANHFT 496
+V E + + + TF +L++ E+G +L+ + E+ + + ++ L+ +
Sbjct: 389 EVTEVEDFTALKDIATFA-TLISTYEEGFLLIIEPYEIENAAVPNPIMRFTCLDASIAIK 447
Query: 497 DIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGP 556
+ + S+I+ GT+ P+ + L + +S + K++ LP+I+ G
Sbjct: 448 PVFERFSSVIITSGTISPLDMYPRMLNFKTVLQKSY------AMTLAKKSFLPMIITKGS 501
Query: 557 TNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYEAIVYNYMRDNHFIE 616
FE R ++ + I P GMV FFPSY Y + + + ++
Sbjct: 502 DQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVVFFPSYLYMESIVSMWQTMGILD 561
Query: 617 RIARIAKKKVVFREPKKTSEVDKVLSDYGTSVEKG-GALMLSVIGGKLSEGLNFSDDLGR 675
+ K K++ E E L Y + G GA++LSV GK+SEG++F GR
Sbjct: 562 EVW---KHKLILVETPDAQETSLALETYRKACSNGRGAILLSVARGKVSEGIDFDHQYGR 618
Query: 676 CVVVM 680
V+++
Sbjct: 619 TVLMI 623
Score = 43 (20.2 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 8/10 (80%), Positives = 9/10 (90%)
Query: 396 YNYMPDIEKT 405
YNYM DI+KT
Sbjct: 22 YNYMCDIKKT 31
>FB|FBgn0261850 [details] [associations]
symbol:Xpd "Xeroderma pigmentosum D" species:7227 "Drosophila
melanogaster" [GO:0006289 "nucleotide-excision repair"
evidence=ISS;IDA] [GO:0001113 "transcriptional open complex
formation at RNA polymerase II promoter" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=ISS;IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005675 "holo TFIIH complex"
evidence=ISS] [GO:0009411 "response to UV" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005703 "polytene
chromosome puff" evidence=IDA] [GO:0000439 "core TFIIH complex"
evidence=ISS;IDA] [GO:0001111 "promoter clearance from RNA
polymerase II promoter" evidence=ISS] [GO:0005705 "polytene
chromosome interband" evidence=IDA] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0007088
"regulation of mitosis" evidence=IMP] [GO:0010972 "negative
regulation of G2/M transition of mitotic cell cycle" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0051983 "regulation of chromosome
segregation" evidence=IMP] InterPro:IPR001945 InterPro:IPR002464
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR010643 InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777
Pfam:PF13307 PRINTS:PR00852 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 EMBL:AE013599
GO:GO:0005524 GO:GO:0005737 GO:GO:0007088 GO:GO:0009411
GO:GO:0003677 GO:GO:0006367 GO:GO:0006289 GO:GO:0051983
GO:GO:0005675 GO:GO:0005703 GO:GO:0010972 GO:GO:0005705
TIGRFAMs:TIGR00604 KO:K10844 OMA:KDVDGKC GO:GO:0043141
GeneTree:ENSGT00550000075092 GO:GO:0000439 FlyBase:FBgn0261850
RefSeq:NP_726036.2 UniGene:Dm.718 ProteinModelPortal:Q7KVP9
STRING:Q7KVP9 PRIDE:Q7KVP9 EnsemblMetazoa:FBtr0071576 GeneID:37414
KEGG:dme:Dmel_CG9433 UCSC:CG9433-RA CTD:37414 InParanoid:Q7KVP9
OrthoDB:EOG4FTTFK PhylomeDB:Q7KVP9 GenomeRNAi:37414 NextBio:803510
ArrayExpress:Q7KVP9 Bgee:Q7KVP9 Uniprot:Q7KVP9
Length = 769
Score = 188 (71.2 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 57/234 (24%), Positives = 111/234 (47%)
Query: 453 LSVVTFLESLVNKNEDGRILVT-----KNPELSKSHIKYILLNPANHFTDIVQDARSIIV 507
L+++T +LV+ G ++ K P +S + + L+ + + +++++
Sbjct: 397 LTLITHFATLVSTYTKGFTIIIEPFDDKTPTVSNPILHFSCLDSSIAMAPVFSRFQTVVI 456
Query: 508 AGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFEN 567
GT+ P+ + L V S F+ + + +LP+I+ G FE
Sbjct: 457 TSGTLSPMDMYPKILDFDPVVMSS----FTM--TLARPCLLPMIVSKGNDQVTISSKFET 510
Query: 568 RTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDY-EAIVYNYMRDNHFIERIARIAKKKV 626
R ++ + + VP G+VCFF SY Y E++V ++ D ++ + R K+
Sbjct: 511 REDTAVIRNYGQLLVEVAKTVPDGIVCFFTSYLYLESVVASWY-DQGIVDTLLRY---KL 566
Query: 627 VFREPKKTSEVDKVLSDYGTSVEKG-GALMLSVIGGKLSEGLNFSDDLGRCVVV 679
+F E + +E L +Y + + G GA++L+V GK+SEG++F GR V++
Sbjct: 567 LFIETQDNAETSYALMNYVKACDCGRGAVLLAVARGKVSEGVDFDHHYGRAVLM 620
Score = 43 (20.2 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 280 NPANHFTDIVQDAR 293
N NH T +VQD R
Sbjct: 261 NALNHLTKLVQDIR 274
>ASPGD|ASPL0000055138 [details] [associations]
symbol:AN9436 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0010525 "regulation of
transposition, RNA-mediated" evidence=IEA] [GO:0000019 "regulation
of mitotic recombination" evidence=IEA] [GO:0070816
"phosphorylation of RNA polymerase II C-terminal domain"
evidence=IEA] [GO:0000717 "nucleotide-excision repair, DNA duplex
unwinding" evidence=IEA] [GO:0033683 "nucleotide-excision repair,
DNA incision" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IEA] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=IEA] [GO:0005675 "holo TFIIH complex"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000439 "core
TFIIH complex" evidence=IEA] [GO:0000112 "nucleotide-excision
repair factor 3 complex" evidence=IEA] InterPro:IPR001945
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR010643 InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777
Pfam:PF13307 PRINTS:PR00852 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634
EMBL:BN001308 GO:GO:0003677 GO:GO:0004003 GO:GO:0006289
TIGRFAMs:TIGR00604 OMA:KDVDGKC EnsemblFungi:CADANIAT00001938
Uniprot:C8VRA9
Length = 791
Score = 182 (69.1 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 74/287 (25%), Positives = 122/287 (42%)
Query: 416 SFLKGVQENNPNLSKPSEGGIEEAPSQVQEDQVRN-----PMLSVVTFLESLVNKNEDGR 470
SFL V+E KP E S V+ ++ N P+ V TF +LV+ + G
Sbjct: 355 SFLNHVKELTFIERKPLRFCAERLTSLVRTLELINIEDYQPLQEVATFA-TLVSTYDKGF 413
Query: 471 ILVTKNPELSKSHIKYILLNPANHFTDI--------VQDA-RSIIVAGGTMEPVSEFKDQ 521
+L+ + E + + NP HFT + V D S+++ GT+ P+ E +
Sbjct: 414 LLILEPFESEAATVP----NPVLHFTCLDAAIAIKPVFDRFSSVVITSGTLSPL-EMYPK 468
Query: 522 LFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTI 581
+ G V + S + + + LP+I+ G + +F+ R ++ +
Sbjct: 469 MLGFTTVMQE-----SYSMTLARRSFLPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNIV 523
Query: 582 TNLCTIVPKGMVCFFPSYDYEAIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVL 641
I P G+V FFPSY Y + + + ++ I K++ E E L
Sbjct: 524 LEFSRITPDGVVVFFPSYLYMESIISMWQGMGILDSIWNY---KLILVETPDAQESSLAL 580
Query: 642 SDYGTSVEKG-GALMLSVIGGKLSEGLNFSDDLGRCVVVMCNSNPLR 687
Y T+ G GAL+ V GK+SEG++F GR V +C P +
Sbjct: 581 ETYRTACCNGRGALLFCVARGKVSEGIDFDHHYGRAV--LCIGVPFQ 625
Score = 122 (48.0 bits), Expect = 0.00086, P = 0.00085
Identities = 53/205 (25%), Positives = 89/205 (43%)
Query: 206 SFLKGVQENNPNLSKPPEGGIEEAPSQVQEDQVRN-----PMLSVVTFLESLVNKNEDGR 260
SFL V+E KP E S V+ ++ N P+ V TF +LV+ + G
Sbjct: 355 SFLNHVKELTFIERKPLRFCAERLTSLVRTLELINIEDYQPLQEVATFA-TLVSTYDKGF 413
Query: 261 ILVTKNPELSKSHIKYILLNPANHFTDI--------VQDA-RSIIVAGGTMEPVSEFKDQ 311
+L+ + E + + NP HFT + V D S+++ GT+ P+ E +
Sbjct: 414 LLILEPFESEAATVP----NPVLHFTCLDAAIAIKPVFDRFSSVVITSGTLSPL-EMYPK 468
Query: 312 LFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTI 371
+ G V + S + + + LP+I+ G + +F+ R ++ +
Sbjct: 469 MLGFTTVMQE-----SYSMTLARRSFLPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNIV 523
Query: 372 TNLCTIVPKGMVCFFPSYDY-EAIV 395
I P G+V FFPSY Y E+I+
Sbjct: 524 LEFSRITPDGVVVFFPSYLYMESII 548
>ZFIN|ZDB-GENE-040426-997 [details] [associations]
symbol:ercc2 "excision repair cross-complementing
rodent repair deficiency, complementation group 2" species:7955
"Danio rerio" [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006139 "nucleobase-containing
compound metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001945 InterPro:IPR002464 InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR010643
InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777 Pfam:PF13307
PRINTS:PR00852 PROSITE:PS00690 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 INTERPRO:IPR013020 ZFIN:ZDB-GENE-040426-997
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004003
GO:GO:0006289 TIGRFAMs:TIGR00604 GeneTree:ENSGT00550000075092
EMBL:CR855332 EMBL:JN172105 IPI:IPI00495155 UniGene:Dr.5152
Ensembl:ENSDART00000141618 Uniprot:F1Q5E7
Length = 760
Score = 182 (69.1 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 58/235 (24%), Positives = 109/235 (46%)
Query: 453 LSVVTFLESLVNKNEDGRILVT-----KNPELSKSHIKYILLNPANHFTDIVQDARSIIV 507
+++++ +LV+ G ++ K P ++ + + ++P+ + +++I+
Sbjct: 397 ITLISHFATLVSTYSKGFTIIIEPFEDKTPTIANPVLHFSCMDPSIAIKPVFGRFQTVII 456
Query: 508 AGGTMEPVSEFKDQL-FGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFE 566
GT+ P+ + L F + + F+ + + + PLI+ G FE
Sbjct: 457 TSGTLSPLDIYPRILDFRPVTMAS-----FTM--TLARTCLCPLIVGRGNDQVAMTSKFE 509
Query: 567 NRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDY-EAIVYNYMRDNHFIERIARIAKKK 625
R ++ + + IVP G+V FF SY Y E IV ++ +E I R K
Sbjct: 510 TREDFAVIRNYGNLLLEMSAIVPDGIVAFFTSYMYMENIVASWYEQG-ILENIQR---NK 565
Query: 626 VVFREPKKTSEVDKVLSDYGTSVEKG-GALMLSVIGGKLSEGLNFSDDLGRCVVV 679
++F E + +E L Y + E G GA++LSV GK+SEG++F GR V++
