BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12210
(405 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|442623865|ref|NP_001261017.1| slit, isoform F [Drosophila melanogaster]
gi|440214437|gb|AGB93549.1| slit, isoform F [Drosophila melanogaster]
Length = 2157
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 179/451 (39%), Positives = 243/451 (53%), Gaps = 77/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNNLT LP +F L RLR LR+S+N F CDCHLSWL R+L+ RL YT+C +PS
Sbjct: 226 TLNNNNLTSLPHNIFGGLGRLRALRLSDNPFACDCHLSWLSRFLRSATRLAPYTRCQSPS 285
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+KGQN+ D+ + EFKCSG E EC AE SCPHPCRCADGIVDCREK L VP+ LP
Sbjct: 286 QLKGQNVADLHDQEFKCSGLTEHAPMECGAENSCPHPCRCADGIVDCREKSLTSVPVTLP 345
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TTELRLEQN ITELPPK+F++++RLRRIDLS N IS++A DA GLK LT+L L N
Sbjct: 346 DDTTELRLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNK 405
Query: 184 LTYLPDGVF--------------------AELFR-------------------------- 197
+ LP GVF + FR
Sbjct: 406 IKDLPSGVFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAM 465
Query: 198 --LRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDC+L WL +L + P +C +P + + I + E +FKCS
Sbjct: 466 KSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMHRRRIESLREEKFKCS 525
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
E R K+ +GEC + CP C C VDC +GL +
Sbjct: 526 WD--ELRMKL--------------------SGECRMDSDCPAMCHCEGTTVDCTGRGLKE 563
Query: 316 VPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFAN 374
+P +P TTEL + + R+ L+ + + K L++N +T + P AF
Sbjct: 564 IPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVK------LELKRNQLTGIEPNAFEG 617
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ ++L +N I E+ K F +L+ +
Sbjct: 618 ASHIQELQLGENKIKEISNKMFLGLHQLKTL 648
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/274 (44%), Positives = 153/274 (55%), Gaps = 54/274 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L + N IT + + F + LR + L NQI+ + AF+GL L LTLNNNNLT LP
Sbjct: 177 LDISNNVITTVGRRVFKGAQSLRSLQLDNNQITCLDEHAFKGLVELEILTLNNNNLTSLP 236
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
+F L RLR LR+S+N F CDCHLSWL R+L+ RL YT+C +PS +KGQN+ D+
Sbjct: 237 HNIFGGLGRLRALRLSDNPFACDCHLSWLSRFLRSATRLAPYTRCQSPSQLKGQNVADLH 296
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EFKCSG + E EC AE SCPHPCRCADGIVDC
Sbjct: 297 DQEFKCSGLT------------------------EHAPMECGAENSCPHPCRCADGIVDC 332
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
REK L VP+ LP+ TTEL RLEQN ITELP
Sbjct: 333 REKSLTSVPVTLPDDTTEL------------------------------RLEQNFITELP 362
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
PK+F++++RLRRI L N+I+ + A + K+L
Sbjct: 363 PKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQL 396
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 197/446 (44%), Gaps = 76/446 (17%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
+NN+ L +G F + ++T+ +++N FICDC+L WL +L + P +C +P +
Sbjct: 451 DNNIQSLANGTFDAMKSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMH 510
Query: 67 GQNILDIPEHEFKCSGPV--EKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+ I + E +FKCS K +GEC + CP C C VDC +GL ++P +P
Sbjct: 511 RRRIESLREEKFKCSWDELRMKLSGECRMDSDCPAMCHCEGTTVDCTGRGLKEIPRDIPL 570
Query: 125 ATTEL-------------------------RLEQNDITELPPKAFANYKRLRRIDLSKNQ 159
TTEL L++N +T + P AF ++ + L +N+
Sbjct: 571 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 630
Query: 160 ISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
I +++ F GL L +L L +N ++ + G F L L +L ++ N F C+CHL+W
Sbjct: 631 IKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAE 690
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
WL++ G +C APS ++ I D+P EFKCS + E
Sbjct: 691 WLRKKSLNGGAARCGAPSKVRDVQIKDLPHSEFKCSSENSEG------------------ 732
Query: 280 CPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL------------ 327
C + CP C C +V C L ++P +P T+EL
Sbjct: 733 ---------CLGDGYCPPSCTCTGTVVRCSRNQLKEIPRGIPAETSELYLESNEIEQIHY 783
Query: 328 ---TYMVSIDRVD-----KVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLR 379
++ S+ R+D +L +Y N + + + + N + L A + LR
Sbjct: 784 ERIRHLRSLTRLDLSNNQITILSNYTFANLTKLS--TLIISYNKLQCLQRHALSGLNNLR 841
Query: 380 RIRLEQNDITELPPKAFANYKRLRRM 405
+ L N I+ LP +F + K L +
Sbjct: 842 VLSLHGNRISMLPEGSFEDLKSLTHI 867
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 154/332 (46%), Gaps = 46/332 (13%)
Query: 3 RTLN--NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCF 60
+TLN +N ++ + G F L L +L ++ N F C+CHL+W WL++ G +C
Sbjct: 646 KTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCG 705
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
APS ++ I D+P EFKCS E G C + CP C C +V C L ++P
Sbjct: 706 APSKVRDVQIKDLPHSEFKCSS--ENSEG-CLGDGYCPPSCTCTGTVVRCSRNQLKEIPR 762
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVA---------------- 164
+P T+EL LE N+I ++ + + + L R+DLS NQI+ ++
Sbjct: 763 GIPAETSELYLESNEIEQIHYERIRHLRSLTRLDLSNNQITILSNYTFANLTKLSTLIIS 822
Query: 165 --------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSW 216
A GL +L L+L+ N ++ LP+G F +L L + + N CDC L W
Sbjct: 823 YNKLQCLQRHALSGLNNLRVLSLHGNRISMLPEGSFEDLKSLTHIALGSNPLYCDCGLKW 882
Query: 217 LHRWLK-RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFH 275
W+K Y G+ +C P +K + IL P F C G R+ I +
Sbjct: 883 FSDWIKLDYVEPGI-ARCAEPEQMKDKLILSTPSSSFVCRG---RVRNDILAK------- 931
Query: 276 PYNSCPVEKP---TGECAAEPSCPHPCRCADG 304
N+C E+P +C A P + C C G
Sbjct: 932 -CNAC-FEQPCQNQAQCVALPQREYQCLCQPG 961
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 51/131 (38%), Gaps = 10/131 (7%)
Query: 278 NSCPVEKPTGECAA--EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDR 335
S + P G E CP C C VDC +GL VP + L +
Sbjct: 54 GSVGIHIPGGGVGVITEARCPRVCSCTGLNVDCSHRGLTSVPRKISADVERL----ELQG 109
Query: 336 VDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPK 394
+ ++Y +F+R T R +L N I + +F + L R+RL N + +P
Sbjct: 110 NNLTVIY---ETDFQRLTKLRMLQLTDNQIHTIERNSFQDLVSLERLRLNNNRLKAIPEN 166
Query: 395 AFANYKRLRRM 405
+ L R+
Sbjct: 167 FVTSSASLLRL 177
>gi|195334727|ref|XP_002034028.1| GM20113 [Drosophila sechellia]
gi|194125998|gb|EDW48041.1| GM20113 [Drosophila sechellia]
Length = 1506
Score = 311 bits (796), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 179/451 (39%), Positives = 243/451 (53%), Gaps = 77/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNNLT LP +F L RLR LR+S+N F CDCHLSWL R+L+ RL YT+C +PS
Sbjct: 228 TLNNNNLTSLPHNIFGGLGRLRALRLSDNPFACDCHLSWLSRFLRSATRLAPYTRCQSPS 287
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+KGQN+ D+ + EFKCSG E EC AE SCPHPCRCADGIVDCREK L VP+ LP
Sbjct: 288 QLKGQNVADLHDQEFKCSGLTEHAPMECGAENSCPHPCRCADGIVDCREKSLTSVPVTLP 347
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TTELRLEQN ITELPPK+F++++RLRRIDLS N IS++A DA GLK LT+L L N
Sbjct: 348 DDTTELRLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNK 407
Query: 184 LTYLPDGVF--------------------AELFR-------------------------- 197
+ LP GVF + FR
Sbjct: 408 IKDLPSGVFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAM 467
Query: 198 --LRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDC+L WL +L + P +C +P + + I + E +FKCS
Sbjct: 468 KSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMHRRRIESLREEKFKCS 527
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
E R K+ +GEC + CP C C VDC +GL +
Sbjct: 528 WD--ELRMKL--------------------SGECRMDSDCPAMCHCEGTTVDCTGRGLKE 565
Query: 316 VPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFAN 374
+P +P TTEL + + R+ L+ + + K L++N +T + P AF
Sbjct: 566 IPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVK------LELKRNQLTGIEPNAFEG 619
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ ++L +N I E+ K F +L+ +
Sbjct: 620 ASHIQELQLGENKIKEISNKMFLGLHQLKTL 650
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/274 (44%), Positives = 153/274 (55%), Gaps = 54/274 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L + N IT + + F + LR + L NQI+ + AF+GL L LTLNNNNLT LP
Sbjct: 179 LDISNNVITTVGRRVFKGAQSLRSLQLDNNQITCLDEHAFKGLVELEILTLNNNNLTSLP 238
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
+F L RLR LR+S+N F CDCHLSWL R+L+ RL YT+C +PS +KGQN+ D+
Sbjct: 239 HNIFGGLGRLRALRLSDNPFACDCHLSWLSRFLRSATRLAPYTRCQSPSQLKGQNVADLH 298
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EFKCSG + E EC AE SCPHPCRCADGIVDC
Sbjct: 299 DQEFKCSGLT------------------------EHAPMECGAENSCPHPCRCADGIVDC 334
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
REK L VP+ LP+ TTEL RLEQN ITELP
Sbjct: 335 REKSLTSVPVTLPDDTTEL------------------------------RLEQNFITELP 364
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
PK+F++++RLRRI L N+I+ + A + K+L
Sbjct: 365 PKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQL 398
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 197/446 (44%), Gaps = 76/446 (17%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
+NN+ L +G F + ++T+ +++N FICDC+L WL +L + P +C +P +
Sbjct: 453 DNNIQSLANGTFDAMKSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMH 512
Query: 67 GQNILDIPEHEFKCSGPV--EKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+ I + E +FKCS K +GEC + CP C C VDC +GL ++P +P
Sbjct: 513 RRRIESLREEKFKCSWDELRMKLSGECRMDSDCPAMCHCEGTTVDCTGRGLKEIPRDIPL 572
Query: 125 ATTEL-------------------------RLEQNDITELPPKAFANYKRLRRIDLSKNQ 159
TTEL L++N +T + P AF ++ + L +N+
Sbjct: 573 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 632
Query: 160 ISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
I +++ F GL L +L L +N ++ + G F L L +L ++ N F C+CHL+W
Sbjct: 633 IKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAE 692
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
WL++ G +C APS ++ I D+P EFKCS + E
Sbjct: 693 WLRKKSLNGGAARCGAPSKVRDVQIKDLPHSEFKCSSENSEG------------------ 734
Query: 280 CPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL------------ 327
C + CP C C +V C L ++P +P T+EL
Sbjct: 735 ---------CLGDGYCPPSCTCTGTVVRCSRNQLKEIPRGIPAETSELYLESNEIEQIHY 785
Query: 328 ---TYMVSIDRVD-----KVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLR 379
++ S+ R+D +L +Y N + + + + N + L A + LR
Sbjct: 786 ERIRHLRSLTRLDLSNNQITILSNYTFANLTKLS--TLIISYNKLQCLQRHALSGLNNLR 843
Query: 380 RIRLEQNDITELPPKAFANYKRLRRM 405
+ L N I+ LP +F + K L +
Sbjct: 844 VLSLHGNRISMLPEGSFEDLKSLTHI 869
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 154/332 (46%), Gaps = 46/332 (13%)
Query: 3 RTLN--NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCF 60
+TLN +N ++ + G F L L +L ++ N F C+CHL+W WL++ G +C
Sbjct: 648 KTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCG 707
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
APS ++ I D+P EFKCS E G C + CP C C +V C L ++P
Sbjct: 708 APSKVRDVQIKDLPHSEFKCSS--ENSEG-CLGDGYCPPSCTCTGTVVRCSRNQLKEIPR 764
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVA---------------- 164
+P T+EL LE N+I ++ + + + L R+DLS NQI+ ++
Sbjct: 765 GIPAETSELYLESNEIEQIHYERIRHLRSLTRLDLSNNQITILSNYTFANLTKLSTLIIS 824
Query: 165 --------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSW 216
A GL +L L+L+ N ++ LP+G F +L L + + N CDC L W
Sbjct: 825 YNKLQCLQRHALSGLNNLRVLSLHGNRISMLPEGSFEDLKSLTHIALGSNPLYCDCGLKW 884
Query: 217 LHRWLK-RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFH 275
W+K Y G+ +C P +K + IL P F C G R+ I +C+ F
Sbjct: 885 FSDWIKLDYVEPGI-ARCAEPEQMKDKLILSTPSSSFVCRG---RVRNDIL-AKCNACF- 938
Query: 276 PYNSCPVEKP---TGECAAEPSCPHPCRCADG 304
E+P +C A P + C C G
Sbjct: 939 -------EQPCQNQAQCVALPQREYQCLCQPG 963
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 8/116 (6%)
Query: 291 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFK 350
E CP C C VDC +GL VP + L + + ++Y +F+
Sbjct: 71 TEARCPRVCSCTGLNVDCSHRGLTSVPRKISADVERL----ELQGNNLTVIY---ETDFQ 123
Query: 351 RWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R T R +L N I + +F + L R+RL N + +P + L R+
Sbjct: 124 RLTKLRMLQLTDNQIHTIERNSFQDLVSLERLRLNNNRLKAIPENFVTSSASLLRL 179
>gi|198461203|ref|XP_001361946.2| GA21014 [Drosophila pseudoobscura pseudoobscura]
gi|198137269|gb|EAL26525.2| GA21014 [Drosophila pseudoobscura pseudoobscura]
Length = 1527
Score = 311 bits (796), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 179/451 (39%), Positives = 243/451 (53%), Gaps = 77/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNNLT LP F L RLR LR+S+N F CDCHLSWL R+L+ PRL YT+C +PS
Sbjct: 249 TLNNNNLTALPHNAFGGLGRLRALRLSDNPFACDCHLSWLSRYLRSAPRLAPYTRCQSPS 308
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+KGQN+ D+ + EFKCSG E EC AE SCPHPCRCADGIVDCREK L VP+ LP
Sbjct: 309 QLKGQNVADLHDQEFKCSGLTEHAPMECGAENSCPHPCRCADGIVDCREKSLTSVPVTLP 368
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TTELRLEQN ITELPPK+F++++RLRRIDLS N IS++A DA GLK LT+L L N
Sbjct: 369 DDTTELRLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNK 428
Query: 184 LTYLPDGVF--------------------AELFR-------------------------- 197
+ LP GVF + FR
Sbjct: 429 IKDLPSGVFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAM 488
Query: 198 --LRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDC+L WL +L + P +C +P + + I + E +FKCS
Sbjct: 489 KSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMHRRRIESLREEKFKCS 548
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
E R K+ +GEC + CP C C VDC +GL +
Sbjct: 549 WD--ELRMKL--------------------SGECRMDSDCPAMCHCEGTTVDCAGRGLKE 586
Query: 316 VPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFAN 374
+P +P TTEL + + ++ L+ + + K L++N +T + P AF
Sbjct: 587 IPRDIPLHTTELLLNDNELGSINSDGLFGRLPHLVK------LELKRNQLTGIEPNAFEG 640
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ ++L +N I E+ K F +L+ +
Sbjct: 641 ASHIQDLQLGENKIKEISNKMFLGLHQLKTL 671
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/274 (43%), Positives = 152/274 (55%), Gaps = 54/274 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L + N I + + F + LR + L NQ++ + AF+GL L LTLNNNNLT LP
Sbjct: 200 LDISHNVIATVGRRVFKGAQSLRSLQLDNNQVTCLDEHAFKGLVELEILTLNNNNLTALP 259
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F L RLR LR+S+N F CDCHLSWL R+L+ PRL YT+C +PS +KGQN+ D+
Sbjct: 260 HNAFGGLGRLRALRLSDNPFACDCHLSWLSRYLRSAPRLAPYTRCQSPSQLKGQNVADLH 319
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EFKCSG + E EC AE SCPHPCRCADGIVDC
Sbjct: 320 DQEFKCSGLT------------------------EHAPMECGAENSCPHPCRCADGIVDC 355
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
REK L VP+ LP+ TTEL RLEQN ITELP
Sbjct: 356 REKSLTSVPVTLPDDTTEL------------------------------RLEQNFITELP 385
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
PK+F++++RLRRI L N+I+ + A + K+L
Sbjct: 386 PKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQL 419
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 199/446 (44%), Gaps = 76/446 (17%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
+NN+ L +G F + ++T+ +++N FICDC+L WL +L + P +C +P +
Sbjct: 474 DNNIQSLANGTFDAMKSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMH 533
Query: 67 GQNILDIPEHEFKCSGPV--EKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+ I + E +FKCS K +GEC + CP C C VDC +GL ++P +P
Sbjct: 534 RRRIESLREEKFKCSWDELRMKLSGECRMDSDCPAMCHCEGTTVDCAGRGLKEIPRDIPL 593
Query: 125 ATTEL-------------------------RLEQNDITELPPKAFANYKRLRRIDLSKNQ 159
TTEL L++N +T + P AF ++ + L +N+
Sbjct: 594 HTTELLLNDNELGSINSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQDLQLGENK 653
Query: 160 ISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
I +++ F GL L +L L +N ++ + G F L L +L ++ N F C+CHL+W
Sbjct: 654 IKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAE 713
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
WL++ G +C APS ++ I D+P +EFKCS + E
Sbjct: 714 WLRKKSLNGGAARCAAPSKVRDVQIKDLPHNEFKCSSENSEG------------------ 755
Query: 280 CPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL------------ 327
C + CP C C +V C L ++P +P T+EL
Sbjct: 756 ---------CLGDGYCPPSCTCTGTVVRCSRNQLKEIPRGIPAETSELYLESNEIEQIHY 806
Query: 328 ---TYMVSIDRVD----KVLLYSYISNNFKRWTNRSRR-LEQNDITELPPKAFANYKRLR 379
++ S+ R+D ++ + S +N F T S + N + L A + LR
Sbjct: 807 ERIRHLRSLTRLDLSNNQITILS--NNTFANLTKLSTLIISYNKLQCLQRHALSGLNNLR 864
Query: 380 RIRLEQNDITELPPKAFANYKRLRRM 405
+ L N I+ LP +F + K L +
Sbjct: 865 VLSLHGNRISMLPEGSFEDLKSLTHI 890
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 138/281 (49%), Gaps = 31/281 (11%)
Query: 3 RTLN--NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCF 60
+TLN +N ++ + G F L L +L ++ N F C+CHL+W WL++ G +C
Sbjct: 669 KTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCA 728
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
APS ++ I D+P +EFKCS E G C + CP C C +V C L ++P
Sbjct: 729 APSKVRDVQIKDLPHNEFKCSS--ENSEG-CLGDGYCPPSCTCTGTVVRCSRNQLKEIPR 785
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAF------------ 168
+P T+EL LE N+I ++ + + + L R+DLS NQI+ ++ + F
Sbjct: 786 GIPAETSELYLESNEIEQIHYERIRHLRSLTRLDLSNNQITILSNNTFANLTKLSTLIIS 845
Query: 169 ------------QGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSW 216
GL +L L+L+ N ++ LP+G F +L L + + N CDC L W
Sbjct: 846 YNKLQCLQRHALSGLNNLRVLSLHGNRISMLPEGSFEDLKSLTHIALGSNPLYCDCSLKW 905
Query: 217 LHRWLK-RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K Y G+ +C P +K + IL P F C G
Sbjct: 906 FSDWIKLDYVEPGI-ARCAEPEQMKDKLILSTPSSNFVCRG 945
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 56/114 (49%)
Query: 93 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRR 152
E CP C C+ VDC +GL ++P + L L+ N++T + F +LR
Sbjct: 92 TEARCPRVCSCSGLTVDCSHRGLTQIPRKISADVERLDLQGNNLTVIYETDFQRLTKLRM 151
Query: 153 IDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
+ L+ NQI + ++FQ L SL L LNNN L +P+ L L IS N
Sbjct: 152 LQLTDNQIHTIERNSFQDLVSLERLRLNNNRLKAIPENFVTSSANLLRLDISHN 205
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 8/116 (6%)
Query: 291 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFK 350
E CP C C+ VDC +GL ++P + L + + ++Y +F+
Sbjct: 92 TEARCPRVCSCSGLTVDCSHRGLTQIPRKISADVERL----DLQGNNLTVIY---ETDFQ 144
Query: 351 RWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R T R +L N I + +F + L R+RL N + +P + L R+
Sbjct: 145 RLTKLRMLQLTDNQIHTIERNSFQDLVSLERLRLNNNRLKAIPENFVTSSANLLRL 200
>gi|17136484|ref|NP_476729.1| slit, isoform B [Drosophila melanogaster]
gi|21645372|gb|AAM70966.1| slit, isoform B [Drosophila melanogaster]
Length = 1469
Score = 311 bits (796), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 179/451 (39%), Positives = 243/451 (53%), Gaps = 77/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNNLT LP +F L RLR LR+S+N F CDCHLSWL R+L+ RL YT+C +PS
Sbjct: 202 TLNNNNLTSLPHNIFGGLGRLRALRLSDNPFACDCHLSWLSRFLRSATRLAPYTRCQSPS 261
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+KGQN+ D+ + EFKCSG E EC AE SCPHPCRCADGIVDCREK L VP+ LP
Sbjct: 262 QLKGQNVADLHDQEFKCSGLTEHAPMECGAENSCPHPCRCADGIVDCREKSLTSVPVTLP 321
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TTELRLEQN ITELPPK+F++++RLRRIDLS N IS++A DA GLK LT+L L N
Sbjct: 322 DDTTELRLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNK 381
Query: 184 LTYLPDGVF--------------------AELFR-------------------------- 197
+ LP GVF + FR
Sbjct: 382 IKDLPSGVFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAM 441
Query: 198 --LRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDC+L WL +L + P +C +P + + I + E +FKCS
Sbjct: 442 KSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMHRRRIESLREEKFKCS 501
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
E R K+ +GEC + CP C C VDC +GL +
Sbjct: 502 WD--ELRMKL--------------------SGECRMDSDCPAMCHCEGTTVDCTGRGLKE 539
Query: 316 VPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFAN 374
+P +P TTEL + + R+ L+ + + K L++N +T + P AF
Sbjct: 540 IPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVK------LELKRNQLTGIEPNAFEG 593
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ ++L +N I E+ K F +L+ +
Sbjct: 594 ASHIQELQLGENKIKEISNKMFLGLHQLKTL 624
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 135/358 (37%), Positives = 171/358 (47%), Gaps = 102/358 (28%)
Query: 93 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR- 151
E CP C C VDC +GL VP + L L+ N++T + F +LR
Sbjct: 69 TEARCPRVCSCTGLNVDCSHRGLTSVPRKISADVERLELQGNNLTVIYETDFQRLTKLRM 128
Query: 152 -----------------------RIDLSKNQISKVAVDAFQGLKSLTSL----------- 177
R+D+S N I+ V F+G +SL SL
Sbjct: 129 LQLTDNQIHTIERNSFQDLVSLERLDISNNVITTVGRRVFKGAQSLRSLQLDNNQITCLD 188
Query: 178 -------------TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRY 224
TLNNNNLT LP +F L RLR LR+S+N F CDCHLSWL R+L+
Sbjct: 189 EHAFKGLVELEILTLNNNNLTSLPHNIFGGLGRLRALRLSDNPFACDCHLSWLSRFLRSA 248
Query: 225 PRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEK 284
RL YT+C +PS +KGQN+ D+ + EFKCSG + E
Sbjct: 249 TRLAPYTRCQSPSQLKGQNVADLHDQEFKCSGLT------------------------EH 284
Query: 285 PTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSY 344
EC AE SCPHPCRCADGIVDCREK L VP+ LP+ TTEL
Sbjct: 285 APMECGAENSCPHPCRCADGIVDCREKSLTSVPVTLPDDTTEL----------------- 327
Query: 345 ISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
RLEQN ITELPPK+F++++RLRRI L N+I+ + A + K+L
Sbjct: 328 -------------RLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQL 372
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 197/446 (44%), Gaps = 76/446 (17%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
+NN+ L +G F + ++T+ +++N FICDC+L WL +L + P +C +P +
Sbjct: 427 DNNIQSLANGTFDAMKSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMH 486
Query: 67 GQNILDIPEHEFKCSGPV--EKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+ I + E +FKCS K +GEC + CP C C VDC +GL ++P +P
Sbjct: 487 RRRIESLREEKFKCSWDELRMKLSGECRMDSDCPAMCHCEGTTVDCTGRGLKEIPRDIPL 546
Query: 125 ATTEL-------------------------RLEQNDITELPPKAFANYKRLRRIDLSKNQ 159
TTEL L++N +T + P AF ++ + L +N+
Sbjct: 547 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 606
Query: 160 ISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
I +++ F GL L +L L +N ++ + G F L L +L ++ N F C+CHL+W
Sbjct: 607 IKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAE 666
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
WL++ G +C APS ++ I D+P EFKCS + E
Sbjct: 667 WLRKKSLNGGAARCGAPSKVRDVQIKDLPHSEFKCSSENSEG------------------ 708
Query: 280 CPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL------------ 327
C + CP C C +V C L ++P +P T+EL
Sbjct: 709 ---------CLGDGYCPPSCTCTGTVVRCSRNQLKEIPRGIPAETSELYLESNEIEQIHY 759
Query: 328 ---TYMVSIDRVD-----KVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLR 379
++ S+ R+D +L +Y N + + + + N + L A + LR
Sbjct: 760 ERIRHLRSLTRLDLSNNQITILSNYTFANLTKLS--TLIISYNKLQCLQRHALSGLNNLR 817
Query: 380 RIRLEQNDITELPPKAFANYKRLRRM 405
+ L N I+ LP +F + K L +
Sbjct: 818 VLSLHGNRISMLPEGSFEDLKSLTHI 843
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 154/332 (46%), Gaps = 46/332 (13%)
Query: 3 RTLN--NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCF 60
+TLN +N ++ + G F L L +L ++ N F C+CHL+W WL++ G +C
Sbjct: 622 KTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCG 681
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
APS ++ I D+P EFKCS E G C + CP C C +V C L ++P
Sbjct: 682 APSKVRDVQIKDLPHSEFKCSS--ENSEG-CLGDGYCPPSCTCTGTVVRCSRNQLKEIPR 738
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAV--------------- 165
+P T+EL LE N+I ++ + + + L R+DLS NQI+ ++
Sbjct: 739 GIPAETSELYLESNEIEQIHYERIRHLRSLTRLDLSNNQITILSNYTFANLTKLSTLIIS 798
Query: 166 ---------DAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSW 216
A GL +L L+L+ N ++ LP+G F +L L + + N CDC L W
Sbjct: 799 YNKLQCLQRHALSGLNNLRVLSLHGNRISMLPEGSFEDLKSLTHIALGSNPLYCDCGLKW 858
Query: 217 LHRWLK-RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFH 275
W+K Y G+ +C P +K + IL P F C G R+ I +C+ F
Sbjct: 859 FSDWIKLDYVEPGI-ARCAEPEQMKDKLILSTPSSSFVCRG---RVRNDIL-AKCNACF- 912
Query: 276 PYNSCPVEKP---TGECAAEPSCPHPCRCADG 304
E+P +C A P + C C G
Sbjct: 913 -------EQPCQNQAQCVALPQREYQCLCQPG 937
>gi|17136480|ref|NP_476727.1| slit, isoform C [Drosophila melanogaster]
gi|161077132|ref|NP_001097334.1| slit, isoform E [Drosophila melanogaster]
gi|33302576|sp|P24014.2|SLIT_DROME RecName: Full=Protein slit; Short=dSlit; Contains: RecName:
Full=Protein slit N-product; Contains: RecName:
Full=Protein slit C-product; Flags: Precursor
gi|7303028|gb|AAF58097.1| slit, isoform C [Drosophila melanogaster]
gi|157400354|gb|ABV53817.1| slit, isoform E [Drosophila melanogaster]
Length = 1504
Score = 310 bits (795), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 179/451 (39%), Positives = 243/451 (53%), Gaps = 77/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNNLT LP +F L RLR LR+S+N F CDCHLSWL R+L+ RL YT+C +PS
Sbjct: 226 TLNNNNLTSLPHNIFGGLGRLRALRLSDNPFACDCHLSWLSRFLRSATRLAPYTRCQSPS 285
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+KGQN+ D+ + EFKCSG E EC AE SCPHPCRCADGIVDCREK L VP+ LP
Sbjct: 286 QLKGQNVADLHDQEFKCSGLTEHAPMECGAENSCPHPCRCADGIVDCREKSLTSVPVTLP 345
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TTELRLEQN ITELPPK+F++++RLRRIDLS N IS++A DA GLK LT+L L N
Sbjct: 346 DDTTELRLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNK 405
Query: 184 LTYLPDGVF--------------------AELFR-------------------------- 197
+ LP GVF + FR
Sbjct: 406 IKDLPSGVFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAM 465
Query: 198 --LRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDC+L WL +L + P +C +P + + I + E +FKCS
Sbjct: 466 KSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMHRRRIESLREEKFKCS 525
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
E R K+ +GEC + CP C C VDC +GL +
Sbjct: 526 WD--ELRMKL--------------------SGECRMDSDCPAMCHCEGTTVDCTGRGLKE 563
Query: 316 VPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFAN 374
+P +P TTEL + + R+ L+ + + K L++N +T + P AF
Sbjct: 564 IPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVK------LELKRNQLTGIEPNAFEG 617
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ ++L +N I E+ K F +L+ +
Sbjct: 618 ASHIQELQLGENKIKEISNKMFLGLHQLKTL 648
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/274 (44%), Positives = 153/274 (55%), Gaps = 54/274 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L + N IT + + F + LR + L NQI+ + AF+GL L LTLNNNNLT LP
Sbjct: 177 LDISNNVITTVGRRVFKGAQSLRSLQLDNNQITCLDEHAFKGLVELEILTLNNNNLTSLP 236
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
+F L RLR LR+S+N F CDCHLSWL R+L+ RL YT+C +PS +KGQN+ D+
Sbjct: 237 HNIFGGLGRLRALRLSDNPFACDCHLSWLSRFLRSATRLAPYTRCQSPSQLKGQNVADLH 296
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EFKCSG + E EC AE SCPHPCRCADGIVDC
Sbjct: 297 DQEFKCSGLT------------------------EHAPMECGAENSCPHPCRCADGIVDC 332
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
REK L VP+ LP+ TTEL RLEQN ITELP
Sbjct: 333 REKSLTSVPVTLPDDTTEL------------------------------RLEQNFITELP 362
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
PK+F++++RLRRI L N+I+ + A + K+L
Sbjct: 363 PKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQL 396
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 197/446 (44%), Gaps = 76/446 (17%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
+NN+ L +G F + ++T+ +++N FICDC+L WL +L + P +C +P +
Sbjct: 451 DNNIQSLANGTFDAMKSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMH 510
Query: 67 GQNILDIPEHEFKCSGPV--EKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+ I + E +FKCS K +GEC + CP C C VDC +GL ++P +P
Sbjct: 511 RRRIESLREEKFKCSWDELRMKLSGECRMDSDCPAMCHCEGTTVDCTGRGLKEIPRDIPL 570
Query: 125 ATTEL-------------------------RLEQNDITELPPKAFANYKRLRRIDLSKNQ 159
TTEL L++N +T + P AF ++ + L +N+
Sbjct: 571 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 630
Query: 160 ISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
I +++ F GL L +L L +N ++ + G F L L +L ++ N F C+CHL+W
Sbjct: 631 IKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAE 690
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
WL++ G +C APS ++ I D+P EFKCS + E
Sbjct: 691 WLRKKSLNGGAARCGAPSKVRDVQIKDLPHSEFKCSSENSEG------------------ 732
Query: 280 CPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL------------ 327
C + CP C C +V C L ++P +P T+EL
Sbjct: 733 ---------CLGDGYCPPSCTCTGTVVRCSRNQLKEIPRGIPAETSELYLESNEIEQIHY 783
Query: 328 ---TYMVSIDRVD-----KVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLR 379
++ S+ R+D +L +Y N + + + + N + L A + LR
Sbjct: 784 ERIRHLRSLTRLDLSNNQITILSNYTFANLTKLS--TLIISYNKLQCLQRHALSGLNNLR 841
Query: 380 RIRLEQNDITELPPKAFANYKRLRRM 405
+ L N I+ LP +F + K L +
Sbjct: 842 VLSLHGNRISMLPEGSFEDLKSLTHI 867
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 154/332 (46%), Gaps = 46/332 (13%)
Query: 3 RTLN--NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCF 60
+TLN +N ++ + G F L L +L ++ N F C+CHL+W WL++ G +C
Sbjct: 646 KTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCG 705
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
APS ++ I D+P EFKCS E G C + CP C C +V C L ++P
Sbjct: 706 APSKVRDVQIKDLPHSEFKCSS--ENSEG-CLGDGYCPPSCTCTGTVVRCSRNQLKEIPR 762
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAV--------------- 165
+P T+EL LE N+I ++ + + + L R+DLS NQI+ ++
Sbjct: 763 GIPAETSELYLESNEIEQIHYERIRHLRSLTRLDLSNNQITILSNYTFANLTKLSTLIIS 822
Query: 166 ---------DAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSW 216
A GL +L L+L+ N ++ LP+G F +L L + + N CDC L W
Sbjct: 823 YNKLQCLQRHALSGLNNLRVLSLHGNRISMLPEGSFEDLKSLTHIALGSNPLYCDCGLKW 882
Query: 217 LHRWLK-RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFH 275
W+K Y G+ +C P +K + IL P F C G R+ I +C+ F
Sbjct: 883 FSDWIKLDYVEPGI-ARCAEPEQMKDKLILSTPSSSFVCRG---RVRNDIL-AKCNACF- 936
Query: 276 PYNSCPVEKP---TGECAAEPSCPHPCRCADG 304
E+P +C A P + C C G
Sbjct: 937 -------EQPCQNQAQCVALPQREYQCLCQPG 961
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 8/116 (6%)
Query: 291 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFK 350
E CP C C VDC +GL VP + L + + ++Y +F+
Sbjct: 69 TEARCPRVCSCTGLNVDCSHRGLTSVPRKISADVERL----ELQGNNLTVIY---ETDFQ 121
Query: 351 RWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R T R +L N I + +F + L R+RL N + +P + L R+
Sbjct: 122 RLTKLRMLQLTDNQIHTIERNSFQDLVSLERLRLNNNRLKAIPENFVTSSASLLRL 177
>gi|195583744|ref|XP_002081676.1| GD25590 [Drosophila simulans]
gi|194193685|gb|EDX07261.1| GD25590 [Drosophila simulans]
Length = 1506
Score = 310 bits (795), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 179/451 (39%), Positives = 243/451 (53%), Gaps = 77/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNNLT LP +F L RLR LR+S+N F CDCHLSWL R+L+ RL YT+C +PS
Sbjct: 228 TLNNNNLTSLPHNIFGGLGRLRALRLSDNPFACDCHLSWLSRFLRSATRLAPYTRCQSPS 287
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+KGQN+ D+ + EFKCSG E EC AE SCPHPCRCADGIVDCREK L VP+ LP
Sbjct: 288 QLKGQNVADLHDQEFKCSGLTEHAPMECGAENSCPHPCRCADGIVDCREKSLTSVPVTLP 347
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TTELRLEQN ITELPPK+F++++RLRRIDLS N IS++A DA GLK LT+L L N
Sbjct: 348 DDTTELRLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNK 407
Query: 184 LTYLPDGVF--------------------AELFR-------------------------- 197
+ LP GVF + FR
Sbjct: 408 IKDLPSGVFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAM 467
Query: 198 --LRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDC+L WL +L + P +C +P + + I + E +FKCS
Sbjct: 468 KSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMHRRRIESLREEKFKCS 527
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
E R K+ +GEC + CP C C VDC +GL +
Sbjct: 528 WD--ELRMKL--------------------SGECRMDSDCPAMCHCEGTTVDCTGRGLKE 565
Query: 316 VPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFAN 374
+P +P TTEL + + R+ L+ + + K L++N +T + P AF
Sbjct: 566 IPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVK------LELKRNQLTGIEPNAFEG 619
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ ++L +N I E+ K F +L+ +
Sbjct: 620 ASHIQELQLGENKIKEISNKMFLGLHQLKTL 650
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/274 (44%), Positives = 153/274 (55%), Gaps = 54/274 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L + N IT + + F + LR + L NQI+ + AF+GL L LTLNNNNLT LP
Sbjct: 179 LDISNNVITTVGRRVFKGAQSLRSLQLDNNQITCLDEHAFKGLVELEILTLNNNNLTSLP 238
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
+F L RLR LR+S+N F CDCHLSWL R+L+ RL YT+C +PS +KGQN+ D+
Sbjct: 239 HNIFGGLGRLRALRLSDNPFACDCHLSWLSRFLRSATRLAPYTRCQSPSQLKGQNVADLH 298
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EFKCSG + E EC AE SCPHPCRCADGIVDC
Sbjct: 299 DQEFKCSGLT------------------------EHAPMECGAENSCPHPCRCADGIVDC 334
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
REK L VP+ LP+ TTEL RLEQN ITELP
Sbjct: 335 REKSLTSVPVTLPDDTTEL------------------------------RLEQNFITELP 364
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
PK+F++++RLRRI L N+I+ + A + K+L
Sbjct: 365 PKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQL 398
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 197/446 (44%), Gaps = 76/446 (17%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
+NN+ L +G F + ++T+ +++N FICDC+L WL +L + P +C +P +
Sbjct: 453 DNNIQSLANGTFDAMKSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMH 512
Query: 67 GQNILDIPEHEFKCSGPV--EKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+ I + E +FKCS K +GEC + CP C C VDC +GL ++P +P
Sbjct: 513 RRRIESLREEKFKCSWDELRMKLSGECRMDSDCPAMCHCEGTTVDCTGRGLKEIPRDIPL 572
Query: 125 ATTEL-------------------------RLEQNDITELPPKAFANYKRLRRIDLSKNQ 159
TTEL L++N +T + P AF ++ + L +N+
Sbjct: 573 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 632
Query: 160 ISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
I +++ F GL L +L L +N ++ + G F L L +L ++ N F C+CHL+W
Sbjct: 633 IKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAE 692
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
WL++ G +C APS ++ I D+P EFKCS + E
Sbjct: 693 WLRKKSLNGGAARCGAPSKVRDVQIKDLPHSEFKCSSENSEG------------------ 734
Query: 280 CPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL------------ 327
C + CP C C +V C L ++P +P T+EL
Sbjct: 735 ---------CLGDGYCPPSCTCTGTVVRCSRNQLKEIPRGIPAETSELYLESNEIEQIHY 785
Query: 328 ---TYMVSIDRVD-----KVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLR 379
++ S+ R+D +L +Y N + + + + N + L A + LR
Sbjct: 786 ERIRHLRSLTRLDLSNNQITILSNYTFANLTKLS--TLIISYNKLQCLQRHALSGLNNLR 843
Query: 380 RIRLEQNDITELPPKAFANYKRLRRM 405
+ L N I+ LP +F + K L +
Sbjct: 844 VLSLHGNRISMLPEGSFEDLKSLTHI 869
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 154/332 (46%), Gaps = 46/332 (13%)
Query: 3 RTLN--NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCF 60
+TLN +N ++ + G F L L +L ++ N F C+CHL+W WL++ G +C
Sbjct: 648 KTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCG 707
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
APS ++ I D+P EFKCS E G C + CP C C +V C L ++P
Sbjct: 708 APSKVRDVQIKDLPHSEFKCSS--ENSEG-CLGDGYCPPSCTCTGTVVRCSRNQLKEIPR 764
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAV--------------- 165
+P T+EL LE N+I ++ + + + L R+DLS NQI+ ++
Sbjct: 765 GIPAETSELYLESNEIEQIHYERIRHLRSLTRLDLSNNQITILSNYTFANLTKLSTLIIS 824
Query: 166 ---------DAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSW 216
A GL +L L+L+ N ++ LP+G F +L L + + N CDC L W
Sbjct: 825 YNKLQCLQRHALSGLNNLRVLSLHGNRISMLPEGSFEDLKSLTHIALGSNPLYCDCGLKW 884
Query: 217 LHRWLK-RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFH 275
W+K Y G+ +C P +K + IL P F C G R+ I +C+ F
Sbjct: 885 FSDWIKLDYVEPGI-ARCAEPEQMKDKLILSTPSSSFVCRG---RVRNDIL-AKCNACF- 938
Query: 276 PYNSCPVEKP---TGECAAEPSCPHPCRCADG 304
E+P +C A P + C C G
Sbjct: 939 -------EQPCQNQAQCVALPQREYQCLCQPG 963
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 8/116 (6%)
Query: 291 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFK 350
E CP C C VDC +GL VP + L + + ++Y +F+
Sbjct: 71 TEARCPRVCSCTGLNVDCSHRGLTSVPRKISADVERL----ELQGNNLTVIY---ETDFQ 123
Query: 351 RWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R T R +L N I + +F + L R+RL N + +P + L R+
Sbjct: 124 RLTKLRMLQLTDNQIHTIERNSFQDLVSLERLRLNNNRLKAIPENFVTSSASLLRL 179
>gi|308818232|gb|ADO51076.1| RT09973p [Drosophila melanogaster]
Length = 1474
Score = 310 bits (795), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 179/451 (39%), Positives = 243/451 (53%), Gaps = 77/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNNLT LP +F L RLR LR+S+N F CDCHLSWL R+L+ RL YT+C +PS
Sbjct: 193 TLNNNNLTSLPHNIFGGLGRLRALRLSDNPFACDCHLSWLSRFLRSATRLAPYTRCQSPS 252
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+KGQN+ D+ + EFKCSG E EC AE SCPHPCRCADGIVDCREK L VP+ LP
Sbjct: 253 QLKGQNVADLHDQEFKCSGLTEHAPMECGAENSCPHPCRCADGIVDCREKSLTSVPVTLP 312
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TTELRLEQN ITELPPK+F++++RLRRIDLS N IS++A DA GLK LT+L L N
Sbjct: 313 DDTTELRLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNK 372
Query: 184 LTYLPDGVF--------------------AELFR-------------------------- 197
+ LP GVF + FR
Sbjct: 373 IKDLPSGVFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAM 432
Query: 198 --LRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDC+L WL +L + P +C +P + + I + E +FKCS
Sbjct: 433 KSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMHRRRIESLREEKFKCS 492
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
E R K+ +GEC + CP C C VDC +GL +
Sbjct: 493 WD--ELRMKL--------------------SGECRMDSDCPAMCHCEGTTVDCTGRGLKE 530
Query: 316 VPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFAN 374
+P +P TTEL + + R+ L+ + + K L++N +T + P AF
Sbjct: 531 IPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVK------LELKRNQLTGIEPNAFEG 584
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ ++L +N I E+ K F +L+ +
Sbjct: 585 ASHIQELQLGENKIKEISNKMFLGLHQLKTL 615
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/274 (44%), Positives = 153/274 (55%), Gaps = 54/274 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L + N IT + + F + LR + L NQI+ + AF+GL L LTLNNNNLT LP
Sbjct: 144 LDISNNVITTVGRRVFKGAQSLRSLQLDNNQITCLDEHAFKGLVELEILTLNNNNLTSLP 203
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
+F L RLR LR+S+N F CDCHLSWL R+L+ RL YT+C +PS +KGQN+ D+
Sbjct: 204 HNIFGGLGRLRALRLSDNPFACDCHLSWLSRFLRSATRLAPYTRCQSPSQLKGQNVADLH 263
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EFKCSG + E EC AE SCPHPCRCADGIVDC
Sbjct: 264 DQEFKCSGLT------------------------EHAPMECGAENSCPHPCRCADGIVDC 299
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
REK L VP+ LP+ TTEL RLEQN ITELP
Sbjct: 300 REKSLTSVPVTLPDDTTEL------------------------------RLEQNFITELP 329
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
PK+F++++RLRRI L N+I+ + A + K+L
Sbjct: 330 PKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQL 363
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 197/446 (44%), Gaps = 76/446 (17%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
+NN+ L +G F + ++T+ +++N FICDC+L WL +L + P +C +P +
Sbjct: 418 DNNIQSLANGTFDAMKSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMH 477
Query: 67 GQNILDIPEHEFKCSGPV--EKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+ I + E +FKCS K +GEC + CP C C VDC +GL ++P +P
Sbjct: 478 RRRIESLREEKFKCSWDELRMKLSGECRMDSDCPAMCHCEGTTVDCTGRGLKEIPRDIPL 537
Query: 125 ATTEL-------------------------RLEQNDITELPPKAFANYKRLRRIDLSKNQ 159
TTEL L++N +T + P AF ++ + L +N+
Sbjct: 538 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 597
Query: 160 ISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
I +++ F GL L +L L +N ++ + G F L L +L ++ N F C+CHL+W
Sbjct: 598 IKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAE 657
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
WL++ G +C APS ++ I D+P EFKCS + E
Sbjct: 658 WLRKKSLNGGAARCGAPSKVRDVQIKDLPHSEFKCSSENSEG------------------ 699
Query: 280 CPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL------------ 327
C + CP C C +V C L ++P +P T+EL
Sbjct: 700 ---------CLGDGYCPPSCTCTGTVVRCSRNQLKEIPRGIPAETSELYLESNEIEQIHY 750
Query: 328 ---TYMVSIDRVD-----KVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLR 379
++ S+ R+D +L +Y N + + + + N + L A + LR
Sbjct: 751 ERIRHLRSLTRLDLSNNQITILSNYTFANLTKLS--TLIISYNKLQCLQRHALSGLNNLR 808
Query: 380 RIRLEQNDITELPPKAFANYKRLRRM 405
+ L N I+ LP +F + K L +
Sbjct: 809 VLSLHGNRISMLPEGSFEDLKSLTHI 834
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 154/332 (46%), Gaps = 46/332 (13%)
Query: 3 RTLN--NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCF 60
+TLN +N ++ + G F L L +L ++ N F C+CHL+W WL++ G +C
Sbjct: 613 KTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCG 672
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
APS ++ I D+P EFKCS E G C + CP C C +V C L ++P
Sbjct: 673 APSKVRDVQIKDLPHSEFKCSS--ENSEG-CLGDGYCPPSCTCTGTVVRCSRNQLKEIPR 729
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAV--------------- 165
+P T+EL LE N+I ++ + + + L R+DLS NQI+ ++
Sbjct: 730 GIPAETSELYLESNEIEQIHYERIRHLRSLTRLDLSNNQITILSNYTFANLTKLSTLIIS 789
Query: 166 ---------DAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSW 216
A GL +L L+L+ N ++ LP+G F +L L + + N CDC L W
Sbjct: 790 YNKLQCLQRHALSGLNNLRVLSLHGNRISMLPEGSFEDLKSLTHIALGSNPLYCDCGLKW 849
Query: 217 LHRWLK-RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFH 275
W+K Y G+ +C P +K + IL P F C G R+ I +C+ F
Sbjct: 850 FSDWIKLDYVEPGI-ARCAEPEQMKDKLILSTPSSSFVCRG---RVRNDIL-AKCNACF- 903
Query: 276 PYNSCPVEKP---TGECAAEPSCPHPCRCADG 304
E+P +C A P + C C G
Sbjct: 904 -------EQPCQNQAQCVALPQREYQCLCQPG 928
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 8/116 (6%)
Query: 291 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFK 350
E CP C C VDC +GL VP + L + + ++Y +F+
Sbjct: 36 TEARCPRVCSCTGLNVDCSHRGLTSVPRKISADVERL----ELQGNNLTVIY---ETDFQ 88
Query: 351 RWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R T R +L N I + +F + L R+RL N + +P + L R+
Sbjct: 89 RLTKLRMLQLTDNQIHTIERNSFQDLVSLERLRLNNNRLKAIPENFVTSSASLLRL 144
>gi|324096448|gb|ADY17753.1| RT11125p [Drosophila melanogaster]
Length = 1468
Score = 310 bits (795), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 179/451 (39%), Positives = 243/451 (53%), Gaps = 77/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNNLT LP +F L RLR LR+S+N F CDCHLSWL R+L+ RL YT+C +PS
Sbjct: 190 TLNNNNLTSLPHNIFGGLGRLRALRLSDNPFACDCHLSWLSRFLRSATRLAPYTRCQSPS 249
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+KGQN+ D+ + EFKCSG E EC AE SCPHPCRCADGIVDCREK L VP+ LP
Sbjct: 250 QLKGQNVADLHDQEFKCSGLTEHAPMECGAENSCPHPCRCADGIVDCREKSLTSVPVTLP 309
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TTELRLEQN ITELPPK+F++++RLRRIDLS N IS++A DA GLK LT+L L N
Sbjct: 310 DDTTELRLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNK 369
Query: 184 LTYLPDGVF--------------------AELFR-------------------------- 197
+ LP GVF + FR
Sbjct: 370 IKDLPSGVFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAM 429
Query: 198 --LRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDC+L WL +L + P +C +P + + I + E +FKCS
Sbjct: 430 KSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMHRRRIESLREEKFKCS 489
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
E R K+ +GEC + CP C C VDC +GL +
Sbjct: 490 WD--ELRMKL--------------------SGECRMDSDCPAMCHCEGTTVDCTGRGLKE 527
Query: 316 VPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFAN 374
+P +P TTEL + + R+ L+ + + K L++N +T + P AF
Sbjct: 528 IPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVK------LELKRNQLTGIEPNAFEG 581
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ ++L +N I E+ K F +L+ +
Sbjct: 582 ASHIQELQLGENKIKEISNKMFLGLHQLKTL 612
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/274 (44%), Positives = 153/274 (55%), Gaps = 54/274 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L + N IT + + F + LR + L NQI+ + AF+GL L LTLNNNNLT LP
Sbjct: 141 LDISNNVITTVGRRVFKGAQSLRSLQLDNNQITCLDEHAFKGLVELEILTLNNNNLTSLP 200
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
+F L RLR LR+S+N F CDCHLSWL R+L+ RL YT+C +PS +KGQN+ D+
Sbjct: 201 HNIFGGLGRLRALRLSDNPFACDCHLSWLSRFLRSATRLAPYTRCQSPSQLKGQNVADLH 260
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EFKCSG + E EC AE SCPHPCRCADGIVDC
Sbjct: 261 DQEFKCSGLT------------------------EHAPMECGAENSCPHPCRCADGIVDC 296
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
REK L VP+ LP+ TTEL RLEQN ITELP
Sbjct: 297 REKSLTSVPVTLPDDTTEL------------------------------RLEQNFITELP 326
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
PK+F++++RLRRI L N+I+ + A + K+L
Sbjct: 327 PKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQL 360
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 197/446 (44%), Gaps = 76/446 (17%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
+NN+ L +G F + ++T+ +++N FICDC+L WL +L + P +C +P +
Sbjct: 415 DNNIQSLANGTFDAMKSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMH 474
Query: 67 GQNILDIPEHEFKCSGPV--EKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+ I + E +FKCS K +GEC + CP C C VDC +GL ++P +P
Sbjct: 475 RRRIESLREEKFKCSWDELRMKLSGECRMDSDCPAMCHCEGTTVDCTGRGLKEIPRDIPL 534
Query: 125 ATTEL-------------------------RLEQNDITELPPKAFANYKRLRRIDLSKNQ 159
TTEL L++N +T + P AF ++ + L +N+
Sbjct: 535 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 594
Query: 160 ISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
I +++ F GL L +L L +N ++ + G F L L +L ++ N F C+CHL+W
Sbjct: 595 IKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAE 654
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
WL++ G +C APS ++ I D+P EFKCS + E
Sbjct: 655 WLRKKSLNGGAARCGAPSKVRDVQIKDLPHSEFKCSSENSEG------------------ 696
Query: 280 CPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL------------ 327
C + CP C C +V C L ++P +P T+EL
Sbjct: 697 ---------CLGDGYCPPSCTCTGTVVRCSRNQLKEIPRGIPAETSELYLESNEIEQIHY 747
Query: 328 ---TYMVSIDRVD-----KVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLR 379
++ S+ R+D +L +Y N + + + + N + L A + LR
Sbjct: 748 ERIRHLRSLTRLDLSNNQITILSNYTFANLTKLS--TLIISYNKLQCLQRHALSGLNNLR 805
Query: 380 RIRLEQNDITELPPKAFANYKRLRRM 405
+ L N I+ LP +F + K L +
Sbjct: 806 VLSLHGNRISMLPEGSFEDLKSLTHI 831
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 154/332 (46%), Gaps = 46/332 (13%)
Query: 3 RTLN--NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCF 60
+TLN +N ++ + G F L L +L ++ N F C+CHL+W WL++ G +C
Sbjct: 610 KTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCG 669
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
APS ++ I D+P EFKCS E G C + CP C C +V C L ++P
Sbjct: 670 APSKVRDVQIKDLPHSEFKCSS--ENSEG-CLGDGYCPPSCTCTGTVVRCSRNQLKEIPR 726
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAV--------------- 165
+P T+EL LE N+I ++ + + + L R+DLS NQI+ ++
Sbjct: 727 GIPAETSELYLESNEIEQIHYERIRHLRSLTRLDLSNNQITILSNYTFANLTKLSTLIIS 786
Query: 166 ---------DAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSW 216
A GL +L L+L+ N ++ LP+G F +L L + + N CDC L W
Sbjct: 787 YNKLQCLQRHALSGLNNLRVLSLHGNRISMLPEGSFEDLKSLTHIALGSNPLYCDCGLKW 846
Query: 217 LHRWLK-RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFH 275
W+K Y G+ +C P +K + IL P F C G R+ I +C+ F
Sbjct: 847 FSDWIKLDYVEPGI-ARCAEPEQMKDKLILSTPSSSFVCRG---RVRNDIL-AKCNACF- 900
Query: 276 PYNSCPVEKP---TGECAAEPSCPHPCRCADG 304
E+P +C A P + C C G
Sbjct: 901 -------EQPCQNQAQCVALPQREYQCLCQPG 925
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 8/116 (6%)
Query: 291 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFK 350
E CP C C VDC +GL VP + L + + ++Y +F+
Sbjct: 33 TEARCPRVCSCTGLNVDCSHRGLTSVPRKISADVERL----ELQGNNLTVIY---ETDFQ 85
Query: 351 RWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R T R +L N I + +F + L R+RL N + +P + L R+
Sbjct: 86 RLTKLRMLQLTDNQIHTIERNSFQDLVSLERLRLNNNRLKAIPENFVTSSASLLRL 141
>gi|195488431|ref|XP_002092313.1| GE14122 [Drosophila yakuba]
gi|194178414|gb|EDW92025.1| GE14122 [Drosophila yakuba]
Length = 1507
Score = 310 bits (795), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 179/451 (39%), Positives = 243/451 (53%), Gaps = 77/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNNLT LP +F L RLR LR+S+N F CDCHLSWL R+L+ RL YT+C +PS
Sbjct: 229 TLNNNNLTSLPHNIFGGLGRLRALRLSDNPFACDCHLSWLSRFLRSATRLAPYTRCQSPS 288
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+KGQN+ D+ + EFKCSG E EC AE SCPHPCRCADGIVDCREK L VP+ LP
Sbjct: 289 QLKGQNVADLHDQEFKCSGLTEHAPMECGAENSCPHPCRCADGIVDCREKSLTSVPVTLP 348
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TTELRLEQN ITELPPK+F++++RLRRIDLS N IS++A DA GLK LT+L L N
Sbjct: 349 DDTTELRLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNK 408
Query: 184 LTYLPDGVF--------------------AELFR-------------------------- 197
+ LP GVF + FR
Sbjct: 409 IKDLPSGVFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAM 468
Query: 198 --LRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDC+L WL +L + P +C +P + + I + E +FKCS
Sbjct: 469 KSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMHRRRIESLREEKFKCS 528
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
E R K+ +GEC + CP C C VDC +GL +
Sbjct: 529 WD--ELRMKL--------------------SGECRMDSDCPAMCHCEGTTVDCTGRGLKE 566
Query: 316 VPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFAN 374
+P +P TTEL + + R+ L+ + + K L++N +T + P AF
Sbjct: 567 IPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVK------LELKRNQLTGIEPNAFEG 620
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ ++L +N I E+ K F +L+ +
Sbjct: 621 ASHIQELQLGENKIKEISNKMFLGLHQLKTL 651
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/274 (44%), Positives = 153/274 (55%), Gaps = 54/274 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L + N IT + + F + LR + L NQI+ + AF+GL L LTLNNNNLT LP
Sbjct: 180 LDISNNAITTVGRRVFKGAQSLRSLQLDNNQITCLDEHAFKGLVELEILTLNNNNLTSLP 239
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
+F L RLR LR+S+N F CDCHLSWL R+L+ RL YT+C +PS +KGQN+ D+
Sbjct: 240 HNIFGGLGRLRALRLSDNPFACDCHLSWLSRFLRSATRLAPYTRCQSPSQLKGQNVADLH 299
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EFKCSG + E EC AE SCPHPCRCADGIVDC
Sbjct: 300 DQEFKCSGLT------------------------EHAPMECGAENSCPHPCRCADGIVDC 335
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
REK L VP+ LP+ TTEL RLEQN ITELP
Sbjct: 336 REKSLTSVPVTLPDDTTEL------------------------------RLEQNFITELP 365
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
PK+F++++RLRRI L N+I+ + A + K+L
Sbjct: 366 PKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQL 399
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 197/446 (44%), Gaps = 76/446 (17%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
+NN+ L +G F + ++T+ +++N FICDC+L WL +L + P +C +P +
Sbjct: 454 DNNIQSLANGTFDAMKSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMH 513
Query: 67 GQNILDIPEHEFKCSGPV--EKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+ I + E +FKCS K +GEC + CP C C VDC +GL ++P +P
Sbjct: 514 RRRIESLREEKFKCSWDELRMKLSGECRMDSDCPAMCHCEGTTVDCTGRGLKEIPRDIPL 573
Query: 125 ATTEL-------------------------RLEQNDITELPPKAFANYKRLRRIDLSKNQ 159
TTEL L++N +T + P AF ++ + L +N+
Sbjct: 574 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 633
Query: 160 ISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
I +++ F GL L +L L +N ++ + G F L L +L ++ N F C+CHL+W
Sbjct: 634 IKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAE 693
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
WL++ G +C APS ++ I D+P EFKCS + E
Sbjct: 694 WLRKKSLNGGAARCGAPSKVRDVQIKDLPHSEFKCSSENSEG------------------ 735
Query: 280 CPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL------------ 327
C + CP C C +V C L ++P +P T+EL
Sbjct: 736 ---------CLGDGYCPPSCTCTGTVVRCSRNQLKEIPRGIPAETSELYLESNEIEQIHY 786
Query: 328 ---TYMVSIDRVD-----KVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLR 379
++ S+ R+D +L +Y N + + + + N + L A + LR
Sbjct: 787 ERIRHLRSLTRLDLSNNQITILSNYTFANLTKLS--TLIISYNKLQCLQRHALSGLNNLR 844
Query: 380 RIRLEQNDITELPPKAFANYKRLRRM 405
+ L N I+ LP +F + K L +
Sbjct: 845 VLSLHGNRISMLPEGSFEDLKSLTHI 870
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 154/332 (46%), Gaps = 46/332 (13%)
Query: 3 RTLN--NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCF 60
+TLN +N ++ + G F L L +L ++ N F C+CHL+W WL++ G +C
Sbjct: 649 KTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCG 708
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
APS ++ I D+P EFKCS E G C + CP C C +V C L ++P
Sbjct: 709 APSKVRDVQIKDLPHSEFKCSS--ENSEG-CLGDGYCPPSCTCTGTVVRCSRNQLKEIPR 765
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAV--------------- 165
+P T+EL LE N+I ++ + + + L R+DLS NQI+ ++
Sbjct: 766 GIPAETSELYLESNEIEQIHYERIRHLRSLTRLDLSNNQITILSNYTFANLTKLSTLIIS 825
Query: 166 ---------DAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSW 216
A GL +L L+L+ N ++ LP+G F +L L + + N CDC L W
Sbjct: 826 YNKLQCLQRHALSGLNNLRVLSLHGNRISMLPEGSFEDLKSLTHIALGSNPLYCDCGLKW 885
Query: 217 LHRWLK-RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFH 275
W+K Y G+ +C P +K + IL P F C G R+ I +C+ F
Sbjct: 886 FSDWIKLDYVEPGI-ARCAEPEQMKDKLILSTPSSSFVCRG---RVRNDIL-AKCNACF- 939
Query: 276 PYNSCPVEKP---TGECAAEPSCPHPCRCADG 304
E+P +C A P + C C G
Sbjct: 940 -------EQPCQNQAQCVALPQREYQCLCQPG 964
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 55/116 (47%)
Query: 93 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRR 152
E CP C C VDC +GL VP + L L+ N++T + F +LR
Sbjct: 72 TEARCPRVCSCTGLNVDCSHRGLTSVPRKISADVERLELQGNNLTVIYETDFQRLTKLRM 131
Query: 153 IDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L+ NQI + ++FQ L SL L LNNN L +P+ L L IS N+
Sbjct: 132 LQLTDNQIHTIERNSFQDLVSLERLRLNNNRLKAIPENFVTSSASLLRLDISNNAI 187
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 8/116 (6%)
Query: 291 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFK 350
E CP C C VDC +GL VP + L + + ++Y +F+
Sbjct: 72 TEARCPRVCSCTGLNVDCSHRGLTSVPRKISADVERL----ELQGNNLTVIY---ETDFQ 124
Query: 351 RWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R T R +L N I + +F + L R+RL N + +P + L R+
Sbjct: 125 RLTKLRMLQLTDNQIHTIERNSFQDLVSLERLRLNNNRLKAIPENFVTSSASLLRL 180
>gi|308193419|gb|ADO16251.1| RT09980p [Drosophila melanogaster]
Length = 1468
Score = 310 bits (795), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 179/451 (39%), Positives = 243/451 (53%), Gaps = 77/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNNLT LP +F L RLR LR+S+N F CDCHLSWL R+L+ RL YT+C +PS
Sbjct: 190 TLNNNNLTSLPHNIFGGLGRLRALRLSDNPFACDCHLSWLSRFLRSATRLAPYTRCQSPS 249
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+KGQN+ D+ + EFKCSG E EC AE SCPHPCRCADGIVDCREK L VP+ LP
Sbjct: 250 QLKGQNVADLHDQEFKCSGLTEHAPMECGAENSCPHPCRCADGIVDCREKSLTSVPVTLP 309
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TTELRLEQN ITELPPK+F++++RLRRIDLS N IS++A DA GLK LT+L L N
Sbjct: 310 DDTTELRLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNK 369
Query: 184 LTYLPDGVF--------------------AELFR-------------------------- 197
+ LP GVF + FR
Sbjct: 370 IKDLPSGVFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAM 429
Query: 198 --LRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDC+L WL +L + P +C +P + + I + E +FKCS
Sbjct: 430 KSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMHRRRIESLREEKFKCS 489
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
E R K+ +GEC + CP C C VDC +GL +
Sbjct: 490 WD--ELRMKL--------------------SGECRMDSDCPAMCHCEGTTVDCTGRGLKE 527
Query: 316 VPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFAN 374
+P +P TTEL + + R+ L+ + + K L++N +T + P AF
Sbjct: 528 IPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVK------LELKRNQLTGIEPNAFEG 581
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ ++L +N I E+ K F +L+ +
Sbjct: 582 ASHIQELQLGENKIKEISNKMFLGLHQLKTL 612
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/274 (44%), Positives = 153/274 (55%), Gaps = 54/274 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L + N IT + + F + LR + L NQI+ + AF+GL L LTLNNNNLT LP
Sbjct: 141 LDISNNVITTVGRRVFKGAQSLRSLQLDNNQITCLDEHAFKGLVELEILTLNNNNLTSLP 200
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
+F L RLR LR+S+N F CDCHLSWL R+L+ RL YT+C +PS +KGQN+ D+
Sbjct: 201 HNIFGGLGRLRALRLSDNPFACDCHLSWLSRFLRSATRLAPYTRCQSPSQLKGQNVADLH 260
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EFKCSG + E EC AE SCPHPCRCADGIVDC
Sbjct: 261 DQEFKCSGLT------------------------EHAPMECGAENSCPHPCRCADGIVDC 296
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
REK L VP+ LP+ TTEL RLEQN ITELP
Sbjct: 297 REKSLTSVPVTLPDDTTEL------------------------------RLEQNFITELP 326
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
PK+F++++RLRRI L N+I+ + A + K+L
Sbjct: 327 PKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQL 360
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 197/446 (44%), Gaps = 76/446 (17%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
+NN+ L +G F + ++T+ +++N FICDC+L WL +L + P +C +P +
Sbjct: 415 DNNIQSLANGTFDAMKSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMH 474
Query: 67 GQNILDIPEHEFKCSGPV--EKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+ I + E +FKCS K +GEC + CP C C VDC +GL ++P +P
Sbjct: 475 RRRIESLREEKFKCSWDELRMKLSGECRMDSDCPAMCHCEGTTVDCTGRGLKEIPRDIPL 534
Query: 125 ATTEL-------------------------RLEQNDITELPPKAFANYKRLRRIDLSKNQ 159
TTEL L++N +T + P AF ++ + L +N+
Sbjct: 535 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 594
Query: 160 ISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
I +++ F GL L +L L +N ++ + G F L L +L ++ N F C+CHL+W
Sbjct: 595 IKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAE 654
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
WL++ G +C APS ++ I D+P EFKCS + E
Sbjct: 655 WLRKKSLNGGAARCGAPSKVRDVQIKDLPHSEFKCSSENSEG------------------ 696
Query: 280 CPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL------------ 327
C + CP C C +V C L ++P +P T+EL
Sbjct: 697 ---------CLGDGYCPPSCTCTGTVVRCSRNQLKEIPRGIPAETSELYLESNEIEQIHY 747
Query: 328 ---TYMVSIDRVD-----KVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLR 379
++ S+ R+D +L +Y N + + + + N + L A + LR
Sbjct: 748 ERIRHLRSLTRLDLSNNQITILSNYTFANLTKLS--TLIISYNKLQCLQRHALSGLNNLR 805
Query: 380 RIRLEQNDITELPPKAFANYKRLRRM 405
+ L N I+ LP +F + K L +
Sbjct: 806 VLSLHGNRISMLPEGSFEDLKSLTHI 831
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 154/332 (46%), Gaps = 46/332 (13%)
Query: 3 RTLN--NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCF 60
+TLN +N ++ + G F L L +L ++ N F C+CHL+W WL++ G +C
Sbjct: 610 KTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCG 669
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
APS ++ I D+P EFKCS E G C + CP C C +V C L ++P
Sbjct: 670 APSKVRDVQIKDLPHSEFKCSS--ENSEG-CLGDGYCPPSCTCTGTVVRCSRNQLKEIPR 726
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAV--------------- 165
+P T+EL LE N+I ++ + + + L R+DLS NQI+ ++
Sbjct: 727 GIPAETSELYLESNEIEQIHYERIRHLRSLTRLDLSNNQITILSNYTFANLTKLSTLIIS 786
Query: 166 ---------DAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSW 216
A GL +L L+L+ N ++ LP+G F +L L + + N CDC L W
Sbjct: 787 YNKLQCLQRHALSGLNNLRVLSLHGNRISMLPEGSFEDLKSLTHIALGSNPLYCDCGLKW 846
Query: 217 LHRWLK-RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFH 275
W+K Y G+ +C P +K + IL P F C G R+ I +C+ F
Sbjct: 847 FSDWIKLDYVEPGI-ARCAEPEQMKDKLILSTPSSSFVCRG---RVRNDIL-AKCNACF- 900
Query: 276 PYNSCPVEKP---TGECAAEPSCPHPCRCADG 304
E+P +C A P + C C G
Sbjct: 901 -------EQPCQNQAQCVALPQREYQCLCQPG 925
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 18/133 (13%)
Query: 291 AEPSCPHPCRCADGIVDCREKGLNKVP---------ILLPEATTELTYMVSIDRVDKV-- 339
E CP C C VDC +GL VP + L + Y + R+ K+
Sbjct: 33 TEARCPRVCSCTGLNVDCSHRGLTSVPRKISADVERLELQGNNLTVIYETDLQRLTKLRM 92
Query: 340 ------LLYSYISNNFKRWTNRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELP 392
+++ N+F+ + R RL N + +P + L R+ + N IT +
Sbjct: 93 LQLTDNQIHTIERNSFQDLVSLERLRLNNNRLKAIPENFVTSSASLLRLDISNNVITTVG 152
Query: 393 PKAFANYKRLRRM 405
+ F + LR +
Sbjct: 153 RRVFKGAQSLRSL 165
>gi|195023719|ref|XP_001985737.1| GH20965 [Drosophila grimshawi]
gi|193901737|gb|EDW00604.1| GH20965 [Drosophila grimshawi]
Length = 1524
Score = 310 bits (795), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 178/451 (39%), Positives = 244/451 (54%), Gaps = 77/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNNLT LP F L +LR LR+S+N F CDCHLSWL R+L+ PRL YT+C +PS
Sbjct: 244 TLNNNNLTALPHNAFGGLGKLRALRLSDNPFACDCHLSWLSRYLRSAPRLAPYTRCQSPS 303
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+KGQN+ D+ + EFKCSG E EC E SCPHPCRCADGIVDCREK L VP+ LP
Sbjct: 304 QLKGQNVADLHDQEFKCSGLTEHAPMECGVENSCPHPCRCADGIVDCREKSLTSVPVTLP 363
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TTELRLEQN ITELP K+F++++RLRRIDLS N IS++A DA GLK LT+L L N
Sbjct: 364 DDTTELRLEQNFITELPAKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNK 423
Query: 184 LTYLPDGVF--------------------AELFR-------------------------- 197
+ LP GVF + FR
Sbjct: 424 IKDLPSGVFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAM 483
Query: 198 --LRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDC+L WL +L + P +C +P + + I + E +FKCS
Sbjct: 484 KSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMHRRRIESLREEKFKCS 543
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
E R K+ +GEC + CP C+C VDC +GL +
Sbjct: 544 WD--ELRMKL--------------------SGECRMDSDCPSMCQCEGTTVDCAGRGLKE 581
Query: 316 VPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFAN 374
+P +P TTEL + + R++ L+ + + K L++N +T + P AF
Sbjct: 582 IPRDIPLHTTELLLNDNELGRINSDGLFGRLPHLVK------LELKRNQLTGIEPNAFEG 635
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R++ ++L +N I E+ K F +L+ +
Sbjct: 636 ASRIQDLQLGENKIKEISNKMFLGLHQLKTL 666
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/274 (43%), Positives = 151/274 (55%), Gaps = 54/274 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L + N IT + + F + LR + L NQI+ + AF+GL L LTLNNNNLT LP
Sbjct: 195 LDISHNVITTVGRRVFKGAQSLRSLQLDNNQITCLDEHAFKGLLELEILTLNNNNLTALP 254
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F L +LR LR+S+N F CDCHLSWL R+L+ PRL YT+C +PS +KGQN+ D+
Sbjct: 255 HNAFGGLGKLRALRLSDNPFACDCHLSWLSRYLRSAPRLAPYTRCQSPSQLKGQNVADLH 314
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EFKCSG + E EC E SCPHPCRCADGIVDC
Sbjct: 315 DQEFKCSGLT------------------------EHAPMECGVENSCPHPCRCADGIVDC 350
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
REK L VP+ LP+ TTEL RLEQN ITELP
Sbjct: 351 REKSLTSVPVTLPDDTTEL------------------------------RLEQNFITELP 380
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
K+F++++RLRRI L N+I+ + A + K+L
Sbjct: 381 AKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQL 414
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 119/446 (26%), Positives = 199/446 (44%), Gaps = 76/446 (17%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
+NN+ L +G F + ++T+ +++N FICDC+L WL +L + P +C +P +
Sbjct: 469 DNNIQSLANGTFDAMKSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMH 528
Query: 67 GQNILDIPEHEFKCSGPV--EKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+ I + E +FKCS K +GEC + CP C+C VDC +GL ++P +P
Sbjct: 529 RRRIESLREEKFKCSWDELRMKLSGECRMDSDCPSMCQCEGTTVDCAGRGLKEIPRDIPL 588
Query: 125 ATTEL-------------------------RLEQNDITELPPKAFANYKRLRRIDLSKNQ 159
TTEL L++N +T + P AF R++ + L +N+
Sbjct: 589 HTTELLLNDNELGRINSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASRIQDLQLGENK 648
Query: 160 ISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
I +++ F GL L +L L +N ++ + G F L L +L ++ N F C+CHL+W
Sbjct: 649 IKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAE 708
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
WL++ G +C AP ++ I D+P +EFKCS + E
Sbjct: 709 WLRKKSLNGGAARCAAPLKVRDVQIKDLPHNEFKCSSDNNEG------------------ 750
Query: 280 CPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL------------ 327
C + CP C C +V C L ++P +P T+EL
Sbjct: 751 ---------CLGDGYCPPACTCTGTVVRCSRNQLKEIPRGIPAETSELYLESNEIEQIHY 801
Query: 328 ---TYMVSIDRVD-----KVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLR 379
++ ++ R+D +L +Y N + + + + N + L A + LR
Sbjct: 802 ERIRHLRALTRLDLSNNQITILSNYTFANLTKLS--TLIISYNKLQCLQRHALSGLNNLR 859
Query: 380 RIRLEQNDITELPPKAFANYKRLRRM 405
+ L N I+ LP +F + K L +
Sbjct: 860 VLSLHGNRISMLPEGSFEDLKSLTHI 885
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 136/281 (48%), Gaps = 31/281 (11%)
Query: 3 RTLN--NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCF 60
+TLN +N ++ + G F L L +L ++ N F C+CHL+W WL++ G +C
Sbjct: 664 KTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCA 723
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
AP ++ I D+P +EFKCS + C + CP C C +V C L ++P
Sbjct: 724 APLKVRDVQIKDLPHNEFKCSSDNNEG---CLGDGYCPPACTCTGTVVRCSRNQLKEIPR 780
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAV--------------- 165
+P T+EL LE N+I ++ + + + L R+DLS NQI+ ++
Sbjct: 781 GIPAETSELYLESNEIEQIHYERIRHLRALTRLDLSNNQITILSNYTFANLTKLSTLIIS 840
Query: 166 ---------DAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSW 216
A GL +L L+L+ N ++ LP+G F +L L + + N CDC L W
Sbjct: 841 YNKLQCLQRHALSGLNNLRVLSLHGNRISMLPEGSFEDLKSLTHIALGSNPLYCDCSLKW 900
Query: 217 LHRWLK-RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K Y G+ +C P H+K + IL P F C G
Sbjct: 901 FSDWIKLDYVEPGI-ARCAEPEHMKDKLILSTPSSNFACRG 940
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 55/114 (48%)
Query: 93 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRR 152
E CP C C+ VDC +GL +VP + L L+ N++T + F +LR
Sbjct: 87 TEARCPRVCSCSGLTVDCSHRGLTQVPRKISADVERLDLQGNNLTVIYETDFQRLTKLRM 146
Query: 153 IDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
+ L+ NQI V +A Q L SL L LNNN L +P+ L L IS N
Sbjct: 147 LQLTDNQIHSVEKNALQDLVSLERLRLNNNRLKAIPENFVTSSASLLRLDISHN 200
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 8/116 (6%)
Query: 291 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFK 350
E CP C C+ VDC +GL +VP + L + + ++Y +F+
Sbjct: 87 TEARCPRVCSCSGLTVDCSHRGLTQVPRKISADVERL----DLQGNNLTVIY---ETDFQ 139
Query: 351 RWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R T R +L N I + A + L R+RL N + +P + L R+
Sbjct: 140 RLTKLRMLQLTDNQIHSVEKNALQDLVSLERLRLNNNRLKAIPENFVTSSASLLRL 195
>gi|308153331|gb|ADO14992.1| RT09975p [Drosophila melanogaster]
Length = 1444
Score = 310 bits (795), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 179/451 (39%), Positives = 243/451 (53%), Gaps = 77/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNNLT LP +F L RLR LR+S+N F CDCHLSWL R+L+ RL YT+C +PS
Sbjct: 166 TLNNNNLTSLPHNIFGGLGRLRALRLSDNPFACDCHLSWLSRFLRSATRLAPYTRCQSPS 225
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+KGQN+ D+ + EFKCSG E EC AE SCPHPCRCADGIVDCREK L VP+ LP
Sbjct: 226 QLKGQNVADLHDQEFKCSGLTEHAPMECGAENSCPHPCRCADGIVDCREKSLTSVPVTLP 285
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TTELRLEQN ITELPPK+F++++RLRRIDLS N IS++A DA GLK LT+L L N
Sbjct: 286 DDTTELRLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNK 345
Query: 184 LTYLPDGVF--------------------AELFR-------------------------- 197
+ LP GVF + FR
Sbjct: 346 IKDLPSGVFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAM 405
Query: 198 --LRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDC+L WL +L + P +C +P + + I + E +FKCS
Sbjct: 406 KSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMHRRRIESLREEKFKCS 465
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
E R K+ +GEC + CP C C VDC +GL +
Sbjct: 466 WD--ELRMKL--------------------SGECRMDSDCPAMCHCEGTTVDCTGRGLKE 503
Query: 316 VPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFAN 374
+P +P TTEL + + R+ L+ + + K L++N +T + P AF
Sbjct: 504 IPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVK------LELKRNQLTGIEPNAFEG 557
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ ++L +N I E+ K F +L+ +
Sbjct: 558 ASHIQELQLGENKIKEISNKMFLGLHQLKTL 588
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 135/358 (37%), Positives = 171/358 (47%), Gaps = 102/358 (28%)
Query: 93 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR- 151
E CP C C VDC +GL VP + L L+ N++T + F +LR
Sbjct: 33 TEARCPRVCSCTGLNVDCSHRGLTSVPRKISADVERLELQGNNLTVIYETDFQRLTKLRM 92
Query: 152 -----------------------RIDLSKNQISKVAVDAFQGLKSLTSL----------- 177
R+D+S N I+ V F+G +SL SL
Sbjct: 93 LQLTDNQIHTIERNSFQDLVSLERLDISNNVITTVGRRVFKGAQSLRSLQLDNNQITCLD 152
Query: 178 -------------TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRY 224
TLNNNNLT LP +F L RLR LR+S+N F CDCHLSWL R+L+
Sbjct: 153 EHAFKGLVELEILTLNNNNLTSLPHNIFGGLGRLRALRLSDNPFACDCHLSWLSRFLRSA 212
Query: 225 PRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEK 284
RL YT+C +PS +KGQN+ D+ + EFKCSG + E
Sbjct: 213 TRLAPYTRCQSPSQLKGQNVADLHDQEFKCSGLT------------------------EH 248
Query: 285 PTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSY 344
EC AE SCPHPCRCADGIVDCREK L VP+ LP+ TTEL
Sbjct: 249 APMECGAENSCPHPCRCADGIVDCREKSLTSVPVTLPDDTTEL----------------- 291
Query: 345 ISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
RLEQN ITELPPK+F++++RLRRI L N+I+ + A + K+L
Sbjct: 292 -------------RLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQL 336
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 197/446 (44%), Gaps = 76/446 (17%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
+NN+ L +G F + ++T+ +++N FICDC+L WL +L + P +C +P +
Sbjct: 391 DNNIQSLANGTFDAMKSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMH 450
Query: 67 GQNILDIPEHEFKCSGPV--EKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+ I + E +FKCS K +GEC + CP C C VDC +GL ++P +P
Sbjct: 451 RRRIESLREEKFKCSWDELRMKLSGECRMDSDCPAMCHCEGTTVDCTGRGLKEIPRDIPL 510
Query: 125 ATTEL-------------------------RLEQNDITELPPKAFANYKRLRRIDLSKNQ 159
TTEL L++N +T + P AF ++ + L +N+
Sbjct: 511 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 570
Query: 160 ISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
I +++ F GL L +L L +N ++ + G F L L +L ++ N F C+CHL+W
Sbjct: 571 IKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAE 630
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
WL++ G +C APS ++ I D+P EFKCS + E
Sbjct: 631 WLRKKSLNGGAARCGAPSKVRDVQIKDLPHSEFKCSSENSEG------------------ 672
Query: 280 CPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL------------ 327
C + CP C C +V C L ++P +P T+EL
Sbjct: 673 ---------CLGDGYCPPSCTCTGTVVRCSRNQLKEIPRGIPAETSELYLESNEIEQIHY 723
Query: 328 ---TYMVSIDRVD-----KVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLR 379
++ S+ R+D +L +Y N + + + + N + L A + LR
Sbjct: 724 ERIRHLRSLTRLDLSNNQITILSNYTFANLTKLS--TLIISYNKLQCLQRHALSGLNNLR 781
Query: 380 RIRLEQNDITELPPKAFANYKRLRRM 405
+ L N I+ LP +F + K L +
Sbjct: 782 VLSLHGNRISMLPEGSFEDLKSLTHI 807
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 154/332 (46%), Gaps = 46/332 (13%)
Query: 3 RTLN--NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCF 60
+TLN +N ++ + G F L L +L ++ N F C+CHL+W WL++ G +C
Sbjct: 586 KTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCG 645
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
APS ++ I D+P EFKCS E G C + CP C C +V C L ++P
Sbjct: 646 APSKVRDVQIKDLPHSEFKCSS--ENSEG-CLGDGYCPPSCTCTGTVVRCSRNQLKEIPR 702
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAV--------------- 165
+P T+EL LE N+I ++ + + + L R+DLS NQI+ ++
Sbjct: 703 GIPAETSELYLESNEIEQIHYERIRHLRSLTRLDLSNNQITILSNYTFANLTKLSTLIIS 762
Query: 166 ---------DAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSW 216
A GL +L L+L+ N ++ LP+G F +L L + + N CDC L W
Sbjct: 763 YNKLQCLQRHALSGLNNLRVLSLHGNRISMLPEGSFEDLKSLTHIALGSNPLYCDCGLKW 822
Query: 217 LHRWLK-RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFH 275
W+K Y G+ +C P +K + IL P F C G R+ I +C+ F
Sbjct: 823 FSDWIKLDYVEPGI-ARCAEPEQMKDKLILSTPSSSFVCRG---RVRNDIL-AKCNACF- 876
Query: 276 PYNSCPVEKP---TGECAAEPSCPHPCRCADG 304
E+P +C A P + C C G
Sbjct: 877 -------EQPCQNQAQCVALPQREYQCLCQPG 901
>gi|17136482|ref|NP_476728.1| slit, isoform A [Drosophila melanogaster]
gi|161077130|ref|NP_001097333.1| slit, isoform D [Drosophila melanogaster]
gi|7303029|gb|AAF58098.1| slit, isoform A [Drosophila melanogaster]
gi|157400353|gb|ABV53816.1| slit, isoform D [Drosophila melanogaster]
Length = 1480
Score = 310 bits (795), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 179/451 (39%), Positives = 243/451 (53%), Gaps = 77/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNNLT LP +F L RLR LR+S+N F CDCHLSWL R+L+ RL YT+C +PS
Sbjct: 202 TLNNNNLTSLPHNIFGGLGRLRALRLSDNPFACDCHLSWLSRFLRSATRLAPYTRCQSPS 261
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+KGQN+ D+ + EFKCSG E EC AE SCPHPCRCADGIVDCREK L VP+ LP
Sbjct: 262 QLKGQNVADLHDQEFKCSGLTEHAPMECGAENSCPHPCRCADGIVDCREKSLTSVPVTLP 321
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TTELRLEQN ITELPPK+F++++RLRRIDLS N IS++A DA GLK LT+L L N
Sbjct: 322 DDTTELRLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNK 381
Query: 184 LTYLPDGVF--------------------AELFR-------------------------- 197
+ LP GVF + FR
Sbjct: 382 IKDLPSGVFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAM 441
Query: 198 --LRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDC+L WL +L + P +C +P + + I + E +FKCS
Sbjct: 442 KSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMHRRRIESLREEKFKCS 501
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
E R K+ +GEC + CP C C VDC +GL +
Sbjct: 502 WD--ELRMKL--------------------SGECRMDSDCPAMCHCEGTTVDCTGRGLKE 539
Query: 316 VPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFAN 374
+P +P TTEL + + R+ L+ + + K L++N +T + P AF
Sbjct: 540 IPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVK------LELKRNQLTGIEPNAFEG 593
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ ++L +N I E+ K F +L+ +
Sbjct: 594 ASHIQELQLGENKIKEISNKMFLGLHQLKTL 624
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 135/358 (37%), Positives = 171/358 (47%), Gaps = 102/358 (28%)
Query: 93 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR- 151
E CP C C VDC +GL VP + L L+ N++T + F +LR
Sbjct: 69 TEARCPRVCSCTGLNVDCSHRGLTSVPRKISADVERLELQGNNLTVIYETDFQRLTKLRM 128
Query: 152 -----------------------RIDLSKNQISKVAVDAFQGLKSLTSL----------- 177
R+D+S N I+ V F+G +SL SL
Sbjct: 129 LQLTDNQIHTIERNSFQDLVSLERLDISNNVITTVGRRVFKGAQSLRSLQLDNNQITCLD 188
Query: 178 -------------TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRY 224
TLNNNNLT LP +F L RLR LR+S+N F CDCHLSWL R+L+
Sbjct: 189 EHAFKGLVELEILTLNNNNLTSLPHNIFGGLGRLRALRLSDNPFACDCHLSWLSRFLRSA 248
Query: 225 PRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEK 284
RL YT+C +PS +KGQN+ D+ + EFKCSG + E
Sbjct: 249 TRLAPYTRCQSPSQLKGQNVADLHDQEFKCSGLT------------------------EH 284
Query: 285 PTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSY 344
EC AE SCPHPCRCADGIVDCREK L VP+ LP+ TTEL
Sbjct: 285 APMECGAENSCPHPCRCADGIVDCREKSLTSVPVTLPDDTTEL----------------- 327
Query: 345 ISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
RLEQN ITELPPK+F++++RLRRI L N+I+ + A + K+L
Sbjct: 328 -------------RLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQL 372
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 197/446 (44%), Gaps = 76/446 (17%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
+NN+ L +G F + ++T+ +++N FICDC+L WL +L + P +C +P +
Sbjct: 427 DNNIQSLANGTFDAMKSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMH 486
Query: 67 GQNILDIPEHEFKCSGPV--EKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+ I + E +FKCS K +GEC + CP C C VDC +GL ++P +P
Sbjct: 487 RRRIESLREEKFKCSWDELRMKLSGECRMDSDCPAMCHCEGTTVDCTGRGLKEIPRDIPL 546
Query: 125 ATTEL-------------------------RLEQNDITELPPKAFANYKRLRRIDLSKNQ 159
TTEL L++N +T + P AF ++ + L +N+
Sbjct: 547 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 606
Query: 160 ISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
I +++ F GL L +L L +N ++ + G F L L +L ++ N F C+CHL+W
Sbjct: 607 IKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAE 666
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
WL++ G +C APS ++ I D+P EFKCS + E
Sbjct: 667 WLRKKSLNGGAARCGAPSKVRDVQIKDLPHSEFKCSSENSEG------------------ 708
Query: 280 CPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL------------ 327
C + CP C C +V C L ++P +P T+EL
Sbjct: 709 ---------CLGDGYCPPSCTCTGTVVRCSRNQLKEIPRGIPAETSELYLESNEIEQIHY 759
Query: 328 ---TYMVSIDRVD-----KVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLR 379
++ S+ R+D +L +Y N + + + + N + L A + LR
Sbjct: 760 ERIRHLRSLTRLDLSNNQITILSNYTFANLTKLS--TLIISYNKLQCLQRHALSGLNNLR 817
Query: 380 RIRLEQNDITELPPKAFANYKRLRRM 405
+ L N I+ LP +F + K L +
Sbjct: 818 VLSLHGNRISMLPEGSFEDLKSLTHI 843
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 154/332 (46%), Gaps = 46/332 (13%)
Query: 3 RTLN--NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCF 60
+TLN +N ++ + G F L L +L ++ N F C+CHL+W WL++ G +C
Sbjct: 622 KTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCG 681
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
APS ++ I D+P EFKCS E G C + CP C C +V C L ++P
Sbjct: 682 APSKVRDVQIKDLPHSEFKCSS--ENSEG-CLGDGYCPPSCTCTGTVVRCSRNQLKEIPR 738
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAV--------------- 165
+P T+EL LE N+I ++ + + + L R+DLS NQI+ ++
Sbjct: 739 GIPAETSELYLESNEIEQIHYERIRHLRSLTRLDLSNNQITILSNYTFANLTKLSTLIIS 798
Query: 166 ---------DAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSW 216
A GL +L L+L+ N ++ LP+G F +L L + + N CDC L W
Sbjct: 799 YNKLQCLQRHALSGLNNLRVLSLHGNRISMLPEGSFEDLKSLTHIALGSNPLYCDCGLKW 858
Query: 217 LHRWLK-RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFH 275
W+K Y G+ +C P +K + IL P F C G R+ I +C+ F
Sbjct: 859 FSDWIKLDYVEPGI-ARCAEPEQMKDKLILSTPSSSFVCRG---RVRNDIL-AKCNACF- 912
Query: 276 PYNSCPVEKP---TGECAAEPSCPHPCRCADG 304
E+P +C A P + C C G
Sbjct: 913 -------EQPCQNQAQCVALPQREYQCLCQPG 937
>gi|270002729|gb|EEZ99176.1| slit [Tribolium castaneum]
Length = 1394
Score = 310 bits (795), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 185/452 (40%), Positives = 246/452 (54%), Gaps = 77/452 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNNLT++ +F+ +FRLRTLR+S+N CDC LSWL R+L+ PRL YT+C +P+
Sbjct: 131 TLNNNNLTWIGKDMFSNMFRLRTLRLSDNLLHCDCQLSWLARYLRHSPRLAQYTRCHSPN 190
Query: 64 HIKGQNILDIPEHEFKCSGPVEKP-TGECAAEPSCPHPCRCADGIVDCREKGLNKVPILL 122
H+KGQNI D+ + EFKCSG E+ GEC +EP CPHPCRCADGIVDCREKGL KVP L
Sbjct: 191 HLKGQNIADLQDQEFKCSGLAERAINGECISEPECPHPCRCADGIVDCREKGLTKVPDHL 250
Query: 123 PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLK---------- 172
PE TTELRLEQN+I E+P KAFA +KRLRRIDLS N+ISK+A DAFQGLK
Sbjct: 251 PEGTTELRLEQNEIVEIPTKAFAAHKRLRRIDLSNNKISKIASDAFQGLKALTSLVLYGN 310
Query: 173 --------------SLTSLTLN------------------------NNNLTYLPDGVFAE 194
SL L LN +NN+ L +G F
Sbjct: 311 KIKDLPAGVFQGLVSLQLLLLNANEITCIRKDTFSDLHSLSLLSLYDNNIQSLANGSFDS 370
Query: 195 LFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
L ++TL ++ N FICDC+L WL +L R P +C P ++ + I + + +FKC
Sbjct: 371 LRSIQTLHLARNPFICDCNLKWLAEYLHRNPIETSGARCDTPKRMQRRRIEALKDEKFKC 430
Query: 255 SGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLN 314
G +EE T F GEC + +CP C C +VDC KGL
Sbjct: 431 KG----------QEEFRTRF-----------AGECLIDNACPSGCTCDGTVVDCSGKGLK 469
Query: 315 KVPILLPEATTE-LTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFA 373
++P +P TTE L + + R+ L+ + N + L +N IT + +F
Sbjct: 470 EIPRDIPVYTTELLLHDNELGRIKSDGLFGRLPNLIR------LDLRRNQITGIEENSFE 523
Query: 374 NYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R+ + L +N + E+ K F L+ +
Sbjct: 524 GASRIYELLLSENKLLEIHNKMFLGLHNLKVL 555
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 117/277 (42%), Positives = 152/277 (54%), Gaps = 53/277 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L + N I+ + K ++ + L N+I+ + A + K L LTLNNNNLT++
Sbjct: 82 LDISHNLISVIGRKTLRGITAIKNLQLDNNRITCIDDQALRSFKDLEILTLNNNNLTWIG 141
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
+F+ +FRLRTLR+S+N CDC LSWL R+L+ PRL YT+C +P+H+KGQNI D+
Sbjct: 142 KDMFSNMFRLRTLRLSDNLLHCDCQLSWLARYLRHSPRLAQYTRCHSPNHLKGQNIADLQ 201
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EFKCSG + + GEC +EP CPHPCRCADGIVDC
Sbjct: 202 DQEFKCSGLAERAIN-----------------------GECISEPECPHPCRCADGIVDC 238
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
REKGL KVP LPE TTEL RLEQN+I E+P
Sbjct: 239 REKGLTKVPDHLPEGTTEL------------------------------RLEQNEIVEIP 268
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
KAFA +KRLRRI L N I+++ AF K L +
Sbjct: 269 TKAFAAHKRLRRIDLSNNKISKIASDAFQGLKALTSL 305
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/445 (28%), Positives = 200/445 (44%), Gaps = 73/445 (16%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
+NN+ L +G F L ++TL ++ N FICDC+L WL +L R P +C P ++
Sbjct: 357 DNNIQSLANGSFDSLRSIQTLHLARNPFICDCNLKWLAEYLHRNPIETSGARCDTPKRMQ 416
Query: 67 GQNILDIPEHEFKCSGPVEKPT---GECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+ I + + +FKC G E T GEC + +CP C C +VDC KGL ++P +P
Sbjct: 417 RRRIEALKDEKFKCKGQEEFRTRFAGECLIDNACPSGCTCDGTVVDCSGKGLKEIPRDIP 476
Query: 124 EATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG------------ 170
TTEL L N++ + F L R+DL +NQI+ + ++F+G
Sbjct: 477 VYTTELLLHDNELGRIKSDGLFGRLPNLIRLDLRRNQITGIEENSFEGASRIYELLLSEN 536
Query: 171 ------------LKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLH 218
L +L L+LNNN +T + G F L L TL + +N F+C+CHL+W
Sbjct: 537 KLLEIHNKMFLGLHNLKVLSLNNNQITCVMPGSFDHLTSLHTLNLMQNPFMCNCHLAWFS 596
Query: 219 RWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYN 278
WLK G KC P+ +K I ++P++EFKC+ + +
Sbjct: 597 DWLKSKGLSGSPPKCAGPTRVKDVLIRELPKNEFKCTSDNDQG----------------- 639
Query: 279 SCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL----------- 327
C E CP C C +V C L ++P +P T+EL
Sbjct: 640 ----------CLGENYCPPKCSCTGTVVRCSRAKLTEIPRGIPPETSELYLDINEITTIQ 689
Query: 328 ----TYMVSIDRVD-KVLLYSYISNN-FKRWTNRSRR-LEQNDITELPPKAFANYKRLRR 380
+++ S+ R+D +SNN F + S + N + + A K LR
Sbjct: 690 ADRISHLKSLTRLDLSSNQIGMLSNNTFANLSKLSTLIISYNKLQCVQRNALTGLKSLRI 749
Query: 381 IRLEQNDITELPPKAFANYKRLRRM 405
+ L N I+ +P F+N K + +
Sbjct: 750 LSLHGNQISMIPEGTFSNLKSISHI 774
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 162/327 (49%), Gaps = 40/327 (12%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+LNNN +T + G F L L TL + +N F+C+CHL+W WLK G KC P+
Sbjct: 556 SLNNNQITCVMPGSFDHLTSLHTLNLMQNPFMCNCHLAWFSDWLKSKGLSGSPPKCAGPT 615
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I ++P++EFKC+ ++ C E CP C C +V C L ++P +P
Sbjct: 616 RVKDVLIRELPKNEFKCTSDNDQG---CLGENYCPPKCSCTGTVVRCSRAKLTEIPRGIP 672
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
T+EL L+ N+IT + ++ K L R+DLS NQI ++ + F
Sbjct: 673 PETSELYLDINEITTIQADRISHLKSLTRLDLSSNQIGMLSNNTFANLSKLSTLIISYNK 732
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N ++ +P+G F+ L + + + N CDC L WL
Sbjct: 733 LQCVQRNALTGLKSLRILSLHGNQISMIPEGTFSNLKSISHIALGSNPLYCDCSLRWLSD 792
Query: 220 WLK-RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGS-SMETRSKIYREECSTDFHPY 277
W+K Y G+ C P+++K ++IL P F+C G S E +K C F
Sbjct: 793 WVKVDYVEPGI-AHCAEPANMKDKSILSTPSTAFQCKGKVSNEILAK-----CDACF--- 843
Query: 278 NSCPVEKPTGECAAEPSCPHPCRCADG 304
+ P K G+CA +P + C+CA G
Sbjct: 844 -TFPC-KNGGKCATQPERDYECKCAPG 868
>gi|194882717|ref|XP_001975457.1| GG22325 [Drosophila erecta]
gi|190658644|gb|EDV55857.1| GG22325 [Drosophila erecta]
Length = 1504
Score = 310 bits (794), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 179/451 (39%), Positives = 243/451 (53%), Gaps = 77/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNNLT LP +F L RLR LR+S+N F CDCHLSWL R+L+ RL YT+C +PS
Sbjct: 226 TLNNNNLTSLPHNIFGGLGRLRALRLSDNPFACDCHLSWLSRFLRSATRLAPYTRCQSPS 285
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+KGQN+ D+ + EFKCSG E EC AE SCPHPCRCADGIVDCREK L VP+ LP
Sbjct: 286 QLKGQNVADLHDQEFKCSGLTEHAPMECGAENSCPHPCRCADGIVDCREKSLTSVPVTLP 345
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TTELRLEQN ITELPPK+F++++RLRRIDLS N IS++A DA GLK LT+L L N
Sbjct: 346 DDTTELRLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNK 405
Query: 184 LTYLPDGVF--------------------AELFR-------------------------- 197
+ LP GVF + FR
Sbjct: 406 IKDLPSGVFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAM 465
Query: 198 --LRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDC+L WL +L + P +C +P + + I + E +FKCS
Sbjct: 466 KSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMHRRRIESLREEKFKCS 525
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
E R K+ +GEC + CP C C VDC +GL +
Sbjct: 526 WD--ELRMKL--------------------SGECRMDSDCPAMCHCEGTTVDCTGRGLKE 563
Query: 316 VPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFAN 374
+P +P TTEL + + R+ L+ + + K L++N +T + P AF
Sbjct: 564 IPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVK------LELKRNQLTGIEPNAFEG 617
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ ++L +N I E+ K F +L+ +
Sbjct: 618 ASHIQELQLGENKIKEISNKMFLGLHQLKTL 648
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/284 (43%), Positives = 159/284 (55%), Gaps = 56/284 (19%)
Query: 121 LLPEATTELRLE--QNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLT 178
L+ + + LRL+ N IT + + F + LR + L NQI+ + AF+GL L LT
Sbjct: 167 LVTSSASLLRLDISNNVITTVGRRVFKGAQSLRSLQLDNNQITCLDEHAFKGLVELEILT 226
Query: 179 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 238
LNNNNLT LP +F L RLR LR+S+N F CDCHLSWL R+L+ RL YT+C +PS
Sbjct: 227 LNNNNLTSLPHNIFGGLGRLRALRLSDNPFACDCHLSWLSRFLRSATRLAPYTRCQSPSQ 286
Query: 239 IKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHP 298
+KGQN+ D+ + EFKCSG + E EC AE SCPHP
Sbjct: 287 LKGQNVADLHDQEFKCSGLT------------------------EHAPMECGAENSCPHP 322
Query: 299 CRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRR 358
CRCADGIVDCREK L VP+ LP+ TTEL R
Sbjct: 323 CRCADGIVDCREKSLTSVPVTLPDDTTEL------------------------------R 352
Query: 359 LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
LEQN ITELPPK+F++++RLRRI L N+I+ + A + K+L
Sbjct: 353 LEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQL 396
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 197/446 (44%), Gaps = 76/446 (17%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
+NN+ L +G F + ++T+ +++N FICDC+L WL +L + P +C +P +
Sbjct: 451 DNNIQSLANGTFDAMKSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMH 510
Query: 67 GQNILDIPEHEFKCSGPV--EKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+ I + E +FKCS K +GEC + CP C C VDC +GL ++P +P
Sbjct: 511 RRRIESLREEKFKCSWDELRMKLSGECRMDSDCPAMCHCEGTTVDCTGRGLKEIPRDIPL 570
Query: 125 ATTEL-------------------------RLEQNDITELPPKAFANYKRLRRIDLSKNQ 159
TTEL L++N +T + P AF ++ + L +N+
Sbjct: 571 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 630
Query: 160 ISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
I +++ F GL L +L L +N ++ + G F L L +L ++ N F C+CHL+W
Sbjct: 631 IKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAE 690
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
WL++ G +C APS ++ I D+P EFKCS + E
Sbjct: 691 WLRKKSLNGGAARCGAPSKVRDVQIKDLPHSEFKCSSENSEG------------------ 732
Query: 280 CPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL------------ 327
C + CP C C +V C L ++P +P T+EL
Sbjct: 733 ---------CLGDGYCPPSCTCTGTVVRCSRNQLKEIPRGIPAETSELYLESNEIEQIHY 783
Query: 328 ---TYMVSIDRVD-----KVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLR 379
++ S+ R+D +L +Y N + + + + N + L A + LR
Sbjct: 784 ERIRHLRSLTRLDLSNNQITILSNYTFANLTKLS--TLIISYNKLQCLQRHALSGLNNLR 841
Query: 380 RIRLEQNDITELPPKAFANYKRLRRM 405
+ L N I+ LP +F + K L +
Sbjct: 842 VLSLHGNRISMLPEGSFEDLKSLTHI 867
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 154/332 (46%), Gaps = 46/332 (13%)
Query: 3 RTLN--NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCF 60
+TLN +N ++ + G F L L +L ++ N F C+CHL+W WL++ G +C
Sbjct: 646 KTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCG 705
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
APS ++ I D+P EFKCS E G C + CP C C +V C L ++P
Sbjct: 706 APSKVRDVQIKDLPHSEFKCSS--ENSEG-CLGDGYCPPSCTCTGTVVRCSRNQLKEIPR 762
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAV--------------- 165
+P T+EL LE N+I ++ + + + L R+DLS NQI+ ++
Sbjct: 763 GIPAETSELYLESNEIEQIHYERIRHLRSLTRLDLSNNQITILSNYTFANLTKLSTLIIS 822
Query: 166 ---------DAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSW 216
A GL +L L+L+ N ++ LP+G F +L L + + N CDC L W
Sbjct: 823 YNKLQCLQRHALSGLNNLRVLSLHGNRISMLPEGSFEDLKSLTHIALGSNPLYCDCGLKW 882
Query: 217 LHRWLK-RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFH 275
W+K Y G+ +C P +K + IL P F C G R+ I +C+ F
Sbjct: 883 FSDWIKLDYVEPGI-ARCAEPEQMKDKLILSTPSSSFVCRG---RVRNDIL-AKCNACF- 936
Query: 276 PYNSCPVEKP---TGECAAEPSCPHPCRCADG 304
E+P +C A P + C C G
Sbjct: 937 -------EQPCQNQAQCVALPQREYQCLCQPG 961
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 55/114 (48%)
Query: 93 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRR 152
E CP C C VDC +GL VP + L L+ N++T + F +LR
Sbjct: 69 TEARCPRVCSCTGLNVDCSHRGLTSVPRKISADVERLELQGNNLTVIYETDFQRLTKLRM 128
Query: 153 IDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
+ L+ NQI + ++FQ L SL L LNNN L +P+ + L L IS N
Sbjct: 129 LQLTDNQIHTIERNSFQDLVSLERLRLNNNRLKAIPENLVTSSASLLRLDISNN 182
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 8/116 (6%)
Query: 291 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFK 350
E CP C C VDC +GL VP + L + + ++Y +F+
Sbjct: 69 TEARCPRVCSCTGLNVDCSHRGLTSVPRKISADVERL----ELQGNNLTVIY---ETDFQ 121
Query: 351 RWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R T R +L N I + +F + L R+RL N + +P + L R+
Sbjct: 122 RLTKLRMLQLTDNQIHTIERNSFQDLVSLERLRLNNNRLKAIPENLVTSSASLLRL 177
>gi|195380816|ref|XP_002049157.1| GJ20903 [Drosophila virilis]
gi|194143954|gb|EDW60350.1| GJ20903 [Drosophila virilis]
Length = 1518
Score = 310 bits (794), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 178/451 (39%), Positives = 244/451 (54%), Gaps = 77/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNNLT LP F L +LR LR+S+N F CDCHLSWL R+L+ PRL YT+C +PS
Sbjct: 238 TLNNNNLTALPHNAFGGLGKLRALRLSDNPFACDCHLSWLSRYLRSAPRLAPYTRCQSPS 297
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+KGQN+ D+ + EFKCSG E EC E SCPHPCRCADGIVDCREK L VP+ LP
Sbjct: 298 QLKGQNVADLHDQEFKCSGLTEHAPMECGVENSCPHPCRCADGIVDCREKSLTSVPVTLP 357
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TTELRLEQN ITELP K+F++++RLRRIDLS N IS++A DA GLK LT+L L N
Sbjct: 358 DDTTELRLEQNFITELPAKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNK 417
Query: 184 LTYLPDGVF--------------------AELFR-------------------------- 197
+ LP GVF + FR
Sbjct: 418 IKDLPSGVFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAM 477
Query: 198 --LRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDC+L WL +L + P +C +P + + I + E +FKCS
Sbjct: 478 KSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMHRRRIESLREEKFKCS 537
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
E R K+ +GEC + CP C+C VDC +GL +
Sbjct: 538 WD--ELRMKL--------------------SGECRMDSDCPAMCQCEGTTVDCAGRGLKE 575
Query: 316 VPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFAN 374
+P +P TTEL + + R++ L+ + + K L++N +T + P AF
Sbjct: 576 IPRDIPLHTTELLLNDNELGRINSDGLFGRLPHLVK------LELKRNQLTGIEPNAFEG 629
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R++ ++L +N I E+ K F +L+ +
Sbjct: 630 ASRIQDLQLGENKIKEISNKMFLGLHQLKSL 660
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/274 (43%), Positives = 151/274 (55%), Gaps = 54/274 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L + N IT + + F + LR + L NQI+ + AF+GL L LTLNNNNLT LP
Sbjct: 189 LDISHNVITTVGRRVFKGAQSLRSLQLDNNQITCMDEHAFKGLLELEILTLNNNNLTALP 248
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F L +LR LR+S+N F CDCHLSWL R+L+ PRL YT+C +PS +KGQN+ D+
Sbjct: 249 HNAFGGLGKLRALRLSDNPFACDCHLSWLSRYLRSAPRLAPYTRCQSPSQLKGQNVADLH 308
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EFKCSG + E EC E SCPHPCRCADGIVDC
Sbjct: 309 DQEFKCSGLT------------------------EHAPMECGVENSCPHPCRCADGIVDC 344
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
REK L VP+ LP+ TTEL RLEQN ITELP
Sbjct: 345 REKSLTSVPVTLPDDTTEL------------------------------RLEQNFITELP 374
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
K+F++++RLRRI L N+I+ + A + K+L
Sbjct: 375 AKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQL 408
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 200/446 (44%), Gaps = 76/446 (17%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
+NN+ L +G F + ++T+ +++N FICDC+L WL +L + P +C +P +
Sbjct: 463 DNNIQSLANGTFDAMKSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMH 522
Query: 67 GQNILDIPEHEFKCSGPV--EKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+ I + E +FKCS K +GEC + CP C+C VDC +GL ++P +P
Sbjct: 523 RRRIESLREEKFKCSWDELRMKLSGECRMDSDCPAMCQCEGTTVDCAGRGLKEIPRDIPL 582
Query: 125 ATTEL-------------------------RLEQNDITELPPKAFANYKRLRRIDLSKNQ 159
TTEL L++N +T + P AF R++ + L +N+
Sbjct: 583 HTTELLLNDNELGRINSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASRIQDLQLGENK 642
Query: 160 ISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
I +++ F GL L SL L +N ++ + G F L L +L ++ N F C+CHL+W
Sbjct: 643 IKEISNKMFLGLHQLKSLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAE 702
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
WL++ G +C AP+ ++ I D+P +EFKCS + E
Sbjct: 703 WLRKKSLNGGAARCAAPAKVRDVQIKDLPHNEFKCSSENNEG------------------ 744
Query: 280 CPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL------------ 327
C + CP C C +V C L ++P +P T+EL
Sbjct: 745 ---------CLGDGYCPPACTCTGTVVRCSRNQLKEIPRGIPAETSELYLESNEIEQIHY 795
Query: 328 ---TYMVSIDRVD-----KVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLR 379
++ ++ R+D +L +Y N + + + + N + L A + LR
Sbjct: 796 ERIRHLRALTRLDLSNNQITILSNYTFANLTKLS--TLIISYNRLQCLQRHALSGLNNLR 853
Query: 380 RIRLEQNDITELPPKAFANYKRLRRM 405
+ L N I+ LP +F + K L +
Sbjct: 854 VLSLHGNRISMLPEGSFEDLKSLTHI 879
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 154/328 (46%), Gaps = 44/328 (13%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L +N ++ + G F L L +L ++ N F C+CHL+W WL++ G +C AP+
Sbjct: 662 LYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCAAPAK 721
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
++ I D+P +EFKCS E G C + CP C C +V C L ++P +P
Sbjct: 722 VRDVQIKDLPHNEFKCSS--ENNEG-CLGDGYCPPACTCTGTVVRCSRNQLKEIPRGIPA 778
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAV------------------- 165
T+EL LE N+I ++ + + + L R+DLS NQI+ ++
Sbjct: 779 ETSELYLESNEIEQIHYERIRHLRALTRLDLSNNQITILSNYTFANLTKLSTLIISYNRL 838
Query: 166 -----DAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW 220
A GL +L L+L+ N ++ LP+G F +L L + + N CDC L W W
Sbjct: 839 QCLQRHALSGLNNLRVLSLHGNRISMLPEGSFEDLKSLTHIALGSNPLYCDCSLKWFSDW 898
Query: 221 LK-RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
+K Y G+ +C P H+K + IL P F C G + R++I N+
Sbjct: 899 IKLDYVEPGI-ARCAEPEHMKDKLILSTPSSNFACRG---KVRNEI--------LAKCNA 946
Query: 280 CPVEKP---TGECAAEPSCPHPCRCADG 304
C E+P +C A P + C C G
Sbjct: 947 C-YEQPCQNKAQCLALPQRDYQCLCQPG 973
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 55/114 (48%)
Query: 93 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRR 152
E CP C C+ VDC +GL +VP + L L+ N++T + F +LR
Sbjct: 81 TEARCPRVCSCSGLTVDCSHRGLTQVPRKISADVERLDLQGNNLTVIYETDFQRLTKLRM 140
Query: 153 IDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
+ L+ NQI V +A Q L SL L LNNN L +P+ L L IS N
Sbjct: 141 LQLTDNQIHTVEKNALQDLVSLERLRLNNNRLKAIPENFVTSSASLLRLDISHN 194
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 53/119 (44%), Gaps = 17/119 (14%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTKCFAP 62
+L+ N ++ LP+G F +L L + + N CDC L W W+K Y G+ +C P
Sbjct: 856 SLHGNRISMLPEGSFEDLKSLTHIALGSNPLYCDCSLKWFSDWIKLDYVEPGI-ARCAEP 914
Query: 63 SHIKGQNILDIPEHEFKCSGPV------------EKP---TGECAAEPSCPHPCRCADG 106
H+K + IL P F C G V E+P +C A P + C C G
Sbjct: 915 EHMKDKLILSTPSSNFACRGKVRNEILAKCNACYEQPCQNKAQCLALPQRDYQCLCQPG 973
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 8/116 (6%)
Query: 291 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFK 350
E CP C C+ VDC +GL +VP + L + + ++Y +F+
Sbjct: 81 TEARCPRVCSCSGLTVDCSHRGLTQVPRKISADVERL----DLQGNNLTVIY---ETDFQ 133
Query: 351 RWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R T R +L N I + A + L R+RL N + +P + L R+
Sbjct: 134 RLTKLRMLQLTDNQIHTVEKNALQDLVSLERLRLNNNRLKAIPENFVTSSASLLRL 189
>gi|157120931|ref|XP_001659800.1| slit protein [Aedes aegypti]
gi|108874764|gb|EAT38989.1| AAEL009175-PA, partial [Aedes aegypti]
Length = 1393
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 183/451 (40%), Positives = 240/451 (53%), Gaps = 77/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T LP +F+ + RLR LR+SEN F CDCHLSWL R+LK PRL YT+C +PS
Sbjct: 121 TLNNNNITALPRDMFSGMPRLRALRLSENPFACDCHLSWLARYLKNAPRLAPYTRCHSPS 180
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+KGQN+ D+ E EFKCSG E EC CPHPCRCADGIVDCREK L VP LP
Sbjct: 181 QLKGQNVADLHEQEFKCSGLTENAPMECGGRSLCPHPCRCADGIVDCREKSLTSVPSTLP 240
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLT-------- 175
E TTELRLEQN ITE+PPKAFAN++RL+RIDLS N IS+VA DAF GLKSLT
Sbjct: 241 EDTTELRLEQNYITEIPPKAFANHRRLKRIDLSNNNISRVAYDAFSGLKSLTSLVLYGNK 300
Query: 176 ----------------S------------------------LTLNNNNLTYLPDGVFAEL 195
L+L +NN+ L +G F L
Sbjct: 301 IKDLPASVFKGLTSLQLLLLNANEITCVRRDAFKDLQNLSLLSLYDNNIQTLANGTFDSL 360
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL ++ N FICDC+L WL +L + P +C +P ++ + I + + +FKC+
Sbjct: 361 KSIQTLHLARNPFICDCNLRWLGDYLHQNPIETSGARCDSPKRMQRRRIEALKDEKFKCT 420
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
E SKI K GEC + CP C C VDC +GL +
Sbjct: 421 ----EDHSKI------------------KYAGECRMDQECPAACHCDRTTVDCSARGLKE 458
Query: 316 VPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFAN 374
+P +P TTEL + + RV L+ + N K L +N I + P AF
Sbjct: 459 IPRDIPLYTTELILNDNELTRVRSDGLFGRLPNLVK------LDLRRNQIANIEPNAFEG 512
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+++ + + +N I E+ K F +L+ +
Sbjct: 513 ATKIQELFMSENKIAEVHNKMFLGLHQLKTL 543
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 126/287 (43%), Positives = 156/287 (54%), Gaps = 56/287 (19%)
Query: 121 LLPEATTELRLE--QNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLT 178
L A LRL+ N ++ +P +AF LR + L NQI+ + A +GL L LT
Sbjct: 62 FLSSAANLLRLDLSHNALSAIPKRAFKGATSLRSLQLDNNQITCLDEHAIKGLAELEILT 121
Query: 179 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 238
LNNNN+T LP +F+ + RLR LR+SEN F CDCHLSWL R+LK PRL YT+C +PS
Sbjct: 122 LNNNNITALPRDMFSGMPRLRALRLSENPFACDCHLSWLARYLKNAPRLAPYTRCHSPSQ 181
Query: 239 IKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHP 298
+KGQN+ D+ E EFKCSG + E EC CPHP
Sbjct: 182 LKGQNVADLHEQEFKCSGLT------------------------ENAPMECGGRSLCPHP 217
Query: 299 CRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRR 358
CRCADGIVDCREK L VP LPE TTEL R
Sbjct: 218 CRCADGIVDCREKSLTSVPSTLPEDTTEL------------------------------R 247
Query: 359 LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
LEQN ITE+PPKAFAN++RL+RI L N+I+ + AF+ K L +
Sbjct: 248 LEQNYITEIPPKAFANHRRLKRIDLSNNNISRVAYDAFSGLKSLTSL 294
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 123/447 (27%), Positives = 201/447 (44%), Gaps = 72/447 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +NN+ L +G F L ++TL ++ N FICDC+L WL +L + P +C +P
Sbjct: 343 SLYDNNIQTLANGTFDSLKSIQTLHLARNPFICDCNLRWLGDYLHQNPIETSGARCDSPK 402
Query: 64 HIKGQNILDIPEHEFKCSGPVEKP--TGECAAEPSCPHPCRCADGIVDCREKGLNKVPIL 121
++ + I + + +FKC+ K GEC + CP C C VDC +GL ++P
Sbjct: 403 RMQRRRIEALKDEKFKCTEDHSKIKYAGECRMDQECPAACHCDRTTVDCSARGLKEIPRD 462
Query: 122 LPEATTELRLEQNDIT-------------------------ELPPKAFANYKRLRRIDLS 156
+P TTEL L N++T + P AF +++ + +S
Sbjct: 463 IPLYTTELILNDNELTRVRSDGLFGRLPNLVKLDLRRNQIANIEPNAFEGATKIQELFMS 522
Query: 157 KNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSW 216
+N+I++V F GL L +L+L +N ++ + G F L L L ++ N F C+CHL W
Sbjct: 523 ENKIAEVHNKMFLGLHQLKTLSLYDNLISCVMPGSFDFLSSLTQLNLASNPFRCNCHLGW 582
Query: 217 LHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHP 276
WL++ G +C +P+ ++ + D+P EFKC+ + +
Sbjct: 583 FSDWLRKKQLGGPPARCASPAKVRDVPVKDLPHFEFKCTSEADQG--------------- 627
Query: 277 YNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL------TYM 330
C E CP C C +V C L ++P +P TTEL M
Sbjct: 628 ------------CLGEGYCPPSCTCTGTVVRCSRNKLKEIPKSIPSETTELYLESNDISM 675
Query: 331 VSIDRVD--KVLLYSYISNN------FKRWTNRSRR----LEQNDITELPPKAFANYKRL 378
V DR+ K L +SNN + N SR + N++ + A A K+L
Sbjct: 676 VHTDRISHLKSLTRLDLSNNKIGILSNHTFANLSRLSTLIISYNNLQCIQQYALAGLKQL 735
Query: 379 RRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L N I+ +P FA+ + + +
Sbjct: 736 KVLSLHGNHISMIPDGTFADLQSITHI 762
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/319 (31%), Positives = 152/319 (47%), Gaps = 34/319 (10%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N ++ + G F L L L ++ N F C+CHL W WL++ G +C +P+
Sbjct: 544 SLYDNLISCVMPGSFDFLSSLTQLNLASNPFRCNCHLGWFSDWLRKKQLGGPPARCASPA 603
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+P EFKC+ ++ C E CP C C +V C L ++P +P
Sbjct: 604 KVRDVPVKDLPHFEFKCTSEADQG---CLGEGYCPPSCTCTGTVVRCSRNKLKEIPKSIP 660
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TTEL LE NDI+ + ++ K L R+DLS N+I ++ F
Sbjct: 661 SETTELYLESNDISMVHTDRISHLKSLTRLDLSNNKIGILSNHTFANLSRLSTLIISYNN 720
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLK L L+L+ N+++ +PDG FA+L + + + N CDC L WL
Sbjct: 721 LQCIQQYALAGLKQLKVLSLHGNHISMIPDGTFADLQSITHIALGSNPLYCDCSLKWLSE 780
Query: 220 WLKR-YPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGS-SMETRSKIYREECSTDFHPY 277
W+KR Y G+ +C P +K + IL P +F C G S E SK + C T P
Sbjct: 781 WVKRDYVEPGI-ARCAEPELMKDKLILSTPASQFLCKGKVSNEILSKC--DACYT--FPC 835
Query: 278 NSCPVEKPTGECAAEPSCP 296
+ V KP E E CP
Sbjct: 836 KNNAVCKPLPERQYECQCP 854
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%)
Query: 131 LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDG 190
L+ N+IT + F + +LR + L+ NQI + DA L SL L LN+N L +PD
Sbjct: 2 LQGNNITVIYESDFQSLSKLRILQLTDNQIYTIEKDALIDLISLERLRLNSNRLKSIPDN 61
Query: 191 VFAELFRLRTLRISENSF 208
+ L L +S N+
Sbjct: 62 FLSSAANLLRLDLSHNAL 79
>gi|194756234|ref|XP_001960384.1| GF13339 [Drosophila ananassae]
gi|190621682|gb|EDV37206.1| GF13339 [Drosophila ananassae]
Length = 1502
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 177/451 (39%), Positives = 242/451 (53%), Gaps = 77/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNNLT LP +F L RLR LR+S+N F CDCHLSWL R+L+ RL YT+C +PS
Sbjct: 223 TLNNNNLTALPHNIFGSLGRLRALRLSDNPFACDCHLSWLSRFLRSATRLAPYTRCQSPS 282
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+KGQN+ D+ + EFKCSG E EC E SCPHPCRCADGIVDCREK L VP+ LP
Sbjct: 283 QLKGQNVADLHDQEFKCSGLTEHAPMECGVENSCPHPCRCADGIVDCREKSLTSVPVTLP 342
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TTELRLEQN ITELPPK+F++++RLRRIDLS N IS++A DA GLK LT+L L N
Sbjct: 343 DDTTELRLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNK 402
Query: 184 LTYLPDGVF--------------------AELFR-------------------------- 197
+ LP GVF + FR
Sbjct: 403 IKDLPSGVFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAM 462
Query: 198 --LRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDC+L WL +L + P +C +P + + I + E +FKCS
Sbjct: 463 KSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMHRRRIESLREEKFKCS 522
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
E R K+ +GEC + CP C C VDC +GL +
Sbjct: 523 WD--ELRMKL--------------------SGECRMDSDCPAMCHCEGTTVDCSGRGLKE 560
Query: 316 VPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFAN 374
+P +P TTEL + + R+ L+ + + K L++N +T + P AF
Sbjct: 561 IPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVK------LELKRNQLTGIEPNAFEG 614
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ ++L +N I ++ K F +L+ +
Sbjct: 615 ASHIQELQLGENKIKQISNKMFLGLHQLKTL 645
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 122/284 (42%), Positives = 157/284 (55%), Gaps = 56/284 (19%)
Query: 121 LLPEATTELRLE--QNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLT 178
L+ + + LRL+ N I + + F + LR + L NQI+ + AF+GL L LT
Sbjct: 164 LVTSSASLLRLDISNNAIVTVGRRVFKGAQSLRSLQLDNNQITCLDEHAFKGLVELEILT 223
Query: 179 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 238
LNNNNLT LP +F L RLR LR+S+N F CDCHLSWL R+L+ RL YT+C +PS
Sbjct: 224 LNNNNLTALPHNIFGSLGRLRALRLSDNPFACDCHLSWLSRFLRSATRLAPYTRCQSPSQ 283
Query: 239 IKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHP 298
+KGQN+ D+ + EFKCSG + E EC E SCPHP
Sbjct: 284 LKGQNVADLHDQEFKCSGLT------------------------EHAPMECGVENSCPHP 319
Query: 299 CRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRR 358
CRCADGIVDCREK L VP+ LP+ TTEL R
Sbjct: 320 CRCADGIVDCREKSLTSVPVTLPDDTTEL------------------------------R 349
Query: 359 LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
LEQN ITELPPK+F++++RLRRI L N+I+ + A + K+L
Sbjct: 350 LEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQL 393
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 122/444 (27%), Positives = 196/444 (44%), Gaps = 72/444 (16%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
+NN+ L +G F + ++T+ +++N FICDC+L WL +L + P +C +P +
Sbjct: 448 DNNIQSLANGTFDAMKSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMH 507
Query: 67 GQNILDIPEHEFKCSGPV--EKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+ I + E +FKCS K +GEC + CP C C VDC +GL ++P +P
Sbjct: 508 RRRIESLREEKFKCSWDELRMKLSGECRMDSDCPAMCHCEGTTVDCSGRGLKEIPRDIPL 567
Query: 125 ATTEL-------------------------RLEQNDITELPPKAFANYKRLRRIDLSKNQ 159
TTEL L++N +T + P AF ++ + L +N+
Sbjct: 568 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 627
Query: 160 ISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
I +++ F GL L +L L +N ++ + G F L L +L ++ N F C+CHL+W
Sbjct: 628 IKQISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAD 687
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
WL++ G +C APS ++ I ++P EFKCS + E
Sbjct: 688 WLRKKSLNGGAARCAAPSKVRDVQIKELPNSEFKCSSENSEG------------------ 729
Query: 280 CPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL------TYMVSI 333
C + CP C C +V C L ++P +P T+EL +
Sbjct: 730 ---------CLGDGYCPPSCTCTGTVVRCSRSQLKEIPRGIPAETSELYLESNEIEQIHY 780
Query: 334 DRVD--KVLLYSYISNN---------FKRWTNRSRR-LEQNDITELPPKAFANYKRLRRI 381
DR+ + L +SNN F T S + N + L +A + LR +
Sbjct: 781 DRIRHLRALTRLDLSNNQITILSNYTFANLTKLSTLIISYNKLQCLQRQALSGMHNLRVL 840
Query: 382 RLEQNDITELPPKAFANYKRLRRM 405
L N I+ LP +F + K L +
Sbjct: 841 SLHGNRISMLPEGSFEDLKSLTHI 864
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 152/332 (45%), Gaps = 46/332 (13%)
Query: 3 RTLN--NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCF 60
+TLN +N ++ + G F L L +L ++ N F C+CHL+W WL++ G +C
Sbjct: 643 KTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFADWLRKKSLNGGAARCA 702
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
APS ++ I ++P EFKCS E G C + CP C C +V C L ++P
Sbjct: 703 APSKVRDVQIKELPNSEFKCSS--ENSEG-CLGDGYCPPSCTCTGTVVRCSRSQLKEIPR 759
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAV--------------- 165
+P T+EL LE N+I ++ + + L R+DLS NQI+ ++
Sbjct: 760 GIPAETSELYLESNEIEQIHYDRIRHLRALTRLDLSNNQITILSNYTFANLTKLSTLIIS 819
Query: 166 ---------DAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSW 216
A G+ +L L+L+ N ++ LP+G F +L L + + N CDC L W
Sbjct: 820 YNKLQCLQRQALSGMHNLRVLSLHGNRISMLPEGSFEDLKSLTHIALGSNPLYCDCGLKW 879
Query: 217 LHRWLK-RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFH 275
W+K Y G+ +C P +K + IL P F C G R+ I
Sbjct: 880 FSDWIKLDYVEPGI-ARCAEPEQMKDKLILSTPSSSFVCRG---RVRNDI--------LA 927
Query: 276 PYNSCPVEKP---TGECAAEPSCPHPCRCADG 304
N+C E+P +C A P + C C G
Sbjct: 928 KCNAC-YEQPCRNQAQCVALPQREYQCLCQPG 958
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 57/117 (48%)
Query: 93 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRR 152
E CP C C VDC +GL VP + L L+ N++T + F +LR
Sbjct: 66 TEARCPRACSCTGLSVDCSHRGLTSVPRKISVDVERLDLQGNNLTVIYETDFQRLTKLRM 125
Query: 153 IDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFI 209
+ L+ NQI + ++FQ L SL L LNNN L +P+ + L L IS N+ +
Sbjct: 126 LQLTDNQIHTIERNSFQDLVSLERLRLNNNRLKAIPENLVTSSASLLRLDISNNAIV 182
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 48/118 (40%), Gaps = 12/118 (10%)
Query: 291 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVD--KVLLYSYISNN 348
E CP C C VDC +GL VP + V ++R+D L +
Sbjct: 66 TEARCPRACSCTGLSVDCSHRGLTSVPRKIS---------VDVERLDLQGNNLTVIYETD 116
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F+R T R +L N I + +F + L R+RL N + +P + L R+
Sbjct: 117 FQRLTKLRMLQLTDNQIHTIERNSFQDLVSLERLRLNNNRLKAIPENLVTSSASLLRL 174
>gi|4590406|gb|AAD26567.1|AF126540_1 slit protein [Drosophila melanogaster]
Length = 1504
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 177/451 (39%), Positives = 243/451 (53%), Gaps = 77/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNNLT LP +F L RLR LR+S+N F CDCHLSWL R+L+ RL YT+C +PS
Sbjct: 226 TLNNNNLTSLPHNIFGGLGRLRALRLSDNPFACDCHLSWLSRFLRSATRLAPYTRCQSPS 285
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+KGQN+ D+ + EFKCSG E EC AE SCPHPCRCADGIVDCREK L VP+ LP
Sbjct: 286 QLKGQNVADLHDQEFKCSGLTEHAPMECGAENSCPHPCRCADGIVDCREKSLTSVPVTLP 345
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TT++RLEQN ITELPPK+F++++RLRRIDLS N IS++A DA GLK LT+L L N
Sbjct: 346 DDTTDVRLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNK 405
Query: 184 LTYLPDGVF--------------------AELFR-------------------------- 197
+ LP GVF + FR
Sbjct: 406 IKDLPSGVFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAM 465
Query: 198 --LRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDC+L WL +L + P +C +P + + I + E +FKCS
Sbjct: 466 KSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMHRRRIESLREEKFKCS 525
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
E R K+ +GEC + CP C C VDC +GL +
Sbjct: 526 WD--ELRMKL--------------------SGECRMDSDCPAMCHCEGTTVDCTGRGLKE 563
Query: 316 VPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFAN 374
+P +P TTEL + + R+ L+ + + K L++N +T + P AF
Sbjct: 564 IPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVK------LELKRNQLTGIEPNAFEG 617
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ ++L +N I E+ K F +L+ +
Sbjct: 618 ASHIQELQLGENKIKEISNKMFLGLHQLKTL 648
Score = 217 bits (552), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 119/274 (43%), Positives = 153/274 (55%), Gaps = 54/274 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L + N IT + + F + LR + L NQI+ + AF+GL L LTLNNNNLT LP
Sbjct: 177 LDISNNVITTVGRRVFKGAQSLRSLQLDNNQITCLDEHAFKGLVELEILTLNNNNLTSLP 236
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
+F L RLR LR+S+N F CDCHLSWL R+L+ RL YT+C +PS +KGQN+ D+
Sbjct: 237 HNIFGGLGRLRALRLSDNPFACDCHLSWLSRFLRSATRLAPYTRCQSPSQLKGQNVADLH 296
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EFKCSG + E EC AE SCPHPCRCADGIVDC
Sbjct: 297 DQEFKCSGLT------------------------EHAPMECGAENSCPHPCRCADGIVDC 332
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
REK L VP+ LP+ TT++ RLEQN ITELP
Sbjct: 333 REKSLTSVPVTLPDDTTDV------------------------------RLEQNFITELP 362
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
PK+F++++RLRRI L N+I+ + A + K+L
Sbjct: 363 PKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQL 396
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 197/446 (44%), Gaps = 76/446 (17%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
+NN+ L +G F + ++T+ +++N FICDC+L WL +L + P +C +P +
Sbjct: 451 DNNIQSLANGTFDAMKSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMH 510
Query: 67 GQNILDIPEHEFKCSGPV--EKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+ I + E +FKCS K +GEC + CP C C VDC +GL ++P +P
Sbjct: 511 RRRIESLREEKFKCSWDELRMKLSGECRMDSDCPAMCHCEGTTVDCTGRGLKEIPRDIPL 570
Query: 125 ATTEL-------------------------RLEQNDITELPPKAFANYKRLRRIDLSKNQ 159
TTEL L++N +T + P AF ++ + L +N+
Sbjct: 571 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 630
Query: 160 ISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
I +++ F GL L +L L +N ++ + G F L L +L ++ N F C+CHL+W
Sbjct: 631 IKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAE 690
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
WL++ G +C APS ++ I D+P EFKCS + E
Sbjct: 691 WLRKKSLNGGAARCGAPSKVRDVQIKDLPHSEFKCSSENSEG------------------ 732
Query: 280 CPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL------------ 327
C + CP C C +V C L ++P +P T+EL
Sbjct: 733 ---------CLGDGYCPPSCTCTGTVVRCSRNQLKEIPRGIPAETSELYLESNEIEQIHY 783
Query: 328 ---TYMVSIDRVD-----KVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLR 379
++ S+ R+D +L +Y N + + + + N + L A + LR
Sbjct: 784 ERIRHLRSLTRLDLSNNQITILSNYTFANLTKLS--TLIISYNKLQCLQRHALSGLNNLR 841
Query: 380 RIRLEQNDITELPPKAFANYKRLRRM 405
+ L N I+ LP +F + K L +
Sbjct: 842 VLSLHGNRISMLPEGSFEDLKSLTHI 867
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 154/332 (46%), Gaps = 46/332 (13%)
Query: 3 RTLN--NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCF 60
+TLN +N ++ + G F L L +L ++ N F C+CHL+W WL++ G +C
Sbjct: 646 KTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCG 705
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
APS ++ I D+P EFKCS E G C + CP C C +V C L ++P
Sbjct: 706 APSKVRDVQIKDLPHSEFKCSS--ENSEG-CLGDGYCPPSCTCTGTVVRCSRNQLKEIPR 762
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAV--------------- 165
+P T+EL LE N+I ++ + + + L R+DLS NQI+ ++
Sbjct: 763 GIPAETSELYLESNEIEQIHYERIRHLRSLTRLDLSNNQITILSNYTFANLTKLSTLIIS 822
Query: 166 ---------DAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSW 216
A GL +L L+L+ N ++ LP+G F +L L + + N CDC L W
Sbjct: 823 YNKLQCLQRHALSGLNNLRVLSLHGNRISMLPEGSFEDLKSLTHIALGSNPLYCDCGLKW 882
Query: 217 LHRWLK-RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFH 275
W+K Y G+ +C P +K + IL P F C G R+ I +C+ F
Sbjct: 883 FSDWIKLDYVEPGI-ARCAEPEQMKDKLILSTPSSSFVCRG---RVRNDIL-AKCNACF- 936
Query: 276 PYNSCPVEKP---TGECAAEPSCPHPCRCADG 304
E+P +C A P + C C G
Sbjct: 937 -------EQPCQNQAQCVALPQREYQCLCQPG 961
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 8/116 (6%)
Query: 291 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFK 350
E CP C C VDC +GL VP + L + + ++Y +F+
Sbjct: 69 TEARCPRVCSCTGLNVDCSHRGLTSVPRKISADVERL----ELQGNNLTVIY---ETDFQ 121
Query: 351 RWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R T R +L N I + +F + L R+RL N + +P + L R+
Sbjct: 122 RLTKLRMLQLTDNQIHTIERNSFQDLVSLERLRLNNNRLKAIPENFVTSSASLLRL 177
>gi|347968570|ref|XP_312121.5| AGAP002793-PA [Anopheles gambiae str. PEST]
gi|333467943|gb|EAA07783.5| AGAP002793-PA [Anopheles gambiae str. PEST]
Length = 1451
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 183/451 (40%), Positives = 241/451 (53%), Gaps = 77/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T LP +FA + RLR LR+SEN F CDCHLSWL R+LK RL YT+C +P
Sbjct: 171 TLNNNNITTLPRDMFAGMPRLRALRLSENPFACDCHLSWLARYLKNASRLAPYTRCHSPG 230
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+KGQN+ D+ E +FKCSG E EC CPHPCRCADGIVDCREK L VP LP
Sbjct: 231 QLKGQNVADLHEQDFKCSGLTENAPMECGGRSLCPHPCRCADGIVDCREKSLTTVPSTLP 290
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLT-------- 175
E TTELRLEQN ITE+PPKAFAN++RL+RIDLS N IS+VA DAF GLKSLT
Sbjct: 291 EDTTELRLEQNYITEIPPKAFANHRRLKRIDLSNNNISRVAYDAFSGLKSLTSLVLYGNK 350
Query: 176 ----------------S------------------------LTLNNNNLTYLPDGVFAEL 195
L+L +NN+ L +G F L
Sbjct: 351 IKDLPASVFKGLTSLQLLLLNANEISCVRRDAFKDLHNLSLLSLYDNNIQSLANGTFDSL 410
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL ++ N FICDC+L WL +L + P KC AP ++ + I + + +FKC+
Sbjct: 411 RSIQTLHLARNPFICDCNLRWLGDYLHQNPIETSGAKCDAPKRMQRRRIEALKDEKFKCT 470
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
+ SKI K +GEC + CP C C VDC +GL +
Sbjct: 471 ----DDYSKI------------------KYSGECRMDQECPAACHCDRTTVDCSGRGLKE 508
Query: 316 VPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFAN 374
+P +P TTEL + ++R+ L+ + N K L +N I+ + P AF
Sbjct: 509 IPRDIPLYTTELLLNDNELNRIKSDGLFGRLPNLAK------LDLRRNQISGIEPNAFEG 562
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R++ + L +N I E+ K F +L+ +
Sbjct: 563 ATRIQELFLSENKIAEVHNKMFLGLHQLKTL 593
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 125/287 (43%), Positives = 154/287 (53%), Gaps = 56/287 (19%)
Query: 121 LLPEATTELRLE--QNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLT 178
L A LRL+ N +T +P +AF LR + L NQI+ + A +GL L LT
Sbjct: 112 FLSSAANLLRLDLSHNALTAVPKRAFKGAPALRSLQLDNNQITCLDEGAVKGLTELEILT 171
Query: 179 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 238
LNNNN+T LP +FA + RLR LR+SEN F CDCHLSWL R+LK RL YT+C +P
Sbjct: 172 LNNNNITTLPRDMFAGMPRLRALRLSENPFACDCHLSWLARYLKNASRLAPYTRCHSPGQ 231
Query: 239 IKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHP 298
+KGQN+ D+ E +FKCSG + E EC CPHP
Sbjct: 232 LKGQNVADLHEQDFKCSGLT------------------------ENAPMECGGRSLCPHP 267
Query: 299 CRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRR 358
CRCADGIVDCREK L VP LPE TTEL R
Sbjct: 268 CRCADGIVDCREKSLTTVPSTLPEDTTEL------------------------------R 297
Query: 359 LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
LEQN ITE+PPKAFAN++RL+RI L N+I+ + AF+ K L +
Sbjct: 298 LEQNYITEIPPKAFANHRRLKRIDLSNNNISRVAYDAFSGLKSLTSL 344
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 196/429 (45%), Gaps = 60/429 (13%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +NN+ L +G F L ++TL ++ N FICDC+L WL +L + P KC AP
Sbjct: 393 SLYDNNIQSLANGTFDSLRSIQTLHLARNPFICDCNLRWLGDYLHQNPIETSGAKCDAPK 452
Query: 64 HIKGQNILDIPEHEFKCSGPVEKP--TGECAAEPSCPHPCRCADGIVDCREKGLNKVPIL 121
++ + I + + +FKC+ K +GEC + CP C C VDC +GL ++P
Sbjct: 453 RMQRRRIEALKDEKFKCTDDYSKIKYSGECRMDQECPAACHCDRTTVDCSGRGLKEIPRD 512
Query: 122 LPEATTELRLEQND-------------------------ITELPPKAFANYKRLRRIDLS 156
+P TTEL L N+ I+ + P AF R++ + LS
Sbjct: 513 IPLYTTELLLNDNELNRIKSDGLFGRLPNLAKLDLRRNQISGIEPNAFEGATRIQELFLS 572
Query: 157 KNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSW 216
+N+I++V F GL L +L+L +N +T + G F L L L ++ N F C+CHL+W
Sbjct: 573 ENKIAEVHNKMFLGLHQLKTLSLYDNIITCVMPGSFDYLTSLTQLNLASNPFRCNCHLAW 632
Query: 217 LHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHP 276
WL++ G +C +PS ++ I D+P +FKC+ S M+
Sbjct: 633 FSDWLRKKQLNGPPARCTSPSKVRDVPIKDLPHFDFKCT-SDMDQ--------------- 676
Query: 277 YNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRV 336
C E CP C C +V C L ++P +P TTEL ++
Sbjct: 677 -----------GCLGEGYCPPSCTCTGTVVRCSRNKLKEIPKSIPAETTELY----LESN 721
Query: 337 DKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
+ +++S ++ K T L N I L FAN +L + + N++ + A
Sbjct: 722 EISMIHSNRISHLKALTRLD--LSNNQIGILSNHTFANLSKLSTLIISYNNLQCVQKYAL 779
Query: 397 ANYKRLRRM 405
A L+ +
Sbjct: 780 AGLTNLKVL 788
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/327 (31%), Positives = 155/327 (47%), Gaps = 40/327 (12%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L L ++ N F C+CHL+W WL++ G +C +PS
Sbjct: 594 SLYDNIITCVMPGSFDYLTSLTQLNLASNPFRCNCHLAWFSDWLRKKQLNGPPARCTSPS 653
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ I D+P +FKC+ +++ C E CP C C +V C L ++P +P
Sbjct: 654 KVRDVPIKDLPHFDFKCTSDMDQG---CLGEGYCPPSCTCTGTVVRCSRNKLKEIPKSIP 710
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAF--------------- 168
TTEL LE N+I+ + ++ K L R+DLS NQI ++ F
Sbjct: 711 AETTELYLESNEISMIHSNRISHLKALTRLDLSNNQIGILSNHTFANLSKLSTLIISYNN 770
Query: 169 ---------QGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GL +L L+L+ N ++ +P+G F +L + + + N CDC L WL
Sbjct: 771 LQCVQKYALAGLTNLKVLSLHGNKISMIPEGTFNDLQSITHIALGSNPLYCDCSLRWLSE 830
Query: 220 WLKR-YPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGS-SMETRSKIYREECSTDFHPY 277
W+KR Y G+ +C P +K + IL P +F CSG S E SK + C T P
Sbjct: 831 WVKRDYVEPGI-ARCAEPEPMKDKLILSTPAAQFVCSGKVSNEILSKC--DACYT--FPC 885
Query: 278 NSCPVEKPTGECAAEPSCPHPCRCADG 304
K C+A P + C+C G
Sbjct: 886 ------KNEATCSALPERQYECKCKPG 906
>gi|91078086|ref|XP_972265.1| PREDICTED: similar to AGAP002793-PA [Tribolium castaneum]
Length = 1430
Score = 307 bits (787), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 184/452 (40%), Positives = 245/452 (54%), Gaps = 79/452 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNNLT++ +F+ +FRLRTLR+S+N CDC LSWL R+L+ PRL YT+C +P+
Sbjct: 169 TLNNNNLTWIGKDMFSNMFRLRTLRLSDNLLHCDCQLSWLARYLRHSPRLAQYTRCHSPN 228
Query: 64 HIKGQNILDIPEHEFKCSGPVEKP-TGECAAEPSCPHPCRCADGIVDCREKGLNKVPILL 122
H+KGQNI D+ + EFKCSG E+ GEC +EP CPHPCRCADGIVDCREKGL KVP L
Sbjct: 229 HLKGQNIADLQDQEFKCSGLAERAINGECISEPECPHPCRCADGIVDCREKGLTKVPDHL 288
Query: 123 PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLK---------- 172
PE TTELRLEQN+I E+P KAFA +KRLRRIDLS N+ISK+A DAFQGLK
Sbjct: 289 PEGTTELRLEQNEIVEIPTKAFAAHKRLRRIDLSNNKISKIASDAFQGLKALTSLVLYGN 348
Query: 173 --------------SLTSLTLN------------------------NNNLTYLPDGVFAE 194
SL L LN +NN+ L +G F
Sbjct: 349 KIKDLPAGVFQGLVSLQLLLLNANEITCIRKDTFSDLHSLSLLSLYDNNIQSLANGSFDS 408
Query: 195 LFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
L ++TL ++ N FICDC+L WL +L R P +C P ++ + I + + +FKC
Sbjct: 409 LRSIQTLHLARNPFICDCNLKWLAEYLHRNPIETSGARCDTPKRMQRRRIEALKDEKFKC 468
Query: 255 SGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLN 314
+EE T F GEC + +CP C C +VDC KGL
Sbjct: 469 ------------QEEFRTRF-----------AGECLIDNACPSGCTCDGTVVDCSGKGLK 505
Query: 315 KVPILLPEATTE-LTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFA 373
++P +P TTE L + + R+ L+ + N + L +N IT + +F
Sbjct: 506 EIPRDIPVYTTELLLHDNELGRIKSDGLFGRLPNLIR------LDLRRNQITGIEENSFE 559
Query: 374 NYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R+ + L +N + E+ K F L+ +
Sbjct: 560 GASRIYELLLSENKLLEIHNKMFLGLHNLKVL 591
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 140/377 (37%), Positives = 179/377 (47%), Gaps = 101/377 (26%)
Query: 77 EFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDI 136
E+ C+ P CP C C I DC +G +VP +P T L L+ N+I
Sbjct: 20 EWSCAEPGNDVAHLSFTALRCPRGCTCTGTITDCSHRGFTQVPKNIPPETERLDLQGNNI 79
Query: 137 TELPPKAFANYKRLR------------------------RIDLSKNQISKVAVDAFQGL- 171
T L F + +LR R+D+S N IS + +G+
Sbjct: 80 TVLFESDFQDLGKLRILQLTDNQIHTIERDAFQDLVNLERLDISHNLISVIGRKTLRGIT 139
Query: 172 -----------------------KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
K L LTLNNNNLT++ +F+ +FRLRTLR+S+N
Sbjct: 140 AIKNLQLDNNRITCIDDQALRSFKDLEILTLNNNNLTWIGKDMFSNMFRLRTLRLSDNLL 199
Query: 209 ICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYRE 268
CDC LSWL R+L+ PRL YT+C +P+H+KGQNI D+ + EFKCSG + +
Sbjct: 200 HCDCQLSWLARYLRHSPRLAQYTRCHSPNHLKGQNIADLQDQEFKCSGLAERAIN----- 254
Query: 269 ECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELT 328
GEC +EP CPHPCRCADGIVDCREKGL KVP LPE TTEL
Sbjct: 255 ------------------GECISEPECPHPCRCADGIVDCREKGLTKVPDHLPEGTTEL- 295
Query: 329 YMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDI 388
RLEQN+I E+P KAFA +KRLRRI L N I
Sbjct: 296 -----------------------------RLEQNEIVEIPTKAFAAHKRLRRIDLSNNKI 326
Query: 389 TELPPKAFANYKRLRRM 405
+++ AF K L +
Sbjct: 327 SKIASDAFQGLKALTSL 343
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 125/445 (28%), Positives = 200/445 (44%), Gaps = 75/445 (16%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
+NN+ L +G F L ++TL ++ N FICDC+L WL +L R P +C P ++
Sbjct: 395 DNNIQSLANGSFDSLRSIQTLHLARNPFICDCNLKWLAEYLHRNPIETSGARCDTPKRMQ 454
Query: 67 GQNILDIPEHEFKCSGPVE-KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEA 125
+ I + + +FKC + GEC + +CP C C +VDC KGL ++P +P
Sbjct: 455 RRRIEALKDEKFKCQEEFRTRFAGECLIDNACPSGCTCDGTVVDCSGKGLKEIPRDIPVY 514
Query: 126 TTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG-------------- 170
TTEL L N++ + F L R+DL +NQI+ + ++F+G
Sbjct: 515 TTELLLHDNELGRIKSDGLFGRLPNLIRLDLRRNQITGIEENSFEGASRIYELLLSENKL 574
Query: 171 ----------LKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW 220
L +L L+LNNN +T + G F L L TL + +N F+C+CHL+W W
Sbjct: 575 LEIHNKMFLGLHNLKVLSLNNNQITCVMPGSFDHLTSLHTLNLMQNPFMCNCHLAWFSDW 634
Query: 221 LKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC 280
LK G KC P+ +K I ++P++EFKC+ + +
Sbjct: 635 LKSKGLSGSPPKCAGPTRVKDVLIRELPKNEFKCTSDNDQG------------------- 675
Query: 281 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL------------- 327
C E CP C C +V C L ++P +P T+EL
Sbjct: 676 --------CLGENYCPPKCSCTGTVVRCSRAKLTEIPRGIPPETSELYLDINEITTIQAD 727
Query: 328 --TYMVSIDRVD----KVLLYSYISNNFKRWTNRSRR-LEQNDITELPPKAFANYKRLRR 380
+++ S+ R+D ++ + S +N F + S + N + + A K LR
Sbjct: 728 RISHLKSLTRLDLSSNQIGMLS--NNTFANLSKLSTLIISYNKLQCVQRNALTGLKSLRI 785
Query: 381 IRLEQNDITELPPKAFANYKRLRRM 405
+ L N I+ +P F+N K + +
Sbjct: 786 LSLHGNQISMIPEGTFSNLKSISHI 810
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 162/327 (49%), Gaps = 40/327 (12%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+LNNN +T + G F L L TL + +N F+C+CHL+W WLK G KC P+
Sbjct: 592 SLNNNQITCVMPGSFDHLTSLHTLNLMQNPFMCNCHLAWFSDWLKSKGLSGSPPKCAGPT 651
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I ++P++EFKC+ ++ C E CP C C +V C L ++P +P
Sbjct: 652 RVKDVLIRELPKNEFKCTSDNDQG---CLGENYCPPKCSCTGTVVRCSRAKLTEIPRGIP 708
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
T+EL L+ N+IT + ++ K L R+DLS NQI ++ + F
Sbjct: 709 PETSELYLDINEITTIQADRISHLKSLTRLDLSSNQIGMLSNNTFANLSKLSTLIISYNK 768
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N ++ +P+G F+ L + + + N CDC L WL
Sbjct: 769 LQCVQRNALTGLKSLRILSLHGNQISMIPEGTFSNLKSISHIALGSNPLYCDCSLRWLSD 828
Query: 220 WLK-RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGS-SMETRSKIYREECSTDFHPY 277
W+K Y G+ C P+++K ++IL P F+C G S E +K C F
Sbjct: 829 WVKVDYVEPGI-AHCAEPANMKDKSILSTPSTAFQCKGKVSNEILAK-----CDACF--- 879
Query: 278 NSCPVEKPTGECAAEPSCPHPCRCADG 304
+ P K G+CA +P + C+CA G
Sbjct: 880 -TFPC-KNGGKCATQPERDYECKCAPG 904
>gi|195429361|ref|XP_002062731.1| GK19542 [Drosophila willistoni]
gi|194158816|gb|EDW73717.1| GK19542 [Drosophila willistoni]
Length = 1514
Score = 307 bits (786), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 178/451 (39%), Positives = 244/451 (54%), Gaps = 77/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNNLT LP F L RLR LR+S+N F CDCHLSWL R+L+ PRL YT+C +PS
Sbjct: 236 TLNNNNLTALPHNAFGGLGRLRALRLSDNPFACDCHLSWLSRYLRSAPRLAPYTRCQSPS 295
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+KGQN+ D+ + EFKCSG E EC E SCPHPCRCADGIVDCREK L VP+ LP
Sbjct: 296 QLKGQNVADLHDQEFKCSGLTEHAPMECGVENSCPHPCRCADGIVDCREKSLTSVPVTLP 355
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLT-------- 175
+ TTELRLEQN ITELPPK+F++++RLRRIDLS N IS++A DA GLK LT
Sbjct: 356 DDTTELRLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNK 415
Query: 176 ----------------SLTLN------------------------NNNLTYLPDGVFAEL 195
L LN +NN+ L +G F +
Sbjct: 416 IKDLPSGVFKGLSSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAM 475
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDC+L WL +L + P +C +P + + I + E +FKCS
Sbjct: 476 KSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMHRRRIESLREEKFKCS 535
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
E R K+ +GEC + CP C C VDC +GL +
Sbjct: 536 WD--ELRMKL--------------------SGECRMDSDCPSMCHCEGTTVDCSGRGLKE 573
Query: 316 VPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFAN 374
+P +P TTEL + + R++ L+ ++ + K L++N +T + P AF
Sbjct: 574 IPRDIPLHTTELLLNDNELGRINSDGLFGHLPHLVK------LELKRNQLTGIEPNAFEG 627
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R++ ++L +N I E+ K F +L+ +
Sbjct: 628 ASRIQDLQLGENKIKEISNKMFLGLHQLKTL 658
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 120/274 (43%), Positives = 151/274 (55%), Gaps = 54/274 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L + N I + + F + LR + L NQI+ + AF+GL L LTLNNNNLT LP
Sbjct: 187 LDISHNLIATVGRRVFKGAQSLRSLQLDNNQITCMDEHAFKGLVELEILTLNNNNLTALP 246
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F L RLR LR+S+N F CDCHLSWL R+L+ PRL YT+C +PS +KGQN+ D+
Sbjct: 247 HNAFGGLGRLRALRLSDNPFACDCHLSWLSRYLRSAPRLAPYTRCQSPSQLKGQNVADLH 306
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EFKCSG + E EC E SCPHPCRCADGIVDC
Sbjct: 307 DQEFKCSGLT------------------------EHAPMECGVENSCPHPCRCADGIVDC 342
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
REK L VP+ LP+ TTEL RLEQN ITELP
Sbjct: 343 REKSLTSVPVTLPDDTTEL------------------------------RLEQNFITELP 372
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
PK+F++++RLRRI L N+I+ + A + K+L
Sbjct: 373 PKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQL 406
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 199/446 (44%), Gaps = 76/446 (17%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
+NN+ L +G F + ++T+ +++N FICDC+L WL +L + P +C +P +
Sbjct: 461 DNNIQSLANGTFDAMKSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMH 520
Query: 67 GQNILDIPEHEFKCSGPV--EKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+ I + E +FKCS K +GEC + CP C C VDC +GL ++P +P
Sbjct: 521 RRRIESLREEKFKCSWDELRMKLSGECRMDSDCPSMCHCEGTTVDCSGRGLKEIPRDIPL 580
Query: 125 ATTEL-------------------------RLEQNDITELPPKAFANYKRLRRIDLSKNQ 159
TTEL L++N +T + P AF R++ + L +N+
Sbjct: 581 HTTELLLNDNELGRINSDGLFGHLPHLVKLELKRNQLTGIEPNAFEGASRIQDLQLGENK 640
Query: 160 ISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
I +++ F GL L +L L +N ++ + G F L L +L ++ N F C+CHL+W
Sbjct: 641 IKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAD 700
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
WL++ G +C AP+ ++ I D+P +EFKCS + E
Sbjct: 701 WLRKKSLNGGTARCAAPAKVRDVQIKDLPHNEFKCSSENSEG------------------ 742
Query: 280 CPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL------------ 327
C + CP C C +V C L ++P +P T+EL
Sbjct: 743 ---------CLGDGYCPPSCTCTGTVVRCSRNQLKEIPRGIPAETSELYLESNEIEQIHY 793
Query: 328 ---TYMVSIDRVD-----KVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLR 379
++ S+ R+D +L +Y N + + + + N + L A + LR
Sbjct: 794 ERIRHLRSLTRLDLSNNQITILSNYTFANLTKLS--TLIISYNKLQCLQRHALSGLNNLR 851
Query: 380 RIRLEQNDITELPPKAFANYKRLRRM 405
+ L N I+ LP +F + K L +
Sbjct: 852 VLSLHGNRISMLPEGSFEDLKSLTHI 877
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 157/332 (47%), Gaps = 46/332 (13%)
Query: 3 RTLN--NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCF 60
+TLN +N ++ + G F L L +L ++ N F C+CHL+W WL++ G +C
Sbjct: 656 KTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFADWLRKKSLNGGTARCA 715
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
AP+ ++ I D+P +EFKCS E G C + CP C C +V C L ++P
Sbjct: 716 APAKVRDVQIKDLPHNEFKCSS--ENSEG-CLGDGYCPPSCTCTGTVVRCSRNQLKEIPR 772
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAV--------------- 165
+P T+EL LE N+I ++ + + + L R+DLS NQI+ ++
Sbjct: 773 GIPAETSELYLESNEIEQIHYERIRHLRSLTRLDLSNNQITILSNYTFANLTKLSTLIIS 832
Query: 166 ---------DAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSW 216
A GL +L L+L+ N ++ LP+G F +L L + + N CDC L W
Sbjct: 833 YNKLQCLQRHALSGLNNLRVLSLHGNRISMLPEGSFEDLKSLTHIALGSNPLYCDCSLKW 892
Query: 217 LHRWLK-RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFH 275
W+K Y G+ +C P +K + IL P F C G + R++I +
Sbjct: 893 FSDWIKLDYVEPGI-ARCAEPEQMKDKLILSTPSSNFVCRG---KVRNEILAK------- 941
Query: 276 PYNSCPVEKP---TGECAAEPSCPHPCRCADG 304
N+C E+P +C A P + C C G
Sbjct: 942 -CNAC-YEQPCQNKAQCVALPEREYQCLCQPG 971
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 55/114 (48%)
Query: 93 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRR 152
E CP C C+ VDC +GL +VP + L L+ N++T + F +LR
Sbjct: 79 TEARCPRVCSCSGLTVDCSHRGLTQVPRKISADVERLDLQGNNLTVIYETDFQRLTKLRM 138
Query: 153 IDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
+ L+ NQI + +A Q L SL L LNNN L +P+ L L IS N
Sbjct: 139 LQLTDNQIHTIEKNALQDLVSLERLRLNNNRLKAIPENFVTSSASLLRLDISHN 192
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 8/116 (6%)
Query: 291 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFK 350
E CP C C+ VDC +GL +VP + L + + ++Y +F+
Sbjct: 79 TEARCPRVCSCSGLTVDCSHRGLTQVPRKISADVERL----DLQGNNLTVIY---ETDFQ 131
Query: 351 RWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R T R +L N I + A + L R+RL N + +P + L R+
Sbjct: 132 RLTKLRMLQLTDNQIHTIEKNALQDLVSLERLRLNNNRLKAIPENFVTSSASLLRL 187
>gi|195174832|ref|XP_002028174.1| GL16263 [Drosophila persimilis]
gi|194116644|gb|EDW38687.1| GL16263 [Drosophila persimilis]
Length = 1426
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 171/403 (42%), Positives = 228/403 (56%), Gaps = 53/403 (13%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNNLT LP F L RLR LR+S+N F CDCHLSWL R+L+ PRL YT+C +PS
Sbjct: 249 TLNNNNLTALPHNAFGGLGRLRALRLSDNPFACDCHLSWLSRYLRSAPRLAPYTRCQSPS 308
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+KGQN+ D+ + EFKCSG E EC AE SCPHPCRCADGIVDCREK L VP+ LP
Sbjct: 309 QLKGQNVADLHDQEFKCSGLTEHAPMECGAENSCPHPCRCADGIVDCREKSLTSVPVTLP 368
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TTELRLEQN ITELPPK+F++++RLRRIDLS N ISK+A DA GLK LT
Sbjct: 369 DDTTELRLEQNFITELPPKSFSSFRRLRRIDLSNNNISKIAHDALSGLKQLT-------- 420
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
TL +++N FICDC+L WL +L + P +C +P + +
Sbjct: 421 ----------------TLHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMHRRR 464
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
I + E +FKCS E R K+ +GEC + CP C C
Sbjct: 465 IESLREEKFKCSWD--ELRMKL--------------------SGECRMDSDCPAMCHCEG 502
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRWTNRSRRLEQN 362
VDC +GL ++P +P TTEL + + ++ L+ + + K L++N
Sbjct: 503 TTVDCAGRGLKEIPRDIPLHTTELLLNDNELGSINSDGLFGRLPHLVK------LELKRN 556
Query: 363 DITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+T + P AF ++ ++L +N I E+ K F +L+ +
Sbjct: 557 QLTGIEPNAFEGASHIQDLQLGENKIKEISNKMFLGLHQLKTL 599
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/274 (43%), Positives = 153/274 (55%), Gaps = 54/274 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L + N I + + F + LR + L NQ++ + AF+GL L LTLNNNNLT LP
Sbjct: 200 LDISHNVIATVGRRVFKGAQSLRSLQLDNNQVTCLDEHAFKGLVELEILTLNNNNLTALP 259
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F L RLR LR+S+N F CDCHLSWL R+L+ PRL YT+C +PS +KGQN+ D+
Sbjct: 260 HNAFGGLGRLRALRLSDNPFACDCHLSWLSRYLRSAPRLAPYTRCQSPSQLKGQNVADLH 319
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EFKCSG + E EC AE SCPHPCRCADGIVDC
Sbjct: 320 DQEFKCSGLT------------------------EHAPMECGAENSCPHPCRCADGIVDC 355
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
REK L VP+ LP+ TTEL RLEQN ITELP
Sbjct: 356 REKSLTSVPVTLPDDTTEL------------------------------RLEQNFITELP 385
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
PK+F++++RLRRI L N+I+++ A + K+L
Sbjct: 386 PKSFSSFRRLRRIDLSNNNISKIAHDALSGLKQL 419
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 124/448 (27%), Positives = 200/448 (44%), Gaps = 76/448 (16%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+NNN++ + + L +L TL +++N FICDC+L WL +L + P +C +P
Sbjct: 400 LSNNNISKIAHDALSGLKQLTTLHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKR 459
Query: 65 IKGQNILDIPEHEFKCSGPV--EKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILL 122
+ + I + E +FKCS K +GEC + CP C C VDC +GL ++P +
Sbjct: 460 MHRRRIESLREEKFKCSWDELRMKLSGECRMDSDCPAMCHCEGTTVDCAGRGLKEIPRDI 519
Query: 123 PEATTEL-------------------------RLEQNDITELPPKAFANYKRLRRIDLSK 157
P TTEL L++N +T + P AF ++ + L +
Sbjct: 520 PLHTTELLLNDNELGSINSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQDLQLGE 579
Query: 158 NQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWL 217
N+I +++ F GL L +L L +N ++ + G F L L +L ++ N F C+CHL+W
Sbjct: 580 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWF 639
Query: 218 HRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPY 277
WL++ G +C APS ++ I D+P +EFKCS + E
Sbjct: 640 AEWLRKKSLNGGAARCAAPSKVRDVQIKDLPHNEFKCSSENSEG---------------- 683
Query: 278 NSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL---------- 327
C + CP C C +V C L ++P +P T+EL
Sbjct: 684 -----------CLGDGYCPPSCTCTGTVVRCSRNQLKEIPRGIPAETSELYLESNEIEQI 732
Query: 328 -----TYMVSIDRVD----KVLLYSYISNNFKRWTNRSRR-LEQNDITELPPKAFANYKR 377
++ S+ R+D ++ + S +N F T S + N + L A +
Sbjct: 733 HYERIRHLRSLTRLDLSNNQITILS--NNTFANLTKLSTLIISYNKLQCLQRHALSGLNN 790
Query: 378 LRRIRLEQNDITELPPKAFANYKRLRRM 405
LR + L N I+ LP +F + K L +
Sbjct: 791 LRVLSLHGNRISMLPEGSFEDLKSLTHI 818
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 138/281 (49%), Gaps = 31/281 (11%)
Query: 3 RTLN--NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCF 60
+TLN +N ++ + G F L L +L ++ N F C+CHL+W WL++ G +C
Sbjct: 597 KTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCA 656
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
APS ++ I D+P +EFKCS E G C + CP C C +V C L ++P
Sbjct: 657 APSKVRDVQIKDLPHNEFKCSS--ENSEG-CLGDGYCPPSCTCTGTVVRCSRNQLKEIPR 713
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAF------------ 168
+P T+EL LE N+I ++ + + + L R+DLS NQI+ ++ + F
Sbjct: 714 GIPAETSELYLESNEIEQIHYERIRHLRSLTRLDLSNNQITILSNNTFANLTKLSTLIIS 773
Query: 169 ------------QGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSW 216
GL +L L+L+ N ++ LP+G F +L L + + N CDC L W
Sbjct: 774 YNKLQCLQRHALSGLNNLRVLSLHGNRISMLPEGSFEDLKSLTHIALGSNPLYCDCSLKW 833
Query: 217 LHRWLK-RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K Y G+ +C P +K + IL P F C G
Sbjct: 834 FSDWIKLDYVEPGI-ARCAEPEQMKDKLILSTPSSNFVCRG 873
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 56/114 (49%)
Query: 93 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRR 152
E CP C C+ VDC +GL ++P + L L+ N++T + F +LR
Sbjct: 92 TEARCPRVCSCSGLTVDCSHRGLTQIPRKISADVERLDLQGNNLTVIYETDFQRLTKLRM 151
Query: 153 IDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
+ L+ NQI + ++FQ L SL L LNNN L +P+ L L IS N
Sbjct: 152 LQLTDNQIHTIERNSFQDLVSLERLRLNNNRLKAIPENFVTSSANLLRLDISHN 205
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 8/116 (6%)
Query: 291 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFK 350
E CP C C+ VDC +GL ++P + L + + ++Y +F+
Sbjct: 92 TEARCPRVCSCSGLTVDCSHRGLTQIPRKISADVERL----DLQGNNLTVIY---ETDFQ 144
Query: 351 RWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R T R +L N I + +F + L R+RL N + +P + L R+
Sbjct: 145 RLTKLRMLQLTDNQIHTIERNSFQDLVSLERLRLNNNRLKAIPENFVTSSANLLRL 200
>gi|8615|emb|CAA37910.1| slit protein [Drosophila melanogaster]
Length = 1480
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 176/451 (39%), Positives = 242/451 (53%), Gaps = 77/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNNLT LP +F L RLR LR+S+N F CDCHLSWL R+L+ RL YT+C +PS
Sbjct: 202 TLNNNNLTSLPHNIFGGLGRLRALRLSDNPFACDCHLSWLSRFLRSATRLAPYTRCQSPS 261
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+KGQN+ D+ + EFKCSG E EC AE SCPHPCRCADGIVDCREK L VP+ LP
Sbjct: 262 QLKGQNVADLHDQEFKCSGLTEHAPMECGAENSCPHPCRCADGIVDCREKSLTSVPVTLP 321
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TT++RLEQN ITELPPK+F++++RLRRIDLS N IS++A DA GLK LT+L L N
Sbjct: 322 DDTTDVRLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNK 381
Query: 184 LTYLPDGVF--------------------AELFR-------------------------- 197
+ LP GVF + FR
Sbjct: 382 IKDLPSGVFKGLGSLRLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAM 441
Query: 198 --LRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDC+L WL +L + P +C +P + + I + E +FKCS
Sbjct: 442 KSMKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMHRRRIESLREEKFKCS 501
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
E R K+ +GEC + CP C C VDC + L +
Sbjct: 502 WG--ELRMKL--------------------SGECRMDSDCPAMCHCEGTTVDCTGRRLKE 539
Query: 316 VPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFAN 374
+P +P TTEL + + R+ L+ + + K L++N +T + P AF
Sbjct: 540 IPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVK------LELKRNQLTGIEPNAFEG 593
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ ++L +N I E+ K F +L+ +
Sbjct: 594 ASHIQELQLGENKIKEISNKMFLGLHQLKTL 624
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 133/358 (37%), Positives = 171/358 (47%), Gaps = 102/358 (28%)
Query: 93 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR- 151
E CP C C VDC +GL VP + L L+ N++T + F +LR
Sbjct: 69 TEARCPRVCSCTGLNVDCSHRGLTSVPRKISADVERLELQGNNLTVIYETDFQRLTKLRM 128
Query: 152 -----------------------RIDLSKNQISKVAVDAFQGLKSLTSL----------- 177
R+D+S N I+ V F+G +SL SL
Sbjct: 129 LQLTDNQIHTIERNSFQDLVSLERLDISNNVITTVGRRVFKGAQSLRSLQLDNNQITCLD 188
Query: 178 -------------TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRY 224
TLNNNNLT LP +F L RLR LR+S+N F CDCHLSWL R+L+
Sbjct: 189 EHAFKGLVELEILTLNNNNLTSLPHNIFGGLGRLRALRLSDNPFACDCHLSWLSRFLRSA 248
Query: 225 PRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEK 284
RL YT+C +PS +KGQN+ D+ + EFKCSG + E
Sbjct: 249 TRLAPYTRCQSPSQLKGQNVADLHDQEFKCSGLT------------------------EH 284
Query: 285 PTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSY 344
EC AE SCPHPCRCADGIVDCREK L VP+ LP+ TT++
Sbjct: 285 APMECGAENSCPHPCRCADGIVDCREKSLTSVPVTLPDDTTDV----------------- 327
Query: 345 ISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
RLEQN ITELPPK+F++++RLRRI L N+I+ + A + K+L
Sbjct: 328 -------------RLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQL 372
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 118/446 (26%), Positives = 197/446 (44%), Gaps = 76/446 (17%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
+NN+ L +G F + ++T+ +++N FICDC+L WL +L + P +C +P +
Sbjct: 427 DNNIQSLANGTFDAMKSMKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMH 486
Query: 67 GQNILDIPEHEFKCS-GPVE-KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+ I + E +FKCS G + K +GEC + CP C C VDC + L ++P +P
Sbjct: 487 RRRIESLREEKFKCSWGELRMKLSGECRMDSDCPAMCHCEGTTVDCTGRRLKEIPRDIPL 546
Query: 125 ATTEL-------------------------RLEQNDITELPPKAFANYKRLRRIDLSKNQ 159
TTEL L++N +T + P AF ++ + L +N+
Sbjct: 547 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 606
Query: 160 ISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
I +++ F GL L +L L +N ++ + G F L L +L ++ N F C+CHL+W
Sbjct: 607 IKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAE 666
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
+++ G +C APS ++ I D+P EFKCS + E
Sbjct: 667 CVRKKSLNGGAARCGAPSKVRDVQIKDLPHSEFKCSSENSEG------------------ 708
Query: 280 CPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL------------ 327
C + CP C C +V C L ++P +P T+EL
Sbjct: 709 ---------CLGDGYCPPSCTCTGTVVACSRNQLKEIPRGIPAETSELYLESNEIEQIHY 759
Query: 328 ---TYMVSIDRVD-----KVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLR 379
++ S+ R+D +L +Y N + + + + N + L A + LR
Sbjct: 760 ERIRHLRSLTRLDLSNNQITILSNYTFANLTKLS--TLIISYNKLQCLQRHALSGLNNLR 817
Query: 380 RIRLEQNDITELPPKAFANYKRLRRM 405
+ L N I+ LP +F + K L +
Sbjct: 818 VVSLHGNRISMLPEGSFEDLKSLTHI 843
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 153/332 (46%), Gaps = 46/332 (13%)
Query: 3 RTLN--NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCF 60
+TLN +N ++ + G F L L +L ++ N F C+CHL+W +++ G +C
Sbjct: 622 KTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAECVRKKSLNGGAARCG 681
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
APS ++ I D+P EFKCS E G C + CP C C +V C L ++P
Sbjct: 682 APSKVRDVQIKDLPHSEFKCSS--ENSEG-CLGDGYCPPSCTCTGTVVACSRNQLKEIPR 738
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVA---------------- 164
+P T+EL LE N+I ++ + + + L R+DLS NQI+ ++
Sbjct: 739 GIPAETSELYLESNEIEQIHYERIRHLRSLTRLDLSNNQITILSNYTFANLTKLSTLIIS 798
Query: 165 --------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSW 216
A GL +L ++L+ N ++ LP+G F +L L + + N CDC L W
Sbjct: 799 YNKLQCLQRHALSGLNNLRVVSLHGNRISMLPEGSFEDLKSLTHIALGSNPLYCDCGLKW 858
Query: 217 LHRWLK-RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFH 275
W+K Y G+ +C P +K + IL P F C G R+ I +C+ F
Sbjct: 859 FSDWIKLDYVEPGI-ARCAEPEQMKDKLILSTPSSSFVCRG---RVRNDIL-AKCNACF- 912
Query: 276 PYNSCPVEKP---TGECAAEPSCPHPCRCADG 304
E+P +C A P + C C G
Sbjct: 913 -------EQPCQNQAQCVALPQREYQCLCQPG 937
>gi|383852934|ref|XP_003701980.1| PREDICTED: protein slit-like [Megachile rotundata]
Length = 1466
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 181/449 (40%), Positives = 236/449 (52%), Gaps = 74/449 (16%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
LNNN LT L + + L+TL++ +N+ CDCHL+WL R LK YPRLG +T+C +P H
Sbjct: 177 LNNNRLTTLGKEMLNGMSHLKTLKLVDNALSCDCHLAWLSRHLKTYPRLGQHTRCASPIH 236
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+K +NI D+ EHEFKCSGPV++ EC+AEP CPHPCRCADGIVDCRE L KVP LPE
Sbjct: 237 LKDRNIADLEEHEFKCSGPVQRAGSECSAEPQCPHPCRCADGIVDCRENSLTKVPTHLPE 296
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAF---------------- 168
TTELRLEQN ITE+PPKAF+ Y++L RIDLS NQI KVA DAF
Sbjct: 297 DTTELRLEQNSITEIPPKAFSPYRKLHRIDLSNNQIKKVAADAFHGLKSLETLVLYGNKI 356
Query: 169 --------QGLK------------------------SLTSLTLNNNNLTYLPDGVFAELF 196
QGL LT L+L +NN+ L +G FA L
Sbjct: 357 TELPSGLFQGLSNLHVLLLNANEISCIRTDLFRDLTGLTVLSLYDNNIRSLANGTFANLR 416
Query: 197 RLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
++TL ++EN FICDC+L WL+ +L +P KC P ++ + I I + +FKC G
Sbjct: 417 SIQTLHLAENPFICDCNLRWLNIYLHAHPIETTTAKCELPERLQRRKIDSIRDSKFKCKG 476
Query: 257 SSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKV 316
EE T K GEC CP PC C VDC K L +
Sbjct: 477 D----------EELLT-----------KRAGECILPGECPAPCVCDGATVDCSNKKLTSI 515
Query: 317 PILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYK 376
P LP T+ T ++S + +DK+ K + L +N IT + AF
Sbjct: 516 PKELPIYTS--TLLLSNNELDKIKADGLFE---KLPELQHLDLRRNKITRIEASAFQGAH 570
Query: 377 RLRRIRLEQNDITELPPKAFANYKRLRRM 405
+L + L +N + E+ K F L+ +
Sbjct: 571 KLTNLLLSENRLREVHNKMFTGLTNLKTL 599
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/305 (40%), Positives = 154/305 (50%), Gaps = 78/305 (25%)
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQG-------------- 170
+LRL +N + LP F+N L+R+DLS NQIS + +G
Sbjct: 99 GVEKLRLNKNQLRHLPDLLFSNMMNLKRLDLSHNQISTIGPKTLRGISSLKFLSLDNNLL 158
Query: 171 ----------LKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW 220
LK L L LNNN LT L + + L+TL++ +N+ CDCHL+WL R
Sbjct: 159 TCIDEASIRELKDLEILMLNNNRLTTLGKEMLNGMSHLKTLKLVDNALSCDCHLAWLSRH 218
Query: 221 LKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC 280
LK YPRLG +T+C +P H+K +NI D+ EHEFKCSG
Sbjct: 219 LKTYPRLGQHTRCASPIHLKDRNIADLEEHEFKCSG------------------------ 254
Query: 281 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL 340
PV++ EC+AEP CPHPCRCADGIVDCRE L KVP LPE TTEL
Sbjct: 255 PVQRAGSECSAEPQCPHPCRCADGIVDCRENSLTKVPTHLPEDTTEL------------- 301
Query: 341 LYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYK 400
RLEQN ITE+PPKAF+ Y++L RI L N I ++ AF K
Sbjct: 302 -----------------RLEQNSITEIPPKAFSPYRKLHRIDLSNNQIKKVAADAFHGLK 344
Query: 401 RLRRM 405
L +
Sbjct: 345 SLETL 349
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 132/448 (29%), Positives = 199/448 (44%), Gaps = 74/448 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +NN+ L +G FA L ++TL ++EN FICDC+L WL+ +L +P KC P
Sbjct: 398 SLYDNNIRSLANGTFANLRSIQTLHLAENPFICDCNLRWLNIYLHAHPIETTTAKCELPE 457
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
++ + I I + +FKC G E K GEC CP PC C VDC K L +P
Sbjct: 458 RLQRRKIDSIRDSKFKCKGDEELLTKRAGECILPGECPAPCVCDGATVDCSNKKLTSIPK 517
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--------- 170
LP T+ L L N++ ++ F L+ +DL +N+I+++ AFQG
Sbjct: 518 ELPIYTSTLLLSNNELDKIKADGLFEKLPELQHLDLRRNKITRIEASAFQGAHKLTNLLL 577
Query: 171 ---------------LKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLS 215
L +L +L L+ N +T + G F L LR + + N C+CHL+
Sbjct: 578 SENRLREVHNKMFTGLTNLKTLNLHGNAITCIMQGAFDGLSHLRIINMQGNPLSCNCHLA 637
Query: 216 WLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFH 275
W WL++ + C P +K I DIP HEFKC+ S+
Sbjct: 638 WFAGWLRKRDMSEVVGHCHDPPRLKDATIKDIPHHEFKCNNDSV---------------- 681
Query: 276 PYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL------TY 329
C + CP C CA +V C L ++P +P TTEL
Sbjct: 682 ------------GCLGDDYCPPQCNCAGSVVRCSRSQLTEIPRGIPPETTELYLDVNNIK 729
Query: 330 MVSIDRVD--KVLLYSYISNN---------FKRWTNRSRR-LEQNDITELPPKAFANYKR 377
+ +R++ ++L +SNN F+ T S + N + + A A K
Sbjct: 730 TIQPERLNHLRILTKLDLSNNQIGMLSNDTFRNLTKLSHLIISYNKLQCVQRNALAGLKS 789
Query: 378 LRRIRLEQNDITELPPKAFANYKRLRRM 405
LR + L NDI+ +P AF + K + +
Sbjct: 790 LRIMSLHGNDISVIPEGAFEDLKSMTHL 817
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 145/324 (44%), Gaps = 36/324 (11%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N +T + G F L LR + + N C+CHL+W WL++ + C P
Sbjct: 601 LHGNAITCIMQGAFDGLSHLRIINMQGNPLSCNCHLAWFAGWLRKRDMSEVVGHCHDPPR 660
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+K I DIP HEFKC+ + C + CP C CA +V C L ++P +P
Sbjct: 661 LKDATIKDIPHHEFKCN----NDSVGCLGDDYCPPQCNCAGSVVRCSRSQLTEIPRGIPP 716
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ--------------- 169
TTEL L+ N+I + P+ + + L ++DLS NQI ++ D F+
Sbjct: 717 ETTELYLDVNNIKTIQPERLNHLRILTKLDLSNNQIGMLSNDTFRNLTKLSHLIISYNKL 776
Query: 170 ---------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW 220
GLKSL ++L+ N+++ +P+G F +L + L + N CDC + WL W
Sbjct: 777 QCVQRNALAGLKSLRIMSLHGNDISVIPEGAFEDLKSMTHLALGSNPLYCDCSMRWLAEW 836
Query: 221 LKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC 280
+K+ +C P ++ + +L P F+C + + C T
Sbjct: 837 VKKDFLEAGIARCMEPPAMRDKLLLTTPAVAFQCKTNQQPAEVLAKCDLCYTS------- 889
Query: 281 PVEKPTGECAAEPSCPHPCRCADG 304
P + G C P C+CA G
Sbjct: 890 PCQN-GGFCETLPDRQFRCKCAPG 912
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 40/77 (51%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L+ N+++ +P+G F +L + L + N CDC + WL W+K+ +C P
Sbjct: 794 SLHGNDISVIPEGAFEDLKSMTHLALGSNPLYCDCSMRWLAEWVKKDFLEAGIARCMEPP 853
Query: 64 HIKGQNILDIPEHEFKC 80
++ + +L P F+C
Sbjct: 854 AMRDKLLLTTPAVAFQC 870
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%)
Query: 131 LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDG 190
L+ N+I+ + F + L + LS NQI + AF L + L LN N L +LPD
Sbjct: 57 LQGNNISVIFKTDFEDMATLHVLWLSSNQIHTIERGAFHDLVGVEKLRLNKNQLRHLPDL 116
Query: 191 VFAELFRLRTLRISENSF 208
+F+ + L+ L +S N
Sbjct: 117 LFSNMMNLKRLDLSHNQI 134
>gi|227465|prf||1704200A slit gene
Length = 1480
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 175/451 (38%), Positives = 241/451 (53%), Gaps = 77/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNNLT LP +F L RLR LR+S+N F CDCHLSWL R+L+ RL YT+C +PS
Sbjct: 202 TLNNNNLTSLPHNIFGGLGRLRALRLSDNPFACDCHLSWLSRFLRSATRLAPYTRCQSPS 261
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+KGQN+ D+ + EFKCSG E EC AE SCPHPCRCADGIVDCREK L VP+ LP
Sbjct: 262 QLKGQNVADLHDQEFKCSGLTEHAPMECGAENSCPHPCRCADGIVDCREKSLTSVPVTLP 321
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TT++RLEQN ITELPPK+F++++RLRRIDLS N IS++A DA GLK LT+L L N
Sbjct: 322 DDTTDVRLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNK 381
Query: 184 LTYLPDGVF--------------------AELFR-------------------------- 197
+ LP GVF + FR
Sbjct: 382 IFDLPSGVFKGLGSLRLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAM 441
Query: 198 --LRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDC+L WL +L + P +C +P + + I + E +FKC
Sbjct: 442 KSMKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMHRRRIESLREEKFKCE 501
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
E R K+ +GEC + CP C C VDC + L +
Sbjct: 502 WG--ELRMKL--------------------SGECRMDSDCPAMCHCEGTTVDCTGRRLKE 539
Query: 316 VPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFAN 374
+P +P TTEL + + R+ L+ + + K L++N +T + P AF
Sbjct: 540 IPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVK------LELKRNQLTGIEPNAFEG 593
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ ++L +N I E+ K F +L+ +
Sbjct: 594 ASHIQELQLGENKIKEISNKMFLGLHQLKTL 624
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 133/358 (37%), Positives = 171/358 (47%), Gaps = 102/358 (28%)
Query: 93 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR- 151
E CP C C VDC +GL VP + L L+ N++T + F +LR
Sbjct: 69 TEARCPRVCSCTGLNVDCSHRGLTSVPRKISADVERLELQGNNLTVIYETDFQRLTKLRM 128
Query: 152 -----------------------RIDLSKNQISKVAVDAFQGLKSLTSL----------- 177
R+D+S N I+ V F+G +SL SL
Sbjct: 129 LQLTDNQIHTIERNSFQDLVSLERLDISNNVITTVGRRVFKGAQSLRSLQLDNNQITCLD 188
Query: 178 -------------TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRY 224
TLNNNNLT LP +F L RLR LR+S+N F CDCHLSWL R+L+
Sbjct: 189 EHAFKGLVELEILTLNNNNLTSLPHNIFGGLGRLRALRLSDNPFACDCHLSWLSRFLRSA 248
Query: 225 PRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEK 284
RL YT+C +PS +KGQN+ D+ + EFKCSG + E
Sbjct: 249 TRLAPYTRCQSPSQLKGQNVADLHDQEFKCSGLT------------------------EH 284
Query: 285 PTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSY 344
EC AE SCPHPCRCADGIVDCREK L VP+ LP+ TT++
Sbjct: 285 APMECGAENSCPHPCRCADGIVDCREKSLTSVPVTLPDDTTDV----------------- 327
Query: 345 ISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
RLEQN ITELPPK+F++++RLRRI L N+I+ + A + K+L
Sbjct: 328 -------------RLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQL 372
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 197/446 (44%), Gaps = 76/446 (17%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
+NN+ L +G F + ++T+ +++N FICDC+L WL +L + P +C +P +
Sbjct: 427 DNNIQSLANGTFDAMKSMKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMH 486
Query: 67 GQNILDIPEHEFKCS-GPVE-KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+ I + E +FKC G + K +GEC + CP C C VDC + L ++P +P
Sbjct: 487 RRRIESLREEKFKCEWGELRMKLSGECRMDSDCPAMCHCEGTTVDCTGRRLKEIPRDIPL 546
Query: 125 ATTEL-------------------------RLEQNDITELPPKAFANYKRLRRIDLSKNQ 159
TTEL L++N +T + P AF ++ + L +N+
Sbjct: 547 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 606
Query: 160 ISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
I +++ F GL L +L L +N ++ + G F L L +L ++ N F C+CHL+W
Sbjct: 607 IKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAE 666
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
+++ G +C APS ++ +I D+P EFKCS + E
Sbjct: 667 CVRKKSLNGGAARCGAPSKVRDVDIKDLPHSEFKCSSENSEG------------------ 708
Query: 280 CPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL------------ 327
C + CP C C +V C L ++P +P T+EL
Sbjct: 709 ---------CLGDGYCPPSCTCTGTVVACSRNQLKEIPRGIPAETSELYLESNEIEQIHY 759
Query: 328 ---TYMVSIDRVD-----KVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLR 379
++ S+ R+D +L +Y N + + + + N + L A + LR
Sbjct: 760 ERIRHLRSLTRLDLSNNQITILSNYTFANLTKLS--TLIISYNKLQCLQRHALSGLNNLR 817
Query: 380 RIRLEQNDITELPPKAFANYKRLRRM 405
+ L N I+ LP +F + K L +
Sbjct: 818 VVSLHGNRISMLPEGSFEDLKSLTHI 843
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 154/332 (46%), Gaps = 46/332 (13%)
Query: 3 RTLN--NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCF 60
+TLN +N ++ + G F L L +L ++ N F C+CHL+W +++ G +C
Sbjct: 622 KTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAECVRKKSLNGGAARCG 681
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
APS ++ +I D+P EFKCS E G C + CP C C +V C L ++P
Sbjct: 682 APSKVRDVDIKDLPHSEFKCSS--ENSEG-CLGDGYCPPSCTCTGTVVACSRNQLKEIPR 738
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAV--------------- 165
+P T+EL LE N+I ++ + + + L R+DLS NQI+ ++
Sbjct: 739 GIPAETSELYLESNEIEQIHYERIRHLRSLTRLDLSNNQITILSNYTFANLTKLSTLIIS 798
Query: 166 ---------DAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSW 216
A GL +L ++L+ N ++ LP+G F +L L + + N CDC L W
Sbjct: 799 YNKLQCLQRHALSGLNNLRVVSLHGNRISMLPEGSFEDLKSLTHIALGSNPLYCDCGLKW 858
Query: 217 LHRWLK-RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFH 275
W+K Y G+ +C P +K + IL P F C G R+ I +C+ F
Sbjct: 859 FSDWIKLDYVEPGI-ARCAEPEQMKDKLILSTPSSSFVCRG---RVRNDIL-AKCNACF- 912
Query: 276 PYNSCPVEKP---TGECAAEPSCPHPCRCADG 304
E+P +C A P + C C G
Sbjct: 913 -------EQPCQNQAQCVALPQREYQCLCQPG 937
>gi|195124784|ref|XP_002006867.1| GI21301 [Drosophila mojavensis]
gi|193911935|gb|EDW10802.1| GI21301 [Drosophila mojavensis]
Length = 1529
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 176/451 (39%), Positives = 243/451 (53%), Gaps = 77/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNNLT LP F L +LR LR+S+N F CDCHLSWL R+L+ PRL YT+C +PS
Sbjct: 249 TLNNNNLTALPHNAFGGLGKLRALRLSDNPFACDCHLSWLSRYLRSAPRLAPYTRCQSPS 308
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+KGQN+ D+ + EFKCSG E EC E SCPHPCRCADGIVDCREK L VP+ LP
Sbjct: 309 QLKGQNVADLHDQEFKCSGLTEHAPMECGVENSCPHPCRCADGIVDCREKSLTSVPVTLP 368
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLT-------- 175
+ TTELRLEQN ITELP K+F++++RLRRIDLS N IS++A DA GLK LT
Sbjct: 369 DDTTELRLEQNFITELPAKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNK 428
Query: 176 ----------------SLTLN------------------------NNNLTYLPDGVFAEL 195
L LN +NN+ L +G F +
Sbjct: 429 IKDLPSGVFKGLSSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAM 488
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDC+L WL +L + P +C +P + + I + E +FKCS
Sbjct: 489 KSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMHRRRIESLREEKFKCS 548
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
E R K+ +GEC + CP C+C VDC +GL +
Sbjct: 549 WD--ELRMKL--------------------SGECRMDSDCPSMCQCEGTTVDCAGRGLKE 586
Query: 316 VPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFAN 374
+P +P TTEL + + R++ L+ + + K L++N +T + P AF
Sbjct: 587 IPRDIPLHTTELLLNDNELGRINSDGLFGRLPHLVK------LELKRNQLTGIEPNAFEG 640
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R++ ++L +N I E+ K F +L+ +
Sbjct: 641 ASRIQDLQLGENKIKEISNKMFLGLHQLKTL 671
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/274 (43%), Positives = 151/274 (55%), Gaps = 54/274 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L + N IT + + F + LR + L NQI+ + AF+GL L LTLNNNNLT LP
Sbjct: 200 LDISHNVITTVGRRVFKGAQSLRSLQLDNNQITCMDEHAFKGLLELEILTLNNNNLTALP 259
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F L +LR LR+S+N F CDCHLSWL R+L+ PRL YT+C +PS +KGQN+ D+
Sbjct: 260 HNAFGGLGKLRALRLSDNPFACDCHLSWLSRYLRSAPRLAPYTRCQSPSQLKGQNVADLH 319
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EFKCSG + E EC E SCPHPCRCADGIVDC
Sbjct: 320 DQEFKCSGLT------------------------EHAPMECGVENSCPHPCRCADGIVDC 355
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
REK L VP+ LP+ TTEL RLEQN ITELP
Sbjct: 356 REKSLTSVPVTLPDDTTEL------------------------------RLEQNFITELP 385
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
K+F++++RLRRI L N+I+ + A + K+L
Sbjct: 386 AKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQL 419
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 119/446 (26%), Positives = 200/446 (44%), Gaps = 76/446 (17%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
+NN+ L +G F + ++T+ +++N FICDC+L WL +L + P +C +P +
Sbjct: 474 DNNIQSLANGTFDAMKSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMH 533
Query: 67 GQNILDIPEHEFKCSGPV--EKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+ I + E +FKCS K +GEC + CP C+C VDC +GL ++P +P
Sbjct: 534 RRRIESLREEKFKCSWDELRMKLSGECRMDSDCPSMCQCEGTTVDCAGRGLKEIPRDIPL 593
Query: 125 ATTEL-------------------------RLEQNDITELPPKAFANYKRLRRIDLSKNQ 159
TTEL L++N +T + P AF R++ + L +N+
Sbjct: 594 HTTELLLNDNELGRINSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASRIQDLQLGENK 653
Query: 160 ISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
I +++ F GL L +L L +N ++ + G F L L +L ++ N F C+CHL+W
Sbjct: 654 IKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAE 713
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
WL++ G +C AP+ ++ I D+P +EFKCS + E
Sbjct: 714 WLRKKSLSGGAARCAAPAKVRDVQIKDLPHNEFKCSSDNNEG------------------ 755
Query: 280 CPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL------------ 327
C + CP C C +V C L ++P +P T+EL
Sbjct: 756 ---------CLGDGYCPPACTCTGTVVRCSRNQLKEIPRGIPPETSELYLESNEIEQIHY 806
Query: 328 ---TYMVSIDRVD-----KVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLR 379
++ ++ R+D +L +Y N + + + + N + L A + LR
Sbjct: 807 ERIRHLRALTRLDLSNNQITILSNYTFANLTKLS--TLIISYNKLQCLQRHALSGLNNLR 864
Query: 380 RIRLEQNDITELPPKAFANYKRLRRM 405
+ L N I+ LP +F + K L +
Sbjct: 865 VLSLHGNRISMLPEGSFEDLKSLTHI 890
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 157/332 (47%), Gaps = 46/332 (13%)
Query: 3 RTLN--NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCF 60
+TLN +N ++ + G F L L +L ++ N F C+CHL+W WL++ G +C
Sbjct: 669 KTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLSGGAARCA 728
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
AP+ ++ I D+P +EFKCS + C + CP C C +V C L ++P
Sbjct: 729 APAKVRDVQIKDLPHNEFKCSSDNNEG---CLGDGYCPPACTCTGTVVRCSRNQLKEIPR 785
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAV--------------- 165
+P T+EL LE N+I ++ + + + L R+DLS NQI+ ++
Sbjct: 786 GIPPETSELYLESNEIEQIHYERIRHLRALTRLDLSNNQITILSNYTFANLTKLSTLIIS 845
Query: 166 ---------DAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSW 216
A GL +L L+L+ N ++ LP+G F +L L + + N CDC L W
Sbjct: 846 YNKLQCLQRHALSGLNNLRVLSLHGNRISMLPEGSFEDLKSLTHIALGSNPLYCDCSLKW 905
Query: 217 LHRWLK-RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFH 275
W+K Y G+ +C P H+K + IL P F C G + R++I +
Sbjct: 906 FSDWIKLDYVEPGI-ARCAEPEHMKDKLILSTPSSNFVCRG---KVRNEILAK------- 954
Query: 276 PYNSCPVEKP---TGECAAEPSCPHPCRCADG 304
N+C E+P +C A P + C C G
Sbjct: 955 -CNAC-YEQPCQNKAQCLALPQRDYQCLCQPG 984
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 65/153 (42%), Gaps = 11/153 (7%)
Query: 56 YTKCFAPSHIKGQNILDIPEHEFKCSGPVEKPTGECAA--EPSCPHPCRCADGIVDCREK 113
Y+ F S I + + H P G E CP C C+ VDC +
Sbjct: 62 YSSVFGSSAIASGGLGSVGIH---------IPGGGVGVITEARCPRVCSCSGLTVDCSHR 112
Query: 114 GLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKS 173
GL +VP + L L+ N++T + F +LR + L+ NQI + +A Q L S
Sbjct: 113 GLTQVPRKISADVERLDLQGNNLTVIYETDFQRLTKLRMLQLTDNQIHTIEKNALQDLVS 172
Query: 174 LTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
L L LNNN L +P+ L L IS N
Sbjct: 173 LERLRLNNNRLKAIPENFVTSSASLLRLDISHN 205
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 8/116 (6%)
Query: 291 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFK 350
E CP C C+ VDC +GL +VP + L + + ++Y +F+
Sbjct: 92 TEARCPRVCSCSGLTVDCSHRGLTQVPRKISADVERL----DLQGNNLTVIY---ETDFQ 144
Query: 351 RWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R T R +L N I + A + L R+RL N + +P + L R+
Sbjct: 145 RLTKLRMLQLTDNQIHTIEKNALQDLVSLERLRLNNNRLKAIPENFVTSSASLLRL 200
>gi|242017207|ref|XP_002429083.1| slit protein, putative [Pediculus humanus corporis]
gi|212513947|gb|EEB16345.1| slit protein, putative [Pediculus humanus corporis]
Length = 1471
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 175/452 (38%), Positives = 246/452 (54%), Gaps = 79/452 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNNLT + G+F E LR+LR+SENS ICDCHL+WL RWL++ P+L YTKCF+P+
Sbjct: 208 TLNNNNLTSIGKGMF-EGLSLRSLRLSENSLICDCHLTWLARWLRKSPKLAPYTKCFSPN 266
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+KG N+ D+ + EF+CS VE+P+GEC AE CPHPCRC++GIVDCR+K L K+P LP
Sbjct: 267 QLKGHNVADLHDQEFRCSSLVERPSGECEAEQECPHPCRCSEGIVDCRDKALTKIPDTLP 326
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLT-------- 175
E TELRLEQN I E+P KAF Y RLRRIDLS N+ISK+A DAFQG+KSLT
Sbjct: 327 EGMTELRLEQNQIIEIPSKAFTPYTRLRRIDLSNNKISKIASDAFQGVKSLTSLVLYGNK 386
Query: 176 ----------------S------------------------LTLNNNNLTYLPDGVFAEL 195
L+L +NN+ L +G F L
Sbjct: 387 ISDLPHGVFHGLTSLQLLLLNANEISCIRKDSFKDLHNVNLLSLYDNNILSLANGTFDSL 446
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE-FKC 254
++TL + +N FICDC+L WL ++LK+ P +C P + G+ D+ + + FKC
Sbjct: 447 KNVQTLHLGKNPFICDCNLRWLIQYLKKNPVERSGARCETPKRM-GRKKFDLTKDDRFKC 505
Query: 255 SGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLN 314
G+ EE T + G+C + +CP C C VDC +GL
Sbjct: 506 KGT----------EEFRTRY-----------AGDCVIDSACPVGCSCDGTTVDCGGRGLT 544
Query: 315 KVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFA 373
++P +P+ TT+L + I ++ L+ + N K +N I + P +F
Sbjct: 545 EIPKDIPKYTTDLLLNDNEITKIKSDGLFGRLPNLVK------LDFRRNKINGIEPNSFE 598
Query: 374 NYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++L + L +N + E+ K F L+++
Sbjct: 599 GAEKLSELLLSENKLGEIHNKMFLGLHNLKKL 630
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 135/381 (35%), Positives = 172/381 (45%), Gaps = 127/381 (33%)
Query: 97 CPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDIT------------------- 137
CP C CA +DC GL +VP +LP +L L+ N+IT
Sbjct: 55 CPWACSCAGLAIDCSHHGLTQVPQILPSDAEKLDLQGNNITIIFETDFKNMGNLKVLNLH 114
Query: 138 -----------------------------ELPPKAFANYKRLRRIDLSKNQISKVAVDAF 168
+P F N L R+DLS NQ+ V F
Sbjct: 115 DNRIHTIDRGAFHDLISLERLRLSTNNLKHVPDFLFGNLPNLHRLDLSHNQLEVVGKKTF 174
Query: 169 QG------------------------LKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRIS 204
+G L+ L LTLNNNNLT + G+F E LR+LR+S
Sbjct: 175 KGCSQLKVLQLDNNKLTCIDETAINELQDLEVLTLNNNNLTSIGKGMF-EGLSLRSLRLS 233
Query: 205 ENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSK 264
ENS ICDCHL+WL RWL++ P+L YTKCF+P+ +KG N+ D+ + EF+CS
Sbjct: 234 ENSLICDCHLTWLARWLRKSPKLAPYTKCFSPNQLKGHNVADLHDQEFRCSS-------- 285
Query: 265 IYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEAT 324
VE+P+GEC AE CPHPCRC++GIVDCR+K L K+P LPE
Sbjct: 286 ----------------LVERPSGECEAEQECPHPCRCSEGIVDCRDKALTKIPDTLPEGM 329
Query: 325 TELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLE 384
TEL RLEQN I E+P KAF Y RLRRI L
Sbjct: 330 TEL------------------------------RLEQNQIIEIPSKAFTPYTRLRRIDLS 359
Query: 385 QNDITELPPKAFANYKRLRRM 405
N I+++ AF K L +
Sbjct: 360 NNKISKIASDAFQGVKSLTSL 380
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 202/451 (44%), Gaps = 79/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +NN+ L +G F L ++TL + +N FICDC+L WL ++LK+ P +C P
Sbjct: 429 SLYDNNILSLANGTFDSLKNVQTLHLGKNPFICDCNLRWLIQYLKKNPVERSGARCETPK 488
Query: 64 HIKGQNILDIPEHE-FKCSGPVEKPT---GECAAEPSCPHPCRCADGIVDCREKGLNKVP 119
+ G+ D+ + + FKC G E T G+C + +CP C C VDC +GL ++P
Sbjct: 489 RM-GRKKFDLTKDDRFKCKGTEEFRTRYAGDCVIDSACPVGCSCDGTTVDCGGRGLTEIP 547
Query: 120 ILLPEATTELRLEQNDITELP-------------------------PKAFANYKRLRRID 154
+P+ TT+L L N+IT++ P +F ++L +
Sbjct: 548 KDIPKYTTDLLLNDNEITKIKSDGLFGRLPNLVKLDFRRNKINGIEPNSFEGAEKLSELL 607
Query: 155 LSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHL 214
LS+N++ ++ F GL +L L+L N ++ + G F L L+TL + N F C+CHL
Sbjct: 608 LSENKLGEIHNKMFLGLHNLKKLSLYENEISCVMPGSFNSLMNLKTLNLLSNPFYCNCHL 667
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDF 274