Sbjct: 566 LIFIETQDAAETSMALEKYQEACENGRGAILLSVARGKVSEGIDFVHHFGRAVIM 620
Score = 47 (21.6 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 381 GMVCFFPSYDY-EAIVYNYMPDIEKT 405
G++ +FP YDY Y+YM ++++T
Sbjct: 7 GLLVYFP-YDYIYPEQYSYMLELKRT 31
>DICTYBASE|DDB_G0286621 [details] [associations]
symbol:fncJ "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006139 "nucleobase-containing compound
metabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA;IC] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR002464
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00491 dictyBase:DDB_G0286621 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0003677
EMBL:AAFI02000089 GO:GO:0004003 GO:GO:0006302 InterPro:IPR014001
SMART:SM00487 eggNOG:COG1199 TIGRFAMs:TIGR00604 KO:K15362
RefSeq:XP_637574.1 ProteinModelPortal:Q54LI7
EnsemblProtists:DDB0232367 GeneID:8625714 KEGG:ddi:DDB_G0286621
InParanoid:Q54LI7 Uniprot:Q54LI7
Length = 1078
Score = 180 (68.4 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 60/204 (29%), Positives = 104/204 (50%)
Query: 489 LNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQL---F---GSLG-VPE--SRIHHFSCG 539
++P F+ +VQ RS+++ GT+ P+ F +L F +G +P+ R +
Sbjct: 788 MSPRIAFSSLVQATRSVVLTSGTLSPLYSFPMELAAKFPISAEMGNLPDIAQRAWIGTLS 847
Query: 540 HVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSY 599
H + LI GP+ L F+ D+L E TI ++P G++CFFPSY
Sbjct: 848 HGVKGTK---LICTHGPSE---GLDFQ-----DSLGE---TILQHIELIPSGVLCFFPSY 893
Query: 600 DYEAIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDYGTSVEKG---GALML 656
+ + + + +++I AKK+ F EPK E + L +Y +++ GA++
Sbjct: 894 GFLEKLLSRWDETGILKKIN--AKKRY-FYEPKNQREFIETLDNYREEIKQRPNKGAILF 950
Query: 657 SVIGGKLSEGLNFSDDLGRCVVVM 680
+V GK+SEG++FSD+ R V+V+
Sbjct: 951 AVCRGKVSEGIDFSDEYARGVIVV 974
>CGD|CAL0002854 [details] [associations]
symbol:RAD3 species:5476 "Candida albicans" [GO:0003678 "DNA
helicase activity" evidence=IDA] [GO:0005675 "holo TFIIH complex"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000439 "core
TFIIH complex" evidence=IEA] [GO:0000112 "nucleotide-excision
repair factor 3 complex" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IEA] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=IEA] [GO:0010525 "regulation of
transposition, RNA-mediated" evidence=IEA] [GO:0000019 "regulation
of mitotic recombination" evidence=IEA] [GO:0070816
"phosphorylation of RNA polymerase II C-terminal domain"
evidence=IEA] [GO:0000717 "nucleotide-excision repair, DNA duplex
unwinding" evidence=IEA] [GO:0033683 "nucleotide-excision repair,
DNA incision" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001945
InterPro:IPR002464 InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR010643 InterPro:IPR014013
Pfam:PF06733 Pfam:PF06777 Pfam:PF13307 PRINTS:PR00852
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00488 SMART:SM00491
CGD:CAL0002854 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004003 EMBL:AACQ01000024 GO:GO:0003678
GO:GO:0006289 eggNOG:COG1199 TIGRFAMs:TIGR00604 KO:K10844
RefSeq:XP_720409.1 RefSeq:XP_888639.1 ProteinModelPortal:Q5AFE9
STRING:Q5AFE9 GeneID:3638014 GeneID:3704106 KEGG:cal:CaO19.7119
KEGG:cal:CaO19_7119 Uniprot:Q5AFE9
Length = 765
Score = 187 (70.9 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 65/249 (26%), Positives = 106/249 (42%)
Query: 442 QVQEDQVRNPMLSVVTFLESLVNKNEDGRILVTKNPELSKSHIKYILLNPANHFTDI--- 498
+V E N + + TF +LV+ + G L+ + E S + NP HFT +
Sbjct: 388 EVTEIDDFNALKDIATFA-TLVSTYDSGFQLILEPYETEGSTVP----NPILHFTCLDAS 442
Query: 499 -----VQDA-RSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLIL 552
V D S+I+ GT+ P+ + L + ES + + + LP+I+
Sbjct: 443 IAIKPVFDRFSSVIITSGTISPLDMYPKMLKFETVIQESY------AMTLARRSFLPMIV 496
Query: 553 CSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYEAIVYNYMRDN 612
G FE R ++ + I P GMV FFPSY Y + + +
Sbjct: 497 TKGSDQVSISSRFEIRNDPSVVRNYGSLLIEFAKITPDGMVVFFPSYLYMESIISMWQSM 556
Query: 613 HFIERIARIAKKKVVFREPKKTSEVDKVLSDYGTSVEKG-GALMLSVIGGKLSEGLNFSD 671
++ + K K++ E E L Y + G GA++LSV GK+SEG++F
Sbjct: 557 GVLDEVW---KHKLILVETPDAQETSLALETYRKACSNGRGAVLLSVARGKVSEGIDFDH 613
Query: 672 DLGRCVVVM 680
GR V+++
Sbjct: 614 HYGRTVLMI 622
Score = 38 (18.4 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 396 YNYMPDIEKT 405
Y+YM DI+KT
Sbjct: 22 YSYMCDIKKT 31
>UNIPROTKB|Q5AFE9 [details] [associations]
symbol:RAD3 "Putative uncharacterized protein RAD3"
species:237561 "Candida albicans SC5314" [GO:0003678 "DNA helicase
activity" evidence=IDA] [GO:0032508 "DNA duplex unwinding"
evidence=IDA] InterPro:IPR001945 InterPro:IPR002464
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR010643 InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777
Pfam:PF13307 PRINTS:PR00852 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 CGD:CAL0002854 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004003
EMBL:AACQ01000024 GO:GO:0003678 GO:GO:0006289 eggNOG:COG1199
TIGRFAMs:TIGR00604 KO:K10844 RefSeq:XP_720409.1 RefSeq:XP_888639.1
ProteinModelPortal:Q5AFE9 STRING:Q5AFE9 GeneID:3638014
GeneID:3704106 KEGG:cal:CaO19.7119 KEGG:cal:CaO19_7119
Uniprot:Q5AFE9
Length = 765
Score = 187 (70.9 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 65/249 (26%), Positives = 106/249 (42%)
Query: 442 QVQEDQVRNPMLSVVTFLESLVNKNEDGRILVTKNPELSKSHIKYILLNPANHFTDI--- 498
+V E N + + TF +LV+ + G L+ + E S + NP HFT +
Sbjct: 388 EVTEIDDFNALKDIATFA-TLVSTYDSGFQLILEPYETEGSTVP----NPILHFTCLDAS 442
Query: 499 -----VQDA-RSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLIL 552
V D S+I+ GT+ P+ + L + ES + + + LP+I+
Sbjct: 443 IAIKPVFDRFSSVIITSGTISPLDMYPKMLKFETVIQESY------AMTLARRSFLPMIV 496
Query: 553 CSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYEAIVYNYMRDN 612
G FE R ++ + I P GMV FFPSY Y + + +
Sbjct: 497 TKGSDQVSISSRFEIRNDPSVVRNYGSLLIEFAKITPDGMVVFFPSYLYMESIISMWQSM 556
Query: 613 HFIERIARIAKKKVVFREPKKTSEVDKVLSDYGTSVEKG-GALMLSVIGGKLSEGLNFSD 671
++ + K K++ E E L Y + G GA++LSV GK+SEG++F
Sbjct: 557 GVLDEVW---KHKLILVETPDAQETSLALETYRKACSNGRGAVLLSVARGKVSEGIDFDH 613
Query: 672 DLGRCVVVM 680
GR V+++
Sbjct: 614 HYGRTVLMI 622
Score = 38 (18.4 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 396 YNYMPDIEKT 405
Y+YM DI+KT
Sbjct: 22 YSYMCDIKKT 31
>TAIR|locus:2014525 [details] [associations]
symbol:UVH6 "ULTRAVIOLET HYPERSENSITIVE 6" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=IEA] [GO:0006289 "nucleotide-excision repair"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IMP] [GO:0009408
"response to heat" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000394 "RNA splicing, via endonucleolytic
cleavage and ligation" evidence=RCA] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=RCA] [GO:0006457 "protein folding" evidence=RCA]
[GO:0009644 "response to high light intensity" evidence=RCA]
[GO:0010212 "response to ionizing radiation" evidence=RCA]
[GO:0010286 "heat acclimation" evidence=RCA] [GO:0042542 "response
to hydrogen peroxide" evidence=RCA] [GO:0043687 "post-translational
protein modification" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0009411 "response to UV" evidence=IMP] InterPro:IPR001945
InterPro:IPR002464 InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR010643 InterPro:IPR014013
Pfam:PF06733 Pfam:PF06777 Pfam:PF13307 PRINTS:PR00852
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00488 SMART:SM00491
INTERPRO:IPR013020 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005524 GO:GO:0005634 GO:GO:0009411 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0006281 GO:GO:0006351
GO:GO:0051539 GO:GO:0009408 GO:GO:0004003 GO:GO:0006289
eggNOG:COG1199 TIGRFAMs:TIGR00604 EMBL:AY090788 EMBL:AF188623
EMBL:AC005278 EMBL:AY062471 EMBL:AY090915 EMBL:BT010344
IPI:IPI00543586 PIR:C86163 RefSeq:NP_171818.1 RefSeq:NP_849584.1
UniGene:At.10863 ProteinModelPortal:Q8W4M7 SMR:Q8W4M7 IntAct:Q8W4M7
STRING:Q8W4M7 PaxDb:Q8W4M7 PRIDE:Q8W4M7 EnsemblPlants:AT1G03190.1
EnsemblPlants:AT1G03190.2 GeneID:839557 KEGG:ath:AT1G03190
GeneFarm:4445 TAIR:At1g03190 HOGENOM:HOG000205390 InParanoid:Q8W4M7
KO:K10844 OMA:KDVDGKC PhylomeDB:Q8W4M7 ProtClustDB:CLSN2679645
Genevestigator:Q8W4M7 GermOnline:AT1G03190 Uniprot:Q8W4M7
Length = 758
Score = 176 (67.0 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 50/179 (27%), Positives = 87/179 (48%)
Query: 503 RSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIPKENILPLILCSGPTNRKFD 562
+S+++ GT+ P+ + +L V SR S + ++ I P++L G
Sbjct: 452 QSVVITSGTLSPIDLYP-RLLNFTPVV-SRSFKMS----MTRDCICPMVLTRGSDQLPVS 505
Query: 563 LTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDY-EAIVYNYMRDNHFIERIARI 621
F+ R+ ++ + + +IVP G+VCFF SY Y + I+ + E I
Sbjct: 506 TKFDMRSDPGVVRNYGKLLVEMVSIVPDGVVCFFVSYSYMDGIIATWNETGILKE----I 561
Query: 622 AKKKVVFREPKKTSEVDKVLSDYGTSVEKG-GALMLSVIGGKLSEGLNFSDDLGRCVVV 679
++K+VF E + E L +Y + + G GA+ SV GK++EG++F GR VV+
Sbjct: 562 MQQKLVFIETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVVM 620
Score = 47 (21.6 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 24/87 (27%), Positives = 36/87 (41%)
Query: 122 KLLHEVQGL-LETSCR------SCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYVASA 174
KLLH+ Q L T + S R+++ V ENR++ K T++ V S
Sbjct: 88 KLLHDYQVRHLGTQAKILALGLSSRKNLCVNTKVLAAENRDSVDAACRKRTASWVRALST 147
Query: 175 QKNLVEPRMQLCHELWGGEKTQEKPKL 201
+ P ++LC EK E L
Sbjct: 148 EN----PNVELCDFFENYEKAAENALL 170
>GENEDB_PFALCIPARUM|PF14_0428 [details] [associations]
symbol:PF14_0428 "histidine --tRNA ligase,
putative" species:5833 "Plasmodium falciparum" [GO:0004821
"histidine-tRNA ligase activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR004516
InterPro:IPR006195 PROSITE:PS50862 InterPro:IPR004154 GO:GO:0005524
GO:GO:0005737 EMBL:AE014187 GO:GO:0006418 SUPFAM:SSF52954
Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476 KO:K01892
GO:GO:0004821 RefSeq:XP_001348602.1 ProteinModelPortal:Q8IL22
PRIDE:Q8IL22 EnsemblProtists:PF14_0428:mRNA GeneID:812010
KEGG:pfa:PF14_0428 EuPathDB:PlasmoDB:PF3D7_1445100
HOGENOM:HOG000282110 ProtClustDB:CLSZ2432159 Uniprot:Q8IL22
Length = 1132
Score = 169 (64.5 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 48/132 (36%), Positives = 70/132 (53%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVD--LVENLLADEFLAKSKQAKEGLEAIKLLFHYCQ 58
++ +K + E DKI +Y+ K + LV L ++ + + LE + H Q
Sbjct: 795 LLNDKGIHIEAIDKIEQYISKTLSLSPFLVIEFLRNDLKESTLNEEYKLEIQNCINHLEQ 854
Query: 59 IYGLK------DTIVFDLSLARGLDYYTGVIYEAVLKDQA-VGSVAGGGRYDNLVGMFDP 111
I+ L + FDLSLARGLDYYTG+I+E VL + VGSVA GGRYD L+ +
Sbjct: 855 IFDLLKHFNMLNQFSFDLSLARGLDYYTGIIFEFVLLSETNVGSVAAGGRYDFLIR--NK 912
Query: 112 KNKTTPCVAAKL 123
+ + P V A +
Sbjct: 913 RREYLPSVGASI 924
Score = 56 (24.8 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 153 NRNAEQGVKV--KTTSTQVYVASAQKNLVEPRMQLCHELWGGEKTQE 197
N N+E K+ K + V V + +K+ + ++LC +LW + + E
Sbjct: 1000 NNNSENSNKLNMKDNAVDVLVCNIKKDCFKEIVELCTKLWENDISTE 1046
Score = 41 (19.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 21/80 (26%), Positives = 31/80 (38%)
Query: 142 IGVERLFSIIEN--RNAEQGVKVKTTSTQVYVASAQKNLVEPRMQLCHELWGGEKTQEKP 199
IG+ER+ +I E R K K +T + +N V ++ E Q K
Sbjct: 924 IGIERIITIAEEFIRTKNLFCKTKDETTNKDNKNNHQNHVNVQID--------ENVQNKK 975
Query: 200 KLSGLQSFLKGVQENNPNLS 219
K + +K NN N S
Sbjct: 976 KTNISNKEIKPKSSNNKNNS 995
>UNIPROTKB|Q8IL22 [details] [associations]
symbol:PF14_0428 "Histidine--tRNA ligase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004821
"histidine-tRNA ligase activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR004516
InterPro:IPR006195 PROSITE:PS50862 InterPro:IPR004154 GO:GO:0005524
GO:GO:0005737 EMBL:AE014187 GO:GO:0006418 SUPFAM:SSF52954
Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476 KO:K01892
GO:GO:0004821 RefSeq:XP_001348602.1 ProteinModelPortal:Q8IL22
PRIDE:Q8IL22 EnsemblProtists:PF14_0428:mRNA GeneID:812010
KEGG:pfa:PF14_0428 EuPathDB:PlasmoDB:PF3D7_1445100
HOGENOM:HOG000282110 ProtClustDB:CLSZ2432159 Uniprot:Q8IL22
Length = 1132
Score = 169 (64.5 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 48/132 (36%), Positives = 70/132 (53%)
Query: 1 MVGEKNLSPEVADKIGEYVLKHGHVD--LVENLLADEFLAKSKQAKEGLEAIKLLFHYCQ 58
++ +K + E DKI +Y+ K + LV L ++ + + LE + H Q
Sbjct: 795 LLNDKGIHIEAIDKIEQYISKTLSLSPFLVIEFLRNDLKESTLNEEYKLEIQNCINHLEQ 854
Query: 59 IYGLK------DTIVFDLSLARGLDYYTGVIYEAVLKDQA-VGSVAGGGRYDNLVGMFDP 111
I+ L + FDLSLARGLDYYTG+I+E VL + VGSVA GGRYD L+ +
Sbjct: 855 IFDLLKHFNMLNQFSFDLSLARGLDYYTGIIFEFVLLSETNVGSVAAGGRYDFLIR--NK 912
Query: 112 KNKTTPCVAAKL 123
+ + P V A +
Sbjct: 913 RREYLPSVGASI 924
Score = 56 (24.8 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 153 NRNAEQGVKV--KTTSTQVYVASAQKNLVEPRMQLCHELWGGEKTQE 197
N N+E K+ K + V V + +K+ + ++LC +LW + + E
Sbjct: 1000 NNNSENSNKLNMKDNAVDVLVCNIKKDCFKEIVELCTKLWENDISTE 1046
Score = 41 (19.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 21/80 (26%), Positives = 31/80 (38%)
Query: 142 IGVERLFSIIEN--RNAEQGVKVKTTSTQVYVASAQKNLVEPRMQLCHELWGGEKTQEKP 199
IG+ER+ +I E R K K +T + +N V ++ E Q K
Sbjct: 924 IGIERIITIAEEFIRTKNLFCKTKDETTNKDNKNNHQNHVNVQID--------ENVQNKK 975
Query: 200 KLSGLQSFLKGVQENNPNLS 219
K + +K NN N S
Sbjct: 976 KTNISNKEIKPKSSNNKNNS 995
>UNIPROTKB|E7EVE9 [details] [associations]
symbol:ERCC2 "TFIIH basal transcription factor complex
helicase XPD subunit" species:9606 "Homo sapiens" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002464
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR010643 InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777
Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004003 TIGRFAMs:TIGR00604 EMBL:L47234
HGNC:HGNC:3434 ChiTaRS:ERCC2 IPI:IPI00745781
ProteinModelPortal:E7EVE9 Ensembl:ENST00000391944 UCSC:uc010ejz.2
ArrayExpress:E7EVE9 Bgee:E7EVE9 Uniprot:E7EVE9
Length = 682
Score = 169 (64.5 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 51/208 (24%), Positives = 97/208 (46%)
Query: 475 KNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQL-FGSLGVPESRI 533
+ P ++ + + ++ + + + +S+I+ GT+ P+ + L F + +
Sbjct: 346 RTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT--- 402
Query: 534 HHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMV 593
F+ + + + P+I+ G FE R ++ + + +VP G+V
Sbjct: 403 --FTM--TLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIV 458
Query: 594 CFFPSYDY-EAIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDYGTSVEKG- 651
FF SY Y E+ V ++ +E I R K++F E + +E L Y + E G
Sbjct: 459 AFFTSYQYMESTVASWYEQG-ILENIQR---NKLLFIETQDGAETSVALEKYQEACENGR 514
Query: 652 GALMLSVIGGKLSEGLNFSDDLGRCVVV 679
GA++LSV GK+SEG++F GR V++
Sbjct: 515 GAILLSVARGKVSEGIDFVHHYGRAVIM 542
>UNIPROTKB|A8MX75 [details] [associations]
symbol:ERCC2 "TFIIH basal transcription factor complex
helicase XPD subunit" species:9606 "Homo sapiens" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0006289 "nucleotide-excision repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001945 InterPro:IPR002464
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR010643 InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777
Pfam:PF13307 PRINTS:PR00852 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004003 GO:GO:0006289
TIGRFAMs:TIGR00604 HOGENOM:HOG000205390 HOVERGEN:HBG051498
EMBL:L47234 HGNC:HGNC:3434 ChiTaRS:ERCC2 IPI:IPI00442420
ProteinModelPortal:A8MX75 STRING:A8MX75 PRIDE:A8MX75
Ensembl:ENST00000391941 ArrayExpress:A8MX75 Bgee:A8MX75
Uniprot:A8MX75
Length = 706
Score = 169 (64.5 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 51/208 (24%), Positives = 97/208 (46%)
Query: 475 KNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQL-FGSLGVPESRI 533
+ P ++ + + ++ + + + +S+I+ GT+ P+ + L F + +
Sbjct: 400 RTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT--- 456
Query: 534 HHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMV 593
F+ + + + P+I+ G FE R ++ + + +VP G+V
Sbjct: 457 --FTM--TLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIV 512
Query: 594 CFFPSYDY-EAIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDYGTSVEKG- 651
FF SY Y E+ V ++ +E I R K++F E + +E L Y + E G
Sbjct: 513 AFFTSYQYMESTVASWYEQG-ILENIQR---NKLLFIETQDGAETSVALEKYQEACENGR 568
Query: 652 GALMLSVIGGKLSEGLNFSDDLGRCVVV 679
GA++LSV GK+SEG++F GR V++
Sbjct: 569 GAILLSVARGKVSEGIDFVHHYGRAVIM 596
>UNIPROTKB|J9NWT1 [details] [associations]
symbol:ERCC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001945 InterPro:IPR002464 InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR010643
InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777 Pfam:PF13307
PRINTS:PR00852 PROSITE:PS00690 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004003 GO:GO:0006289 TIGRFAMs:TIGR00604
GeneTree:ENSGT00550000075092 EMBL:AAEX03000876
Ensembl:ENSCAFT00000044333 Uniprot:J9NWT1
Length = 707
Score = 169 (64.5 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 51/208 (24%), Positives = 97/208 (46%)
Query: 475 KNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQL-FGSLGVPESRI 533
+ P ++ + + ++ + + + +S+I+ GT+ P+ + L F + +
Sbjct: 424 RTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT--- 480
Query: 534 HHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMV 593
F+ + + + P+I+ G FE R ++ + + +VP G+V
Sbjct: 481 --FTM--TLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIV 536
Query: 594 CFFPSYDY-EAIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDYGTSVEKG- 651
FF SY Y E+ V ++ +E I R K++F E + +E L Y + E G