+W WL+R +C P H+K I ++ ++FKC G +
Sbjct: 668 AWFADWLRRRQLSAANPRCGGPDHLKDTLIQELSHNDFKCVGDQDQG------------- 714
Query: 275 HPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTE-------- 326
C + CP C C +V C L ++P +P T+E
Sbjct: 715 --------------CLGDSYCPPKCSCTGTVVRCTRAKLKEIPRGIPPDTSELYLDVNEI 760
Query: 327 ----------LTYMVSIDRVDKVL--LYSYISNNFKRWTNRSRRLEQNDITELPPKAFAN 374
L Y+ +D + + L +Y N R + + + N I + AF+
Sbjct: 761 QSVQIPRIHHLKYLTKLDLSNNQISVLSNYTFANLTRLS--TLIITYNKIQCVEVHAFSG 818
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
K LR + L NDI++L + FA+ + + +
Sbjct: 819 LKSLRIVSLHGNDISQLHNETFADLESITHL 849
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 135/276 (48%), Gaps = 29/276 (10%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L N ++ + G F L L+TL + N F C+CHL+W WL+R +C P
Sbjct: 631 SLYENEISCVMPGSFNSLMNLKTLNLLSNPFYCNCHLAWFADWLRRRQLSAANPRCGGPD 690
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H+K I ++ ++FKC G ++ C + CP C C +V C L ++P +P
Sbjct: 691 HLKDTLIQELSHNDFKCVGDQDQG---CLGDSYCPPKCSCTGTVVRCTRAKLKEIPRGIP 747
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISK--------------------- 162
T+EL L+ N+I + + K L ++DLS NQIS
Sbjct: 748 PDTSELYLDVNEIQSVQIPRIHHLKYLTKLDLSNNQISVLSNYTFANLTRLSTLIITYNK 807
Query: 163 ---VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
V V AF GLKSL ++L+ N+++ L + FA+L + L + +N F CDC+L WL
Sbjct: 808 IQCVEVHAFSGLKSLRIVSLHGNDISQLHNETFADLESITHLALGDNPFYCDCNLRWLAE 867
Query: 220 WLKR-YPRLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
W+K Y G+ C P +KG+ +L P F+C
Sbjct: 868 WVKSDYVEPGV-AFCAEPISLKGKLLLTTPSSAFQC 902
>gi|170036234|ref|XP_001845970.1| slit protein [Culex quinquefasciatus]
gi|167878768|gb|EDS42151.1| slit protein [Culex quinquefasciatus]
Length = 1448
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 178/451 (39%), Positives = 239/451 (52%), Gaps = 77/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L +F + RLR LR+SEN F CDCHLSWL R+LK PRL YT+C +PS
Sbjct: 167 TLNNNNITTLARDMFTGMPRLRALRLSENPFACDCHLSWLARYLKNAPRLAPYTRCHSPS 226
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+KGQN+ D+ + EFKCSG E EC CPHPCRCADGIVDCREK L VP LP
Sbjct: 227 QLKGQNVADLHDQEFKCSGLTENAPMECGGRSLCPHPCRCADGIVDCREKSLTSVPATLP 286
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLT-------- 175
E TTELRLEQN ITE+PPKAFA ++RL+RIDLS N IS+VA DAF GLKSLT
Sbjct: 287 EDTTELRLEQNYITEIPPKAFAAHRRLKRIDLSNNNISRVAYDAFSGLKSLTSLVLYGNK 346
Query: 176 ----------------S------------------------LTLNNNNLTYLPDGVFAEL 195
L+L +NN+ L +G F L
Sbjct: 347 IKDLPASVFKGLTSLQLLLLNANEITCVRKDAFKDLQNLSLLSLYDNNIQTLANGTFDAL 406
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL ++ N FICDC+L WL +L + P +C +P ++ + I + + +FKC+
Sbjct: 407 KSIQTLHLARNPFICDCNLRWLGDYLHQNPIETSGARCDSPKRMQRRRIEALKDEKFKCT 466
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
E +KI K GEC + CP C C VDC +GL +
Sbjct: 467 ----EDHAKI------------------KYAGECRMDQECPAACHCDRTTVDCSSRGLKE 504
Query: 316 VPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFAN 374
+P +P TTEL + ++R+ L+ + N K L +N I+ + P AF
Sbjct: 505 IPRDIPLYTTELLLNDNELNRIRSDGLFGRLPNLVK------LDLRRNQISAVEPNAFEG 558
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+++ + + +N I E+ K F +L+ +
Sbjct: 559 ATKIQELFISENKIPEVHNKMFLGLHQLKTL 589
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 123/287 (42%), Positives = 152/287 (52%), Gaps = 56/287 (19%)
Query: 121 LLPEATTELRLE--QNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLT 178
L A LRL+ N + +P +AF LR + L NQI+ + A +GL L LT
Sbjct: 108 FLSSAANLLRLDLSHNALAAIPKRAFKGATSLRSLQLDNNQITCLDEQAIKGLAELEILT 167
Query: 179 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 238
LNNNN+T L +F + RLR LR+SEN F CDCHLSWL R+LK PRL YT+C +PS
Sbjct: 168 LNNNNITTLARDMFTGMPRLRALRLSENPFACDCHLSWLARYLKNAPRLAPYTRCHSPSQ 227
Query: 239 IKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHP 298
+KGQN+ D+ + EFKCSG + E EC CPHP
Sbjct: 228 LKGQNVADLHDQEFKCSGLT------------------------ENAPMECGGRSLCPHP 263
Query: 299 CRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRR 358
CRCADGIVDCREK L VP LPE TTEL R
Sbjct: 264 CRCADGIVDCREKSLTSVPATLPEDTTEL------------------------------R 293
Query: 359 LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
LEQN ITE+PPKAFA ++RL+RI L N+I+ + AF+ K L +
Sbjct: 294 LEQNYITEIPPKAFAAHRRLKRIDLSNNNISRVAYDAFSGLKSLTSL 340
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 122/447 (27%), Positives = 200/447 (44%), Gaps = 72/447 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +NN+ L +G F L ++TL ++ N FICDC+L WL +L + P +C +P
Sbjct: 389 SLYDNNIQTLANGTFDALKSIQTLHLARNPFICDCNLRWLGDYLHQNPIETSGARCDSPK 448
Query: 64 HIKGQNILDIPEHEFKCSGPVEKP--TGECAAEPSCPHPCRCADGIVDCREKGLNKVPIL 121
++ + I + + +FKC+ K GEC + CP C C VDC +GL ++P
Sbjct: 449 RMQRRRIEALKDEKFKCTEDHAKIKYAGECRMDQECPAACHCDRTTVDCSSRGLKEIPRD 508
Query: 122 LPEATTELRLEQND-------------------------ITELPPKAFANYKRLRRIDLS 156
+P TTEL L N+ I+ + P AF +++ + +S
Sbjct: 509 IPLYTTELLLNDNELNRIRSDGLFGRLPNLVKLDLRRNQISAVEPNAFEGATKIQELFIS 568
Query: 157 KNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSW 216
+N+I +V F GL L +L+L +N +T + G F L L L ++ N F C+CHL W
Sbjct: 569 ENKIPEVHNKMFLGLHQLKTLSLYDNLITCVMPGSFEFLSSLTQLNLASNPFRCNCHLGW 628
Query: 217 LHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHP 276
WL++ G +C +P+ ++ + D+P EFKC+ + +
Sbjct: 629 FSDWLRKKQLGGPPARCASPAKVRDVPVKDLPHFEFKCTSDADQG--------------- 673
Query: 277 YNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL------TYM 330
C E CP C C +V C L ++P +P TTEL M
Sbjct: 674 ------------CLGEGYCPPSCTCTGTVVRCSRNKLKEIPKSIPSETTELYLESNEISM 721
Query: 331 VSIDRVD--KVLLYSYISNN------FKRWTNRSRR----LEQNDITELPPKAFANYKRL 378
+ + R+ K L +SNN + N SR + N++ + A A K L
Sbjct: 722 IQMSRISHLKALTRLDLSNNKISMLSNHTFANLSRLSTLIISYNNLQCVQQYALAGLKNL 781
Query: 379 RRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L N I+ +P +FA+ + + +
Sbjct: 782 KVLSLHGNHISMIPDGSFADLQAITHI 808
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 138/278 (49%), Gaps = 29/278 (10%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L L ++ N F C+CHL W WL++ G +C +P+
Sbjct: 590 SLYDNLITCVMPGSFEFLSSLTQLNLASNPFRCNCHLGWFSDWLRKKQLGGPPARCASPA 649
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+P EFKC+ ++ C E CP C C +V C L ++P +P
Sbjct: 650 KVRDVPVKDLPHFEFKCTSDADQG---CLGEGYCPPSCTCTGTVVRCSRNKLKEIPKSIP 706
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TTEL LE N+I+ + ++ K L R+DLS N+IS ++ F
Sbjct: 707 SETTELYLESNEISMIQMSRISHLKALTRLDLSNNKISMLSNHTFANLSRLSTLIISYNN 766
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLK+L L+L+ N+++ +PDG FA+L + + + N CDC L WL
Sbjct: 767 LQCVQQYALAGLKNLKVLSLHGNHISMIPDGSFADLQAITHIALGSNPLYCDCSLKWLSE 826
Query: 220 WLKR-YPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+KR Y G+ +C P +K + +L P +F C G
Sbjct: 827 WVKRDYVEPGI-ARCAEPDAMKDKLVLSTPAAQFVCKG 863
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L+ N+IT + F + +LR + L+ NQI + DA L SL L LN+N L +P
Sbjct: 46 LDLQGNNITVIYESDFQSLSKLRILQLTDNQIYTIEKDALLDLISLERLRLNSNRLKSIP 105
Query: 189 DGVFAELFRLRTLRISENSF 208
D + L L +S N+
Sbjct: 106 DNFLSSAANLLRLDLSHNAL 125
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%)
Query: 139 LPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRL 198
L K FAN+K+ +DL N I+ + FQ L L L L +N + + +L L
Sbjct: 32 LELKLFANHKKKDTLDLQGNNITVIYESDFQSLSKLRILQLTDNQIYTIEKDALLDLISL 91
Query: 199 RTLRISEN 206
LR++ N
Sbjct: 92 ERLRLNSN 99
>gi|380015073|ref|XP_003691536.1| PREDICTED: protein slit-like [Apis florea]
Length = 1347
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 180/449 (40%), Positives = 233/449 (51%), Gaps = 74/449 (16%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
LNNN LT L + LRTL++ +N CDCHL+WL R LK YPRLG +TKC +P H
Sbjct: 57 LNNNKLTTLGKEMLNGFSHLRTLKLVDNPLSCDCHLAWLSRHLKSYPRLGQHTKCASPIH 116
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+K +NI D+ EHEFKCSGPVE+ EC+AEP CPHPCRCADGIVDCRE L KVP LPE
Sbjct: 117 LKDRNIADVQEHEFKCSGPVERTGSECSAEPQCPHPCRCADGIVDCRENSLTKVPTHLPE 176
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLK------------ 172
TTELRLEQN ITE+PPKAF+ Y++LRRIDLS NQI KVA DAF GLK
Sbjct: 177 DTTELRLEQNRITEIPPKAFSPYRKLRRIDLSNNQIKKVAADAFHGLKSLESLVLYGNKI 236
Query: 173 ------------SLTSLTLN------------------------NNNLTYLPDGVFAELF 196
+L L LN +NN+ L +G FA L
Sbjct: 237 TELPSGLFQGLTNLQLLLLNANEISCIRTDLFRDLTSLTLLSLYDNNIRSLANGTFANLR 296
Query: 197 RLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
+ TL ++ N FICDC+L WL+ +L +P KC +P + + I + + +FKC G
Sbjct: 297 SIETLHLARNPFICDCNLRWLNAYLHAHPIETSGAKCESPKRAQKRKIDSMRDDKFKCKG 356
Query: 257 SSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKV 316
EE T K GEC CP PC C VDC K L +
Sbjct: 357 D----------EELLT-----------KRAGECILPGECPDPCVCNGATVDCSNKKLTSI 395
Query: 317 PILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYK 376
P LP T+ T +++ + +DK+ K + L +N I+ + +F
Sbjct: 396 PKELPIYTS--TLLLANNELDKIKADGLFE---KLPELQHLDLRKNKISRIEASSFQGAH 450
Query: 377 RLRRIRLEQNDITELPPKAFANYKRLRRM 405
+L + L +N + E+ K F L+ +
Sbjct: 451 KLTDLLLSENRLREVHNKMFTGLTNLKTL 479
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 118/281 (41%), Positives = 146/281 (51%), Gaps = 54/281 (19%)
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL 184
A+ L L N I + PK L+ + L N ++ + + + LK L L LNNN L
Sbjct: 3 ASVRLDLSHNQIATIGPKTLRGISSLKYLLLDNNVLTCIDEASIRELKDLEILMLNNNKL 62
Query: 185 TYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNI 244
T L + LRTL++ +N CDCHL+WL R LK YPRLG +TKC +P H+K +NI
Sbjct: 63 TTLGKEMLNGFSHLRTLKLVDNPLSCDCHLAWLSRHLKSYPRLGQHTKCASPIHLKDRNI 122
Query: 245 LDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADG 304
D+ EHEFKCSG PVE+ EC+AEP CPHPCRCADG
Sbjct: 123 ADVQEHEFKCSG------------------------PVERTGSECSAEPQCPHPCRCADG 158
Query: 305 IVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDI 364
IVDCRE L KVP LPE TTEL RLEQN I
Sbjct: 159 IVDCRENSLTKVPTHLPEDTTEL------------------------------RLEQNRI 188
Query: 365 TELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
TE+PPKAF+ Y++LRRI L N I ++ AF K L +
Sbjct: 189 TEIPPKAFSPYRKLRRIDLSNNQIKKVAADAFHGLKSLESL 229
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 130/447 (29%), Positives = 198/447 (44%), Gaps = 76/447 (17%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
+NN+ L +G FA L + TL ++ N FICDC+L WL+ +L +P KC +P +
Sbjct: 281 DNNIRSLANGTFANLRSIETLHLARNPFICDCNLRWLNAYLHAHPIETSGAKCESPKRAQ 340
Query: 67 GQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+ I + + +FKC G E K GEC CP PC C VDC K L +P LP
Sbjct: 341 KRKIDSMRDDKFKCKGDEELLTKRAGECILPGECPDPCVCNGATVDCSNKKLTSIPKELP 400
Query: 124 EATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQ------------- 169
T+ L L N++ ++ F L+ +DL KN+IS++ +FQ
Sbjct: 401 IYTSTLLLANNELDKIKADGLFEKLPELQHLDLRKNKISRIEASSFQGAHKLTDLLLSEN 460
Query: 170 -----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLH 218
GL +L +L L+ N +T + G F L +RT+ + N C+CHL+W
Sbjct: 461 RLREVHNKMFTGLTNLKTLNLHGNAITCVMQGSFDGLTHIRTINMQGNPLSCNCHLAWFA 520
Query: 219 RWLKR--YPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHP 276
WL++ P G+ C P +K + DIP HEFKC+ S+
Sbjct: 521 GWLRKRETPLSGVVGHCHDPPRLKDAIVKDIPHHEFKCNNDSV----------------- 563
Query: 277 YNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL------TYM 330
C + CP C CA +V C L ++P +P TTEL
Sbjct: 564 -----------GCLGDDYCPPQCNCAGSVVRCSRSQLTEIPRGIPPETTELYLDVNDIKT 612
Query: 331 VSIDRVD--KVLLYSYISNN---------FKRWTNRSRR-LEQNDITELPPKAFANYKRL 378
+ +R++ ++L +SNN F+ T S + N + + A A K L
Sbjct: 613 IQPERLNHLRILTRLDLSNNQIGMLSNDTFRNLTKLSHLIISYNKLQCVQRNALAGLKSL 672
Query: 379 RRIRLEQNDITELPPKAFANYKRLRRM 405
R + L NDI+ +P AF + + + +
Sbjct: 673 RIMSLHGNDISVIPEGAFEDLQSITHL 699
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 152/327 (46%), Gaps = 40/327 (12%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKR--YPRLGLYTKCFAP 62
L+ N +T + G F L +RT+ + N C+CHL+W WL++ P G+ C P
Sbjct: 481 LHGNAITCVMQGSFDGLTHIRTINMQGNPLSCNCHLAWFAGWLRKRETPLSGVVGHCHDP 540
Query: 63 SHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILL 122
+K + DIP HEFKC+ + C + CP C CA +V C L ++P +
Sbjct: 541 PRLKDAIVKDIPHHEFKCN----NDSVGCLGDDYCPPQCNCAGSVVRCSRSQLTEIPRGI 596
Query: 123 PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ------------- 169
P TTEL L+ NDI + P+ + + L R+DLS NQI ++ D F+
Sbjct: 597 PPETTELYLDVNDIKTIQPERLNHLRILTRLDLSNNQIGMLSNDTFRNLTKLSHLIISYN 656
Query: 170 -----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLH 218
GLKSL ++L+ N+++ +P+G F +L + L + N CDC + WL
Sbjct: 657 KLQCVQRNALAGLKSLRIMSLHGNDISVIPEGAFEDLQSITHLALGSNPLYCDCSMRWLA 716
Query: 219 RWLKR-YPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPY 277
W+K+ Y G+ +C P ++ + +L P F+C + + C T
Sbjct: 717 EWVKKDYVEAGI-ARCMEPPAMRDKLLLTTPATAFQCKTNQQPAEVLAKCDLCYTS---- 771
Query: 278 NSCPVEKPTGECAAEPSCPHPCRCADG 304
P + G C A P C+CA G
Sbjct: 772 ---PCQN-GGFCEALPDRKFRCKCAPG 794
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 18/120 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKR-YPRLGLYTKCFAP 62
+L+ N+++ +P+G F +L + L + N CDC + WL W+K+ Y G+ +C P
Sbjct: 676 SLHGNDISVIPEGAFEDLQSITHLALGSNPLYCDCSMRWLAEWVKKDYVEAGI-ARCMEP 734
Query: 63 SHIKGQNILDIPEHEFKC---SGPVE-------------KPTGECAAEPSCPHPCRCADG 106
++ + +L P F+C P E + G C A P C+CA G
Sbjct: 735 PAMRDKLLLTTPATAFQCKTNQQPAEVLAKCDLCYTSPCQNGGFCEALPDRKFRCKCAPG 794
>gi|345482524|ref|XP_001608177.2| PREDICTED: protein slit-like [Nasonia vitripennis]
Length = 1495
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 173/450 (38%), Positives = 231/450 (51%), Gaps = 74/450 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNN LT L +F L LR L++S+NSF+CDCHL WL R LK + RLG T+C +P+
Sbjct: 203 TLNNNKLTTLGKDIFTGLVHLRNLKLSDNSFMCDCHLMWLSRTLKTFSRLGQNTRCSSPA 262
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H+KG+N++D+ E +FKCSG VEKP+ EC+ EP CPHPCRCADGIVDCRE L KVP LP
Sbjct: 263 HLKGKNLVDLQEQDFKCSGLVEKPSSECSTEPQCPHPCRCADGIVDCRENSLTKVPTYLP 322
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLK----------- 172
E T ELRLEQN ITE+P KAF Y++LRRIDLS N+I KVA DAF GLK
Sbjct: 323 EDTVELRLEQNGITEIPAKAFFPYRKLRRIDLSNNKIRKVAADAFHGLKFLESLVLYGNK 382
Query: 173 -------------------------------------SLTSLTLNNNNLTYLPDGVFAEL 195
LT L+L +NN+ L +G FA L
Sbjct: 383 ISELPSGIFQGLTNLQLLLLNANEISCIRTDLFHDLTGLTLLSLYDNNIKSLSNGTFANL 442
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL ++ N FICDC+L WL +L + P +C +P + I ++ + +FKC
Sbjct: 443 RNIKTLHLARNPFICDCNLRWLSEYLHKNPIETSGARCESPKRTIKRRIDNMRDEKFKCK 502
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
G EE T K GEC CP C C +DC L
Sbjct: 503 GD----------EEVLT-----------KRAGECILPGPCPSSCTCNGATIDCSNGKLTS 541
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANY 375
+P LP T+ L +++ + ++K+ K + L N I+ + AF
Sbjct: 542 IPKDLPVYTSIL--LLANNAIEKIKAEGIFE---KLPELQHLDLRANKISRIEASAFEGA 596
Query: 376 KRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+L + L N + E+ K F L+ +
Sbjct: 597 HKLTDLVLSDNKLREVHTKMFGGLTSLKNL 626
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/301 (41%), Positives = 153/301 (50%), Gaps = 78/301 (25%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQG------------------ 170
LRL N I LP F+N L+R+DLS NQI+ + +G
Sbjct: 130 LRLNNNHIRFLPDLLFSNMMNLKRLDLSHNQITMIGPKTLRGIVSLKHLLLDDNELSCID 189
Query: 171 ------LKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRY 224
LK L LTLNNN LT L +F L LR L++S+NSF+CDCHL WL R LK +
Sbjct: 190 EAAIRELKELEILTLNNNKLTTLGKDIFTGLVHLRNLKLSDNSFMCDCHLMWLSRTLKTF 249
Query: 225 PRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEK 284
RLG T+C +P+H+KG+N++D+ E +FKCSG VEK
Sbjct: 250 SRLGQNTRCSSPAHLKGKNLVDLQEQDFKCSGL------------------------VEK 285
Query: 285 PTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSY 344
P+ EC+ EP CPHPCRCADGIVDCRE L KVP LPE T EL
Sbjct: 286 PSSECSTEPQCPHPCRCADGIVDCRENSLTKVPTYLPEDTVEL----------------- 328
Query: 345 ISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRR 404
RLEQN ITE+P KAF Y++LRRI L N I ++ AF K L
Sbjct: 329 -------------RLEQNGITEIPAKAFFPYRKLRRIDLSNNKIRKVAADAFHGLKFLES 375
Query: 405 M 405
+
Sbjct: 376 L 376
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 128/448 (28%), Positives = 192/448 (42%), Gaps = 74/448 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +NN+ L +G FA L ++TL ++ N FICDC+L WL +L + P +C +P
Sbjct: 425 SLYDNNIKSLSNGTFANLRNIKTLHLARNPFICDCNLRWLSEYLHKNPIETSGARCESPK 484
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ I ++ + +FKC G E K GEC CP C C +DC L +P
Sbjct: 485 RTIKRRIDNMRDEKFKCKGDEEVLTKRAGECILPGPCPSSCTCNGATIDCSNGKLTSIPK 544
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--------- 170
LP T+ L L N I ++ + F L+ +DL N+IS++ AF+G
Sbjct: 545 DLPVYTSILLLANNAIEKIKAEGIFEKLPELQHLDLRANKISRIEASAFEGAHKLTDLVL 604
Query: 171 ---------------LKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLS 215
L SL +L L+ N +T + G F L L ++ I N C+CHL+
Sbjct: 605 SDNKLREVHTKMFGGLTSLKNLNLHGNAITCMMPGSFDNLPHLHSINIQGNPLSCNCHLA 664
Query: 216 WLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFH 275
W WLK+ + C P +K I DIP HEFKC+ S+
Sbjct: 665 WFAEWLKKRDSTSVSGHCHDPPRLKAAAISDIPRHEFKCNSDSV---------------- 708
Query: 276 PYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDR 335
C + CP C CA +V C L ++P +P TTEL V+ +
Sbjct: 709 ------------GCLGDDYCPPQCSCAGSVVRCSRSRLTEIPRGIPPETTELYLDVNDIK 756
Query: 336 VDK--------VLLYSYISNN---------FKRWTNRSRR-LEQNDITELPPKAFANYKR 377
+ +L +SNN F+ T + + N + + A A K
Sbjct: 757 TIQPERLAHLSILTRLDLSNNQIGMLSNDTFRNLTKLAHLIISYNKLQCVQRGALAGLKS 816
Query: 378 LRRIRLEQNDITELPPKAFANYKRLRRM 405
LR + L NDI+ +P AF + K + +
Sbjct: 817 LRILSLHGNDISVIPEGAFEDLKSVTHV 844
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 150/324 (46%), Gaps = 36/324 (11%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N +T + G F L L ++ I N C+CHL+W WLK+ + C P
Sbjct: 628 LHGNAITCMMPGSFDNLPHLHSINIQGNPLSCNCHLAWFAEWLKKRDSTSVSGHCHDPPR 687
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+K I DIP HEFKC+ + C + CP C CA +V C L ++P +P
Sbjct: 688 LKAAAISDIPRHEFKCN----SDSVGCLGDDYCPPQCSCAGSVVRCSRSRLTEIPRGIPP 743
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ--------------- 169
TTEL L+ NDI + P+ A+ L R+DLS NQI ++ D F+
Sbjct: 744 ETTELYLDVNDIKTIQPERLAHLSILTRLDLSNNQIGMLSNDTFRNLTKLAHLIISYNKL 803
Query: 170 ---------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW 220
GLKSL L+L+ N+++ +P+G F +L + + + N CDC++ WL W
Sbjct: 804 QCVQRGALAGLKSLRILSLHGNDISVIPEGAFEDLKSVTHVALGSNPLYCDCNMRWLADW 863
Query: 221 LKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC 280
+KR +C P+ +K + +L P F+C ++K E + +
Sbjct: 864 VKRDFMEPGIARCAEPASMKDKLLLTTPASSFQC-------KTKQQPAEVLAKCNVCYTT 916
Query: 281 PVEKPTGECAAEPSCPHPCRCADG 304
P + G C A P C+CA G
Sbjct: 917 PCQN-GGLCEALPHKQFRCKCAPG 939
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 16/119 (13%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L+ N+++ +P+G F +L + + + N CDC++ WL W+KR +C P+
Sbjct: 821 SLHGNDISVIPEGAFEDLKSVTHVALGSNPLYCDCNMRWLADWVKRDFMEPGIARCAEPA 880
Query: 64 HIKGQNILDIPEHEFKC---SGPVE-------------KPTGECAAEPSCPHPCRCADG 106
+K + +L P F+C P E + G C A P C+CA G
Sbjct: 881 SMKDKLLLTTPASSFQCKTKQQPAEVLAKCNVCYTTPCQNGGLCEALPHKQFRCKCAPG 939
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 20/131 (15%)
Query: 295 CPHPCRCADGIVDCREKGLNKVPILLPEAT---------TELTYMVSIDRVDKVLL-YSY 344
CP C C +DC ++GL +VP L T ++ + D D L
Sbjct: 48 CPWACNCGGQELDCAQRGLTQVPGNLAALTLAEKLDLQGNNISVVFKTDFEDMATLRLLQ 107
Query: 345 ISNN---------FKRWTNRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPK 394
+SNN F+ + R RL N I LP F+N L+R+ L N IT + PK
Sbjct: 108 LSNNQIHTIERGAFQDLVSVERLRLNNNHIRFLPDLLFSNMMNLKRLDLSHNQITMIGPK 167
Query: 395 AFANYKRLRRM 405
L+ +
Sbjct: 168 TLRGIVSLKHL 178
>gi|328780913|ref|XP_392489.4| PREDICTED: protein slit [Apis mellifera]
Length = 1447
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 180/449 (40%), Positives = 233/449 (51%), Gaps = 74/449 (16%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
LNNN LT L + LRTL++ +N CDCHL+WL R LK YPRLG +TKC +P H
Sbjct: 158 LNNNKLTTLGKEMLNGFSHLRTLKLVDNPLSCDCHLAWLSRHLKSYPRLGQHTKCASPIH 217
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+K +NI D+ EHEFKCSGPVE+ EC+AEP CPHPCRCADGIVDCRE L KVP LPE
Sbjct: 218 LKDRNIADVQEHEFKCSGPVERTGSECSAEPQCPHPCRCADGIVDCRENSLTKVPTHLPE 277
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLK------------ 172
TTELRLEQN ITE+PPKAF+ Y++LRRIDLS NQI KVA DAF GLK
Sbjct: 278 DTTELRLEQNRITEIPPKAFSPYRKLRRIDLSNNQIKKVAADAFHGLKSLESLVLYGNKI 337
Query: 173 ------------SLTSLTLN------------------------NNNLTYLPDGVFAELF 196
+L L LN +NN+ L +G FA L
Sbjct: 338 TELPSGLFQGLTNLQLLLLNANEISCIRTDLFRDLTSLTLLSLYDNNIRSLANGTFANLR 397
Query: 197 RLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
+ TL ++ N FICDC+L WL+ +L +P KC +P + + I + + +FKC G
Sbjct: 398 SIETLHLARNPFICDCNLRWLNAYLHAHPIETSGAKCESPKRAQKRKIDSMRDDKFKCKG 457
Query: 257 SSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKV 316
EE T K GEC CP PC C VDC K L +
Sbjct: 458 D----------EELLT-----------KRAGECILPGECPDPCVCNGATVDCSNKKLTSI 496
Query: 317 PILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYK 376
P LP T+ T +++ + +DK+ K + L +N I+ + +F
Sbjct: 497 PKELPIYTS--TLLLANNELDKIKADGLFE---KLPELQHLDLRKNKISRIEASSFQGAH 551
Query: 377 RLRRIRLEQNDITELPPKAFANYKRLRRM 405
+L + L +N + E+ K F L+ +
Sbjct: 552 KLTDLLLSENRLREVHNKMFTGLTNLKTL 580
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 126/305 (41%), Positives = 152/305 (49%), Gaps = 78/305 (25%)
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQG-------------- 170
+LRL N I LP F+N L+R+DLS NQI+ + +G
Sbjct: 80 GVEKLRLNNNQIRHLPDLLFSNMMNLKRLDLSHNQIATIGPKTLRGISSLKYLLLDNNVL 139
Query: 171 ----------LKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW 220
LK L L LNNN LT L + LRTL++ +N CDCHL+WL R
Sbjct: 140 TCIDEASIRELKDLEILMLNNNKLTTLGKEMLNGFSHLRTLKLVDNPLSCDCHLAWLSRH 199
Query: 221 LKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC 280
LK YPRLG +TKC +P H+K +NI D+ EHEFKCSG
Sbjct: 200 LKSYPRLGQHTKCASPIHLKDRNIADVQEHEFKCSG------------------------ 235
Query: 281 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL 340
PVE+ EC+AEP CPHPCRCADGIVDCRE L KVP LPE TTEL
Sbjct: 236 PVERTGSECSAEPQCPHPCRCADGIVDCRENSLTKVPTHLPEDTTEL------------- 282
Query: 341 LYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYK 400
RLEQN ITE+PPKAF+ Y++LRRI L N I ++ AF K
Sbjct: 283 -----------------RLEQNRITEIPPKAFSPYRKLRRIDLSNNQIKKVAADAFHGLK 325
Query: 401 RLRRM 405
L +
Sbjct: 326 SLESL 330
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 131/447 (29%), Positives = 199/447 (44%), Gaps = 76/447 (17%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
+NN+ L +G FA L + TL ++ N FICDC+L WL+ +L +P KC +P +
Sbjct: 382 DNNIRSLANGTFANLRSIETLHLARNPFICDCNLRWLNAYLHAHPIETSGAKCESPKRAQ 441
Query: 67 GQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+ I + + +FKC G E K GEC CP PC C VDC K L +P LP
Sbjct: 442 KRKIDSMRDDKFKCKGDEELLTKRAGECILPGECPDPCVCNGATVDCSNKKLTSIPKELP 501
Query: 124 EATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQ------------- 169
T+ L L N++ ++ F L+ +DL KN+IS++ +FQ
Sbjct: 502 IYTSTLLLANNELDKIKADGLFEKLPELQHLDLRKNKISRIEASSFQGAHKLTDLLLSEN 561
Query: 170 -----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLH 218
GL +L +L L+ N +T + G F L +RT+ + N C+CHL+W
Sbjct: 562 RLREVHNKMFTGLTNLKTLNLHGNAITCVMQGSFDGLTHIRTINMQGNPLSCNCHLAWFA 621
Query: 219 RWLKR--YPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHP 276
WL++ P G+ C P +K + DIP HEFKC+ S+
Sbjct: 622 GWLRKRETPLSGVVGHCHDPPRLKDAIVKDIPHHEFKCNNDSV----------------- 664
Query: 277 YNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSI--- 333
C + CP C CA +V C L ++P +P TTEL V+
Sbjct: 665 -----------GCLGDDYCPPQCNCAGSVVRCSRSQLTEIPRGIPPETTELYLDVNDIKT 713
Query: 334 ---DRVD--KVLLYSYISNN---------FKRWTNRSRR-LEQNDITELPPKAFANYKRL 378
+R++ ++L +SNN F+ T S + N + + A A K L
Sbjct: 714 IQPERLNHLRILTRLDLSNNQIGMLSNDTFRNLTKLSHLIISYNKLQCVQRNALAGLKSL 773
Query: 379 RRIRLEQNDITELPPKAFANYKRLRRM 405
R + L NDI+ +P AF + + + +
Sbjct: 774 RIMSLHGNDISVIPEGAFEDLQSITHL 800
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 152/327 (46%), Gaps = 40/327 (12%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKR--YPRLGLYTKCFAP 62
L+ N +T + G F L +RT+ + N C+CHL+W WL++ P G+ C P
Sbjct: 582 LHGNAITCVMQGSFDGLTHIRTINMQGNPLSCNCHLAWFAGWLRKRETPLSGVVGHCHDP 641
Query: 63 SHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILL 122
+K + DIP HEFKC+ + C + CP C CA +V C L ++P +
Sbjct: 642 PRLKDAIVKDIPHHEFKCN----NDSVGCLGDDYCPPQCNCAGSVVRCSRSQLTEIPRGI 697
Query: 123 PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ------------- 169
P TTEL L+ NDI + P+ + + L R+DLS NQI ++ D F+
Sbjct: 698 PPETTELYLDVNDIKTIQPERLNHLRILTRLDLSNNQIGMLSNDTFRNLTKLSHLIISYN 757
Query: 170 -----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLH 218
GLKSL ++L+ N+++ +P+G F +L + L + N CDC + WL
Sbjct: 758 KLQCVQRNALAGLKSLRIMSLHGNDISVIPEGAFEDLQSITHLALGSNPLYCDCSMRWLA 817
Query: 219 RWLKR-YPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPY 277
W+K+ Y G+ +C P ++ + +L P F+C S + C T
Sbjct: 818 EWVKKDYVEAGI-ARCMEPPAMRDKLLLTTPATAFQCKTSQQPAEVLAKCDLCYTS---- 872
Query: 278 NSCPVEKPTGECAAEPSCPHPCRCADG 304
P + G C A P C+CA G
Sbjct: 873 ---PCQN-GGFCEALPDRKFRCKCAPG 895
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 18/120 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKR-YPRLGLYTKCFAP 62
+L+ N+++ +P+G F +L + L + N CDC + WL W+K+ Y G+ +C P
Sbjct: 777 SLHGNDISVIPEGAFEDLQSITHLALGSNPLYCDCSMRWLAEWVKKDYVEAGI-ARCMEP 835
Query: 63 SHIKGQNILDIPEHEFKC---SGPVE-------------KPTGECAAEPSCPHPCRCADG 106
++ + +L P F+C P E + G C A P C+CA G
Sbjct: 836 PAMRDKLLLTTPATAFQCKTSQQPAEVLAKCDLCYTSPCQNGGFCEALPDRKFRCKCAPG 895
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%)
Query: 131 LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDG 190
L+ N+I+ + F + L + LS NQI + AFQ L + L LNNN + +LPD
Sbjct: 38 LQGNNISVIFKTDFEDMATLHVLWLSNNQIHTIERGAFQDLVGVEKLRLNNNQIRHLPDL 97
Query: 191 VFAELFRLRTLRISENSF 208
+F+ + L+ L +S N
Sbjct: 98 LFSNMMNLKRLDLSHNQI 115
>gi|350418224|ref|XP_003491791.1| PREDICTED: protein slit-like [Bombus impatiens]
Length = 1508
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 178/450 (39%), Positives = 236/450 (52%), Gaps = 76/450 (16%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
LNNN LT L + + LRTL++ +N CDCHL+WL R LK YPRLG +T+C +P H
Sbjct: 220 LNNNKLTTLGKEMLSGFSHLRTLKLVDNPLSCDCHLAWLSRHLKTYPRLGQHTRCSSPIH 279
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+K +NI D+ EHEFKCSG VE+ EC+AEP CPHPCRCADGIVDCRE L KVP LPE
Sbjct: 280 LKDRNIADLQEHEFKCSGLVERTGSECSAEPQCPHPCRCADGIVDCRENSLTKVPTHLPE 339
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLK------------ 172
TTELRLEQN ITE+PPKAF+ Y++LRRIDLS NQI KVA DAF GLK
Sbjct: 340 DTTELRLEQNRITEIPPKAFSPYRKLRRIDLSNNQIKKVAADAFHGLKSLESLVLYGNKI 399
Query: 173 ------------SLTSLTLN------------------------NNNLTYLPDGVFAELF 196
+L L LN +NN+ L +G FA L
Sbjct: 400 TELPGGLFQGLTNLQLLLLNANEISCIRTDLFRDLTSLTLLSLYDNNIRSLANGTFANLR 459
Query: 197 RLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
+ TL ++ N FICDC+L WL+ +L +P KC +P + + I + + +FKC G
Sbjct: 460 SIETLHLARNPFICDCNLRWLNAYLHAHPIETSGAKCESPKRAQKRKIDSMRDDKFKCKG 519
Query: 257 SSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKV 316
EE T K GEC CP PC C +DC K L +
Sbjct: 520 D----------EELLT-----------KRAGECILPGECPEPCICNGATIDCSNKKLTSI 558
Query: 317 PILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFANY 375
P LP T+ T +++ + +DK+ F++ + L +N I+ + AF+
Sbjct: 559 PKELPIYTS--TLLLANNELDKI----KADGVFEKLPELQHLDLRKNKISRIEASAFSGA 612
Query: 376 KRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+L + L +N + E+ K F L+ +
Sbjct: 613 HKLTDLLLSENRLREVHNKMFTGLTNLKTL 642
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 170/383 (44%), Gaps = 128/383 (33%)
Query: 97 CPHPCRCADGIVDCREKGLNKVP-----ILLPE--------------------------- 124
CP C C VDC ++GL ++P +LL E
Sbjct: 64 CPWLCTCTGQEVDCSQQGLTQIPGDLASLLLAEKLDLQGNNISVIFKTDFEDMATLHVLC 123
Query: 125 ------------------ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVD 166
+LRL N I +P F+N L+R+DLS NQI+ +
Sbjct: 124 LSNNQIHTIERGAFQDLVGVEKLRLNNNQIRHIPDLLFSNMMNLKRLDLSHNQIATIGPK 183
Query: 167 AFQG------------------------LKSLTSLTLNNNNLTYLPDGVFAELFRLRTLR 202
+G LK L L LNNN LT L + + LRTL+
Sbjct: 184 TLRGISSLKYLYLDNNVLTCIDEASIRELKDLEVLMLNNNKLTTLGKEMLSGFSHLRTLK 243
Query: 203 ISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETR 262
+ +N CDCHL+WL R LK YPRLG +T+C +P H+K +NI D+ EHEFKCSG
Sbjct: 244 LVDNPLSCDCHLAWLSRHLKTYPRLGQHTRCSSPIHLKDRNIADLQEHEFKCSGL----- 298
Query: 263 SKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 322
VE+ EC+AEP CPHPCRCADGIVDCRE L KVP LPE
Sbjct: 299 -------------------VERTGSECSAEPQCPHPCRCADGIVDCRENSLTKVPTHLPE 339
Query: 323 ATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIR 382
TTEL RLEQN ITE+PPKAF+ Y++LRRI
Sbjct: 340 DTTEL------------------------------RLEQNRITEIPPKAFSPYRKLRRID 369
Query: 383 LEQNDITELPPKAFANYKRLRRM 405
L N I ++ AF K L +
Sbjct: 370 LSNNQIKKVAADAFHGLKSLESL 392
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 130/445 (29%), Positives = 197/445 (44%), Gaps = 74/445 (16%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
+NN+ L +G FA L + TL ++ N FICDC+L WL+ +L +P KC +P +
Sbjct: 444 DNNIRSLANGTFANLRSIETLHLARNPFICDCNLRWLNAYLHAHPIETSGAKCESPKRAQ 503
Query: 67 GQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+ I + + +FKC G E K GEC CP PC C +DC K L +P LP
Sbjct: 504 KRKIDSMRDDKFKCKGDEELLTKRAGECILPGECPEPCICNGATIDCSNKKLTSIPKELP 563
Query: 124 EATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG------------ 170
T+ L L N++ ++ F L+ +DL KN+IS++ AF G
Sbjct: 564 IYTSTLLLANNELDKIKADGVFEKLPELQHLDLRKNKISRIEASAFSGAHKLTDLLLSEN 623
Query: 171 ------------LKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLH 218
L +L +L L+ N +T + G F L +RT+ + N C+CHL+W
Sbjct: 624 RLREVHNKMFTGLTNLKTLNLHGNAITCVMHGSFDGLTHIRTINMQSNPLSCNCHLAWFA 683
Query: 219 RWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYN 278
WL++ G+ C P +K I DIP HEFKC+ S+
Sbjct: 684 GWLRKRDMSGVVGHCHDPPRLKSAIIKDIPHHEFKCNNDSV------------------- 724
Query: 279 SCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSI----- 333
C + CP C CA +V C L ++P +P TTEL V+
Sbjct: 725 ---------GCLGDDYCPPQCNCAGSVVRCSRSQLTEIPRGIPPETTELYLDVNDIKTIQ 775
Query: 334 -DRVD--KVLLYSYISNN---------FKRWTNRSRR-LEQNDITELPPKAFANYKRLRR 380
+R++ ++L +SNN F+ T S + N + + A A K LR
Sbjct: 776 PERLNHLRILTRLDLSNNQIGMLSNDTFRNLTKLSHLIISYNKLQCVQRNALAGLKSLRI 835
Query: 381 IRLEQNDITELPPKAFANYKRLRRM 405
+ L NDI+ +P AF + + + +
Sbjct: 836 MSLHGNDISVIPEGAFEDLQSITHL 860
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 151/325 (46%), Gaps = 38/325 (11%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N +T + G F L +RT+ + N C+CHL+W WL++ G+ C P
Sbjct: 644 LHGNAITCVMHGSFDGLTHIRTINMQSNPLSCNCHLAWFAGWLRKRDMSGVVGHCHDPPR 703
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+K I DIP HEFKC+ + C + CP C CA +V C L ++P +P
Sbjct: 704 LKSAIIKDIPHHEFKCN----NDSVGCLGDDYCPPQCNCAGSVVRCSRSQLTEIPRGIPP 759
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ--------------- 169
TTEL L+ NDI + P+ + + L R+DLS NQI ++ D F+
Sbjct: 760 ETTELYLDVNDIKTIQPERLNHLRILTRLDLSNNQIGMLSNDTFRNLTKLSHLIISYNKL 819
Query: 170 ---------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW 220
GLKSL ++L+ N+++ +P+G F +L + L + N CDC + WL W
Sbjct: 820 QCVQRNALAGLKSLRIMSLHGNDISVIPEGAFEDLQSITHLALGSNPLYCDCSMRWLAEW 879
Query: 221 LKR-YPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
+K+ Y G+ +C P ++ + +L P F+C + + C T
Sbjct: 880 VKKDYVEAGI-ARCMEPPAMRDKLLLTTPATAFQCKTNQQPAEVLAKCDLCYTS------ 932
Query: 280 CPVEKPTGECAAEPSCPHPCRCADG 304
P + G C A P C+CA G
Sbjct: 933 -PCQN-GGFCEALPDRKFRCKCAPG 955
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 18/120 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKR-YPRLGLYTKCFAP 62
+L+ N+++ +P+G F +L + L + N CDC + WL W+K+ Y G+ +C P
Sbjct: 837 SLHGNDISVIPEGAFEDLQSITHLALGSNPLYCDCSMRWLAEWVKKDYVEAGI-ARCMEP 895
Query: 63 SHIKGQNILDIPEHEFKC---SGPVE-------------KPTGECAAEPSCPHPCRCADG 106
++ + +L P F+C P E + G C A P C+CA G
Sbjct: 896 PAMRDKLLLTTPATAFQCKTNQQPAEVLAKCDLCYTSPCQNGGFCEALPDRKFRCKCAPG 955
>gi|340717834|ref|XP_003397380.1| PREDICTED: protein slit-like [Bombus terrestris]
Length = 1508
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 178/450 (39%), Positives = 236/450 (52%), Gaps = 76/450 (16%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
LNNN LT L + + LRTL++ +N CDCHL+WL R LK YPRLG +T+C +P H
Sbjct: 220 LNNNKLTTLGKEMLSGFSHLRTLKLVDNPLSCDCHLAWLSRHLKTYPRLGQHTRCSSPIH 279
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+K +NI D+ EHEFKCSG VE+ EC+AEP CPHPCRCADGIVDCRE L KVP LPE
Sbjct: 280 LKDRNIADLQEHEFKCSGLVERTGSECSAEPQCPHPCRCADGIVDCRENSLTKVPTHLPE 339
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLK------------ 172
TTELRLEQN ITE+PPKAF+ Y++LRRIDLS NQI KVA DAF GLK
Sbjct: 340 DTTELRLEQNRITEIPPKAFSPYRKLRRIDLSNNQIKKVAADAFHGLKSLESLVLYGNKI 399
Query: 173 ------------SLTSLTLN------------------------NNNLTYLPDGVFAELF 196
+L L LN +NN+ L +G FA L
Sbjct: 400 TELPGGLFQGLTNLQLLLLNANEISCIRTDLFRDLTSLTLLSLYDNNIRSLANGTFANLR 459
Query: 197 RLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
+ TL ++ N FICDC+L WL+ +L +P KC +P + + I + + +FKC G
Sbjct: 460 SIETLHLARNPFICDCNLRWLNAYLHAHPIETSGAKCESPKRAQKRKIDSMRDDKFKCKG 519
Query: 257 SSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKV 316
EE T K GEC CP PC C +DC K L +
Sbjct: 520 D----------EELLT-----------KRAGECILPGECPEPCICNGATIDCSNKKLTSI 558
Query: 317 PILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFANY 375
P LP T+ T +++ + +DK+ F++ + L +N I+ + AF+
Sbjct: 559 PKELPIYTS--TLLLANNELDKI----KADGVFEKLPELQHLDLRKNKISRIEASAFSGA 612
Query: 376 KRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+L + L +N + E+ K F L+ +
Sbjct: 613 HKLTDLLLSENRLREVHNKMFTGLTNLKTL 642
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 170/383 (44%), Gaps = 128/383 (33%)
Query: 97 CPHPCRCADGIVDCREKGLNKVP-----ILLPE--------------------------- 124
CP C C VDC ++GL ++P +LL E
Sbjct: 64 CPWLCTCTGQEVDCSQQGLTQIPGDLASLLLAEKLDLQGNNISVIFKTDFEDMATLHVLC 123
Query: 125 ------------------ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVD 166
+LRL N I +P F+N L+R+DLS NQI+ +
Sbjct: 124 LSNNQIHTIERGAFQDLVGVEKLRLNNNQIRHIPDLLFSNMMNLKRLDLSHNQIATIGPK 183
Query: 167 AFQG------------------------LKSLTSLTLNNNNLTYLPDGVFAELFRLRTLR 202
+G LK L L LNNN LT L + + LRTL+
Sbjct: 184 TLRGISSLKYLYLDNNVLTCIDEASIRELKDLEVLMLNNNKLTTLGKEMLSGFSHLRTLK 243
Query: 203 ISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETR 262
+ +N CDCHL+WL R LK YPRLG +T+C +P H+K +NI D+ EHEFKCSG
Sbjct: 244 LVDNPLSCDCHLAWLSRHLKTYPRLGQHTRCSSPIHLKDRNIADLQEHEFKCSGL----- 298
Query: 263 SKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 322
VE+ EC+AEP CPHPCRCADGIVDCRE L KVP LPE
Sbjct: 299 -------------------VERTGSECSAEPQCPHPCRCADGIVDCRENSLTKVPTHLPE 339
Query: 323 ATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIR 382
TTEL RLEQN ITE+PPKAF+ Y++LRRI
Sbjct: 340 DTTEL------------------------------RLEQNRITEIPPKAFSPYRKLRRID 369
Query: 383 LEQNDITELPPKAFANYKRLRRM 405
L N I ++ AF K L +
Sbjct: 370 LSNNQIKKVAADAFHGLKSLESL 392
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 130/445 (29%), Positives = 197/445 (44%), Gaps = 74/445 (16%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
+NN+ L +G FA L + TL ++ N FICDC+L WL+ +L +P KC +P +
Sbjct: 444 DNNIRSLANGTFANLRSIETLHLARNPFICDCNLRWLNAYLHAHPIETSGAKCESPKRAQ 503
Query: 67 GQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+ I + + +FKC G E K GEC CP PC C +DC K L +P LP
Sbjct: 504 KRKIDSMRDDKFKCKGDEELLTKRAGECILPGECPEPCICNGATIDCSNKKLTSIPKELP 563
Query: 124 EATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG------------ 170
T+ L L N++ ++ F L+ +DL KN+IS++ AF G
Sbjct: 564 IYTSTLLLANNELDKIKADGVFEKLPELQHLDLRKNKISRIEASAFSGAHKLTDLLLSEN 623
Query: 171 ------------LKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLH 218
L +L +L L+ N +T + G F L +RT+ + N C+CHL+W
Sbjct: 624 RLREVHNKMFTGLTNLKTLNLHGNAITCVMHGSFDGLTHIRTINMQSNPLSCNCHLAWFA 683
Query: 219 RWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYN 278
WL++ G+ C P +K I DIP HEFKC+ S+
Sbjct: 684 GWLRKRDMSGVVGHCHDPPRLKSAIIKDIPHHEFKCNNDSV------------------- 724
Query: 279 SCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSI----- 333
C + CP C CA +V C L ++P +P TTEL V+
Sbjct: 725 ---------GCLGDDYCPPQCNCAGSVVRCSRSQLTEIPRGIPPETTELYLDVNDIKTIQ 775
Query: 334 -DRVD--KVLLYSYISNN---------FKRWTNRSRR-LEQNDITELPPKAFANYKRLRR 380
+R++ ++L +SNN F+ T S + N + + A A K LR
Sbjct: 776 PERLNHLRILTRLDLSNNQIGMLSNDTFRNLTKLSHLIISYNKLQCVQRNALAGLKSLRI 835
Query: 381 IRLEQNDITELPPKAFANYKRLRRM 405
+ L NDI+ +P AF + + + +
Sbjct: 836 MSLHGNDISVIPEGAFEDLQSITHL 860
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 151/325 (46%), Gaps = 38/325 (11%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N +T + G F L +RT+ + N C+CHL+W WL++ G+ C P
Sbjct: 644 LHGNAITCVMHGSFDGLTHIRTINMQSNPLSCNCHLAWFAGWLRKRDMSGVVGHCHDPPR 703
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+K I DIP HEFKC+ + C + CP C CA +V C L ++P +P
Sbjct: 704 LKSAIIKDIPHHEFKCN----NDSVGCLGDDYCPPQCNCAGSVVRCSRSQLTEIPRGIPP 759
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ--------------- 169
TTEL L+ NDI + P+ + + L R+DLS NQI ++ D F+
Sbjct: 760 ETTELYLDVNDIKTIQPERLNHLRILTRLDLSNNQIGMLSNDTFRNLTKLSHLIISYNKL 819
Query: 170 ---------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW 220
GLKSL ++L+ N+++ +P+G F +L + L + N CDC + WL W
Sbjct: 820 QCVQRNALAGLKSLRIMSLHGNDISVIPEGAFEDLQSITHLALGSNPLYCDCSMRWLAEW 879
Query: 221 LKR-YPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
+K+ Y G+ +C P ++ + +L P F+C + + C T
Sbjct: 880 VKKDYVEAGI-ARCMEPPAMRDKLLLTTPATAFQCKTNQQPAEVLAKCDLCYTS------ 932
Query: 280 CPVEKPTGECAAEPSCPHPCRCADG 304
P + G C A P C+CA G
Sbjct: 933 -PCQN-GGFCEALPDRKFRCKCAPG 955
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 18/120 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKR-YPRLGLYTKCFAP 62
+L+ N+++ +P+G F +L + L + N CDC + WL W+K+ Y G+ +C P
Sbjct: 837 SLHGNDISVIPEGAFEDLQSITHLALGSNPLYCDCSMRWLAEWVKKDYVEAGI-ARCMEP 895
Query: 63 SHIKGQNILDIPEHEFKC---SGPVE-------------KPTGECAAEPSCPHPCRCADG 106
++ + +L P F+C P E + G C A P C+CA G
Sbjct: 896 PAMRDKLLLTTPATAFQCKTNQQPAEVLAKCDLCYTSPCQNGGFCEALPDRKFRCKCAPG 955
>gi|332029050|gb|EGI69064.1| Protein slit [Acromyrmex echinatior]
Length = 1411
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 178/449 (39%), Positives = 235/449 (52%), Gaps = 74/449 (16%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
LNNN L L + L LRTL+++EN+F CDCHL+WL R LK YPRLG +T+C +P+H
Sbjct: 123 LNNNKLITLGKEMLNGLSHLRTLKLAENAFACDCHLAWLSRHLKTYPRLGQHTRCSSPAH 182
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+K +N+ ++ EHEFKCSG VE+ EC+AEP CPHPC+CADGIVDCRE L KVP LPE
Sbjct: 183 LKERNLAEVQEHEFKCSGLVERTGSECSAEPQCPHPCKCADGIVDCRENSLTKVPTHLPE 242
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLK------------ 172
TTELRLEQN ITE+PPKAF+ Y++LRRIDLS NQI KVA DAF GLK
Sbjct: 243 DTTELRLEQNGITEIPPKAFSPYRKLRRIDLSNNQIKKVAADAFHGLKSLESLVLYGNKI 302
Query: 173 ------------SLTSLTLN------------------------NNNLTYLPDGVFAELF 196
+L L LN +NN+ L +G FA L
Sbjct: 303 TELPAGLFQGLTNLQLLLLNANEISCIRTDLFKDLTSLTLLSLYDNNIRSLANGTFANLR 362
Query: 197 RLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
++TL ++ N FICDC+L WL +L +P KC P + + I + + +FKC G
Sbjct: 363 SIKTLHLARNPFICDCNLRWLSAYLHAHPIETSGAKCETPKRAQKRKIDSMRDDKFKCKG 422
Query: 257 SSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKV 316
EE T K GEC +CP C C VDC K L +
Sbjct: 423 D----------EELLT-----------KRAGECILPGACPAQCTCNGATVDCSNKRLTAI 461
Query: 317 PILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYK 376
P LP T+ T ++S + +DK+ K + L +N I+ + AF
Sbjct: 462 PKDLPLYTS--TLLLSNNELDKIKADGLFE---KLPELQHLDLRKNKISRIEASAFQGAH 516
Query: 377 RLRRIRLEQNDITELPPKAFANYKRLRRM 405
L + L +N + E+ K F+ L+ +
Sbjct: 517 NLTDLLLSENRLREVHNKMFSGLPSLKTL 545
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 124/305 (40%), Positives = 156/305 (51%), Gaps = 78/305 (25%)
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQG-------------- 170
A +LRL N I LP F+N L+R+DLS NQI+ + +G
Sbjct: 45 AVEKLRLNNNQIRHLPDLLFSNMMNLKRLDLSHNQIATIGPKTLRGVSALRHLLLDNNVL 104
Query: 171 ----------LKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW 220
LK L L LNNN L L + L LRTL+++EN+F CDCHL+WL R
Sbjct: 105 TCVDEASIRELKDLEILMLNNNKLITLGKEMLNGLSHLRTLKLAENAFACDCHLAWLSRH 164
Query: 221 LKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC 280
LK YPRLG +T+C +P+H+K +N+ ++ EHEFKCSG
Sbjct: 165 LKTYPRLGQHTRCSSPAHLKERNLAEVQEHEFKCSGL----------------------- 201
Query: 281 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL 340
VE+ EC+AEP CPHPC+CADGIVDCRE L KVP LPE TTEL
Sbjct: 202 -VERTGSECSAEPQCPHPCKCADGIVDCRENSLTKVPTHLPEDTTEL------------- 247
Query: 341 LYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYK 400
RLEQN ITE+PPKAF+ Y++LRRI L N I ++ AF K
Sbjct: 248 -----------------RLEQNGITEIPPKAFSPYRKLRRIDLSNNQIKKVAADAFHGLK 290
Query: 401 RLRRM 405
L +
Sbjct: 291 SLESL 295
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 132/445 (29%), Positives = 198/445 (44%), Gaps = 74/445 (16%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
+NN+ L +G FA L ++TL ++ N FICDC+L WL +L +P KC P +
Sbjct: 347 DNNIRSLANGTFANLRSIKTLHLARNPFICDCNLRWLSAYLHAHPIETSGAKCETPKRAQ 406
Query: 67 GQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+ I + + +FKC G E K GEC +CP C C VDC K L +P LP
Sbjct: 407 KRKIDSMRDDKFKCKGDEELLTKRAGECILPGACPAQCTCNGATVDCSNKRLTAIPKDLP 466
Query: 124 EATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNN 182
T+ L L N++ ++ F L+ +DL KN+IS++ AFQG +LT L L+ N
Sbjct: 467 LYTSTLLLSNNELDKIKADGLFEKLPELQHLDLRKNKISRIEASAFQGAHNLTDLLLSEN 526
Query: 183 NLTYLPDGVFAELFRLRTLRISENSFIC------------------------DCHLSWLH 218
L + + +F+ L L+TL + NS C +C+L+W
Sbjct: 527 RLREVHNKMFSGLPSLKTLNLHGNSITCVMPGSFDGMPHIRAINMQGNPLSCNCYLAWFA 586
Query: 219 RWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYN 278
WL++ G+ +C P +K I DIP HEFKC+ S+
Sbjct: 587 GWLRKRDIAGITGRCHDPPRLKDAIIKDIPHHEFKCNNDSV------------------- 627
Query: 279 SCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL------TYMVS 332
C + CP C CA +V C L ++P +P TTEL +
Sbjct: 628 ---------GCLGDDYCPPQCNCAGSVVRCSRSQLTEIPRGIPPETTELYLDVNDIKTIQ 678
Query: 333 IDRVD--KVLLYSYISNN---------FKRWTNRSRR-LEQNDITELPPKAFANYKRLRR 380
+R++ ++L +SNN F+ T S + N + + A A K LR
Sbjct: 679 PERLNHLRILTRLDLSNNQIGMLSNDTFRNLTKLSHLIISYNKLQCVQRNALAGLKNLRI 738
Query: 381 IRLEQNDITELPPKAFANYKRLRRM 405
I L NDI+ +P AF + K + +
Sbjct: 739 ISLHGNDISVIPEGAFEDLKSITHL 763
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 150/325 (46%), Gaps = 38/325 (11%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N++T + G F + +R + + N C+C+L+W WL++ G+ +C P
Sbjct: 547 LHGNSITCVMPGSFDGMPHIRAINMQGNPLSCNCYLAWFAGWLRKRDIAGITGRCHDPPR 606
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+K I DIP HEFKC+ + C + CP C CA +V C L ++P +P
Sbjct: 607 LKDAIIKDIPHHEFKCN----NDSVGCLGDDYCPPQCNCAGSVVRCSRSQLTEIPRGIPP 662
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ--------------- 169
TTEL L+ NDI + P+ + + L R+DLS NQI ++ D F+
Sbjct: 663 ETTELYLDVNDIKTIQPERLNHLRILTRLDLSNNQIGMLSNDTFRNLTKLSHLIISYNKL 722
Query: 170 ---------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW 220
GLK+L ++L+ N+++ +P+G F +L + L + N CDC + WL W
Sbjct: 723 QCVQRNALAGLKNLRIISLHGNDISVIPEGAFEDLKSITHLALGSNPLYCDCSMRWLAEW 782
Query: 221 LKR-YPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
+K+ Y G+ +C P ++ + +L P F+C + C T
Sbjct: 783 VKKDYVEPGI-ARCMEPPAMRDKLLLTTPASAFQCKTKQQPAEVLAKCDLCYTS------ 835
Query: 280 CPVEKPTGECAAEPSCPHPCRCADG 304
P E G C A P C+C G
Sbjct: 836 -PCEN-GGFCEALPDRQFRCKCTPG 858
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKR-YPRLGLYTKCFAP 62
+L+ N+++ +P+G F +L + L + N CDC + WL W+K+ Y G+ +C P
Sbjct: 740 SLHGNDISVIPEGAFEDLKSITHLALGSNPLYCDCSMRWLAEWVKKDYVEPGI-ARCMEP 798
Query: 63 SHIKGQNILDIPEHEFKC 80
++ + +L P F+C
Sbjct: 799 PAMRDKLLLTTPASAFQC 816
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%)
Query: 131 LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDG 190
L+ N+++ + F + L + LS NQI + AFQ L ++ L LNNN + +LPD
Sbjct: 3 LQGNNVSVIFKTDFEDMATLHVLLLSNNQIHTIERGAFQDLVAVEKLRLNNNQIRHLPDL 62
Query: 191 VFAELFRLRTLRISENSF 208
+F+ + L+ L +S N
Sbjct: 63 LFSNMMNLKRLDLSHNQI 80
>gi|307203178|gb|EFN82339.1| Protein slit [Harpegnathos saltator]
Length = 1400
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 177/455 (38%), Positives = 235/455 (51%), Gaps = 80/455 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
LNNN L L + L LRTL++++N+F CDCHL+WL R L+ YPRLG +T+C +P H
Sbjct: 105 LNNNKLVTLGKETLSGLSHLRTLKLTDNAFACDCHLAWLSRHLRTYPRLGQHTRCASPVH 164
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+K ++++D+ EHEFKCSG VE+ EC+AEP CPHPC+CADGIVDCRE L KVP LPE
Sbjct: 165 LKDRSLVDLQEHEFKCSGLVERTGSECSAEPQCPHPCKCADGIVDCRENSLTKVPTHLPE 224
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLK------------ 172
TTELRLEQN I E+PPKAF+ Y++LRRIDLS NQI KVA DAF GLK
Sbjct: 225 DTTELRLEQNGIMEIPPKAFSPYRKLRRIDLSNNQIRKVAADAFHGLKSLESIVLYGNKI 284
Query: 173 ------------SLTSLTLN------------------------NNNLTYLPDGVFAELF 196
+L L LN +NN+ L +G FA L
Sbjct: 285 TELPAGLFQGLTNLQLLLLNANEISCIRTDLFKDLTSLTLLSLYDNNIRSLANGTFANLR 344
Query: 197 RLRTLRIS------ENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEH 250
++TL +S N FICDC+L WL +L +P KC P + + I + +
Sbjct: 345 SIKTLFVSLVIHLARNPFICDCNLRWLSAYLHAHPIETSGAKCEMPKRAQKRKIDSMRDD 404
Query: 251 EFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCRE 310
+FKC G EE T K GEC +CP PC C VDC
Sbjct: 405 KFKCKGD----------EELLT-----------KRAGECILPGACPAPCTCNGATVDCSN 443
Query: 311 KGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPK 370
K L +P LP T+ T ++S + +DK+ K + L +N I+ +
Sbjct: 444 KRLTSIPKDLPLYTS--TLLLSNNELDKIKADGLFE---KLPELQHLDLRKNKISRIEAS 498
Query: 371 AFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
AF L + L +N + E+ K F+ L+ +
Sbjct: 499 AFQGAHNLTDLLLSENRLREVHNKMFSGLSSLKTL 533
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 121/305 (39%), Positives = 155/305 (50%), Gaps = 78/305 (25%)
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQG-------------- 170
A +LRL N I LP F+N L+R+DLS NQI+ + +G
Sbjct: 27 AVEKLRLNNNQIRHLPDLLFSNMMNLKRLDLSHNQIATIGPKTLRGVSALRHLLLDDNVL 86
Query: 171 ----------LKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW 220
LK L L LNNN L L + L LRTL++++N+F CDCHL+WL R
Sbjct: 87 TCIDEASIRELKDLEILMLNNNKLVTLGKETLSGLSHLRTLKLTDNAFACDCHLAWLSRH 146
Query: 221 LKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC 280
L+ YPRLG +T+C +P H+K ++++D+ EHEFKCSG
Sbjct: 147 LRTYPRLGQHTRCASPVHLKDRSLVDLQEHEFKCSGL----------------------- 183
Query: 281 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL 340
VE+ EC+AEP CPHPC+CADGIVDCRE L KVP LPE TTEL
Sbjct: 184 -VERTGSECSAEPQCPHPCKCADGIVDCRENSLTKVPTHLPEDTTEL------------- 229
Query: 341 LYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYK 400
RLEQN I E+PPKAF+ Y++LRRI L N I ++ AF K
Sbjct: 230 -----------------RLEQNGIMEIPPKAFSPYRKLRRIDLSNNQIRKVAADAFHGLK 272
Query: 401 RLRRM 405
L +
Sbjct: 273 SLESI 277
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 132/451 (29%), Positives = 200/451 (44%), Gaps = 80/451 (17%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRIS------ENSFICDCHLSWLHRWLKRYPRLGLYTKCF 60
+NN+ L +G FA L ++TL +S N FICDC+L WL +L +P KC
Sbjct: 329 DNNIRSLANGTFANLRSIKTLFVSLVIHLARNPFICDCNLRWLSAYLHAHPIETSGAKCE 388
Query: 61 APSHIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNK 117
P + + I + + +FKC G E K GEC +CP PC C VDC K L
Sbjct: 389 MPKRAQKRKIDSMRDDKFKCKGDEELLTKRAGECILPGACPAPCTCNGATVDCSNKRLTS 448
Query: 118 VPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG------ 170
+P LP T+ L L N++ ++ F L+ +DL KN+IS++ AFQG
Sbjct: 449 IPKDLPLYTSTLLLSNNELDKIKADGLFEKLPELQHLDLRKNKISRIEASAFQGAHNLTD 508
Query: 171 ------------------LKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC 212
L SL +L L++N +T + G F + +RT+ + N C+C
Sbjct: 509 LLLSENRLREVHNKMFSGLSSLKTLNLHSNAVTCVMPGSFDGMAHIRTINMQGNPLSCNC 568
Query: 213 HLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECST 272
+L+W WL++ +G+ +C P +K + DIP HEFKC+ S+
Sbjct: 569 YLAWFAGWLRKRDMVGVTGRCHDPPRLKDAVVKDIPHHEFKCNNDSV------------- 615
Query: 273 DFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL----- 327
C + CP C CA +V C L ++P +P TTEL
Sbjct: 616 ---------------GCLGDDYCPPRCNCAGSVVRCSRSQLTEIPRGIPPETTELYLDVN 660
Query: 328 -TYMVSIDRVD--KVLLYSYISNN---------FKRWTNRSRR-LEQNDITELPPKAFAN 374
+ +R++ ++L +SNN F+ T S + N + + A A
Sbjct: 661 DIKTIQPERLNHLRILTRLDLSNNQIGMLSNDTFRNLTKLSHLIISYNKLQCVQRNALAG 720
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
K LR I L NDI+ +P AF + K + +
Sbjct: 721 LKNLRIISLHGNDISVIPEGAFEDLKSITHL 751
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 153/325 (47%), Gaps = 38/325 (11%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N +T + G F + +RT+ + N C+C+L+W WL++ +G+ +C P
Sbjct: 535 LHSNAVTCVMPGSFDGMAHIRTINMQGNPLSCNCYLAWFAGWLRKRDMVGVTGRCHDPPR 594
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+K + DIP HEFKC+ + C + CP C CA +V C L ++P +P
Sbjct: 595 LKDAVVKDIPHHEFKCN----NDSVGCLGDDYCPPRCNCAGSVVRCSRSQLTEIPRGIPP 650
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ--------------- 169
TTEL L+ NDI + P+ + + L R+DLS NQI ++ D F+
Sbjct: 651 ETTELYLDVNDIKTIQPERLNHLRILTRLDLSNNQIGMLSNDTFRNLTKLSHLIISYNKL 710
Query: 170 ---------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW 220
GLK+L ++L+ N+++ +P+G F +L + L + N CDC + WL W
Sbjct: 711 QCVQRNALAGLKNLRIISLHGNDISVIPEGAFEDLKSITHLALGSNPLYCDCTMRWLAEW 770
Query: 221 LKR-YPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
+K+ Y G+ +C P ++ + +L P F+C + C T
Sbjct: 771 VKKDYVEPGI-ARCMEPPAMRDKLLLTTPASAFQCKTKQQPAEVLAKCDLCYTS------ 823
Query: 280 CPVEKPTGECAAEPSCPHPCRCADG 304
P + G C A P C+CA G
Sbjct: 824 -PCQN-GGFCEALPERQFRCKCAPG 846
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 18/120 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKR-YPRLGLYTKCFAP 62
+L+ N+++ +P+G F +L + L + N CDC + WL W+K+ Y G+ +C P
Sbjct: 728 SLHGNDISVIPEGAFEDLKSITHLALGSNPLYCDCTMRWLAEWVKKDYVEPGI-ARCMEP 786
Query: 63 SHIKGQNILDIPEHEFKC---SGPVE-------------KPTGECAAEPSCPHPCRCADG 106
++ + +L P F+C P E + G C A P C+CA G
Sbjct: 787 PAMRDKLLLTTPASAFQCKTKQQPAEVLAKCDLCYTSPCQNGGFCEALPERQFRCKCAPG 846
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 155 LSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
LS NQI + AFQ L ++ L LNNN + +LPD +F+ + L+ L +S N
Sbjct: 9 LSNNQIHTIERGAFQDLVAVEKLRLNNNQIRHLPDLLFSNMMNLKRLDLSHNQI 62
>gi|307165898|gb|EFN60246.1| Protein slit [Camponotus floridanus]
Length = 1512
Score = 281 bits (719), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 177/460 (38%), Positives = 234/460 (50%), Gaps = 85/460 (18%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
LNNN L L + L LRTL++++N+ CDCHL+WL R L+ YPRLG +T+C +P+H
Sbjct: 177 LNNNKLVTLGKEMLNGLSHLRTLKLADNALACDCHLAWLSRHLRTYPRLGQHTRCASPAH 236
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+K +N+ D+ EHEFKCSG VE+ EC+AEP CPHPC+CADGIVDCRE L KVP LPE
Sbjct: 237 LKDRNLADLQEHEFKCSGLVERTGSECSAEPQCPHPCKCADGIVDCRENSLTKVPTHLPE 296
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLK------------ 172
TTELRLEQN ITE+PPKAF+ Y++LRRIDLS NQI KVA DAF GLK
Sbjct: 297 DTTELRLEQNSITEIPPKAFSPYRKLRRIDLSNNQIKKVAADAFHGLKSLESLVLYGNKI 356
Query: 173 ------------SLTSLTLN------------------------NNNLTYLPDGVFAELF 196
+L L LN +NN+ L +G FA L
Sbjct: 357 TELPAGLFQGLTNLQLLLLNANEISCIRTDLFKDLTSLTLLSLYDNNIRSLANGTFANLR 416
Query: 197 RLRTL-----------RISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
++T ++ N FICDC+L WL +L +P KC P + + I
Sbjct: 417 SIKTFTFPVTLFFSHRHLARNPFICDCNLRWLSAYLHAHPIETSGAKCETPKRAQKRKID 476
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
+ + +FKC G EE T K GEC +CP PC C
Sbjct: 477 SMRDDKFKCKGD----------EELLT-----------KRAGECILPGACPAPCTCNGAT 515
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
VDC K L +P LP T+ T ++S + +DK+ K + L +N I+
Sbjct: 516 VDCSNKRLTAIPKDLPLYTS--TLLLSNNELDKIKADGLFE---KLPELQHLDLRKNKIS 570
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ AF L + L +N + E+ K FA L+ +
Sbjct: 571 RIEASAFQGAHNLTDLLLSENRLREVHNKMFAGLSSLKTL 610
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/285 (40%), Positives = 150/285 (52%), Gaps = 55/285 (19%)
Query: 122 LPEATTELR-LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN 180
L ++T E L N I + PK LR + L N ++ + + + LK L L LN
Sbjct: 119 LGQSTIEFEDLSHNQIATIGPKTLRGVSALRHLLLDNNVLTCMDEASIRELKDLEILMLN 178
Query: 181 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 240
NN L L + L LRTL++++N+ CDCHL+WL R L+ YPRLG +T+C +P+H+K
Sbjct: 179 NNKLVTLGKEMLNGLSHLRTLKLADNALACDCHLAWLSRHLRTYPRLGQHTRCASPAHLK 238
Query: 241 GQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCR 300
+N+ D+ EHEFKCSG VE+ EC+AEP CPHPC+
Sbjct: 239 DRNLADLQEHEFKCSGL------------------------VERTGSECSAEPQCPHPCK 274
Query: 301 CADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLE 360
CADGIVDCRE L KVP LPE TTEL RLE
Sbjct: 275 CADGIVDCRENSLTKVPTHLPEDTTEL------------------------------RLE 304
Query: 361 QNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
QN ITE+PPKAF+ Y++LRRI L N I ++ AF K L +
Sbjct: 305 QNSITEIPPKAFSPYRKLRRIDLSNNQIKKVAADAFHGLKSLESL 349
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 134/456 (29%), Positives = 199/456 (43%), Gaps = 85/456 (18%)
Query: 7 NNNLTYLPDGVFAELFRLRTL-----------RISENSFICDCHLSWLHRWLKRYPRLGL 55
+NN+ L +G FA L ++T ++ N FICDC+L WL +L +P
Sbjct: 401 DNNIRSLANGTFANLRSIKTFTFPVTLFFSHRHLARNPFICDCNLRWLSAYLHAHPIETS 460
Query: 56 YTKCFAPSHIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCRE 112
KC P + + I + + +FKC G E K GEC +CP PC C VDC
Sbjct: 461 GAKCETPKRAQKRKIDSMRDDKFKCKGDEELLTKRAGECILPGACPAPCTCNGATVDCSN 520
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQGL 171
K L +P LP T+ L L N++ ++ F L+ +DL KN+IS++ AFQG
Sbjct: 521 KRLTAIPKDLPLYTSTLLLSNNELDKIKADGLFEKLPELQHLDLRKNKISRIEASAFQGA 580
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFIC--------------------- 210
+LT L L+ N L + + +FA L L+TL + NS C
Sbjct: 581 HNLTDLLLSENRLREVHNKMFAGLSSLKTLNLHGNSITCVMPGSFDGMPHIRAINMQSNP 640
Query: 211 ---DCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYR 267
+C+L+W WL++ G+ +C P +K I DIP HEFKC+ S+
Sbjct: 641 LSCNCYLAWFAGWLRKRDIAGITGRCHDPPRLKDAIIKDIPHHEFKCNNDSV-------- 692
Query: 268 EECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL 327
C + CP C CA +V C L ++P +P TTEL
Sbjct: 693 --------------------GCLGDDYCPPQCNCAGSVVRCSRSQLTEIPRGIPPETTEL 732
Query: 328 ------TYMVSIDRVD--KVLLYSYISNN---------FKRWTNRSRR-LEQNDITELPP 369
+ +R++ ++L +SNN F+ TN S + N + +
Sbjct: 733 YLDVNDIKTIQPERLNHLRILTRLDLSNNQIGMLSNDTFRNLTNLSHLIISYNKLQCVQR 792
Query: 370 KAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
A A K LR I L NDI+ +P AF + K + +
Sbjct: 793 NALAGLKNLRIISLHGNDISVIPEGAFEDLKSITHL 828
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 137/275 (49%), Gaps = 30/275 (10%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N++T + G F + +R + + N C+C+L+W WL++ G+ +C P
Sbjct: 612 LHGNSITCVMPGSFDGMPHIRAINMQSNPLSCNCYLAWFAGWLRKRDIAGITGRCHDPPR 671
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+K I DIP HEFKC+ + C + CP C CA +V C L ++P +P
Sbjct: 672 LKDAIIKDIPHHEFKCN----NDSVGCLGDDYCPPQCNCAGSVVRCSRSQLTEIPRGIPP 727
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ--------------- 169
TTEL L+ NDI + P+ + + L R+DLS NQI ++ D F+
Sbjct: 728 ETTELYLDVNDIKTIQPERLNHLRILTRLDLSNNQIGMLSNDTFRNLTNLSHLIISYNKL 787
Query: 170 ---------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW 220
GLK+L ++L+ N+++ +P+G F +L + L + N CDC + WL W
Sbjct: 788 QCVQRNALAGLKNLRIISLHGNDISVIPEGAFEDLKSITHLALGSNPLYCDCSMRWLAEW 847
Query: 221 LKR-YPRLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
+K+ Y G+ +C P ++ + +L P F+C
Sbjct: 848 VKKDYVEPGI-ARCMEPPAMRDKLLLTTPASAFQC 881
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKR-YPRLGLYTKCFAP 62
+L+ N+++ +P+G F +L + L + N CDC + WL W+K+ Y G+ +C P
Sbjct: 805 SLHGNDISVIPEGAFEDLKSITHLALGSNPLYCDCSMRWLAEWVKKDYVEPGI-ARCMEP 863
Query: 63 SHIKGQNILDIPEHEFKC 80
++ + +L P F+C
Sbjct: 864 PAMRDKLLLTTPASAFQC 881
>gi|307219280|gb|ADN39445.1| RT09974p [Drosophila melanogaster]
Length = 1292
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 176/469 (37%), Positives = 234/469 (49%), Gaps = 70/469 (14%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNNLT LP +F L RLR LR+S+N F CDCHLSWL R+L+ RL YT+C +PS
Sbjct: 190 TLNNNNLTSLPHNIFGGLGRLRALRLSDNPFACDCHLSWLSRFLRSATRLAPYTRCQSPS 249
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+KGQN+ D+ + EFKCSG E EC AE SCPHPCRCADGIVDCREK L VP+ LP
Sbjct: 250 QLKGQNVADLHDQEFKCSGLTEHAPMECGAENSCPHPCRCADGIVDCREKSLTSVPVTLP 309
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TTELRLEQN ITELPPK+F++++RLRRIDLS N IS++A DA GLK LT+L LN+N
Sbjct: 310 DDTTELRLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLLLNDNE 369
Query: 184 LTYL-PDGVFA--------ELFRLRTLRISENSFICDCHLSWLH--------------RW 220
L + DG+F EL R + I N+F H+ L
Sbjct: 370 LGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLG 429
Query: 221 LKRYPRLGLY---TKCFAPS---HIKGQNILDIPEHEFKC------------------SG 256
L + L LY C P H+ L++ + F C
Sbjct: 430 LHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGA 489
Query: 257 SSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKV 316
+ SK+ + H C E G C + CP C C +V C L ++
Sbjct: 490 ARCGAPSKVRDVQIKDLPHSEFKCSSENSEG-CLGDGYCPPSCTCTGTVVRCSRNQLKEI 548
Query: 317 PILLPEATTEL---------------TYMVSIDRVD-----KVLLYSYISNNFKRWTNRS 356
P +P T+EL ++ S+ R+D +L +Y N + + +
Sbjct: 549 PRGIPAETSELYLESNEIEQIHYERIRHLRSLTRLDLSNNQITILSNYTFANLTKLS--T 606
Query: 357 RRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ N + L A + LR + L N I+ LP +F + K L +
Sbjct: 607 LIISYNKLQCLQRHALSGLNNLRVLSLHGNRISMLPEGSFEDLKSLTHI 655
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/277 (43%), Positives = 154/277 (55%), Gaps = 54/277 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L + N IT + + F + LR + L NQI+ + AF+GL L LTLNNNNLT LP
Sbjct: 141 LDISNNVITTVGRRVFKGAQSLRSLQLDNNQITCLDEHAFKGLVELEILTLNNNNLTSLP 200
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
+F L RLR LR+S+N F CDCHLSWL R+L+ RL YT+C +PS +KGQN+ D+
Sbjct: 201 HNIFGGLGRLRALRLSDNPFACDCHLSWLSRFLRSATRLAPYTRCQSPSQLKGQNVADLH 260
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EFKCSG + E EC AE SCPHPCRCADGIVDC
Sbjct: 261 DQEFKCSGLT------------------------EHAPMECGAENSCPHPCRCADGIVDC 296
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
REK L VP+ LP+ TTEL RLEQN ITELP
Sbjct: 297 REKSLTSVPVTLPDDTTEL------------------------------RLEQNFITELP 326
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
PK+F++++RLRRI L N+I+ + A + K+L +
Sbjct: 327 PKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTL 363
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 154/332 (46%), Gaps = 46/332 (13%)
Query: 3 RTLN--NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCF 60
+TLN +N ++ + G F L L +L ++ N F C+CHL+W WL++ G +C
Sbjct: 434 KTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCG 493
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
APS ++ I D+P EFKCS E G C + CP C C +V C L ++P
Sbjct: 494 APSKVRDVQIKDLPHSEFKCSS--ENSEG-CLGDGYCPPSCTCTGTVVRCSRNQLKEIPR 550
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAV--------------- 165
+P T+EL LE N+I ++ + + + L R+DLS NQI+ ++
Sbjct: 551 GIPAETSELYLESNEIEQIHYERIRHLRSLTRLDLSNNQITILSNYTFANLTKLSTLIIS 610
Query: 166 ---------DAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSW 216
A GL +L L+L+ N ++ LP+G F +L L + + N CDC L W
Sbjct: 611 YNKLQCLQRHALSGLNNLRVLSLHGNRISMLPEGSFEDLKSLTHIALGSNPLYCDCGLKW 670
Query: 217 LHRWLK-RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFH 275
W+K Y G+ +C P +K + IL P F C G R+ I +C+ F
Sbjct: 671 FSDWIKLDYVEPGI-ARCAEPEQMKDKLILSTPSSSFVCRG---RVRNDIL-AKCNACF- 724
Query: 276 PYNSCPVEKP---TGECAAEPSCPHPCRCADG 304
E+P +C A P + C C G
Sbjct: 725 -------EQPCQNQAQCVALPQREYQCLCQPG 749
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 8/116 (6%)
Query: 291 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFK 350
E CP C C VDC +GL VP + L + + ++Y +F+
Sbjct: 33 TEARCPRVCSCTGLNVDCSHRGLTSVPRKISADVERL----ELQGNNLTVIY---ETDFQ 85
Query: 351 RWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R T R +L N I + +F + L R+RL N + +P + L R+
Sbjct: 86 RLTKLRMLQLTDNQIHTIERNSFQDLVSLERLRLNNNRLKAIPENFVTSSASLLRL 141
>gi|321468289|gb|EFX79275.1| hypothetical protein DAPPUDRAFT_304927 [Daphnia pulex]
Length = 1467
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 169/459 (36%), Positives = 239/459 (52%), Gaps = 85/459 (18%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLG-------LY 56
TLNNNNLT LP +F L RLR LR+SEN ++CDCHL+WL R+L+R+ R G
Sbjct: 172 TLNNNNLTSLPRDLFEPLSRLRVLRLSENKWLCDCHLAWLGRFLRRHARAGSPLAANGYL 231
Query: 57 TKCFAPSHIKGQNILDIPEHEFKCSG-PVEKPTGECAAEPSCPHPCRCADGIVDCREKGL 115
+C AP ++ + + ++ + EFKC+G E+P+ EC+A+P CP CRCADG+VDCR+K L
Sbjct: 232 PRCHAPFGLRIKAVSELLDTEFKCTGKTAERPSEECSAQPGCPLMCRCADGVVDCRDKSL 291
Query: 116 NKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLT 175
+++P LP++ TELRLEQN ITE+P KAFA YK+L+R+DLS NQIS +A DAF GLKSLT
Sbjct: 292 SRIPPYLPDSATELRLEQNQITEIPAKAFAAYKKLKRVDLSNNQISSIAGDAFHGLKSLT 351
Query: 176 ------------------------S------------------------LTLNNNNLTYL 187
L+L +NN+ +
Sbjct: 352 SLILYGNRITELPAGMFHGLTSLQLLLLNANRISCVRRDSFKDLHNLNLLSLYDNNIPTM 411
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDI 247
+G F L ++TL + N F+CDC+L+WL +L R P +C +P ++ + I +
Sbjct: 412 LNGTFDSLRNIQTLHLGRNPFLCDCYLTWLADYLHRKPVETSGVRCESPRRMQRRRISVL 471
Query: 248 PEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVD 307
+ + +CSG S P+ S P C +PSCP C C IVD
Sbjct: 472 RDEKSRCSGKSSP---------------PFLSPP-------CEDDPSCPTECSCKGTIVD 509
Query: 308 CREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITE 366
C KGL ++P LP TTEL + I R+ ++ + N K L +N I+
Sbjct: 510 CSNKGLKEIPRELPLYTTELILNDNQIVRIKADGMFRDLPNLLK------VDLRRNQISA 563
Query: 367 LPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ AF L + L +N I E+ K F LR +
Sbjct: 564 IENGAFEGANTLVDLNLAENMIQEIHNKMFTGLVSLRTL 602
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 132/397 (33%), Positives = 184/397 (46%), Gaps = 114/397 (28%)
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H+ G D P V K G AA C C+C VDC +GL +VP+ LP
Sbjct: 16 HVAGGGQRDEPARS------VAKGAGSDAAALPCSRLCQCEANAVDCSNRGLTQVPLDLP 69
Query: 124 EATTELRLEQNDITEL------------------------PPKAFANYKRLRRIDLSKNQ 159
+ ++ LE N++T L P FA L+R+DLS NQ
Sbjct: 70 KDADKINLEGNNLTSLLSSDFEGFANLRILRLSNNQLQYIPDLVFATLGHLQRLDLSHNQ 129
Query: 160 ISKVAVDAFQGLKSLTSL------------------------TLNNNNLTYLPDGVFAEL 195
++ V +GL SL +L TLNNNNLT LP +F L
Sbjct: 130 LTAVGKRTLRGLNSLRNLQLDNNQLTCIDEAALRSQKELEILTLNNNNLTSLPRDLFEPL 189
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRL-------GLYTKCFAPSHIKGQNILDIP 248
RLR LR+SEN ++CDCHL+WL R+L+R+ R G +C AP ++ + + ++
Sbjct: 190 SRLRVLRLSENKWLCDCHLAWLGRFLRRHARAGSPLAANGYLPRCHAPFGLRIKAVSELL 249
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EFKC+G + E+P+ EC+A+P CP CRCADG+VDC
Sbjct: 250 DTEFKCTGKT-----------------------AERPSEECSAQPGCPLMCRCADGVVDC 286
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R+K L+++P LP++ TEL RLEQN ITE+P
Sbjct: 287 RDKSLSRIPPYLPDSATEL------------------------------RLEQNQITEIP 316
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
KAFA YK+L+R+ L N I+ + AF K L +
Sbjct: 317 AKAFAAYKKLKRVDLSNNQISSIAGDAFHGLKSLTSL 353
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/450 (28%), Positives = 201/450 (44%), Gaps = 76/450 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +NN+ + +G F L ++TL + N F+CDC+L+WL +L R P +C +P
Sbjct: 402 SLYDNNIPTMLNGTFDSLRNIQTLHLGRNPFLCDCYLTWLADYLHRKPVETSGVRCESPR 461
Query: 64 HIKGQNILDIPEHEFKCSGPVEKP--TGECAAEPSCPHPCRCADGIVDCREKGLNKVPIL 121
++ + I + + + +CSG P + C +PSCP C C IVDC KGL ++P
Sbjct: 462 RMQRRRISVLRDEKSRCSGKSSPPFLSPPCEDDPSCPTECSCKGTIVDCSNKGLKEIPRE 521
Query: 122 LPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN 180
LP TTEL L N I + F + L ++DL +NQIS + AF+G +L L L
Sbjct: 522 LPLYTTELILNDNQIVRIKADGMFRDLPNLLKVDLRRNQISAIENGAFEGANTLVDLNLA 581
Query: 181 NNNLTYLPDGVFAELFRLRTLRISENSFIC------------------------DCHLSW 216
N + + + +F L LRTL + +N C +CH++W
Sbjct: 582 ENMIQEIHNKMFTGLVSLRTLSLFQNKITCVTPGSFDYLRSLTSLNILSNPLHCNCHMAW 641
Query: 217 LHRWLKRYPRLGLYT---KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTD 273
WL++ + L T +C +P+ +K + D+P EF+CS
Sbjct: 642 FGDWLRKKEQ-ELSTGAPRCASPARVKDIPLQDMPSFEFRCS------------------ 682
Query: 274 FHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTE------- 326
E C E CP C C IV C L ++P +P TTE
Sbjct: 683 ---------ELDDQGCLGEDYCPPKCTCTGTIVRCSRAKLREIPKNIPPETTELYLDVNE 733
Query: 327 --------LTYMVSIDRVD-KVLLYSYISNN-FKRWTNRSRRL-EQNDITELPPKAFANY 375
L+++ S+ R+D + S +SNN F T S + N + + AF+
Sbjct: 734 IQSIQSERLSHLRSLTRLDLSNNMVSVLSNNTFVNLTKLSSLIVSYNKLQCVQRNAFSGL 793
Query: 376 KRLRRIRLEQNDITELPPKAFANYKRLRRM 405
LR + L ND++ +P AF + + + +
Sbjct: 794 LSLRILSLHGNDVSMIPEGAFTDLQSITHL 823
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/314 (31%), Positives = 152/314 (48%), Gaps = 38/314 (12%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT---KCF 60
+L N +T + G F L L +L I N C+CH++W WL++ + L T +C
Sbjct: 603 SLFQNKITCVTPGSFDYLRSLTSLNILSNPLHCNCHMAWFGDWLRKKEQ-ELSTGAPRCA 661
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+P+ +K + D+P EF+CS E C E CP C C IV C L ++P
Sbjct: 662 SPARVKDIPLQDMPSFEFRCS---ELDDQGCLGEDYCPPKCTCTGTIVRCSRAKLREIPK 718
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISK------------------ 162
+P TTEL L+ N+I + + ++ + L R+DLS N +S
Sbjct: 719 NIPPETTELYLDVNEIQSIQSERLSHLRSLTRLDLSNNMVSVLSNNTFVNLTKLSSLIVS 778
Query: 163 ------VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSW 216
V +AF GL SL L+L+ N+++ +P+G F +L + L + N F CDC+L W
Sbjct: 779 YNKLQCVQRNAFSGLLSLRILSLHGNDVSMIPEGAFTDLQSITHLALGSNPFYCDCNLRW 838
Query: 217 LHRWLKR-YPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGS-SMETRSKIYREECSTDF 274
L W+KR Y G+ +C P ++ + +L P F+C G S E +K + C T
Sbjct: 839 LAEWVKRDYVEPGI-ARCAEPILLRDKLLLTSPADHFQCKGKISNEVLAKC--DTCYT-- 893
Query: 275 HPYNSCPVEKPTGE 288
P + +PTGE
Sbjct: 894 FPCKNGATCRPTGE 907
>gi|426343942|ref|XP_004038538.1| PREDICTED: slit homolog 2 protein-like [Gorilla gorilla gorilla]
Length = 1347
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 158/435 (36%), Positives = 224/435 (51%), Gaps = 52/435 (11%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 89 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 148
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPS---CPHPCRCADGIVDCREKGLNKVPI 120
H++G N+ ++ + EF CS E A S CP C C++ IVDCR KGL ++P
Sbjct: 149 HLRGHNVAEVQKREFVCSDEEEGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPT 208
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLT-- 178
LPE TE+RLEQN I +PP AF+ YK+LRRIDLS NQIS++A DAFQGL+SL SL+
Sbjct: 209 NLPETITEIRLEQNTIKIIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLSFY 268
Query: 179 ---------------------------LNNNNLTYLPDGVFAELFRLRTLRISENSFICD 211
L NN L + G F+ L ++T+ +++N FICD
Sbjct: 269 GNKCPEPPKSLFEGLFSLQLLKIFFLSLYNNTLQTIAKGTFSPLRAIQTMHLAQNPFICD 328
Query: 212 CHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECS 271
CHL WL +L P +C +P + + I I +F+CS
Sbjct: 329 CHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSAKEQY----------- 377
Query: 272 TDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV 331
F P K +G+C A+ +CP CRC VDC + LNK+P +P+ T EL
Sbjct: 378 --FIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPEHIPQYTAEL---- 431
Query: 332 SIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITE 390
++ + +L + + FK+ R N IT++ AF + I L N +
Sbjct: 432 RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLEN 489
Query: 391 LPPKAFANYKRLRRM 405
+ K F + L+ +
Sbjct: 490 VQHKMFKGLESLKTL 504
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/275 (37%), Positives = 138/275 (50%), Gaps = 51/275 (18%)
Query: 131 LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDG 190
L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 42 LSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVA 101
Query: 191 VFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEH 250
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++ +
Sbjct: 102 SFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQKR 161
Query: 251 EFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCRE 310
EF CS E CS H CP C C++ IVDCR
Sbjct: 162 EFVCSDEE-EGHQSFMAPSCSV-LH-------------------CPAACTCSNNIVDCRG 200
Query: 311 KGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPK 370
KGL ++P LPE TE+ RLEQN I +PP
Sbjct: 201 KGLTEIPTNLPETITEI------------------------------RLEQNTIKIIPPG 230
Query: 371 AFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 231 AFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 265
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 132/463 (28%), Positives = 202/463 (43%), Gaps = 95/463 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L NN L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 295 SLYNNTLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 354
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K +G+C A+ +CP CRC VDC
Sbjct: 355 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSN 414
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG- 170
+ LNK+P +P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 415 QKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGA 474
Query: 171 -----------------------LKSLTS------------------------LTLNNNN 183
L+SL + L+L +N
Sbjct: 475 SGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQ 534
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N F C+C+L+WL WL++ + +C P +K
Sbjct: 535 ITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIP 594
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCA 302
I D+ +F C D + NSC P+ + CP C C
Sbjct: 595 IQDVAIQDFTCD-----------------DGNDDNSCSPLSR----------CPTECTCL 627
Query: 303 DGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQN 362
D +V C KGL +P +P TEL +D L+ +S N+K T L N
Sbjct: 628 DTVVRCSNKGLKVLPKGIPRDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNN 680
Query: 363 DITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I+ L ++F+N +L + L N + +PP+ F K LR +
Sbjct: 681 RISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 723
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 529 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 588
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 589 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPTECTCLDTVVRCSNKGLKVLPKGIP 646
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 647 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 705
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 706 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 765
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 766 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 802
>gi|297292362|ref|XP_002808451.1| PREDICTED: LOW QUALITY PROTEIN: slit homolog 2 protein-like [Macaca
mulatta]
Length = 1468
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 159/453 (35%), Positives = 228/453 (50%), Gaps = 78/453 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPS---CPHPCRCADGIVDCREKGLNKVPI 120
H++G N+ ++ + EF CS E A S CP C C++ IVDCR KGL ++P
Sbjct: 241 HLRGHNVAEVQKREFVCSDEEEGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPT 300
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN 180
LPE TE+RLEQN I +PP AF+ YK+LRRIDLS NQIS++A DAFQGL+SL SL L
Sbjct: 301 NLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLY 360
Query: 181 NNNLTYLP-----------------------------------------------DGVFA 193
N +T LP +G+ +
Sbjct: 361 GNKITELPKSLFEGLFSLQLLFSLLKGKNLKKFSPSPWRKIFFLSLYNNMLQTIANGIVS 420
Query: 194 ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFK 253
L + T+ +++N FICDCHL WL +L P +C +P + + I I +F+
Sbjct: 421 PLRAIHTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFR 480
Query: 254 CSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL 313
CSG+ + RSK+ +G+C A+ +CP CRC VDC + L
Sbjct: 481 CSGTE-DYRSKL--------------------SGDCFADLACPEKCRCEGTTVDCSNQKL 519
Query: 314 NKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAF 372
NK+P +P+ T EL ++ + +L + + FK+ R N IT++ AF
Sbjct: 520 NKIPEHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGAF 573
Query: 373 ANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ I L N + + K F + L+ +
Sbjct: 574 EGASGVNEILLTSNRLENVQHKMFKGLESLKTL 606
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 139/277 (50%), Gaps = 51/277 (18%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 132 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 191
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++
Sbjct: 192 VASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQ 251
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CS E CS H CP C C++ IVDC
Sbjct: 252 KREFVCSDEE-EGHQSFMAPSCSV-LH-------------------CPAACTCSNNIVDC 290
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 291 RGKGLTEIPTNLPETITEI------------------------------RLEQNTIKVIP 320
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 321 PGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 357
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 132/473 (27%), Positives = 203/473 (42%), Gaps = 99/473 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L NN L + +G+ + L + T+ +++N FICDCHL WL +L P +C +P
Sbjct: 405 SLYNNMLQTIANGIVSPLRAIHTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 464
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K +G+C A+ +CP CRC VDC + LNK+P
Sbjct: 465 RLANKRIGQIKSKKFRCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPE 524
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--------- 170
+P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 525 HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILL 584
Query: 171 ---------------LKSLTS------------------------LTLNNNNLTYLPDGV 191
L+SL + L+L +N +T + G
Sbjct: 585 TSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGA 644
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L TL + N F C+C+L+WL WL++ + +C P +K I D+ +
Sbjct: 645 FDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQD 704
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCADGIVDCRE 310
F C D + NSC P+ + CP C C D +V C
Sbjct: 705 FTCD-----------------DGNDDNSCSPLSR----------CPTECTCLDTVVRCSN 737
Query: 311 KGLNKVPILLPEATTELTYMVS---------IDRVDKVLLYSYISNNFKRWTNRSRR--- 358
KGL +P +P TEL Y+ + + L +N +N+S
Sbjct: 738 KGLKVLPKGIPRDVTEL-YLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMT 796
Query: 359 ------LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +PP+ F K LR + L NDI+ +P AF + L +
Sbjct: 797 QLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISAVPEGAFNDLSALSHL 849
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 631 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 690
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 691 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPTECTCLDTVVRCSNKGLKVLPKGIP 748
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 749 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 807
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 808 LRCIPPRTFDGLKSLRLLSLHGNDISAVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 867
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 868 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 904
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQ LK L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRLDLSENQI 139
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF + K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRL 132
>gi|345307889|ref|XP_003428633.1| PREDICTED: slit homolog 3 protein [Ornithorhynchus anatinus]
Length = 1491
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 155/451 (34%), Positives = 225/451 (49%), Gaps = 76/451 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ +P F + ++RTLR+ N CDC L+WL WL++ +G +T C AP
Sbjct: 186 TLNNNNISRIPLTSFNHMPKIRTLRLHSNYLYCDCSLAWLSDWLRQRKSIGQFTFCMAPV 245
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ D+ + E+ C+GP +P SCP C C++ IVDCR KGL ++P LP
Sbjct: 246 HLRGFNVADVQKKEYVCNGPHSEPASCSVNSVSCPSACTCSNNIVDCRGKGLTEIPANLP 305
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +PP AF+ YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N
Sbjct: 306 EGIVEVRLEQNSIKIIPPGAFSQYKKLKRIDISKNQISDIASDAFQGLKSLTSLVLYGNK 365
Query: 184 LT------------------------------------------------YLPDGVFAEL 195
+T + G+FA L
Sbjct: 366 ITEIAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLHNLNLLSLYDNKLQTISKGLFAPL 425
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N F+CDCHL WL +L+ P +C +P + + I I +F+CS
Sbjct: 426 QSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCS 485
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
G+ + RSK +GEC + CP CRC IVDC + L +
Sbjct: 486 GTE-DYRSKF--------------------SGECFMDLVCPDKCRCEGTIVDCSNQKLVR 524
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P LPE T+L ++ D +L + + FK+ N R L N I E+ AF
Sbjct: 525 IPNHLPEYVTDL----RLNDNDISILEA--TGIFKKLPNLRKINLSNNKIKEVREGAFDG 578
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ + L N + + + F L+ M
Sbjct: 579 AAGVQELMLTGNQLESVQGRVFRGLSGLKTM 609
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 130/455 (28%), Positives = 202/455 (44%), Gaps = 82/455 (18%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 408 SLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 467
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K +GEC + CP CRC IVDC + L ++P
Sbjct: 468 RLANKRISQIKSKKFRCSGTEDYRSKFSGECFMDLVCPDKCRCEGTIVDCSNQKLVRIPN 527
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVDA--------- 167
LPE T+LRL NDI+ L F LR+I+LS N+I +V A D
Sbjct: 528 HLPEYVTDLRLNDNDISILEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAAGVQELML 587
Query: 168 ------------FQGLKSLTS------------------------LTLNNNNLTYLPDGV 191
F+GL L + L+L +N +T + G
Sbjct: 588 TGNQLESVQGRVFRGLSGLKTMMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTITPGA 647
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L T+ + N F C+CHL+WL +WL++ + +C P +K I D+ +
Sbjct: 648 FTTLLSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 707
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ + C P CP C C D +V C K
Sbjct: 708 FTCDGNDESS---------------------------CQLAPRCPDHCTCVDSVVRCSNK 740
Query: 312 GLNKVPILLPEATTELTY-MVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPK 370
GL +P +P+ TEL ++ + +L +Y +N + + + L N + +P
Sbjct: 741 GLRALPKGIPKDVTELQLTLIDLSNNSISVLANYTFSNMTQLS--TLILSYNRLRCIPAH 798
Query: 371 AFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
AF + LR + L NDI+ +P +F + L +
Sbjct: 799 AFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHL 833
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 143/294 (48%), Gaps = 57/294 (19%)
Query: 115 LNKVPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL + T T L L +N I +P KAF ++ + L NQIS + AF+ L
Sbjct: 120 LQVLPELLFQNTLKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNQISCIEDGAFRAL 179
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ +P F + ++RTLR+ N CDC L+WL WL++ +G +T
Sbjct: 180 RDLEILTLNNNNISRIPLTSFNHMPKIRTLRLHSNYLYCDCSLAWLSDWLRQRKSIGQFT 239
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
C AP H++G N+ D+ + E+ C+G P +P
Sbjct: 240 FCMAPVHLRGFNVADVQKKEYVCNG------------------------PHSEPASCSVN 275
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++ IVDCR KGL ++P LPE E+
Sbjct: 276 SVSCPSACTCSNNIVDCRGKGLTEIPANLPEGIVEV------------------------ 311
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +PP AF+ YK+L+RI + +N I+++ AF K L +
Sbjct: 312 ------RLEQNSIKIIPPGAFSQYKKLKRIDISKNQISDIASDAFQGLKSLTSL 359
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%)
Query: 131 LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDG 190
L++N+IT + FA K LR + L NQ+S + AFQ LK L L LN N L LP+
Sbjct: 67 LDRNNITRITKTDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPEL 126
Query: 191 VFAELFRLRTLRISENSF 208
+F +L L +SEN
Sbjct: 127 LFQNTLKLTRLDLSENQI 144
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 136 ITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+ PP+ A+ + + DL +N I+++ F GLK+L L L +N ++ + G F +L
Sbjct: 49 ISTSPPE-LASLSLVAQRDLDRNNITRITKTDFAGLKNLRVLHLEDNQVSVIERGAFQDL 107
Query: 196 FRLRTLRISENSF 208
+L LR+++N
Sbjct: 108 KQLERLRLNKNKL 120
>gi|440903534|gb|ELR54180.1| Slit-like protein 1 protein, partial [Bos grunniens mutus]
Length = 1396
Score = 263 bits (673), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 157/453 (34%), Positives = 230/453 (50%), Gaps = 72/453 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 49 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 108
Query: 64 HIKGQNILDIPEHEFKCSGPVEKP-TGECA-AEPSCPHPCRCADGIVDCREKGLNKVPIL 121
++G N+ ++ + EF CSG E T C + SCP C C++GIVDCR KGL +P
Sbjct: 109 GLRGLNVAEVQKSEFSCSGQGEAGRTPSCTLSSGSCPAMCACSNGIVDCRGKGLTAIPAN 168
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
LPEA TE+RLE N I +PP AF+ Y++LRRIDLS NQIS++A DAFQGL+SL SL L
Sbjct: 169 LPEAMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYG 228
Query: 182 NNLTYLPDGVFA------------------------------------------------ 193
N +T LP GVF
Sbjct: 229 NKITDLPQGVFGGLFTLQLLLLNANKINCIRLDAFQDLQNLSLLSLYDNKIQSLAKGTFT 288
Query: 194 ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFK 253
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I +F+
Sbjct: 289 SLRAIQTLHLAQNPFICDCNLKWLADFLRSNPIETSGARCASPRRLANKRIGQIKSKKFR 348
Query: 254 CSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL 313
CS Y + D+ NS EC ++ CPH CRC +V+C L
Sbjct: 349 CSAKEQ------YFIPGAEDYQ-LNS--------ECNSDVVCPHKCRCEASMVECSSLKL 393
Query: 314 NKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPPKAF 372
K+P +P+AT EL ++ + +L + + FK+ T+ + L N ++E+ AF
Sbjct: 394 TKIPERMPQATAEL----RLNNNEISILEA--TGMFKKLTHLKKINLSNNKVSEIEDGAF 447
Query: 373 ANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L N + + F + LR +
Sbjct: 448 EGAASVSELHLTANQLESIRSGMFRGLEGLRTL 480
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/275 (36%), Positives = 141/275 (51%), Gaps = 52/275 (18%)
Query: 131 LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDG 190
L +N I +P KAF L+ + L KNQI + AF+ L+ L LTLNNNN+T +P
Sbjct: 2 LSENTIQAIPRKAFRGATDLKNLQLDKNQIGCIEEGAFRALRGLEVLTLNNNNITTIPVS 61
Query: 191 VFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEH 250
F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+ ++G N+ ++ +
Sbjct: 62 SFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPAGLRGLNVAEVQKS 121
Query: 251 EFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCRE 310
EF CSG R+ SC + + SCP C C++GIVDCR
Sbjct: 122 EFSCSGQGEAGRTP--------------SCTL--------SSGSCPAMCACSNGIVDCRG 159
Query: 311 KGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPK 370
KGL +P LPEA TE+ RLE N I +PP
Sbjct: 160 KGLTAIPANLPEAMTEI------------------------------RLELNGIKSIPPG 189
Query: 371 AFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
AF+ Y++LRRI L N I+E+ P AF + L +
Sbjct: 190 AFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSL 224
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 191/451 (42%), Gaps = 91/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 273 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRSNPIETSGARCASPR 332
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + EC ++ CPH CRC +V+C
Sbjct: 333 RLANKRIGQIKSKKFRCSAKEQYFIPGAEDYQLNSECNSDVVCPHKCRCEASMVECSSLK 392
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L K+P +P+AT ELRL N+I+ L F L++I+LS N++S++ AF+G
Sbjct: 393 LTKIPERMPQATAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAAS 452
Query: 171 ---------------------LKSLTSLTLNNNNLTYLPD-------------------- 189
L+ L +L L NN ++ + +
Sbjct: 453 VSELHLTANQLESIRSGMFRGLEGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIA 512
Query: 190 ----GVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
G F L L TL + N F C+C L+WL WL++ + +C P ++ +
Sbjct: 513 TISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQ 572
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E G C P CP C C D +
Sbjct: 573 DVASPDFRCEEGQEE--------------------------GGCLPRPQCPQECACLDTV 606
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L +P +P+ TEL +D L+ + +S FK + L N I+
Sbjct: 607 VRCSNKHLQTLPKGIPKNVTELY----LDGNQFTLVPAQLS-TFKYL--QLVDLSNNKIS 659
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L +F N +L + L N + +PP AF
Sbjct: 660 SLSNSSFTNMSQLTTLILSYNSLQCIPPLAF 690
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 151/325 (46%), Gaps = 36/325 (11%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + + G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 505 SLYDNQIATISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPD 564
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ G C P CP C C D +V C K L +P +P
Sbjct: 565 FLRQIPLQDVASPDFRCEEGQEE--GGCLPRPQCPQECACLDTVVRCSNKHLQTLPKGIP 622
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TEL L+ N T L P + +K L+ +DLS N+IS ++ +F + LT+L L+ N+
Sbjct: 623 KNVTELYLDGNQFT-LVPAQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNS 681
Query: 184 LTYLP------------------------DGVFAELFRLRTLRISENSFICDCHLSWLHR 219
L +P +G+FA++ L L I N CDCHL WL
Sbjct: 682 LQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSS 741
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
W+K + +C P ++G+ +L P +F+C G+ T + +C P S
Sbjct: 742 WVKTGYKEPGIARCAGPPDMEGKLLLTTPAKKFECQGTPTLT----VQAKCD----PCLS 793
Query: 280 CPVEKPTGECAAEPSCPHPCRCADG 304
P + G C +P + C C G
Sbjct: 794 SPCQN-QGTCRNDPLVGYRCACPSG 817
>gi|297490818|ref|XP_002698459.1| PREDICTED: slit homolog 1 protein [Bos taurus]
gi|296472756|tpg|DAA14871.1| TPA: slit homolog 1 protein-like [Bos taurus]
Length = 1534
Score = 263 bits (673), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 157/453 (34%), Positives = 230/453 (50%), Gaps = 72/453 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 187 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEKP-TGECA-AEPSCPHPCRCADGIVDCREKGLNKVPIL 121
++G N+ ++ + EF CSG E T C + SCP C C++GIVDCR KGL +P
Sbjct: 247 GLRGLNVAEVQKSEFSCSGQGEAGRTPSCTLSSGSCPAMCACSNGIVDCRGKGLTAIPAN 306
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
LPEA TE+RLE N I +PP AF+ Y++LRRIDLS NQIS++A DAFQGL+SL SL L
Sbjct: 307 LPEAMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYG 366
Query: 182 NNLTYLPDGVFA------------------------------------------------ 193
N +T LP GVF
Sbjct: 367 NKITDLPQGVFGGLFTLQLLLLNANKINCIRLDAFQDLQNLSLLSLYDNKIQSLAKGTFT 426
Query: 194 ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFK 253
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I +F+
Sbjct: 427 SLRAIQTLHLAQNPFICDCNLKWLADFLRSNPIETSGARCASPRRLANKRIGQIKSKKFR 486
Query: 254 CSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL 313
CS Y + D+ NS EC ++ CPH CRC +V+C L
Sbjct: 487 CSAKEQ------YFIPGAEDYQ-LNS--------ECNSDVVCPHKCRCEASMVECSSLKL 531
Query: 314 NKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPPKAF 372
K+P +P+AT EL ++ + +L + + FK+ T+ + L N ++E+ AF
Sbjct: 532 TKIPERVPQATAEL----RLNNNEISILEA--TGMFKKLTHLKKINLSNNKVSEIEDGAF 585
Query: 373 ANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L N + + F + LR +
Sbjct: 586 EGAASVSELHLTANQLESIRSGMFRGLEGLRTL 618
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 106/294 (36%), Positives = 151/294 (51%), Gaps = 55/294 (18%)
Query: 115 LNKVPILL---PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L+ +P LL +A + L L +N I +P KAF L+ + L KNQI + AF+ L
Sbjct: 121 LHTLPELLFQNNQALSRLDLSENTIQAIPRKAFRGATDLKNLQLDKNQIGCIEEGAFRAL 180
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T
Sbjct: 181 RGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFT 240
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C P+ ++G N+ ++ + EF CSG R+ SC + +
Sbjct: 241 QCSGPAGLRGLNVAEVQKSEFSCSGQGEAGRTP--------------SCTL--------S 278
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++GIVDCR KGL +P LPEA TE+
Sbjct: 279 SGSCPAMCACSNGIVDCRGKGLTAIPANLPEAMTEI------------------------ 314
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLE N I +PP AF+ Y++LRRI L N I+E+ P AF + L +
Sbjct: 315 ------RLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSL 362
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 191/451 (42%), Gaps = 91/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 411 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRSNPIETSGARCASPR 470
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + EC ++ CPH CRC +V+C
Sbjct: 471 RLANKRIGQIKSKKFRCSAKEQYFIPGAEDYQLNSECNSDVVCPHKCRCEASMVECSSLK 530
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L K+P +P+AT ELRL N+I+ L F L++I+LS N++S++ AF+G
Sbjct: 531 LTKIPERVPQATAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAAS 590
Query: 171 ---------------------LKSLTSLTLNNNNLTYLPD-------------------- 189
L+ L +L L NN ++ + +
Sbjct: 591 VSELHLTANQLESIRSGMFRGLEGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIA 650
Query: 190 ----GVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
G F L L TL + N F C+C L+WL WL++ + +C P ++ +
Sbjct: 651 TISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQ 710
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E G C P CP C C D +
Sbjct: 711 DVASPDFRCEEGQEE--------------------------GGCLPRPQCPQECACLDTV 744
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L +P +P+ TEL +D L+ + +S FK + L N I+
Sbjct: 745 VRCSNKHLQTLPKGIPKNVTELY----LDGNQFTLVPAQLS-TFKYL--QLVDLSNNKIS 797
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L +F N +L + L N + +PP AF
Sbjct: 798 SLSNSSFTNMSQLTTLILSYNSLQCIPPLAF 828
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 150/325 (46%), Gaps = 36/325 (11%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + + G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 643 SLYDNQIATISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPD 702
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ G C P CP C C D +V C K L +P +P
Sbjct: 703 FLRQIPLQDVASPDFRCEEGQEE--GGCLPRPQCPQECACLDTVVRCSNKHLQTLPKGIP 760
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TEL L+ N T L P + +K L+ +DLS N+IS ++ +F + LT+L L+ N+
Sbjct: 761 KNVTELYLDGNQFT-LVPAQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNS 819
Query: 184 LTYLP------------------------DGVFAELFRLRTLRISENSFICDCHLSWLHR 219
L +P +G+FA++ L L I N CDCHL WL
Sbjct: 820 LQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSS 879
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
W+K + +C P ++G+ +L P +F+C G T + +C P S
Sbjct: 880 WVKTGYKEPGIARCAGPLDMEGKLLLTTPAKKFECQGPPTLT----VQAKCD----PCLS 931
Query: 280 CPVEKPTGECAAEPSCPHPCRCADG 304
P + G C +P + C C G
Sbjct: 932 SPCQN-QGTCRNDPLVGYRCACPSG 955
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 57/113 (50%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
CP C CA VDC GL VP +P T L L N+IT + FA K+LR + L
Sbjct: 33 GCPALCTCAGTTVDCHGTGLRAVPKNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQL 92
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+NQI V AF +K L L LN N L LP+ +F L L +SEN+
Sbjct: 93 MENQIGVVERGAFDDMKELERLRLNRNLLHTLPELLFQNNQALSRLDLSENTI 145
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNNFKRW 352
CP C CA VDC GL VP +P T L +I R+ K N+F
Sbjct: 33 GCPALCTCAGTTVDCHGTGLRAVPKNIPRNTERLELNGNNITRIHK--------NDFAGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I + AF + K L R+RL +N + LP F N + L R+
Sbjct: 85 KQLRVLQLMENQIGVVERGAFDDMKELERLRLNRNLLHTLPELLFQNNQALSRL 138
>gi|148709912|gb|EDL41858.1| slit homolog 1 (Drosophila), isoform CRA_a [Mus musculus]
Length = 1537
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 155/458 (33%), Positives = 230/458 (50%), Gaps = 82/458 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 193 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 252
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEP-------SCPHPCRCADGIVDCREKGLN 116
++G N+ ++ + EF CSG GE A P SCP C C+ GIVDCR KGL
Sbjct: 253 SLRGLNVAEVQKGEFSCSG-----QGEAAGAPACTLSSGSCPAMCSCSSGIVDCRGKGLT 307
Query: 117 KVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
+P LPE TE+RLE N I +PP AF+ Y++LRRIDLS NQI+++A DAFQGL+SL S
Sbjct: 308 AIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNS 367
Query: 177 LTLNNNNLTYLPDGVFA------------------------------------------- 193
L L N +T LP GVF
Sbjct: 368 LVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLA 427
Query: 194 -----ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I
Sbjct: 428 KGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETTGARCASPRRLANKRIGQIK 487
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+F+CS Y + D+H NS EC ++ +CPH CRC +V+C
Sbjct: 488 SKKFRCSAKEQ------YFIPGTEDYH-LNS--------ECTSDVACPHKCRCEASVVEC 532
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITEL 367
L+K+P +P++TTEL ++ + +L + + FK+ ++ + L N ++E+
Sbjct: 533 SSLKLSKIPERIPQSTTEL----RLNNNEISILEA--TGLFKKLSHLKKINLSNNKVSEI 586
Query: 368 PPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + + L N + + F LR +
Sbjct: 587 EDGTFEGAASVSELHLTANQLESIRSGMFRGLDGLRTL 624
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 101/295 (34%), Positives = 141/295 (47%), Gaps = 72/295 (24%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRID------LSKNQISKVAVDAFQGLKSLTSL 177
+A + L L +N + +P KAF L+ + L KN+IS + AF+ L+ L L
Sbjct: 133 QALSRLDLSENFLQAVPRKAFRGATDLKNLSPLLYRQLDKNRISCIEEGAFRALRGLEVL 192
Query: 178 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 237
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 193 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 252
Query: 238 HIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEP---- 293
++G N+ ++ + EF CSG GE A P
Sbjct: 253 SLRGLNVAEVQKGEFSCSGQ-----------------------------GEAAGAPACTL 283
Query: 294 ---SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFK 350
SCP C C+ GIVDCR KGL +P LPE TE+
Sbjct: 284 SSGSCPAMCSCSSGIVDCRGKGLTAIPANLPETMTEI----------------------- 320
Query: 351 RWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLE N I +PP AF+ Y++LRRI L N I E+ P AF + L +
Sbjct: 321 -------RLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSL 368
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 190/451 (42%), Gaps = 91/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 417 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETTGARCASPR 476
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + EC ++ +CPH CRC +V+C
Sbjct: 477 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYHLNSECTSDVACPHKCRCEASVVECSSLK 536
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L+K+P +P++TTELRL N+I+ L F L++I+LS N++S++ F+G
Sbjct: 537 LSKIPERIPQSTTELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGAAS 596
Query: 171 ---------------------LKSLTSLTLNN------------------------NNLT 185
L L +L L N N++T
Sbjct: 597 VSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHIT 656
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+CHLSWL WL++ + +C P ++ +
Sbjct: 657 TISPGAFDTLQALSTLNLLANPFNCNCHLSWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQ 716
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E C P CP C C D +
Sbjct: 717 DVAFPDFRCEEGQEEV--------------------------GCLPRPQCPQECACLDTV 750
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L +P +P+ TEL +D L+ +S FK + L N I+
Sbjct: 751 VRCSNKHLQALPKGIPKNVTELY----LDGNQFTLVPGQLS-TFKYL--QLVDLSNNKIS 803
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L +F N +L + L N + +PP AF
Sbjct: 804 SLSNSSFTNMSQLTTLILSYNALQCIPPLAF 834
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 134/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N++T + G F L L TL + N F C+CHLSWL WL++ + +C P
Sbjct: 649 SLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCHLSWLGDWLRKRKIVTGNPRCQNPD 708
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ C P CP C C D +V C K L +P +P
Sbjct: 709 FLRQIPLQDVAFPDFRCEEGQEEVG--CLPRPQCPQECACLDTVVRCSNKHLQALPKGIP 766
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TEL L+ N T L P + +K L+ +DLS N+IS ++ +F + LT+L L+ N
Sbjct: 767 KNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 825
Query: 184 LTYLP------------------------DGVFAELFRLRTLRISENSFICDCHLSWLHR 219
L +P +G+FA++ L L I N CDC L WL
Sbjct: 826 LQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCRLRWLSS 885
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 886 WVKTGYKEPGIARCAGPPEMEGKLLLTTPAKKFECQG 922
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 56/111 (50%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDC GL +P +P T L L N+IT + FA K+LR + L
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQL 92
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
+NQI V AF +K L L LN N L LP+ +F L L +SEN
Sbjct: 93 MENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSEN 143
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C VDC GL +P +P T L + I R+ K N+F
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHK--------NDFAGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I + AF + K L R+RL +N + LP F N + L R+
Sbjct: 85 KQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRL 138
>gi|28972409|dbj|BAC65658.1| mKIAA0813 protein [Mus musculus]
Length = 1557
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 155/458 (33%), Positives = 230/458 (50%), Gaps = 82/458 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 213 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 272
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEP-------SCPHPCRCADGIVDCREKGLN 116
++G N+ ++ + EF CSG GE A P SCP C C+ GIVDCR KGL
Sbjct: 273 SLRGLNVAEVQKGEFSCSG-----QGEAAGAPACTLSSGSCPAMCSCSSGIVDCRGKGLT 327
Query: 117 KVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
+P LPE TE+RLE N I +PP AF+ Y++LRRIDLS NQI+++A DAFQGL+SL S
Sbjct: 328 AIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNS 387
Query: 177 LTLNNNNLTYLPDGVFA------------------------------------------- 193
L L N +T LP GVF
Sbjct: 388 LVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLA 447
Query: 194 -----ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I
Sbjct: 448 KGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETTGARCASPRRLANKRIGQIK 507
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+F+CS Y + D+H NS EC ++ +CPH CRC +V+C
Sbjct: 508 SKKFRCSAKEQ------YFIPGTEDYH-LNS--------ECTSDVACPHKCRCEASVVEC 552
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITEL 367
L+K+P +P++TTEL ++ + +L + + FK+ ++ + L N ++E+
Sbjct: 553 SSLKLSKIPERIPQSTTEL----RLNNNEISILEA--TGLFKKLSHLKKINLSNNKVSEI 606
Query: 368 PPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + + L N + + F LR +
Sbjct: 607 EDGTFEGAASVSELHLTANQLESIRSGMFRGLDGLRTL 644
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 101/289 (34%), Positives = 141/289 (48%), Gaps = 66/289 (22%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+A + L L +N + +P KAF L+ + L KN+IS + AF+ L+ L LTLNNNN
Sbjct: 159 QALSRLDLSENFLQAVPRKAFRGATDLKNLQLDKNRISCIEEGAFRALRGLEVLTLNNNN 218
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+ ++G N
Sbjct: 219 ITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLN 278
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEP-------SCP 296
+ ++ + EF CSG GE A P SCP
Sbjct: 279 VAEVQKGEFSCSGQ-----------------------------GEAAGAPACTLSSGSCP 309
Query: 297 HPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRS 356
C C+ GIVDCR KGL +P LPE TE+
Sbjct: 310 AMCSCSSGIVDCRGKGLTAIPANLPETMTEI----------------------------- 340
Query: 357 RRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLE N I +PP AF+ Y++LRRI L N I E+ P AF + L +
Sbjct: 341 -RLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSL 388
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 190/451 (42%), Gaps = 91/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 437 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETTGARCASPR 496
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + EC ++ +CPH CRC +V+C
Sbjct: 497 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYHLNSECTSDVACPHKCRCEASVVECSSLK 556
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L+K+P +P++TTELRL N+I+ L F L++I+LS N++S++ F+G
Sbjct: 557 LSKIPERIPQSTTELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGAAS 616
Query: 171 ---------------------LKSLTSLTLNN------------------------NNLT 185
L L +L L N N++T
Sbjct: 617 VSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHIT 676
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+CHLSWL WL++ + +C P ++ +
Sbjct: 677 TISPGAFDTLQALSTLNLLANPFNCNCHLSWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQ 736
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E C P CP C C D +
Sbjct: 737 DVAFPDFRCEEGQEEV--------------------------GCLPRPQCPQECACLDTV 770
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L +P +P+ TEL +D L+ +S FK + L N I+
Sbjct: 771 VRCSNKHLQALPKGIPKNVTELY----LDGNQFTLVPGQLS-TFKYL--QLVDLSNNKIS 823
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L +F N +L + L N + +PP AF
Sbjct: 824 SLSNSSFTNMSQLTTLILSYNALQCIPPLAF 854
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 134/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N++T + G F L L TL + N F C+CHLSWL WL++ + +C P
Sbjct: 669 SLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCHLSWLGDWLRKRKIVTGNPRCQNPD 728
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ C P CP C C D +V C K L +P +P
Sbjct: 729 FLRQIPLQDVAFPDFRCEEGQEEVG--CLPRPQCPQECACLDTVVRCSNKHLQALPKGIP 786
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TEL L+ N T L P + +K L+ +DLS N+IS ++ +F + LT+L L+ N
Sbjct: 787 KNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 845
Query: 184 LTYLP------------------------DGVFAELFRLRTLRISENSFICDCHLSWLHR 219
L +P +G+FA++ L L I N CDC L WL
Sbjct: 846 LQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCRLRWLSS 905
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 906 WVKTGYKEPGIARCAGPPEMEGKLLLTTPAKKFECQG 942
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 56/111 (50%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDC GL +P +P T L L N+IT + FA K+LR + L
Sbjct: 59 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQL 118
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
+NQI V AF +K L L LN N L LP+ +F L L +SEN
Sbjct: 119 MENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSEN 169
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C VDC GL +P +P T L + I R+ K N+F
Sbjct: 59 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHK--------NDFAGL 110
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I + AF + K L R+RL +N + LP F N + L R+
Sbjct: 111 KQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRL 164
>gi|34783720|gb|AAH57131.1| Slit homolog 1 (Drosophila) [Mus musculus]
gi|38328399|gb|AAH62091.1| Slit homolog 1 (Drosophila) [Mus musculus]
Length = 1530
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 155/458 (33%), Positives = 230/458 (50%), Gaps = 82/458 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 186 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 245
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEP-------SCPHPCRCADGIVDCREKGLN 116
++G N+ ++ + EF CSG GE A P SCP C C+ GIVDCR KGL
Sbjct: 246 SLRGLNVAEVQKGEFSCSG-----QGEAAGAPACTLSSGSCPAMCSCSSGIVDCRGKGLT 300
Query: 117 KVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
+P LPE TE+RLE N I +PP AF+ Y++LRRIDLS NQI+++A DAFQGL+SL S
Sbjct: 301 AIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNS 360
Query: 177 LTLNNNNLTYLPDGVFA------------------------------------------- 193
L L N +T LP GVF
Sbjct: 361 LVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLA 420
Query: 194 -----ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I
Sbjct: 421 KGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETTGARCASPRRLANKRIGQIK 480
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+F+CS Y + D+H NS EC ++ +CPH CRC +V+C
Sbjct: 481 SKKFRCSAKEQ------YFIPGTEDYH-LNS--------ECTSDVACPHKCRCEASVVEC 525
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITEL 367
L+K+P +P++TTEL ++ + +L + + FK+ ++ + L N ++E+
Sbjct: 526 SSLKLSKIPERIPQSTTEL----RLNNNEISILEA--TGLFKKLSHLKKINLSNNKVSEI 579
Query: 368 PPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + + L N + + F LR +
Sbjct: 580 EDGTFEGAASVSELHLTANQLESIRSGMFRGLDGLRTL 617
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 101/289 (34%), Positives = 141/289 (48%), Gaps = 66/289 (22%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+A + L L +N + +P KAF L+ + L KN+IS + AF+ L+ L LTLNNNN
Sbjct: 132 QALSRLDLSENFLQAVPRKAFRGATDLKNLQLDKNRISCIEEGAFRALRGLEVLTLNNNN 191
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+ ++G N
Sbjct: 192 ITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLN 251
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEP-------SCP 296
+ ++ + EF CSG GE A P SCP
Sbjct: 252 VAEVQKGEFSCSGQ-----------------------------GEAAGAPACTLSSGSCP 282
Query: 297 HPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRS 356
C C+ GIVDCR KGL +P LPE TE+
Sbjct: 283 AMCSCSSGIVDCRGKGLTAIPANLPETMTEI----------------------------- 313
Query: 357 RRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLE N I +PP AF+ Y++LRRI L N I E+ P AF + L +
Sbjct: 314 -RLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSL 361
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 190/451 (42%), Gaps = 91/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 410 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETTGARCASPR 469
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + EC ++ +CPH CRC +V+C
Sbjct: 470 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYHLNSECTSDVACPHKCRCEASVVECSSLK 529
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L+K+P +P++TTELRL N+I+ L F L++I+LS N++S++ F+G
Sbjct: 530 LSKIPERIPQSTTELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGAAS 589
Query: 171 ---------------------LKSLTSLTLNN------------------------NNLT 185
L L +L L N N++T
Sbjct: 590 VSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHIT 649
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+CHLSWL WL++ + +C P ++ +
Sbjct: 650 TISPGAFDTLQALSTLNLLANPFNCNCHLSWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQ 709
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E C P CP C C D +
Sbjct: 710 DVAFPDFRCEEGQEEV--------------------------GCLPRPQCPQECACLDTV 743
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L +P +P+ TEL +D L+ +S FK + L N I+
Sbjct: 744 VRCSNKHLQALPKGIPKNVTELY----LDGNQFTLVPGQLS-TFKYL--QLVDLSNNKIS 796
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L +F N +L + L N + +PP AF
Sbjct: 797 SLSNSSFTNMSQLTTLILSYNALQCIPPLAF 827
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 134/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N++T + G F L L TL + N F C+CHLSWL WL++ + +C P
Sbjct: 642 SLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCHLSWLGDWLRKRKIVTGNPRCQNPD 701
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ C P CP C C D +V C K L +P +P
Sbjct: 702 FLRQIPLQDVAFPDFRCEEGQEEVG--CLPRPQCPQECACLDTVVRCSNKHLQALPKGIP 759
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TEL L+ N T L P + +K L+ +DLS N+IS ++ +F + LT+L L+ N
Sbjct: 760 KNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 818
Query: 184 LTYLP------------------------DGVFAELFRLRTLRISENSFICDCHLSWLHR 219
L +P +G+FA++ L L I N CDC L WL
Sbjct: 819 LQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCRLRWLSS 878
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 879 WVKTGYKEPGIARCAGPPEMEGKLLLTTPAKKFECQG 915
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C G VDC GL +P +P T L L N+IT + FA K+LR + L
Sbjct: 33 ACPALCTCT-GTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQL 91
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
+NQI V AF +K L L LN N L LP+ +F L L +SEN
Sbjct: 92 MENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSEN 142
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 52/114 (45%), Gaps = 11/114 (9%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C G VDC GL +P +P T L + I R+ K N+F
Sbjct: 33 ACPALCTCT-GTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHK--------NDFAGL 83
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I + AF + K L R+RL +N + LP F N + L R+
Sbjct: 84 KQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRL 137
>gi|256355216|ref|NP_056563.2| slit homolog 1 protein precursor [Mus musculus]
gi|45477282|sp|Q80TR4.2|SLIT1_MOUSE RecName: Full=Slit homolog 1 protein; Short=Slit-1; Flags:
Precursor
Length = 1531
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 155/458 (33%), Positives = 230/458 (50%), Gaps = 82/458 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 187 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEP-------SCPHPCRCADGIVDCREKGLN 116
++G N+ ++ + EF CSG GE A P SCP C C+ GIVDCR KGL
Sbjct: 247 SLRGLNVAEVQKGEFSCSG-----QGEAAGAPACTLSSGSCPAMCSCSSGIVDCRGKGLT 301
Query: 117 KVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
+P LPE TE+RLE N I +PP AF+ Y++LRRIDLS NQI+++A DAFQGL+SL S
Sbjct: 302 AIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNS 361
Query: 177 LTLNNNNLTYLPDGVFA------------------------------------------- 193
L L N +T LP GVF
Sbjct: 362 LVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLA 421
Query: 194 -----ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I
Sbjct: 422 KGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETTGARCASPRRLANKRIGQIK 481
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+F+CS Y + D+H NS EC ++ +CPH CRC +V+C
Sbjct: 482 SKKFRCSAKEQ------YFIPGTEDYH-LNS--------ECTSDVACPHKCRCEASVVEC 526
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITEL 367
L+K+P +P++TTEL ++ + +L + + FK+ ++ + L N ++E+
Sbjct: 527 SSLKLSKIPERIPQSTTEL----RLNNNEISILEA--TGLFKKLSHLKKINLSNNKVSEI 580
Query: 368 PPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + + L N + + F LR +
Sbjct: 581 EDGTFEGAASVSELHLTANQLESIRSGMFRGLDGLRTL 618
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 101/289 (34%), Positives = 141/289 (48%), Gaps = 66/289 (22%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+A + L L +N + +P KAF L+ + L KN+IS + AF+ L+ L LTLNNNN
Sbjct: 133 QALSRLDLSENFLQAVPRKAFRGATDLKNLQLDKNRISCIEEGAFRALRGLEVLTLNNNN 192
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+ ++G N
Sbjct: 193 ITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLN 252
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEP-------SCP 296
+ ++ + EF CSG GE A P SCP
Sbjct: 253 VAEVQKGEFSCSGQ-----------------------------GEAAGAPACTLSSGSCP 283
Query: 297 HPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRS 356
C C+ GIVDCR KGL +P LPE TE+
Sbjct: 284 AMCSCSSGIVDCRGKGLTAIPANLPETMTEI----------------------------- 314
Query: 357 RRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLE N I +PP AF+ Y++LRRI L N I E+ P AF + L +
Sbjct: 315 -RLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSL 362
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 190/451 (42%), Gaps = 91/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 411 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETTGARCASPR 470
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + EC ++ +CPH CRC +V+C
Sbjct: 471 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYHLNSECTSDVACPHKCRCEASVVECSSLK 530
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L+K+P +P++TTELRL N+I+ L F L++I+LS N++S++ F+G
Sbjct: 531 LSKIPERIPQSTTELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGAAS 590
Query: 171 ---------------------LKSLTSLTLNN------------------------NNLT 185
L L +L L N N++T
Sbjct: 591 VSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHIT 650
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+CHLSWL WL++ + +C P ++ +
Sbjct: 651 TISPGAFDTLQALSTLNLLANPFNCNCHLSWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQ 710
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E C P CP C C D +
Sbjct: 711 DVAFPDFRCEEGQEEV--------------------------GCLPRPQCPQECACLDTV 744
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L +P +P+ TEL +D L+ +S FK + L N I+
Sbjct: 745 VRCSNKHLQALPKGIPKNVTELY----LDGNQFTLVPGQLS-TFKYL--QLVDLSNNKIS 797
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L +F N +L + L N + +PP AF
Sbjct: 798 SLSNSSFTNMSQLTTLILSYNALQCIPPLAF 828
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 134/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N++T + G F L L TL + N F C+CHLSWL WL++ + +C P
Sbjct: 643 SLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCHLSWLGDWLRKRKIVTGNPRCQNPD 702
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ C P CP C C D +V C K L +P +P
Sbjct: 703 FLRQIPLQDVAFPDFRCEEGQEEVG--CLPRPQCPQECACLDTVVRCSNKHLQALPKGIP 760
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TEL L+ N T L P + +K L+ +DLS N+IS ++ +F + LT+L L+ N
Sbjct: 761 KNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 819
Query: 184 LTYLP------------------------DGVFAELFRLRTLRISENSFICDCHLSWLHR 219
L +P +G+FA++ L L I N CDC L WL
Sbjct: 820 LQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCRLRWLSS 879
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 880 WVKTGYKEPGIARCAGPPEMEGKLLLTTPAKKFECQG 916
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 56/111 (50%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDC GL +P +P T L L N+IT + FA K+LR + L
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQL 92
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
+NQI V AF +K L L LN N L LP+ +F L L +SEN
Sbjct: 93 MENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSEN 143
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C VDC GL +P +P T L + I R+ K N+F
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHK--------NDFAGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I + AF + K L R+RL +N + LP F N + L R+
Sbjct: 85 KQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRL 138
>gi|148709913|gb|EDL41859.1| slit homolog 1 (Drosophila), isoform CRA_b [Mus musculus]
Length = 1557
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 155/458 (33%), Positives = 230/458 (50%), Gaps = 82/458 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 213 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 272
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEP-------SCPHPCRCADGIVDCREKGLN 116
++G N+ ++ + EF CSG GE A P SCP C C+ GIVDCR KGL
Sbjct: 273 SLRGLNVAEVQKGEFSCSG-----QGEAAGAPACTLSSGSCPAMCSCSSGIVDCRGKGLT 327
Query: 117 KVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
+P LPE TE+RLE N I +PP AF+ Y++LRRIDLS NQI+++A DAFQGL+SL S
Sbjct: 328 AIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNS 387
Query: 177 LTLNNNNLTYLPDGVFA------------------------------------------- 193
L L N +T LP GVF
Sbjct: 388 LVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLA 447
Query: 194 -----ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I
Sbjct: 448 KGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETTGARCASPRRLANKRIGQIK 507
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+F+CS Y + D+H NS EC ++ +CPH CRC +V+C
Sbjct: 508 SKKFRCSAKEQ------YFIPGTEDYH-LNS--------ECTSDVACPHKCRCEASVVEC 552
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITEL 367
L+K+P +P++TTEL ++ + +L + + FK+ ++ + L N ++E+
Sbjct: 553 SSLKLSKIPERIPQSTTEL----RLNNNEISILEA--TGLFKKLSHLKKINLSNNKVSEI 606
Query: 368 PPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + + L N + + F LR +
Sbjct: 607 EDGTFEGAASVSELHLTANQLESIRSGMFRGLDGLRTL 644
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 101/289 (34%), Positives = 141/289 (48%), Gaps = 66/289 (22%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+A + L L +N + +P KAF L+ + L KN+IS + AF+ L+ L LTLNNNN
Sbjct: 159 QALSRLDLSENFLQAVPRKAFRGATDLKNLQLDKNRISCIEEGAFRALRGLEVLTLNNNN 218
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+ ++G N
Sbjct: 219 ITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLN 278
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEP-------SCP 296
+ ++ + EF CSG GE A P SCP
Sbjct: 279 VAEVQKGEFSCSGQ-----------------------------GEAAGAPACTLSSGSCP 309
Query: 297 HPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRS 356
C C+ GIVDCR KGL +P LPE TE+
Sbjct: 310 AMCSCSSGIVDCRGKGLTAIPANLPETMTEI----------------------------- 340
Query: 357 RRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLE N I +PP AF+ Y++LRRI L N I E+ P AF + L +
Sbjct: 341 -RLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSL 388
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 190/451 (42%), Gaps = 91/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 437 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETTGARCASPR 496
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + EC ++ +CPH CRC +V+C
Sbjct: 497 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYHLNSECTSDVACPHKCRCEASVVECSSLK 556
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L+K+P +P++TTELRL N+I+ L F L++I+LS N++S++ F+G
Sbjct: 557 LSKIPERIPQSTTELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGAAS 616
Query: 171 ---------------------LKSLTSLTLNN------------------------NNLT 185
L L +L L N N++T
Sbjct: 617 VSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHIT 676
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+CHLSWL WL++ + +C P ++ +
Sbjct: 677 TISPGAFDTLQALSTLNLLANPFNCNCHLSWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQ 736
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E C P CP C C D +
Sbjct: 737 DVAFPDFRCEEGQEEV--------------------------GCLPRPQCPQECACLDTV 770
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L +P +P+ TEL +D L+ +S FK + L N I+
Sbjct: 771 VRCSNKHLQALPKGIPKNVTELY----LDGNQFTLVPGQLS-TFKYL--QLVDLSNNKIS 823
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L +F N +L + L N + +PP AF
Sbjct: 824 SLSNSSFTNMSQLTTLILSYNALQCIPPLAF 854
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 134/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N++T + G F L L TL + N F C+CHLSWL WL++ + +C P
Sbjct: 669 SLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCHLSWLGDWLRKRKIVTGNPRCQNPD 728
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ C P CP C C D +V C K L +P +P
Sbjct: 729 FLRQIPLQDVAFPDFRCEEGQEEVG--CLPRPQCPQECACLDTVVRCSNKHLQALPKGIP 786
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TEL L+ N T L P + +K L+ +DLS N+IS ++ +F + LT+L L+ N
Sbjct: 787 KNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 845
Query: 184 LTYLP------------------------DGVFAELFRLRTLRISENSFICDCHLSWLHR 219
L +P +G+FA++ L L I N CDC L WL
Sbjct: 846 LQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCRLRWLSS 905
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 906 WVKTGYKEPGIARCAGPPEMEGKLLLTTPAKKFECQG 942
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 56/111 (50%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDC GL +P +P T L L N+IT + FA K+LR + L
Sbjct: 59 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQL 118
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
+NQI V AF +K L L LN N L LP+ +F L L +SEN
Sbjct: 119 MENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSEN 169
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C VDC GL +P +P T L + I R+ K N+F
Sbjct: 59 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHK--------NDFAGL 110
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I + AF + K L R+RL +N + LP F N + L R+
Sbjct: 111 KQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRL 164
>gi|5532493|gb|AAD44758.1|AF144627_1 SLIT1 [Mus musculus]
Length = 1531
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 155/458 (33%), Positives = 230/458 (50%), Gaps = 82/458 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 187 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEP-------SCPHPCRCADGIVDCREKGLN 116
++G N+ ++ + EF CSG GE A P SCP C C+ GIVDCR KGL
Sbjct: 247 SLRGLNVAEVQKGEFSCSG-----QGEAAGAPACTLSSGSCPAMCSCSSGIVDCRGKGLT 301
Query: 117 KVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
+P LPE TE+RLE N I +PP AF+ Y++LRRIDLS NQI+++A DAFQGL+SL S
Sbjct: 302 AIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNS 361
Query: 177 LTLNNNNLTYLPDGVFA------------------------------------------- 193
L L N +T LP GVF
Sbjct: 362 LVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLA 421
Query: 194 -----ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I
Sbjct: 422 KGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETTGARCASPRRLANKRIGQIK 481
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+F+CS Y + D+H NS EC ++ +CPH CRC +V+C
Sbjct: 482 SKKFRCSAKEQ------YFIPGTEDYH-LNS--------ECTSDVACPHKCRCEASVVEC 526
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITEL 367
L+K+P +P++TTEL ++ + +L + + FK+ ++ + L N ++E+
Sbjct: 527 SSLKLSKIPERIPQSTTEL----RLNNNEISILEA--TGLFKKLSHLKKINLSNNKVSEI 580
Query: 368 PPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + + L N + + F LR +
Sbjct: 581 EDGTFEGAASVSELHLTANQLESIRSGMFRGLDGLRTL 618
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 101/289 (34%), Positives = 141/289 (48%), Gaps = 66/289 (22%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+A + L L +N + +P KAF L+ + L KN+IS + AF+ L+ L LTLNNNN
Sbjct: 133 QALSRLDLSENFLQAVPRKAFRGATDLKNLQLDKNRISCIEEGAFRALRGLEVLTLNNNN 192
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+ ++G N
Sbjct: 193 ITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLN 252
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEP-------SCP 296
+ ++ + EF CSG GE A P SCP
Sbjct: 253 VAEVQKGEFSCSGQ-----------------------------GEAAGAPACTLSSGSCP 283
Query: 297 HPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRS 356
C C+ GIVDCR KGL +P LPE TE+
Sbjct: 284 AMCSCSSGIVDCRGKGLTAIPANLPETMTEI----------------------------- 314
Query: 357 RRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLE N I +PP AF+ Y++LRRI L N I E+ P AF + L +
Sbjct: 315 -RLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSL 362
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 190/451 (42%), Gaps = 91/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 411 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETTGARCASPR 470
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + EC ++ +CPH CRC +V+C
Sbjct: 471 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYHLNSECTSDVACPHKCRCEASVVECSSLK 530
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L+K+P +P++TTELRL N+I+ L F L++I+LS N++S++ F+G
Sbjct: 531 LSKIPERIPQSTTELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGAAS 590
Query: 171 ---------------------LKSLTSLTLNN------------------------NNLT 185
L L +L L N N++T
Sbjct: 591 VSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHIT 650
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+CHLSWL WL++ + +C P ++ +
Sbjct: 651 TISPGAFDTLQALSTLNLLANPFNCNCHLSWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQ 710
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E C P CP C C D +
Sbjct: 711 DVAFPDFRCEEGQEEV--------------------------GCLPRPQCPQECACLDTV 744
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L +P +P+ TEL +D L+ +S FK + L N I+
Sbjct: 745 VRCSNKHLQALPKGIPKNVTELY----LDGNQFTLVPGQLS-TFKYL--QLVDLSNNKIS 797
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L +F N +L + L N + +PP AF
Sbjct: 798 SLSNSSFTNMSQLTTLILSYNALQCIPPLAF 828
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 134/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N++T + G F L L TL + N F C+CHLSWL WL++ + +C P
Sbjct: 643 SLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCHLSWLGDWLRKRKIVTGNPRCQNPD 702
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ C P CP C C D +V C K L +P +P
Sbjct: 703 FLRQIPLQDVAFPDFRCEEGQEEVG--CLPRPQCPQECACLDTVVRCSNKHLQALPKGIP 760
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TEL L+ N T L P + +K L+ +DLS N+IS ++ +F + LT+L L+ N
Sbjct: 761 KNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 819
Query: 184 LTYLP------------------------DGVFAELFRLRTLRISENSFICDCHLSWLHR 219
L +P +G+FA++ L L I N CDC L WL
Sbjct: 820 LQCIPPLAFQRLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCRLRWLSS 879
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 880 WVKTGYKEPGIARCAGPPEMEGKLLLTTPAKKFECQG 916
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 56/111 (50%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDC GL +P +P T L L N+IT + FA K+LR + L
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQL 92
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
+NQI V AF +K L L LN N L LP+ +F L L +SEN
Sbjct: 93 MENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSEN 143
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C VDC GL +P +P T L + I R+ K N+F
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHK--------NDFAGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I + AF + K L R+RL +N + LP F N + L R+
Sbjct: 85 KQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRL 138
>gi|149040169|gb|EDL94207.1| rCG57618, isoform CRA_a [Rattus norvegicus]
Length = 1458
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 155/458 (33%), Positives = 231/458 (50%), Gaps = 82/458 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 187 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEP-------SCPHPCRCADGIVDCREKGLN 116
++G N+ ++ + EF CSG GE A P SCP C C++GIVDCR KGL
Sbjct: 247 SLRGLNVAEVQKSEFSCSG-----QGEAAQVPACTLSSGSCPAMCSCSNGIVDCRGKGLT 301
Query: 117 KVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
+P LPE TE+RLE N I +PP AF+ Y++LRRIDLS NQI+++A DAFQGL+SL S
Sbjct: 302 AIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNS 361
Query: 177 LTLNNNNLTYLPDGVFA------------------------------------------- 193
L L N +T LP GVF
Sbjct: 362 LVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLA 421
Query: 194 -----ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I
Sbjct: 422 KGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETTGARCASPRRLANKRIGQIK 481
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+F+CS Y + D+H NS EC ++ +CPH CRC +V+C
Sbjct: 482 SKKFRCSAKEQ------YFIPGTEDYH-LNS--------ECTSDVACPHKCRCEASVVEC 526
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITEL 367
L+K+P +P++TTEL ++ + +L + + FK+ ++ + L N ++E+
Sbjct: 527 SGLKLSKIPERIPQSTTEL----RLNNNEISILEA--TGLFKKLSHLKKINLSNNKVSEI 580
Query: 368 PPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + + L N + + F LR +
Sbjct: 581 EDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTL 618
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 143/282 (50%), Gaps = 52/282 (18%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+A + L L +N + +P KAF L+ + L KNQIS + AF+ L+ L LTLNNNN
Sbjct: 133 QALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNN 192
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+ ++G N
Sbjct: 193 ITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLN 252
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
+ ++ + EF CSG + +C + + SCP C C++
Sbjct: 253 VAEVQKSEFSCSGQGEAAQVP--------------ACTL--------SSGSCPAMCSCSN 290
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQND 363
GIVDCR KGL +P LPE TE+ RLE N
Sbjct: 291 GIVDCRGKGLTAIPANLPETMTEI------------------------------RLELNG 320
Query: 364 ITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I +PP AF+ Y++LRRI L N I E+ P AF + L +
Sbjct: 321 IKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSL 362
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 189/451 (41%), Gaps = 91/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 411 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETTGARCASPR 470
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + EC ++ +CPH CRC +V+C
Sbjct: 471 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYHLNSECTSDVACPHKCRCEASVVECSGLK 530
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L+K+P +P++TTELRL N+I+ L F L++I+LS N++S++ F+G
Sbjct: 531 LSKIPERIPQSTTELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATS 590
Query: 171 ---------------------LKSLTSLTLNN------------------------NNLT 185
L L +L L N N++T
Sbjct: 591 VSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHIT 650
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+C L+WL WL++ + +C P ++ +
Sbjct: 651 TISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQ 710
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E C P CP C C D +
Sbjct: 711 DVAFPDFRCEEGQEEVG--------------------------CLPRPQCPQECACLDTV 744
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L +P +P+ TEL +D L+ +S FK + L N I+
Sbjct: 745 VRCSNKHLQALPKGIPKNVTELY----LDGNQFTLVPGQLS-TFKYL--QLVDLSNNKIS 797
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L +F N +L + L N + +PP AF
Sbjct: 798 SLSNSSFTNMSQLTTLILSYNALQCIPPLAF 828
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 134/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N++T + G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 643 SLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPD 702
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ C P CP C C D +V C K L +P +P
Sbjct: 703 FLRQIPLQDVAFPDFRCEEGQEEVG--CLPRPQCPQECACLDTVVRCSNKHLQALPKGIP 760
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TEL L+ N T L P + +K L+ +DLS N+IS ++ +F + LT+L L+ N
Sbjct: 761 KNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 819
Query: 184 LTYLP------------------------DGVFAELFRLRTLRISENSFICDCHLSWLHR 219
L +P +G+FA++ L L I N CDCHL WL
Sbjct: 820 LQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSS 879
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 880 WVKTGYKEPGIARCAGPPEMEGKLLLTTPAKKFECQG 916
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 57/113 (50%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDC GL +P +P T L L N+IT + FA K+LR + L
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQL 92
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+NQI V AF +K L L LN N L LP+ +F L L +SENS
Sbjct: 93 MENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSENSL 145
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C VDC GL +P +P T L + I R+ K N+F
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHK--------NDFAGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I + AF + K L R+RL +N + LP F N + L R+
Sbjct: 85 KQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRL 138
>gi|149040170|gb|EDL94208.1| rCG57618, isoform CRA_b [Rattus norvegicus]
Length = 1458
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 155/458 (33%), Positives = 231/458 (50%), Gaps = 82/458 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 187 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEP-------SCPHPCRCADGIVDCREKGLN 116
++G N+ ++ + EF CSG GE A P SCP C C++GIVDCR KGL
Sbjct: 247 SLRGLNVAEVQKSEFSCSG-----QGEAAQVPACTLSSGSCPAMCSCSNGIVDCRGKGLT 301
Query: 117 KVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
+P LPE TE+RLE N I +PP AF+ Y++LRRIDLS NQI+++A DAFQGL+SL S
Sbjct: 302 AIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNS 361
Query: 177 LTLNNNNLTYLPDGVFA------------------------------------------- 193
L L N +T LP GVF
Sbjct: 362 LVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLA 421
Query: 194 -----ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I
Sbjct: 422 KGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETTGARCASPRRLANKRIGQIK 481
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+F+CS Y + D+H NS EC ++ +CPH CRC +V+C
Sbjct: 482 SKKFRCSAKEQ------YFIPGTEDYH-LNS--------ECTSDVACPHKCRCEASVVEC 526
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITEL 367
L+K+P +P++TTEL ++ + +L + + FK+ ++ + L N ++E+
Sbjct: 527 SGLKLSKIPERIPQSTTEL----RLNNNEISILEA--TGLFKKLSHLKKINLSNNKVSEI 580
Query: 368 PPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + + L N + + F LR +
Sbjct: 581 EDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTL 618
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 143/282 (50%), Gaps = 52/282 (18%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+A + L L +N + +P KAF L+ + L KNQIS + AF+ L+ L LTLNNNN
Sbjct: 133 QALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNN 192
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+ ++G N
Sbjct: 193 ITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLN 252
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
+ ++ + EF CSG + +C + + SCP C C++
Sbjct: 253 VAEVQKSEFSCSGQGEAAQVP--------------ACTL--------SSGSCPAMCSCSN 290
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQND 363
GIVDCR KGL +P LPE TE+ RLE N
Sbjct: 291 GIVDCRGKGLTAIPANLPETMTEI------------------------------RLELNG 320
Query: 364 ITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I +PP AF+ Y++LRRI L N I E+ P AF + L +
Sbjct: 321 IKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSL 362
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 189/451 (41%), Gaps = 91/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 411 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETTGARCASPR 470
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + EC ++ +CPH CRC +V+C
Sbjct: 471 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYHLNSECTSDVACPHKCRCEASVVECSGLK 530
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L+K+P +P++TTELRL N+I+ L F L++I+LS N++S++ F+G
Sbjct: 531 LSKIPERIPQSTTELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATS 590
Query: 171 ---------------------LKSLTSLTLNN------------------------NNLT 185
L L +L L N N++T
Sbjct: 591 VSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHIT 650
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+C L+WL WL++ + +C P ++ +
Sbjct: 651 TISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQ 710
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E C P CP C C D +
Sbjct: 711 DVAFPDFRCEEGQEEV--------------------------GCLPRPQCPQECACLDTV 744
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L +P +P+ TEL +D L+ +S FK + L N I+
Sbjct: 745 VRCSNKHLQALPKGIPKNVTELY----LDGNQFTLVPGQLS-TFKYL--QLVDLSNNKIS 797
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L +F N +L + L N + +PP AF
Sbjct: 798 SLSNSSFTNMSQLTTLILSYNALQCIPPLAF 828
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 134/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N++T + G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 643 SLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPD 702
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ C P CP C C D +V C K L +P +P
Sbjct: 703 FLRQIPLQDVAFPDFRCEEGQEEVG--CLPRPQCPQECACLDTVVRCSNKHLQALPKGIP 760
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TEL L+ N T L P + +K L+ +DLS N+IS ++ +F + LT+L L+ N
Sbjct: 761 KNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 819
Query: 184 LTYLP------------------------DGVFAELFRLRTLRISENSFICDCHLSWLHR 219
L +P +G+FA++ L L I N CDCHL WL
Sbjct: 820 LQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSS 879
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 880 WVKTGYKEPGIARCAGPPEMEGKLLLTTPAKKFECQG 916
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 57/113 (50%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDC GL +P +P T L L N+IT + FA K+LR + L
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQL 92
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+NQI V AF +K L L LN N L LP+ +F L L +SENS
Sbjct: 93 MENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSENSL 145
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C VDC GL +P +P T L + I R+ K N+F
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHK--------NDFAGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I + AF + K L R+RL +N + LP F N + L R+
Sbjct: 85 KQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRL 138
>gi|449505770|ref|XP_004174906.1| PREDICTED: LOW QUALITY PROTEIN: slit homolog 1 protein [Taeniopygia
guttata]
Length = 1428
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 157/456 (34%), Positives = 230/456 (50%), Gaps = 78/456 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C AP+
Sbjct: 150 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCAAPA 209
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGE-CA-AEPSCPHPCRCADGIVDCREKGLNKVPIL 121
++G N+ +I ++EF CSG + + C+ + SCP C C++GIVDCR KGL +P
Sbjct: 210 QLRGLNVAEIQKNEFSCSGQTDSAHAQLCSLSSGSCPAMCTCSNGIVDCRGKGLTAIPAN 269
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
LPE TE+RLE N I +PP AF+ YK+LRRIDLS NQIS++A DAFQGL+SL SL L
Sbjct: 270 LPETMTEIRLELNGIKSIPPGAFSPYKKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYG 329
Query: 182 NNLTYLPDGVF--------------------AELFR------------------------ 197
N +T LP GVF A+ F+
Sbjct: 330 NKITDLPKGVFGGLFSLQLLLLNANKINCVRADAFQDLQNLSLLSLYDNKIQSLAKGTFT 389
Query: 198 ----LRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFK 253
++TL +++N FICDC+L WL +L+ P +C +P + + I I +F+
Sbjct: 390 SLRAIQTLHLAQNPFICDCNLKWLADFLRANPVETSGARCASPRRLANKRIGQIKSKKFR 449
Query: 254 CSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL 313
CS Y + D+ NS EC ++ CP CRC G+V+C L
Sbjct: 450 CSAKEQ------YFIPGTEDYQ-LNS--------ECNSDVICPPKCRCESGVVECSNLKL 494
Query: 314 NKVPILLPEATTEL---TYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPP 369
K+P +P++T EL +SI + FK+ + + L N ++E+
Sbjct: 495 TKIPDRIPQSTAELRLNNNEISILEATGI---------FKKLPHLKKINLSNNKVSEIED 545
Query: 370 KAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
AF + + L N + + F LR +
Sbjct: 546 GAFEGASSVNELHLTVNQLESVRSGMFRGLDGLRTL 581
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 154/294 (52%), Gaps = 55/294 (18%)
Query: 115 LNKVPILL---PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L+ +P LL +A + L L +N I +P KAF L+ + L KNQIS + AF+ L
Sbjct: 84 LHTLPELLFQNNQALSRLDLSENFIQAIPRKAFRGATDLKNLQLDKNQISCIEDGAFRAL 143
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T
Sbjct: 144 RGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFT 203
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C AP+ ++G N+ +I ++EF CSG + +++ CS +
Sbjct: 204 QCAAPAQLRGLNVAEIQKNEFSCSGQTDSAHAQL----CSL------------------S 241
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++GIVDCR KGL +P LPE TE+
Sbjct: 242 SGSCPAMCTCSNGIVDCRGKGLTAIPANLPETMTEI------------------------ 277
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLE N I +PP AF+ YK+LRRI L N I+E+ P AF + L +
Sbjct: 278 ------RLELNGIKSIPPGAFSPYKKLRRIDLSNNQISEIAPDAFQGLRSLNSL 325
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 128/477 (26%), Positives = 197/477 (41%), Gaps = 101/477 (21%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 374 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRANPVETSGARCASPR 433
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + EC ++ CP CRC G+V+C
Sbjct: 434 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVICPPKCRCESGVVECSNLK 493
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L K+P +P++T ELRL N+I+ L F L++I+LS N++S++ AF+G
Sbjct: 494 LTKIPDRIPQSTAELRLNNNEISILEATGIFKKLPHLKKINLSNNKVSEIEDGAFEGASS 553
Query: 171 ---------------------LKSLTSLTLNN------------------------NNLT 185
L L +L L N N ++
Sbjct: 554 VNELHLTVNQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIS 613
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+C L+WL WL++ + +C P ++ +
Sbjct: 614 TIAPGAFDTLQSLSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQ 673
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C ET C P CP C C D +
Sbjct: 674 DVAFPDFRCEEGKEET--------------------------TCIPRPQCPQECTCLDTV 707
Query: 306 VDCREKGLNKVPILLPEATTEL-------TYMVSIDRVDKVLLYSYISNN------FKRW 352
V C K L +P +P+ TEL T + K L +SNN +
Sbjct: 708 VRCSNKHLKALPKGIPKNVTELYLDGNQFTQVPGQLSTFKYLQLVDLSNNKISSLSNSSF 767
Query: 353 TNRSRR----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
TN S+ L N + +PP AF + LR + L NDI+ LP FA+ L +
Sbjct: 768 TNMSQLTTLILSYNSLQCIPPLAFEGLRSLRLLSLHGNDISSLPEGIFADVTSLSHL 824
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 137/277 (49%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N ++ + G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 606 SLYDNQISTIAPGAFDTLQSLSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPD 665
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ T C P CP C C D +V C K L +P +P
Sbjct: 666 FLRQIPLQDVAFPDFRCEEGKEETT--CIPRPQCPQECTCLDTVVRCSNKHLKALPKGIP 723
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN--- 180
+ TEL L+ N T++P + + +K L+ +DLS N+IS ++ +F + LT+L L+
Sbjct: 724 KNVTELYLDGNQFTQVPGQ-LSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNS 782
Query: 181 ---------------------NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
N+++ LP+G+FA++ L L I N C C+L WL
Sbjct: 783 LQCIPPLAFEGLRSLRLLSLHGNDISSLPEGIFADVTSLSHLAIGANPLYCSCNLRWLSS 842
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 843 WVKTGYKEPGIARCAGPPDMEGKLLLTTPAKKFECQG 879
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 46/88 (52%)
Query: 119 PILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLT 178
PI ++ + L N+IT + FA K+LR + L +NQIS V AF +K L L
Sbjct: 19 PISDDGSSGIIELNGNNITRINKNDFAGLKQLRVLQLMENQISVVERGAFDDMKELERLR 78
Query: 179 LNNNNLTYLPDGVFAELFRLRTLRISEN 206
LN N L LP+ +F L L +SEN
Sbjct: 79 LNRNQLHTLPELLFQNNQALSRLDLSEN 106
>gi|12621130|ref|NP_075242.1| slit homolog 1 protein precursor [Rattus norvegicus]
gi|45477219|sp|O88279.1|SLIT1_RAT RecName: Full=Slit homolog 1 protein; Short=Slit-1; AltName:
Full=Multiple epidermal growth factor-like domains
protein 4; Short=Multiple EGF-like domains protein 4;
Flags: Precursor
gi|3449290|dbj|BAA32460.1| MEGF4 [Rattus norvegicus]
gi|149040171|gb|EDL94209.1| rCG57618, isoform CRA_c [Rattus norvegicus]
Length = 1531
Score = 261 bits (666), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 155/458 (33%), Positives = 231/458 (50%), Gaps = 82/458 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 187 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEP-------SCPHPCRCADGIVDCREKGLN 116
++G N+ ++ + EF CSG GE A P SCP C C++GIVDCR KGL
Sbjct: 247 SLRGLNVAEVQKSEFSCSG-----QGEAAQVPACTLSSGSCPAMCSCSNGIVDCRGKGLT 301
Query: 117 KVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
+P LPE TE+RLE N I +PP AF+ Y++LRRIDLS NQI+++A DAFQGL+SL S
Sbjct: 302 AIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNS 361
Query: 177 LTLNNNNLTYLPDGVFA------------------------------------------- 193
L L N +T LP GVF
Sbjct: 362 LVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLA 421
Query: 194 -----ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I
Sbjct: 422 KGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETTGARCASPRRLANKRIGQIK 481
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+F+CS Y + D+H NS EC ++ +CPH CRC +V+C
Sbjct: 482 SKKFRCSAKEQ------YFIPGTEDYH-LNS--------ECTSDVACPHKCRCEASVVEC 526
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITEL 367
L+K+P +P++TTEL ++ + +L + + FK+ ++ + L N ++E+
Sbjct: 527 SGLKLSKIPERIPQSTTEL----RLNNNEISILEA--TGLFKKLSHLKKINLSNNKVSEI 580
Query: 368 PPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + + L N + + F LR +
Sbjct: 581 EDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTL 618
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 143/282 (50%), Gaps = 52/282 (18%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+A + L L +N + +P KAF L+ + L KNQIS + AF+ L+ L LTLNNNN
Sbjct: 133 QALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNN 192
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+ ++G N
Sbjct: 193 ITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLN 252
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
+ ++ + EF CSG + +C + + SCP C C++
Sbjct: 253 VAEVQKSEFSCSGQGEAAQVP--------------ACTL--------SSGSCPAMCSCSN 290
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQND 363
GIVDCR KGL +P LPE TE+ RLE N
Sbjct: 291 GIVDCRGKGLTAIPANLPETMTEI------------------------------RLELNG 320
Query: 364 ITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I +PP AF+ Y++LRRI L N I E+ P AF + L +
Sbjct: 321 IKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSL 362
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 189/451 (41%), Gaps = 91/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 411 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETTGARCASPR 470
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + EC ++ +CPH CRC +V+C
Sbjct: 471 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYHLNSECTSDVACPHKCRCEASVVECSGLK 530
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L+K+P +P++TTELRL N+I+ L F L++I+LS N++S++ F+G
Sbjct: 531 LSKIPERIPQSTTELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATS 590
Query: 171 ---------------------LKSLTSLTLNN------------------------NNLT 185
L L +L L N N++T
Sbjct: 591 VSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHIT 650
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+C L+WL WL++ + +C P ++ +
Sbjct: 651 TISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQ 710
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E C P CP C C D +
Sbjct: 711 DVAFPDFRCEEGQEEV--------------------------GCLPRPQCPQECACLDTV 744
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L +P +P+ TEL +D L+ +S FK + L N I+
Sbjct: 745 VRCSNKHLQALPKGIPKNVTELY----LDGNQFTLVPGQLS-TFKYL--QLVDLSNNKIS 797
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L +F N +L + L N + +PP AF
Sbjct: 798 SLSNSSFTNMSQLTTLILSYNALQCIPPLAF 828
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 134/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N++T + G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 643 SLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPD 702
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ C P CP C C D +V C K L +P +P
Sbjct: 703 FLRQIPLQDVAFPDFRCEEGQEEVG--CLPRPQCPQECACLDTVVRCSNKHLQALPKGIP 760
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TEL L+ N T L P + +K L+ +DLS N+IS ++ +F + LT+L L+ N
Sbjct: 761 KNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 819
Query: 184 LTYLP------------------------DGVFAELFRLRTLRISENSFICDCHLSWLHR 219
L +P +G+FA++ L L I N CDCHL WL
Sbjct: 820 LQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSS 879
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 880 WVKTGYKEPGIARCAGPPEMEGKLLLTTPAKKFECQG 916
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 57/113 (50%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDC GL +P +P T L L N+IT + FA K+LR + L
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQL 92
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+NQI V AF +K L L LN N L LP+ +F L L +SENS
Sbjct: 93 MENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSENSL 145
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C VDC GL +P +P T L + I R+ K N+F
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHK--------NDFAGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I + AF + K L R+RL +N + LP F N + L R+
Sbjct: 85 KQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRL 138
>gi|329755343|ref|NP_001178379.1| slit homolog 3 protein precursor [Bos taurus]
Length = 1475
Score = 260 bits (665), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 158/451 (35%), Positives = 222/451 (49%), Gaps = 76/451 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 139 TLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGPFTLCMAPV 198
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ D+ + E+ CSGP +P A SCP C C++ IVDCR KGL ++P LP
Sbjct: 199 HLRGFNVADVQKKEYVCSGPHSEPPACNANSISCPSACTCSNNIVDCRGKGLTEIPANLP 258
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N
Sbjct: 259 EGIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 318
Query: 184 LTYLP------------------------------------------------DGVFAEL 195
+T +P G+FA L
Sbjct: 319 ITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQSLSLLSLYDNKLQTISKGLFAPL 378
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N F+CDCHL WL +L+ P +C +P + + I I +F+CS
Sbjct: 379 QAIQTLHLAQNPFVCDCHLRWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCS 438
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
GS + RS+ + EC + CP CRC IVDC + L +
Sbjct: 439 GSE-DYRSRF--------------------SSECFMDLVCPDRCRCEGTIVDCSNQKLAR 477
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P LPE T+L D VL + I FK+ N R L N I E+ AF
Sbjct: 478 IPSHLPEYVTDLRLN---DNEISVLEATGI---FKKLPNLRKINLSNNRIKEVKEGAFDG 531
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ + L N + +AF L+ +
Sbjct: 532 AASVQELVLTGNQLETAHGRAFRGLSGLKTL 562
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 155/334 (46%), Gaps = 78/334 (23%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC GL VP +P LRL +N + LP F + +L R+DL
Sbjct: 33 ACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLRLNKNKLQVLPELLFQSNLKLTRLDL 92
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELF------------------- 196
S+NQI + AF+G+ + +L L+NN+++ + DG F L
Sbjct: 93 SENQILGIPRKAFRGIADVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTS 152
Query: 197 -----RLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
++RTLR+ N CDCHL+WL WL++ +G +T C AP H++G N+ D+ + E
Sbjct: 153 FNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGPFTLCMAPVHLRGFNVADVQKKE 212
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
+ CSG P +P A SCP C C++ IVDCR K
Sbjct: 213 YVCSG------------------------PHSEPPACNANSISCPSACTCSNNIVDCRGK 248
Query: 312 GLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKA 371
GL ++P LPE E+ RLEQN I +P A
Sbjct: 249 GLTEIPANLPEGIVEI------------------------------RLEQNSIKSIPAGA 278
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F YK+L+RI + +N I+++ P AF K L +
Sbjct: 279 FTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 312
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/470 (26%), Positives = 199/470 (42%), Gaps = 100/470 (21%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
+N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P +
Sbjct: 364 DNKLQTISKGLFAPLQAIQTLHLAQNPFVCDCHLRWLADYLQDNPIETSGARCSSPRRLA 423
Query: 67 GQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+ I I +F+CSG + + + EC + CP CRC IVDC + L ++P LP
Sbjct: 424 NKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPDRCRCEGTIVDCSNQKLARIPSHLP 483
Query: 124 EATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVD------------- 166
E T+LRL N+I+ L F LR+I+LS N+I +V A D
Sbjct: 484 EYVTDLRLNDNEISVLEATGIFKKLPNLRKINLSNNRIKEVKEGAFDGAASVQELVLTGN 543
Query: 167 --------AFQGLKSLTS------------------------LTLNNNNLTYLPDGVFAE 194
AF+GL L + L+L +N +T + G F
Sbjct: 544 QLETAHGRAFRGLSGLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTT 603
Query: 195 LFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
L L T+ + N F C+CHL+WL +WL++ + +C P +K I D+ +F C
Sbjct: 604 LVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTC 663
Query: 255 SGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLN 314
G+ + C P CP C C + +V C +GL
Sbjct: 664 DGNDESS---------------------------CQLGPRCPEQCTCVETVVRCSNRGLR 696
Query: 315 KVPILLPEATTEL-------------------TYMVSIDRVDKVLLYSYISNNFKRWTNR 355
+P +P+ TEL ++ + +L +Y +N +
Sbjct: 697 ALPKGIPKDVTELYLEGNHLTAVPKELSSFRHLTLIDLSNNSIGMLTNYTFSNMSHLS-- 754
Query: 356 SRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L N + +P +F + LR + L NDI+ +P +F + L +
Sbjct: 755 TLILSYNRLRCIPVHSFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHL 804
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 152/326 (46%), Gaps = 39/326 (11%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CHL+WL +WL++ + +C P
Sbjct: 587 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPF 646
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C + +V C +GL +P +P
Sbjct: 647 FLKEIPIQDVAIQDFTCDGNDES---SCQLGPRCPEQCTCVETVVRCSNRGLRALPKGIP 703
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISK--------------------- 162
+ TEL LE N +T +P K ++++ L IDLS N I
Sbjct: 704 KDVTELYLEGNHLTAVP-KELSSFRHLTLIDLSNNSIGMLTNYTFSNMSHLSTLILSYNR 762
Query: 163 ---VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
+ V +F GL+SL LTL+ N+++ +P+G F +L L L + N CDC L WL
Sbjct: 763 LRCIPVHSFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSE 822
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG-SSMETRSKIYREECSTDFHPYN 278
W+K + +C +P + + +L P H F+C G + +K P
Sbjct: 823 WVKAGYKEPGIARCSSPEPMADRLLLTTPTHRFQCKGPVDIGIVAKC---------DPCL 873
Query: 279 SCPVEKPTGECAAEPSCPHPCRCADG 304
S P K G C+ +P H C C+ G
Sbjct: 874 SSPC-KNNGTCSQDPVEGHRCACSHG 898
>gi|395817090|ref|XP_003782008.1| PREDICTED: slit homolog 3 protein [Otolemur garnettii]
Length = 1523
Score = 260 bits (664), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 156/451 (34%), Positives = 221/451 (49%), Gaps = 76/451 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 187 TLNNNNISRILVTSFNHMPKIRTLRLHSNHLHCDCHLAWLSDWLRQRRTVGQFTLCMAPV 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ D+ + E+ CSGP P A SCP PC C++ IVDCR KGL ++P LP
Sbjct: 247 HLRGFNVADVQKKEYVCSGPHSDPPSCNANSISCPSPCTCSNNIVDCRGKGLTEIPANLP 306
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N
Sbjct: 307 EGIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 366
Query: 184 LT------------------------------------------------YLPDGVFAEL 195
+T + G+FA L
Sbjct: 367 ITEIAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQDLTLLSLYDNKLQTIAKGLFAPL 426
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N F+CDCHL WL +L+ P +C +P + + I I +F+CS
Sbjct: 427 QSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCS 486
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
GS + RS+ + EC + CP CRC IVDC + L +
Sbjct: 487 GSE-DYRSRF--------------------SSECFMDLMCPEKCRCEGTIVDCSNQKLAR 525
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P LPE T+L D +L + I FK+ N R L N I E+ AF
Sbjct: 526 IPSHLPEYVTDLRLN---DNEISILEATGI---FKKLPNLRKINLSNNKIKEVREGAFDG 579
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ + L N + + + F L+ +
Sbjct: 580 AASVQELMLTGNQLETMHGRMFRGLGGLKTL 610
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 130/471 (27%), Positives = 202/471 (42%), Gaps = 96/471 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 409 SLYDNKLQTIAKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 468
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + + + EC + CP CRC IVDC + L ++P
Sbjct: 469 RLANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLMCPEKCRCEGTIVDCSNQKLARIPS 528
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVDA--------- 167
LPE T+LRL N+I+ L F LR+I+LS N+I +V A D
Sbjct: 529 HLPEYVTDLRLNDNEISILEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELML 588
Query: 168 ------------FQGLKSLTS------------------------LTLNNNNLTYLPDGV 191
F+GL L + L+L +N +T + G
Sbjct: 589 TGNQLETMHGRMFRGLGGLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGA 648
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L T+ + N F C+CHL+WL +WL++ + +C P +K I D+ +
Sbjct: 649 FTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 708
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ + C P CP C C D +V C K
Sbjct: 709 FTCEGNDESS---------------------------CQLSPRCPDQCTCVDTVVRCSNK 741
Query: 312 GLNKVPILLPEATTEL----TYMVSIDRVDKVL----LYSYISNNFKRWTNRSRR----- 358
GL +P +P+ TEL ++ ++ R L L +N+ TN +
Sbjct: 742 GLRALPKGMPKDVTELYLEGNHLTAVPRELSALRHLTLIDLSNNSISVLTNYTFSNMSHL 801
Query: 359 ----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P AF + LR + L NDI+ +P +F + L +
Sbjct: 802 STLILSYNRLRCIPIHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHL 852
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/279 (34%), Positives = 135/279 (48%), Gaps = 54/279 (19%)
Query: 127 TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTY 186
T L L +N I +P KAF ++ + L N IS + AF+ L+ L LTLNNNN++
Sbjct: 136 TRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRGLEILTLNNNNISR 195
Query: 187 LPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILD 246
+ F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP H++G N+ D
Sbjct: 196 ILVTSFNHMPKIRTLRLHSNHLHCDCHLAWLSDWLRQRRTVGQFTLCMAPVHLRGFNVAD 255
Query: 247 IPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIV 306
+ + E+ CSG P P A SCP PC C++ IV
Sbjct: 256 VQKKEYVCSG------------------------PHSDPPSCNANSISCPSPCTCSNNIV 291
Query: 307 DCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITE 366
DCR KGL ++P LPE E+ RLEQN I
Sbjct: 292 DCRGKGLTEIPANLPEGIVEI------------------------------RLEQNSIKS 321
Query: 367 LPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+P AF YK+L+RI + +N I+++ P AF K L +
Sbjct: 322 IPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 360
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 134/276 (48%), Gaps = 26/276 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CHL+WL +WL++ + +C P
Sbjct: 635 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPF 694
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C D +V C KGL +P +P
Sbjct: 695 FLKEIPIQDVAIQDFTCEGNDES---SCQLSPRCPDQCTCVDTVVRCSNKGLRALPKGMP 751
Query: 124 EATTELRLEQNDITELPPK-----------------------AFANYKRLRRIDLSKNQI 160
+ TEL LE N +T +P + F+N L + LS N++
Sbjct: 752 KDVTELYLEGNHLTAVPRELSALRHLTLIDLSNNSISVLTNYTFSNMSHLSTLILSYNRL 811
Query: 161 SKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW 220
+ + AF GL+SL LTL+ N+++ +P+G F +L L L + N CDC L WL W
Sbjct: 812 RCIPIHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEW 871
Query: 221 LKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
+K + +C +P + + +L P H F+C G
Sbjct: 872 VKAGYKEPGIARCSSPEPMADRLLLTTPTHRFQCKG 907
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TL+ N+++ +P+G F +L L L + N CDC L WL W+K + +C +P
Sbjct: 829 TLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSSPE 888
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ + +L P H F+C GPV+
Sbjct: 889 PMADRLLLTTPTHRFQCKGPVD 910
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTY-MVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ VDC GL VP +P L +I R+ K+ +F
Sbjct: 33 ACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRISKM--------DFAGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R LE N ++ + AF + K+L R+RL +N + LP F + +L R+
Sbjct: 85 KNLRVLHLEDNQVSIIERGAFQDLKQLERLRLNKNKLQVLPEMLFQSNPKLTRL 138
>gi|296475945|tpg|DAA18060.1| TPA: slit homolog 3 [Bos taurus]
Length = 1562
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 158/451 (35%), Positives = 222/451 (49%), Gaps = 76/451 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 187 TLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGPFTLCMAPV 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ D+ + E+ CSGP +P A SCP C C++ IVDCR KGL ++P LP
Sbjct: 247 HLRGFNVADVQKKEYVCSGPHSEPPACNANSISCPSACTCSNNIVDCRGKGLTEIPANLP 306
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N
Sbjct: 307 EGIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 366
Query: 184 LTYLP------------------------------------------------DGVFAEL 195
+T +P G+FA L
Sbjct: 367 ITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQSLSLLSLYDNKLQTISKGLFAPL 426
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N F+CDCHL WL +L+ P +C +P + + I I +F+CS
Sbjct: 427 QAIQTLHLAQNPFVCDCHLRWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCS 486
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
GS + RS+ + EC + CP CRC IVDC + L +
Sbjct: 487 GSE-DYRSRF--------------------SSECFMDLVCPDRCRCEGTIVDCSNQKLAR 525
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P LPE T+L D VL + I FK+ N R L N I E+ AF
Sbjct: 526 IPSHLPEYVTDLRLN---DNEISVLEATGI---FKKLPNLRKINLSNNRIKEVKEGAFDG 579
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ + L N + +AF L+ +
Sbjct: 580 AASVQELVLTGNQLETAHGRAFRGLSGLKTL 610
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/470 (26%), Positives = 199/470 (42%), Gaps = 100/470 (21%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
+N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P +
Sbjct: 412 DNKLQTISKGLFAPLQAIQTLHLAQNPFVCDCHLRWLADYLQDNPIETSGARCSSPRRLA 471
Query: 67 GQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+ I I +F+CSG + + + EC + CP CRC IVDC + L ++P LP
Sbjct: 472 NKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPDRCRCEGTIVDCSNQKLARIPSHLP 531
Query: 124 EATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVD------------- 166
E T+LRL N+I+ L F LR+I+LS N+I +V A D
Sbjct: 532 EYVTDLRLNDNEISVLEATGIFKKLPNLRKINLSNNRIKEVKEGAFDGAASVQELVLTGN 591
Query: 167 --------AFQGLKSLTS------------------------LTLNNNNLTYLPDGVFAE 194
AF+GL L + L+L +N +T + G F
Sbjct: 592 QLETAHGRAFRGLSGLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTT 651
Query: 195 LFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
L L T+ + N F C+CHL+WL +WL++ + +C P +K I D+ +F C
Sbjct: 652 LVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTC 711
Query: 255 SGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLN 314
G+ + C P CP C C + +V C +GL
Sbjct: 712 DGNDESS---------------------------CQLGPRCPEQCTCVETVVRCSNRGLR 744
Query: 315 KVPILLPEATTEL-------------------TYMVSIDRVDKVLLYSYISNNFKRWTNR 355
+P +P+ TEL ++ + +L +Y +N +
Sbjct: 745 ALPKGIPKDVTELYLEGNHLTAVPKELSSFRHLTLIDLSNNSIGMLTNYTFSNMSHLS-- 802
Query: 356 SRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L N + +P +F + LR + L NDI+ +P +F + L +
Sbjct: 803 TLILSYNRLRCIPVHSFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHL 852
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 142/294 (48%), Gaps = 57/294 (19%)
Query: 115 LNKVPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL ++ T L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 121 LQVLPELLFQSNLKLTRLDLSENQILGIPRKAFRGIADVKNLQLDNNHISCIEDGAFRAL 180
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T
Sbjct: 181 RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGPFT 240
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
C AP H++G N+ D+ + E+ CSG P +P A
Sbjct: 241 LCMAPVHLRGFNVADVQKKEYVCSG------------------------PHSEPPACNAN 276
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++ IVDCR KGL ++P LPE E+
Sbjct: 277 SISCPSACTCSNNIVDCRGKGLTEIPANLPEGIVEI------------------------ 312
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF YK+L+RI + +N I+++ P AF K L +
Sbjct: 313 ------RLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 360
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 109/222 (49%), Gaps = 28/222 (12%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CHL+WL +WL++ + +C P
Sbjct: 635 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPF 694
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C + +V C +GL +P +P
Sbjct: 695 FLKEIPIQDVAIQDFTCDGNDES---SCQLGPRCPEQCTCVETVVRCSNRGLRALPKGIP 751
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISK--------------------- 162
+ TEL LE N +T + PK ++++ L IDLS N I
Sbjct: 752 KDVTELYLEGNHLTAV-PKELSSFRHLTLIDLSNNSIGMLTNYTFSNMSHLSTLILSYNR 810
Query: 163 ---VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTL 201
+ V +F GL+SL LTL+ N+++ +P+G F +L L L
Sbjct: 811 LRCIPVHSFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHL 852
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ VDC GL VP +P L +D+ + +F
Sbjct: 33 ACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLD-------LDRNNITRITKTDFAGLK 85
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R LE N ++ + AF + K+L R+RL +N + LP F + +L R+
Sbjct: 86 NLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSNLKLTRL 138
>gi|395828355|ref|XP_003787349.1| PREDICTED: slit homolog 1 protein [Otolemur garnettii]
Length = 1534
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 155/454 (34%), Positives = 229/454 (50%), Gaps = 74/454 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 187 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEK---PTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
++G N+ ++ + EF CSG E PT + SCP C C++GIVDCR KGL +P
Sbjct: 247 SLRGLNVAEVQKSEFSCSGQGEAGRMPTCT-LSSGSCPAMCTCSNGIVDCRGKGLTAIPA 305
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN 180
LPE TE+RLE N I +PP AF+ Y++LRRIDLS NQI+++A DAFQGL+SL SL L
Sbjct: 306 NLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 365
Query: 181 NNNLTYLPDGVFA----------------------------------------------- 193
N +T LP GVF
Sbjct: 366 GNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTF 425
Query: 194 -ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I +F
Sbjct: 426 TSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANKRIGQIKSKKF 485
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CS Y + D+H NS EC ++ CPH CRC +V+C
Sbjct: 486 RCSAKEQ------YFIPGTEDYH-LNS--------ECNSDVVCPHKCRCEASVVECSSLK 530
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPPKA 371
L K+P +P++T EL ++ + +L + + FK+ T+ + L N ++E+ A
Sbjct: 531 LTKIPERIPQSTAEL----RLNNNEISILEA--TGMFKKLTHLKKINLSNNKLSEIEDGA 584
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + + L N + + F LR +
Sbjct: 585 FEGAASVSELHLTANQLESIRSGMFRGLDGLRTL 618
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/282 (35%), Positives = 143/282 (50%), Gaps = 52/282 (18%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+A + L L +N I +P KAF L+ + L KNQIS + AF+ L+ L LTLNNNN
Sbjct: 133 QALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNN 192
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+ ++G N