Sbjct: 537 AFFTSYQYMESTVASWYEQG-ILENIQR---NKLLFIETQDGAETSVALEKYQEACENGR 592
Query: 652 GALMLSVIGGKLSEGLNFSDDLGRCVVV 679
GA++LSV GK+SEG++F GR V++
Sbjct: 593 GAILLSVARGKVSEGIDFVHHYGRAVIM 620
>UNIPROTKB|F1N2P3 [details] [associations]
symbol:ERCC2 "TFIIH basal transcription factor complex
helicase XPD subunit" species:9913 "Bos taurus" [GO:0071817 "MMXD
complex" evidence=IEA] [GO:0060218 "hematopoietic stem cell
differentiation" evidence=IEA] [GO:0048820 "hair follicle
maturation" evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043588 "skin
development" evidence=IEA] [GO:0043388 "positive regulation of DNA
binding" evidence=IEA] [GO:0043249 "erythrocyte maturation"
evidence=IEA] [GO:0043139 "5'-3' DNA helicase activity"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0040016 "embryonic cleavage"
evidence=IEA] [GO:0035315 "hair cell differentiation" evidence=IEA]
[GO:0035264 "multicellular organism growth" evidence=IEA]
[GO:0033683 "nucleotide-excision repair, DNA incision"
evidence=IEA] [GO:0032289 "central nervous system myelin formation"
evidence=IEA] [GO:0030282 "bone mineralization" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0021510 "spinal cord development" evidence=IEA] [GO:0019907
"cyclin-dependent protein kinase activating kinase holoenzyme
complex" evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0009650 "UV protection" evidence=IEA] [GO:0008353
"RNA polymerase II carboxy-terminal domain kinase activity"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0007568
"aging" evidence=IEA] [GO:0007059 "chromosome segregation"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0000075 "cell cycle
checkpoint" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001945
InterPro:IPR002464 InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR010643 InterPro:IPR014013
Pfam:PF06733 Pfam:PF06777 Pfam:PF13307 PRINTS:PR00852
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00488 SMART:SM00491
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005737 GO:GO:0006915
GO:GO:0043066 GO:GO:0043588 GO:GO:0007059 GO:GO:0006979
GO:GO:0006917 GO:GO:0003677 GO:GO:0008283 GO:GO:0007568
GO:GO:0001701 GO:GO:0045944 GO:GO:0030198 GO:GO:0040016
GO:GO:0009791 GO:GO:0060218 GO:GO:0004003 GO:GO:0035264
GO:GO:0071817 GO:GO:0021510 GO:GO:0030282 GO:GO:0000075
GO:GO:0043388 GO:GO:0008353 GO:GO:0009650 GO:GO:0019907
GO:GO:0006283 TIGRFAMs:TIGR00604 GO:GO:0035315 GO:GO:0043139
GO:GO:0043249 OMA:KDVDGKC IPI:IPI00866827 GO:GO:0033683
GO:GO:0032289 GO:GO:0048820 GeneTree:ENSGT00550000075092
EMBL:DAAA02047375 Ensembl:ENSBTAT00000002680 Uniprot:F1N2P3
Length = 759
Score = 169 (64.5 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 51/208 (24%), Positives = 97/208 (46%)
Query: 475 KNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQL-FGSLGVPESRI 533
+ P ++ + + ++ + + + +S+I+ GT+ P+ + L F + +
Sbjct: 423 RTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT--- 479
Query: 534 HHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMV 593
F+ + + + P+I+ G FE R ++ + + +VP G+V
Sbjct: 480 --FTM--TLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIV 535
Query: 594 CFFPSYDY-EAIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDYGTSVEKG- 651
FF SY Y E+ V ++ +E I R K++F E + +E L Y + E G
Sbjct: 536 AFFTSYQYMESTVASWYEQG-ILENIQR---NKLLFIETQDGAETSVALEKYQEACENGR 591
Query: 652 GALMLSVIGGKLSEGLNFSDDLGRCVVV 679
GA++LSV GK+SEG++F GR V++
Sbjct: 592 GAILLSVARGKVSEGIDFVHHYGRAVIM 619
>UNIPROTKB|A6QLJ0 [details] [associations]
symbol:ERCC2 "TFIIH basal transcription factor complex
helicase XPD subunit" species:9913 "Bos taurus" [GO:0006468
"protein phosphorylation" evidence=ISS] [GO:0008353 "RNA polymerase
II carboxy-terminal domain kinase activity" evidence=ISS]
[GO:0071817 "MMXD complex" evidence=ISS] [GO:0005819 "spindle"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0007059 "chromosome segregation"
evidence=ISS] [GO:0005675 "holo TFIIH complex" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0035315 "hair cell differentiation" evidence=ISS] [GO:0004672
"protein kinase activity" evidence=ISS] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0043139 "5'-3' DNA helicase activity"
evidence=ISS] [GO:0033683 "nucleotide-excision repair, DNA
incision" evidence=ISS] [GO:0019907 "cyclin-dependent protein
kinase activating kinase holoenzyme complex" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0006979 "response to oxidative stress"
evidence=ISS] [GO:0000075 "cell cycle checkpoint" evidence=ISS]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IEA]
InterPro:IPR001945 InterPro:IPR002464 InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR010643
InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777 Pfam:PF13307
PRINTS:PR00852 PROSITE:PS00690 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005737
GO:GO:0007059 GO:GO:0006979 GO:GO:0046872 GO:GO:0003677
GO:GO:0045944 GO:GO:0006468 GO:GO:0051539 GO:GO:0006366
GO:GO:0004003 GO:GO:0071817 GO:GO:0008022 GO:GO:0000075
GO:GO:0005675 eggNOG:COG1199 TIGRFAMs:TIGR00604 GO:GO:0035315
GO:GO:0043139 KO:K10844 EMBL:BC147982 IPI:IPI00866827
RefSeq:NP_001096787.1 UniGene:Bt.4215 STRING:A6QLJ0 PRIDE:A6QLJ0
GeneID:100125238 KEGG:bta:100125238 CTD:2068 HOVERGEN:HBG051498
NextBio:20788783 GO:GO:0033683 Uniprot:A6QLJ0
Length = 760
Score = 169 (64.5 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 51/208 (24%), Positives = 97/208 (46%)
Query: 475 KNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQL-FGSLGVPESRI 533
+ P ++ + + ++ + + + +S+I+ GT+ P+ + L F + +
Sbjct: 424 RTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT--- 480
Query: 534 HHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMV 593
F+ + + + P+I+ G FE R ++ + + +VP G+V
Sbjct: 481 --FTM--TLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIV 536
Query: 594 CFFPSYDY-EAIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDYGTSVEKG- 651
FF SY Y E+ V ++ +E I R K++F E + +E L Y + E G
Sbjct: 537 AFFTSYQYMESTVASWYEQG-ILENIQR---NKLLFIETQDGAETSVALEKYQEACENGR 592
Query: 652 GALMLSVIGGKLSEGLNFSDDLGRCVVV 679
GA++LSV GK+SEG++F GR V++
Sbjct: 593 GAILLSVARGKVSEGIDFVHHYGRAVIM 620
>UNIPROTKB|P18074 [details] [associations]
symbol:ERCC2 "TFIIH basal transcription factor complex
helicase XPD subunit" species:9606 "Homo sapiens" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur
cluster binding" evidence=IEA] [GO:0021510 "spinal cord
development" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0030282 "bone mineralization"
evidence=IEA] [GO:0032289 "central nervous system myelin formation"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0040016 "embryonic cleavage" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043249 "erythrocyte maturation" evidence=IEA]
[GO:0043388 "positive regulation of DNA binding" evidence=IEA]
[GO:0043588 "skin development" evidence=IEA] [GO:0048820 "hair
follicle maturation" evidence=IEA] [GO:0060218 "hematopoietic stem
cell differentiation" evidence=IEA] [GO:0000441 "SSL2-core TFIIH
complex" evidence=IEA] [GO:0001666 "response to hypoxia"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0007568 "aging" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA;TAS] [GO:0006289 "nucleotide-excision repair"
evidence=IGI;NAS;TAS] [GO:0047485 "protein N-terminus binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006917 "induction of apoptosis" evidence=IMP] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IDA;TAS]
[GO:0005675 "holo TFIIH complex" evidence=IDA;TAS] [GO:0033683
"nucleotide-excision repair, DNA incision" evidence=IMP]
[GO:0004672 "protein kinase activity" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0043139 "5'-3' DNA helicase activity"
evidence=IDA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IDA;TAS] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0019907 "cyclin-dependent
protein kinase activating kinase holoenzyme complex" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0035315 "hair cell differentiation" evidence=IMP]
[GO:0000075 "cell cycle checkpoint" evidence=IMP] [GO:0006979
"response to oxidative stress" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0007059
"chromosome segregation" evidence=IMP] [GO:0071817 "MMXD complex"
evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0008353 "RNA
polymerase II carboxy-terminal domain kinase activity"
evidence=IDA] [GO:0009650 "UV protection" evidence=IGI] [GO:0000718
"nucleotide-excision repair, DNA damage removal" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006281 "DNA repair"
evidence=TAS] [GO:0006360 "transcription from RNA polymerase I