Sbjct: 193 ITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLN 252
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
+ ++ + EF CSG R +C + + SCP C C++
Sbjct: 253 VAEVQKSEFSCSGQGEAGRMP--------------TCTL--------SSGSCPAMCTCSN 290
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQND 363
GIVDCR KGL +P LPE TE+ RLE N
Sbjct: 291 GIVDCRGKGLTAIPANLPETMTEI------------------------------RLELNG 320
Query: 364 ITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I +PP AF+ Y++LRRI L N I E+ P AF + L +
Sbjct: 321 IKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSL 362
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 186/451 (41%), Gaps = 91/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 411 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPR 470
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + EC ++ CPH CRC +V+C
Sbjct: 471 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYHLNSECNSDVVCPHKCRCEASVVECSSLK 530
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L K+P +P++T ELRL N+I+ L F L++I+LS N++S++ AF+G
Sbjct: 531 LTKIPERIPQSTAELRLNNNEISILEATGMFKKLTHLKKINLSNNKLSEIEDGAFEGAAS 590
Query: 171 ---------------------LKSLTSLTLNN------------------------NNLT 185
L L +L L N N +T
Sbjct: 591 VSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCVHNESFTGLRNVRLLSLYDNQIT 650
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+C L+WL WL++ + +C P ++ +
Sbjct: 651 TVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQ 710
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E C P CP C C D +
Sbjct: 711 DVAFPDFRCEEGQEEV--------------------------GCLPRPQCPQECSCLDTV 744
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L +P +P+ TEL +D L+ +S FK + L N I+
Sbjct: 745 VRCSNKHLQALPKGIPKNVTELY----LDGNQFTLVPGQLS-TFKYL--QLVDLSNNKIS 797
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L +F N +L + L N + +PP AF
Sbjct: 798 SLSNSSFTNMSQLTTLILSYNALRCIPPLAF 828
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 643 SLYDNQITTVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPD 702
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ C P CP C C D +V C K L +P +P
Sbjct: 703 FLRQIPLQDVAFPDFRCEEGQEEVG--CLPRPQCPQECSCLDTVVRCSNKHLQALPKGIP 760
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN--- 180
+ TEL L+ N T L P + +K L+ +DLS N+IS ++ +F + LT+L L+
Sbjct: 761 KNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 819
Query: 181 ---------------------NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
N+++ L +G+FA++ L L I N CDC L WL
Sbjct: 820 LRCIPPLAFQGLRSLRLLSLHGNDISTLREGIFADVTSLSHLAIGANPLYCDCSLRWLSG 879
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 880 WVKTGYKEPGIARCAGPPDMEGKLLLTTPAKKFECQG 916
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 56/113 (49%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
CP C C VDC GL +P +P T L L N+I+ + FA K+LR + L
Sbjct: 33 GCPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNISRIHKNDFAGLKQLRVLQL 92
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+NQI V AF +K L L LN N L LP+ +F L L +SEN+
Sbjct: 93 MENQIGAVERGAFDDMKELERLRLNRNQLHVLPELLFQNNQALSRLDLSENAI 145
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 50/114 (43%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
CP C C VDC GL +P +P T L + I R+ K N+F
Sbjct: 33 GCPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNISRIHK--------NDFAGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I + AF + K L R+RL +N + LP F N + L R+
Sbjct: 85 KQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHVLPELLFQNNQALSRL 138
>gi|403290207|ref|XP_003936220.1| PREDICTED: slit homolog 3 protein [Saimiri boliviensis boliviensis]
Length = 1523
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 157/451 (34%), Positives = 221/451 (49%), Gaps = 76/451 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 187 TLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFTLCMAPV 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ D+ + E+ C GP +P A SCP PC C++ IVDCR KGL ++P LP
Sbjct: 247 HLRGFNVADVQKKEYVCPGPHSEPPSCNANSISCPSPCTCSNNIVDCRGKGLTEIPANLP 306
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N
Sbjct: 307 EGIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 366
Query: 184 LT------------------------------------------------YLPDGVFAEL 195
+T + G+FA L
Sbjct: 367 ITEIAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPL 426
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N F+CDCHL WL +L+ P +C +P + + I I +F+CS
Sbjct: 427 QSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCS 486
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
GS + RS+ + EC + CP CRC IVDC + L +
Sbjct: 487 GSE-DYRSRF--------------------SSECFMDLVCPEKCRCEGTIVDCSNQKLAR 525
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
VP LPE T+L D VL + I FK+ N R L N I E+ AF
Sbjct: 526 VPSHLPEYVTDLRLN---DNEISVLEATGI---FKKLPNLRKINLSNNKIKEVREGAFDG 579
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ + L N + + + F L+ +
Sbjct: 580 AASVQELMLTGNQLETVHGRMFRGLSGLKTL 610
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 130/471 (27%), Positives = 202/471 (42%), Gaps = 96/471 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 409 SLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 468
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + + + EC + CP CRC IVDC + L +VP
Sbjct: 469 RLANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLARVPS 528
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVDA--------- 167
LPE T+LRL N+I+ L F LR+I+LS N+I +V A D
Sbjct: 529 HLPEYVTDLRLNDNEISVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELML 588
Query: 168 ------------FQGLKSLTS------------------------LTLNNNNLTYLPDGV 191
F+GL L + L+L +N +T + G
Sbjct: 589 TGNQLETVHGRMFRGLSGLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGA 648
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L T+ + N F C+CHL+WL +WL++ + +C P +K I D+ +
Sbjct: 649 FTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 708
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ + C P CP C C D +V C K
Sbjct: 709 FTCDGNDESS---------------------------CQLSPRCPEQCTCVDTVVRCSNK 741
Query: 312 GLNKVPILLPEATTEL----TYMVSIDRVDKVL----LYSYISNNFKRWTNRSRR----- 358
GL +P +P+ TEL ++ ++ R L L +N+ T+ +
Sbjct: 742 GLRALPKGMPKDVTELYLEGNHLTAVPRELSALRHLTLIDLSNNSISVLTDHTFSNMSHL 801
Query: 359 ----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P AF + LR + L NDI+ +P +F + L +
Sbjct: 802 STLILSYNRLRCIPVHAFDGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHL 852
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 143/294 (48%), Gaps = 57/294 (19%)
Query: 115 LNKVPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL ++T + L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 121 LRVLPELLFQSTPKLSRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRAL 180
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T
Sbjct: 181 RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFT 240
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
C AP H++G N+ D+ + E+ C G P +P A
Sbjct: 241 LCMAPVHLRGFNVADVQKKEYVCPG------------------------PHSEPPSCNAN 276
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP PC C++ IVDCR KGL ++P LPE E+
Sbjct: 277 SISCPSPCTCSNNIVDCRGKGLTEIPANLPEGIVEI------------------------ 312
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF YK+L+RI + +N I+++ P AF K L +
Sbjct: 313 ------RLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 360
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 89/276 (32%), Positives = 133/276 (48%), Gaps = 26/276 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CHL+WL +WL++ + +C P
Sbjct: 635 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPF 694
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C D +V C KGL +P +P
Sbjct: 695 FLKEIPIQDVAIQDFTCDGNDES---SCQLSPRCPEQCTCVDTVVRCSNKGLRALPKGMP 751
Query: 124 EATTELRLEQNDITELP-----------------------PKAFANYKRLRRIDLSKNQI 160
+ TEL LE N +T +P F+N L + LS N++
Sbjct: 752 KDVTELYLEGNHLTAVPRELSALRHLTLIDLSNNSISVLTDHTFSNMSHLSTLILSYNRL 811
Query: 161 SKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW 220
+ V AF GL+SL LTL+ N+++ +P+G F +L L L + N CDC L WL W
Sbjct: 812 RCIPVHAFDGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEW 871
Query: 221 LKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
+K + +C +P + + +L P H F+C G
Sbjct: 872 VKAGYKEPGIARCSSPEPMADRLLLTTPTHRFQCKG 907
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 21/126 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TL+ N+++ +P+G F +L L L + N CDC L WL W+K + +C +P
Sbjct: 829 TLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSSPE 888
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------------KPTGECAAEP------SCPHPCR 102
+ + +L P H F+C GPV+ K G C +P +CPH +
Sbjct: 889 PMADRLLLTTPTHRFQCKGPVDINIAAKCNACLSGPCKNNGTCTQDPVELYRCACPHSYK 948
Query: 103 CADGIV 108
D V
Sbjct: 949 GKDCTV 954
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTY-MVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ VDC GL VP +P L +I R+ K+ +F
Sbjct: 33 ACPTKCTCSAASVDCHGLGLRTVPRGIPRNAERLDLDRNNITRITKM--------DFAGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R LE N ++ + AF + K+L R+RL +N + LP F + +L R+
Sbjct: 85 KNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLRVLPELLFQSTPKLSRL 138
>gi|24106498|dbj|BAC21666.1| SLIT1-La splicing product [Rattus norvegicus]
Length = 1458
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 155/458 (33%), Positives = 229/458 (50%), Gaps = 82/458 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 187 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEP-------SCPHPCRCADGIVDCREKGLN 116
++G N+ ++ + EF CSG GE A P SCP C C++GIVDCR KGL
Sbjct: 247 SLRGLNVAEVQKSEFSCSG-----QGEAAQVPACTLSSGSCPAMCSCSNGIVDCRGKGLT 301
Query: 117 KVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
+P LPE TE+RLE N I +PP AF+ Y++LRRIDLS NQI+++A DAFQGL+SL S
Sbjct: 302 AIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNS 361
Query: 177 LTLNNNNLTYLPDGVFA------------------------------------------- 193
L L N +T LP GVF
Sbjct: 362 LVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLA 421
Query: 194 -----ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
L ++TL +++N FICDC+L WL +L+ P +C P + + I I
Sbjct: 422 KGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETTGARCATPRRLANKRIGQIK 481
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+F+CS Y + D+H NS EC ++ +CPH CRC V+C
Sbjct: 482 SKKFRCSAKEQ------YFIPGTEDYH-LNS--------ECTSDVACPHKCRCEASAVEC 526
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITEL 367
L+K+P +P++TTEL ++ + +L + + FK+ ++ + L N ++E+
Sbjct: 527 SGLKLSKIPERIPQSTTEL----RLNNNEISILEA--TGLFKKLSHLKKINLSNNKVSEI 580
Query: 368 PPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + + L N + + F LR +
Sbjct: 581 EDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTL 618
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 143/282 (50%), Gaps = 52/282 (18%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+A + L L +N + +P KAF L+ + L KNQIS + AF+ L+ L LTLNNNN
Sbjct: 133 QALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNN 192
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+ ++G N
Sbjct: 193 ITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLN 252
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
+ ++ + EF CSG + +C + + SCP C C++
Sbjct: 253 VAEVQKSEFSCSGQGEAAQVP--------------ACTL--------SSGSCPAMCSCSN 290
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQND 363
GIVDCR KGL +P LPE TE+ RLE N
Sbjct: 291 GIVDCRGKGLTAIPANLPETMTEI------------------------------RLELNG 320
Query: 364 ITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I +PP AF+ Y++LRRI L N I E+ P AF + L +
Sbjct: 321 IKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSL 362
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 187/451 (41%), Gaps = 91/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C P
Sbjct: 411 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETTGARCATPR 470
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + EC ++ +CPH CRC V+C
Sbjct: 471 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYHLNSECTSDVACPHKCRCEASAVECSGLK 530
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L+K+P +P++TTELRL N+I+ L F L++I+LS N++S++ F+G
Sbjct: 531 LSKIPERIPQSTTELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATS 590
Query: 171 ---------------------LKSLTSLTLNN------------------------NNLT 185
L L +L L N N++T
Sbjct: 591 VSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHIT 650
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+C L+WL WL++ + +C P ++ +
Sbjct: 651 TISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCHNPDFLRQIPLQ 710
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E C P CP C C D +
Sbjct: 711 DVAFPDFRCEEGQEEVG--------------------------CLPRPQCPQECTCLDTV 744
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L +P +P+ TEL +D L+ +S FK + L N I+
Sbjct: 745 VRCSNKHLQALPKGIPKNVTELY----LDGNQFTLVPGQLS-TFKYL--QLVDLSNNKIS 797
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L +F N +L + L N + +PP AF
Sbjct: 798 SLSNSSFTNMSQLTTLILSYNALQCIPPLAF 828
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 134/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N++T + G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 643 SLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCHNPD 702
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ C P CP C C D +V C K L +P +P
Sbjct: 703 FLRQIPLQDVAFPDFRCEEGQEEVG--CLPRPQCPQECTCLDTVVRCSNKHLQALPKGIP 760
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TEL L+ N T L P + +K L+ +DLS N+IS ++ +F + LT+L L+ N
Sbjct: 761 KNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 819
Query: 184 LTYLP------------------------DGVFAELFRLRTLRISENSFICDCHLSWLHR 219
L +P +G+FA++ L L I N CDCHL WL
Sbjct: 820 LQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSS 879
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 880 WVKTGYKEPGIARCAGPPEMEGKLLLTTPAKKFECQG 916
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 56/113 (49%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDC GL +P +P T L L N+IT + FA K+LR + L
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQL 92
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+NQI AF +K L L LN N L LP+ +F L L +SENS
Sbjct: 93 MENQIGAAERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSENSL 145
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 50/114 (43%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C VDC GL +P +P T L + I R+ K N+F
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHK--------NDFAGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I AF + K L R+RL +N + LP F N + L R+
Sbjct: 85 KQLRVLQLMENQIGAAERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRL 138
>gi|426252869|ref|XP_004020125.1| PREDICTED: LOW QUALITY PROTEIN: slit homolog 1 protein [Ovis aries]
Length = 1541
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 153/453 (33%), Positives = 227/453 (50%), Gaps = 72/453 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 187 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTG-ECA-AEPSCPHPCRCADGIVDCREKGLNKVPIL 121
++G N+ ++ + EF CSG E C + SCP C C++GIVDCR KGL +P
Sbjct: 247 GLRGLNVAEVQKSEFSCSGQGEAGRAPSCTLSSGSCPAMCACSNGIVDCRGKGLTAIPAN 306
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
LPEA TE+RLE N I +PP AF+ Y++LRRIDLS NQIS++A DAFQGL+SL SL L
Sbjct: 307 LPEAMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYG 366
Query: 182 NNLTYLPDGVFA------------------------------------------------ 193
N +T LP GVF
Sbjct: 367 NKITDLPRGVFGGLFTLQLLLLNANKINCIRLDAFQDLQNLSLLSLYDNKIQSLAKGTFT 426
Query: 194 ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFK 253
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I +F+
Sbjct: 427 SLRAIQTLHLAQNPFICDCNLKWLADFLRSNPIETSGARCASPRRLANKRIGQIKSKKFR 486
Query: 254 CSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL 313
CS Y + D+ + + EC ++ CPH CRC +V+C L
Sbjct: 487 CSAKEQ------YFIPGTEDY---------QLSSECNSDMVCPHKCRCEASMVECSSLKL 531
Query: 314 NKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPPKAF 372
K+P +P+AT EL ++ + +L + + FK+ T+ + L N ++E+ F
Sbjct: 532 TKIPERVPQATAEL----RLNNNEISILEA--TGMFKKLTHLKKINLSNNKVSEIEDGTF 585
Query: 373 ANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L N + + F LR +
Sbjct: 586 EGAASVSELHLTANQLESIRSGMFRGLDGLRTL 618
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 106/294 (36%), Positives = 151/294 (51%), Gaps = 55/294 (18%)
Query: 115 LNKVPILL---PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L+ +P LL +A + L L +N I +P KAF L+ + L KNQI + AF+ L
Sbjct: 121 LHTLPELLFQNNQALSRLDLSENTIQAIPRKAFRGATDLKNLQLDKNQIGCIEEGAFRAL 180
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T
Sbjct: 181 RGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFT 240
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C P+ ++G N+ ++ + EF CSG R+ SC + +
Sbjct: 241 QCSGPAGLRGLNVAEVQKSEFSCSGQGEAGRAP--------------SCTL--------S 278
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++GIVDCR KGL +P LPEA TE+
Sbjct: 279 SGSCPAMCACSNGIVDCRGKGLTAIPANLPEAMTEI------------------------ 314
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLE N I +PP AF+ Y++LRRI L N I+E+ P AF + L +
Sbjct: 315 ------RLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSL 362
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/458 (26%), Positives = 191/458 (41%), Gaps = 98/458 (21%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 411 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRSNPIETSGARCASPR 470
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + + EC ++ CPH CRC +V+C
Sbjct: 471 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYQLSSECNSDMVCPHKCRCEASMVECSSLK 530
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQGLKS 173
L K+P +P+AT ELRL N+I+ L F L++I+LS N++S++ F+G S
Sbjct: 531 LTKIPERVPQATAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGTFEGAAS 590
Query: 174 LTSLTLNNNNLTYLPDGVFAELFRLRTL------------RIS----------------- 204
++ L L N L + G+F L LRTL RIS
Sbjct: 591 VSELHLTANQLESIRSGMFRGLDGLRTLAGPRTSPMLRNNRISCIHNDSFTGLRNVRLLS 650
Query: 205 --------------------------ENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 238
N F C+C L+WL WL++ + +C P
Sbjct: 651 LYDNQIATISPGAFGSLRQVAGRNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPDF 710
Query: 239 IKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHP 298
++ + D+ +F+C E G C P CP
Sbjct: 711 LRQIPLQDVASPDFRCEEGQEE--------------------------GGCLPRPQCPQE 744
Query: 299 CRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRR 358
C C D +V C K L +P +P+ TEL +D L+ + +S FK +
Sbjct: 745 CACLDTVVRCSNKHLQTLPKGIPKNVTELY----LDGNQFTLVPAQLS-TFKYL--QLVD 797
Query: 359 LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L N I+ L +F N +L + L N + +PP AF
Sbjct: 798 LSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAF 835
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + + G F L ++ + N F C+C L+WL WL++ + +C P
Sbjct: 650 SLYDNQIATISPGAFGSLRQVAGRNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPD 709
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ G C P CP C C D +V C K L +P +P
Sbjct: 710 FLRQIPLQDVASPDFRCEEGQEE--GGCLPRPQCPQECACLDTVVRCSNKHLQTLPKGIP 767
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN--- 180
+ TEL L+ N T L P + +K L+ +DLS N+IS ++ +F + LT+L L+
Sbjct: 768 KNVTELYLDGNQFT-LVPAQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 826
Query: 181 ---------------------NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
N+++ L +G+FA++ L L I N CDCHL WL
Sbjct: 827 LQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSS 886
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 887 WVKTGYKEPGIARCAGPPDMEGKLLLTTPAKKFECQG 923
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 57/113 (50%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
CP C CA VDC GL VP +P T L L N+IT + FA K+LR + L
Sbjct: 33 GCPALCTCAGTTVDCHGTGLRAVPKNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQL 92
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+NQI V AF +K L L LN N L LP+ +F L L +SEN+
Sbjct: 93 MENQIGVVERGAFDDMKELERLRLNRNLLHTLPELLFQNNQALSRLDLSENTI 145
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNNFKRW 352
CP C CA VDC GL VP +P T L +I R+ K N+F
Sbjct: 33 GCPALCTCAGTTVDCHGTGLRAVPKNIPRNTERLELNGNNITRIHK--------NDFAGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I + AF + K L R+RL +N + LP F N + L R+
Sbjct: 85 KQLRVLQLMENQIGVVERGAFDDMKELERLRLNRNLLHTLPELLFQNNQALSRL 138
>gi|354471134|ref|XP_003497798.1| PREDICTED: slit homolog 1 protein-like [Cricetulus griseus]
Length = 1531
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 153/454 (33%), Positives = 230/454 (50%), Gaps = 74/454 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 187 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEK---PTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
++G N+ ++ + EF CSG E PT ++ SCP C C+ GIVDCR KGL +P
Sbjct: 247 SLRGLNVAEVQKSEFSCSGQGESTRVPTCTLSSG-SCPAMCTCSSGIVDCRGKGLTAIPA 305
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN 180
LPE TE+RLE N I +PP AF+ Y++LRRIDLS NQI+++A DAFQGL+SL SL L
Sbjct: 306 NLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 365
Query: 181 NNNLTYLPDGVFA----------------------------------------------- 193
N +T LP GVF
Sbjct: 366 GNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDTFQDLQSLSLLSLYDNKIQSLTKGTF 425
Query: 194 -ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I +F
Sbjct: 426 TSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANKRIGQIKSKKF 485
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CS Y + D+H NS EC ++ +CPH CRC +V+C
Sbjct: 486 RCSAKEQ------YFIPGTEDYH-LNS--------ECTSDVACPHKCRCEASVVECSSLK 530
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPPKA 371
L+K+P +P++T EL ++ + +L + + FK+ ++ + L N ++E+
Sbjct: 531 LSKIPERIPQSTAEL----RLNNNEISILEA--TGLFKKLSHLKKINLSNNKVSEIEDGT 584
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + + L N + + F LR +
Sbjct: 585 FEGAASVSELHLTANQLESIRSGMFRGLDGLRTL 618
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/282 (35%), Positives = 143/282 (50%), Gaps = 52/282 (18%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+A + L L +N + +P KAF L+ + L KNQIS + AF+ L+ L LTLNNNN
Sbjct: 133 QALSRLDLSENALQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNN 192
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+ ++G N
Sbjct: 193 ITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLN 252
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
+ ++ + EF CSG TR +C + + SCP C C+
Sbjct: 253 VAEVQKSEFSCSGQGESTRVP--------------TCTL--------SSGSCPAMCTCSS 290
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQND 363
GIVDCR KGL +P LPE TE+ RLE N
Sbjct: 291 GIVDCRGKGLTAIPANLPETMTEI------------------------------RLELNG 320
Query: 364 ITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I +PP AF+ Y++LRRI L N I E+ P AF + L +
Sbjct: 321 IKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSL 362
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 118/448 (26%), Positives = 186/448 (41%), Gaps = 91/448 (20%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
+N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P +
Sbjct: 414 DNKIQSLTKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLA 473
Query: 67 GQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKGLNK 117
+ I I +F+CS + EC ++ +CPH CRC +V+C L+K
Sbjct: 474 NKRIGQIKSKKFRCSAKEQYFIPGTEDYHLNSECTSDVACPHKCRCEASVVECSSLKLSK 533
Query: 118 VPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG------ 170
+P +P++T ELRL N+I+ L F L++I+LS N++S++ F+G
Sbjct: 534 IPERIPQSTAELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGAASVSE 593
Query: 171 ------------------LKSLTSLTLNN------------------------NNLTYLP 188
L L +L L N N++T +
Sbjct: 594 LHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTIS 653
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
G F L L TL + N F C+C L+WL WL++ + +C P ++ + D+
Sbjct: 654 PGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQDVA 713
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+F+C E C P CP C C D +V C
Sbjct: 714 FPDFRCEEGQEEV--------------------------GCLPRPQCPQECACLDTVVRC 747
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
K L +P +P+ TEL +D L+ +S FK + L N I+ L
Sbjct: 748 SNKHLQALPKGIPKNVTELY----LDGNQFTLVPGQLS-TFKYL--QLVDLSNNKISSLS 800
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAF 396
+F N +L + L N + +PP AF
Sbjct: 801 NSSFTNMSQLTTLILSYNALQCIPPLAF 828
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 134/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N++T + G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 643 SLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPD 702
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ C P CP C C D +V C K L +P +P
Sbjct: 703 FLRQIPLQDVAFPDFRCEEGQEEVG--CLPRPQCPQECACLDTVVRCSNKHLQALPKGIP 760
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TEL L+ N T L P + +K L+ +DLS N+IS ++ +F + LT+L L+ N
Sbjct: 761 KNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 819
Query: 184 LTYLP------------------------DGVFAELFRLRTLRISENSFICDCHLSWLHR 219
L +P +G+FA++ L L I N CDCHL WL
Sbjct: 820 LQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSS 879
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 880 WVKTGYKEPGIARCAGPPDMEGKLLLTTPAKKFECQG 916
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 57/113 (50%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDC GL +P +P T L L N+IT + FA K+LR + L
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQL 92
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+NQI V AF +K L L LN N L LP+ +F L L +SEN+
Sbjct: 93 MENQIGAVERGAFDDMKELERLRLNRNQLHVLPELLFQNNQALSRLDLSENAL 145
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C VDC GL +P +P T L + I R+ K N+F
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHK--------NDFAGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I + AF + K L R+RL +N + LP F N + L R+
Sbjct: 85 KQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHVLPELLFQNNQALSRL 138
>gi|4585574|gb|AAD25540.1|AF133730_1 Slit1 [Rattus norvegicus]
Length = 1530
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 155/458 (33%), Positives = 222/458 (48%), Gaps = 106/458 (23%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 187 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEP-------SCPHPCRCADGIVDCREKGLN 116
++G N+ ++ + EF CSG GE A P SCP C C++GIVDCR KGL
Sbjct: 247 SLRGLNVAEVQKSEFSCSG-----QGEAAQVPACTLSSGSCPAMCSCSNGIVDCRGKGLT 301
Query: 117 KVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
+P LPE TE+RLE N I +PP AF+ Y++LRRIDLS NQI+++A DAFQGL+SL S
Sbjct: 302 AIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNS 361
Query: 177 LTLNNNNLTYLPDGVFA------------------------------------------- 193
L L N +T LP GVF
Sbjct: 362 LVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLA 421
Query: 194 -----ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I
Sbjct: 422 KGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETTGARCASPRRLANKRIGQIK 481
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+F+CS Y + D+H NS EC ++ +CPH CRC +V+C
Sbjct: 482 SKKFRCSAKEQ------YFIPGTEDYH-LNS--------ECTSDVACPHKCRCEASVVEC 526
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
L+K+P +P++TTEL RL N+I+ L
Sbjct: 527 SGLKLSKIPERIPQSTTEL------------------------------RLNNNEISILE 556
Query: 369 PKA-FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F L++I L N ++E+ F + +
Sbjct: 557 ATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSEL 594
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 143/282 (50%), Gaps = 52/282 (18%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+A + L L +N + +P KAF L+ + L KNQIS + AF+ L+ L LTLNNNN
Sbjct: 133 QALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNN 192
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+ ++G N
Sbjct: 193 ITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLN 252
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
+ ++ + EF CSG + +C + + SCP C C++
Sbjct: 253 VAEVQKSEFSCSGQGEAAQVP--------------ACTL--------SSGSCPAMCSCSN 290
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQND 363
GIVDCR KGL +P LPE TE+ RLE N
Sbjct: 291 GIVDCRGKGLTAIPANLPETMTEI------------------------------RLELNG 320
Query: 364 ITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I +PP AF+ Y++LRRI L N I E+ P AF + L +
Sbjct: 321 IKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSL 362
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 188/451 (41%), Gaps = 92/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 411 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETTGARCASPR 470
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + EC ++ +CPH CRC +V+C
Sbjct: 471 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYHLNSECTSDVACPHKCRCEASVVECSGLK 530
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L+K+P +P++TTELRL N+I+ L F L++I+LS N++S++ F+G
Sbjct: 531 LSKIPERIPQSTTELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATS 590
Query: 171 ---------------------LKSLTSLTLNN------------------------NNLT 185
L L SL L N N++T
Sbjct: 591 VSELHLTANQLESVRSGMFRGLDGLWSLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHIT 650
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+C L+WL WL++ + +C P ++ +
Sbjct: 651 TISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQ 710
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E C P CP C C D +
Sbjct: 711 DVAFPDFRCEEGQEEVG--------------------------CLPRPQCPQECACLDTV 744
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L + +P+ TEL +D L+ +S FK + L N I+
Sbjct: 745 VRCSNKHLQLLKG-IPKNVTELY----LDGNQFTLVPGQLS-TFKYL--QLVDLSNNKIS 796
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L +F N +L + L N + +PP AF
Sbjct: 797 SLSNSSFTNMSQLTTLILSYNALQCIPPLAF 827
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 133/277 (48%), Gaps = 28/277 (10%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N++T + G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 643 SLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPD 702
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ C P CP C C D +V C K L + + P
Sbjct: 703 FLRQIPLQDVAFPDFRCEEGQEEVG--CLPRPQCPQECACLDTVVRCSNKHLQLLKGI-P 759
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TEL L+ N T L P + +K L+ +DLS N+IS ++ +F + LT+L L+ N
Sbjct: 760 KNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 818
Query: 184 LTYLP------------------------DGVFAELFRLRTLRISENSFICDCHLSWLHR 219
L +P +G+FA++ L L I N CDCHL WL
Sbjct: 819 LQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSS 878
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 879 WVKTGYKEPGIARCAGPPEMEGKLLLTTPAKKFECQG 915
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 55/113 (48%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDC GL +P +P T L L N+IT + FA K+LR + L
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITWIHKNDFAGLKQLRVLQL 92
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+N I V AF +K L LN N L LP+ +F L L +SENS
Sbjct: 93 MENPIGAVEPGAFDDMKELEPFQLNRNQLQMLPELLFQNNQALSRLDLSENSL 145
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C VDC GL +P +P T L ++ + ++ K+
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERL----ELNGNNITWIHKNDFAGLKQL- 87
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I + P AF + K L +L +N + LP F N + L R+
Sbjct: 88 -RVLQLMENPIGAVEPGAFDDMKELEPFQLNRNQLQMLPELLFQNNQALSRL 138
>gi|403259811|ref|XP_003922391.1| PREDICTED: slit homolog 1 protein [Saimiri boliviensis boliviensis]
Length = 1534
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 153/454 (33%), Positives = 231/454 (50%), Gaps = 74/454 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 187 TLNNNNITIIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEK---PTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
++G N+ ++ + EF CSGP E PT ++ SCP C C++GIVDCR KGL +P
Sbjct: 247 SLRGLNVAEVQKSEFSCSGPGEAGRVPTCTLSSG-SCPAMCTCSNGIVDCRGKGLTAIPA 305
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN 180
LPE TE+RLE N I +PP AF+ Y++LRRIDLS NQI+++A DAFQGL+SL SL L
Sbjct: 306 NLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 365
Query: 181 NNNLTYLPDGVFA----------------------------------------------- 193
N +T LP GVF
Sbjct: 366 GNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFLDLQNLSLLSLYDNKIQSLAKGTF 425
Query: 194 -ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I +F
Sbjct: 426 TSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANKRIGQIKSKKF 485
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CS + + + T+ + NS EC ++ CPH CRC +V+C
Sbjct: 486 RCS-----AKEQYFIP--GTEDYQLNS--------ECNSDVVCPHKCRCEANMVECSSLK 530
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPPKA 371
L K+P +P++T EL ++ + +L + + FK+ T+ + L N ++E+
Sbjct: 531 LTKIPERIPQSTAEL----RLNNNEISILEA--TGMFKKLTHLKKINLSNNKVSEIEDGT 584
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + + L N + + F LR +
Sbjct: 585 FEGASSVSELHLTANQLESIRSGMFRGLDGLRTL 618
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 149/294 (50%), Gaps = 55/294 (18%)
Query: 115 LNKVPILL---PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L+ +P LL +A + L L +N I +P KAF L+ + L KNQIS + AF+ L
Sbjct: 121 LHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRAL 180
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T
Sbjct: 181 RGLEVLTLNNNNITIIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFT 240
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C P+ ++G N+ ++ + EF CSG R +C + +
Sbjct: 241 QCSGPASLRGLNVAEVQKSEFSCSGPGEAGRVP--------------TCTL--------S 278
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++GIVDCR KGL +P LPE TE+
Sbjct: 279 SGSCPAMCTCSNGIVDCRGKGLTAIPANLPETMTEI------------------------ 314
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLE N I +PP AF+ Y++LRRI L N I E+ P AF + L +
Sbjct: 315 ------RLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSL 362
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 187/451 (41%), Gaps = 91/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 411 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPR 470
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + EC ++ CPH CRC +V+C
Sbjct: 471 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVVCPHKCRCEANMVECSSLK 530
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L K+P +P++T ELRL N+I+ L F L++I+LS N++S++ F+G
Sbjct: 531 LTKIPERIPQSTAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGTFEGASS 590
Query: 171 ---------------------LKSLTSLTLNN------------------------NNLT 185
L L +L L N N +T
Sbjct: 591 VSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIT 650
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+C L+WL WL++ + +C P ++ +
Sbjct: 651 TVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQ 710
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E G C P CP C C D +
Sbjct: 711 DVAFPDFRCEEGQEE--------------------------GGCLPRPQCPQECACLDTV 744
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L +P +P+ TEL +D L+ +S FK + L N I+
Sbjct: 745 VRCSNKHLRALPRGVPKNVTELY----LDGNQFTLVPGQLS-TFKYL--QLVDLSNNKIS 797
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L +F N +L + L N + +PP AF
Sbjct: 798 SLSNSSFTNMSQLTTLILSYNALQCIPPLAF 828
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 134/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 643 SLYDNQITTVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPD 702
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ G C P CP C C D +V C K L +P +P
Sbjct: 703 FLRQIPLQDVAFPDFRCEEGQEE--GGCLPRPQCPQECACLDTVVRCSNKHLRALPRGVP 760
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TEL L+ N T L P + +K L+ +DLS N+IS ++ +F + LT+L L+ N
Sbjct: 761 KNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 819
Query: 184 LTYLP------------------------DGVFAELFRLRTLRISENSFICDCHLSWLHR 219
L +P +G+FA++ L L I N CDCHL WL
Sbjct: 820 LQCIPPLAFQGLRSLRLLSLHGNDISTLREGIFADVTSLSHLAIGANPLYCDCHLRWLSS 879
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 880 WVKTGYKEPGIARCAGPPDMEGKLLLTTPAKKFECQG 916
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 57/113 (50%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDC GL +P +P T L L N+IT + FA K+LR + L
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQL 92
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+NQI V AF +K L L LN N L LP+ +F L L +SEN+
Sbjct: 93 MENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAI 145
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C VDC GL +P +P T L + I R+ K N+F
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHK--------NDFAGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I + AF + K L R+RL +N + LP F N + L R+
Sbjct: 85 KQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRL 138
>gi|283462280|gb|ADB22434.1| SLIT1 [Gallus gallus]
Length = 1513
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 157/456 (34%), Positives = 230/456 (50%), Gaps = 78/456 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C AP+
Sbjct: 194 TLNNNNITSIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLAQWLRQRPTIGLFTQCAAPA 253
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGE-CA-AEPSCPHPCRCADGIVDCREKGLNKVPIL 121
++G N+ +I ++EF CSG + + C+ + SCP C C++GIVDCR KGL +P
Sbjct: 254 QLRGLNVAEIQKNEFSCSGQADGVHAQLCSLSSGSCPAMCTCSNGIVDCRGKGLTAIPAN 313
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
LPE TE+RLE N I +PP AF+ YK+LRRIDLS NQIS++A DAFQGL+SL SL L
Sbjct: 314 LPETMTEIRLELNGIKSIPPGAFSPYKKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYG 373
Query: 182 NNLTYLPDGVF--------------------AELFR------------------------ 197
N +T LP GVF A+ F+
Sbjct: 374 NKITDLPKGVFGGLFALQLLLLNANKINCVRADAFQDLQNLSLLSLYDNKIQSLAKGTFT 433
Query: 198 ----LRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFK 253
++TL +++N F+CDC+L WL +L+ P +C +P + + I I +F+
Sbjct: 434 SLRAIQTLHLAQNPFVCDCNLKWLADFLRANPIETSGARCASPRRLANKRIGQIKSKKFR 493
Query: 254 CSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL 313
CS Y + D+ NS EC ++ CP CRC G+V+C L
Sbjct: 494 CSAKEQ------YFIPGTEDYQ-LNS--------ECNSDVVCPPKCRCEAGVVECSNLKL 538
Query: 314 NKVPILLPEATTEL---TYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPP 369
K+P +P++T EL +SI V FK+ + + L N ++E+
Sbjct: 539 TKIPERIPQSTAELRLNNNEISILEATGV---------FKKLPHLKKINLSNNKVSEIED 589
Query: 370 KAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
AF + + L N + + F LR +
Sbjct: 590 GAFEGAASVSELHLTVNQLESVRSGMFRGLDGLRTL 625
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 154/294 (52%), Gaps = 55/294 (18%)
Query: 115 LNKVPILL---PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L+ +P LL +A + L L +N I +P KAF L+ + L KNQIS + AF+ L
Sbjct: 128 LHTLPELLFQHNQALSRLDLSENFIQAIPRKAFRGATDLKNLQLDKNQISCIEDGAFRAL 187
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T
Sbjct: 188 RGLEVLTLNNNNITSIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLAQWLRQRPTIGLFT 247
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C AP+ ++G N+ +I ++EF CSG + ++ + CS +
Sbjct: 248 QCAAPAQLRGLNVAEIQKNEFSCSGQA----DGVHAQLCSL------------------S 285
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++GIVDCR KGL +P LPE TE+
Sbjct: 286 SGSCPAMCTCSNGIVDCRGKGLTAIPANLPETMTEI------------------------ 321
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLE N I +PP AF+ YK+LRRI L N I+E+ P AF + L +
Sbjct: 322 ------RLELNGIKSIPPGAFSPYKKLRRIDLSNNQISEIAPDAFQGLRSLNSL 369
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 127/477 (26%), Positives = 197/477 (41%), Gaps = 101/477 (21%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N F+CDC+L WL +L+ P +C +P
Sbjct: 418 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFVCDCNLKWLADFLRANPIETSGARCASPR 477
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + EC ++ CP CRC G+V+C
Sbjct: 478 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVVCPPKCRCEAGVVECSNLK 537
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L K+P +P++T ELRL N+I+ L F L++I+LS N++S++ AF+G
Sbjct: 538 LTKIPERIPQSTAELRLNNNEISILEATGVFKKLPHLKKINLSNNKVSEIEDGAFEGAAS 597
Query: 171 ---------------------LKSLTSLTLNN------------------------NNLT 185
L L +L L N N ++
Sbjct: 598 VSELHLTVNQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIS 657
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+C L+WL WL++ + +C P ++ +
Sbjct: 658 TIAPGAFDTLQSLSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQHPDFLRQIPLQ 717
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C ET C P CP C C D +
Sbjct: 718 DVAFPDFRCEEGQEET--------------------------SCIPRPQCPQECTCLDTV 751
Query: 306 VDCREKGLNKVPILLPEATTEL-------TYMVSIDRVDKVLLYSYISNN------FKRW 352
V C K L +P +P+ TEL T + K L +SNN +
Sbjct: 752 VRCSNKHLKALPRGIPKNVTELYLDGNQFTQVPGQLSTFKYLQLVDLSNNRISSLSNSSF 811
Query: 353 TNRSRR----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
TN S+ L N + +PP AF + LR + L NDI+ LP FA+ L +
Sbjct: 812 TNMSQLTTLILSYNSLQCIPPLAFEGLRSLRLLSLHGNDISTLPEGIFADVTSLSHL 868
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 154/325 (47%), Gaps = 36/325 (11%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N ++ + G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 650 SLYDNQISTIAPGAFDTLQSLSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQHPD 709
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ + C P CP C C D +V C K L +P +P
Sbjct: 710 FLRQIPLQDVAFPDFRCEEGQEETS--CIPRPQCPQECTCLDTVVRCSNKHLKALPRGIP 767
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN--- 180
+ TEL L+ N T++P + + +K L+ +DLS N+IS ++ +F + LT+L L+
Sbjct: 768 KNVTELYLDGNQFTQVPGQ-LSTFKYLQLVDLSNNRISSLSNSSFTNMSQLTTLILSYNS 826
Query: 181 ---------------------NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
N+++ LP+G+FA++ L L I N C C+L WL
Sbjct: 827 LQCIPPLAFEGLRSLRLLSLHGNDISTLPEGIFADVTSLSHLAIGANPLYCSCNLRWLSS 886
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
W+K + +C P ++G+ +L P +F+C G S I + +C +P S
Sbjct: 887 WVKTGYKEPGIARCAGPPDMEGKLLLTTPAKKFECQGPP----SLIVQAKC----NPCLS 938
Query: 280 CPVEKPTGECAAEPSCPHPCRCADG 304
P G C +P + C C G
Sbjct: 939 SPCRN-QGTCHNDPLGSYRCACPIG 962
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 57/111 (51%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC L VP +P T L L N+IT + F+ K+LR + L
Sbjct: 40 ACPPLCACSGTTVDCHGTALRAVPKSIPRGTERLELNGNNITRIHKNDFSGLKQLRVLQL 99
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
+NQIS V AF +K L L LN N L LP+ +F L L +SEN
Sbjct: 100 MENQISVVERGAFDDMKELERLRLNRNQLHTLPELLFQHNQALSRLDLSEN 150
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNNFKRW 352
+CP C C+ VDC L VP +P T L +I R+ K N+F
Sbjct: 40 ACPPLCACSGTTVDCHGTALRAVPKSIPRGTERLELNGNNITRIHK--------NDFSGL 91
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I+ + AF + K L R+RL +N + LP F + + L R+
Sbjct: 92 KQLRVLQLMENQISVVERGAFDDMKELERLRLNRNQLHTLPELLFQHNQALSRL 145
>gi|402873356|ref|XP_003900544.1| PREDICTED: slit homolog 3 protein-like [Papio anubis]
Length = 726
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 156/451 (34%), Positives = 220/451 (48%), Gaps = 76/451 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 156 TLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFTLCMAPV 215
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ D+ + E+ C P +P A SCP PC C++ IVDCR KGL ++P LP
Sbjct: 216 HLRGFNVADVQKKEYVCPAPHSEPPSCNANSISCPSPCTCSNNIVDCRGKGLTEIPANLP 275
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N
Sbjct: 276 EGIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 335
Query: 184 LT------------------------------------------------YLPDGVFAEL 195
+T + G+FA L
Sbjct: 336 ITEIAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPL 395
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N F+CDCHL WL +L+ P +C +P + + I I +F+CS
Sbjct: 396 QSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCS 455
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
G S+ YR S+ EC + CP CRC IVDC + L +
Sbjct: 456 G------SEDYRSRFSS---------------ECFMDLVCPEKCRCEGTIVDCSNQKLAR 494
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P LPE T+L D VL + I FK+ N R L N I E+ AF
Sbjct: 495 IPSHLPEYVTDLRLN---DNEISVLEATGI---FKKLPNLRKINLSNNKIKEVREGAFDG 548
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ + L N + + + F L+ +
Sbjct: 549 AASVQELMLTGNQLETVHGRMFRGLSGLKTL 579
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 166/376 (44%), Gaps = 79/376 (21%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 378 SLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 437
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + + + EC + CP CRC IVDC + L ++P
Sbjct: 438 RLANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLARIPS 497
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVDA--------- 167
LPE T+LRL N+I+ L F LR+I+LS N+I +V A D
Sbjct: 498 HLPEYVTDLRLNDNEISVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELML 557
Query: 168 ------------FQGLKSLTS------------------------LTLNNNNLTYLPDGV 191
F+GL L + L+L +N +T + G
Sbjct: 558 TGNQLETVHGRMFRGLSGLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGA 617
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L T+ + N F C+CHL+WL +WL++ + +C P +K I D+ +
Sbjct: 618 FTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 677
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ + C P CP C C + +V C K
Sbjct: 678 FTCDGNDESS---------------------------CQLSPRCPEQCTCVETVVRCSNK 710
Query: 312 GLNKVPILLPEATTEL 327
GL +P +P+ TEL
Sbjct: 711 GLRALPKGMPKDVTEL 726
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 132/275 (48%), Gaps = 54/275 (19%)
Query: 131 LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDG 190
L +N I +P KAF ++ + L N IS + AF+ L+ L LTLNNNN++ +
Sbjct: 109 LSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVT 168
Query: 191 VFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEH 250
F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP H++G N+ D+ +
Sbjct: 169 SFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFTLCMAPVHLRGFNVADVQKK 228
Query: 251 EFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCRE 310
E+ C P +P A SCP PC C++ IVDCR
Sbjct: 229 EYVCPA------------------------PHSEPPSCNANSISCPSPCTCSNNIVDCRG 264
Query: 311 KGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPK 370
KGL ++P LPE E+ RLEQN I +P
Sbjct: 265 KGLTEIPANLPEGIVEI------------------------------RLEQNSIKSIPAG 294
Query: 371 AFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
AF YK+L+RI + +N I+++ P AF K L +
Sbjct: 295 AFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 329
>gi|327260709|ref|XP_003215176.1| PREDICTED: slit homolog 3 protein-like, partial [Anolis
carolinensis]
Length = 1386
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 158/451 (35%), Positives = 224/451 (49%), Gaps = 76/451 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 49 TLNNNNITRIPLTSFNHMPKIRTLRLHSNYLYCDCHLAWLSDWLRQRRSVGQFTFCMAPV 108
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ D+ + E+ CSG +P A SCP PC C++ IVDCR KGL ++P LP
Sbjct: 109 HLRGFNVADVQKKEYVCSGSHTEPPSCNANSISCPSPCTCSNNIVDCRGKGLTEIPANLP 168
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLT-------- 175
E+ E+RLEQN I +PP AF+ YK+L+RID+SKNQIS +A DAF GLKSLT
Sbjct: 169 ESIVEIRLEQNSIKSIPPGAFSQYKKLKRIDISKNQISDIASDAFHGLKSLTSLVLYGNK 228
Query: 176 ----------------S------------------------LTLNNNNLTYLPDGVFAEL 195
L+L +N L + G+F L
Sbjct: 229 ITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLHNLNLLSLYDNKLQTISKGLFVPL 288
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N F+CDCHL WL +L+ P +C +P + + I I +F+CS
Sbjct: 289 QSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCS 348
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
GS + RSK TGEC + CP CRC IVDC + L +
Sbjct: 349 GSE-DYRSKF--------------------TGECFMDLICPEKCRCEGTIVDCSNQKLTR 387
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P LPE TT+L D VL + I FK+ + R L N I E+ F
Sbjct: 388 LPSHLPEYTTDLRLH---DNDISVLEATGI---FKKLPSLRKINLSNNKIKEIREGTFDG 441
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ + L N + + + F L+ +
Sbjct: 442 AAGVQELMLTGNQLESVHGRMFRGLVGLKTL 472
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 131/473 (27%), Positives = 202/473 (42%), Gaps = 100/473 (21%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+F L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 271 SLYDNKLQTISKGLFVPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 330
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K TGEC + CP CRC IVDC + L ++P
Sbjct: 331 RLANKRISQIKSKKFRCSGSEDYRSKFTGECFMDLICPEKCRCEGTIVDCSNQKLTRLPS 390
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVDA--------- 167
LPE TT+LRL NDI+ L F LR+I+LS N+I ++ D
Sbjct: 391 HLPEYTTDLRLHDNDISVLEATGIFKKLPSLRKINLSNNKIKEIREGTFDGAAGVQELML 450
Query: 168 ------------FQGLKSLTS------------------------LTLNNNNLTYLPDGV 191
F+GL L + L+L +N +T + G
Sbjct: 451 TGNQLESVHGRMFRGLVGLKTLMLRSNMISCVNNDTFTGLSSVRLLSLYDNRITTITPGA 510
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L T+ + N F C+CHL+WL +WL++ + +C P +K I D+ +
Sbjct: 511 FNTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVATQD 570
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ VE C P CP C C D +V C +
Sbjct: 571 FTCDGN------------------------VES---SCHFSPRCPDQCTCIDSLVRCSNR 603
Query: 312 GLNKVPILLPEATTEL-------------------TYMVSIDRVDKVLLYSYISNNFKRW 352
GL +P +P+ TEL ++ + +L +Y +N +
Sbjct: 604 GLRFLPKGVPKDVTELYLEGNHLSAVPKELSMFRHLTLIDLSNNSISVLANYTFSNITQL 663
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L N + +P AF K LR + L NDI+ +P +F + L +
Sbjct: 664 S--TLILSYNRLRCIPVHAFNGLKSLRVLTLHGNDISTVPEGSFNDLTSLSHL 714
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/275 (35%), Positives = 138/275 (50%), Gaps = 54/275 (19%)
Query: 131 LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDG 190
L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T +P
Sbjct: 2 LSENQIQGIPRKAFRGITDVKNLQLDNNQISCIEDGAFRALRDLEILTLNNNNITRIPLT 61
Query: 191 VFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEH 250
F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP H++G N+ D+ +
Sbjct: 62 SFNHMPKIRTLRLHSNYLYCDCHLAWLSDWLRQRRSVGQFTFCMAPVHLRGFNVADVQKK 121
Query: 251 EFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCRE 310
E+ CSGS E P A SCP PC C++ IVDCR
Sbjct: 122 EYVCSGSHTE------------------------PPSCNANSISCPSPCTCSNNIVDCRG 157
Query: 311 KGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPK 370
KGL ++P LPE+ E+ RLEQN I +PP
Sbjct: 158 KGLTEIPANLPESIVEI------------------------------RLEQNSIKSIPPG 187
Query: 371 AFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
AF+ YK+L+RI + +N I+++ AF K L +
Sbjct: 188 AFSQYKKLKRIDISKNQISDIASDAFHGLKSLTSL 222
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 137/278 (49%), Gaps = 28/278 (10%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CHL+WL +WL++ + +C P
Sbjct: 497 SLYDNRITTITPGAFNTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPF 556
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G VE C P CP C C D +V C +GL +P +P
Sbjct: 557 FLKEIPIQDVATQDFTCDGNVES---SCHFSPRCPDQCTCIDSLVRCSNRGLRFLPKGVP 613
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVA------------------- 164
+ TEL LE N ++ +P K + ++ L IDLS N IS +A
Sbjct: 614 KDVTELYLEGNHLSAVP-KELSMFRHLTLIDLSNNSISVLANYTFSNITQLSTLILSYNR 672
Query: 165 -----VDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
V AF GLKSL LTL+ N+++ +P+G F +L L L + N CDC L WL
Sbjct: 673 LRCIPVHAFNGLKSLRVLTLHGNDISTVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSE 732
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGS 257
W+K + +C P + + +L P H F+C G+
Sbjct: 733 WVKAGYKEPGIARCSTPDDMTDRLLLTTPTHHFQCKGA 770
>gi|432113111|gb|ELK35689.1| Slit like protein 1 protein [Myotis davidii]
Length = 1411
Score = 258 bits (658), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 151/453 (33%), Positives = 229/453 (50%), Gaps = 72/453 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 97 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 156
Query: 64 HIKGQNILDIPEHEFKCSGPVEKP-TGECA-AEPSCPHPCRCADGIVDCREKGLNKVPIL 121
++G N+ ++ + EF CSG E C + SCP C C++GIVDCR KGL +P
Sbjct: 157 SLRGLNVAEVQKSEFSCSGQGEAGHVPSCTLSSGSCPAMCSCSNGIVDCRGKGLTAIPAN 216
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
LPE TE+RLE N I +PP AF+ Y++LRRIDLS NQI+++A DAFQGL+SL SL L
Sbjct: 217 LPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYG 276
Query: 182 NNLTYLPDGVFA------------------------------------------------ 193
N +T LP GVF
Sbjct: 277 NKITDLPRGVFGGLYNLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFT 336
Query: 194 ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFK 253
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I +F+
Sbjct: 337 SLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPGRLANKRIGQIKSKKFR 396
Query: 254 CSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL 313
CS + + + T+ + NS EC ++ CPH CRC G+ +C L
Sbjct: 397 CS-----AKEQYFIP--GTEDYQLNS--------ECNSDVVCPHKCRCEAGVAECSSLRL 441
Query: 314 NKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPPKAF 372
K+P +P++T EL ++ + +L + + FK+ ++ + L N ++E+ AF
Sbjct: 442 TKIPERIPQSTAEL----RLNNNEISILEA--TGMFKKLSHLKKINLSNNKVSEIEDGAF 495
Query: 373 ANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L N + + F LR +
Sbjct: 496 EGAASVSELHLTANQLESIRSGMFRGLDGLRTL 528
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/277 (36%), Positives = 139/277 (50%), Gaps = 52/277 (18%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF L+ + L KNQIS + AF+ L+ L LTLNNNN+T +P
Sbjct: 48 LDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIP 107
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+ ++G N+ ++
Sbjct: 108 VSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLNVAEVQ 167
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CSG SC + + SCP C C++GIVDC
Sbjct: 168 KSEFSCSGQGEAGHVP--------------SCTL--------SSGSCPAMCSCSNGIVDC 205
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL +P LPE TE+ RLE N I +P
Sbjct: 206 RGKGLTAIPANLPETMTEI------------------------------RLELNGIKSIP 235
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ Y++LRRI L N I E+ P AF + L +
Sbjct: 236 PGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSL 272
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 124/428 (28%), Positives = 196/428 (45%), Gaps = 36/428 (8%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 321 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPG 380
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + EC ++ CPH CRC G+ +C
Sbjct: 381 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVVCPHKCRCEAGVAECSSLR 440
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQGLKS 173
L K+P +P++T ELRL N+I+ L F L++I+LS N++S++ AF+G S
Sbjct: 441 LTKIPERIPQSTAELRLNNNEISILEATGMFKKLSHLKKINLSNNKVSEIEDGAFEGAAS 500
Query: 174 LTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKC 233
++ L L N L + G+F L LRTL + N C + S+ L+ L LY
Sbjct: 501 VSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSF--TGLRNVRLLSLYDNQ 558
Query: 234 FAP------SHIKGQNILDIPEHEFKCS------GSSMETRSKIY----REECSTDFHPY 277
A ++ + L++ + F C+ G + R + R F
Sbjct: 559 IATISPGAFDTLQALSTLNLLANPFNCNCRLAWLGDWLRKRKIVTGNPRRHYEGLPFTDV 618
Query: 278 NSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVD 337
S P ++ G C P CP C C D +V C K L +P +P+ TEL +D
Sbjct: 619 ASSPGQE-EGSCLPRPQCPQECACLDTVVRCSNKHLQGLPKGIPKNVTELY----LDGNQ 673
Query: 338 KVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFA 397
L+ +S +K + L N I+ L +F N +L + L NDI+ LP FA
Sbjct: 674 FTLVPGQLS-TYKYL--QLVDLSNNKISSLSNSSFTNMSQLTTLSLHGNDISTLPEGIFA 730
Query: 398 NYKRLRRM 405
+ L +
Sbjct: 731 DVTALSHL 738
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 150/302 (49%), Gaps = 23/302 (7%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + + G F L L TL + N F C+C L+WL WL++ + +
Sbjct: 553 SLYDNQIATISPGAFDTLQALSTLNLLANPFNCNCRLAWLGDWLRKRKIVTGNPR----R 608
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H +G D+ S P ++ G C P CP C C D +V C K L +P +P
Sbjct: 609 HYEGLPFTDVA------SSPGQE-EGSCLPRPQCPQECACLDTVVRCSNKHLQGLPKGIP 661
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TEL L+ N T L P + YK L+ +DLS N+IS ++ +F + LT+L+L+ N+
Sbjct: 662 KNVTELYLDGNQFT-LVPGQLSTYKYLQLVDLSNNKISSLSNSSFTNMSQLTTLSLHGND 720
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
++ LP+G+FA++ L L I N CDCHL WL W+K + +C P ++G+
Sbjct: 721 ISTLPEGIFADVTALSHLAIGANPLHCDCHLRWLSSWVKTGYKEPGIARCAGPPDMEGKL 780
Query: 244 ILDIPEHEFKCSG-SSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCA 302
+L P +F+C G ++ ++K P S P + G C +P + C C+
Sbjct: 781 LLTTPAKKFECQGPPTLAVQAKC---------DPCLSSPCQN-QGSCHNDPLQGYRCACS 830
Query: 303 DG 304
G
Sbjct: 831 SG 832
>gi|20521105|dbj|BAA32465.3| MEGF4 [Homo sapiens]
Length = 1618
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 154/454 (33%), Positives = 229/454 (50%), Gaps = 74/454 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 271 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 330
Query: 64 HIKGQNILDIPEHEFKCSGPVEK---PTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
++G N+ ++ + EF CSG E PT ++ SCP C C++GIVDCR KGL +P
Sbjct: 331 SLRGLNVAEVQKSEFSCSGQGEAGRVPTCTLSSG-SCPAMCTCSNGIVDCRGKGLTAIPA 389
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN 180
LPE TE+RLE N I +PP AF+ Y++LRRIDLS NQI+++A DAFQGL+SL SL L
Sbjct: 390 NLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 449
Query: 181 NNNLTYLPDGVFA----------------------------------------------- 193
N +T LP GVF
Sbjct: 450 GNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTF 509
Query: 194 -ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I +F
Sbjct: 510 TSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANKRIGQIKSKKF 569
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CS Y + D+ NS EC ++ CPH CRC +V+C
Sbjct: 570 RCSAKEQ------YFIPGTEDYQ-LNS--------ECNSDVVCPHKCRCEANVVECSSLK 614
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPPKA 371
L K+P +P++T EL ++ + +L + + FK+ T+ + L N ++E+ A
Sbjct: 615 LTKIPERIPQSTAEL----RLNNNEISILEA--TGMFKKLTHLKKINLSNNKVSEIEDGA 668
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + + L N + + F LR +
Sbjct: 669 FEGAASVSELHLTANQLESIRSGMFRGLDGLRTL 702
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/282 (35%), Positives = 143/282 (50%), Gaps = 52/282 (18%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+A + L L +N I +P KAF L+ + L KNQIS + AF+ L+ L LTLNNNN
Sbjct: 217 QALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNN 276
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+ ++G N
Sbjct: 277 ITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLN 336
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
+ ++ + EF CSG R +C + + SCP C C++
Sbjct: 337 VAEVQKSEFSCSGQGEAGRVP--------------TCTL--------SSGSCPAMCTCSN 374
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQND 363
GIVDCR KGL +P LPE TE+ RLE N
Sbjct: 375 GIVDCRGKGLTAIPANLPETMTEI------------------------------RLELNG 404
Query: 364 ITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I +PP AF+ Y++LRRI L N I E+ P AF + L +
Sbjct: 405 IKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSL 446
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 188/451 (41%), Gaps = 91/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 495 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPR 554
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + EC ++ CPH CRC +V+C
Sbjct: 555 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVVCPHKCRCEANVVECSSLK 614
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L K+P +P++T ELRL N+I+ L F L++I+LS N++S++ AF+G
Sbjct: 615 LTKIPERIPQSTAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAAS 674
Query: 171 ---------------------LKSLTSLTLNN------------------------NNLT 185
L L +L L N N +T
Sbjct: 675 VSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIT 734
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+C L+WL WL++ + +C P ++ +
Sbjct: 735 TVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWLRKRKIVTGNPRCQNPDFLRQIPLQ 794
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E G C P CP C C D +
Sbjct: 795 DVAFPDFRCEEGQEE--------------------------GGCLPRPQCPQECACLDTV 828
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L +P +P+ TEL +D L+ +S FK + L N I+
Sbjct: 829 VRCSNKHLRALPKGIPKNVTELY----LDGNQFTLVPGQLS-TFKYL--QLVDLSNNKIS 881
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L +F N +L + L N + +PP AF
Sbjct: 882 SLSNSSFTNMSQLTTLILSYNALQCIPPLAF 912
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 135/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 727 SLYDNQITTVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWLRKRKIVTGNPRCQNPD 786
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ G C P CP C C D +V C K L +P +P
Sbjct: 787 FLRQIPLQDVAFPDFRCEEGQEE--GGCLPRPQCPQECACLDTVVRCSNKHLRALPKGIP 844
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN--- 180
+ TEL L+ N T L P + +K L+ +DLS N+IS ++ +F + LT+L L+
Sbjct: 845 KNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 903
Query: 181 ---------------------NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
N+++ L +G+FA++ L L I N CDCHL WL
Sbjct: 904 LQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSS 963
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 964 WVKTGYKEPGIARCAGPQDMEGKLLLTTPAKKFECQG 1000
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 57/113 (50%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDC GL +P +P T L L N+IT + FA K+LR + L
Sbjct: 117 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQL 176
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+NQI V AF +K L L LN N L LP+ +F L L +SEN+
Sbjct: 177 MENQIGVVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAI 229
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C VDC GL +P +P T L + I R+ K N+F
Sbjct: 117 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHK--------NDFAGL 168
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I + AF + K L R+RL +N + LP F N + L R+
Sbjct: 169 KQLRVLQLMENQIGVVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRL 222
>gi|363735514|ref|XP_421715.3| PREDICTED: slit homolog 1 protein [Gallus gallus]
Length = 1544
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 156/456 (34%), Positives = 230/456 (50%), Gaps = 78/456 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C AP+
Sbjct: 194 TLNNNNITSIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLAQWLRQRPTIGLFTQCAAPA 253
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGE-CA-AEPSCPHPCRCADGIVDCREKGLNKVPIL 121
++G N+ +I ++EF CSG + + C+ + SCP C C++GIVDCR KGL +P
Sbjct: 254 QLRGLNVAEIQKNEFSCSGQADGVHAQLCSLSSGSCPAMCTCSNGIVDCRGKGLTAIPAN 313
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
LPE TE+RLE N I +PP AF+ YK+LRRIDLS NQIS++A DAFQGL+SL SL L
Sbjct: 314 LPETMTEIRLELNGIKSIPPGAFSPYKKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYG 373
Query: 182 NNLTYLPDGVF--------------------AELFR------------------------ 197
N +T LP GVF A+ F+
Sbjct: 374 NKITDLPKGVFGGLFALQLLLLNANKINCVRADAFQDLQNLSLLSLYDNKIQSLAKGTFT 433
Query: 198 ----LRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFK 253
++TL +++N F+CDC+L WL +L+ P +C +P + + I I +F+
Sbjct: 434 SLRAIQTLHLAQNPFVCDCNLKWLADFLRANPIETSGARCASPRRLANKRIGQIKSKKFR 493
Query: 254 CSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL 313
CS Y + D+ NS EC ++ CP CRC G+V+C L
Sbjct: 494 CSAKEQ------YFIPGTEDYQ-LNS--------ECNSDVVCPPKCRCEAGVVECSNLKL 538
Query: 314 NKVPILLPEATTEL---TYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPP 369
K+P +P++T EL +SI + FK+ + + L N ++E+
Sbjct: 539 TKIPERIPQSTAELRLNNNEISILEATGI---------FKKLPHLKKINLSNNKVSEIED 589
Query: 370 KAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
AF + + L N + + F LR +
Sbjct: 590 GAFEGAASVSELHLTVNQLESVRSGMFRGLDGLRTL 625
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 154/294 (52%), Gaps = 55/294 (18%)
Query: 115 LNKVPILL---PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L+ +P LL +A + L L +N I +P KAF L+ + L KNQIS + AF+ L
Sbjct: 128 LHTLPELLFQHNQALSRLDLSENFIQAIPRKAFRGATDLKNLQLDKNQISCIEDGAFRAL 187
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T
Sbjct: 188 RGLEVLTLNNNNITSIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLAQWLRQRPTIGLFT 247
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C AP+ ++G N+ +I ++EF CSG + ++ + CS +
Sbjct: 248 QCAAPAQLRGLNVAEIQKNEFSCSGQA----DGVHAQLCSL------------------S 285
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++GIVDCR KGL +P LPE TE+
Sbjct: 286 SGSCPAMCTCSNGIVDCRGKGLTAIPANLPETMTEI------------------------ 321
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLE N I +PP AF+ YK+LRRI L N I+E+ P AF + L +
Sbjct: 322 ------RLELNGIKSIPPGAFSPYKKLRRIDLSNNQISEIAPDAFQGLRSLNSL 369
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 127/477 (26%), Positives = 197/477 (41%), Gaps = 101/477 (21%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N F+CDC+L WL +L+ P +C +P
Sbjct: 418 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFVCDCNLKWLADFLRANPIETSGARCASPR 477
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + EC ++ CP CRC G+V+C
Sbjct: 478 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVVCPPKCRCEAGVVECSNLK 537
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L K+P +P++T ELRL N+I+ L F L++I+LS N++S++ AF+G
Sbjct: 538 LTKIPERIPQSTAELRLNNNEISILEATGIFKKLPHLKKINLSNNKVSEIEDGAFEGAAS 597
Query: 171 ---------------------LKSLTSLTLNN------------------------NNLT 185
L L +L L N N ++
Sbjct: 598 VSELHLTVNQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIS 657
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+C L+WL WL++ + +C P ++ +
Sbjct: 658 TIAPGAFDTLQSLSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQHPDFLRQIPLQ 717
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C ET C P CP C C D +
Sbjct: 718 DVAFPDFRCEEGQEET--------------------------SCIPRPQCPQECTCLDTV 751
Query: 306 VDCREKGLNKVPILLPEATTEL-------TYMVSIDRVDKVLLYSYISNN------FKRW 352
V C K L +P +P+ TEL T + K L +SNN +
Sbjct: 752 VRCSNKHLKALPRGIPKNVTELYLDGNQFTQVPGQLSTFKYLQLVDLSNNRISSLSNSSF 811
Query: 353 TNRSRR----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
TN S+ L N + +PP AF + LR + L NDI+ LP FA+ L +
Sbjct: 812 TNMSQLTTLILSYNSLQCIPPLAFEGLRSLRLLSLHGNDISTLPEGIFADVTSLSHL 868
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 154/325 (47%), Gaps = 36/325 (11%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N ++ + G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 650 SLYDNQISTIAPGAFDTLQSLSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQHPD 709
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ + C P CP C C D +V C K L +P +P
Sbjct: 710 FLRQIPLQDVAFPDFRCEEGQEETS--CIPRPQCPQECTCLDTVVRCSNKHLKALPRGIP 767
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN--- 180
+ TEL L+ N T++P + + +K L+ +DLS N+IS ++ +F + LT+L L+
Sbjct: 768 KNVTELYLDGNQFTQVPGQ-LSTFKYLQLVDLSNNRISSLSNSSFTNMSQLTTLILSYNS 826
Query: 181 ---------------------NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
N+++ LP+G+FA++ L L I N C C+L WL
Sbjct: 827 LQCIPPLAFEGLRSLRLLSLHGNDISTLPEGIFADVTSLSHLAIGANPLYCSCNLRWLSS 886
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
W+K + +C P ++G+ +L P +F+C G S I + +C +P S
Sbjct: 887 WVKTGYKEPGIARCAGPPDMEGKLLLTTPAKKFECQGPP----SLIVQAKC----NPCLS 938
Query: 280 CPVEKPTGECAAEPSCPHPCRCADG 304
P G C +P + C C G
Sbjct: 939 SPCRN-QGTCHNDPLGSYRCACPIG 962
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 57/111 (51%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC L VP +P T L L N+IT + F+ K+LR + L
Sbjct: 40 ACPPLCACSGTTVDCHGTALRAVPKSIPRGTERLELNGNNITRIHKNDFSGLKQLRVLQL 99
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
+NQIS V AF +K L L LN N L LP+ +F L L +SEN
Sbjct: 100 MENQISVVERGAFDDMKELERLRLNRNQLHTLPELLFQHNQALSRLDLSEN 150
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNNFKRW 352
+CP C C+ VDC L VP +P T L +I R+ K N+F
Sbjct: 40 ACPPLCACSGTTVDCHGTALRAVPKSIPRGTERLELNGNNITRIHK--------NDFSGL 91
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I+ + AF + K L R+RL +N + LP F + + L R+
Sbjct: 92 KQLRVLQLMENQISVVERGAFDDMKELERLRLNRNQLHTLPELLFQHNQALSRL 145
>gi|355750408|gb|EHH54746.1| hypothetical protein EGM_15640, partial [Macaca fascicularis]
Length = 1500
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 155/451 (34%), Positives = 220/451 (48%), Gaps = 76/451 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 164 TLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFTLCMAPV 223
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ D+ + E+ C P +P A SCP PC C++ IVDCR KGL ++P LP
Sbjct: 224 HLRGFNVADVQKKEYVCPAPHSEPPSCNANSISCPSPCTCSNNIVDCRGKGLTEIPANLP 283
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N
Sbjct: 284 EGIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 343
Query: 184 LT------------------------------------------------YLPDGVFAEL 195
+T + G+FA L
Sbjct: 344 ITEIAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPL 403
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N F+CDCHL WL +L+ P +C +P + + I I +F+CS
Sbjct: 404 QSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCS 463
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
GS + RS+ + EC + CP CRC IVDC + L +
Sbjct: 464 GSE-DYRSRF--------------------SSECFMDLVCPEKCRCEGTIVDCSNQKLAR 502
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P LPE T+L D VL + I FK+ N R L N I E+ AF
Sbjct: 503 IPSHLPEYVTDLRLN---DNEISVLEATGI---FKKLPNLRKINLSNNKIKEVREGAFDG 556
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ + L N + + + F L+ +
Sbjct: 557 AASVQELMLTGNQLETVHGRVFRGLSSLKTL 587
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 130/471 (27%), Positives = 203/471 (43%), Gaps = 96/471 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 386 SLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 445
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + + + EC + CP CRC IVDC + L ++P
Sbjct: 446 RLANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLARIPS 505
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVDA--------- 167
LPE T+LRL N+I+ L F LR+I+LS N+I +V A D
Sbjct: 506 HLPEYVTDLRLNDNEISVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELML 565
Query: 168 ------------FQGLKSLTSLTLNNNN------------------------LTYLPDGV 191
F+GL SL +L L +N+ +T + G
Sbjct: 566 TGNQLETVHGRVFRGLSSLKTLMLRSNSISCVSNDTFAGLSSVRLLSLYDNRITTITPGA 625
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L T+ + N F C+CHL+WL +WL++ + +C P +K I D+ +
Sbjct: 626 FTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 685
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ + C P CP C C + +V C K
Sbjct: 686 FTCDGNDESS---------------------------CQLSPRCPEQCTCVETVVRCSNK 718
Query: 312 GLNKVPILLPEATTEL----TYMVSIDRVDKVL----LYSYISNNFKRWTNRSRR----- 358
GL +P +P+ TEL ++ ++ R L L +N+ TN +
Sbjct: 719 GLRALPKGMPKDVTELYLEGNHLTAVPRELSALRHLTLIDLSNNSISMLTNYTFSNMSHL 778
Query: 359 ----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P AF + LR + L NDI+ +P +F + L +
Sbjct: 779 STLILSYNRLRCIPIHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHL 829
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/294 (32%), Positives = 143/294 (48%), Gaps = 57/294 (19%)
Query: 115 LNKVPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL ++T T L+++ N + +P KAF ++ + L N IS + AF+ L
Sbjct: 98 LQVLPELLFQSTPKLTRLKVKANQLQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRAL 157
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T
Sbjct: 158 RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFT 217
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
C AP H++G N+ D+ + E+ C P +P A
Sbjct: 218 LCMAPVHLRGFNVADVQKKEYVCPA------------------------PHSEPPSCNAN 253
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP PC C++ IVDCR KGL ++P LPE E+
Sbjct: 254 SISCPSPCTCSNNIVDCRGKGLTEIPANLPEGIVEI------------------------ 289
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF YK+L+RI + +N I+++ P AF K L +
Sbjct: 290 ------RLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 337
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 134/277 (48%), Gaps = 28/277 (10%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CHL+WL +WL++ + +C P
Sbjct: 612 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPF 671
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C + +V C KGL +P +P
Sbjct: 672 FLKEIPIQDVAIQDFTCDGNDES---SCQLSPRCPEQCTCVETVVRCSNKGLRALPKGMP 728
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISK--------------------- 162
+ TEL LE N +T +P + + + L IDLS N IS
Sbjct: 729 KDVTELYLEGNHLTAVP-RELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNR 787
Query: 163 ---VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
+ + AF GL+SL LTL+ N+++ +P+G F +L L L + N CDC L WL
Sbjct: 788 LRCIPIHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSE 847
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C +P + + +L P H F+C G
Sbjct: 848 WVKAGYKEPGIARCSSPEPMADRLLLTTPTHRFQCKG 884
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TL+ N+++ +P+G F +L L L + N CDC L WL W+K + +C +P
Sbjct: 806 TLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSSPE 865
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ + +L P H F+C GPV+
Sbjct: 866 PMADRLLLTTPTHRFQCKGPVD 887
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTY-MVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ VDC GL VP +P L +I R+ K+ +F
Sbjct: 10 ACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKM--------DFAGL 61
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R LE N ++ + AF + K+L R+RL +N + LP F + +L R+
Sbjct: 62 KNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRL 115
>gi|119570342|gb|EAW49957.1| slit homolog 1 (Drosophila), isoform CRA_b [Homo sapiens]
Length = 1461
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 154/454 (33%), Positives = 229/454 (50%), Gaps = 74/454 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 187 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEK---PTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
++G N+ ++ + EF CSG E PT ++ SCP C C++GIVDCR KGL +P
Sbjct: 247 SLRGLNVAEVQKSEFSCSGQGEAGRVPTCTLSSG-SCPAMCTCSNGIVDCRGKGLTAIPA 305
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN 180
LPE TE+RLE N I +PP AF+ Y++LRRIDLS NQI+++A DAFQGL+SL SL L
Sbjct: 306 NLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 365
Query: 181 NNNLTYLPDGVFA----------------------------------------------- 193
N +T LP GVF
Sbjct: 366 GNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTF 425
Query: 194 -ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I +F
Sbjct: 426 TSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANKRIGQIKSKKF 485
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CS Y + D+ NS EC ++ CPH CRC +V+C
Sbjct: 486 RCSAKEQ------YFIPGTEDYQ-LNS--------ECNSDVVCPHKCRCEANVVECSSLK 530
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPPKA 371
L K+P +P++T EL ++ + +L + + FK+ T+ + L N ++E+ A
Sbjct: 531 LTKIPERIPQSTAEL----RLNNNEISILEA--TGMFKKLTHLKKINLSNNKVSEIEDGA 584
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + + L N + + F LR +
Sbjct: 585 FEGAASVSELHLTANQLESIRSGMFRGLDGLRTL 618
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/282 (35%), Positives = 143/282 (50%), Gaps = 52/282 (18%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+A + L L +N I +P KAF L+ + L KNQIS + AF+ L+ L LTLNNNN
Sbjct: 133 QALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNN 192
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+ ++G N
Sbjct: 193 ITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLN 252
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
+ ++ + EF CSG R +C + + SCP C C++
Sbjct: 253 VAEVQKSEFSCSGQGEAGRVP--------------TCTL--------SSGSCPAMCTCSN 290
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQND 363
GIVDCR KGL +P LPE TE+ RLE N
Sbjct: 291 GIVDCRGKGLTAIPANLPETMTEI------------------------------RLELNG 320
Query: 364 ITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I +PP AF+ Y++LRRI L N I E+ P AF + L +
Sbjct: 321 IKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSL 362
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 188/451 (41%), Gaps = 91/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 411 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPR 470
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + EC ++ CPH CRC +V+C
Sbjct: 471 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVVCPHKCRCEANVVECSSLK 530
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L K+P +P++T ELRL N+I+ L F L++I+LS N++S++ AF+G
Sbjct: 531 LTKIPERIPQSTAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAAS 590
Query: 171 ---------------------LKSLTSLTLNN------------------------NNLT 185
L L +L L N N +T
Sbjct: 591 VSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIT 650
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+C L+WL WL++ + +C P ++ +
Sbjct: 651 TVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWLRKRKIVTGNPRCQNPDFLRQIPLQ 710
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E G C P CP C C D +
Sbjct: 711 DVAFPDFRCEEGQEE--------------------------GGCLPRPQCPQECACLDTV 744
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L +P +P+ TEL +D L+ +S FK + L N I+
Sbjct: 745 VRCSNKHLRALPKGIPKNVTELY----LDGNQFTLVPGQLS-TFKYL--QLVDLSNNKIS 797
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L +F N +L + L N + +PP AF
Sbjct: 798 SLSNSSFTNMSQLTTLILSYNALQCIPPLAF 828
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 135/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 643 SLYDNQITTVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWLRKRKIVTGNPRCQNPD 702
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ G C P CP C C D +V C K L +P +P
Sbjct: 703 FLRQIPLQDVAFPDFRCEEGQEE--GGCLPRPQCPQECACLDTVVRCSNKHLRALPKGIP 760
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN--- 180
+ TEL L+ N T L P + +K L+ +DLS N+IS ++ +F + LT+L L+
Sbjct: 761 KNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 819
Query: 181 ---------------------NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
N+++ L +G+FA++ L L I N CDCHL WL
Sbjct: 820 LQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSS 879
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 880 WVKTGYKEPGIARCAGPQDMEGKLLLTTPAKKFECQG 916
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 57/113 (50%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDC GL +P +P T L L N+IT + FA K+LR + L
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQL 92
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+NQI V AF +K L L LN N L LP+ +F L L +SEN+
Sbjct: 93 MENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAI 145
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C VDC GL +P +P T L + I R+ K N+F
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHK--------NDFAGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I + AF + K L R+RL +N + LP F N + L R+
Sbjct: 85 KQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRL 138
>gi|355782998|gb|EHH64919.1| hypothetical protein EGM_18251, partial [Macaca fascicularis]
Length = 1511
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 153/454 (33%), Positives = 231/454 (50%), Gaps = 74/454 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 164 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 223
Query: 64 HIKGQNILDIPEHEFKCSGPVEK---PTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
++G N+ ++ + EF CSG E PT ++ SCP C C++GIVDCR KGL +P
Sbjct: 224 SLRGLNVAEVQKSEFSCSGQGEAGRVPTCTLSSG-SCPAMCTCSNGIVDCRGKGLTAIPA 282
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN 180
LPE TE+RLE N I +PP AF+ Y++LRRIDLS NQI+++A DAFQGL+SL SL L
Sbjct: 283 NLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 342
Query: 181 NNNLTYLPDGVFA----------------------------------------------- 193
N +T LP GVF
Sbjct: 343 GNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTF 402
Query: 194 -ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I +F
Sbjct: 403 TSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLSNKRIGQIKSKKF 462
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CS + + + T+ + NS EC ++ CPH CRC +V+C
Sbjct: 463 RCS-----AKEQYFIP--GTEDYQLNS--------ECNSDVICPHKCRCEASVVECSSLK 507
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPPKA 371
L K+P +P++T EL ++ + +L + + FK+ T+ + L N ++E+ A
Sbjct: 508 LTKIPERIPQSTAEL----RLNNNEISILEA--TGMFKKLTHLKKINLSNNKVSEIEDGA 561
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + + L N + + F LR +
Sbjct: 562 FEGAASVSELHLTANQLESIRSGMFRGLDGLRTL 595
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 149/294 (50%), Gaps = 55/294 (18%)
Query: 115 LNKVPILL---PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L+ +P LL +A + L L +N I +P KAF L+ + L KNQI+ + AF+ L
Sbjct: 98 LHMLPELLFQNNQALSRLDLSENVIQAIPRKAFRGATDLKNLQLDKNQINCIEEGAFRAL 157
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T
Sbjct: 158 RGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFT 217
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C P+ ++G N+ ++ + EF CSG R +C + +
Sbjct: 218 QCSGPASLRGLNVAEVQKSEFSCSGQGEAGRVP--------------TCTL--------S 255
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++GIVDCR KGL +P LPE TE+
Sbjct: 256 SGSCPAMCTCSNGIVDCRGKGLTAIPANLPETMTEI------------------------ 291
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLE N I +PP AF+ Y++LRRI L N I E+ P AF + L +
Sbjct: 292 ------RLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSL 339
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 188/451 (41%), Gaps = 91/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 388 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPR 447
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + EC ++ CPH CRC +V+C
Sbjct: 448 RLSNKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVICPHKCRCEASVVECSSLK 507
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L K+P +P++T ELRL N+I+ L F L++I+LS N++S++ AF+G
Sbjct: 508 LTKIPERIPQSTAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAAS 567
Query: 171 ---------------------LKSLTSLTLNN------------------------NNLT 185
L L +L L N N +T
Sbjct: 568 VSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIT 627
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+C L+WL WL++ + +C P ++ +
Sbjct: 628 TVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWLRKRKIVTGNPRCQNPDFLRQIPLQ 687
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E G C P CP C C D +
Sbjct: 688 DVAFPDFRCEEGQEE--------------------------GGCLPRPQCPQECACLDTV 721
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L +P +P+ TEL +D L+ +S FK + L N I+
Sbjct: 722 VRCSNKHLRALPKGIPKNVTELY----LDGNQFTLVPGQLS-TFKYL--QLVDLSNNKIS 774
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L +F N +L + L N + +PP AF
Sbjct: 775 SLSNSSFTNMSQLTTLILSYNALQCIPPLAF 805
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 135/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 620 SLYDNQITTVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWLRKRKIVTGNPRCQNPD 679
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ G C P CP C C D +V C K L +P +P
Sbjct: 680 FLRQIPLQDVAFPDFRCEEGQEE--GGCLPRPQCPQECACLDTVVRCSNKHLRALPKGIP 737
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN--- 180
+ TEL L+ N T L P + +K L+ +DLS N+IS ++ +F + LT+L L+
Sbjct: 738 KNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 796
Query: 181 ---------------------NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
N+++ L +G+FA++ L L I N CDCHL WL
Sbjct: 797 LQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSS 856
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 857 WVKTGYKEPGIARCAGPLDMEGKLLLTTPAKKFECQG 893
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 55/111 (49%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDC GL +P +P T L L N+IT + F K+LR + L
Sbjct: 10 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFVGLKQLRVLQL 69
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
+NQI V AF +K L L LN N L LP+ +F L L +SEN
Sbjct: 70 MENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSEN 120
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C VDC GL +P +P T L + I R+ K N+F
Sbjct: 10 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHK--------NDFVGL 61
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I + AF + K L R+RL +N + LP F N + L R+
Sbjct: 62 KQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRL 115
>gi|355562670|gb|EHH19264.1| hypothetical protein EGK_19941 [Macaca mulatta]
Length = 1534
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 153/454 (33%), Positives = 231/454 (50%), Gaps = 74/454 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 187 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEK---PTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
++G N+ ++ + EF CSG E PT ++ SCP C C++GIVDCR KGL +P
Sbjct: 247 SLRGLNVAEVQKSEFSCSGQGEAGRVPTCTLSSG-SCPAMCTCSNGIVDCRGKGLTAIPA 305
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN 180
LPE TE+RLE N I +PP AF+ Y++LRRIDLS NQI+++A DAFQGL+SL SL L
Sbjct: 306 NLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 365
Query: 181 NNNLTYLPDGVFA----------------------------------------------- 193
N +T LP GVF
Sbjct: 366 GNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTF 425
Query: 194 -ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I +F
Sbjct: 426 TSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLSNKRIGQIKSKKF 485
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CS + + + T+ + NS EC ++ CPH CRC +V+C
Sbjct: 486 RCS-----AKEQYFIP--GTEDYQLNS--------ECNSDVICPHKCRCEASVVECSSLK 530
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPPKA 371
L K+P +P++T EL ++ + +L + + FK+ T+ + L N ++E+ A
Sbjct: 531 LTKIPERIPQSTAEL----RLNNNEISILEA--TGMFKKLTHLKKINLSNNKVSEIEDGA 584
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + + L N + + F LR +
Sbjct: 585 FEGAASVSELHLTANQLESIRSGMFRGLDGLRTL 618
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 149/294 (50%), Gaps = 55/294 (18%)
Query: 115 LNKVPILL---PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L+ +P LL +A + L L +N I +P KAF L+ + L KNQI+ + AF+ L
Sbjct: 121 LHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQINCIEEGAFRAL 180
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T
Sbjct: 181 RGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFT 240
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C P+ ++G N+ ++ + EF CSG R +C + +
Sbjct: 241 QCSGPASLRGLNVAEVQKSEFSCSGQGEAGRVP--------------TCTL--------S 278
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++GIVDCR KGL +P LPE TE+
Sbjct: 279 SGSCPAMCTCSNGIVDCRGKGLTAIPANLPETMTEI------------------------ 314
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLE N I +PP AF+ Y++LRRI L N I E+ P AF + L +
Sbjct: 315 ------RLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSL 362
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 188/451 (41%), Gaps = 91/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 411 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPR 470
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + EC ++ CPH CRC +V+C
Sbjct: 471 RLSNKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVICPHKCRCEASVVECSSLK 530
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L K+P +P++T ELRL N+I+ L F L++I+LS N++S++ AF+G
Sbjct: 531 LTKIPERIPQSTAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAAS 590
Query: 171 ---------------------LKSLTSLTLNN------------------------NNLT 185
L L +L L N N +T
Sbjct: 591 VSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIT 650
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+C L+WL WL++ + +C P ++ +
Sbjct: 651 TVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWLRKRKIVTGNPRCQNPDFLRQIPLQ 710
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E G C P CP C C D +
Sbjct: 711 DVAFPDFRCEEGQEE--------------------------GGCLPRPQCPQECACLDTV 744
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L +P +P+ TEL +D L+ +S FK + L N I+
Sbjct: 745 VRCSNKHLRALPKGIPKNVTELY----LDGNQFTLVPGQLS-TFKYL--QLVDLSNNKIS 797
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L +F N +L + L N + +PP AF
Sbjct: 798 SLSNSSFTNMSQLTTLILSYNALQCIPPLAF 828
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 135/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 643 SLYDNQITTVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWLRKRKIVTGNPRCQNPD 702
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ G C P CP C C D +V C K L +P +P
Sbjct: 703 FLRQIPLQDVAFPDFRCEEGQEE--GGCLPRPQCPQECACLDTVVRCSNKHLRALPKGIP 760
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN--- 180
+ TEL L+ N T L P + +K L+ +DLS N+IS ++ +F + LT+L L+
Sbjct: 761 KNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 819
Query: 181 ---------------------NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
N+++ L +G+FA++ L L I N CDCHL WL
Sbjct: 820 LQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSS 879
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 880 WVKTGYKEPGIARCAGPLDMEGKLLLTTPAKKFECQG 916
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 56/113 (49%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDC GL +P +P T L L N+IT + F K+LR + L
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFVGLKQLRVLQL 92
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+NQI V AF +K L L LN N L LP+ +F L L +SEN+
Sbjct: 93 MENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAI 145
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C VDC GL +P +P T L + I R+ K N+F
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHK--------NDFVGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I + AF + K L R+RL +N + LP F N + L R+
Sbjct: 85 KQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRL 138
>gi|383420933|gb|AFH33680.1| slit homolog 1 protein precursor [Macaca mulatta]
Length = 1534
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 153/454 (33%), Positives = 231/454 (50%), Gaps = 74/454 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 187 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEK---PTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
++G N+ ++ + EF CSG E PT ++ SCP C C++GIVDCR KGL +P
Sbjct: 247 SLRGLNVAEVQKSEFSCSGQGEAGRVPTCTLSSG-SCPAMCTCSNGIVDCRGKGLTAIPA 305
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN 180
LPE TE+RLE N I +PP AF+ Y++LRRIDLS NQI+++A DAFQGL+SL SL L
Sbjct: 306 NLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 365
Query: 181 NNNLTYLPDGVFA----------------------------------------------- 193
N +T LP GVF
Sbjct: 366 GNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTF 425
Query: 194 -ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I +F
Sbjct: 426 TSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLSNKRIGQIKSKKF 485
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CS + + + T+ + NS EC ++ CPH CRC +V+C
Sbjct: 486 RCS-----AKEQYFIP--GTEDYQLNS--------ECNSDVICPHKCRCEASVVECSSLK 530
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPPKA 371
L K+P +P++T EL ++ + +L + + FK+ T+ + L N ++E+ A
Sbjct: 531 LTKIPERIPQSTAEL----RLNNNEISILEA--TGMFKKLTHLKKINLSNNKVSEIEDGA 584
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + + L N + + F LR +
Sbjct: 585 FEGAASVSELHLTANQLESIRSGMFRGLDGLRTL 618
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 149/294 (50%), Gaps = 55/294 (18%)
Query: 115 LNKVPILL---PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L+ +P LL +A + L L +N I +P KAF L+ + L KNQI+ + AF+ L
Sbjct: 121 LHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQINCIEEGAFRAL 180
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T
Sbjct: 181 RGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFT 240
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C P+ ++G N+ ++ + EF CSG R +C + +
Sbjct: 241 QCSGPASLRGLNVAEVQKSEFSCSGQGEAGRVP--------------TCTL--------S 278
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++GIVDCR KGL +P LPE TE+
Sbjct: 279 SGSCPAMCTCSNGIVDCRGKGLTAIPANLPETMTEI------------------------ 314
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLE N I +PP AF+ Y++LRRI L N I E+ P AF + L +
Sbjct: 315 ------RLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSL 362
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 188/451 (41%), Gaps = 91/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 411 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPR 470
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + EC ++ CPH CRC +V+C
Sbjct: 471 RLSNKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVICPHKCRCEASVVECSSLK 530
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L K+P +P++T ELRL N+I+ L F L++I+LS N++S++ AF+G
Sbjct: 531 LTKIPERIPQSTAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAAS 590
Query: 171 ---------------------LKSLTSLTLNN------------------------NNLT 185
L L +L L N N +T
Sbjct: 591 VSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIT 650
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+C L+WL WL++ + +C P ++ +
Sbjct: 651 TVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWLRKRKIVTGNPRCQNPDFLRQIPLQ 710
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E G C P CP C C D +
Sbjct: 711 DVAFPDFRCEEGQEE--------------------------GGCLPRPQCPQECACLDTV 744
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L +P +P+ TEL +D L+ +S FK + L N I+
Sbjct: 745 VRCSNKHLRALPKGIPKNVTELY----LDGNQFTLVPGQLS-TFKYL--QLVDLSNNKIS 797
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L +F N +L + L N + +PP AF
Sbjct: 798 SLSNSSFTNMSQLTTLILSYNALQCIPPLAF 828
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 135/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 643 SLYDNQITTVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWLRKRKIVTGNPRCQNPD 702
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ G C P CP C C D +V C K L +P +P
Sbjct: 703 FLRQIPLQDVAFPDFRCEEGQEE--GGCLPRPQCPQECACLDTVVRCSNKHLRALPKGIP 760
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN--- 180
+ TEL L+ N T L P + +K L+ +DLS N+IS ++ +F + LT+L L+
Sbjct: 761 KNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 819
Query: 181 ---------------------NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
N+++ L +G+FA++ L L I N CDCHL WL
Sbjct: 820 LQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSS 879
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 880 WVKTGYKEPGIARCAGPLDMEGKLLLTTPAKKFECQG 916
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 56/113 (49%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDC GL +P +P T L L N+IT + F K+LR + L
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFVGLKQLRVLQL 92
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+NQI V AF +K L L LN N L LP+ +F L L +SEN+
Sbjct: 93 MENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAI 145
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C VDC GL +P +P T L + I R+ K N+F
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHK--------NDFVGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I + AF + K L R+RL +N + LP F N + L R+
Sbjct: 85 KQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRL 138
>gi|380797761|gb|AFE70756.1| slit homolog 1 protein precursor, partial [Macaca mulatta]
Length = 1527
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 153/454 (33%), Positives = 231/454 (50%), Gaps = 74/454 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 180 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 239
Query: 64 HIKGQNILDIPEHEFKCSGPVEK---PTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
++G N+ ++ + EF CSG E PT ++ SCP C C++GIVDCR KGL +P
Sbjct: 240 SLRGLNVAEVQKSEFSCSGQGEAGRVPTCTLSSG-SCPAMCTCSNGIVDCRGKGLTAIPA 298
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN 180
LPE TE+RLE N I +PP AF+ Y++LRRIDLS NQI+++A DAFQGL+SL SL L
Sbjct: 299 NLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 358
Query: 181 NNNLTYLPDGVFA----------------------------------------------- 193
N +T LP GVF
Sbjct: 359 GNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTF 418
Query: 194 -ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I +F
Sbjct: 419 TSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLSNKRIGQIKSKKF 478
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CS + + + T+ + NS EC ++ CPH CRC +V+C
Sbjct: 479 RCS-----AKEQYFIP--GTEDYQLNS--------ECNSDVICPHKCRCEASVVECSSLK 523
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPPKA 371
L K+P +P++T EL ++ + +L + + FK+ T+ + L N ++E+ A
Sbjct: 524 LTKIPERIPQSTAEL----RLNNNEISILEA--TGMFKKLTHLKKINLSNNKVSEIEDGA 577
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + + L N + + F LR +
Sbjct: 578 FEGAASVSELHLTANQLESIRSGMFRGLDGLRTL 611
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 149/294 (50%), Gaps = 55/294 (18%)
Query: 115 LNKVPILL---PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L+ +P LL +A + L L +N I +P KAF L+ + L KNQI+ + AF+ L
Sbjct: 114 LHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQINCIEEGAFRAL 173
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T
Sbjct: 174 RGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFT 233
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C P+ ++G N+ ++ + EF CSG R +C + +
Sbjct: 234 QCSGPASLRGLNVAEVQKSEFSCSGQGEAGRVP--------------TCTL--------S 271
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++GIVDCR KGL +P LPE TE+
Sbjct: 272 SGSCPAMCTCSNGIVDCRGKGLTAIPANLPETMTEI------------------------ 307
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLE N I +PP AF+ Y++LRRI L N I E+ P AF + L +
Sbjct: 308 ------RLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSL 355
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 188/451 (41%), Gaps = 91/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 404 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPR 463
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + EC ++ CPH CRC +V+C
Sbjct: 464 RLSNKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVICPHKCRCEASVVECSSLK 523
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L K+P +P++T ELRL N+I+ L F L++I+LS N++S++ AF+G
Sbjct: 524 LTKIPERIPQSTAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAAS 583
Query: 171 ---------------------LKSLTSLTLNN------------------------NNLT 185
L L +L L N N +T
Sbjct: 584 VSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIT 643
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+C L+WL WL++ + +C P ++ +
Sbjct: 644 TVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWLRKRKIVTGNPRCQNPDFLRQIPLQ 703
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E G C P CP C C D +
Sbjct: 704 DVAFPDFRCEEGQEE--------------------------GGCLPRPQCPQECACLDTV 737
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L +P +P+ TEL +D L+ +S FK + L N I+
Sbjct: 738 VRCSNKHLRALPKGIPKNVTELY----LDGNQFTLVPGQLS-TFKYL--QLVDLSNNKIS 790
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L +F N +L + L N + +PP AF
Sbjct: 791 SLSNSSFTNMSQLTTLILSYNALQCIPPLAF 821
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 135/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 636 SLYDNQITTVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWLRKRKIVTGNPRCQNPD 695
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ G C P CP C C D +V C K L +P +P
Sbjct: 696 FLRQIPLQDVAFPDFRCEEGQEE--GGCLPRPQCPQECACLDTVVRCSNKHLRALPKGIP 753
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN--- 180
+ TEL L+ N T L P + +K L+ +DLS N+IS ++ +F + LT+L L+
Sbjct: 754 KNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 812
Query: 181 ---------------------NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
N+++ L +G+FA++ L L I N CDCHL WL
Sbjct: 813 LQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSS 872
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 873 WVKTGYKEPGIARCAGPLDMEGKLLLTTPAKKFECQG 909
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 56/113 (49%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDC GL +P +P T L L N+IT + F K+LR + L
Sbjct: 26 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFVGLKQLRVLQL 85
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+NQI V AF +K L L LN N L LP+ +F L L +SEN+
Sbjct: 86 MENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAI 138
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C VDC GL +P +P T L + I R+ K N+F
Sbjct: 26 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHK--------NDFVGL 77
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I + AF + K L R+RL +N + LP F N + L R+
Sbjct: 78 KQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRL 131
>gi|397510152|ref|XP_003825466.1| PREDICTED: slit homolog 1 protein [Pan paniscus]
Length = 1534
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 153/454 (33%), Positives = 231/454 (50%), Gaps = 74/454 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 187 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEK---PTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
++G N+ ++ + EF CSG E PT ++ SCP C C++GIVDCR KGL +P
Sbjct: 247 SLRGLNVAEVQKSEFSCSGQGEAGRVPTCTLSSG-SCPAMCTCSNGIVDCRGKGLTAIPA 305
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN 180
LPE TE+RLE N I +PP AF+ Y++LRRIDLS NQI+++A DAFQGL+SL SL L
Sbjct: 306 NLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 365
Query: 181 NNNLTYLPDGVFA----------------------------------------------- 193
N +T LP GVF
Sbjct: 366 GNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTF 425
Query: 194 -ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I +F
Sbjct: 426 TSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANKRIGQIKSKKF 485
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CS + + + T+ + NS EC ++ CPH CRC +V+C
Sbjct: 486 RCS-----AKEQYFIP--GTEDYQLNS--------ECNSDVVCPHKCRCEANVVECSSLK 530
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPPKA 371
L K+P +P++T EL ++ + +L + + FK+ T+ + L N ++E+ A
Sbjct: 531 LTKIPERIPQSTAEL----RLNNNEISILEA--TGMFKKLTHLKKINLSNNKVSEIEDGA 584
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + + L N + + F LR +
Sbjct: 585 FEGAASVSELHLTANQLESIRSGMFRGLDGLRTL 618
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 149/294 (50%), Gaps = 55/294 (18%)
Query: 115 LNKVPILL---PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L+ +P LL +A + L L +N I +P KAF L+ + L KNQIS + AF+ L
Sbjct: 121 LHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRAL 180
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T
Sbjct: 181 RGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFT 240
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C P+ ++G N+ ++ + EF CSG R +C + +
Sbjct: 241 QCSGPASLRGLNVAEVQKSEFSCSGQGEAGRVP--------------TCTL--------S 278
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++GIVDCR KGL +P LPE TE+
Sbjct: 279 SGSCPAMCTCSNGIVDCRGKGLTAIPANLPETMTEI------------------------ 314
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLE N I +PP AF+ Y++LRRI L N I E+ P AF + L +
Sbjct: 315 ------RLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSL 362
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 188/451 (41%), Gaps = 91/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 411 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPR 470
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + EC ++ CPH CRC +V+C
Sbjct: 471 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVVCPHKCRCEANVVECSSLK 530
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L K+P +P++T ELRL N+I+ L F L++I+LS N++S++ AF+G
Sbjct: 531 LTKIPERIPQSTAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAAS 590
Query: 171 ---------------------LKSLTSLTLNN------------------------NNLT 185
L L +L L N N +T
Sbjct: 591 VSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIT 650
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+C L+WL WL++ + +C P ++ +
Sbjct: 651 TVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWLRKRKIVTGNPRCQNPDFLRQIPLQ 710
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E G C P CP C C D +
Sbjct: 711 DVAFPDFRCEEGQEE--------------------------GGCLPRPQCPQECACLDTV 744
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L +P +P+ TEL +D L+ +S FK + L N I+
Sbjct: 745 VRCSNKHLRALPKGIPKNVTELY----LDGNQFTLVPGQLS-TFKYL--QLVDLSNNKIS 797
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L +F N +L + L N + +PP AF
Sbjct: 798 SLSNSSFTNMSQLTTLILSYNALQCIPPLAF 828
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 135/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 643 SLYDNQITTVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWLRKRKIVTGNPRCQNPD 702
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ G C P CP C C D +V C K L +P +P
Sbjct: 703 FLRQIPLQDVAFPDFRCEEGQEE--GGCLPRPQCPQECACLDTVVRCSNKHLRALPKGIP 760
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN--- 180
+ TEL L+ N T L P + +K L+ +DLS N+IS ++ +F + LT+L L+
Sbjct: 761 KNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 819
Query: 181 ---------------------NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
N+++ L +G+FA++ L L I N CDCHL WL
Sbjct: 820 LQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSS 879
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 880 WVKTGYKEPGIARCAGPQDMEGKLLLTTPAKKFECQG 916
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 57/113 (50%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDC GL +P +P T L L N+IT + FA K+LR + L
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQL 92
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+NQI V AF +K L L LN N L LP+ +F L L +SEN+
Sbjct: 93 MENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAI 145
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C VDC GL +P +P T L + I R+ K N+F
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHK--------NDFAGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I + AF + K L R+RL +N + LP F N + L R+
Sbjct: 85 KQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRL 138
>gi|188528675|ref|NP_003052.2| slit homolog 1 protein precursor [Homo sapiens]
gi|145559530|sp|O75093.4|SLIT1_HUMAN RecName: Full=Slit homolog 1 protein; Short=Slit-1; AltName:
Full=Multiple epidermal growth factor-like domains
protein 4; Short=Multiple EGF-like domains protein 4;
Flags: Precursor
gi|119570343|gb|EAW49958.1| slit homolog 1 (Drosophila), isoform CRA_c [Homo sapiens]
gi|187955030|gb|AAI46852.1| Slit homolog 1 (Drosophila) [Homo sapiens]
Length = 1534
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 153/454 (33%), Positives = 231/454 (50%), Gaps = 74/454 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 187 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEK---PTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
++G N+ ++ + EF CSG E PT ++ SCP C C++GIVDCR KGL +P
Sbjct: 247 SLRGLNVAEVQKSEFSCSGQGEAGRVPTCTLSSG-SCPAMCTCSNGIVDCRGKGLTAIPA 305
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN 180
LPE TE+RLE N I +PP AF+ Y++LRRIDLS NQI+++A DAFQGL+SL SL L
Sbjct: 306 NLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 365
Query: 181 NNNLTYLPDGVFA----------------------------------------------- 193
N +T LP GVF
Sbjct: 366 GNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTF 425
Query: 194 -ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I +F
Sbjct: 426 TSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANKRIGQIKSKKF 485
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CS + + + T+ + NS EC ++ CPH CRC +V+C
Sbjct: 486 RCS-----AKEQYFIP--GTEDYQLNS--------ECNSDVVCPHKCRCEANVVECSSLK 530
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPPKA 371
L K+P +P++T EL ++ + +L + + FK+ T+ + L N ++E+ A
Sbjct: 531 LTKIPERIPQSTAEL----RLNNNEISILEA--TGMFKKLTHLKKINLSNNKVSEIEDGA 584
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + + L N + + F LR +
Sbjct: 585 FEGAASVSELHLTANQLESIRSGMFRGLDGLRTL 618
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 149/294 (50%), Gaps = 55/294 (18%)
Query: 115 LNKVPILL---PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L+ +P LL +A + L L +N I +P KAF L+ + L KNQIS + AF+ L
Sbjct: 121 LHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRAL 180
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T
Sbjct: 181 RGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFT 240
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C P+ ++G N+ ++ + EF CSG R +C + +
Sbjct: 241 QCSGPASLRGLNVAEVQKSEFSCSGQGEAGRVP--------------TCTL--------S 278
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++GIVDCR KGL +P LPE TE+
Sbjct: 279 SGSCPAMCTCSNGIVDCRGKGLTAIPANLPETMTEI------------------------ 314
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLE N I +PP AF+ Y++LRRI L N I E+ P AF + L +
Sbjct: 315 ------RLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSL 362
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 188/451 (41%), Gaps = 91/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 411 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPR 470
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + EC ++ CPH CRC +V+C
Sbjct: 471 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVVCPHKCRCEANVVECSSLK 530
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L K+P +P++T ELRL N+I+ L F L++I+LS N++S++ AF+G
Sbjct: 531 LTKIPERIPQSTAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAAS 590
Query: 171 ---------------------LKSLTSLTLNN------------------------NNLT 185
L L +L L N N +T
Sbjct: 591 VSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIT 650
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+C L+WL WL++ + +C P ++ +
Sbjct: 651 TVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWLRKRKIVTGNPRCQNPDFLRQIPLQ 710
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E G C P CP C C D +
Sbjct: 711 DVAFPDFRCEEGQEE--------------------------GGCLPRPQCPQECACLDTV 744
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L +P +P+ TEL +D L+ +S FK + L N I+
Sbjct: 745 VRCSNKHLRALPKGIPKNVTELY----LDGNQFTLVPGQLS-TFKYL--QLVDLSNNKIS 797
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L +F N +L + L N + +PP AF
Sbjct: 798 SLSNSSFTNMSQLTTLILSYNALQCIPPLAF 828
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 135/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 643 SLYDNQITTVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWLRKRKIVTGNPRCQNPD 702
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ G C P CP C C D +V C K L +P +P
Sbjct: 703 FLRQIPLQDVAFPDFRCEEGQEE--GGCLPRPQCPQECACLDTVVRCSNKHLRALPKGIP 760
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN--- 180
+ TEL L+ N T L P + +K L+ +DLS N+IS ++ +F + LT+L L+
Sbjct: 761 KNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 819
Query: 181 ---------------------NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
N+++ L +G+FA++ L L I N CDCHL WL
Sbjct: 820 LQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSS 879
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 880 WVKTGYKEPGIARCAGPQDMEGKLLLTTPAKKFECQG 916
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 57/113 (50%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDC GL +P +P T L L N+IT + FA K+LR + L
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQL 92
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+NQI V AF +K L L LN N L LP+ +F L L +SEN+
Sbjct: 93 MENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAI 145
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C VDC GL +P +P T L + I R+ K N+F
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHK--------NDFAGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I + AF + K L R+RL +N + LP F N + L R+
Sbjct: 85 KQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRL 138
>gi|148921567|gb|AAI46762.1| Slit homolog 1 (Drosophila) [Homo sapiens]
gi|168267594|dbj|BAG09853.1| slit homolog 1 protein precursor [synthetic construct]
Length = 1534
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 153/454 (33%), Positives = 231/454 (50%), Gaps = 74/454 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 187 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEK---PTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
++G N+ ++ + EF CSG E PT ++ SCP C C++GIVDCR KGL +P
Sbjct: 247 SLRGLNVAEVQKSEFSCSGQGEAGRVPTCTLSSG-SCPAMCTCSNGIVDCRGKGLTAIPA 305
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN 180
LPE TE+RLE N I +PP AF+ Y++LRRIDLS NQI+++A DAFQGL+SL SL L
Sbjct: 306 NLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 365
Query: 181 NNNLTYLPDGVFA----------------------------------------------- 193
N +T LP GVF
Sbjct: 366 GNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTF 425
Query: 194 -ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I +F
Sbjct: 426 TSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANKRIGQIKSKKF 485
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CS + + + T+ + NS EC ++ CPH CRC +V+C
Sbjct: 486 RCS-----AKEQYFIP--GTEDYQLNS--------ECNSDVVCPHKCRCEANVVECSSLK 530
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPPKA 371
L K+P +P++T EL ++ + +L + + FK+ T+ + L N ++E+ A
Sbjct: 531 LTKIPERIPQSTAEL----RLNNNEISILEA--TGMFKKLTHLKKINLSNNKVSEIEDGA 584
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + + L N + + F LR +
Sbjct: 585 FEGAASVSELHLTANQLESIRSGMFRGLDGLRTL 618
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 149/294 (50%), Gaps = 55/294 (18%)
Query: 115 LNKVPILL---PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L+ +P LL +A + L L +N I +P KAF L+ + L KNQIS + AF+ L
Sbjct: 121 LHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRAL 180
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T
Sbjct: 181 RGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFT 240
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C P+ ++G N+ ++ + EF CSG R +C + +
Sbjct: 241 QCSGPASLRGLNVAEVQKSEFSCSGQGEAGRVP--------------TCTL--------S 278
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++GIVDCR KGL +P LPE TE+
Sbjct: 279 SGSCPAMCTCSNGIVDCRGKGLTAIPANLPETMTEI------------------------ 314
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLE N I +PP AF+ Y++LRRI L N I E+ P AF + L +
Sbjct: 315 ------RLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSL 362
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 188/451 (41%), Gaps = 91/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 411 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPR 470
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + EC ++ CPH CRC +V+C
Sbjct: 471 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVVCPHKCRCEANVVECSSLK 530
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L K+P +P++T ELRL N+I+ L F L++I+LS N++S++ AF+G
Sbjct: 531 LTKIPERIPQSTAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAAS 590
Query: 171 ---------------------LKSLTSLTLNN------------------------NNLT 185
L L +L L N N +T
Sbjct: 591 VSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIT 650
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+C L+WL WL++ + +C P ++ +
Sbjct: 651 TVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWLRKRKIVTGNPRCQNPDFLRQIPLQ 710
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E G C P CP C C D +
Sbjct: 711 DVAFPDFRCEEGQEE--------------------------GGCLPRPQCPQECACLDTV 744
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L +P +P+ TEL +D L+ +S FK + L N I+
Sbjct: 745 VRCSNKHLRALPKGIPKNVTELY----LDGNQFTLVPGQLS-TFKYL--QLVDLSNNKIS 797
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L +F N +L + L N + +PP AF
Sbjct: 798 SLSNSSFTNMSQLTTLILSYNALQCIPPLAF 828
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 135/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 643 SLYDNQITTVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWLRKRKIVTGNPRCQNPD 702
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ G C P CP C C D +V C K L +P +P
Sbjct: 703 FLRQIPLQDVAFPDFRCEEGQEE--GGCLPRPQCPQECACLDTVVRCSNKHLRALPKGIP 760
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN--- 180
+ TEL L+ N T L P + +K L+ +DLS N+IS ++ +F + LT+L L+
Sbjct: 761 KNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 819
Query: 181 ---------------------NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
N+++ L +G+FA++ L L I N CDCHL WL
Sbjct: 820 LQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSS 879
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 880 WVKTGYKEPGIARCAGPQDMEGKLLLTTPAKKFECQG 916
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 57/113 (50%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDC GL +P +P T L L N+IT + FA K+LR + L
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQL 92
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+NQI V AF +K L L LN N L LP+ +F L L +SEN+
Sbjct: 93 MENQIGVVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAI 145
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C VDC GL +P +P T L + I R+ K N+F
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHK--------NDFAGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I + AF + K L R+RL +N + LP F N + L R+
Sbjct: 85 KQLRVLQLMENQIGVVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRL 138
>gi|4049585|dbj|BAA35184.1| Slit-1 protein [Homo sapiens]
Length = 1534
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 153/454 (33%), Positives = 231/454 (50%), Gaps = 74/454 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 187 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEK---PTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
++G N+ ++ + EF CSG E PT ++ SCP C C++GIVDCR KGL +P
Sbjct: 247 SLRGLNVAEVQKSEFSCSGQGEAGRVPTCTLSSG-SCPAMCTCSNGIVDCRGKGLTAIPA 305
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN 180
LPE TE+RLE N I +PP AF+ Y++LRRIDLS NQI+++A DAFQGL+SL SL L
Sbjct: 306 NLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 365
Query: 181 NNNLTYLPDGVFA----------------------------------------------- 193
N +T LP GVF
Sbjct: 366 GNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTF 425
Query: 194 -ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I +F
Sbjct: 426 TSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANKRIGQIKSKKF 485
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CS + + + T+ + NS EC ++ CPH CRC +V+C
Sbjct: 486 RCS-----AKEQYFIP--GTEDYQLNS--------ECNSDVVCPHKCRCEANVVECSSLK 530
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPPKA 371
L K+P +P++T EL ++ + +L + + FK+ T+ + L N ++E+ A
Sbjct: 531 LTKIPERIPQSTAEL----RLNNNEISILEA--TGMFKKLTHLKKINLSNNKVSEIEDGA 584
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + + L N + + F LR +
Sbjct: 585 FEGAASVSELHLTANQLESIRSGMFRGLDGLRTL 618
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 149/294 (50%), Gaps = 55/294 (18%)
Query: 115 LNKVPILL---PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L+ +P LL +A + L L +N I +P KAF L+ + L KNQIS + AF+ L
Sbjct: 121 LHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLRLDKNQISCIEEGAFRAL 180
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T
Sbjct: 181 RGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFT 240
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C P+ ++G N+ ++ + EF CSG R +C + +
Sbjct: 241 QCSGPASLRGLNVAEVQKSEFSCSGQGEAGRVP--------------TCTL--------S 278
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++GIVDCR KGL +P LPE TE+
Sbjct: 279 SGSCPAMCTCSNGIVDCRGKGLTAIPANLPETMTEI------------------------ 314
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLE N I +PP AF+ Y++LRRI L N I E+ P AF + L +
Sbjct: 315 ------RLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSL 362
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 188/451 (41%), Gaps = 91/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 411 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPR 470
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + EC ++ CPH CRC +V+C
Sbjct: 471 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVVCPHKCRCEANVVECSSLK 530
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L K+P +P++T ELRL N+I+ L F L++I+LS N++S++ AF+G
Sbjct: 531 LTKIPERIPQSTAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAAS 590
Query: 171 ---------------------LKSLTSLTLNN------------------------NNLT 185
L L +L L N N +T
Sbjct: 591 VSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIT 650
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+C L+WL WL++ + +C P ++ +
Sbjct: 651 TVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWLRKRKIVTGNPRCQNPDFLRQIPLQ 710
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E G C P CP C C D +
Sbjct: 711 DVAFPDFRCEEGQEE--------------------------GGCLPRPQCPQECACLDTV 744
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L +P +P+ TEL +D L+ +S FK + L N I+
Sbjct: 745 VRCSNKHLRALPKGIPKNVTELY----LDGNQFTLVPGQLS-TFKYL--QLVDLSNNKIS 797
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L +F N +L + L N + +PP AF
Sbjct: 798 SLSNSSFTNMSQLTTLILSYNALQCIPPLAF 828
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 135/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 643 SLYDNQITTVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWLRKRKIVTGNPRCQNPD 702
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ G C P CP C C D +V C K L +P +P
Sbjct: 703 FLRQIPLQDVAFPDFRCEEGQEE--GGCLPRPQCPQECACLDTVVRCSNKHLRALPKGIP 760
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN--- 180
+ TEL L+ N T L P + +K L+ +DLS N+IS ++ +F + LT+L L+
Sbjct: 761 KNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 819
Query: 181 ---------------------NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
N+++ L +G+FA++ L L I N CDCHL WL
Sbjct: 820 LQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSS 879
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 880 WVKTGYKEPGIARCAGPQDMEGKLLLTTPAKKFECQG 916
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 57/113 (50%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDC GL +P +P T L L N+IT + FA K+LR + L
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQL 92
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+NQI V AF +K L L LN N L LP+ +F L L +SEN+
Sbjct: 93 MENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAI 145
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C VDC GL +P +P T L + I R+ K N+F
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHK--------NDFAGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I + AF + K L R+RL +N + LP F N + L R+
Sbjct: 85 KQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRL 138
>gi|402881090|ref|XP_003904113.1| PREDICTED: slit homolog 1 protein [Papio anubis]
Length = 1534
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 154/454 (33%), Positives = 229/454 (50%), Gaps = 74/454 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 187 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEK---PTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
++G N+ ++ + EF CSG E PT ++ SCP C C++GIVDCR KGL +P
Sbjct: 247 SLRGLNVAEVQKSEFSCSGQGEAGRVPTCTLSSG-SCPAMCTCSNGIVDCRGKGLTAIPA 305
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN 180
LPE TE+RLE N I +PP AF+ Y++LRRIDLS NQI+++A DAFQGL+SL SL L
Sbjct: 306 NLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 365
Query: 181 NNNLTYLPDGVFA----------------------------------------------- 193
N +T LP GVF
Sbjct: 366 GNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTF 425
Query: 194 -ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I +F
Sbjct: 426 TSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLSNKRIGQIKSKKF 485
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CS Y + D+ NS EC ++ CPH CRC +V+C
Sbjct: 486 RCSAKEQ------YFIPGTEDYQ-LNS--------ECNSDVICPHKCRCEASVVECSSLK 530
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPPKA 371
L K+P +P++T EL ++ + +L + + FK+ T+ + L N ++E+ A
Sbjct: 531 LTKIPERIPQSTAEL----RLNNNEISILEA--TGMFKKLTHLKKINLSNNKVSEIEDGA 584
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + + L N + + F LR +
Sbjct: 585 FEGAASVNELHLTANQLESIRSGMFRGLDGLRTL 618
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 143/282 (50%), Gaps = 52/282 (18%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+A + L L +N I +P KAF L+ + L KNQI+ + AF+ L+ L LTLNNNN
Sbjct: 133 QALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQINCIEEGAFRALRGLEVLTLNNNN 192
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+ ++G N
Sbjct: 193 ITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLN 252
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
+ ++ + EF CSG R +C + + SCP C C++
Sbjct: 253 VAEVQKSEFSCSGQGEAGRVP--------------TCTL--------SSGSCPAMCTCSN 290
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQND 363
GIVDCR KGL +P LPE TE+ RLE N
Sbjct: 291 GIVDCRGKGLTAIPANLPETMTEI------------------------------RLELNG 320
Query: 364 ITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I +PP AF+ Y++LRRI L N I E+ P AF + L +
Sbjct: 321 IKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSL 362
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 188/451 (41%), Gaps = 91/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 411 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPR 470
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + EC ++ CPH CRC +V+C
Sbjct: 471 RLSNKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVICPHKCRCEASVVECSSLK 530
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L K+P +P++T ELRL N+I+ L F L++I+LS N++S++ AF+G
Sbjct: 531 LTKIPERIPQSTAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAAS 590
Query: 171 ---------------------LKSLTSLTLNN------------------------NNLT 185
L L +L L N N +T
Sbjct: 591 VNELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIT 650
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+C L+WL WL++ + +C P ++ +
Sbjct: 651 TVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWLRKRKIVTGNPRCQNPDFLRQIPLQ 710
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E G C P CP C C D +
Sbjct: 711 DVAFPDFRCEEGQEE--------------------------GGCLPRPQCPQECACLDTV 744
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L +P +P+ TEL +D L+ +S FK + L N I+
Sbjct: 745 VRCSNKHLRALPKGIPKNVTELY----LDGNQFTLVPGQLS-TFKYL--QLVDLSNNKIS 797
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L +F N +L + L N + +PP AF
Sbjct: 798 SLSNSSFTNMSQLTTLILSYNALQCIPPLAF 828
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 135/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 643 SLYDNQITTVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWLRKRKIVTGNPRCQNPD 702
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ G C P CP C C D +V C K L +P +P
Sbjct: 703 FLRQIPLQDVAFPDFRCEEGQEE--GGCLPRPQCPQECACLDTVVRCSNKHLRALPKGIP 760
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN--- 180
+ TEL L+ N T L P + +K L+ +DLS N+IS ++ +F + LT+L L+
Sbjct: 761 KNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 819
Query: 181 ---------------------NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
N+++ L +G+FA++ L L I N CDCHL WL
Sbjct: 820 LQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSS 879
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 880 WVKTGYKEPGIARCAGPLDMEGKLLLTTPAKKFECQG 916
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 56/113 (49%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDC GL +P +P T L L N+IT + F K+LR + L
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFVGLKQLRVLQL 92
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+NQI V AF +K L L LN N L LP+ +F L L +SEN+
Sbjct: 93 MENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAI 145
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C VDC GL +P +P T L + I R+ K N+F
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHK--------NDFVGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I + AF + K L R+RL +N + LP F N + L R+
Sbjct: 85 KQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRL 138
>gi|345799084|ref|XP_003434521.1| PREDICTED: slit homolog 3 protein [Canis lupus familiaris]
Length = 1481
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 156/451 (34%), Positives = 220/451 (48%), Gaps = 76/451 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 146 TLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFTLCMAPV 205
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ D+ + E+ C GP +P A SCP C C++ IVDCR KGL ++P LP
Sbjct: 206 HLRGFNVADVQKKEYVCPGPHSEPPSCNANSISCPSACTCSNNIVDCRGKGLTEIPANLP 265
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N
Sbjct: 266 EGIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 325
Query: 184 LTYLP------------------------------------------------DGVFAEL 195
+T L G+FA L
Sbjct: 326 ITELAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPL 385
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N F+CDCHL WL +L+ P +C +P + + I I +F+CS
Sbjct: 386 QAIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRIGQIKSKKFRCS 445
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
GS + RS+ + EC + CP CRC IVDC + L +
Sbjct: 446 GSE-DYRSRF--------------------SSECFMDLVCPEKCRCEGTIVDCSNQKLAR 484
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P LPE T+L D VL + I FK+ N R L N I E+ AF
Sbjct: 485 IPSHLPEYVTDLRLN---DNEISVLEATGI---FKKLPNLRKINLSNNKIKEVREGAFDG 538
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ + L N + + + F L+ +
Sbjct: 539 AASVQELMLTGNQLETVHGRMFRGLSSLKTL 569
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/471 (27%), Positives = 205/471 (43%), Gaps = 96/471 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 368 SLYDNKLQTISKGLFAPLQAIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 427
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + + + EC + CP CRC IVDC + L ++P
Sbjct: 428 RLANKRIGQIKSKKFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLARIPS 487
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVDA--------- 167
LPE T+LRL N+I+ L F LR+I+LS N+I +V A D
Sbjct: 488 HLPEYVTDLRLNDNEISVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELML 547
Query: 168 ------------FQGLKSLTS------------------------LTLNNNNLTYLPDGV 191
F+GL SL + L+L +N +T + G
Sbjct: 548 TGNQLETVHGRMFRGLSSLKTLMLRSNLITCVSNDTFAGLSSVRLLSLYDNRITTITPGA 607
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L T+ + N F C+CHL+WL +WL++ + +C P +K I D+ +
Sbjct: 608 FTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 667
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ + C P CP C C + +V C +
Sbjct: 668 FTCEGNDESS---------------------------CQLGPRCPEQCTCLETVVRCSNR 700
Query: 312 GLNKVPILLPEATTEL----TYMVSIDRVDKVL----LYSYISNNFKRWTNRSRR----- 358
GL+ +P +P+ TEL ++ ++ R L L +N+ TN +
Sbjct: 701 GLHTLPKGIPKDVTELYLEGNHLTAVPRELSALRHLTLIDLSNNSIGVLTNYTFSNMSHL 760
Query: 359 ----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P AF + LR + L NDI+ +P +F++ L +
Sbjct: 761 STLILSYNRLRCIPIHAFDGLRSLRVLTLHGNDISSVPEGSFSDLTSLSHL 811
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 142/294 (48%), Gaps = 57/294 (19%)
Query: 115 LNKVPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL ++T T L L +N I +P KAF ++ + L N I+ + AF+ L
Sbjct: 80 LQVLPELLFQSTPKLTRLDLSENQILGIPRKAFRGITNVKNLQLDNNHINCIEDGAFRAL 139
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T
Sbjct: 140 RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFT 199
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
C AP H++G N+ D+ + E+ C G P +P A
Sbjct: 200 LCMAPVHLRGFNVADVQKKEYVCPG------------------------PHSEPPSCNAN 235
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++ IVDCR KGL ++P LPE E+
Sbjct: 236 SISCPSACTCSNNIVDCRGKGLTEIPANLPEGIVEI------------------------ 271
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF YK+L+RI + +N I+++ P AF K L +
Sbjct: 272 ------RLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 319
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 136/276 (49%), Gaps = 26/276 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CHL+WL +WL++ + +C P
Sbjct: 594 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPF 653
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C + +V C +GL+ +P +P
Sbjct: 654 FLKEIPIQDVAIQDFTCEGNDES---SCQLGPRCPEQCTCLETVVRCSNRGLHTLPKGIP 710
Query: 124 EATTELRLEQNDITELPPK-----------------------AFANYKRLRRIDLSKNQI 160
+ TEL LE N +T +P + F+N L + LS N++
Sbjct: 711 KDVTELYLEGNHLTAVPRELSALRHLTLIDLSNNSIGVLTNYTFSNMSHLSTLILSYNRL 770
Query: 161 SKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW 220
+ + AF GL+SL LTL+ N+++ +P+G F++L L L + N CDC L WL W
Sbjct: 771 RCIPIHAFDGLRSLRVLTLHGNDISSVPEGSFSDLTSLSHLALGTNPLHCDCSLRWLSEW 830
Query: 221 LKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
+K + +C +P + + +L P H F+C G
Sbjct: 831 VKAGYKEPGIARCSSPEPMADRLLLTTPTHRFQCKG 866
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 51/102 (50%)
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
VD ++ I L + L++N+IT + FA K LR + L NQ+S + A
Sbjct: 4 VDHKDNKYENAVIFLAGGVSRSDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGA 63
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFI 209
FQ LK L L LN N L LP+ +F +L L +SEN +
Sbjct: 64 FQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIL 105
>gi|332212438|ref|XP_003255326.1| PREDICTED: slit homolog 1 protein isoform 1 [Nomascus leucogenys]
Length = 1534
Score = 257 bits (656), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 154/454 (33%), Positives = 231/454 (50%), Gaps = 74/454 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 187 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEK---PTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
++G N+ +I + EF CSG E PT ++ SCP C C++GIVDCR KGL +P
Sbjct: 247 SLRGLNVAEIQKSEFSCSGQGEAGRVPTCTLSSG-SCPAMCTCSNGIVDCRGKGLTAIPA 305
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN 180
LPE TE+RLE N I +PP AF+ Y++LRRIDLS NQI+++A DAFQGL+SL SL L
Sbjct: 306 NLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 365
Query: 181 NNNLTYLPDGVFA----------------------------------------------- 193
N +T LP GVF
Sbjct: 366 GNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTF 425
Query: 194 -ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I +F
Sbjct: 426 TSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANKRIGQIRSKKF 485
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CS + + + T+ + NS EC ++ CPH CRC +V+C
Sbjct: 486 RCS-----AKEQYFIP--GTEDYQLNS--------ECNSDVVCPHKCRCEASVVECSSLK 530
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPPKA 371
L K+P +P++T EL ++ + +L + + FK+ T+ + L N ++E+ A
Sbjct: 531 LTKIPERIPQSTAEL----RLNNNEISILEA--TGMFKKLTHLKKINLSNNKVSEIEDGA 584
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + + L N + + F LR +
Sbjct: 585 FEGAASVSELHLTANQLESIRSGMFRGLDGLRTL 618
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/294 (36%), Positives = 149/294 (50%), Gaps = 55/294 (18%)
Query: 115 LNKVPILL---PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L+ +P LL +A + L L +N I +P KAF L+ + L KNQIS + AF+ L
Sbjct: 121 LHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRAL 180
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T
Sbjct: 181 RGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFT 240
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C P+ ++G N+ +I + EF CSG R +C + +
Sbjct: 241 QCSGPASLRGLNVAEIQKSEFSCSGQGEAGRVP--------------TCTL--------S 278
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++GIVDCR KGL +P LPE TE+
Sbjct: 279 SGSCPAMCTCSNGIVDCRGKGLTAIPANLPETMTEI------------------------ 314
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLE N I +PP AF+ Y++LRRI L N I E+ P AF + L +
Sbjct: 315 ------RLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSL 362
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 128/477 (26%), Positives = 195/477 (40%), Gaps = 101/477 (21%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 411 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPR 470
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + EC ++ CPH CRC +V+C
Sbjct: 471 RLANKRIGQIRSKKFRCSAKEQYFIPGTEDYQLNSECNSDVVCPHKCRCEASVVECSSLK 530
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L K+P +P++T ELRL N+I+ L F L++I+LS N++S++ AF+G
Sbjct: 531 LTKIPERIPQSTAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAAS 590
Query: 171 ---------------------LKSLTSLTLNN------------------------NNLT 185
L L +L L N N +T
Sbjct: 591 VSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIT 650
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+C L+WL WL++ + +C P ++ +
Sbjct: 651 TVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWLRKRKIVTGNPRCQNPDFLRQIPLQ 710
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E G C P CP C C D +
Sbjct: 711 DVAFPDFRCEEGQEE--------------------------GGCLPRPQCPQECACLDTV 744
Query: 306 VDCREKGLNKVPILLPEATTEL-------TYMVSIDRVDKVLLYSYISNN------FKRW 352
V C K L +P +P+ TEL T + K L +SNN +
Sbjct: 745 VRCSNKHLRALPKGIPKNVTELYLDGNQFTLVPGQLSTFKYLQLVDLSNNKISSLSNSSF 804
Query: 353 TNRSRR----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
TN S+ L N + +PP AF LR + L NDI+ L FA+ L +
Sbjct: 805 TNMSQLTTLILSYNALQCIPPLAFQGLCSLRLLSLHGNDISTLQEGIFADVTSLSHL 861
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 138/278 (49%), Gaps = 27/278 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 643 SLYDNQITTVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWLRKRKIVTGNPRCQNPD 702
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ G C P CP C C D +V C K L +P +P
Sbjct: 703 FLRQIPLQDVAFPDFRCEEGQEE--GGCLPRPQCPQECACLDTVVRCSNKHLRALPKGIP 760
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVD----------------- 166
+ TEL L+ N T L P + +K L+ +DLS N+IS ++
Sbjct: 761 KNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 819
Query: 167 -------AFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
AFQGL SL L+L+ N+++ L +G+FA++ L L I N CDCHL WL
Sbjct: 820 LQCIPPLAFQGLCSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSS 879
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGS 257
W+K + +C P ++G+ +L P +F+C GS
Sbjct: 880 WVKTGYKEPGIARCAGPPDMEGKLLLTTPAKKFECQGS 917
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 57/113 (50%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDC GL +P +P T L L N+IT + FA K+LR + L
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQL 92
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+NQI V AF +K L L LN N L LP+ +F L L +SEN+
Sbjct: 93 MENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAI 145
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C VDC GL +P +P T L + I R+ K N+F
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHK--------NDFAGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I + AF + K L R+RL +N + LP F N + L R+
Sbjct: 85 KQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRL 138
>gi|348587708|ref|XP_003479609.1| PREDICTED: slit homolog 1 protein-like [Cavia porcellus]
Length = 1534
Score = 257 bits (656), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 152/453 (33%), Positives = 231/453 (50%), Gaps = 72/453 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 187 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEKP-TGECA-AEPSCPHPCRCADGIVDCREKGLNKVPIL 121
++G N+ ++ + EF CSG E C + SCP C C++GIVDCR KGL +P
Sbjct: 247 SLRGLNVAEVQKSEFSCSGQGEAGRVPACTLSSGSCPAMCACSNGIVDCRGKGLTAIPAN 306
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
LPE TE+RLE N I +PP AF+ Y++LRRIDLS NQI+++A DAFQGL+SL SL L
Sbjct: 307 LPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEMAPDAFQGLRSLNSLVLYG 366
Query: 182 NNLTYLPDGVFA------------------------------------------------ 193
N +T LP GVF
Sbjct: 367 NKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFT 426
Query: 194 ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFK 253
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I +F+
Sbjct: 427 SLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANKRIGQIKSKKFR 486
Query: 254 CSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL 313
CS + + + T+ + NS EC+++ +CPH CRC +V+C L
Sbjct: 487 CS-----AKEQYFIP--GTEDYQLNS--------ECSSDVACPHKCRCEASMVECSSLKL 531
Query: 314 NKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPPKAF 372
+K+P +P++T EL ++ + LL + + FK+ T+ + L N ++E+ F
Sbjct: 532 SKIPERIPQSTAEL----RLNNNEISLLEA--TGMFKKLTHLKKINLSNNKVSEIEDGTF 585
Query: 373 ANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L N + + F LR +
Sbjct: 586 EGAASVSELHLTANQLESIRSGMFRGLDGLRTL 618
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 143/282 (50%), Gaps = 52/282 (18%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+A + L L +N + +P KAF L+ + L KNQIS + AF+ L+ L LTLNNNN
Sbjct: 133 QALSRLDLSENALQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNN 192
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+ ++G N
Sbjct: 193 ITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLN 252
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
+ ++ + EF CSG R +C + + SCP C C++
Sbjct: 253 VAEVQKSEFSCSGQGEAGRVP--------------ACTL--------SSGSCPAMCACSN 290
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQND 363
GIVDCR KGL +P LPE TE+ RLE N
Sbjct: 291 GIVDCRGKGLTAIPANLPETMTEI------------------------------RLELNG 320
Query: 364 ITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I +PP AF+ Y++LRRI L N I E+ P AF + L +
Sbjct: 321 IKSIPPGAFSPYRKLRRIDLSNNQIAEMAPDAFQGLRSLNSL 362
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 191/451 (42%), Gaps = 91/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 411 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPR 470
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + EC+++ +CPH CRC +V+C
Sbjct: 471 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECSSDVACPHKCRCEASMVECSSLK 530
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L+K+P +P++T ELRL N+I+ L F L++I+LS N++S++ F+G
Sbjct: 531 LSKIPERIPQSTAELRLNNNEISLLEATGMFKKLTHLKKINLSNNKVSEIEDGTFEGAAS 590
Query: 171 ---------------------LKSLTSLTLNN------------------------NNLT 185
L L +L L N N++T
Sbjct: 591 VSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHIT 650
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+C L+WL WL++ + +C P ++ +
Sbjct: 651 TISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQ 710
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E G C P CP C C D +
Sbjct: 711 DVAFPDFRCEEGQEE--------------------------GGCLPHPQCPQMCACLDTV 744
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L +P +P+ TEL +D L+ +S +K + L N I+
Sbjct: 745 VRCSNKHLRALPKGIPKNVTELY----LDGNQFTLVPGQLS-TYKYL--QLVDLSNNKIS 797
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L +F N +L + L N + +PP AF
Sbjct: 798 SLSNSSFTNMSQLTTLILSYNALQCIPPLAF 828
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 152/326 (46%), Gaps = 38/326 (11%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N++T + G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 643 SLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPD 702
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ G C P CP C C D +V C K L +P +P
Sbjct: 703 FLRQIPLQDVAFPDFRCEEGQEE--GGCLPHPQCPQMCACLDTVVRCSNKHLRALPKGIP 760
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TEL L+ N T L P + YK L+ +DLS N+IS ++ +F + LT+L L+ N
Sbjct: 761 KNVTELYLDGNQFT-LVPGQLSTYKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 819
Query: 184 LTYLP------------------------DGVFAELFRLRTLRISENSFICDCHLSWLHR 219
L +P +G+FA++ L L I N CDCHL WL
Sbjct: 820 LQCIPPLAFQGLHSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSN 879
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG-SSMETRSKIYREECSTDFHPYN 278
W+K + +C P ++G+ +L P +F+C G ++ ++K P
Sbjct: 880 WVKTGYKEPGIARCAGPPDMEGKLLLTTPAKKFECQGPPTLAVQTKC---------DPCL 930
Query: 279 SCPVEKPTGECAAEPSCPHPCRCADG 304
S P + G C +P + C C G
Sbjct: 931 SIPCQN-QGTCHNDPLVVYRCACPSG 955
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 58/113 (51%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDC GL VP +P +T L L N+IT + FA K+LR + L
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAVPKNIPRSTERLELNGNNITRIQKNDFAGLKQLRVLQL 92
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+NQI V AF +K L L LN N L LP+ +F L L +SEN+
Sbjct: 93 MENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAL 145
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNNFKRW 352
+CP C C VDC GL VP +P +T L +I R+ K N+F
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAVPKNIPRSTERLELNGNNITRIQK--------NDFAGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I + AF + K L R+RL +N + LP F N + L R+
Sbjct: 85 KQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRL 138
>gi|332834985|ref|XP_003312806.1| PREDICTED: slit homolog 1 protein [Pan troglodytes]
Length = 1672
Score = 257 bits (656), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 154/454 (33%), Positives = 229/454 (50%), Gaps = 74/454 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 349 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 408
Query: 64 HIKGQNILDIPEHEFKCSGPVEK---PTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
++G N+ ++ + EF CSG E PT ++ SCP C C++GIVDCR KGL +P
Sbjct: 409 SLRGLNVAEVQKSEFSCSGQGEAGRVPTCTLSSG-SCPAMCTCSNGIVDCRGKGLTAIPA 467
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN 180
LPE TE+RLE N I +PP AF+ Y++LRRIDLS NQI+++A DAFQGL+SL SL L
Sbjct: 468 NLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 527
Query: 181 NNNLTYLPDGVFA----------------------------------------------- 193
N +T LP GVF
Sbjct: 528 GNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTF 587
Query: 194 -ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I +F
Sbjct: 588 TSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANKRIGQIKSKKF 647
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CS Y + D+ NS EC ++ CPH CRC +V+C
Sbjct: 648 RCSAKEQ------YFIPGTEDYQ-LNS--------ECNSDVVCPHKCRCEANVVECSSLK 692
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPPKA 371
L K+P +P++T EL ++ + +L + + FK+ T+ + L N ++E+ A
Sbjct: 693 LTKIPERIPQSTAEL----RLNNNEISILEA--TGMFKKLTHLKKINLSNNKVSEIEDGA 746
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + + L N + + F LR +
Sbjct: 747 FEGAASVSELHLTANQLESIRSGMFRGLDGLRTL 780
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/282 (35%), Positives = 143/282 (50%), Gaps = 52/282 (18%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+A + L L +N I +P KAF L+ + L KNQIS + AF+ L+ L LTLNNNN
Sbjct: 295 QALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNN 354
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+ ++G N
Sbjct: 355 ITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLN 414
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
+ ++ + EF CSG R +C + + SCP C C++
Sbjct: 415 VAEVQKSEFSCSGQGEAGRVP--------------TCTL--------SSGSCPAMCTCSN 452
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQND 363
GIVDCR KGL +P LPE TE+ RLE N
Sbjct: 453 GIVDCRGKGLTAIPANLPETMTEI------------------------------RLELNG 482
Query: 364 ITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I +PP AF+ Y++LRRI L N I E+ P AF + L +
Sbjct: 483 IKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSL 524
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 192/460 (41%), Gaps = 91/460 (19%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 573 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPR 632
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + EC ++ CPH CRC +V+C
Sbjct: 633 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVVCPHKCRCEANVVECSSLK 692
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L K+P +P++T ELRL N+I+ L F L++I+LS N++S++ AF+G
Sbjct: 693 LTKIPERIPQSTAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAAS 752
Query: 171 ---------------------LKSLTSLTLNN------------------------NNLT 185
L L +L L N N +T
Sbjct: 753 VSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIT 812
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+C L+WL WL++ + +C P ++ +
Sbjct: 813 TVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWLRKRKIVTGNPRCQNPDFLRQIPLQ 872
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E G C P CP C C D +
Sbjct: 873 DVAFPDFRCEEGQEE--------------------------GGCLPRPQCPQECACLDTV 906
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L +P +P+ TEL +D L+ +S FK + L N +
Sbjct: 907 VRCSNKHLRALPKGIPKNVTELY----LDGNQFTLVPGQLS-TFKYL--QLVILSYNALQ 959
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+PP AF + LR + L NDI+ L FA+ L +
Sbjct: 960 CIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHL 999
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 134/253 (52%), Gaps = 3/253 (1%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 805 SLYDNQITTVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWLRKRKIVTGNPRCQNPD 864
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ G C P CP C C D +V C K L +P +P
Sbjct: 865 FLRQIPLQDVAFPDFRCEEGQEE--GGCLPRPQCPQECACLDTVVRCSNKHLRALPKGIP 922
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TEL L+ N T L P + +K L+ + LS N + + AFQGL+SL L+L+ N+
Sbjct: 923 KNVTELYLDGNQFT-LVPGQLSTFKYLQLVILSYNALQCIPPLAFQGLRSLRLLSLHGND 981
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
++ L +G+FA++ L L I N CDCHL WL W+K + +C P ++G+
Sbjct: 982 ISTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSSWVKTGYKEPGIARCAGPQDMEGKL 1041
Query: 244 ILDIPEHEFKCSG 256
+L P +F+C G
Sbjct: 1042 LLTTPAKKFECQG 1054
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 57/113 (50%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDC GL +P +P T L L N+IT + FA K+LR + L
Sbjct: 195 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQL 254
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+NQI V AF +K L L LN N L LP+ +F L L +SEN+
Sbjct: 255 MENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAI 307
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C VDC GL +P +P T L + I R+ K N+F
Sbjct: 195 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHK--------NDFAGL 246
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I + AF + K L R+RL +N + LP F N + L R+
Sbjct: 247 KQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRL 300
>gi|326923854|ref|XP_003208148.1| PREDICTED: slit homolog 1 protein-like [Meleagris gallopavo]
Length = 668
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 142/374 (37%), Positives = 203/374 (54%), Gaps = 65/374 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C AP+
Sbjct: 138 TLNNNNITSIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLAQWLRQRPTIGLFTQCAAPA 197
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGE-CA-AEPSCPHPCRCADGIVDCREKGLNKVPIL 121
++G N+ +I ++EF CSG + + C+ + SCP C C++GIVDCR KGL +P
Sbjct: 198 QLRGLNVAEIQKNEFSCSGQADGAHAQLCSLSSGSCPAMCTCSNGIVDCRGKGLTAIPAN 257
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
LPE TE+RLE N I +PP AF+ YK+LRRIDLS NQIS++A DAFQGL+SL SL L
Sbjct: 258 LPETMTEIRLELNGIKSIPPGAFSPYKKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYG 317
Query: 182 NNLTYLPDGVF--------------------AELFR------------------------ 197
N +T LP GVF A+ F+
Sbjct: 318 NKITDLPKGVFGGLFALQLLLLNANKINCVRADAFQDLQNLSLLSLYDNKIQSLAKGTFT 377
Query: 198 ----LRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFK 253
++TL +++N F+CDC+L WL +L+ P +C +P + + I I +F+
Sbjct: 378 SLRAIQTLHLAQNPFVCDCNLKWLADFLRANPIETSGARCASPRRLANKRIGQIKSKKFR 437
Query: 254 CSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL 313
CS Y + D+ NS EC ++ CP CRC G+V+C L
Sbjct: 438 CSAKEQ------YFIPGTEDYQ-LNS--------ECNSDVVCPPKCRCEAGVVECSNLKL 482
Query: 314 NKVPILLPEATTEL 327
K+P +P++T EL
Sbjct: 483 TKIPERIPQSTAEL 496
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 104/282 (36%), Positives = 148/282 (52%), Gaps = 52/282 (18%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+A + L L +N I +P KAF L+ + L KNQIS + AF+ L+ L LTLNNNN
Sbjct: 84 QALSRLDLSENFIQAIPRKAFRGATDLKNLQLDKNQISCIEDGAFRALRGLEVLTLNNNN 143
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C AP+ ++G N
Sbjct: 144 ITSIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLAQWLRQRPTIGLFTQCAAPAQLRGLN 203
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
+ +I ++EF CSG + +++ CS + SCP C C++
Sbjct: 204 VAEIQKNEFSCSGQADGAHAQL----CSL------------------SSGSCPAMCTCSN 241
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQND 363
GIVDCR KGL +P LPE TE+ RLE N
Sbjct: 242 GIVDCRGKGLTAIPANLPETMTEI------------------------------RLELNG 271
Query: 364 ITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I +PP AF+ YK+LRRI L N I+E+ P AF + L +
Sbjct: 272 IKSIPPGAFSPYKKLRRIDLSNNQISEIAPDAFQGLRSLNSL 313
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 158/409 (38%), Gaps = 115/409 (28%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N F+CDC+L WL +L+ P +C +P
Sbjct: 362 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFVCDCNLKWLADFLRANPIETSGARCASPR 421
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + EC ++ CP CRC G+V+C
Sbjct: 422 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVVCPPKCRCEAGVVECSNLK 481
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSL 174
L K+P +P++T E
Sbjct: 482 LTKIPERIPQSTAE---------------------------------------------- 495
Query: 175 TSLTLNNNNLTYL-PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKC 233
L LNNN ++ L G+F +L L+ + + N F C+C L+WL WL++ + +C
Sbjct: 496 --LRLNNNEISILEATGIFKKLPHLKKMNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRC 553
Query: 234 FAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEP 293
P ++ + D+ +F+C ET C P
Sbjct: 554 QHPDFLRQIPLQDVAFPDFRCEEGQEET--------------------------SCIPRP 587
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
CP C C D +V C K L +P +P+ TEL
Sbjct: 588 QCPQECTCLDTVVRCSNKHLKVLPRGIPKNVTELY------------------------- 622
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
L+ N T++P + + +K L+ + L N I+ L +F N +L
Sbjct: 623 -----LDGNQFTQVPGQ-LSTFKYLQLVDLSNNKISSLSNSSFTNMSQL 665
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 95/174 (54%), Gaps = 4/174 (2%)
Query: 5 LNNNNLTYL-PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
LNNN ++ L G+F +L L+ + + N F C+C L+WL WL++ + +C P
Sbjct: 498 LNNNEISILEATGIFKKLPHLKKMNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQHPD 557
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ + C P CP C C D +V C K L +P +P
Sbjct: 558 FLRQIPLQDVAFPDFRCEEGQEETS--CIPRPQCPQECTCLDTVVRCSNKHLKVLPRGIP 615
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSL 177
+ TEL L+ N T++P + + +K L+ +DLS N+IS ++ +F + LT+L
Sbjct: 616 KNVTELYLDGNQFTQVPGQ-LSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTL 668
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 41/76 (53%)
Query: 131 LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDG 190
L N+IT + F+ K+LR + L +NQIS V AF +K L L LN N L LP+
Sbjct: 19 LNGNNITRIHKNDFSGLKQLRVLQLMENQISVVERGAFDDMKELERLRLNRNQLHTLPEL 78
Query: 191 VFAELFRLRTLRISEN 206
+F L L +SEN
Sbjct: 79 LFQHNQALSRLDLSEN 94
>gi|297301586|ref|XP_001094231.2| PREDICTED: slit homolog 1 protein [Macaca mulatta]
Length = 1702
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 154/454 (33%), Positives = 229/454 (50%), Gaps = 74/454 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 362 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 421
Query: 64 HIKGQNILDIPEHEFKCSGPVEK---PTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
++G N+ ++ + EF CSG E PT ++ SCP C C++GIVDCR KGL +P
Sbjct: 422 SLRGLNVAEVQKSEFSCSGQGEAGRVPTCTLSSG-SCPAMCTCSNGIVDCRGKGLTAIPA 480
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN 180
LPE TE+RLE N I +PP AF+ Y++LRRIDLS NQI+++A DAFQGL+SL SL L
Sbjct: 481 NLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 540
Query: 181 NNNLTYLPDGVFA----------------------------------------------- 193
N +T LP GVF
Sbjct: 541 GNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTF 600
Query: 194 -ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I +F
Sbjct: 601 TSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLSNKRIGQIKSKKF 660
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CS Y + D+ NS EC ++ CPH CRC +V+C
Sbjct: 661 RCSAKEQ------YFIPGTEDYQ-LNS--------ECNSDVICPHKCRCEASVVECSSLK 705
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPPKA 371
L K+P +P++T EL ++ + +L + + FK+ T+ + L N ++E+ A
Sbjct: 706 LTKIPERIPQSTAEL----RLNNNEISILEA--TGMFKKLTHLKKINLSNNKVSEIEDGA 759
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + + L N + + F LR +
Sbjct: 760 FEGAASVSELHLTANQLESIRSGMFRGLDGLRTL 793
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 149/294 (50%), Gaps = 55/294 (18%)
Query: 115 LNKVPILL---PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L+ +P LL +A + L L +N I +P KAF L+ + L KNQI+ + AF+ L
Sbjct: 296 LHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQINCIEEGAFRAL 355
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T
Sbjct: 356 RGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFT 415
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C P+ ++G N+ ++ + EF CSG R +C + +
Sbjct: 416 QCSGPASLRGLNVAEVQKSEFSCSGQGEAGRVP--------------TCTL--------S 453
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++GIVDCR KGL +P LPE TE+
Sbjct: 454 SGSCPAMCTCSNGIVDCRGKGLTAIPANLPETMTEI------------------------ 489
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLE N I +PP AF+ Y++LRRI L N I E+ P AF + L +
Sbjct: 490 ------RLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSL 537
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 188/451 (41%), Gaps = 91/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 586 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPR 645
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + EC ++ CPH CRC +V+C
Sbjct: 646 RLSNKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVICPHKCRCEASVVECSSLK 705
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L K+P +P++T ELRL N+I+ L F L++I+LS N++S++ AF+G
Sbjct: 706 LTKIPERIPQSTAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAAS 765
Query: 171 ---------------------LKSLTSLTLNN------------------------NNLT 185
L L +L L N N +T
Sbjct: 766 VSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIT 825
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+C L+WL WL++ + +C P ++ +
Sbjct: 826 TVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWLRKRKIVTGNPRCQNPDFLRQIPLQ 885
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E G C P CP C C D +
Sbjct: 886 DVAFPDFRCEEGQEE--------------------------GGCLPRPQCPQECACLDTV 919
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L +P +P+ TEL +D L+ +S FK + L N I+
Sbjct: 920 VRCSNKHLRALPKGIPKNVTELY----LDGNQFTLVPGQLS-TFKYL--QLVDLSNNKIS 972
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L +F N +L + L N + +PP AF
Sbjct: 973 SLSNSSFTNMSQLTTLILSYNALQCIPPLAF 1003
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 135/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 818 SLYDNQITTVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWLRKRKIVTGNPRCQNPD 877
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ G C P CP C C D +V C K L +P +P
Sbjct: 878 FLRQIPLQDVAFPDFRCEEGQEE--GGCLPRPQCPQECACLDTVVRCSNKHLRALPKGIP 935
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN--- 180
+ TEL L+ N T L P + +K L+ +DLS N+IS ++ +F + LT+L L+
Sbjct: 936 KNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 994
Query: 181 ---------------------NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
N+++ L +G+FA++ L L I N CDCHL WL
Sbjct: 995 LQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSS 1054
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 1055 WVKTGYKEPGIARCAGPLDMEGKLLLTTPAKKFECQG 1091
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 56/113 (49%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDC GL +P +P T L L N+IT + F K+LR + L
Sbjct: 208 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFVGLKQLRVLQL 267
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+NQI V AF +K L L LN N L LP+ +F L L +SEN+
Sbjct: 268 MENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAI 320
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C VDC GL +P +P T L + I R+ K N+F
Sbjct: 208 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHK--------NDFVGL 259
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I + AF + K L R+RL +N + LP F N + L R+
Sbjct: 260 KQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRL 313
>gi|149052273|gb|EDM04090.1| slit homolog 3 (Drosophila) [Rattus norvegicus]
Length = 1445
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 156/451 (34%), Positives = 222/451 (49%), Gaps = 76/451 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 109 TLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFTLCMAPV 168
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G ++ D+ + E+ C GP + A SCP C C++ IVDCR KGL ++P LP
Sbjct: 169 HLRGFSVADVQKKEYVCPGPHSEAPACNANSLSCPSACSCSNNIVDCRGKGLTEIPANLP 228
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N
Sbjct: 229 EGIVEIRLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 288
Query: 184 LTYLP------------------------------------------------DGVFAEL 195
+T +P G+FA L
Sbjct: 289 ITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPL 348
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N F+CDCHL WL +L+ P +C +P + + I I +F+CS
Sbjct: 349 QSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCS 408
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
G S+ YR S+ EC + CP CRC IVDC + L++
Sbjct: 409 G------SEDYRNRFSS---------------ECFMDLVCPEKCRCEGTIVDCSNQKLSR 447
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P LPE TT+L D VL + I FK+ N R L N I E+ AF
Sbjct: 448 IPSHLPEYTTDLRLN---DNDISVLEATGI---FKKLPNLRKINLSNNRIKEVREGAFDG 501
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ + L N + + + F L+ +
Sbjct: 502 AAGVQELMLTGNQLETMHGRMFRGLSGLKTL 532
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 132/471 (28%), Positives = 209/471 (44%), Gaps = 96/471 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 331 SLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 390
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + + + EC + CP CRC IVDC + L+++P
Sbjct: 391 RLANKRISQIKSKKFRCSGSEDYRNRFSSECFMDLVCPEKCRCEGTIVDCSNQKLSRIPS 450
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVDA--------- 167
LPE TT+LRL NDI+ L F LR+I+LS N+I +V A D
Sbjct: 451 HLPEYTTDLRLNDNDISVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELML 510
Query: 168 ------------FQGLKSLTS------------------------LTLNNNNLTYLPDGV 191
F+GL L + L+L +N +T + G
Sbjct: 511 TGNQLETMHGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGA 570
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L T+ + N F C+CH++WL RWL++ + +C P +K I D+ +
Sbjct: 571 FTTLVSLSTINLLSNPFNCNCHMAWLGRWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 630
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ EE NSC + P CP C C + +V C +
Sbjct: 631 FTCEGN----------EE--------NSCQL---------SPRCPEQCTCVETVVRCSNR 663
Query: 312 GLNKVPILLPEATTEL----TYMVSIDR----VDKVLLYSYISNNFKRWTNRSRR----- 358
GL +P +P+ TEL ++ ++ + ++ L +N+ TN +
Sbjct: 664 GLRTLPKGMPKDVTELYLEGNHLTAVPKELSTFRQLTLIDLSNNSISMLTNHTFSNMSHL 723
Query: 359 ----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P AF + LR + L NDI+ +P +F + L +
Sbjct: 724 STLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHL 774
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 143/294 (48%), Gaps = 57/294 (19%)
Query: 115 LNKVPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL ++T T L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 43 LQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRAL 102
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T
Sbjct: 103 RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFT 162
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
C AP H++G ++ D+ + E+ C G P++ P A
Sbjct: 163 LCMAPVHLRGFSVADVQKKEYVCPG-------------------PHSEAPACN-----AN 198
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++ IVDCR KGL ++P LPE E+
Sbjct: 199 SLSCPSACSCSNNIVDCRGKGLTEIPANLPEGIVEI------------------------ 234
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF YK+L+RI + +N I+++ P AF K L +
Sbjct: 235 ------RLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 282
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 136/277 (49%), Gaps = 28/277 (10%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CH++WL RWL++ + +C P
Sbjct: 557 SLYDNRITTISPGAFTTLVSLSTINLLSNPFNCNCHMAWLGRWLRKRRIVSGNPRCQKPF 616
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C + +V C +GL +P +P
Sbjct: 617 FLKEIPIQDVAIQDFTCEGNEEN---SCQLSPRCPEQCTCVETVVRCSNRGLRTLPKGMP 673
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISK--------------------- 162
+ TEL LE N +T +P K + +++L IDLS N IS
Sbjct: 674 KDVTELYLEGNHLTAVP-KELSTFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNR 732
Query: 163 ---VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
+ V AF GL+SL LTL+ N+++ +P+G F +L L L + N CDC L WL
Sbjct: 733 LRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSE 792
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C +P + + +L P H F+C G
Sbjct: 793 WIKAGYKEPGIARCSSPESMADRLLLTTPTHRFQCKG 829
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TL+ N+++ +P+G F +L L L + N CDC L WL W+K + +C +P
Sbjct: 751 TLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWIKAGYKEPGIARCSSPE 810
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ + +L P H F+C GPV+
Sbjct: 811 SMADRLLLTTPTHRFQCKGPVD 832
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 34/65 (52%)
Query: 144 FANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRI 203