promoter" evidence=TAS] [GO:0006361 "transcription initiation from
RNA polymerase I promoter" evidence=TAS] [GO:0006362 "transcription
elongation from RNA polymerase I promoter" evidence=TAS]
[GO:0006363 "termination of RNA polymerase I transcription"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=TAS]
[GO:0006370 "7-methylguanosine mRNA capping" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0050434 "positive regulation of
viral transcription" evidence=TAS] [GO:0006468 "protein
phosphorylation" evidence=IDA] Reactome:REACT_216 Reactome:REACT_71
InterPro:IPR001945 InterPro:IPR002464 InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR010643
InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777 Pfam:PF13307
PRINTS:PR00852 PROSITE:PS00690 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005737
Reactome:REACT_116125 GO:GO:0006915 GO:GO:0019048 GO:GO:0043066
GO:GO:0043588 GO:GO:0007059 GO:GO:0016032 GO:GO:0006979
GO:GO:0006917 GO:GO:0046872 GO:GO:0003677 GO:GO:0008283
GO:GO:0007568 GO:GO:0001701 GO:GO:0001666 Reactome:REACT_1675
GO:GO:0045944 GO:GO:0030198 GO:GO:0006468 EMBL:CH471126
GO:GO:0040016 GO:GO:0051539 GO:GO:0009791 GO:GO:0060218
GO:GO:0004003 GO:GO:0035264 GO:GO:0006368 GO:GO:0071817
GO:GO:0021510 GO:GO:0030282 GO:GO:0006367 GO:GO:0000075
Reactome:REACT_1788 GO:GO:0043388 GO:GO:0009650 GO:GO:0005675
GO:GO:0006370 GO:GO:0000718 GO:GO:0050434 GO:GO:0006363
GO:GO:0006362 GO:GO:0006361 GO:GO:0006283 GO:GO:0008094
eggNOG:COG1199 TIGRFAMs:TIGR00604 GO:GO:0035315 GO:GO:0043139
GO:GO:0043249 Orphanet:1466 HOGENOM:HOG000205390 KO:K10844
OMA:KDVDGKC CTD:2068 HOVERGEN:HBG051498 GO:GO:0033683 EMBL:X52221
EMBL:X52222 EMBL:L47234 EMBL:AY092780 EMBL:BT006883 EMBL:BC108255
EMBL:BC110523 IPI:IPI00029728 IPI:IPI00984321 PIR:S10888
RefSeq:NP_000391.1 RefSeq:NP_001124339.1 UniGene:Hs.487294
ProteinModelPortal:P18074 DIP:DIP-644N STRING:P18074
PhosphoSite:P18074 DMDM:119540 PaxDb:P18074 PRIDE:P18074 DNASU:2068
Ensembl:ENST00000391940 Ensembl:ENST00000391942
Ensembl:ENST00000391945 GeneID:2068 KEGG:hsa:2068 UCSC:uc002pbj.2
GeneCards:GC19M045854 HGNC:HGNC:3434 HPA:CAB005375 MIM:126340
MIM:278730 MIM:601675 MIM:610756 neXtProt:NX_P18074 Orphanet:231256
Orphanet:453 Orphanet:670 Orphanet:276258 Orphanet:220295
PharmGKB:PA27848 InParanoid:P18074 OrthoDB:EOG4BVRT2
PhylomeDB:P18074 ChiTaRS:ERCC2 GenomeRNAi:2068 NextBio:8409
ArrayExpress:P18074 Bgee:P18074 CleanEx:HS_ERCC2
Genevestigator:P18074 GermOnline:ENSG00000104884 GO:GO:0000441
GO:GO:0032289 GO:GO:0048820 Uniprot:P18074
Length = 760
Score = 169 (64.5 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 51/208 (24%), Positives = 97/208 (46%)
Query: 475 KNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQL-FGSLGVPESRI 533
+ P ++ + + ++ + + + +S+I+ GT+ P+ + L F + +
Sbjct: 424 RTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT--- 480
Query: 534 HHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMV 593
F+ + + + P+I+ G FE R ++ + + +VP G+V
Sbjct: 481 --FTM--TLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIV 536
Query: 594 CFFPSYDY-EAIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDYGTSVEKG- 651
FF SY Y E+ V ++ +E I R K++F E + +E L Y + E G
Sbjct: 537 AFFTSYQYMESTVASWYEQG-ILENIQR---NKLLFIETQDGAETSVALEKYQEACENGR 592
Query: 652 GALMLSVIGGKLSEGLNFSDDLGRCVVV 679
GA++LSV GK+SEG++F GR V++
Sbjct: 593 GAILLSVARGKVSEGIDFVHHYGRAVIM 620
>UNIPROTKB|Q60452 [details] [associations]
symbol:ERCC2 "TFIIH basal transcription factor complex
helicase XPD subunit" species:10029 "Cricetulus griseus"
[GO:0000075 "cell cycle checkpoint" evidence=ISS] [GO:0005675 "holo
TFIIH complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005819 "spindle" evidence=ISS] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0006468 "protein phosphorylation" evidence=ISS]
[GO:0006917 "induction of apoptosis" evidence=ISS] [GO:0006979
"response to oxidative stress" evidence=ISS] [GO:0007059
"chromosome segregation" evidence=ISS] [GO:0008022 "protein
C-terminus binding" evidence=ISS] [GO:0033683 "nucleotide-excision
repair, DNA incision" evidence=ISS] [GO:0035315 "hair cell
differentiation" evidence=ISS] [GO:0043139 "5'-3' DNA helicase
activity" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0047485 "protein N-terminus binding"
evidence=ISS] [GO:0071817 "MMXD complex" evidence=ISS] [GO:0019907
"cyclin-dependent protein kinase activating kinase holoenzyme
complex" evidence=ISS] [GO:0004672 "protein kinase activity"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0008353 "RNA polymerase II carboxy-terminal
domain kinase activity" evidence=ISS] InterPro:IPR001945
InterPro:IPR002464 InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR010643 InterPro:IPR014013
Pfam:PF06733 Pfam:PF06777 Pfam:PF13307 PRINTS:PR00852
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00488 SMART:SM00491
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005737 GO:GO:0007059
GO:GO:0006979 GO:GO:0006917 GO:GO:0046872 GO:GO:0003677
GO:GO:0045944 GO:GO:0006468 GO:GO:0051539 GO:GO:0006366
GO:GO:0004003 GO:GO:0071817 GO:GO:0008022 GO:GO:0047485
GO:GO:0000075 GO:GO:0005675 GO:GO:0006283 TIGRFAMs:TIGR00604
GO:GO:0035315 GO:GO:0043139 CTD:2068 HOVERGEN:HBG051498
GO:GO:0033683 EMBL:U04968 EMBL:U04967 PIR:A55732
RefSeq:NP_001231320.1 GeneID:100689272 Uniprot:Q60452
Length = 760
Score = 169 (64.5 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 51/208 (24%), Positives = 97/208 (46%)
Query: 475 KNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQL-FGSLGVPESRI 533
+ P ++ + + ++ + + + +S+I+ GT+ P+ + L F + +
Sbjct: 424 RTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT--- 480
Query: 534 HHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMV 593
F+ + + + P+I+ G FE R ++ + + +VP G+V
Sbjct: 481 --FTM--TLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIV 536
Query: 594 CFFPSYDY-EAIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDYGTSVEKG- 651
FF SY Y E+ V ++ +E I R K++F E + +E L Y + E G
Sbjct: 537 AFFTSYQYMESTVASWYEQG-ILENIQR---NKLLFIETQDGAETSVALEKYQEACENGR 592
Query: 652 GALMLSVIGGKLSEGLNFSDDLGRCVVV 679
GA++LSV GK+SEG++F GR V++
Sbjct: 593 GAILLSVARGKVSEGIDFVHHYGRAVIM 620
>MGI|MGI:95413 [details] [associations]
symbol:Ercc2 "excision repair cross-complementing rodent
repair deficiency, complementation group 2" species:10090 "Mus
musculus" [GO:0000075 "cell cycle checkpoint" evidence=ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IMP] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005675 "holo TFIIH complex" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005819 "spindle" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IMP] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=ISO]
[GO:0006289 "nucleotide-excision repair" evidence=ISO;IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0006468 "protein phosphorylation"
evidence=ISO] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0006917 "induction of apoptosis" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=ISO;IMP] [GO:0007059
"chromosome segregation" evidence=ISO] [GO:0007568 "aging"
evidence=IMP] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0009411 "response to UV" evidence=IMP] [GO:0009650 "UV
protection" evidence=ISO;IMP] [GO:0009791 "post-embryonic
development" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0021510 "spinal cord development" evidence=IMP]
[GO:0022405 "hair cycle process" evidence=IMP] [GO:0030198
"extracellular matrix organization" evidence=IMP] [GO:0030282 "bone
mineralization" evidence=IMP] [GO:0032289 "central nervous system
myelin formation" evidence=IMP] [GO:0033683 "nucleotide-excision
repair, DNA incision" evidence=ISO] [GO:0035264 "multicellular
organism growth" evidence=IMP] [GO:0035315 "hair cell
differentiation" evidence=ISO;IMP] [GO:0040016 "embryonic cleavage"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043139 "5'-3' DNA helicase activity"
evidence=ISO] [GO:0043249 "erythrocyte maturation" evidence=IMP]
[GO:0043388 "positive regulation of DNA binding" evidence=IMP]
[GO:0043588 "skin development" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=ISO] [GO:0048820 "hair follicle maturation" evidence=IMP]
[GO:0051536 "iron-sulfur cluster binding" evidence=IEA] [GO:0051539
"4 iron, 4 sulfur cluster binding" evidence=IEA] [GO:0060218
"hematopoietic stem cell differentiation" evidence=IMP] [GO:0071817
"MMXD complex" evidence=ISO] InterPro:IPR001945 InterPro:IPR002464
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR010643 InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777