F K LR + L NQ+S + AFQ LK L L LN N L LP+ +F +L L +
Sbjct: 3 FTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDL 62
Query: 204 SENSF 208
SEN
Sbjct: 63 SENQI 67
>gi|426350923|ref|XP_004043012.1| PREDICTED: slit homolog 3 protein isoform 1 [Gorilla gorilla
gorilla]
Length = 1523
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 155/451 (34%), Positives = 220/451 (48%), Gaps = 76/451 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 187 TLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFTLCMAPV 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ D+ + E+ C P +P A SCP PC C++ IVDCR KGL ++P LP
Sbjct: 247 HLRGFNVADVQKKEYVCPAPHSEPPSCNANSISCPSPCTCSNNIVDCRGKGLMEIPANLP 306
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N
Sbjct: 307 EGIVEIRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 366
Query: 184 LT------------------------------------------------YLPDGVFAEL 195
+T + G+FA L
Sbjct: 367 ITEIAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPL 426
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N F+CDCHL WL +L+ P +C +P + + I I +F+CS
Sbjct: 427 QSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCS 486
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
GS + RS+ + EC + CP CRC IVDC + L +
Sbjct: 487 GSE-DYRSRF--------------------SSECFMDLVCPEKCRCEGTIVDCSNQKLAR 525
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P LPE T+L D VL + I FK+ N R L N I E+ AF
Sbjct: 526 IPSHLPEYVTDLRLN---DNEVSVLEATGI---FKKLPNLRKINLSNNKIKEVREGAFDG 579
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ + L N + + + F L+ +
Sbjct: 580 AASVQELMLTGNQLETVHGRVFRGLSGLKTL 610
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/471 (26%), Positives = 203/471 (43%), Gaps = 96/471 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 409 SLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 468
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + + + EC + CP CRC IVDC + L ++P
Sbjct: 469 RLANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLARIPS 528
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVDA--------- 167
LPE T+LRL N+++ L F LR+I+LS N+I +V A D
Sbjct: 529 HLPEYVTDLRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELML 588
Query: 168 ------------FQGLKSLTS------------------------LTLNNNNLTYLPDGV 191
F+GL L + L+L +N +T + G
Sbjct: 589 TGNQLETVHGRVFRGLSGLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGA 648
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L T+ + N F C+CHL+WL +WL++ + +C P +K I D+ +
Sbjct: 649 FTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 708
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ + C P CP C C + +V C K
Sbjct: 709 FTCDGNDESS---------------------------CQLSPRCPEQCTCMETVVRCSNK 741
Query: 312 GLNKVPILLPEATTEL----TYMVSIDR----VDKVLLYSYISNNFKRWTNRSRR----- 358
GL +P +P+ TEL ++ ++ R + + L +N+ TN +
Sbjct: 742 GLRALPKGMPKDVTELYLEGNHLTAVPRELSTLRHLTLIDLSNNSISMLTNYTFSNMSHL 801
Query: 359 ----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P AF + LR + L NDI+ +P +F + L +
Sbjct: 802 STLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHL 852
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 142/294 (48%), Gaps = 57/294 (19%)
Query: 115 LNKVPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL ++T T L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 121 LQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRAL 180
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T
Sbjct: 181 RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFT 240
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
C AP H++G N+ D+ + E+ C P +P A
Sbjct: 241 LCMAPVHLRGFNVADVQKKEYVCPA------------------------PHSEPPSCNAN 276
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP PC C++ IVDCR KGL ++P LPE E+
Sbjct: 277 SISCPSPCTCSNNIVDCRGKGLMEIPANLPEGIVEI------------------------ 312
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF YK+L+RI + +N I+++ P AF K L +
Sbjct: 313 ------RLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 360
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 134/277 (48%), Gaps = 28/277 (10%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CHL+WL +WL++ + +C P
Sbjct: 635 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPF 694
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C + +V C KGL +P +P
Sbjct: 695 FLKEIPIQDVAIQDFTCDGNDES---SCQLSPRCPEQCTCMETVVRCSNKGLRALPKGMP 751
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISK--------------------- 162
+ TEL LE N +T +P + + + L IDLS N IS
Sbjct: 752 KDVTELYLEGNHLTAVP-RELSTLRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNR 810
Query: 163 ---VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
+ V AF GL+SL LTL+ N+++ +P+G F +L L L + N CDC L WL
Sbjct: 811 LRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSE 870
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C +P + + +L P H F+C G
Sbjct: 871 WVKAGYKEPGIARCSSPEPMADRLLLTTPTHRFQCKG 907
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TL+ N+++ +P+G F +L L L + N CDC L WL W+K + +C +P
Sbjct: 829 TLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSSPE 888
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ + +L P H F+C GPV+
Sbjct: 889 PMADRLLLTTPTHRFQCKGPVD 910
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTY-MVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ VDC GL VP +P L +I R+ K+ +F
Sbjct: 33 ACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKM--------DFAGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R LE N ++ + AF + K+L R+RL +N + LP F + +L R+
Sbjct: 85 KNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRL 138
>gi|397479378|ref|XP_003810998.1| PREDICTED: slit homolog 3 protein [Pan paniscus]
Length = 1566
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 156/451 (34%), Positives = 220/451 (48%), Gaps = 76/451 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 230 TLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFTLCMAPV 289
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ D+ + E+ C P +P A SCP PC C++ IVDCR KGL ++P LP
Sbjct: 290 HLRGFNVADVQKKEYVCPAPHSEPPSCNANSISCPSPCTCSNNIVDCRGKGLMEIPANLP 349
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N
Sbjct: 350 EGIVEIRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 409
Query: 184 LT------------------------------------------------YLPDGVFAEL 195
+T + G+FA L
Sbjct: 410 ITEIAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPL 469
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N F+CDCHL WL +L+ P +C +P + + I I +F+CS
Sbjct: 470 QSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCS 529
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
G S+ YR S+ EC + CP CRC IVDC + L +
Sbjct: 530 G------SEDYRSRFSS---------------ECFMDLVCPEKCRCEGTIVDCSNQKLAR 568
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P LPE T+L D VL + I FK+ N R L N I E+ AF
Sbjct: 569 IPSHLPEYVTDLRLN---DNEVSVLEATGI---FKKLPNLRKINLSNNKIKEVREGAFDG 622
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ + L N + + + F L+ +
Sbjct: 623 AASVQELMLTGNQLETVHGRVFRGLSGLKTL 653
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 202/471 (42%), Gaps = 96/471 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 452 SLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 511
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + + + EC + CP CRC IVDC + L ++P
Sbjct: 512 RLANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLARIPS 571
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVDA--------- 167
LPE T+LRL N+++ L F LR+I+LS N+I +V A D
Sbjct: 572 HLPEYVTDLRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELML 631
Query: 168 ------------FQGLKSLTS------------------------LTLNNNNLTYLPDGV 191
F+GL L + L+L +N +T + G
Sbjct: 632 TGNQLETVHGRVFRGLSGLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGA 691
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L T+ + N F C+CHL+WL +WL++ + +C P +K I D+ +
Sbjct: 692 FTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 751
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ + C P CP C C + +V C K
Sbjct: 752 FTCDGNDESS---------------------------CQLSPRCPEQCTCMETVVRCSNK 784
Query: 312 GLNKVPILLPEATTEL----TYMVSIDRVDKVL----LYSYISNNFKRWTNRSRR----- 358
GL +P +P+ TEL ++ ++ R L L +N+ TN +
Sbjct: 785 GLRALPKGMPKDVTELYLEGNHLTAVPRELSALRHLTLIDLSNNSISMLTNYTFSNMSHL 844
Query: 359 ----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P AF + LR + L NDI+ +P +F + L +
Sbjct: 845 STLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHL 895
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 142/294 (48%), Gaps = 57/294 (19%)
Query: 115 LNKVPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL ++T T L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 164 LQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRAL 223
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T
Sbjct: 224 RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFT 283
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
C AP H++G N+ D+ + E+ C P +P A
Sbjct: 284 LCMAPVHLRGFNVADVQKKEYVCPA------------------------PHSEPPSCNAN 319
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP PC C++ IVDCR KGL ++P LPE E+
Sbjct: 320 SISCPSPCTCSNNIVDCRGKGLMEIPANLPEGIVEI------------------------ 355
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF YK+L+RI + +N I+++ P AF K L +
Sbjct: 356 ------RLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 403
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 134/277 (48%), Gaps = 28/277 (10%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CHL+WL +WL++ + +C P
Sbjct: 678 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPF 737
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C + +V C KGL +P +P
Sbjct: 738 FLKEIPIQDVAIQDFTCDGNDES---SCQLSPRCPEQCTCMETVVRCSNKGLRALPKGMP 794
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISK--------------------- 162
+ TEL LE N +T +P + + + L IDLS N IS
Sbjct: 795 KDVTELYLEGNHLTAVP-RELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNR 853
Query: 163 ---VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
+ V AF GL+SL LTL+ N+++ +P+G F +L L L + N CDC L WL
Sbjct: 854 LRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSE 913
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C +P + + +L P H F+C G
Sbjct: 914 WVKAGYKEPGIARCSSPEPMADRLLLTTPTHRFQCKG 950
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TL+ N+++ +P+G F +L L L + N CDC L WL W+K + +C +P
Sbjct: 872 TLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSSPE 931
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ + +L P H F+C GPV+
Sbjct: 932 PMADRLLLTTPTHRFQCKGPVD 953
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTY-MVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ VDC GL VP +P L +I R+ K+ +F
Sbjct: 76 ACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKM--------DFAGL 127
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R LE N ++ + AF + K+L R+RL +N + LP F + +L R+
Sbjct: 128 KNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRL 181
>gi|301766478|ref|XP_002918660.1| PREDICTED: slit homolog 3 protein-like [Ailuropoda melanoleuca]
Length = 1411
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 156/451 (34%), Positives = 220/451 (48%), Gaps = 76/451 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 76 TLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFTLCMAPV 135
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ D+ + E+ C GP +P A SCP C C++ IVDCR KGL ++P LP
Sbjct: 136 HLRGFNVADVQKKEYVCPGPHSEPPSCNANSISCPSACTCSNNIVDCRGKGLTEIPANLP 195
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N
Sbjct: 196 EGIIEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 255
Query: 184 LTYLP------------------------------------------------DGVFAEL 195
+T L G+FA L
Sbjct: 256 ITELAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLSLLSLYDNKLQTISKGLFAPL 315
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N F+CDCHL WL +L+ P +C +P + + I + +F+CS
Sbjct: 316 QAIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRIGQVKSKKFRCS 375
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
GS + RS+ + EC + CP CRC IVDC + L +
Sbjct: 376 GSE-DYRSRF--------------------SSECFMDLVCPERCRCEGTIVDCSNQKLAR 414
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P LPE T+L D VL + I FK+ N R L N I E+ AF
Sbjct: 415 IPSHLPEYVTDLRLN---DNEISVLEATGI---FKKLPNLRKINLSNNKIKEVREGAFDG 468
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ + L N + L + F L+ +
Sbjct: 469 AASVQELMLTGNQLETLHGRMFRGLSSLKTL 499
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 125/471 (26%), Positives = 204/471 (43%), Gaps = 96/471 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 298 SLYDNKLQTISKGLFAPLQAIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 357
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I + +F+CSG + + + EC + CP CRC IVDC + L ++P
Sbjct: 358 RLANKRIGQVKSKKFRCSGSEDYRSRFSSECFMDLVCPERCRCEGTIVDCSNQKLARIPS 417
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISK----------------- 162
LPE T+LRL N+I+ L F LR+I+LS N+I +
Sbjct: 418 HLPEYVTDLRLNDNEISVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELML 477
Query: 163 -------------------------------VAVDAFQGLKSLTSLTLNNNNLTYLPDGV 191
V+ D F GL S+ L+L +N +T + G
Sbjct: 478 TGNQLETLHGRMFRGLSSLKTLMLRSNLINCVSNDTFAGLSSVRLLSLYDNRITTITPGA 537
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L T+ + N F C+CHL+WL +WL++ + +C P +K I D+ +
Sbjct: 538 FTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRVVSGNPRCQKPFFLKEIPIQDVAIQD 597
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ + C P CP C C + +V C +
Sbjct: 598 FTCEGNDESS---------------------------CQLGPRCPEQCTCVETVVRCSNR 630
Query: 312 GLNKVPILLPEATTEL----TYMVSIDR----VDKVLLYSYISNNFKRWTNRSRR----- 358
GL+ +P +P+ TEL ++ ++ R + + L +N+ TN +
Sbjct: 631 GLHALPKGIPKDVTELYLEGNHLTAVPRELSTLRHLTLIDLSNNSIGVLTNYTFSNMSHL 690
Query: 359 ----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P AF + LR + L NDI+ +P +F++ L +
Sbjct: 691 STLILSYNRLRCIPVHAFDGLRSLRVLTLHGNDISSVPEGSFSDLTSLSHL 741
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 132/275 (48%), Gaps = 54/275 (19%)
Query: 131 LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDG 190
L +N I +P KAF ++ + L N IS + AF+ L+ L LTLNNNN++ +
Sbjct: 29 LSENQILGIPRKAFRGIANVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVT 88
Query: 191 VFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEH 250
F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP H++G N+ D+ +
Sbjct: 89 SFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFTLCMAPVHLRGFNVADVQKK 148
Query: 251 EFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCRE 310
E+ C G P +P A SCP C C++ IVDCR
Sbjct: 149 EYVCPG------------------------PHSEPPSCNANSISCPSACTCSNNIVDCRG 184
Query: 311 KGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPK 370
KGL ++P LPE E+ RLEQN I +P
Sbjct: 185 KGLTEIPANLPEGIIEI------------------------------RLEQNSIKSIPAG 214
Query: 371 AFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
AF YK+L+RI + +N I+++ P AF K L +
Sbjct: 215 AFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 249
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 136/276 (49%), Gaps = 26/276 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CHL+WL +WL++ + +C P
Sbjct: 524 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRVVSGNPRCQKPF 583
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C + +V C +GL+ +P +P
Sbjct: 584 FLKEIPIQDVAIQDFTCEGNDES---SCQLGPRCPEQCTCVETVVRCSNRGLHALPKGIP 640
Query: 124 EATTELRLEQNDITELPPK-----------------------AFANYKRLRRIDLSKNQI 160
+ TEL LE N +T +P + F+N L + LS N++
Sbjct: 641 KDVTELYLEGNHLTAVPRELSTLRHLTLIDLSNNSIGVLTNYTFSNMSHLSTLILSYNRL 700
Query: 161 SKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW 220
+ V AF GL+SL LTL+ N+++ +P+G F++L L L + N CDC L WL W
Sbjct: 701 RCIPVHAFDGLRSLRVLTLHGNDISSVPEGSFSDLTSLSHLALGTNPLHCDCGLRWLSEW 760
Query: 221 LKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
+K + +C +P + + +L P H F+C G
Sbjct: 761 VKAGYKEPGIARCSSPESMADRLLLTTPTHRFQCKG 796
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 15/118 (12%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TL+ N+++ +P+G F++L L L + N CDC L WL W+K + +C +P
Sbjct: 718 TLHGNDISSVPEGSFSDLTSLSHLALGTNPLHCDCGLRWLSEWVKAGYKEPGIARCSSPE 777
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------------KPTGECAAEPSCPHPCRCADG 106
+ + +L P H F+C GPV+ K G C+ +P + C C G
Sbjct: 778 SMADRLLLTTPTHRFQCKGPVDINIVAKCNGCVSSPCKNNGTCSQDPVELYRCTCPYG 835
>gi|410949268|ref|XP_003981345.1| PREDICTED: slit homolog 3 protein [Felis catus]
Length = 1459
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 154/451 (34%), Positives = 220/451 (48%), Gaps = 76/451 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 123 TLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFTLCMAPV 182
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ D+ + E+ C GP +P A SCP C C++ +VDCR KGL ++P LP
Sbjct: 183 HLRGFNVADVQKKEYICPGPHSEPPSCNANSISCPSACTCSNNVVDCRGKGLTEIPANLP 242
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N
Sbjct: 243 EGIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 302
Query: 184 LT------------------------------------------------YLPDGVFAEL 195
+T + G+FA L
Sbjct: 303 ITEIAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPL 362
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N F+CDCHL WL +L+ P +C +P + + I I +F+CS
Sbjct: 363 QAIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCS 422
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
GS + RS+ + EC + CP CRC IVDC + L +
Sbjct: 423 GSE-DYRSRF--------------------SSECFMDLVCPEKCRCEGTIVDCSNQKLAR 461
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P LPE T+L D VL + I FK+ N R L N I E+ AF
Sbjct: 462 IPSHLPEYVTDLRLN---DNDISVLEATGI---FKKLPNLRKINLSNNKIKEVREGAFDG 515
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ + L N + + + F L+ +
Sbjct: 516 AANVQELMLTGNQLETVHGRMFRGLSSLKTL 546
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 130/471 (27%), Positives = 206/471 (43%), Gaps = 96/471 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 345 SLYDNKLQTISKGLFAPLQAIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 404
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + + + EC + CP CRC IVDC + L ++P
Sbjct: 405 RLANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLARIPS 464
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVDA--------- 167
LPE T+LRL NDI+ L F LR+I+LS N+I +V A D
Sbjct: 465 HLPEYVTDLRLNDNDISVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAANVQELML 524
Query: 168 ------------FQGLKSLTS------------------------LTLNNNNLTYLPDGV 191
F+GL SL + L+L +N +T + G
Sbjct: 525 TGNQLETVHGRMFRGLSSLKTLMLRSNLINCVSNDTFAGLSSVRLLSLYDNRITTITPGA 584
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L T+ + N F C+CHL+WL +WL++ + +C P +K I D+ +
Sbjct: 585 FTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 644
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ + C P CP C C + +V C ++
Sbjct: 645 FTCEGNDESS---------------------------CQLGPLCPEQCTCVETVVRCSDR 677
Query: 312 GLNKVPILLPEATTEL----TYMVSIDRVDKVL----LYSYISNNFKRWTNRSRR----- 358
GL+ +P +P+ TEL ++ ++ R L L +N+ TN +
Sbjct: 678 GLHTLPRGIPKDVTELYLEGNHLTAVPRELSALPHLTLIDLSNNSIGVLTNYTFSNMSHL 737
Query: 359 ----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P AF + LR + L NDI+ +P +F++ L +
Sbjct: 738 STLILSYNRLRCIPIHAFNGLRSLRVLTLHGNDISSVPEGSFSDLTSLSHL 788
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 142/294 (48%), Gaps = 57/294 (19%)
Query: 115 LNKVPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL ++T T L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 57 LQVLPELLFQSTPKLTRLDLSENQILGIPRKAFRGITNVKNLQLDNNHISCIEDGAFRAL 116
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T
Sbjct: 117 RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFT 176
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
C AP H++G N+ D+ + E+ C G P +P A
Sbjct: 177 LCMAPVHLRGFNVADVQKKEYICPG------------------------PHSEPPSCNAN 212
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++ +VDCR KGL ++P LPE E+
Sbjct: 213 SISCPSACTCSNNVVDCRGKGLTEIPANLPEGIVEI------------------------ 248
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF YK+L+RI + +N I+++ P AF K L +
Sbjct: 249 ------RLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 296
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 137/276 (49%), Gaps = 26/276 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CHL+WL +WL++ + +C P
Sbjct: 571 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPF 630
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C + +V C ++GL+ +P +P
Sbjct: 631 FLKEIPIQDVAIQDFTCEGNDES---SCQLGPLCPEQCTCVETVVRCSDRGLHTLPRGIP 687
Query: 124 EATTELRLEQNDITELPPK-----------------------AFANYKRLRRIDLSKNQI 160
+ TEL LE N +T +P + F+N L + LS N++
Sbjct: 688 KDVTELYLEGNHLTAVPRELSALPHLTLIDLSNNSIGVLTNYTFSNMSHLSTLILSYNRL 747
Query: 161 SKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW 220
+ + AF GL+SL LTL+ N+++ +P+G F++L L L + N CDC L WL W
Sbjct: 748 RCIPIHAFNGLRSLRVLTLHGNDISSVPEGSFSDLTSLSHLALGTNPLHCDCSLRWLSEW 807
Query: 221 LKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
+K + +C +P + + +L P H F+C G
Sbjct: 808 VKAGYKEPGIARCSSPESMADRLLLTTPTHRFQCKG 843
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%)
Query: 131 LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDG 190
L++N+IT + FA K LR + L NQ+S + AFQ LK L L LN N L LP+
Sbjct: 4 LDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPEL 63
Query: 191 VFAELFRLRTLRISENSFI 209
+F +L L +SEN +
Sbjct: 64 LFQSTPKLTRLDLSENQIL 82
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 154 DLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
DL +N I+++ F GLK+L L L +N ++ + G F +L +L LR+++N
Sbjct: 3 DLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKL 57
>gi|13786142|ref|NP_112611.1| slit homolog 3 protein precursor [Rattus norvegicus]
gi|45477220|sp|O88280.1|SLIT3_RAT RecName: Full=Slit homolog 3 protein; Short=Slit-3; AltName:
Full=Multiple epidermal growth factor-like domains
protein 5; Short=Multiple EGF-like domains protein 5;
Flags: Precursor
gi|3449292|dbj|BAA32461.1| MEGF5 [Rattus norvegicus]
Length = 1523
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 154/451 (34%), Positives = 224/451 (49%), Gaps = 76/451 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 187 TLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFTLCMAPV 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G ++ D+ + E+ C GP + A SCP C C++ IVDCR KGL ++P LP
Sbjct: 247 HLRGFSVADVQKKEYVCPGPHSEAPACNANSLSCPSACSCSNNIVDCRGKGLTEIPANLP 306
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N
Sbjct: 307 EGIVEIRLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 366
Query: 184 LTYLP------------------------------------------------DGVFAEL 195
+T +P G+FA L
Sbjct: 367 ITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPL 426
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N F+CDCHL WL +L+ P +C +P + + I I +F+CS
Sbjct: 427 QSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCS 486
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
G S+ YR S+ EC + CP CRC IVDC + L++
Sbjct: 487 G------SEDYRNRFSS---------------ECFMDLVCPEKCRCEGTIVDCSNQKLSR 525
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P LPE TT+L ++ D +L + + FK+ N R L N I E+ AF
Sbjct: 526 IPSHLPEYTTDL----RLNDNDIAVLEA--TGIFKKLPNLRKINLSNNRIKEVREGAFDG 579
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ + L N + + + F L+ +
Sbjct: 580 AAGVQELMLTGNQLETMHGRMFRGLSGLKTL 610
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 132/471 (28%), Positives = 209/471 (44%), Gaps = 96/471 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 409 SLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 468
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + + + EC + CP CRC IVDC + L+++P
Sbjct: 469 RLANKRISQIKSKKFRCSGSEDYRNRFSSECFMDLVCPEKCRCEGTIVDCSNQKLSRIPS 528
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVDA--------- 167
LPE TT+LRL NDI L F LR+I+LS N+I +V A D
Sbjct: 529 HLPEYTTDLRLNDNDIAVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELML 588
Query: 168 ------------FQGLKSLTS------------------------LTLNNNNLTYLPDGV 191
F+GL L + L+L +N +T + G
Sbjct: 589 TGNQLETMHGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGA 648
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L T+ + N F C+CH++WL RWL++ + +C P +K I D+ +
Sbjct: 649 FTTLVSLSTINLLSNPFNCNCHMAWLGRWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 708
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ EE NSC + P CP C C + +V C +
Sbjct: 709 FTCEGN----------EE--------NSCQL---------SPRCPEQCTCVETVVRCSNR 741
Query: 312 GLNKVPILLPEATTEL----TYMVSIDR----VDKVLLYSYISNNFKRWTNRSRR----- 358
GL+ +P +P+ TEL ++ ++ + ++ L +N+ TN +
Sbjct: 742 GLHTLPKGMPKDVTELYLEGNHLTAVPKELSTFRQLTLIDLSNNSISMLTNHTFSNMSHL 801
Query: 359 ----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P AF + LR + L NDI+ +P +F + L +
Sbjct: 802 STLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHL 852
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 143/294 (48%), Gaps = 57/294 (19%)
Query: 115 LNKVPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL ++T T L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 121 LQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRAL 180
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T
Sbjct: 181 RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFT 240
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
C AP H++G ++ D+ + E+ C G P++ P A
Sbjct: 241 LCMAPVHLRGFSVADVQKKEYVCPG-------------------PHSEAPACN-----AN 276
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++ IVDCR KGL ++P LPE E+
Sbjct: 277 SLSCPSACSCSNNIVDCRGKGLTEIPANLPEGIVEI------------------------ 312
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF YK+L+RI + +N I+++ P AF K L +
Sbjct: 313 ------RLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 360
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 137/277 (49%), Gaps = 28/277 (10%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CH++WL RWL++ + +C P
Sbjct: 635 SLYDNRITTISPGAFTTLVSLSTINLLSNPFNCNCHMAWLGRWLRKRRIVSGNPRCQKPF 694
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C + +V C +GL+ +P +P
Sbjct: 695 FLKEIPIQDVAIQDFTCEGNEEN---SCQLSPRCPEQCTCVETVVRCSNRGLHTLPKGMP 751
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISK--------------------- 162
+ TEL LE N +T +P K + +++L IDLS N IS
Sbjct: 752 KDVTELYLEGNHLTAVP-KELSTFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNR 810
Query: 163 ---VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
+ V AF GL+SL LTL+ N+++ +P+G F +L L L + N CDC L WL
Sbjct: 811 LRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGINPLHCDCSLRWLSE 870
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C +P + + +L P H F+C G
Sbjct: 871 WIKAGYKEPGIARCSSPESMADRLLLTTPTHRFQCKG 907
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTY-MVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ VDC GL VP +P L +I R+ K+ +F
Sbjct: 33 ACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKM--------DFTGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R LE N ++ + AF + K+L R+RL +N + LP F + +L R+
Sbjct: 85 KNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRL 138
>gi|426350925|ref|XP_004043013.1| PREDICTED: slit homolog 3 protein isoform 2 [Gorilla gorilla
gorilla]
Length = 1524
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 156/452 (34%), Positives = 220/452 (48%), Gaps = 77/452 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 187 TLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFTLCMAPV 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEP-SCPHPCRCADGIVDCREKGLNKVPILL 122
H++G N+ D+ + E+ C GP C A SCP PC C++ IVDCR KGL ++P L
Sbjct: 247 HLRGFNVADVQKKEYVCPGPPHSEPPSCNANSISCPSPCTCSNNIVDCRGKGLMEIPANL 306
Query: 123 PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNN 182
PE E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N
Sbjct: 307 PEGIVEIRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGN 366
Query: 183 NLT------------------------------------------------YLPDGVFAE 194
+T + G+FA
Sbjct: 367 KITEIAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAP 426
Query: 195 LFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
L ++TL +++N F+CDCHL WL +L+ P +C +P + + I I +F+C
Sbjct: 427 LQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRC 486
Query: 255 SGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLN 314
SGS + RS+ + EC + CP CRC IVDC + L
Sbjct: 487 SGSE-DYRSRF--------------------SSECFMDLVCPEKCRCEGTIVDCSNQKLA 525
Query: 315 KVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFA 373
++P LPE T+L D VL + I FK+ N R L N I E+ AF
Sbjct: 526 RIPSHLPEYVTDLRLN---DNEVSVLEATGI---FKKLPNLRKINLSNNKIKEVREGAFD 579
Query: 374 NYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ + L N + + + F L+ +
Sbjct: 580 GAASVQELMLTGNQLETVHGRVFRGLSGLKTL 611
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 127/471 (26%), Positives = 203/471 (43%), Gaps = 96/471 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 410 SLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 469
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + + + EC + CP CRC IVDC + L ++P
Sbjct: 470 RLANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLARIPS 529
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVDA--------- 167
LPE T+LRL N+++ L F LR+I+LS N+I +V A D
Sbjct: 530 HLPEYVTDLRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELML 589
Query: 168 ------------FQGLKSLTS------------------------LTLNNNNLTYLPDGV 191
F+GL L + L+L +N +T + G
Sbjct: 590 TGNQLETVHGRVFRGLSGLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGA 649
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L T+ + N F C+CHL+WL +WL++ + +C P +K I D+ +
Sbjct: 650 FTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 709
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ + C P CP C C + +V C K
Sbjct: 710 FTCDGNDESS---------------------------CQLSPRCPEQCTCMETVVRCSNK 742
Query: 312 GLNKVPILLPEATTEL----TYMVSIDR----VDKVLLYSYISNNFKRWTNRSRR----- 358
GL +P +P+ TEL ++ ++ R + + L +N+ TN +
Sbjct: 743 GLRALPKGMPKDVTELYLEGNHLTAVPRELSTLRHLTLIDLSNNSISMLTNYTFSNMSHL 802
Query: 359 ----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P AF + LR + L NDI+ +P +F + L +
Sbjct: 803 STLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHL 853
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 143/294 (48%), Gaps = 56/294 (19%)
Query: 115 LNKVPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL ++T T L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 121 LQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRAL 180
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T
Sbjct: 181 RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFT 240
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
C AP H++G N+ D+ + E+ C G P +P A
Sbjct: 241 LCMAPVHLRGFNVADVQKKEYVCPGP-----------------------PHSEPPSCNAN 277
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP PC C++ IVDCR KGL ++P LPE E+
Sbjct: 278 SISCPSPCTCSNNIVDCRGKGLMEIPANLPEGIVEI------------------------ 313
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF YK+L+RI + +N I+++ P AF K L +
Sbjct: 314 ------RLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 361
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 134/277 (48%), Gaps = 28/277 (10%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CHL+WL +WL++ + +C P
Sbjct: 636 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPF 695
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C + +V C KGL +P +P
Sbjct: 696 FLKEIPIQDVAIQDFTCDGNDES---SCQLSPRCPEQCTCMETVVRCSNKGLRALPKGMP 752
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISK--------------------- 162
+ TEL LE N +T +P + + + L IDLS N IS
Sbjct: 753 KDVTELYLEGNHLTAVP-RELSTLRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNR 811
Query: 163 ---VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
+ V AF GL+SL LTL+ N+++ +P+G F +L L L + N CDC L WL
Sbjct: 812 LRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSE 871
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C +P + + +L P H F+C G
Sbjct: 872 WVKAGYKEPGIARCSSPEPMADRLLLTTPTHRFQCKG 908
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TL+ N+++ +P+G F +L L L + N CDC L WL W+K + +C +P
Sbjct: 830 TLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSSPE 889
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ + +L P H F+C GPV+
Sbjct: 890 PMADRLLLTTPTHRFQCKGPVD 911
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTY-MVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ VDC GL VP +P L +I R+ K+ +F
Sbjct: 33 ACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKM--------DFAGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R LE N ++ + AF + K+L R+RL +N + LP F + +L R+
Sbjct: 85 KNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRL 138
>gi|58801252|dbj|BAA32466.2| MEGF5 [Homo sapiens]
Length = 1559
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 155/451 (34%), Positives = 220/451 (48%), Gaps = 76/451 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 223 TLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFTLCMAPV 282
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ D+ + E+ C P +P A SCP PC C++ IVDCR KGL ++P LP
Sbjct: 283 HLRGFNVADVQKKEYVCPAPHSEPPSCNANSISCPSPCTCSNNIVDCRGKGLMEIPANLP 342
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N
Sbjct: 343 EGIVEIRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 402
Query: 184 LT------------------------------------------------YLPDGVFAEL 195
+T + G+FA L
Sbjct: 403 ITEIAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPL 462
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N F+CDCHL WL +L+ P +C +P + + I I +F+CS
Sbjct: 463 QSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCS 522
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
GS + RS+ + EC + CP CRC IVDC + L +
Sbjct: 523 GSE-DYRSRF--------------------SSECFMDLVCPEKCRCEGTIVDCSNQKLVR 561
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P LPE T+L D VL + I FK+ N R L N I E+ AF
Sbjct: 562 IPSHLPEYVTDLRLN---DNEVSVLEATGI---FKKLPNLRKINLSNNKIKEVREGAFDG 615
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ + L N + + + F L+ +
Sbjct: 616 AASVQELMLTGNQLETVHGRVFRGLSGLKTL 646
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 131/471 (27%), Positives = 204/471 (43%), Gaps = 96/471 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 445 SLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 504
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + + + EC + CP CRC IVDC + L ++P
Sbjct: 505 RLANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLVRIPS 564
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVDA--------- 167
LPE T+LRL N+++ L F LR+I+LS N+I +V A D
Sbjct: 565 HLPEYVTDLRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELML 624
Query: 168 ------------FQGLKSLTS------------------------LTLNNNNLTYLPDGV 191
F+GL L + L+L +N +T + G
Sbjct: 625 TGNQLETVHGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGA 684
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L T+ + N F C+CHL+WL +WL++ + +C P +K I D+ +
Sbjct: 685 FTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 744
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ EE S C P CP C C + +V C K
Sbjct: 745 FTCDGN----------EESS-----------------CQLSPRCPEQCTCMETVVRCSNK 777
Query: 312 GLNKVPILLPEATTEL----TYMVSIDRVDKVL----LYSYISNNFKRWTNRSRR----- 358
GL +P +P+ TEL ++ ++ R L L +N+ TN +
Sbjct: 778 GLRALPRGMPKDVTELYLEGNHLTAVPRELSALRHLTLIDLSNNSISMLTNYTFSNMSHL 837
Query: 359 ----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P AF + LR + L NDI+ +P +F + L +
Sbjct: 838 STLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHL 888
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 142/294 (48%), Gaps = 57/294 (19%)
Query: 115 LNKVPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL ++T T L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 157 LQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRAL 216
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T
Sbjct: 217 RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFT 276
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
C AP H++G N+ D+ + E+ C P +P A
Sbjct: 277 LCMAPVHLRGFNVADVQKKEYVCPA------------------------PHSEPPSCNAN 312
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP PC C++ IVDCR KGL ++P LPE E+
Sbjct: 313 SISCPSPCTCSNNIVDCRGKGLMEIPANLPEGIVEI------------------------ 348
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF YK+L+RI + +N I+++ P AF K L +
Sbjct: 349 ------RLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 396
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 134/277 (48%), Gaps = 28/277 (10%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CHL+WL +WL++ + +C P
Sbjct: 671 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPF 730
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C + +V C KGL +P +P
Sbjct: 731 FLKEIPIQDVAIQDFTCDGNEES---SCQLSPRCPEQCTCMETVVRCSNKGLRALPRGMP 787
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISK--------------------- 162
+ TEL LE N +T +P + + + L IDLS N IS
Sbjct: 788 KDVTELYLEGNHLTAVP-RELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNR 846
Query: 163 ---VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
+ V AF GL+SL LTL+ N+++ +P+G F +L L L + N CDC L WL
Sbjct: 847 LRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSE 906
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C +P + + +L P H F+C G
Sbjct: 907 WVKAGYKEPGIARCSSPEPMADRLLLTTPTHRFQCKG 943
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TL+ N+++ +P+G F +L L L + N CDC L WL W+K + +C +P
Sbjct: 865 TLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSSPE 924
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ + +L P H F+C GPV+
Sbjct: 925 PMADRLLLTTPTHRFQCKGPVD 946
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTY-MVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ VDC GL VP +P L +I R+ K+ +F
Sbjct: 69 ACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKM--------DFAGL 120
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R LE N ++ + AF + K+L R+RL +N + LP F + +L R+
Sbjct: 121 KNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRL 174
>gi|37182886|gb|AAQ89243.1| SLIT3 [Homo sapiens]
Length = 1523
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 155/451 (34%), Positives = 220/451 (48%), Gaps = 76/451 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 187 TLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFTLCMAPV 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ D+ + E+ C P +P A SCP PC C++ IVDCR KGL ++P LP
Sbjct: 247 HLRGFNVADVQKKEYVCPAPHSEPPSCNANSISCPSPCTCSNNIVDCRGKGLMEIPANLP 306
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N
Sbjct: 307 EGIVEIRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 366
Query: 184 LT------------------------------------------------YLPDGVFAEL 195
+T + G+FA L
Sbjct: 367 ITEIAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPL 426
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N F+CDCHL WL +L+ P +C +P + + I I +F+CS
Sbjct: 427 QSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCS 486
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
GS + RS+ + EC + CP CRC IVDC + L +
Sbjct: 487 GSE-DYRSRF--------------------SSECFMDLVCPEKCRCEGTIVDCSNQKLVR 525
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P LPE T+L D VL + I FK+ N R L N I E+ AF
Sbjct: 526 IPSHLPEYVTDLRLN---DNEVSVLEATGI---FKKLPNLRKINLSNNKIKEVREGAFDG 579
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ + L N + + + F L+ +
Sbjct: 580 AASVQELMLTGNQLETVHGRVFRGLSGLKTL 610
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 131/471 (27%), Positives = 204/471 (43%), Gaps = 96/471 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 409 SLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 468
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + + + EC + CP CRC IVDC + L ++P
Sbjct: 469 RLANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLVRIPS 528
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVDA--------- 167
LPE T+LRL N+++ L F LR+I+LS N+I +V A D
Sbjct: 529 HLPEYVTDLRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELML 588
Query: 168 ------------FQGLKSLTS------------------------LTLNNNNLTYLPDGV 191
F+GL L + L+L +N +T + G
Sbjct: 589 TGNQLETVHGRVFRGLSGLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGA 648
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L T+ + N F C+CHL+WL +WL++ + +C P +K I D+ +
Sbjct: 649 FTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 708
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ EE S C P CP C C + +V C K
Sbjct: 709 FTCDGN----------EESS-----------------CQLSPRCPEQCTCMETVVRCSNK 741
Query: 312 GLNKVPILLPEATTEL----TYMVSIDRVDKVL----LYSYISNNFKRWTNRSRR----- 358
GL +P +P+ TEL ++ ++ R L L +N+ TN +
Sbjct: 742 GLRALPRGMPKDVTELYLEGNHLTAVPRELSALRHLTLIDLSNNSISMLTNYTFSNMSHL 801
Query: 359 ----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P AF + LR + L NDI+ +P +F + L +
Sbjct: 802 STLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHL 852
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 142/294 (48%), Gaps = 57/294 (19%)
Query: 115 LNKVPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL ++T T L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 121 LQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRAL 180
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T
Sbjct: 181 RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFT 240
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
C AP H++G N+ D+ + E+ C P +P A
Sbjct: 241 LCMAPVHLRGFNVADVQKKEYVCPA------------------------PHSEPPSCNAN 276
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP PC C++ IVDCR KGL ++P LPE E+
Sbjct: 277 SISCPSPCTCSNNIVDCRGKGLMEIPANLPEGIVEI------------------------ 312
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF YK+L+RI + +N I+++ P AF K L +
Sbjct: 313 ------RLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 360
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 134/277 (48%), Gaps = 28/277 (10%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CHL+WL +WL++ + +C P
Sbjct: 635 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPF 694
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C + +V C KGL +P +P
Sbjct: 695 FLKEIPIQDVAIQDFTCDGNEES---SCQLSPRCPEQCTCMETVVRCSNKGLRALPRGMP 751
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISK--------------------- 162
+ TEL LE N +T +P + + + L IDLS N IS
Sbjct: 752 KDVTELYLEGNHLTAVP-RELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNR 810
Query: 163 ---VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
+ V AF GL+SL LTL+ N+++ +P+G F +L L L + N CDC L WL
Sbjct: 811 LRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSE 870
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C +P + + +L P H F+C G
Sbjct: 871 WVKAGYKEPGIARCSSPEPMADRLLLTTPTHRFQCKG 907
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TL+ N+++ +P+G F +L L L + N CDC L WL W+K + +C +P
Sbjct: 829 TLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSSPE 888
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ + +L P H F+C GPV+
Sbjct: 889 PMADRLLLTTPTHRFQCKGPVD 910
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTY-MVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ VDC GL VP +P L +I R+ K+ +F
Sbjct: 33 ACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKM--------DFAGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R LE N ++ + AF + K+L R+RL +N + LP F + +L R+
Sbjct: 85 KNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRL 138
>gi|429836873|ref|NP_001258875.1| slit homolog 3 protein isoform 1 precursor [Homo sapiens]
Length = 1530
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 155/451 (34%), Positives = 220/451 (48%), Gaps = 76/451 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 187 TLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFTLCMAPV 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ D+ + E+ C P +P A SCP PC C++ IVDCR KGL ++P LP
Sbjct: 247 HLRGFNVADVQKKEYVCPAPHSEPPSCNANSISCPSPCTCSNNIVDCRGKGLMEIPANLP 306
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N
Sbjct: 307 EGIVEIRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 366
Query: 184 LT------------------------------------------------YLPDGVFAEL 195
+T + G+FA L
Sbjct: 367 ITEIAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPL 426
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N F+CDCHL WL +L+ P +C +P + + I I +F+CS
Sbjct: 427 QSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCS 486
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
GS + RS+ + EC + CP CRC IVDC + L +
Sbjct: 487 GSE-DYRSRF--------------------SSECFMDLVCPEKCRCEGTIVDCSNQKLVR 525
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P LPE T+L D VL + I FK+ N R L N I E+ AF
Sbjct: 526 IPSHLPEYVTDLRLN---DNEVSVLEATGI---FKKLPNLRKINLSNNKIKEVREGAFDG 579
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ + L N + + + F L+ +
Sbjct: 580 AASVQELMLTGNQLETVHGRVFRGLSGLKTL 610
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 131/471 (27%), Positives = 204/471 (43%), Gaps = 96/471 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 409 SLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 468
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + + + EC + CP CRC IVDC + L ++P
Sbjct: 469 RLANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLVRIPS 528
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVDA--------- 167
LPE T+LRL N+++ L F LR+I+LS N+I +V A D
Sbjct: 529 HLPEYVTDLRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELML 588
Query: 168 ------------FQGLKSLTS------------------------LTLNNNNLTYLPDGV 191
F+GL L + L+L +N +T + G
Sbjct: 589 TGNQLETVHGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGA 648
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L T+ + N F C+CHL+WL +WL++ + +C P +K I D+ +
Sbjct: 649 FTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 708
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ EE S C P CP C C + +V C K
Sbjct: 709 FTCDGN----------EESS-----------------CQLSPRCPEQCTCMETVVRCSNK 741
Query: 312 GLNKVPILLPEATTEL----TYMVSIDRVDKVL----LYSYISNNFKRWTNRSRR----- 358
GL +P +P+ TEL ++ ++ R L L +N+ TN +
Sbjct: 742 GLRALPRGMPKDVTELYLEGNHLTAVPRELSALRHLTLIDLSNNSISMLTNYTFSNMSHL 801
Query: 359 ----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P AF + LR + L NDI+ +P +F + L +
Sbjct: 802 STLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHL 852
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 142/294 (48%), Gaps = 57/294 (19%)
Query: 115 LNKVPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL ++T T L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 121 LQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRAL 180
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T
Sbjct: 181 RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFT 240
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
C AP H++G N+ D+ + E+ C P +P A
Sbjct: 241 LCMAPVHLRGFNVADVQKKEYVCPA------------------------PHSEPPSCNAN 276
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP PC C++ IVDCR KGL ++P LPE E+
Sbjct: 277 SISCPSPCTCSNNIVDCRGKGLMEIPANLPEGIVEI------------------------ 312
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF YK+L+RI + +N I+++ P AF K L +
Sbjct: 313 ------RLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 360
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 133/275 (48%), Gaps = 28/275 (10%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CHL+WL +WL++ + +C P
Sbjct: 635 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPF 694
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C + +V C KGL +P +P
Sbjct: 695 FLKEIPIQDVAIQDFTCDGNEES---SCQLSPRCPEQCTCMETVVRCSNKGLRALPRGMP 751
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISK--------------------- 162
+ TEL LE N +T +P + + + L IDLS N IS
Sbjct: 752 KDVTELYLEGNHLTAVP-RELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNR 810
Query: 163 ---VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
+ V AF GL+SL LTL+ N+++ +P+G F +L L L + N CDC L WL
Sbjct: 811 LRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSE 870
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
W+K + +C +P + + +L P H F+C
Sbjct: 871 WVKAGYKEPGIARCSSPEPMADRLLLTTPTHRFQC 905
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTY-MVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ VDC GL VP +P L +I R+ K+ +F
Sbjct: 33 ACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKM--------DFAGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R LE N ++ + AF + K+L R+RL +N + LP F + +L R+
Sbjct: 85 KNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRL 138
>gi|441597463|ref|XP_004087384.1| PREDICTED: LOW QUALITY PROTEIN: slit homolog 3 protein [Nomascus
leucogenys]
Length = 1670
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 155/451 (34%), Positives = 220/451 (48%), Gaps = 76/451 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 365 TLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFTLCMAPV 424
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ D+ + E+ C P +P A SCP PC C++ IVDCR KGL ++P LP
Sbjct: 425 HLRGFNVADVQKKEYVCPAPDSEPPSCNANSISCPSPCTCSNNIVDCRGKGLTEIPANLP 484
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N
Sbjct: 485 EGIVEIRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 544
Query: 184 LT------------------------------------------------YLPDGVFAEL 195
+T + G+FA L
Sbjct: 545 ITEIAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPL 604
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N F+CDCHL WL +L+ P +C +P + + I I +F+CS
Sbjct: 605 QSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCS 664
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
G ++ YR S+ EC + CP CRC IVDC + L +
Sbjct: 665 G------TEDYRSRFSS---------------ECFMDLMCPEKCRCEGTIVDCSNQKLAR 703
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P LPE T+L D VL + I FK+ N R L N I E+ AF
Sbjct: 704 IPSHLPEYVTDLRLN---DNEISVLEATGI---FKKLPNLRKINLSNNKIKEVREGAFDG 757
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ + L N + + + F L+ +
Sbjct: 758 AASVQELMLTGNQLETVHGRMFRGLSGLKTL 788
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/471 (27%), Positives = 202/471 (42%), Gaps = 96/471 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 587 SLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 646
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + + + EC + CP CRC IVDC + L ++P
Sbjct: 647 RLANKRISQIKSKKFRCSGTEDYRSRFSSECFMDLMCPEKCRCEGTIVDCSNQKLARIPS 706
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVDA--------- 167
LPE T+LRL N+I+ L F LR+I+LS N+I +V A D
Sbjct: 707 HLPEYVTDLRLNDNEISVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELML 766
Query: 168 ------------FQGLKSLTS------------------------LTLNNNNLTYLPDGV 191
F+GL L + L+L +N +T + G
Sbjct: 767 TGNQLETVHGRMFRGLSGLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGA 826
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L T+ + N F C+CHL+WL +WL++ + +C P +K I D+ +
Sbjct: 827 FTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 886
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ + C P CP C C + +V C K
Sbjct: 887 FTCDGNDESS---------------------------CQLSPRCPEQCTCMETVVRCSNK 919
Query: 312 GLNKVPILLPEATTEL----TYMVSIDRVDKVL----LYSYISNNFKRWTNRSRR----- 358
GL +P +P+ TEL ++ ++ R L L +N+ TN +
Sbjct: 920 GLRALPRGMPKDVTELYLEGNHLTAVPRELSALRHLTLIDLSNNSISMLTNYTFSNMSHL 979
Query: 359 ----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P AF + LR + L NDI+ +P +F + L +
Sbjct: 980 STLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHL 1030
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 142/294 (48%), Gaps = 57/294 (19%)
Query: 115 LNKVPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL ++T T L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 299 LQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRAL 358
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T
Sbjct: 359 RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFT 418
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
C AP H++G N+ D+ + E+ C P +P A
Sbjct: 419 LCMAPVHLRGFNVADVQKKEYVCPA------------------------PDSEPPSCNAN 454
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP PC C++ IVDCR KGL ++P LPE E+
Sbjct: 455 SISCPSPCTCSNNIVDCRGKGLTEIPANLPEGIVEI------------------------ 490
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF YK+L+RI + +N I+++ P AF K L +
Sbjct: 491 ------RLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 538
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 134/277 (48%), Gaps = 28/277 (10%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CHL+WL +WL++ + +C P
Sbjct: 813 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPF 872
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C + +V C KGL +P +P
Sbjct: 873 FLKEIPIQDVAIQDFTCDGNDES---SCQLSPRCPEQCTCMETVVRCSNKGLRALPRGMP 929
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISK--------------------- 162
+ TEL LE N +T +P + + + L IDLS N IS
Sbjct: 930 KDVTELYLEGNHLTAVP-RELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNR 988
Query: 163 ---VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
+ V AF GL+SL LTL+ N+++ +P+G F +L L L + N CDC L WL
Sbjct: 989 LRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSE 1048
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C +P + + +L P H F+C G
Sbjct: 1049 WVKAGYKEPGIARCSSPEPMADRLLLTTPTHRFQCKG 1085
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TL+ N+++ +P+G F +L L L + N CDC L WL W+K + +C +P
Sbjct: 1007 TLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSSPE 1066
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ + +L P H F+C GPV+
Sbjct: 1067 PMADRLLLTTPTHRFQCKGPVD 1088
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ VDC GL VP +P L +D+ + +F
Sbjct: 211 ACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLD-------LDRNNITRITKTDFAGLK 263
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R LE N ++ + AF + K+L R+RL +N + LP F + +L R+
Sbjct: 264 NLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRL 316
>gi|11321571|ref|NP_003053.1| slit homolog 3 protein isoform 2 precursor [Homo sapiens]
gi|4049589|dbj|BAA35186.1| Slit-3 protein [Homo sapiens]
gi|148922178|gb|AAI46760.1| Slit homolog 3 (Drosophila) [Homo sapiens]
gi|168267596|dbj|BAG09854.1| slit homolog 3 protein precursor [synthetic construct]
Length = 1523
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 155/451 (34%), Positives = 220/451 (48%), Gaps = 76/451 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 187 TLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFTLCMAPV 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ D+ + E+ C P +P A SCP PC C++ IVDCR KGL ++P LP
Sbjct: 247 HLRGFNVADVQKKEYVCPAPHSEPPSCNANSISCPSPCTCSNNIVDCRGKGLMEIPANLP 306
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N
Sbjct: 307 EGIVEIRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 366
Query: 184 LT------------------------------------------------YLPDGVFAEL 195
+T + G+FA L
Sbjct: 367 ITEIAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPL 426
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N F+CDCHL WL +L+ P +C +P + + I I +F+CS
Sbjct: 427 QSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCS 486
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
GS + RS+ + EC + CP CRC IVDC + L +
Sbjct: 487 GSE-DYRSRF--------------------SSECFMDLVCPEKCRCEGTIVDCSNQKLVR 525
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P LPE T+L D VL + I FK+ N R L N I E+ AF
Sbjct: 526 IPSHLPEYVTDLRLN---DNEVSVLEATGI---FKKLPNLRKINLSNNKIKEVREGAFDG 579
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ + L N + + + F L+ +
Sbjct: 580 AASVQELMLTGNQLETVHGRVFRGLSGLKTL 610
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 131/471 (27%), Positives = 204/471 (43%), Gaps = 96/471 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 409 SLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 468
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + + + EC + CP CRC IVDC + L ++P
Sbjct: 469 RLANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLVRIPS 528
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVDA--------- 167
LPE T+LRL N+++ L F LR+I+LS N+I +V A D
Sbjct: 529 HLPEYVTDLRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELML 588
Query: 168 ------------FQGLKSLTS------------------------LTLNNNNLTYLPDGV 191
F+GL L + L+L +N +T + G
Sbjct: 589 TGNQLETVHGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGA 648
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L T+ + N F C+CHL+WL +WL++ + +C P +K I D+ +
Sbjct: 649 FTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 708
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ EE S C P CP C C + +V C K
Sbjct: 709 FTCDGN----------EESS-----------------CQLSPRCPEQCTCMETVVRCSNK 741
Query: 312 GLNKVPILLPEATTEL----TYMVSIDRVDKVL----LYSYISNNFKRWTNRSRR----- 358
GL +P +P+ TEL ++ ++ R L L +N+ TN +
Sbjct: 742 GLRALPRGMPKDVTELYLEGNHLTAVPRELSALRHLTLIDLSNNSISMLTNYTFSNMSHL 801
Query: 359 ----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P AF + LR + L NDI+ +P +F + L +
Sbjct: 802 STLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHL 852
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 142/294 (48%), Gaps = 57/294 (19%)
Query: 115 LNKVPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL ++T T L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 121 LQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRAL 180
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T
Sbjct: 181 RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFT 240
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
C AP H++G N+ D+ + E+ C P +P A
Sbjct: 241 LCMAPVHLRGFNVADVQKKEYVCPA------------------------PHSEPPSCNAN 276
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP PC C++ IVDCR KGL ++P LPE E+
Sbjct: 277 SISCPSPCTCSNNIVDCRGKGLMEIPANLPEGIVEI------------------------ 312
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF YK+L+RI + +N I+++ P AF K L +
Sbjct: 313 ------RLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 360
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 134/277 (48%), Gaps = 28/277 (10%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CHL+WL +WL++ + +C P
Sbjct: 635 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPF 694
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C + +V C KGL +P +P
Sbjct: 695 FLKEIPIQDVAIQDFTCDGNEES---SCQLSPRCPEQCTCMETVVRCSNKGLRALPRGMP 751
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISK--------------------- 162
+ TEL LE N +T +P + + + L IDLS N IS
Sbjct: 752 KDVTELYLEGNHLTAVP-RELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNR 810
Query: 163 ---VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
+ V AF GL+SL LTL+ N+++ +P+G F +L L L + N CDC L WL
Sbjct: 811 LRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSE 870
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C +P + + +L P H F+C G
Sbjct: 871 WVKAGYKEPGIARCSSPEPMADRLLLTTPTHRFQCKG 907
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TL+ N+++ +P+G F +L L L + N CDC L WL W+K + +C +P
Sbjct: 829 TLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSSPE 888
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ + +L P H F+C GPV+
Sbjct: 889 PMADRLLLTTPTHRFQCKGPVD 910
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTY-MVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ VDC GL VP +P L +I R+ K+ +F
Sbjct: 33 ACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKM--------DFAGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R LE N ++ + AF + K+L R+RL +N + LP F + +L R+
Sbjct: 85 KNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRL 138
>gi|311033528|sp|O75094.3|SLIT3_HUMAN RecName: Full=Slit homolog 3 protein; Short=Slit-3; AltName:
Full=Multiple epidermal growth factor-like domains
protein 5; Short=Multiple EGF-like domains protein 5;
Flags: Precursor
Length = 1523
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 155/451 (34%), Positives = 220/451 (48%), Gaps = 76/451 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 187 TLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFTLCMAPV 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ D+ + E+ C P +P A SCP PC C++ IVDCR KGL ++P LP
Sbjct: 247 HLRGFNVADVQKKEYVCPAPHSEPPSCNANSISCPSPCTCSNNIVDCRGKGLMEIPANLP 306
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N
Sbjct: 307 EGIVEIRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 366
Query: 184 LT------------------------------------------------YLPDGVFAEL 195
+T + G+FA L
Sbjct: 367 ITEIVKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPL 426
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N F+CDCHL WL +L+ P +C +P + + I I +F+CS
Sbjct: 427 QSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCS 486
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
GS + RS+ + EC + CP CRC IVDC + L +
Sbjct: 487 GSE-DYRSRF--------------------SSECFMDLVCPEKCRCEGTIVDCSNQKLVR 525
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P LPE T+L D VL + I FK+ N R L N I E+ AF
Sbjct: 526 IPSHLPEYVTDLRLN---DNEVSVLEATGI---FKKLPNLRKINLSNNKIKEVREGAFDG 579
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ + L N + + + F L+ +
Sbjct: 580 AASVQELMLTGNQLETVHGRVFRGLSGLKTL 610
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 131/471 (27%), Positives = 204/471 (43%), Gaps = 96/471 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 409 SLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 468
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + + + EC + CP CRC IVDC + L ++P
Sbjct: 469 RLANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLVRIPS 528
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVDA--------- 167
LPE T+LRL N+++ L F LR+I+LS N+I +V A D
Sbjct: 529 HLPEYVTDLRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELML 588
Query: 168 ------------FQGLKSLTS------------------------LTLNNNNLTYLPDGV 191
F+GL L + L+L +N +T + G
Sbjct: 589 TGNQLETVHGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGA 648
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L T+ + N F C+CHL+WL +WL++ + +C P +K I D+ +
Sbjct: 649 FTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 708
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ EE S C P CP C C + +V C K
Sbjct: 709 FTCDGN----------EESS-----------------CQLSPRCPEQCTCMETVVRCSNK 741
Query: 312 GLNKVPILLPEATTEL----TYMVSIDRVDKVL----LYSYISNNFKRWTNRSRR----- 358
GL +P +P+ TEL ++ ++ R L L +N+ TN +
Sbjct: 742 GLRALPRGMPKDVTELYLEGNHLTAVPRELSALRHLTLIDLSNNSISMLTNYTFSNMSHL 801
Query: 359 ----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P AF + LR + L NDI+ +P +F + L +
Sbjct: 802 STLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHL 852
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 142/294 (48%), Gaps = 57/294 (19%)
Query: 115 LNKVPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL ++T T L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 121 LQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRAL 180
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T
Sbjct: 181 RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFT 240
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
C AP H++G N+ D+ + E+ C P +P A
Sbjct: 241 LCMAPVHLRGFNVADVQKKEYVCPA------------------------PHSEPPSCNAN 276
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP PC C++ IVDCR KGL ++P LPE E+
Sbjct: 277 SISCPSPCTCSNNIVDCRGKGLMEIPANLPEGIVEI------------------------ 312
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF YK+L+RI + +N I+++ P AF K L +
Sbjct: 313 ------RLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 360
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 134/277 (48%), Gaps = 28/277 (10%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CHL+WL +WL++ + +C P
Sbjct: 635 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPF 694
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C + +V C KGL +P +P
Sbjct: 695 FLKEIPIQDVAIQDFTCDGNEES---SCQLSPRCPEQCTCMETVVRCSNKGLRALPRGMP 751
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISK--------------------- 162
+ TEL LE N +T +P + + + L IDLS N IS
Sbjct: 752 KDVTELYLEGNHLTAVP-RELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNR 810
Query: 163 ---VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
+ V AF GL+SL LTL+ N+++ +P+G F +L L L + N CDC L WL
Sbjct: 811 LRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSE 870
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C +P + + +L P H F+C G
Sbjct: 871 WVKAGYKEPGIARCSSPEPMADRLLLTTPTHRFQCKG 907
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TL+ N+++ +P+G F +L L L + N CDC L WL W+K + +C +P
Sbjct: 829 TLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSSPE 888
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ + +L P H F+C GPV+
Sbjct: 889 PMADRLLLTTPTHRFQCKGPVD 910
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTY-MVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ VDC GL VP +P L +I R+ K+ +F
Sbjct: 33 ACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKM--------DFAGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R LE N ++ + AF + K+L R+RL +N + LP F + +L R+
Sbjct: 85 KNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRL 138
>gi|359323220|ref|XP_543947.4| PREDICTED: slit homolog 1 protein [Canis lupus familiaris]
Length = 1534
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 152/456 (33%), Positives = 225/456 (49%), Gaps = 78/456 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 187 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEKP-TGECA-AEPSCPHPCRCADGIVDCREKGLNKVPIL 121
++G N+ ++ + EF CSG E C + SCP C C++GIVDCR KGL +P
Sbjct: 247 SLRGLNVAEVQKSEFSCSGQGEAGRVPSCTLSSGSCPAMCSCSNGIVDCRGKGLTAIPAN 306
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
LPE TE+RLE N I +PP AF+ Y++LRRIDLS NQI+++A DAFQGL+SL SL L
Sbjct: 307 LPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYG 366
Query: 182 NNLTYLPDGVFA------------------------------------------------ 193
N +T LP GVF
Sbjct: 367 NKITDLPRGVFGGLYTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQSLAKGTFT 426
Query: 194 ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFK 253
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I +F+
Sbjct: 427 SLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANKRIGQIKSKKFR 486
Query: 254 CSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL 313
CS + + + T+ + NS EC ++ CPH CRC + +C L
Sbjct: 487 CS-----AKEQYFIP--GTEDYQLNS--------ECNSDAVCPHKCRCEASLAECSSLKL 531
Query: 314 NKVPILLPEATTEL---TYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPP 369
K+P +P++T EL +SI + FK+ T+ + L N ++E+
Sbjct: 532 TKIPERIPQSTAELRLNNNEISILEATGI---------FKKLTHLKKINLSNNKVSEIED 582
Query: 370 KAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
AF + + L N + + F LR +
Sbjct: 583 GAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTL 618
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 106/294 (36%), Positives = 149/294 (50%), Gaps = 55/294 (18%)
Query: 115 LNKVPILL---PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L+ +P LL +A + L L +N I +P KAF L+ + L KNQIS + AF+ L
Sbjct: 121 LHTLPELLFQNNQALSRLDLSENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRAL 180
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T
Sbjct: 181 RGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFT 240
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C P+ ++G N+ ++ + EF CSG R SC + +
Sbjct: 241 QCSGPASLRGLNVAEVQKSEFSCSGQGEAGRVP--------------SCTL--------S 278
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++GIVDCR KGL +P LPE TE+
Sbjct: 279 SGSCPAMCSCSNGIVDCRGKGLTAIPANLPETMTEI------------------------ 314
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLE N I +PP AF+ Y++LRRI L N I E+ P AF + L +
Sbjct: 315 ------RLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSL 362
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 189/451 (41%), Gaps = 91/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 411 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPR 470
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + EC ++ CPH CRC + +C
Sbjct: 471 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDAVCPHKCRCEASLAECSSLK 530
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L K+P +P++T ELRL N+I+ L F L++I+LS N++S++ AF+G
Sbjct: 531 LTKIPERIPQSTAELRLNNNEISILEATGIFKKLTHLKKINLSNNKVSEIEDGAFEGAAS 590
Query: 171 ---------------------LKSLTSLTLNNNNLTYLPD-------------------- 189
L L +L L NN ++ + +
Sbjct: 591 VSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIA 650
Query: 190 ----GVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
G F L L TL + N F C+C L+WL WL+R + +C P ++ +
Sbjct: 651 TISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRRRKIVTGNPRCQNPDFLRQIPLQ 710
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E G C P CP C C D +
Sbjct: 711 DVAFPDFRCEEGQEE--------------------------GSCLPRPQCPQECACLDTV 744
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L+ +P +P+ TEL +D L+ +S FK + L N I+
Sbjct: 745 VRCSNKHLHVLPKGIPKNVTELY----LDGNQFTLVPGQLS-TFKYL--QLVDLSNNKIS 797
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L +F N +L + L N + +PP AF
Sbjct: 798 SLSNSSFTNMSQLTTLILSYNALQCIPPLAF 828
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + + G F L L TL + N F C+C L+WL WL+R + +C P
Sbjct: 643 SLYDNQIATISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRRRKIVTGNPRCQNPD 702
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ G C P CP C C D +V C K L+ +P +P
Sbjct: 703 FLRQIPLQDVAFPDFRCEEGQEE--GSCLPRPQCPQECACLDTVVRCSNKHLHVLPKGIP 760
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TEL L+ N T L P + +K L+ +DLS N+IS ++ +F + LT+L L+ N
Sbjct: 761 KNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 819
Query: 184 LTYLP------------------------DGVFAELFRLRTLRISENSFICDCHLSWLHR 219
L +P +G+F ++ L L I N CDCHL WL
Sbjct: 820 LQCIPPLAFQGLRSLRLLSLHGNDISTLREGIFTDVTSLSHLAIGANPLYCDCHLRWLSS 879
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 880 WVKTGYKEPGIARCVGPPDMEGKLLLTTPAKKFECQG 916
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 57/113 (50%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDC GL +P +P +T L L N+IT + F K+LR + L
Sbjct: 33 ACPALCTCTGATVDCHGAGLQAIPKNIPRSTERLELNGNNITRIHKNDFVGLKQLRVLQL 92
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+NQI V AF +K L L LN N L LP+ +F L L +SEN+
Sbjct: 93 MENQIGVVERGAFDDMKELERLRLNRNQLHTLPELLFQNNQALSRLDLSENTI 145
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNNFKRW 352
+CP C C VDC GL +P +P +T L +I R+ K N+F
Sbjct: 33 ACPALCTCTGATVDCHGAGLQAIPKNIPRSTERLELNGNNITRIHK--------NDFVGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I + AF + K L R+RL +N + LP F N + L R+
Sbjct: 85 KQLRVLQLMENQIGVVERGAFDDMKELERLRLNRNQLHTLPELLFQNNQALSRL 138
>gi|301763234|ref|XP_002917045.1| PREDICTED: slit homolog 1 protein-like [Ailuropoda melanoleuca]
Length = 1622
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 151/456 (33%), Positives = 226/456 (49%), Gaps = 78/456 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 275 TLNNNNISTIPVSSFNHMPKLRTFRLHSNRLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 334
Query: 64 HIKGQNILDIPEHEFKCSGPVEKP-TGECA-AEPSCPHPCRCADGIVDCREKGLNKVPIL 121
++G N+ ++ + EF CSG E C + SCP C C++GIVDCR KGL +P
Sbjct: 335 SLRGLNVAEVQKSEFSCSGQGEAGRVPSCTLSSGSCPAMCTCSNGIVDCRGKGLTAIPAN 394
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
LPE TE+RLE N I +PP AF+ Y++LRRIDLS NQI+++A DAFQGL+SL SL L
Sbjct: 395 LPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYG 454
Query: 182 NNLTYLPDGVFA------------------------------------------------ 193
N +T LP GVF
Sbjct: 455 NKITDLPRGVFGGLYTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQSLAKGTFT 514
Query: 194 ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFK 253
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I +F+
Sbjct: 515 SLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANKRIGQIKSKKFR 574
Query: 254 CSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL 313
CS + + + T+ + NS EC+++ CPH CRC + +C L
Sbjct: 575 CS-----AKEQYFIP--GTEDYQLNS--------ECSSDAVCPHKCRCEASLAECSSLKL 619
Query: 314 NKVPILLPEATTEL---TYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPP 369
K+P +P++T EL +SI + FK+ T+ + L N ++E+
Sbjct: 620 TKIPERIPQSTAELRLNNNEISILEATGI---------FKKLTHLKKINLSNNKVSEIED 670
Query: 370 KAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
AF + + L N + + F LR +
Sbjct: 671 GAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTL 706
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/282 (35%), Positives = 143/282 (50%), Gaps = 52/282 (18%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+A + L L +N I +P KAF L+ + L KNQIS + AF+ L+ L LTLNNNN
Sbjct: 221 QALSRLDLSENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNN 280
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
++ +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+ ++G N
Sbjct: 281 ISTIPVSSFNHMPKLRTFRLHSNRLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLN 340
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
+ ++ + EF CSG R SC + + SCP C C++
Sbjct: 341 VAEVQKSEFSCSGQGEAGRVP--------------SCTL--------SSGSCPAMCTCSN 378
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQND 363
GIVDCR KGL +P LPE TE+ RLE N
Sbjct: 379 GIVDCRGKGLTAIPANLPETMTEI------------------------------RLELNG 408
Query: 364 ITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I +PP AF+ Y++LRRI L N I E+ P AF + L +
Sbjct: 409 IKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSL 450
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 189/451 (41%), Gaps = 91/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 499 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPR 558
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + EC+++ CPH CRC + +C
Sbjct: 559 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECSSDAVCPHKCRCEASLAECSSLK 618
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L K+P +P++T ELRL N+I+ L F L++I+LS N++S++ AF+G
Sbjct: 619 LTKIPERIPQSTAELRLNNNEISILEATGIFKKLTHLKKINLSNNKVSEIEDGAFEGAAS 678
Query: 171 ---------------------LKSLTSLTLNNNNLTYLPD-------------------- 189
L L +L L NN ++ + +
Sbjct: 679 VSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIA 738
Query: 190 ----GVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
G F L L TL + N F C+C L+WL WL+R + +C P ++ +
Sbjct: 739 TISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRRRKIVTGNPRCQNPDFLRQIPLQ 798
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E G C P CP C C D +
Sbjct: 799 DVAFPDFRCEEGQEE--------------------------GGCLPRPQCPQECACLDTV 832
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L +P +P+ TEL +D L+ +S FK + L N I+
Sbjct: 833 VRCSNKHLQVLPKGIPKNVTELY----LDGNQFTLVPGQLS-TFKYL--QLVDLSNNKIS 885
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L +F N +L + L N + +PP AF
Sbjct: 886 SLSNSSFTNMSQLTTLILSYNALQCIPPLAF 916
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 131/277 (47%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + + G F L L TL + N F C+C L+WL WL+R + +C P
Sbjct: 731 SLYDNQIATISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRRRKIVTGNPRCQNPD 790
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ G C P CP C C D +V C K L +P +P
Sbjct: 791 FLRQIPLQDVAFPDFRCEEGQEE--GGCLPRPQCPQECACLDTVVRCSNKHLQVLPKGIP 848
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TEL L+ N T L P + +K L+ +DLS N+IS ++ +F + LT+L L+ N
Sbjct: 849 KNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 907
Query: 184 LTYLP------------------------DGVFAELFRLRTLRISENSFICDCHLSWLHR 219
L +P +G+F + L L I N CDCHL WL
Sbjct: 908 LQCIPPLAFQGLRSLRLLSLHGNDISSLREGIFTDATSLSHLAIGANPLYCDCHLRWLSG 967
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 968 WVKTGYKEPGIARCAGPPDMEGKLLLTTPAKKFECQG 1004
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 57/113 (50%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDC GL +P +P T L L N+IT + FA K+LR + L
Sbjct: 121 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQL 180
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+NQI V AF +K L L LN N L LP+ +F L L +SEN+
Sbjct: 181 MENQIGVVERGAFDDMKELERLRLNRNQLHLLPELLFQNNQALSRLDLSENTI 233
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C VDC GL +P +P T L + I R+ K N+F
Sbjct: 121 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHK--------NDFAGL 172
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I + AF + K L R+RL +N + LP F N + L R+
Sbjct: 173 KQLRVLQLMENQIGVVERGAFDDMKELERLRLNRNQLHLLPELLFQNNQALSRL 226
>gi|226823283|ref|NP_035542.2| slit homolog 3 protein precursor [Mus musculus]
gi|341942041|sp|Q9WVB4.2|SLIT3_MOUSE RecName: Full=Slit homolog 3 protein; Short=Slit-3; Short=Slit3;
Flags: Precursor
Length = 1523
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 155/451 (34%), Positives = 220/451 (48%), Gaps = 76/451 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 187 TLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFTLCMAPV 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G ++ D+ + E+ C GP + A SCP C C++ IVDCR KGL ++P LP
Sbjct: 247 HLRGFSVADVQKKEYVCPGPHSEAPACNANSLSCPSACSCSNNIVDCRGKGLTEIPANLP 306
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N
Sbjct: 307 EGIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 366
Query: 184 LTYLP------------------------------------------------DGVFAEL 195
+T +P G+F L
Sbjct: 367 ITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFVPL 426
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N F+CDCHL WL +L+ P +C +P + + I I +F+CS
Sbjct: 427 QSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCS 486
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
G S+ YR S+ EC + CP CRC IVDC + L +
Sbjct: 487 G------SEDYRNRFSS---------------ECFMDLVCPEKCRCEGTIVDCSNQKLAR 525
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P LPE TT+L D VL + I FK+ N R L N I E+ AF
Sbjct: 526 IPSHLPEYTTDLRLN---DNDISVLEATGI---FKKLPNLRKINLSNNRIKEVREGAFDG 579
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ + L N + + + F L+ +
Sbjct: 580 AAGVQELMLTGNQLETMHGRMFRGLSSLKTL 610
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 131/471 (27%), Positives = 207/471 (43%), Gaps = 96/471 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+F L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 409 SLYDNKLQTISKGLFVPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 468
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + + + EC + CP CRC IVDC + L ++P
Sbjct: 469 RLANKRISQIKSKKFRCSGSEDYRNRFSSECFMDLVCPEKCRCEGTIVDCSNQKLARIPS 528
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVDA--------- 167
LPE TT+LRL NDI+ L F LR+I+LS N+I +V A D
Sbjct: 529 HLPEYTTDLRLNDNDISVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELML 588
Query: 168 ------------FQGLKSLTS------------------------LTLNNNNLTYLPDGV 191
F+GL SL + L+L +N +T + G
Sbjct: 589 TGNQLETMHGRMFRGLSSLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGA 648
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L T+ + N F C+CH++WL RWL++ + +C P +K I D+ +
Sbjct: 649 FTTLVSLSTINLLSNPFNCNCHMAWLGRWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 708
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ EE S C P CP C C + +V C +
Sbjct: 709 FTCDGN----------EESS-----------------CQLSPRCPEQCTCVETVVRCSNR 741
Query: 312 GLNKVPILLPEATTEL----TYMVSIDR----VDKVLLYSYISNNFKRWTNRSRR----- 358
GL+ +P +P+ TEL ++ ++ + ++ L +N+ TN +
Sbjct: 742 GLHALPKGMPKDVTELYLEGNHLTAVPKELSAFRQLTLIDLSNNSISMLTNHTFSNMSHL 801
Query: 359 ----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P AF + LR + L NDI+ +P +F + L +
Sbjct: 802 STLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHL 852
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 143/294 (48%), Gaps = 57/294 (19%)
Query: 115 LNKVPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL ++T T L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 121 LQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRAL 180
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T
Sbjct: 181 RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFT 240
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
C AP H++G ++ D+ + E+ C G P++ P A
Sbjct: 241 LCMAPVHLRGFSVADVQKKEYVCPG-------------------PHSEAPACN-----AN 276
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++ IVDCR KGL ++P LPE E+
Sbjct: 277 SLSCPSACSCSNNIVDCRGKGLTEIPANLPEGIVEI------------------------ 312
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF YK+L+RI + +N I+++ P AF K L +
Sbjct: 313 ------RLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 360
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 137/277 (49%), Gaps = 28/277 (10%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CH++WL RWL++ + +C P
Sbjct: 635 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHMAWLGRWLRKRRIVSGNPRCQKPF 694
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C + +V C +GL+ +P +P
Sbjct: 695 FLKEIPIQDVAIQDFTCDGNEES---SCQLSPRCPEQCTCVETVVRCSNRGLHALPKGMP 751
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISK--------------------- 162
+ TEL LE N +T +P K + +++L IDLS N IS
Sbjct: 752 KDVTELYLEGNHLTAVP-KELSAFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNR 810
Query: 163 ---VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
+ V AF GL+SL LTL+ N+++ +P+G F +L L L + N CDC L WL
Sbjct: 811 LRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSE 870
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C +P + + +L P H F+C G
Sbjct: 871 WVKAGYKEPGIARCSSPESMADRLLLTTPTHRFQCKG 907
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTY-MVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ VDC GL VP +P L +I R+ K+ +F
Sbjct: 33 ACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKM--------DFAGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R LE N ++ + AF + K+L R+RL +N + LP F + +L R+
Sbjct: 85 KNLRVLHLEDNQVSIIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRL 138
>gi|74181116|dbj|BAE27826.1| unnamed protein product [Mus musculus]
Length = 1523
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 155/451 (34%), Positives = 220/451 (48%), Gaps = 76/451 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 187 TLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFTLCMAPV 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G ++ D+ + E+ C GP + A SCP C C++ IVDCR KGL ++P LP
Sbjct: 247 HLRGFSVADVQKKEYVCPGPHSEAPACNANSLSCPSACSCSNNIVDCRGKGLTEIPANLP 306
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N
Sbjct: 307 EGIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 366
Query: 184 LTYLP------------------------------------------------DGVFAEL 195
+T +P G+F L
Sbjct: 367 ITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFVPL 426
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N F+CDCHL WL +L+ P +C +P + + I I +F+CS
Sbjct: 427 QSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCS 486
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
G S+ YR S+ EC + CP CRC IVDC + L +
Sbjct: 487 G------SEDYRNRFSS---------------ECFMDLVCPEKCRCEGTIVDCSNQKLAR 525
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P LPE TT+L D VL + I FK+ N R L N I E+ AF
Sbjct: 526 IPSHLPEYTTDLRLN---DNDISVLEATGI---FKKLPNLRKINLSNNRIKEVREGAFDG 579
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ + L N + + + F L+ +
Sbjct: 580 AAGVQELMLTGNQLETMHGRMFRGLSSLKTL 610
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 131/471 (27%), Positives = 207/471 (43%), Gaps = 96/471 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+F L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 409 SLYDNKLQTISKGLFVPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 468
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + + + EC + CP CRC IVDC + L ++P
Sbjct: 469 RLANKRISQIKSKKFRCSGSEDYRNRFSSECFMDLVCPEKCRCEGTIVDCSNQKLARIPS 528
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVDA--------- 167
LPE TT+LRL NDI+ L F LR+I+LS N+I +V A D
Sbjct: 529 HLPEYTTDLRLNDNDISVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELML 588
Query: 168 ------------FQGLKSLTS------------------------LTLNNNNLTYLPDGV 191
F+GL SL + L+L +N +T + G
Sbjct: 589 TGNQLETMHGRMFRGLSSLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGA 648
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L T+ + N F C+CH++WL RWL++ + +C P +K I D+ +
Sbjct: 649 FTTLVSLSTINLLSNPFNCNCHMAWLGRWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 708
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ EE S C P CP C C + +V C +
Sbjct: 709 FTCDGN----------EESS-----------------CQLSPRCPEQCTCVETVVRCSNR 741
Query: 312 GLNKVPILLPEATTEL----TYMVSIDR----VDKVLLYSYISNNFKRWTNRSRR----- 358
GL+ +P +P+ TEL ++ ++ + ++ L +N+ TN +
Sbjct: 742 GLHALPKGMPKDVTELYLEGNHLTAVPKELSAFRQLTLIDLSNNSISMLTNHTFSNMSHL 801
Query: 359 ----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P AF + LR + L NDI+ +P +F + L +
Sbjct: 802 STLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHL 852
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 143/294 (48%), Gaps = 57/294 (19%)
Query: 115 LNKVPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL ++T T L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 121 LQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRAL 180
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T
Sbjct: 181 RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFT 240
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
C AP H++G ++ D+ + E+ C G P++ P A
Sbjct: 241 LCMAPVHLRGFSVADVQKKEYVCPG-------------------PHSEAPACN-----AN 276
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++ IVDCR KGL ++P LPE E+
Sbjct: 277 SLSCPSACSCSNNIVDCRGKGLTEIPANLPEGIVEI------------------------ 312
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF YK+L+RI + +N I+++ P AF K L +
Sbjct: 313 ------RLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 360
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 137/277 (49%), Gaps = 28/277 (10%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CH++WL RWL++ + +C P
Sbjct: 635 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHMAWLGRWLRKRRIVSGNPRCQKPF 694
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C + +V C +GL+ +P +P
Sbjct: 695 FLKEIPIQDVAIQDFTCDGNEES---SCQLSPRCPEQCTCVETVVRCSNRGLHALPKGMP 751
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISK--------------------- 162
+ TEL LE N +T +P K + +++L IDLS N IS
Sbjct: 752 KDVTELYLEGNHLTAVP-KELSAFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNR 810
Query: 163 ---VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
+ V AF GL+SL LTL+ N+++ +P+G F +L L L + N CDC L WL
Sbjct: 811 LRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSE 870
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C +P + + +L P H F+C G
Sbjct: 871 WVKAGYKEPGIARCSSPESMADRLLLTTPTHRFQCKG 907
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTY-MVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ VDC GL VP +P L +I R+ K+ +F
Sbjct: 33 ACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKM--------DFAGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R LE N ++ + AF + K+L R+RL +N + LP F + +L R+
Sbjct: 85 KNLRVLHLEDNQVSIIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRL 138
>gi|410227220|gb|JAA10829.1| slit homolog 3 [Pan troglodytes]
Length = 1523
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 155/451 (34%), Positives = 220/451 (48%), Gaps = 76/451 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 187 TLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFTLCMAPV 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ D+ + E+ C P +P A SCP PC C++ IVDCR KGL ++P LP
Sbjct: 247 HLRGFNVADVQKKEYVCPAPHLEPPSCNANSISCPSPCTCSNNIVDCRGKGLMEIPANLP 306
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N
Sbjct: 307 EGIVEIRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 366
Query: 184 LT------------------------------------------------YLPDGVFAEL 195
+T + G+FA L
Sbjct: 367 ITEIAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPL 426
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N F+CDCHL WL +L+ P +C +P + + I I +F+CS
Sbjct: 427 QSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCS 486
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
GS + RS+ + EC + CP CRC IVDC + L +
Sbjct: 487 GSE-DYRSRF--------------------SSECFMDLVCPEKCRCEGTIVDCSNQKLAR 525
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P LPE T+L D VL + I FK+ N R L N I E+ AF
Sbjct: 526 IPSHLPEYVTDLRLN---DNEVSVLEATGI---FKKLPNLRKINLSNNKIKEVREGAFDG 579
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ + L N + + + F L+ +
Sbjct: 580 AASVQELMLTGNQLETVHGRVFRGLSGLKTL 610
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 202/471 (42%), Gaps = 96/471 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 409 SLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 468
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + + + EC + CP CRC IVDC + L ++P
Sbjct: 469 RLANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLARIPS 528
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVDA--------- 167
LPE T+LRL N+++ L F LR+I+LS N+I +V A D
Sbjct: 529 HLPEYVTDLRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELML 588
Query: 168 ------------FQGLKSLTS------------------------LTLNNNNLTYLPDGV 191
F+GL L + L+L +N +T + G
Sbjct: 589 TGNQLETVHGRVFRGLSGLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGA 648
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L T+ + N F C+CHL+WL +WL++ + +C P +K I D+ +
Sbjct: 649 FTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 708
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ + C P CP C C + +V C K
Sbjct: 709 FTCDGNDESS---------------------------CQLSPRCPEQCTCMETVVRCSNK 741
Query: 312 GLNKVPILLPEATTEL----TYMVSIDRVDKVL----LYSYISNNFKRWTNRSRR----- 358
GL +P +P+ TEL ++ ++ R L L +N+ TN +
Sbjct: 742 GLRALPKGMPKDVTELYLEGNHLTAVPRELSALRHLTLIDLSNNSISMLTNYTFSNMSHL 801
Query: 359 ----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P AF + LR + L NDI+ +P +F + L +
Sbjct: 802 STLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHL 852
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 142/294 (48%), Gaps = 57/294 (19%)
Query: 115 LNKVPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL ++T T L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 121 LQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRAL 180
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T
Sbjct: 181 RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFT 240
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
C AP H++G N+ D+ + E+ C +E P A
Sbjct: 241 LCMAPVHLRGFNVADVQKKEYVCPAPHLE------------------------PPSCNAN 276
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP PC C++ IVDCR KGL ++P LPE E+
Sbjct: 277 SISCPSPCTCSNNIVDCRGKGLMEIPANLPEGIVEI------------------------ 312
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF YK+L+RI + +N I+++ P AF K L +
Sbjct: 313 ------RLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 360
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 134/277 (48%), Gaps = 28/277 (10%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CHL+WL +WL++ + +C P
Sbjct: 635 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPF 694
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C + +V C KGL +P +P
Sbjct: 695 FLKEIPIQDVAIQDFTCDGNDES---SCQLSPRCPEQCTCMETVVRCSNKGLRALPKGMP 751
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISK--------------------- 162
+ TEL LE N +T +P + + + L IDLS N IS
Sbjct: 752 KDVTELYLEGNHLTAVP-RELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNR 810
Query: 163 ---VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
+ V AF GL+SL LTL+ N+++ +P+G F +L L L + N CDC L WL
Sbjct: 811 LRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSE 870
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C +P + + +L P H F+C G
Sbjct: 871 WVKAGYKEPGIARCSSPEPMADRLLLTTPTHRFQCKG 907
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TL+ N+++ +P+G F +L L L + N CDC L WL W+K + +C +P
Sbjct: 829 TLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSSPE 888
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ + +L P H F+C GPV+
Sbjct: 889 PMADRLLLTTPTHRFQCKGPVD 910
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTY-MVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ VDC GL VP +P L +I R+ K+ +F
Sbjct: 33 ACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKM--------DFAGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R LE N ++ + AF + K+L R+RL +N + LP F + +L R+
Sbjct: 85 KNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRL 138
>gi|410353883|gb|JAA43545.1| slit homolog 3 [Pan troglodytes]
Length = 1523
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 155/451 (34%), Positives = 220/451 (48%), Gaps = 76/451 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 187 TLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFTLCMAPV 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ D+ + E+ C P +P A SCP PC C++ IVDCR KGL ++P LP
Sbjct: 247 HLRGFNVADVQKKEYVCPAPHLEPPSCNANSISCPSPCTCSNNIVDCRGKGLMEIPANLP 306
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N
Sbjct: 307 EGIVEIRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 366
Query: 184 LT------------------------------------------------YLPDGVFAEL 195
+T + G+FA L
Sbjct: 367 ITEIAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPL 426
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N F+CDCHL WL +L+ P +C +P + + I I +F+CS
Sbjct: 427 QSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCS 486
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
GS + RS+ + EC + CP CRC IVDC + L +
Sbjct: 487 GSE-DYRSRF--------------------SSECFMDLVCPEKCRCEGTIVDCSNQKLAR 525
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P LPE T+L D VL + I FK+ N R L N I E+ AF
Sbjct: 526 IPSHLPEYVTDLRLN---DNEVSVLEATGI---FKKLPNLRKINLSNNKIKEVREGAFDG 579
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ + L N + + + F L+ +
Sbjct: 580 AASVQELMLTGNQLETVHGRVFRGLSGLKTL 610
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 202/471 (42%), Gaps = 96/471 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 409 SLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 468
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + + + EC + CP CRC IVDC + L ++P
Sbjct: 469 RLANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLARIPS 528
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVDA--------- 167
LPE T+LRL N+++ L F LR+I+LS N+I +V A D
Sbjct: 529 HLPEYVTDLRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELML 588
Query: 168 ------------FQGLKSLTS------------------------LTLNNNNLTYLPDGV 191
F+GL L + L+L +N +T + G
Sbjct: 589 TGNQLETVHGRVFRGLSGLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGA 648
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L T+ + N F C+CHL+WL +WL++ + +C P +K I D+ +
Sbjct: 649 FTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 708
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ + C P CP C C + +V C K
Sbjct: 709 FTCDGNDESS---------------------------CQLSPRCPEQCTCMETVVRCSNK 741
Query: 312 GLNKVPILLPEATTEL----TYMVSIDRVDKVL----LYSYISNNFKRWTNRSRR----- 358
GL +P +P+ TEL ++ ++ R L L +N+ TN +
Sbjct: 742 GLRALPKGMPKDVTELYLEGNHLTAVPRELSALRHLTLIDLSNNSISMLTNYTFSNMSHL 801
Query: 359 ----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P AF + LR + L NDI+ +P +F + L +
Sbjct: 802 STLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHL 852
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 142/294 (48%), Gaps = 57/294 (19%)
Query: 115 LNKVPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL ++T T L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 121 LQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRAL 180
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T
Sbjct: 181 RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFT 240
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
C AP H++G N+ D+ + E+ C +E P A
Sbjct: 241 LCMAPVHLRGFNVADVQKKEYVCPAPHLE------------------------PPSCNAN 276
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP PC C++ IVDCR KGL ++P LPE E+
Sbjct: 277 SISCPSPCTCSNNIVDCRGKGLMEIPANLPEGIVEI------------------------ 312
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF YK+L+RI + +N I+++ P AF K L +
Sbjct: 313 ------RLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 360
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 134/277 (48%), Gaps = 28/277 (10%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CHL+WL +WL++ + +C P
Sbjct: 635 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPF 694
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C + +V C KGL +P +P
Sbjct: 695 FLKEIPIQDVAIQDFTCDGNDES---SCQLSPRCPEQCTCMETVVRCSNKGLRALPKGMP 751
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISK--------------------- 162
+ TEL LE N +T +P + + + L IDLS N IS
Sbjct: 752 KDVTELYLEGNHLTAVP-RELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNR 810
Query: 163 ---VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
+ V AF GL+SL LTL+ N+++ +P+G F +L L L + N CDC L WL
Sbjct: 811 LRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSE 870
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C +P + + +L P H F+C G
Sbjct: 871 WVKAGYKEPGIARCSSPEPMADRLLLTTPTHRFQCKG 907
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TL+ N+++ +P+G F +L L L + N CDC L WL W+K + +C +P
Sbjct: 829 TLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSSPE 888
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ + +L P H F+C GPV+
Sbjct: 889 PMADRLLLTTPTHRFQCKGPVD 910
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTY-MVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ VDC GL VP +P L +I R+ K+ +F
Sbjct: 33 ACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKM--------DFAGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R LE N ++ + AF + K+L R+RL +N + LP F + +L R+
Sbjct: 85 KNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRL 138
>gi|187956543|gb|AAI50781.1| Slit homolog 3 (Drosophila) [Mus musculus]
Length = 1523
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 155/451 (34%), Positives = 220/451 (48%), Gaps = 76/451 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 187 TLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFTLCMAPV 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G ++ D+ + E+ C GP + A SCP C C++ IVDCR KGL ++P LP
Sbjct: 247 HLRGFSVADVQKKEYVCPGPHSEAPACNANSLSCPSACSCSNNIVDCRGKGLTEIPANLP 306
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N
Sbjct: 307 EGIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 366
Query: 184 LTYLP------------------------------------------------DGVFAEL 195
+T +P G+F L
Sbjct: 367 ITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFVPL 426
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N F+CDCHL WL +L+ P +C +P + + I I +F+CS
Sbjct: 427 QSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCS 486
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
G S+ YR S+ EC + CP CRC IVDC + L +
Sbjct: 487 G------SEDYRNRFSS---------------ECFMDLVCPEKCRCEGTIVDCSNQKLAR 525
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P LPE TT+L D VL + I FK+ N R L N I E+ AF
Sbjct: 526 IPSHLPEYTTDLRLN---DNDISVLEATGI---FKKLPNLRKINLSNNRIKEVREGAFDG 579
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ + L N + + + F L+ +
Sbjct: 580 AAGVQELMLTGNQLETMHGRMFRGLSGLKTL 610
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 130/471 (27%), Positives = 206/471 (43%), Gaps = 96/471 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+F L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 409 SLYDNKLQTISKGLFVPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 468
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + + + EC + CP CRC IVDC + L ++P
Sbjct: 469 RLANKRISQIKSKKFRCSGSEDYRNRFSSECFMDLVCPEKCRCEGTIVDCSNQKLARIPS 528
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVDA--------- 167
LPE TT+LRL NDI+ L F LR+I+LS N+I +V A D
Sbjct: 529 HLPEYTTDLRLNDNDISVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELML 588
Query: 168 ------------FQGLKSLTS------------------------LTLNNNNLTYLPDGV 191
F+GL L + L+L +N +T + G
Sbjct: 589 TGNQLETMHGRMFRGLSGLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGA 648
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L T+ + N F C+CH++WL RWL++ + +C P +K I D+ +
Sbjct: 649 FTTLVSLSTINLLSNPFNCNCHMAWLGRWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 708
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ EE S C P CP C C + +V C +
Sbjct: 709 FTCDGN----------EESS-----------------CQLSPRCPEQCTCVETVVRCSNR 741
Query: 312 GLNKVPILLPEATTEL----TYMVSIDR----VDKVLLYSYISNNFKRWTNRSRR----- 358
GL+ +P +P+ TEL ++ ++ + ++ L +N+ TN +
Sbjct: 742 GLHALPKGMPKDVTELYLEGNHLTAVPKELSAFRQLTLIDLSNNSISMLTNHTFSNMSHL 801
Query: 359 ----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P AF + LR + L NDI+ +P +F + L +
Sbjct: 802 STLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHL 852
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 143/294 (48%), Gaps = 57/294 (19%)
Query: 115 LNKVPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL ++T T L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 121 LQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRAL 180
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T
Sbjct: 181 RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFT 240
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
C AP H++G ++ D+ + E+ C G P++ P A
Sbjct: 241 LCMAPVHLRGFSVADVQKKEYVCPG-------------------PHSEAPACN-----AN 276
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++ IVDCR KGL ++P LPE E+
Sbjct: 277 SLSCPSACSCSNNIVDCRGKGLTEIPANLPEGIVEI------------------------ 312
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF YK+L+RI + +N I+++ P AF K L +
Sbjct: 313 ------RLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 360
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 137/277 (49%), Gaps = 28/277 (10%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CH++WL RWL++ + +C P
Sbjct: 635 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHMAWLGRWLRKRRIVSGNPRCQKPF 694
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C + +V C +GL+ +P +P
Sbjct: 695 FLKEIPIQDVAIQDFTCDGNEES---SCQLSPRCPEQCTCVETVVRCSNRGLHALPKGMP 751
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISK--------------------- 162
+ TEL LE N +T +P K + +++L IDLS N IS
Sbjct: 752 KDVTELYLEGNHLTAVP-KELSAFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNR 810
Query: 163 ---VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
+ V AF GL+SL LTL+ N+++ +P+G F +L L L + N CDC L WL
Sbjct: 811 LRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSE 870
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C +P + + +L P H F+C G
Sbjct: 871 WVKAGYKEPGIARCSSPESMADRLLLTTPTHRFQCKG 907
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTY-MVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ VDC GL VP +P L +I R+ K+ +F
Sbjct: 33 ACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKM--------DFAGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R LE N ++ + AF + K+L R+RL +N + LP F + +L R+
Sbjct: 85 KNLRVLHLEDNQVSIIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRL 138
>gi|5532497|gb|AAD44760.1|AF144629_1 SLIT3 [Mus musculus]
Length = 1523
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 155/451 (34%), Positives = 220/451 (48%), Gaps = 76/451 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 187 TLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFTLCMAPV 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G ++ D+ + E+ C GP + A SCP C C++ IVDCR KGL ++P LP
Sbjct: 247 HLRGFSVADVQKKEYVCPGPHSEAPACNANSLSCPSACSCSNNIVDCRGKGLTEIPANLP 306
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N
Sbjct: 307 EGIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 366
Query: 184 LTYLP------------------------------------------------DGVFAEL 195
+T +P G+F L
Sbjct: 367 ITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFVPL 426
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N F+CDCHL WL +L+ P +C +P + + I I +F+CS
Sbjct: 427 QSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCS 486
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
G S+ YR S+ EC + CP CRC IVDC + L +
Sbjct: 487 G------SEDYRNRFSS---------------ECFMDLVCPEKCRCEGTIVDCSNQKLAR 525
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P LPE TT+L D VL + I FK+ N R L N I E+ AF
Sbjct: 526 IPSHLPEYTTDLRLN---DNDISVLEATGI---FKKLPNLRKINLSNNRIKEVREGAFDG 579
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ + L N + + + F L+ +
Sbjct: 580 AASVQELMLTGNQLETMHGRMFRGLSGLKTL 610
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 129/471 (27%), Positives = 205/471 (43%), Gaps = 96/471 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+F L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 409 SLYDNKLQTISKGLFVPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 468
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + + + EC + CP CRC IVDC + L ++P
Sbjct: 469 RLANKRISQIKSKKFRCSGSEDYRNRFSSECFMDLVCPEKCRCEGTIVDCSNQKLARIPS 528
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVDA--------- 167
LPE TT+LRL NDI+ L F LR+I+LS N+I +V A D
Sbjct: 529 HLPEYTTDLRLNDNDISVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAASVQELML 588
Query: 168 ------------FQGLKSLTS------------------------LTLNNNNLTYLPDGV 191
F+GL L + L+L +N +T + G
Sbjct: 589 TGNQLETMHGRMFRGLSGLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGA 648
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L T+ + N F C+CH++WL RWL++ + +C P +K I D+ +
Sbjct: 649 FTTLVSLSTINLLSNPFNCNCHMAWLGRWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 708
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ EE S C P CP C + +V C +
Sbjct: 709 FTCDGN----------EESS-----------------CQLSPRCPEQFTCVETVVRCSNR 741
Query: 312 GLNKVPILLPEATTEL----TYMVSIDR----VDKVLLYSYISNNFKRWTNRSRR----- 358
GL+ +P +P+ TEL ++ ++ + ++ L +N+ TN +
Sbjct: 742 GLHALPKGMPKDVTELYLEGNHLTAVPKELSAFRQLTLIDLSNNSISMLTNHTFSNMSHL 801
Query: 359 ----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P AF + LR + L NDI+ +P +F + L +
Sbjct: 802 STLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHL 852
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 143/294 (48%), Gaps = 57/294 (19%)
Query: 115 LNKVPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL ++T T L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 121 LQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRAL 180
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T
Sbjct: 181 RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFT 240
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
C AP H++G ++ D+ + E+ C G P++ P A
Sbjct: 241 LCMAPVHLRGFSVADVQKKEYVCPG-------------------PHSEAPACN-----AN 276
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++ IVDCR KGL ++P LPE E+
Sbjct: 277 SLSCPSACSCSNNIVDCRGKGLTEIPANLPEGIVEI------------------------ 312
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF YK+L+RI + +N I+++ P AF K L +
Sbjct: 313 ------RLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 360
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 136/277 (49%), Gaps = 28/277 (10%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CH++WL RWL++ + +C P
Sbjct: 635 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHMAWLGRWLRKRRIVSGNPRCQKPF 694
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C + +V C +GL+ +P +P
Sbjct: 695 FLKEIPIQDVAIQDFTCDGNEES---SCQLSPRCPEQFTCVETVVRCSNRGLHALPKGMP 751
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISK--------------------- 162
+ TEL LE N +T +P K + +++L IDLS N IS
Sbjct: 752 KDVTELYLEGNHLTAVP-KELSAFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNR 810
Query: 163 ---VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
+ V AF GL+SL LTL+ N+++ +P+G F +L L L + N CDC L WL
Sbjct: 811 LRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSE 870
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C +P + + +L P H F+C G
Sbjct: 871 WVKAGYKEPGIARCSSPESMADRLLLTTPTHRFQCKG 907
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTY-MVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ VDC GL VP +P L +I R+ K+ +F
Sbjct: 33 ACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKM--------DFAGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R LE N ++ + AF + K+L R+RL +N + LP F + +L R+
Sbjct: 85 KNLRVLHLEDNQVSIIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRL 138
>gi|440912338|gb|ELR61917.1| Slit-like protein 3 protein, partial [Bos grunniens mutus]
Length = 1410
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 156/451 (34%), Positives = 219/451 (48%), Gaps = 75/451 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 73 TLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGPFTLCMAPV 132
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ D+ + E+ C GP +P A SCP C C++ IVDCR KGL ++P LP
Sbjct: 133 HLRGFNVADVQKKEYVCPGPHSEPPACNANSISCPSACTCSNNIVDCRGKGLTEIPANLP 192
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N
Sbjct: 193 EGIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 252
Query: 184 LTYLP------------------------------------------------DGVFAEL 195
+T +P G+FA L
Sbjct: 253 ITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQSLSLLSLYDNKLQTISKGLFAPL 312
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N F+CDCHL WL +L+ P +C +P + + I I +F+CS
Sbjct: 313 QAIQTLHLAQNPFVCDCHLRWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCS 372
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
R + R S+ EC + CP CRC IVDC + L +
Sbjct: 373 -----VREGLARGRTSS---------------ECFMDLVCPDRCRCEGTIVDCSNQKLAR 412
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P LPE T+L D VL + I FK+ N R L N I E+ AF
Sbjct: 413 IPSHLPEYVTDLRLN---DNEISVLEATGI---FKKLPNLRKINLSNNRIKEVKEGAFDG 466
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ + L N + +AF L+ +
Sbjct: 467 AASVQELVLTGNQLETAHGRAFRGLSGLKTL 497
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/471 (26%), Positives = 197/471 (41%), Gaps = 101/471 (21%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
+N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P +
Sbjct: 298 DNKLQTISKGLFAPLQAIQTLHLAQNPFVCDCHLRWLADYLQDNPIETSGARCSSPRRLA 357
Query: 67 GQNILDIPEHEFKCSG----PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILL 122
+ I I +F+CS + + EC + CP CRC IVDC + L ++P L
Sbjct: 358 NKRISQIKSKKFRCSVREGLARGRTSSECFMDLVCPDRCRCEGTIVDCSNQKLARIPSHL 417
Query: 123 PEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVD------------ 166
PE T+LRL N+I+ L F LR+I+LS N+I +V A D
Sbjct: 418 PEYVTDLRLNDNEISVLEATGIFKKLPNLRKINLSNNRIKEVKEGAFDGAASVQELVLTG 477
Query: 167 ---------AFQGLKSLTS------------------------LTLNNNNLTYLPDGVFA 193
AF+GL L + L+L +N +T + G F
Sbjct: 478 NQLETAHGRAFRGLSGLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFT 537
Query: 194 ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFK 253
L L T+ + N F C+CHL+WL +WL++ + +C P +K I D+ +F
Sbjct: 538 TLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFT 597
Query: 254 CSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL 313
C G+ + C P CP C C + +V C +GL
Sbjct: 598 CDGNDESS---------------------------CQLGPRCPEQCTCVETVVRCSNRGL 630
Query: 314 NKVPILLPEATTEL-------------------TYMVSIDRVDKVLLYSYISNNFKRWTN 354
+P +P+ TEL ++ + +L +Y +N +
Sbjct: 631 RALPKGIPKDVTELYLEGNHLTAVPKELSSFRHLTLIDLSNNSIGMLTNYTFSNMSHLS- 689
Query: 355 RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L N + +P +F + LR + L NDI+ +P +F + L +
Sbjct: 690 -TLILSYNRLRCIPVHSFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHL 739
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 141/294 (47%), Gaps = 57/294 (19%)
Query: 115 LNKVPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL ++ T L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 7 LQVLPELLFQSNLKLTRLDLSENQILGIPRKAFRGIADVKNLQLDNNHISCIEDGAFRAL 66
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T
Sbjct: 67 RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGPFT 126
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
C AP H++G N+ D+ + E+ C G P +P A
Sbjct: 127 LCMAPVHLRGFNVADVQKKEYVCPG------------------------PHSEPPACNAN 162
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++ IVDCR KGL ++P LPE E+
Sbjct: 163 SISCPSACTCSNNIVDCRGKGLTEIPANLPEGIVEI------------------------ 198
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF YK+L+RI + +N I+++ P AF K L +
Sbjct: 199 ------RLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 246
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 151/326 (46%), Gaps = 39/326 (11%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CHL+WL +WL++ + +C P
Sbjct: 522 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPF 581
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C + +V C +GL +P +P
Sbjct: 582 FLKEIPIQDVAIQDFTCDGNDES---SCQLGPRCPEQCTCVETVVRCSNRGLRALPKGIP 638
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISK--------------------- 162
+ TEL LE N +T +P K ++++ L IDLS N I
Sbjct: 639 KDVTELYLEGNHLTAVP-KELSSFRHLTLIDLSNNSIGMLTNYTFSNMSHLSTLILSYNR 697
Query: 163 ---VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
+ V +F GL+SL LTL+ N+++ +P+G F +L L L + N CDC L WL
Sbjct: 698 LRCIPVHSFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSE 757
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG-SSMETRSKIYREECSTDFHPYN 278
W+K + +C +P + + +L P H F+C G + +K P
Sbjct: 758 WVKAGYKEPGIARCSSPEPMADRLLLTTPTHRFQCKGPVDIGIVAKC---------DPCL 808
Query: 279 SCPVEKPTGECAAEPSCPHPCRCADG 304
S P K G C+ +P H C C G
Sbjct: 809 SSPC-KNNGTCSQDPVEGHRCACPQG 833
>gi|431918125|gb|ELK17353.1| Slit like protein 3 protein [Pteropus alecto]
Length = 1380
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 151/451 (33%), Positives = 219/451 (48%), Gaps = 76/451 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 45 TLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFTLCMAPV 104
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ D+ + E+ C GP +P A SCP C C++ IVDCR KGL ++P LP
Sbjct: 105 HLRGFNVADVQKKEYVCPGPHSEPPSCNANAISCPSACTCSNNIVDCRGKGLTEIPANLP 164
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N
Sbjct: 165 EGIVEIRLEQNSIRSIPAGAFTPYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 224
Query: 184 LT------------------------------------------------YLPDGVFAEL 195
+T + G+FA L
Sbjct: 225 ITEIAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPL 284
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N F+CDCHL WL +L+ P +C +P + + I + +F+CS
Sbjct: 285 QAIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQVKSKKFRCS 344
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
GS + RS+ +GEC + CP CRC IVDC + L +
Sbjct: 345 GSE-DYRSRF--------------------SGECFMDLVCPEKCRCEGTIVDCSNQKLAR 383
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P LPE Y+ + D + + FK+ N R L N I E+ AF
Sbjct: 384 IPSHLPE------YVADLRLNDNEISVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDG 437
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ + L N + + + F L+ +
Sbjct: 438 AAGVQELTLTGNQLEAVHGRMFRGLSGLKTL 468
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 201/471 (42%), Gaps = 96/471 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 267 SLYDNKLQTISKGLFAPLQAIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 326
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I + +F+CSG + + +GEC + CP CRC IVDC + L ++P
Sbjct: 327 RLANKRISQVKSKKFRCSGSEDYRSRFSGECFMDLVCPEKCRCEGTIVDCSNQKLARIPS 386
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVDA--------- 167
LPE +LRL N+I+ L F LR+I+LS N+I +V A D
Sbjct: 387 HLPEYVADLRLNDNEISVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAAGVQELTL 446
Query: 168 ------------FQGLKSLTS------------------------LTLNNNNLTYLPDGV 191
F+GL L + L+L +N ++ + G
Sbjct: 447 TGNQLEAVHGRMFRGLSGLKTLMLRSNLVSCVSNDTFAGLSSVRLLSLYDNRISTITPGA 506
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L T+ + N F C+CHL+WL +WL++ + +C P +K I D+ +
Sbjct: 507 FTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 566
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ + C P CP C C + +V C K
Sbjct: 567 FTCEGNDESS---------------------------CHLGPRCPEQCTCVETVVRCGNK 599
Query: 312 GLNKVPILLPEATTEL----TYMVSIDRVDKVL----LYSYISNNFKRWTNRSRR----- 358
GL +P +P TEL ++ ++ R L L +N+ TN +
Sbjct: 600 GLRALPKGIPRDVTELYLEGNHLTAVPRELSALRHLTLIDLSNNSIGVLTNYTFSNMSHL 659
Query: 359 ----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P AF + LR + L NDI LP +F++ L +
Sbjct: 660 STLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDIASLPEGSFSDLTSLSHL 710
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 133/276 (48%), Gaps = 26/276 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N ++ + G F L L T+ + N F C+CHL+WL +WL++ + +C P
Sbjct: 493 SLYDNRISTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPF 552
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C + +V C KGL +P +P
Sbjct: 553 FLKEIPIQDVAIQDFTCEGNDES---SCHLGPRCPEQCTCVETVVRCGNKGLRALPKGIP 609
Query: 124 EATTELRLEQNDITELPPK-----------------------AFANYKRLRRIDLSKNQI 160
TEL LE N +T +P + F+N L + LS N++
Sbjct: 610 RDVTELYLEGNHLTAVPRELSALRHLTLIDLSNNSIGVLTNYTFSNMSHLSTLILSYNRL 669
Query: 161 SKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW 220
+ V AF GL+SL LTL+ N++ LP+G F++L L L + N CDC L WL W
Sbjct: 670 RCIPVHAFNGLRSLRVLTLHGNDIASLPEGSFSDLTSLSHLALGTNPLHCDCSLRWLSEW 729
Query: 221 LKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
+K + +C +P + + +L P H F+C G
Sbjct: 730 VKAGYKEPGIARCSSPEPMADRLLLTTPTHRFQCKG 765
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 120/251 (47%), Gaps = 54/251 (21%)
Query: 155 LSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHL 214
L N IS + AF+ L+ L LTLNNNN++ + F + ++RTLR+ N CDCHL
Sbjct: 22 LDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHL 81
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDF 274
+WL WL++ +G +T C AP H++G N+ D+ + E+ C G
Sbjct: 82 AWLSDWLRQRRTVGQFTLCMAPVHLRGFNVADVQKKEYVCPG------------------ 123
Query: 275 HPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSID 334
P +P A SCP C C++ IVDCR KGL ++P LPE E+
Sbjct: 124 ------PHSEPPSCNANAISCPSACTCSNNIVDCRGKGLTEIPANLPEGIVEI------- 170
Query: 335 RVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPK 394
RLEQN I +P AF YK+L+RI + +N I+++ P
Sbjct: 171 -----------------------RLEQNSIRSIPAGAFTPYKKLKRIDISKNQISDIAPD 207
Query: 395 AFANYKRLRRM 405
AF K L +
Sbjct: 208 AFQGLKSLTSL 218
>gi|148684332|gb|EDL16279.1| mCG12033 [Mus musculus]
Length = 1385
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 155/451 (34%), Positives = 220/451 (48%), Gaps = 76/451 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 49 TLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFTLCMAPV 108
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G ++ D+ + E+ C GP + A SCP C C++ IVDCR KGL ++P LP
Sbjct: 109 HLRGFSVADVQKKEYVCPGPHSEAPACNANSLSCPSACSCSNNIVDCRGKGLTEIPANLP 168
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N
Sbjct: 169 EGIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 228
Query: 184 LTYLP------------------------------------------------DGVFAEL 195
+T +P G+F L
Sbjct: 229 ITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFVPL 288
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N F+CDCHL WL +L+ P +C +P + + I I +F+CS
Sbjct: 289 QSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCS 348
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
G S+ YR S+ EC + CP CRC IVDC + L +
Sbjct: 349 G------SEDYRNRFSS---------------ECFMDLVCPEKCRCEGTIVDCSNQKLAR 387
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P LPE TT+L D VL + I FK+ N R L N I E+ AF
Sbjct: 388 IPSHLPEYTTDLRLN---DNDISVLEATGI---FKKLPNLRKINLSNNRIKEVREGAFDG 441
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ + L N + + + F L+ +
Sbjct: 442 AAGVQELMLTGNQLETMHGRMFRGLSSLKTL 472
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 131/471 (27%), Positives = 207/471 (43%), Gaps = 96/471 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+F L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 271 SLYDNKLQTISKGLFVPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 330
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + + + EC + CP CRC IVDC + L ++P
Sbjct: 331 RLANKRISQIKSKKFRCSGSEDYRNRFSSECFMDLVCPEKCRCEGTIVDCSNQKLARIPS 390
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVDA--------- 167
LPE TT+LRL NDI+ L F LR+I+LS N+I +V A D
Sbjct: 391 HLPEYTTDLRLNDNDISVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELML 450
Query: 168 ------------FQGLKSLTS------------------------LTLNNNNLTYLPDGV 191
F+GL SL + L+L +N +T + G
Sbjct: 451 TGNQLETMHGRMFRGLSSLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGA 510
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L T+ + N F C+CH++WL RWL++ + +C P +K I D+ +
Sbjct: 511 FTTLVSLSTINLLSNPFNCNCHMAWLGRWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 570
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ EE S C P CP C C + +V C +
Sbjct: 571 FTCDGN----------EESS-----------------CQLSPRCPEQCTCVETVVRCSNR 603
Query: 312 GLNKVPILLPEATTEL----TYMVSIDR----VDKVLLYSYISNNFKRWTNRSRR----- 358
GL+ +P +P+ TEL ++ ++ + ++ L +N+ TN +
Sbjct: 604 GLHALPKGMPKDVTELYLEGNHLTAVPKELSAFRQLTLIDLSNNSISMLTNHTFSNMSHL 663
Query: 359 ----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P AF + LR + L NDI+ +P +F + L +
Sbjct: 664 STLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHL 714
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 133/275 (48%), Gaps = 54/275 (19%)
Query: 131 LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDG 190
L +N I +P KAF ++ + L N IS + AF+ L+ L LTLNNNN++ +
Sbjct: 2 LSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVT 61
Query: 191 VFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEH 250
F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP H++G ++ D+ +
Sbjct: 62 SFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFTLCMAPVHLRGFSVADVQKK 121
Query: 251 EFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCRE 310
E+ C G P++ P A SCP C C++ IVDCR
Sbjct: 122 EYVCPG-------------------PHSEAPACN-----ANSLSCPSACSCSNNIVDCRG 157
Query: 311 KGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPK 370
KGL ++P LPE E+ RLEQN I +P
Sbjct: 158 KGLTEIPANLPEGIVEI------------------------------RLEQNSIKSIPAG 187
Query: 371 AFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
AF YK+L+RI + +N I+++ P AF K L +
Sbjct: 188 AFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 222
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 137/277 (49%), Gaps = 28/277 (10%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CH++WL RWL++ + +C P
Sbjct: 497 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHMAWLGRWLRKRRIVSGNPRCQKPF 556
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C + +V C +GL+ +P +P
Sbjct: 557 FLKEIPIQDVAIQDFTCDGNEES---SCQLSPRCPEQCTCVETVVRCSNRGLHALPKGMP 613
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISK--------------------- 162
+ TEL LE N +T +P K + +++L IDLS N IS
Sbjct: 614 KDVTELYLEGNHLTAVP-KELSAFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNR 672
Query: 163 ---VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
+ V AF GL+SL LTL+ N+++ +P+G F +L L L + N CDC L WL
Sbjct: 673 LRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSE 732
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C +P + + +L P H F+C G
Sbjct: 733 WVKAGYKEPGIARCSSPESMADRLLLTTPTHRFQCKG 769
>gi|410040006|ref|XP_003311018.2| PREDICTED: slit homolog 3 protein [Pan troglodytes]
Length = 1589
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 156/451 (34%), Positives = 220/451 (48%), Gaps = 76/451 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 334 TLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFTLCMAPV 393
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ D+ + E+ C P +P A SCP PC C++ IVDCR KGL ++P LP
Sbjct: 394 HLRGFNVADVQKKEYVCPAPHLEPPSCNANSISCPSPCTCSNNIVDCRGKGLMEIPANLP 453
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N
Sbjct: 454 EGIVEIRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 513
Query: 184 LT------------------------------------------------YLPDGVFAEL 195
+T + G+FA L
Sbjct: 514 ITEIAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPL 573
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N F+CDCHL WL +L+ P +C +P + + I I +F+CS
Sbjct: 574 QSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCS 633
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
G S+ YR S+ EC + CP CRC IVDC + L +
Sbjct: 634 G------SEDYRSRFSS---------------ECFMDLVCPEKCRCEGTIVDCSNQKLAR 672
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P LPE T+L D VL + I FK+ N R L N I E+ AF
Sbjct: 673 IPSHLPEYVTDLRLN---DNEVSVLEATGI---FKKLPNLRKINLSNNKIKEVREGAFDG 726
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ + L N + + + F L+ +
Sbjct: 727 AASVQELMLTGNQLETVHGRVFRGLSGLKTL 757
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 142/294 (48%), Gaps = 57/294 (19%)
Query: 115 LNKVPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL ++T T L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 268 LQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRAL 327
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T
Sbjct: 328 RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFT 387
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
C AP H++G N+ D+ + E+ C +E P A
Sbjct: 388 LCMAPVHLRGFNVADVQKKEYVCPAPHLE------------------------PPSCNAN 423
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP PC C++ IVDCR KGL ++P LPE E+
Sbjct: 424 SISCPSPCTCSNNIVDCRGKGLMEIPANLPEGIVEI------------------------ 459
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF YK+L+RI + +N I+++ P AF K L +
Sbjct: 460 ------RLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 507
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 143/305 (46%), Gaps = 52/305 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 556 SLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 615
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + + + EC + CP CRC IVDC + L ++P
Sbjct: 616 RLANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLARIPS 675
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVDA--------- 167
LPE T+LRL N+++ L F LR+I+LS N+I +V A D
Sbjct: 676 HLPEYVTDLRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELML 735
Query: 168 ------------FQGLKSLTS------------------------LTLNNNNLTYLPDGV 191
F+GL L + L+L +N +T + G
Sbjct: 736 TGNQLETVHGRVFRGLSGLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGA 795
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L T+ + N F C+CHL+WL +WL++ + +C P +K I D+ +
Sbjct: 796 FTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 855
Query: 252 FKCSG 256
F C G
Sbjct: 856 FTCDG 860
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 105/253 (41%), Gaps = 61/253 (24%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CHL+WL +WL++ + +C P
Sbjct: 782 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPF 841
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G +K + + L+
Sbjct: 842 FLKEIPIQDVAIQDFTCDG-----------------------------KKAFSHLSTLI- 871
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+Y RLR I V AF GL+SL LTL+ N+
Sbjct: 872 ---------------------LSYNRLRCI----------PVHAFNGLRSLRVLTLHGND 900
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
++ +P+G F +L L L + N CDC L WL W+K + +C +P + +
Sbjct: 901 ISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSSPEPMADRL 960
Query: 244 ILDIPEHEFKCSG 256
+L P H F+C G
Sbjct: 961 LLTTPTHRFQCKG 973
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TL+ N+++ +P+G F +L L L + N CDC L WL W+K + +C +P
Sbjct: 895 TLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSSPE 954
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ + +L P H F+C GPV+
Sbjct: 955 PMADRLLLTTPTHRFQCKGPVD 976
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTY-MVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ VDC GL VP +P L +I R+ K+ +F
Sbjct: 180 ACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKM--------DFAGL 231
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R LE N ++ + AF + K+L R+RL +N + LP F + +L R+
Sbjct: 232 KNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRL 285
>gi|194219616|ref|XP_001917359.1| PREDICTED: slit homolog 3 protein [Equus caballus]
Length = 1504
Score = 254 bits (649), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 152/451 (33%), Positives = 221/451 (49%), Gaps = 76/451 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N+ CDCHL+WL WL++ +G +T C AP
Sbjct: 170 TLNNNNISRILVTSFNHMPKIRTLRLHSNNLYCDCHLAWLSDWLRQRRTIGQFTLCMAPV 229
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ D+ + E+ C GP +P A SCP C C++ IVDCR KGL ++P LP
Sbjct: 230 HLRGFNVADVQKKEYVCPGPHSEPPSCNANSISCPSSCTCSNNIVDCRGKGLTEIPANLP 289
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGL+SLTSL L N
Sbjct: 290 EGIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLRSLTSLVLYGNK 349
Query: 184 LT------------------------------------------------YLPDGVFAEL 195
+T + G+FA L
Sbjct: 350 ITEIAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPL 409
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N F+CDCHL WL +L+ P +C +P + + + I +F+CS
Sbjct: 410 QAIQTLHLAQNPFVCDCHLRWLADYLQDNPIETSGARCSSPRRLANKRLSQIKSKKFRCS 469
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
GS + RS+ + EC + CP CRC IVDC + L +
Sbjct: 470 GSE-DYRSRF--------------------SSECFMDLVCPEKCRCEGTIVDCSNQKLAR 508
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P LPE T+L D VL + + FK+ N R L N I E+ AF
Sbjct: 509 IPSHLPEYATDLRLN---DNEISVLEATGV---FKKLPNLRKINLSNNKIKEVREGAFDG 562
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ + L N + + + F L+ +
Sbjct: 563 AASVQELMLTGNQLETMHGRMFRGLSGLKTL 593
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 130/471 (27%), Positives = 204/471 (43%), Gaps = 96/471 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 392 SLYDNKLQTISKGLFAPLQAIQTLHLAQNPFVCDCHLRWLADYLQDNPIETSGARCSSPR 451
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + + I +F+CSG + + + EC + CP CRC IVDC + L ++P
Sbjct: 452 RLANKRLSQIKSKKFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLARIPS 511
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVDA--------- 167
LPE T+LRL N+I+ L F LR+I+LS N+I +V A D
Sbjct: 512 HLPEYATDLRLNDNEISVLEATGVFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELML 571
Query: 168 ------------FQGLKSLTS------------------------LTLNNNNLTYLPDGV 191
F+GL L + L+L +N +T + G
Sbjct: 572 TGNQLETMHGRMFRGLSGLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGA 631
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L T+ + N F C+CHL+WL +WL++ + +C P +K I D+ +
Sbjct: 632 FTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 691
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ EE S C P CP C C + +V C K
Sbjct: 692 FTCEGN----------EESS-----------------CQLGPRCPEQCTCVETVVRCSNK 724
Query: 312 GLNKVPILLPEATTEL----TYMVSIDRVDKVL----LYSYISNNFKRWTNRSRR----- 358
GL +P +P+ TEL ++ ++ + L L +N+ TN +
Sbjct: 725 GLRLLPKGIPKDVTELYLEGNHLTAVPKELSALRHLTLIDLSNNSIGVLTNYTFSNMSHL 784
Query: 359 ----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P AF + LR + L NDI+ +P +F + L +
Sbjct: 785 STLILSYNRLRCIPIHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHL 835
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 143/294 (48%), Gaps = 57/294 (19%)
Query: 115 LNKVPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL ++T T L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 104 LQVLPELLFQSTPKLTRLDLSENRILGIPRKAFRGIADVKNLQLDNNHISCIEDGAFRAL 163
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ + F + ++RTLR+ N+ CDCHL+WL WL++ +G +T
Sbjct: 164 RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNNLYCDCHLAWLSDWLRQRRTIGQFT 223
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
C AP H++G N+ D+ + E+ C G P +P A
Sbjct: 224 LCMAPVHLRGFNVADVQKKEYVCPG------------------------PHSEPPSCNAN 259
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++ IVDCR KGL ++P LPE E+
Sbjct: 260 SISCPSSCTCSNNIVDCRGKGLTEIPANLPEGIVEI------------------------ 295
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF YK+L+RI + +N I+++ P AF + L +
Sbjct: 296 ------RLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLRSLTSL 343
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 134/276 (48%), Gaps = 26/276 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CHL+WL +WL++ + +C P
Sbjct: 618 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPF 677
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C + +V C KGL +P +P
Sbjct: 678 FLKEIPIQDVAIQDFTCEGNEES---SCQLGPRCPEQCTCVETVVRCSNKGLRLLPKGIP 734
Query: 124 EATTELRLEQNDITELPPK-----------------------AFANYKRLRRIDLSKNQI 160
+ TEL LE N +T +P + F+N L + LS N++
Sbjct: 735 KDVTELYLEGNHLTAVPKELSALRHLTLIDLSNNSIGVLTNYTFSNMSHLSTLILSYNRL 794
Query: 161 SKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW 220
+ + AF GL+SL LTL+ N+++ +P+G F +L L L + N CDC L WL W
Sbjct: 795 RCIPIHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEW 854
Query: 221 LKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
+K + +C +P + + +L P H F+C G
Sbjct: 855 VKAGYKEPGIARCSSPEPMADRLLLTTPTHRFQCKG 890
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%)
Query: 131 LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDG 190
L++N+IT + FA K LR + L NQ+S + AFQ LK L L LN N L LP+
Sbjct: 51 LDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPEL 110
Query: 191 VFAELFRLRTLRISENSFI 209
+F +L L +SEN +
Sbjct: 111 LFQSTPKLTRLDLSENRIL 129
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%)
Query: 150 LRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ + DL +N I+++ F GLK+L L L +N ++ + G F +L +L LR+++N
Sbjct: 46 VNKGDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKL 104
>gi|24106494|dbj|BAC21665.1| SLIT1-Sb splicing product [Rattus norvegicus]
Length = 1474
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 153/458 (33%), Positives = 226/458 (49%), Gaps = 82/458 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 187 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEP-------SCPHPCRCADGIVDCREKGLN 116
++G N+ ++ + EF C+G GE A P SCP C C++GIVDCR KGL
Sbjct: 247 SLRGLNVAEVQKSEFSCTG-----QGEAAQVPACTLSSGSCPAMCSCSNGIVDCRGKGLT 301
Query: 117 KVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
+P LPE TE+RLE N I +PP AF+ Y++LRRIDLS NQI+++A DAFQGL+SL S
Sbjct: 302 AIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNS 361
Query: 177 LTLNNNNLTYLPDGVFA------------------------------------------- 193
L L N +T LP GVF
Sbjct: 362 LVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLPLLSLYDNKIQSLA 421
Query: 194 -----ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
L ++TL +++N F DC+L WL +L+ P +C +P + + I I
Sbjct: 422 KGTFTSLRAIQTLHLAQNPFTWDCNLKWLADFLRTNPIETTGARCASPRRLANKRIGQIK 481
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+F+CS Y + D+H NS EC ++ +CPH CRC +V+C
Sbjct: 482 SKKFRCSAKEQ------YFIPGTEDYH-LNS--------ECTSDVACPHKCRCEASVVEC 526
Query: 309 REKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITEL 367
L+K+P +P++TTEL + I ++ L+ +S+ K L N ++E+
Sbjct: 527 SGLKLSKIPERIPQSTTELRLNNNEISILEATGLFKKLSHLKK------INLSNNKVSEI 580
Query: 368 PPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + + L N + + F LR +
Sbjct: 581 EDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTL 618
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 143/282 (50%), Gaps = 52/282 (18%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+A + L L +N + +P KAF L+ + L KNQIS + AF+ L+ L LTLNNNN
Sbjct: 133 QALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNN 192
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+ ++G N
Sbjct: 193 ITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLN 252
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
+ ++ + EF C+G + +C + + SCP C C++
Sbjct: 253 VAEVQKSEFSCTGQGEAAQVP--------------ACTL--------SSGSCPAMCSCSN 290
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQND 363
GIVDCR KGL +P LPE TE+ RLE N
Sbjct: 291 GIVDCRGKGLTAIPANLPETMTEI------------------------------RLELNG 320
Query: 364 ITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I +PP AF+ Y++LRRI L N I E+ P AF + L +
Sbjct: 321 IKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSL 362
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 118/451 (26%), Positives = 186/451 (41%), Gaps = 91/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N F DC+L WL +L+ P +C +P
Sbjct: 411 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFTWDCNLKWLADFLRTNPIETTGARCASPR 470
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + EC ++ +CPH CRC +V+C
Sbjct: 471 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYHLNSECTSDVACPHKCRCEASVVECSGLK 530
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L+K+P +P++TTELRL N+I+ L F L++I+LS N++S++ F+G
Sbjct: 531 LSKIPERIPQSTTELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATS 590
Query: 171 ---------------------LKSLTSLTLNN------------------------NNLT 185
L L +L L N N++T
Sbjct: 591 VSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHIT 650
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
G F L L TL + N F C+C L+WL WL++ + +C P ++ +
Sbjct: 651 TTSPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPDLLRQIPLQ 710
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E C P CP C C D +
Sbjct: 711 DVAFPDFRCEEGQEEV--------------------------GCLPRPQCPQECTCLDTV 744
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L +P +P+ TEL +D L+ +S FK + L N I+
Sbjct: 745 VRCSNKHLQALPKGIPKNVTELY----LDGNQFTLVPGQLS-TFKYL--QLVDLSNNKIS 797
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L +F N +L + L N + +PP AF
Sbjct: 798 SLSNSSFTNMSQLTTLILSYNALQCIPPLAF 828
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 134/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N++T G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 643 SLYDNHITTTSPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPD 702
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ C P CP C C D +V C K L +P +P
Sbjct: 703 LLRQIPLQDVAFPDFRCEEGQEEVG--CLPRPQCPQECTCLDTVVRCSNKHLQALPKGIP 760
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN--- 180
+ TEL L+ N T L P + +K L+ +DLS N+IS ++ +F + LT+L L+
Sbjct: 761 KNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 819
Query: 181 ---------------------NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
N+++ L +G+FA++ L L I N CDCHL WL
Sbjct: 820 LQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSS 879
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 880 WVKTGYKEPGIARCAGPPEMEGKLLLTTPAKKFECQG 916
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 57/113 (50%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDC GL +P +P T L L N+IT + FA K+LR + L
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQL 92
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+NQI V AF +K L L LN N L LP+ +F L L +SENS
Sbjct: 93 MENQIGAVERGAFDDVKELERLRLNRNQLQVLPELLFQNNQALSRLDLSENSL 145
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C VDC GL +P +P T L + I R+ K N+F
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHK--------NDFAGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I + AF + K L R+RL +N + LP F N + L R+
Sbjct: 85 KQLRVLQLMENQIGAVERGAFDDVKELERLRLNRNQLQVLPELLFQNNQALSRL 138
>gi|126291429|ref|XP_001380309.1| PREDICTED: slit homolog 3 protein [Monodelphis domestica]
Length = 1524
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 152/451 (33%), Positives = 220/451 (48%), Gaps = 76/451 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ +P F + ++RTLR+ N CDC L+WL WL++ +G +T C AP
Sbjct: 188 TLNNNNISRIPVTSFNHMPKIRTLRLHSNHLYCDCSLAWLSDWLRQRRSIGQFTLCMAPV 247
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G ++ D+ + E+ C+GP +P +CP C C++ IVDCR KGL ++P LP
Sbjct: 248 HLRGFSVADVQKKEYVCTGPHSEPPSCSVNSIACPSSCTCSNNIVDCRGKGLTEIPANLP 307
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N
Sbjct: 308 EGIVEIRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 367
Query: 184 LT------------------------------------------------YLPDGVFAEL 195
+T + G+FA L
Sbjct: 368 ITEISKGLFDGLVSLQLLLLNANKINCLRVNTFQDLHNLHLLSLYDNKLQTISKGLFAPL 427
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N F+CDCHL WL +L+ P +C +P + + I I +F+CS
Sbjct: 428 QSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCS 487
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
G S+ YR K +G+C + CP CRC IVDC + L +
Sbjct: 488 G------SEDYR---------------NKFSGDCFMDLVCPEKCRCEGTIVDCSNQKLVR 526
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P +PE T+L D VL + I FK+ N R L N I E+ F
Sbjct: 527 IPSHIPEYVTDLRLN---DNEISVLEATGI---FKKLPNLRKINLSNNKIKEVREGVFDG 580
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ + L N + + + F L+ M
Sbjct: 581 AVNVQELMLTGNQLELVHGRMFRGLTSLKTM 611
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 127/473 (26%), Positives = 205/473 (43%), Gaps = 100/473 (21%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 410 SLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 469
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K +G+C + CP CRC IVDC + L ++P
Sbjct: 470 RLANKRISQIKSKKFRCSGSEDYRNKFSGDCFMDLVCPEKCRCEGTIVDCSNQKLVRIPS 529
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV-------AVDA----- 167
+PE T+LRL N+I+ L F LR+I+LS N+I +V AV+
Sbjct: 530 HIPEYVTDLRLNDNEISVLEATGIFKKLPNLRKINLSNNKIKEVREGVFDGAVNVQELML 589
Query: 168 ------------FQGLKSLTS------------------------LTLNNNNLTYLPDGV 191
F+GL SL + L+L +N ++ + G
Sbjct: 590 TGNQLELVHGRMFRGLTSLKTMMLRSNLISCVSNDTFAGLSSVRLLSLYDNRISTITPGA 649
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
FA L L T+ + N F C+CHL+WL +WL++ + +C P +K I D+ +
Sbjct: 650 FATLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 709
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ + C P CP C C + +V C K
Sbjct: 710 FTCDGNDESS---------------------------CQLAPRCPEQCTCVETVVRCSNK 742
Query: 312 GLNKVPILLPEATTEL-------------------TYMVSIDRVDKVLLYSYISNNFKRW 352
GL +P +P+ TEL ++ + +L +Y +N +
Sbjct: 743 GLRVLPKGIPKDVTELYLEGNHLTTVPKELSTLRHLTLIDLSNNSISVLANYTFSNMTQL 802
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L N + +P AF + LR + L NDI+ +P +F + L +
Sbjct: 803 S--TLILSYNQLRCIPIHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHL 853
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 96/294 (32%), Positives = 142/294 (48%), Gaps = 57/294 (19%)
Query: 115 LNKVPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL + T T L L +N I +P KAF ++ + L NQIS + AF+ L
Sbjct: 122 LQVLPELLFQNTLKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNQISCIEDGAFRAL 181
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ +P F + ++RTLR+ N CDC L+WL WL++ +G +T
Sbjct: 182 RDLEILTLNNNNISRIPVTSFNHMPKIRTLRLHSNHLYCDCSLAWLSDWLRQRRSIGQFT 241
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
C AP H++G ++ D+ + E+ C+G P +P
Sbjct: 242 LCMAPVHLRGFSVADVQKKEYVCTG------------------------PHSEPPSCSVN 277
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
+CP C C++ IVDCR KGL ++P LPE E+
Sbjct: 278 SIACPSSCTCSNNIVDCRGKGLTEIPANLPEGIVEI------------------------ 313
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF YK+L+RI + +N I+++ P AF K L +
Sbjct: 314 ------RLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 361
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/276 (32%), Positives = 137/276 (49%), Gaps = 26/276 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N ++ + G FA L L T+ + N F C+CHL+WL +WL++ + +C P
Sbjct: 636 SLYDNRISTITPGAFATLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPF 695
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C + +V C KGL +P +P
Sbjct: 696 FLKEIPIQDVAIQDFTCDGNDES---SCQLAPRCPEQCTCVETVVRCSNKGLRVLPKGIP 752
Query: 124 EATTELRLEQNDITELPPK-----------------------AFANYKRLRRIDLSKNQI 160
+ TEL LE N +T +P + F+N +L + LS NQ+
Sbjct: 753 KDVTELYLEGNHLTTVPKELSTLRHLTLIDLSNNSISVLANYTFSNMTQLSTLILSYNQL 812
Query: 161 SKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW 220
+ + AF GL+SL LTL+ N+++ +P+G F +L L L + N CDC L WL W
Sbjct: 813 RCIPIHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEW 872
Query: 221 LKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
+K + +C +P H+ + +L P H F+C G
Sbjct: 873 VKAGYKEPGIARCSSPDHMADRLLLTTPTHRFQCKG 908
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ VDC GL VP +P L +D+ + +F
Sbjct: 34 ACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLD-------LDRNNITRITKTDFAGLK 86
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R LE+N ++ + AF + K+L R+RL +N + LP F N +L R+
Sbjct: 87 NLRVLHLEENQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQNTLKLTRL 139
>gi|410975780|ref|XP_003994307.1| PREDICTED: slit homolog 1 protein [Felis catus]
Length = 1534
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 152/456 (33%), Positives = 226/456 (49%), Gaps = 78/456 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 187 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEKP-TGECA-AEPSCPHPCRCADGIVDCREKGLNKVPIL 121
++G N+ ++ + EF CSG E C + SCP C C++GIVDCR KGL +P
Sbjct: 247 SLRGLNVAEVQKSEFSCSGQGEAGRVPSCTLSSGSCPAMCTCSNGIVDCRGKGLTAIPAN 306
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
LPE+ TE+RLE N I +PP AF+ Y++LRRIDLS NQI+++A DAFQGL+SL SL L
Sbjct: 307 LPESMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYG 366
Query: 182 NNLTYLPDGVFA------------------------------------------------ 193
N +T LP GVF
Sbjct: 367 NKITDLPRGVFGGLYTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQSLAKGTFT 426
Query: 194 ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFK 253
L ++TL +++N FICDC+L L +L+ P +C +P + + I I +F+
Sbjct: 427 SLRAIQTLHLAQNPFICDCNLKGLADFLRTNPIETSGARCASPRRLANKRIGQIKSKKFR 486
Query: 254 CSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL 313
CS + + + T+ + NS EC ++ CPH CRC +V+C L
Sbjct: 487 CS-----AKEQYFIP--GTEDYQLNS--------ECNSDVVCPHKCRCEASLVECSSLKL 531
Query: 314 NKVPILLPEATTEL---TYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPP 369
K+P +P++T EL +SI + FK+ T+ + L N ++E+
Sbjct: 532 TKIPERIPQSTAELRLNNNEISILEATGI---------FKKLTHLKKINLSNNKVSEIED 582
Query: 370 KAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
AF + + L N + + F LR +
Sbjct: 583 GAFEGAGSVSELHLTANQLESIRSGMFRGLDGLRTL 618
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 102/282 (36%), Positives = 144/282 (51%), Gaps = 52/282 (18%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+A + L L +N I +P KAF L+ + L KNQIS + AF+ L+ L LTLNNNN
Sbjct: 133 QALSRLDLSENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNN 192
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+ ++G N
Sbjct: 193 ITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLN 252
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
+ ++ + EF CSG R SC + + SCP C C++
Sbjct: 253 VAEVQKSEFSCSGQGEAGRVP--------------SCTL--------SSGSCPAMCTCSN 290
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQND 363
GIVDCR KGL +P LPE+ TE+ RLE N
Sbjct: 291 GIVDCRGKGLTAIPANLPESMTEI------------------------------RLELNG 320
Query: 364 ITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I +PP AF+ Y++LRRI L N I E+ P AF + L +
Sbjct: 321 IKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSL 362
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 188/451 (41%), Gaps = 91/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L L +L+ P +C +P
Sbjct: 411 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKGLADFLRTNPIETSGARCASPR 470
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + EC ++ CPH CRC +V+C
Sbjct: 471 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVVCPHKCRCEASLVECSSLK 530
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L K+P +P++T ELRL N+I+ L F L++I+LS N++S++ AF+G
Sbjct: 531 LTKIPERIPQSTAELRLNNNEISILEATGIFKKLTHLKKINLSNNKVSEIEDGAFEGAGS 590
Query: 171 ---------------------LKSLTSLTLNNNNLTYLPD-------------------- 189
L L +L L NN ++ + +
Sbjct: 591 VSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIA 650
Query: 190 ----GVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
G F L L TL + N F C+C L+WL WL+R + +C P ++ +
Sbjct: 651 TISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRRRKIVTGNPRCQNPDFLRQIPLQ 710
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E G C P CP C C D +
Sbjct: 711 DVAFPDFRCEEGQEE--------------------------GGCLPRPQCPQECACLDTV 744
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L +P +P+ TEL +D L+ +S FK + L N I+
Sbjct: 745 VRCSNKHLQVLPKGIPKNVTELY----LDGNQFTLVPGQLS-TFKYL--QLVDLSNNKIS 797
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L +F N +L + L N + +PP AF
Sbjct: 798 SLSNSSFTNMSQLTTLILSYNALQCIPPLAF 828
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + + G F L L TL + N F C+C L+WL WL+R + +C P
Sbjct: 643 SLYDNQIATISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRRRKIVTGNPRCQNPD 702
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ G C P CP C C D +V C K L +P +P
Sbjct: 703 FLRQIPLQDVAFPDFRCEEGQEE--GGCLPRPQCPQECACLDTVVRCSNKHLQVLPKGIP 760
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN--- 180
+ TEL L+ N T L P + +K L+ +DLS N+IS ++ +F + LT+L L+
Sbjct: 761 KNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 819
Query: 181 ---------------------NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
N+++ L +G+F ++ L L I N CDCHL WL
Sbjct: 820 LQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFTDVTSLSHLAIGANPLYCDCHLRWLSG 879
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 880 WVKTGYKEPGIARCAGPPDMEGKLLLTTPAKKFECQG 916
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 56/113 (49%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDC GL +P +P T L L N+IT + F K+LR + L
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFVGLKQLRVLQL 92
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+NQI V AF +K L L LN N + LP+ +F L L +SEN+
Sbjct: 93 MENQIGVVERGAFDDMKELERLRLNRNQVHSLPELLFQNNQALSRLDLSENTI 145
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%)
Query: 6 NNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHI 65
+ N+++ L +G+F ++ L L I N CDCHL WL W+K + +C P +
Sbjct: 840 HGNDISTLQEGIFTDVTSLSHLAIGANPLYCDCHLRWLSGWVKTGYKEPGIARCAGPPDM 899
Query: 66 KGQNILDIPEHEFKCSGP 83
+G+ +L P +F+C GP
Sbjct: 900 EGKLLLTTPAKKFECQGP 917
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C VDC GL +P +P T L + I R+ K N+F
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHK--------NDFVGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I + AF + K L R+RL +N + LP F N + L R+
Sbjct: 85 KQLRVLQLMENQIGVVERGAFDDMKELERLRLNRNQVHSLPELLFQNNQALSRL 138
>gi|395501810|ref|XP_003755283.1| PREDICTED: slit homolog 1 protein [Sarcophilus harrisii]
Length = 1482
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 153/461 (33%), Positives = 224/461 (48%), Gaps = 88/461 (19%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 134 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 193
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEP-------SCPHPCRCADGIVDCREKGLN 116
++ N+ ++ + EF CSG GE P SCP C C++GIVDCR KGL
Sbjct: 194 SLRSLNVAEVQKSEFSCSG-----QGEATRSPVCTLSLGSCPPMCACSNGIVDCRGKGLT 248
Query: 117 KVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
+P LPE TE+RLE N I +PP AF+ Y++LRRIDLS NQIS++A DAFQGL+SL S
Sbjct: 249 AIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNS 308
Query: 177 LTLNNNNLTYLPDGVF--------------------AELFR------------------- 197
L L N +T LP GVF A+ F+
Sbjct: 309 LVLYGNKITDLPKGVFGGLYTLQLLLLNANKINCIRADAFQDLQNLSLLSLYDNKIQSLA 368
Query: 198 ---------LRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
++TL +++N FICDC+L WL +L+ P +C +P + + I I
Sbjct: 369 KGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANKRIGQIK 428
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+F+CS Y + D+ + EC ++ CPH CRC +V+C
Sbjct: 429 SKKFRCSAKEQ------YFLPGTEDY---------RLNSECNSDAVCPHKCRCESNVVEC 473
Query: 309 REKGLNKVPILLPEATTEL---TYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDI 364
L K+P +P++T EL +SI + FK+ + + L N +
Sbjct: 474 SNLKLTKIPERIPQSTAELRLNNNEISILEATGI---------FKKLPHLKKINLSNNKV 524
Query: 365 TELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+E+ AF + + L N + + F LR +
Sbjct: 525 SEIEDGAFEGAASVSELHLTVNQLESIRSGMFRGLDGLRTL 565
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 102/282 (36%), Positives = 144/282 (51%), Gaps = 52/282 (18%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+A + L L +N I +P KAF L+ + L KNQIS + AF+ L+ L LTLNNNN
Sbjct: 80 QALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEDGAFRALRGLEVLTLNNNN 139
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+ ++ N
Sbjct: 140 ITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRSLN 199
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
+ ++ + EF CSG TRS + C+ SCP C C++
Sbjct: 200 VAEVQKSEFSCSGQGEATRSPV----CTLSLG------------------SCPPMCACSN 237
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQND 363
GIVDCR KGL +P LPE TE+ RLE N
Sbjct: 238 GIVDCRGKGLTAIPANLPETMTEI------------------------------RLELNG 267
Query: 364 ITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I +PP AF+ Y++LRRI L N I+E+ P AF + L +
Sbjct: 268 IKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSL 309
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 189/451 (41%), Gaps = 91/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 358 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPR 417
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + EC ++ CPH CRC +V+C
Sbjct: 418 RLANKRIGQIKSKKFRCSAKEQYFLPGTEDYRLNSECNSDAVCPHKCRCESNVVECSNLK 477
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L K+P +P++T ELRL N+I+ L F L++I+LS N++S++ AF+G
Sbjct: 478 LTKIPERIPQSTAELRLNNNEISILEATGIFKKLPHLKKINLSNNKVSEIEDGAFEGAAS 537
Query: 171 ---------------------LKSLTSLTLNNNNLTYLPD-------------------- 189
L L +L L NN ++ + +
Sbjct: 538 VSELHLTVNQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIS 597
Query: 190 ----GVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
G F L L TL + N F C+C L+WL WL++ + +C P ++ +
Sbjct: 598 TISPGAFDTLQSLSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQ 657
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E G C P CP C C D +
Sbjct: 658 DVAFPDFRCEEGQEE--------------------------GGCFPRPQCPQECTCLDTV 691
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L +P +P+ TEL +D L+ + +S FK + L N I
Sbjct: 692 VRCSNKHLRGLPKGIPKNVTELY----LDGNQFTLVPAQLS-TFKYL--QLVDLSNNKIG 744
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L +F N +L + L N + +PP AF
Sbjct: 745 SLSNSSFTNMSQLTTLILSYNSLQCIPPLAF 775
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 151/326 (46%), Gaps = 38/326 (11%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N ++ + G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 590 SLYDNQISTISPGAFDTLQSLSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPD 649
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ G C P CP C C D +V C K L +P +P
Sbjct: 650 FLRQIPLQDVAFPDFRCEEGQEE--GGCFPRPQCPQECTCLDTVVRCSNKHLRGLPKGIP 707
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TEL L+ N T L P + +K L+ +DLS N+I ++ +F + LT+L L+ N+
Sbjct: 708 KNVTELYLDGNQFT-LVPAQLSTFKYLQLVDLSNNKIGSLSNSSFTNMSQLTTLILSYNS 766
Query: 184 LTYLP------------------------DGVFAELFRLRTLRISENSFICDCHLSWLHR 219
L +P +G+F ++ L L I N C+CHL WL
Sbjct: 767 LQCIPPLAFEGLRSLRLLSLHGNDISTLREGIFTDVTSLSHLAIGANPLYCNCHLRWLSS 826
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG-SSMETRSKIYREECSTDFHPYN 278
W+K + +C P ++G+ +L P +F+C G S+ ++K +P
Sbjct: 827 WVKTGYKEPGIARCAGPPDMEGKLLLTTPAKKFECQGPPSITVQAKC---------NPCL 877
Query: 279 SCPVEKPTGECAAEPSCPHPCRCADG 304
S P + G C +P + C C G
Sbjct: 878 SNPCQN-QGTCQNDPLDSYRCTCPSG 902
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
EA L N+IT + FA K+LR + L +NQI V AF ++ L L LN N+
Sbjct: 8 EAFVGWELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMRDLERLRLNRNH 67
Query: 184 LTYLPDGVFAELFRLRTLRISENSF 208
L LP+ +F L L +SEN+
Sbjct: 68 LHLLPELLFQNNQALSRLDLSENAI 92
>gi|328707772|ref|XP_003243498.1| PREDICTED: protein slit-like [Acyrthosiphon pisum]
Length = 1452
Score = 251 bits (642), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 153/448 (34%), Positives = 227/448 (50%), Gaps = 85/448 (18%)
Query: 14 PDGVFAELFRLRTLRISENSFICDCHLSWLHR-WLKRYPRLGLYTKCFAPSHIKGQNILD 72
P G+F++L+RLR +R+S+N F CDC L WL++ WL R PRLG T C+ PS++ G + D
Sbjct: 195 PSGLFSDLYRLRNIRLSDNKFQCDCKLEWLYQQWLPRIPRLGSSTHCYGPSNMAGLPLAD 254
Query: 73 IPEHEFKCSGPVEKPTGECA-----AEPSCPHPCRCADG-IVDCREKGLNKVPILLPEAT 126
+ +H +C G + T EC + SCPHPC C +G IV+CREK L KVP LPE
Sbjct: 255 MHKHHMQCDGDFDGETVECGPGVEDQKSSCPHPCSCEEGGIVNCREKSLTKVPTKLPEDI 314
Query: 127 TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLT----------- 175
ELRLEQN ITE+ PKAF YKRLRRIDLSKNQI+K++VDAFQGLKSLT
Sbjct: 315 VELRLEQNQITEILPKAFVKYKRLRRIDLSKNQITKISVDAFQGLKSLTSLMLYGNKIKD 374
Query: 176 -------------S------------------------LTLNNNNLTYLPDGVFAELFRL 198
L+L +NN+ L +G F + +
Sbjct: 375 LPGGVFHGLTSLQLLLLNANEISCIRRDAFRDLHSVNLLSLYDNNIKSLANGTFDYMRSI 434
Query: 199 RTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSS 258
+TL + N F CDC+L WL +L + P +C +P ++ + I + +FKC +
Sbjct: 435 QTLHLGRNPFSCDCNLRWLSEYLHKNPIETSAARCESPKKLQKRRIDGLSHDKFKCLDDN 494
Query: 259 METRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 318
M+++ T +C ++ CP C C +VDC + L ++P
Sbjct: 495 MKSK-----------------------TTDCFSDVPCPSNCSCDGTVVDCSGRSLTEIPK 531
Query: 319 LLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPPKAFANYKR 377
+P TTEL +++ + + K+ F R + + +++N I+ + AF +
Sbjct: 532 DIPIYTTEL--LLNDNEIGKI----KSDGLFGRLPHLQKLEMKRNIISSVEANAFEGAIK 585
Query: 378 LRRIRLEQNDITELPPKAFANYKRLRRM 405
L + L +N I ++ K F L+ +
Sbjct: 586 LYELNLSENKIRQVHNKMFIGLHNLKML 613
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 199/446 (44%), Gaps = 71/446 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +NN+ L +G F + ++TL + N F CDC+L WL +L + P +C +P
Sbjct: 414 SLYDNNIKSLANGTFDYMRSIQTLHLGRNPFSCDCNLRWLSEYLHKNPIETSAARCESPK 473
Query: 64 HIKGQNILDIPEHEFKC-SGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILL 122
++ + I + +FKC ++ T +C ++ CP C C +VDC + L ++P +
Sbjct: 474 KLQKRRIDGLSHDKFKCLDDNMKSKTTDCFSDVPCPSNCSCDGTVVDCSGRSLTEIPKDI 533
Query: 123 PEATTELRLEQNDI-------------------------TELPPKAFANYKRLRRIDLSK 157
P TTEL L N+I + + AF +L ++LS+
Sbjct: 534 PIYTTELLLNDNEIGKIKSDGLFGRLPHLQKLEMKRNIISSVEANAFEGAIKLYELNLSE 593
Query: 158 NQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWL 217
N+I +V F GL +L LTL NN +T + G F L LRTL + N F C+CHL+W
Sbjct: 594 NKIRQVHNKMFIGLHNLKMLTLLNNEITCVMPGSFDYLPALRTLNLQMNPFNCNCHLAWF 653
Query: 218 HRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPY 277
WLK++ + +C P+ + I D+P +EFKCSG + +
Sbjct: 654 AEWLKKHGLIAGSPRCAGPARVMDVPIHDLPSYEFKCSGDNDQG---------------- 697
Query: 278 NSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS----- 332
C + CP C C +V C L ++P +P T+EL V+
Sbjct: 698 -----------CLGDNYCPPKCTCIGTVVRCTRAKLVEIPKNIPVETSELYLDVNEITSI 746
Query: 333 -IDRVD--KVLLYSYISNN---------FKRWTNRSR-RLEQNDITELPPKAFANYKRLR 379
+DR++ K L +SNN F + + S L N + L + + K LR
Sbjct: 747 KVDRLNHLKSLTRLDLSNNHLIVLSNNTFSQLSKLSTLLLGYNKLQCLEKNSLSGLKSLR 806
Query: 380 RIRLEQNDITELPPKAFANYKRLRRM 405
I L N+I+ +P F+ + +
Sbjct: 807 IISLHGNNISLIPDGTFSGLDSITHL 832
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 121/383 (31%), Positives = 162/383 (42%), Gaps = 123/383 (32%)
Query: 97 CPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR----- 151
CP C C DC KGL++VP LP L L+ N+IT + FAN LR
Sbjct: 32 CPWLCSCDQTTADCSRKGLDEVPKNLPSDIERLDLQGNNITVISSTDFANLTNLRVLQLS 91
Query: 152 -------------------------------------------RIDLSKNQISKVAVDAF 168
R+DLS N++ V
Sbjct: 92 DNQIHTIEKGAFKHLGRLERLRLNGNELSEVPDLVFYNNLQLSRLDLSHNRLLFVGKSML 151
Query: 169 QGLKSLTSLTLNNNNLTYL------------------------PDGVFAELFRLRTLRIS 204
+G ++L +L ++NN L + P G+F++L+RLR +R+S
Sbjct: 152 KGAQALRTLLMDNNRLLCIDEHAIKGLKDLEILTLNNNNLTTLPSGLFSDLYRLRNIRLS 211
Query: 205 ENSFICDCHLSWLH-RWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+N F CDC L WL+ +WL R PRLG T C+ PS++ G + D+ +H +C G
Sbjct: 212 DNKFQCDCKLEWLYQQWLPRIPRLGSSTHCYGPSNMAGLPLADMHKHHMQCDGD------ 265
Query: 264 KIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD-GIVDCREKGLNKVPILLPE 322
++ VE G + SCPHPC C + GIV+CREK L KVP LPE
Sbjct: 266 -------------FDGETVECGPGVEDQKSSCPHPCSCEEGGIVNCREKSLTKVPTKLPE 312
Query: 323 ATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIR 382
EL RLEQN ITE+ PKAF YKRLRRI
Sbjct: 313 DIVEL------------------------------RLEQNQITEILPKAFVKYKRLRRID 342
Query: 383 LEQNDITELPPKAFANYKRLRRM 405
L +N IT++ AF K L +
Sbjct: 343 LSKNQITKISVDAFQGLKSLTSL 365
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 155/325 (47%), Gaps = 36/325 (11%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TL NN +T + G F L LRTL + N F C+CHL+W WLK++ + +C P+
Sbjct: 614 TLLNNEITCVMPGSFDYLPALRTLNLQMNPFNCNCHLAWFAEWLKKHGLIAGSPRCAGPA 673
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+ I D+P +EFKCSG ++ C + CP C C +V C L ++P +P
Sbjct: 674 RVMDVPIHDLPSYEFKCSGDNDQG---CLGDNYCPPKCTCIGTVVRCTRAKLVEIPKNIP 730
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKN-----------QISKVAV------- 165
T+EL L+ N+IT + + K L R+DLS N Q+SK++
Sbjct: 731 VETSELYLDVNEITSIKVDRLNHLKSLTRLDLSNNHLIVLSNNTFSQLSKLSTLLLGYNK 790
Query: 166 ------DAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
++ GLKSL ++L+ NN++ +PDG F+ L + L I N CDC L WL
Sbjct: 791 LQCLEKNSLSGLKSLRIISLHGNNISLIPDGTFSGLDSITHLGIGSNPLYCDCGLQWLAE 850
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
W+K+ +C P+ +K + +L P F C E K +C+T F N
Sbjct: 851 WIKKDFIESGIARCAEPNSMKDKLLLSTPVSSFVCK----EPIGKDILSKCNTCF--TNP 904
Query: 280 CPVEKPTGECAAEPSCPHPCRCADG 304
C E G C P + CRC G
Sbjct: 905 CSNE---GFCEPLPERQYKCRCNPG 926
>gi|395841490|ref|XP_003793568.1| PREDICTED: slit homolog 2 protein [Otolemur garnettii]
Length = 1518
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 148/430 (34%), Positives = 218/430 (50%), Gaps = 47/430 (10%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPS---CPHPCRCADGIVDCREKGLNKVPI 120
H++G N+ ++ + EF CS E A S CP C C++ IVDCR KGL ++P
Sbjct: 241 HLRGHNVAEVQKREFVCSDEEEGHQSFVAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPT 300
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVA---------------- 164
LPE TE+RLEQN I +PP AF+ YK+LRR+ L N+I+++
Sbjct: 301 NLPETITEIRLEQNSIKVIPPGAFSPYKKLRRMVLYGNKITELPKSLFEGLFSLQLLLLN 360
Query: 165 --------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSW 216
VDAFQ L +L L+L +N L + G F+ L ++T+ +++N FICDCHL W
Sbjct: 361 ANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKW 420
Query: 217 LHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHP 276
L +L P +C +P + + I I +F+CS F P
Sbjct: 421 LADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSAKEQY-------------FIP 467
Query: 277 YNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRV 336
K +G+C A+ +CP CRC VDC + LNK+P +P+ T EL ++
Sbjct: 468 GTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPDHIPQYTAEL----RLNNN 523
Query: 337 DKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKA 395
+ +L + + FK+ R N I ++ AF + I L N + + K
Sbjct: 524 EFTVLEA--TGIFKKLPQLRKINFSNNKIADIEEGAFEGASGVNEILLTSNRLESVRHKM 581
Query: 396 FANYKRLRRM 405
F + L+ +
Sbjct: 582 FKGLESLKTL 591
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 135/463 (29%), Positives = 202/463 (43%), Gaps = 95/463 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 382 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 441
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K +G+C A+ +CP CRC VDC
Sbjct: 442 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSN 501
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLS--------------- 156
+ LNK+P +P+ T ELRL N+ T L F +LR+I+ S
Sbjct: 502 QKLNKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKIADIEEGAFEGA 561
Query: 157 ---------------------------------KNQISKVAVDAFQGLKSLTSLTLNNNN 183
NQIS VA D+F GL S+ L+L +N
Sbjct: 562 SGVNEILLTSNRLESVRHKMFKGLESLKTLMLRSNQISCVANDSFIGLSSVRLLSLYDNQ 621
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N F C+C+L+WL WL++ + +C P +K
Sbjct: 622 ITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIP 681
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCA 302
I D+ +F C D + NSC P+ + CP C C
Sbjct: 682 IQDVAIQDFTCD-----------------DGNDDNSCSPLSR----------CPTECTCL 714
Query: 303 DGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQN 362
D +V C KGL +P +P+ TEL +D L+ +S N+K T L N
Sbjct: 715 DTVVRCSNKGLKVLPKGIPKDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNN 767
Query: 363 DITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I+ L ++F+N +L + L N + LPP+ F K LR +
Sbjct: 768 RISTLSNQSFSNMTQLLTLILSYNRLRCLPPRTFDGLKSLRLL 810
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/285 (37%), Positives = 142/285 (49%), Gaps = 54/285 (18%)
Query: 115 LNKVPILLPEATTEL---RLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L P LL T++L L +N I +P KAF ++ + L NQIS + AF+ L
Sbjct: 115 LQLFPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRAL 174
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT
Sbjct: 175 RDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYT 234
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C PSH++G N+ ++ + EF CS E CS H
Sbjct: 235 QCMGPSHLRGHNVAEVQKREFVCSDEE-EGHQSFVAPSCSV-LH---------------- 276
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
CP C C++ IVDCR KGL ++P LPE TE+
Sbjct: 277 ---CPAACTCSNNIVDCRGKGLTEIPTNLPETITEI------------------------ 309
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
RLEQN I +PP AF+ YK+LRR+ L N ITELP F
Sbjct: 310 ------RLEQNSIKVIPPGAFSPYKKLRRMVLYGNKITELPKSLF 348
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 134/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 616 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 675
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 676 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPTECTCLDTVVRCSNKGLKVLPKGIP 733
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
+ TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 734 KDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 792
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 793 LRCLPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 852
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 853 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 889
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT L FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRLTKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQ LK L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRLDLSENQI 139
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 50/125 (40%), Gaps = 24/125 (19%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNF 349
A +CP C C+ VDC L VP +P T +R+D NN
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNT---------ERLD------LNGNNI 67
Query: 350 KRWTN---------RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYK 400
R T R +L +N I+ + AF + K L R+RL +N + P F
Sbjct: 68 TRLTKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTS 127
Query: 401 RLRRM 405
+L R+
Sbjct: 128 KLYRL 132
>gi|17380582|gb|AAK31796.1| SLIT1 isoform B [Homo sapiens]
Length = 798
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 154/464 (33%), Positives = 229/464 (49%), Gaps = 84/464 (18%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 170 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 229
Query: 64 HIKGQNILDIPEHEFKCSGPVEK---PTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
++G N+ ++ + EF CSG E PT ++ SCP C C++GIVDCR KGL +P
Sbjct: 230 SLRGLNVAEVQKSEFSCSGQGEAGRVPTCTLSSG-SCPAMCTCSNGIVDCRGKGLTAIPA 288
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRI----------DLSKNQISKVAVDAFQG 170
LPE TE+RLE N I +PP AF+ Y++LRRI DLS NQI+++A DAFQG
Sbjct: 289 NLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIRPLSFCSPCRDLSNNQIAEIAPDAFQG 348
Query: 171 LKSLTSLTLNNNNLTYLPDGVFA------------------------------------- 193
L+SL SL L N +T LP GVF
Sbjct: 349 LRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDN 408
Query: 194 -----------ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQ 242
L ++TL +++N FICDC+L WL +L+ P +C +P + +
Sbjct: 409 KIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANK 468
Query: 243 NILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCA 302
I I +F+CS Y + D+ NS EC ++ CPH CRC
Sbjct: 469 RIGQIKSKKFRCSAKEQ------YFIPGTEDYQ-LNS--------ECNSDVVCPHKCRCE 513
Query: 303 DGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQ 361
+V+C L K+P +P++T EL ++ + +L + + FK+ T+ + L
Sbjct: 514 ANVVECSSLKLTKIPERIPQSTAEL----RLNNNEISILEA--TGMFKKLTHLKKINLSN 567
Query: 362 NDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N ++E+ AF + + L N + + F LR +
Sbjct: 568 NKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTL 611
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/292 (34%), Positives = 144/292 (49%), Gaps = 62/292 (21%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+A + L L +N I +P KAF L+ + L KNQIS + AF+ L+ L LTLNNNN
Sbjct: 116 QALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNN 175
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+ ++G N
Sbjct: 176 ITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLN 235
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
+ ++ + EF CSG R +C + + SCP C C++
Sbjct: 236 VAEVQKSEFSCSGQGEAGRVP--------------TCTL--------SSGSCPAMCTCSN 273
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQND 363
GIVDCR KGL +P LPE TE+ RLE N
Sbjct: 274 GIVDCRGKGLTAIPANLPETMTEI------------------------------RLELNG 303
Query: 364 ITELPPKAFANYKRLRRIR----------LEQNDITELPPKAFANYKRLRRM 405
I +PP AF+ Y++LRRIR L N I E+ P AF + L +
Sbjct: 304 IKSIPPGAFSPYRKLRRIRPLSFCSPCRDLSNNQIAEIAPDAFQGLRSLNSL 355
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 180/451 (39%), Gaps = 115/451 (25%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 404 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPR 463
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + EC ++ CPH CRC +V+C
Sbjct: 464 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVVCPHKCRCEANVVECSSLK 523
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L K+P +P++T ELRL N+I+ L F L++I+LS N++S++ AF+G
Sbjct: 524 LTKIPERIPQSTAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAAS 583
Query: 171 ---------------------LKSLTSLTLNN------------------------NNLT 185
L L +L L N N +T
Sbjct: 584 VSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIT 643
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+C L+WL WL++ + +C P ++ +
Sbjct: 644 TVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWLRKRKIVTGNPRCQNPDFLRQIPLQ 703
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E G C P CP C C D +
Sbjct: 704 DVAFPDFRCEEGQEE--------------------------GGCLPRPQCPQECACLDTV 737
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L +P +P+ TEL L+ N T
Sbjct: 738 VRCSNKHLRALPKGIPKNVTELY------------------------------LDGNQFT 767
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L P + +K L+ + L N + +PP AF
Sbjct: 768 -LVPGQLSTFKYLQLVILSYNALQCIPPLAF 797
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 57/113 (50%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDC GL +P +P T L L N+IT + FA K+LR + L
Sbjct: 16 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQL 75
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+NQI V AF +K L L LN N L LP+ +F L L +SEN+
Sbjct: 76 MENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAI 128
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C VDC GL +P +P T L + I R+ K N+F
Sbjct: 16 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHK--------NDFAGL 67
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I + AF + K L R+RL +N + LP F N + L R+
Sbjct: 68 KQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRL 121
>gi|145587673|ref|NP_571811.2| slit homolog 3 protein precursor [Danio rerio]
gi|141796343|gb|AAI39488.1| Slit (Drosophila) homolog 3 [Danio rerio]
Length = 1515
Score = 250 bits (639), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 153/452 (33%), Positives = 223/452 (49%), Gaps = 77/452 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRTLR+ N+ CDCHLSWL WL++ L +T+C AP+
Sbjct: 177 TLNNNNITLIPLSSFNHMPKLRTLRLHSNNLHCDCHLSWLSDWLRQRRGLAPFTQCMAPA 236
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPS-CPHPCRCADGIVDCREKGLNKVPILL 122
H++G N+ D+ + EF C+GPVE CA + + CP C C + IVDCR KGL ++P L
Sbjct: 237 HMRGLNVPDVQKREFVCTGPVETEPRSCAPQATICPAACTCNNNIVDCRRKGLTEIPANL 296
Query: 123 PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLT------- 175
PE E+RLEQN I +P AF+ YK+L+RIDLSKNQIS++A DAF GL+SLT
Sbjct: 297 PEGIVEIRLEQNMIKNIPAGAFSTYKKLKRIDLSKNQISEIAEDAFSGLRSLTSLVLYGN 356
Query: 176 -----------------S------------------------LTLNNNNLTYLPDGVFAE 194
L+L +N L + G+FA
Sbjct: 357 KIAEIPKGLFDGLVSLQLLLLNANKINCLRVNTFKDLQNLNLLSLYDNKLQTISKGLFAP 416
Query: 195 LFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
L ++TL +++N F+CDCHL WL +L P +C P + + I + +F+C
Sbjct: 417 LRAIKTLHLAQNPFMCDCHLKWLADYLFDNPIETSGARCSHPRRLANKRISQVKGKKFRC 476
Query: 255 SGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLN 314
+G+ + RS++ +GEC + CP CRC +VDC L
Sbjct: 477 TGAE-DYRSRL--------------------SGECFQDLVCPERCRCEGTVVDCSNLKLT 515
Query: 315 KVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFA 373
K+P LPE TT+L D + + FK+ N R L N + ++ AF
Sbjct: 516 KIPPHLPEHTTDLRLN------DNEISILEATGAFKKLPNLRKINLSNNKLRDIREGAFD 569
Query: 374 NYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L N + + + F L+ +
Sbjct: 570 GAGGVLELLLTGNKLQSVSGRMFKGLIGLKTL 601
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 135/456 (29%), Positives = 201/456 (44%), Gaps = 89/456 (19%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L P +C P
Sbjct: 400 SLYDNKLQTISKGLFAPLRAIKTLHLAQNPFMCDCHLKWLADYLFDNPIETSGARCSHPR 459
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I + +F+C+G + + +GEC + CP CRC +VDC L K+P
Sbjct: 460 RLANKRISQVKGKKFRCTGAEDYRSRLSGECFQDLVCPERCRCEGTVVDCSNLKLTKIPP 519
Query: 121 LLPEATTELRLEQNDITEL-PPKAFANYKRLRRIDLS----------------------- 156
LPE TT+LRL N+I+ L AF LR+I+LS
Sbjct: 520 HLPEHTTDLRLNDNEISILEATGAFKKLPNLRKINLSNNKLRDIREGAFDGAGGVLELLL 579
Query: 157 -------------------------KNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGV 191
NQIS V F GL S+ L+L +N ++ + G
Sbjct: 580 TGNKLQSVSGRMFKGLIGLKTLMLRSNQISCVDNATFTGLSSVRLLSLYDNRISTIAPGA 639
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L T+ + N ++CDCHL+WL WLK+ + +C P+ +K I D+ +
Sbjct: 640 FNTLHSLSTINLLSNPYVCDCHLAWLGLWLKKTRVVSGNPRCQKPAFLKEIPIQDVAMPD 699
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ EE N C + P CP C C++ +V C +
Sbjct: 700 FSCDGA----------EE--------NVC--------LPSAPRCPESCTCSETVVRCSNR 733
Query: 312 GLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISN--NFKRWTNRSRRLEQNDITELPP 369
GL +P +P+ TTEL ++ LL S N K+ T L N I+ L P
Sbjct: 734 GLRSLPKAIPKDTTEL-------YLEGNLLTSVPKELPNLKQLT--LLDLSNNSISHLAP 784
Query: 370 KAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F+N +L + L N I +P AF + LR +
Sbjct: 785 LTFSNMTQLATLILSYNQIRCVPVHAFDGLRSLRLL 820
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/295 (35%), Positives = 149/295 (50%), Gaps = 58/295 (19%)
Query: 115 LNKVPILLPEATTELR---LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL ++TT+L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 111 LQVLPELLFQSTTKLSRLDLSENQIQAVPRKAFRGITTVKNLQLDSNHISCIEDGAFRAL 170
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T +P F + +LRTLR+ N+ CDCHLSWL WL++ L +T
Sbjct: 171 RDLEILTLNNNNITLIPLSSFNHMPKLRTLRLHSNNLHCDCHLSWLSDWLRQRRGLAPFT 230
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C AP+H++G N+ D+ + EF C+G PVE CA
Sbjct: 231 QCMAPAHMRGLNVPDVQKREFVCTG------------------------PVETEPRSCAP 266
Query: 292 EPS-CPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFK 350
+ + CP C C + IVDCR KGL ++P LPE E+
Sbjct: 267 QATICPAACTCNNNIVDCRRKGLTEIPANLPEGIVEI----------------------- 303
Query: 351 RWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF+ YK+L+RI L +N I+E+ AF+ + L +
Sbjct: 304 -------RLEQNMIKNIPAGAFSTYKKLKRIDLSKNQISEIAEDAFSGLRSLTSL 351
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 137/276 (49%), Gaps = 25/276 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N ++ + G F L L T+ + N ++CDCHL+WL WLK+ + +C P+
Sbjct: 626 SLYDNRISTIAPGAFNTLHSLSTINLLSNPYVCDCHLAWLGLWLKKTRVVSGNPRCQKPA 685
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E + P CP C C++ +V C +GL +P +P
Sbjct: 686 FLKEIPIQDVAMPDFSCDGAEENVC--LPSAPRCPESCTCSETVVRCSNRGLRSLPKAIP 743
Query: 124 EATTELRLEQNDITELP-----------------------PKAFANYKRLRRIDLSKNQI 160
+ TTEL LE N +T +P P F+N +L + LS NQI
Sbjct: 744 KDTTELYLEGNLLTSVPKELPNLKQLTLLDLSNNSISHLAPLTFSNMTQLATLILSYNQI 803
Query: 161 SKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW 220
V V AF GL+SL LTL+ N+L+ +P+G F L L L + N CDC L WL +W
Sbjct: 804 RCVPVHAFDGLRSLRLLTLHGNDLSTVPEGAFNHLTSLSHLALGANPLYCDCELRWLSQW 863
Query: 221 LKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
+K + +C P + + +L P + F+C G
Sbjct: 864 VKAGFKEPGIARCTGPPDMADRLLLTTPLNRFQCKG 899
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 10/117 (8%)
Query: 291 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTY-MVSIDRVDKVLLYSYISNNF 349
A CPH C C+ VDC+ + VP +P L +I R+ KV +F
Sbjct: 20 AVNGCPHKCSCSGSHVDCQGQAFKTVPRGIPRNAERLDLDRNNITRITKV--------DF 71
Query: 350 KRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R LE N I+ + AF K+L RIRL +N + LP F + +L R+
Sbjct: 72 SGLKNLRVLHLENNQISVIERGAFEGLKQLERIRLNRNRLQVLPELLFQSTTKLSRL 128
>gi|260817802|ref|XP_002603774.1| hypothetical protein BRAFLDRAFT_86604 [Branchiostoma floridae]
gi|229289097|gb|EEN59785.1| hypothetical protein BRAFLDRAFT_86604 [Branchiostoma floridae]
Length = 2313
Score = 250 bits (639), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 164/474 (34%), Positives = 225/474 (47%), Gaps = 98/474 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLN+NNLT L G ++ +LRT RI+ N ICDCHLSWL WL+ PRLGL+T+C AP+
Sbjct: 1352 TLNSNNLTTLSPGTIGQMPKLRTFRIANNELICDCHLSWLAEWLRMRPRLGLFTRCAAPA 1411
Query: 64 HIKGQNILDIPEHE-----------------------------------------FKCSG 82
+ ++ ++ +E F S
Sbjct: 1412 LLSNVHVAELQRNEFLCNDMTVTTGQQHHTDLWDPQELKYSETVVLGRELLPLLGFSYSV 1471
Query: 83 PVEKPTG---------ECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQ 133
+ TG EC CP C CA GIVDCR+KGL +P +P TELRLEQ
Sbjct: 1472 VCTELTGFGVEDHLPKECVVNEMCPELCSCAGGIVDCRDKGLLGIPNDIPATATELRLEQ 1531
Query: 134 NDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNN----------- 182
N I +P KAFA YK+LRRIDLS NQIS +A DAF+GL +L SL LN N
Sbjct: 1532 NQIRSIPSKAFAQYKKLRRIDLSNNQISDIAPDAFEGLDTLNSLLLNANRISCIQTDAFK 1591
Query: 183 -----NLTYLPD--------GVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGL 229
NL L D G F L ++TL +++N F+CDC+L WL ++L+ P
Sbjct: 1592 DLHSLNLLSLYDNRIEMISKGTFDPLRNIQTLHLAQNPFMCDCNLRWLAQYLQDNPIETS 1651
Query: 230 YTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGEC 289
+C P + + I I H+F+C S E R + V K +G+C
Sbjct: 1652 GARCVMPRRLSRKRISQIKVHKFRC--SMREARENV---------------GVRKGSGQC 1694
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNF 349
+ CP C C +VDC + L+ VP ++P TEL ++ + + KV + S F
Sbjct: 1695 KVDDDCPDRCICEGTVVDCTNRKLDSVPDVIPSYATEL--LLGENEIVKV----HASGIF 1748
Query: 350 KRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
K+ N R L N I E+ AF + + L N I+ + P AF + + L
Sbjct: 1749 KKLPNLRKIDLRNNKIVEIEDDAFIGADGVTELSLYDNRISTVQPGAFDSLRSL 1802
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/427 (30%), Positives = 204/427 (47%), Gaps = 53/427 (12%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + + G F L ++TL +++N F+CDC+L WL ++L+ P +C P
Sbjct: 1600 SLYDNRIEMISKGTFDPLRNIQTLHLAQNPFMCDCNLRWLAQYLQDNPIETSGARCVMPR 1659
Query: 64 HIKGQNILDIPEHEFKCSG-------PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLN 116
+ + I I H+F+CS V K +G+C + CP C C +VDC + L+
Sbjct: 1660 RLSRKRISQIKVHKFRCSMREARENVGVRKGSGQCKVDDDCPDRCICEGTVVDCTNRKLD 1719
Query: 117 KVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQGLKSLT 175
VP ++P TEL L +N+I ++ F LR+IDL N+I ++ DAF G +T
Sbjct: 1720 SVPDVIPSYATELLLGENEIVKVHASGIFKKLPNLRKIDLRNNKIVEIEDDAFIGADGVT 1779
Query: 176 SLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFA 235
L+L +N ++ + G F L L TL + N F C+CHL+WL WL+ + +C+
Sbjct: 1780 ELSLYDNRISTVQPGAFDSLRSLATLNLLSNPFNCNCHLAWLSEWLRTKRVVTGNPRCYK 1839
Query: 236 PSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPS 294
PS+++ I DI +FKC D NSC P+
Sbjct: 1840 PSYLREIPIQDIAVQDFKC------------------DMDDENSCVPISH---------- 1871
Query: 295 CPHPCRCADGIVDCREKGLNKVPILLPEATTE-------------LTYMVSIDRVD-KVL 340
CP C C +V C + L + P +P A TE L+++ + R+D
Sbjct: 1872 CPEMCTCTGTVVRCSRQNLTQFPKDIPRAVTELYLDMNQINIIPNLSHLKHLTRLDLSNN 1931
Query: 341 LYSYISNN-FKRWTNRSRR-LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFAN 398
+ S ISN+ T S L N++ + PKAFA K LR + L N ++ +P +AF +
Sbjct: 1932 MISKISNHAIANLTQLSTLILSYNNLRCISPKAFAGLKALRILSLHGNQLSTIPQEAFKD 1991
Query: 399 YKRLRRM 405
+ L +
Sbjct: 1992 LQSLSHI 1998
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 104/307 (33%), Positives = 143/307 (46%), Gaps = 56/307 (18%)
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL 184
+T E+ L +L N + LR DLS N I V F+G + +LTLN+NNL
Sbjct: 1299 STGEVVLTFRSRLKLNLSGTTNSRHLRVCDLSHNHIQVVTKKTFKGANKMKNLTLNSNNL 1358
Query: 185 TYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNI 244
T L G ++ +LRT RI+ N ICDCHLSWL WL+ PRLGL+T+C AP+ + ++
Sbjct: 1359 TTLSPGTIGQMPKLRTFRIANNELICDCHLSWLAEWLRMRPRLGLFTRCAAPALLSNVHV 1418
Query: 245 LDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPV-----------------EKPTG 287
++ +EF C+ ++ T + + + Y+ V + TG
Sbjct: 1419 AELQRNEFLCNDMTVTTGQQHHTDLWDPQELKYSETVVLGRELLPLLGFSYSVVCTELTG 1478
Query: 288 ---------ECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDK 338
EC CP C CA GIVDCR+KGL +P +P TEL
Sbjct: 1479 FGVEDHLPKECVVNEMCPELCSCAGGIVDCRDKGLLGIPNDIPATATEL----------- 1527
Query: 339 VLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFAN 398
RLEQN I +P KAFA YK+LRRI L N I+++ P AF
Sbjct: 1528 -------------------RLEQNQIRSIPSKAFAQYKKLRRIDLSNNQISDIAPDAFEG 1568
Query: 399 YKRLRRM 405
L +
Sbjct: 1569 LDTLNSL 1575
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 132/288 (45%), Gaps = 32/288 (11%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N ++ + G F L L TL + N F C+CHL+WL WL+ + +C+ PS
Sbjct: 1782 SLYDNRISTVQPGAFDSLRSLATLNLLSNPFNCNCHLAWLSEWLRTKRVVTGNPRCYKPS 1841
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+++ I DI +FKC E C CP C C +V C + L + P +P
Sbjct: 1842 YLREIPIQDIAVQDFKCDMDDEN---SCVPISHCPEMCTCTGTVVRCSRQNLTQFPKDIP 1898
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVA------------------- 164
A TEL L+ N I +P ++ K L R+DLS N ISK++
Sbjct: 1899 RAVTELYLDMNQINIIP--NLSHLKHLTRLDLSNNMISKISNHAIANLTQLSTLILSYNN 1956
Query: 165 -----VDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
AF GLK+L L+L+ N L+ +P F +L L + + N CDCHL WL
Sbjct: 1957 LRCISPKAFAGLKALRILSLHGNQLSTIPQEAFKDLQSLSHIALGANPLYCDCHLVWLSD 2016
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQN-ILDIPEHEFKCS--GSSMETRSK 264
W+K+ KC P H +L P F CS G +E +K
Sbjct: 2017 WVKKDFIEPGIAKCAGPKHTMADKLLLTAPSRNFVCSEEGPDVEILAK 2064
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 45/106 (42%), Gaps = 24/106 (22%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
SCP C C +DC +GL VP +P T RI L
Sbjct: 1016 SCPKQCSCPGNSLDCGNRGLRAVPKGIPRNT------------------------ERIQL 1051
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTL 201
NQIS + AFQ L SL L LN N L LPD +F+ + R+ L
Sbjct: 1052 LNNQISTIEKGAFQDLVSLERLRLNGNVLKSLPDLLFSNMPRIYRL 1097
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 42/112 (37%), Gaps = 30/112 (26%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
SCP C C +DC +GL VP +P T +
Sbjct: 1016 SCPKQCSCPGNSLDCGNRGLRAVPKGIPRNTERI-------------------------- 1049
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+L N I+ + AF + L R+RL N + LP F+N R+ R+
Sbjct: 1050 ----QLLNNQISTIEKGAFQDLVSLERLRLNGNVLKSLPDLLFSNMPRIYRL 1097
>gi|11526769|gb|AAG36772.1|AF210320_1 Slit3 [Danio rerio]
gi|165993297|emb|CAP71963.1| slit3 [Danio rerio]
Length = 1515
Score = 250 bits (639), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 153/452 (33%), Positives = 223/452 (49%), Gaps = 77/452 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRTLR+ N+ CDCHLSWL WL++ L +T+C AP+
Sbjct: 177 TLNNNNITLIPLSSFNHMPKLRTLRLHSNNLHCDCHLSWLSDWLRQRRGLAPFTQCMAPA 236
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPS-CPHPCRCADGIVDCREKGLNKVPILL 122
H++G N+ D+ + EF C+GPVE CA + + CP C C + IVDCR KGL ++P L
Sbjct: 237 HMRGLNVPDVQKREFVCTGPVETEPRSCAPQATICPAACTCNNNIVDCRRKGLTEIPANL 296
Query: 123 PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLT------- 175
PE E+RLEQN I +P AF+ YK+L+RIDLSKNQIS++A DAF GL+SLT
Sbjct: 297 PEGIVEIRLEQNMIKNIPAGAFSTYKKLKRIDLSKNQISEIAEDAFSGLRSLTSLVLYGN 356
Query: 176 -----------------S------------------------LTLNNNNLTYLPDGVFAE 194
L+L +N L + G+FA
Sbjct: 357 KIAEIPKGLFDGLVSLQLLLLNANKINCLRVNTFKDLQNLNLLSLYDNKLQTISKGLFAP 416
Query: 195 LFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
L ++TL +++N F+CDCHL WL +L P +C P + + I + +F+C
Sbjct: 417 LRAIKTLHLAQNPFMCDCHLKWLADYLFDNPIETSGARCSHPRRLANKRISQVKGKKFRC 476
Query: 255 SGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLN 314
+G+ + RS++ +GEC + CP CRC +VDC L
Sbjct: 477 TGAE-DYRSRL--------------------SGECFQDLVCPERCRCEGTVVDCSNLKLT 515
Query: 315 KVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFA 373
K+P LPE TT+L D + + FK+ N R L N + ++ AF
Sbjct: 516 KIPPHLPEHTTDLRLN------DNEISILEATGAFKKLPNLRKINLSNNKLRDIREGAFD 569
Query: 374 NYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L N + + + F L+ +
Sbjct: 570 GAGGVLELLLTGNKLQSVSGRMFKGLIGLKTL 601
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 136/456 (29%), Positives = 202/456 (44%), Gaps = 89/456 (19%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L P +C P
Sbjct: 400 SLYDNKLQTISKGLFAPLRAIKTLHLAQNPFMCDCHLKWLADYLFDNPIETSGARCSHPR 459
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I + +F+C+G + + +GEC + CP CRC +VDC L K+P
Sbjct: 460 RLANKRISQVKGKKFRCTGAEDYRSRLSGECFQDLVCPERCRCEGTVVDCSNLKLTKIPP 519
Query: 121 LLPEATTELRLEQNDITEL-PPKAFANYKRLRRIDLS----------------------- 156
LPE TT+LRL N+I+ L AF LR+I+LS
Sbjct: 520 HLPEHTTDLRLNDNEISILEATGAFKKLPNLRKINLSNNKLRDIREGAFDGAGGVLELLL 579
Query: 157 -------------------------KNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGV 191
NQIS V F GL S+ L+L++N ++ + G
Sbjct: 580 TGNKLQSVSGRMFKGLIGLKTLMLRSNQISCVDNATFTGLSSVRLLSLHDNRISTIAPGA 639
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L T+ + N ++CDCHL+WL WLK+ + +C P+ +K I D+ E
Sbjct: 640 FNTLHSLSTINLLSNPYVCDCHLAWLGLWLKKTRVVSGNPRCQKPAFLKEIPIQDVAMPE 699
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ EE N C + P CP C C++ +V C +
Sbjct: 700 FSCDGA----------EE--------NVC--------LPSAPRCPESCTCSETVVRCSNR 733
Query: 312 GLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISN--NFKRWTNRSRRLEQNDITELPP 369
GL +P +P+ TTEL ++ LL S N K+ T L N I+ L P
Sbjct: 734 GLRSLPKAIPKDTTEL-------YLEGNLLTSVPKELPNLKQLT--LLDLSNNSISHLAP 784
Query: 370 KAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F+N +L + L N I +P AF + LR +
Sbjct: 785 LTFSNMTQLATLILSYNQIRCVPVHAFDGLRSLRLL 820
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/295 (35%), Positives = 149/295 (50%), Gaps = 58/295 (19%)
Query: 115 LNKVPILLPEATTELR---LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL ++TT+L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 111 LQVLPELLFQSTTKLSRLDLSENQIQAVPRKAFRGITTVKNLQLDSNHISCIEDGAFRAL 170
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T +P F + +LRTLR+ N+ CDCHLSWL WL++ L +T
Sbjct: 171 RDLEILTLNNNNITLIPLSSFNHMPKLRTLRLHSNNLHCDCHLSWLSDWLRQRRGLAPFT 230
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C AP+H++G N+ D+ + EF C+G PVE CA
Sbjct: 231 QCMAPAHMRGLNVPDVQKREFVCTG------------------------PVETEPRSCAP 266
Query: 292 EPS-CPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFK 350
+ + CP C C + IVDCR KGL ++P LPE E+
Sbjct: 267 QATICPAACTCNNNIVDCRRKGLTEIPANLPEGIVEI----------------------- 303
Query: 351 RWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF+ YK+L+RI L +N I+E+ AF+ + L +
Sbjct: 304 -------RLEQNMIKNIPAGAFSTYKKLKRIDLSKNQISEIAEDAFSGLRSLTSL 351
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 138/276 (50%), Gaps = 25/276 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L++N ++ + G F L L T+ + N ++CDCHL+WL WLK+ + +C P+
Sbjct: 626 SLHDNRISTIAPGAFNTLHSLSTINLLSNPYVCDCHLAWLGLWLKKTRVVSGNPRCQKPA 685
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ EF C G E + P CP C C++ +V C +GL +P +P
Sbjct: 686 FLKEIPIQDVAMPEFSCDGAEENVC--LPSAPRCPESCTCSETVVRCSNRGLRSLPKAIP 743
Query: 124 EATTELRLEQNDITELP-----------------------PKAFANYKRLRRIDLSKNQI 160
+ TTEL LE N +T +P P F+N +L + LS NQI
Sbjct: 744 KDTTELYLEGNLLTSVPKELPNLKQLTLLDLSNNSISHLAPLTFSNMTQLATLILSYNQI 803
Query: 161 SKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW 220
V V AF GL+SL LTL+ N+L+ +P+G F L L L + N CDC L WL +W
Sbjct: 804 RCVPVHAFDGLRSLRLLTLHGNDLSTVPEGAFNHLTSLSHLALGANPLYCDCELRWLSQW 863
Query: 221 LKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
+K + +C P + + +L P + F+C G
Sbjct: 864 VKAGFKEPGIARCTGPPDMADRLLLTTPLNRFQCKG 899
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 10/117 (8%)
Query: 291 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTY-MVSIDRVDKVLLYSYISNNF 349
A CPH C C+ VDC+ + VP +P L +I R+ KV +F
Sbjct: 20 AVNGCPHKCSCSGSHVDCQGQAFKTVPRGIPRNAERLDLDRNNITRITKV--------DF 71
Query: 350 KRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R LE N I+ + AF K+L RIRL +N + LP F + +L R+
Sbjct: 72 SGLKNLRVLHLENNQISVIERGAFEGLKQLERIRLNRNRLQVLPELLFQSTTKLSRL 128
>gi|449267252|gb|EMC78218.1| Slit like protein 3 protein, partial [Columba livia]
Length = 1335
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 151/451 (33%), Positives = 225/451 (49%), Gaps = 76/451 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 1 TLNNNNITRIPVTSFNHMPKIRTLRLHSNVLHCDCHLAWLSDWLRQRRTIGQFTFCLAPV 60
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+++G + ++ + +F CSG +P A+ +CP C C++ +VDCR +GL ++P LP
Sbjct: 61 NLRGFLVAEVQKKDFVCSGSPSEPPSCSASSITCPSACTCSNNVVDCRGRGLTEIPANLP 120
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +PP AF YK+L+RID+SKNQIS +A DAF+GLKSL SL L N
Sbjct: 121 EDIWEIRLEQNLIKVIPPGAFTQYKKLKRIDISKNQISDIAPDAFKGLKSLISLVLYGNK 180
Query: 184 LTYLPD------------------------------------------------GVFAEL 195
+T +P G+FA L
Sbjct: 181 ITEIPQGLFDDLVSLQLLLLNANKINCLRVNTFQGLHNLKLLSLYDNKLQTISKGLFAPL 240
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N F+CDCHL WL +L+ P +C P + + I I +F+CS
Sbjct: 241 RSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSNPRRLANKRISQIKSKKFRCS 300
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
GS + RSK TG+C + CP CRC IVDC + L +
Sbjct: 301 GSE-DYRSKF--------------------TGKCFMDLVCPEKCRCEGTIVDCSNQKLTR 339
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P LPE TT+L ++ D +L + + FK+ N R L N I E+ F
Sbjct: 340 LPAHLPEYTTDL----RLNDNDISVLEA--TGLFKKLPNLRKINLSNNKIKEIREGTFDG 393
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ + L +N + + + F L+ +
Sbjct: 394 ASGVQELILTENQLESVHGRMFRGLTGLKTL 424
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 201/473 (42%), Gaps = 103/473 (21%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C P
Sbjct: 223 SLYDNKLQTISKGLFAPLRSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSNPR 282
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K TG+C + CP CRC IVDC + L ++P
Sbjct: 283 RLANKRISQIKSKKFRCSGSEDYRSKFTGKCFMDLVCPEKCRCEGTIVDCSNQKLTRLPA 342
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLS----------------------- 156
LPE TT+LRL NDI+ L F LR+I+LS
Sbjct: 343 HLPEYTTDLRLNDNDISVLEATGLFKKLPNLRKINLSNNKIKEIREGTFDGASGVQELIL 402
Query: 157 -KNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPD------------------------GV 191
+NQ+ V F+GL L +L L +N+++ + + G
Sbjct: 403 TENQLESVHGRMFRGLTGLKTLMLRSNSISCINNDTFAGLSSVRLLSLYDNHISTITPGA 462
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F+ L L T+ + NSF C+CHL+WL +WL++ + +C P +K I D+ +
Sbjct: 463 FSTLVSLSTINLLANSFNCNCHLAWLGKWLRKKRIVSGNPRCLKPFFLKDIPIQDVDVQD 522
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ + C P CP C C D +V C K
Sbjct: 523 FTCDGNDESS---------------------------CLLSPPCPSQCTCVDSVVRCSNK 555
Query: 312 GLNKVPILLPEATTEL-------------------TYMVSIDRVDKVLLYSYISNNFKRW 352
GL +P +P+ TEL ++ + +L +Y +N +
Sbjct: 556 GLRILPKGIPKDVTELYLEGNHLTAVPKGLSAFRHLTLIDLSNNSISVLANYTFSNMTQL 615
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ RL +P AF + LR + L NDI+ +P +F + L +
Sbjct: 616 STLYNRLRC-----IPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLISLSHL 663
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 93/272 (34%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N+++ + G F+ L L T+ + NSF C+CHL+WL +WL++ + +C P
Sbjct: 449 SLYDNHISTITPGAFSTLVSLSTINLLANSFNCNCHLAWLGKWLRKKRIVSGNPRCLKPF 508
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C D +V C KGL +P +P
Sbjct: 509 FLKDIPIQDVDVQDFTCDGNDES---SCLLSPPCPSQCTCVDSVVRCSNKGLRILPKGIP 565
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVA------------------- 164
+ TEL LE N +T +P K + ++ L IDLS N IS +A
Sbjct: 566 KDVTELYLEGNHLTAVP-KGLSAFRHLTLIDLSNNSISVLANYTFSNMTQLSTLYNRLRC 624
Query: 165 --VDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK 222
V AF GL+SL LTL+ N+++ +P+G F +L L L + N CDCHL WL W+K
Sbjct: 625 IPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLISLSHLALGTNPLHCDCHLRWLSEWVK 684
Query: 223 RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
+ +C P + + +L P H F+C
Sbjct: 685 AGYKEPGIARCSGPDAMGDRLLLTTPTHHFQC 716
>gi|291387794|ref|XP_002710414.1| PREDICTED: slit homolog 3 [Oryctolagus cuniculus]
Length = 1523
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 153/451 (33%), Positives = 218/451 (48%), Gaps = 76/451 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 187 TLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFTLCMAPV 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ D+ + E+ C P +P A +CP C C++ IVDCR KGL ++P LP
Sbjct: 247 HLRGFNVADVQKKEYVCPVPHSEPPSCNANSLACPSACTCSNNIVDCRAKGLTEIPTNLP 306
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N
Sbjct: 307 EGIIEIRLEQNSIKSIPAGAFTPYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 366
Query: 184 LT------------------------------------------------YLPDGVFAEL 195
+T + G+FA L
Sbjct: 367 ITEIAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPL 426
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N F+CDCHL WL +L+ P +C +P + + I I +F+CS
Sbjct: 427 QSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCS 486
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
G S+ YR S+ EC + CP CRC IVDC + L +
Sbjct: 487 G------SEDYRNRFSS---------------ECFMDLVCPEKCRCEGTIVDCSNQKLAR 525
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P LPE T+L D VL + I FK+ N R L N I E+ F
Sbjct: 526 IPSHLPEYVTDLRLN---DNEISVLEATGI---FKKLPNLRKINLSNNKIKEMREGVFDG 579
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ + L N + + + F L+ +
Sbjct: 580 AASVQELMLTGNQLESVHGRMFRGLTGLKTL 610
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 127/471 (26%), Positives = 199/471 (42%), Gaps = 96/471 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 409 SLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 468
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + + + EC + CP CRC IVDC + L ++P
Sbjct: 469 RLANKRISQIKSKKFRCSGSEDYRNRFSSECFMDLVCPEKCRCEGTIVDCSNQKLARIPS 528
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKN--------------------- 158
LPE T+LRL N+I+ L F LR+I+LS N
Sbjct: 529 HLPEYVTDLRLNDNEISVLEATGIFKKLPNLRKINLSNNKIKEMREGVFDGAASVQELML 588
Query: 159 ---QISKVAVDAFQGLKSLTS------------------------LTLNNNNLTYLPDGV 191
Q+ V F+GL L + L+L +N +T + G
Sbjct: 589 TGNQLESVHGRMFRGLTGLKTLMLRSNLISCVGNDTFAGLSAVRLLSLYDNRITTITPGA 648
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L T+ + N F C+CHL+WL +WL++ + +C P +K I D+ +
Sbjct: 649 FTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 708
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ + C P CP C C + +V C K
Sbjct: 709 FTCEGNDESS---------------------------CQLSPRCPEQCTCVETVVRCSNK 741
Query: 312 GLNKVPILLPEATTEL----TYMVSIDRVDKVL----LYSYISNNFKRWTNRSRR----- 358
GL +P +P+ TEL ++ ++ R L L +N+ TN +
Sbjct: 742 GLRALPKGMPKDVTELYLEGNHLTAVPRELSALRHLTLIDLSNNSIGMLTNYTFSNMSHL 801
Query: 359 ----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P AF + LR + L NDI+ +P +F + L +
Sbjct: 802 STLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHL 852
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 140/294 (47%), Gaps = 57/294 (19%)
Query: 115 LNKVPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL ++ T L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 121 LQVLPELLFQSNPKLTRLDLSENQIQGVPRKAFRGIADVKNLQLDNNHISCIEDGAFRAL 180
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T
Sbjct: 181 RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFT 240
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
C AP H++G N+ D+ + E+ C P +P A
Sbjct: 241 LCMAPVHLRGFNVADVQKKEYVC------------------------PVPHSEPPSCNAN 276
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
+CP C C++ IVDCR KGL ++P LPE E+
Sbjct: 277 SLACPSACTCSNNIVDCRAKGLTEIPTNLPEGIIEI------------------------ 312
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF YK+L+RI + +N I+++ P AF K L +
Sbjct: 313 ------RLEQNSIKSIPAGAFTPYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 360
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 134/276 (48%), Gaps = 26/276 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CHL+WL +WL++ + +C P
Sbjct: 635 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPF 694
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C + +V C KGL +P +P
Sbjct: 695 FLKEIPIQDVAIQDFTCEGNDES---SCQLSPRCPEQCTCVETVVRCSNKGLRALPKGMP 751
Query: 124 EATTELRLEQNDITELPPK-----------------------AFANYKRLRRIDLSKNQI 160
+ TEL LE N +T +P + F+N L + LS N++
Sbjct: 752 KDVTELYLEGNHLTAVPRELSALRHLTLIDLSNNSIGMLTNYTFSNMSHLSTLILSYNRL 811
Query: 161 SKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW 220
+ V AF GL+SL LTL+ N+++ +P+G F +L L L + N CDC L WL W
Sbjct: 812 RCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEW 871
Query: 221 LKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
+K + +C +P + + +L P H F+C G
Sbjct: 872 VKAGYKEPGIARCSSPESMADRLLLTTPTHRFQCKG 907
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TL+ N+++ +P+G F +L L L + N CDC L WL W+K + +C +P
Sbjct: 829 TLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSSPE 888
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ + +L P H F+C GPV+
Sbjct: 889 SMADRLLLTTPTHRFQCKGPVD 910
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTY-MVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ VDC GL VP +P L +I R+ K+ +F
Sbjct: 33 ACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKM--------DFAGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R LE N ++ + AF + K+L R+RL +N + LP F + +L R+
Sbjct: 85 KNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSNPKLTRL 138
>gi|344240197|gb|EGV96300.1| Slit-like 3 protein [Cricetulus griseus]
Length = 566
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 159/471 (33%), Positives = 221/471 (46%), Gaps = 100/471 (21%)
Query: 5 LNNNNLTYLPDGVFAELF------------------------RLRTLRISENSFICDCHL 40
L+NN+++ + DG F L ++RTLR+ N CDCHL
Sbjct: 21 LDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHL 80
Query: 41 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHP 100
+WL WL++ +G +T C AP H++G N+ D+ + E+ C GP + A SCP
Sbjct: 81 AWLSDWLRQRRTVGQFTLCMAPVHLRGFNVADVQKKEYVCPGPHAEAPSCNANSLSCPSA 140
Query: 101 CRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQI 160
C C++ IVDCR KGL ++P LPE+ E+RLEQN I +P AF YK+L+RID+SKNQI
Sbjct: 141 CTCSNNIVDCRGKGLTEIPANLPESIVEIRLEQNAIKSIPAGAFTQYKKLKRIDISKNQI 200
Query: 161 SKVAVDAFQGLKSLTSLTLNNNNLTYLP-------------------------------- 188
S +A DAFQGLKSLTSL L N +T +P
Sbjct: 201 SDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQ 260
Query: 189 ----------------DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTK 232
G+FA L ++TL +++N F+CDCHL WL +L+ P +
Sbjct: 261 NLNLLSLYDNKLQTVSKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGAR 320
Query: 233 CFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAE 292
C +P + + I I +F+CSG S+ YR + EC +
Sbjct: 321 CSSPRRLANKRISQIKSKKFRCSG------SEDYRNRFGS---------------ECFMD 359
Query: 293 PSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRW 352
CP CRC IVDC + L ++P LPE TT+L D VL + I FK+
Sbjct: 360 LVCPEKCRCEGTIVDCSNQKLARIPSHLPEYTTDLRLN---DNDISVLEATGI---FKKL 413
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
N R L N I+ + F +R + L N IT + P AF L
Sbjct: 414 PNLRKMMLRSNLISCVNNDTFTGLSSVRLLSLYDNRITTITPGAFTTLVSL 464
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 163/328 (49%), Gaps = 31/328 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 266 SLYDNKLQTVSKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 325
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + + EC + CP CRC IVDC + L ++P
Sbjct: 326 RLANKRISQIKSKKFRCSGSEDYRNRFGSECFMDLVCPEKCRCEGTIVDCSNQKLARIPS 385
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTL 179
LPE TT+LRL NDI+ L F LR++ L N IS V D F GL S+ L+L
Sbjct: 386 HLPEYTTDLRLNDNDISVLEATGIFKKLPNLRKMMLRSNLISCVNNDTFTGLSSVRLLSL 445
Query: 180 NNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHI 239
+N +T + G F L L T+ + N F C+CHL+WL RWL++ + +C P +
Sbjct: 446 YDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGRWLRKRRIVSGNPRCQKPFFL 505
Query: 240 KGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPC 299
K I D+ +F C G+ EE S C P CP C
Sbjct: 506 KEIPIQDVAIQDFTCDGN----------EESS-----------------CQLSPRCPEQC 538
Query: 300 RCADGIVDCREKGLNKVPILLPEATTEL 327
C + +V C +GL +P +P+ TEL
Sbjct: 539 TCVETVVRCSNRGLRALPKGMPKDVTEL 566
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 124/257 (48%), Gaps = 54/257 (21%)
Query: 149 RLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
R+ L N IS + AF+ L+ L LTLNNNN++ + F + ++RTLR+ N
Sbjct: 15 RVSAWQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHL 74
Query: 209 ICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYRE 268
CDCHL+WL WL++ +G +T C AP H++G N+ D+ + E+ C G E S
Sbjct: 75 YCDCHLAWLSDWLRQRRTVGQFTLCMAPVHLRGFNVADVQKKEYVCPGPHAEAPS----- 129
Query: 269 ECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELT 328
C+ A SCP C C++ IVDCR KGL ++P LPE+ E+
Sbjct: 130 -CN------------------ANSLSCPSACTCSNNIVDCRGKGLTEIPANLPESIVEI- 169
Query: 329 YMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDI 388
RLEQN I +P AF YK+L+RI + +N I
Sbjct: 170 -----------------------------RLEQNAIKSIPAGAFTQYKKLKRIDISKNQI 200
Query: 389 TELPPKAFANYKRLRRM 405
+++ P AF K L +
Sbjct: 201 SDIAPDAFQGLKSLTSL 217
>gi|119570341|gb|EAW49956.1| slit homolog 1 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 1520
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 153/464 (32%), Positives = 231/464 (49%), Gaps = 84/464 (18%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 187 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEK---PTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
++G N+ ++ + EF CSG E PT ++ SCP C C++GIVDCR KGL +P
Sbjct: 247 SLRGLNVAEVQKSEFSCSGQGEAGRVPTCTLSSG-SCPAMCTCSNGIVDCRGKGLTAIPA 305
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRI----------DLSKNQISKVAVDAFQG 170
LPE TE+RLE N I +PP AF+ Y++LRRI DLS NQI+++A DAFQG
Sbjct: 306 NLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIRPLSFCSPCRDLSNNQIAEIAPDAFQG 365
Query: 171 LKSLTSLTLNNNNLTYLPDGVFA------------------------------------- 193
L+SL SL L N +T LP GVF
Sbjct: 366 LRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDN 425
Query: 194 -----------ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQ 242
L ++TL +++N FICDC+L WL +L+ P +C +P + +
Sbjct: 426 KIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANK 485
Query: 243 NILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCA 302
I I +F+CS + + + T+ + NS EC ++ CPH CRC
Sbjct: 486 RIGQIKSKKFRCS-----AKEQYFIP--GTEDYQLNS--------ECNSDVVCPHKCRCE 530
Query: 303 DGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQ 361
+V+C L K+P +P++T EL ++ + +L + + FK+ T+ + L
Sbjct: 531 ANVVECSSLKLTKIPERIPQSTAEL----RLNNNEISILEA--TGMFKKLTHLKKINLSN 584
Query: 362 NDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N ++E+ AF + + L N + + F LR +
Sbjct: 585 NKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTL 628
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 150/304 (49%), Gaps = 65/304 (21%)
Query: 115 LNKVPILL---PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L+ +P LL +A + L L +N I +P KAF L+ + L KNQIS + AF+ L
Sbjct: 121 LHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRAL 180
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T
Sbjct: 181 RGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFT 240
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C P+ ++G N+ ++ + EF CSG R +C + +
Sbjct: 241 QCSGPASLRGLNVAEVQKSEFSCSGQGEAGRVP--------------TCTL--------S 278
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++GIVDCR KGL +P LPE TE+
Sbjct: 279 SGSCPAMCTCSNGIVDCRGKGLTAIPANLPETMTEI------------------------ 314
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIR----------LEQNDITELPPKAFANYKR 401
RLE N I +PP AF+ Y++LRRIR L N I E+ P AF +
Sbjct: 315 ------RLELNGIKSIPPGAFSPYRKLRRIRPLSFCSPCRDLSNNQIAEIAPDAFQGLRS 368
Query: 402 LRRM 405
L +
Sbjct: 369 LNSL 372
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 192/460 (41%), Gaps = 91/460 (19%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 421 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPR 480
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + EC ++ CPH CRC +V+C
Sbjct: 481 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVVCPHKCRCEANVVECSSLK 540
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L K+P +P++T ELRL N+I+ L F L++I+LS N++S++ AF+G
Sbjct: 541 LTKIPERIPQSTAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAAS 600
Query: 171 ---------------------LKSLTSLTLNN------------------------NNLT 185
L L +L L N N +T
Sbjct: 601 VSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIT 660
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+C L+WL WL++ + +C P ++ +
Sbjct: 661 TVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWLRKRKIVTGNPRCQNPDFLRQIPLQ 720
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E G C P CP C C D +
Sbjct: 721 DVAFPDFRCEEGQEE--------------------------GGCLPRPQCPQECACLDTV 754
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L +P +P+ TEL +D L+ +S FK + L N +
Sbjct: 755 VRCSNKHLRALPKGIPKNVTELY----LDGNQFTLVPGQLS-TFKYL--QLVILSYNALQ 807
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+PP AF + LR + L NDI+ L FA+ L +
Sbjct: 808 CIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHL 847
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 134/253 (52%), Gaps = 3/253 (1%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 653 SLYDNQITTVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWLRKRKIVTGNPRCQNPD 712
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ G C P CP C C D +V C K L +P +P
Sbjct: 713 FLRQIPLQDVAFPDFRCEEGQEE--GGCLPRPQCPQECACLDTVVRCSNKHLRALPKGIP 770
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TEL L+ N T L P + +K L+ + LS N + + AFQGL+SL L+L+ N+
Sbjct: 771 KNVTELYLDGNQFT-LVPGQLSTFKYLQLVILSYNALQCIPPLAFQGLRSLRLLSLHGND 829
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
++ L +G+FA++ L L I N CDCHL WL W+K + +C P ++G+
Sbjct: 830 ISTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSSWVKTGYKEPGIARCAGPQDMEGKL 889
Query: 244 ILDIPEHEFKCSG 256
+L P +F+C G
Sbjct: 890 LLTTPAKKFECQG 902
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 57/113 (50%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDC GL +P +P T L L N+IT + FA K+LR + L
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQL 92
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+NQI V AF +K L L LN N L LP+ +F L L +SEN+
Sbjct: 93 MENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAI 145
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C VDC GL +P +P T L + I R+ K N+F
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHK--------NDFAGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I + AF + K L R+RL +N + LP F N + L R+
Sbjct: 85 KQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRL 138
>gi|308081783|ref|NP_001183971.1| slit homolog 3 protein precursor [Gallus gallus]
Length = 1519
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 150/451 (33%), Positives = 224/451 (49%), Gaps = 76/451 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 182 TLNNNNITRIPVTSFNHMPKIRTLRLHSNFLHCDCHLAWLSDWLRQRRTIGQFTFCLAPV 241
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++G + ++ + +F CSG +P A+ +CP C C++ +VDCR +GL ++P LP
Sbjct: 242 SLRGFLVAEVQKKDFVCSGSQSEPPSCSASSITCPSACTCSNNVVDCRGRGLTEIPANLP 301
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +PP AF YK+L+RID+SKNQIS++A DAF+GLKSL SL L N
Sbjct: 302 EDIWEIRLEQNLIKVIPPGAFTQYKKLKRIDISKNQISEIAPDAFKGLKSLISLVLYGNK 361
Query: 184 LTYLPD------------------------------------------------GVFAEL 195
+T +P G+FA L
Sbjct: 362 ITEIPQGLFDDLVSLQLLLLNANKINCLRVNTFQGLHNLKLLSLYDNKLQTISKGLFAPL 421
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N F+CDCHL WL +L+ P +C P + + I I +F+CS
Sbjct: 422 RSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSNPRRLANKRISQIKSKKFRCS 481
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
GS + RSK TG+C + CP CRC +VDC + L +
Sbjct: 482 GSE-DYRSKF--------------------TGKCFMDLVCPEKCRCEGTVVDCSNQKLTR 520
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P LPE TT+L ++ D +L + FK+ N R L N I E+ F
Sbjct: 521 LPSHLPEYTTDL----RLNDNDISVLEAI--GLFKKLPNLRKINLSNNKIKEIREGTFDG 574
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ + L +N + + + F L+ +
Sbjct: 575 ASGVQELILTENQLESVHGRMFRGLTGLKTL 605
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 128/473 (27%), Positives = 203/473 (42%), Gaps = 100/473 (21%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C P
Sbjct: 404 SLYDNKLQTISKGLFAPLRSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSNPR 463
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K TG+C + CP CRC +VDC + L ++P
Sbjct: 464 RLANKRISQIKSKKFRCSGSEDYRSKFTGKCFMDLVCPEKCRCEGTVVDCSNQKLTRLPS 523
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLS----------------------- 156
LPE TT+LRL NDI+ L F LR+I+LS
Sbjct: 524 HLPEYTTDLRLNDNDISVLEAIGLFKKLPNLRKINLSNNKIKEIREGTFDGASGVQELIL 583
Query: 157 -KNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPD------------------------GV 191
+NQ+ V F+GL L +L L +N+++ + + G
Sbjct: 584 TENQLESVHGRMFRGLTGLKTLMLRSNSISCINNDTFAGLSSVRLLSLYDNHISTITPGA 643
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F+ L L T+ + NSF C+CHL+WL +WL++ + +C P +K I D+ +
Sbjct: 644 FSTLVSLSTINLLANSFNCNCHLAWLGKWLRKKRIVSGNPRCLKPFFLKDIPIQDVDAQD 703
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ + C P CP C C D +V C K
Sbjct: 704 FTCEGNDESS---------------------------CLLSPPCPSQCTCVDSVVRCSNK 736
Query: 312 GLNKVPILLPEATTEL-------------------TYMVSIDRVDKVLLYSYISNNFKRW 352
GL +P +P+ TEL ++ + +L +Y +N +
Sbjct: 737 GLRVMPKGIPKDVTELYLEGNHLTAVPKGLSAFRHLTLIDLSNNSISVLANYTFSNMTQL 796
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L N + +P AF + LR + L NDI+ +P +F + L +
Sbjct: 797 S--TLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLVSLSHL 847
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/291 (34%), Positives = 145/291 (49%), Gaps = 57/291 (19%)
Query: 115 LNKVPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL + T T L L +N I +P KAF ++ + L NQIS + AF+ L
Sbjct: 116 LQVLPELLFQNTQKLTRLDLSENQIKGIPRKAFRGIIDVKNLQLDNNQISCIEDGAFRAL 175
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T +P F + ++RTLR+ N CDCHL+WL WL++ +G +T
Sbjct: 176 RDLEILTLNNNNITRIPVTSFNHMPKIRTLRLHSNFLHCDCHLAWLSDWLRQRRTIGQFT 235
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
C AP ++G + ++ + +F CSGS E S CS A+
Sbjct: 236 FCLAPVSLRGFLVAEVQKKDFVCSGSQSEPPS------CS------------------AS 271
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
+CP C C++ +VDCR +GL ++P LPE E+
Sbjct: 272 SITCPSACTCSNNVVDCRGRGLTEIPANLPEDIWEI------------------------ 307
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
RLEQN I +PP AF YK+L+RI + +N I+E+ P AF K L
Sbjct: 308 ------RLEQNLIKVIPPGAFTQYKKLKRIDISKNQISEIAPDAFKGLKSL 352
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/275 (33%), Positives = 138/275 (50%), Gaps = 28/275 (10%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N+++ + G F+ L L T+ + NSF C+CHL+WL +WL++ + +C P
Sbjct: 630 SLYDNHISTITPGAFSTLVSLSTINLLANSFNCNCHLAWLGKWLRKKRIVSGNPRCLKPF 689
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C D +V C KGL +P +P
Sbjct: 690 FLKDIPIQDVDAQDFTCEGNDES---SCLLSPPCPSQCTCVDSVVRCSNKGLRVMPKGIP 746
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVA------------------- 164
+ TEL LE N +T +P K + ++ L IDLS N IS +A
Sbjct: 747 KDVTELYLEGNHLTAVP-KGLSAFRHLTLIDLSNNSISVLANYTFSNMTQLSTLILSYNR 805
Query: 165 -----VDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
V AF GL+SL LTL+ N+++ +P+G F +L L L + N CDC+L WL
Sbjct: 806 LRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLVSLSHLALGTNPLHCDCNLRWLSE 865
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
W+K + +C P + + +L P H F+C
Sbjct: 866 WVKAGYKEPGIARCSGPEAMVDRLLLTTPTHHFQC 900
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
CPH C C VDC GL VP +P L M + V ++ Y Y+ + T
Sbjct: 28 GCPHKCTCIASNVDCHGLGLKTVPRDIPRNAERLNNMR--NNVVEIPTYEYVG----KET 81
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
LE+N I+ + AF + K+L R+RL +N + LP F N ++L R+
Sbjct: 82 ILVLHLEENQISVIERGAFQDLKQLERLRLNKNKLQVLPELLFQNTQKLTRL 133
>gi|118404438|ref|NP_001072738.1| slit homolog 3 precursor [Xenopus (Silurana) tropicalis]
gi|116487453|gb|AAI25721.1| hypothetical protein MGC146100 [Xenopus (Silurana) tropicalis]
Length = 1519
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 149/451 (33%), Positives = 222/451 (49%), Gaps = 76/451 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + ++RTLR+ N CDCHL+WL WL++ +G +T C +P
Sbjct: 183 TLNNNNITRIPLTSFNHMPKIRTLRLHSNYLYCDCHLTWLSDWLRQRKTIGQFTFCMSPV 242
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ D+ + +F C G +P A SCP C C++ +VDCR KGL ++P LP
Sbjct: 243 HLRGFNVADVQKKDFVCPGTQSEPPSCNANAVSCPSACTCSNNVVDCRGKGLTEIPANLP 302
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLT-------- 175
E E+RLEQN I +P F YK+L+RID+SKNQIS++A DAF GLKSLT
Sbjct: 303 EGIIEIRLEQNSIKAIPAGVFTPYKKLKRIDISKNQISEIAADAFSGLKSLTSLVLYGNK 362
Query: 176 ----------------S------------------------LTLNNNNLTYLPDGVFAEL 195
L+L +N L + G+FA L
Sbjct: 363 ITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPL 422
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N F+CDCHL WL +L+ P +C +P + + I I +F+C+
Sbjct: 423 QSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCTSPRRLANKRISQIKSKKFRCT 482
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
GS + RSK +G+C + CP CRC IVDC + +++
Sbjct: 483 GSE-DYRSKF--------------------SGDCFMDLVCPEKCRCEGTIVDCSNQKISR 521
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P LPE T++L D VL + I FK+ N R L N I ++ AF
Sbjct: 522 IPSYLPEYTSDLRLN---DNEITVLEATGI---FKKLPNLRKINLSNNKIKDIREGAFDG 575
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ + L N + + + F L+ +
Sbjct: 576 AAGVQELMLTGNQLESVHGRMFRGLVGLKTL 606
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 133/471 (28%), Positives = 207/471 (43%), Gaps = 96/471 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 405 SLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCTSPR 464
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+C+G + K +G+C + CP CRC IVDC + ++++P
Sbjct: 465 RLANKRISQIKSKKFRCTGSEDYRSKFSGDCFMDLVCPEKCRCEGTIVDCSNQKISRIPS 524
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVDA--------- 167
LPE T++LRL N+IT L F LR+I+LS N+I + A D
Sbjct: 525 YLPEYTSDLRLNDNEITVLEATGIFKKLPNLRKINLSNNKIKDIREGAFDGAAGVQELML 584
Query: 168 ------------FQGLKSLTS------------------------LTLNNNNLTYLPDGV 191
F+GL L + L+L +N +T + G
Sbjct: 585 TGNQLESVHGRMFRGLVGLKTLMLRSNLMSCINNDTFTGLSSVRLLSLYDNRITTITPGA 644
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L T+ + N F C+CHL+WL +WL++ + +C P +K I D+ +
Sbjct: 645 FNTLVSLSTINLLSNPFNCNCHLAWLGKWLRKKRVVSGNPRCQKPYFLKEIPIQDVAIQD 704
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ EE S C CP C C + +V C +
Sbjct: 705 FTCDGN----------EESS-----------------CLPASHCPEQCTCVESVVRCGNQ 737
Query: 312 GLNKVPILLPEATTEL----TYMVSIDR---VDKVLLYSYISNN---------FKRWTNR 355
GL +P +P+ TEL ++ S+ + K L +SNN F T
Sbjct: 738 GLRTLPKNIPKDVTELYLEGNHLTSVPKEISSFKHLTLIDLSNNSISVLSNYTFSNVTQL 797
Query: 356 SRR-LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
S L N + +P AF K LR + L NDI+ +P +F++ L +
Sbjct: 798 STLILSYNRLRCIPVHAFNGLKSLRVLTLHGNDISTVPDGSFSDLTSLSHL 848
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 92/279 (32%), Positives = 134/279 (48%), Gaps = 54/279 (19%)
Query: 127 TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTY 186
T L L +N I LP K+F ++ + L NQIS + F+ L+ L LTLNNNN+T
Sbjct: 132 TRLDLSENQIQGLPRKSFRGITDVKNLQLDNNQISCIEDGVFRALRELEILTLNNNNITR 191
Query: 187 LPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILD 246
+P F + ++RTLR+ N CDCHL+WL WL++ +G +T C +P H++G N+ D
Sbjct: 192 IPLTSFNHMPKIRTLRLHSNYLYCDCHLTWLSDWLRQRKTIGQFTFCMSPVHLRGFNVAD 251
Query: 247 IPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIV 306
+ + +F C G+ E P A SCP C C++ +V
Sbjct: 252 VQKKDFVCPGTQSE------------------------PPSCNANAVSCPSACTCSNNVV 287
Query: 307 DCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITE 366
DCR KGL ++P LPE E+ RLEQN I
Sbjct: 288 DCRGKGLTEIPANLPEGIIEI------------------------------RLEQNSIKA 317
Query: 367 LPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+P F YK+L+RI + +N I+E+ AF+ K L +
Sbjct: 318 IPAGVFTPYKKLKRIDISKNQISEIAADAFSGLKSLTSL 356
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 105/327 (32%), Positives = 155/327 (47%), Gaps = 39/327 (11%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CHL+WL +WL++ + +C P
Sbjct: 631 SLYDNRITTITPGAFNTLVSLSTINLLSNPFNCNCHLAWLGKWLRKKRVVSGNPRCQKPY 690
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C CP C C + +V C +GL +P +P
Sbjct: 691 FLKEIPIQDVAIQDFTCDGNEES---SCLPASHCPEQCTCVESVVRCGNQGLRTLPKNIP 747
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVA------------------- 164
+ TEL LE N +T +P K +++K L IDLS N IS ++
Sbjct: 748 KDVTELYLEGNHLTSVP-KEISSFKHLTLIDLSNNSISVLSNYTFSNVTQLSTLILSYNR 806
Query: 165 -----VDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
V AF GLKSL LTL+ N+++ +PDG F++L L L + N CDC+L WL
Sbjct: 807 LRCIPVHAFNGLKSLRVLTLHGNDISTVPDGSFSDLTSLSHLALGTNPLYCDCNLRWLSE 866
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG-SSMETRSKIYREECSTDFHPYN 278
W+K + +C P + + +L P +F+C G M SK C+ F N
Sbjct: 867 WVKAGYKEPGIARCSGPEDMADRLLLTTPTQKFQCKGPVDMNIASK-----CNPCFS--N 919
Query: 279 SCPVEKPTGECAAEPSCPHPCRCADGI 305
C K G C ++P + C C G
Sbjct: 920 PC---KNNGTCNSDPVELYRCTCPFGF 943
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
CP C C+ VDC GL VP +P L +DK + +F
Sbjct: 29 GCPSKCTCSGPNVDCHGLGLKTVPKGIPRNAERLD-------MDKNNITRITKTDFAGLK 81
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R LE N I+ + AF + K+L R+RL +N + LP F N +L R+
Sbjct: 82 NLRVLHLEDNQISIIERGAFQDLKQLERMRLNKNKLQVLPELLFQNNAKLTRL 134
>gi|355720602|gb|AES06985.1| slit-like protein 2 [Mustela putorius furo]
Length = 544
Score = 247 bits (630), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 135/371 (36%), Positives = 188/371 (50%), Gaps = 61/371 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 181 TLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFTLCMAPV 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ D+ + E+ C GP +P A SCP C C++ IVDCR KGL ++P LP
Sbjct: 241 HLRGFNVADVQKKEYVCPGPHSEPPSCNANSISCPSACTCSNNIVDCRGKGLTEIPANLP 300
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N
Sbjct: 301 EGIVEIRLEQNSIRSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 360
Query: 184 LTYLPDGV------------------------------------------------FAEL 195
+T L G+ F+ L
Sbjct: 361 ITELAKGLFDGLVSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 420
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 421 RAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 480
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
F P K +G+C A+ +CP CRC VDC + L K
Sbjct: 481 AKEQY-------------FIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLIK 527
Query: 316 VPILLPEATTE 326
+P +P+ T E
Sbjct: 528 IPDHIPQYTAE 538
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 142/294 (48%), Gaps = 57/294 (19%)
Query: 115 LNKVPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL ++T T L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 115 LQVLPELLFQSTPKLTRLDLSENQILGIPRKAFRGIANVKNLQLDNNHISCIEDGAFRAL 174
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T
Sbjct: 175 RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFT 234
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
C AP H++G N+ D+ + E+ C G P +P A
Sbjct: 235 LCMAPVHLRGFNVADVQKKEYVCPG------------------------PHSEPPSCNAN 270
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++ IVDCR KGL ++P LPE E+
Sbjct: 271 SISCPSACTCSNNIVDCRGKGLTEIPANLPEGIVEI------------------------ 306
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF YK+L+RI + +N I+++ P AF K L +
Sbjct: 307 ------RLEQNSIRSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 354
>gi|443706058|gb|ELU02319.1| hypothetical protein CAPTEDRAFT_179696 [Capitella teleta]
Length = 1459
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 151/462 (32%), Positives = 215/462 (46%), Gaps = 86/462 (18%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
T+N NN+T LPD +FA + LR RI +N CDCHLSWL WL+ +P L L+TKC P
Sbjct: 175 TINRNNVTTLPDNLFAGMNHLRIARIGDNQLFCDCHLSWLAAWLRTHPTLALFTKCAGPP 234
Query: 64 HIKGQNILDIPEHEFKCSGPVE------------KPTGECAAEPSCPHPCRCADGIVDCR 111
+++ I ++ E +F+C V P +C CP+ C C+D IVDCR
Sbjct: 235 NLRNAEIAELQEVDFRCDESVAASSPMASDAAYVSPAQDCVIPQVCPNQCICSDTIVDCR 294
Query: 112 EKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
KGL ++P +P+ TTELR+EQN I+E+P AF YKRLRRIDLS NQI +VA DAF GL
Sbjct: 295 NKGLTEIPPNIPDGTTELRMEQNQISEIPSMAFVEYKRLRRIDLSNNQIGRVAADAFAGL 354
Query: 172 KSLT------------------------S------------------------LTLNNNN 183
K+L L+L +N+
Sbjct: 355 KALNSLVLYGNQINELPDGVFKGLTSLQLLLLNANKITCVRVDTFYDLINLNLLSLYDNS 414
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+ L +G F L ++TL ++ N FICDC+L WL +L +P +C +P ++ +
Sbjct: 415 IQSLANGTFVPLKNIQTLHLARNPFICDCNLRWLSEYLHSHPIETSGARCHSPRRMERKK 474
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
I + +FKC GS ++ +C + CP C C
Sbjct: 475 IGQMRGSKFKCKGSEEHRTAR---------------------AAQCVIDKECPEACLCEG 513
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQND 363
VDC + L ++P LP TT L D + L S I + + ++ L N
Sbjct: 514 TTVDCSGRKLTQIPGELPAYTTTLKLA---DNEIESLPNSGIFDGLENL--KTLDLRNNA 568
Query: 364 ITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I + +A L I+L N +T L P AF K L+ +
Sbjct: 569 IHTIEDRALEGAPHLEEIQLTDNRLTSLTPAAFHGLKALKTL 610
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 162/386 (41%), Gaps = 115/386 (29%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL---------------------- 129
AA+P CP C C VDC +GL +P +P AT L
Sbjct: 18 AADP-CPKECICQGASVDCSFRGLTSIPDGVPLATERLDLQGNNLTMIRRRDLTGLRNLR 76
Query: 130 --------------------------RLEQNDITELPPKAFANYKRLRRIDLS------- 156
RL +N +T LP A+ +L R+DLS
Sbjct: 77 ILQLLDNQIHTVEKNAFDDMISLERLRLNRNKLTGLPDMLLAHMPKLYRLDLSYNKLQVI 136
Query: 157 -----------------KNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLR 199
N+I V+ A + LK + LT+N NN+T LPD +FA + LR
Sbjct: 137 GRKTLKGAPLLKNLQLDNNEIKCVSEAALRSLKDMEILTINRNNVTTLPDNLFAGMNHLR 196
Query: 200 TLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSM 259
RI +N CDCHLSWL WL+ +P L L+TKC P +++ I ++ E +F+C S+
Sbjct: 197 IARIGDNQLFCDCHLSWLAAWLRTHPTLALFTKCAGPPNLRNAEIAELQEVDFRCD-ESV 255
Query: 260 ETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPIL 319
S + + P +C CP+ C C+D IVDCR KGL ++P
Sbjct: 256 AASSPMASDAAYV-----------SPAQDCVIPQVCPNQCICSDTIVDCRNKGLTEIPPN 304
Query: 320 LPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLR 379
+P+ TTEL R+EQN I+E+P AF YKRLR
Sbjct: 305 IPDGTTEL------------------------------RMEQNQISEIPSMAFVEYKRLR 334
Query: 380 RIRLEQNDITELPPKAFANYKRLRRM 405
RI L N I + AFA K L +
Sbjct: 335 RIDLSNNQIGRVAADAFAGLKALNSL 360
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/455 (25%), Positives = 187/455 (41%), Gaps = 87/455 (19%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N++ L +G F L ++TL ++ N FICDC+L WL +L +P +C +P
Sbjct: 409 SLYDNSIQSLANGTFVPLKNIQTLHLARNPFICDCNLRWLSEYLHSHPIETSGARCHSPR 468
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPT---GECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
++ + I + +FKC G E T +C + CP C C VDC + L ++P
Sbjct: 469 RMERKKIGQMRGSKFKCKGSEEHRTARAAQCVIDKECPEACLCEGTTVDCSGRKLTQIPG 528
Query: 121 LLPEATTELRLEQNDITELP-------------------------PKAFANYKRLRRIDL 155
LP TT L+L N+I LP +A L I L
Sbjct: 529 ELPAYTTTLKLADNEIESLPNSGIFDGLENLKTLDLRNNAIHTIEDRALEGAPHLEEIQL 588
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLR---------------- 199
+ N+++ + AF GLK+L +L L N +T + + F +L LR
Sbjct: 589 TDNRLTSLTPAAFHGLKALKTLMLRTNKITCINNSTFTDLENLRLLSLYDNKIRCIQPGS 648
Query: 200 --------TLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
TL + N F C+CHL WL WL ++ + +C P K I ++ +
Sbjct: 649 FDRLKYLSTLNLLSNPFECNCHLGWLSDWLTKHEVVSGNPRCTGPETFKDMAIEELKPTD 708
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
FKC + G C CP C C+ V C +
Sbjct: 709 FKCQ--------------------------QQGEPGSCDPRAYCPPKCLCSGTEVRCSHQ 742
Query: 312 GLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPK 370
L ++P + TT+L + ++++ ++S + R T S L N + LP
Sbjct: 743 ELEEIPPFIALDTTKL--FLDVNQI------GFLSPDLHRLTKLTSLDLSNNKLVSLPEY 794
Query: 371 AFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
AFAN L+ + + N++ + FA LR +
Sbjct: 795 AFANLTELQTLIMSYNELQCVQENTFAGLANLRVL 829
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 138/326 (42%), Gaps = 35/326 (10%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + + G F L L TL + N F C+CHL WL WL ++ + +C P
Sbjct: 635 SLYDNKIRCIQPGSFDRLKYLSTLNLLSNPFECNCHLGWLSDWLTKHEVVSGNPRCTGPE 694
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
K I ++ +FKC E G C CP C C+ V C + L ++P +
Sbjct: 695 TFKDMAIEELKPTDFKCQQQGEP--GSCDPRAYCPPKCLCSGTEVRCSHQELEEIPPFIA 752
Query: 124 EATTELRLEQNDI-----------------------TELPPKAFANYKRLRRIDLSKNQI 160
TT+L L+ N I LP AFAN L+ + +S N++
Sbjct: 753 LDTTKLFLDVNQIGFLSPDLHRLTKLTSLDLSNNKLVSLPEYAFANLTELQTLIMSYNEL 812
Query: 161 SKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW 220
V + F GL +L L+L+ N+L+ +P G F L L L + N CDC+L WL W
Sbjct: 813 QCVQENTFAGLANLRVLSLHGNDLSSIPYGSFKSLTSLTHLALGGNPLYCDCNLKWLSDW 872
Query: 221 LK-RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
+K Y G+ + C P + +L H+F+C + + C T
Sbjct: 873 IKIDYKEPGIAS-CVGPPEMANNLLLTTESHKFQCYDDEVSPQILAKCNVCYTF------ 925
Query: 280 CPVEKPTGECAAEPSCPHPCRCADGI 305
P E GEC E C C DG
Sbjct: 926 -PCEH-DGECRLEGFNRFTCECPDGF 949
>gi|348511809|ref|XP_003443436.1| PREDICTED: slit homolog 3 protein-like [Oreochromis niloticus]
Length = 1526
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 148/452 (32%), Positives = 221/452 (48%), Gaps = 77/452 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRTLR+ N+ CDC LSWL WL+ L +T+C AP+
Sbjct: 185 TLNNNNITLIPLSSFNHMPKLRTLRLHSNNLHCDCQLSWLSDWLRARRGLAPFTQCMAPA 244
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPS-CPHPCRCADGIVDCREKGLNKVPILL 122
H++G N+ D+ + +F C+GP + + CA + + CP C C + IVDCR KGL ++P+ L
Sbjct: 245 HMRGLNVPDVQKKDFVCNGPAQTESRTCAPQVTVCPPSCSCNNNIVDCRRKGLTEIPVNL 304
Query: 123 PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLT------- 175
PE E+RLEQN I +P AF+ YK+L+RIDLSKNQIS +A DAF GL+SLT
Sbjct: 305 PEGIVEIRLEQNLIKGVPAGAFSAYKKLKRIDLSKNQISDIAADAFSGLRSLTSLVLYGN 364
Query: 176 -----------------S------------------------LTLNNNNLTYLPDGVFAE 194
L+L +N L + G+F
Sbjct: 365 KITELPKGIFDGLVSLQLLLLNANKINCLRVNAFQDLQNLNLLSLYDNKLQTISKGLFTP 424
Query: 195 LFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
L ++TL +++N F+CDCHL WL +L P +C P + + I + +F+C
Sbjct: 425 LRSIKTLHLAQNPFMCDCHLKWLADYLFDNPIETSGARCSHPRRLANKRISQVKGKKFRC 484
Query: 255 SGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLN 314
+G + RS++ +GEC + CP CRC +VDC L
Sbjct: 485 TGQE-DYRSRL--------------------SGECFQDLVCPEKCRCEGTVVDCSNLKLT 523
Query: 315 KVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFA 373
++P +PE TT+L D ++ + FK+ N R L N + ++ AF
Sbjct: 524 RIPPHIPEHTTDLRLN------DNEIVVLEATGIFKKLPNLRKINLSNNKLKDIREGAFD 577
Query: 374 NYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L N +T L + F L+ +
Sbjct: 578 GAGGVLELLLTGNKLTALQGRVFRGLSGLKTL 609
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 125/473 (26%), Positives = 196/473 (41%), Gaps = 100/473 (21%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+F L ++TL +++N F+CDCHL WL +L P +C P
Sbjct: 408 SLYDNKLQTISKGLFTPLRSIKTLHLAQNPFMCDCHLKWLADYLFDNPIETSGARCSHPR 467
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I + +F+C+G + + +GEC + CP CRC +VDC L ++P
Sbjct: 468 RLANKRISQVKGKKFRCTGQEDYRSRLSGECFQDLVCPEKCRCEGTVVDCSNLKLTRIPP 527
Query: 121 LLPEATTELRLEQNDI-------------------------------------------- 136
+PE TT+LRL N+I
Sbjct: 528 HIPEHTTDLRLNDNEIVVLEATGIFKKLPNLRKINLSNNKLKDIREGAFDGAGGVLELLL 587
Query: 137 -----TELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGV 191
T L + F L+ + L NQIS + F GL S+ L+L +N ++ + G
Sbjct: 588 TGNKLTALQGRVFRGLSGLKTLMLRSNQISCIDNSTFTGLSSVRLLSLYDNRISSIAPGS 647
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F+ L L T+ + N ++CDCHL+WL +WLK+ + +C P+ +K I D+ +
Sbjct: 648 FSTLHSLSTINLLSNPYVCDCHLAWLGQWLKKTRVVSGNPRCQKPAFLKEIPIQDVATPD 707
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ C CP C C+DG+V C +
Sbjct: 708 FTCDGAE---------------------------DNGCLPASGCPDVCTCSDGVVRCSNR 740
Query: 312 GLNKVPILLPEATTEL-------------------TYMVSIDRVDKVLLYSYISNNFKRW 352
GL+ +P +P+ TTEL +V + L Y NN +
Sbjct: 741 GLHSLPKGIPKDTTELYLEGNMLTSVPKELANLKQLSLVDLSNNSISALAPYTFNNMTQL 800
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L N I +P AF K LR + L ND++ +P AF + L +
Sbjct: 801 A--TLILSYNQIRCIPVHAFDGLKSLRLLTLHGNDLSTIPEGAFNHLSSLSHL 851
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 142/277 (51%), Gaps = 28/277 (10%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N ++ + G F+ L L T+ + N ++CDCHL+WL +WLK+ + +C P+
Sbjct: 634 SLYDNRISSIAPGSFSTLHSLSTINLLSNPYVCDCHLAWLGQWLKKTRVVSGNPRCQKPA 693
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G + C CP C C+DG+V C +GL+ +P +P
Sbjct: 694 FLKEIPIQDVATPDFTCDGAEDN---GCLPASGCPDVCTCSDGVVRCSNRGLHSLPKGIP 750
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVA------------------- 164
+ TTEL LE N +T +P K AN K+L +DLS N IS +A
Sbjct: 751 KDTTELYLEGNMLTSVP-KELANLKQLSLVDLSNNSISALAPYTFNNMTQLATLILSYNQ 809
Query: 165 -----VDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
V AF GLKSL LTL+ N+L+ +P+G F L L L + N C+C L WL +
Sbjct: 810 IRCIPVHAFDGLKSLRLLTLHGNDLSTIPEGAFNHLSSLSHLALGANPLYCNCDLRWLSQ 869
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P + F+C G
Sbjct: 870 WVKAGFKEPGIARCTGPPDMADRLLLTTPLNRFQCKG 906
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 138/278 (49%), Gaps = 55/278 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L N IS + AF+ L+ L LTLNNNN+T +P
Sbjct: 136 LDLSENQIQAVPRKAFRGITGVKNLQLDSNHISCIEDGAFRALRDLEILTLNNNNITLIP 195
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRTLR+ N+ CDC LSWL WL+ L +T+C AP+H++G N+ D+
Sbjct: 196 LSSFNHMPKLRTLRLHSNNLHCDCQLSWLSDWLRARRGLAPFTQCMAPAHMRGLNVPDVQ 255
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPS-CPHPCRCADGIVD 307
+ +F C+G P + + CA + + CP C C + IVD
Sbjct: 256 KKDFVCNG------------------------PAQTESRTCAPQVTVCPPSCSCNNNIVD 291
Query: 308 CREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITEL 367
CR KGL ++P+ LPE E+ RLEQN I +
Sbjct: 292 CRRKGLTEIPVNLPEGIVEI------------------------------RLEQNLIKGV 321
Query: 368 PPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+L+RI L +N I+++ AF+ + L +
Sbjct: 322 PAGAFSAYKKLKRIDLSKNQISDIAADAFSGLRSLTSL 359
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 43/105 (40%), Gaps = 30/105 (28%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
CPH C C+ VDC+ GL VP +P + +R+D
Sbjct: 31 GCPHKCSCSGSHVDCQGLGLKTVPKGIPR---------NAERLD---------------- 65
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFAN 398
L +N+IT + F+ K LR + LE N IT + AF +
Sbjct: 66 -----LNKNNITRITKVDFSGLKNLRILHLEDNQITVIERGAFQD 105
>gi|431838945|gb|ELK00874.1| Slit like protein 1 protein, partial [Pteropus alecto]
Length = 935
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 149/454 (32%), Positives = 217/454 (47%), Gaps = 93/454 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 25 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 84
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++G N+ ++ + EF CS C C++GIVDCR KGL +P LP
Sbjct: 85 SLRGLNVAEVQKSEFSCSAM-----------------CTCSNGIVDCRGKGLTAIPANLP 127
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
EA TE+RLE N I +PP AF+ Y++LRRIDLS NQI+++A DAFQGL+SL SL L N
Sbjct: 128 EAMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNK 187
Query: 184 LTYLPDGVFA------------------------------------------------EL 195
+T LP GVF L
Sbjct: 188 ITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSL 247
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N FICDC+L WL +L+ P +C +P + + I I +F+CS
Sbjct: 248 RAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANKRIGQIKSKKFRCS 307
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
Y + D+ NS EC ++ CPH CRC +V+C L K
Sbjct: 308 AKEQ------YFIPGTEDYQ-LNS--------ECNSDVVCPHKCRCEASVVECSGLKLTK 352
Query: 316 VPILLPEATTEL---TYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPPKA 371
+P +P++T EL +SI V FK+ + + L N ++E+ A
Sbjct: 353 IPERIPQSTAELRLNNNEISILEATGV---------FKKLPHLKKINLSNNKVSEIEDGA 403
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + + L N + + F LR +
Sbjct: 404 FEGATSVSELHLTANQLESIRSSMFRGLDGLRTL 437
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 188/451 (41%), Gaps = 91/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 230 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPR 289
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + EC ++ CPH CRC +V+C
Sbjct: 290 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVVCPHKCRCEASVVECSGLK 349
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L K+P +P++T ELRL N+I+ L F L++I+LS N++S++ AF+G
Sbjct: 350 LTKIPERIPQSTAELRLNNNEISILEATGVFKKLPHLKKINLSNNKVSEIEDGAFEGATS 409
Query: 171 ---------------------LKSLTS------------------------LTLNNNNLT 185
L L + L+L +N +
Sbjct: 410 VSELHLTANQLESIRSSMFRGLDGLRTLMLRSNRVSCIHNDSFAGLRNVRLLSLYDNQIA 469
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+C L+WL WL++ + +C P ++ +
Sbjct: 470 TISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQ 529
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E G C P CP C C D +
Sbjct: 530 DVAFPDFRCEEGQEE--------------------------GGCLPRPQCPQECACLDTV 563
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L +P +P+ TEL +D L+ +S FK + L N I+
Sbjct: 564 VRCSNKHLQALPKGVPKNVTELY----LDGNQFTLVPGQLS-TFKYL--QLVDLSNNKIS 616
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L +F N +L + L N + +PP AF
Sbjct: 617 SLSNSSFTNMSQLTTLILSYNALQCIPPLAF 647
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 119/251 (47%), Gaps = 71/251 (28%)
Query: 155 LSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHL 214
L KNQIS + AF+ L+ L LTLNNNN+T +P F + +LRT R+ N CDCHL
Sbjct: 2 LDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHL 61
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDF 274
+WL +WL++ P +GL+T+C P+ ++G N+ ++ + EF CS
Sbjct: 62 AWLSQWLRQRPTIGLFTQCSGPASLRGLNVAEVQKSEFSCSAM----------------- 104
Query: 275 HPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSID 334
C C++GIVDCR KGL +P LPEA TE+
Sbjct: 105 ------------------------CTCSNGIVDCRGKGLTAIPANLPEAMTEI------- 133
Query: 335 RVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPK 394
RLE N I +PP AF+ Y++LRRI L N I E+ P
Sbjct: 134 -----------------------RLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPD 170
Query: 395 AFANYKRLRRM 405
AF + L +
Sbjct: 171 AFQGLRSLNSL 181
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 134/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + + G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 462 SLYDNQIATISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPD 521
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ G C P CP C C D +V C K L +P +P
Sbjct: 522 FLRQIPLQDVAFPDFRCEEGQEE--GGCLPRPQCPQECACLDTVVRCSNKHLQALPKGVP 579
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN--- 180
+ TEL L+ N T L P + +K L+ +DLS N+IS ++ +F + LT+L L+
Sbjct: 580 KNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 638
Query: 181 ---------------------NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
N++ LP+G+FA++ L L I N CDCHL WL
Sbjct: 639 LQCIPPLAFQGLRSLRLLSLHGNDIATLPEGIFADVTSLSHLAIGANPLYCDCHLRWLSS 698
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 699 WVKTGYKEPGIARCAGPPDMEGKLLLTTPAKKFECQG 735
>gi|119581904|gb|EAW61500.1| slit homolog 3 (Drosophila), isoform CRA_b [Homo sapiens]
Length = 1320
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 148/432 (34%), Positives = 209/432 (48%), Gaps = 76/432 (17%)
Query: 23 RLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 82
++RTLR+ N CDCHL+WL WL++ +G +T C AP H++G N+ D+ + E+ C
Sbjct: 3 KIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFTLCMAPVHLRGFNVADVQKKEYVCPA 62
Query: 83 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPK 142
P +P A SCP PC C++ IVDCR KGL ++P LPE E+RLEQN I +P
Sbjct: 63 PHSEPPSCNANSISCPSPCTCSNNIVDCRGKGLMEIPANLPEGIVEIRLEQNSIKAIPAG 122
Query: 143 AFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLT----------------- 185
AF YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N +T
Sbjct: 123 AFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIAKGLFDGLVSLQLLL 182
Query: 186 -------------------------------YLPDGVFAELFRLRTLRISENSFICDCHL 214
+ G+FA L ++TL +++N F+CDCHL
Sbjct: 183 LNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHL 242
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDF 274
WL +L+ P +C +P + + I I +F+CSGS + RS+
Sbjct: 243 KWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCSGSE-DYRSRF--------- 292
Query: 275 HPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSID 334
+ EC + CP CRC IVDC + L ++P LPE T+L D
Sbjct: 293 -----------SSECFMDLVCPEKCRCEGTIVDCSNQKLVRIPSHLPEYVTDLRLN---D 338
Query: 335 RVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPP 393
VL + I FK+ N R L N I E+ AF ++ + L N + +
Sbjct: 339 NEVSVLEATGI---FKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHG 395
Query: 394 KAFANYKRLRRM 405
+ F L+ +
Sbjct: 396 RVFRGLSGLKTL 407
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 131/471 (27%), Positives = 204/471 (43%), Gaps = 96/471 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 206 SLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 265
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + + + EC + CP CRC IVDC + L ++P
Sbjct: 266 RLANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLVRIPS 325
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVDA--------- 167
LPE T+LRL N+++ L F LR+I+LS N+I +V A D
Sbjct: 326 HLPEYVTDLRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELML 385
Query: 168 ------------FQGLKSLTS------------------------LTLNNNNLTYLPDGV 191
F+GL L + L+L +N +T + G
Sbjct: 386 TGNQLETVHGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGA 445
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L T+ + N F C+CHL+WL +WL++ + +C P +K I D+ +
Sbjct: 446 FTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 505
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ EE S C P CP C C + +V C K
Sbjct: 506 FTCDGN----------EESS-----------------CQLSPRCPEQCTCMETVVRCSNK 538
Query: 312 GLNKVPILLPEATTEL----TYMVSIDRVDKVL----LYSYISNNFKRWTNRSRR----- 358
GL +P +P+ TEL ++ ++ R L L +N+ TN +
Sbjct: 539 GLRALPRGMPKDVTELYLEGNHLTAVPRELSALRHLTLIDLSNNSISMLTNYTFSNMSHL 598
Query: 359 ----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P AF + LR + L NDI+ +P +F + L +
Sbjct: 599 STLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHL 649
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 134/277 (48%), Gaps = 28/277 (10%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CHL+WL +WL++ + +C P
Sbjct: 432 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPF 491
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C + +V C KGL +P +P
Sbjct: 492 FLKEIPIQDVAIQDFTCDGNEES---SCQLSPRCPEQCTCMETVVRCSNKGLRALPRGMP 548
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISK--------------------- 162
+ TEL LE N +T +P + + + L IDLS N IS
Sbjct: 549 KDVTELYLEGNHLTAVP-RELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNR 607
Query: 163 ---VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
+ V AF GL+SL LTL+ N+++ +P+G F +L L L + N CDC L WL
Sbjct: 608 LRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSE 667
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C +P + + +L P H F+C G
Sbjct: 668 WVKAGYKEPGIARCSSPEPMADRLLLTTPTHRFQCKG 704
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TL+ N+++ +P+G F +L L L + N CDC L WL W+K + +C +P
Sbjct: 626 TLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSSPE 685
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ + +L P H F+C GPV+
Sbjct: 686 PMADRLLLTTPTHRFQCKGPVD 707
>gi|143347091|gb|ABO93215.1| Slit [Platynereis dumerilii]
Length = 822
Score = 243 bits (621), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 149/456 (32%), Positives = 225/456 (49%), Gaps = 85/456 (18%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
T+N NN+T LPD +F + +LR +RI++N +CDCHL+WL RWL+ +P L L+TKC P
Sbjct: 173 TVNKNNITTLPDDIFDTMNKLRVVRIADNKLVCDCHLAWLARWLRMHPTLALFTKCHYPQ 232
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+++ I ++ E +F+C+ + EC P CP C C DGIVDCR+KGL ++P+ +P
Sbjct: 233 NLRNTEIAELQESDFQCTDTLHPQ--ECIVPPMCPAQCLCTDGIVDCRDKGLTEIPLDIP 290
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TE+RLEQN ITE+ K F N+KRLRRIDLS NQI+ VA DAF GLKSL+SL L N
Sbjct: 291 DTVTEMRLEQNQITEIKSKTFINFKRLRRIDLSNNQIAYVAPDAFAGLKSLSSLVLYGNK 350
Query: 184 LTYLPDGVF--------------------AELFR-------------------------- 197
+ L +GVF + FR
Sbjct: 351 IAELLEGVFDGLTSLQLLLLNANKITCVRTDTFRDLHNLNLLSLYDNKIESLANGTFDPL 410
Query: 198 --LRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL ++ N FICDC+L WL +L +P +C P ++ + I I +FKC
Sbjct: 411 KNIQTLHLARNPFICDCNLRWLSEYLHSHPIETSGARCENPRRMQRKRIGSIRHSKFKCR 470
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADG-IVDCREK--- 311
S E ++ E+C G +C A G + C K
Sbjct: 471 PGSEEAKT----EKC----------------GASVTSAACVRKSASARGRLSTCSRKETH 510
Query: 312 --GLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPP 369
L +PI + E ++ R++ +++ + N ++ R+ R+E+ + P
Sbjct: 511 SGSLENLPIFVTELKLRDNEIM---RIENSGVFAKLG-NLQKLDLRNNRIER-----IAP 561
Query: 370 KAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
KAF RL ++L +N + L F + L+ +
Sbjct: 562 KAFEGAARLTDLQLTENRLKSLDGSMFVGLRNLKTL 597
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 105/301 (34%), Positives = 149/301 (49%), Gaps = 80/301 (26%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLS------------------------KNQISKVA 164
LRL +N + +LP FAN +L R+DLS N+I+ ++
Sbjct: 100 LRLNRNKLQQLPDNLFANMPKLYRLDLSYNKIKVIGRKTLKGAPLLRNLQLDNNEITCIS 159
Query: 165 VDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRY 224
A +GLK + LT+N NN+T LPD +F + +LR +RI++N +CDCHL+WL RWL+ +
Sbjct: 160 DVALKGLKDMEILTVNKNNITTLPDDIFDTMNKLRVVRIADNKLVCDCHLAWLARWLRMH 219
Query: 225 PRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEK 284
P L L+TKC P +++ I ++ E +F+C+ + HP
Sbjct: 220 PTLALFTKCHYPQNLRNTEIAELQESDFQCTDT----------------LHPQ------- 256
Query: 285 PTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSY 344
EC P CP C C DGIVDCR+KGL ++P+ +P+ TE+
Sbjct: 257 ---ECIVPPMCPAQCLCTDGIVDCRDKGLTEIPLDIPDTVTEM----------------- 296
Query: 345 ISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRR 404
RLEQN ITE+ K F N+KRLRRI L N I + P AFA K L
Sbjct: 297 -------------RLEQNQITEIKSKTFINFKRLRRIDLSNNQIAYVAPDAFAGLKSLSS 343
Query: 405 M 405
+
Sbjct: 344 L 344
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 184/455 (40%), Gaps = 96/455 (21%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L +G F L ++TL ++ N FICDC+L WL +L +P +C P
Sbjct: 393 SLYDNKIESLANGTFDPLKNIQTLHLARNPFICDCNLRWLSEYLHSHPIETSGARCENPR 452
Query: 64 HIKGQNILDIPEHEFKCS-GPVEKPTGECAAE---PSCPHPCRCADG-IVDCREK----- 113
++ + I I +FKC G E T +C A +C A G + C K
Sbjct: 453 RMQRKRIGSIRHSKFKCRPGSEEAKTEKCGASVTSAACVRKSASARGRLSTCSRKETHSG 512
Query: 114 GLNKVPILLPEAT---------------------TELRLEQNDITELPPKAFANYKRLRR 152
L +PI + E +L L N I + PKAF RL
Sbjct: 513 SLENLPIFVTELKLRDNEIMRIENSGVFAKLGNLQKLDLRNNRIERIAPKAFEGAARLTD 572
Query: 153 IDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLR------------- 199
+ L++N++ + F GL++L +L L N +T + + F +L LR
Sbjct: 573 LQLTENRLKSLDGSMFVGLRNLKTLMLRTNKITCIKNSTFVDLDNLRLLSLYDNQIRCIQ 632
Query: 200 -----------TLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
TL + N F C+CHL WL WL++ + +CF+P + I D+
Sbjct: 633 PGSFDRLKFLSTLNLLSNPFNCNCHLRWLGDWLRKRAIVTGNPRCFSPQMLHDLPIQDLK 692
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
++FKC S+ E +C +D ++ C + CP C C+ +V C
Sbjct: 693 TNDFKCEVSN-EVGCHPSSPKCCSD-------EIDGEGNSCDSRAYCPPDCTCSGTVVRC 744
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYI-SNNFKRWTNRSRRLEQNDITEL 367
K L++VP +P TTEL Y+ SN + W
Sbjct: 745 SGKKLHEVPRDIPFDTTEL----------------YLDSNQIEEW--------------- 773
Query: 368 PPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
P+ K+L RI N + LP + F N +L
Sbjct: 774 -PRELLRLKKLTRIDFSNNKLVSLPSQIFVNLTQL 807
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 97/223 (43%), Gaps = 41/223 (18%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + + G F L L TL + N F C+CHL WL WL++ + +CF+P
Sbjct: 622 SLYDNQIRCIQPGSFDRLKFLSTLNLLSNPFNCNCHLRWLGDWLRKRAIVTGNPRCFSPQ 681
Query: 64 HIKGQNILDIPEHEFKC----------------SGPVEKPTGECAAEPSCPHPCRCADGI 107
+ I D+ ++FKC S ++ C + CP C C+ +
Sbjct: 682 MLHDLPIQDLKTNDFKCEVSNEVGCHPSSPKCCSDEIDGEGNSCDSRAYCPPDCTCSGTV 741
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
V C K L++VP +P TTEL L+ N I E P + L R
Sbjct: 742 VRCSGKKLHEVPRDIPFDTTELYLDSNQIEEWP-------RELLR--------------- 779
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFIC 210
LK LT + +NN L LP +F L +L TL +S N C
Sbjct: 780 ---LKKLTRIDFSNNKLVSLPSQIFVNLTQLSTLILSYNKLQC 819
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 16/116 (13%)
Query: 295 CPHPCRCADGIVDCREKGLNKVPILLPEATTELTY----MVSIDRVDKVLLYSYISNNFK 350
CP C C +DC + L VP +P+ L + I R D F+
Sbjct: 20 CPQECVCQGASLDCSYRSLKHVPPHIPKDVERLDLQGNNLTVIRRKD-----------FQ 68
Query: 351 RWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R +L N+IT + AF + + R+RL +N + +LP FAN +L R+
Sbjct: 69 GLKNLRILQLLDNEITSIERNAFDDMHSMERLRLNRNKLQQLPDNLFANMPKLYRL 124
>gi|410914413|ref|XP_003970682.1| PREDICTED: slit homolog 3 protein-like [Takifugu rubripes]
Length = 1900
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 151/452 (33%), Positives = 219/452 (48%), Gaps = 77/452 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRTLR+ N+ CDCHLSWL WL+ L +T+C AP+
Sbjct: 185 TLNNNNITLIPLSSFNHMPKLRTLRLHSNNLHCDCHLSWLSDWLRARRGLAPFTQCMAPA 244
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPS-CPHPCRCADGIVDCREKGLNKVPILL 122
H++G N+ D+ + +F C+GPV C + + CP C C + IVDCR KGL ++P L
Sbjct: 245 HMRGLNVPDVQKKDFVCNGPVLTEPRTCVPQVAVCPPSCTCNNNIVDCRRKGLAEIPSNL 304
Query: 123 PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLT------- 175
PE E+RLEQN I +P AF+ YK+L+RIDLSKNQIS +A DAF GL+SLT
Sbjct: 305 PEGIVEIRLEQNLIKSVPAGAFSAYKKLKRIDLSKNQISDIAADAFNGLRSLTSLVLYGN 364
Query: 176 -----------------S------------------------LTLNNNNLTYLPDGVFAE 194
L+L +N L + G+FA
Sbjct: 365 KITELPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAP 424
Query: 195 LFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
L ++TL +++N F+CDCHL WL +L P +C P + + I + +F+C
Sbjct: 425 LRSIKTLHLAQNPFMCDCHLKWLADYLFDNPIETSGARCSHPRRLANKRISQVKGKKFRC 484
Query: 255 SGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLN 314
+G + RS++ GEC + CP CRC +VDC L
Sbjct: 485 TGQE-DYRSRL--------------------NGECFQDLVCPEKCRCEGTVVDCSNLKLT 523
Query: 315 KVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFA 373
+VP +PE TT+L D ++ + FK+ N R L N + ++ AF
Sbjct: 524 RVPPHVPEHTTDLRLN------DNEIVVLEATGLFKKLPNLRKINLSNNKLRDIREGAFD 577
Query: 374 NYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L N +T L + F L+ +
Sbjct: 578 GASGVLELLLTGNKLTGLQGRMFRGLSGLKTL 609
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 133/471 (28%), Positives = 201/471 (42%), Gaps = 96/471 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L P +C P
Sbjct: 408 SLYDNKLQTISKGLFAPLRSIKTLHLAQNPFMCDCHLKWLADYLFDNPIETSGARCSHPR 467
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I + +F+C+G + + GEC + CP CRC +VDC L +VP
Sbjct: 468 RLANKRISQVKGKKFRCTGQEDYRSRLNGECFQDLVCPEKCRCEGTVVDCSNLKLTRVPP 527
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLS----------------------- 156
+PE TT+LRL N+I L F LR+I+LS
Sbjct: 528 HVPEHTTDLRLNDNEIVVLEATGLFKKLPNLRKINLSNNKLRDIREGAFDGASGVLELLL 587
Query: 157 -------------------------KNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGV 191
NQIS + F GL S+ L+L +N ++ + G
Sbjct: 588 TGNKLTGLQGRMFRGLSGLKTLMLRSNQISCIDNSTFTGLSSVRLLSLYDNRISSIAPGA 647
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F+ L L T+ + N ++CDCHL+WL +WLK+ + +C P+ +K I D+ +
Sbjct: 648 FSTLHSLSTINLLSNPYVCDCHLAWLGQWLKKTRVVSGNPRCQKPAFLKEIPIQDVATPD 707
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G ME C CP C C+D +V C +
Sbjct: 708 FTCDG--MEDNG-------------------------CLPASGCPDACTCSDSVVRCSNR 740
Query: 312 GLNKVPILLPEATTEL----TYMVSIDR---VDKVLLYSYISNN---------FKRWTNR 355
GL+ +P +P+ TTEL + S+ + K L +SNN F T
Sbjct: 741 GLHSLPKGIPKDTTELYLEGNMLTSVPKELSGLKQLSLVDLSNNSISTLAPFTFSNMTQL 800
Query: 356 SRR-LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L N I +P AF K LR + L ND++ +P AF + L +
Sbjct: 801 ATLILSYNQIRCIPVHAFDGLKALRLLTLHGNDLSTIPEGAFNHLTSLSHL 851
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/278 (33%), Positives = 135/278 (48%), Gaps = 55/278 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L N IS + AF+ L+ L LTLNNNN+T +P
Sbjct: 136 LDLSENQIQAIPRKAFRGITSVKNLQLDSNHISCIEDGAFRALRDLEILTLNNNNITLIP 195
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRTLR+ N+ CDCHLSWL WL+ L +T+C AP+H++G N+ D+
Sbjct: 196 LSSFNHMPKLRTLRLHSNNLHCDCHLSWLSDWLRARRGLAPFTQCMAPAHMRGLNVPDVQ 255
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPS-CPHPCRCADGIVD 307
+ +F C+G PV C + + CP C C + IVD
Sbjct: 256 KKDFVCNG------------------------PVLTEPRTCVPQVAVCPPSCTCNNNIVD 291
Query: 308 CREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITEL 367
CR KGL ++P LPE E+ RLEQN I +
Sbjct: 292 CRRKGLAEIPSNLPEGIVEI------------------------------RLEQNLIKSV 321
Query: 368 PPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+L+RI L +N I+++ AF + L +
Sbjct: 322 PAGAFSAYKKLKRIDLSKNQISDIAADAFNGLRSLTSL 359
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 139/276 (50%), Gaps = 26/276 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N ++ + G F+ L L T+ + N ++CDCHL+WL +WLK+ + +C P+
Sbjct: 634 SLYDNRISSIAPGAFSTLHSLSTINLLSNPYVCDCHLAWLGQWLKKTRVVSGNPRCQKPA 693
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G + C CP C C+D +V C +GL+ +P +P
Sbjct: 694 FLKEIPIQDVATPDFTCDGMEDNG---CLPASGCPDACTCSDSVVRCSNRGLHSLPKGIP 750
Query: 124 EATTELRLEQNDITELP-----------------------PKAFANYKRLRRIDLSKNQI 160
+ TTEL LE N +T +P P F+N +L + LS NQI
Sbjct: 751 KDTTELYLEGNMLTSVPKELSGLKQLSLVDLSNNSISTLAPFTFSNMTQLATLILSYNQI 810
Query: 161 SKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW 220
+ V AF GLK+L LTL+ N+L+ +P+G F L L L + N C+C + WL +W
Sbjct: 811 RCIPVHAFDGLKALRLLTLHGNDLSTIPEGAFNHLTSLSHLALGANPLYCNCEMRWLSQW 870
Query: 221 LKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
+K + +C P + + +L P ++F C G
Sbjct: 871 VKAGFKEPGIARCTGPPDMADRLLLTTPLNKFLCKG 906
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 58/136 (42%), Gaps = 19/136 (13%)
Query: 289 CAAEPS-CPHPCRCADGIVDCREKGLNKVPILLPEATTELTY----MVSIDRVD----KV 339
CAA S CPH C C+ VDC+ GL VP +P L + I +VD K
Sbjct: 25 CAASVSGCPHKCSCSGSHVDCQGLGLKTVPKGIPRNAERLDLNRNNITRITKVDFSGLKN 84
Query: 340 LLYSYISNNFKRWTNRS----------RRLEQNDITELPPKAFANYKRLRRIRLEQNDIT 389
L ++ +N R RL +N + LP F + +L R+ L +N I
Sbjct: 85 LRILHLEDNQISVVERGAFQDLRLLERLRLNRNKLQVLPELLFQSNPKLGRLDLSENQIQ 144
Query: 390 ELPPKAFANYKRLRRM 405
+P KAF ++ +
Sbjct: 145 AIPRKAFRGITSVKNL 160
>gi|354468253|ref|XP_003496581.1| PREDICTED: slit homolog 3 protein [Cricetulus griseus]
Length = 1434
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 154/474 (32%), Positives = 215/474 (45%), Gaps = 124/474 (26%)
Query: 5 LNNNNLTYLPDGVFAELF------------------------RLRTLRISENSFICDCHL 40
L+NN+++ + DG F L ++RTLR+ N CDCHL
Sbjct: 123 LDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHL 182
Query: 41 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHP 100
+WL WL++ +G +T C AP H++G N+ D+ + E+ C GP + A SCP
Sbjct: 183 AWLSDWLRQRRTVGQFTLCMAPVHLRGFNVADVQKKEYVCPGPHAEAPSCNANSLSCPSA 242
Query: 101 CRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQI 160
C C++ IVDCR KGL ++P LPE+ E+RLEQN I +P AF YK+L+RID+SKNQI
Sbjct: 243 CTCSNNIVDCRGKGLTEIPANLPESIVEIRLEQNAIKSIPAGAFTQYKKLKRIDISKNQI 302
Query: 161 SKVAVDAFQGLKSLTSLTLNNNNLTYLP-------------------------------- 188
S +A DAFQGLKSLTSL L N +T +P
Sbjct: 303 SDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQ 362
Query: 189 ----------------DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTK 232
G+FA L ++TL +++N F+CDCHL WL +L+ P +
Sbjct: 363 NLNLLSLYDNKLQTVSKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGAR 422
Query: 233 CFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAE 292
C +P + + I I +F+CSG S+ YR + EC +
Sbjct: 423 CSSPRRLANKRISQIKSKKFRCSG------SEDYRNRFGS---------------ECFMD 461
Query: 293 PSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRW 352
CP CRC IVDC + L ++P LPE TT+L
Sbjct: 462 LVCPEKCRCEGTIVDCSNQKLARIPSHLPEYTTDL------------------------- 496
Query: 353 TNRSRRLEQNDITELPPKA-FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RL NDI+ L F LR+I L N I E+ AF ++ +
Sbjct: 497 -----RLNDNDISVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQEL 545
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 133/461 (28%), Positives = 204/461 (44%), Gaps = 86/461 (18%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 368 SLYDNKLQTVSKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 427
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + + EC + CP CRC IVDC + L ++P
Sbjct: 428 RLANKRISQIKSKKFRCSGSEDYRNRFGSECFMDLVCPEKCRCEGTIVDCSNQKLARIPS 487
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQI------------------- 160
LPE TT+LRL NDI+ L F LR+I+LS N+I
Sbjct: 488 HLPEYTTDLRLNDNDISVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELML 547
Query: 161 -------------------SKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTL 201
S V D F GL S+ L+L +N +T + G F L L T+
Sbjct: 548 TGNQLETRHGGVMLRSNLISCVNNDTFTGLSSVRLLSLYDNRITTITPGAFTTLVSLSTI 607
Query: 202 RISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMET 261
+ N F C+CHL+WL RWL++ + +C P +K I D+ +F C G+
Sbjct: 608 NLLSNPFNCNCHLAWLGRWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCDGN---- 663
Query: 262 RSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 321
EE S C P CP C C + +V C +GL +P +P
Sbjct: 664 ------EESS-----------------CQLSPRCPEQCTCVETVVRCSNRGLRALPKGMP 700
Query: 322 EATTEL----TYMVSIDR----VDKVLLYSYISNNFKRWTNRSRR---------LEQNDI 364
+ TEL ++ S+ + + ++ L +N+ TN + L N +
Sbjct: 701 KDVTELYLEGNHLTSVPKELSALRQLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRL 760
Query: 365 TELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+P AF + LR + L NDI+ +P +F + L +
Sbjct: 761 RCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHL 801
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 144/294 (48%), Gaps = 57/294 (19%)
Query: 115 LNKVPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL ++T T L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 80 LQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRAL 139
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T
Sbjct: 140 RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFT 199
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
C AP H++G N+ D+ + E+ C G E S C+ A
Sbjct: 200 LCMAPVHLRGFNVADVQKKEYVCPGPHAEAPS------CN------------------AN 235
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++ IVDCR KGL ++P LPE+ E+
Sbjct: 236 SLSCPSACTCSNNIVDCRGKGLTEIPANLPESIVEI------------------------ 271
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF YK+L+RI + +N I+++ P AF K L +
Sbjct: 272 ------RLEQNAIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 319
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 135/277 (48%), Gaps = 28/277 (10%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CHL+WL RWL++ + +C P
Sbjct: 584 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGRWLRKRRIVSGNPRCQKPF 643
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C + +V C +GL +P +P
Sbjct: 644 FLKEIPIQDVAIQDFTCDGNEES---SCQLSPRCPEQCTCVETVVRCSNRGLRALPKGMP 700
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISK--------------------- 162
+ TEL LE N +T +P K + ++L IDLS N IS
Sbjct: 701 KDVTELYLEGNHLTSVP-KELSALRQLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNR 759
Query: 163 ---VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
+ V AF GL+SL LTL+ N+++ +P+G F +L L L + N CDC L WL
Sbjct: 760 LRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSE 819
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C +P + + +L P H F+C G
Sbjct: 820 WVKDGYKEPGIARCSSPESLADRLLLTTPTHRFQCKG 856
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%)
Query: 120 ILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTL 179
I L + L++N+IT + FA K LR + L NQ+S + AFQ LK L L L
Sbjct: 16 IFLAGGVSWSDLDRNNITRITKMDFAGLKNLRVLLLEDNQVSIIERGAFQDLKQLERLRL 75
Query: 180 NNNNLTYLPDGVFAELFRLRTLRISENSF 208
N N L LP+ +F +L L +SEN
Sbjct: 76 NKNKLQVLPELLFQSTPKLTRLDLSENQI 104
>gi|351701154|gb|EHB04073.1| Slit-like protein 3 protein [Heterocephalus glaber]
Length = 1384
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 149/451 (33%), Positives = 210/451 (46%), Gaps = 88/451 (19%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 85 TLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFTLCMAPV 144
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ D+ + E+ C GP + A SCP C C++ IVDCR KGL ++P LP
Sbjct: 145 HLRGFNVADVQKKEYVCPGPHSEAPACNANSLSCPSTCTCSNNIVDCRGKGLTEIPANLP 204
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLK LTSL L N
Sbjct: 205 EGIIEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKGLTSLVLYGNK 264
Query: 184 LT------------------------------------------------YLPDGVFAEL 195
+T + G+FA L
Sbjct: 265 ITEIAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPL 324
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N F+CDCHL WL +L+ P +C +P + + I I +F+CS
Sbjct: 325 QSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLTNKRISQIKSKKFRCS 384
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
G + CP CRC IVDC + L +
Sbjct: 385 G---------------------------------FMDLMCPEKCRCEGTIVDCSNQKLAR 411
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
VP LPE T+L D VL + I FK+ N R L N I E+ AF
Sbjct: 412 VPSHLPEYVTDLRLN---DNDISVLEATSI---FKKLPNLRKINLSNNKIKEVREGAFEG 465
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ + L N + + + F L+ +
Sbjct: 466 AAGVQELMLTGNQLESVQGRVFRGLSGLKTL 496
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/455 (27%), Positives = 193/455 (42%), Gaps = 100/455 (21%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 307 SLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 366
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+ + I I +F+CSG ++ CP CRC IVDC + L +VP LP
Sbjct: 367 RLTNKRISQIKSKKFRCSGFMDL---------MCPEKCRCEGTIVDCSNQKLARVPSHLP 417
Query: 124 EATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG------------ 170
E T+LRL NDI+ L + F LR+I+LS N+I +V AF+G
Sbjct: 418 EYVTDLRLNDNDISVLEATSIFKKLPNLRKINLSNNKIKEVREGAFEGAAGVQELMLTGN 477
Query: 171 ------------LKSLTS------------------------LTLNNNNLTYLPDGVFAE 194
L L + L+L +N +T + G F
Sbjct: 478 QLESVQGRVFRGLSGLKTLMLRSNMISCVNNDTFAGLSSVRLLSLYDNRITTITPGAFIT 537
Query: 195 LFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
L L T+ + N F C+CHL+WL +WL++ + +C P +K I D+ +F C
Sbjct: 538 LVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVASQDFTC 597
Query: 255 SGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLN 314
G+ + C P CP C C D +V C KGL
Sbjct: 598 DGNDESS---------------------------CQLSPRCPEQCTCVDTVVRCSNKGLR 630
Query: 315 KVPILLPEATTEL----TYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPK 370
+P +P+ TEL ++ ++ R L + + L N + +P
Sbjct: 631 SLPKGMPKDATELYLEGNHLTAVPRELSALRHLTL-----------MILSYNRLRCIPIH 679
Query: 371 AFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
AF + LR + L NDI+ +P +F + L +
Sbjct: 680 AFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHL 714
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 142/296 (47%), Gaps = 60/296 (20%)
Query: 116 NKVPILLPEATTELR------LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ 169
N+V I+ A +L+ L +N I +P KAF ++ + L N IS + AF+
Sbjct: 17 NQVSIIERGAFQDLKQLERLDLSENQIQGIPRKAFRGIADVKNLQLDNNHISCIEDGAFR 76
Query: 170 GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGL 229
L+ L LTLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G
Sbjct: 77 ALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQ 136
Query: 230 YTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGEC 289
+T C AP H++G N+ D+ + E+ C G P++ P
Sbjct: 137 FTLCMAPVHLRGFNVADVQKKEYVCPG-------------------PHSEAPACN----- 172
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNF 349
A SCP C C++ IVDCR KGL ++P LPE E+
Sbjct: 173 ANSLSCPSTCTCSNNIVDCRGKGLTEIPANLPEGIIEI---------------------- 210
Query: 350 KRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF YK+L+RI + +N I+++ P AF K L +
Sbjct: 211 --------RLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKGLTSL 258
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 133/253 (52%), Gaps = 4/253 (1%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CHL+WL +WL++ + +C P
Sbjct: 521 SLYDNRITTITPGAFITLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPF 580
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C D +V C KGL +P +P
Sbjct: 581 FLKEIPIQDVASQDFTCDGNDES---SCQLSPRCPEQCTCVDTVVRCSNKGLRSLPKGMP 637
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TEL LE N +T +P + + + L + LS N++ + + AF GL+SL LTL+ N+
Sbjct: 638 KDATELYLEGNHLTAVP-RELSALRHLTLMILSYNRLRCIPIHAFNGLRSLRVLTLHGND 696
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
++ +P+G F +L L L + N CDC L WL W+K + +C +P + +
Sbjct: 697 ISSVPEGSFNDLTSLSHLALGTNPLHCDCRLRWLSEWVKAGYKEPGIARCSSPESMADRL 756
Query: 244 ILDIPEHEFKCSG 256
+L P H F+C G
Sbjct: 757 LLTTPTHRFQCKG 769
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TL+ N+++ +P+G F +L L L + N CDC L WL W+K + +C +P
Sbjct: 691 TLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCRLRWLSEWVKAGYKEPGIARCSSPE 750
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ + +L P H F+C GPV+
Sbjct: 751 SMADRLLLTTPTHRFQCKGPVD 772
>gi|348575197|ref|XP_003473376.1| PREDICTED: slit homolog 3 protein [Cavia porcellus]
Length = 1523
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 153/474 (32%), Positives = 221/474 (46%), Gaps = 100/474 (21%)
Query: 5 LNNNNLTYLPDGVFAELF------------------------RLRTLRISENSFICDCHL 40
L+NN+++ + DG F L ++RTLR+ N CDCHL
Sbjct: 164 LDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHL 223
Query: 41 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHP 100
+WL WL++ +G +T C AP H++G N+ D+ + E+ C GP + A SCP
Sbjct: 224 AWLSDWLRQRRTIGQFTLCMAPVHLRGFNVADVQKKEYVCPGPHSEAPSCNANSLSCPSS 283
Query: 101 CRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQI 160
C C++ IVDCR KGL ++P LPE+ E+RLEQN I +P AF YK+L+RID+SKNQI
Sbjct: 284 CTCSNNIVDCRGKGLTEIPANLPESIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQI 343
Query: 161 SKVAVDAFQGLKSLTSLTLNNNNLT----------------------------------- 185
S +A DAFQGLKSLTSL L N +T
Sbjct: 344 SDIAPDAFQGLKSLTSLVLYGNKITEIAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQ 403
Query: 186 -------------YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTK 232
+ G+FA L ++TL +++N F+CDCHL WL +L+ P +
Sbjct: 404 NLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGAR 463
Query: 233 CFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAE 292
C +P + + I I +F+CSG+ + RS+ + EC +
Sbjct: 464 CSSPRRLANKRISQIKSKKFRCSGTE-DYRSRF--------------------SSECFMD 502
Query: 293 PSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRW 352
CP CRC IVDC + L ++P LPE T+L D VL + I FK+
Sbjct: 503 LVCPEKCRCEGTIVDCSNQKLARIPSHLPEYVTDLRLN---DNDISVLEATSI---FKKL 556
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R L N I E+ AF ++ + L N + + + F L+ +
Sbjct: 557 PNLRKINLSNNKIKEVREGAFDGAAGVQELMLTGNQLETVHGRMFRGLSGLKTL 610
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 131/471 (27%), Positives = 203/471 (43%), Gaps = 96/471 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 409 SLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 468
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + + + EC + CP CRC IVDC + L ++P
Sbjct: 469 RLANKRISQIKSKKFRCSGTEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLARIPS 528
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVDA--------- 167
LPE T+LRL NDI+ L + F LR+I+LS N+I +V A D
Sbjct: 529 HLPEYVTDLRLNDNDISVLEATSIFKKLPNLRKINLSNNKIKEVREGAFDGAAGVQELML 588
Query: 168 ------------FQGLKSLTS------------------------LTLNNNNLTYLPDGV 191
F+GL L + L+L +N +T + G
Sbjct: 589 TGNQLETVHGRMFRGLSGLKTLMLRSNMISCVNNDTFAGLSSVRLLSLYDNRITTITPGA 648
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L T+ + N F C+CHL+WL +WL++ + +C P +K I D+ +
Sbjct: 649 FTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQRPFFLKEIPIQDVASQD 708
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ + C P CP C C D +V C K
Sbjct: 709 FTCDGNDESS---------------------------CQLSPRCPEQCTCVDTVVRCSNK 741
Query: 312 GLNKVPILLPEATTEL----TYMVSIDRVDKVL----LYSYISNNFKRWTNRSRR----- 358
GL +P +P+ TEL ++ ++ R L L +N+ TN +
Sbjct: 742 GLRALPKGMPKDVTELYLEGNHLTAVPRELSALRHLTLIDLSNNSIGMLTNYTFSNMSHL 801
Query: 359 ----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P AF + LR + L NDI+ +P +F + L +
Sbjct: 802 STLILSYNRLRCIPIHAFNGLQSLRVLTLHGNDISSVPEGSFNDLTSLSHL 852
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 145/295 (49%), Gaps = 59/295 (20%)
Query: 115 LNKVPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL ++T T L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 121 LQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGIADVKNLQLDNNHISCIEDGAFRAL 180
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T
Sbjct: 181 RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFT 240
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
C AP H++G N+ D+ + E+ C G P++ P C A
Sbjct: 241 LCMAPVHLRGFNVADVQKKEYVCPG-------------------PHSEAP------SCNA 275
Query: 292 EP-SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFK 350
SCP C C++ IVDCR KGL ++P LPE+ E+
Sbjct: 276 NSLSCPSSCTCSNNIVDCRGKGLTEIPANLPESIVEI----------------------- 312
Query: 351 RWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF YK+L+RI + +N I+++ P AF K L +
Sbjct: 313 -------RLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 360
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 134/276 (48%), Gaps = 26/276 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CHL+WL +WL++ + +C P
Sbjct: 635 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQRPF 694
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C D +V C KGL +P +P
Sbjct: 695 FLKEIPIQDVASQDFTCDGNDES---SCQLSPRCPEQCTCVDTVVRCSNKGLRALPKGMP 751
Query: 124 EATTELRLEQNDITELPPK-----------------------AFANYKRLRRIDLSKNQI 160
+ TEL LE N +T +P + F+N L + LS N++
Sbjct: 752 KDVTELYLEGNHLTAVPRELSALRHLTLIDLSNNSIGMLTNYTFSNMSHLSTLILSYNRL 811
Query: 161 SKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW 220
+ + AF GL+SL LTL+ N+++ +P+G F +L L L + N CDC+L WL W
Sbjct: 812 RCIPIHAFNGLQSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCNLRWLSEW 871
Query: 221 LKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
+K + +C P + + +L P H F+C G
Sbjct: 872 VKAGYKEPGIARCSGPESMADRLLLTTPTHRFQCKG 907
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TL+ N+++ +P+G F +L L L + N CDC+L WL W+K + +C P
Sbjct: 829 TLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCNLRWLSEWVKAGYKEPGIARCSGPE 888
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ + +L P H F+C GPV+
Sbjct: 889 SMADRLLLTTPTHRFQCKGPVD 910
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTY-MVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ VDC GL VP +P L +I R+ K+ +F
Sbjct: 33 ACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKM--------DFAGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R LE N ++ + AF + K+L R+RL +N + LP F + +L R+
Sbjct: 85 KNLRVLHLEDNQVSIIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRL 138
>gi|347968568|ref|XP_312123.5| AGAP002792-PA [Anopheles gambiae str. PEST]
gi|333467944|gb|EAA07839.6| AGAP002792-PA [Anopheles gambiae str. PEST]
Length = 332
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 121/191 (63%), Positives = 140/191 (73%), Gaps = 2/191 (1%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T LP +FA + RLR LR+SEN F CDCHLSWL R+LK RL YT+C +P
Sbjct: 105 TLNNNNITTLPRDMFAGMPRLRALRLSENPFACDCHLSWLARYLKNASRLAPYTRCHSPG 164
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAA--EPSCPHPCRCADGIVDCREKGLNKVPIL 121
+KGQN+ D+ E +FKCSG E + + CPHPCRCADGIVDCREK LN VP
Sbjct: 165 QLKGQNVADLHEQDFKCSGKCADGQRERSVLIKVLCPHPCRCADGIVDCREKSLNTVPST 224
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
LPE TTELRLEQN ITE+PPKAFAN++RL+RIDLS N IS+VA DAF GLKSLTSL L
Sbjct: 225 LPEDTTELRLEQNYITEIPPKAFANHRRLKRIDLSNNNISRVAYDAFSGLKSLTSLVLYG 284
Query: 182 NNLTYLPDGVF 192
N + LP VF
Sbjct: 285 NKIKDLPASVF 295
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 121/277 (43%), Positives = 150/277 (54%), Gaps = 52/277 (18%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N +T +P +AF LR + L NQI+ + A +GL L LTLNNNN+T LP
Sbjct: 56 LDLSHNALTAVPKRAFKGAPALRSLQLDNNQITCLDEGAVKGLTELEILTLNNNNITTLP 115
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
+FA + RLR LR+SEN F CDCHLSWL R+LK RL YT+C +P +KGQN+ D+
Sbjct: 116 RDMFAGMPRLRALRLSENPFACDCHLSWLARYLKNASRLAPYTRCHSPGQLKGQNVADLH 175
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
E +FKCSG C + + CPHPCRCADGIVDC
Sbjct: 176 EQDFKCSG----------------------KCADGQRERSVLIKVLCPHPCRCADGIVDC 213
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
REK LN VP LPE TTEL RLEQN ITE+P
Sbjct: 214 REKSLNTVPSTLPEDTTEL------------------------------RLEQNYITEIP 243
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
PKAFAN++RL+RI L N+I+ + AF+ K L +
Sbjct: 244 PKAFANHRRLKRIDLSNNNISRVAYDAFSGLKSLTSL 280
>gi|344265714|ref|XP_003404927.1| PREDICTED: slit homolog 3 protein [Loxodonta africana]
Length = 1500
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 153/474 (32%), Positives = 219/474 (46%), Gaps = 100/474 (21%)
Query: 5 LNNNNLTYLPDGVFAELF------------------------RLRTLRISENSFICDCHL 40
L+NN+++ + DG F L ++RTLR+ N CDCHL
Sbjct: 164 LDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHL 223
Query: 41 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHP 100
+WL WL++ +G +T C AP ++G N+ D+ + E+ C GP + A SCP
Sbjct: 224 AWLSDWLRQRRTIGQFTLCMAPVQLRGFNVADVQKKEYVCPGPHSESPSCNANSLSCPSA 283
Query: 101 CRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQI 160
C C++ IVDCR KGL ++P LPE E+RLEQN I +P AF YK+L+RID+SKNQI
Sbjct: 284 CTCSNNIVDCRGKGLMEIPANLPEGIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQI 343
Query: 161 SKVAVDAFQGLKSLTSLTLNNNNLT----------------------------------- 185
S +A DAFQGLKSLTSL L N +T
Sbjct: 344 SDIAPDAFQGLKSLTSLVLYGNKITEIAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQ 403
Query: 186 -------------YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTK 232
+ G+FA L ++TL +++N F+CDCHL WL +L+ P +
Sbjct: 404 NLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGAR 463
Query: 233 CFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAE 292
C +P + + I I +F+CSGS + RS+ + EC +
Sbjct: 464 CSSPRRLANKRISQIKSKKFRCSGSE-DYRSRF--------------------SSECFMD 502
Query: 293 PSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRW 352
CP CRC IVDC + L ++P LPE T+L D VL + I FK+
Sbjct: 503 LVCPEKCRCEGTIVDCANQKLARIPSHLPEYVTDLRLN---DNDISVLEATGI---FKKL 556
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R L N I E+ AF ++ + L N + + + F L+ +
Sbjct: 557 PNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRMFRGLSGLKTL 610
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/454 (27%), Positives = 199/454 (43%), Gaps = 85/454 (18%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 409 SLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 468
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + + + EC + CP CRC IVDC + L ++P
Sbjct: 469 RLANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCANQKLARIPS 528
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVDA--------- 167
LPE T+LRL NDI+ L F LR+I+LS N+I +V A D
Sbjct: 529 HLPEYVTDLRLNDNDISVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELML 588
Query: 168 ------------FQGLKSLTS------------------------LTLNNNNLTYLPDGV 191
F+GL L + L+L +N +T + G
Sbjct: 589 TGNQLETVHGRMFRGLSGLKTLMLRSNLVSCVSNDTFAGLTSVRLLSLYDNRITTITPGA 648
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L T+ + N F C+C+L+WL +WL++ + +C P +K I D+ +
Sbjct: 649 FTTLVSLSTINLLSNPFNCNCYLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 708
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ + C P CP C C D +V C K
Sbjct: 709 FTCDGNDESS---------------------------CQLGPRCPEQCTCVDTVVRCSNK 741
Query: 312 GLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKA 371
GL +P +P+ TEL + +L +Y +N + + L N + +P A
Sbjct: 742 GLRTLPKGIPKDVTEL----DLSNNSISVLTNYTFSNMSHLS--TLILSYNRLRCIPVYA 795
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F+ + LR + L NDI+ +P +F + L +
Sbjct: 796 FSGLQSLRVLTLHGNDISSIPEGSFNDLTSLSHL 829
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 143/294 (48%), Gaps = 57/294 (19%)
Query: 115 LNKVPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL ++T T L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 121 LQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGIADVKNLQLDNNHISCIEDGAFRAL 180
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T
Sbjct: 181 RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFT 240
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
C AP ++G N+ D+ + E+ C G E+ S C+ A
Sbjct: 241 LCMAPVQLRGFNVADVQKKEYVCPGPHSESPS------CN------------------AN 276
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++ IVDCR KGL ++P LPE E+
Sbjct: 277 SLSCPSACTCSNNIVDCRGKGLMEIPANLPEGIVEI------------------------ 312
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF YK+L+RI + +N I+++ P AF K L +
Sbjct: 313 ------RLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 360
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 131/253 (51%), Gaps = 3/253 (1%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+C+L+WL +WL++ + +C P
Sbjct: 635 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCYLAWLGKWLRKRRIVSGNPRCQKPF 694
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C D +V C KGL +P +P
Sbjct: 695 FLKEIPIQDVAIQDFTCDGNDES---SCQLGPRCPEQCTCVDTVVRCSNKGLRTLPKGIP 751
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TEL L N I+ L F+N L + LS N++ + V AF GL+SL LTL+ N+
Sbjct: 752 KDVTELDLSNNSISVLTNYTFSNMSHLSTLILSYNRLRCIPVYAFSGLQSLRVLTLHGND 811
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
++ +P+G F +L L L + N CDC L WL W+K + +C +P + +
Sbjct: 812 ISSIPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSSPEPMADRL 871
Query: 244 ILDIPEHEFKCSG 256
+L P H F+C G
Sbjct: 872 LLTTPTHRFQCKG 884
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ VDC GL VP +P L +D+ + +F
Sbjct: 33 ACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLD-------LDRNNITRITKTDFAGLK 85
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R LE N ++ + AF + K+L R+RL +N + LP F + +L R+
Sbjct: 86 NLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRL 138
>gi|432877069|ref|XP_004073091.1| PREDICTED: slit homolog 3 protein-like [Oryzias latipes]
Length = 1533
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 150/452 (33%), Positives = 220/452 (48%), Gaps = 77/452 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRTLR+ N+ CDCHL+WL WL+ L +T+C +P+
Sbjct: 185 TLNNNNITLIPLSSFNHMPKLRTLRLHSNNLHCDCHLAWLSDWLRARRGLAPFTQCMSPA 244
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPS-CPHPCRCADGIVDCREKGLNKVPILL 122
H++G N+ D+ + +F CSGP + CAA+ S CP C C + IVDCR KGL ++P L
Sbjct: 245 HMRGLNVPDVQKKDFVCSGPPQTEPRTCAAQVSVCPPSCSCNNNIVDCRRKGLLEIPANL 304
Query: 123 PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLT------- 175
PE E+RLEQN I +P AF+ YK+L+RIDLSKNQIS +A DAF GL+SLT
Sbjct: 305 PEGIVEIRLEQNLIKSIPAGAFSPYKKLKRIDLSKNQISDIAADAFNGLRSLTSLVLYGN 364
Query: 176 -----------------S------------------------LTLNNNNLTYLPDGVFAE 194
L+L +N L + G+F
Sbjct: 365 KITELPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLSLLSLYDNKLQTISKGLFTP 424
Query: 195 LFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
L ++TL +++N F+CDCHL WL +L P +C P + + I + +F+C
Sbjct: 425 LRSIKTLHLAQNPFMCDCHLKWLADYLFDNPIETSGARCSHPRRLANKRISQVKGKKFRC 484
Query: 255 SGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLN 314
+G + RS++ +GEC + CP CRC +VDC L
Sbjct: 485 TGQE-DYRSRL--------------------SGECFQDLVCPEKCRCEGTVVDCSNLKLT 523
Query: 315 KVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFA 373
++P +PE TT+L ++ D L FK+ N R L N + E+ F
Sbjct: 524 RIPPHIPEYTTDL----RLNDNDITSLEGM--GTFKKLPNLRKINLSNNKLREIREGVFD 577
Query: 374 NYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L N +T + + F L+ +
Sbjct: 578 GAGGVLELLLTGNKLTAVHGRMFRGLSGLKTL 609
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 132/471 (28%), Positives = 198/471 (42%), Gaps = 96/471 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+F L ++TL +++N F+CDCHL WL +L P +C P
Sbjct: 408 SLYDNKLQTISKGLFTPLRSIKTLHLAQNPFMCDCHLKWLADYLFDNPIETSGARCSHPR 467
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I + +F+C+G + + +GEC + CP CRC +VDC L ++P
Sbjct: 468 RLANKRISQVKGKKFRCTGQEDYRSRLSGECFQDLVCPEKCRCEGTVVDCSNLKLTRIPP 527
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLS----------------------- 156
+PE TT+LRL NDIT L F LR+I+LS
Sbjct: 528 HIPEYTTDLRLNDNDITSLEGMGTFKKLPNLRKINLSNNKLREIREGVFDGAGGVLELLL 587
Query: 157 -------------------------KNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGV 191
NQIS + F GL S+ L+L +N + + G
Sbjct: 588 TGNKLTAVHGRMFRGLSGLKTLMLRSNQISCIDNSTFTGLSSVRLLSLYDNRIASIAPGA 647
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F+ L L T+ + N ++CDCHL+WL +WLK+ + +C P +K I D+ +
Sbjct: 648 FSTLHSLSTINLLSNPYVCDCHLAWLGQWLKKTRVVSGNPRCQKPPFLKEIPIQDVATPD 707
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C GS + C CP C C+D +V C +
Sbjct: 708 FTCDGSEDNS---------------------------CLPSSGCPDVCTCSDAVVRCSNR 740
Query: 312 GLNKVPILLPEATTEL----TYMVSIDR---VDKVLLYSYISNN---------FKRWTNR 355
GL +P +P+ TTEL + S+ + K L +SNN F T
Sbjct: 741 GLRSLPKGIPKDTTELYLEGNMLTSVPKELAALKQLSLVDLSNNSISTLAPYTFSNMTQL 800
Query: 356 SRR-LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L N I P AF K LR + L ND++ +P AF + L +
Sbjct: 801 ATLILSYNQIHCFPVHAFDGLKSLRLLTLHGNDLSTIPEGAFNHLTSLSHL 851
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 138/277 (49%), Gaps = 28/277 (10%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + + G F+ L L T+ + N ++CDCHL+WL +WLK+ + +C P
Sbjct: 634 SLYDNRIASIAPGAFSTLHSLSTINLLSNPYVCDCHLAWLGQWLKKTRVVSGNPRCQKPP 693
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G + C CP C C+D +V C +GL +P +P
Sbjct: 694 FLKEIPIQDVATPDFTCDGSEDN---SCLPSSGCPDVCTCSDAVVRCSNRGLRSLPKGIP 750
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVA------------------- 164
+ TTEL LE N +T +P K A K+L +DLS N IS +A
Sbjct: 751 KDTTELYLEGNMLTSVP-KELAALKQLSLVDLSNNSISTLAPYTFSNMTQLATLILSYNQ 809
Query: 165 -----VDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
V AF GLKSL LTL+ N+L+ +P+G F L L L + N C+C L WL +
Sbjct: 810 IHCFPVHAFDGLKSLRLLTLHGNDLSTIPEGAFNHLTSLSHLALGANPLYCNCDLRWLSQ 869
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P+ + + +L P + F+C G
Sbjct: 870 WVKAGFKEPGIARCTGPADMADRLLLTTPLNRFQCKG 906
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 145/295 (49%), Gaps = 58/295 (19%)
Query: 115 LNKVPILLPEATTELR---LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL ++ +L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 119 LQFLPELLFQSNPKLGRVDLSENQIQAVPRKAFRGITGVKNLQLDSNHISCIEDGAFRAL 178
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T +P F + +LRTLR+ N+ CDCHL+WL WL+ L +T
Sbjct: 179 RDLEILTLNNNNITLIPLSSFNHMPKLRTLRLHSNNLHCDCHLAWLSDWLRARRGLAPFT 238
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C +P+H++G N+ D+ + +F CSG P + CAA
Sbjct: 239 QCMSPAHMRGLNVPDVQKKDFVCSG------------------------PPQTEPRTCAA 274
Query: 292 EPS-CPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFK 350
+ S CP C C + IVDCR KGL ++P LPE E+
Sbjct: 275 QVSVCPPSCSCNNNIVDCRRKGLLEIPANLPEGIVEI----------------------- 311
Query: 351 RWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF+ YK+L+RI L +N I+++ AF + L +
Sbjct: 312 -------RLEQNLIKSIPAGAFSPYKKLKRIDLSKNQISDIAADAFNGLRSLTSL 359
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 30/105 (28%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
CPH C C+ VDC+ GL VP +P + +R+D
Sbjct: 31 GCPHKCSCSGSHVDCQGLGLKTVPKGVPR---------NAERLD---------------- 65
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFAN 398
L +N+IT + FA +K LR + LE N I+ + AF +
Sbjct: 66 -----LNRNNITRITKVDFAGFKNLRILHLEDNQISVIERGAFQD 105
>gi|149047250|gb|EDL99919.1| slit homolog 2 (Drosophila) [Rattus norvegicus]
Length = 1542
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 146/453 (32%), Positives = 221/453 (48%), Gaps = 78/453 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPT--GECAAEPSCPHPCRCADGIVDCREKGLNKVPIL 121
H++G N+ ++ + EF CSG + + + CP C C++ IVDCR KGL ++P
Sbjct: 241 HLRGHNVAEVQKREFVCSGKISHQSFMAPSCSVLHCPIACTCSNNIVDCRGKGLTEIPTN 300
Query: 122 LPEATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLSK 157
LPE TE+RLEQN I+EL P AF + L + L
Sbjct: 301 LPETITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYG 360
Query: 158 NQISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFA 193
N+I+++ VDAFQ L +L L+L +N L + G F+
Sbjct: 361 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFS 420
Query: 194 ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFK 253
L ++T+ +++N FICDCHL WL +L P +C +P + + I I +F+
Sbjct: 421 ALRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFR 480
Query: 254 CSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL 313
CSG+ + RSK+ +G+C A+ +CP CRC VDC + L
Sbjct: 481 CSGTE-DYRSKL--------------------SGDCFADLACPEKCRCEGTTVDCSNQKL 519
Query: 314 NKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAF 372
NK+P +P+ T EL ++ + +L + + FK+ R L N IT++ AF
Sbjct: 520 NKIPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINLSNNKITDIEEGAF 573
Query: 373 ANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ I L N + + K F + L+ +
Sbjct: 574 EGASGVNEILLTSNRLENVQHKMFKGLESLKTL 606
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 135/473 (28%), Positives = 204/473 (43%), Gaps = 99/473 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 405 SLYDNKLQTVAKGTFSALRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 464
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K +G+C A+ +CP CRC VDC + LNK+P
Sbjct: 465 RLANKRIGQIKSKKFRCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPD 524
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--------- 170
+P+ T ELRL N+ T L F +LR+I+LS N+I+ + AF+G
Sbjct: 525 HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGAFEGASGVNEILL 584
Query: 171 ---------------LKSLTS------------------------LTLNNNNLTYLPDGV 191
L+SL + L+L +N +T + G
Sbjct: 585 TSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFTGLGSVRLLSLYDNQITTVAPGA 644
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L TL + N F C+CHL+WL WL+R + +C P +K I D+ +
Sbjct: 645 FGTLHSLSTLNLLANPFNCNCHLAWLGEWLRRKRIVTGNPRCQKPYFLKEIPIQDVAIQD 704
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCADGIVDCRE 310
F C D + NSC P+ + CP C C D +V C
Sbjct: 705 FTCD-----------------DGNDDNSCSPLSR----------CPSECTCLDTVVRCSN 737
Query: 311 KGLNKVPILLPEATTELTYMVS---------IDRVDKVLLYSYISNNFKRWTNRSRR--- 358
KGL +P +P TEL Y+ + + L +N +N+S
Sbjct: 738 KGLKVLPKGIPRDVTEL-YLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMT 796
Query: 359 ------LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +PP+ F K LR + L NDI+ +P AF + L +
Sbjct: 797 QLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFGDLSALSHL 849
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 140/277 (50%), Gaps = 52/277 (18%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 132 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 191
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++
Sbjct: 192 VASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQ 251
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CSG + CS H CP C C++ IVDC
Sbjct: 252 KREFVCSGKI--SHQSFMAPSCSV-LH-------------------CPIACTCSNNIVDC 289
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 290 RGKGLTEIPTNLPETITEI------------------------------RLEQNSIRVIP 319
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRR+ L N I+EL P AF + L +
Sbjct: 320 PGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSL 356
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+CHL+WL WL+R + +C P
Sbjct: 631 SLYDNQITTVAPGAFGTLHSLSTLNLLANPFNCNCHLAWLGEWLRRKRIVTGNPRCQKPY 690
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 691 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPSECTCLDTVVRCSNKGLKVLPKGIP 748
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 749 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 807
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 808 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFGDLSALSHLAIGANPLYCDCNMQWLSD 867
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 868 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 904
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQ LK L L LN NNL P+ +F +L L +SEN
Sbjct: 83 VLQLMENKISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQI 139
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF + K L R+RL +N++ P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRL 132
>gi|281338998|gb|EFB14582.1| hypothetical protein PANDA_007155 [Ailuropoda melanoleuca]
Length = 1312
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 146/427 (34%), Positives = 204/427 (47%), Gaps = 76/427 (17%)
Query: 28 RISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGPVEKP 87
R+ N CDCHL+WL WL++ +G +T C AP H++G N+ D+ + E+ C GP +P
Sbjct: 1 RLHSNHLYCDCHLAWLSDWLRQRRTIGQFTLCMAPVHLRGFNVADVQKKEYVCPGPHSEP 60
Query: 88 TGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANY 147
A SCP C C++ IVDCR KGL ++P LPE E+RLEQN I +P AF Y
Sbjct: 61 PSCNANSISCPSACTCSNNIVDCRGKGLTEIPANLPEGIIEIRLEQNSIKSIPAGAFTQY 120
Query: 148 KRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP------------------- 188
K+L+RID+SKNQIS +A DAFQGLKSLTSL L N +T L
Sbjct: 121 KKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITELAKGLFDGLVSLQLLLLNANK 180
Query: 189 -----------------------------DGVFAELFRLRTLRISENSFICDCHLSWLHR 219
G+FA L ++TL +++N F+CDCHL WL
Sbjct: 181 INCLRVNTFQDLQNLSLLSLYDNKLQTISKGLFAPLQAIQTLHLAQNPFVCDCHLKWLAD 240
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
+L+ P +C +P + + I + +F+CSGS + RS+
Sbjct: 241 YLQDNPIETSGARCSSPRRLANKRIGQVKSKKFRCSGSE-DYRSRF-------------- 285
Query: 280 CPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKV 339
+ EC + CP CRC IVDC + L ++P LPE T+L D V
Sbjct: 286 ------SSECFMDLVCPERCRCEGTIVDCSNQKLARIPSHLPEYVTDLRLN---DNEISV 336
Query: 340 LLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFAN 398
L + I FK+ N R L N I E+ AF ++ + L N + L + F
Sbjct: 337 LEATGI---FKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETLHGRMFRG 393
Query: 399 YKRLRRM 405
L+ +
Sbjct: 394 LSSLKTL 400
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 125/471 (26%), Positives = 204/471 (43%), Gaps = 96/471 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 199 SLYDNKLQTISKGLFAPLQAIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 258
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I + +F+CSG + + + EC + CP CRC IVDC + L ++P
Sbjct: 259 RLANKRIGQVKSKKFRCSGSEDYRSRFSSECFMDLVCPERCRCEGTIVDCSNQKLARIPS 318
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISK----------------- 162
LPE T+LRL N+I+ L F LR+I+LS N+I +
Sbjct: 319 HLPEYVTDLRLNDNEISVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELML 378
Query: 163 -------------------------------VAVDAFQGLKSLTSLTLNNNNLTYLPDGV 191
V+ D F GL S+ L+L +N +T + G
Sbjct: 379 TGNQLETLHGRMFRGLSSLKTLMLRSNLINCVSNDTFAGLSSVRLLSLYDNRITTITPGA 438
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L T+ + N F C+CHL+WL +WL++ + +C P +K I D+ +
Sbjct: 439 FTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRVVSGNPRCQKPFFLKEIPIQDVAIQD 498
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ + C P CP C C + +V C +
Sbjct: 499 FTCEGNDESS---------------------------CQLGPRCPEQCTCVETVVRCSNR 531
Query: 312 GLNKVPILLPEATTEL----TYMVSIDR----VDKVLLYSYISNNFKRWTNRSRR----- 358
GL+ +P +P+ TEL ++ ++ R + + L +N+ TN +
Sbjct: 532 GLHALPKGIPKDVTELYLEGNHLTAVPRELSTLRHLTLIDLSNNSIGVLTNYTFSNMSHL 591
Query: 359 ----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P AF + LR + L NDI+ +P +F++ L +
Sbjct: 592 STLILSYNRLRCIPVHAFDGLRSLRVLTLHGNDISSVPEGSFSDLTSLSHL 642
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 136/276 (49%), Gaps = 26/276 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CHL+WL +WL++ + +C P
Sbjct: 425 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRVVSGNPRCQKPF 484
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C + +V C +GL+ +P +P
Sbjct: 485 FLKEIPIQDVAIQDFTCEGNDES---SCQLGPRCPEQCTCVETVVRCSNRGLHALPKGIP 541
Query: 124 EATTELRLEQNDITELPPK-----------------------AFANYKRLRRIDLSKNQI 160
+ TEL LE N +T +P + F+N L + LS N++
Sbjct: 542 KDVTELYLEGNHLTAVPRELSTLRHLTLIDLSNNSIGVLTNYTFSNMSHLSTLILSYNRL 601
Query: 161 SKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW 220
+ V AF GL+SL LTL+ N+++ +P+G F++L L L + N CDC L WL W
Sbjct: 602 RCIPVHAFDGLRSLRVLTLHGNDISSVPEGSFSDLTSLSHLALGTNPLHCDCGLRWLSEW 661
Query: 221 LKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
+K + +C +P + + +L P H F+C G
Sbjct: 662 VKAGYKEPGIARCSSPESMADRLLLTTPTHRFQCKG 697
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 15/118 (12%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TL+ N+++ +P+G F++L L L + N CDC L WL W+K + +C +P
Sbjct: 619 TLHGNDISSVPEGSFSDLTSLSHLALGTNPLHCDCGLRWLSEWVKAGYKEPGIARCSSPE 678
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------------KPTGECAAEPSCPHPCRCADG 106
+ + +L P H F+C GPV+ K G C+ +P + C C G
Sbjct: 679 SMADRLLLTTPTHRFQCKGPVDINIVAKCNGCVSSPCKNNGTCSQDPVELYRCTCPYG 736
>gi|166064058|ref|NP_848919.3| slit homolog 2 protein precursor [Mus musculus]
gi|341942040|sp|Q9R1B9.2|SLIT2_MOUSE RecName: Full=Slit homolog 2 protein; Short=Slit-2; Contains:
RecName: Full=Slit homolog 2 protein N-product;
Contains: RecName: Full=Slit homolog 2 protein
C-product; Flags: Precursor
Length = 1521
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 146/451 (32%), Positives = 219/451 (48%), Gaps = 77/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + EF CSG C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 241 HLRGHNVAEVQKREFVCSGHQSFMAPSCSV-LHCPAACTCSNNIVDCRGKGLTEIPTNLP 299
Query: 124 EATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I+EL P AF + L + L N+
Sbjct: 300 ETITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNK 359
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+++ VDAFQ L +L L+L +N L + G F+ L
Sbjct: 360 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSAL 419
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 420 RAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 479
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
G+ + RSK+ +G+C A+ +CP CRC VDC + LNK
Sbjct: 480 GTE-DYRSKL--------------------SGDCFADLACPEKCRCEGTTVDCSNQRLNK 518
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P +P+ T EL ++ + +L + + FK+ R N IT++ AF
Sbjct: 519 IPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGAFEG 572
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ I L N + + K F + L+ +
Sbjct: 573 ASGVNEILLTSNRLENVQHKMFKGLESLKTL 603
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 139/277 (50%), Gaps = 55/277 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 132 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 191
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++
Sbjct: 192 VASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQ 251
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CSG CS H CP C C++ IVDC
Sbjct: 252 KREFVCSG-----HQSFMAPSCSV-LH-------------------CPAACTCSNNIVDC 286
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 287 RGKGLTEIPTNLPETITEI------------------------------RLEQNSIRVIP 316
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRR+ L N I+EL P AF + L +
Sbjct: 317 PGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSL 353
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 134/455 (29%), Positives = 204/455 (44%), Gaps = 87/455 (19%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 402 SLYDNKLQTVAKGTFSALRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 461
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K +G+C A+ +CP CRC VDC + LNK+P
Sbjct: 462 RLANKRIGQIKSKKFRCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQRLNKIPD 521
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--------- 170
+P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 522 HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILL 581
Query: 171 ---------------LKSLTS------------------------LTLNNNNLTYLPDGV 191
L+SL + L+L +N +T + G
Sbjct: 582 TSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLGSVRLLSLYDNQITTVAPGA 641
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L TL + N F C+CHL+WL WL+R + +C P +K I D+ +
Sbjct: 642 FDSLHSLSTLNLLANPFNCNCHLAWLGEWLRRKRIVTGNPRCQKPYFLKEIPIQDVAIQD 701
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCADGIVDCRE 310
F C D + NSC P+ + CP C C D +V C
Sbjct: 702 FTCD-----------------DGNDDNSCSPLSR----------CPSECTCLDTVVRCSN 734
Query: 311 KGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPK 370
KGL +P +P+ TEL +D L+ +S N+K T L N I+ L +
Sbjct: 735 KGLKVLPKGIPKDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNNRISTLSNQ 787
Query: 371 AFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+F+N +L + L N + +PP+ F K LR +
Sbjct: 788 SFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 822
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 134/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+CHL+WL WL+R + +C P
Sbjct: 628 SLYDNQITTVAPGAFDSLHSLSTLNLLANPFNCNCHLAWLGEWLRRKRIVTGNPRCQKPY 687
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 688 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPSECTCLDTVVRCSNKGLKVLPKGIP 745
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
+ TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 746 KDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 804
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 805 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 864
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 865 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 901
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKIDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQ LK L L LN NNL P+ +F +L L +SEN
Sbjct: 83 VLQLMENRISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQI 139
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K+ +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKI--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF + K L R+RL +N++ P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENRISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRL 132
>gi|403271197|ref|XP_003927523.1| PREDICTED: slit homolog 2 protein isoform 4 [Saimiri boliviensis
boliviensis]
Length = 1520
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 146/451 (32%), Positives = 219/451 (48%), Gaps = 77/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + EF CSG C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 241 HLRGHNVAEVQKREFVCSGHQSFMAPSCSV-LHCPAACTCSNNIVDCRGKGLTEIPTNLP 299
Query: 124 EATTELRLEQNDI------------------------TELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I +EL P AF + L + L N+
Sbjct: 300 ETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 359
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+++ VDAFQ L +L L+L +N L + G F+ L
Sbjct: 360 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 419
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 420 RAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 479
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
G+ + RSK+ +G+C A+ +CP CRC VDC + LNK
Sbjct: 480 GTE-DYRSKL--------------------SGDCFADLACPEKCRCEGTTVDCSNQKLNK 518
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P +P+ T EL ++ + +L + + FK+ R N IT++ AF
Sbjct: 519 IPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGAFEG 572
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ I L N + + K F + L+ +
Sbjct: 573 ASGVNEILLTSNRLENVQHKMFKGLESLKTL 603
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 139/277 (50%), Gaps = 55/277 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 132 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 191
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++
Sbjct: 192 VASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQ 251
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CSG CS H CP C C++ IVDC
Sbjct: 252 KREFVCSG-----HQSFMAPSCSV-LH-------------------CPAACTCSNNIVDC 286
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 287 RGKGLTEIPTNLPETITEI------------------------------RLEQNSIKVIP 316
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 317 PGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 353
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 131/454 (28%), Positives = 201/454 (44%), Gaps = 85/454 (18%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 402 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 461
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K +G+C A+ +CP CRC VDC + LNK+P
Sbjct: 462 RLANKRIGQIKSKKFRCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPD 521
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--------- 170
+P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 522 HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILL 581
Query: 171 ---------------LKSLTS------------------------LTLNNNNLTYLPDGV 191
L+SL + L+L +N +T + G
Sbjct: 582 TSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQITTVAPGA 641
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L TL + N F C+C+L+WL WL++ + +C P +K I D+ +
Sbjct: 642 FDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQD 701
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C D + NS C+ CP C C D +V C K
Sbjct: 702 FTCD-----------------DGNDDNS---------CSPHSRCPTECTCLDTVVRCSNK 735
Query: 312 GLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKA 371
GL +P +P TEL +D L+ +S N+K T L N I+ L ++
Sbjct: 736 GLKVLPKGIPRDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNNRISTLSNQS 788
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F+N +L + L N + +PP+ F K LR +
Sbjct: 789 FSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 822
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 628 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 687
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 688 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPHSRCPTECTCLDTVVRCSNKGLKVLPKGIP 745
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 746 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 804
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 805 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 864
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 865 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 901
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQ LK L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRLDLSENQI 139
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF + K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRL 132
>gi|148705685|gb|EDL37632.1| slit homolog 2 (Drosophila), isoform CRA_b [Mus musculus]
Length = 1543
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 146/451 (32%), Positives = 219/451 (48%), Gaps = 77/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + EF CSG C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 241 HLRGHNVAEVQKREFVCSGHQSFMAPSCSV-LHCPAACTCSNNIVDCRGKGLTEIPTNLP 299
Query: 124 EATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I+EL P AF + L + L N+
Sbjct: 300 ETITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNK 359
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+++ VDAFQ L +L L+L +N L + G F+ L
Sbjct: 360 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSAL 419
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 420 RAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 479
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
G+ + RSK+ +G+C A+ +CP CRC VDC + LNK
Sbjct: 480 GTE-DYRSKL--------------------SGDCFADLACPEKCRCEGTTVDCSNQRLNK 518
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P +P+ T EL ++ + +L + + FK+ R N IT++ AF
Sbjct: 519 IPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGAFEG 572
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ I L N + + K F + L+ +
Sbjct: 573 ASGVNEILLTSNRLENVQHKMFKGLESLKTL 603
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 139/277 (50%), Gaps = 55/277 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 132 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 191
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++
Sbjct: 192 VASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQ 251
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CSG CS H CP C C++ IVDC
Sbjct: 252 KREFVCSG-----HQSFMAPSCSV-LH-------------------CPAACTCSNNIVDC 286
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 287 RGKGLTEIPTNLPETITEI------------------------------RLEQNSIRVIP 316
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRR+ L N I+EL P AF + L +
Sbjct: 317 PGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSL 353
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/455 (29%), Positives = 204/455 (44%), Gaps = 87/455 (19%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 402 SLYDNKLQTVAKGTFSALRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 461
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K +G+C A+ +CP CRC VDC + LNK+P
Sbjct: 462 RLANKRIGQIKSKKFRCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQRLNKIPD 521
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--------- 170
+P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 522 HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILL 581
Query: 171 ---------------LKSLTS------------------------LTLNNNNLTYLPDGV 191
L+SL + L+L +N +T + G
Sbjct: 582 TSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLGSVRLLSLYDNQITTVAPGA 641
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L TL + N F C+CHL+WL WL+R + +C P +K I D+ +
Sbjct: 642 FDSLHSLSTLNLLANPFNCNCHLAWLGEWLRRKRIVTGNPRCQKPYFLKEIPIQDVAIQD 701
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCADGIVDCRE 310
F C D + NSC P+ + CP C C D +V C
Sbjct: 702 FTCD-----------------DGNDDNSCSPLSR----------CPSECTCLDTVVRCSN 734
Query: 311 KGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPK 370
KGL +P +P+ TEL +D L+ +S N+K T L N I+ L +
Sbjct: 735 KGLKVLPKGIPKDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNNRISTLSNQ 787
Query: 371 AFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+F+N +L + L N + +PP+ F K LR +
Sbjct: 788 SFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 822
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 134/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+CHL+WL WL+R + +C P
Sbjct: 628 SLYDNQITTVAPGAFDSLHSLSTLNLLANPFNCNCHLAWLGEWLRRKRIVTGNPRCQKPY 687
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 688 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPSECTCLDTVVRCSNKGLKVLPKGIP 745
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
+ TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 746 KDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 804
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 805 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 864
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 865 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 901
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKIDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQ LK L L LN NNL P+ +F +L L +SEN
Sbjct: 83 VLQLMENRISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQI 139
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K+ +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKI--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF + K L R+RL +N++ P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENRISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRL 132
>gi|397513113|ref|XP_003826869.1| PREDICTED: slit homolog 2 protein isoform 3 [Pan paniscus]
Length = 1521
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 146/451 (32%), Positives = 219/451 (48%), Gaps = 77/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + EF CSG C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 241 HLRGHNVAEVQKREFVCSGHQSFMAPSCSV-LHCPAACTCSNNIVDCRGKGLTEIPTNLP 299
Query: 124 EATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I+EL P AF + L + L N+
Sbjct: 300 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 359
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+++ VDAFQ L +L L+L +N L + G F+ L
Sbjct: 360 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 419
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 420 RAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 479
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
G+ + RSK+ +G+C A+ +CP CRC VDC + LNK
Sbjct: 480 GTE-DYRSKL--------------------SGDCFADLACPEKCRCEGTTVDCSNQKLNK 518
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P +P+ T EL ++ + +L + + FK+ R N IT++ AF
Sbjct: 519 IPEHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGAFEG 572
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ I L N + + K F + L+ +
Sbjct: 573 ASGVNEILLTSNRLENVQHKMFKGLESLKTL 603
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 139/277 (50%), Gaps = 55/277 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 132 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 191
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++
Sbjct: 192 VASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQ 251
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CSG CS H CP C C++ IVDC
Sbjct: 252 KREFVCSG-----HQSFMAPSCSV-LH-------------------CPAACTCSNNIVDC 286
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 287 RGKGLTEIPTNLPETITEI------------------------------RLEQNTIKVIP 316
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 317 PGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 353
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 132/472 (27%), Positives = 204/472 (43%), Gaps = 97/472 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 402 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 461
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K +G+C A+ +CP CRC VDC + LNK+P
Sbjct: 462 RLANKRIGQIKSKKFRCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPE 521
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--------- 170
+P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 522 HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILL 581
Query: 171 ---------------LKSLTS------------------------LTLNNNNLTYLPDGV 191
L+SL + L+L +N +T + G
Sbjct: 582 TSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGA 641
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L TL + N F C+C+L+WL WL++ + +C P +K I D+ +
Sbjct: 642 FDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQD 701
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCADGIVDCRE 310
F C D + NSC P+ + CP C C D +V C
Sbjct: 702 FTCD-----------------DGNDDNSCSPLSR----------CPTECTCLDTVVRCSN 734
Query: 311 KGLNKVPILLPEATTEL-----TYMV---SIDRVDKVLLYSYISNNFKRWTNRSRR---- 358
KGL +P +P TEL +M+ + + L +N +N+S
Sbjct: 735 KGLKVLPKGIPRDVTELYLDGNQFMLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQ 794
Query: 359 -----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +PP+ F K LR + L NDI+ +P AF + L +
Sbjct: 795 LLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHL 846
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 132/277 (47%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 628 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 687
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 688 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPTECTCLDTVVRCSNKGLKVLPKGIP 745
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N L PK +NYK L IDLS N+IS ++ +F
Sbjct: 746 RDVTELYLDGNQFM-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 804
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 805 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 864
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 865 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 901
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQ LK L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRLDLSENQI 139
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF + K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRL 132
>gi|296196817|ref|XP_002745998.1| PREDICTED: slit homolog 2 protein isoform 3 [Callithrix jacchus]
Length = 1520
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 146/451 (32%), Positives = 219/451 (48%), Gaps = 77/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLFCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + EF CSG C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 241 HLRGHNVAEVQKREFVCSGHQSFMAPSCSV-LHCPAACTCSNNIVDCRGKGLTEIPTNLP 299
Query: 124 EATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I+EL P AF + L + L N+
Sbjct: 300 ETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 359
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+++ VDAFQ L +L L+L +N L + G F+ L
Sbjct: 360 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 419
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 420 RAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 479
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
G+ + RSK+ +G+C A+ +CP CRC VDC + LNK
Sbjct: 480 GTE-DYRSKL--------------------SGDCFADLACPEKCRCEGTTVDCSNQKLNK 518
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P +P+ T EL ++ + +L + + FK+ R N IT++ AF
Sbjct: 519 IPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGAFEG 572
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ I L N + + K F + L+ +
Sbjct: 573 ASGVNEILLTSNRLENVRHKMFKGLESLKTL 603
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 139/277 (50%), Gaps = 55/277 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 132 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 191
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++
Sbjct: 192 VASFNHMPKLRTFRLHSNNLFCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQ 251
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CSG CS H CP C C++ IVDC
Sbjct: 252 KREFVCSG-----HQSFMAPSCSV-LH-------------------CPAACTCSNNIVDC 286
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 287 RGKGLTEIPTNLPETITEI------------------------------RLEQNSIKVIP 316
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 317 PGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 353
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/454 (28%), Positives = 201/454 (44%), Gaps = 85/454 (18%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 402 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 461
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K +G+C A+ +CP CRC VDC + LNK+P
Sbjct: 462 RLANKRIGQIKSKKFRCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPD 521
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--------- 170
+P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 522 HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILL 581
Query: 171 ---------------LKSLTS------------------------LTLNNNNLTYLPDGV 191
L+SL + L+L +N +T + G
Sbjct: 582 TSNRLENVRHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQITTVAPGA 641
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L TL + N F C+C+L+WL WL++ + +C P +K I D+ +
Sbjct: 642 FDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQD 701
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C D + NS C+ CP C C D +V C K
Sbjct: 702 FTCD-----------------DGNDDNS---------CSPHSRCPTECTCLDTVVRCSNK 735
Query: 312 GLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKA 371
GL +P +P TEL +D L+ +S N+K T L N I+ L ++
Sbjct: 736 GLKVLPKGIPRDVTELY----LDGNQFTLIPKELS-NYKHLT--LIDLSNNRISTLSNQS 788
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F+N +L + L N + +PP+ F K LR +
Sbjct: 789 FSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 822
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 628 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 687
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 688 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPHSRCPTECTCLDTVVRCSNKGLKVLPKGIP 745
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 746 RDVTELYLDGNQFT-LIPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 804
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 805 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 864
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 865 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 901
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 58/117 (49%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQ K L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKISAIERGAFQXXKELERLRLNRNHLQLFPELLFLGTAKLYRLDLSENQI 139
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKISAIERGAFQXXKELERLRLNRNHLQLFPELLFLGTAKLYRL 132
>gi|5532495|gb|AAD44759.1|AF144628_1 SLIT2 [Mus musculus]
Length = 1521
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 146/451 (32%), Positives = 219/451 (48%), Gaps = 77/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + EF CSG C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 241 HLRGHNVAEVQKREFVCSGHQSFMAPSCSV-LHCPAACTCSNNIVDCRGKGLTEIPTNLP 299
Query: 124 EATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I+EL P AF + L + L N+
Sbjct: 300 ETITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNK 359
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+++ VDAFQ L +L L+L +N L + G F+ L
Sbjct: 360 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSAL 419
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 420 RAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 479
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
G+ + RSK+ +G+C A+ +CP CRC VDC + LNK
Sbjct: 480 GTE-DYRSKL--------------------SGDCFADLACPEKCRCEGTTVDCSNQRLNK 518
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P +P+ T EL ++ + +L + + FK+ R N IT++ AF
Sbjct: 519 IPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGAFEG 572
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ I L N + + K F + L+ +
Sbjct: 573 ASGVNEILLTSNRLENVQHKMFKGLESLKTL 603
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 139/277 (50%), Gaps = 55/277 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 132 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 191
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++
Sbjct: 192 VASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQ 251
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CSG CS H CP C C++ IVDC
Sbjct: 252 KREFVCSG-----HQSFMAPSCSV-LH-------------------CPAACTCSNNIVDC 286
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 287 RGKGLTEIPTNLPETITEI------------------------------RLEQNSIRVIP 316
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRR+ L N I+EL P AF + L +
Sbjct: 317 PGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSL 353
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/455 (29%), Positives = 204/455 (44%), Gaps = 87/455 (19%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 402 SLYDNKLQTVAKGTFSALRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 461
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K +G+C A+ +CP CRC VDC + LNK+P
Sbjct: 462 RLANKRIGQIKSKKFRCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQRLNKIPD 521
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--------- 170
+P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 522 HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILL 581
Query: 171 ---------------LKSLTS------------------------LTLNNNNLTYLPDGV 191
L+SL + L+L +N +T + G
Sbjct: 582 TSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLGSVRLLSLYDNQITTVAPGA 641
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L TL + N F C+CHL+WL WL+R + +C P +K I D+ +
Sbjct: 642 FDSLHSLSTLNLLANPFNCNCHLAWLGEWLRRKRIVTGNPRCQKPYFLKEIPIQDVAIQD 701
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCADGIVDCRE 310
F C D + NSC P+ + CP C C D +V C
Sbjct: 702 FTCD-----------------DGNDDNSCSPLSR----------CPSECTCLDTVVRCSN 734
Query: 311 KGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPK 370
KGL +P +P+ TEL +D L+ +S N+K T L N I+ L +
Sbjct: 735 KGLKVLPKGIPKDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNNRISTLSNQ 787
Query: 371 AFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+F+N +L + L N + +PP+ F K LR +
Sbjct: 788 SFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 822
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 134/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+CHL+WL WL+R + +C P
Sbjct: 628 SLYDNQITTVAPGAFDSLHSLSTLNLLANPFNCNCHLAWLGEWLRRKRIVTGNPRCQKPY 687
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 688 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPSECTCLDTVVRCSNKGLKVLPKGIP 745
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
+ TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 746 KDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 804
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 805 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 864
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 865 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 901
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQ LK L L LN NNL P+ +F +L L +SEN
Sbjct: 83 VLQLMENRISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQI 139
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF + K L R+RL +N++ P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENRISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRL 132
>gi|6579191|gb|AAD38940.2| SLIT-2 [Rattus norvegicus]
Length = 796
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 148/454 (32%), Positives = 220/454 (48%), Gaps = 79/454 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPS---CPHPCRCADGIVDCREKGLNKVPI 120
H++G N+ ++ + EF CS E A S CP C C++ IVDCR KGL ++P
Sbjct: 241 HLRGHNVAEVQKREFVCSDEEEGHQSFMAPSCSVLHCPIACTCSNNIVDCRGKGLTEIPT 300
Query: 121 LLPEATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLS 156
LPE TE+RLEQN I+EL P AF + L + L
Sbjct: 301 NLPETITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLY 360
Query: 157 KNQISK------------------------VAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
N+I++ + VDAFQ L +L L+L +N L + G F
Sbjct: 361 GNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTF 420
Query: 193 AELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
+ L ++T+ +++N FICDCHL WL +L P +C +P + + I I +F
Sbjct: 421 SALRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKF 480
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CSG+ + RSK+ +G+C A+ +CP CRC VDC +
Sbjct: 481 RCSGTE-DYRSKL--------------------SGDCFADLACPEKCRCEGTTVDCSNQK 519
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKA 371
LNK+P +P+ T EL ++ + +L + + FK+ R L N IT++ A
Sbjct: 520 LNKIPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINLSNNKITDIEEGA 573
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + I L N + + K F + L+ +
Sbjct: 574 FEGASGVNEILLTSNRLENVQHKMFKGLESLKTL 607
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 139/277 (50%), Gaps = 51/277 (18%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 132 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 191
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++
Sbjct: 192 VASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQ 251
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CS E CS H CP C C++ IVDC
Sbjct: 252 KREFVCSDEE-EGHQSFMAPSCSV-LH-------------------CPIACTCSNNIVDC 290
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 291 RGKGLTEIPTNLPETITEI------------------------------RLEQNSIRVIP 320
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRR+ L N I+EL P AF + L +
Sbjct: 321 PGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSL 357
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 169/377 (44%), Gaps = 80/377 (21%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 406 SLYDNKLQTVAKGTFSALRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 465
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K +G+C A+ +CP CRC VDC + LNK+P
Sbjct: 466 RLANKRIGQIKSKKFRCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPD 525
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--------- 170
+P+ T ELRL N+ T L F +LR+I+LS N+I+ + AF+G
Sbjct: 526 HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGAFEGASGVNEILL 585
Query: 171 ---------------LKSLTS------------------------LTLNNNNLTYLPDGV 191
L+SL + L+L +N +T + G
Sbjct: 586 TSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFTGLGSVRLLSLYDNQITTVAPGA 645
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L TL + N F C+CHL+WL WL+R + +C P +K I D+ +
Sbjct: 646 FGTLHSLSTLNLLANPFNCNCHLAWLGEWLRRKRIVTGNPRCQKPYFLKEIPIQDVAIQD 705
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCADGIVDCRE 310
F C D + NSC P+ + CP C C D +V C
Sbjct: 706 FTCD-----------------DGNDDNSCSPLSR----------CPSECTCLDTVVRCSN 738
Query: 311 KGLNKVPILLPEATTEL 327
KGL +P +P TEL
Sbjct: 739 KGLKVLPKGIPRDVTEL 755
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 68/137 (49%), Gaps = 2/137 (1%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+CHL+WL WL+R + +C P
Sbjct: 632 SLYDNQITTVAPGAFGTLHSLSTLNLLANPFNCNCHLAWLGEWLRRKRIVTGNPRCQKPY 691
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 692 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPSECTCLDTVVRCSNKGLKVLPKGIP 749
Query: 124 EATTELRLEQNDITELP 140
TEL L+ N T +P
Sbjct: 750 RDVTELYLDGNQFTLVP 766
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 58/117 (49%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPHACPAQCSCSGSTVDCHGLALRIVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AF LK L L LN NNL P+ +F +L L +SEN
Sbjct: 83 ILQLMENKISTIERGAFHDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQI 139
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPHACPAQCSCSGSTVDCHGLALRIVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF + K L R+RL +N++ P F +L R+
Sbjct: 75 FAGLRHLRILQLMENKISTIERGAFHDLKELERLRLNRNNLQLFPELLFLGTAKLYRL 132
>gi|119613199|gb|EAW92793.1| slit homolog 2 (Drosophila), isoform CRA_b [Homo sapiens]
gi|219518085|gb|AAI43979.1| SLIT2 protein [Homo sapiens]
Length = 1521
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 146/451 (32%), Positives = 219/451 (48%), Gaps = 77/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + EF CSG C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 241 HLRGHNVAEVQKREFVCSGHQSFMAPSCSV-LHCPAACTCSNNIVDCRGKGLTEIPTNLP 299
Query: 124 EATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I+EL P AF + L + L N+
Sbjct: 300 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 359
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+++ VDAFQ L +L L+L +N L + G F+ L
Sbjct: 360 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 419
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 420 RAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 479
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
G+ + RSK+ +G+C A+ +CP CRC VDC + LNK
Sbjct: 480 GTE-DYRSKL--------------------SGDCFADLACPEKCRCEGTTVDCSNQKLNK 518
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P +P+ T EL ++ + +L + + FK+ R N IT++ AF
Sbjct: 519 IPEHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGAFEG 572
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ I L N + + K F + L+ +
Sbjct: 573 ASGVNEILLTSNRLENVQHKMFKGLESLKTL 603
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 139/277 (50%), Gaps = 55/277 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 132 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 191
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++
Sbjct: 192 VASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQ 251
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CSG CS H CP C C++ IVDC
Sbjct: 252 KREFVCSG-----HQSFMAPSCSV-LH-------------------CPAACTCSNNIVDC 286
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 287 RGKGLTEIPTNLPETITEI------------------------------RLEQNTIKVIP 316
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 317 PGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 353
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 132/455 (29%), Positives = 203/455 (44%), Gaps = 87/455 (19%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 402 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 461
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K +G+C A+ +CP CRC VDC + LNK+P
Sbjct: 462 RLANKRIGQIKSKKFRCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPE 521
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--------- 170
+P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 522 HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILL 581
Query: 171 ---------------LKSLTS------------------------LTLNNNNLTYLPDGV 191
L+SL + L+L +N +T + G
Sbjct: 582 TSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGA 641
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L TL + N F C+C+L+WL WL++ + +C P +K I D+ +
Sbjct: 642 FDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQD 701
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCADGIVDCRE 310
F C D + NSC P+ + CP C C D +V C
Sbjct: 702 FTCD-----------------DGNDDNSCSPLSR----------CPTECTCLDTVVRCSN 734
Query: 311 KGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPK 370
KGL +P +P TEL +D L+ +S N+K T L N I+ L +
Sbjct: 735 KGLKVLPKGIPRDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNNRISTLSNQ 787
Query: 371 AFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+F+N +L + L N + +PP+ F K LR +
Sbjct: 788 SFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 822
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 628 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 687
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 688 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPTECTCLDTVVRCSNKGLKVLPKGIP 745
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 746 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 804
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 805 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 864
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 865 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 901
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQ LK L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRLDLSENQI 139
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF + K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRL 132
>gi|410353073|gb|JAA43140.1| slit homolog 2 [Pan troglodytes]
Length = 1521
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 146/451 (32%), Positives = 219/451 (48%), Gaps = 77/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + EF CSG C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 241 HLRGHNVAEVQKREFVCSGHQSFMAPSCSV-LHCPAACTCSNNIVDCRGKGLTEIPTNLP 299