Pfam:PF13307 PRINTS:PR00852 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 MGI:MGI:95413 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005737 GO:GO:0006915 GO:GO:0043066
GO:GO:0043588 GO:GO:0007059 GO:GO:0006979 GO:GO:0006917
GO:GO:0046872 GO:GO:0003677 GO:GO:0008283 GO:GO:0007568
GO:GO:0001701 GO:GO:0001666 GO:GO:0045944 GO:GO:0030198
GO:GO:0040016 GO:GO:0051539 GO:GO:0006366 GO:GO:0009791
GO:GO:0060218 GO:GO:0004003 GO:GO:0035264 GO:GO:0071817
GO:GO:0021510 GO:GO:0030282 GO:GO:0000075 GO:GO:0043388
GO:GO:0008353 GO:GO:0009650 GO:GO:0005675 GO:GO:0019907
GO:GO:0006283 eggNOG:COG1199 TIGRFAMs:TIGR00604 GO:GO:0035315
GO:GO:0043139 GO:GO:0043249 EMBL:CH466639 HOGENOM:HOG000205390
KO:K10844 OMA:KDVDGKC CTD:2068 HOVERGEN:HBG051498 GO:GO:0033683
OrthoDB:EOG4BVRT2 GO:GO:0000441 GO:GO:0032289 GO:GO:0048820
EMBL:U97572 EMBL:AK004652 EMBL:AK082761 IPI:IPI00310721
RefSeq:NP_031975.2 UniGene:Mm.36524 ProteinModelPortal:O08811
SMR:O08811 STRING:O08811 PhosphoSite:O08811 PaxDb:O08811
PRIDE:O08811 Ensembl:ENSMUST00000062831 GeneID:13871 KEGG:mmu:13871
GeneTree:ENSGT00550000075092 InParanoid:Q8C487 NextBio:284788
Bgee:O08811 Genevestigator:O08811 GermOnline:ENSMUSG00000030400
Uniprot:O08811
Length = 760
Score = 169 (64.5 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 51/208 (24%), Positives = 97/208 (46%)
Query: 475 KNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQL-FGSLGVPESRI 533
+ P ++ + + ++ + + + +S+I+ GT+ P+ + L F + +
Sbjct: 424 RTPTIANPVLHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT--- 480
Query: 534 HHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMV 593
F+ + + + P+I+ G FE R ++ + + +VP G+V
Sbjct: 481 --FTM--TLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIV 536
Query: 594 CFFPSYDY-EAIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDYGTSVEKG- 651
FF SY Y E+ V ++ +E I R K++F E + +E L Y + E G
Sbjct: 537 AFFTSYQYMESTVASWYEQG-ILENIQR---NKLLFIETQDGAETSVALEKYQEACENGR 592
Query: 652 GALMLSVIGGKLSEGLNFSDDLGRCVVV 679
GA++LSV GK+SEG++F GR V++
Sbjct: 593 GAILLSVARGKVSEGIDFVHHYGRAVIM 620
>RGD|1309109 [details] [associations]
symbol:Ercc2 "excision repair cross-complementing rodent repair
deficiency, complementation group 2" species:10116 "Rattus
norvegicus" [GO:0000075 "cell cycle checkpoint" evidence=IEA;ISO]
[GO:0000441 "SSL2-core TFIIH complex" evidence=IDA] [GO:0001666
"response to hypoxia" evidence=IEP] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0005819 "spindle" evidence=ISO]
[GO:0006281 "DNA repair" evidence=ISO] [GO:0006283
"transcription-coupled nucleotide-excision repair"
evidence=IEA;ISO] [GO:0006289 "nucleotide-excision repair"
evidence=ISO] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0006468 "protein phosphorylation"
evidence=ISO] [GO:0006915 "apoptotic process" evidence=IEA;ISO]
[GO:0006917 "induction of apoptosis" evidence=IEA;ISO] [GO:0006979
"response to oxidative stress" evidence=IEA;ISO] [GO:0007059
"chromosome segregation" evidence=IEA;ISO] [GO:0007568 "aging"
evidence=IEA;ISO] [GO:0008022 "protein C-terminus binding"
evidence=IEA;ISO] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0008353 "RNA polymerase II carboxy-terminal
domain kinase activity" evidence=IEA;ISO] [GO:0009411 "response to
UV" evidence=ISO] [GO:0009650 "UV protection" evidence=IEA;ISO]
[GO:0009791 "post-embryonic development" evidence=IEA;ISO]
[GO:0019907 "cyclin-dependent protein kinase activating kinase
holoenzyme complex" evidence=IEA;ISO] [GO:0021510 "spinal cord
development" evidence=IEA;ISO] [GO:0022405 "hair cycle process"
evidence=ISO] [GO:0030198 "extracellular matrix organization"
evidence=IEA;ISO] [GO:0030282 "bone mineralization"
evidence=IEA;ISO] [GO:0032289 "central nervous system myelin
formation" evidence=IEA;ISO] [GO:0033683 "nucleotide-excision
repair, DNA incision" evidence=IEA;ISO] [GO:0035264 "multicellular
organism growth" evidence=IEA;ISO] [GO:0035315 "hair cell
differentiation" evidence=IEA;ISO] [GO:0040016 "embryonic cleavage"
evidence=IEA;ISO] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA;ISO] [GO:0043139 "5'-3' DNA helicase
activity" evidence=IEA;ISO] [GO:0043249 "erythrocyte maturation"
evidence=IEA;ISO] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA;ISO] [GO:0043588 "skin development" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0048820 "hair
follicle maturation" evidence=IEA;ISO] [GO:0060218 "hematopoietic
stem cell differentiation" evidence=IEA;ISO] [GO:0071817 "MMXD
complex" evidence=IEA;ISO] [GO:0004672 "protein kinase activity"
evidence=ISO] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO] InterPro:IPR001945 InterPro:IPR002464
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR010643 InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777
Pfam:PF13307 PRINTS:PR00852 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 RGD:1309109 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005737 GO:GO:0006915 GO:GO:0043066
GO:GO:0043588 GO:GO:0007059 GO:GO:0006979 GO:GO:0006917
GO:GO:0003677 GO:GO:0008283 GO:GO:0007568 GO:GO:0001701
GO:GO:0001666 GO:GO:0045944 GO:GO:0030198 GO:GO:0040016
GO:GO:0009791 GO:GO:0060218 GO:GO:0004003 GO:GO:0035264
GO:GO:0071817 GO:GO:0021510 GO:GO:0030282 GO:GO:0000075
EMBL:CH473979 GO:GO:0043388 GO:GO:0008353 GO:GO:0009650
GO:GO:0019907 GO:GO:0006283 TIGRFAMs:TIGR00604 GO:GO:0035315
GO:GO:0043139 GO:GO:0043249 KO:K10844 CTD:2068 GO:GO:0033683
OrthoDB:EOG4BVRT2 GO:GO:0000441 GO:GO:0032289 GO:GO:0048820
GeneTree:ENSGT00550000075092 IPI:IPI00367025 RefSeq:NP_001166280.1
UniGene:Rn.41871 Ensembl:ENSRNOT00000024246 GeneID:308415
KEGG:rno:308415 NextBio:658821 Uniprot:D3ZEG9
Length = 760
Score = 169 (64.5 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 51/208 (24%), Positives = 97/208 (46%)
Query: 475 KNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQL-FGSLGVPESRI 533
+ P ++ + + ++ + + + +S+I+ GT+ P+ + L F + +
Sbjct: 424 RTPTITNPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT--- 480
Query: 534 HHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMV 593
F+ + + + P+I+ G FE R ++ + + +VP G+V
Sbjct: 481 --FTM--TLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIV 536
Query: 594 CFFPSYDY-EAIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDYGTSVEKG- 651
FF SY Y E+ V ++ +E I R K++F E + +E L Y + E G
Sbjct: 537 AFFTSYQYMESTVASWYEQG-ILENIQR---NKLLFIETQDGAETSVALEKYQEACENGR 592
Query: 652 GALMLSVIGGKLSEGLNFSDDLGRCVVV 679
GA++LSV GK+SEG++F GR V++
Sbjct: 593 GAILLSVARGKVSEGIDFVHHYGRAVIM 620
>TIGR_CMR|BA_3376 [details] [associations]
symbol:BA_3376 "histidyl-tRNA synthetase" species:198094
"Bacillus anthracis str. Ames" [GO:0004821 "histidine-tRNA ligase
activity" evidence=ISS] [GO:0006427 "histidyl-tRNA aminoacylation"
evidence=ISS] InterPro:IPR004516 InterPro:IPR006195
InterPro:IPR015807 PIRSF:PIRSF001549 PROSITE:PS50862
InterPro:IPR004154 HAMAP:MF_00127 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR SUPFAM:SSF52954
Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476 eggNOG:COG0124
KO:K01892 RefSeq:NP_845662.1 RefSeq:YP_020009.1 RefSeq:YP_029387.1
ProteinModelPortal:Q81N41 PRIDE:Q81N41 DNASU:1084846
EnsemblBacteria:EBBACT00000009540 EnsemblBacteria:EBBACT00000015380
EnsemblBacteria:EBBACT00000023769 GeneID:1084846 GeneID:2818918
GeneID:2850350 KEGG:ban:BA_3376 KEGG:bar:GBAA_3376 KEGG:bat:BAS3130
HOGENOM:HOG000018071 OMA:NKIKRAC ProtClustDB:PRK12420
BioCyc:BANT260799:GJAJ-3192-MONOMER
BioCyc:BANT261594:GJ7F-3301-MONOMER GO:GO:0004821 GO:GO:0006427
TIGRFAMs:TIGR00442 Uniprot:Q81N41
Length = 425
Score = 165 (63.1 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 49/178 (27%), Positives = 86/178 (48%)
Query: 4 EKNLSPEVADKIGEYVLKHGHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIYGLK 63
E+ +S E+AD I VL + + + + F + +G+ ++ L Y G+
Sbjct: 203 ERGISEEMADTICNTVLSCLQLSIAD--FKEAF--NNPLVADGVNELQQLQQYLIALGIN 258
Query: 64 DTIVFDLSLARGLDYYTGVIYEAVLKDQAV-GSVAGGGRYDNLVGMFDPKNKTTPCVAAK 122
+ +F+ LARGL YTG +YE LKD ++ S+ GGRYDN++G F + + P V
Sbjct: 259 ENTIFNPFLARGLTMYTGTVYEIFLKDGSITSSIGSGGRYDNIIGAFRGDDMSYPTVGIS 318
Query: 123 LLHEV--QGLLETSCRSCREDIGVERLFSIIENRNAEQGVKVKTTSTQVYVASAQKNL 178
+V L + S D+ + L + ++ Q ++ TTS ++ + A + L
Sbjct: 319 FGLDVIYTALSQKETISSTADVFIIPLGTELQCLQIAQQLR-STTSLKIELELAGRKL 375
>UNIPROTKB|F1PMH9 [details] [associations]
symbol:ERCC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001945 InterPro:IPR002464 InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR010643
InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777 Pfam:PF13307
PRINTS:PR00852 PROSITE:PS00690 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004003 GO:GO:0006289 TIGRFAMs:TIGR00604
OMA:KDVDGKC GeneTree:ENSGT00550000075092 EMBL:AAEX03000876