Query: 124 EATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I+EL P AF + L + L N+
Sbjct: 300 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 359
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+++ VDAFQ L +L L+L +N L + G F+ L
Sbjct: 360 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 419
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 420 RAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 479
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
G+ + RSK+ +G+C A+ +CP CRC VDC + LNK
Sbjct: 480 GTE-DYRSKL--------------------SGDCFADLACPEKCRCEGTTVDCSNQKLNK 518
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P +P+ T EL ++ + +L + + FK+ R N IT++ AF
Sbjct: 519 IPEHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGAFEG 572
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ I L N + + K F + L+ +
Sbjct: 573 ASGVNEILLTSNRLENVQHKMFKGLESLKTL 603
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 139/277 (50%), Gaps = 55/277 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 132 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 191
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++
Sbjct: 192 VASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQ 251
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CSG CS H CP C C++ IVDC
Sbjct: 252 KREFVCSG-----HQSFMAPSCSV-LH-------------------CPAACTCSNNIVDC 286
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 287 RGKGLTEIPTNLPETITEI------------------------------RLEQNTIKVIP 316
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 317 PGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 353
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 132/455 (29%), Positives = 203/455 (44%), Gaps = 87/455 (19%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 402 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 461
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K +G+C A+ +CP CRC VDC + LNK+P
Sbjct: 462 RLANKRIGQIKSKKFRCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPE 521
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--------- 170
+P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 522 HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILL 581
Query: 171 ---------------LKSLTS------------------------LTLNNNNLTYLPDGV 191
L+SL + L+L +N +T + G
Sbjct: 582 TSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGA 641
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L TL + N F C+C+L+WL WL++ + +C P +K I D+ +
Sbjct: 642 FDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQD 701
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCADGIVDCRE 310
F C D + NSC P+ + CP C C D +V C
Sbjct: 702 FTCD-----------------DGNDDNSCSPLSR----------CPTECTCLDTVVRCSN 734
Query: 311 KGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPK 370
KGL +P +P TEL +D L+ +S N+K T L N I+ L +
Sbjct: 735 KGLKVLPKGIPRDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNNRISTLSNQ 787
Query: 371 AFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+F+N +L + L N + +PP+ F K LR +
Sbjct: 788 SFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 822
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 628 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 687
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 688 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPTECTCLDTVVRCSNKGLKVLPKGIP 745
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 746 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 804
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 805 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 864
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 865 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 901
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQ LK L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRLDLSENQI 139
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF + K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRL 132
>gi|45477223|sp|Q9WVC1.3|SLIT2_RAT RecName: Full=Slit homolog 2 protein; Short=Slit-2; Flags:
Precursor
Length = 766
Score = 237 bits (605), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 148/454 (32%), Positives = 220/454 (48%), Gaps = 79/454 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPS---CPHPCRCADGIVDCREKGLNKVPI 120
H++G N+ ++ + EF CS E A S CP C C++ IVDCR KGL ++P
Sbjct: 241 HLRGHNVAEVQKREFVCSDEEEGHQSFMAPSCSVLHCPIACTCSNNIVDCRGKGLTEIPT 300
Query: 121 LLPEATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLS 156
LPE TE+RLEQN I+EL P AF + L + L
Sbjct: 301 NLPETITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLY 360
Query: 157 KNQISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
N+I+++ VDAFQ L +L L+L +N L + G F
Sbjct: 361 GNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTF 420
Query: 193 AELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
+ L ++T+ +++N FICDCHL WL +L P +C +P + + I I +F
Sbjct: 421 SALRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKF 480
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CSG+ + RSK+ +G+C A+ +CP CRC VDC +
Sbjct: 481 RCSGTE-DYRSKL--------------------SGDCFADLACPEKCRCEGTTVDCSNQK 519
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKA 371
LNK+P +P+ T EL ++ + +L + + FK+ R L N IT++ A
Sbjct: 520 LNKIPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINLSNNKITDIEEGA 573
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + I L N + + K F + L+ +
Sbjct: 574 FEGASGVNEILLTSNRLENVQHKMFKGLESLKTL 607
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 139/277 (50%), Gaps = 51/277 (18%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 132 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 191
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++
Sbjct: 192 VASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQ 251
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CS E CS H CP C C++ IVDC
Sbjct: 252 KREFVCSDEE-EGHQSFMAPSCSV-LH-------------------CPIACTCSNNIVDC 290
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 291 RGKGLTEIPTNLPETITEI------------------------------RLEQNSIRVIP 320
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRR+ L N I+EL P AF + L +
Sbjct: 321 PGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSL 357
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 169/377 (44%), Gaps = 80/377 (21%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 406 SLYDNKLQTVAKGTFSALRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 465
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K +G+C A+ +CP CRC VDC + LNK+P
Sbjct: 466 RLANKRIGQIKSKKFRCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPD 525
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--------- 170
+P+ T ELRL N+ T L F +LR+I+LS N+I+ + AF+G
Sbjct: 526 HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGAFEGASGVNEILL 585
Query: 171 ---------------LKSLTS------------------------LTLNNNNLTYLPDGV 191
L+SL + L+L +N +T + G
Sbjct: 586 TSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFTGLGSVRLLSLYDNQITTVAPGA 645
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L TL + N F C+CHL+WL WL+R + +C P +K I D+ +
Sbjct: 646 FGTLHSLSTLNLLANPFNCNCHLAWLGEWLRRKRIVTGNPRCQKPYFLKEIPIQDVAIQD 705
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCADGIVDCRE 310
F C D + NSC P+ + CP C C D +V C
Sbjct: 706 FTCD-----------------DGNDDNSCSPLSR----------CPSECTCLDTVVRCSN 738
Query: 311 KGLNKVPILLPEATTEL 327
KGL +P +P TEL
Sbjct: 739 KGLKVLPKGIPRDVTEL 755
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+CHL+WL WL+R + +C P
Sbjct: 632 SLYDNQITTVAPGAFGTLHSLSTLNLLANPFNCNCHLAWLGEWLRRKRIVTGNPRCQKPY 691
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + C+ CP C C D +V C KGL +P +P
Sbjct: 692 FLKEIPIQDVAIQDFTCDDGNDD--NSCSPLSRCPSECTCLDTVVRCSNKGLKVLPKGIP 749
Query: 124 EATTELRLEQNDITELP 140
TEL L+ N T +P
Sbjct: 750 RDVTELYLDGNQFTLVP 766
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 58/117 (49%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPHACPAQCSCSGSTVDCHGLALRIVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AF LK L L LN NNL P+ +F +L L +SEN
Sbjct: 83 ILQLMENKISTIERGAFHDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQI 139
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPHACPAQCSCSGSTVDCHGLALRIVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF + K L R+RL +N++ P F +L R+
Sbjct: 75 FAGLRHLRILQLMENKISTIERGAFHDLKELERLRLNRNNLQLFPELLFLGTAKLYRL 132
>gi|148705684|gb|EDL37631.1| slit homolog 2 (Drosophila), isoform CRA_a [Mus musculus]
Length = 1589
Score = 237 bits (605), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 146/451 (32%), Positives = 219/451 (48%), Gaps = 77/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 249 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 308
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + EF CSG C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 309 HLRGHNVAEVQKREFVCSGHQSFMAPSCSVL-HCPAACTCSNNIVDCRGKGLTEIPTNLP 367
Query: 124 EATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I+EL P AF + L + L N+
Sbjct: 368 ETITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNK 427
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+++ VDAFQ L +L L+L +N L + G F+ L
Sbjct: 428 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSAL 487
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 488 RAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 547
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
G+ + RSK+ +G+C A+ +CP CRC VDC + LNK
Sbjct: 548 GTE-DYRSKL--------------------SGDCFADLACPEKCRCEGTTVDCSNQRLNK 586
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P +P+ T EL ++ + +L + + FK+ R N IT++ AF
Sbjct: 587 IPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGAFEG 640
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ I L N + + K F + L+ +
Sbjct: 641 ASGVNEILLTSNRLENVQHKMFKGLESLKTL 671
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 139/277 (50%), Gaps = 55/277 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 200 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 259
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++
Sbjct: 260 VASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQ 319
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CSG CS H CP C C++ IVDC
Sbjct: 320 KREFVCSG-----HQSFMAPSCSV-LH-------------------CPAACTCSNNIVDC 354
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 355 RGKGLTEIPTNLPETITEI------------------------------RLEQNSIRVIP 384
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRR+ L N I+EL P AF + L +
Sbjct: 385 PGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSL 421
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/455 (29%), Positives = 204/455 (44%), Gaps = 87/455 (19%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 470 SLYDNKLQTVAKGTFSALRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 529
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K +G+C A+ +CP CRC VDC + LNK+P
Sbjct: 530 RLANKRIGQIKSKKFRCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQRLNKIPD 589
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--------- 170
+P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 590 HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILL 649
Query: 171 ---------------LKSLTS------------------------LTLNNNNLTYLPDGV 191
L+SL + L+L +N +T + G
Sbjct: 650 TSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLGSVRLLSLYDNQITTVAPGA 709
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L TL + N F C+CHL+WL WL+R + +C P +K I D+ +
Sbjct: 710 FDSLHSLSTLNLLANPFNCNCHLAWLGEWLRRKRIVTGNPRCQKPYFLKEIPIQDVAIQD 769
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCADGIVDCRE 310
F C D + NSC P+ + CP C C D +V C
Sbjct: 770 FTCD-----------------DGNDDNSCSPLSR----------CPSECTCLDTVVRCSN 802
Query: 311 KGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPK 370
KGL +P +P+ TEL +D L+ +S N+K T L N I+ L +
Sbjct: 803 KGLKVLPKGIPKDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNNRISTLSNQ 855
Query: 371 AFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+F+N +L + L N + +PP+ F K LR +
Sbjct: 856 SFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 890
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 134/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+CHL+WL WL+R + +C P
Sbjct: 696 SLYDNQITTVAPGAFDSLHSLSTLNLLANPFNCNCHLAWLGEWLRRKRIVTGNPRCQKPY 755
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 756 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPSECTCLDTVVRCSNKGLKVLPKGIP 813
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
+ TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 814 KDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 872
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 873 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 932
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 933 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 969
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 91 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKIDFAGLRHLR 150
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQ LK L L LN NNL P+ +F +L L +SEN
Sbjct: 151 VLQLMENRISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQI 207
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K+ +
Sbjct: 91 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKI--------D 142
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF + K L R+RL +N++ P F +L R+
Sbjct: 143 FAGLRHLRVLQLMENRISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRL 200
>gi|268370203|ref|NP_072154.2| slit homolog 2 protein precursor [Rattus norvegicus]
Length = 1525
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 148/454 (32%), Positives = 220/454 (48%), Gaps = 79/454 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPS---CPHPCRCADGIVDCREKGLNKVPI 120
H++G N+ ++ + EF CS E A S CP C C++ IVDCR KGL ++P
Sbjct: 241 HLRGHNVAEVQKREFVCSDEEEGHQSFMAPSCSVLHCPIACTCSNNIVDCRGKGLTEIPT 300
Query: 121 LLPEATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLS 156
LPE TE+RLEQN I+EL P AF + L + L
Sbjct: 301 NLPETITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLY 360
Query: 157 KNQISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
N+I+++ VDAFQ L +L L+L +N L + G F
Sbjct: 361 GNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTF 420
Query: 193 AELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
+ L ++T+ +++N FICDCHL WL +L P +C +P + + I I +F
Sbjct: 421 SALRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKF 480
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CSG+ + RSK+ +G+C A+ +CP CRC VDC +
Sbjct: 481 RCSGTE-DYRSKL--------------------SGDCFADLACPEKCRCEGTTVDCSNQK 519
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKA 371
LNK+P +P+ T EL ++ + +L + + FK+ R L N IT++ A
Sbjct: 520 LNKIPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINLSNNKITDIEEGA 573
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + I L N + + K F + L+ +
Sbjct: 574 FEGASGVNEILLTSNRLENVQHKMFKGLESLKTL 607
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 135/473 (28%), Positives = 204/473 (43%), Gaps = 99/473 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 406 SLYDNKLQTVAKGTFSALRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 465
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K +G+C A+ +CP CRC VDC + LNK+P
Sbjct: 466 RLANKRIGQIKSKKFRCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPD 525
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--------- 170
+P+ T ELRL N+ T L F +LR+I+LS N+I+ + AF+G
Sbjct: 526 HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGAFEGASGVNEILL 585
Query: 171 ---------------LKSLTS------------------------LTLNNNNLTYLPDGV 191
L+SL + L+L +N +T + G
Sbjct: 586 TSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFTGLGSVRLLSLYDNQITTVAPGA 645
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L TL + N F C+CHL+WL WL+R + +C P +K I D+ +
Sbjct: 646 FGTLHSLSTLNLLANPFNCNCHLAWLGEWLRRKRIVTGNPRCQKPYFLKEIPIQDVAIQD 705
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCADGIVDCRE 310
F C D + NSC P+ + CP C C D +V C
Sbjct: 706 FTCD-----------------DGNDDNSCSPLSR----------CPSECTCLDTVVRCSN 738
Query: 311 KGLNKVPILLPEATTELTYMVS---------IDRVDKVLLYSYISNNFKRWTNRSRR--- 358
KGL +P +P TEL Y+ + + L +N +N+S
Sbjct: 739 KGLKVLPKGIPRDVTEL-YLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMT 797
Query: 359 ------LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +PP+ F K LR + L NDI+ +P AF + L +
Sbjct: 798 QLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFGDLSALSHL 850
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 139/277 (50%), Gaps = 51/277 (18%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 132 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 191
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++
Sbjct: 192 VASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQ 251
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CS E CS H CP C C++ IVDC
Sbjct: 252 KREFVCSDEE-EGHQSFMAPSCSV-LH-------------------CPIACTCSNNIVDC 290
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 291 RGKGLTEIPTNLPETITEI------------------------------RLEQNSIRVIP 320
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRR+ L N I+EL P AF + L +
Sbjct: 321 PGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSL 357
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+CHL+WL WL+R + +C P
Sbjct: 632 SLYDNQITTVAPGAFGTLHSLSTLNLLANPFNCNCHLAWLGEWLRRKRIVTGNPRCQKPY 691
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 692 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPSECTCLDTVVRCSNKGLKVLPKGIP 749
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 750 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 808
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 809 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFGDLSALSHLAIGANPLYCDCNMQWLSD 868
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 869 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 905
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQ LK L L LN NNL P+ +F +L L +SEN
Sbjct: 83 VLQLMENKISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQI 139
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF + K L R+RL +N++ P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRL 132
>gi|426231495|ref|XP_004009774.1| PREDICTED: slit homolog 2 protein isoform 3 [Ovis aries]
Length = 1522
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 145/451 (32%), Positives = 218/451 (48%), Gaps = 77/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + EF CSG C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 241 HLRGHNVAEVQKREFVCSGHQSFMAPSCSV-LHCPAACTCSNNIVDCRGKGLTEIPTNLP 299
Query: 124 EATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I+EL P AF + L + L N+
Sbjct: 300 ETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 359
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+++ VDAFQ L +L L+L +N L + G F+ L
Sbjct: 360 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 419
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 420 RAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 479
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
G+ + RSK+ +G+C A+ +CP CRC VDC + L K
Sbjct: 480 GTE-DYRSKL--------------------SGDCFADLACPEKCRCEGTTVDCSNQKLTK 518
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P +P+ T EL ++ + +L + + FK+ R N IT++ AF
Sbjct: 519 IPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGAFEG 572
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ I L N + + K F + L+ +
Sbjct: 573 ASGVNEILLTSNRLENVQHKMFKGLESLKTL 603
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 146/294 (49%), Gaps = 58/294 (19%)
Query: 115 LNKVPILLPEATTEL---RLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L P LL T++L L +N I +P KAF ++ + L NQIS + AF+ L
Sbjct: 115 LQLFPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRAL 174
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT
Sbjct: 175 RDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYT 234
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C PSH++G N+ ++ + EF CSG CS H
Sbjct: 235 QCMGPSHLRGHNVAEVQKREFVCSG-----HQSFMAPSCSV-LH---------------- 272
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
CP C C++ IVDCR KGL ++P LPE TE+
Sbjct: 273 ---CPAACTCSNNIVDCRGKGLTEIPTNLPETITEI------------------------ 305
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +PP AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 306 ------RLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 353
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 131/454 (28%), Positives = 200/454 (44%), Gaps = 85/454 (18%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 402 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 461
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K +G+C A+ +CP CRC VDC + L K+P
Sbjct: 462 RLANKRIGQIKSKKFRCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLTKIPD 521
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--------- 170
+P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 522 HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILL 581
Query: 171 ---------------LKSLTS------------------------LTLNNNNLTYLPDGV 191
L+SL + L+L +N +T + G
Sbjct: 582 TSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQITTIAPGA 641
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L TL + N F C+C+L+WL WL++ + +C P +K I D+ +
Sbjct: 642 FDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQD 701
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C D + NSC P C AE C C D +V C K
Sbjct: 702 FTCD-----------------DGNDDNSC---SPLSRCPAE------CTCLDTVVRCSNK 735
Query: 312 GLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKA 371
L +P +P TEL +D L+ +S N+K T L N I+ L ++
Sbjct: 736 ALKVLPKGIPRDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNNRISTLSNQS 788
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F+N +L + L N + +PP+ F K LR +
Sbjct: 789 FSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 822
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 132/277 (47%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 628 SLYDNQITTIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 687
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C K L +P +P
Sbjct: 688 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPAECTCLDTVVRCSNKALKVLPKGIP 745
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 746 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 804
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 805 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLAALSHLAIGANPLYCDCNMQWLSD 864
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 865 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 901
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+I+ + AFQ LK L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRLDLSENQI 139
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N IT + AF + K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRL 132
>gi|296486654|tpg|DAA28767.1| TPA: slit homolog 2 isoform 2 [Bos taurus]
Length = 1522
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 145/451 (32%), Positives = 218/451 (48%), Gaps = 77/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + EF CSG C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 241 HLRGHNVAEVQKREFVCSGHQSFMAPSCSV-LHCPAACTCSNNIVDCRGKGLTEIPTNLP 299
Query: 124 EATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I+EL P AF + L + L N+
Sbjct: 300 ETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 359
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+++ VDAFQ L +L L+L +N L + G F+ L
Sbjct: 360 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 419
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 420 RAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 479
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
G+ + RSK+ +G+C A+ +CP CRC VDC + L K
Sbjct: 480 GTE-DYRSKL--------------------SGDCFADLACPEKCRCEGTTVDCSNQKLTK 518
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P +P+ T EL ++ + +L + + FK+ R N IT++ AF
Sbjct: 519 IPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGAFEG 572
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ I L N + + K F + L+ +
Sbjct: 573 ASGVNEILLTSNRLENVQHKMFKGLESLKTL 603
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 145/294 (49%), Gaps = 58/294 (19%)
Query: 115 LNKVPILLPEATTEL---RLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L P LL T++L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 115 LQLFPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNHISCIEDGAFRAL 174
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT
Sbjct: 175 RDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYT 234
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C PSH++G N+ ++ + EF CSG CS H
Sbjct: 235 QCMGPSHLRGHNVAEVQKREFVCSG-----HQSFMAPSCSV-LH---------------- 272
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
CP C C++ IVDCR KGL ++P LPE TE+
Sbjct: 273 ---CPAACTCSNNIVDCRGKGLTEIPTNLPETITEI------------------------ 305
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +PP AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 306 ------RLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 353
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 131/454 (28%), Positives = 200/454 (44%), Gaps = 85/454 (18%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 402 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 461
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K +G+C A+ +CP CRC VDC + L K+P
Sbjct: 462 RLANKRIGQIKSKKFRCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLTKIPD 521
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--------- 170
+P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 522 HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILL 581
Query: 171 ---------------LKSLTS------------------------LTLNNNNLTYLPDGV 191
L+SL + L+L +N +T + G
Sbjct: 582 TSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQITTIAPGA 641
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L TL + N F C+C+L+WL WL++ + +C P +K I D+ +
Sbjct: 642 FDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQD 701
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C D + NSC P C AE C C D +V C K
Sbjct: 702 FTCD-----------------DGNDDNSC---SPLSRCPAE------CTCLDTVVRCSNK 735
Query: 312 GLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKA 371
L +P +P TEL +D L+ +S N+K T L N I+ L ++
Sbjct: 736 ALKVLPKGIPRDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNNRISTLSNQS 788
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F+N +L + L N + +PP+ F K LR +
Sbjct: 789 FSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 822
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 132/277 (47%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 628 SLYDNQITTIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 687
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C K L +P +P
Sbjct: 688 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPAECTCLDTVVRCSNKALKVLPKGIP 745
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 746 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 804
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 805 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLAALSHLAIGANPLYCDCNMQWLSD 864
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 865 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 901
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+I+ + AFQ LK L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRLDLSENQI 139
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N IT + AF + K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRL 132
>gi|4151205|gb|AAD04309.1| neurogenic extracellular slit protein Slit2 [Homo sapiens]
Length = 1521
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 145/447 (32%), Positives = 217/447 (48%), Gaps = 77/447 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + EF CSG C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 241 HLRGHNVAEVQKREFVCSGHQSFMAPSCSV-LHCPAACTCSNNIVDCRGKGLTEIPTNLP 299
Query: 124 EATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I+EL P AF + L + L N+
Sbjct: 300 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 359
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+++ VDAFQ L +L L+L +N L + G F+ L
Sbjct: 360 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 419
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 420 RAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 479
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
G+ + RSK+ +G+C A+ +CP CRC VDC + LNK
Sbjct: 480 GTE-DYRSKL--------------------SGDCFADLACPEKCRCEGTTVDCSNQKLNK 518
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P +P+ T EL ++ + +L + + FK+ R N IT++ AF
Sbjct: 519 IPEHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGAFEG 572
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKR 401
+ I L N + + K F ++
Sbjct: 573 ASGVNEILLTSNRLENVQHKMFKGLEK 599
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 139/277 (50%), Gaps = 55/277 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 132 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 191
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++
Sbjct: 192 VASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQ 251
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CSG CS H CP C C++ IVDC
Sbjct: 252 KREFVCSG-----HQSFMAPSCSV-LH-------------------CPAACTCSNNIVDC 286
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 287 RGKGLTEIPTNLPETITEI------------------------------RLEQNTIKVIP 316
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 317 PGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 353
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 131/455 (28%), Positives = 201/455 (44%), Gaps = 87/455 (19%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 402 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 461
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K +G+C A+ +CP CRC VDC + LNK+P
Sbjct: 462 RLANKRIGQIKSKKFRCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPE 521
Query: 121 LLPEATTELRLEQND-------------------------ITELPPKAFANYKRLRRIDL 155
+P+ T ELRL N+ IT++ AF + I L
Sbjct: 522 HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILL 581
Query: 156 S------------------------KNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGV 191
+ N+I+ V D+F GL S+ L+L +N +T + G
Sbjct: 582 TSNRLENVQHKMFKGLEKPQNLMLRSNRITCVGNDSFIGLSSVRMLSLYDNQITTVAPGA 641
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L TL + N F C+C+L+WL WL++ + +C P +K I D+ +
Sbjct: 642 FDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQD 701
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCADGIVDCRE 310
F C D + NSC P+ + CP C C D +V C
Sbjct: 702 FTCD-----------------DGNDDNSCSPLSR----------CPTECTCLDTVVRCSN 734
Query: 311 KGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPK 370
KGL +P +P TEL +D L+ +S N+K T L N I+ L +
Sbjct: 735 KGLKVLPKGIPRDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNNRISTLSNQ 787
Query: 371 AFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+F+N +L + L N + +PP+ F K LR +
Sbjct: 788 SFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 822
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 628 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 687
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 688 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPTECTCLDTVVRCSNKGLKVLPKGIP 745
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 746 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 804
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 805 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 864
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 865 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 901
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQ LK L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRLDLSENQI 139
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF + K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRL 132
>gi|338723724|ref|XP_003364782.1| PREDICTED: slit homolog 2 protein isoform 2 [Equus caballus]
Length = 1522
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 145/451 (32%), Positives = 218/451 (48%), Gaps = 77/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + EF CSG C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 241 HLRGHNVAEVQKREFVCSGHQSFMAPSCSV-LHCPAACTCSNNIVDCRGKGLTEIPTNLP 299
Query: 124 EATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I+EL P AF + L + L N+
Sbjct: 300 ETITEIRLEQNSIKIIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 359
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+++ VDAFQ L +L L+L +N L + G F+ L
Sbjct: 360 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 419
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 420 RAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 479
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
G+ + RSK+ +G+C A+ +CP CRC VDC + L K
Sbjct: 480 GTE-DYRSKL--------------------SGDCFADLACPEKCRCEGTTVDCSNQKLTK 518
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P +P+ T EL ++ + +L + + FK+ R N IT++ AF
Sbjct: 519 IPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGAFEG 572
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ I L N + + K F + L+ +
Sbjct: 573 ASGVNEILLTSNRLENVQHKMFKGLESLKTL 603
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 146/294 (49%), Gaps = 58/294 (19%)
Query: 115 LNKVPILLPEATTEL---RLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L P LL T++L L +N I +P KAF ++ + L NQIS + AF+ L
Sbjct: 115 LQLFPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRAL 174
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT
Sbjct: 175 RDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYT 234
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C PSH++G N+ ++ + EF CSG CS H
Sbjct: 235 QCMGPSHLRGHNVAEVQKREFVCSG-----HQSFMAPSCSV-LH---------------- 272
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
CP C C++ IVDCR KGL ++P LPE TE+
Sbjct: 273 ---CPAACTCSNNIVDCRGKGLTEIPTNLPETITEI------------------------ 305
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +PP AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 306 ------RLEQNSIKIIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 353
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 130/455 (28%), Positives = 202/455 (44%), Gaps = 87/455 (19%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 402 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 461
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K +G+C A+ +CP CRC VDC + L K+P
Sbjct: 462 RLANKRIGQIKSKKFRCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLTKIPD 521
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--------- 170
+P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 522 HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILL 581
Query: 171 ---------------LKSLTS------------------------LTLNNNNLTYLPDGV 191
L+SL + L+L +N +T + G
Sbjct: 582 TSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNESFIGLSSVRLLSLYDNQITTIAPGA 641
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L TL + N F C+C+L+WL WL++ + +C P +K I D+ +
Sbjct: 642 FDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQD 701
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCADGIVDCRE 310
F C D + NSC P+ + CP C C D +V C
Sbjct: 702 FTCD-----------------DGNDDNSCSPLSR----------CPTECTCLDTVVRCSN 734
Query: 311 KGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPK 370
K L +P +P+ TEL +D L+ +S N+K T L N I+ L +
Sbjct: 735 KALKVLPKGIPKDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNNRISTLSNQ 787
Query: 371 AFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+F+N +L + L N + +PP+ F K LR +
Sbjct: 788 SFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 822
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 628 SLYDNQITTIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 687
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C K L +P +P
Sbjct: 688 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPTECTCLDTVVRCSNKALKVLPKGIP 745
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
+ TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 746 KDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 804
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 805 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 864
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 865 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 901
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+I+ + AFQ LK L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRLDLSENQI 139
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N IT + AF + K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRL 132
>gi|291385587|ref|XP_002709418.1| PREDICTED: slit homolog 2-like [Oryctolagus cuniculus]
Length = 1525
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 146/455 (32%), Positives = 219/455 (48%), Gaps = 81/455 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + EF CSG C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 241 HLRGHNVAEVQKREFVCSGHQSFMAPSCSV-LHCPTACTCSNNIVDCRGKGLTEIPTNLP 299
Query: 124 EATTELRLEQN----------------------------DITELPPKAFANYKRLRRIDL 155
E TE+RLEQN I+EL P AF + L + L
Sbjct: 300 ETITEIRLEQNAIKVIPPGAFSPYKKFRRNVEGHDLSNNQISELAPDAFQGLRSLNSLVL 359
Query: 156 SKNQISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGV 191
N+I+++ VDAFQ L +L L+L +N L + G
Sbjct: 360 YGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGT 419
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F+ L ++T+ +++N FICDCHL WL +L P +C +P + + I I +
Sbjct: 420 FSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKK 479
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F+CSG+ + RSK+ +G+C A+ +CP CRC VDC +
Sbjct: 480 FRCSGTE-DYRSKL--------------------SGDCFADLACPEKCRCEGTTVDCSNQ 518
Query: 312 GLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPK 370
LNK+P +P+ T EL ++ + +L + + FK+ R N IT++
Sbjct: 519 KLNKIPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEG 572
Query: 371 AFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
AF + I L N + + K F + L+ +
Sbjct: 573 AFEGASGVNEILLTSNRLENVQHKMFKGLESLKTL 607
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 134/455 (29%), Positives = 203/455 (44%), Gaps = 87/455 (19%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 406 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 465
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K +G+C A+ +CP CRC VDC + LNK+P
Sbjct: 466 RLANKRIGQIKSKKFRCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPD 525
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--------- 170
+P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 526 HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILL 585
Query: 171 ---------------LKSLTS------------------------LTLNNNNLTYLPDGV 191
L+SL + L+L +N +T + G
Sbjct: 586 TSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLGSVRLLSLYDNQITTIAPGA 645
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L TL + N F C+CHL+WL WL++ + +C P +K I D+ +
Sbjct: 646 FDTLHSLSTLNLLANPFNCNCHLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQD 705
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCADGIVDCRE 310
F C D + NSC P+ + CP C C D +V C
Sbjct: 706 FTCD-----------------DGNDDNSCSPLSR----------CPTECTCLDTVVRCSN 738
Query: 311 KGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPK 370
KGL +P +P TEL +D LL +S N+K T L N I+ L +
Sbjct: 739 KGLKVLPKGIPRDVTELY----LDGNQFTLLPKELS-NYKHLT--LIDLSNNRISTLSNQ 791
Query: 371 AFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+F+N +L + L N + +PP+ F K LR +
Sbjct: 792 SFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 826
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 102/281 (36%), Positives = 137/281 (48%), Gaps = 59/281 (20%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 132 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 191
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++
Sbjct: 192 VASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQ 251
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CSG CS H CP C C++ IVDC
Sbjct: 252 KREFVCSG-----HQSFMAPSCSV-LH-------------------CPTACTCSNNIVDC 286
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 287 RGKGLTEIPTNLPETITEI------------------------------RLEQNAIKVIP 316
Query: 369 PKAFANYKRLRR----IRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+ RR L N I+EL P AF + L +
Sbjct: 317 PGAFSPYKKFRRNVEGHDLSNNQISELAPDAFQGLRSLNSL 357
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+CHL+WL WL++ + +C P
Sbjct: 632 SLYDNQITTIAPGAFDTLHSLSTLNLLANPFNCNCHLAWLGEWLRKKRIVTGNPRCQKPY 691
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 692 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPTECTCLDTVVRCSNKGLKVLPKGIP 749
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 750 RDVTELYLDGNQFT-LLPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 808
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 809 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 868
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 869 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 905
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQ LK L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKISTIERGAFQDLKELERLRLNKNHLQLFPELLFLGTAKLYRLDLSENQI 139
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF + K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNKNHLQLFPELLFLGTAKLYRL 132
>gi|4585572|gb|AAD25539.1|AF133270_1 SLIT2 [Homo sapiens]
Length = 1525
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 147/454 (32%), Positives = 219/454 (48%), Gaps = 79/454 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRKRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPS---CPHPCRCADGIVDCREKGLNKVPI 120
H++G N+ ++ + EF CS E A S CP C C++ IVDCR KGL ++P
Sbjct: 241 HLRGHNVAEVQKREFVCSDEEEGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPT 300
Query: 121 LLPEATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLS 156
LPE TE+RLEQN I+EL P AF + L + L
Sbjct: 301 NLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLY 360
Query: 157 KNQISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
N+I+++ VDAFQ L +L L+L +N L + G F
Sbjct: 361 GNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTF 420
Query: 193 AELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
+ L ++T+ +++N FICDCHL WL +L P +C +P + + I I +F
Sbjct: 421 SPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKF 480
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CSG+ + RSK+ +G+C A+ +CP CRC VDC +
Sbjct: 481 RCSGTE-DYRSKL--------------------SGDCFADLACPEKCRCEGTTVDCSNQK 519
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKA 371
LNK+P +P+ T EL ++ + +L + + FK+ R N IT++ A
Sbjct: 520 LNKIPEHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGA 573
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + I L N + + K F + L+ +
Sbjct: 574 FEGASGVNEILLTSNRLENVQHKMFKGLESLKTL 607
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 139/277 (50%), Gaps = 51/277 (18%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 132 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 191
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++
Sbjct: 192 VASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRKRPRVGLYTQCMGPSHLRGHNVAEVQ 251
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CS E CS H CP C C++ IVDC
Sbjct: 252 KREFVCSDEE-EGHQSFMAPSCSV-LH-------------------CPAACTCSNNIVDC 290
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 291 RGKGLTEIPTNLPETITEI------------------------------RLEQNTIKVIP 320
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 321 PGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 357
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 132/455 (29%), Positives = 203/455 (44%), Gaps = 87/455 (19%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 406 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 465
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K +G+C A+ +CP CRC VDC + LNK+P
Sbjct: 466 RLANKRIGQIKSKKFRCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPE 525
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--------- 170
+P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 526 HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILL 585
Query: 171 ---------------LKSLTS------------------------LTLNNNNLTYLPDGV 191
L+SL + L+L +N +T + G
Sbjct: 586 TSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGA 645
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L TL + N F C+C+L+WL WL++ + +C P +K I D+ +
Sbjct: 646 FDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQD 705
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCADGIVDCRE 310
F C D + NSC P+ + CP C C D +V C
Sbjct: 706 FTCD-----------------DGNDDNSCSPLSR----------CPTECTCLDTVVRCSN 738
Query: 311 KGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPK 370
KGL +P +P TEL +D L+ +S N+K T L N I+ L +
Sbjct: 739 KGLKVLPKGIPRDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNNRISTLSNQ 791
Query: 371 AFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+F+N +L + L N + +PP+ F K LR +
Sbjct: 792 SFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 826
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 632 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 691
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 692 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPTECTCLDTVVRCSNKGLKVLPKGIP 749
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 750 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 808
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 809 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 868
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 869 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 905
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQ LK L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRLDLSENQI 139
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF + K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRL 132
>gi|403271195|ref|XP_003927522.1| PREDICTED: slit homolog 2 protein isoform 3 [Saimiri boliviensis
boliviensis]
Length = 1524
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 147/454 (32%), Positives = 219/454 (48%), Gaps = 79/454 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPS---CPHPCRCADGIVDCREKGLNKVPI 120
H++G N+ ++ + EF CS E A S CP C C++ IVDCR KGL ++P
Sbjct: 241 HLRGHNVAEVQKREFVCSDEEEGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPT 300
Query: 121 LLPEATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLS 156
LPE TE+RLEQN I+EL P AF + L + L
Sbjct: 301 NLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLY 360
Query: 157 KNQISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
N+I+++ VDAFQ L +L L+L +N L + G F
Sbjct: 361 GNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTF 420
Query: 193 AELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
+ L ++T+ +++N FICDCHL WL +L P +C +P + + I I +F
Sbjct: 421 SPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKF 480
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CSG+ + RSK+ +G+C A+ +CP CRC VDC +
Sbjct: 481 RCSGTE-DYRSKL--------------------SGDCFADLACPEKCRCEGTTVDCSNQK 519
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKA 371
LNK+P +P+ T EL ++ + +L + + FK+ R N IT++ A
Sbjct: 520 LNKIPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGA 573
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + I L N + + K F + L+ +
Sbjct: 574 FEGASGVNEILLTSNRLENVQHKMFKGLESLKTL 607
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 139/277 (50%), Gaps = 51/277 (18%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 132 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 191
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++
Sbjct: 192 VASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQ 251
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CS E CS H CP C C++ IVDC
Sbjct: 252 KREFVCSDEE-EGHQSFMAPSCSV-LH-------------------CPAACTCSNNIVDC 290
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 291 RGKGLTEIPTNLPETITEI------------------------------RLEQNSIKVIP 320
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 321 PGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 357
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/454 (28%), Positives = 201/454 (44%), Gaps = 85/454 (18%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 406 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 465
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K +G+C A+ +CP CRC VDC + LNK+P
Sbjct: 466 RLANKRIGQIKSKKFRCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPD 525
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--------- 170
+P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 526 HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILL 585
Query: 171 ---------------LKSLTS------------------------LTLNNNNLTYLPDGV 191
L+SL + L+L +N +T + G
Sbjct: 586 TSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQITTVAPGA 645
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L TL + N F C+C+L+WL WL++ + +C P +K I D+ +
Sbjct: 646 FDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQD 705
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C D + NS C+ CP C C D +V C K
Sbjct: 706 FTCD-----------------DGNDDNS---------CSPHSRCPTECTCLDTVVRCSNK 739
Query: 312 GLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKA 371
GL +P +P TEL +D L+ +S N+K T L N I+ L ++
Sbjct: 740 GLKVLPKGIPRDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNNRISTLSNQS 792
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F+N +L + L N + +PP+ F K LR +
Sbjct: 793 FSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 826
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 632 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 691
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 692 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPHSRCPTECTCLDTVVRCSNKGLKVLPKGIP 749
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 750 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 808
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 809 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 868
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 869 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 905
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQ LK L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRLDLSENQI 139
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF + K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRL 132
>gi|296196813|ref|XP_002745996.1| PREDICTED: slit homolog 2 protein isoform 1 [Callithrix jacchus]
Length = 1524
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 147/454 (32%), Positives = 219/454 (48%), Gaps = 79/454 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLFCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPS---CPHPCRCADGIVDCREKGLNKVPI 120
H++G N+ ++ + EF CS E A S CP C C++ IVDCR KGL ++P
Sbjct: 241 HLRGHNVAEVQKREFVCSDEEEGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPT 300
Query: 121 LLPEATTELRLEQNDI------------------------TELPPKAFANYKRLRRIDLS 156
LPE TE+RLEQN I +EL P AF + L + L
Sbjct: 301 NLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLY 360
Query: 157 KNQISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
N+I+++ VDAFQ L +L L+L +N L + G F
Sbjct: 361 GNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTF 420
Query: 193 AELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
+ L ++T+ +++N FICDCHL WL +L P +C +P + + I I +F
Sbjct: 421 SPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKF 480
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CSG+ + RSK+ +G+C A+ +CP CRC VDC +
Sbjct: 481 RCSGTE-DYRSKL--------------------SGDCFADLACPEKCRCEGTTVDCSNQK 519
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKA 371
LNK+P +P+ T EL ++ + +L + + FK+ R N IT++ A
Sbjct: 520 LNKIPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGA 573
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + I L N + + K F + L+ +
Sbjct: 574 FEGASGVNEILLTSNRLENVRHKMFKGLESLKTL 607
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 139/277 (50%), Gaps = 51/277 (18%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 132 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 191
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++
Sbjct: 192 VASFNHMPKLRTFRLHSNNLFCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQ 251
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CS E CS H CP C C++ IVDC
Sbjct: 252 KREFVCSDEE-EGHQSFMAPSCSV-LH-------------------CPAACTCSNNIVDC 290
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 291 RGKGLTEIPTNLPETITEI------------------------------RLEQNSIKVIP 320
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 321 PGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 357
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/454 (28%), Positives = 201/454 (44%), Gaps = 85/454 (18%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 406 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 465
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K +G+C A+ +CP CRC VDC + LNK+P
Sbjct: 466 RLANKRIGQIKSKKFRCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPD 525
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--------- 170
+P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 526 HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILL 585
Query: 171 ---------------LKSLTS------------------------LTLNNNNLTYLPDGV 191
L+SL + L+L +N +T + G
Sbjct: 586 TSNRLENVRHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQITTVAPGA 645
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L TL + N F C+C+L+WL WL++ + +C P +K I D+ +
Sbjct: 646 FDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQD 705
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C D + NS C+ CP C C D +V C K
Sbjct: 706 FTCD-----------------DGNDDNS---------CSPHSRCPTECTCLDTVVRCSNK 739
Query: 312 GLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKA 371
GL +P +P TEL +D L+ +S N+K T L N I+ L ++
Sbjct: 740 GLKVLPKGIPRDVTELY----LDGNQFTLIPKELS-NYKHLT--LIDLSNNRISTLSNQS 792
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F+N +L + L N + +PP+ F K LR +
Sbjct: 793 FSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 826
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 632 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 691
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 692 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPHSRCPTECTCLDTVVRCSNKGLKVLPKGIP 749
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 750 RDVTELYLDGNQFT-LIPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 808
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 809 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 868
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 869 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 905
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 58/117 (49%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQ K L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKISAIERGAFQXXKELERLRLNRNHLQLFPELLFLGTAKLYRLDLSENQI 139
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKISAIERGAFQXXKELERLRLNRNHLQLFPELLFLGTAKLYRL 132
>gi|410038138|ref|XP_001163334.3| PREDICTED: slit homolog 2 protein isoform 4 [Pan troglodytes]
Length = 1521
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 145/451 (32%), Positives = 218/451 (48%), Gaps = 77/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + EF CSG C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 241 HLRGHNVAEVQKREFVCSGHQSFMAPSCSV-LHCPAACTCSNNIVDCRGKGLTEIPTNLP 299
Query: 124 EATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I+EL P AF + L + L N+
Sbjct: 300 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 359
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+++ VDAFQ L +L L+L +N L + G F+ L
Sbjct: 360 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 419
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 420 RAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 479
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
G+ + RSK+ +G+C A+ +CP C C VDC + LNK
Sbjct: 480 GTE-DYRSKL--------------------SGDCFADLACPEKCHCEGTTVDCSNQKLNK 518
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P +P+ T EL ++ + +L + + FK+ R N IT++ AF
Sbjct: 519 IPEHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGAFEG 572
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ I L N + + K F + L+ +
Sbjct: 573 ASGVNEILLTSNRLENVQHKMFKGLESLKTL 603
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 139/277 (50%), Gaps = 55/277 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 132 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 191
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++
Sbjct: 192 VASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQ 251
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CSG CS H CP C C++ IVDC
Sbjct: 252 KREFVCSG-----HQSFMAPSCSV-LH-------------------CPAACTCSNNIVDC 286
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 287 RGKGLTEIPTNLPETITEI------------------------------RLEQNTIKVIP 316
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 317 PGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 353
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 131/455 (28%), Positives = 202/455 (44%), Gaps = 87/455 (19%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 402 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 461
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K +G+C A+ +CP C C VDC + LNK+P
Sbjct: 462 RLANKRIGQIKSKKFRCSGTEDYRSKLSGDCFADLACPEKCHCEGTTVDCSNQKLNKIPE 521
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--------- 170
+P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 522 HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILL 581
Query: 171 ---------------LKSLTS------------------------LTLNNNNLTYLPDGV 191
L+SL + L+L +N +T + G
Sbjct: 582 TSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGA 641
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L TL + N F C+C+L+WL WL++ + +C P +K I D+ +
Sbjct: 642 FDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQD 701
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCADGIVDCRE 310
F C D + NSC P+ + CP C C D +V C
Sbjct: 702 FTCD-----------------DGNDDNSCSPLSR----------CPTECTCLDTVVRCSN 734
Query: 311 KGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPK 370
KGL +P +P TEL +D L+ +S N+K T L N I+ L +
Sbjct: 735 KGLKVLPKGIPRDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNNRISTLSNQ 787
Query: 371 AFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+F+N +L + L N + +PP+ F K LR +
Sbjct: 788 SFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 822
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 628 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 687
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 688 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPTECTCLDTVVRCSNKGLKVLPKGIP 745
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 746 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 804
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 805 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 864
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 865 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 901
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQ LK L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRLDLSENQI 139
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF + K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRL 132
>gi|334331392|ref|XP_001368481.2| PREDICTED: slit homolog 2 protein [Monodelphis domestica]
Length = 1529
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 147/451 (32%), Positives = 216/451 (47%), Gaps = 69/451 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H+KG N+ ++ + EF CSG T C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 241 HLKGHNVAEVQKREFVCSGHQSFMTPSCSV-LHCPAACTCSNNIVDCRGKGLPEIPTNLP 299
Query: 124 EATTELRLEQNDI------------------------TELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I +E+ P AF + L + L N+
Sbjct: 300 ETITEIRLEQNSIKVIPPGAFSSYKKLRRIDLSNNQISEIAPDAFHGLRSLNSLVLYGNK 359
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+++ VDAFQ L +L L+L +N L + G F+ L
Sbjct: 360 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 419
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 420 RAIQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 479
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
F P K +G+C A+ +CP CRC VDC + LNK
Sbjct: 480 AKEQY-------------FIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNK 526
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P +P+ T EL ++ + +L + + FK+ R N IT++ AF
Sbjct: 527 IPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGAFEG 580
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ I L N + + K F + L+ +
Sbjct: 581 ASGVNEILLTSNRLENVRHKMFKGLESLKTL 611
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 147/294 (50%), Gaps = 58/294 (19%)
Query: 115 LNKVPILLPEATTEL---RLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L P LL T++L L +N I +P KAF ++ + L NQIS + AF+ L
Sbjct: 115 LQLFPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRAL 174
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT
Sbjct: 175 RDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYT 234
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C PSH+KG N+ ++ + EF CSG CS H
Sbjct: 235 QCMGPSHLKGHNVAEVQKREFVCSG-----HQSFMTPSCSV-LH---------------- 272
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
CP C C++ IVDCR KGL ++P LPE TE+
Sbjct: 273 ---CPAACTCSNNIVDCRGKGLPEIPTNLPETITEI------------------------ 305
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +PP AF++YK+LRRI L N I+E+ P AF + L +
Sbjct: 306 ------RLEQNSIKVIPPGAFSSYKKLRRIDLSNNQISEIAPDAFHGLRSLNSL 353
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 131/463 (28%), Positives = 202/463 (43%), Gaps = 95/463 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++TL +++N FICDCHL WL +L P +C +P
Sbjct: 402 SLYDNKLQTIAKGTFSPLRAIQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 461
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K +G+C A+ +CP CRC VDC
Sbjct: 462 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSN 521
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG- 170
+ LNK+P +P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 522 QKLNKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGA 581
Query: 171 -----------------------LKSLTS------------------------LTLNNNN 183
L+SL + L+L +N
Sbjct: 582 SGVNEILLTSNRLENVRHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQ 641
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N F C+C+L+WL WL++ + +C P +K
Sbjct: 642 ITTIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGDWLRKKRIVTGNPRCQKPYFLKEIP 701
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCA 302
I D+ +F C D + NSC P+ + CP C C
Sbjct: 702 IQDVAIQDFTCD-----------------DGNDDNSCSPLSR----------CPAECTCL 734
Query: 303 DGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQN 362
D +V C KGL +P +P+ TEL +D L+ +S N+K T L N
Sbjct: 735 DTVVRCSNKGLKALPKGIPKDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNN 787
Query: 363 DITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I+ L ++F+N +L + L N + +P + F K LR +
Sbjct: 788 RISTLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLL 830
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 134/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 636 SLYDNQITTIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGDWLRKKRIVTGNPRCQKPY 695
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 696 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPAECTCLDTVVRCSNKGLKALPKGIP 753
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
+ TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 754 KDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 812
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 813 LRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSSLSHLAIGANPLYCDCNMQWLSD 872
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 873 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 909
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A SCP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQSCPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQ LK L L LN NNL P+ +F +L L +SEN
Sbjct: 83 VLQLMENKISTIERGAFQDLKELERLRLNKNNLQLFPELLFLGTSKLYRLDLSENQI 139
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A SCP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQSCPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF + K L R+RL +N++ P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNKNNLQLFPELLFLGTSKLYRL 132
>gi|348558633|ref|XP_003465122.1| PREDICTED: LOW QUALITY PROTEIN: slit homolog 2 protein-like [Cavia
porcellus]
Length = 1507
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 147/454 (32%), Positives = 219/454 (48%), Gaps = 79/454 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPS---CPHPCRCADGIVDCREKGLNKVPI 120
H++G N+ ++ + EF CS E A S CP C C++ IVDCR KGL ++P
Sbjct: 241 HLRGHNVAEVQKREFVCSDEEEGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPT 300
Query: 121 LLPEATTELRLEQNDI------------------------TELPPKAFANYKRLRRIDLS 156
LPE TE+RLEQN I +EL P AF + L + L
Sbjct: 301 NLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLY 360
Query: 157 KNQISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
N+I+++ VDAFQ L +L L+L +N L + G F
Sbjct: 361 GNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTF 420
Query: 193 AELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
+ L ++T+ +++N FICDCHL WL +L P +C +P + + I I +F
Sbjct: 421 SPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKF 480
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CSG+ + RSK+ +G+C A+ +CP CRC VDC +
Sbjct: 481 RCSGTE-DYRSKL--------------------SGDCFADLACPEKCRCEGTTVDCSNQK 519
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKA 371
LNK+P +P+ T EL ++ + +L + + FK+ R N IT++ A
Sbjct: 520 LNKIPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGA 573
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + I L N + + K F + L+ +
Sbjct: 574 FEGASGVNEILLTSNRLENVQHKMFKGLESLKTL 607
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 146/294 (49%), Gaps = 54/294 (18%)
Query: 115 LNKVPILLPEATTEL---RLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L P LL T++L L +N I +P KAF ++ + L NQIS + AF+ L
Sbjct: 115 LQLFPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRAL 174
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT
Sbjct: 175 RDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYT 234
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C PSH++G N+ ++ + EF CS E CS H
Sbjct: 235 QCMGPSHLRGHNVAEVQKREFVCSDEE-EGHQSFMAPSCSV-LH---------------- 276
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
CP C C++ IVDCR KGL ++P LPE TE+
Sbjct: 277 ---CPAACTCSNNIVDCRGKGLTEIPTNLPETITEI------------------------ 309
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +PP AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 310 ------RLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 357
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 130/454 (28%), Positives = 200/454 (44%), Gaps = 85/454 (18%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 406 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 465
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K +G+C A+ +CP CRC VDC + LNK+P
Sbjct: 466 RLANKRIGQIKSKKFRCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPD 525
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--------- 170
+P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 526 HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILL 585
Query: 171 ---------------LKSLTS------------------------LTLNNNNLTYLPDGV 191
L+SL + L+L +N +T + G
Sbjct: 586 TSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQITTIAPGA 645
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L TL + N F C+C+L+WL WL++ + +C P +K D+ +
Sbjct: 646 FDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPXQDVAIQD 705
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C D + NS C+ CP C C D +V C K
Sbjct: 706 FTCD-----------------DGNDDNS---------CSPHSRCPAECTCLDTVVRCSNK 739
Query: 312 GLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKA 371
GL +P +P TEL +D L+ +S N+K T L N I+ L ++
Sbjct: 740 GLRVLPKGIPRDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNNRISTLSNQS 792
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F+N +L + L N + +PP+ F K LR +
Sbjct: 793 FSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 826
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 132/277 (47%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 632 SLYDNQITTIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 691
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 692 FLKEIPXQDVAIQDFTCDDGNDDNS--CSPHSRCPAECTCLDTVVRCSNKGLRVLPKGIP 749
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 750 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 808
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 809 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 868
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 869 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFLCQG 905
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VATQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+I+ + AFQ LK L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKITAIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRLDLSENQI 139
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VATQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N IT + AF + K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKITAIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRL 132
>gi|296196815|ref|XP_002745997.1| PREDICTED: slit homolog 2 protein isoform 2 [Callithrix jacchus]
Length = 1528
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 145/451 (32%), Positives = 215/451 (47%), Gaps = 69/451 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLFCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + EF CSG C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 241 HLRGHNVAEVQKREFVCSGHQSFMAPSCSV-LHCPAACTCSNNIVDCRGKGLTEIPTNLP 299
Query: 124 EATTELRLEQNDI------------------------TELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I +EL P AF + L + L N+
Sbjct: 300 ETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 359
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+++ VDAFQ L +L L+L +N L + G F+ L
Sbjct: 360 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 419
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 420 RAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 479
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
F P K +G+C A+ +CP CRC VDC + LNK
Sbjct: 480 AKEQY-------------FIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNK 526
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P +P+ T EL ++ + +L + + FK+ R N IT++ AF
Sbjct: 527 IPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGAFEG 580
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ I L N + + K F + L+ +
Sbjct: 581 ASGVNEILLTSNRLENVRHKMFKGLESLKTL 611
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 139/277 (50%), Gaps = 55/277 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 132 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 191
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++
Sbjct: 192 VASFNHMPKLRTFRLHSNNLFCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQ 251
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CSG CS H CP C C++ IVDC
Sbjct: 252 KREFVCSG-----HQSFMAPSCSV-LH-------------------CPAACTCSNNIVDC 286
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 287 RGKGLTEIPTNLPETITEI------------------------------RLEQNSIKVIP 316
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 317 PGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 353
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 200/462 (43%), Gaps = 93/462 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 402 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 461
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K +G+C A+ +CP CRC VDC
Sbjct: 462 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSN 521
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG- 170
+ LNK+P +P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 522 QKLNKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGA 581
Query: 171 -----------------------LKSLTS------------------------LTLNNNN 183
L+SL + L+L +N
Sbjct: 582 SGVNEILLTSNRLENVRHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQ 641
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N F C+C+L+WL WL++ + +C P +K
Sbjct: 642 ITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIP 701
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
I D+ +F C D + NS C+ CP C C D
Sbjct: 702 IQDVAIQDFTCD-----------------DGNDDNS---------CSPHSRCPTECTCLD 735
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQND 363
+V C KGL +P +P TEL +D L+ +S N+K T L N
Sbjct: 736 TVVRCSNKGLKVLPKGIPRDVTELY----LDGNQFTLIPKELS-NYKHLT--LIDLSNNR 788
Query: 364 ITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I+ L ++F+N +L + L N + +PP+ F K LR +
Sbjct: 789 ISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 830
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 636 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 695
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 696 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPHSRCPTECTCLDTVVRCSNKGLKVLPKGIP 753
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 754 RDVTELYLDGNQFT-LIPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 812
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 813 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 872
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 873 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 909
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 58/117 (49%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQ K L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKISAIERGAFQXXKELERLRLNRNHLQLFPELLFLGTAKLYRLDLSENQI 139
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKISAIERGAFQXXKELERLRLNRNHLQLFPELLFLGTAKLYRL 132
>gi|403271191|ref|XP_003927520.1| PREDICTED: slit homolog 2 protein isoform 1 [Saimiri boliviensis
boliviensis]
Length = 1528
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 145/451 (32%), Positives = 215/451 (47%), Gaps = 69/451 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + EF CSG C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 241 HLRGHNVAEVQKREFVCSGHQSFMAPSCSV-LHCPAACTCSNNIVDCRGKGLTEIPTNLP 299
Query: 124 EATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I+EL P AF + L + L N+
Sbjct: 300 ETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 359
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+++ VDAFQ L +L L+L +N L + G F+ L
Sbjct: 360 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 419
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 420 RAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 479
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
F P K +G+C A+ +CP CRC VDC + LNK
Sbjct: 480 AKEQY-------------FIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNK 526
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P +P+ T EL ++ + +L + + FK+ R N IT++ AF
Sbjct: 527 IPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGAFEG 580
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ I L N + + K F + L+ +
Sbjct: 581 ASGVNEILLTSNRLENVQHKMFKGLESLKTL 611
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 139/277 (50%), Gaps = 55/277 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 132 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 191
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++
Sbjct: 192 VASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQ 251
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CSG CS H CP C C++ IVDC
Sbjct: 252 KREFVCSG-----HQSFMAPSCSV-LH-------------------CPAACTCSNNIVDC 286
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 287 RGKGLTEIPTNLPETITEI------------------------------RLEQNSIKVIP 316
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 317 PGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 353
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 200/462 (43%), Gaps = 93/462 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 402 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 461
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K +G+C A+ +CP CRC VDC
Sbjct: 462 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSN 521
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG- 170
+ LNK+P +P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 522 QKLNKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGA 581
Query: 171 -----------------------LKSLTS------------------------LTLNNNN 183
L+SL + L+L +N
Sbjct: 582 SGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQ 641
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N F C+C+L+WL WL++ + +C P +K
Sbjct: 642 ITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIP 701
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
I D+ +F C D + NS C+ CP C C D
Sbjct: 702 IQDVAIQDFTCD-----------------DGNDDNS---------CSPHSRCPTECTCLD 735
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQND 363
+V C KGL +P +P TEL +D L+ +S N+K T L N
Sbjct: 736 TVVRCSNKGLKVLPKGIPRDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNNR 788
Query: 364 ITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I+ L ++F+N +L + L N + +PP+ F K LR +
Sbjct: 789 ISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 830
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 636 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 695
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 696 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPHSRCPTECTCLDTVVRCSNKGLKVLPKGIP 753
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 754 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 812
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 813 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 872
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 873 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 909
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQ LK L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRLDLSENQI 139
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF + K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRL 132
>gi|397513111|ref|XP_003826868.1| PREDICTED: slit homolog 2 protein isoform 2 [Pan paniscus]
Length = 1525
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 147/454 (32%), Positives = 219/454 (48%), Gaps = 79/454 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPS---CPHPCRCADGIVDCREKGLNKVPI 120
H++G N+ ++ + EF CS E A S CP C C++ IVDCR KGL ++P
Sbjct: 241 HLRGHNVAEVQKREFVCSDEEEGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPT 300
Query: 121 LLPEATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLS 156
LPE TE+RLEQN I+EL P AF + L + L
Sbjct: 301 NLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLY 360
Query: 157 KNQISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
N+I+++ VDAFQ L +L L+L +N L + G F
Sbjct: 361 GNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTF 420
Query: 193 AELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
+ L ++T+ +++N FICDCHL WL +L P +C +P + + I I +F
Sbjct: 421 SPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKF 480
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CSG+ + RSK+ +G+C A+ +CP CRC VDC +
Sbjct: 481 RCSGTE-DYRSKL--------------------SGDCFADLACPEKCRCEGTTVDCSNQK 519
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKA 371
LNK+P +P+ T EL ++ + +L + + FK+ R N IT++ A
Sbjct: 520 LNKIPEHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGA 573
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + I L N + + K F + L+ +
Sbjct: 574 FEGASGVNEILLTSNRLENVQHKMFKGLESLKTL 607
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 139/277 (50%), Gaps = 51/277 (18%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 132 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 191
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++
Sbjct: 192 VASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQ 251
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CS E CS H CP C C++ IVDC
Sbjct: 252 KREFVCSDEE-EGHQSFMAPSCSV-LH-------------------CPAACTCSNNIVDC 290
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 291 RGKGLTEIPTNLPETITEI------------------------------RLEQNTIKVIP 320
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 321 PGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 357
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 132/472 (27%), Positives = 204/472 (43%), Gaps = 97/472 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 406 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 465
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K +G+C A+ +CP CRC VDC + LNK+P
Sbjct: 466 RLANKRIGQIKSKKFRCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPE 525
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--------- 170
+P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 526 HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILL 585
Query: 171 ---------------LKSLTS------------------------LTLNNNNLTYLPDGV 191
L+SL + L+L +N +T + G
Sbjct: 586 TSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGA 645
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L TL + N F C+C+L+WL WL++ + +C P +K I D+ +
Sbjct: 646 FDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQD 705
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCADGIVDCRE 310
F C D + NSC P+ + CP C C D +V C
Sbjct: 706 FTCD-----------------DGNDDNSCSPLSR----------CPTECTCLDTVVRCSN 738
Query: 311 KGLNKVPILLPEATTEL-----TYMV---SIDRVDKVLLYSYISNNFKRWTNRSRR---- 358
KGL +P +P TEL +M+ + + L +N +N+S
Sbjct: 739 KGLKVLPKGIPRDVTELYLDGNQFMLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQ 798
Query: 359 -----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +PP+ F K LR + L NDI+ +P AF + L +
Sbjct: 799 LLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHL 850
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 132/277 (47%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 632 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 691
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 692 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPTECTCLDTVVRCSNKGLKVLPKGIP 749
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N L PK +NYK L IDLS N+IS ++ +F
Sbjct: 750 RDVTELYLDGNQFM-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 808
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 809 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 868
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 869 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 905
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQ LK L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRLDLSENQI 139
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF + K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRL 132
>gi|4759146|ref|NP_004778.1| slit homolog 2 protein precursor [Homo sapiens]
gi|33112440|sp|O94813.1|SLIT2_HUMAN RecName: Full=Slit homolog 2 protein; Short=Slit-2; Contains:
RecName: Full=Slit homolog 2 protein N-product;
Contains: RecName: Full=Slit homolog 2 protein
C-product; Flags: Precursor
gi|4049587|dbj|BAA35185.1| Slit-2 protein [Homo sapiens]
gi|109658818|gb|AAI17191.1| Slit homolog 2 (Drosophila) [Homo sapiens]
gi|119613198|gb|EAW92792.1| slit homolog 2 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 1529
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 145/451 (32%), Positives = 215/451 (47%), Gaps = 69/451 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + EF CSG C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 241 HLRGHNVAEVQKREFVCSGHQSFMAPSCSV-LHCPAACTCSNNIVDCRGKGLTEIPTNLP 299
Query: 124 EATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I+EL P AF + L + L N+
Sbjct: 300 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 359
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+++ VDAFQ L +L L+L +N L + G F+ L
Sbjct: 360 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 419
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 420 RAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 479
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
F P K +G+C A+ +CP CRC VDC + LNK
Sbjct: 480 AKEQY-------------FIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNK 526
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P +P+ T EL ++ + +L + + FK+ R N IT++ AF
Sbjct: 527 IPEHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGAFEG 580
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ I L N + + K F + L+ +
Sbjct: 581 ASGVNEILLTSNRLENVQHKMFKGLESLKTL 611
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 139/277 (50%), Gaps = 55/277 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 132 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 191
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++
Sbjct: 192 VASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQ 251
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CSG CS H CP C C++ IVDC
Sbjct: 252 KREFVCSG-----HQSFMAPSCSV-LH-------------------CPAACTCSNNIVDC 286
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 287 RGKGLTEIPTNLPETITEI------------------------------RLEQNTIKVIP 316
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 317 PGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 353
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 131/463 (28%), Positives = 202/463 (43%), Gaps = 95/463 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 402 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 461
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K +G+C A+ +CP CRC VDC
Sbjct: 462 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSN 521
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG- 170
+ LNK+P +P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 522 QKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGA 581
Query: 171 -----------------------LKSLTS------------------------LTLNNNN 183
L+SL + L+L +N
Sbjct: 582 SGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQ 641
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N F C+C+L+WL WL++ + +C P +K
Sbjct: 642 ITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIP 701
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCA 302
I D+ +F C D + NSC P+ + CP C C
Sbjct: 702 IQDVAIQDFTCD-----------------DGNDDNSCSPLSR----------CPTECTCL 734
Query: 303 DGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQN 362
D +V C KGL +P +P TEL +D L+ +S N+K T L N
Sbjct: 735 DTVVRCSNKGLKVLPKGIPRDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNN 787
Query: 363 DITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I+ L ++F+N +L + L N + +PP+ F K LR +
Sbjct: 788 RISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 830
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 636 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 695
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 696 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPTECTCLDTVVRCSNKGLKVLPKGIP 753
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 754 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 812
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 813 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 872
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 873 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 909
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQ LK L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRLDLSENQI 139
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF + K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRL 132
>gi|219520760|gb|AAI45489.1| Slit2 protein [Mus musculus]
Length = 1525
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 147/454 (32%), Positives = 219/454 (48%), Gaps = 79/454 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPS---CPHPCRCADGIVDCREKGLNKVPI 120
H++G N+ ++ + EF CS E A S CP C C++ IVDCR KGL ++P
Sbjct: 241 HLRGHNVAEVQKREFVCSDEEEGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPT 300
Query: 121 LLPEATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLS 156
LPE TE+RLEQN I+EL P AF + L + L
Sbjct: 301 NLPETITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLY 360
Query: 157 KNQISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
N+I+++ VDAFQ L +L L+L +N L + G F
Sbjct: 361 GNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTF 420
Query: 193 AELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
+ L ++T+ +++N FICDCHL WL +L P +C +P + + I I +F
Sbjct: 421 SALRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKF 480
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CSG+ + RSK+ +G+C A+ +CP CRC VDC +
Sbjct: 481 RCSGTE-DYRSKL--------------------SGDCFADLACPEKCRCEGTTVDCSNQR 519
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKA 371
LNK+P +P+ T EL ++ + +L + + FK+ R N IT++ A
Sbjct: 520 LNKIPEHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGA 573
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + I L N + + K F + L+ +
Sbjct: 574 FEGASGVNEILLTSNRLENVQHKMFKGLESLKTL 607
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 139/277 (50%), Gaps = 51/277 (18%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 132 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 191
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++
Sbjct: 192 VASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQ 251
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CS E CS H CP C C++ IVDC
Sbjct: 252 KREFVCSDEE-EGHQSFMAPSCSV-LH-------------------CPAACTCSNNIVDC 290
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 291 RGKGLTEIPTNLPETITEI------------------------------RLEQNSIRVIP 320
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRR+ L N I+EL P AF + L +
Sbjct: 321 PGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSL 357
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/455 (29%), Positives = 204/455 (44%), Gaps = 87/455 (19%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 406 SLYDNKLQTVAKGTFSALRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 465
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K +G+C A+ +CP CRC VDC + LNK+P
Sbjct: 466 RLANKRIGQIKSKKFRCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQRLNKIPE 525
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--------- 170
+P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 526 HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILL 585
Query: 171 ---------------LKSLTS------------------------LTLNNNNLTYLPDGV 191
L+SL + L+L +N +T + G
Sbjct: 586 TSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLGSVRLLSLYDNQITTVAPGA 645
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L TL + N F C+CHL+WL WL+R + +C P +K I D+ +
Sbjct: 646 FDSLHSLSTLNLLANPFNCNCHLAWLGEWLRRKRIVTGNPRCQKPYFLKEIPIQDVAIQD 705
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCADGIVDCRE 310
F C D + NSC P+ + CP C C D +V C
Sbjct: 706 FTCD-----------------DGNDDNSCSPLSR----------CPSECTCLDTVVRCSN 738
Query: 311 KGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPK 370
KGL +P +P+ TEL +D L+ +S N+K T L N I+ L +
Sbjct: 739 KGLKVLPKGIPKDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNNRISTLSNQ 791
Query: 371 AFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+F+N +L + L N + +PP+ F K LR +
Sbjct: 792 SFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 826
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 134/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+CHL+WL WL+R + +C P
Sbjct: 632 SLYDNQITTVAPGAFDSLHSLSTLNLLANPFNCNCHLAWLGEWLRRKRIVTGNPRCQKPY 691
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 692 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPSECTCLDTVVRCSNKGLKVLPKGIP 749
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
+ TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 750 KDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 808
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 809 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 868
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 869 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 905
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQ LK L L LN NNL P+ +F +L L +SEN
Sbjct: 83 VLQLMENRISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQI 139
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF + K L R+RL +N++ P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENRISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRL 132
>gi|60360540|dbj|BAD90514.1| mKIAA4141 protein [Mus musculus]
Length = 1593
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 147/454 (32%), Positives = 219/454 (48%), Gaps = 79/454 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 249 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 308
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPS---CPHPCRCADGIVDCREKGLNKVPI 120
H++G N+ ++ + EF CS E A S CP C C++ IVDCR KGL ++P
Sbjct: 309 HLRGHNVAEVQKREFVCSDEEEGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPT 368
Query: 121 LLPEATTELRLEQNDI------------------------TELPPKAFANYKRLRRIDLS 156
LPE TE+RLEQN I +EL P AF + L + L
Sbjct: 369 NLPETITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLY 428
Query: 157 KNQISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
N+I+++ VDAFQ L +L L+L +N L + G F
Sbjct: 429 GNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTF 488
Query: 193 AELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
+ L ++T+ +++N FICDCHL WL +L P +C +P + + I I +F
Sbjct: 489 SALRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKF 548
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CSG+ + RSK+ +G+C A+ +CP CRC VDC +
Sbjct: 549 RCSGTE-DYRSKL--------------------SGDCFADLACPEKCRCEGTTVDCSNQR 587
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKA 371
LNK+P +P+ T EL ++ + +L + + FK+ R N IT++ A
Sbjct: 588 LNKIPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGA 641
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + I L N + + K F + L+ +
Sbjct: 642 FEGASGVNEILLTSNRLENVQHKMFKGLESLKTL 675
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 139/277 (50%), Gaps = 51/277 (18%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 200 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 259
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++
Sbjct: 260 VASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQ 319
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CS E CS H CP C C++ IVDC
Sbjct: 320 KREFVCSDEE-EGHQSFMAPSCSV-LH-------------------CPAACTCSNNIVDC 358
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 359 RGKGLTEIPTNLPETITEI------------------------------RLEQNSIRVIP 388
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRR+ L N I+EL P AF + L +
Sbjct: 389 PGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSL 425
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/455 (29%), Positives = 204/455 (44%), Gaps = 87/455 (19%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 474 SLYDNKLQTVAKGTFSALRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 533
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K +G+C A+ +CP CRC VDC + LNK+P
Sbjct: 534 RLANKRIGQIKSKKFRCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQRLNKIPD 593
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--------- 170
+P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 594 HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILL 653
Query: 171 ---------------LKSLTS------------------------LTLNNNNLTYLPDGV 191
L+SL + L+L +N +T + G
Sbjct: 654 TSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLGSVRLLSLYDNQITTVAPGA 713
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L TL + N F C+CHL+WL WL+R + +C P +K I D+ +
Sbjct: 714 FDSLHSLSTLNLLANPFNCNCHLAWLGEWLRRKRIVTGNPRCQKPYFLKEIPIQDVAIQD 773
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCADGIVDCRE 310
F C D + NSC P+ + CP C C D +V C
Sbjct: 774 FTCD-----------------DGNDDNSCSPLSR----------CPSECTCLDTVVRCSN 806
Query: 311 KGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPK 370
KGL +P +P+ TEL +D L+ +S N+K T L N I+ L +
Sbjct: 807 KGLKVLPKGIPKDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNNRISTLSNQ 859
Query: 371 AFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+F+N +L + L N + +PP+ F K LR +
Sbjct: 860 SFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 894
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 134/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+CHL+WL WL+R + +C P
Sbjct: 700 SLYDNQITTVAPGAFDSLHSLSTLNLLANPFNCNCHLAWLGEWLRRKRIVTGNPRCQKPY 759
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 760 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPSECTCLDTVVRCSNKGLKVLPKGIP 817
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
+ TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 818 KDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 876
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 877 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 936
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 937 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 973
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 91 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKIDFAGLRHLR 150
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQ LK L L LN NNL P+ +F +L L +SEN
Sbjct: 151 VLQLMENRISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQI 207
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K+ +
Sbjct: 91 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKI--------D 142
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF + K L R+RL +N++ P F +L R+
Sbjct: 143 FAGLRHLRVLQLMENRISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRL 200
>gi|355687193|gb|EHH25777.1| Slit-like protein 2 protein [Macaca mulatta]
Length = 1529
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 145/451 (32%), Positives = 215/451 (47%), Gaps = 69/451 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + EF CSG C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 241 HLRGHNVAEVQKREFVCSGHQSFMAPSCSV-LHCPAACTCSNNIVDCRGKGLTEIPTNLP 299
Query: 124 EATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I+EL P AF + L + L N+
Sbjct: 300 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 359
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+++ VDAFQ L +L L+L +N L + G F+ L
Sbjct: 360 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 419
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 420 RAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 479
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
F P K +G+C A+ +CP CRC VDC + LNK
Sbjct: 480 AKEQY-------------FIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNK 526
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P +P+ T EL ++ + +L + + FK+ R N IT++ AF
Sbjct: 527 IPEHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGAFEG 580
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ I L N + + K F + L+ +
Sbjct: 581 ASGVNEILLTSNRLENVQHKMFKGLESLKTL 611
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 118/386 (30%), Positives = 159/386 (41%), Gaps = 127/386 (32%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL---------------------- 129
A +CP C C+ VDC L VP +P T L
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 130 --RLEQNDITELPPKAFANYKRLRRIDLSKN----------------------------- 158
+L +N I+ + AF + K L R+ L++N
Sbjct: 83 VLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRLDLREVIYTAM 142
Query: 159 -------------------QISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLR 199
QIS + AF+ L+ L LTLNNNN+T L F + +LR
Sbjct: 143 VRSDRKYFHNLFNRQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLR 202
Query: 200 TLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSM 259
T R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++ + EF CSG
Sbjct: 203 TFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQKREFVCSG--- 259
Query: 260 ETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPIL 319
CS H CP C C++ IVDCR KGL ++P
Sbjct: 260 --HQSFMAPSCSV-LH-------------------CPAACTCSNNIVDCRGKGLTEIPTN 297
Query: 320 LPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLR 379
LPE TE+ RLEQN I +PP AF+ YK+LR
Sbjct: 298 LPETITEI------------------------------RLEQNTIKVIPPGAFSPYKKLR 327
Query: 380 RIRLEQNDITELPPKAFANYKRLRRM 405
RI L N I+EL P AF + L +
Sbjct: 328 RIDLSNNQISELAPDAFQGLRSLNSL 353
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 131/481 (27%), Positives = 202/481 (41%), Gaps = 107/481 (22%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 402 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 461
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K +G+C A+ +CP CRC VDC
Sbjct: 462 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSN 521
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG- 170
+ LNK+P +P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 522 QKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGA 581
Query: 171 -----------------------LKSLTS------------------------LTLNNNN 183
L+SL + L+L +N
Sbjct: 582 SGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQ 641
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N F C+C+L+WL WL++ + +C P +K
Sbjct: 642 ITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIP 701
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCA 302
I D+ +F C D + NSC P+ + CP C C
Sbjct: 702 IQDVAIQDFTCD-----------------DGNDDNSCSPLSR----------CPTECTCL 734
Query: 303 DGIVDCREKGLNKVPILLPEATTELTYMVS---------IDRVDKVLLYSYISNNFKRWT 353
D +V C KGL +P +P TEL Y+ + + L +N +
Sbjct: 735 DTVVRCSNKGLKVLPKGIPRDVTEL-YLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLS 793
Query: 354 NRSRR---------LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRR 404
N+S L N + +PP+ F K LR + L NDI+ +P AF + L
Sbjct: 794 NQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISAVPEGAFNDLSALSH 853
Query: 405 M 405
+
Sbjct: 854 L 854
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 636 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 695
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 696 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPTECTCLDTVVRCSNKGLKVLPKGIP 753
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 754 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 812
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 813 LRCIPPRTFDGLKSLRLLSLHGNDISAVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 872
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 873 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 909
>gi|390460991|ref|XP_003732573.1| PREDICTED: slit homolog 2 protein [Callithrix jacchus]
Length = 1531
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 145/453 (32%), Positives = 217/453 (47%), Gaps = 70/453 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLFCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPT--GECAAEPSCPHPCRCADGIVDCREKGLNKVPIL 121
H++G N+ ++ + EF CSG E+ + + CP C C++ IVDCR KGL ++P
Sbjct: 241 HLRGHNVAEVQKREFVCSGKGERRSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPTN 300
Query: 122 LPEATTELRLEQNDI------------------------TELPPKAFANYKRLRRIDLSK 157
LPE TE+RLEQN I +EL P AF + L + L
Sbjct: 301 LPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 360
Query: 158 NQISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFA 193
N+I+++ VDAFQ L +L L+L +N L + G F+
Sbjct: 361 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFS 420
Query: 194 ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFK 253
L ++T+ +++N FICDCHL WL +L P +C +P + + I I +F+
Sbjct: 421 PLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFR 480
Query: 254 CSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL 313
CS F P K +G+C A+ +CP CRC VDC + L
Sbjct: 481 CSAKEQY-------------FIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKL 527
Query: 314 NKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAF 372
NK+P +P+ T EL ++ + +L + + FK+ R N IT++ AF
Sbjct: 528 NKIPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGAF 581
Query: 373 ANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ I L N + + K F + L+ +
Sbjct: 582 EGASGVNEILLTSNRLENVRHKMFKGLESLKTL 614
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 105/277 (37%), Positives = 140/277 (50%), Gaps = 52/277 (18%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 132 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 191
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++
Sbjct: 192 VASFNHMPKLRTFRLHSNNLFCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQ 251
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CSG R CS H CP C C++ IVDC
Sbjct: 252 KREFVCSGKG--ERRSFMAPSCSV-LH-------------------CPAACTCSNNIVDC 289
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 290 RGKGLTEIPTNLPETITEI------------------------------RLEQNSIKVIP 319
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 320 PGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 356
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 200/462 (43%), Gaps = 93/462 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 405 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 464
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K +G+C A+ +CP CRC VDC
Sbjct: 465 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSN 524
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG- 170
+ LNK+P +P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 525 QKLNKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGA 584
Query: 171 -----------------------LKSLTS------------------------LTLNNNN 183
L+SL + L+L +N
Sbjct: 585 SGVNEILLTSNRLENVRHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQ 644
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N F C+C+L+WL WL++ + +C P +K
Sbjct: 645 ITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIP 704
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
I D+ +F C D + NS C+ CP C C D
Sbjct: 705 IQDVAIQDFTCD-----------------DGNDDNS---------CSPHSRCPTECTCLD 738
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQND 363
+V C KGL +P +P TEL +D L+ +S N+K T L N
Sbjct: 739 TVVRCSNKGLKVLPKGIPRDVTELY----LDGNQFTLIPKELS-NYKHLT--LIDLSNNR 791
Query: 364 ITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I+ L ++F+N +L + L N + +PP+ F K LR +
Sbjct: 792 ISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 833
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 639 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 698
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 699 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPHSRCPTECTCLDTVVRCSNKGLKVLPKGIP 756
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 757 RDVTELYLDGNQFT-LIPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 815
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 816 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 875
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 876 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 912
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQG K L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKISAIERGAFQGSKELERLRLNRNHLQLFPELLFLGTAKLYRLDLSENQI 139
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKISAIERGAFQGSKELERLRLNRNHLQLFPELLFLGTAKLYRL 132
>gi|410217030|gb|JAA05734.1| slit homolog 2 [Pan troglodytes]
gi|410353075|gb|JAA43141.1| slit homolog 2 [Pan troglodytes]
Length = 1529
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 145/451 (32%), Positives = 215/451 (47%), Gaps = 69/451 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + EF CSG C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 241 HLRGHNVAEVQKREFVCSGHQSFMAPSCSV-LHCPAACTCSNNIVDCRGKGLTEIPTNLP 299
Query: 124 EATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I+EL P AF + L + L N+
Sbjct: 300 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 359
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+++ VDAFQ L +L L+L +N L + G F+ L
Sbjct: 360 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 419
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 420 RAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 479
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
F P K +G+C A+ +CP CRC VDC + LNK
Sbjct: 480 AKEQY-------------FIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNK 526
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P +P+ T EL ++ + +L + + FK+ R N IT++ AF
Sbjct: 527 IPEHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGAFEG 580
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ I L N + + K F + L+ +
Sbjct: 581 ASGVNEILLTSNRLENVQHKMFKGLESLKTL 611
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 139/277 (50%), Gaps = 55/277 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 132 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 191
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++
Sbjct: 192 VASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQ 251
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CSG CS H CP C C++ IVDC
Sbjct: 252 KREFVCSG-----HQSFMAPSCSV-LH-------------------CPAACTCSNNIVDC 286
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 287 RGKGLTEIPTNLPETITEI------------------------------RLEQNTIKVIP 316
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 317 PGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 353
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 131/463 (28%), Positives = 202/463 (43%), Gaps = 95/463 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 402 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 461
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K +G+C A+ +CP CRC VDC
Sbjct: 462 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSN 521
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG- 170
+ LNK+P +P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 522 QKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGA 581
Query: 171 -----------------------LKSLTS------------------------LTLNNNN 183
L+SL + L+L +N
Sbjct: 582 SGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQ 641
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N F C+C+L+WL WL++ + +C P +K
Sbjct: 642 ITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIP 701
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCA 302
I D+ +F C D + NSC P+ + CP C C
Sbjct: 702 IQDVAIQDFTCD-----------------DGNDDNSCSPLSR----------CPTECTCL 734
Query: 303 DGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQN 362
D +V C KGL +P +P TEL +D L+ +S N+K T L N
Sbjct: 735 DTVVRCSNKGLKVLPKGIPRDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNN 787
Query: 363 DITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I+ L ++F+N +L + L N + +PP+ F K LR +
Sbjct: 788 RISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 830
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 636 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 695
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 696 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPTECTCLDTVVRCSNKGLKVLPKGIP 753
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 754 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 812
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 813 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 872
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 873 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 909
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQ LK L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRLDLSENQI 139
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF + K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRL 132
>gi|397513109|ref|XP_003826867.1| PREDICTED: slit homolog 2 protein isoform 1 [Pan paniscus]
Length = 1529
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 145/451 (32%), Positives = 215/451 (47%), Gaps = 69/451 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + EF CSG C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 241 HLRGHNVAEVQKREFVCSGHQSFMAPSCSV-LHCPAACTCSNNIVDCRGKGLTEIPTNLP 299
Query: 124 EATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I+EL P AF + L + L N+
Sbjct: 300 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 359
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+++ VDAFQ L +L L+L +N L + G F+ L
Sbjct: 360 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 419
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 420 RAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 479
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
F P K +G+C A+ +CP CRC VDC + LNK
Sbjct: 480 AKEQY-------------FIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNK 526
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P +P+ T EL ++ + +L + + FK+ R N IT++ AF
Sbjct: 527 IPEHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGAFEG 580
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ I L N + + K F + L+ +
Sbjct: 581 ASGVNEILLTSNRLENVQHKMFKGLESLKTL 611
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 139/277 (50%), Gaps = 55/277 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 132 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 191
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++
Sbjct: 192 VASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQ 251
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CSG CS H CP C C++ IVDC
Sbjct: 252 KREFVCSG-----HQSFMAPSCSV-LH-------------------CPAACTCSNNIVDC 286
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 287 RGKGLTEIPTNLPETITEI------------------------------RLEQNTIKVIP 316
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 317 PGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 353
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 131/480 (27%), Positives = 203/480 (42%), Gaps = 105/480 (21%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 402 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 461
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K +G+C A+ +CP CRC VDC
Sbjct: 462 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSN 521
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG- 170
+ LNK+P +P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 522 QKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGA 581
Query: 171 -----------------------LKSLTS------------------------LTLNNNN 183
L+SL + L+L +N
Sbjct: 582 SGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQ 641
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N F C+C+L+WL WL++ + +C P +K
Sbjct: 642 ITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIP 701
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCA 302
I D+ +F C D + NSC P+ + CP C C
Sbjct: 702 IQDVAIQDFTCD-----------------DGNDDNSCSPLSR----------CPTECTCL 734
Query: 303 DGIVDCREKGLNKVPILLPEATTEL-----TYMV---SIDRVDKVLLYSYISNNFKRWTN 354
D +V C KGL +P +P TEL +M+ + + L +N +N
Sbjct: 735 DTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFMLVPKELSNYKHLTLIDLSNNRISTLSN 794
Query: 355 RSRR---------LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+S L N + +PP+ F K LR + L NDI+ +P AF + L +
Sbjct: 795 QSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHL 854
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 132/277 (47%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 636 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 695
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 696 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPTECTCLDTVVRCSNKGLKVLPKGIP 753
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N L PK +NYK L IDLS N+IS ++ +F
Sbjct: 754 RDVTELYLDGNQFM-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 812
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 813 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 872
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 873 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 909
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQ LK L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRLDLSENQI 139
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF + K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRL 132
>gi|410917606|ref|XP_003972277.1| PREDICTED: slit homolog 1 protein-like [Takifugu rubripes]
Length = 1537
Score = 234 bits (597), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 150/453 (33%), Positives = 220/453 (48%), Gaps = 72/453 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ +P F + +LRT R+ NS CDCHL+WL WL++ LGLY +C P
Sbjct: 168 TLNNNNISSIPVSSFNHMPKLRTFRLHSNSLRCDCHLAWLSPWLRQRSSLGLYAQCSFPP 227
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGE-CA-AEPSCPHPCRCADGIVDCREKGLNKVPIL 121
++G N+ ++ + + CSG + C+ A SCP C C++ IVDCR +GL +P
Sbjct: 228 SLRGLNLAELRKSDLACSGHGGSAFVQPCSLASGSCPPMCSCSNNIVDCRGRGLTAIPAH 287
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLT------ 175
LPEA TE+RLEQN I +PP AF++YK+LRRIDLS NQIS++A+DAF GL++L
Sbjct: 288 LPEAMTEIRLEQNGIKSVPPGAFSSYKKLRRIDLSNNQISEIALDAFLGLRALNSLVLYG 347
Query: 176 ------------------S------------------------LTLNNNNLTYLPDGVFA 193
L+L +N + L G F+
Sbjct: 348 NKITELPASVFDGLTSLELLLLNANKIHCIRASLFKDLENLVLLSLYDNKIQSLAKGTFS 407
Query: 194 ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFK 253
L ++TL +++N FICDCH+ WL +L+ P +C +P + + I I ++F+
Sbjct: 408 SLHSIQTLHLAQNPFICDCHVKWLADFLRANPIETSGARCTSPRRLANKRIAQIKSNKFR 467
Query: 254 CSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL 313
CS Y + D H + EC ++P CP CRC +VDC L
Sbjct: 468 CSAKEQ------YLIPGAEDRH---------LSYECNSKPVCPAKCRCEANVVDCSNLRL 512
Query: 314 NKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPPKAF 372
K P LP T EL ++ D +L + + FK + L N I+E+ AF
Sbjct: 513 TKFPEHLPSFTEEL----RLNNNDLSVLEA--TGAFKGLLQLKKINLSNNKISEIEDGAF 566
Query: 373 ANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ I L N + + F + LR +
Sbjct: 567 DGATSVVEIHLTANHLESVRGSMFKGMEGLRML 599
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 145/294 (49%), Gaps = 55/294 (18%)
Query: 115 LNKVPILL---PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L ++P LL EA T L L +N I +P + F L+ + L KN IS + AF+ L
Sbjct: 102 LRQIPELLFQKNEALTRLDLSENVIQAIPRRTFRGATELKNLQLDKNHISCIEEGAFRAL 161
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ +P F + +LRT R+ NS CDCHL+WL WL++ LGLY
Sbjct: 162 RMLEVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNSLRCDCHLAWLSPWLRQRSSLGLYA 221
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C P ++G N+ ++ + + CSG + + CS A
Sbjct: 222 QCSFPPSLRGLNLAELRKSDLACSGHG----GSAFVQPCSL------------------A 259
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++ IVDCR +GL +P LPEA TE+
Sbjct: 260 SGSCPPMCSCSNNIVDCRGRGLTAIPAHLPEAMTEI------------------------ 295
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +PP AF++YK+LRRI L N I+E+ AF + L +
Sbjct: 296 ------RLEQNGIKSVPPGAFSSYKKLRRIDLSNNQISEIALDAFLGLRALNSL 343
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 121/460 (26%), Positives = 188/460 (40%), Gaps = 113/460 (24%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F+ L ++TL +++N FICDCH+ WL +L+ P +C +P
Sbjct: 392 SLYDNKIQSLAKGTFSSLHSIQTLHLAQNPFICDCHVKWLADFLRANPIETSGARCTSPR 451
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I ++F+CS + + EC ++P CP CRC +VDC
Sbjct: 452 RLANKRIAQIKSNKFRCSAKEQYLIPGAEDRHLSYECNSKPVCPAKCRCEANVVDCSNLR 511
Query: 115 LNKVPILLPEATTELRLEQNDITEL-PPKAFANYKRLRRIDLSKNQISKVAVDAF----- 168
L K P LP T ELRL ND++ L AF +L++I+LS N+IS++ AF
Sbjct: 512 LTKFPEHLPSFTEELRLNNNDLSVLEATGAFKGLLQLKKINLSNNKISEIEDGAFDGATS 571
Query: 169 -------------------QGLKSLTSLTLNNNNLTYLPDGVFAELFRLR---------- 199
+G++ L L L NN ++ L +G F L +R
Sbjct: 572 VVEIHLTANHLESVRGSMFKGMEGLRMLMLRNNKISCLHNGSFTGLNNVRLLSLYDNQLN 631
Query: 200 --------------TLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
TL + N F CDC LSW WL+ + +C +P+ ++ +
Sbjct: 632 TILPGSFDALPNLSTLNLLANPFNCDCRLSWFGVWLRSRHIVTGNPRCQSPAFLREIPLQ 691
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C + + G C P CP C C D +
Sbjct: 692 DVAVPDFRCEDDATQD------------------------DGSCGLGPQCPSQCTCMDSV 727
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L +P LP TEL L+ N T
Sbjct: 728 VRCSNKHLQALPRGLPRNVTEL------------------------------YLDGNQFT 757
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ PK A ++ L+ + L N I+ L +F+N +L +
Sbjct: 758 SV-PKELATFRFLQLVDLSNNKISFLSDDSFSNMSQLTTL 796
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 131/277 (47%), Gaps = 25/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F L L TL + N F CDC LSW WL+ + +C +P+
Sbjct: 624 SLYDNQLNTILPGSFDALPNLSTLNLLANPFNCDCRLSWFGVWLRSRHIVTGNPRCQSPA 683
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C + G C P CP C C D +V C K L +P LP
Sbjct: 684 FLREIPLQDVAVPDFRCEDDATQDDGSCGLGPQCPSQCTCMDSVVRCSNKHLQALPRGLP 743
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN--- 180
TEL L+ N T +P K A ++ L+ +DLS N+IS ++ D+F + LT+L L+
Sbjct: 744 RNVTELYLDGNQFTSVP-KELATFRFLQLVDLSNNKISFLSDDSFSNMSQLTTLILSYNA 802
Query: 181 ---------------------NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
N+++ L G+F ++ L L I N CDC L WL
Sbjct: 803 LRCIPPRALSGLRSLRLLSLHGNDISELQQGIFNDVASLSHLAIGANPLYCDCRLLWLSD 862
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C PS +G+ +L P F+C+G
Sbjct: 863 WVKSGYKEPGIARCAGPSGTEGKLLLTTPTDSFQCNG 899
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 59/111 (53%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP PC C VDC +G+ VP +P L L N++T + F+ KRLR + L
Sbjct: 14 ACPSPCSCLGNTVDCHGRGIYVVPKNIPRGAERLDLNGNNLTVISKMDFSGLKRLRVLHL 73
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
+NQIS V AF LK L L LN N L +P+ +F + L L +SEN
Sbjct: 74 MENQISTVERGAFDELKELERLRLNKNRLRQIPELLFQKNEALTRLDLSEN 124
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP PC C VDC +G+ VP +P L ++ + ++ + KR
Sbjct: 14 ACPSPCSCLGNTVDCHGRGIYVVPKNIPRGAERL----DLNGNNLTVISKMDFSGLKRL- 68
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R L +N I+ + AF K L R+RL +N + ++P F + L R+
Sbjct: 69 -RVLHLMENQISTVERGAFDELKELERLRLNKNRLRQIPELLFQKNEALTRL 119
>gi|345307723|ref|XP_001513256.2| PREDICTED: slit homolog 2 protein [Ornithorhynchus anatinus]
Length = 1489
Score = 234 bits (597), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 146/451 (32%), Positives = 215/451 (47%), Gaps = 69/451 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 141 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 200
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H+KG N+ ++ + EF CSG C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 201 HLKGHNVAEVQKREFVCSGHQSFMAPSCSV-LHCPAACTCSNNIVDCRGKGLTEIPTNLP 259
Query: 124 EATTELRLEQNDI------------------------TELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I +E P AF + L + L N+
Sbjct: 260 ETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGNK 319
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+++ VDAFQ L +L L+L +N L + G F+ L
Sbjct: 320 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 379
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 380 RAIQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 439
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
F P K +G+C A+ +CP CRC VDC + L+K
Sbjct: 440 AKEQY-------------FIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLSK 486
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P +P+ T EL ++ + +L + + FK+ R L N IT++ AF
Sbjct: 487 IPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINLSNNKITDIEEGAFEG 540
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ I L N + + K F + L+ +
Sbjct: 541 ASGVNEILLTSNRLENIRHKMFKGLESLKTL 571
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 145/294 (49%), Gaps = 58/294 (19%)
Query: 115 LNKVPILLPEATTEL---RLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L P LL T++L L +N I +P KAF ++ + L NQIS + AF+ L
Sbjct: 75 LQLFPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRAL 134
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT
Sbjct: 135 RDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYT 194
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C PSH+KG N+ ++ + EF CSG CS H
Sbjct: 195 QCMGPSHLKGHNVAEVQKREFVCSG-----HQSFMAPSCSV-LH---------------- 232
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
CP C C++ IVDCR KGL ++P LPE TE+
Sbjct: 233 ---CPAACTCSNNIVDCRGKGLTEIPTNLPETITEI------------------------ 265
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +PP AF+ YK+LRRI L N I+E P AF + L +
Sbjct: 266 ------RLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSL 313
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 133/462 (28%), Positives = 202/462 (43%), Gaps = 93/462 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++TL +++N FICDCHL WL +L P +C +P
Sbjct: 362 SLYDNKLQTIAKGTFSPLRAIQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 421
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K +G+C A+ +CP CRC VDC
Sbjct: 422 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSN 481
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG- 170
+ L+K+P +P+ T ELRL N+ T L F +LR+I+LS N+I+ + AF+G
Sbjct: 482 QKLSKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGAFEGA 541
Query: 171 -----------------------LKSLTS------------------------LTLNNNN 183
L+SL + L+L +N
Sbjct: 542 SGVNEILLTSNRLENIRHKMFKGLESLKTLMLRSNRISCVGNDSFTGLSSVRLLSLYDNQ 601
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N F C+CHL+WL WL++ + +C P +K
Sbjct: 602 ITTIAPGAFDTLHSLSTLNLLANPFNCNCHLAWLGDWLRKKRIVTGNPRCQKPYFLKEIP 661
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
I D+ +F C D + NSC P C AE C C D
Sbjct: 662 IQDVAIQDFTCD-----------------DGNDDNSC---SPLSRCPAE------CTCLD 695
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQND 363
+V C KGL +P +P+ TEL +D L+ +S N+K T L N
Sbjct: 696 TVVRCSNKGLKALPKAIPKDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNNR 748
Query: 364 ITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I+ L ++F+N +L + L N + +P + F K LR +
Sbjct: 749 ISTLSNQSFSNMTQLLTLILSYNRLRCIPTRTFDGLKSLRLL 790
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 135/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+CHL+WL WL++ + +C P
Sbjct: 596 SLYDNQITTIAPGAFDTLHSLSTLNLLANPFNCNCHLAWLGDWLRKKRIVTGNPRCQKPY 655
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 656 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPAECTCLDTVVRCSNKGLKALPKAIP 713
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
+ TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 714 KDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 772
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+GVF +L L L I N CDC++ WL
Sbjct: 773 LRCIPTRTFDGLKSLRLLSLHGNDISVVPEGVFNDLSALSHLAIGANPLYCDCNMQWLSD 832
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 833 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 869
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 117 KVPILLPEAT-TEL-----RLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQG 170
+ PI + E T EL L N+IT + FA + LR + L +N+IS + AFQ
Sbjct: 2 RTPICVSEETRIELLFQCQDLNGNNITRVTKTDFAGLRHLRVLQLMENKISTIERGAFQD 61
Query: 171 LKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
LK L L LN NNL P+ +F +L L +SEN
Sbjct: 62 LKELERLRLNRNNLQLFPELLFLGTSKLYRLDLSENQI 99
>gi|351714548|gb|EHB17467.1| Slit-like protein 2 protein [Heterocephalus glaber]
Length = 1529
Score = 234 bits (596), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 145/451 (32%), Positives = 208/451 (46%), Gaps = 93/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + EF CSG C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 241 HLRGHNVAEVQKREFVCSGHQSFMAPSCSV-LHCPAACTCSNNIVDCRGKGLTEIPTNLP 299
Query: 124 EATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I+EL P AF + L + L N+
Sbjct: 300 ETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 359
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+++ VDAFQ L +L L+L +N L + G F+ L
Sbjct: 360 ITELPKNLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 419
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 420 RAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 479
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
Y + D+ K +G+C A+ +CP CRC VDC + LNK
Sbjct: 480 AKEQ------YFIPGAEDYR-------SKLSGDCFADLACPEKCRCEGTTVDCSNQKLNK 526
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKA-FAN 374
+P +P+ T EL RL N+ T L F
Sbjct: 527 IPDHIPQYTAEL------------------------------RLNNNEFTVLEATGIFKK 556
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+LR+I N IT++ AF + M
Sbjct: 557 LPQLRKINFSNNKITDIEEGAFEGASGVNEM 587
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 139/277 (50%), Gaps = 55/277 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 132 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 191
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++
Sbjct: 192 VASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQ 251
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CSG CS H CP C C++ IVDC
Sbjct: 252 KREFVCSG-----HQSFMAPSCSV-LH-------------------CPAACTCSNNIVDC 286
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 287 RGKGLTEIPTNLPETITEI------------------------------RLEQNSIKVIP 316
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 317 PGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 353
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 131/481 (27%), Positives = 203/481 (42%), Gaps = 107/481 (22%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 402 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 461
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K +G+C A+ +CP CRC VDC
Sbjct: 462 RLANKRIGQIKSKKFRCSAKEQYFIPGAEDYRSKLSGDCFADLACPEKCRCEGTTVDCSN 521
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG- 170
+ LNK+P +P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 522 QKLNKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGA 581
Query: 171 -----------------------LKSLTS------------------------LTLNNNN 183
L+SL + L+L +N
Sbjct: 582 SGVNEMLLTSNRLENVRHTMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQ 641
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N F C+C+L+WL WL++ + +C P +K
Sbjct: 642 ITTIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIP 701
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCA 302
I D+ +F C D + NSC P+ + CP C C
Sbjct: 702 IQDVAIQDFTCD-----------------DGNDDNSCSPLSR----------CPTECTCL 734
Query: 303 DGIVDCREKGLNKVPILLPEATTELTYMVS---------IDRVDKVLLYSYISNNFKRWT 353
D +V C KGL +P +P TEL Y+ + + L +N +
Sbjct: 735 DTVVRCSNKGLKVLPKGIPRDVTEL-YLDGNHFTLVPKELSNYKHLTLIDLSNNRISTLS 793
Query: 354 NRSRR---------LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRR 404
N+S L N + +PP+ F K LR + L NDI+ +P AF++ L
Sbjct: 794 NQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFSDLSALSH 853
Query: 405 M 405
+
Sbjct: 854 L 854
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 134/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 636 SLYDNQITTIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 695
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 696 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPTECTCLDTVVRCSNKGLKVLPKGIP 753
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 754 RDVTELYLDGNHFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 812
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F++L L L I N CDC++ WL
Sbjct: 813 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFSDLSALSHLAIGANPLHCDCNMQWLSD 872
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 873 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFICQG 909
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VATQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+I+ + AFQ LK L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKITAIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRLDLSENQI 139
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VATQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N IT + AF + K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKITAIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRL 132
>gi|449500994|ref|XP_004176655.1| PREDICTED: LOW QUALITY PROTEIN: slit homolog 2 protein [Taeniopygia
guttata]
Length = 1443
Score = 234 bits (596), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 147/451 (32%), Positives = 213/451 (47%), Gaps = 69/451 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 95 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 154
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + EF CSG C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 155 HLRGHNVAEVQKREFVCSGHQSFMAPSCSV-LHCPTACTCSNNIVDCRGKGLTEIPTNLP 213
Query: 124 EATTELRLEQNDI------------------------TELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I +E P AF + L + L N+
Sbjct: 214 ETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGNK 273
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+++ VDAFQ L +L L+L +N L + G F+ L
Sbjct: 274 ITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 333
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 334 RAIQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 393
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
F P K +G+C A+ +CP CRC VDC + LNK
Sbjct: 394 AKEQY-------------FIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNK 440
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P +P+ T EL + VL + I FK+ R L N IT++ AF
Sbjct: 441 IPDHIPQYTAELRLN---NNEFSVLEATGI---FKKLPQLRKINLSNNKITDIEEGAFDG 494
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L N + + K F + L+ +
Sbjct: 495 ASGVNELLLTSNRLESVQHKMFKGLESLKTL 525
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 138/277 (49%), Gaps = 55/277 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 46 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 105
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++
Sbjct: 106 VASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQ 165
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CSG CS H CP C C++ IVDC
Sbjct: 166 KREFVCSG-----HQSFMAPSCSV-LH-------------------CPTACTCSNNIVDC 200
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 201 RGKGLTEIPTNLPETITEI------------------------------RLEQNSIKVIP 230
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRRI L N I+E P AF + L +
Sbjct: 231 PGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSL 267
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 132/462 (28%), Positives = 201/462 (43%), Gaps = 93/462 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++TL +++N FICDCHL WL +L P +C +P
Sbjct: 316 SLYDNKLQTIAKGTFSPLRAIQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 375
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K +G+C A+ +CP CRC VDC
Sbjct: 376 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSN 435
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAF--- 168
+ LNK+P +P+ T ELRL N+ + L F +LR+I+LS N+I+ + AF
Sbjct: 436 QKLNKIPDHIPQYTAELRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGA 495
Query: 169 ---------------------QGLKSLTS------------------------LTLNNNN 183
+GL+SL + L+L +N
Sbjct: 496 SGVNELLLTSNRLESVQHKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQ 555
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N F C+CHL+ L WL++ + +C P +K
Sbjct: 556 ITTVAPGSFDTLHSLSTLNLLANPFNCNCHLAXLGDWLRKKRIVTGNPRCQKPYFLKEIP 615
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
I D+ +F C D + NSC P C AE C C D
Sbjct: 616 IQDVAIQDFTCD-----------------DGNDDNSC---SPLARCPAE------CTCLD 649
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQND 363
+V C KGL +P +P+ TEL +D L+ +S N+K T L N
Sbjct: 650 TVVRCSNKGLKALPKGIPKDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNNR 702
Query: 364 ITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I+ L ++F+N +L + L N + +P + F K LR +
Sbjct: 703 ISTLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLL 744
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+CHL+ L WL++ + +C P
Sbjct: 550 SLYDNQITTVAPGSFDTLHSLSTLNLLANPFNCNCHLAXLGDWLRKKRIVTGNPRCQKPY 609
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 610 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLARCPAECTCLDTVVRCSNKGLKALPKGIP 667
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
+ TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 668 KDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 726
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 727 LRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 786
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 787 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 823
>gi|426231497|ref|XP_004009775.1| PREDICTED: slit homolog 2 protein isoform 4 [Ovis aries]
Length = 1526
Score = 233 bits (595), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 146/454 (32%), Positives = 218/454 (48%), Gaps = 79/454 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPS---CPHPCRCADGIVDCREKGLNKVPI 120
H++G N+ ++ + EF CS E A S CP C C++ IVDCR KGL ++P
Sbjct: 241 HLRGHNVAEVQKREFVCSDEEEGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPT 300
Query: 121 LLPEATTELRLEQNDI------------------------TELPPKAFANYKRLRRIDLS 156
LPE TE+RLEQN I +EL P AF + L + L
Sbjct: 301 NLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLY 360
Query: 157 KNQISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
N+I+++ VDAFQ L +L L+L +N L + G F
Sbjct: 361 GNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTF 420
Query: 193 AELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
+ L ++T+ +++N FICDCHL WL +L P +C +P + + I I +F
Sbjct: 421 SPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKF 480
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CSG+ + RSK+ +G+C A+ +CP CRC VDC +
Sbjct: 481 RCSGTE-DYRSKL--------------------SGDCFADLACPEKCRCEGTTVDCSNQK 519
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKA 371
L K+P +P+ T EL ++ + +L + + FK+ R N IT++ A
Sbjct: 520 LTKIPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGA 573
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + I L N + + K F + L+ +
Sbjct: 574 FEGASGVNEILLTSNRLENVQHKMFKGLESLKTL 607
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 146/294 (49%), Gaps = 54/294 (18%)
Query: 115 LNKVPILLPEATTEL---RLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L P LL T++L L +N I +P KAF ++ + L NQIS + AF+ L
Sbjct: 115 LQLFPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRAL 174
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT
Sbjct: 175 RDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYT 234
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C PSH++G N+ ++ + EF CS E CS H
Sbjct: 235 QCMGPSHLRGHNVAEVQKREFVCSDEE-EGHQSFMAPSCSV-LH---------------- 276
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
CP C C++ IVDCR KGL ++P LPE TE+
Sbjct: 277 ---CPAACTCSNNIVDCRGKGLTEIPTNLPETITEI------------------------ 309
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +PP AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 310 ------RLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 357
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 131/454 (28%), Positives = 200/454 (44%), Gaps = 85/454 (18%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 406 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 465
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K +G+C A+ +CP CRC VDC + L K+P
Sbjct: 466 RLANKRIGQIKSKKFRCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLTKIPD 525
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--------- 170
+P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 526 HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILL 585
Query: 171 ---------------LKSLTS------------------------LTLNNNNLTYLPDGV 191
L+SL + L+L +N +T + G
Sbjct: 586 TSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQITTIAPGA 645
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L TL + N F C+C+L+WL WL++ + +C P +K I D+ +
Sbjct: 646 FDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQD 705
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C D + NSC P C AE C C D +V C K
Sbjct: 706 FTCD-----------------DGNDDNSC---SPLSRCPAE------CTCLDTVVRCSNK 739
Query: 312 GLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKA 371
L +P +P TEL +D L+ +S N+K T L N I+ L ++
Sbjct: 740 ALKVLPKGIPRDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNNRISTLSNQS 792
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F+N +L + L N + +PP+ F K LR +
Sbjct: 793 FSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 826
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 132/277 (47%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 632 SLYDNQITTIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 691
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C K L +P +P
Sbjct: 692 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPAECTCLDTVVRCSNKALKVLPKGIP 749
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 750 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 808
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 809 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLAALSHLAIGANPLYCDCNMQWLSD 868
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 869 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 905
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+I+ + AFQ LK L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRLDLSENQI 139
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N IT + AF + K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRL 132
>gi|224068202|ref|XP_002190033.1| PREDICTED: slit homolog 3 protein [Taeniopygia guttata]
Length = 1520
Score = 233 bits (595), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 149/475 (31%), Positives = 223/475 (46%), Gaps = 102/475 (21%)
Query: 5 LNNNNLTYLPDGVFAELF------------------------RLRTLRISENSFICDCHL 40
L+NN ++ + DG F L ++RTLR+ N CDCHL
Sbjct: 160 LDNNQISCIEDGAFRALRDLEILTLNNNNITRIPVTSFNHMPKIRTLRLHSNFLHCDCHL 219
Query: 41 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHP 100
+WL WL++ +G +T C AP ++G + ++ + +F CSG +P A+ +CP
Sbjct: 220 AWLSDWLRQRRTIGQFTFCLAPVGLRGFLVAEVQKKDFVCSGSPSEPPSCSASSITCPSA 279
Query: 101 CRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQI 160
C C++ +VDCR +GL ++P LPE E+RLEQN I +PP AF YK+L+RID+SKNQI
Sbjct: 280 CTCSNNVVDCRGRGLTEIPANLPEDIWEIRLEQNLIKIIPPGAFTQYKKLKRIDISKNQI 339
Query: 161 SKVAVDAFQGLKSLTSLTLNNNNLTYLPD------------------------------- 189
+ +A DAF+GLKSL SL L N +T +P
Sbjct: 340 TDIAPDAFKGLKSLISLVLYGNKITEIPQGLFDDLVSLQLLLLNANKINCLRVNTFQGLH 399
Query: 190 -----------------GVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTK 232
G+FA L ++TL +++N F+CDCHL WL +L+ P +
Sbjct: 400 NLKLLSLYDNKLQTVSKGLFAPLRSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGAR 459
Query: 233 CFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAE 292
C P + + I I +F+CSGS + RSK TG+C +
Sbjct: 460 CSNPRRLANKRISQIKSKKFRCSGSE-DYRSKF--------------------TGKCFMD 498
Query: 293 PSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKR 351
CP CRC +VDC + L ++P LPE TT+L + I ++ V L FK+
Sbjct: 499 LVCPEKCRCEGTVVDCSNQKLARLPTHLPEYTTDLRLNDNDISVLEAVGL-------FKK 551
Query: 352 WTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R L N I E+ AF ++ + L +N + + + F L+ +
Sbjct: 552 LPNLRKINLSNNKIKEIREGAFDGASGVQELILTENQLESVHGRMFRGLTGLKTL 606
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 133/473 (28%), Positives = 207/473 (43%), Gaps = 100/473 (21%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C P
Sbjct: 405 SLYDNKLQTVSKGLFAPLRSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSNPR 464
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K TG+C + CP CRC +VDC + L ++P
Sbjct: 465 RLANKRISQIKSKKFRCSGSEDYRSKFTGKCFMDLVCPEKCRCEGTVVDCSNQKLARLPT 524
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVDA--------- 167
LPE TT+LRL NDI+ L F LR+I+LS N+I ++ A D
Sbjct: 525 HLPEYTTDLRLNDNDISVLEAVGLFKKLPNLRKINLSNNKIKEIREGAFDGASGVQELIL 584
Query: 168 ------------FQGLKSLTSLTLNNNNLTYLPD------------------------GV 191
F+GL L +L L +N+++ + + G
Sbjct: 585 TENQLESVHGRMFRGLTGLKTLMLRSNSISCINNDTFAGLSSVRLLSLYDNHISTITPGA 644
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F+ L L T+ + NSF C+CHL+WL +WL++ + +C P +K I D+ +
Sbjct: 645 FSTLVSLSTINLLANSFNCNCHLAWLGKWLRKKRIVSGNPRCLKPFFLKDIPIQDVDVQD 704
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ + C P CP C C D +V C K
Sbjct: 705 FTCDGNDESS---------------------------CLLSPPCPSQCTCVDSVVRCSNK 737
Query: 312 GLNKVPILLPEATTEL-----------------TYMVSIDRVDKVLLYSYISNN-FKRWT 353
GL +P +P+ TEL ++ ID + + S ++N+ F T
Sbjct: 738 GLRMLPKGIPKDVTELYLEGNHLPAVPKGLSAFRHLTLIDLSNNSI--SVLANHTFSNMT 795
Query: 354 NRSRR-LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
S L N + +P AF + LR + L NDI+ +P +F + L +
Sbjct: 796 QLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLVSLSHL 848
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 155/326 (47%), Gaps = 37/326 (11%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N+++ + G F+ L L T+ + NSF C+CHL+WL +WL++ + +C P
Sbjct: 631 SLYDNHISTITPGAFSTLVSLSTINLLANSFNCNCHLAWLGKWLRKKRIVSGNPRCLKPF 690
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C D +V C KGL +P +P
Sbjct: 691 FLKDIPIQDVDVQDFTCDGNDES---SCLLSPPCPSQCTCVDSVVRCSNKGLRMLPKGIP 747
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVA------------------- 164
+ TEL LE N + +P K + ++ L IDLS N IS +A
Sbjct: 748 KDVTELYLEGNHLPAVP-KGLSAFRHLTLIDLSNNSISVLANHTFSNMTQLSTLILSYNR 806
Query: 165 -----VDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
V AF GL+SL LTL+ N+++ +P+G F +L L L + N CDCHL WL
Sbjct: 807 LRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLVSLSHLALGTNPLHCDCHLRWLSE 866
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
W+K + +C P + + +L P H F+C E +C +P S
Sbjct: 867 WVKAGYKEPGIARCRGPEAMVDRLLLTTPSHHFQCK----EPVDLSVVSKC----NPCLS 918
Query: 280 CPVEKPTGECAAEPSCPHPCRCADGI 305
P K G C+++P + C C G
Sbjct: 919 SPC-KNNGTCSSDPVELYQCTCPFGF 943
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/291 (34%), Positives = 145/291 (49%), Gaps = 57/291 (19%)
Query: 115 LNKVPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL + T T L L +N I +P KAF ++ + L NQIS + AF+ L
Sbjct: 117 LQVLPELLFQNTQKLTRLDLSENQIKGIPRKAFRGIIDVKNLQLDNNQISCIEDGAFRAL 176
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T +P F + ++RTLR+ N CDCHL+WL WL++ +G +T
Sbjct: 177 RDLEILTLNNNNITRIPVTSFNHMPKIRTLRLHSNFLHCDCHLAWLSDWLRQRRTIGQFT 236
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
C AP ++G + ++ + +F CSGS P E P+ A+
Sbjct: 237 FCLAPVGLRGFLVAEVQKKDFVCSGS-----------------------PSEPPSCS-AS 272
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
+CP C C++ +VDCR +GL ++P LPE E+
Sbjct: 273 SITCPSACTCSNNVVDCRGRGLTEIPANLPEDIWEI------------------------ 308
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
RLEQN I +PP AF YK+L+RI + +N IT++ P AF K L
Sbjct: 309 ------RLEQNLIKIIPPGAFTQYKKLKRIDISKNQITDIAPDAFKGLKSL 353
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTY-MVSIDRVDKVLLYSYISNNFKRW 352
CPH C C VDC GL VP +P L +I R+ K +F
Sbjct: 29 GCPHKCTCIASNVDCHGLGLKTVPRDIPRNAERLDLEKNNITRITKT--------DFTGL 80
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R LE+N I+ + AF + K+L R+RL +N + LP F N ++L R+
Sbjct: 81 KNLRVLHLEENQISVIERGAFQDLKQLERLRLNKNKLQVLPELLFQNTQKLTRL 134
>gi|426231493|ref|XP_004009773.1| PREDICTED: slit homolog 2 protein isoform 2 [Ovis aries]
Length = 1530
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 144/451 (31%), Positives = 214/451 (47%), Gaps = 69/451 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + EF CSG C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 241 HLRGHNVAEVQKREFVCSGHQSFMAPSCSV-LHCPAACTCSNNIVDCRGKGLTEIPTNLP 299
Query: 124 EATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I+EL P AF + L + L N+
Sbjct: 300 ETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 359
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+++ VDAFQ L +L L+L +N L + G F+ L
Sbjct: 360 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 419
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 420 RAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 479
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
F P K +G+C A+ +CP CRC VDC + L K
Sbjct: 480 AKEQY-------------FIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLTK 526
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P +P+ T EL ++ + +L + + FK+ R N IT++ AF
Sbjct: 527 IPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGAFEG 580
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ I L N + + K F + L+ +
Sbjct: 581 ASGVNEILLTSNRLENVQHKMFKGLESLKTL 611
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 146/294 (49%), Gaps = 58/294 (19%)
Query: 115 LNKVPILLPEATTEL---RLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L P LL T++L L +N I +P KAF ++ + L NQIS + AF+ L
Sbjct: 115 LQLFPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRAL 174
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT
Sbjct: 175 RDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYT 234
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C PSH++G N+ ++ + EF CSG CS H
Sbjct: 235 QCMGPSHLRGHNVAEVQKREFVCSG-----HQSFMAPSCSV-LH---------------- 272
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
CP C C++ IVDCR KGL ++P LPE TE+
Sbjct: 273 ---CPAACTCSNNIVDCRGKGLTEIPTNLPETITEI------------------------ 305
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +PP AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 306 ------RLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 353
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 199/462 (43%), Gaps = 93/462 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 402 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 461
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K +G+C A+ +CP CRC VDC
Sbjct: 462 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSN 521
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG- 170
+ L K+P +P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 522 QKLTKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGA 581
Query: 171 -----------------------LKSLTS------------------------LTLNNNN 183
L+SL + L+L +N
Sbjct: 582 SGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQ 641
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N F C+C+L+WL WL++ + +C P +K
Sbjct: 642 ITTIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIP 701
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
I D+ +F C D + NSC P C AE C C D
Sbjct: 702 IQDVAIQDFTCD-----------------DGNDDNSC---SPLSRCPAE------CTCLD 735
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQND 363
+V C K L +P +P TEL +D L+ +S N+K T L N
Sbjct: 736 TVVRCSNKALKVLPKGIPRDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNNR 788
Query: 364 ITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I+ L ++F+N +L + L N + +PP+ F K LR +
Sbjct: 789 ISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 830
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 132/277 (47%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 636 SLYDNQITTIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 695
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C K L +P +P
Sbjct: 696 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPAECTCLDTVVRCSNKALKVLPKGIP 753
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 754 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 812
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 813 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLAALSHLAIGANPLYCDCNMQWLSD 872
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 873 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 909
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+I+ + AFQ LK L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRLDLSENQI 139
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N IT + AF + K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRL 132
>gi|296486653|tpg|DAA28766.1| TPA: slit homolog 2 isoform 1 [Bos taurus]
Length = 1530
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 144/451 (31%), Positives = 214/451 (47%), Gaps = 69/451 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + EF CSG C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 241 HLRGHNVAEVQKREFVCSGHQSFMAPSCSV-LHCPAACTCSNNIVDCRGKGLTEIPTNLP 299
Query: 124 EATTELRLEQNDI------------------------TELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I +EL P AF + L + L N+
Sbjct: 300 ETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 359
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+++ VDAFQ L +L L+L +N L + G F+ L
Sbjct: 360 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 419
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 420 RAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 479
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
F P K +G+C A+ +CP CRC VDC + L K
Sbjct: 480 AKEQY-------------FIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLTK 526
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P +P+ T EL ++ + +L + + FK+ R N IT++ AF
Sbjct: 527 IPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGAFEG 580
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ I L N + + K F + L+ +
Sbjct: 581 ASGVNEILLTSNRLENVQHKMFKGLESLKTL 611
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 145/294 (49%), Gaps = 58/294 (19%)
Query: 115 LNKVPILLPEATTEL---RLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L P LL T++L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 115 LQLFPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNHISCIEDGAFRAL 174
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT
Sbjct: 175 RDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYT 234
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C PSH++G N+ ++ + EF CSG CS H
Sbjct: 235 QCMGPSHLRGHNVAEVQKREFVCSG-----HQSFMAPSCSV-LH---------------- 272
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
CP C C++ IVDCR KGL ++P LPE TE+
Sbjct: 273 ---CPAACTCSNNIVDCRGKGLTEIPTNLPETITEI------------------------ 305
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +PP AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 306 ------RLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 353
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 199/462 (43%), Gaps = 93/462 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 402 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 461
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K +G+C A+ +CP CRC VDC
Sbjct: 462 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSN 521
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG- 170
+ L K+P +P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 522 QKLTKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGA 581
Query: 171 -----------------------LKSLTS------------------------LTLNNNN 183
L+SL + L+L +N
Sbjct: 582 SGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQ 641
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N F C+C+L+WL WL++ + +C P +K
Sbjct: 642 ITTIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIP 701
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
I D+ +F C D + NSC P C AE C C D
Sbjct: 702 IQDVAIQDFTCD-----------------DGNDDNSC---SPLSRCPAE------CTCLD 735
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQND 363
+V C K L +P +P TEL +D L+ +S N+K T L N
Sbjct: 736 TVVRCSNKALKVLPKGIPRDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNNR 788
Query: 364 ITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I+ L ++F+N +L + L N + +PP+ F K LR +
Sbjct: 789 ISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 830
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 132/277 (47%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 636 SLYDNQITTIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 695
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C K L +P +P
Sbjct: 696 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPAECTCLDTVVRCSNKALKVLPKGIP 753
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 754 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 812
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 813 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLAALSHLAIGANPLYCDCNMQWLSD 872
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 873 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 909
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+I+ + AFQ LK L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRLDLSENQI 139
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N IT + AF + K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRL 132
>gi|194209268|ref|XP_001498244.2| PREDICTED: slit homolog 2 protein isoform 1 [Equus caballus]
Length = 1530
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 144/451 (31%), Positives = 214/451 (47%), Gaps = 69/451 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + EF CSG C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 241 HLRGHNVAEVQKREFVCSGHQSFMAPSCSV-LHCPAACTCSNNIVDCRGKGLTEIPTNLP 299
Query: 124 EATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I+EL P AF + L + L N+
Sbjct: 300 ETITEIRLEQNSIKIIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 359
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+++ VDAFQ L +L L+L +N L + G F+ L
Sbjct: 360 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 419
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 420 RAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 479
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
F P K +G+C A+ +CP CRC VDC + L K
Sbjct: 480 AKEQY-------------FIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLTK 526
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P +P+ T EL ++ + +L + + FK+ R N IT++ AF
Sbjct: 527 IPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGAFEG 580
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ I L N + + K F + L+ +
Sbjct: 581 ASGVNEILLTSNRLENVQHKMFKGLESLKTL 611
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 146/294 (49%), Gaps = 58/294 (19%)
Query: 115 LNKVPILLPEATTEL---RLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L P LL T++L L +N I +P KAF ++ + L NQIS + AF+ L
Sbjct: 115 LQLFPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRAL 174
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT
Sbjct: 175 RDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYT 234
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C PSH++G N+ ++ + EF CSG CS H
Sbjct: 235 QCMGPSHLRGHNVAEVQKREFVCSG-----HQSFMAPSCSV-LH---------------- 272
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
CP C C++ IVDCR KGL ++P LPE TE+
Sbjct: 273 ---CPAACTCSNNIVDCRGKGLTEIPTNLPETITEI------------------------ 305
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +PP AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 306 ------RLEQNSIKIIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 353
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/463 (27%), Positives = 201/463 (43%), Gaps = 95/463 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 402 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 461
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K +G+C A+ +CP CRC VDC
Sbjct: 462 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSN 521
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG- 170
+ L K+P +P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 522 QKLTKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGA 581
Query: 171 -----------------------LKSLTS------------------------LTLNNNN 183
L+SL + L+L +N
Sbjct: 582 SGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNESFIGLSSVRLLSLYDNQ 641
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N F C+C+L+WL WL++ + +C P +K
Sbjct: 642 ITTIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIP 701
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCA 302
I D+ +F C D + NSC P+ + CP C C
Sbjct: 702 IQDVAIQDFTCD-----------------DGNDDNSCSPLSR----------CPTECTCL 734
Query: 303 DGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQN 362
D +V C K L +P +P+ TEL +D L+ +S N+K T L N
Sbjct: 735 DTVVRCSNKALKVLPKGIPKDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNN 787
Query: 363 DITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I+ L ++F+N +L + L N + +PP+ F K LR +
Sbjct: 788 RISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 830
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 636 SLYDNQITTIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 695
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C K L +P +P
Sbjct: 696 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPTECTCLDTVVRCSNKALKVLPKGIP 753
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
+ TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 754 KDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 812
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 813 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 872
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 873 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 909
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+I+ + AFQ LK L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRLDLSENQI 139
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N IT + AF + K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRL 132
>gi|114593311|ref|XP_001163294.1| PREDICTED: slit homolog 2 protein isoform 3 [Pan troglodytes]
Length = 1525
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 146/454 (32%), Positives = 218/454 (48%), Gaps = 79/454 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPS---CPHPCRCADGIVDCREKGLNKVPI 120
H++G N+ ++ + EF CS E A S CP C C++ IVDCR KGL ++P
Sbjct: 241 HLRGHNVAEVQKREFVCSDEEEGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPT 300
Query: 121 LLPEATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLS 156
LPE TE+RLEQN I+EL P AF + L + L
Sbjct: 301 NLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLY 360
Query: 157 KNQISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
N+I+++ VDAFQ L +L L+L +N L + G F
Sbjct: 361 GNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTF 420
Query: 193 AELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
+ L ++T+ +++N FICDCHL WL +L P +C +P + + I I +F
Sbjct: 421 SPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKF 480
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CSG+ + RSK+ +G+C A+ +CP C C VDC +
Sbjct: 481 RCSGTE-DYRSKL--------------------SGDCFADLACPEKCHCEGTTVDCSNQK 519
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKA 371
LNK+P +P+ T EL ++ + +L + + FK+ R N IT++ A
Sbjct: 520 LNKIPEHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGA 573
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + I L N + + K F + L+ +
Sbjct: 574 FEGASGVNEILLTSNRLENVQHKMFKGLESLKTL 607
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 139/277 (50%), Gaps = 51/277 (18%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 132 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 191
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++
Sbjct: 192 VASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQ 251
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CS E CS H CP C C++ IVDC
Sbjct: 252 KREFVCSDEE-EGHQSFMAPSCSV-LH-------------------CPAACTCSNNIVDC 290
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 291 RGKGLTEIPTNLPETITEI------------------------------RLEQNTIKVIP 320
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 321 PGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 357
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 131/455 (28%), Positives = 202/455 (44%), Gaps = 87/455 (19%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 406 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 465
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K +G+C A+ +CP C C VDC + LNK+P
Sbjct: 466 RLANKRIGQIKSKKFRCSGTEDYRSKLSGDCFADLACPEKCHCEGTTVDCSNQKLNKIPE 525
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--------- 170
+P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 526 HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILL 585
Query: 171 ---------------LKSLTS------------------------LTLNNNNLTYLPDGV 191
L+SL + L+L +N +T + G
Sbjct: 586 TSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGA 645
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L TL + N F C+C+L+WL WL++ + +C P +K I D+ +
Sbjct: 646 FDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQD 705
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCADGIVDCRE 310
F C D + NSC P+ + CP C C D +V C
Sbjct: 706 FTCD-----------------DGNDDNSCSPLSR----------CPTECTCLDTVVRCSN 738
Query: 311 KGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPK 370
KGL +P +P TEL +D L+ +S N+K T L N I+ L +
Sbjct: 739 KGLKVLPKGIPRDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNNRISTLSNQ 791
Query: 371 AFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+F+N +L + L N + +PP+ F K LR +
Sbjct: 792 SFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 826
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 632 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 691
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 692 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPTECTCLDTVVRCSNKGLKVLPKGIP 749
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 750 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 808
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 809 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 868
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 869 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 905
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQ LK L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRLDLSENQI 139
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF + K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRL 132
>gi|441664264|ref|XP_004091750.1| PREDICTED: LOW QUALITY PROTEIN: slit homolog 2 protein [Nomascus
leucogenys]
Length = 1617
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 146/454 (32%), Positives = 215/454 (47%), Gaps = 71/454 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPS---CPHPCRCADGIVDCREKGLNKVPI 120
H++G N+ ++ + EF CS E A S CP C C++ IVDCR KGL ++P
Sbjct: 241 HLRGHNVAEVQKREFVCSDEEEGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPT 300
Query: 121 LLPEATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLS 156
LPE TE+RLEQN I+EL P AF + L + L
Sbjct: 301 NLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLY 360
Query: 157 KNQISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
N+I+++ VDAFQ L +L L+L +N L + G F
Sbjct: 361 GNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTF 420
Query: 193 AELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
+ L ++T+ +++N FICDCHL WL +L P +C +P + + I I +F
Sbjct: 421 SPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKF 480
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CS F P K +G+C A+ +CP CRC VDC +
Sbjct: 481 RCSAKEQY-------------FIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQK 527
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKA 371
LNK+P +P+ T EL ++ + +L + + FK+ R N IT++ A
Sbjct: 528 LNKIPEHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGA 581
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + I L N + + K F + L+ +
Sbjct: 582 FEGASGVNEILLTSNRLENVQHKMFKGLESLKTL 615
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 139/277 (50%), Gaps = 51/277 (18%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 132 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 191
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++
Sbjct: 192 VASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQ 251
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CS E CS H CP C C++ IVDC
Sbjct: 252 KREFVCSDEE-EGHQSFMAPSCSV-LH-------------------CPAACTCSNNIVDC 290
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 291 RGKGLTEIPTNLPETITEI------------------------------RLEQNTIKVIP 320
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 321 PGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 357
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 130/463 (28%), Positives = 201/463 (43%), Gaps = 95/463 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 406 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 465
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K +G+C A+ +CP CRC VDC
Sbjct: 466 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSN 525
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG- 170
+ LNK+P +P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 526 QKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGA 585
Query: 171 -----------------------LKSLTS------------------------LTLNNNN 183
L+SL + L+L +N
Sbjct: 586 SGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQ 645
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N F C+C+L+WL WL++ + +C P +K
Sbjct: 646 ITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIP 705
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCA 302
I D+ +F C D + NSC P+ + CP C C
Sbjct: 706 IQDVAIQDFTCD-----------------DGNDDNSCSPLSR----------CPTECACL 738
Query: 303 DGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQN 362
D +V C KGL +P +P TEL +D L+ +S N+K T L N
Sbjct: 739 DTVVRCSNKGLKVLPKGIPRDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNN 791
Query: 363 DITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I+ L ++F+N +L + L N + +P + F K LR +
Sbjct: 792 RISTLSNQSFSNMTQLLTLILSYNRLRCIPHRTFDGLKSLRLL 834
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 640 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 699
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 700 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPTECACLDTVVRCSNKGLKVLPKGIP 757
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 758 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 816
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 817 LRCIPHRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 876
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 877 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 913
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQ LK L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRLDLSENQI 139
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF + K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRL 132
>gi|397513115|ref|XP_003826870.1| PREDICTED: slit homolog 2 protein isoform 4 [Pan paniscus]
Length = 1542
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 146/454 (32%), Positives = 215/454 (47%), Gaps = 71/454 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPS---CPHPCRCADGIVDCREKGLNKVPI 120
H++G N+ ++ + EF CS E A S CP C C++ IVDCR KGL ++P
Sbjct: 241 HLRGHNVAEVQKREFVCSDEEEGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPT 300
Query: 121 LLPEATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLS 156
LPE TE+RLEQN I+EL P AF + L + L
Sbjct: 301 NLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLY 360
Query: 157 KNQISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
N+I+++ VDAFQ L +L L+L +N L + G F
Sbjct: 361 GNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTF 420
Query: 193 AELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
+ L ++T+ +++N FICDCHL WL +L P +C +P + + I I +F
Sbjct: 421 SPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKF 480
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CS F P K +G+C A+ +CP CRC VDC +
Sbjct: 481 RCSAKEQY-------------FIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQK 527
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKA 371
LNK+P +P+ T EL ++ + +L + + FK+ R N IT++ A
Sbjct: 528 LNKIPEHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGA 581
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + I L N + + K F + L+ +
Sbjct: 582 FEGASGVNEILLTSNRLENVQHKMFKGLESLKTL 615
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 139/277 (50%), Gaps = 51/277 (18%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 132 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 191
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++
Sbjct: 192 VASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQ 251
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CS E CS H CP C C++ IVDC
Sbjct: 252 KREFVCSDEE-EGHQSFMAPSCSV-LH-------------------CPAACTCSNNIVDC 290
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 291 RGKGLTEIPTNLPETITEI------------------------------RLEQNTIKVIP 320
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 321 PGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 357
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 131/480 (27%), Positives = 203/480 (42%), Gaps = 105/480 (21%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 406 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 465
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K +G+C A+ +CP CRC VDC
Sbjct: 466 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSN 525
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG- 170
+ LNK+P +P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 526 QKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGA 585
Query: 171 -----------------------LKSLTS------------------------LTLNNNN 183
L+SL + L+L +N
Sbjct: 586 SGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQ 645
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N F C+C+L+WL WL++ + +C P +K
Sbjct: 646 ITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIP 705
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCA 302
I D+ +F C D + NSC P+ + CP C C
Sbjct: 706 IQDVAIQDFTCD-----------------DGNDDNSCSPLSR----------CPTECTCL 738
Query: 303 DGIVDCREKGLNKVPILLPEATTEL-----TYMV---SIDRVDKVLLYSYISNNFKRWTN 354
D +V C KGL +P +P TEL +M+ + + L +N +N
Sbjct: 739 DTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFMLVPKELSNYKHLTLIDLSNNRISTLSN 798
Query: 355 RSRR---------LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+S L N + +PP+ F K LR + L NDI+ +P AF + L +
Sbjct: 799 QSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHL 858
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 132/277 (47%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 640 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 699
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 700 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPTECTCLDTVVRCSNKGLKVLPKGIP 757
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N L PK +NYK L IDLS N+IS ++ +F
Sbjct: 758 RDVTELYLDGNQFM-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 816
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 817 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 876
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 877 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 913
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQ LK L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRLDLSENQI 139
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF + K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRL 132
>gi|187956493|gb|AAI50780.1| Slit2 protein [Mus musculus]
gi|219841806|gb|AAI45488.1| Slit2 protein [Mus musculus]
Length = 1542
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 146/454 (32%), Positives = 215/454 (47%), Gaps = 71/454 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPS---CPHPCRCADGIVDCREKGLNKVPI 120
H++G N+ ++ + EF CS E A S CP C C++ IVDCR KGL ++P
Sbjct: 241 HLRGHNVAEVQKREFVCSDEEEGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPT 300
Query: 121 LLPEATTELRLEQNDI------------------------TELPPKAFANYKRLRRIDLS 156
LPE TE+RLEQN I +EL P AF + L + L
Sbjct: 301 NLPETITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLY 360
Query: 157 KNQISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
N+I+++ VDAFQ L +L L+L +N L + G F
Sbjct: 361 GNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTF 420
Query: 193 AELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
+ L ++T+ +++N FICDCHL WL +L P +C +P + + I I +F
Sbjct: 421 SALRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKF 480
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CS F P K +G+C A+ +CP CRC VDC +
Sbjct: 481 RCSAKEQY-------------FIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQR 527
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKA 371
LNK+P +P+ T EL ++ + +L + + FK+ R N IT++ A
Sbjct: 528 LNKIPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGA 581
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + I L N + + K F + L+ +
Sbjct: 582 FEGASGVNEILLTSNRLENVQHKMFKGLESLKTL 615
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 139/277 (50%), Gaps = 51/277 (18%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 132 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 191
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++
Sbjct: 192 VASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQ 251
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CS E CS H CP C C++ IVDC
Sbjct: 252 KREFVCSDEE-EGHQSFMAPSCSV-LH-------------------CPAACTCSNNIVDC 290
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 291 RGKGLTEIPTNLPETITEI------------------------------RLEQNSIRVIP 320
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRR+ L N I+EL P AF + L +
Sbjct: 321 PGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSL 357
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 133/463 (28%), Positives = 203/463 (43%), Gaps = 95/463 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 406 SLYDNKLQTVAKGTFSALRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 465
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K +G+C A+ +CP CRC VDC
Sbjct: 466 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSN 525
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG- 170
+ LNK+P +P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 526 QRLNKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGA 585
Query: 171 -----------------------LKSLTS------------------------LTLNNNN 183
L+SL + L+L +N
Sbjct: 586 SGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLGSVRLLSLYDNQ 645
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N F C+CHL+WL WL+R + +C P +K
Sbjct: 646 ITTVAPGAFDSLHSLSTLNLLANPFNCNCHLAWLGEWLRRKRIVTGNPRCQKPYFLKEIP 705
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCA 302
I D+ +F C D + NSC P+ + CP C C
Sbjct: 706 IQDVAIQDFTCD-----------------DGNDDNSCSPLSR----------CPSECTCL 738
Query: 303 DGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQN 362
D +V C KGL +P +P+ TEL +D L+ +S N+K T L N
Sbjct: 739 DTVVRCSNKGLKVLPKGIPKDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNN 791
Query: 363 DITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I+ L ++F+N +L + L N + +PP+ F K LR +
Sbjct: 792 RISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 834
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 134/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+CHL+WL WL+R + +C P
Sbjct: 640 SLYDNQITTVAPGAFDSLHSLSTLNLLANPFNCNCHLAWLGEWLRRKRIVTGNPRCQKPY 699
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 700 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPSECTCLDTVVRCSNKGLKVLPKGIP 757
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
+ TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 758 KDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 816
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 817 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 876
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 877 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 913
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKIDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQ LK L L LN NNL P+ +F +L L +SEN
Sbjct: 83 VLQLMENRISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQI 139
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K+ +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKI--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF + K L R+RL +N++ P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENRISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRL 132
>gi|449273505|gb|EMC82999.1| Slit like protein 2 protein, partial [Columba livia]
Length = 1397
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 147/451 (32%), Positives = 213/451 (47%), Gaps = 69/451 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 49 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 108
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + EF CSG C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 109 HLRGHNVAEVQKREFVCSGHQSFMAPSCSV-LHCPTACTCSNNIVDCRGKGLTEIPTNLP 167
Query: 124 EATTELRLEQNDI------------------------TELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I +E P AF + L + L N+
Sbjct: 168 ETITEIRLEQNSIKIIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGNK 227
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+++ VDAFQ L +L L+L +N L + G F+ L
Sbjct: 228 ITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 287
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 288 RAIQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 347
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
F P K +G+C A+ +CP CRC VDC + LNK
Sbjct: 348 AKEQY-------------FIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNK 394
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P +P+ T EL + VL + I FK+ R L N IT++ AF
Sbjct: 395 IPDHIPQYTAELRLN---NNEFSVLEATGI---FKKLPQLRKINLSNNKITDIEEGAFDG 448
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L N + + K F + L+ +
Sbjct: 449 ASGVNELLLTSNRLESVRHKMFKGLESLKTL 479
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/275 (37%), Positives = 137/275 (49%), Gaps = 55/275 (20%)
Query: 131 LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDG 190
L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 2 LSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVA 61
Query: 191 VFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEH 250
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++ +
Sbjct: 62 SFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQKR 121
Query: 251 EFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCRE 310
EF CSG CS H CP C C++ IVDCR
Sbjct: 122 EFVCSG-----HQSFMAPSCSV-LH-------------------CPTACTCSNNIVDCRG 156
Query: 311 KGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPK 370
KGL ++P LPE TE+ RLEQN I +PP
Sbjct: 157 KGLTEIPTNLPETITEI------------------------------RLEQNSIKIIPPG 186
Query: 371 AFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
AF+ YK+LRRI L N I+E P AF + L +
Sbjct: 187 AFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSL 221
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 132/463 (28%), Positives = 203/463 (43%), Gaps = 95/463 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++TL +++N FICDCHL WL +L P +C +P
Sbjct: 270 SLYDNKLQTIAKGTFSPLRAIQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 329
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K +G+C A+ +CP CRC VDC
Sbjct: 330 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSN 389
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAF--- 168
+ LNK+P +P+ T ELRL N+ + L F +LR+I+LS N+I+ + AF
Sbjct: 390 QKLNKIPDHIPQYTAELRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGA 449
Query: 169 ---------------------QGLKSLTS------------------------LTLNNNN 183
+GL+SL + L+L +N
Sbjct: 450 SGVNELLLTSNRLESVRHKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQ 509
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N F C+CHL+WL WL++ + +C P +K
Sbjct: 510 ITTVAPGSFDTLHSLSTLNLLANPFNCNCHLAWLGDWLRKKRIVTGNPRCQKPYFLKEIP 569
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCA 302
I D+ +F C D + NSC P+ + CP C C
Sbjct: 570 IQDVAIQDFTCD-----------------DGNDDNSCSPLSR----------CPAECTCL 602
Query: 303 DGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQN 362
D +V C KGL +P +P+ TEL +D L+ +S N+K T L N
Sbjct: 603 DTVVRCSNKGLKALPKGIPKDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNN 655
Query: 363 DITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I+ L ++F+N +L + L N + +P + F K LR +
Sbjct: 656 RISTLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLL 698
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 134/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+CHL+WL WL++ + +C P
Sbjct: 504 SLYDNQITTVAPGSFDTLHSLSTLNLLANPFNCNCHLAWLGDWLRKKRIVTGNPRCQKPY 563
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 564 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPAECTCLDTVVRCSNKGLKALPKGIP 621
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
+ TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 622 KDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 680
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 681 LRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSSLSHLAIGANPLYCDCNMQWLSD 740
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 741 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 777
>gi|390460993|ref|XP_003732574.1| PREDICTED: slit homolog 2 protein [Callithrix jacchus]
Length = 1541
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 146/454 (32%), Positives = 215/454 (47%), Gaps = 71/454 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLFCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPS---CPHPCRCADGIVDCREKGLNKVPI 120
H++G N+ ++ + EF CS E A S CP C C++ IVDCR KGL ++P
Sbjct: 241 HLRGHNVAEVQKREFVCSDEEEGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPT 300
Query: 121 LLPEATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLS 156
LPE TE+RLEQN I+EL P AF + L + L
Sbjct: 301 NLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLY 360
Query: 157 KNQISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
N+I+++ VDAFQ L +L L+L +N L + G F
Sbjct: 361 GNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTF 420
Query: 193 AELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
+ L ++T+ +++N FICDCHL WL +L P +C +P + + I I +F
Sbjct: 421 SPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKF 480
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CS F P K +G+C A+ +CP CRC VDC +
Sbjct: 481 RCSAKEQY-------------FIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQK 527
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKA 371
LNK+P +P+ T EL ++ + +L + + FK+ R N IT++ A
Sbjct: 528 LNKIPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGA 581
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + I L N + + K F + L+ +
Sbjct: 582 FEGASGVNEILLTSNRLENVRHKMFKGLESLKTL 615
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 139/277 (50%), Gaps = 51/277 (18%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 132 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 191
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++
Sbjct: 192 VASFNHMPKLRTFRLHSNNLFCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQ 251
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CS E CS H CP C C++ IVDC
Sbjct: 252 KREFVCSDEE-EGHQSFMAPSCSV-LH-------------------CPAACTCSNNIVDC 290
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 291 RGKGLTEIPTNLPETITEI------------------------------RLEQNSIKVIP 320
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 321 PGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 357
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 200/462 (43%), Gaps = 93/462 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 406 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 465
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K +G+C A+ +CP CRC VDC
Sbjct: 466 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSN 525
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG- 170
+ LNK+P +P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 526 QKLNKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGA 585
Query: 171 -----------------------LKSLTS------------------------LTLNNNN 183
L+SL + L+L +N
Sbjct: 586 SGVNEILLTSNRLENVRHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQ 645
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N F C+C+L+WL WL++ + +C P +K
Sbjct: 646 ITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIP 705
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
I D+ +F C D + NS C+ CP C C D
Sbjct: 706 IQDVAIQDFTCD-----------------DGNDDNS---------CSPHSRCPTECTCLD 739
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQND 363
+V C KGL +P +P TEL +D L+ +S N+K T L N
Sbjct: 740 TVVRCSNKGLKVLPKGIPRDVTELY----LDGNQFTLIPKELS-NYKHLT--LIDLSNNR 792
Query: 364 ITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I+ L ++F+N +L + L N + +PP+ F K LR +
Sbjct: 793 ISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 834
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 640 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 699
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 700 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPHSRCPTECTCLDTVVRCSNKGLKVLPKGIP 757
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 758 RDVTELYLDGNQFT-LIPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 816
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 817 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 876
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 877 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 913
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 58/117 (49%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQ K L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKISAIERGAFQXXKELERLRLNRNHLQLFPELLFLGTAKLYRLDLSENQI 139
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKISAIERGAFQXXKELERLRLNRNHLQLFPELLFLGTAKLYRL 132
>gi|403271193|ref|XP_003927521.1| PREDICTED: slit homolog 2 protein isoform 2 [Saimiri boliviensis
boliviensis]
Length = 1532
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 146/454 (32%), Positives = 215/454 (47%), Gaps = 71/454 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPS---CPHPCRCADGIVDCREKGLNKVPI 120
H++G N+ ++ + EF CS E A S CP C C++ IVDCR KGL ++P
Sbjct: 241 HLRGHNVAEVQKREFVCSDEEEGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPT 300
Query: 121 LLPEATTELRLEQNDI------------------------TELPPKAFANYKRLRRIDLS 156
LPE TE+RLEQN I +EL P AF + L + L
Sbjct: 301 NLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLY 360
Query: 157 KNQISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
N+I+++ VDAFQ L +L L+L +N L + G F
Sbjct: 361 GNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTF 420
Query: 193 AELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
+ L ++T+ +++N FICDCHL WL +L P +C +P + + I I +F
Sbjct: 421 SPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKF 480
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CS F P K +G+C A+ +CP CRC VDC +
Sbjct: 481 RCSAKEQY-------------FIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQK 527
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKA 371
LNK+P +P+ T EL ++ + +L + + FK+ R N IT++ A
Sbjct: 528 LNKIPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGA 581
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + I L N + + K F + L+ +
Sbjct: 582 FEGASGVNEILLTSNRLENVQHKMFKGLESLKTL 615
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 139/277 (50%), Gaps = 51/277 (18%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 132 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 191
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++
Sbjct: 192 VASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQ 251
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CS E CS H CP C C++ IVDC
Sbjct: 252 KREFVCSDEE-EGHQSFMAPSCSV-LH-------------------CPAACTCSNNIVDC 290
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 291 RGKGLTEIPTNLPETITEI------------------------------RLEQNSIKVIP 320
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 321 PGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 357
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 200/462 (43%), Gaps = 93/462 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 406 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 465
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K +G+C A+ +CP CRC VDC
Sbjct: 466 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSN 525
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG- 170
+ LNK+P +P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 526 QKLNKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGA 585
Query: 171 -----------------------LKSLTS------------------------LTLNNNN 183
L+SL + L+L +N
Sbjct: 586 SGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQ 645
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N F C+C+L+WL WL++ + +C P +K
Sbjct: 646 ITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIP 705
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
I D+ +F C D + NS C+ CP C C D
Sbjct: 706 IQDVAIQDFTCD-----------------DGNDDNS---------CSPHSRCPTECTCLD 739
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQND 363
+V C KGL +P +P TEL +D L+ +S N+K T L N
Sbjct: 740 TVVRCSNKGLKVLPKGIPRDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNNR 792
Query: 364 ITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I+ L ++F+N +L + L N + +PP+ F K LR +
Sbjct: 793 ISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 834
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 640 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 699
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 700 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPHSRCPTECTCLDTVVRCSNKGLKVLPKGIP 757
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 758 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 816
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 817 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 876
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 877 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 913
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQ LK L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRLDLSENQI 139
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF + K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRL 132
>gi|73951939|ref|XP_854843.1| PREDICTED: slit homolog 2 protein [Canis lupus familiaris]
Length = 1530
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 144/451 (31%), Positives = 214/451 (47%), Gaps = 69/451 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + EF CSG C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 241 HLRGHNVAEVQKREFVCSGHQSFMAPSCSVL-HCPAACTCSNNIVDCRGKGLTEIPTNLP 299
Query: 124 EATTELRLEQNDI------------------------TELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I +EL P AF + L + L N+
Sbjct: 300 ETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 359
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+++ VDAFQ L +L L+L +N L + G F+ L
Sbjct: 360 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 419
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 420 RAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 479
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
F P K +G+C A+ +CP CRC VDC + L K
Sbjct: 480 AKEQY-------------FIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLTK 526
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P +P+ T EL ++ + +L + + FK+ R N IT++ AF
Sbjct: 527 IPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGAFEG 580
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ I L N + + K F + L+ +
Sbjct: 581 AAGVNEILLTSNRLENVQHKMFKGLESLKTL 611
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 146/294 (49%), Gaps = 58/294 (19%)
Query: 115 LNKVPILLPEATTEL---RLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L P LL T++L L +N I +P KAF ++ + L NQIS + AF+ L
Sbjct: 115 LQLFPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRAL 174
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT
Sbjct: 175 RDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYT 234
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C PSH++G N+ ++ + EF CSG CS H
Sbjct: 235 QCMGPSHLRGHNVAEVQKREFVCSG-----HQSFMAPSCSV-LH---------------- 272
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
CP C C++ IVDCR KGL ++P LPE TE+
Sbjct: 273 ---CPAACTCSNNIVDCRGKGLTEIPTNLPETITEI------------------------ 305
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +PP AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 306 ------RLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 353
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 131/479 (27%), Positives = 204/479 (42%), Gaps = 103/479 (21%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 402 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 461
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K +G+C A+ +CP CRC VDC
Sbjct: 462 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSN 521
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG- 170
+ L K+P +P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 522 QKLTKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGA 581
Query: 171 -----------------------LKSLTS------------------------LTLNNNN 183
L+SL + L+L +N
Sbjct: 582 AGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQ 641
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+ + G F L L TL + N F C+C+L+WL WL++ + +C P +K
Sbjct: 642 IATIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIP 701
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
I D+ +F C + ++ CS P + CP E C C D
Sbjct: 702 IQDVAIQDFTCDDGNDDS-------SCS----PLSRCPTE---------------CTCLD 735
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSY-------ISNN-FKRWTNR 355
+V C KGL +P +P TEL + + LY+Y +SNN +N+
Sbjct: 736 TVVRCSNKGLKVLPKGIPRDVTELYLDGNHFTLVPKELYNYKHLTLIDLSNNRISTLSNQ 795
Query: 356 SRR---------LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
S L N + +PP+ F K LR + L NDI+ +P AF++ L +
Sbjct: 796 SFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFSDLSALSHL 854
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 132/277 (47%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 636 SLYDNQIATIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 695
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 696 FLKEIPIQDVAIQDFTCDDGNDDSS--CSPLSRCPTECTCLDTVVRCSNKGLKVLPKGIP 753
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK NYK L IDLS N+IS ++ +F
Sbjct: 754 RDVTELYLDGNHFT-LVPKELYNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 812
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F++L L L I N CDC++ WL
Sbjct: 813 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFSDLSALSHLAIGANPLYCDCNMQWLSD 872
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 873 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 909
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 60/117 (51%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
AA +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 AAPQACPAQCSCSGSTVDCHGLALRSVPRSIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQ LK L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRLDLSENQI 139
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
AA +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 AAPQACPAQCSCSGSTVDCHGLALRSVPRSIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF + K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRL 132
>gi|395542983|ref|XP_003773402.1| PREDICTED: slit homolog 2 protein, partial [Sarcophilus harrisii]
Length = 1583
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 147/454 (32%), Positives = 215/454 (47%), Gaps = 71/454 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C P+
Sbjct: 233 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLFCDCHLAWLSDWLRQRPRVGLYTQCMGPN 292
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPS---CPHPCRCADGIVDCREKGLNKVPI 120
H+KG N+ ++ + EF CS E AA S CP C C++ IVDCR KGL ++P
Sbjct: 293 HLKGHNVAEVQKREFVCSDEEEGHQSFMAASCSVLHCPAACTCSNNIVDCRGKGLPEIPT 352
Query: 121 LLPEATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLS 156
LPE TE+RLEQN I+E+ P AF + L + L
Sbjct: 353 NLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEIAPDAFHGLRSLNSLVLY 412
Query: 157 KNQISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
N+I+++ VDAFQ L +L L+L +N L + G F
Sbjct: 413 GNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTF 472
Query: 193 AELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
A L ++TL +++N FICDCHL WL +L P +C +P + + I I +F
Sbjct: 473 APLRAIQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKF 532
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CS F P K +G+C A+ +CP CRC VDC +
Sbjct: 533 RCSAKEQY-------------FIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQK 579
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKA 371
L K+P +P+ T EL ++ + +L + + FK+ R N IT++ A
Sbjct: 580 LTKIPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGA 633
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + I L N + + K F + L+ +
Sbjct: 634 FEGASGVNEILLTSNRLENVRHKMFKGLESLKTL 667
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 107/294 (36%), Positives = 145/294 (49%), Gaps = 54/294 (18%)
Query: 115 LNKVPILLPEATTEL---RLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L P LL T++L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 167 LQLFPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNHISCIEDGAFRAL 226
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT
Sbjct: 227 RDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLFCDCHLAWLSDWLRQRPRVGLYT 286
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C P+H+KG N+ ++ + EF CS E CS H
Sbjct: 287 QCMGPNHLKGHNVAEVQKREFVCSDEE-EGHQSFMAASCSV-LH---------------- 328
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
CP C C++ IVDCR KGL ++P LPE TE+
Sbjct: 329 ---CPAACTCSNNIVDCRGKGLPEIPTNLPETITEI------------------------ 361
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +PP AF+ YK+LRRI L N I+E+ P AF + L +
Sbjct: 362 ------RLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEIAPDAFHGLRSLNSL 409
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 131/463 (28%), Positives = 202/463 (43%), Gaps = 95/463 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G FA L ++TL +++N FICDCHL WL +L P +C +P
Sbjct: 458 SLYDNKLQTIAKGTFAPLRAIQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 517
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K +G+C A+ +CP CRC VDC
Sbjct: 518 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSN 577
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG- 170
+ L K+P +P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 578 QKLTKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGA 637
Query: 171 -----------------------LKSLTS------------------------LTLNNNN 183
L+SL + L+L +N
Sbjct: 638 SGVNEILLTSNRLENVRHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQ 697
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N F C+C+L+WL WL++ + +C P +K
Sbjct: 698 ITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGDWLRKKRIVTGNPRCQKPYFLKEIP 757
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCA 302
I D+ +F C D + NSC P+ + CP C C
Sbjct: 758 IQDVAIQDFTCD-----------------DGNDDNSCSPLSR----------CPAECTCL 790
Query: 303 DGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQN 362
D +V C KGL +P +P+ TEL +D +L+ +S N+K T L N
Sbjct: 791 DTVVRCSNKGLKALPKGIPKDVTELY----LDGNQFILVPKELS-NYKHLT--LIDLSNN 843
Query: 363 DITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I+ L ++F+N +L + L N + +P + F K LR +
Sbjct: 844 RISTLSNQSFSNMTQLLTLILSYNRLRCIPSRTFDGLKSLRLL 886
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 692 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGDWLRKKRIVTGNPRCQKPY 751
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 752 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPAECTCLDTVVRCSNKGLKALPKGIP 809
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
+ TEL L+ N L PK +NYK L IDLS N+IS ++ +F
Sbjct: 810 KDVTELYLDGNQFI-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 868
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 869 LRCIPSRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSSLSHLAIGANPLHCDCNMQWLSD 928
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 929 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 965
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 43/81 (53%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
E L N+IT + FA + LR + L +N+IS + AFQ LK L L LN NNL
Sbjct: 111 EADLNGNNITRITKTDFAGLRHLRVLQLMENRISTIERGAFQDLKELERLRLNKNNLQLF 170
Query: 188 PDGVFAELFRLRTLRISENSF 208
P+ +F +L L +SEN
Sbjct: 171 PELLFLGTSKLYRLDLSENQI 191
Score = 38.1 bits (87), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 148 KRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENS 207
K + DL+ N I+++ F GL+ L L L N ++ + G F +L L LR+++N+
Sbjct: 107 KNPKEADLNGNNITRITKTDFAGLRHLRVLQLMENRISTIERGAFQDLKELERLRLNKNN 166
Query: 208 F 208
Sbjct: 167 L 167
>gi|114593309|ref|XP_001163449.1| PREDICTED: slit homolog 2 protein isoform 7 [Pan troglodytes]
gi|410257106|gb|JAA16520.1| slit homolog 2 [Pan troglodytes]
gi|410304000|gb|JAA30600.1| slit homolog 2 [Pan troglodytes]
Length = 1529
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 144/451 (31%), Positives = 214/451 (47%), Gaps = 69/451 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + EF CSG C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 241 HLRGHNVAEVQKREFVCSGHQSFMAPSCSV-LHCPAACTCSNNIVDCRGKGLTEIPTNLP 299
Query: 124 EATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I+EL P AF + L + L N+
Sbjct: 300 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 359
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+++ VDAFQ L +L L+L +N L + G F+ L
Sbjct: 360 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 419
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 420 RAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 479
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
F P K +G+C A+ +CP C C VDC + LNK
Sbjct: 480 AKEQY-------------FIPGTEDYRSKLSGDCFADLACPEKCHCEGTTVDCSNQKLNK 526
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P +P+ T EL ++ + +L + + FK+ R N IT++ AF
Sbjct: 527 IPEHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGAFEG 580
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ I L N + + K F + L+ +
Sbjct: 581 ASGVNEILLTSNRLENVQHKMFKGLESLKTL 611
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 139/277 (50%), Gaps = 55/277 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 132 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 191
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++
Sbjct: 192 VASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQ 251
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CSG CS H CP C C++ IVDC
Sbjct: 252 KREFVCSG-----HQSFMAPSCSV-LH-------------------CPAACTCSNNIVDC 286
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 287 RGKGLTEIPTNLPETITEI------------------------------RLEQNTIKVIP 316
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 317 PGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 353
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 130/463 (28%), Positives = 201/463 (43%), Gaps = 95/463 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 402 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 461
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K +G+C A+ +CP C C VDC
Sbjct: 462 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCHCEGTTVDCSN 521
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG- 170
+ LNK+P +P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 522 QKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGA 581
Query: 171 -----------------------LKSLTS------------------------LTLNNNN 183
L+SL + L+L +N
Sbjct: 582 SGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQ 641
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N F C+C+L+WL WL++ + +C P +K
Sbjct: 642 ITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIP 701
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCA 302
I D+ +F C D + NSC P+ + CP C C
Sbjct: 702 IQDVAIQDFTCD-----------------DGNDDNSCSPLSR----------CPTECTCL 734
Query: 303 DGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQN 362
D +V C KGL +P +P TEL +D L+ +S N+K T L N
Sbjct: 735 DTVVRCSNKGLKVLPKGIPRDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNN 787
Query: 363 DITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I+ L ++F+N +L + L N + +PP+ F K LR +
Sbjct: 788 RISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 830
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 636 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 695
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 696 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPTECTCLDTVVRCSNKGLKVLPKGIP 753
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 754 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 812
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 813 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 872
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 873 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 909
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQ LK L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRLDLSENQI 139
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF + K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRL 132
>gi|281348510|gb|EFB24094.1| hypothetical protein PANDA_005198 [Ailuropoda melanoleuca]
Length = 1324
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 140/432 (32%), Positives = 210/432 (48%), Gaps = 78/432 (18%)
Query: 28 RISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGPVEKP 87
R+ N CDCHL+WL +WL++ P +GL+T+C P+ ++G N+ ++ + EF CSG E
Sbjct: 1 RLHSNRLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLNVAEVQKSEFSCSGQGEAG 60
Query: 88 -TGECA-AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFA 145
C + SCP C C++GIVDCR KGL +P LPE TE+RLE N I +PP AF+
Sbjct: 61 RVPSCTLSSGSCPAMCTCSNGIVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFS 120
Query: 146 NYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFA------------ 193
Y++LRRIDLS NQI+++A DAFQGL+SL SL L N +T LP GVF
Sbjct: 121 PYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNA 180
Query: 194 ------------------------------------ELFRLRTLRISENSFICDCHLSWL 217
L ++TL +++N FICDC+L WL
Sbjct: 181 NKINCVRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWL 240
Query: 218 HRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPY 277
+L+ P +C +P + + I I +F+CS + + + T+ +
Sbjct: 241 ADFLRTNPIETSGARCASPRRLANKRIGQIKSKKFRCS-----AKEQYFIP--GTEDYQL 293
Query: 278 NSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL---TYMVSID 334
NS EC+++ CPH CRC + +C L K+P +P++T EL +SI
Sbjct: 294 NS--------ECSSDAVCPHKCRCEASLAECSSLKLTKIPERIPQSTAELRLNNNEISIL 345
Query: 335 RVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPP 393
+ FK+ T+ + L N ++E+ AF + + L N + +
Sbjct: 346 EATGI---------FKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRS 396
Query: 394 KAFANYKRLRRM 405
F LR +
Sbjct: 397 GMFRGLDGLRTL 408
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 189/451 (41%), Gaps = 91/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 201 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPR 260
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + EC+++ CPH CRC + +C
Sbjct: 261 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECSSDAVCPHKCRCEASLAECSSLK 320
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L K+P +P++T ELRL N+I+ L F L++I+LS N++S++ AF+G
Sbjct: 321 LTKIPERIPQSTAELRLNNNEISILEATGIFKKLTHLKKINLSNNKVSEIEDGAFEGAAS 380
Query: 171 ---------------------LKSLTSLTLNNNNLTYLPD-------------------- 189
L L +L L NN ++ + +
Sbjct: 381 VSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIA 440
Query: 190 ----GVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
G F L L TL + N F C+C L+WL WL+R + +C P ++ +
Sbjct: 441 TISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRRRKIVTGNPRCQNPDFLRQIPLQ 500
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E G C P CP C C D +
Sbjct: 501 DVAFPDFRCEEGQEE--------------------------GGCLPRPQCPQECACLDTV 534
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L +P +P+ TEL +D L+ +S FK + L N I+
Sbjct: 535 VRCSNKHLQVLPKGIPKNVTELY----LDGNQFTLVPGQLS-TFKYL--QLVDLSNNKIS 587
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L +F N +L + L N + +PP AF
Sbjct: 588 SLSNSSFTNMSQLTTLILSYNALQCIPPLAF 618
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 131/277 (47%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + + G F L L TL + N F C+C L+WL WL+R + +C P
Sbjct: 433 SLYDNQIATISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRRRKIVTGNPRCQNPD 492
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ G C P CP C C D +V C K L +P +P
Sbjct: 493 FLRQIPLQDVAFPDFRCEEGQEE--GGCLPRPQCPQECACLDTVVRCSNKHLQVLPKGIP 550
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TEL L+ N T L P + +K L+ +DLS N+IS ++ +F + LT+L L+ N
Sbjct: 551 KNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 609
Query: 184 LTYLP------------------------DGVFAELFRLRTLRISENSFICDCHLSWLHR 219
L +P +G+F + L L I N CDCHL WL
Sbjct: 610 LQCIPPLAFQGLRSLRLLSLHGNDISSLREGIFTDATSLSHLAIGANPLYCDCHLRWLSG 669
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 670 WVKTGYKEPGIARCAGPPDMEGKLLLTTPAKKFECQG 706
>gi|431897193|gb|ELK06455.1| Slit like protein 2 protein [Pteropus alecto]
Length = 1399
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 144/451 (31%), Positives = 214/451 (47%), Gaps = 69/451 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 50 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 109
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + EF CSG C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 110 HLRGHNVAEVQKREFVCSGHQSFMAPSCSVL-HCPAACTCSNNIVDCRGKGLTEIPTNLP 168
Query: 124 EATTELRLEQNDI------------------------TELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I +EL P AF + L + L N+
Sbjct: 169 ETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 228
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+++ VDAFQ L +L L+L +N L + G F+ L
Sbjct: 229 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 288
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 289 RAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 348
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
F P K +G+C A+ +CP CRC VDC + L K
Sbjct: 349 AKEQY-------------FIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLTK 395
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P +P+ T EL ++ + +L + + FK+ R N IT++ AF
Sbjct: 396 IPDHVPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGAFEG 449
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ I L N + + K F + L+ +
Sbjct: 450 ASGVNEILLTSNRLENVQHKMFKGLESLKTL 480
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 126/251 (50%), Gaps = 55/251 (21%)
Query: 155 LSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHL 214
L NQIS + AF+ L+ L LTLNNNN+T L F + +LRT R+ N+ CDCHL
Sbjct: 27 LDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHL 86
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDF 274
+WL WL++ PR+GLYT+C PSH++G N+ ++ + EF CSG CS
Sbjct: 87 AWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQKREFVCSG-----HQSFMAPSCSV-L 140
Query: 275 HPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSID 334
H CP C C++ IVDCR KGL ++P LPE TE+
Sbjct: 141 H-------------------CPAACTCSNNIVDCRGKGLTEIPTNLPETITEI------- 174
Query: 335 RVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPK 394
RLEQN I +PP AF+ YK+LRRI L N I+EL P
Sbjct: 175 -----------------------RLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPD 211
Query: 395 AFANYKRLRRM 405
AF + L +
Sbjct: 212 AFQGLRSLNSL 222
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 130/463 (28%), Positives = 201/463 (43%), Gaps = 95/463 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 271 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 330
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K +G+C A+ +CP CRC VDC
Sbjct: 331 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSN 390
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG- 170
+ L K+P +P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 391 QKLTKIPDHVPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGA 450
Query: 171 -----------------------LKSLTS------------------------LTLNNNN 183
L+SL + L+L +N
Sbjct: 451 SGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQ 510
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N F C+C+L+WL WL++ + +C P +K
Sbjct: 511 ITTIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIP 570
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCA 302
I D+ +F C D + NSC P+ + CP C C
Sbjct: 571 IQDVAIQDFTCD-----------------DGNDDNSCSPLSR----------CPTECTCL 603
Query: 303 DGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQN 362
D +V C KGL +P +P TEL +D L+ +S N+K T L N
Sbjct: 604 DTVVRCSNKGLKVLPKGIPRDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNN 656
Query: 363 DITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I+ L ++F+N +L + L N + +PP+ F K LR +
Sbjct: 657 RISTLSNQSFSNMTQLLTLILSYNRLRCIPPQTFDGLKSLRLL 699
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 505 SLYDNQITTIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 564
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 565 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPTECTCLDTVVRCSNKGLKVLPKGIP 622
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 623 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 681
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 682 LRCIPPQTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 741
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 742 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 778
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L+ N+++ +P+G F +L L L I N CDC++ WL W+K + +C P
Sbjct: 700 SLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPG 759
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ + +L P +F C GPV+
Sbjct: 760 EMADKLLLTTPSKKFTCQGPVD 781
>gi|388596651|ref|NP_001254004.1| slit homolog 2 protein precursor [Gallus gallus]
Length = 1528
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 146/451 (32%), Positives = 213/451 (47%), Gaps = 69/451 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C P+
Sbjct: 180 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPA 239
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + EF CSG C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 240 HLRGHNVAEVQKREFVCSGHQSFMAPSCSV-LHCPAACTCSNNIVDCRGKGLTEIPTNLP 298
Query: 124 EATTELRLEQNDI------------------------TELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I +E P AF + L + L N+
Sbjct: 299 ETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGNK 358
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+++ VDAFQ L +L L+L +N L + G F+ L
Sbjct: 359 ITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 418
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 419 RAIQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 478
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
F P K +G+C A+ +CP CRC VDC + LNK
Sbjct: 479 AKEQY-------------FIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNK 525
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P +P+ T EL + VL + I FK+ R L N IT++ AF
Sbjct: 526 IPDHIPQYTAELRLN---NNEFSVLEATGI---FKKLPQLRKINLSNNKITDIEEGAFDG 579
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L N + + K F + L+ +
Sbjct: 580 ASGVNELLLTSNRLETVRDKMFKGLESLKTL 610
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/277 (36%), Positives = 138/277 (49%), Gaps = 55/277 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 131 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 190
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C P+H++G N+ ++
Sbjct: 191 VASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPAHLRGHNVAEVQ 250
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CSG CS H CP C C++ IVDC
Sbjct: 251 KREFVCSG-----HQSFMAPSCSV-LH-------------------CPAACTCSNNIVDC 285
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 286 RGKGLTEIPTNLPETITEI------------------------------RLEQNSIKVIP 315
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRRI L N I+E P AF + L +
Sbjct: 316 PGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSL 352
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 132/463 (28%), Positives = 203/463 (43%), Gaps = 95/463 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++TL +++N FICDCHL WL +L P +C +P
Sbjct: 401 SLYDNKLQTIAKGTFSPLRAIQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 460
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K +G+C A+ +CP CRC VDC
Sbjct: 461 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSN 520
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAF--- 168
+ LNK+P +P+ T ELRL N+ + L F +LR+I+LS N+I+ + AF
Sbjct: 521 QKLNKIPDHIPQYTAELRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGA 580
Query: 169 ---------------------QGLKSLTS------------------------LTLNNNN 183
+GL+SL + L+L +N
Sbjct: 581 SGVNELLLTSNRLETVRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQ 640
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N F C+CHL+WL WL++ + +C P +K
Sbjct: 641 ITTVAPGSFDTLHSLSTLNLLANPFNCNCHLAWLGDWLRKKRIVTGNPRCQKPYFLKEIP 700
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCA 302
I D+ +F C D + NSC P+ + CP C C
Sbjct: 701 IQDVAIQDFTCD-----------------DGNDDNSCSPLSR----------CPAECTCL 733
Query: 303 DGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQN 362
D +V C KGL +P +P+ TEL +D L+ +S N+K T L N
Sbjct: 734 DTVVRCSNKGLKALPKGIPKDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNN 786
Query: 363 DITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I+ L ++F+N +L + L N + +P + F K LR +
Sbjct: 787 RISTLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLL 829
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 134/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+CHL+WL WL++ + +C P
Sbjct: 635 SLYDNQITTVAPGSFDTLHSLSTLNLLANPFNCNCHLAWLGDWLRKKRIVTGNPRCQKPY 694
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 695 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPAECTCLDTVVRCSNKGLKALPKGIP 752
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
+ TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 753 KDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 811
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 812 LRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 871
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 872 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 908
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 46/116 (39%), Gaps = 30/116 (25%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNF 349
AA CP C C+ VDC L VP +P T +R+D
Sbjct: 22 AAPQPCPAQCSCSGSTVDCHGLALRGVPRNIPRNT---------ERLD------------ 60
Query: 350 KRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N+IT + FA + LR ++L +N I+ + AF + K L R+
Sbjct: 61 ---------LNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERL 107
>gi|301761968|ref|XP_002916406.1| PREDICTED: slit homolog 2 protein-like [Ailuropoda melanoleuca]
Length = 1530
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 144/451 (31%), Positives = 214/451 (47%), Gaps = 69/451 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + EF CSG C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 241 HLRGHNVAEVQKREFVCSGHQSFMAPSCSV-LHCPAACTCSNNIVDCRGKGLPEIPTNLP 299
Query: 124 EATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I+EL P AF + L + L N+
Sbjct: 300 ETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 359
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+++ VDAFQ L +L L+L +N L + G F+ L
Sbjct: 360 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 419
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 420 RAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 479
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
F P K +G+C A+ +CP CRC VDC + L K
Sbjct: 480 AKEQY-------------FIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLTK 526
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P +P+ T EL ++ + +L + + FK+ R N IT++ AF
Sbjct: 527 IPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGAFEG 580
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ I L N + + K F + L+ +
Sbjct: 581 ASGVNEILLTSNRLENVQHKMFKGLESLKTL 611
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 146/294 (49%), Gaps = 58/294 (19%)
Query: 115 LNKVPILLPEATTEL---RLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L P LL T++L L +N I +P KAF ++ + L NQIS + AF+ L
Sbjct: 115 LQLFPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRAL 174
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT
Sbjct: 175 RDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYT 234
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C PSH++G N+ ++ + EF CSG CS H
Sbjct: 235 QCMGPSHLRGHNVAEVQKREFVCSG-----HQSFMAPSCSV-LH---------------- 272
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
CP C C++ IVDCR KGL ++P LPE TE+
Sbjct: 273 ---CPAACTCSNNIVDCRGKGLPEIPTNLPETITEI------------------------ 305
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +PP AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 306 ------RLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 353
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 128/479 (26%), Positives = 200/479 (41%), Gaps = 103/479 (21%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 402 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 461
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K +G+C A+ +CP CRC VDC
Sbjct: 462 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSN 521
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG- 170
+ L K+P +P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 522 QKLTKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGA 581
Query: 171 -----------------------LKSLTS------------------------LTLNNNN 183
L+SL + L+L +N
Sbjct: 582 SGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQ 641
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N F C+C+L+WL WL++ + +C P +K
Sbjct: 642 ITTIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIP 701
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
I D+ +F C + ++ C+ CP C C D
Sbjct: 702 IQDVAIQDFTCDDGNDDS--------------------------SCSPLSRCPAECTCLD 735
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSY-------ISNN-FKRWTNR 355
+V C K L +P +P TEL + + LY+Y +SNN +N+
Sbjct: 736 TVVRCSNKALKVLPKGIPRDVTELYLDGNQFTLVPKELYNYKHLTLIDLSNNRISTLSNQ 795
Query: 356 SRR---------LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
S L N + +PP+ F K LR + L NDI+ +P AF + L +
Sbjct: 796 SFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHL 854
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 131/277 (47%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 636 SLYDNQITTIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 695
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C K L +P +P
Sbjct: 696 FLKEIPIQDVAIQDFTCDDGNDDSS--CSPLSRCPAECTCLDTVVRCSNKALKVLPKGIP 753
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK NYK L IDLS N+IS ++ +F
Sbjct: 754 RDVTELYLDGNQFT-LVPKELYNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 812
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 813 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 872
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 873 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 909
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQ LK L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKISAIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRLDLSENQI 139
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L+ N+++ +P+G F +L L L I N CDC++ WL W+K + +C P
Sbjct: 831 SLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPG 890
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ + +L P +F C GPV+
Sbjct: 891 EMADKLLLTTPSKKFTCQGPVD 912
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF + K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKISAIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRL 132
>gi|426231499|ref|XP_004009776.1| PREDICTED: slit homolog 2 protein isoform 5 [Ovis aries]
Length = 1543
Score = 231 bits (588), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 145/454 (31%), Positives = 214/454 (47%), Gaps = 71/454 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPS---CPHPCRCADGIVDCREKGLNKVPI 120
H++G N+ ++ + EF CS E A S CP C C++ IVDCR KGL ++P
Sbjct: 241 HLRGHNVAEVQKREFVCSDEEEGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPT 300
Query: 121 LLPEATTELRLEQNDI------------------------TELPPKAFANYKRLRRIDLS 156
LPE TE+RLEQN I +EL P AF + L + L
Sbjct: 301 NLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLY 360
Query: 157 KNQISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
N+I+++ VDAFQ L +L L+L +N L + G F
Sbjct: 361 GNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTF 420
Query: 193 AELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
+ L ++T+ +++N FICDCHL WL +L P +C +P + + I I +F
Sbjct: 421 SPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKF 480
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CS F P K +G+C A+ +CP CRC VDC +
Sbjct: 481 RCSAKEQY-------------FIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQK 527
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKA 371
L K+P +P+ T EL ++ + +L + + FK+ R N IT++ A
Sbjct: 528 LTKIPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGA 581
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + I L N + + K F + L+ +
Sbjct: 582 FEGASGVNEILLTSNRLENVQHKMFKGLESLKTL 615
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 146/294 (49%), Gaps = 54/294 (18%)
Query: 115 LNKVPILLPEATTEL---RLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L P LL T++L L +N I +P KAF ++ + L NQIS + AF+ L
Sbjct: 115 LQLFPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRAL 174
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT
Sbjct: 175 RDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYT 234
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C PSH++G N+ ++ + EF CS E CS H
Sbjct: 235 QCMGPSHLRGHNVAEVQKREFVCSDEE-EGHQSFMAPSCSV-LH---------------- 276
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
CP C C++ IVDCR KGL ++P LPE TE+
Sbjct: 277 ---CPAACTCSNNIVDCRGKGLTEIPTNLPETITEI------------------------ 309
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +PP AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 310 ------RLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 357
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/463 (27%), Positives = 200/463 (43%), Gaps = 95/463 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 406 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 465
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K +G+C A+ +CP CRC VDC
Sbjct: 466 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSN 525
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG- 170
+ L K+P +P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 526 QKLTKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGA 585
Query: 171 -----------------------LKSLTS------------------------LTLNNNN 183
L+SL + L+L +N
Sbjct: 586 SGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQ 645
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N F C+C+L+WL WL++ + +C P +K
Sbjct: 646 ITTIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIP 705
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCA 302
I D+ +F C D + NSC P+ + CP C C
Sbjct: 706 IQDVAIQDFTCD-----------------DGNDDNSCSPLSR----------CPAECTCL 738
Query: 303 DGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQN 362
D +V C K L +P +P TEL +D L+ +S N+K T L N
Sbjct: 739 DTVVRCSNKALKVLPKGIPRDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNN 791
Query: 363 DITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I+ L ++F+N +L + L N + +PP+ F K LR +
Sbjct: 792 RISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 834
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 132/277 (47%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 640 SLYDNQITTIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 699
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C K L +P +P
Sbjct: 700 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPAECTCLDTVVRCSNKALKVLPKGIP 757
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 758 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 816
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 817 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLAALSHLAIGANPLYCDCNMQWLSD 876
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 877 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 913
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+I+ + AFQ LK L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRLDLSENQI 139
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N IT + AF + K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRL 132
>gi|426231491|ref|XP_004009772.1| PREDICTED: slit homolog 2 protein isoform 1 [Ovis aries]
Length = 1534
Score = 231 bits (588), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 145/454 (31%), Positives = 214/454 (47%), Gaps = 71/454 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPS---CPHPCRCADGIVDCREKGLNKVPI 120
H++G N+ ++ + EF CS E A S CP C C++ IVDCR KGL ++P
Sbjct: 241 HLRGHNVAEVQKREFVCSDEEEGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPT 300
Query: 121 LLPEATTELRLEQNDI------------------------TELPPKAFANYKRLRRIDLS 156
LPE TE+RLEQN I +EL P AF + L + L
Sbjct: 301 NLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLY 360
Query: 157 KNQISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
N+I+++ VDAFQ L +L L+L +N L + G F
Sbjct: 361 GNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTF 420
Query: 193 AELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
+ L ++T+ +++N FICDCHL WL +L P +C +P + + I I +F
Sbjct: 421 SPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKF 480
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CS F P K +G+C A+ +CP CRC VDC +
Sbjct: 481 RCSAKEQY-------------FIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQK 527
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKA 371
L K+P +P+ T EL ++ + +L + + FK+ R N IT++ A
Sbjct: 528 LTKIPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGA 581
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + I L N + + K F + L+ +
Sbjct: 582 FEGASGVNEILLTSNRLENVQHKMFKGLESLKTL 615
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 146/294 (49%), Gaps = 54/294 (18%)
Query: 115 LNKVPILLPEATTEL---RLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L P LL T++L L +N I +P KAF ++ + L NQIS + AF+ L
Sbjct: 115 LQLFPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRAL 174
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT
Sbjct: 175 RDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYT 234
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C PSH++G N+ ++ + EF CS E CS H
Sbjct: 235 QCMGPSHLRGHNVAEVQKREFVCSDEE-EGHQSFMAPSCSV-LH---------------- 276
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
CP C C++ IVDCR KGL ++P LPE TE+
Sbjct: 277 ---CPAACTCSNNIVDCRGKGLTEIPTNLPETITEI------------------------ 309
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +PP AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 310 ------RLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 357
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 199/462 (43%), Gaps = 93/462 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 406 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 465
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K +G+C A+ +CP CRC VDC
Sbjct: 466 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSN 525
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG- 170
+ L K+P +P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 526 QKLTKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGA 585
Query: 171 -----------------------LKSLTS------------------------LTLNNNN 183
L+SL + L+L +N
Sbjct: 586 SGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQ 645
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N F C+C+L+WL WL++ + +C P +K
Sbjct: 646 ITTIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIP 705
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
I D+ +F C D + NSC P C AE C C D
Sbjct: 706 IQDVAIQDFTCD-----------------DGNDDNSC---SPLSRCPAE------CTCLD 739
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQND 363
+V C K L +P +P TEL +D L+ +S N+K T L N
Sbjct: 740 TVVRCSNKALKVLPKGIPRDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNNR 792
Query: 364 ITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I+ L ++F+N +L + L N + +PP+ F K LR +
Sbjct: 793 ISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 834
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 132/277 (47%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 640 SLYDNQITTIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 699
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C K L +P +P
Sbjct: 700 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPAECTCLDTVVRCSNKALKVLPKGIP 757
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 758 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 816
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 817 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLAALSHLAIGANPLYCDCNMQWLSD 876
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 877 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 913
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+I+ + AFQ LK L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRLDLSENQI 139
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N IT + AF + K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRL 132
>gi|344279288|ref|XP_003411421.1| PREDICTED: slit homolog 2 protein [Loxodonta africana]
Length = 1530
Score = 231 bits (588), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 143/451 (31%), Positives = 213/451 (47%), Gaps = 69/451 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + EF CSG C+ CP C C++ IVDCR K L ++P LP
Sbjct: 241 HLRGHNVAEVQKREFVCSGHQSFMAPSCSV-LHCPTTCTCSNNIVDCRGKSLTEIPTNLP 299
Query: 124 EATTELRLEQNDI------------------------TELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I +EL P AF + L + L N+
Sbjct: 300 ETITEIRLEQNSIKVIPAGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 359
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+++ VDAFQ L +L L+L +N L + G F+ L
Sbjct: 360 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 419
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++T+ +++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 420 RAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 479
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
F P K +G+C A+ +CP CRC VDC + LNK
Sbjct: 480 AKEQY-------------FIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNK 526
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P +P+ T EL ++ + +L + + FK+ R N IT++ F
Sbjct: 527 IPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGVFEG 580
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ I L N + + K F + L+ +
Sbjct: 581 ASGVNEILLTSNRLENVQHKMFKGLESLKTL 611
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/294 (36%), Positives = 144/294 (48%), Gaps = 58/294 (19%)
Query: 115 LNKVPILLPEATTEL---RLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L P LL T++L L +N I +P KAF ++ + L NQIS + AF+ L
Sbjct: 115 LQLFPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAIDIKNLQLDYNQISCIEDGAFRAL 174
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT
Sbjct: 175 RDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYT 234
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C PSH++G N+ ++ + EF CSG CS H
Sbjct: 235 QCMGPSHLRGHNVAEVQKREFVCSG-----HQSFMAPSCSV-LH---------------- 272
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
CP C C++ IVDCR K L ++P LPE TE+
Sbjct: 273 ---CPTTCTCSNNIVDCRGKSLTEIPTNLPETITEI------------------------ 305
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 306 ------RLEQNSIKVIPAGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 353
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 130/463 (28%), Positives = 201/463 (43%), Gaps = 95/463 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 402 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 461
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K +G+C A+ +CP CRC VDC
Sbjct: 462 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSN 521
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG- 170
+ LNK+P +P+ T ELRL N+ T L F +LR+I+ S N+I+ + F+G
Sbjct: 522 QKLNKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGVFEGA 581
Query: 171 -----------------------LKSLTS------------------------LTLNNNN 183
L+SL + L+L +N
Sbjct: 582 SGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQ 641
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N F C+C+L+WL WL++ + +C P +K
Sbjct: 642 ITTIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIP 701
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCA 302
I D+ +F C D + NSC P+ + CP C C
Sbjct: 702 IQDVAIQDFTCD-----------------DGNDDNSCSPLSR----------CPTECTCL 734
Query: 303 DGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQN 362
D +V C KGL +P +P TEL +D L+ +S N+K T L N
Sbjct: 735 DTVVRCSNKGLKALPKGIPRDVTELY----LDGNQFTLIPKELS-NYKHLT--LIDLSNN 787
Query: 363 DITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I+ L ++F+N +L + L N + +PP+ F K LR +
Sbjct: 788 RISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 830
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 636 SLYDNQITTIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 695
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 696 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPTECTCLDTVVRCSNKGLKALPKGIP 753
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 754 RDVTELYLDGNQFT-LIPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 812
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 813 LRCIPPRTFDGLKSLRLLSLHGNDISAVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 872
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 873 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 909
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQ LK L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRLDLSENQI 139
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF + K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRL 132
>gi|371940997|ref|NP_001178445.2| slit homolog 2 protein precursor [Bos taurus]
Length = 1534
Score = 231 bits (588), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 145/454 (31%), Positives = 214/454 (47%), Gaps = 71/454 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPS---CPHPCRCADGIVDCREKGLNKVPI 120
H++G N+ ++ + EF CS E A S CP C C++ IVDCR KGL ++P
Sbjct: 241 HLRGHNVAEVQKREFVCSDEEEGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPT 300
Query: 121 LLPEATTELRLEQNDI------------------------TELPPKAFANYKRLRRIDLS 156
LPE TE+RLEQN I +EL P AF + L + L
Sbjct: 301 NLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLY 360
Query: 157 KNQISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
N+I+++ VDAFQ L +L L+L +N L + G F
Sbjct: 361 GNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTF 420
Query: 193 AELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
+ L ++T+ +++N FICDCHL WL +L P +C +P + + I I +F
Sbjct: 421 SPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKF 480
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CS F P K +G+C A+ +CP CRC VDC +
Sbjct: 481 RCSAKEQY-------------FIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQK 527
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKA 371
L K+P +P+ T EL ++ + +L + + FK+ R N IT++ A
Sbjct: 528 LTKIPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGA 581
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + I L N + + K F + L+ +
Sbjct: 582 FEGASGVNEILLTSNRLENVQHKMFKGLESLKTL 615
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 145/294 (49%), Gaps = 54/294 (18%)
Query: 115 LNKVPILLPEATTEL---RLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L P LL T++L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 115 LQLFPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNHISCIEDGAFRAL 174
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT
Sbjct: 175 RDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYT 234
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C PSH++G N+ ++ + EF CS E CS H
Sbjct: 235 QCMGPSHLRGHNVAEVQKREFVCSDEE-EGHQSFMAPSCSV-LH---------------- 276
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
CP C C++ IVDCR KGL ++P LPE TE+
Sbjct: 277 ---CPAACTCSNNIVDCRGKGLTEIPTNLPETITEI------------------------ 309
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +PP AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 310 ------RLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 357
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 199/462 (43%), Gaps = 93/462 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 406 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 465
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K +G+C A+ +CP CRC VDC
Sbjct: 466 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSN 525
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG- 170
+ L K+P +P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 526 QKLTKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGA 585
Query: 171 -----------------------LKSLTS------------------------LTLNNNN 183
L+SL + L+L +N
Sbjct: 586 SGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQ 645
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N F C+C+L+WL WL++ + +C P +K
Sbjct: 646 ITTIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIP 705
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
I D+ +F C D + NSC P C AE C C D
Sbjct: 706 IQDVAIQDFTCD-----------------DGNDDNSC---SPLSRCPAE------CTCLD 739
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQND 363
+V C K L +P +P TEL +D L+ +S N+K T L N
Sbjct: 740 TVVRCSNKALKVLPKGIPRDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNNR 792
Query: 364 ITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I+ L ++F+N +L + L N + +PP+ F K LR +
Sbjct: 793 ISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 834
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 132/277 (47%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 640 SLYDNQITTIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 699
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C K L +P +P
Sbjct: 700 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPAECTCLDTVVRCSNKALKVLPKGIP 757
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 758 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 816
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 817 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLAALSHLAIGANPLYCDCNMQWLSD 876
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 877 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 913
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+I+ + AFQ LK L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRLDLSENQI 139
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N IT + AF + K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRL 132
>gi|410038136|ref|XP_003950343.1| PREDICTED: slit homolog 2 protein [Pan troglodytes]
Length = 1533
Score = 230 bits (587), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 145/454 (31%), Positives = 214/454 (47%), Gaps = 71/454 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 181 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPS---CPHPCRCADGIVDCREKGLNKVPI 120
H++G N+ ++ + EF CS E A S CP C C++ IVDCR KGL ++P
Sbjct: 241 HLRGHNVAEVQKREFVCSDEEEGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPT 300
Query: 121 LLPEATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLS 156
LPE TE+RLEQN I+EL P AF + L + L
Sbjct: 301 NLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLY 360
Query: 157 KNQISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
N+I+++ VDAFQ L +L L+L +N L + G F
Sbjct: 361 GNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTF 420
Query: 193 AELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
+ L ++T+ +++N FICDCHL WL +L P +C +P + + I I +F
Sbjct: 421 SPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKF 480
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CS F P K +G+C A+ +CP C C VDC +
Sbjct: 481 RCSAKEQY-------------FIPGTEDYRSKLSGDCFADLACPEKCHCEGTTVDCSNQK 527
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKA 371
LNK+P +P+ T EL ++ + +L + + FK+ R N IT++ A
Sbjct: 528 LNKIPEHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGA 581
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + I L N + + K F + L+ +
Sbjct: 582 FEGASGVNEILLTSNRLENVQHKMFKGLESLKTL 615
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 139/277 (50%), Gaps = 51/277 (18%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 132 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 191
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++
Sbjct: 192 VASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQ 251
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CS E CS H CP C C++ IVDC
Sbjct: 252 KREFVCSDEE-EGHQSFMAPSCSV-LH-------------------CPAACTCSNNIVDC 290
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 291 RGKGLTEIPTNLPETITEI------------------------------RLEQNTIKVIP 320
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 321 PGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 357
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 130/463 (28%), Positives = 201/463 (43%), Gaps = 95/463 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 406 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 465
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K +G+C A+ +CP C C VDC
Sbjct: 466 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCHCEGTTVDCSN 525
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG- 170
+ LNK+P +P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 526 QKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGA 585
Query: 171 -----------------------LKSLTS------------------------LTLNNNN 183
L+SL + L+L +N
Sbjct: 586 SGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQ 645
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N F C+C+L+WL WL++ + +C P +K
Sbjct: 646 ITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIP 705
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCA 302
I D+ +F C D + NSC P+ + CP C C
Sbjct: 706 IQDVAIQDFTCD-----------------DGNDDNSCSPLSR----------CPTECTCL 738
Query: 303 DGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQN 362
D +V C KGL +P +P TEL +D L+ +S N+K T L N
Sbjct: 739 DTVVRCSNKGLKVLPKGIPRDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNN 791
Query: 363 DITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I+ L ++F+N +L + L N + +PP+ F K LR +
Sbjct: 792 RISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 834
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 640 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 699
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 700 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPTECTCLDTVVRCSNKGLKVLPKGIP 757
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 758 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 816
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 817 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 876
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 877 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 913
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 59/117 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC L VP +P T L L N+IT + FA + LR
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLR 82
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQ LK L L LN N+L P+ +F +L L +SEN
Sbjct: 83 VLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRLDLSENQI 139
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNN 348
A +CP C C+ VDC L VP +P T L +I R+ K +
Sbjct: 23 VAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKT--------D 74
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + R +L +N I+ + AF + K L R+RL +N + P F +L R+
Sbjct: 75 FAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRL 132
>gi|326919362|ref|XP_003205950.1| PREDICTED: LOW QUALITY PROTEIN: slit homolog 2 protein-like
[Meleagris gallopavo]
Length = 1474
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 146/452 (32%), Positives = 214/452 (47%), Gaps = 70/452 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C P+
Sbjct: 125 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPA 184
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + EF CSG C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 185 HLRGHNVAEVQKREFVCSGHQSFMAPSCSV-LHCPAACTCSNNIVDCRGKGLTEIPTNLP 243
Query: 124 EATTELRLEQNDI------------------------TELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I +E P AF + L + L N+
Sbjct: 244 ETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGNK 303
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+++ VDAFQ L +L L+L +N L + G F+ L
Sbjct: 304 ITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 363
Query: 196 FRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
++TL +++N FICDCHL WL +L + P +C +P + + I I +F+C
Sbjct: 364 RAIQTLHLAQNPFICDCHLKWLADYLHNQTPLTTSGARCTSPRRLANKRIGQIKSKKFRC 423
Query: 255 SGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLN 314
S F P K +G+C A+ +CP CRC VDC + LN
Sbjct: 424 SAKEQY-------------FIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLN 470
Query: 315 KVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFA 373
K+P +P+ T EL + VL + I FK+ R L N IT++ AF
Sbjct: 471 KIPDHIPQYTAELRLN---NNEFSVLEATGI---FKKLPQLRKINLSNNKITDIEEGAFD 524
Query: 374 NYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L N + + K F + L+ +
Sbjct: 525 GASGVNELLLTSNRLETVRDKMFKGLESLKTL 556
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/277 (36%), Positives = 138/277 (49%), Gaps = 55/277 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 76 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 135
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C P+H++G N+ ++
Sbjct: 136 VASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPAHLRGHNVAEVQ 195
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CSG CS H CP C C++ IVDC
Sbjct: 196 KREFVCSG-----HQSFMAPSCSV-LH-------------------CPAACTCSNNIVDC 230
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 231 RGKGLTEIPTNLPETITEI------------------------------RLEQNSIKVIP 260
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRRI L N I+E P AF + L +
Sbjct: 261 PGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSL 297
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 132/464 (28%), Positives = 204/464 (43%), Gaps = 96/464 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAP 62
+L +N L + G F+ L ++TL +++N FICDCHL WL +L + P +C +P
Sbjct: 346 SLYDNKLQTIAKGTFSPLRAIQTLHLAQNPFICDCHLKWLADYLHNQTPLTTSGARCTSP 405
Query: 63 SHIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCR 111
+ + I I +F+CS + K +G+C A+ +CP CRC VDC
Sbjct: 406 RRLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCS 465
Query: 112 EKGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAF-- 168
+ LNK+P +P+ T ELRL N+ + L F +LR+I+LS N+I+ + AF
Sbjct: 466 NQKLNKIPDHIPQYTAELRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDG 525
Query: 169 ----------------------QGLKSLTS------------------------LTLNNN 182
+GL+SL + L+L +N
Sbjct: 526 ASGVNELLLTSNRLETVRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDN 585
Query: 183 NLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQ 242
+T + G F L L TL + N F C+CHL+WL WL++ + +C P +K
Sbjct: 586 QITTVAPGSFDTLHSLSTLNLLANPFNCNCHLAWLGDWLRKKRIVTGNPRCQKPYFLKEI 645
Query: 243 NILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRC 301
I D+ +F C D + NSC P+ + CP C C
Sbjct: 646 PIQDVAIQDFTCD-----------------DGNDDNSCSPLSR----------CPAECTC 678
Query: 302 ADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQ 361
D +V C KGL +P +P+ TEL +D L+ +S N+K T L
Sbjct: 679 LDTVVRCSNKGLKALPKGIPKDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSN 731
Query: 362 NDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N I+ L ++F+N +L + L N + +P + F K LR +
Sbjct: 732 NRISTLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLL 775
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 134/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+CHL+WL WL++ + +C P
Sbjct: 581 SLYDNQITTVAPGSFDTLHSLSTLNLLANPFNCNCHLAWLGDWLRKKRIVTGNPRCQKPY 640
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 641 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPAECTCLDTVVRCSNKGLKALPKGIP 698
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
+ TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 699 KDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 757
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 758 LRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 817
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 818 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 854
>gi|301614560|ref|XP_002936761.1| PREDICTED: slit homolog 2 protein-like [Xenopus (Silurana)
tropicalis]
Length = 1507
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 143/451 (31%), Positives = 217/451 (48%), Gaps = 77/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C P
Sbjct: 190 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPI 249
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G NI ++ + EF C+G C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 250 HLRGHNIAEVQKREFVCTGQQSFMVHSCSV-LHCPAACTCSNNIVDCRGKGLTEIPTNLP 308
Query: 124 EATTELRLEQNDI------------------------TELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I +E+ AF + L + L N+
Sbjct: 309 ETITEMRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEIAADAFQGLRSLNSLVLYGNK 368
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+++ VD+FQ L +L L+L +N L + G FA L
Sbjct: 369 ITELPKGLFEGLVLLQLLLLNANKINCLRVDSFQDLHNLNLLSLYDNKLQTIAKGTFAPL 428
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 429 RAIQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 488
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
G+ + RSK+ +G+C A+ +CP CRC VDC + L K
Sbjct: 489 GTE-DYRSKL--------------------SGDCFADLACPEKCRCEGTTVDCSNQKLTK 527
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P +P+ T EL ++ + +L + + FK+ R L N IT++ AF
Sbjct: 528 IPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINLSNNKITDIEEGAFEG 581
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L N + + K F + L+ +
Sbjct: 582 ANGVNELLLTSNRMENVRHKMFKGLEGLKTL 612
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/277 (36%), Positives = 138/277 (49%), Gaps = 55/277 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 141 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 200
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C P H++G NI ++
Sbjct: 201 VASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPIHLRGHNIAEVQ 260
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF C+G + CS H CP C C++ IVDC
Sbjct: 261 KREFVCTG-----QQSFMVHSCSV-LH-------------------CPAACTCSNNIVDC 295
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 296 RGKGLTEIPTNLPETITEM------------------------------RLEQNSIKVIP 325
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRRI L N I+E+ AF + L +
Sbjct: 326 PGAFSPYKKLRRIDLSNNQISEIAADAFQGLRSLNSL 362
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 134/472 (28%), Positives = 201/472 (42%), Gaps = 97/472 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G FA L ++TL +++N FICDCHL WL +L P +C +P
Sbjct: 411 SLYDNKLQTIAKGTFAPLRAIQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 470
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K +G+C A+ +CP CRC VDC + L K+P
Sbjct: 471 RLANKRIGQIKSKKFRCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLTKIPD 530
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--------- 170
+P+ T ELRL N+ T L F +LR+I+LS N+I+ + AF+G
Sbjct: 531 HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGAFEGANGVNELLL 590
Query: 171 ---------------LKSLTS------------------------LTLNNNNLTYLPDGV 191
L+ L + L+L +N +T + G
Sbjct: 591 TSNRMENVRHKMFKGLEGLKTLMLRSNRISCVNNDSFTGLSSVRLLSLYDNQITTVAPGA 650
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L TL + N F C+CHL+WL WL++ + +C P +K I D+ +
Sbjct: 651 FDTLHSLSTLNLLANPFNCNCHLAWLGDWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQD 710
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C D + NSC P C AE C C D +V C K
Sbjct: 711 FTCD-----------------DGNEDNSC---SPLSRCPAE------CTCLDTVVRCSNK 744
Query: 312 GLNKVPILLPEATTELTYMVS---------IDRVDKVLLYSYISNNFKRWTNRSRR---- 358
GL +P +P+ TEL Y+ + + L +N +N S
Sbjct: 745 GLKSLPKGIPKEVTEL-YLDGNMFPLVPKELSNYKHLTLIDLSNNRISTLSNHSFSNMTQ 803
Query: 359 -----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P +AF K LR + L ND++ +P AF + L +
Sbjct: 804 LLTLILSYNRLRCIPLRAFDGLKSLRLLSLHGNDVSAIPEGAFNDLSSLSHL 855
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 136/277 (49%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+CHL+WL WL++ + +C P
Sbjct: 637 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCHLAWLGDWLRKKRIVTGNPRCQKPY 696
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C E + C+ CP C C D +V C KGL +P +P
Sbjct: 697 FLKEIPIQDVAIQDFTCDDGNEDNS--CSPLSRCPAECTCLDTVVRCSNKGLKSLPKGIP 754
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVA------------------- 164
+ TEL L+ N + L PK +NYK L IDLS N+IS ++
Sbjct: 755 KEVTELYLDGN-MFPLVPKELSNYKHLTLIDLSNNRISTLSNHSFSNMTQLLTLILSYNR 813
Query: 165 -----VDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
+ AF GLKSL L+L+ N+++ +P+G F +L L L I N CDC+L WL
Sbjct: 814 LRCIPLRAFDGLKSLRLLSLHGNDVSAIPEGAFNDLSSLSHLAIGANPLYCDCNLQWLSD 873
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C+G
Sbjct: 874 WVKSEYKEPGIARCSGPGEMADKLLLTTPSKKFTCNG 910
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 62/127 (48%), Gaps = 1/127 (0%)
Query: 82 GPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPP 141
G V E A +P CP C C VDC L VP +P T L L N+IT +
Sbjct: 23 GLVLVTLSEVAPQP-CPAQCSCTGTTVDCHGLTLRSVPRNIPRNTERLDLNANNITRISK 81
Query: 142 KAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTL 201
FA + LR + L +N+I+ + AFQ LK L L LN NNL P+ +F +L L
Sbjct: 82 TDFAGLRHLRILQLMENKITTIERGAFQDLKELERLRLNRNNLQVFPELLFLGTPKLYRL 141
Query: 202 RISENSF 208
+SEN
Sbjct: 142 DLSENQI 148
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L+ N+++ +P+G F +L L L I N CDC+L WL W+K + +C P
Sbjct: 832 SLHGNDVSAIPEGAFNDLSSLSHLAIGANPLYCDCNLQWLSDWVKSEYKEPGIARCSGPG 891
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ + +L P +F C+GPV+
Sbjct: 892 EMADKLLLTTPSKKFTCNGPVD 913
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 53/120 (44%), Gaps = 11/120 (9%)
Query: 288 ECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYIS 346
E A +P CP C C VDC L VP +P T L +I R+ K
Sbjct: 31 EVAPQP-CPAQCSCTGTTVDCHGLTLRSVPRNIPRNTERLDLNANNITRISKT------- 82
Query: 347 NNFKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+F + R +L +N IT + AF + K L R+RL +N++ P F +L R+
Sbjct: 83 -DFAGLRHLRILQLMENKITTIERGAFQDLKELERLRLNRNNLQVFPELLFLGTPKLYRL 141
>gi|410957872|ref|XP_003985548.1| PREDICTED: slit homolog 2 protein [Felis catus]
Length = 1503
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 145/454 (31%), Positives = 214/454 (47%), Gaps = 71/454 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 141 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 200
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPS---CPHPCRCADGIVDCREKGLNKVPI 120
H++G N+ ++ + EF CS E A S CP C C++ IVDCR KGL ++P
Sbjct: 201 HLRGHNVAEVQKREFVCSDEEEGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPT 260
Query: 121 LLPEATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLS 156
LPE TE+RLEQN I+EL P AF + L + L
Sbjct: 261 NLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLY 320
Query: 157 KNQISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
N+I+++ VDAFQ L +L L+L +N L + G F
Sbjct: 321 GNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTF 380
Query: 193 AELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
+ L ++T+ +++N FICDCHL WL +L P +C +P + + I I +F
Sbjct: 381 SPLRAIQTMHLAQNPFICDCHLKWLADYLHVNPIETSGARCTSPRRLANKRIGQIKSKKF 440
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CS F P K +G+C A+ +CP CRC VDC +
Sbjct: 441 RCSAKEQY-------------FIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQK 487
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKA 371
L K+P +P+ T EL ++ + +L + + FK+ R N IT++ A
Sbjct: 488 LTKIPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGA 541
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + I L N + + K F + L+ +
Sbjct: 542 FEGASGVNEILLTSNRLENVQHKMFRGLESLKTL 575
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 146/294 (49%), Gaps = 54/294 (18%)
Query: 115 LNKVPILLPEATTEL---RLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L P LL T++L L +N I +P KAF ++ + L NQIS + AF+ L
Sbjct: 75 LQLFPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRAL 134
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT
Sbjct: 135 RDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYT 194
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C PSH++G N+ ++ + EF CS E CS H
Sbjct: 195 QCMGPSHLRGHNVAEVQKREFVCSDEE-EGHQSFMAPSCSV-LH---------------- 236
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
CP C C++ IVDCR KGL ++P LPE TE+
Sbjct: 237 ---CPAACTCSNNIVDCRGKGLTEIPTNLPETITEI------------------------ 269
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +PP AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 270 ------RLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 317
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 132/480 (27%), Positives = 204/480 (42%), Gaps = 105/480 (21%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 366 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHVNPIETSGARCTSPR 425
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K +G+C A+ +CP CRC VDC
Sbjct: 426 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSN 485
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG- 170
+ L K+P +P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 486 QKLTKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGA 545
Query: 171 -----------------------LKSLTS------------------------LTLNNNN 183
L+SL + L+L +N
Sbjct: 546 SGVNEILLTSNRLENVQHKMFRGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQ 605
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N F C+C+L+WL WL++ + +C P +K
Sbjct: 606 ITTIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIP 665
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCA 302
I D+ +F C D + NSC P+ + CP C C
Sbjct: 666 IQDVAIQDFTCD-----------------DGNDDNSCSPLSR----------CPTECTCL 698
Query: 303 DGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSY-------ISNN-FKRWTN 354
D +V C KGL +P +P TEL + + L++Y +SNN +N
Sbjct: 699 DTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFTLVPKELFNYKHLTLIDLSNNRISTLSN 758
Query: 355 RSRR---------LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+S L N + +PP+ F K LR + L NDI+ +P AF + L +
Sbjct: 759 QSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHL 818
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 132/277 (47%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 600 SLYDNQITTIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 659
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 660 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPTECTCLDTVVRCSNKGLKVLPKGIP 717
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK NYK L IDLS N+IS ++ +F
Sbjct: 718 RDVTELYLDGNQFT-LVPKELFNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 776
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 777 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 836
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 837 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 873
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 106 GIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAV 165
G+V R++G E T++ L N+IT + FA + LR + L +N+IS +
Sbjct: 5 GVVTGRKRG--------AEIRTKMDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIER 56
Query: 166 DAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
AFQ LK L L LN N+L P+ +F +L L +SEN
Sbjct: 57 GAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRLDLSENQI 99
>gi|348529025|ref|XP_003452015.1| PREDICTED: slit homolog 1 protein-like [Oreochromis niloticus]
Length = 1535
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 142/453 (31%), Positives = 212/453 (46%), Gaps = 96/453 (21%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ +P F + +LRT R+ N+ CDCHL+WL +WL++ P +GL+T+C AP
Sbjct: 191 TLNNNNISSIPVSSFNHMPKLRTFRLHSNNLNCDCHLAWLAQWLRQRPTIGLFTQCTAPP 250
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGE--CAAEPSCPHPCRCADGIVDCREKGLNKVPIL 121
++G N+ ++ +HEF CSG E + + SCP C C++ IVDCR KGL +P
Sbjct: 251 ELRGLNVAEVQKHEFSCSGHQESSSPQPCSTGGGSCPAMCTCSNNIVDCRGKGLTAIPAN 310
Query: 122 LPEATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLSK 157
LPE+ E+RLEQN I+E+ P AF + L + L
Sbjct: 311 LPESMAEIRLEQNGIKSVPPGAFSPYKKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYG 370
Query: 158 NQISK------------------------VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFA 193
N+I+ V +AFQ L++L+ L+L +N + L G F
Sbjct: 371 NKITDLPKGVFDGLYALQLLLLNANKIHCVRANAFQDLQNLSLLSLYDNKIQTLAKGTFT 430
Query: 194 ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFK 253
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I +F+
Sbjct: 431 SLRAIQTLHLAQNPFICDCNLKWLADYLRTNPIETSGARCASPRRLANKRIGQIKSKKFR 490
Query: 254 CSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL 313
CS Y + D H N+ C ++P CP CRC +VDC L
Sbjct: 491 CSAKEQ------YVIPGTEDSHLNNA---------CNSDPVCPPKCRCESNVVDCSNLKL 535
Query: 314 NKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITEL-PPKAF 372
K+P +P +T+EL RL N+IT L AF
Sbjct: 536 TKIPEHIPASTSEL------------------------------RLNNNEITTLEATGAF 565
Query: 373 ANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N +L++I L N ITE+ AF + +
Sbjct: 566 KNLSQLKKINLSNNKITEIEDGAFEGASSVNEL 598
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/294 (36%), Positives = 151/294 (51%), Gaps = 55/294 (18%)
Query: 115 LNKVPILLPE---ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L ++P LL + + L L +N I +P KAF ++ + L KN IS + AF+ L
Sbjct: 125 LQQLPELLFQKNPGLSRLDLSENYIQSIPRKAFRGATDIKNLQLDKNHISCIEDGAFRAL 184
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ +P F + +LRT R+ N+ CDCHL+WL +WL++ P +GL+T
Sbjct: 185 RGLEVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNNLNCDCHLAWLAQWLRQRPTIGLFT 244
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C AP ++G N+ ++ +HEF CSG H +S P TG
Sbjct: 245 QCTAPPELRGLNVAEVQKHEFSCSG------------------HQESSSPQPCSTG---- 282
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++ IVDCR KGL +P LPE+ E+
Sbjct: 283 GGSCPAMCTCSNNIVDCRGKGLTAIPANLPESMAEI------------------------ 318
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +PP AF+ YK+LRRI L N I+E+ P AF + L +
Sbjct: 319 ------RLEQNGIKSVPPGAFSPYKKLRRIDLSNNQISEIAPDAFQGLRSLNSL 366
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 183/455 (40%), Gaps = 95/455 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 415 SLYDNKIQTLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADYLRTNPIETSGARCASPR 474
Query: 64 HIKGQNILDIPEHEFKCSGPVEK--PTGE-------CAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + P E C ++P CP CRC +VDC
Sbjct: 475 RLANKRIGQIKSKKFRCSAKEQYVIPGTEDSHLNNACNSDPVCPPKCRCESNVVDCSNLK 534
Query: 115 LNKVPILLPEATTELRL-------------------------EQNDITELPPKAFANYKR 149
L K+P +P +T+ELRL N ITE+ AF
Sbjct: 535 LTKIPEHIPASTSELRLNNNEITTLEATGAFKNLSQLKKINLSNNKITEIEDGAFEGASS 594
Query: 150 LRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN------------------------NNLT 185
+ + L+ NQ+ V F+GL+ L L L N N LT
Sbjct: 595 VNELHLTANQMDSVRSGMFRGLEGLRMLMLRNNKISCIHNDSFTGLHNVRLLSLYDNQLT 654
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + NSF CDC L+WL WL+ + +C P+ +K +
Sbjct: 655 TITPGAFDTLQTLSTLNLLANSFNCDCRLAWLGDWLRSRKIVTGNPRCQRPAFLKEIPLQ 714
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C ET C P CP C C + +
Sbjct: 715 DVALPDFRCEEGQEET--------------------------SCVPRPQCPSECTCLETV 748
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRV--DKVLLYSYISNNFKRWTNRSRRLEQND 363
V C K L+ +P +P TEL + V ++ + Y+ + L N
Sbjct: 749 VRCSNKHLHTLPKGIPRNVTELYLDGNQFSVVPKELSAFKYL---------QLVDLSNNK 799
Query: 364 ITELPPKAFANYKRLRRIRLEQNDITELPPKAFAN 398
I L +FAN +L + L N + +P AF+
Sbjct: 800 INSLTNSSFANMSQLTTLILSYNSLRCIPKMAFSG 834
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 137/277 (49%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N LT + G F L L TL + NSF CDC L+WL WL+ + +C P+
Sbjct: 647 SLYDNQLTTITPGAFDTLQTLSTLNLLANSFNCDCRLAWLGDWLRSRKIVTGNPRCQRPA 706
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K + D+ +F+C E+ + C P CP C C + +V C K L+ +P +P
Sbjct: 707 FLKEIPLQDVALPDFRCEEGQEETS--CVPRPQCPSECTCLETVVRCSNKHLHTLPKGIP 764
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
TEL L+ N + +P K + +K L+ +DLS N+I+ + +F + LT+L L+ N+
Sbjct: 765 RNVTELYLDGNQFSVVP-KELSAFKYLQLVDLSNNKINSLTNSSFANMSQLTTLILSYNS 823
Query: 184 L------------------------TYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
L + LPDG+F ++ L L I N CDCHL WL
Sbjct: 824 LRCIPKMAFSGLHSLRLLSLHGNEISELPDGIFNDVSSLSHLAIGANPLYCDCHLRWLSD 883
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+CSG
Sbjct: 884 WVKTGYKEPGIARCAGPQGMEGKLLLTTPAKKFECSG 920
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 57/111 (51%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
CP C C+ VDC GL +P +P T L L N++T + FA K LR + L
Sbjct: 37 GCPALCTCSGTTVDCHGLGLKTMPRNIPRNTERLELNGNNLTRITKSDFAGLKYLRVLQL 96
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
+NQI+ + AF +K L L LN N L LP+ +F + L L +SEN
Sbjct: 97 VENQITVIERGAFDDMKELERLRLNRNQLQQLPELLFQKNPGLSRLDLSEN 147
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
N ++ LPDG+F ++ L L I N CDCHL WL W+K + +C P ++
Sbjct: 845 GNEISELPDGIFNDVSSLSHLAIGANPLYCDCHLRWLSDWVKTGYKEPGIARCAGPQGME 904
Query: 67 GQNILDIPEHEFKCSGPVE 85
G+ +L P +F+CSG V+
Sbjct: 905 GKLLLTTPAKKFECSGDVD 923
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
CP C C+ VDC GL +P +P T L ++ + + ++ + + R
Sbjct: 37 GCPALCTCSGTTVDCHGLGLKTMPRNIPRNTERLE--LNGNNLTRITKSDFAGLKYLRVL 94
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+L +N IT + AF + K L R+RL +N + +LP F L R+
Sbjct: 95 ----QLVENQITVIERGAFDDMKELERLRLNRNQLQQLPELLFQKNPGLSRL 142
>gi|213623976|gb|AAI70476.1| Slit2-a protein [Xenopus laevis]
gi|213625380|gb|AAI70478.1| Slit2-a protein [Xenopus laevis]
Length = 1530
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 141/451 (31%), Positives = 217/451 (48%), Gaps = 77/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCH++WL WL++ PR+GLYT+C P
Sbjct: 190 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHIAWLSDWLRQRPRVGLYTQCMGPI 249
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + EF C+G C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 250 HLRGHNVAEVQKREFSCTGQQSFMVHSCSV-LHCPAACTCSNNIVDCRGKGLTEIPTNLP 308
Query: 124 EATTELRLEQNDI------------------------TELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I +E+ AF + L + L N+
Sbjct: 309 ETITEMRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEIAADAFQGLRSLNSLVLYGNK 368
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+++ VD+FQ L +L L+L +N L + G FA L
Sbjct: 369 ITELPKGLFEGLFSLQLLLLNANKINCLRVDSFQDLHNLNLLSLYDNKLQTIAKGTFAPL 428
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 429 RAIQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 488
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
G+ + RSK+ +G+C A+ +CP CRC VDC + L K
Sbjct: 489 GTE-DYRSKL--------------------SGDCFADLACPEKCRCEGTTVDCSNQKLTK 527
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P +P+ T EL ++ + +L + + FK+ R L N IT++ AF
Sbjct: 528 IPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINLSNNKITDIEEGAFEG 581
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L N + + K F + L+ +
Sbjct: 582 ANGVNELLLTSNRMENVRHKMFKGLEGLKTL 612
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 132/472 (27%), Positives = 202/472 (42%), Gaps = 97/472 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G FA L ++TL +++N FICDCHL WL +L P +C +P
Sbjct: 411 SLYDNKLQTIAKGTFAPLRAIQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 470
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K +G+C A+ +CP CRC VDC + L K+P
Sbjct: 471 RLANKRIGQIKSKKFRCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLTKIPD 530
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--------- 170
+P+ T ELRL N+ T L F +LR+I+LS N+I+ + AF+G
Sbjct: 531 HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGAFEGANGVNELLL 590
Query: 171 ---------------LKSLTS------------------------LTLNNNNLTYLPDGV 191
L+ L + L+L +N +T + G
Sbjct: 591 TSNRMENVRHKMFKGLEGLKTLMLRSNHISCVNNDSFTGLSSVRLLSLYDNQITTVAPGA 650
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L TL + N F C+CHL+WL WL++ + +C P +K I D+ +
Sbjct: 651 FDTLHSLSTLNLLANPFNCNCHLAWLGDWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQD 710
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCADGIVDCRE 310
F C D + NSC P+ + CP C C D +V C
Sbjct: 711 FTCD-----------------DGNEDNSCSPLSR----------CPAECTCLDTVVRCSN 743
Query: 311 KGLNKVPILLPEATTELTYMVSI--------DRVDKVLLYSYISNNFKRWTNRSRR---- 358
KGL +P +P+ TEL ++ + L +N +N S
Sbjct: 744 KGLKSLPKGIPKEVTELYLDGNVFPLVPKELSNYKHLTLIDLSNNQISTLSNHSFSNMTQ 803
Query: 359 -----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P +AF K LR + L ND++ +P AF++ L +
Sbjct: 804 LLTLILSYNRLRCIPLRAFDGLKSLRLLSLHGNDVSAIPEGAFSDLSALSHL 855
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 98/277 (35%), Positives = 137/277 (49%), Gaps = 55/277 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + F+ L+ L LTLNNNN+T L
Sbjct: 141 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGTFRALRDLEVLTLNNNNITRLS 200
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCH++WL WL++ PR+GLYT+C P H++G N+ ++
Sbjct: 201 VASFNHMPKLRTFRLHSNNLYCDCHIAWLSDWLRQRPRVGLYTQCMGPIHLRGHNVAEVQ 260
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF C+G + CS H CP C C++ IVDC
Sbjct: 261 KREFSCTG-----QQSFMVHSCSV-LH-------------------CPAACTCSNNIVDC 295
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 296 RGKGLTEIPTNLPETITEM------------------------------RLEQNSIKVIP 325
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRRI L N I+E+ AF + L +
Sbjct: 326 PGAFSPYKKLRRIDLSNNQISEIAADAFQGLRSLNSL 362
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 136/277 (49%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+CHL+WL WL++ + +C P
Sbjct: 637 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCHLAWLGDWLRKKRIVTGNPRCQKPY 696
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C E + C+ CP C C D +V C KGL +P +P
Sbjct: 697 FLKEIPIQDVAIQDFTCDDGNEDNS--CSPLSRCPAECTCLDTVVRCSNKGLKSLPKGIP 754
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVA------------------- 164
+ TEL L+ N + L PK +NYK L IDLS NQIS ++
Sbjct: 755 KEVTELYLDGN-VFPLVPKELSNYKHLTLIDLSNNQISTLSNHSFSNMTQLLTLILSYNR 813
Query: 165 -----VDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
+ AF GLKSL L+L+ N+++ +P+G F++L L L I N CDC + WL
Sbjct: 814 LRCIPLRAFDGLKSLRLLSLHGNDVSAIPEGAFSDLSALSHLAIGANPLYCDCKMQWLSD 873
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C+G
Sbjct: 874 WVKSEYKEPGIARCSGPGEMADKLLLTTPSKKFTCNG 910
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Query: 90 ECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKR 149
E A +P CP C C VDC L VP +P L L N+IT + FA +
Sbjct: 31 EVAPQP-CPSQCSCTGTTVDCHGLSLRSVPRNIPRNAERLDLNANNITRISKTDFAGLRH 89
Query: 150 LRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
LR + L +N+I+ + AFQ LK L L LN NNL P+ +F +L L +SEN
Sbjct: 90 LRILQLMENKITTIERGAFQDLKELERLRLNRNNLQVFPELLFLGTPKLYRLDLSENQI 148
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 52/120 (43%), Gaps = 11/120 (9%)
Query: 288 ECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYIS 346
E A +P CP C C VDC L VP +P L +I R+ K
Sbjct: 31 EVAPQP-CPSQCSCTGTTVDCHGLSLRSVPRNIPRNAERLDLNANNITRISKT------- 82
Query: 347 NNFKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+F + R +L +N IT + AF + K L R+RL +N++ P F +L R+
Sbjct: 83 -DFAGLRHLRILQLMENKITTIERGAFQDLKELERLRLNRNNLQVFPELLFLGTPKLYRL 141
>gi|47226149|emb|CAG08296.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1071
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 150/474 (31%), Positives = 219/474 (46%), Gaps = 99/474 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRTLR+ N+ CDCHLSWL WL+ L +T+C AP+
Sbjct: 28 TLNNNNITLIPLSSFNHMPKLRTLRLHSNNLHCDCHLSWLSDWLRARRGLAPFTQCMAPA 87
Query: 64 HIKGQNILDIPEHEFKC----------------------SGPVEKPTGECAAEPS-CPHP 100
H++G N+ D+ + +F C +GP C + + CP
Sbjct: 88 HMRGLNVPDVQKKDFVCNVKMVKTAQWPSKTVKRVMLLSAGPALTEPRTCVPQVAVCPPS 147
Query: 101 CRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQI 160
C C + IVDCR KGL ++P LPEA E+RLEQN I +P AF+ YK+L+RIDLSKNQI
Sbjct: 148 CSCNNNIVDCRRKGLTEIPGNLPEAIVEIRLEQNLIKSVPAGAFSTYKKLKRIDLSKNQI 207
Query: 161 SKVAVDAFQGLKSLT------------------------S-------------------- 176
S +A DAF GL+SLT
Sbjct: 208 SDIAADAFSGLRSLTSLVLYGNKITELPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQ 267
Query: 177 ----LTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTK 232
L+L +N L + G+FA L ++TL +++N F+CDCHL WL +L P +
Sbjct: 268 NLNLLSLYDNKLQSISKGLFAPLRSIKTLHLAQNPFMCDCHLKWLADYLFDNPIETSGAR 327
Query: 233 CFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAE 292
C P + + I + +F+C+G + RS++ GEC +
Sbjct: 328 CSHPRRLANKRISQVKGKKFRCTGQE-DYRSRL--------------------NGECFQD 366
Query: 293 PSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRW 352
CP CRC +VDC L +VP +PE TT+L D ++ + FK+
Sbjct: 367 LVCPEKCRCEGTVVDCSNLKLTRVPPHIPEHTTDLRLN------DNEIVVLEAAGIFKKL 420
Query: 353 TNRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N + L N + ++ AF + + L N +T L + F L+ +
Sbjct: 421 PNLKKINLSNNKLRDIREGAFDGASGVLELLLTGNKLTGLQGRMFRGLNGLKTL 474
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 122/245 (49%), Gaps = 37/245 (15%)
Query: 164 AVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKR 223
+ A + + ++ TLNNNN+T +P F + +LRTLR+ N+ CDCHLSWL WL+
Sbjct: 14 STKASRAVLAVRGSTLNNNNITLIPLSSFNHMPKLRTLRLHSNNLHCDCHLSWLSDWLRA 73
Query: 224 YPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETR---SKIYREECSTDFHPYNSC 280
L +T+C AP+H++G N+ D+ + +F C+ ++T SK + P
Sbjct: 74 RRGLAPFTQCMAPAHMRGLNVPDVQKKDFVCNVKMVKTAQWPSKTVKRVMLLSAGP---- 129
Query: 281 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL 340
+ +P CP C C + IVDCR KGL ++P LPEA E+
Sbjct: 130 ALTEPRTCVPQVAVCPPSCSCNNNIVDCRRKGLTEIPGNLPEAIVEI------------- 176
Query: 341 LYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYK 400
RLEQN I +P AF+ YK+L+RI L +N I+++ AF+ +
Sbjct: 177 -----------------RLEQNLIKSVPAGAFSTYKKLKRIDLSKNQISDIAADAFSGLR 219
Query: 401 RLRRM 405
L +
Sbjct: 220 SLTSL 224
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 119/253 (47%), Gaps = 10/253 (3%)
Query: 12 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 71
Y G+ + L T + N ++CDCHL+WL WLK+ + +C P+ +K I
Sbjct: 499 YHVKGLPVPVIALLTSNLLSNPYVCDCHLAWLGHWLKKTRVVSGNPRCQKPAFLKEIPIQ 558
Query: 72 DIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKG------LNKVPILLP-- 123
D+ +F C V + A PS C +G L VP L
Sbjct: 559 DVATPDFTCD--VRPHSRLLPAPPSQISHCLSLRSHTFTSSEGYLEGNMLTSVPKELAGM 616
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ + + L N I+ L P F+N +L + LS NQI + V AF GLK+L LTL+ N+
Sbjct: 617 KQLSLVDLSNNSISTLAPFTFSNMTQLATLILSYNQIRCIPVYAFDGLKALRLLTLHGND 676
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
L+ +P+G F L L L + N C+C + WL +W+K + +C P + +
Sbjct: 677 LSTIPEGAFNHLTSLSHLALGANPLYCNCEMRWLSQWVKAGFKEPGIARCTGPPEMADRL 736
Query: 244 ILDIPEHEFKCSG 256
+L P ++F+C G
Sbjct: 737 LLTTPLNKFQCKG 749
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 21/133 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TL+ N+L+ +P+G F L L L + N C+C + WL +W+K + +C P
Sbjct: 671 TLHGNDLSTIPEGAFNHLTSLSHLALGANPLYCNCEMRWLSQWVKAGFKEPGIARCTGPP 730
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------------KPTGECAAEPSCPHPCRCADGIV 108
+ + +L P ++F+C GP + + G C ++ + + C C G
Sbjct: 731 EMADRLLLTTPLNKFQCKGPTDLSLLSKCAPCLGAPCQNNGTCVSDATGSYLCMCPYGF- 789
Query: 109 DCREKGLN-KVPI 120
KG N ++PI
Sbjct: 790 ----KGQNCEIPI 798
>gi|148234893|ref|NP_001081137.1| slit homolog 2 precursor [Xenopus laevis]
gi|15636793|gb|AAL02123.1| Slit [Xenopus laevis]
Length = 1530
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 141/451 (31%), Positives = 217/451 (48%), Gaps = 77/451 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C P
Sbjct: 190 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPI 249
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + EF C+G C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 250 HLRGHNVAEVQKREFSCTGQQSFMVHSCSV-LHCPAACTCSNNIVDCRGKGLTEIPTNLP 308
Query: 124 EATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I+E+ AF + L + L N+
Sbjct: 309 ETITEMRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEIAADAFQGLRSLNSLVLYGNK 368
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+++ VD+FQ L +L L+L +N L + G F+ L
Sbjct: 369 ITELPKGLFEGLFSLQLLLLNANKINCLRVDSFQDLHNLNLLSLYDNKLQTIAKGTFSPL 428
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 429 RAIQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 488
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
G+ + RSK+ +G+C A+ +CP CRC VDC + L K
Sbjct: 489 GTE-DYRSKL--------------------SGDCFADLACPEKCRCEGTTVDCSNQKLTK 527
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P +P+ T EL ++ + +L + + FK+ R L N IT++ AF
Sbjct: 528 IPDHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINLSNNKITDIEEGAFEG 581
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L N + + K F + L+ +
Sbjct: 582 ANGVNELLLTSNRMENVRHKMFKGLEGLKTL 612
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/277 (35%), Positives = 137/277 (49%), Gaps = 55/277 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + F+ L+ L LTLNNNN+T L
Sbjct: 141 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGTFRALRDLEVLTLNNNNITRLS 200
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C P H++G N+ ++
Sbjct: 201 VASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPIHLRGHNVAEVQ 260
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF C+G + CS H CP C C++ IVDC
Sbjct: 261 KREFSCTG-----QQSFMVHSCSV-LH-------------------CPAACTCSNNIVDC 295
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 296 RGKGLTEIPTNLPETITEM------------------------------RLEQNSIKVIP 325
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRRI L N I+E+ AF + L +
Sbjct: 326 PGAFSPYKKLRRIDLSNNQISEIAADAFQGLRSLNSL 362
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 128/452 (28%), Positives = 190/452 (42%), Gaps = 111/452 (24%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++TL +++N FICDCHL WL +L P +C +P
Sbjct: 411 SLYDNKLQTIAKGTFSPLRAIQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 470
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K +G+C A+ +CP CRC VDC + L K+P
Sbjct: 471 RLANKRIGQIKSKKFRCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLTKIPD 530
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--------- 170
+P+ T ELRL N+ T L F +LR+I+LS N+I+ + AF+G
Sbjct: 531 HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGAFEGANGVNELLL 590
Query: 171 ---------------LKSLTS------------------------LTLNNNNLTYLPDGV 191
L+ L + L+L +N +T + G
Sbjct: 591 TSNRMENVRHKMFKGLEGLKTLMLRSNHISCVNNDSFTGLSSVRLLSLYDNQITTVAPGA 650
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L TL + N F C+CHL+WL WL++ + +C P +K I D+ +
Sbjct: 651 FDTLHSLSTLNLLANPFNCNCHLAWLGDWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQD 710
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCADGIVDCRE 310
F C D + NSC P+ + CP C C D +V C
Sbjct: 711 FTCD-----------------DGNEDNSCSPLSR----------CPAECTCLDTVVRCSN 743
Query: 311 KGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPK 370
KGL +P +P+ TEL Y+ N + L PK
Sbjct: 744 KGLKSLPKGIPKEVTEL----------------YLDGN---------------VFPLVPK 772
Query: 371 AFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
+NY L I L N I+ L +F+N L
Sbjct: 773 ELSNYMHLTLIDLSNNQISTLSNHSFSNMTHL 804
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 131/277 (47%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+CHL+WL WL++ + +C P
Sbjct: 637 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCHLAWLGDWLRKKRIVTGNPRCQKPY 696
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C E + C+ CP C C D +V C KGL +P +P
Sbjct: 697 FLKEIPIQDVAIQDFTCDDGNEDNS--CSPLSRCPAECTCLDTVVRCSNKGLKSLPKGIP 754
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN--- 180
+ TEL L+ N + L PK +NY L IDLS NQIS ++ +F + L +L L+
Sbjct: 755 KEVTELYLDGN-VFPLVPKELSNYMHLTLIDLSNNQISTLSNHSFSNMTHLLTLILSYNR 813
Query: 181 ---------------------NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
N+++ +P+G F++L L L I N CDC + WL
Sbjct: 814 LRCIPLRAFDRLKSLKLLSLHGNDVSAIPEGAFSDLSALSHLAIGANPLYCDCKMQWLSD 873
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C+G
Sbjct: 874 WVKSEYKEPGIARCSGPGEMADKLLLTTPSKKFSCNG 910
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Query: 90 ECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKR 149
E A +P CP C C VDC L VP +P L L N+IT + FA +
Sbjct: 31 EVAPQP-CPSQCSCTGTTVDCHGLSLRSVPRNIPRNAERLDLNANNITRISKTDFAGLRH 89
Query: 150 LRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
LR + L +N+I+ + AFQ LK L L LN NNL P+ +F +L L +SEN
Sbjct: 90 LRILQLMENKITTIERGAFQDLKELERLRLNRNNLQVFPELLFLGTPKLYRLDLSENQI 148
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 52/120 (43%), Gaps = 11/120 (9%)
Query: 288 ECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYIS 346
E A +P CP C C VDC L VP +P L +I R+ K
Sbjct: 31 EVAPQP-CPSQCSCTGTTVDCHGLSLRSVPRNIPRNAERLDLNANNITRISKT------- 82
Query: 347 NNFKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+F + R +L +N IT + AF + K L R+RL +N++ P F +L R+
Sbjct: 83 -DFAGLRHLRILQLMENKITTIERGAFQDLKELERLRLNRNNLQVFPELLFLGTPKLYRL 141
>gi|47213024|emb|CAF93511.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1253
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 143/451 (31%), Positives = 208/451 (46%), Gaps = 93/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ L F + +LRT R+ N+ CDCH++WL WL++ PRLGLYT+C AP
Sbjct: 49 TLNNNNISRLSVASFNHMPKLRTFRLHSNNLQCDCHVAWLSEWLRQRPRLGLYTQCMAPP 108
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + EF C+G + C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 109 HLRGHNVAEVQKKEFVCTGHHSSSSSACSV-LQCPESCTCSNNIVDCRGKGLTEIPTNLP 167
Query: 124 EATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I+EL AF + L + L N+
Sbjct: 168 ETITEIRLEQNAIKVIPAGAFSPYKKLRRIDLSNNQISELASDAFQGLRSLNSLVLYGNK 227
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I++++ VDAFQ L +L L+L +N L + G F+ L
Sbjct: 228 ITEISKGLFEGLFSLQLLLLNANKIACLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSSL 287
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N FICDCHL WL +L+ P +C +P + + I I +F+CS
Sbjct: 288 RAIQTLHLAQNPFICDCHLKWLADYLQDNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 347
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
RE+ F P K G+C A+ +CP CRC VDC + L K
Sbjct: 348 A----------REQ---YFIPGTEDYRSKLGGDCFADLACPEKCRCEGTTVDCSNQKLTK 394
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKA-FAN 374
+P +P+ T EL RL N+ T L F
Sbjct: 395 IPDHIPQYTAEL------------------------------RLNNNEFTVLEATGIFKK 424
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
LR+I L N IT++ F + +
Sbjct: 425 LPHLRKINLSNNRITDIEEGTFEGASGVNEL 455
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 98/275 (35%), Positives = 138/275 (50%), Gaps = 55/275 (20%)
Query: 131 LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDG 190
L +N I +P KAF ++ + L N IS + AF+ L+ L LTLNNNN++ L
Sbjct: 2 LSENQIQGVPRKAFRGAVEIKNLQLDYNHISCIEDGAFRALRDLEVLTLNNNNISRLSVA 61
Query: 191 VFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEH 250
F + +LRT R+ N+ CDCH++WL WL++ PRLGLYT+C AP H++G N+ ++ +
Sbjct: 62 SFNHMPKLRTFRLHSNNLQCDCHVAWLSEWLRQRPRLGLYTQCMAPPHLRGHNVAEVQKK 121
Query: 251 EFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCRE 310
EF C+G + S +C V + CP C C++ IVDCR
Sbjct: 122 EFVCTGHHSSSSS---------------ACSVLQ----------CPESCTCSNNIVDCRG 156
Query: 311 KGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPK 370
KGL ++P LPE TE+ RLEQN I +P
Sbjct: 157 KGLTEIPTNLPETITEI------------------------------RLEQNAIKVIPAG 186
Query: 371 AFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
AF+ YK+LRRI L N I+EL AF + L +
Sbjct: 187 AFSPYKKLRRIDLSNNQISELASDAFQGLRSLNSL 221
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 111/414 (26%), Positives = 165/414 (39%), Gaps = 117/414 (28%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++TL +++N FICDCHL WL +L+ P +C +P
Sbjct: 270 SLYDNKLQTIAKGTFSSLRAIQTLHLAQNPFICDCHLKWLADYLQDNPIETSGARCTSPR 329
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K G+C A+ +CP CRC VDC
Sbjct: 330 RLANKRIGQIKSKKFRCSAREQYFIPGTEDYRSKLGGDCFADLACPEKCRCEGTTVDCSN 389
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG- 170
+ L K+P +P+ T ELRL N+ T L F LR+I+LS N+I+ + F+G
Sbjct: 390 QKLTKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPHLRKINLSNNRITDIEEGTFEGA 449
Query: 171 -----------------------LKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENS 207
L L +L L +N ++ + + F L +R L + +N
Sbjct: 450 SGVNELILTSNRLENIHHRMLKGLGGLRTLMLRSNKISCVSNSSFVGLSSVRLLSLYDNQ 509
Query: 208 -----------------------------------------------------FICDCHL 214
F C+CHL
Sbjct: 510 ITSVNPGAFGHAALPVHTVRAHHRRTPRHISRTQPSCLSNAVFVLLSNLLANPFNCNCHL 569
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDF 274
+WL WL+R + +C P +K I D+ +F C D
Sbjct: 570 AWLGDWLRRKRIVTGNPRCQNPYFLKEIPIQDVAVQDFACD-----------------DG 612
Query: 275 HPYNSC-PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL 327
+ NSC PV + CP C C D +V C KGL +P LP+ TTEL
Sbjct: 613 NDENSCSPVLR----------CPAECSCLDTVVRCSNKGLTALPKGLPKETTEL 656
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 68/138 (49%), Gaps = 7/138 (5%)
Query: 2 PRTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFA 61
PR ++ + L + VF L L N F C+CHL+WL WL+R + +C
Sbjct: 536 PRHISRTQPSCLSNAVFVLLSNLLA-----NPFNCNCHLAWLGDWLRRKRIVTGNPRCQN 590
Query: 62 PSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPIL 121
P +K I D+ +F C ++ + C+ CP C C D +V C KGL +P
Sbjct: 591 PYFLKEIPIQDVAVQDFACDDGNDENS--CSPVLRCPAECSCLDTVVRCSNKGLTALPKG 648
Query: 122 LPEATTELRLEQNDITEL 139
LP+ TTEL L+ N T++
Sbjct: 649 LPKETTELYLDGNHFTQV 666
>gi|348529464|ref|XP_003452233.1| PREDICTED: slit homolog 2 protein [Oreochromis niloticus]
Length = 1565
Score = 228 bits (580), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 143/451 (31%), Positives = 211/451 (46%), Gaps = 93/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ L F + +LRT R+ N+ CDCH++WL WL++ PRLGLYT+C AP
Sbjct: 189 TLNNNNISRLSVASFNHMPKLRTFRLHSNNLQCDCHVAWLSEWLRQRPRLGLYTQCMAPP 248
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + EF C+G + + + CP C C++ IVDCR KGL ++P LP
Sbjct: 249 HLRGHNVAEVQKKEFVCTGH-QSSSSSSCSVLQCPESCTCSNNIVDCRGKGLTEIPTNLP 307
Query: 124 EATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I+EL AF + L + L N+
Sbjct: 308 ETITEIRLEQNAIKVIPAGAFSPYKKLRRIDLSNNQISELASDAFQGLRSLNSLVLYGNK 367
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I++++ VDAFQ L +L L+L +N L + G F+ L
Sbjct: 368 ITEISKGLFEGLFSLQLLLLNANKIACLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSSL 427
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N FICDCHL WL +L+ P +C +P + + I I +F+CS
Sbjct: 428 RAIQTLHLAQNPFICDCHLKWLADYLQDNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 487
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
RE+ F P N K G+C A+ +CP CRC VDC + L K
Sbjct: 488 A----------REQ---YFIPGNEDYRSKLGGDCFADLACPEKCRCEGTTVDCSNQKLTK 534
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKA-FAN 374
+P +P+ TTEL RL N+ + L F
Sbjct: 535 IPDHIPQYTTEL------------------------------RLNNNEFSVLEATGIFKK 564
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+LR+I L N IT++ F + +
Sbjct: 565 LPQLRKINLSNNRITDIEEGTFEGASGVNEL 595
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 133/480 (27%), Positives = 197/480 (41%), Gaps = 105/480 (21%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++TL +++N FICDCHL WL +L+ P +C +P
Sbjct: 410 SLYDNKLQTIAKGTFSSLRAIQTLHLAQNPFICDCHLKWLADYLQDNPIETSGARCTSPR 469
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K G+C A+ +CP CRC VDC
Sbjct: 470 RLANKRIGQIKSKKFRCSAREQYFIPGNEDYRSKLGGDCFADLACPEKCRCEGTTVDCSN 529
Query: 113 KGLNKVPILLPEATTELRL-------------------------EQNDITELPPKAF--- 144
+ L K+P +P+ TTELRL N IT++ F
Sbjct: 530 QKLTKIPDHIPQYTTELRLNNNEFSVLEATGIFKKLPQLRKINLSNNRITDIEEGTFEGA 589
Query: 145 ---------------------ANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
LR + L N+IS V+ +F GL S+ L+L +N
Sbjct: 590 SGVNELILTSNRLENIHHRILKGLSGLRTLMLRSNRISCVSNSSFVGLSSVRLLSLYDNQ 649
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N F C+CHL+WL WL+R + +C +P +K
Sbjct: 650 ITSMNPGAFDTLHSLSTLNLLANPFNCNCHLAWLGDWLRRKRIVTGNPRCQSPYFLKEIP 709
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
I D+ +F C + E C+ CP C C D
Sbjct: 710 IQDVAVQDFACEDGNDEN--------------------------SCSPMLRCPAECSCLD 743
Query: 304 GIVDCREKGLNKVPILLPEATTELTYM---------VSIDRVDKVLLYSYISNNFKRWTN 354
+V C KGL +P LP+ TTEL Y+ V + + L +N +N
Sbjct: 744 TVVRCSNKGLTTLPRGLPKETTEL-YLDGNHFTQVPVELSNYKHLTLIDLSNNQISTLSN 802
Query: 355 RSRR---------LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
S L N + +P +AF K LR + L NDI+ +P AF + L +
Sbjct: 803 HSLSNMSELLTLILSYNRLRCIPERAFDGLKSLRLLSLHGNDISLIPEGAFKDLSSLSHL 862
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 143/294 (48%), Gaps = 58/294 (19%)
Query: 115 LNKVPILLPEATTEL---RLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L P LL TT+L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 123 LAVFPELLFLGTTKLYRLDLSENQIQGIPRKAFRGAVEIKNLQLDYNHISCIEDGAFRAL 182
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ L F + +LRT R+ N+ CDCH++WL WL++ PRLGLYT
Sbjct: 183 RDLEVLTLNNNNISRLSVASFNHMPKLRTFRLHSNNLQCDCHVAWLSEWLRQRPRLGLYT 242
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C AP H++G N+ ++ + EF C+G + S +
Sbjct: 243 QCMAPPHLRGHNVAEVQKKEFVCTGHQSSSSSSCSVLQ---------------------- 280
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
CP C C++ IVDCR KGL ++P LPE TE+
Sbjct: 281 ---CPESCTCSNNIVDCRGKGLTEIPTNLPETITEI------------------------ 313
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF+ YK+LRRI L N I+EL AF + L +
Sbjct: 314 ------RLEQNAIKVIPAGAFSPYKKLRRIDLSNNQISELASDAFQGLRSLNSL 361
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 157/327 (48%), Gaps = 38/327 (11%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+CHL+WL WL+R + +C +P
Sbjct: 644 SLYDNQITSMNPGAFDTLHSLSTLNLLANPFNCNCHLAWLGDWLRRKRIVTGNPRCQSPY 703
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C ++ + C+ CP C C D +V C KGL +P LP
Sbjct: 704 FLKEIPIQDVAVQDFACEDGNDENS--CSPMLRCPAECSCLDTVVRCSNKGLTTLPRGLP 761
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVD----------------- 166
+ TTEL L+ N T++P + +NYK L IDLS NQIS ++
Sbjct: 762 KETTELYLDGNHFTQVPVE-LSNYKHLTLIDLSNNQISTLSNHSLSNMSELLTLILSYNR 820
Query: 167 -------AFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
AF GLKSL L+L+ N+++ +P+G F +L L L + N CDCH+ WL
Sbjct: 821 LRCIPERAFDGLKSLRLLSLHGNDISLIPEGAFKDLSSLSHLALGANPLYCDCHMQWLSD 880
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG-SSMETRSKIYREECSTDFHPYN 278
W+K + +C P + + +L P +F C+G + ++K HP
Sbjct: 881 WVKSGYKEPGIARCAGPGDMTDKLLLTTPSKKFTCTGPVDINIQAKC---------HPCL 931
Query: 279 SCPVEKPTGECAAEPSCPHPCRCADGI 305
S P K G CA +P + C C G
Sbjct: 932 SNPC-KNDGTCANDPVHYYRCTCPYGF 957
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 59/112 (52%)
Query: 97 CPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLS 156
CP C C VDC +GL VP +P T L L N++T++ FA + LR + L
Sbjct: 36 CPAQCSCTGTTVDCHGQGLRSVPRNIPRNTERLDLNANNLTKITKTDFAGLRHLRVLQLM 95
Query: 157 KNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+N+I+ + AFQ LK L L LN NNL P+ +F +L L +SEN
Sbjct: 96 ENKITTIERGAFQDLKELERLRLNRNNLAVFPELLFLGTTKLYRLDLSENQI 147
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 14/115 (12%)
Query: 295 CPHPCRCADGIVDCREKGLNKVPILLPEATTELTY----MVSIDRVDKVLLYSYISNNFK 350
CP C C VDC +GL VP +P T L + I + D L
Sbjct: 36 CPAQCSCTGTTVDCHGQGLRSVPRNIPRNTERLDLNANNLTKITKTDFAGLRHL------ 89
Query: 351 RWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N IT + AF + K L R+RL +N++ P F +L R+
Sbjct: 90 ----RVLQLMENKITTIERGAFQDLKELERLRLNRNNLAVFPELLFLGTTKLYRL 140
>gi|327273265|ref|XP_003221401.1| PREDICTED: LOW QUALITY PROTEIN: slit homolog 2 protein-like [Anolis
carolinensis]
Length = 1533
Score = 227 bits (579), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 141/451 (31%), Positives = 214/451 (47%), Gaps = 69/451 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 185 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 244
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + E+ CSG C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 245 HLRGHNVAEVQKREYACSGHQSFMAPSCSVL-HCPAACTCSNNIVDCRGKGLAEIPTNLP 303
Query: 124 EATTELRLEQNDI------------------------TELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I +E P +F + L + L N+
Sbjct: 304 ETITEIRLEQNSIKSIPPGAFSPYKKLRRIDLSNNQISEAAPDSFQGLRSLNSLVLYGNK 363
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+++ VDAFQ L +L L+L +N L + G F+ L
Sbjct: 364 ITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 423
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 424 RAIQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 483
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
F P K +G+C A+ +CP CRC VDC + L+K
Sbjct: 484 AKEQY-------------FIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLSK 530
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFAN 374
+P +P+ T EL ++ + +L + + FK+ R L N IT++ F
Sbjct: 531 IPDHIPQYTAEL----RLNNNEFAVLEA--TGIFKKLPQLRKINLSNNKITDIEEGTFEG 584
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L N + + K F + L+ +
Sbjct: 585 ASGVNELLLTSNRLENVRHKMFKGLESLKTL 615
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 101/277 (36%), Positives = 138/277 (49%), Gaps = 55/277 (19%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N I +P KAF ++ + L NQIS + AF+ L+ L LTLNNNN+T L
Sbjct: 136 LDLSENQIHAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 195
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++
Sbjct: 196 VASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQ 255
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ E+ CSG CS H CP C C++ IVDC
Sbjct: 256 KREYACSG-----HQSFMAPSCSV-LH-------------------CPAACTCSNNIVDC 290
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL ++P LPE TE+ RLEQN I +P
Sbjct: 291 RGKGLAEIPTNLPETITEI------------------------------RLEQNSIKSIP 320
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ YK+LRRI L N I+E P +F + L +
Sbjct: 321 PGAFSPYKKLRRIDLSNNQISEAAPDSFQGLRSLNSL 357
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 131/462 (28%), Positives = 200/462 (43%), Gaps = 93/462 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++TL +++N FICDCHL WL +L P +C +P
Sbjct: 406 SLYDNKLQTIAKGTFSPLRAIQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 465
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K +G+C A+ +CP CRC VDC
Sbjct: 466 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSN 525
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG- 170
+ L+K+P +P+ T ELRL N+ L F +LR+I+LS N+I+ + F+G
Sbjct: 526 QKLSKIPDHIPQYTAELRLNNNEFAVLEATGIFKKLPQLRKINLSNNKITDIEEGTFEGA 585
Query: 171 -----------------------LKSLTS------------------------LTLNNNN 183
L+SL + L+L +N
Sbjct: 586 SGVNELLLTSNRLENVRHKMFKGLESLKTLMLRSNRISCVSNDSFTGLSSVRLLSLYDNQ 645
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N F C+CHL+WL WL++ + +C P +K
Sbjct: 646 ITTIAPGAFDTLHSLSTLNLLANPFNCNCHLAWLGEWLRKKRIVTGNPRCQKPYFLKEIP 705
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
I D+ +F C D + NSC P C AE C C D
Sbjct: 706 IQDVAIQDFTCD-----------------DGNDENSC---SPLSRCPAE------CTCLD 739
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQND 363
+V C KGL +P +P+ TEL +D L+ +S N+K T L N
Sbjct: 740 TVVRCSNKGLKSLPKGIPKDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNNR 792
Query: 364 ITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I+ L ++F+N +L + L N + +P + F K LR +
Sbjct: 793 ISTLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLL 834
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 135/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+CHL+WL WL++ + +C P
Sbjct: 640 SLYDNQITTIAPGAFDTLHSLSTLNLLANPFNCNCHLAWLGEWLRKKRIVTGNPRCQKPY 699
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C ++ + C+ CP C C D +V C KGL +P +P
Sbjct: 700 FLKEIPIQDVAIQDFTCDDGNDENS--CSPLSRCPAECTCLDTVVRCSNKGLKSLPKGIP 757
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
+ TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 758 KDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 816
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 817 LRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLHCDCNMQWLSD 876
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 877 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 913
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L+ N+++ +P+G F +L L L I N CDC++ WL W+K + +C P
Sbjct: 835 SLHGNDISVVPEGAFNDLSALSHLAIGANPLHCDCNMQWLSDWVKSEYKEPGIARCAGPG 894
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ + +L P +F C GPV+
Sbjct: 895 EMADKLLLTTPSKKFTCQGPVD 916
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 45/119 (37%), Gaps = 30/119 (25%)
Query: 287 GECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYIS 346
G A +P CP C C+ DC L VP
Sbjct: 24 GAVAPQP-CPAQCSCSAAPXDCHGLALRSVP----------------------------- 53
Query: 347 NNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R T R + L N+IT + FA + LR ++L +N I+ + AF + K L R+
Sbjct: 54 RNVPRNTERCKDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERL 112
>gi|426246245|ref|XP_004016905.1| PREDICTED: slit homolog 3 protein isoform 2 [Ovis aries]
Length = 1474
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 154/459 (33%), Positives = 213/459 (46%), Gaps = 84/459 (18%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 139 TLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFTLCMAPV 198
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G ++ D+ + E+ C GP +P A SCP C C++ IVDCR KGL ++P LP
Sbjct: 199 HLRGFSVADVQKKEYVCPGPHSEPPTCNANSISCPSACTCSNNIVDCRGKGLTEIPANLP 258
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N
Sbjct: 259 EGIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 318
Query: 184 LTYLPDGVFAELFRLRTL----------------------------------------RI 203
+T + G+F L L+ L I
Sbjct: 319 ITEIAKGLFDGLVSLQLLPAGPLSLAGARGNKINCLRVNTFQDLQSLSLLSLYDNKLQTI 378
Query: 204 SENSFICDCHLSWLH------------RWLKRY----PRLGLYTKCFAPSHIKGQNILDI 247
S+ F + LH RWL Y P +C +P + + I I
Sbjct: 379 SKGLFAPLQAIQTLHLAQNPFVCDCHLRWLADYLQDNPIETSGARCSSPRRLANKRISQI 438
Query: 248 PEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVD 307
+F+CSG S+ YR S+ EC + CP CRC IVD
Sbjct: 439 KSKKFRCSG------SEDYRSRFSS---------------ECFMDLVCPDRCRCEGTIVD 477
Query: 308 CREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITE 366
C + L +VP LPE T+L D VL + I FK+ N R L N I E
Sbjct: 478 CSNQKLARVPSHLPEYVTDLRLN---DNEISVLEATGI---FKKLPNLRKINLSNNRIKE 531
Query: 367 LPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ AF ++ + L N + + + F L+ +
Sbjct: 532 VREGAFDGAASVQELMLTGNQLEAVHGRVFRGLSGLKTL 570
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 154/334 (46%), Gaps = 78/334 (23%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC GL VP +P LRL +N + LP F + +L R+DL
Sbjct: 33 ACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLRLNKNKLQVLPELLFQSNLKLTRLDL 92
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELF------------------- 196
S+NQI + AF+G+ + +L L+NN+++ + DG F L
Sbjct: 93 SENQILGIPRKAFRGIADVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTS 152
Query: 197 -----RLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
++RTLR+ N CDCHL+WL WL++ +G +T C AP H++G ++ D+ + E
Sbjct: 153 FNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFTLCMAPVHLRGFSVADVQKKE 212
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
+ C G P +P A SCP C C++ IVDCR K
Sbjct: 213 YVCPG------------------------PHSEPPTCNANSISCPSACTCSNNIVDCRGK 248
Query: 312 GLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKA 371
GL ++P LPE E+ RLEQN I +P A
Sbjct: 249 GLTEIPANLPEGIVEI------------------------------RLEQNSIKSIPAGA 278
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F YK+L+RI + +N I+++ P AF K L +
Sbjct: 279 FTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 312
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/468 (26%), Positives = 201/468 (42%), Gaps = 96/468 (20%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
+N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P +
Sbjct: 372 DNKLQTISKGLFAPLQAIQTLHLAQNPFVCDCHLRWLADYLQDNPIETSGARCSSPRRLA 431
Query: 67 GQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+ I I +F+CSG + + + EC + CP CRC IVDC + L +VP LP
Sbjct: 432 NKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPDRCRCEGTIVDCSNQKLARVPSHLP 491
Query: 124 EATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVDA------------ 167
E T+LRL N+I+ L F LR+I+LS N+I +V A D
Sbjct: 492 EYVTDLRLNDNEISVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAASVQELMLTGN 551
Query: 168 ---------FQGLKSLTS------------------------LTLNNNNLTYLPDGVFAE 194
F+GL L + L+L +N +T + G F
Sbjct: 552 QLEAVHGRVFRGLSGLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTT 611
Query: 195 LFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
L L T+ + N F C+CHL+WL +WL++ + +C P +K I D+ +F C
Sbjct: 612 LVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTC 671
Query: 255 SGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLN 314
G+ + C P CP C C + +V C +GL
Sbjct: 672 DGNDESS---------------------------CQLGPRCPEQCTCVETVVRCSNRGLR 704
Query: 315 KVPILLPEATTEL----TYMVSIDR----VDKVLLYSYISNNFKRWTNRSRR-------- 358
+P +P+ TEL ++ ++ + + + L +N+ TN +
Sbjct: 705 ALPKGIPKDVTELYLEGNHLTAVPKELSSLRHLTLIDLSNNSIGMLTNYTFSNMSHLSTL 764
Query: 359 -LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P +F + LR + L NDI+ +P +F + L +
Sbjct: 765 ILSYNRLRCIPVHSFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHL 812
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 150/326 (46%), Gaps = 39/326 (11%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CHL+WL +WL++ + +C P
Sbjct: 595 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPF 654
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C + +V C +GL +P +P
Sbjct: 655 FLKEIPIQDVAIQDFTCDGNDES---SCQLGPRCPEQCTCVETVVRCSNRGLRALPKGIP 711
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISK--------------------- 162
+ TEL LE N +T +P K ++ + L IDLS N I
Sbjct: 712 KDVTELYLEGNHLTAVP-KELSSLRHLTLIDLSNNSIGMLTNYTFSNMSHLSTLILSYNR 770
Query: 163 ---VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
+ V +F GL+SL LTL+ N+++ +P+G F +L L L + N CDC L WL
Sbjct: 771 LRCIPVHSFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSE 830
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG-SSMETRSKIYREECSTDFHPYN 278
W+K + +C +P + + +L P H F+C G + +K P
Sbjct: 831 WVKAGYKEPGIARCSSPEPMADRLLLTTPTHRFQCKGPVDINIVAKC---------DPCL 881
Query: 279 SCPVEKPTGECAAEPSCPHPCRCADG 304
S P K G C+ +P H C C G
Sbjct: 882 SSPC-KNNGSCSQDPVERHRCACPHG 906
>gi|426246243|ref|XP_004016904.1| PREDICTED: slit homolog 3 protein isoform 1 [Ovis aries]
Length = 1518
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 154/459 (33%), Positives = 213/459 (46%), Gaps = 84/459 (18%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 187 TLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFTLCMAPV 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G ++ D+ + E+ C GP +P A SCP C C++ IVDCR KGL ++P LP
Sbjct: 247 HLRGFSVADVQKKEYVCPGPHSEPPTCNANSISCPSACTCSNNIVDCRGKGLTEIPANLP 306
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N
Sbjct: 307 EGIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 366
Query: 184 LTYLPDGVFAELFRLRTL----------------------------------------RI 203
+T + G+F L L+ L I
Sbjct: 367 ITEIAKGLFDGLVSLQLLPAGPLSLAGARGNKINCLRVNTFQDLQSLSLLSLYDNKLQTI 426
Query: 204 SENSFICDCHLSWLH------------RWLKRY----PRLGLYTKCFAPSHIKGQNILDI 247
S+ F + LH RWL Y P +C +P + + I I
Sbjct: 427 SKGLFAPLQAIQTLHLAQNPFVCDCHLRWLADYLQDNPIETSGARCSSPRRLANKRISQI 486
Query: 248 PEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVD 307
+F+CSG S+ YR S+ EC + CP CRC IVD
Sbjct: 487 KSKKFRCSG------SEDYRSRFSS---------------ECFMDLVCPDRCRCEGTIVD 525
Query: 308 CREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITE 366
C + L +VP LPE T+L D VL + I FK+ N R L N I E
Sbjct: 526 CSNQKLARVPSHLPEYVTDLRLN---DNEISVLEATGI---FKKLPNLRKINLSNNRIKE 579
Query: 367 LPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ AF ++ + L N + + + F L+ +
Sbjct: 580 VREGAFDGAASVQELMLTGNQLEAVHGRVFRGLSGLKTL 618
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 125/468 (26%), Positives = 201/468 (42%), Gaps = 96/468 (20%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
+N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P +
Sbjct: 420 DNKLQTISKGLFAPLQAIQTLHLAQNPFVCDCHLRWLADYLQDNPIETSGARCSSPRRLA 479
Query: 67 GQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+ I I +F+CSG + + + EC + CP CRC IVDC + L +VP LP
Sbjct: 480 NKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPDRCRCEGTIVDCSNQKLARVPSHLP 539
Query: 124 EATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVDA------------ 167
E T+LRL N+I+ L F LR+I+LS N+I +V A D
Sbjct: 540 EYVTDLRLNDNEISVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAASVQELMLTGN 599
Query: 168 ---------FQGLKSLTS------------------------LTLNNNNLTYLPDGVFAE 194
F+GL L + L+L +N +T + G F
Sbjct: 600 QLEAVHGRVFRGLSGLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTT 659
Query: 195 LFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
L L T+ + N F C+CHL+WL +WL++ + +C P +K I D+ +F C
Sbjct: 660 LVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTC 719
Query: 255 SGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLN 314
G+ + C P CP C C + +V C +GL
Sbjct: 720 DGNDESS---------------------------CQLGPRCPEQCTCVETVVRCSNRGLR 752
Query: 315 KVPILLPEATTEL----TYMVSIDR----VDKVLLYSYISNNFKRWTNRSRR-------- 358
+P +P+ TEL ++ ++ + + + L +N+ TN +
Sbjct: 753 ALPKGIPKDVTELYLEGNHLTAVPKELSSLRHLTLIDLSNNSIGMLTNYTFSNMSHLSTL 812
Query: 359 -LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P +F + LR + L NDI+ +P +F + L +
Sbjct: 813 ILSYNRLRCIPVHSFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHL 860
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/294 (32%), Positives = 141/294 (47%), Gaps = 57/294 (19%)
Query: 115 LNKVPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL ++ T L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 121 LQVLPELLFQSNLKLTRLDLSENQILGIPRKAFRGIADVKNLQLDNNHISCIEDGAFRAL 180
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T
Sbjct: 181 RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFT 240
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
C AP H++G ++ D+ + E+ C G P +P A
Sbjct: 241 LCMAPVHLRGFSVADVQKKEYVCPG------------------------PHSEPPTCNAN 276
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++ IVDCR KGL ++P LPE E+
Sbjct: 277 SISCPSACTCSNNIVDCRGKGLTEIPANLPEGIVEI------------------------ 312
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF YK+L+RI + +N I+++ P AF K L +
Sbjct: 313 ------RLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 360
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 150/326 (46%), Gaps = 39/326 (11%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CHL+WL +WL++ + +C P
Sbjct: 643 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPF 702
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C + +V C +GL +P +P
Sbjct: 703 FLKEIPIQDVAIQDFTCDGNDES---SCQLGPRCPEQCTCVETVVRCSNRGLRALPKGIP 759
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISK--------------------- 162
+ TEL LE N +T +P K ++ + L IDLS N I
Sbjct: 760 KDVTELYLEGNHLTAVP-KELSSLRHLTLIDLSNNSIGMLTNYTFSNMSHLSTLILSYNR 818
Query: 163 ---VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
+ V +F GL+SL LTL+ N+++ +P+G F +L L L + N CDC L WL
Sbjct: 819 LRCIPVHSFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSE 878
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG-SSMETRSKIYREECSTDFHPYN 278
W+K + +C +P + + +L P H F+C G + +K P
Sbjct: 879 WVKAGYKEPGIARCSSPEPMADRLLLTTPTHRFQCKGPVDINIVAKC---------DPCL 929
Query: 279 SCPVEKPTGECAAEPSCPHPCRCADG 304
S P K G C+ +P H C C G
Sbjct: 930 SSPC-KNNGSCSQDPVERHRCACPHG 954
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ VDC GL VP +P L +D+ + +F
Sbjct: 33 ACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLD-------LDRNNITRITKTDFAGLK 85
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R LE N ++ + AF + K+L R+RL +N + LP F + +L R+
Sbjct: 86 NLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSNLKLTRL 138
>gi|148235731|ref|NP_001090702.1| slit homolog 1 precursor [Xenopus (Silurana) tropicalis]
gi|118763568|gb|AAI28627.1| slit1 protein [Xenopus (Silurana) tropicalis]
gi|134026206|gb|AAI35998.1| slit1 protein [Xenopus (Silurana) tropicalis]
Length = 1529
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 141/454 (31%), Positives = 218/454 (48%), Gaps = 74/454 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N+ CDCHL+WL +WL++ P +GL+T+C PS
Sbjct: 186 TLNNNNITAIPVSSFNHMPKLRTFRLHSNNLFCDCHLAWLSQWLRQRPTIGLFTQCTGPS 245
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGE-CAAE-PSCPHPCRCADGIVDCREKGLNKVPIL 121
++G N+ +I +HEF CSG + P+ + C+ SCP C C++GIVDCR KGL +P
Sbjct: 246 PLRGLNVAEIQKHEFSCSGQSDPPSSQICSLSIGSCPAMCTCSNGIVDCRGKGLTAIPAN 305
Query: 122 LPEATTELRLE------------------------QNDITELPPKAFANYKRLRRIDLSK 157
LPE TE+RLE N I+E+ P AF + L + L
Sbjct: 306 LPETMTEIRLELNGIKSVPPGAFSPYKKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYG 365
Query: 158 NQISK------------------------VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFA 193
N+I+ + D FQ L++L+ L+L +N + L G FA
Sbjct: 366 NKITDLPKGVFSGLHALQLLLLNANKINCIRADTFQDLQNLSLLSLYDNKIQSLAKGTFA 425
Query: 194 ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFK 253
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I +F+
Sbjct: 426 ALRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANKRIGQIKSKKFR 485
Query: 254 CSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL 313
CS Y + D+ NS EC ++ CP CRC +VDC L
Sbjct: 486 CSAKEQ------YFIPGTEDYQ-LNS--------ECNSDVVCPPKCRCESNVVDCSNLKL 530
Query: 314 NKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRR--LEQNDITELPPKA 371
K+P +P++T EL R++ + + + R ++ L N I+E+ A
Sbjct: 531 TKIPDRIPQSTAEL-------RLNNNEIATLEATGLFRKLPHLKKINLSNNKISEIEDAA 583
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + + L N + + F + LR +
Sbjct: 584 FEGAASVSELHLTANHLESVRSGMFRGLEGLRTL 617
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/294 (37%), Positives = 152/294 (51%), Gaps = 55/294 (18%)
Query: 115 LNKVPILL---PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L+ +P LL +A + L L +N I +P K F L+ + L KNQIS + AF+ L
Sbjct: 120 LHTLPELLFQNNQALSRLDLSENLIQAIPRKTFRGATELKNLQLDKNQISCIEDGAFRAL 179
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T +P F + +LRT R+ N+ CDCHL+WL +WL++ P +GL+T
Sbjct: 180 RGLEVLTLNNNNITAIPVSSFNHMPKLRTFRLHSNNLFCDCHLAWLSQWLRQRPTIGLFT 239
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C PS ++G N+ +I +HEF CSG S S+I CS
Sbjct: 240 QCTGPSPLRGLNVAEIQKHEFSCSGQSDPPSSQI----CSLSIG---------------- 279
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++GIVDCR KGL +P LPE TE+
Sbjct: 280 --SCPAMCTCSNGIVDCRGKGLTAIPANLPETMTEI------------------------ 313
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLE N I +PP AF+ YK+LRRI L N I+E+ P AF + L +
Sbjct: 314 ------RLELNGIKSVPPGAFSPYKKLRRIDLSNNQISEIAPDAFQGLRSLNSL 361
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 128/477 (26%), Positives = 198/477 (41%), Gaps = 101/477 (21%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G FA L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 410 SLYDNKIQSLAKGTFAALRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPR 469
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + EC ++ CP CRC +VDC
Sbjct: 470 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVVCPPKCRCESNVVDCSNLK 529
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L K+P +P++T ELRL N+I L F L++I+LS N+IS++ AF+G
Sbjct: 530 LTKIPDRIPQSTAELRLNNNEIATLEATGLFRKLPHLKKINLSNNKISEIEDAAFEGAAS 589
Query: 171 ---------------------LKSLTSLTLNN------------------------NNLT 185
L+ L +L L N N ++
Sbjct: 590 VSELHLTANHLESVRSGMFRGLEGLRTLMLRNNRVSCVHNDSFTGLRNVRLLSLYDNQIS 649
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+C L+WL WL++ + +C P ++ +
Sbjct: 650 TITPGAFDTLQSLSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQ 709
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E CA +P CP C C D +
Sbjct: 710 DVAFPDFRCEDGQEEL--------------------------SCAPQPQCPQECTCLDTV 743
Query: 306 VDCREKGLNKVPILLPEATTEL-------TYMVSIDRVDKVLLYSYISNN------FKRW 352
V C K L +P +P+ TEL T + K L +SNN +
Sbjct: 744 VRCSNKHLLSLPKGIPKNVTELYLDGNQFTMVPGQLSSFKYLQLVDLSNNKISSLSNSSF 803
Query: 353 TNRSRR----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
TN S+ L N + +PP AF + LR + + NDI+ LP F++ L +
Sbjct: 804 TNMSQLTTLILSYNSLQCIPPLAFEGLRSLRLLSVHGNDISSLPEGIFSDVTSLSHL 860
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 143/277 (51%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N ++ + G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 642 SLYDNQISTITPGAFDTLQSLSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPD 701
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ + CA +P CP C C D +V C K L +P +P
Sbjct: 702 FLRQIPLQDVAFPDFRCEDGQEELS--CAPQPQCPQECTCLDTVVRCSNKHLLSLPKGIP 759
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVD----------------- 166
+ TEL L+ N T +P + +++K L+ +DLS N+IS ++
Sbjct: 760 KNVTELYLDGNQFTMVPGQ-LSSFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNS 818
Query: 167 -------AFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
AF+GL+SL L+++ N+++ LP+G+F+++ L L I N CDC+L WL
Sbjct: 819 LQCIPPLAFEGLRSLRLLSVHGNDISSLPEGIFSDVTSLSHLAIGANPLYCDCNLRWLSN 878
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + G+ +L P +F+C+G
Sbjct: 879 WVKTGYKEPGIARCTGPPEMDGKLLLTTPAKKFECNG 915
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 57/111 (51%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
CP C C+ VDC L VP +P +T L L N+IT + F+ K+LR + L
Sbjct: 32 GCPALCTCSGTTVDCHGLALKGVPKNIPRSTERLELYGNNITRINKNDFSGLKQLRVLQL 91
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
+NQIS V AF +K L L LN N L LP+ +F L L +SEN
Sbjct: 92 MENQISNVERGAFDDMKELERLRLNRNQLHTLPELLFQNNQALSRLDLSEN 142
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 5/109 (4%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+++ N+++ LP+G+F+++ L L I N CDC+L WL W+K + +C P
Sbjct: 837 SVHGNDISSLPEGIFSDVTSLSHLAIGANPLYCDCNLRWLSNWVKTGYKEPGIARCTGPP 896
Query: 64 HIKGQNILDIPEHEFKCSGP----VEKPTGECAAEPSCPHPCRCADGIV 108
+ G+ +L P +F+C+GP + C ++P C + C D V
Sbjct: 897 EMDGKLLLTTPAKKFECNGPPSLNILAKCNPCLSDP-CKNQGTCQDDAV 944
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELT-YMVSIDRVDKVLLYSYISNNFKRW 352
CP C C+ VDC L VP +P +T L Y +I R++K N+F
Sbjct: 32 GCPALCTCSGTTVDCHGLALKGVPKNIPRSTERLELYGNNITRINK--------NDFSGL 83
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I+ + AF + K L R+RL +N + LP F N + L R+
Sbjct: 84 KQLRVLQLMENQISNVERGAFDDMKELERLRLNRNQLHTLPELLFQNNQALSRL 137
>gi|410901383|ref|XP_003964175.1| PREDICTED: slit homolog 1 protein-like [Takifugu rubripes]
Length = 1533
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 142/444 (31%), Positives = 209/444 (47%), Gaps = 96/444 (21%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ +P F + +LRT R+ N+ CDCHL WL +WL++ P +GL+T+C +P+
Sbjct: 191 TLNNNNISSIPVSSFNHMPKLRTFRLHSNNLHCDCHLGWLAQWLRQRPTVGLFTQCTSPA 250
Query: 64 HIKGQNILDIPEHEFKCSGPVEK-PTGECA-AEPSCPHPCRCADGIVDCREKGLNKVPIL 121
++G N+ ++ +HEF CSG E T C+ SCP C C++ IVDCR KGL +P
Sbjct: 251 ELRGLNVAEVQKHEFSCSGHQESFATQACSVGGGSCPAMCTCSNNIVDCRGKGLTAIPAN 310
Query: 122 LPEATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLSK 157
LPE+ E+RLEQN I+E+ P AF + L + L
Sbjct: 311 LPESMAEIRLEQNGIKSVPPGAFSPYKKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYG 370
Query: 158 NQISK------------------------VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFA 193
N+I+ V +AFQ L++L+ L+L +N + L G F
Sbjct: 371 NKITDLPKGVFDGLYALQLLLLNANKIHCVRANAFQDLQNLSLLSLYDNKIQTLAKGTFT 430
Query: 194 ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFK 253
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I +F+
Sbjct: 431 SLRAIQTLHLAQNPFICDCNLKWLADYLRSNPIETSGARCASPRRLANKRIGQIKSKKFR 490
Query: 254 CSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL 313
CS Y + D N+ C ++P CP CRC +VDC L
Sbjct: 491 CSAKEQ------YFIPGTEDTRLSNA---------CNSDPVCPPKCRCESNVVDCSNLKL 535
Query: 314 NKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITEL-PPKAF 372
K+P +P +T EL RL NDIT L AF
Sbjct: 536 TKIPEHIPSSTNEL------------------------------RLNNNDITTLEASGAF 565
Query: 373 ANYKRLRRIRLEQNDITELPPKAF 396
+ +L++I L N ITE+ AF
Sbjct: 566 KSLSQLKKINLSNNKITEIEDGAF 589
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 153/294 (52%), Gaps = 55/294 (18%)
Query: 115 LNKVPILLPE---ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L ++P LL + A + L L +N I +P KAF ++ + L KN I + AF+ +
Sbjct: 125 LQQLPELLFQKNPALSRLDLSENFIQSIPRKAFRGATDIKNLQLDKNHIGCIEDGAFRAM 184
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ +P F + +LRT R+ N+ CDCHL WL +WL++ P +GL+T
Sbjct: 185 RGLEVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNNLHCDCHLGWLAQWLRQRPTVGLFT 244
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C +P+ ++G N+ ++ +HEF CSG ++E +T +C V
Sbjct: 245 QCTSPAELRGLNVAEVQKHEFSCSG---------HQESFAT-----QACSV--------G 282
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++ IVDCR KGL +P LPE+ E+
Sbjct: 283 GGSCPAMCTCSNNIVDCRGKGLTAIPANLPESMAEI------------------------ 318
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +PP AF+ YK+LRRI L N I+E+ P AF + L +
Sbjct: 319 ------RLEQNGIKSVPPGAFSPYKKLRRIDLSNNQISEIAPDAFQGLRSLNSL 366
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 181/453 (39%), Gaps = 91/453 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 415 SLYDNKIQTLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADYLRSNPIETSGARCASPR 474
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + + C ++P CP CRC +VDC
Sbjct: 475 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDTRLSNACNSDPVCPPKCRCESNVVDCSNLK 534
Query: 115 LNKVPILLPEATTELRL-------------------------EQNDITELPPKAFANYKR 149
L K+P +P +T ELRL N ITE+ AF
Sbjct: 535 LTKIPEHIPSSTNELRLNNNDITTLEASGAFKSLSQLKKINLSNNKITEIEDGAFEGASS 594
Query: 150 LRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN------------------------NNLT 185
+ + L+ NQI V F+GL+ L L L N N LT
Sbjct: 595 VIELHLTANQIDSVRSSMFRGLEGLRMLMLRNNKISCVHNDSFTGLHNVRLLSLYDNQLT 654
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N+F CDC L+WL WL+ + +C P +K +
Sbjct: 655 TITPGAFDTLQALSTLNLLANTFNCDCRLAWLGDWLRSRKIVTGNPRCQRPGFLKEIPLQ 714
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ + +F+C E C P CP C C + +
Sbjct: 715 DVAQPDFRCDEGQEEL--------------------------SCVPRPQCPSECTCLETV 748
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L+ +P +P TEL +D ++ +S FK + L N I
Sbjct: 749 VRCSNKHLHALPKGIPRNVTELY----LDGNQFSIVPKELS-GFKYL--QLVDLSNNRIN 801