Ensembl:ENSCAFT00000007249 Uniprot:F1PMH9
Length = 771
Score = 169 (64.5 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 51/208 (24%), Positives = 97/208 (46%)
Query: 475 KNPELSKSHIKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQL-FGSLGVPESRI 533
+ P ++ + + ++ + + + +S+I+ GT+ P+ + L F + +
Sbjct: 436 RTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT--- 492
Query: 534 HHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMV 593
F+ + + + P+I+ G FE R ++ + + +VP G+V
Sbjct: 493 --FTM--TLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIV 548
Query: 594 CFFPSYDY-EAIVYNYMRDNHFIERIARIAKKKVVFREPKKTSEVDKVLSDYGTSVEKG- 651
FF SY Y E+ V ++ +E I R K++F E + +E L Y + E G
Sbjct: 549 AFFTSYQYMESTVASWYEQG-ILENIQR---NKLLFIETQDGAETSVALEKYQEACENGR 604
Query: 652 GALMLSVIGGKLSEGLNFSDDLGRCVVV 679
GA++LSV GK+SEG++F GR V++
Sbjct: 605 GAILLSVARGKVSEGIDFVHHYGRAVIM 632
>UNIPROTKB|J3QKX0 [details] [associations]
symbol:BRIP1 "Fanconi anemia group J protein" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR006555 Pfam:PF13307
SMART:SM00491 GO:GO:0005524 GO:GO:0003676 GO:GO:0008026
EMBL:AC002994 EMBL:AC005969 EMBL:AC060798 HGNC:HGNC:20473
Ensembl:ENST00000584322 Uniprot:J3QKX0
Length = 180
Score = 138 (53.6 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 37/114 (32%), Positives = 63/114 (55%)
Query: 576 EIAMTITNLCTIVPKGMVCFFPSYDY-EAIVYNYMRDN--HFIERIARIAKKKVVFREPK 632
E+ + ++C V +G++CF PSY E + ++ H +E + K V EP+
Sbjct: 3 EVGALLLSVCQTVSQGILCFLPSYKLLEKLKERWLSTGLWHNLELV------KTVIVEPQ 56
Query: 633 --KTSEVDKVLSDYGTSV----EKGGALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
+ + D++L Y ++ EK GAL+++V GK+SEGL+FSDD R V+ +
Sbjct: 57 GGEKTNFDELLQVYYDAIKYKGEKDGALLVAVCRGKVSEGLDFSDDNARAVITI 110
>TAIR|locus:2030497 [details] [associations]
symbol:AT1G20720 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006261
"DNA-dependent DNA replication" evidence=RCA] InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 EMBL:CP002684 GO:GO:0005739 GO:GO:0005524
GO:GO:0003677 GO:GO:0004003 KO:K15362 OMA:EKELDDS IPI:IPI00524588
RefSeq:NP_173495.5 UniGene:At.51696 ProteinModelPortal:F4HUN4
SMR:F4HUN4 PRIDE:F4HUN4 EnsemblPlants:AT1G20720.1 GeneID:838662
KEGG:ath:AT1G20720 Uniprot:F4HUN4
Length = 1175
Score = 160 (61.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 45/163 (27%), Positives = 75/163 (46%)
Query: 489 LNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI-PKENI 547
+NPA F D+ + S+I+ GT+ P++ F +L G HVI P +
Sbjct: 469 MNPAVVFKDLADISLSVILTSGTLSPMNSFSSELGMQFGTS------LEAPHVIDPNMQV 522
Query: 548 LPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDYEAIVYN 607
+ +GP+N + +++ + ++ +CTIVP G + FFPSY +
Sbjct: 523 WAGAISNGPSNYPLNASYKTADAYSFQDALGKSLEEICTIVPGGSLVFFPSYKLMEKLCM 582
Query: 608 YMRDNHFIERIARIAKKKVVFREPK--KTSEVDKVLSDYGTSV 648
R+ E+ +R+ KK +F EP+ E D VL Y S+
Sbjct: 583 RWRET---EQWSRLCLKKDLFVEPRGGAQDEFDSVLKGYYDSI 622
Score = 132 (51.5 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 31/112 (27%), Positives = 53/112 (47%)
Query: 279 LNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVI-PKENI 337
+NPA F D+ + S+I+ GT+ P++ F +L G HVI P +
Sbjct: 469 MNPAVVFKDLADISLSVILTSGTLSPMNSFSSELGMQFGTS------LEAPHVIDPNMQV 522
Query: 338 LPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSY 389
+ +GP+N + +++ + ++ +CTIVP G + FFPSY
Sbjct: 523 WAGAISNGPSNYPLNASYKTADAYSFQDALGKSLEEICTIVPGGSLVFFPSY 574
Score = 84 (34.6 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 18/58 (31%), Positives = 35/58 (60%)
Query: 623 KKKVVFREPKKTSEVDKVLSDYGTSVEKGGALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
K K++ R ++ + + ++ +KG A L+V GK+SEG++F+DD R V+++
Sbjct: 625 KNKIIGRN-RRAKKAGPIKTETQDDSKKGAAF-LAVCRGKVSEGIDFADDNARAVIIV 680
Score = 40 (19.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 316 LGVPESRIHHFSCGHVIPKENI 337
+ V SR H+ + HV+ K+N+
Sbjct: 177 MAVLASRKHYCTNRHVLGKDNV 198
>WB|WBGene00009124 [details] [associations]
symbol:rtel-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 GO:GO:0010569
eggNOG:COG1199 TIGRFAMs:TIGR00604 GeneTree:ENSGT00530000063199
EMBL:Z79754 KO:K11136 OMA:PFPPLKD HOGENOM:HOG000154218 EMBL:Z83224
PIR:T21356 RefSeq:NP_492769.1 ProteinModelPortal:Q93575 SMR:Q93575
IntAct:Q93575 MINT:MINT-227415 STRING:Q93575 PaxDb:Q93575
EnsemblMetazoa:F25H2.13.1 EnsemblMetazoa:F25H2.13.2 GeneID:172946
KEGG:cel:CELE_F25H2.13 UCSC:F25H2.13 CTD:172946 WormBase:F25H2.13
InParanoid:Q93575 NextBio:877635 Uniprot:Q93575
Length = 994
Score = 160 (61.4 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 52/219 (23%), Positives = 105/219 (47%)
Query: 470 RILVTKNPELSKSHIKYILLNPANHFTDI-VQDARSIIVAGGTMEPVSEFKDQLFGSLG- 527
++ + K+ + K IKY + + ++ R++++A GT+ P+ F + + G
Sbjct: 451 KLYIQKDKDNEKLTIKYFCFQASISMRMLKMRGVRNVLLASGTLSPIQAFTYNMGLNFGA 510
Query: 528 VPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTI 587
+ E+ H + + +L I+ G +F+NR D + +A + + +
Sbjct: 511 ILENE-------HALKQVPVLTSIVTRGKRGGLAG-SFQNRKNLDYVTGVAEALLRVMEV 562
Query: 588 VPKGMVCFFPSYDY-EAIVYNYMR---DNHFIERI-ARIAKKKVVFREPKKTSEVDKVLS 642
+P+G++ FF SY + +V + ++ E ++ K K V EP+ E+ +
Sbjct: 563 IPQGILIFFSSYSQMDELVATWKTTKWSSNSNESFWEKMEKTKRVVVEPRAKEELAAIRL 622
Query: 643 DYGTSV-EKGGALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
Y V E+ GA +L+V GK+SEG++F D R V+++
Sbjct: 623 RYTQGVSEQHGAALLAVCRGKVSEGIDFCDAESRAVIII 661
>UNIPROTKB|Q93575 [details] [associations]
symbol:rtel-1 "Regulator of telomere elongation helicase 1
homolog" species:6239 "Caenorhabditis elegans" [GO:0005634
"nucleus" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=IGI] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=ISS] InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0006281
GO:GO:0051539 GO:GO:0004003 GO:GO:0010569 eggNOG:COG1199
TIGRFAMs:TIGR00604 GeneTree:ENSGT00530000063199 EMBL:Z79754
KO:K11136 OMA:PFPPLKD HOGENOM:HOG000154218 EMBL:Z83224 PIR:T21356
RefSeq:NP_492769.1 ProteinModelPortal:Q93575 SMR:Q93575
IntAct:Q93575 MINT:MINT-227415 STRING:Q93575 PaxDb:Q93575
EnsemblMetazoa:F25H2.13.1 EnsemblMetazoa:F25H2.13.2 GeneID:172946
KEGG:cel:CELE_F25H2.13 UCSC:F25H2.13 CTD:172946 WormBase:F25H2.13
InParanoid:Q93575 NextBio:877635 Uniprot:Q93575
Length = 994
Score = 160 (61.4 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 52/219 (23%), Positives = 105/219 (47%)
Query: 470 RILVTKNPELSKSHIKYILLNPANHFTDI-VQDARSIIVAGGTMEPVSEFKDQLFGSLG- 527
++ + K+ + K IKY + + ++ R++++A GT+ P+ F + + G
Sbjct: 451 KLYIQKDKDNEKLTIKYFCFQASISMRMLKMRGVRNVLLASGTLSPIQAFTYNMGLNFGA 510
Query: 528 VPESRIHHFSCGHVIPKENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTI 587
+ E+ H + + +L I+ G +F+NR D + +A + + +
Sbjct: 511 ILENE-------HALKQVPVLTSIVTRGKRGGLAG-SFQNRKNLDYVTGVAEALLRVMEV 562
Query: 588 VPKGMVCFFPSYDY-EAIVYNYMR---DNHFIERI-ARIAKKKVVFREPKKTSEVDKVLS 642
+P+G++ FF SY + +V + ++ E ++ K K V EP+ E+ +
Sbjct: 563 IPQGILIFFSSYSQMDELVATWKTTKWSSNSNESFWEKMEKTKRVVVEPRAKEELAAIRL 622
Query: 643 DYGTSV-EKGGALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
Y V E+ GA +L+V GK+SEG++F D R V+++
Sbjct: 623 RYTQGVSEQHGAALLAVCRGKVSEGIDFCDAESRAVIII 661
>UNIPROTKB|H0YFY8 [details] [associations]
symbol:DDX11 "Probable ATP-dependent RNA helicase DDX11"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0032508 "DNA
duplex unwinding" evidence=IEA] InterPro:IPR006555
InterPro:IPR027076 Pfam:PF13307 SMART:SM00491 GO:GO:0005524
GO:GO:0003676 GO:GO:0008026 PANTHER:PTHR11472:SF5 HGNC:HGNC:2736
EMBL:AC008013 Ensembl:ENST00000539702 Uniprot:H0YFY8
Length = 172
Score = 124 (48.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 22/29 (75%), Positives = 29/29 (100%)
Query: 652 GALMLSVIGGKLSEGLNFSDDLGRCVVVM 680
GAL+LSV+GGK+SEG+NFSD+LGRCVV++
Sbjct: 34 GALLLSVVGGKMSEGINFSDNLGRCVVMV 62
>TAIR|locus:2075306 [details] [associations]
symbol:HRS1 "Histidyl-tRNA synthetase 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004812 "aminoacyl-tRNA ligase activity"
evidence=IEA] [GO:0004821 "histidine-tRNA ligase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006418 "tRNA
aminoacylation for protein translation" evidence=IEA] [GO:0006427
"histidyl-tRNA aminoacylation" evidence=IEA;ISS] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] InterPro:IPR002314 InterPro:IPR004516
InterPro:IPR006195 InterPro:IPR015807 Pfam:PF00587
PIRSF:PIRSF001549 PROSITE:PS50862 InterPro:IPR004154 HAMAP:MF_00127
GO:GO:0005739 GO:GO:0005524 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF52954 Gene3D:3.40.50.800
Pfam:PF03129 EMBL:AL355775 PANTHER:PTHR11476 eggNOG:COG0124
KO:K01892 GO:GO:0004821 GO:GO:0006427 TIGRFAMs:TIGR00442
BRENDA:6.1.1.21 EMBL:AF020715 EMBL:AY056233 EMBL:AY117252
IPI:IPI00521949 PIR:T49251 RefSeq:NP_190196.1 UniGene:At.22106
HSSP:P60906 ProteinModelPortal:O82413 SMR:O82413 STRING:O82413
PaxDb:O82413 PRIDE:O82413 EnsemblPlants:AT3G46100.1 GeneID:823753
KEGG:ath:AT3G46100 TAIR:At3g46100 HOGENOM:HOG000018073
InParanoid:O82413 OMA:ENTQKGR PhylomeDB:O82413 ProtClustDB:PLN02530
ArrayExpress:O82413 Genevestigator:O82413 Uniprot:O82413
Length = 486
Score = 135 (52.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 43 AKEGLEAIKLLFHYCQIYGLKDTIVFDLSLARGLDYYTGVIYEAVLKDQAVGSVAGGGRY 102
A E + +K LF + +G + I FD S+ RGL YYTG+++E + + ++ GGGRY
Sbjct: 301 AGEAIADLKQLFSLAEKFGYSEWIQFDASVVRGLAYYTGIVFEGFDRKGKLRAICGGGRY 360
Query: 103 DNLVGMF 109
D L+ +
Sbjct: 361 DRLLSTY 367
>UNIPROTKB|H0YGL4 [details] [associations]
symbol:DDX11 "Probable ATP-dependent RNA helicase DDX11"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0032508 "DNA
duplex unwinding" evidence=IEA] InterPro:IPR006555
InterPro:IPR027076 Pfam:PF13307 SMART:SM00491 GO:GO:0005524
GO:GO:0003676 GO:GO:0008026 PANTHER:PTHR11472:SF5 HGNC:HGNC:2736
EMBL:AC008013 Ensembl:ENST00000545115 Uniprot:H0YGL4
Length = 76
Score = 109 (43.4 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 636 EVDKVLSDYGTSV-----EKG---GALMLSVIGGKLSEGLNFSDDLGR 675
+V++VL Y + E+G GAL+LSV+GGK+SEG+NFSD+LGR
Sbjct: 2 QVEQVLLAYSRCIQACGQERGQVTGALLLSVVGGKMSEGINFSDNLGR 49
>UNIPROTKB|I3LBL1 [details] [associations]
symbol:BRIP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 PROSITE:PS51193
GO:GO:0005524 GO:GO:0005737 GO:GO:0003677 GO:GO:0006357
GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
GeneTree:ENSGT00530000063199 EMBL:CU914462 EMBL:CU694840
Ensembl:ENSSSCT00000025154 OMA:TEAWDIE Uniprot:I3LBL1
Length = 709
Score = 131 (51.2 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 33/116 (28%), Positives = 54/116 (46%)
Query: 274 IKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIP 333
+ + LNPA F+DI +I++ GT+ P+ F +L GV + HVI
Sbjct: 594 LNFWCLNPAVAFSDINGKVWNIVLTSGTLSPMKSFSSEL----GVTFTI--QLEANHVIN 647
Query: 334 KENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSY 389
+ + SGP R TF++ E+ + ++C V +G++CF PSY
Sbjct: 648 NSQVWVGTIGSGPQGRNLCATFQHTETFAFQDEVGALLLSVCQTVSQGILCFLPSY 703
Score = 131 (51.2 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 33/116 (28%), Positives = 54/116 (46%)
Query: 484 IKYILLNPANHFTDIVQDARSIIVAGGTMEPVSEFKDQLFGSLGVPESRIHHFSCGHVIP 543
+ + LNPA F+DI +I++ GT+ P+ F +L GV + HVI
Sbjct: 594 LNFWCLNPAVAFSDINGKVWNIVLTSGTLSPMKSFSSEL----GVTFTI--QLEANHVIN 647
Query: 544 KENILPLILCSGPTNRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSY 599
+ + SGP R TF++ E+ + ++C V +G++CF PSY
Sbjct: 648 NSQVWVGTIGSGPQGRNLCATFQHTETFAFQDEVGALLLSVCQTVSQGILCFLPSY 703
>UNIPROTKB|A8WS58 [details] [associations]
symbol:rtel-1 "Regulator of telomere elongation helicase 1
homolog" species:6238 "Caenorhabditis briggsae" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0006281
GO:GO:0051539 GO:GO:0004003 GO:GO:0010569 eggNOG:COG1199
TIGRFAMs:TIGR00604 KO:K11136 EMBL:HE601486 RefSeq:XP_002639805.1
EnsemblMetazoa:CBG02256 GeneID:8581799 KEGG:cbr:CBG02256
CTD:8581799 WormBase:CBG02256 HOGENOM:HOG000154218 OMA:ENDIENQ
Uniprot:A8WS58
Length = 994
Score = 132 (51.5 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 44/190 (23%), Positives = 90/190 (47%)
Query: 499 VQDARSIIVAGGTMEPVSEFKDQLFGSLG-VPESRIHHFSCGHVIPKENILPLILCSGPT 557
++ R++++A GT+ P+ F + + G + E+ H + + +L I+ G
Sbjct: 479 MRGVRNVLLASGTLSPIQAFTYNMGLNFGAILENE-------HALKQVPVLTSIVTRGKH 531
Query: 558 NRKFDLTFENRTKGDTLKEIAMTITNLCTIVPKGMVCFFPSYDY-EAIVYNYMRDNHFI- 615
+F+NR + + ++ ++ + P+G++ FF SY + +V + +
Sbjct: 532 GGLVG-SFQNRKNIEYVSDVGESLIRVMETTPQGVLVFFSSYSQMDELVEVWKKTKRGAS 590
Query: 616 ---ERI-ARIAKKKVVFREPKKTSEVDKVLSDYGTSV-EKGGALMLSVIGGKLSEGLNFS 670
E ++ K K + EP+ ++ V Y V E GA +L+V GK+SEG++F
Sbjct: 591 DSPETFWEKMEKTKKIAVEPRAKEQLAAVRLRYTQGVSEPHGAALLAVCRGKVSEGIDFC 650
Query: 671 DDLGRCVVVM 680
D R V+++
Sbjct: 651 DAESRAVIIV 660
>TIGR_CMR|BA_1424 [details] [associations]
symbol:BA_1424 "histidyl-tRNA synthetase, putative"
species:198094 "Bacillus anthracis str. Ames" [GO:0004821
"histidine-tRNA ligase activity" evidence=ISS] [GO:0006427
"histidyl-tRNA aminoacylation" evidence=ISS] HAMAP:MF_00125
InterPro:IPR004516 InterPro:IPR004517 InterPro:IPR006195
PIRSF:PIRSF001549 PROSITE:PS50862 UniPathway:UPA00031 GO:GO:0005524
GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0006418 GO:GO:0004812 GO:GO:0000105
RefSeq:NP_843881.1 RefSeq:YP_018045.1 RefSeq:YP_027584.1
ProteinModelPortal:Q81T64 DNASU:1085929
EnsemblBacteria:EBBACT00000012552 EnsemblBacteria:EBBACT00000015149
EnsemblBacteria:EBBACT00000022213 GeneID:1085929 GeneID:2814620
GeneID:2850865 KEGG:ban:BA_1424 KEGG:bar:GBAA_1424 KEGG:bat:BAS1315
eggNOG:COG3705 HOGENOM:HOG000018077 KO:K02502 OMA:RGYHYHS
ProtClustDB:PRK12292 BioCyc:BANT260799:GJAJ-1389-MONOMER
BioCyc:BANT261594:GJ7F-1451-MONOMER PANTHER:PTHR11476
TIGRFAMs:TIGR00443 Uniprot:Q81T64
Length = 420
Score = 125 (49.1 bits), Expect = 0.00016, P = 0.00016
Identities = 29/88 (32%), Positives = 48/88 (54%)
Query: 23 GHVDLVENLLADEFLAKSKQAKEGLEAIKLLFHYCQIYGLKDTIVFDLSLARGLDYYTGV 82
G+++++E E LA S + K + +K ++ + G I DL + LDYYTGV
Sbjct: 222 GNLEVIEEA---EKLASSNEMKMAITRVKEIYEAIEKLGYGSYISIDLGTIQHLDYYTGV 278
Query: 83 IYEAVLKDQAVGS-VAGGGRYDNLVGMF 109
I++ + + +G + GGRYD L+G F
Sbjct: 279 IFKGYIYE--IGEEIVSGGRYDELIGNF 304
>TIGR_CMR|SPO_0667 [details] [associations]
symbol:SPO_0667 "histidyl-tRNA synthetase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0004821 "histidine-tRNA ligase
activity" evidence=ISS] [GO:0006427 "histidyl-tRNA aminoacylation"
evidence=ISS] InterPro:IPR004516 InterPro:IPR006195
InterPro:IPR015807 PIRSF:PIRSF001549 PROSITE:PS50862
InterPro:IPR004154 HAMAP:MF_00127 GO:GO:0005524 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR SUPFAM:SSF52954
Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476 eggNOG:COG0124
KO:K01892 HOGENOM:HOG000018071 GO:GO:0004821 GO:GO:0006427
TIGRFAMs:TIGR00442 ProtClustDB:PRK00037 OMA:RGERAQK
RefSeq:YP_165922.1 ProteinModelPortal:Q5LVN3 GeneID:3192980
KEGG:sil:SPO0667 PATRIC:23374601 Uniprot:Q5LVN3
Length = 495
Score = 124 (48.7 bits), Expect = 0.00027, P = 0.00027
Identities = 65/206 (31%), Positives = 89/206 (43%)
Query: 60 YGLKDTIVFDLSLARGLDYYTGVIYEAVL---------KDQAVGSVAGGGRYDNLVGMFD 110
YG D IV D S+ RGL YYTG +YEA L + + GSV+GGGRYD+LV F
Sbjct: 291 YG-PDRIVIDPSVVRGLGYYTGPVYEAELTFEIFDEKGRKRQFGSVSGGGRYDDLVKRFT 349
Query: 111 PKNKTTPCVAAKLLHEVQGLLETSCRSCREDIGVERLFSIIEN----RNAEQGVKVKTTS 166
+ P IGV+RL + + R AE+G V T
Sbjct: 350 --GQEVPATGVS-------------------IGVDRLLAALREKGRIRTAERGPVVVTVM 388
Query: 167 TQVYVASAQKNLVEPRMQ-LCHELWGGEKTQEKPKLSGLQSFLKGVQENNPNLSKPPEGG 225
+ +A Q + E R + E++ G PK G Q LK + N ++ EGG
Sbjct: 389 DRDRMADYQAMVAELRNAGIRAEVYLGN-----PKNFGNQ--LKYADKRNSPVAVI-EGG 440
Query: 226 IEEAPSQVQ-EDQVRNPMLSVVTFLE 250
E A VQ +D + ++ LE
Sbjct: 441 DERANGVVQIKDLILGAQIAANATLE 466
>TIGR_CMR|CBU_1248 [details] [associations]
symbol:CBU_1248 "histidyl-tRNA synthetase" species:227377
"Coxiella burnetii RSA 493" [GO:0004821 "histidine-tRNA ligase
activity" evidence=ISS] [GO:0006427 "histidyl-tRNA aminoacylation"
evidence=ISS] InterPro:IPR004516 InterPro:IPR006195
InterPro:IPR015807 PIRSF:PIRSF001549 PROSITE:PS50862
InterPro:IPR004154 HAMAP:MF_00127 GO:GO:0005524 GO:GO:0005737
EMBL:AE016828 GenomeReviews:AE016828_GR SUPFAM:SSF52954
Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476 eggNOG:COG0124
KO:K01892 GO:GO:0004821 GO:GO:0006427 TIGRFAMs:TIGR00442
HOGENOM:HOG000018072 ProtClustDB:PRK00037 RefSeq:NP_820243.1
ProteinModelPortal:Q83C80 GeneID:1209153 KEGG:cbu:CBU_1248
PATRIC:17931229 OMA:HCKEATA BioCyc:CBUR227377:GJ7S-1234-MONOMER
Uniprot:Q83C80
Length = 421
Score = 118 (46.6 bits), Expect = 0.00096, P = 0.00096
Identities = 36/96 (37%), Positives = 49/96 (51%)
Query: 55 HYCQIYGLKDT----IVFDLSLARGLDYYTGVIYEAVLKDQ--AVGSVAGGGRYDNLVGM 108
H+ Q+ L D + + +L RGLDYYT ++E V DQ A G+V GGRYDNLV +
Sbjct: 236 HFDQLRSLLDQAEVPFIVNPTLVRGLDYYTHTVFEWVT-DQLGAQGTVCAGGRYDNLVEL 294
Query: 109 FDPKNKTTPCVAAKLLHEVQGLLETSCRSCREDIGV 144
K+ AA L V LL + C + I +
Sbjct: 295 LGGKSTPAAGFAAGLERLV--LLLRGVQECLDKIDI 328
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.136 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 690 690 0.00080 121 3 11 22 0.42 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 140
No. of states in DFA: 604 (64 KB)
Total size of DFA: 323 KB (2160 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 65.64u 0.09s 65.73t Elapsed: 00:00:06
Total cpu time: 65.68u 0.10s 65.78t Elapsed: 00:00:06
Start: Thu Aug 15 13:20:59 2013 End: Thu Aug 15 13:21:05 2013
WARNINGS ISSUED: 1