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAFAN 398
L +F+N +L + L N + +P AF
Sbjct: 802 SLTNSSFSNMSQLTTLILSYNSLRCIPKMAFGG 834
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 136/277 (49%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N LT + G F L L TL + N+F CDC L+WL WL+ + +C P
Sbjct: 647 SLYDNQLTTITPGAFDTLQALSTLNLLANTFNCDCRLAWLGDWLRSRKIVTGNPRCQRPG 706
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K + D+ + +F+C E+ + C P CP C C + +V C K L+ +P +P
Sbjct: 707 FLKEIPLQDVAQPDFRCDEGQEELS--CVPRPQCPSECTCLETVVRCSNKHLHALPKGIP 764
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
TEL L+ N + + PK + +K L+ +DLS N+I+ + +F + LT+L L+ N+
Sbjct: 765 RNVTELYLDGNQFS-IVPKELSGFKYLQLVDLSNNRINSLTNSSFSNMSQLTTLILSYNS 823
Query: 184 L------------------------TYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
L + LPDG+F ++ L L I N CDC L WL
Sbjct: 824 LRCIPKMAFGGLHSLRLLSLHGNEISELPDGIFNDVTSLSHLAIGANPLYCDCRLRWLSD 883
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C+G
Sbjct: 884 WVKTGYKEPGIARCAGPQGMEGKLLLTTPAKKFECTG 920
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 57/111 (51%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC GL +P +P L L N++T + FA K +R + L
Sbjct: 37 ACPALCTCSGTTVDCHGLGLRTMPRNIPRNAERLELNGNNLTRITKSDFAGLKYIRVLQL 96
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
+NQI+ + AF +K L L LN N L LP+ +F + L L +SEN
Sbjct: 97 MENQITVIERGAFDDMKELERLRLNRNQLQQLPELLFQKNPALSRLDLSEN 147
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
N ++ LPDG+F ++ L L I N CDC L WL W+K + +C P ++
Sbjct: 845 GNEISELPDGIFNDVTSLSHLAIGANPLYCDCRLRWLSDWVKTGYKEPGIARCAGPQGME 904
Query: 67 GQNILDIPEHEFKCSGPVE 85
G+ +L P +F+C+G V+
Sbjct: 905 GKLLLTTPAKKFECTGDVD 923
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 14/116 (12%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTY----MVSIDRVDKVLLYSYISNNF 349
+CP C C+ VDC GL +P +P L + I + D L YI
Sbjct: 37 ACPALCTCSGTTVDCHGLGLRTMPRNIPRNAERLELNGNNLTRITKSDFAGL-KYI---- 91
Query: 350 KRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N IT + AF + K L R+RL +N + +LP F L R+
Sbjct: 92 -----RVLQLMENQITVIERGAFDDMKELERLRLNRNQLQQLPELLFQKNPALSRL 142
>gi|344243172|gb|EGV99275.1| Slit-like 1 protein [Cricetulus griseus]
Length = 1482
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 144/449 (32%), Positives = 218/449 (48%), Gaps = 65/449 (14%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 187 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEK---PTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
++G N+ ++ + EF CSG E PT + SCP C C+ GIVDCR KGL +P
Sbjct: 247 SLRGLNVAEVQKSEFSCSGQGESTRVPTCT-LSSGSCPAMCTCSSGIVDCRGKGLTAIPA 305
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN 180
LPE TE+ L N I E+ P AF + L + L N+I+ + F GL +L L LN
Sbjct: 306 NLPETMTEIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLN 365
Query: 181 ------------------------NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSW 216
+N + L G F L ++TL +++N FICDC+L W
Sbjct: 366 ANKINCIRPDTFQDLQSLSLLSLYDNKIQSLTKGTFTSLRAIQTLHLAQNPFICDCNLKW 425
Query: 217 LHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHP 276
L +L+ P +C +P + + I I +F+CS Y + D+H
Sbjct: 426 LADFLRTNPIETSGARCASPRRLANKRIGQIKSKKFRCSAKEQ------YFIPGTEDYH- 478
Query: 277 YNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRV 336
NS EC ++ +CPH CRC +V+C L+K+P +P++T EL +S ++V
Sbjct: 479 LNS--------ECTSDVACPHKCRCEASVVECSSLKLSKIPERIPQSTAELN--LSNNKV 528
Query: 337 DKV-------------------LLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFANYK 376
++ L S S F+ R+ L N I+ + +F +
Sbjct: 529 SEIEDGTFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLR 588
Query: 377 RLRRIRLEQNDITELPPKAFANYKRLRRM 405
+R + L N IT + P AF + L +
Sbjct: 589 NVRLLSLYDNHITTISPGAFDTLQALSTL 617
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/275 (34%), Positives = 133/275 (48%), Gaps = 52/275 (18%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+A + L L +N + +P KAF L+ + L KNQIS + AF+ L+ L LTLNNNN
Sbjct: 133 QALSRLDLSENALQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNN 192
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+ ++G N
Sbjct: 193 ITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLN 252
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
+ ++ + EF CSG TR +C + + SCP C C+
Sbjct: 253 VAEVQKSEFSCSGQGESTRVP--------------TCTL--------SSGSCPAMCTCSS 290
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQND 363
GIVDCR KGL +P LPE TE+ L N
Sbjct: 291 GIVDCRGKGLTAIPANLPETMTEID------------------------------LSNNQ 320
Query: 364 ITELPPKAFANYKRLRRIRLEQNDITELPPKAFAN 398
I E+ P AF + L + L N IT+LP F
Sbjct: 321 IAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGG 355
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 184/423 (43%), Gaps = 66/423 (15%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
+N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P +
Sbjct: 390 DNKIQSLTKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLA 449
Query: 67 GQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKGLNK 117
+ I I +F+CS + EC ++ +CPH CRC +V+C L+K
Sbjct: 450 NKRIGQIKSKKFRCSAKEQYFIPGTEDYHLNSECTSDVACPHKCRCEASVVECSSLKLSK 509
Query: 118 VPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQ------------------ 159
+P +P++T EL L N ++E+ F + + L+ NQ
Sbjct: 510 IPERIPQSTAELNLSNNKVSEIEDGTFEGAASVSELHLTANQLESIRSGMFRGLDGLRTL 569
Query: 160 ------ISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH 213
IS + D+F GL+++ L+L +N++T + G F L L TL + N F C+C
Sbjct: 570 MLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCQ 629
Query: 214 LSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTD 273
L+WL WL++ + +C P ++ + D+ +F+C E
Sbjct: 630 LAWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRCEEGQEEVG----------- 678
Query: 274 FHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSI 333
C P CP C C D +V C K L +P +P+ TEL +
Sbjct: 679 ---------------CLPRPQCPQECACLDTVVRCSNKHLQALPKGIPKNVTELY----L 719
Query: 334 DRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPP 393
D L+ +S FK + L N I+ L +F N +L + L N + +PP
Sbjct: 720 DGNQFTLVPGQLS-TFKYL--QLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPP 776
Query: 394 KAF 396
AF
Sbjct: 777 LAF 779
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 134/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N++T + G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 594 SLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPD 653
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ C P CP C C D +V C K L +P +P
Sbjct: 654 FLRQIPLQDVAFPDFRCEEGQEEVG--CLPRPQCPQECACLDTVVRCSNKHLQALPKGIP 711
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TEL L+ N T L P + +K L+ +DLS N+IS ++ +F + LT+L L+ N
Sbjct: 712 KNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 770
Query: 184 LTYLP------------------------DGVFAELFRLRTLRISENSFICDCHLSWLHR 219
L +P +G+FA++ L L I N CDCHL WL
Sbjct: 771 LQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSS 830
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 831 WVKTGYKEPGIARCAGPPDMEGKLLLTTPAKKFECQG 867
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 57/113 (50%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDC GL +P +P T L L N+IT + FA K+LR + L
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQL 92
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+NQI V AF +K L L LN N L LP+ +F L L +SEN+
Sbjct: 93 MENQIGAVERGAFDDMKELERLRLNRNQLHVLPELLFQNNQALSRLDLSENAL 145
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C VDC GL +P +P T L + I R+ K N+F
Sbjct: 33 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHK--------NDFAGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I + AF + K L R+RL +N + LP F N + L R+
Sbjct: 85 KQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHVLPELLFQNNQALSRL 138
>gi|390340150|ref|XP_784844.3| PREDICTED: LOW QUALITY PROTEIN: slit homolog 1 protein-like,
partial [Strongylocentrotus purpuratus]
Length = 1290
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 145/451 (32%), Positives = 212/451 (47%), Gaps = 78/451 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
LN+NNLT L F + L+ LR+S+N CDCHLSWL WL+ + LGL+T C P
Sbjct: 51 LNDNNLTTLSSSSFTHMSFLKQLRLSKNPLACDCHLSWLALWLRPHIHLGLFTTCETPRQ 110
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+ G + ++ +F+C+G E C EP CP C C VDCR +GL ++P P
Sbjct: 111 LHGLKVAELQTSDFRCTGN-ENHEALCEVEPLCPAKCECTSKSVDCRNRGLTELPFTFPY 169
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSL------- 177
ELRLEQN ITE+PP+AF+ YK+L+RIDLS N I +A DAF GL++L SL
Sbjct: 170 HMMELRLEQNYITEIPPRAFSPYKKLKRIDLSNNLIETIAEDAFSGLRTLNSLRLEQNYI 229
Query: 178 -----------------TLNN------------------------NNLTYLPDGVFAELF 196
L+N NN+ L +G F L
Sbjct: 230 TEIPPRAFSPYKKLKRIDLSNNLIETIAEDAFSGLRTLNSLSLYDNNIRSLSNGTFDSLR 289
Query: 197 RLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY-TKCFAPSHIKGQNILDIPEHEFKCS 255
L+TL ++ N FICDC+L W+ +L+ P + +C P ++ + I ++ +FKC
Sbjct: 290 SLQTLHLARNPFICDCNLRWIAEYLESNPVVETSGARCARPVRMERKRITNMKSVKFKCK 349
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
++ YR G+C + CP C C + IVDC +GL
Sbjct: 350 D------AEYYR---------------TAQAGQCFIDHDCPDACTCHESIVDCSNRGLPT 388
Query: 316 VPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFAN 374
VP +P TTEL + I R+ + ++ N + L N I+ + +AF
Sbjct: 389 VPDEIPTYTTELKLNGNEISRISADGKFLHLPN------LKILDLRDNRISVIEDEAFQG 442
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L + L N ++ + ++F K LR +
Sbjct: 443 ASSLVELMLTNNKLSNVTGRSFVGLKNLRTL 473
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 137/299 (45%), Gaps = 79/299 (26%)
Query: 131 LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDG 190
L N + ++ K F LR + L NQI + +F+ LK + +L LN+NNLT L
Sbjct: 3 LSYNQLVKIDRKVFRGASLLRDLRLHNNQILCIMSGSFRPLKLIETLYLNDNNLTTLSSS 62
Query: 191 VFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEH 250
F + L+ LR+S+N CDCHLSWL WL+ + LGL+T C P + G + ++
Sbjct: 63 SFTHMSFLKQLRLSKNPLACDCHLSWLALWLRPHIHLGLFTTCETPRQLHGLKVAELQTS 122
Query: 251 EFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCRE 310
+F+C+G+ E C EP CP C C VDCR
Sbjct: 123 DFRCTGN-------------------------ENHEALCEVEPLCPAKCECTSKSVDCRN 157
Query: 311 KGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPK 370
+GL ++P P EL RLEQN ITE+PP+
Sbjct: 158 RGLTELPFTFPYHMMEL------------------------------RLEQNYITEIPPR 187
Query: 371 AFANYKRLRRI------------------------RLEQNDITELPPKAFANYKRLRRM 405
AF+ YK+L+RI RLEQN ITE+PP+AF+ YK+L+R+
Sbjct: 188 AFSPYKKLKRIDLSNNLIETIAEDAFSGLRTLNSLRLEQNYITEIPPRAFSPYKKLKRI 246
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 129/459 (28%), Positives = 191/459 (41%), Gaps = 92/459 (20%)
Query: 3 RTLN-----NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY- 56
RTLN +NN+ L +G F L L+TL ++ N FICDC+L W+ +L+ P +
Sbjct: 265 RTLNSLSLYDNNIRSLSNGTFDSLRSLQTLHLARNPFICDCNLRWIAEYLESNPVVETSG 324
Query: 57 TKCFAPSHIKGQNILDIPEHEFKCSGPVEKPT---GECAAEPSCPHPCRCADGIVDCREK 113
+C P ++ + I ++ +FKC T G+C + CP C C + IVDC +
Sbjct: 325 ARCARPVRMERKRITNMKSVKFKCKDAEYYRTAQAGQCFIDHDCPDACTCHESIVDCSNR 384
Query: 114 GLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQGLK 172
GL VP +P TTEL+L N+I+ + F + L+ +DL N+IS + +AFQG
Sbjct: 385 GLPTVPDEIPTYTTELKLNGNEISRISADGKFLHLPNLKILDLRDNRISVIEDEAFQGAS 444
Query: 173 SLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFI----------------------- 209
SL L L NN L+ + F L LRTL + N
Sbjct: 445 SLVELMLTNNKLSNVTGRSFVGLKNLRTLMLRSNRLSCITNETFTGLKAVRLLSLYDNAI 504
Query: 210 -------------------------CDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNI 244
C+CHLSWL +L + +C PS ++ I
Sbjct: 505 STIMPGSLDSMKALATLNLLGNPLNCNCHLSWLPDYLSARLIITGEPRCQEPSTLQDTPI 564
Query: 245 LDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADG 304
+ +F C G+ +NS C +CP C C+
Sbjct: 565 QTLQRDQFTCEGND------------------HNS---------CLPSLACPRECACSGT 597
Query: 305 IVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDI 364
+V C K L P +P TEL Y+ S ++++ ++ K + L N I
Sbjct: 598 VVRCSRKELTLPPRFIPTGATEL-YLDS----NQMITVPERLSSLKSL--HTLDLSMNQI 650
Query: 365 TELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLR 403
LP AFAN +L + L N I+ +P AF LR
Sbjct: 651 AMLPDFAFANMTKLSTLILSYNRISCIPDGAFMGLNSLR 689
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 140/308 (45%), Gaps = 19/308 (6%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N ++ + G + L TL + N C+CHLSWL +L + +C PS
Sbjct: 498 SLYDNAISTIMPGSLDSMKALATLNLLGNPLNCNCHLSWLPDYLSARLIITGEPRCQEPS 557
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ I + +F C G C +CP C C+ +V C K L P +P
Sbjct: 558 TLQDTPIQTLQRDQFTCEG---NDHNSCLPSLACPRECACSGTVVRCSRKELTLPPRFIP 614
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
TEL L+ N + +P + ++ K L +DLS NQI+ + AF + L++L L+ N
Sbjct: 615 TGATELYLDSNQMITVPER-LSSLKSLHTLDLSMNQIAMLPDFAFANMTKLSTLILSYNR 673
Query: 184 LTYLPDGVFAELFRLRTLRISE------NSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 237
++ +PDG F L LR L + + N CDCHL WL W+K + C P
Sbjct: 674 ISCIPDGAFMGLNSLRILXVYDIRALGGNPLYCDCHLHWLSDWVKDGFKEPGIASCADPY 733
Query: 238 HIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPH 297
++G+ +L P +F C+ E R +C P S P E G C +P +
Sbjct: 734 ILRGKLLLTAPSKKFLCT----EEPDISIRAKCD----PCLSAPCEN-EGVCLTDPIERY 784
Query: 298 PCRCADGI 305
C+C G
Sbjct: 785 RCQCPAGF 792
>gi|326928299|ref|XP_003210318.1| PREDICTED: slit homolog 3 protein-like, partial [Meleagris
gallopavo]
Length = 1282
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 138/427 (32%), Positives = 206/427 (48%), Gaps = 76/427 (17%)
Query: 28 RISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGPVEKP 87
R+ N CDCHL+WL WL++ +G +T C AP ++G + ++ + +F CSG +P
Sbjct: 1 RLHSNFLHCDCHLAWLSDWLRQRRTIGQFTFCLAPVSLRGFLVAEVQKKDFVCSGSQSEP 60
Query: 88 TGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANY 147
A+ +CP C C++ +VDCR +GL ++P LPE E+RLEQN I +PP AF Y
Sbjct: 61 PSCSASSITCPSACTCSNNVVDCRGRGLTEIPANLPEDIWEIRLEQNLIKVIPPGAFTQY 120
Query: 148 KRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPD------------------ 189
K+L+RID+SKNQIS +A DAF+GLKSL SL L N +T +P
Sbjct: 121 KKLKRIDISKNQISDIAPDAFKGLKSLISLVLYGNKITEIPQGLFDDLVSLQLLLLNANK 180
Query: 190 ------------------------------GVFAELFRLRTLRISENSFICDCHLSWLHR 219
G+FA L ++TL +++N F+CDCHL WL
Sbjct: 181 INCLRVNTFQGLHNLKLLSLYDNKLQTISKGLFAPLRSIQTLHLAQNPFVCDCHLKWLAD 240
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
+L+ P +C P + + I I +F+CSGS + RSK
Sbjct: 241 YLQDNPIETSGARCSNPRRLANKRISQIKSKKFRCSGSE-DYRSKF-------------- 285
Query: 280 CPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKV 339
TG+C + CP CRC +VDC + L ++P LPE TT+L ++ D
Sbjct: 286 ------TGKCFMDLVCPEKCRCEGTVVDCSNQKLTRLPSHLPEYTTDL----RLNDNDIS 335
Query: 340 LLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFAN 398
+L + FK+ N R L N I E+ F ++ + L +N + + + F
Sbjct: 336 VLEAI--GLFKKLPNLRKINLSNNKIKEIREGTFDGASGVQELILTENQLESVHGRMFRG 393
Query: 399 YKRLRRM 405
L+ +
Sbjct: 394 LTGLKTL 400
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 121/457 (26%), Positives = 192/457 (42%), Gaps = 100/457 (21%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C P
Sbjct: 199 SLYDNKLQTISKGLFAPLRSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSNPR 258
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K TG+C + CP CRC +VDC + L ++P
Sbjct: 259 RLANKRISQIKSKKFRCSGSEDYRSKFTGKCFMDLVCPEKCRCEGTVVDCSNQKLTRLPS 318
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLS----------------------- 156
LPE TT+LRL NDI+ L F LR+I+LS
Sbjct: 319 HLPEYTTDLRLNDNDISVLEAIGLFKKLPNLRKINLSNNKIKEIREGTFDGASGVQELIL 378
Query: 157 -KNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPD------------------------GV 191
+NQ+ V F+GL L +L L +N+++ + + G
Sbjct: 379 TENQLESVHGRMFRGLTGLKTLMLRSNSISCINNDTFAGLSSVRLLSLYDNHISTITPGA 438
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F+ L L T+ + NSF C+CHL+WL +WL++ + +C P +K I D+ +
Sbjct: 439 FSTLVSLSTINLLANSFNCNCHLAWLGKWLRKKRIVSGNPRCLKPFFLKDIPIQDVDTQD 498
Query: 252 FKCSGSSME---TRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
F C G ++ IY E
Sbjct: 499 FTCEGKKVQFSLVSMVIYLE---------------------------------------- 518
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
L VP L A LT ++ + +L +Y +N + + + L N + +P
Sbjct: 519 -GNHLTAVPKGL-SAFRHLT-LIDLSNNSISVLANYTFSNMTQLS--TLILSYNRLRCIP 573
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
AF + LR + L NDI+ +P +F + L +
Sbjct: 574 VHAFNGLRSLRVLTLHGNDISSVPEGSFNDLVSLSHL 610
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 122/253 (48%), Gaps = 16/253 (6%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N+++ + G F+ L L T+ + NSF C+CHL+WL +WL++ + +C P
Sbjct: 425 SLYDNHISTITPGAFSTLVSLSTINLLANSFNCNCHLAWLGKWLRKKRIVSGNPRCLKPF 484
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G + + ++ L VP L
Sbjct: 485 FLKDIPIQDVDTQDFTCEGKKVQFS--------------LVSMVIYLEGNHLTAVPKGLS 530
Query: 124 E--ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
T + L N I+ L F+N +L + LS N++ + V AF GL+SL LTL+
Sbjct: 531 AFRHLTLIDLSNNSISVLANYTFSNMTQLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHG 590
Query: 182 NNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKG 241
N+++ +P+G F +L L L + N CDC+L WL W+K + +C P +
Sbjct: 591 NDISSVPEGSFNDLVSLSHLALGTNPLHCDCNLRWLSEWVKAGYKEPGIARCSGPEAMVD 650
Query: 242 QNILDIPEHEFKC 254
+ +L P H F+C
Sbjct: 651 RLLLTTPTHHFQC 663
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TL+ N+++ +P+G F +L L L + N CDC+L WL W+K + +C P
Sbjct: 587 TLHGNDISSVPEGSFNDLVSLSHLALGTNPLHCDCNLRWLSEWVKAGYKEPGIARCSGPE 646
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------------KPTGECAAEPSCPHPCRCADGI 107
+ + +L P H F+C PV+ K G C+ +P + C C G
Sbjct: 647 AMVDRLLLTTPTHHFQCKEPVDISVVSKCNPCLSDPCKNNGTCSNDPVEFYQCTCPFGF 705
>gi|24371292|ref|NP_571810.1| slit homolog 2 protein precursor [Danio rerio]
gi|11526771|gb|AAG36773.1| Slit2 [Danio rerio]
gi|165993295|emb|CAP71962.1| slit2 [Danio rerio]
Length = 1512
Score = 224 bits (570), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 138/451 (30%), Positives = 209/451 (46%), Gaps = 103/451 (22%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ L F + +LRT R+ N+ +CDC+++WL WL++ PRLGLYT+C AP
Sbjct: 174 TLNNNNISRLSVASFNHMPKLRTFRLHSNNLLCDCNVAWLSDWLRQRPRLGLYTQCMAPP 233
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++G NI ++ + EF C+GP + + CP C C++ +VDCR KGL ++P LP
Sbjct: 234 SLRGHNIAEVQKKEFMCTGPQSHSS---CSVLQCPELCTCSNNVVDCRGKGLTEIPTNLP 290
Query: 124 EATTELRLEQNDI------------------------TELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I TEL +F + L + L N+
Sbjct: 291 ETITEIRLEQNSIKIIPAGAFAPYKRLRRIDLSNNQITELASDSFQGLRSLNSLVLYGNK 350
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I+++ VD+FQ L++L L+L +N L + G F+ L
Sbjct: 351 ITELPKGLFDGLFSLQLLLLNANKINCLRVDSFQDLQNLNLLSLYDNKLQTIAKGTFSSL 410
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N F+CDCHL WL +L+ P +C +P + + I I +F+CS
Sbjct: 411 RAIQTLHLAQNPFMCDCHLKWLADYLQDNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 470
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
G + RSK+ G+C A+ +CP CRC VDC + L K
Sbjct: 471 GVE-DYRSKL--------------------GGDCFADLACPEKCRCEGTTVDCSGQKLTK 509
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKA-FAN 374
+P +P+ T EL RL N+ T L F
Sbjct: 510 IPDHIPQYTAEL------------------------------RLNNNEFTVLEATGIFKK 539
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+LR+I L N IT++ F + +
Sbjct: 540 LPQLRKINLSNNKITDIEEGTFEGASGVNEL 570
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/294 (36%), Positives = 147/294 (50%), Gaps = 60/294 (20%)
Query: 115 LNKVPILLPEATTEL---RLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL TT+L L +N I +P KAF ++ + L NQIS + AF+ L
Sbjct: 108 LQVLPELLFLGTTKLFRLDLSENQIQGIPRKAFRGSTEIKNLQLDYNQISCIEDGAFRAL 167
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
L LTLNNNN++ L F + +LRT R+ N+ +CDC+++WL WL++ PRLGLYT
Sbjct: 168 GDLEVLTLNNNNISRLSVASFNHMPKLRTFRLHSNNLLCDCNVAWLSDWLRQRPRLGLYT 227
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C AP ++G NI ++ + EF C+G ++SC V +
Sbjct: 228 QCMAPPSLRGHNIAEVQKKEFMCTGP-----------------QSHSSCSVLQ------- 263
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
CP C C++ +VDCR KGL ++P LPE TE+
Sbjct: 264 ---CPELCTCSNNVVDCRGKGLTEIPTNLPETITEI------------------------ 296
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AFA YKRLRRI L N ITEL +F + L +
Sbjct: 297 ------RLEQNSIKIIPAGAFAPYKRLRRIDLSNNQITELASDSFQGLRSLNSL 344
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 133/472 (28%), Positives = 196/472 (41%), Gaps = 97/472 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 393 SLYDNKLQTIAKGTFSSLRAIQTLHLAQNPFMCDCHLKWLADYLQDNPIETSGARCTSPR 452
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K G+C A+ +CP CRC VDC + L K+P
Sbjct: 453 RLANKRIGQIKSKKFRCSGVEDYRSKLGGDCFADLACPEKCRCEGTTVDCSGQKLTKIPD 512
Query: 121 LLPEATTELRL-------------------------EQNDITELPPKAF----------- 144
+P+ T ELRL N IT++ F
Sbjct: 513 HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGTFEGASGVNELIL 572
Query: 145 -------------ANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGV 191
LR + L N+IS V +F GL S+ L+L +N +T + G
Sbjct: 573 TSNRLEGVHYSMLKGLGGLRTLMLRSNRISCVNNGSFTGLSSVRLLSLYDNLITSMSPGA 632
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L TL + N F C+CHL+WL WL++ + +C +P +K I D+ +
Sbjct: 633 FDTLHSLSTLNLLANPFNCNCHLAWLGEWLRKKRIVTGNPRCQSPYFLKEIPIQDVAVQD 692
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C + E NSC P C AE C C D +V C K
Sbjct: 693 FACEEGNDE-----------------NSC---SPLARCPAE------CSCLDTVVRCSNK 726
Query: 312 GLNKVPILLPEATTELTYM---------VSIDRVDKVLLYSYISNNFKRWTNRSRR---- 358
GL +P +P TEL Y+ + + + L +N +N S
Sbjct: 727 GLKVLPKGIPRDVTEL-YLDGNEFTQVPLELSNYKHLTLIDLSNNQISTLSNHSFSNMSE 785
Query: 359 -----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P KAF K LR + L NDI +P AF + L +
Sbjct: 786 LLTLILSYNRLRCIPAKAFDGLKSLRLLSLHGNDIAVIPDGAFKDLSSLSHL 837
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 137/277 (49%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+CHL+WL WL++ + +C +P
Sbjct: 619 SLYDNLITSMSPGAFDTLHSLSTLNLLANPFNCNCHLAWLGEWLRKKRIVTGNPRCQSPY 678
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C ++ + C+ CP C C D +V C KGL +P +P
Sbjct: 679 FLKEIPIQDVAVQDFACEEGNDENS--CSPLARCPAECSCLDTVVRCSNKGLKVLPKGIP 736
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVA------------------- 164
TEL L+ N+ T++P + +NYK L IDLS NQIS ++
Sbjct: 737 RDVTELYLDGNEFTQVPLE-LSNYKHLTLIDLSNNQISTLSNHSFSNMSELLTLILSYNR 795
Query: 165 -----VDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
AF GLKSL L+L+ N++ +PDG F +L L L + N CDCH+ WL
Sbjct: 796 LRCIPAKAFDGLKSLRLLSLHGNDIAVIPDGAFKDLSSLSHLALGANPLYCDCHMQWLSD 855
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C+G
Sbjct: 856 WVKSGYKEPGIARCTGPGDMTDKLLLTTPSKKFTCTG 892
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 61/117 (52%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A SCP C C+ VDC + L VP +P L L N++T++ FA K LR
Sbjct: 16 AGAQSCPSQCSCSGTAVDCHGQSLRSVPRNIPRNVERLDLNANNLTKITKADFAGLKNLR 75
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+IS + AFQ L+ L L LN NNL LP+ +F +L L +SEN
Sbjct: 76 VLQLMENKISSIERGAFQDLQELERLRLNRNNLQVLPELLFLGTTKLFRLDLSENQI 132
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNF 349
A SCP C C+ VDC + L VP +P L ++ + + K+ +F
Sbjct: 16 AGAQSCPSQCSCSGTAVDCHGQSLRSVPRNIPRNVERLD--LNANNLTKI-----TKADF 68
Query: 350 KRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R +L +N I+ + AF + + L R+RL +N++ LP F +L R+
Sbjct: 69 AGLKNLRVLQLMENKISSIERGAFQDLQELERLRLNRNNLQVLPELLFLGTTKLFRL 125
>gi|432846698|ref|XP_004065900.1| PREDICTED: slit homolog 2 protein-like [Oryzias latipes]
Length = 1564
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 141/451 (31%), Positives = 208/451 (46%), Gaps = 93/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ L F + +LRT R+ N+ CDCH++WL WL++ PRLGLYT+C +P
Sbjct: 189 TLNNNNISRLSVASFNHMPKLRTFRLHSNNLQCDCHVAWLSEWLRQRPRLGLYTQCMSPP 248
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + EF C+G + + + CP C C++ IVDCR KGL ++P LP
Sbjct: 249 HLRGHNVAEVQKKEFVCTGH-QSSSSSSCSVLQCPESCTCSNNIVDCRGKGLTEIPTNLP 307
Query: 124 EATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLSKNQ 159
E TE+RLEQN I+EL AF + L + L N+
Sbjct: 308 ETITEIRLEQNAIKVIPAGAFSPYKRLRRIDLSNNQISELASDAFQGLRSLNSLVLYGNK 367
Query: 160 ISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I++++ VDAFQ L +L L+L +N L + G F+ L
Sbjct: 368 ITEISKGLFEGLFSLQLLLLNANKIACLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSSL 427
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N FICDCHL WL +L+ P +C +P + + I I +F+CS
Sbjct: 428 RAIQTLHLAQNPFICDCHLKWLADYLQDNPIETSGARCTSPRRLANKRIGQIKSKKFRCS 487
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
RE+ F P K G+C A+ +CP CRC VDC + L K
Sbjct: 488 A----------REQ---YFIPGTEDYRSKLGGDCFADLACPEKCRCEGTTVDCSNQKLTK 534
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKA-FAN 374
+P +P+ T EL RL N+ T L F
Sbjct: 535 IPDHIPQYTAEL------------------------------RLNNNEFTVLEATGIFKK 564
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
LR+I L N IT++ F + +
Sbjct: 565 LPHLRKINLSNNRITDIEEGTFEGASGVNEL 595
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 136/481 (28%), Positives = 199/481 (41%), Gaps = 107/481 (22%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++TL +++N FICDCHL WL +L+ P +C +P
Sbjct: 410 SLYDNKLQTIAKGTFSSLRAIQTLHLAQNPFICDCHLKWLADYLQDNPIETSGARCTSPR 469
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K G+C A+ +CP CRC VDC
Sbjct: 470 RLANKRIGQIKSKKFRCSAREQYFIPGTEDYRSKLGGDCFADLACPEKCRCEGTTVDCSN 529
Query: 113 KGLNKVPILLPEATTELRL-------------------------EQNDITELPPKAF--- 144
+ L K+P +P+ T ELRL N IT++ F
Sbjct: 530 QKLTKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPHLRKINLSNNRITDIEEGTFEGA 589
Query: 145 ---------------------ANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
LR + L N+IS V+ +F GL S+ L+L +N
Sbjct: 590 SGVNELILTSNKLENIHHSMLKGLGGLRTLMLRSNRISCVSNSSFVGLSSVRLLSLYDNQ 649
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N F C+CHL+WL WL+R + +C P +K
Sbjct: 650 VTSMTPGAFDTLHSLSTLNLLANPFNCNCHLAWLGDWLRRKRIVTGNPRCQNPYFLKEIP 709
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCA 302
I D+ +F C + E NSC PV + CP C C
Sbjct: 710 IQDVAVQDFACEDGNNE-----------------NSCSPVMR----------CPAECSCL 742
Query: 303 DGIVDCREKGLNKVPILLPEATTELTYM---------VSIDRVDKVLLYSYISNNFKRWT 353
D +V C KGL +P LP+ TTEL Y+ V + + L +N +
Sbjct: 743 DTVVRCSNKGLTTLPKGLPKETTEL-YLDGNHFTQVPVELSNYKHLTLIDLSNNQISTLS 801
Query: 354 NRSRR---------LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRR 404
N S L N + +P +AF K LR + L NDI+ +P AF + L
Sbjct: 802 NHSLSNMSELLTLILSYNRLRCIPVRAFDGLKSLRLLSLHGNDISLIPEGAFKDLSSLSH 861
Query: 405 M 405
+
Sbjct: 862 L 862
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 143/294 (48%), Gaps = 58/294 (19%)
Query: 115 LNKVPILLPEATTELR---LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L P LL TT+L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 123 LAVFPELLFLGTTKLHRLDLSENQIQGVPRKAFRGAVEIKNLQLDYNHISCIEDGAFRAL 182
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ L F + +LRT R+ N+ CDCH++WL WL++ PRLGLYT
Sbjct: 183 RDLEVLTLNNNNISRLSVASFNHMPKLRTFRLHSNNLQCDCHVAWLSEWLRQRPRLGLYT 242
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C +P H++G N+ ++ + EF C+G + S +
Sbjct: 243 QCMSPPHLRGHNVAEVQKKEFVCTGHQSSSSSSCSVLQ---------------------- 280
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
CP C C++ IVDCR KGL ++P LPE TE+
Sbjct: 281 ---CPESCTCSNNIVDCRGKGLTEIPTNLPETITEI------------------------ 313
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF+ YKRLRRI L N I+EL AF + L +
Sbjct: 314 ------RLEQNAIKVIPAGAFSPYKRLRRIDLSNNQISELASDAFQGLRSLNSL 361
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 138/277 (49%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+CHL+WL WL+R + +C P
Sbjct: 644 SLYDNQVTSMTPGAFDTLHSLSTLNLLANPFNCNCHLAWLGDWLRRKRIVTGNPRCQNPY 703
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P LP
Sbjct: 704 FLKEIPIQDVAVQDFACEDGNNENS--CSPVMRCPAECSCLDTVVRCSNKGLTTLPKGLP 761
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVA------------------- 164
+ TTEL L+ N T++P + +NYK L IDLS NQIS ++
Sbjct: 762 KETTELYLDGNHFTQVPVE-LSNYKHLTLIDLSNNQISTLSNHSLSNMSELLTLILSYNR 820
Query: 165 -----VDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
V AF GLKSL L+L+ N+++ +P+G F +L L L + N CDCH+ WL
Sbjct: 821 LRCIPVRAFDGLKSLRLLSLHGNDISLIPEGAFKDLSSLSHLALGANPLYCDCHMQWLSD 880
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C+G
Sbjct: 881 WVKSGYKEPGIARCAGPGDMTDKLLLTTPSKKFTCTG 917
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 62/116 (53%), Gaps = 1/116 (0%)
Query: 93 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRR 152
A+P CP C C VDC +GL VP +P T L L N++T++ FA + LR
Sbjct: 33 AQP-CPTQCSCTGTTVDCHGQGLRSVPRNIPRNTERLDLNANNLTKITKADFAGLRHLRV 91
Query: 153 IDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L +N+I+ + AFQ LK L L LN NNL P+ +F +L L +SEN
Sbjct: 92 LQLMENKITTIERGAFQDLKELERLRLNRNNLAVFPELLFLGTTKLHRLDLSENQI 147
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 51/119 (42%), Gaps = 15/119 (12%)
Query: 291 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTY----MVSIDRVDKVLLYSYIS 346
A+P CP C C VDC +GL VP +P T L + I + D L
Sbjct: 33 AQP-CPTQCSCTGTTVDCHGQGLRSVPRNIPRNTERLDLNANNLTKITKADFAGLRHL-- 89
Query: 347 NNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N IT + AF + K L R+RL +N++ P F +L R+
Sbjct: 90 --------RVLQLMENKITTIERGAFQDLKELERLRLNRNNLAVFPELLFLGTTKLHRL 140
>gi|291404559|ref|XP_002718645.1| PREDICTED: slit homolog 1 protein-like [Oryctolagus cuniculus]
Length = 1452
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 140/454 (30%), Positives = 219/454 (48%), Gaps = 74/454 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 183 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCAGPA 242
Query: 64 HIKGQNILDIPEHEFKCSGPVEK---PTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
++G N+ ++ ++EF CSG E PT ++ SCP C C++GIVDCR KGL +P
Sbjct: 243 SLRGLNVAEVQKNEFSCSGQGEAGRVPTCTLSSG-SCPAMCTCSNGIVDCRGKGLTAIPA 301
Query: 121 LLPEATTELRLE------------------------QNDITELPPKAFANYKRLRRIDLS 156
LPE TE+RLE N I+E+ P AF + L + L
Sbjct: 302 NLPETMTEIRLELNGIQSIPPGAFSPYRKLRRIDLSNNHISEIAPDAFQGLRSLNSLVLY 361
Query: 157 KNQISK------------------------VAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
N+I+ + DAFQ L++L+ L+L +N + L G F
Sbjct: 362 GNKITDLPRGVFSGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLARGTF 421
Query: 193 AELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
L ++TL +++N FICDC L WL +L+ P +C +P + + I I +F
Sbjct: 422 TSLRAIQTLHLAQNPFICDCSLKWLADFLRTNPIETSGARCASPRRLANKRIGQIKSKKF 481
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CS Y + D+ NS EC ++ CPH CRC +V+C
Sbjct: 482 RCSAKEQ------YFIPGTEDYQ-LNS--------ECNSDVVCPHKCRCEASVVECSSLK 526
Query: 313 LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPPKA 371
L K+P +P++T EL ++ + +L + + FK+ T+ + L N ++E+ A
Sbjct: 527 LTKIPERIPQSTAEL----RLNNNEIAILEA--TGMFKKLTHLKKINLSNNKVSEIEDGA 580
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + + L N + + F LR +
Sbjct: 581 FEGAASVSELHLTANQLESIRSGMFRGLDGLRTL 614
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 151/294 (51%), Gaps = 55/294 (18%)
Query: 115 LNKVPILL---PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L+ +P LL +A + L L +N I +P KAF L+ + L KNQIS + AF+ L
Sbjct: 117 LHTLPELLFQNNQALSRLDLSENAIQSIPRKAFRGATDLKNLQLDKNQISCIEEGAFRAL 176
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T
Sbjct: 177 RGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFT 236
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C P+ ++G N+ ++ ++EF CSG R +C + +
Sbjct: 237 QCAGPASLRGLNVAEVQKNEFSCSGQGEAGRVP--------------TCTL--------S 274
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++GIVDCR KGL +P LPE TE+
Sbjct: 275 SGSCPAMCTCSNGIVDCRGKGLTAIPANLPETMTEI------------------------ 310
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLE N I +PP AF+ Y++LRRI L N I+E+ P AF + L +
Sbjct: 311 ------RLELNGIQSIPPGAFSPYRKLRRIDLSNNHISEIAPDAFQGLRSLNSL 358
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 187/452 (41%), Gaps = 93/452 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC L WL +L+ P +C +P
Sbjct: 407 SLYDNKIQSLARGTFTSLRAIQTLHLAQNPFICDCSLKWLADFLRTNPIETSGARCASPR 466
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + EC ++ CPH CRC +V+C
Sbjct: 467 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVVCPHKCRCEASVVECSSLK 526
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L K+P +P++T ELRL N+I L F L++I+LS N++S++ AF+G
Sbjct: 527 LTKIPERIPQSTAELRLNNNEIAILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAAS 586
Query: 171 ---------------------LKSLTSLTLNN------------------------NNLT 185
L L +L L N N++T
Sbjct: 587 VSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHIT 646
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F CDC L+WL WL++ + +C P ++ +
Sbjct: 647 TIAPGAFDTLQALSTLNLLANPFNCDCQLAWLGDWLRKRRVVTGNPRCQNPDFLRQIPLQ 706
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E G C P CP C C D +
Sbjct: 707 DVAFPDFRCEEGQEE--------------------------GGCLPRPQCPQECACLDTV 740
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISN-NFKRWTNRSRRLEQNDI 364
V C K L +P+ +P+ TEL +D + +S F + + L N I
Sbjct: 741 VRCSNKHLRALPVGIPKNVTELY----LDGNQFTQVPGQLSTFKFLQLVD----LSNNKI 792
Query: 365 TELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
+ L +F N +L + L N + +PP AF
Sbjct: 793 SSLSNSSFTNMSQLTTLILSYNALQCIPPLAF 824
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 137/277 (49%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N++T + G F L L TL + N F CDC L+WL WL++ + +C P
Sbjct: 639 SLYDNHITTIAPGAFDTLQALSTLNLLANPFNCDCQLAWLGDWLRKRRVVTGNPRCQNPD 698
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ G C P CP C C D +V C K L +P+ +P
Sbjct: 699 FLRQIPLQDVAFPDFRCEEGQEE--GGCLPRPQCPQECACLDTVVRCSNKHLRALPVGIP 756
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TEL L+ N T++P + + +K L+ +DLS N+IS ++ +F + LT+L L+ N
Sbjct: 757 KNVTELYLDGNQFTQVPGQ-LSTFKFLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 815
Query: 184 LTYLP------------------------DGVFAELFRLRTLRISENSFICDCHLSWLHR 219
L +P +G F ++ L L I N CDCHL WL
Sbjct: 816 LQCIPPLAFQGLRSLRLLSLHGNDVATLQEGTFTDVTSLSHLAIGANPLYCDCHLRWLSS 875
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P H++G+ +L P +F+C G
Sbjct: 876 WVKTGYKEPGIARCAGPPHMEGKLLLTTPAKKFECQG 912
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 59/113 (52%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC GL VP +P +T L L N+IT + FA K+LR + L
Sbjct: 29 ACPALCTCSGTTVDCHGTGLQAVPKNIPRSTERLELNGNNITRIHKNDFAGLKQLRVLQL 88
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+NQI V AF +K L L LN N L LP+ +F L L +SEN+
Sbjct: 89 MENQIGAVERGAFDDMKELERLRLNRNQLHTLPELLFQNNQALSRLDLSENAI 141
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV-SIDRVDKVLLYSYISNNFKRW 352
+CP C C+ VDC GL VP +P +T L +I R+ K N+F
Sbjct: 29 ACPALCTCSGTTVDCHGTGLQAVPKNIPRSTERLELNGNNITRIHK--------NDFAGL 80
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N I + AF + K L R+RL +N + LP F N + L R+
Sbjct: 81 KQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHTLPELLFQNNQALSRL 134
>gi|390473277|ref|XP_002756692.2| PREDICTED: LOW QUALITY PROTEIN: slit homolog 1 protein [Callithrix
jacchus]
Length = 2418
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 149/477 (31%), Positives = 218/477 (45%), Gaps = 109/477 (22%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 95 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 154
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++G N+ ++ + EF C G + + SCP C C++GIVDCR KGL +P LP
Sbjct: 155 SLRGLNVAEVQKSEFSCPGEAGRVPTCTLSSGSCPAMCTCSNGIVDCRGKGLTAIPANLP 214
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E TE+RLE N I +PP AF+ Y++LRRIDLS NQI+++A DAFQGL+SL SL L N
Sbjct: 215 ETMTEIRLELNSIKSIPPGAFSRYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNK 274
Query: 184 LTYLPDGVFA------------------------------------------------EL 195
+T LP GVF L
Sbjct: 275 ITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSL 334
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N FICDC+L WL +L+ P +C +P + + I I +F+CS
Sbjct: 335 RAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANKRIGQIKSKKFRCS 394
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
F P S V +P R LN
Sbjct: 395 AKEQY-------------FIPGRSGGVPRPAW---------------------RGWRLNN 420
Query: 316 VPILLPEATT---ELTYM----VSIDRVDKV-------------------LLYSYISNNF 349
I + EAT +LT++ +S ++V ++ L S S F
Sbjct: 421 NEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMF 480
Query: 350 KRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ R+ L N I+ + +F + +R + L N IT + P AF + L +
Sbjct: 481 RGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTL 537
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 146/294 (49%), Gaps = 57/294 (19%)
Query: 115 LNKVPILL---PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L+ +P LL +A + L L +N I +P KAF L+ + L KNQIS + AF+ L
Sbjct: 29 LHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRAL 88
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T
Sbjct: 89 RGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFT 148
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C P+ ++G N+ ++ + EF C G + + +
Sbjct: 149 QCSGPASLRGLNVAEVQKSEFSCPGEAGRVPTCTL------------------------S 184
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++GIVDCR KGL +P LPE TE+
Sbjct: 185 SGSCPAMCTCSNGIVDCRGKGLTAIPANLPETMTEI------------------------ 220
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLE N I +PP AF+ Y++LRRI L N I E+ P AF + L +
Sbjct: 221 ------RLELNSIKSIPPGAFSRYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSL 268
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 514 SLYDNQITTVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPD 573
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ G C P CP C C D +V C K L +P +P
Sbjct: 574 FLRQIPLQDVAFPDFRCEEGQEE--GGCLPRPQCPQECACLDTVVRCSNKHLRALPRGVP 631
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TEL L+ N T +P + F +K L+ +DLS N+IS ++ +F + LT+L L+ N
Sbjct: 632 KNVTELYLDGNQFTLVPGQLFT-FKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 690
Query: 184 LTYLP------------------------DGVFAELFRLRTLRISENSFICDCHLSWLHR 219
L +P +G+FA++ L L I N CDCHL WL
Sbjct: 691 LQCIPPLAFQGLRSLRLLSLHGNDISTLREGIFADVTSLSHLAIGANPLYCDCHLRWLSS 750
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 751 WVKTGYKEPGIARCAGPPDMEGKLLLTTPAKKFECQG 787
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 172/416 (41%), Gaps = 56/416 (13%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 317 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPR 376
Query: 64 HIKGQNILDIPEHEFKC-----------SGPVEKPTGEC----AAEPSCPHPCRCADGIV 108
+ + I I +F+C SG V +P E S +
Sbjct: 377 RLANKRIGQIKSKKFRCSAKEQYFIPGRSGGVPRPAWRGWRLNNNEISILEATGMFKKLT 436
Query: 109 DCREKGL--NKVPILLPEA------TTELRLEQNDITELPPKAFANYKRLRRIDLSKNQI 160
++ L NKV + A +EL L N + + F LR + L N+I
Sbjct: 437 HLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRI 496
Query: 161 SKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW 220
S + D+F GL+++ L+L +N +T + G F L L TL + N F C+C L+WL W
Sbjct: 497 SCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGDW 556
Query: 221 LKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC 280
L++ + +C P ++ + D+ +F+C E
Sbjct: 557 LRKRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRCEEGQEE-------------------- 596
Query: 281 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL 340
G C P CP C C D +V C K L +P +P+ TEL +D L
Sbjct: 597 ------GGCLPRPQCPQECACLDTVVRCSNKHLRALPRGVPKNVTELY----LDGNQFTL 646
Query: 341 LYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
+ + F + L N I+ L +F N +L + L N + +PP AF
Sbjct: 647 VPGQL---FTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAF 699
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 106/221 (47%), Gaps = 13/221 (5%)
Query: 3 RTLNNNNLTYLPDGVF------AELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY 56
+ L+ +NL+ G F L ++ L +++N FIC+C+L WL +L
Sbjct: 1419 KVLHESNLSRQSLGTFDAQHDLGPLGAIQMLHLAQNPFICNCNLKWLAEFLHTNSTEMTG 1478
Query: 57 TKCFAPSHIKGQNILDIPEHEFKCSG------PVEKPTGECAAEPSCPHPCRCADGIVDC 110
+ +P H+ ++I I +F CS P + EC ++ CPH C C V+C
Sbjct: 1479 ARSASPQHLINKHIGQIKSKKFXCSAKEKYFIPGREXNSECNSDVICPHKCLCEASTVEC 1538
Query: 111 REKGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQ 169
L K+P +P++T EL L +I+ L F L++I+LS N++S++ F+
Sbjct: 1539 SSLKLAKIPKCIPQSTAELXLNNKEISILEATGMFKKLTHLKKINLSNNKVSEIEDGVFE 1598
Query: 170 GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFIC 210
G S+ L N L + +F +L LRTL + NS C
Sbjct: 1599 GAASVNEQHLTANQLESIXSSMFWDLDGLRTLMLLNNSISC 1639
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 106/263 (40%), Gaps = 42/263 (15%)
Query: 160 ISKVAVDAFQGL----------KSLTSLTLNNNNLTYLPDGVF------AELFRLRTLRI 203
I+KV D F G+ + L S L+ +NL+ G F L ++ L +
Sbjct: 1393 IAKVESDGF-GMSNMQDSIGFWQELDSKVLHESNLSRQSLGTFDAQHDLGPLGAIQMLHL 1451
Query: 204 SENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
++N FIC+C+L WL +L + +P H+ ++I I +F CS +
Sbjct: 1452 AQNPFICNCNLKWLAEFLHTNSTEMTGARSASPQHLINKHIGQIKSKKFXCS-----AKE 1506
Query: 264 KIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEA 323
K + P + EC ++ CPH C C V+C L K+P +P++
Sbjct: 1507 KYFI-------------PGREXNSECNSDVICPHKCLCEASTVECSSLKLAKIPKCIPQS 1553
Query: 324 TTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPPKAFANYKRLRRIR 382
T EL +K + + FK+ T+ + L N ++E+ F +
Sbjct: 1554 TAELXLN------NKEISILEATGMFKKLTHLKKINLSNNKVSEIEDGVFEGAASVNEQH 1607
Query: 383 LEQNDITELPPKAFANYKRLRRM 405
L N + + F + LR +
Sbjct: 1608 LTANQLESIXSSMFWDLDGLRTL 1630
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%)
Query: 15 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 74
+G+ ++ L L I N CDCHL WL W+K + C P ++G+ +L +P
Sbjct: 1735 EGIITDMTYLSHLAIGANPLYCDCHLHWLSSWVKTGYKEPGIAHCAGPPDVEGKLLLTMP 1794
Query: 75 EHEFKCSGP 83
+F+C GP
Sbjct: 1795 AKKFECQGP 1803
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L L + N F C+C L+WL WL+++ + C P
Sbjct: 1655 SLYDNQITTVFPGAFDTLQSLSMLNLLANPFNCNCQLAWLEDWLQKHKIMMGNPHCQNPD 1714
Query: 64 HIKGQNILDIPEHEF 78
++ + D+ +F
Sbjct: 1715 FLQQIPLQDMAFPDF 1729
>gi|432903724|ref|XP_004077199.1| PREDICTED: slit homolog 1 protein-like isoform 1 [Oryzias latipes]
Length = 1525
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 139/444 (31%), Positives = 207/444 (46%), Gaps = 104/444 (23%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ +P F + +LRT R+ N+ CDCHL+WL +WL++ P +GL+T+C PS
Sbjct: 189 TLNNNNISSIPVSSFNHMPKLRTFRLHSNNLNCDCHLAWLAQWLRQRPTIGLFTQCTVPS 248
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGE-CA-AEPSCPHPCRCADGIVDCREKGLNKVPIL 121
+KG N+ ++ +HEF CSG E + + C+ SCP C C++ IVDCR KGL +P
Sbjct: 249 ELKGLNVAEVQKHEFTCSGHQESSSLQPCSIGGGSCPAMCTCSNNIVDCRGKGLTAIPAN 308
Query: 122 LPEATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLSK 157
LP+ E+RLEQN I+E+ P AF + L + L
Sbjct: 309 LPDNMAEIRLEQNGIKSVPPGAFSSYKKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYG 368
Query: 158 NQISK------------------------VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFA 193
N+I+ + + FQ L++L+ L+L +N + L G F
Sbjct: 369 NKITDLPKGVFDGLYALQLLLLNANKIHCIRANTFQDLQNLSLLSLYDNKIQTLAKGTFT 428
Query: 194 ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFK 253
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I +F+
Sbjct: 429 SLRAIQTLHLAQNPFICDCNLKWLADYLRSNPIETSGARCASPRRLANKRIGQIKSKKFR 488
Query: 254 CSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL 313
CSG T + C++D P CP CRC +VDC L
Sbjct: 489 CSG----TEDVRLNDACNSD-------------------PVCPPKCRCESNVVDCSNLKL 525
Query: 314 NKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPK-AF 372
K+P +P +T+EL RL N+IT L AF
Sbjct: 526 TKIPEHIPSSTSEL------------------------------RLNNNEITSLDANGAF 555
Query: 373 ANYKRLRRIRLEQNDITELPPKAF 396
N +L++I L N ITE+ F
Sbjct: 556 KNLAQLKKINLSNNKITEIEDGTF 579
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 154/294 (52%), Gaps = 55/294 (18%)
Query: 115 LNKVPILLPE---ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L ++P LL + A + L L +N I +P KAF ++ + L KN IS + AF+ +
Sbjct: 123 LQQLPELLFQKNPALSRLDLSENFIQSIPRKAFRGATDIKNLQLDKNHISCIEDGAFRAM 182
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ +P F + +LRT R+ N+ CDCHL+WL +WL++ P +GL+T
Sbjct: 183 RGLEVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNNLNCDCHLAWLAQWLRQRPTIGLFT 242
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C PS +KG N+ ++ +HEF CSG ++E S+ P C +
Sbjct: 243 QCTVPSELKGLNVAEVQKHEFTCSG---------HQE--SSSLQP---CSI--------G 280
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++ IVDCR KGL +P LP+ E+
Sbjct: 281 GGSCPAMCTCSNNIVDCRGKGLTAIPANLPDNMAEI------------------------ 316
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +PP AF++YK+LRRI L N I+E+ P AF + L +
Sbjct: 317 ------RLEQNGIKSVPPGAFSSYKKLRRIDLSNNQISEIAPDAFQGLRSLNSL 364
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 123/445 (27%), Positives = 187/445 (42%), Gaps = 83/445 (18%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 413 SLYDNKIQTLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADYLRSNPIETSGARCASPR 472
Query: 64 HIKGQNILDIPEHEFKCSGPVE-KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILL 122
+ + I I +F+CSG + + C ++P CP CRC +VDC L K+P +
Sbjct: 473 RLANKRIGQIKSKKFRCSGTEDVRLNDACNSDPVCPPKCRCESNVVDCSNLKLTKIPEHI 532
Query: 123 PEATTELRL-------------------------EQNDITELPPKAFA------------ 145
P +T+ELRL N ITE+ F
Sbjct: 533 PSSTSELRLNNNEITSLDANGAFKNLAQLKKINLSNNKITEIEDGTFEGASAVIELHLTA 592
Query: 146 ------------NYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFA 193
+ LR + L N+IS V D+F GL ++ L+L +N LT + G F
Sbjct: 593 NQIDSVRSGMFRGLEGLRMLMLRNNKISCVHNDSFTGLHNVRLLSLYDNQLTTITPGAFD 652
Query: 194 ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFK 253
L L TL + NSF CDC L+WL WL+ + +C P+ +K + D+ +F+
Sbjct: 653 TLQTLSTLNLLANSFNCDCRLAWLGDWLRSRKIVTGNPRCQRPAFLKEIPLQDVALPDFR 712
Query: 254 CSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL 313
C E+ C P CP C C + +V C K L
Sbjct: 713 CDEGQEES--------------------------SCIPRPQCPSECTCLETVVRCSNKHL 746
Query: 314 NKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFA 373
+ +P +P TEL +D ++ +S FK + L N I L +FA
Sbjct: 747 HSLPRGIPRNVTELY----LDGNQFSIVPKELS-TFKYL--QLVDLSNNKINSLTNSSFA 799
Query: 374 NYKRLRRIRLEQNDITELPPKAFAN 398
N +L + L N + +P AF+
Sbjct: 800 NMSQLTTLILSYNSLRCIPKMAFSG 824
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N LT + G F L L TL + NSF CDC L+WL WL+ + +C P+
Sbjct: 637 SLYDNQLTTITPGAFDTLQTLSTLNLLANSFNCDCRLAWLGDWLRSRKIVTGNPRCQRPA 696
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K + D+ +F+C E+ + C P CP C C + +V C K L+ +P +P
Sbjct: 697 FLKEIPLQDVALPDFRCDEGQEESS--CIPRPQCPSECTCLETVVRCSNKHLHSLPRGIP 754
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
TEL L+ N + + PK + +K L+ +DLS N+I+ + +F + LT+L L+ N+
Sbjct: 755 RNVTELYLDGNQFS-IVPKELSTFKYLQLVDLSNNKINSLTNSSFANMSQLTTLILSYNS 813
Query: 184 L------------------------TYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
L + LPDG+F ++ L L I N CDC L WL
Sbjct: 814 LRCIPKMAFSGLHSLRLLSLHGNEISELPDGIFNDVASLSHLAIGANPLHCDCRLRWLSD 873
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 874 WVKTGYKEPGIARCAGPQGLEGKLLLTTPAKKFECHG 910
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 57/111 (51%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC GL +P +P T L L N++T + F K +R + L
Sbjct: 35 ACPALCTCSGVTVDCHGLGLKTMPRNIPRNTERLELNGNNLTRITKSDFTGLKYVRVLQL 94
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
+NQI+ V AF +K L L LN N L LP+ +F + L L +SEN
Sbjct: 95 MENQITVVERGAFDDMKELERLRLNRNQLQQLPELLFQKNPALSRLDLSEN 145
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ VDC GL +P +P T L ++ + + ++ + + R
Sbjct: 35 ACPALCTCSGVTVDCHGLGLKTMPRNIPRNTERLE--LNGNNLTRITKSDFTGLKYVRVL 92
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+L +N IT + AF + K L R+RL +N + +LP F L R+
Sbjct: 93 ----QLMENQITVVERGAFDDMKELERLRLNRNQLQQLPELLFQKNPALSRL 140
>gi|391330789|ref|XP_003739836.1| PREDICTED: protein slit-like [Metaseiulus occidentalis]
Length = 1526
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 144/464 (31%), Positives = 217/464 (46%), Gaps = 92/464 (19%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TL+ NNLT + +F L +LR LR+SEN CDCHLSWL WL+ PRLGLYT C +P
Sbjct: 273 TLSRNNLTRISRYLFDGLKKLRVLRLSENPLSCDCHLSWLSGWLRSNPRLGLYTTCHSPF 332
Query: 64 HIKGQNILDIPEHEFKCSG-----PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKV 118
++KG+ + ++ E +FKC+G E P C E +CP PC C +VDCR+KGL ++
Sbjct: 333 YLKGKPVAELREDDFKCNGLDLMLADEAPV--CNPEATCPTPCTCKGNVVDCRDKGLTEL 390
Query: 119 PILLPEATTELRLEQNDITEL------------------------PPKAFANYK------ 148
P P+ TTE+ L+ N ITEL P AF +
Sbjct: 391 PHFFPDDTTEINLQNNRITELPARRFSGLRVLRKIDLTGNQISKIDPDAFEGLRTLTILA 450
Query: 149 ------------------RLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDG 190
L+ + L++NQ+ + DAF+ L++L L+L +N + L D
Sbjct: 451 LYRNNLTDLPSGVFEGLTSLQMLLLNRNQLECIRKDAFRDLQNLNVLSLYDNQIQSLADS 510
Query: 191 VFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-----RLGLY---TKCFAPSHIKGQ 242
FA L ++T+ + +N ICDC+L W+ RW+ + + G+ +C +P + G+
Sbjct: 511 TFAPLTNIQTVHLGKNPLICDCNLRWMARWIASFQADEGDQSGVERSDARCDSPKRVAGK 570
Query: 243 NILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCA 302
+ + E +FKC G+ E R+K GEC + CP C C
Sbjct: 571 RLTQLTESKFKCRGAE-EYRTKY--------------------AGECRVDSGCPSGCVCE 609
Query: 303 DGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQ 361
IVDC KGL +P LP T+EL R+ + + + FK N + L
Sbjct: 610 GTIVDCSRKGLRTIPGDLPMYTSEL-------RLTANAIENVHTEAFKNLPNLLKIDLRD 662
Query: 362 NDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N I + AF + + L N++ + PK A ++ +
Sbjct: 663 NQIKNIEDNAFYGAVHVTDLLLSDNELKHIRPKMLAGLSSIKNL 706
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/442 (28%), Positives = 194/442 (43%), Gaps = 79/442 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-----RLGLY-- 56
+L +N + L D FA L ++T+ + +N ICDC+L W+ RW+ + + G+
Sbjct: 498 SLYDNQIQSLADSTFAPLTNIQTVHLGKNPLICDCNLRWMARWIASFQADEGDQSGVERS 557
Query: 57 -TKCFAPSHIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCRE 112
+C +P + G+ + + E +FKC G E K GEC + CP C C IVDC
Sbjct: 558 DARCDSPKRVAGKRLTQLTESKFKCRGAEEYRTKYAGECRVDSGCPSGCVCEGTIVDCSR 617
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAF---- 168
KGL +P LP T+ELRL N I + +AF N L +IDL NQI + +AF
Sbjct: 618 KGLRTIPGDLPMYTSELRLTANAIENVHTEAFKNLPNLLKIDLRDNQIKNIEDNAFYGAV 677
Query: 169 --------------------QGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
GL S+ +L+LN+N + + G F L L+TL + N
Sbjct: 678 HVTDLLLSDNELKHIRPKMLAGLSSIKNLSLNDNKIRCIAPGSFLRLRNLQTLNLMVNPL 737
Query: 209 ICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYRE 268
+C+CHL WL WL+ C P +K + D+ +F C
Sbjct: 738 VCNCHLRWLGHWLRDTAVTVDGPTCGWPDELKDSPVQDVLAGDFVC-------------- 783
Query: 269 ECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELT 328
V+ EC+ + CP C C+ +V C + L K+P + +TTEL
Sbjct: 784 -------------VDAEEDECSTDGMCPRGCSCSGSLVRCSRQKLAKIPRRVDSSTTEL- 829
Query: 329 YMVSIDRVDKVL-----LYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRL 383
+ + +D + ++S + + L N IT +P F+N +L + L
Sbjct: 830 -YLDFNNIDTIAPELNDIHSLVKLD----------LSNNKITIIPNNVFSNLTKLSALIL 878
Query: 384 EQNDITELPPKAFANYKRLRRM 405
N + + ++F K LR +
Sbjct: 879 TNNRLQCIQEESFRGLKNLRVL 900
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/274 (35%), Positives = 137/274 (50%), Gaps = 51/274 (18%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N ++ + K F+ LR + L N I+ V A + LK+L +TL+ NNLT +
Sbjct: 224 LDLSSNQLSLISRKTFSGCPSLRNLQLESNHIACVDEAALRQLKNLEVITLSRNNLTRIS 283
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
+F L +LR LR+SEN CDCHLSWL WL+ PRLGLYT C +P ++KG+ + ++
Sbjct: 284 RYLFDGLKKLRVLRLSENPLSCDCHLSWLSGWLRSNPRLGLYTTCHSPFYLKGKPVAELR 343
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
E +FKC+G D + PV C E +CP PC C +VDC
Sbjct: 344 EDDFKCNG---------------LDLMLADEAPV------CNPEATCPTPCTCKGNVVDC 382
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R+KGL ++P P+ TTE+ L+ N ITELP
Sbjct: 383 RDKGLTELPHFFPDDTTEIN------------------------------LQNNRITELP 412
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
+ F+ + LR+I L N I+++ P AF + L
Sbjct: 413 ARRFSGLRVLRKIDLTGNQISKIDPDAFEGLRTL 446
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 132/275 (48%), Gaps = 26/275 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+LN+N + + G F L L+TL + N +C+CHL WL WL+ C P
Sbjct: 707 SLNDNKIRCIAPGSFLRLRNLQTLNLMVNPLVCNCHLRWLGHWLRDTAVTVDGPTCGWPD 766
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K + D+ +F C V+ EC+ + CP C C+ +V C + L K+P +
Sbjct: 767 ELKDSPVQDVLAGDFVC---VDAEEDECSTDGMCPRGCSCSGSLVRCSRQKLAKIPRRVD 823
Query: 124 EATTELRLE-----------------------QNDITELPPKAFANYKRLRRIDLSKNQI 160
+TTEL L+ N IT +P F+N +L + L+ N++
Sbjct: 824 SSTTELYLDFNNIDTIAPELNDIHSLVKLDLSNNKITIIPNNVFSNLTKLSALILTNNRL 883
Query: 161 SKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW 220
+ ++F+GLK+L L+L+ N ++ +P+G F +L + + + N CDC + W+ W
Sbjct: 884 QCIQEESFRGLKNLRVLSLHGNEISMMPEGSFKDLIAITHIALGNNPLYCDCQMRWVSDW 943
Query: 221 LKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
+K+ +C P H+K + +L P + F C+
Sbjct: 944 IKKDFIEPGIARCAEPPHMKDKLVLTAPSNAFMCT 978
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 56/112 (50%)
Query: 97 CPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLS 156
CP C C VDC +GL VP +P+ L LE N+I + + + ++LR + L
Sbjct: 120 CPDECDCDALTVDCSSRGLRFVPRNIPKEVRRLELEGNNIEVINREDLRDLRKLRILQLQ 179
Query: 157 KNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
N + V +AF L SL L +NNN L + D +FA L L L +S N
Sbjct: 180 DNGLHSVDKNAFADLVSLERLRINNNKLKMVSDELFAPLSHLHRLDLSSNQL 231
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 14/115 (12%)
Query: 295 CPHPCRCADGIVDCREKGLNKVPILLPEATTELTY----MVSIDRVDKVLLYSYISNNFK 350
CP C C VDC +GL VP +P+ L + I+R D L
Sbjct: 120 CPDECDCDALTVDCSSRGLRFVPRNIPKEVRRLELEGNNIEVINREDLRDLRKL------ 173
Query: 351 RWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L+ N + + AFA+ L R+R+ N + + + FA L R+
Sbjct: 174 ----RILQLQDNGLHSVDKNAFADLVSLERLRINNNKLKMVSDELFAPLSHLHRL 224
>gi|410917500|ref|XP_003972224.1| PREDICTED: slit homolog 2 protein-like [Takifugu rubripes]
Length = 1565
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 140/455 (30%), Positives = 206/455 (45%), Gaps = 96/455 (21%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ L F + +LRT R+ N+ CDCH++WL WL++ PRLGLYT+C AP
Sbjct: 191 TLNNNNISRLSVASFNHMPKLRTFRLHSNNLQCDCHVAWLSEWLRQRPRLGLYTQCMAPP 250
Query: 64 HIKGQNILDIPEHEFKCS----GPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVP 119
H++G N+ ++ + EF C+ G + + CP C C++ IVDCR KGL ++P
Sbjct: 251 HLRGHNVAEVQKKEFACTDVDEGHQSSSSSSACSVLQCPESCTCSNNIVDCRGKGLTEIP 310
Query: 120 ILLPEATTELRLEQN------------------------DITELPPKAFANYKRLRRIDL 155
LPE TE+RLEQN I+EL AF + L + L
Sbjct: 311 TNLPETITEIRLEQNAIKVIPAGAFSPYKKLRRIDLSNNQISELASDAFQGLRSLNSLVL 370
Query: 156 SKNQISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGV 191
N+I++++ VDAFQ L +L L+L +N L + G
Sbjct: 371 YGNKITEISKGLFEGLFSLQLLLLNANKIACLRVDAFQDLHNLNLLSLYDNKLQTIAKGT 430
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F+ L ++TL +++N FICDCHL WL +L+ P +C +P + + I I +
Sbjct: 431 FSSLRAIQTLHLAQNPFICDCHLKWLADYLQDNPIETSGARCTSPRRLANKRIGQIKSKK 490
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F+CS Y + D+ K G+C A+ +CP CRC VDC +
Sbjct: 491 FRCSAREQ------YIIPGTEDYR-------SKLGGDCFADLACPEKCRCEGTTVDCSNQ 537
Query: 312 GLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKA 371
L K+P +P+ T EL RL N+ T L
Sbjct: 538 KLTKIPDHIPQYTAEL------------------------------RLNNNEFTVLEATG 567
Query: 372 -FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F LR+I L N IT++ F + +
Sbjct: 568 IFKKLPHLRKINLSNNRITDIEEGTFEGASGVNEL 602
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 137/481 (28%), Positives = 201/481 (41%), Gaps = 107/481 (22%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++TL +++N FICDCHL WL +L+ P +C +P
Sbjct: 417 SLYDNKLQTIAKGTFSSLRAIQTLHLAQNPFICDCHLKWLADYLQDNPIETSGARCTSPR 476
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K G+C A+ +CP CRC VDC
Sbjct: 477 RLANKRIGQIKSKKFRCSAREQYIIPGTEDYRSKLGGDCFADLACPEKCRCEGTTVDCSN 536
Query: 113 KGLNKVPILLPEATTELRL-------------------------EQNDITELPPKAF--- 144
+ L K+P +P+ T ELRL N IT++ F
Sbjct: 537 QKLTKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPHLRKINLSNNRITDIEEGTFEGA 596
Query: 145 ---------------------ANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
LR + L N+IS V+ +F GL S+ L+L +N
Sbjct: 597 SGVNELILTSNRLENIHHRMLKGLGGLRTLMLRSNRISCVSNSSFVGLSSVRLLSLYDNQ 656
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N FIC+CHL+WL WL+R + +C P +K
Sbjct: 657 ITSINPGAFDTLHSLSTLNLLANPFICNCHLAWLGDWLRRKRIVTGNPRCQNPYFLKEIP 716
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCA 302
I D+ +F C D + NSC PV + CP C C
Sbjct: 717 IQDVAVQDFACD-----------------DGNDENSCSPVLR----------CPAECSCL 749
Query: 303 DGIVDCREKGLNKVPILLPEATTELTYM---------VSIDRVDKVLLYSYISNNFKRWT 353
D +V C KGL+ +P LP+ TTEL Y+ V + + L +N +
Sbjct: 750 DTVVRCSNKGLSALPKGLPKETTEL-YLDGNHFTQVPVELSNYKHLTLIDLSNNQISTLS 808
Query: 354 NRSRR---------LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRR 404
N S L N + +P +AF K LR + L NDI+ +P AF + L
Sbjct: 809 NHSLSNMSELLTLILSYNRLRCIPVRAFDGLKSLRLLSLHGNDISLIPEGAFKDLSSLSH 868
Query: 405 M 405
+
Sbjct: 869 L 869
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 143/294 (48%), Gaps = 53/294 (18%)
Query: 115 LNKVPILLPEATTELR---LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L P LL TT+L L +N I +P KAF ++ + L N I+ + AF+ L
Sbjct: 125 LAVFPELLFLGTTKLSRLDLSENQIQGVPRKAFRGAVEIKNLQLDYNHITCIEDGAFRAL 184
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ L F + +LRT R+ N+ CDCH++WL WL++ PRLGLYT
Sbjct: 185 RDLEVLTLNNNNISRLSVASFNHMPKLRTFRLHSNNLQCDCHVAWLSEWLRQRPRLGLYT 244
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C AP H++G N+ ++ + EF C+ +S CS
Sbjct: 245 QCMAPPHLRGHNVAEVQKKEFACTDVDEGHQSSSSSSACSV------------------- 285
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
CP C C++ IVDCR KGL ++P LPE TE+
Sbjct: 286 -LQCPESCTCSNNIVDCRGKGLTEIPTNLPETITEI------------------------ 320
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF+ YK+LRRI L N I+EL AF + L +
Sbjct: 321 ------RLEQNAIKVIPAGAFSPYKKLRRIDLSNNQISELASDAFQGLRSLNSL 368
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 95/277 (34%), Positives = 141/277 (50%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N FIC+CHL+WL WL+R + +C P
Sbjct: 651 SLYDNQITSINPGAFDTLHSLSTLNLLANPFICNCHLAWLGDWLRRKRIVTGNPRCQNPY 710
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C ++ + C+ CP C C D +V C KGL+ +P LP
Sbjct: 711 FLKEIPIQDVAVQDFACDDGNDENS--CSPVLRCPAECSCLDTVVRCSNKGLSALPKGLP 768
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVA------------------- 164
+ TTEL L+ N T++P + +NYK L IDLS NQIS ++
Sbjct: 769 KETTELYLDGNHFTQVPVE-LSNYKHLTLIDLSNNQISTLSNHSLSNMSELLTLILSYNR 827
Query: 165 -----VDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
V AF GLKSL L+L+ N+++ +P+G F +L L L + N CDCH+ WL
Sbjct: 828 LRCIPVRAFDGLKSLRLLSLHGNDISLIPEGAFKDLSSLSHLALGANPLHCDCHMQWLSD 887
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C+G
Sbjct: 888 WVKSGYKEPGIARCAGPGDMADKLLLTTPSKKFTCTG 924
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 59/112 (52%)
Query: 97 CPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLS 156
CP C C VDC +GL VP +P T L L N++T++ FA + LR + L
Sbjct: 38 CPTQCSCTGTTVDCHGQGLRSVPRNIPRNTERLDLNANNLTKITKADFAGLRHLRVLQLM 97
Query: 157 KNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+N+I+ + AFQ LK L L LN NNL P+ +F +L L +SEN
Sbjct: 98 ENKITTIERGAFQDLKELERLRLNRNNLAVFPELLFLGTTKLSRLDLSENQI 149
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 14/115 (12%)
Query: 295 CPHPCRCADGIVDCREKGLNKVPILLPEATTELTY----MVSIDRVDKVLLYSYISNNFK 350
CP C C VDC +GL VP +P T L + I + D L
Sbjct: 38 CPTQCSCTGTTVDCHGQGLRSVPRNIPRNTERLDLNANNLTKITKADFAGLRHL------ 91
Query: 351 RWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R +L +N IT + AF + K L R+RL +N++ P F +L R+
Sbjct: 92 ----RVLQLMENKITTIERGAFQDLKELERLRLNRNNLAVFPELLFLGTTKLSRL 142
>gi|190339978|gb|AAI63568.1| Slit1b protein [Danio rerio]
Length = 1531
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 143/452 (31%), Positives = 216/452 (47%), Gaps = 71/452 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ +P F + +LRT R+ NS CDCHLSWL +WL++ P LGLYT+C +P+
Sbjct: 184 TLNNNNISAIPISSFNHMPKLRTFRLHWNSLRCDCHLSWLSQWLRQRPALGLYTQCSSPA 243
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECA-AEPSCPHPCRCADGIVDCREKGLNKVPILL 122
H+ G N+ ++ + +F C+G ++ C A SCP C C + IVDCR KGL +P +
Sbjct: 244 HLHGLNLAELQKKDFTCAGALDSSPQPCGLASGSCPPMCSCTNNIVDCRGKGLTAIPANM 303
Query: 123 PEATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLSKN 158
PE+ TE+RLEQN I+E+ P AF + L + L N
Sbjct: 304 PESMTEIRLEQNGIKSVPPGAFSSYKRLRRIDLSNNQISEIAPDAFHGLRSLNSLVLYGN 363
Query: 159 QISK------------------------VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAE 194
+I+ V V+ FQ L++L+ L+L +N + L G FA
Sbjct: 364 KITDLPRGVFDGLSALELLLLNANKIHCVRVNVFQDLENLSLLSLYDNKIQTLAKGTFAP 423
Query: 195 LFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
L ++TL +++N F+CDC L WL +L+ P +C +P + + I I +F+C
Sbjct: 424 LKSIQTLHLAQNPFVCDCGLKWLADFLRSNPIETSGARCSSPRRLANKRISQIKSKKFRC 483
Query: 255 SGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLN 314
S Y S D + +C ++P CP CRC +VDC L
Sbjct: 484 SAKEQ------YYIPGSED---------TRMNKDCNSKPVCPPKCRCEATVVDCSNLRLT 528
Query: 315 KVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPPKAFA 373
K P LP +TTEL ++ D +L + + F+ T+ + L N ITE+ AF
Sbjct: 529 KFPEHLPLSTTEL----RLNNNDLSILEA--TGLFRPLTHLKKINLSNNKITEIEDGAFD 582
Query: 374 NYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L N + + F LR +
Sbjct: 583 GASSVVELHLTANLLVSVRGGMFRGMDGLRML 614
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 107/294 (36%), Positives = 154/294 (52%), Gaps = 56/294 (19%)
Query: 115 LNKVPILL---PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L ++P LL A + L L +N+I +P +AF ++ + L KN IS + AF+ +
Sbjct: 118 LQQLPELLFLKNPALSRLDLSENNIQMIPRRAFRGATDIKNLQLDKNHISCIEDGAFRAM 177
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ +P F + +LRT R+ NS CDCHLSWL +WL++ P LGLYT
Sbjct: 178 RVLEVLTLNNNNISAIPISSFNHMPKLRTFRLHWNSLRCDCHLSWLSQWLRQRPALGLYT 237
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C +P+H+ G N+ ++ + +F C+G + D P +P G A
Sbjct: 238 QCSSPAHLHGLNLAELQKKDFTCAG--------------ALDSSP-------QPCG--LA 274
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C + IVDCR KGL +P +PE+ TE+
Sbjct: 275 SGSCPPMCSCTNNIVDCRGKGLTAIPANMPESMTEI------------------------ 310
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +PP AF++YKRLRRI L N I+E+ P AF + L +
Sbjct: 311 ------RLEQNGIKSVPPGAFSSYKRLRRIDLSNNQISEIAPDAFHGLRSLNSL 358
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 180/453 (39%), Gaps = 89/453 (19%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G FA L ++TL +++N F+CDC L WL +L+ P +C +P
Sbjct: 407 SLYDNKIQTLAKGTFAPLKSIQTLHLAQNPFVCDCGLKWLADFLRSNPIETSGARCSSPR 466
Query: 64 HIKGQNILDIPEHEFKCSG------PVEKPT---GECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS P + T +C ++P CP CRC +VDC
Sbjct: 467 RLANKRISQIKSKKFRCSAKEQYYIPGSEDTRMNKDCNSKPVCPPKCRCEATVVDCSNLR 526
Query: 115 LNKVPILLPEATTELRL-------------------------EQNDITELPPKAFANYKR 149
L K P LP +TTELRL N ITE+ AF
Sbjct: 527 LTKFPEHLPLSTTELRLNNNDLSILEATGLFRPLTHLKKINLSNNKITEIEDGAFDGASS 586
Query: 150 ------------------------LRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLT 185
LR + L N I V +F GL+++ L+L +N LT
Sbjct: 587 VVELHLTANLLVSVRGGMFRGMDGLRMLMLRNNHIRCVHNSSFSGLQNVRLLSLYDNQLT 646
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F CDC LSWL WL+ + +C P+ ++ +
Sbjct: 647 TIMPGAFDSLPNLSTLNLLANPFSCDCRLSWLGEWLRSRQIVTGNPRCQNPAFLREIPLQ 706
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ + +F C +E C +P CP C C D +
Sbjct: 707 DVAKPDFICDKDVLEQDVS------------------------CIPKPQCPEQCTCVDSV 742
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L+ +P +P TEL +D + S + L N I+
Sbjct: 743 VRCSNKHLSALPRGVPLNVTEL-------YLDGNVFVSIPQELSAFRQLQLLDLSNNKIS 795
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAFAN 398
L +F N +L + L N + +PP F
Sbjct: 796 SLTNTSFTNMSQLTTLILSYNALRCIPPLVFGG 828
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 151/325 (46%), Gaps = 34/325 (10%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N LT + G F L L TL + N F CDC LSWL WL+ + +C P+
Sbjct: 639 SLYDNQLTTIMPGAFDSLPNLSTLNLLANPFSCDCRLSWLGEWLRSRQIVTGNPRCQNPA 698
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ + +F C V + C +P CP C C D +V C K L+ +P +P
Sbjct: 699 FLREIPLQDVAKPDFICDKDVLEQDVSCIPKPQCPEQCTCVDSVVRCSNKHLSALPRGVP 758
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
TEL L+ N + P+ + +++L+ +DLS N+IS + +F + LT+L L+ N
Sbjct: 759 LNVTELYLDGNVFVSI-PQELSAFRQLQLLDLSNNKISSLTNTSFTNMSQLTTLILSYNA 817
Query: 184 LTYLPDGVFA--------------------ELFR----LRTLRISENSFICDCHLSWLHR 219
L +P VF ++FR L L I N CDC L WL
Sbjct: 818 LRCIPPLVFGGLSSLRLLSLHGNNISELHQQIFRDAASLSHLAIGANPLYCDCRLRWLSD 877
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
W+K + +C P ++G+ +L P + F+C+G + S +CS P +S
Sbjct: 878 WVKSGYKEPGIARCAGPQGMEGKLLLTTPGNTFQCTGPVDASVSG----KCS----PCSS 929
Query: 280 CPVEKPTGECAAEPSCPHPCRCADG 304
P + G C +P + C C G
Sbjct: 930 NPCQN-QGRCHNDPLHQYKCSCPQG 953
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 55/113 (48%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDC VP +P+ T L L N++T + FA K LR + L
Sbjct: 30 ACPPHCSCTGSTVDCHGLAFKSVPRNIPKTTERLDLNANNLTHIGKDDFAGLKHLRILHL 89
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
NQI + AF LK L L LN N L LP+ +F + L L +SEN+
Sbjct: 90 MDNQIVSIDRGAFSDLKELDRLRLNRNRLQQLPELLFLKNPALSRLDLSENNI 142
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C VDC VP +P+ T L ++ L ++F
Sbjct: 30 ACPPHCSCTGSTVDCHGLAFKSVPRNIPKTTERLD-------LNANNLTHIGKDDFAGLK 82
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ R L N I + AF++ K L R+RL +N + +LP F L R+
Sbjct: 83 HLRILHLMDNQIVSIDRGAFSDLKELDRLRLNRNRLQQLPELLFLKNPALSRL 135
>gi|432903726|ref|XP_004077200.1| PREDICTED: slit homolog 1 protein-like isoform 2 [Oryzias latipes]
Length = 1533
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 138/444 (31%), Positives = 208/444 (46%), Gaps = 96/444 (21%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ +P F + +LRT R+ N+ CDCHL+WL +WL++ P +GL+T+C PS
Sbjct: 189 TLNNNNISSIPVSSFNHMPKLRTFRLHSNNLNCDCHLAWLAQWLRQRPTIGLFTQCTVPS 248
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGE-CA-AEPSCPHPCRCADGIVDCREKGLNKVPIL 121
+KG N+ ++ +HEF CSG E + + C+ SCP C C++ IVDCR KGL +P
Sbjct: 249 ELKGLNVAEVQKHEFTCSGHQESSSLQPCSIGGGSCPAMCTCSNNIVDCRGKGLTAIPAN 308
Query: 122 LPEATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLSK 157
LP+ E+RLEQN I+E+ P AF + L + L
Sbjct: 309 LPDNMAEIRLEQNGIKSVPPGAFSSYKKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYG 368
Query: 158 NQISK------------------------VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFA 193
N+I+ + + FQ L++L+ L+L +N + L G F
Sbjct: 369 NKITDLPKGVFDGLYALQLLLLNANKIHCIRANTFQDLQNLSLLSLYDNKIQTLAKGTFT 428
Query: 194 ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFK 253
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I +F+
Sbjct: 429 SLRAIQTLHLAQNPFICDCNLKWLADYLRSNPIETSGARCASPRRLANKRIGQIKSKKFR 488
Query: 254 CSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL 313
CS Y + D ++ C ++P CP CRC +VDC L
Sbjct: 489 CSAKEQ------YVIPGTEDVRLNDA---------CNSDPVCPPKCRCESNVVDCSNLKL 533
Query: 314 NKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPK-AF 372
K+P +P +T+EL RL N+IT L AF
Sbjct: 534 TKIPEHIPSSTSEL------------------------------RLNNNEITSLDANGAF 563
Query: 373 ANYKRLRRIRLEQNDITELPPKAF 396
N +L++I L N ITE+ F
Sbjct: 564 KNLAQLKKINLSNNKITEIEDGTF 587
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 154/294 (52%), Gaps = 55/294 (18%)
Query: 115 LNKVPILLPE---ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L ++P LL + A + L L +N I +P KAF ++ + L KN IS + AF+ +
Sbjct: 123 LQQLPELLFQKNPALSRLDLSENFIQSIPRKAFRGATDIKNLQLDKNHISCIEDGAFRAM 182
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ +P F + +LRT R+ N+ CDCHL+WL +WL++ P +GL+T
Sbjct: 183 RGLEVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNNLNCDCHLAWLAQWLRQRPTIGLFT 242
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C PS +KG N+ ++ +HEF CSG ++E S+ P C +
Sbjct: 243 QCTVPSELKGLNVAEVQKHEFTCSG---------HQE--SSSLQP---CSI--------G 280
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++ IVDCR KGL +P LP+ E+
Sbjct: 281 GGSCPAMCTCSNNIVDCRGKGLTAIPANLPDNMAEI------------------------ 316
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +PP AF++YK+LRRI L N I+E+ P AF + L +
Sbjct: 317 ------RLEQNGIKSVPPGAFSSYKKLRRIDLSNNQISEIAPDAFQGLRSLNSL 364
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 186/453 (41%), Gaps = 91/453 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 413 SLYDNKIQTLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADYLRSNPIETSGARCASPR 472
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + C ++P CP CRC +VDC
Sbjct: 473 RLANKRIGQIKSKKFRCSAKEQYVIPGTEDVRLNDACNSDPVCPPKCRCESNVVDCSNLK 532
Query: 115 LNKVPILLPEATTELRL-------------------------EQNDITELPPKAFA---- 145
L K+P +P +T+ELRL N ITE+ F
Sbjct: 533 LTKIPEHIPSSTSELRLNNNEITSLDANGAFKNLAQLKKINLSNNKITEIEDGTFEGASA 592
Query: 146 --------------------NYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLT 185
+ LR + L N+IS V D+F GL ++ L+L +N LT
Sbjct: 593 VIELHLTANQIDSVRSGMFRGLEGLRMLMLRNNKISCVHNDSFTGLHNVRLLSLYDNQLT 652
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + NSF CDC L+WL WL+ + +C P+ +K +
Sbjct: 653 TITPGAFDTLQTLSTLNLLANSFNCDCRLAWLGDWLRSRKIVTGNPRCQRPAFLKEIPLQ 712
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E+ C P CP C C + +
Sbjct: 713 DVALPDFRCDEGQEES--------------------------SCIPRPQCPSECTCLETV 746
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L+ +P +P TEL +D ++ +S FK + L N I
Sbjct: 747 VRCSNKHLHSLPRGIPRNVTELY----LDGNQFSIVPKELS-TFKYL--QLVDLSNNKIN 799
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAFAN 398
L +FAN +L + L N + +P AF+
Sbjct: 800 SLTNSSFANMSQLTTLILSYNSLRCIPKMAFSG 832
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N LT + G F L L TL + NSF CDC L+WL WL+ + +C P+
Sbjct: 645 SLYDNQLTTITPGAFDTLQTLSTLNLLANSFNCDCRLAWLGDWLRSRKIVTGNPRCQRPA 704
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K + D+ +F+C E+ + C P CP C C + +V C K L+ +P +P
Sbjct: 705 FLKEIPLQDVALPDFRCDEGQEESS--CIPRPQCPSECTCLETVVRCSNKHLHSLPRGIP 762
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
TEL L+ N + + PK + +K L+ +DLS N+I+ + +F + LT+L L+ N+
Sbjct: 763 RNVTELYLDGNQFS-IVPKELSTFKYLQLVDLSNNKINSLTNSSFANMSQLTTLILSYNS 821
Query: 184 L------------------------TYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
L + LPDG+F ++ L L I N CDC L WL
Sbjct: 822 LRCIPKMAFSGLHSLRLLSLHGNEISELPDGIFNDVASLSHLAIGANPLHCDCRLRWLSD 881
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 882 WVKTGYKEPGIARCAGPQGLEGKLLLTTPAKKFECHG 918
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 57/111 (51%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC GL +P +P T L L N++T + F K +R + L
Sbjct: 35 ACPALCTCSGVTVDCHGLGLKTMPRNIPRNTERLELNGNNLTRITKSDFTGLKYVRVLQL 94
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
+NQI+ V AF +K L L LN N L LP+ +F + L L +SEN
Sbjct: 95 MENQITVVERGAFDDMKELERLRLNRNQLQQLPELLFQKNPALSRLDLSEN 145
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ VDC GL +P +P T L ++ + + ++ + + R
Sbjct: 35 ACPALCTCSGVTVDCHGLGLKTMPRNIPRNTERLE--LNGNNLTRITKSDFTGLKYVRVL 92
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+L +N IT + AF + K L R+RL +N + +LP F L R+
Sbjct: 93 ----QLMENQITVVERGAFDDMKELERLRLNRNQLQQLPELLFQKNPALSRL 140
>gi|190337599|gb|AAI63538.1| Slit homolog 1a (Drosophila) [Danio rerio]
Length = 1524
Score = 220 bits (561), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 137/453 (30%), Positives = 212/453 (46%), Gaps = 96/453 (21%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ +P F + +LRT R+ N+ +CDC LSWL +WL+ P +GL+T+C +P+
Sbjct: 180 TLNNNNISSIPVSSFNHMPKLRTFRLHSNNLVCDCVLSWLSQWLRERPNIGLFTQCSSPA 239
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGE-CA-AEPSCPHPCRCADGIVDCREKGLNKVPIL 121
++G N+ ++ +HEF CSG + G+ C+ + SCP C C + IVDCR KGL +P
Sbjct: 240 PLRGLNVAEVQKHEFSCSGQSDSAVGQSCSLSSGSCPAVCSCNNNIVDCRGKGLTLIPSS 299
Query: 122 LPEATTELRLEQNDI------------------------TELPPKAFANYKRLRRIDLSK 157
LP++ TE+RLEQN I +EL P AF + L + L
Sbjct: 300 LPDSMTEIRLEQNSIKSIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 359
Query: 158 NQISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFA 193
N+I+ + + FQ L++L+ L+L +N + L G F+
Sbjct: 360 NKITDLPRGVFDGLHALQLLLLNANKIHCLRANTFQDLQNLSLLSLYDNKIQTLAKGTFS 419
Query: 194 ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFK 253
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I +F+
Sbjct: 420 SLRAIQTLHLAQNPFICDCNLKWLADYLRSNPIETSGARCTSPRRLANKRIGQIKSKKFR 479
Query: 254 CSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL 313
CS Y + D N +C +P CP CRC +VDC L
Sbjct: 480 CSAKEQ------YVIPGTEDSRLNN---------DCNNDPVCPAKCRCESNVVDCSNLRL 524
Query: 314 NKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPP-KAF 372
+++P +P +TTEL RL N+IT + AF
Sbjct: 525 DRIPEHVPASTTEL------------------------------RLNNNEITTIEAMGAF 554
Query: 373 ANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L++I L N I+E+ AF + +
Sbjct: 555 KTLTHLKKINLSNNKISEIEDGAFEGASSVNEL 587
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 153/294 (52%), Gaps = 55/294 (18%)
Query: 115 LNKVPILLPE---ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L+++P LL + A + L L +N I +P KAF ++ + L KN IS + AF+ +
Sbjct: 114 LHQLPELLFQKNAALSRLDLSENFIQAIPRKAFRGATDIKNLQLDKNHISCIEDGAFRAM 173
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ +P F + +LRT R+ N+ +CDC LSWL +WL+ P +GL+T
Sbjct: 174 RGLEVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNNLVCDCVLSWLSQWLRERPNIGLFT 233
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C +P+ ++G N+ ++ +HEF CSG S D SC + +
Sbjct: 234 QCSSPAPLRGLNVAEVQKHEFSCSGQS--------------DSAVGQSCSL--------S 271
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C + IVDCR KGL +P LP++ TE+
Sbjct: 272 SGSCPAVCSCNNNIVDCRGKGLTLIPSSLPDSMTEI------------------------ 307
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +PP AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 308 ------RLEQNSIKSIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 355
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 125/477 (26%), Positives = 191/477 (40%), Gaps = 101/477 (21%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F+ L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 404 SLYDNKIQTLAKGTFSSLRAIQTLHLAQNPFICDCNLKWLADYLRSNPIETSGARCTSPR 463
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + +C +P CP CRC +VDC
Sbjct: 464 RLANKRIGQIKSKKFRCSAKEQYVIPGTEDSRLNNDCNNDPVCPAKCRCESNVVDCSNLR 523
Query: 115 LNKVPILLPEATTELRL-------------------------EQNDITELPPKAFANYKR 149
L+++P +P +TTELRL N I+E+ AF
Sbjct: 524 LDRIPEHVPASTTELRLNNNEITTIEAMGAFKTLTHLKKINLSNNKISEIEDGAFEGASS 583
Query: 150 LRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN------------------------NNLT 185
+ + L+ NQ+ V F+GL+ L L L N N LT
Sbjct: 584 VNELHLTANQLDLVHSGMFRGLEGLRMLMLRNNRISCIHNNSFTGLHNVRLLSLYDNTLT 643
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+C L+WL WL+ + +C P+ +K +
Sbjct: 644 TIAPGAFDTLQSLSTLNLLANPFNCNCRLAWLSSWLRNRKIVTGNPRCHRPAFLKEIPLQ 703
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C D H S CA CP C C + +
Sbjct: 704 DVAAPDFRCE-----------------DDHEDVS---------CAPPVHCPADCTCLESV 737
Query: 306 VDCREKGLNKVPILLPEATTEL--------TYMVSIDRVDKVLLYSYISNNFKRWTNRSR 357
V C K L +P +P TEL T + + L +N TN S
Sbjct: 738 VRCSNKHLQALPKGIPRNITELYLDGNQLSTVPKELSSFKSLQLVDLSNNRISSLTNSSF 797
Query: 358 R---------LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P AF+ + LR + L NDI+ELP F++ + L +
Sbjct: 798 TNMSQLTTLILSYNALRCIPTLAFSGLRSLRLLSLHGNDISELPDGIFSDAQSLSHL 854
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 154/326 (47%), Gaps = 36/326 (11%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N LT + G F L L TL + N F C+C L+WL WL+ + +C P+
Sbjct: 636 SLYDNTLTTIAPGAFDTLQSLSTLNLLANPFNCNCRLAWLSSWLRNRKIVTGNPRCHRPA 695
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K + D+ +F+C E + CA CP C C + +V C K L +P +P
Sbjct: 696 FLKEIPLQDVAAPDFRCEDDHEDVS--CAPPVHCPADCTCLESVVRCSNKHLQALPKGIP 753
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN--- 180
TEL L+ N ++ +P K +++K L+ +DLS N+IS + +F + LT+L L+
Sbjct: 754 RNITELYLDGNQLSTVP-KELSSFKSLQLVDLSNNRISSLTNSSFTNMSQLTTLILSYNA 812
Query: 181 ---------------------NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
N+++ LPDG+F++ L L I N CDC L WL
Sbjct: 813 LRCIPTLAFSGLRSLRLLSLHGNDISELPDGIFSDAQSLSHLAIGANPLHCDCGLRWLSD 872
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
W+K + +C +P ++G+ +L P F+C G E S I + +P S
Sbjct: 873 WVKTGYKEPGIARCASPHGMEGKLLLTTPAKRFECQG---EVDSAILAK-----CNPCAS 924
Query: 280 CPVEKPTGECAAEPSCPHPCRCADGI 305
P G C A+ + + C+CADG
Sbjct: 925 GPCLH-QGVCEADQTDGYRCKCADGF 949
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 56/116 (48%)
Query: 91 CAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRL 150
C CP C C+ VDC GL +P +P T L L N++T + F K L
Sbjct: 21 CKTGSGCPALCTCSGTTVDCHGLGLKNIPRNIPRNTERLELNGNNLTRINRNDFTGLKYL 80
Query: 151 RRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
R + L +NQI V AF ++ L L LN N L LP+ +F + L L +SEN
Sbjct: 81 RVLQLMENQIVTVERGAFDEMRELERLRLNRNQLHQLPELLFQKNAALSRLDLSEN 136
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 50/121 (41%), Gaps = 14/121 (11%)
Query: 289 CAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTY----MVSIDRVDKVLLYSY 344
C CP C C+ VDC GL +P +P T L + I+R D L Y
Sbjct: 21 CKTGSGCPALCTCSGTTVDCHGLGLKNIPRNIPRNTERLELNGNNLTRINRNDFTGL-KY 79
Query: 345 ISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRR 404
+ R +L +N I + AF + L R+RL +N + +LP F L R
Sbjct: 80 L---------RVLQLMENQIVTVERGAFDEMRELERLRLNRNQLHQLPELLFQKNAALSR 130
Query: 405 M 405
+
Sbjct: 131 L 131
>gi|165993279|emb|CAP71951.1| slit1b [Danio rerio]
Length = 1532
Score = 220 bits (561), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 142/452 (31%), Positives = 217/452 (48%), Gaps = 70/452 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ +P F + +LRT R+ NS CDC LSWL +WL++ P LGLYT+C +P+
Sbjct: 184 TLNNNNISAIPISSFNHMPKLRTFRLHWNSLRCDCQLSWLSQWLRQRPALGLYTQCSSPA 243
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECA-AEPSCPHPCRCADGIVDCREKGLNKVPILL 122
H+ G N+ ++ + +F C+G ++ C A SCP C C + IVDCR KGL +P +
Sbjct: 244 HLHGLNLAELQKKDFTCAGALDSSPQPCGLASGSCPPMCSCTNNIVDCRGKGLTAIPANM 303
Query: 123 PEATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLSKN 158
PE+ TE+RLEQN I+E+ P AF + L + L N
Sbjct: 304 PESMTEIRLEQNGIKSVPPGAFSSYKRLRRIDLSNNQISEIAPDAFHGLRSLNSLVLYGN 363
Query: 159 QISK------------------------VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAE 194
+I+ V V+ FQ L++L+ L+L +N + L G FA
Sbjct: 364 KITDLPRGVFDGLSALELLLLNANKIHCVRVNVFQDLENLSLLSLYDNKIQTLAKGTFAP 423
Query: 195 LFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
L ++TL +++N F+CDC L WL +L+ P +C +P + + I I +F+C
Sbjct: 424 LKSIQTLHLAQNPFVCDCGLKWLADFLRSNPIETSGARCSSPRRLANKRISQIKSKKFRC 483
Query: 255 SGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLN 314
S + + Y S D + +C ++P CP CRC +VDC L
Sbjct: 484 SAAKEQ-----YYIPGSED---------TRMNKDCNSKPVCPPKCRCEATVVDCSNLRLT 529
Query: 315 KVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPPKAFA 373
K P LP +TTEL ++ D +L + + F+ T+ + L N ITE+ AF
Sbjct: 530 KFPEHLPLSTTEL----RLNNNDLSILEA--TGLFRPLTHLKKINLSNNKITEIEDGAFE 583
Query: 374 NYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L N + + F LR +
Sbjct: 584 GASSVVELHLTANLLVSVRGGMFRGMDGLRML 615
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/294 (36%), Positives = 153/294 (52%), Gaps = 56/294 (19%)
Query: 115 LNKVPILL---PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L ++P LL A + L L +N+I +P +AF ++ + L KN IS + AF+ +
Sbjct: 118 LQQLPELLFLKNPALSRLDLSENNIQMIPRRAFRGATDIKNLQLDKNHISCIEDGAFRAM 177
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ +P F + +LRT R+ NS CDC LSWL +WL++ P LGLYT
Sbjct: 178 RVLEVLTLNNNNISAIPISSFNHMPKLRTFRLHWNSLRCDCQLSWLSQWLRQRPALGLYT 237
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C +P+H+ G N+ ++ + +F C+G + D P +P G A
Sbjct: 238 QCSSPAHLHGLNLAELQKKDFTCAG--------------ALDSSP-------QPCG--LA 274
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C + IVDCR KGL +P +PE+ TE+
Sbjct: 275 SGSCPPMCSCTNNIVDCRGKGLTAIPANMPESMTEI------------------------ 310
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +PP AF++YKRLRRI L N I+E+ P AF + L +
Sbjct: 311 ------RLEQNGIKSVPPGAFSSYKRLRRIDLSNNQISEIAPDAFHGLRSLNSL 358
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 180/454 (39%), Gaps = 90/454 (19%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G FA L ++TL +++N F+CDC L WL +L+ P +C +P
Sbjct: 407 SLYDNKIQTLAKGTFAPLKSIQTLHLAQNPFVCDCGLKWLADFLRSNPIETSGARCSSPR 466
Query: 64 HIKGQNILDIPEHEFKCSGPVEK---PTGE-------CAAEPSCPHPCRCADGIVDCREK 113
+ + I I +F+CS E+ P E C ++P CP CRC +VDC
Sbjct: 467 RLANKRISQIKSKKFRCSAAKEQYYIPGSEDTRMNKDCNSKPVCPPKCRCEATVVDCSNL 526
Query: 114 GLNKVPILLPEATTELRL-------------------------EQNDITELPPKAFANYK 148
L K P LP +TTELRL N ITE+ AF
Sbjct: 527 RLTKFPEHLPLSTTELRLNNNDLSILEATGLFRPLTHLKKINLSNNKITEIEDGAFEGAS 586
Query: 149 R------------------------LRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL 184
LR + L N I V +F GL+++ L+L +N L
Sbjct: 587 SVVELHLTANLLVSVRGGMFRGMDGLRMLMLRNNHIRCVHNSSFSGLQNVRLLSLYDNQL 646
Query: 185 TYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNI 244
+ + G F L L TL + N F CDC LSWL WL+ + +C P+ ++ +
Sbjct: 647 STIMPGAFDSLPNLSTLNLLANPFSCDCRLSWLGEWLRSRQIVTGNPRCQNPAFLREIPL 706
Query: 245 LDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADG 304
D+ + +F C +E C +P CP C C D
Sbjct: 707 QDVAKPDFICDKDVLEQDVS------------------------CIPKPQCPEQCTCVDS 742
Query: 305 IVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDI 364
+V C K L+ +P +P TEL +D + S + L N I
Sbjct: 743 VVRCSNKHLSALPRGVPLNVTEL-------YLDGNVFVSIPQELSAFRQLQLLDLSNNKI 795
Query: 365 TELPPKAFANYKRLRRIRLEQNDITELPPKAFAN 398
+ L +F N +L + L N + +PP F
Sbjct: 796 SSLTNTSFTNMSQLTTLILSYNALRCIPPLVFGG 829
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 151/325 (46%), Gaps = 34/325 (10%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L+ + G F L L TL + N F CDC LSWL WL+ + +C P+
Sbjct: 640 SLYDNQLSTIMPGAFDSLPNLSTLNLLANPFSCDCRLSWLGEWLRSRQIVTGNPRCQNPA 699
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ + +F C V + C +P CP C C D +V C K L+ +P +P
Sbjct: 700 FLREIPLQDVAKPDFICDKDVLEQDVSCIPKPQCPEQCTCVDSVVRCSNKHLSALPRGVP 759
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
TEL L+ N + P+ + +++L+ +DLS N+IS + +F + LT+L L+ N
Sbjct: 760 LNVTELYLDGNVFVSI-PQELSAFRQLQLLDLSNNKISSLTNTSFTNMSQLTTLILSYNA 818
Query: 184 LTYLPDGVFA--------------------ELFR----LRTLRISENSFICDCHLSWLHR 219
L +P VF ++FR L L I N CDC L WL
Sbjct: 819 LRCIPPLVFGGLSSLRLLSLHGNNISELHQQIFRDAASLSHLAIGANPLYCDCRLRWLSD 878
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
W+K + +C P ++G+ +L P + F+C+G + S +CS P +S
Sbjct: 879 WVKSGYKEPGIARCAGPQGMEGKLLLTTPGNTFQCTGPVDASVSG----KCS----PCSS 930
Query: 280 CPVEKPTGECAAEPSCPHPCRCADG 304
P + G C +P + C C G
Sbjct: 931 NPCQN-QGRCHNDPLHQYKCSCPQG 954
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 55/113 (48%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDC VP +P+ T L L N++T + FA K LR + L
Sbjct: 30 ACPPHCSCTGSTVDCHGLAFKSVPRNIPKTTERLDLNANNLTHIGKDDFAGLKHLRILHL 89
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
NQI + AF LK L L LN N L LP+ +F + L L +SEN+
Sbjct: 90 MDNQIVSIDRGAFTDLKELDRLRLNRNRLQQLPELLFLKNPALSRLDLSENNI 142
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 46/113 (40%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C VDC VP +P+ T L ++ L ++F
Sbjct: 30 ACPPHCSCTGSTVDCHGLAFKSVPRNIPKTTERLD-------LNANNLTHIGKDDFAGLK 82
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ R L N I + AF + K L R+RL +N + +LP F L R+
Sbjct: 83 HLRILHLMDNQIVSIDRGAFTDLKELDRLRLNRNRLQQLPELLFLKNPALSRL 135
>gi|77993316|ref|NP_001030147.1| slit homolog 1b precursor [Danio rerio]
gi|73624756|gb|AAZ79235.1| Slit1b [Danio rerio]
Length = 1532
Score = 220 bits (561), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 142/452 (31%), Positives = 217/452 (48%), Gaps = 70/452 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ +P F + +LRT R+ NS CDC LSWL +WL++ P LGLYT+C +P+
Sbjct: 184 TLNNNNISAIPISSFNHMPKLRTFRLHWNSLRCDCQLSWLSQWLRQRPALGLYTQCSSPA 243
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECA-AEPSCPHPCRCADGIVDCREKGLNKVPILL 122
H+ G N+ ++ + +F C+G ++ C A SCP C C + IVDCR KGL +P +
Sbjct: 244 HLHGLNLAELQKKDFTCAGALDSSPQPCGLASGSCPPMCSCTNNIVDCRGKGLTAIPANM 303
Query: 123 PEATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLSKN 158
PE+ TE+RLEQN I+E+ P AF + L + L N
Sbjct: 304 PESMTEIRLEQNGIKSVPPGAFSSYKRLRRIDLSNNQISEIAPDAFHGLRSLNSLVLYGN 363
Query: 159 QISK------------------------VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAE 194
+I+ V V+ FQ L++L+ L+L +N + L G FA
Sbjct: 364 KITDLPRGVFDGLSALELLLLNANKIHCVRVNVFQDLENLSLLSLYDNKIQTLAKGTFAP 423
Query: 195 LFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
L ++TL +++N F+CDC L WL +L+ P +C +P + + I I +F+C
Sbjct: 424 LKSIQTLHLAQNPFVCDCGLKWLADFLRSNPIETSGARCSSPRRLANKRISQIKSKKFRC 483
Query: 255 SGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLN 314
S + + Y S D + +C ++P CP CRC +VDC L
Sbjct: 484 SAAKEQ-----YYIPGSED---------TRMNKDCNSKPVCPPKCRCEATVVDCSNLRLT 529
Query: 315 KVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPPKAFA 373
K P LP +TTEL ++ D +L + + F+ T+ + L N ITE+ AF
Sbjct: 530 KFPEHLPLSTTEL----RLNNNDLSILEA--TGLFRPLTHLKKINLSNNKITEIEDGAFE 583
Query: 374 NYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L N + + F LR +
Sbjct: 584 GASSVVELHLTANLLVSVRGGMFRGMDGLRML 615
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/294 (36%), Positives = 153/294 (52%), Gaps = 56/294 (19%)
Query: 115 LNKVPILL---PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L ++P LL A + L L +N+I +P +AF ++ + L KN IS + AF+ +
Sbjct: 118 LQQLPELLFLKNPALSRLDLSENNIQMIPRRAFRGATDIKNLQLDKNHISCIEDGAFRAM 177
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ +P F + +LRT R+ NS CDC LSWL +WL++ P LGLYT
Sbjct: 178 RVLEVLTLNNNNISAIPISSFNHMPKLRTFRLHWNSLRCDCQLSWLSQWLRQRPALGLYT 237
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C +P+H+ G N+ ++ + +F C+G + D P +P G A
Sbjct: 238 QCSSPAHLHGLNLAELQKKDFTCAG--------------ALDSSP-------QPCG--LA 274
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C + IVDCR KGL +P +PE+ TE+
Sbjct: 275 SGSCPPMCSCTNNIVDCRGKGLTAIPANMPESMTEI------------------------ 310
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +PP AF++YKRLRRI L N I+E+ P AF + L +
Sbjct: 311 ------RLEQNGIKSVPPGAFSSYKRLRRIDLSNNQISEIAPDAFHGLRSLNSL 358
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 180/454 (39%), Gaps = 90/454 (19%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G FA L ++TL +++N F+CDC L WL +L+ P +C +P
Sbjct: 407 SLYDNKIQTLAKGTFAPLKSIQTLHLAQNPFVCDCGLKWLADFLRSNPIETSGARCSSPR 466
Query: 64 HIKGQNILDIPEHEFKCSGPVEK---PTGE-------CAAEPSCPHPCRCADGIVDCREK 113
+ + I I +F+CS E+ P E C ++P CP CRC +VDC
Sbjct: 467 RLANKRISQIKSKKFRCSAAKEQYYIPGSEDTRMNKDCNSKPVCPPKCRCEATVVDCSNL 526
Query: 114 GLNKVPILLPEATTELRL-------------------------EQNDITELPPKAFANYK 148
L K P LP +TTELRL N ITE+ AF
Sbjct: 527 RLTKFPEHLPLSTTELRLNNNDLSILEATGLFRPLTHLKKINLSNNKITEIEDGAFEGAS 586
Query: 149 R------------------------LRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL 184
LR + L N I V +F GL+++ L+L +N L
Sbjct: 587 SVVELHLTANLLVSVRGGMFRGMDGLRMLMLRNNHIRCVHNSSFSGLQNVRLLSLYDNQL 646
Query: 185 TYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNI 244
+ + G F L L TL + N F CDC LSWL WL+ + +C P+ ++ +
Sbjct: 647 STIMPGAFDSLPNLSTLNLLANPFSCDCRLSWLGEWLRSRQIVTGNPRCQNPAFLREIPL 706
Query: 245 LDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADG 304
D+ + +F C +E C +P CP C C D
Sbjct: 707 QDVAKPDFICDKDVLEQDVS------------------------CIPKPQCPEQCTCVDS 742
Query: 305 IVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDI 364
+V C K L+ +P +P TEL +D + S + L N I
Sbjct: 743 VVRCSNKHLSALPRGVPLNVTEL-------YLDGNVFVSIPQELSAFRQLQLLDLSNNKI 795
Query: 365 TELPPKAFANYKRLRRIRLEQNDITELPPKAFAN 398
+ L +F N +L + L N + +PP F
Sbjct: 796 SSLTNTSFTNMSQLTTLILSYNALRCIPPLVFGG 829
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 151/325 (46%), Gaps = 34/325 (10%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L+ + G F L L TL + N F CDC LSWL WL+ + +C P+
Sbjct: 640 SLYDNQLSTIMPGAFDSLPNLSTLNLLANPFSCDCRLSWLGEWLRSRQIVTGNPRCQNPA 699
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ + +F C V + C +P CP C C D +V C K L+ +P +P
Sbjct: 700 FLREIPLQDVAKPDFICDKDVLEQDVSCIPKPQCPEQCTCVDSVVRCSNKHLSALPRGVP 759
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
TEL L+ N + P+ + +++L+ +DLS N+IS + +F + LT+L L+ N
Sbjct: 760 LNVTELYLDGNVFVSI-PQELSAFRQLQLLDLSNNKISSLTNTSFTNMSQLTTLILSYNA 818
Query: 184 LTYLPDGVFA--------------------ELFR----LRTLRISENSFICDCHLSWLHR 219
L +P VF ++FR L L I N CDC L WL
Sbjct: 819 LRCIPPLVFGGLSSLRLLSLHGNNISELHQQIFRDAASLSHLAIGANPLYCDCRLRWLSD 878
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
W+K + +C P ++G+ +L P + F+C+G + S +CS P +S
Sbjct: 879 WVKSGYKEPGIARCAGPQGMEGKLLLTTPGNTFQCTGPVDASVSG----KCS----PCSS 930
Query: 280 CPVEKPTGECAAEPSCPHPCRCADG 304
P + G C +P + C C G
Sbjct: 931 NPCQN-QGRCHNDPLHQYKCSCPQG 954
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 55/113 (48%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDC VP +P+ T L L N++T + FA K LR + L
Sbjct: 30 ACPPHCSCTGSTVDCHGLAFKSVPRNIPKTTERLDLNANNLTHIGKDDFAGLKHLRILHL 89
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
NQI + AF LK L L LN N L LP+ +F + L L +SEN+
Sbjct: 90 MDNQIVSIDRGAFSDLKELDRLRLNRNRLQQLPELLFLKNPALSRLDLSENNI 142
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C VDC VP +P+ T L ++ L ++F
Sbjct: 30 ACPPHCSCTGSTVDCHGLAFKSVPRNIPKTTERLD-------LNANNLTHIGKDDFAGLK 82
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ R L N I + AF++ K L R+RL +N + +LP F L R+
Sbjct: 83 HLRILHLMDNQIVSIDRGAFSDLKELDRLRLNRNRLQQLPELLFLKNPALSRL 135
>gi|147901337|ref|NP_001080578.1| slit homolog 1 precursor [Xenopus laevis]
gi|27924408|gb|AAH44982.1| Slit1 protein [Xenopus laevis]
Length = 1529
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 136/454 (29%), Positives = 217/454 (47%), Gaps = 74/454 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N+ CDCHL+W+ +WL++ P +GL+T+C P
Sbjct: 186 TLNNNNITTIPVSSFNHMPKLRTFRLHSNNLFCDCHLAWISQWLRQRPTIGLFTQCTGPP 245
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGE-CAAE-PSCPHPCRCADGIVDCREKGLNKVPIL 121
++G N+ +I +HEF CSG + T + C+ SCP C C++GI+DCR KGL +P
Sbjct: 246 PLRGLNVAEIQKHEFSCSGQSDPSTSQICSLSIGSCPAMCTCSNGIIDCRGKGLTAIPAN 305
Query: 122 LPEATTELRLE------------------------QNDITELPPKAFANYKRLRRIDLSK 157
LPE E+RLE N I+E+ P AF + L + L
Sbjct: 306 LPETMMEIRLELNGIKSVPPGAFSPYKKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYG 365
Query: 158 NQISK------------------------VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFA 193
N+I+ + D FQ L++L+ L+L +N + L G FA
Sbjct: 366 NKITDLPKGVFSGLHALQLLLLNANKINCIRADTFQDLQNLSLLSLYDNKIQSLAKGTFA 425
Query: 194 ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFK 253
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I +F+
Sbjct: 426 ALRAIQTLHLAQNPFICDCNLKWLSDFLRTNPIETSGARCASPRRLANKRIGQIKSKKFR 485
Query: 254 CSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL 313
CS + + + T+ + NS EC ++ CP CRC +VDC L
Sbjct: 486 CS-----AKEQYFIP--GTEDYQLNS--------ECNSDVVCPPKCRCESNVVDCSNLKL 530
Query: 314 NKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRR--LEQNDITELPPKA 371
K+P +P++T EL R++ + + + R ++ L N I+E+ A
Sbjct: 531 TKIPERIPQSTAEL-------RLNNNEIAALEATGLFRKLPHLKKINLSNNKISEIEDAA 583
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + + L N + + F + LR +
Sbjct: 584 FEGAASVSELHLTANHLESVRSGMFRGLEGLRTL 617
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 106/294 (36%), Positives = 151/294 (51%), Gaps = 55/294 (18%)
Query: 115 LNKVPILL---PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L+ +P LL +A + L L +N I +P K F L+ + + KNQIS + AF+ L
Sbjct: 120 LHTLPELLFQNNQALSRLDLSENLIQAIPRKTFRGATELKNLQMDKNQISCIEDGAFRAL 179
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T +P F + +LRT R+ N+ CDCHL+W+ +WL++ P +GL+T
Sbjct: 180 RGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNNLFCDCHLAWISQWLRQRPTIGLFT 239
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C P ++G N+ +I +HEF CSG S + S+I CS
Sbjct: 240 QCTGPPPLRGLNVAEIQKHEFSCSGQSDPSTSQI----CSLSIG---------------- 279
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++GI+DCR KGL +P LPE E+
Sbjct: 280 --SCPAMCTCSNGIIDCRGKGLTAIPANLPETMMEI------------------------ 313
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLE N I +PP AF+ YK+LRRI L N I+E+ P AF + L +
Sbjct: 314 ------RLELNGIKSVPPGAFSPYKKLRRIDLSNNQISEIAPDAFQGLRSLNSL 361
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 127/481 (26%), Positives = 201/481 (41%), Gaps = 109/481 (22%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G FA L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 410 SLYDNKIQSLAKGTFAALRAIQTLHLAQNPFICDCNLKWLSDFLRTNPIETSGARCASPR 469
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + EC ++ CP CRC +VDC
Sbjct: 470 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVVCPPKCRCESNVVDCSNLK 529
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L K+P +P++T ELRL N+I L F L++I+LS N+IS++ AF+G
Sbjct: 530 LTKIPERIPQSTAELRLNNNEIAALEATGLFRKLPHLKKINLSNNKISEIEDAAFEGAAS 589
Query: 171 ---------------------LKSLTSLTLNN------------------------NNLT 185
L+ L +L L N N ++
Sbjct: 590 VSELHLTANHLESVRSGMFRGLEGLRTLMLRNNRVSCVHNDSFTGLRNVRLLSLYDNQIS 649
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+C L+WL WL++ + +C P ++ +
Sbjct: 650 TITPGAFDTLQSLSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQ 709
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E CA +P CP C C D +
Sbjct: 710 DVAFPDFRCEEGQEEL--------------------------SCAPQPQCPQECTCLDTV 743
Query: 306 VDCREKGLNKVPILLPEATTEL-----------------TYMVSIDRVDKVLLYSYISNN 348
V C K L +P +P+ TEL Y+ +D + + S +SN+
Sbjct: 744 VRCSNKHLLSLPKGIPKNVTELYLDGNRFTMVPRQLSSFKYLQLVDLSNNKI--SSLSNS 801
Query: 349 FKRWTNRSRR----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRR 404
+TN S+ L N + +PP AF + LR + + NDI+ LP F++ L
Sbjct: 802 --SFTNMSQLTTLILSYNSLRCIPPLAFEGLQSLRLLSVHGNDISSLPEGIFSDVTSLSH 859
Query: 405 M 405
+
Sbjct: 860 L 860
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 143/277 (51%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N ++ + G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 642 SLYDNQISTITPGAFDTLQSLSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPD 701
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ + CA +P CP C C D +V C K L +P +P
Sbjct: 702 FLRQIPLQDVAFPDFRCEEGQEELS--CAPQPQCPQECTCLDTVVRCSNKHLLSLPKGIP 759
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVD----------------- 166
+ TEL L+ N T + P+ +++K L+ +DLS N+IS ++
Sbjct: 760 KNVTELYLDGNRFT-MVPRQLSSFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNS 818
Query: 167 -------AFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
AF+GL+SL L+++ N+++ LP+G+F+++ L L I N CDC+L WL
Sbjct: 819 LRCIPPLAFEGLQSLRLLSVHGNDISSLPEGIFSDVTSLSHLAIGANPLYCDCNLRWLSN 878
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + G+ +L P +F+C+G
Sbjct: 879 WVKTGYKEPGIARCTGPLEMDGKLLLTTPAKKFECNG 915
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 58/115 (50%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A CP C C+ VDC L VP +P +T L L N+IT + F+ K+LR
Sbjct: 28 AGANGCPALCTCSGTTVDCHGLALKGVPKNIPRSTERLELYGNNITRISKNDFSGLKQLR 87
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
+ L +NQIS V AF +K L L LN N L LP+ +F L L +SEN
Sbjct: 88 VLQLMENQISNVERGAFDDMKELERLRLNRNQLHTLPELLFQNNQALSRLDLSEN 142
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+++ N+++ LP+G+F+++ L L I N CDC+L WL W+K + +C P
Sbjct: 837 SVHGNDISSLPEGIFSDVTSLSHLAIGANPLYCDCNLRWLSNWVKTGYKEPGIARCTGPL 896
Query: 64 HIKGQNILDIPEHEFKCSGP----VEKPTGECAAEPSCPHPCRCADGIVD 109
+ G+ +L P +F+C+GP + C ++P C + C D V+
Sbjct: 897 EMDGKLLLTTPAKKFECNGPPGLNILAKCNPCLSDP-CQNQGTCQDDAVE 945
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELT-YMVSIDRVDKVLLYSYISNN 348
A CP C C+ VDC L VP +P +T L Y +I R+ K N+
Sbjct: 28 AGANGCPALCTCSGTTVDCHGLALKGVPKNIPRSTERLELYGNNITRISK--------ND 79
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F R +L +N I+ + AF + K L R+RL +N + LP F N + L R+
Sbjct: 80 FSGLKQLRVLQLMENQISNVERGAFDDMKELERLRLNRNQLHTLPELLFQNNQALSRL 137
>gi|350594431|ref|XP_003134124.3| PREDICTED: slit homolog 3 protein [Sus scrofa]
Length = 1789
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/306 (37%), Positives = 164/306 (53%), Gaps = 48/306 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 187 TLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFTLCMAPV 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ D+ + E+ C GP +P A SCP C C++ IVDCR KGL ++P LP
Sbjct: 247 HLRGFNVADVQKKEYVCPGPHSEPPSCNANSISCPSACTCSNNIVDCRGKGLTEIPANLP 306
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLT-------- 175
E E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLKSLT
Sbjct: 307 EGIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAADAFQGLKSLTSLVLYGNK 366
Query: 176 ----------------S------------------------LTLNNNNLTYLPDGVFAEL 195
L+L +N L + G+FA L
Sbjct: 367 ITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPL 426
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
++TL +++N F+CDCHL WL +L+ P +C +P + + I I +F+CS
Sbjct: 427 QAIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCS 486
Query: 256 GSSMET 261
G+ +
Sbjct: 487 GNQQQA 492
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/279 (32%), Positives = 133/279 (47%), Gaps = 54/279 (19%)
Query: 127 TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTY 186
T L L +N I +P KAF ++ + L N IS + AF+ L+ L LTLNNNN++
Sbjct: 136 TRLDLSENQILGIPRKAFRGIADVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISR 195
Query: 187 LPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILD 246
+ F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP H++G N+ D
Sbjct: 196 ILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFTLCMAPVHLRGFNVAD 255
Query: 247 IPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIV 306
+ + E+ C G P +P A SCP C C++ IV
Sbjct: 256 VQKKEYVCPG------------------------PHSEPPSCNANSISCPSACTCSNNIV 291
Query: 307 DCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITE 366
DCR KGL ++P LPE E+ RLEQN I
Sbjct: 292 DCRGKGLTEIPANLPEGIVEI------------------------------RLEQNSIKS 321
Query: 367 LPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+P AF YK+L+RI + +N I+++ AF K L +
Sbjct: 322 IPAGAFTQYKKLKRIDISKNQISDIAADAFQGLKSLTSL 360
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 134/276 (48%), Gaps = 26/276 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N ++ + G F L L T+ + N F C+CHL+WL +WL++ + +C P
Sbjct: 901 SLYDNRISTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPF 960
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C + +V C +GL +P +P
Sbjct: 961 FLKEIPIQDVAIQDFTCEGNDES---SCQLGPRCPEQCTCVETVVRCSNRGLRALPRGIP 1017
Query: 124 EATTELRLEQNDITELPPK-----------------------AFANYKRLRRIDLSKNQI 160
+ TEL LE N +T +P + F+N L + LS N++
Sbjct: 1018 KDVTELYLEGNHLTAVPRELSIFRHLTLIDLSNNSIGMLTNYTFSNMSHLSTLILSYNRL 1077
Query: 161 SKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW 220
+ + +F GL+SL LTL+ N+++ +P+G F +L L L + N CDC L WL W
Sbjct: 1078 RCIPIHSFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEW 1137
Query: 221 LKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
+K + +C +P + + +L P H F+C G
Sbjct: 1138 VKAGYKEPGIARCSSPEPMADRLLLTTPTHRFQCKG 1173
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 147/371 (39%), Gaps = 93/371 (25%)
Query: 101 CRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQ 159
CRC IVDC + L +VP LPE T+LRL N+I+ L F LR+I+LS N+
Sbjct: 775 CRCEGTIVDCSNQKLARVPSHLPEYVTDLRLNDNEISVLEATGVFKKLPNLRKINLSNNK 834
Query: 160 I------------------------------------------------SKVAVDAFQGL 171
I S V+ D F GL
Sbjct: 835 IKEVREGAFDGAASVQELMLTGNQLETVHGRMFRGLSGLKTLMLRSNLISCVSNDTFVGL 894
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
S+ L+L +N ++ + G F L L T+ + N F C+CHL+WL +WL++ +
Sbjct: 895 SSVRLLSLYDNRISTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNP 954
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C P +K I D+ +F C G+ + C
Sbjct: 955 RCQKPFFLKEIPIQDVAIQDFTCEGNDESS---------------------------CQL 987
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL----TYMVSIDRVDKVL----LYS 343
P CP C C + +V C +GL +P +P+ TEL ++ ++ R + L
Sbjct: 988 GPRCPEQCTCVETVVRCSNRGLRALPRGIPKDVTELYLEGNHLTAVPRELSIFRHLTLID 1047
Query: 344 YISNNFKRWTNRSRR---------LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPK 394
+N+ TN + L N + +P +F + LR + L NDI+ +P
Sbjct: 1048 LSNNSIGMLTNYTFSNMSHLSTLILSYNRLRCIPIHSFNGLRSLRVLTLHGNDISSVPEG 1107
Query: 395 AFANYKRLRRM 405
+F + L +
Sbjct: 1108 SFNDLTSLSHL 1118
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ VDC GL VP +P L +D+ + +F
Sbjct: 33 ACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLD-------LDRNNITRITKTDFAGLK 85
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R LE N ++ + AF + K+L R+RL +N + LP F + +L R+
Sbjct: 86 NLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSNPKLTRL 138
>gi|198437917|ref|XP_002124095.1| PREDICTED: similar to SLIT2 [Ciona intestinalis]
Length = 1517
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 139/452 (30%), Positives = 208/452 (46%), Gaps = 79/452 (17%)
Query: 4 TLNNNNLTYLPDGVF-AELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAP 62
TLNNNNL+++ V ++ LRTLR+ N C+CH++WL WL P + ++T+C P
Sbjct: 124 TLNNNNLSHVSPLVLRGKMPHLRTLRLHTNPIRCNCHMAWLADWLSDRPTMAVFTQCAEP 183
Query: 63 SHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILL 122
++G N+ EF C+ + C SCP C C++GI DCR++GL +P
Sbjct: 184 ISLRGLNLASADRSEFLCNEITAQRAPTCEIS-SCPSACICSNGIADCRDRGLTALPASF 242
Query: 123 PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLT---- 178
P TTELRLEQN I +P AFA+Y +LRRID+S N+I ++ DAF GL LTSL
Sbjct: 243 PLDTTELRLEQNRIQLIPSFAFASYPQLRRIDISNNEIREIERDAFDGLTQLTSLVIYGN 302
Query: 179 --------------------LNNNNLTYL------------------------PDGVFAE 194
LN N LT L G F+
Sbjct: 303 RISSLPAGIFRDLRNLQMLLLNANKLTCLRRDVFNGLRSLTLLSLYDNKLQSISRGTFSN 362
Query: 195 LFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
L + T+ +++N FICDCHL WL ++K+Y +C P + + I +C
Sbjct: 363 LKSIETMHLAQNPFICDCHLRWLVSYVKKYKVETSGARCAGPRRMANKRISVAKTRRMRC 422
Query: 255 SGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLN 314
+ SS T P EC E CP CRC +VDC +GL
Sbjct: 423 TDSSSLT----------------------GPAAECIPEAECPSQCRCEGSVVDCSRQGLV 460
Query: 315 KVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPPKAFA 373
+P +P +EL ++S +R++ + Y FK+ N + L N + + +F+
Sbjct: 461 TIPDNIPPYASEL--ILSHNRIEMITSVGY----FKKLRNLKKIDLSNNQLAAIEDGSFS 514
Query: 374 NYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + + L N +++L F+ LR +
Sbjct: 515 GAESVLELWLNDNVLSDLRGSMFSGLHNLRTL 546
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 124/473 (26%), Positives = 195/473 (41%), Gaps = 96/473 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L + T+ +++N FICDCHL WL ++K+Y +C P
Sbjct: 346 SLYDNKLQSISRGTFSNLKSIETMHLAQNPFICDCHLRWLVSYVKKYKVETSGARCAGPR 405
Query: 64 HIKGQNILDIPEHEFKC--SGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPIL 121
+ + I +C S + P EC E CP CRC +VDC +GL +P
Sbjct: 406 RMANKRISVAKTRRMRCTDSSSLTGPAAECIPEAECPSQCRCEGSVVDCSRQGLVTIPDN 465
Query: 122 LPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG---------- 170
+P +EL L N I + F + L++IDLS NQ++ + +F G
Sbjct: 466 IPPYASELILSHNRIEMITSVGYFKKLRNLKKIDLSNNQLAAIEDGSFSGAESVLELWLN 525
Query: 171 --------------LKSLTSLTLNNNNL------------------------TYLPDGVF 192
L +L +L + NN+L T + G F
Sbjct: 526 DNVLSDLRGSMFSGLHNLRTLLIRNNHLSCIGNHTFAGLSTVRHLALYSNQITTILSGAF 585
Query: 193 AELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
+ + L TL + N C+CHLSWL WL++ +C P ++ + DI +F
Sbjct: 586 STMTSLSTLNLLSNPLDCNCHLSWLSTWLRQSHVASGNPRCAEPRFLREFPVADINPRDF 645
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
+CS + E R+ PT C CP C C IV C G
Sbjct: 646 RCS-TDHEARA--------------------APT--CLPVQKCPEQCTCEGTIVRCANAG 682
Query: 313 LNKVPI------------------LLPEATTELTYMVSIDRVDKVL--LYSYISNNFKRW 352
L VP+ +P A + Y+ ++D + L + ++ +N R
Sbjct: 683 LTSVPVDDIPHDVTELYLEMNDIREIPVAIKKFIYLTTLDLSNNELASVSDWMFSNLTRL 742
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L N + +PPKAFA + LR + L N+++ LP AF + L +
Sbjct: 743 S--TLLLAYNRLRCIPPKAFAGLRSLRILSLHSNELSSLPEGAFNDLTSLSHV 793
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 151/335 (45%), Gaps = 80/335 (23%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP+ C C V C + L +P +P+ T L L +N+IT++ + LR++ L
Sbjct: 18 ACPNECVCRGKTVTCTGRSLTYIPRNIPQVTERLELHRNNITQITRNDLSGLTHLRKLYL 77
Query: 156 SKNQISKVAVDAFQGLKSLTS------------------------LTLNNNNLTYLPDGV 191
+N+I+ + AFQGL SL + LTLNNNNL+++ V
Sbjct: 78 QQNKITTIDDHAFQGLSSLRTLQLDQNMINCIQDQTFRPLRSLEVLTLNNNNLSHVSPLV 137
Query: 192 F-AELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEH 250
++ LRTLR+ N C+CH++WL WL P + ++T+C P ++G N+
Sbjct: 138 LRGKMPHLRTLRLHTNPIRCNCHMAWLADWLSDRPTMAVFTQCAEPISLRGLNLASADRS 197
Query: 251 EFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCRE 310
EF C+ + + PT E + SCP C C++GI DCR+
Sbjct: 198 EFLCNEITAQ----------------------RAPTCEIS---SCPSACICSNGIADCRD 232
Query: 311 KGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPK 370
+GL +P P TTEL RLEQN I +P
Sbjct: 233 RGLTALPASFPLDTTEL------------------------------RLEQNRIQLIPSF 262
Query: 371 AFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
AFA+Y +LRRI + N+I E+ AF +L +
Sbjct: 263 AFASYPQLRRIDISNNEIREIERDAFDGLTQLTSL 297
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 128/277 (46%), Gaps = 25/277 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L +N +T + G F+ + L TL + N C+CHLSWL WL++ +C P
Sbjct: 572 LYSNQITTILSGAFSTMTSLSTLNLLSNPLDCNCHLSWLSTWLRQSHVASGNPRCAEPRF 631
Query: 65 IKGQNILDIPEHEFKCSGPVE-KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPIL-L 122
++ + DI +F+CS E + C CP C C IV C GL VP+ +
Sbjct: 632 LREFPVADINPRDFRCSTDHEARAAPTCLPVQKCPEQCTCEGTIVRCANAGLTSVPVDDI 691
Query: 123 PEATTELRLEQNDITELPPK-----------------------AFANYKRLRRIDLSKNQ 159
P TEL LE NDI E+P F+N RL + L+ N+
Sbjct: 692 PHDVTELYLEMNDIREIPVAIKKFIYLTTLDLSNNELASVSDWMFSNLTRLSTLLLAYNR 751
Query: 160 ISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
+ + AF GL+SL L+L++N L+ LP+G F +L L + N + CDC+L W +
Sbjct: 752 LRCIPPKAFAGLRSLRILSLHSNELSSLPEGAFNDLTSLSHVGFGANPWYCDCNLRWFSQ 811
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K +C AP + G+ +L F C G
Sbjct: 812 WVKSDFFEAGIARCSAPPRMAGRLLLSSSLETFVCRG 848
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L++N L+ LP+G F +L L + N + CDC+L W +W+K +C AP
Sbjct: 770 SLHSNELSSLPEGAFNDLTSLSHVGFGANPWYCDCNLRWFSQWVKSDFFEAGIARCSAPP 829
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ G+ +L F C GP++
Sbjct: 830 RMAGRLLLSSSLETFVCRGPLD 851
>gi|402869041|ref|XP_003898583.1| PREDICTED: slit homolog 2 protein [Papio anubis]
Length = 1336
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 137/435 (31%), Positives = 204/435 (46%), Gaps = 71/435 (16%)
Query: 23 RLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 82
+LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++ + EF CS
Sbjct: 3 KLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQKREFVCSD 62
Query: 83 PVEKPTGECAAEPS---CPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQN----- 134
E A S CP C C++ IVDCR KGL ++P LPE TE+RLEQN
Sbjct: 63 EEEGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVI 122
Query: 135 -------------------DITELPPKAFANYKRLRRIDLSKNQISKVA----------- 164
I+EL P AF + L + L N+I+++
Sbjct: 123 PPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQ 182
Query: 165 -------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICD 211
VDAFQ L +L L+L +N L + G F+ L ++T+ +++N FICD
Sbjct: 183 LLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 242
Query: 212 CHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECS 271
CHL WL +L P +C +P + + I I +F+CS
Sbjct: 243 CHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSAKEQY----------- 291
Query: 272 TDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV 331
F P K +G+C A+ +CP CRC VDC + LNK+P +P+ T EL
Sbjct: 292 --FIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPEHIPQYTAEL---- 345
Query: 332 SIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITE 390
++ + +L + + FK+ R N IT++ AF + I L N +
Sbjct: 346 RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLEN 403
Query: 391 LPPKAFANYKRLRRM 405
+ K F + L+ +
Sbjct: 404 VQHKMFKGLESLKTL 418
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 131/481 (27%), Positives = 202/481 (41%), Gaps = 107/481 (22%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 209 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 268
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K +G+C A+ +CP CRC VDC
Sbjct: 269 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSN 328
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG- 170
+ LNK+P +P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 329 QKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGA 388
Query: 171 -----------------------LKSLTS------------------------LTLNNNN 183
L+SL + L+L +N
Sbjct: 389 SGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQ 448
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N F C+C+L+WL WL++ + +C P +K
Sbjct: 449 ITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIP 508
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCA 302
I D+ +F C D + NSC P+ + CP C C
Sbjct: 509 IQDVAIQDFTCD-----------------DGNDDNSCSPLSR----------CPTECTCL 541
Query: 303 DGIVDCREKGLNKVPILLPEATTELTYMVS---------IDRVDKVLLYSYISNNFKRWT 353
D +V C KGL +P +P TEL Y+ + + L +N +
Sbjct: 542 DTVVRCSNKGLKVLPKGIPRDVTEL-YLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLS 600
Query: 354 NRSRR---------LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRR 404
N+S L N + +PP+ F K LR + L NDI+ +P AF + L
Sbjct: 601 NQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISAVPEGAFNDLSALSH 660
Query: 405 M 405
+
Sbjct: 661 L 661
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 443 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 502
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 503 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPTECTCLDTVVRCSNKGLKVLPKGIP 560
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 561 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 619
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 620 LRCIPPRTFDGLKSLRLLSLHGNDISAVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 679
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 680 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 716
>gi|351712067|gb|EHB14986.1| Slit-like protein 1 protein [Heterocephalus glaber]
Length = 1484
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 144/458 (31%), Positives = 214/458 (46%), Gaps = 103/458 (22%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRTL+ P +GL+T+C P+
Sbjct: 158 TLNNNNITMIPVSSFNHMPKLRTLQ---------------------RPTIGLFTQCSGPA 196
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEP-------SCPHPCRCADGIVDCREKGLN 116
++G N+ ++ + EF CSG GE P SCP C C++GIVDCR KGL
Sbjct: 197 SLRGLNVAEVQKSEFSCSG-----QGEAGHVPACTLSLGSCPAMCACSNGIVDCRGKGLT 251
Query: 117 KVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
+P LPE TE+RLE N I +PP AF+ Y++LRRIDLS NQI+++A DAFQGL+SL S
Sbjct: 252 AIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNS 311
Query: 177 LTLNNNNLTYLPDGVFA------------------------------------------- 193
L L N +T LP GVF
Sbjct: 312 LVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLA 371
Query: 194 -----ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I
Sbjct: 372 KGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLTNKRIGQIK 431
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+F+CS Y + D+ NS EC+ + +CPH CRC +V+C
Sbjct: 432 SKKFRCSAKEQ------YFIPGTEDYQ-LNS--------ECSIDVACPHKCRCEASVVEC 476
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITEL 367
L+K+P +P++T EL ++ + LL + + FK+ T+ + L N ++E+
Sbjct: 477 SSLRLSKIPERIPQSTAEL----RLNNNEISLLEA--TGMFKKLTHLKKINLSNNKVSEI 530
Query: 368 PPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F + + L N + + F LR +
Sbjct: 531 EDGTFEGAASVSELHLTANQLESIRSGMFRGLDGLRTL 568
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 190/451 (42%), Gaps = 91/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 361 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPR 420
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + EC+ + +CPH CRC +V+C
Sbjct: 421 RLTNKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECSIDVACPHKCRCEASVVECSSLR 480
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L+K+P +P++T ELRL N+I+ L F L++I+LS N++S++ F+G
Sbjct: 481 LSKIPERIPQSTAELRLNNNEISLLEATGMFKKLTHLKKINLSNNKVSEIEDGTFEGAAS 540
Query: 171 ---------------------LKSLTSLTLNN------------------------NNLT 185
L L +L L N N++T
Sbjct: 541 VSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHIT 600
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+C L+WL WL++ + +C P ++ +
Sbjct: 601 TISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQ 660
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E G C P CP C C D +
Sbjct: 661 DVAFPDFRCEEGQEE--------------------------GGCLPRPQCPQECACLDTV 694
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L +P +P+ TEL +D L+ +S FK + L N I+
Sbjct: 695 VRCSNKHLRALPKGIPKNVTELY----LDGNQFTLVPGQLS-TFKYL--QLVDLSNNKIS 747
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L +F N +L + L N + +PP AF
Sbjct: 748 SLSNSSFTNMSQLTTLILSYNALQCIPPLAF 778
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N++T + G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 593 SLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPD 652
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ G C P CP C C D +V C K L +P +P
Sbjct: 653 FLRQIPLQDVAFPDFRCEEGQEE--GGCLPRPQCPQECACLDTVVRCSNKHLRALPKGIP 710
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TEL L+ N T L P + +K L+ +DLS N+IS ++ +F + LT+L L+ N
Sbjct: 711 KNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 769
Query: 184 LTYLP------------------------DGVFAELFRLRTLRISENSFICDCHLSWLHR 219
L +P +G+FA++ L L I N CDCHL WL
Sbjct: 770 LQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSN 829
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 830 WVKTGYKEPGIARCTGPPDMEGKLLLTTPAKKFECQG 866
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 124/277 (44%), Gaps = 73/277 (26%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L +N + +P KAF L+ + L KNQIS + AF+ L+ L LTLNNNN+T +P
Sbjct: 109 LDLSENALQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITMIP 168
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F + +LRTL + P +GL+T+C P+ ++G N+ ++
Sbjct: 169 VSSFNHMPKLRTL---------------------QRPTIGLFTQCSGPASLRGLNVAEVQ 207
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ EF CSG + C+ SCP C C++GIVDC
Sbjct: 208 KSEFSCSGQGEAG----HVPACTLSLG------------------SCPAMCACSNGIVDC 245
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R KGL +P LPE TE+ RLE N I +P
Sbjct: 246 RGKGLTAIPANLPETMTEI------------------------------RLELNGIKSIP 275
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF+ Y++LRRI L N I E+ P AF + L +
Sbjct: 276 PGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSL 312
>gi|77993302|ref|NP_001030140.1| slit homolog 1 protein precursor [Danio rerio]
gi|74273691|gb|ABA01500.1| Slit1a [Danio rerio]
Length = 1524
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 135/453 (29%), Positives = 210/453 (46%), Gaps = 96/453 (21%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ +P F + +LRT R+ N+ +CDC LSWL +WL+ P +GL+T+C +P+
Sbjct: 180 TLNNNNISSIPVSSFNHMPKLRTFRLHSNNLVCDCVLSWLSQWLRERPNIGLFTQCSSPA 239
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGE-CA-AEPSCPHPCRCADGIVDCREKGLNKVPIL 121
++G N+ ++ +HEF CSG + G+ C+ + SCP C C + IVDCR KG +P
Sbjct: 240 PLRGLNVAEVQKHEFSCSGQSDSAVGQSCSLSSGSCPAVCSCNNNIVDCRGKGPTLIPSS 299
Query: 122 LPEATTELRLEQNDI------------------------TELPPKAFANYKRLRRIDLSK 157
LP++ TE+RLEQN I +EL P AF + L + L
Sbjct: 300 LPDSMTEIRLEQNSIKSIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 359
Query: 158 NQISKVA------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFA 193
N+I+ + + FQ L++L+ L+L +N + L G F+
Sbjct: 360 NKITDLPRGVFDGLHALQLLLLNANKIHCLRANTFQDLQNLSLLSLYDNKIQTLAKGTFS 419
Query: 194 ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFK 253
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I +F+
Sbjct: 420 SLRAIQTLHLAQNPFICDCNLKWLADYLRSNPIETSGARCTSPRRLANKRIGQIKSKKFR 479
Query: 254 CSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL 313
CS Y + D N +C +P CP CRC +VDC L
Sbjct: 480 CSAKEQ------YAIPGTEDSRLNN---------DCNNDPVCPAKCRCESNVVDCSNLRL 524
Query: 314 NKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPP-KAF 372
+++P +P +TTE RL N+IT + AF
Sbjct: 525 DRIPEHVPASTTE------------------------------PRLNNNEITTIEAMGAF 554
Query: 373 ANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L++I L N I+E+ AF + +
Sbjct: 555 KTLTHLKKINLSNNKISEIEDGAFEGASSVNEL 587
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 152/294 (51%), Gaps = 55/294 (18%)
Query: 115 LNKVPILLPE---ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L+++P LL + A + L L +N I +P KAF ++ + L KN IS + AF+ +
Sbjct: 114 LHQLPELLFQKNAALSRLDLSENFIQAIPRKAFRGATDIKNLQLDKNHISCIEDGAFRAM 173
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ +P F + +LRT R+ N+ +CDC LSWL +WL+ P +GL+T
Sbjct: 174 RGLEVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNNLVCDCVLSWLSQWLRERPNIGLFT 233
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C +P+ ++G N+ ++ +HEF CSG S D SC + +
Sbjct: 234 QCSSPAPLRGLNVAEVQKHEFSCSGQS--------------DSAVGQSCSL--------S 271
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C + IVDCR KG +P LP++ TE+
Sbjct: 272 SGSCPAVCSCNNNIVDCRGKGPTLIPSSLPDSMTEI------------------------ 307
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +PP AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 308 ------RLEQNSIKSIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 355
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 122/477 (25%), Positives = 192/477 (40%), Gaps = 101/477 (21%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F+ L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 404 SLYDNKIQTLAKGTFSSLRAIQTLHLAQNPFICDCNLKWLADYLRSNPIETSGARCTSPR 463
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + +C +P CP CRC +VDC
Sbjct: 464 RLANKRIGQIKSKKFRCSAKEQYAIPGTEDSRLNNDCNNDPVCPAKCRCESNVVDCSNLR 523
Query: 115 LNKVPILLPEATTE-------------------------LRLEQNDITELPPKAFANYKR 149
L+++P +P +TTE + L N I+E+ AF
Sbjct: 524 LDRIPEHVPASTTEPRLNNNEITTIEAMGAFKTLTHLKKINLSNNKISEIEDGAFEGASS 583
Query: 150 LRRIDLSKNQ------------------------ISKVAVDAFQGLKSLTSLTLNNNNLT 185
+ + L+ NQ IS + ++F GL ++ L+L +N LT
Sbjct: 584 VNELHLTANQLDLAHSGMFRGLEGLRMLMLRNNRISCIHNNSFTGLHNVRLLSLYDNTLT 643
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+C L+WL WL+ + +C P+ +K +
Sbjct: 644 TIAPGAFDTLQSLSTLNLLANPFNCNCRLAWLSSWLRNRKIVTGNPRCHRPAFLKEIPLQ 703
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C D H S CA CP C C + +
Sbjct: 704 DVAAPDFRCE-----------------DDHEDVS---------CAPPVHCPADCTCLESV 737
Query: 306 VDCREKGLNKVPILLPEATTEL--------TYMVSIDRVDKVLLYSYISNNFKRWTNRSR 357
V C K L +P P TEL T + + L +N TN S
Sbjct: 738 VRCSNKHLQALPKGTPRNITELYLDGNQLSTVPKELSSFKSLQLVDLSNNRISSLTNSSF 797
Query: 358 R---------LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P AF+ + LR + L NDI+ELP F++ + L +
Sbjct: 798 TNMSQLTTLILSYNALRCIPTLAFSGLRSLRLLSLHGNDISELPDGIFSDAQSLSHL 854
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 153/326 (46%), Gaps = 36/326 (11%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N LT + G F L L TL + N F C+C L+WL WL+ + +C P+
Sbjct: 636 SLYDNTLTTIAPGAFDTLQSLSTLNLLANPFNCNCRLAWLSSWLRNRKIVTGNPRCHRPA 695
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K + D+ +F+C E + CA CP C C + +V C K L +P P
Sbjct: 696 FLKEIPLQDVAAPDFRCEDDHEDVS--CAPPVHCPADCTCLESVVRCSNKHLQALPKGTP 753
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN--- 180
TEL L+ N ++ +P K +++K L+ +DLS N+IS + +F + LT+L L+
Sbjct: 754 RNITELYLDGNQLSTVP-KELSSFKSLQLVDLSNNRISSLTNSSFTNMSQLTTLILSYNA 812
Query: 181 ---------------------NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
N+++ LPDG+F++ L L I N CDC L WL
Sbjct: 813 LRCIPTLAFSGLRSLRLLSLHGNDISELPDGIFSDAQSLSHLAIGANPLHCDCGLRWLSD 872
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
W+K + +C +P ++G+ +L P F+C G E S I + +P S
Sbjct: 873 WVKTGYKEPGIARCASPHGMEGKLLLTTPAKRFECQG---EVDSAILAK-----CNPCAS 924
Query: 280 CPVEKPTGECAAEPSCPHPCRCADGI 305
P G C A+ + + CRCADG
Sbjct: 925 GPCLH-QGVCEADQTDSYRCRCADGF 949
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 56/116 (48%)
Query: 91 CAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRL 150
C CP C C+ VDC GL +P +P T L L N++T + F K L
Sbjct: 21 CKTGSGCPALCTCSGTTVDCHGLGLKNIPRNIPRNTERLELNGNNLTRINRNDFTGLKYL 80
Query: 151 RRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
R + L +NQI V AF ++ L L LN N L LP+ +F + L L +SEN
Sbjct: 81 RVLQLMENQIVTVERGAFDEMRELERLRLNRNQLHQLPELLFQKNAALSRLDLSEN 136
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 50/121 (41%), Gaps = 14/121 (11%)
Query: 289 CAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTY----MVSIDRVDKVLLYSY 344
C CP C C+ VDC GL +P +P T L + I+R D L Y
Sbjct: 21 CKTGSGCPALCTCSGTTVDCHGLGLKNIPRNIPRNTERLELNGNNLTRINRNDFTGL-KY 79
Query: 345 ISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRR 404
+ R +L +N I + AF + L R+RL +N + +LP F L R
Sbjct: 80 L---------RVLQLMENQIVTVERGAFDEMRELERLRLNRNQLHQLPELLFQKNAALSR 130
Query: 405 M 405
+
Sbjct: 131 L 131
>gi|327279089|ref|XP_003224291.1| PREDICTED: slit homolog 1 protein-like [Anolis carolinensis]
Length = 1529
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 136/453 (30%), Positives = 218/453 (48%), Gaps = 72/453 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL WL +WL++ P +GL+T+C P
Sbjct: 182 TLNNNNITTIPISSFNHMPKLRTFRLHSNQLFCDCHLGWLSQWLRQRPTIGLFTQCAGPP 241
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGE-CA-AEPSCPHPCRCADGIVDCREKGLNKVPIL 121
++G N+ +I ++EF C+G + + C+ + SCP C C++GIVDCR KGL +P
Sbjct: 242 ALRGLNVAEIQKNEFTCTGQDDATRAQICSFSSGSCPAMCTCSNGIVDCRGKGLTAIPAN 301
Query: 122 LPEATTELRLE------------------------QNDITELPPKAFANYKRLRRIDLSK 157
LPE TE+RLE N I+EL P AF + L + L
Sbjct: 302 LPETMTEIRLELNGIKSIPPGAFSSYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 361
Query: 158 NQISK------------------------VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFA 193
N+I++ + D F L++L+ L+L +N + L G F
Sbjct: 362 NKITELPKGVFGGLYALQLLLLNANKINCIRADTFADLQNLSLLSLYDNKIQTLAKGTFT 421
Query: 194 ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFK 253
L ++TL +++N FICDC+L WL +L+ P +C +P + + I I +F+
Sbjct: 422 TLRAIQTLHLAQNPFICDCNLKWLADFLRANPIETSGARCASPRRLANKRIGQIKSKKFR 481
Query: 254 CSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL 313
CS + + + T+ + NS EC ++ CP CRC +V+C L
Sbjct: 482 CS-----PKEQYFIP--GTEDYQLNS--------ECHSDVVCPPKCRCEANVVECSNLKL 526
Query: 314 NKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPPKAF 372
K+P LP+AT EL ++ + +L + + FK+ + + L N ++E+ AF
Sbjct: 527 TKIPERLPQATAEL----RLNNNEITVLEA--TGIFKKLPHLKKINLSNNKVSEIEDGAF 580
Query: 373 ANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L N + + F + LR +
Sbjct: 581 EGAASVSELHLTANQLDSVRSSMFRGLEGLRTL 613
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 152/294 (51%), Gaps = 55/294 (18%)
Query: 115 LNKVPILL---PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L+ +P LL +A + L L +N + +P KAF L+ + L KN IS + AF+ L
Sbjct: 116 LHTLPELLFQNNQALSRLDLSENLLQAVPRKAFRGATDLKNLQLDKNHISCIEEGAFRAL 175
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN+T +P F + +LRT R+ N CDCHL WL +WL++ P +GL+T
Sbjct: 176 RGLEVLTLNNNNITTIPISSFNHMPKLRTFRLHSNQLFCDCHLGWLSQWLRQRPTIGLFT 235
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C P ++G N+ +I ++EF C+G TR++I CS +
Sbjct: 236 QCAGPPALRGLNVAEIQKNEFTCTGQDDATRAQI----CS------------------FS 273
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++GIVDCR KGL +P LPE TE+
Sbjct: 274 SGSCPAMCTCSNGIVDCRGKGLTAIPANLPETMTEI------------------------ 309
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLE N I +PP AF++YK+LRRI L N I+EL P AF + L +
Sbjct: 310 ------RLELNGIKSIPPGAFSSYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 357
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 123/452 (27%), Positives = 189/452 (41%), Gaps = 93/452 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 406 SLYDNKIQTLAKGTFTTLRAIQTLHLAQNPFICDCNLKWLADFLRANPIETSGARCASPR 465
Query: 64 HIKGQNILDIPEHEFKCSGPVEK----------PTGECAAEPSCPHPCRCADGIVDCREK 113
+ + I I +F+CS P E+ EC ++ CP CRC +V+C
Sbjct: 466 RLANKRIGQIKSKKFRCS-PKEQYFIPGTEDYQLNSECHSDVVCPPKCRCEANVVECSNL 524
Query: 114 GLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG-- 170
L K+P LP+AT ELRL N+IT L F L++I+LS N++S++ AF+G
Sbjct: 525 KLTKIPERLPQATAELRLNNNEITVLEATGIFKKLPHLKKINLSNNKVSEIEDGAFEGAA 584
Query: 171 ----------------------LKSLTSLTLNN------------------------NNL 184
L+ L +L L N N +
Sbjct: 585 SVSELHLTANQLDSVRSSMFRGLEGLRTLMLRNNRINCIHNDSFTGLRNVRLLSLYDNQI 644
Query: 185 TYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNI 244
+ + G F L L TL + N F C+C L+WL WL++ + +C P ++ +
Sbjct: 645 STISPGAFDTLQSLSTLNLLANPFNCNCRLAWLGDWLRKRKIVTGNPRCHNPDFLRQIPL 704
Query: 245 LDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADG 304
D+ +F+C ET C P CP C C D
Sbjct: 705 QDVAFPDFRCEEGQEET--------------------------SCFPRPQCPQECTCLDT 738
Query: 305 IVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDI 364
+V C K L +P +P+ TEL +D L+ +S F+ + L N I
Sbjct: 739 VVRCSNKHLKALPKGIPKNVTELY----LDGNQFTLVPGQLS-TFRYL--QLVDLSNNKI 791
Query: 365 TELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
+ L +F N +L + L N + +PP AF
Sbjct: 792 SSLSNSSFTNMSQLTTLILSYNALQCIPPLAF 823
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 136/275 (49%), Gaps = 27/275 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N ++ + G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 638 SLYDNQISTISPGAFDTLQSLSTLNLLANPFNCNCRLAWLGDWLRKRKIVTGNPRCHNPD 697
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ + C P CP C C D +V C K L +P +P
Sbjct: 698 FLRQIPLQDVAFPDFRCEEGQEETS--CFPRPQCPQECTCLDTVVRCSNKHLKALPKGIP 755
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN--- 180
+ TEL L+ N T L P + ++ L+ +DLS N+IS ++ +F + LT+L L+
Sbjct: 756 KNVTELYLDGNQFT-LVPGQLSTFRYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 814
Query: 181 ---------------------NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
N+++ LP+G+FA++ L L I N CDCH+ WL
Sbjct: 815 LQCIPPLAFEGLRSLRLLSLHGNDVSMLPEGIFADVTSLSHLAIGANPLYCDCHMRWLSG 874
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
W+K + +C P+ ++G+ +L P +F+C
Sbjct: 875 WVKTGYKEPGIARCAGPTDMEGKLLLTTPAKKFEC 909
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 57/115 (49%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
+ +CP C C+ VDC GL VP +P L L N+IT + FA K+LR
Sbjct: 24 SGASACPALCACSGTTVDCHGLGLRAVPKNIPRGAERLELNGNNITRINKHDFAGLKQLR 83
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
+ L +NQIS V F +K L L LN N L LP+ +F L L +SEN
Sbjct: 84 VLQLMENQISVVERGVFDDMKELERLRLNRNQLHTLPELLFQNNQALSRLDLSEN 138
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNN 348
+ +CP C C+ VDC GL VP +P L + I R++K ++
Sbjct: 24 SGASACPALCACSGTTVDCHGLGLRAVPKNIPRGAERLELNGNNITRINK--------HD 75
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F R +L +N I+ + F + K L R+RL +N + LP F N + L R+
Sbjct: 76 FAGLKQLRVLQLMENQISVVERGVFDDMKELERLRLNRNQLHTLPELLFQNNQALSRL 133
>gi|297295684|ref|XP_002808486.1| PREDICTED: LOW QUALITY PROTEIN: slit homolog 3 protein-like [Macaca
mulatta]
Length = 1388
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 130/386 (33%), Positives = 193/386 (50%), Gaps = 52/386 (13%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 132 TLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFTLCMAPV 191
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ D+ + E+ C P +P A SCP PC C++ IVDCR KGL ++P LP
Sbjct: 192 HLRGFNVADVQKKEYVCPAPHSEPPSCNANSISCPSPCTCSNNIVDCRGKGLTEIPANLP 251
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E I L+ N+I+ + V+ FQ L++L L+L +N
Sbjct: 252 EGIVE------------------------ILLNANKINCLRVNTFQDLQNLNLLSLYDNK 287
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P + +
Sbjct: 288 LQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKR 347
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
I I +F+CSGS + RS+ + EC + CP CRC
Sbjct: 348 ISQIKSKKFRCSGSE-DYRSRF--------------------SSECFMDLVCPEKCRCEG 386
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQN 362
IVDC + L ++P LPE T+L D VL + I FK+ N R L N
Sbjct: 387 TIVDCSNQKLARIPSHLPEYVTDLRLN---DNEISVLEATGI---FKKLPNLRKINLSNN 440
Query: 363 DITELPPKAFANYKRLRRIRLEQNDI 388
I E+ AF R++ + L N +
Sbjct: 441 KIKEVXEGAFDGAARVQELMLTGNQL 466
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 129/463 (27%), Positives = 201/463 (43%), Gaps = 88/463 (19%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 282 SLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 341
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + + + EC + CP CRC IVDC + L ++P
Sbjct: 342 RLANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLARIPS 401
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQI------------------- 160
LPE T+LRL N+I+ L F LR+I+LS N+I
Sbjct: 402 HLPEYVTDLRLNDNEISVLEATGIFKKLPNLRKINLSNNKIKEVXEGAFDGAARVQELML 461
Query: 161 ---------------------SKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLR 199
S V+ D F GL S+ L+L +N +T + G F L L
Sbjct: 462 TGNQLETKXXXXXXMLRSNSISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLS 521
Query: 200 TLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSM 259
T+ + N F C+CHL+WL +WL++ + +C P +K I D+ +F C G+
Sbjct: 522 TINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCDGNDE 581
Query: 260 ETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPIL 319
+ C P CP C C + +V C KGL +P
Sbjct: 582 SS---------------------------CQLSPRCPEQCTCVETVVRCSNKGLRALPKG 614
Query: 320 LPEATTEL----TYMVSIDRVDKVL----LYSYISNNFKRWTNRSRR---------LEQN 362
+P+ TEL ++ ++ R L L +N+ TN + L N
Sbjct: 615 MPKDVTELYLEGNHLTAVPRELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYN 674
Query: 363 DITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ +P AF + LR + L NDI+ +P +F + L +
Sbjct: 675 RLRCIPIHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHL 717
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 134/277 (48%), Gaps = 28/277 (10%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CHL+WL +WL++ + +C P
Sbjct: 500 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPF 559
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C + +V C KGL +P +P
Sbjct: 560 FLKEIPIQDVAIQDFTCDGNDES---SCQLSPRCPEQCTCVETVVRCSNKGLRALPKGMP 616
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISK--------------------- 162
+ TEL LE N +T +P + + + L IDLS N IS
Sbjct: 617 KDVTELYLEGNHLTAVP-RELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNR 675
Query: 163 ---VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
+ + AF GL+SL LTL+ N+++ +P+G F +L L L + N CDC L WL
Sbjct: 676 LRCIPIHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSE 735
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C +P + + +L P H F+C G
Sbjct: 736 WVKAGYKEPGIARCSSPEPMADRLLLTTPTHRFQCKG 772
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 139/276 (50%), Gaps = 35/276 (12%)
Query: 115 LNKVPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL ++T T L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 66 LQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRAL 125
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T
Sbjct: 126 RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFT 185
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
C AP H++G N+ D+ + E+ C P +P A
Sbjct: 186 LCMAPVHLRGFNVADVQKKEYVCPA------------------------PHSEPPSCNAN 221
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP PC C++ IVDCR KGL ++P LPE E+ +++ ++++ + + N F+
Sbjct: 222 SISCPSPCTCSNNIVDCRGKGLTEIPANLPEGIVEI--LLNANKINCLRV-----NTFQD 274
Query: 352 WTNRS-RRLEQNDITELPPKAFANYKRLRRIRLEQN 386
N + L N + + FA + ++ + L QN
Sbjct: 275 LQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQN 310
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TL+ N+++ +P+G F +L L L + N CDC L WL W+K + +C +P
Sbjct: 694 TLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSSPE 753
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ + +L P H F+C GPV+
Sbjct: 754 PMADRLLLTTPTHRFQCKGPVD 775
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%)
Query: 131 LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDG 190
L++N+IT + FA K LR + L NQ+S + AFQ LK L L LN N L LP+
Sbjct: 13 LDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPEL 72
Query: 191 VFAELFRLRTLRISENSF 208
+F +L L +SEN
Sbjct: 73 LFQSTPKLTRLDLSENQI 90
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 154 DLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
DL +N I+++ F GLK+L L L +N ++ + G F +L +L LR+++N
Sbjct: 12 DLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKL 66
>gi|281342689|gb|EFB18273.1| hypothetical protein PANDA_004468 [Ailuropoda melanoleuca]
Length = 1326
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 132/427 (30%), Positives = 199/427 (46%), Gaps = 69/427 (16%)
Query: 28 RISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGPVEKP 87
R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++ + EF CSG
Sbjct: 1 RLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQKREFVCSGHQSFM 60
Query: 88 TGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDI----------- 136
C+ CP C C++ IVDCR KGL ++P LPE TE+RLEQN I
Sbjct: 61 APSCSVL-HCPAACTCSNNIVDCRGKGLPEIPTNLPETITEIRLEQNSIKVIPPGAFSPY 119
Query: 137 -------------TELPPKAFANYKRLRRIDLSKNQISKVA------------------- 164
+EL P AF + L + L N+I+++
Sbjct: 120 KKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANK 179
Query: 165 -----VDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
VDAFQ L +L L+L +N L + G F+ L ++T+ +++N FICDCHL WL
Sbjct: 180 INCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLAD 239
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
+L P +C +P + + I I +F+CS F P
Sbjct: 240 YLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSAKEQY-------------FIPGTE 286
Query: 280 CPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKV 339
K +G+C A+ +CP CRC VDC + L K+P +P+ T EL ++ +
Sbjct: 287 DYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLTKIPDHIPQYTAEL----RLNNNEFT 342
Query: 340 LLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFAN 398
+L + + FK+ R N IT++ AF + I L N + + K F
Sbjct: 343 VLEA--TGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKG 400
Query: 399 YKRLRRM 405
+ L+ +
Sbjct: 401 LESLKTL 407
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/479 (26%), Positives = 200/479 (41%), Gaps = 103/479 (21%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 198 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 257
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K +G+C A+ +CP CRC VDC
Sbjct: 258 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSN 317
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG- 170
+ L K+P +P+ T ELRL N+ T L F +LR+I+ S N+I+ + AF+G
Sbjct: 318 QKLTKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGA 377
Query: 171 -----------------------LKSLTS------------------------LTLNNNN 183
L+SL + L+L +N
Sbjct: 378 SGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQ 437
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N F C+C+L+WL WL++ + +C P +K
Sbjct: 438 ITTIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIP 497
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
I D+ +F C + ++ C+ CP C C D
Sbjct: 498 IQDVAIQDFTCDDGNDDS--------------------------SCSPLSRCPAECTCLD 531
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSY-------ISNN-FKRWTNR 355
+V C K L +P +P TEL + + LY+Y +SNN +N+
Sbjct: 532 TVVRCSNKALKVLPKGIPRDVTELYLDGNQFTLVPKELYNYKHLTLIDLSNNRISTLSNQ 591
Query: 356 SRR---------LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
S L N + +PP+ F K LR + L NDI+ +P AF + L +
Sbjct: 592 SFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHL 650
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 131/277 (47%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 432 SLYDNQITTIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 491
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C K L +P +P
Sbjct: 492 FLKEIPIQDVAIQDFTCDDGNDDSS--CSPLSRCPAECTCLDTVVRCSNKALKVLPKGIP 549
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK NYK L IDLS N+IS ++ +F
Sbjct: 550 RDVTELYLDGNQFT-LVPKELYNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 608
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 609 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 668
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 669 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 705
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L+ N+++ +P+G F +L L L I N CDC++ WL W+K + +C P
Sbjct: 627 SLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPG 686
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ + +L P +F C GPV+
Sbjct: 687 EMADKLLLTTPSKKFTCQGPVD 708
>gi|348533313|ref|XP_003454150.1| PREDICTED: slit homolog 1 protein-like [Oreochromis niloticus]
Length = 1572
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 136/444 (30%), Positives = 204/444 (45%), Gaps = 96/444 (21%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ +P F + +LRT R+ NS CDCHL+WL WL++ P LGLYT+C +P
Sbjct: 204 TLNNNNISSIPVSSFNHMPKLRTFRLHSNSLRCDCHLAWLSPWLRQRPALGLYTQCSSPP 263
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGE-CA-AEPSCPHPCRCADGIVDCREKGLNKVPIL 121
++G N+ ++ + +F CSG + C+ A SCP C C++ IVDCR +GL +P
Sbjct: 264 TLRGLNLAELRKSDFACSGHSGSAFVQPCSLASGSCPPMCSCSNNIVDCRGRGLTAIPAH 323
Query: 122 LPEATTELRLEQN------------------------DITELPPKAFANYKRLRRIDLSK 157
LPE TE+RLEQN I+E+ P AF + L + L
Sbjct: 324 LPEGMTEIRLEQNGIKSVPPGAFTSYKKLRRIDLSNNQISEIAPDAFHGLRALSSLVLYG 383
Query: 158 NQISKVAVDAFQG------------------------LKSLTSLTLNNNNLTYLPDGVFA 193
N+I+++ F G L++L L+L +N + L G F+
Sbjct: 384 NKITELPSGVFDGLASLELLLLNANKIHCIRANVFKDLENLALLSLYDNKIQSLAKGTFS 443
Query: 194 ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFK 253
L ++TL +++N F+CDC++ WL +L+ P +C +P + + I I +F+
Sbjct: 444 SLRSIQTLHLAQNPFVCDCNVKWLADFLRSNPIETSGARCASPRRLANKRIAQIKSSKFR 503
Query: 254 CSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL 313
CS Y + D + EC ++P CP CRC +VDC L
Sbjct: 504 CSAKEQ------YHIPGTED---------RRLNYECNSKPVCPAKCRCEANVVDCSNLRL 548
Query: 314 NKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITEL-PPKAF 372
K P LP +T EL RL ND++ L AF
Sbjct: 549 TKFPEHLPSSTEEL------------------------------RLNNNDLSVLEATGAF 578
Query: 373 ANYKRLRRIRLEQNDITELPPKAF 396
+L++I L N I+E+ AF
Sbjct: 579 KGLSQLKKINLSNNKISEIEDGAF 602
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 152/294 (51%), Gaps = 55/294 (18%)
Query: 115 LNKVPILL---PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L+++P LL EA + L L +N I +P +AF L+ + L KN IS + AF+ L
Sbjct: 138 LSQLPELLFQKNEALSRLDLSENAIQAIPRRAFRGATDLKNLQLDKNHISCIEEGAFRAL 197
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+SL LTLNNNN++ +P F + +LRT R+ NS CDCHL+WL WL++ P LGLYT
Sbjct: 198 RSLEVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNSLRCDCHLAWLSPWLRQRPALGLYT 257
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
+C +P ++G N+ ++ + +F CSG S + + CS A
Sbjct: 258 QCSSPPTLRGLNLAELRKSDFACSGHS----GSAFVQPCSL------------------A 295
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP C C++ IVDCR +GL +P LPE TE+
Sbjct: 296 SGSCPPMCSCSNNIVDCRGRGLTAIPAHLPEGMTEI------------------------ 331
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +PP AF +YK+LRRI L N I+E+ P AF + L +
Sbjct: 332 ------RLEQNGIKSVPPGAFTSYKKLRRIDLSNNQISEIAPDAFHGLRALSSL 379
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/454 (24%), Positives = 179/454 (39%), Gaps = 97/454 (21%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F+ L ++TL +++N F+CDC++ WL +L+ P +C +P
Sbjct: 428 SLYDNKIQSLAKGTFSSLRSIQTLHLAQNPFVCDCNVKWLADFLRSNPIETSGARCASPR 487
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + EC ++P CP CRC +VDC
Sbjct: 488 RLANKRIAQIKSSKFRCSAKEQYHIPGTEDRRLNYECNSKPVCPAKCRCEANVVDCSNLR 547
Query: 115 LNKVPILLPEATTELRL-------------------------EQNDITELPPKAFANYKR 149
L K P LP +T ELRL N I+E+ AF
Sbjct: 548 LTKFPEHLPSSTEELRLNNNDLSVLEATGAFKGLSQLKKINLSNNKISEIEDGAFEGASS 607
Query: 150 LRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLR---------- 199
+ + L+ N + V F+G++ + L L NN ++ + +G F L +R
Sbjct: 608 VVELHLTANHLESVRGSMFKGMEGMRMLMLRNNKISCIHNGSFTGLTNVRLLSLYDNQLS 667
Query: 200 --------------TLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
TL + N F CDC LSW WL+ + +C P+ ++ +
Sbjct: 668 TILPGAFDTLPNLSTLNLLANPFKCDCRLSWFGAWLRSRRIVTGNPRCQGPAFLREIPLQ 727
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C ++ S C P CP C C D +
Sbjct: 728 DVAVPDFRCEDGAVLEDSN------------------------CGPGPQCPSQCTCMDTV 763
Query: 306 VDCREKGLNKVPILLPEATTEL----TYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQ 361
V C K L +P LP TEL S+ + Y + + L
Sbjct: 764 VRCSNKHLQALPRGLPRNVTELYLDGNQFTSVPKELTAFKYLQLVD-----------LSN 812
Query: 362 NDITELPPKAFANYKRLRRIRLEQNDITELPPKA 395
N I L +F+N +L + L N++ +PP A
Sbjct: 813 NKINSLSDDSFSNMSQLTTLILSYNELRCIPPLA 846
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 130/277 (46%), Gaps = 25/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L+ + G F L L TL + N F CDC LSW WL+ + +C P+
Sbjct: 660 SLYDNQLSTILPGAFDTLPNLSTLNLLANPFKCDCRLSWFGAWLRSRRIVTGNPRCQGPA 719
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C C P CP C C D +V C K L +P LP
Sbjct: 720 FLREIPLQDVAVPDFRCEDGAVLEDSNCGPGPQCPSQCTCMDTVVRCSNKHLQALPRGLP 779
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN--- 180
TEL L+ N T +P K +K L+ +DLS N+I+ ++ D+F + LT+L L+
Sbjct: 780 RNVTELYLDGNQFTSVP-KELTAFKYLQLVDLSNNKINSLSDDSFSNMSQLTTLILSYNE 838
Query: 181 ---------------------NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
N+++ L +G+F+++ L L I N CDC L WL
Sbjct: 839 LRCIPPLALGGLRSLRLLSLHGNDISELQEGIFSDVVSLSHLAIGANPLYCDCRLLWLSE 898
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 899 WVKSGYKEPGIARCAGPRGMEGKLLLTTPADKFQCLG 935
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 64/121 (52%), Gaps = 1/121 (0%)
Query: 88 TGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANY 147
G AE +CP PC C VDC G++ VP +P T L L N++T + F+
Sbjct: 43 AGHGGAE-ACPTPCSCLSNTVDCHGLGIHTVPKNIPRGTERLDLNGNNLTVITKTDFSGL 101
Query: 148 KRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENS 207
K LR + L +NQIS + AF LK L L LN N L+ LP+ +F + L L +SEN+
Sbjct: 102 KHLRVLHLMENQISNIEKGAFDELKELERLRLNKNRLSQLPELLFQKNEALSRLDLSENA 161
Query: 208 F 208
Sbjct: 162 I 162
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 286 TGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYI 345
G AE +CP PC C VDC G++ VP +P T L ++ + ++
Sbjct: 43 AGHGGAE-ACPTPCSCLSNTVDCHGLGIHTVPKNIPRGTERL----DLNGNNLTVITKTD 97
Query: 346 SNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ K R L +N I+ + AF K L R+RL +N +++LP F + L R+
Sbjct: 98 FSGLKHL--RVLHLMENQISNIEKGAFDELKELERLRLNKNRLSQLPELLFQKNEALSRL 155
>gi|24106490|dbj|BAC21664.1| SLIT1-Sa splicing product [Rattus norvegicus]
Length = 406
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 99/197 (50%), Positives = 131/197 (66%), Gaps = 12/197 (6%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 189 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPA 248
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEP-------SCPHPCRCADGIVDCREKGLN 116
++G N+ ++ + EF CSG GE A P SCP C C++GIVDCR KGL
Sbjct: 249 SLRGLNVAEVQKSEFSCSG-----QGEAAQVPACTLSSGSCPAMCSCSNGIVDCRGKGLT 303
Query: 117 KVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
+P LPE TE+RLE N I +PP AF+ Y++LRRIDLS NQI+++A DAFQGL+SL S
Sbjct: 304 AIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNS 363
Query: 177 LTLNNNNLTYLPDGVFA 193
L L N +T LP GVF
Sbjct: 364 LVLYGNKITDLPRGVFG 380
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 115/358 (32%), Positives = 160/358 (44%), Gaps = 100/358 (27%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR---- 151
+CP C C VDC GL +P +P T L L N+IT + FA K+LR
Sbjct: 59 ACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQL 118
Query: 152 --------------------RIDLS------------------------KNQISKVAVDA 167
R+DLS KNQIS++ A
Sbjct: 119 MENQIGAVERGAFDDMKELERLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISRIEEGA 178
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL 227
F+ L+ L LTLNNNN+T +P F + +LRT R+ N CDCHL+WL +WL++ P +
Sbjct: 179 FRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTI 238
Query: 228 GLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTG 287
GL+T+C P+ ++G N+ ++ + EF CSG + +C +
Sbjct: 239 GLFTQCSGPASLRGLNVAEVQKSEFSCSGQGEAAQ--------------VPACTL----- 279
Query: 288 ECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISN 347
+ SCP C C++GIVDCR KGL +P LPE TE+
Sbjct: 280 ---SSGSCPAMCSCSNGIVDCRGKGLTAIPANLPETMTEI-------------------- 316
Query: 348 NFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLE N I +PP AF+ Y++LRRI L N I E+ P AF + L +
Sbjct: 317 ----------RLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSL 364
>gi|47228836|emb|CAG09351.1| unnamed protein product [Tetraodon nigroviridis]
Length = 391
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 118/339 (34%), Positives = 169/339 (49%), Gaps = 86/339 (25%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ +P F + +LRT R+ N+ CDCHL+WL +WL++ P +GL+T+C P+
Sbjct: 53 TLNNNNISSIPVSSFNHMPKLRTFRLHSNNLHCDCHLAWLAQWLRQRPTVGLFTQCTLPA 112
Query: 64 HIKGQNILDIPEHEFKCSGPV------------------------EKPTGECA---AEPS 96
++G N+ ++ +HEF CS + +G A S
Sbjct: 113 ELRGLNVAEVQKHEFSCSDHCSFLEEQNSSKQLTELKYLMMVEGHQDSSGLQACSVGGGS 172
Query: 97 CPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLS 156
CP C C++ IVDCR KGL +P LPE+ E+RLEQN I +PP AF+ YK+LRRIDLS
Sbjct: 173 CPAMCTCSNNIVDCRGKGLTAIPANLPESMAEIRLEQNGIKSVPPGAFSPYKKLRRIDLS 232
Query: 157 KNQISKVAVDAFQGLKSLTSLT-----------LNNNNLTYLPDGV-------------- 191
NQIS++A DAFQGL+SL SL+ + N +T LP GV
Sbjct: 233 NNQISEIAPDAFQGLRSLNSLSHACLCCDFLVCVYGNKITDLPKGVFDGLYALQLLLLNA 292
Query: 192 ----------------------------------FAELFRLRTLRISENSFICDCHLSWL 217
F L ++TL +++N FICDC+L WL
Sbjct: 293 NKIHCIRANAFQDLQNLSLLSLYDNKIQTLAKGTFTSLRAIQTLHLAQNPFICDCNLKWL 352
Query: 218 HRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
+L+ P +C +P + + I I +F+CSG
Sbjct: 353 ADYLRSNPIETSGARCASPRRLANKRIGQIKSKKFRCSG 391
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 98/286 (34%), Positives = 145/286 (50%), Gaps = 49/286 (17%)
Query: 131 LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDG 190
L +N I +P KAF ++ + L KN I + AF+ ++ L LTLNNNN++ +P
Sbjct: 6 LSENFIQSIPRKAFRGATDIKNLQLDKNHIGCIEDGAFRAMRGLEVLTLNNNNISSIPVS 65
Query: 191 VFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEH 250
F + +LRT R+ N+ CDCHL+WL +WL++ P +GL+T+C P+ ++G N+ ++ +H
Sbjct: 66 SFNHMPKLRTFRLHSNNLHCDCHLAWLAQWLRQRPTVGLFTQCTLPAELRGLNVAEVQKH 125
Query: 251 EFKCSG--SSMETRSK---------IYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPC 299
EF CS S +E ++ + E D +C V SCP C
Sbjct: 126 EFSCSDHCSFLEEQNSSKQLTELKYLMMVEGHQDSSGLQACSV--------GGGSCPAMC 177
Query: 300 RCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRL 359
C++ IVDCR KGL +P LPE+ E+ RL
Sbjct: 178 TCSNNIVDCRGKGLTAIPANLPESMAEI------------------------------RL 207
Query: 360 EQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
EQN I +PP AF+ YK+LRRI L N I+E+ P AF + L +
Sbjct: 208 EQNGIKSVPPGAFSPYKKLRRIDLSNNQISEIAPDAFQGLRSLNSL 253
>gi|296192731|ref|XP_002744208.1| PREDICTED: slit homolog 3 protein-like, partial [Callithrix
jacchus]
Length = 384
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 97/198 (48%), Positives = 130/198 (65%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 187 TLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFTLCMAPV 246
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ D+ + E+ C GP +P A SCP PC C++ IVDCR KGL ++P LP
Sbjct: 247 HLRGFNVADVQKKEYVCPGPHSEPPSCNANSISCPSPCTCSNNIVDCRGKGLTEIPANLP 306
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N
Sbjct: 307 EGIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 366
Query: 184 LTYLPDGVFAELFRLRTL 201
+T + G+F L L+ L
Sbjct: 367 ITEIAKGLFDGLVSLQLL 384
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 143/294 (48%), Gaps = 57/294 (19%)
Query: 115 LNKVPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL ++T + L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 121 LQVLPELLFQSTPKLSRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRAL 180
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T
Sbjct: 181 RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFT 240
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
C AP H++G N+ D+ + E+ C G P +P A
Sbjct: 241 LCMAPVHLRGFNVADVQKKEYVCPG------------------------PHSEPPSCNAN 276
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP PC C++ IVDCR KGL ++P LPE E+
Sbjct: 277 SISCPSPCTCSNNIVDCRGKGLTEIPANLPEGIVEI------------------------ 312
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF YK+L+RI + +N I+++ P AF K L +
Sbjct: 313 ------RLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 360
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTY-MVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ VDC GL VP +P L +I R+ K+ +F
Sbjct: 33 ACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKM--------DFAGL 84
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R LE N ++ + AF + K+L R+RL +N + LP F + +L R+
Sbjct: 85 KNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLSRL 138
>gi|297676601|ref|XP_002816217.1| PREDICTED: slit homolog 3 protein-like, partial [Pongo abelii]
Length = 586
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/198 (48%), Positives = 129/198 (65%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 260 TLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFTLCMAPV 319
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ D+ + E+ C P +P A SCP PC C++ IVDCR KGL ++P LP
Sbjct: 320 HLRGFNVADVQKKEYVCPAPHSEPPSCNANSISCPSPCTCSNNIVDCRGKGLMEIPANLP 379
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N
Sbjct: 380 EGIVEIRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 439
Query: 184 LTYLPDGVFAELFRLRTL 201
+T + G+F L L+ L
Sbjct: 440 ITEIAKGLFDGLVSLQLL 457
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 142/294 (48%), Gaps = 57/294 (19%)
Query: 115 LNKVPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL ++T T L L +N I +P KAF ++ + L N IS + AF+ L
Sbjct: 194 LQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRAL 253
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+ L LTLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T
Sbjct: 254 RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFT 313
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAA 291
C AP H++G N+ D+ + E+ C P +P A
Sbjct: 314 LCMAPVHLRGFNVADVQKKEYVCPA------------------------PHSEPPSCNAN 349
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
SCP PC C++ IVDCR KGL ++P LPE E+
Sbjct: 350 SISCPSPCTCSNNIVDCRGKGLMEIPANLPEGIVEI------------------------ 385
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF YK+L+RI + +N I+++ P AF K L +
Sbjct: 386 ------RLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 433
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTY-MVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ VDC GL VP +P L +I R+ K+ +F
Sbjct: 106 ACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKM--------DFAGL 157
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R LE N ++ + AF + K+L R+RL +N + LP F + +L R+
Sbjct: 158 KNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRL 211
>gi|312378555|gb|EFR25100.1| hypothetical protein AND_09864 [Anopheles darlingi]
Length = 208
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 104/203 (51%), Positives = 127/203 (62%), Gaps = 23/203 (11%)
Query: 17 VFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEH 76
+FA + RLR LR+SEN F CDCHLSWL R+LK RL YT+C +P +KGQN+ D+ E
Sbjct: 1 MFAGMPRLRALRLSENLFACDCHLSWLARYLKNASRLAPYTRCHSPGQLKGQNVADLHEQ 60
Query: 77 EFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDI 136
+FKCSG E EC CPHPCRCADGIVDCREK + RLEQN I
Sbjct: 61 DFKCSGLTENAPMECGGRSLCPHPCRCADGIVDCREKA------------SPPRLEQNYI 108
Query: 137 TELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTL-----------NNNNLT 185
TE+PPKAFAN++RL+RIDLS N IS+VA DAF GLKSLTSL N N ++
Sbjct: 109 TEIPPKAFANHRRLKRIDLSNNNISRVAYDAFSGLKSLTSLVFKGLTSLQLLLLNANEIS 168
Query: 186 YLPDGVFAELFRLRTLRISENSF 208
+ F +L L L + +N+
Sbjct: 169 CVRRDAFKDLHNLSLLSLYDNNI 191
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/212 (40%), Positives = 104/212 (49%), Gaps = 66/212 (31%)
Query: 191 VFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEH 250
+FA + RLR LR+SEN F CDCHLSWL R+LK RL YT+C +P +KGQN+ D+ E
Sbjct: 1 MFAGMPRLRALRLSENLFACDCHLSWLARYLKNASRLAPYTRCHSPGQLKGQNVADLHEQ 60
Query: 251 EFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCRE 310
+FKCSG + E EC CPHPCRCADGIVDCRE
Sbjct: 61 DFKCSGLT------------------------ENAPMECGGRSLCPHPCRCADGIVDCRE 96
Query: 311 KGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPK 370
K RLEQN ITE+PPK
Sbjct: 97 KA------------------------------------------SPPRLEQNYITEIPPK 114
Query: 371 AFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
AFAN++RL+RI L N+I+ + AF+ K L
Sbjct: 115 AFANHRRLKRIDLSNNNISRVAYDAFSGLKSL 146
>gi|326678825|ref|XP_003201185.1| PREDICTED: slit homolog 1 protein-like [Danio rerio]
Length = 382
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 92/175 (52%), Positives = 124/175 (70%), Gaps = 1/175 (0%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ +P F + +LRT R+ NS CDCHLSWL +WL++ P LGLYT+C +P+
Sbjct: 184 TLNNNNISAIPISSFNHMPKLRTFRLHWNSLRCDCHLSWLSQWLRQRPALGLYTQCSSPA 243
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECA-AEPSCPHPCRCADGIVDCREKGLNKVPILL 122
H+ G N+ ++ + +F C+G ++ C A SCP C C + IVDCR KGL +P +
Sbjct: 244 HLHGLNLAELQKKDFTCAGALDSSPQPCGLASGSCPPMCSCTNNIVDCRGKGLTAIPANM 303
Query: 123 PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSL 177
PE+ TE+RLEQN I +PP AF++YKRLRRIDLS NQIS++A DAF GL+SL SL
Sbjct: 304 PESMTEIRLEQNGIKSVPPGAFSSYKRLRRIDLSNNQISEIAPDAFHGLRSLNSL 358
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 103/281 (36%), Positives = 149/281 (53%), Gaps = 53/281 (18%)
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL 184
A + L L +N+I +P +AF ++ + L KN IS + AF+ ++ L LTLNNNN+
Sbjct: 131 ALSRLDLSENNIQMIPRRAFRGATDIKNLQLDKNHISCIEDGAFRAMRVLEVLTLNNNNI 190
Query: 185 TYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNI 244
+ +P F + +LRT R+ NS CDCHLSWL +WL++ P LGLYT+C +P+H+ G N+
Sbjct: 191 SAIPISSFNHMPKLRTFRLHWNSLRCDCHLSWLSQWLRQRPALGLYTQCSSPAHLHGLNL 250
Query: 245 LDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADG 304
++ + +F C+G+ +S P +P G A SCP C C +
Sbjct: 251 AELQKKDFTCAGA-------------------LDSSP--QPCG--LASGSCPPMCSCTNN 287
Query: 305 IVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDI 364
IVDCR KGL +P +PE+ TE+ RLEQN I
Sbjct: 288 IVDCRGKGLTAIPANMPESMTEI------------------------------RLEQNGI 317
Query: 365 TELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+PP AF++YKRLRRI L N I+E+ P AF + L +
Sbjct: 318 KSVPPGAFSSYKRLRRIDLSNNQISEIAPDAFHGLRSLNSL 358
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 55/113 (48%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDC VP +P+ T L L N++T + FA K LR + L
Sbjct: 30 ACPPHCSCTGSTVDCHGLAFKSVPRNIPKTTERLDLNANNLTHIGKDDFAGLKHLRILHL 89
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
NQI + AF LK L L LN N L LP+ +F + L L +SEN+
Sbjct: 90 MDNQIVSIDRGAFSDLKELDRLRLNRNRLQQLPELLFLKNPALSRLDLSENNI 142
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 45/116 (38%), Gaps = 14/116 (12%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTY----MVSIDRVDKVLLYSYISNNF 349
+CP C C VDC VP +P+ T L + I + D L
Sbjct: 30 ACPPHCSCTGSTVDCHGLAFKSVPRNIPKTTERLDLNANNLTHIGKDDFAGLKHL----- 84
Query: 350 KRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R L N I + AF++ K L R+RL +N + +LP F L R+
Sbjct: 85 -----RILHLMDNQIVSIDRGAFSDLKELDRLRLNRNRLQQLPELLFLKNPALSRL 135
>gi|380805659|gb|AFE74705.1| slit homolog 3 protein precursor, partial [Macaca mulatta]
Length = 240
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 91/184 (49%), Positives = 122/184 (66%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN++ + F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP
Sbjct: 55 TLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFTLCMAPV 114
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ D+ + E+ C P +P A SCP PC C++ IVDCR KGL ++P LP
Sbjct: 115 HLRGFNVADVQKKEYVCPAPHSEPPSCNANSISCPSPCTCSNNIVDCRGKGLTEIPANLP 174
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E E+RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N
Sbjct: 175 EGIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 234
Query: 184 LTYL 187
+T +
Sbjct: 235 ITEI 238
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/279 (33%), Positives = 134/279 (48%), Gaps = 54/279 (19%)
Query: 127 TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTY 186
T L L +N I +P KAF ++ + L N IS + AF+ L+ L LTLNNNN++
Sbjct: 4 TRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISR 63
Query: 187 LPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILD 246
+ F + ++RTLR+ N CDCHL+WL WL++ +G +T C AP H++G N+ D
Sbjct: 64 ILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFTLCMAPVHLRGFNVAD 123
Query: 247 IPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIV 306
+ + E+ C P +P A SCP PC C++ IV
Sbjct: 124 VQKKEYVCPA------------------------PHSEPPSCNANSISCPSPCTCSNNIV 159
Query: 307 DCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITE 366
DCR KGL ++P LPE E+ RLEQN I
Sbjct: 160 DCRGKGLTEIPANLPEGIVEI------------------------------RLEQNSIKS 189
Query: 367 LPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+P AF YK+L+RI + +N I+++ P AF K L +
Sbjct: 190 IPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 228
>gi|426365749|ref|XP_004049929.1| PREDICTED: slit homolog 1 protein-like [Gorilla gorilla gorilla]
Length = 231
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/174 (51%), Positives = 120/174 (68%), Gaps = 4/174 (2%)
Query: 23 RLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 82
+LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+ ++G N+ ++ + EF CSG
Sbjct: 3 KLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLNVAEVQKSEFSCSG 62
Query: 83 PVEK---PTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITEL 139
E PT ++ SCP C C++GIVDCR KGL +P LPE TE+RLE N I +
Sbjct: 63 QGEAGRVPTCTLSSG-SCPAMCTCSNGIVDCRGKGLTAIPANLPETMTEIRLELNGIKSI 121
Query: 140 PPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFA 193
PP AF+ Y++LRRIDLS NQI+++A DAFQGL+SL SL L N +T LP GVF
Sbjct: 122 PPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFG 175
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 101/209 (48%), Gaps = 52/209 (24%)
Query: 197 RLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
+LRT R+ N CDCHL+WL +WL++ P +GL+T+C P+ ++G N+ ++ + EF CSG
Sbjct: 3 KLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLNVAEVQKSEFSCSG 62
Query: 257 SSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKV 316
R +C + + SCP C C++GIVDCR KGL +
Sbjct: 63 QGEAGR--------------VPTCTL--------SSGSCPAMCTCSNGIVDCRGKGLTAI 100
Query: 317 PILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYK 376
P LPE TE+ RLE N I +PP AF+ Y+
Sbjct: 101 PANLPETMTEI------------------------------RLELNGIKSIPPGAFSPYR 130
Query: 377 RLRRIRLEQNDITELPPKAFANYKRLRRM 405
+LRRI L N I E+ P AF + L +
Sbjct: 131 KLRRIDLSNNQIAEIAPDAFQGLRSLNSL 159
>gi|324500785|gb|ADY40360.1| Protein slit [Ascaris suum]
Length = 1442
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 128/432 (29%), Positives = 195/432 (45%), Gaps = 78/432 (18%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLN NNL+ L G + LR LR+++N ++CDC L W+ + + P L ++C P+
Sbjct: 170 TLNANNLSTL--GEIIPMPNLRVLRLADNPWLCDCRLRWIKKVISAEPALASNSRCHRPA 227
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H+ + I I E KCSG ++ C CP C C + VDCR++GL +P LP
Sbjct: 228 HLHSRTIASIDEQVMKCSGIEKRAASSCREAAVCPSVCTCTESTVDCRDRGLTHIPANLP 287
Query: 124 EATTELRLEQNDIT------------------------ELPPKAFANYKRLRRIDLSKNQ 159
+ ELRLEQN IT E+ P+AF + L + L N
Sbjct: 288 SSVLELRLEQNQITYIPPRAFHNLYRLKRLDLSKNSIVEIAPRAFDGLRSLNSLVLYGNS 347
Query: 160 ISKVAVDAFQGLKSLTSLTLN------------------------NNNLTYLPDGVFAEL 195
++ + +AF GL ++ L LN +NN+ + +G F L
Sbjct: 348 LTDLPSEAFHGLFNIQLLLLNANKLQCLRKETFKNLSNLNLLSLYDNNIKSIANGTFDGL 407
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
L TL ++ N ICDC+L WL L +C +P + + + + +F+C
Sbjct: 408 TNLMTLHLARNPIICDCNLEWLAMLLSIRAVETSGARCESPKRVARRRLATLHHSKFRCK 467
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
GS E+ +EC D+ CPVE C C IVDC ++GL +
Sbjct: 468 GS--ESYVTARADECIIDY----GCPVE---------------CSCHGSIVDCSKRGLTE 506
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRR-LEQNDITELPPKAFAN 374
P +P TTEL +S +++ + S NF+R TN + L N+I+ + A +N
Sbjct: 507 FPSNIPLFTTEL--HMSHNKISSI----RNSANFRRLTNLKKLILRDNEISSIEIGALSN 560
Query: 375 YKRLRRIRLEQN 386
K L + L +N
Sbjct: 561 LKNLTELDLSEN 572
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/474 (24%), Positives = 190/474 (40%), Gaps = 104/474 (21%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
+NN+ + +G F L L TL ++ N ICDC+L WL L +C +P +
Sbjct: 393 DNNIKSIANGTFDGLTNLMTLHLARNPIICDCNLEWLAMLLSIRAVETSGARCESPKRVA 452
Query: 67 GQNILDIPEHEFKCSGP---VEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+ + + +F+C G V EC + CP C C IVDC ++GL + P +P
Sbjct: 453 RRRLATLHHSKFRCKGSESYVTARADECIIDYGCPVECSCHGSIVDCSKRGLTEFPSNIP 512
Query: 124 EATTELRLEQNDITELPPKAFANYKRL---RRIDLSKNQISKVAVDAFQGLKSLTSL--- 177
TTEL + N I+ + + AN++RL +++ L N+IS + + A LK+LT L
Sbjct: 513 LFTTELHMSHNKISSI--RNSANFRRLTNLKKLILRDNEISSIEIGALSNLKNLTELDLS 570
Query: 178 ----------------------------------------------TLNNNNLTYLPDGV 191
L+NN++ + +G
Sbjct: 571 ENRLRHFSASQLGESSSTLQTLLLNNNQIECITSSSLRSLTSLHIMNLSNNSIRCIAEGA 630
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTKCFAPSHIKGQNILDIPEH 250
+L + ++ + N FIC+CH++ +L+ R+ KC P H +G+ I + +
Sbjct: 631 MLQLPNIHSIAVGNNDFICNCHIADFANYLRVNGSRVLDSPKCHEPKHFRGRPIATVNKD 690
Query: 251 EFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPS-CPHPCRCADGIVDCR 309
E C ++ CA + CP C C +V C
Sbjct: 691 ELSCKSAAENV---------------------------CAENGTYCPAGCICQGTVVRCS 723
Query: 310 EKGLNKVPILLPEATTEL------TYMVSIDRVDKVLLYSYI-----------SNNFKRW 352
+ L + P +P TTEL + + +++K+ + + S F
Sbjct: 724 NRALKEFPPGIPLETTELFLDSNDITSIPLAQLNKLYQLAKLDLSHNRITVIESGAFANL 783
Query: 353 TNRSRR-LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
T S L N + L P AF+ LR + L ND++ LP AFAN + +
Sbjct: 784 TKLSTLILSYNKLQCLEPAAFSALSNLRILSLHGNDLSVLPESAFANLTNITHI 837
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 133/278 (47%), Gaps = 29/278 (10%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTKCFAPS 63
L+NN++ + +G +L + ++ + N FIC+CH++ +L+ R+ KC P
Sbjct: 618 LSNNSIRCIAEGAMLQLPNIHSIAVGNNDFICNCHIADFANYLRVNGSRVLDSPKCHEPK 677
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H +G+ I + + E C E E CP C C +V C + L + P +P
Sbjct: 678 HFRGRPIATVNKDELSCKSAAENVCAE--NGTYCPAGCICQGTVVRCSNRALKEFPPGIP 735
Query: 124 EATTELRLEQNDITELP------------------------PKAFANYKRLRRIDLSKNQ 159
TTEL L+ NDIT +P AFAN +L + LS N+
Sbjct: 736 LETTELFLDSNDITSIPLAQLNKLYQLAKLDLSHNRITVIESGAFANLTKLSTLILSYNK 795
Query: 160 ISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
+ + AF L +L L+L+ N+L+ LP+ FA L + + + N+ CDCH++W +
Sbjct: 796 LQCLEPAAFSALSNLRILSLHGNDLSVLPESAFANLTNITHIALGSNALYCDCHMAWFSK 855
Query: 220 WLK-RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K R+ G+ +C P + Q +L EH FKC G
Sbjct: 856 WIKARFVEAGI-ARCELPLSTRNQLLLTANEHHFKCEG 892
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 149/381 (39%), Gaps = 128/381 (33%)
Query: 97 CPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITEL----------------- 139
CPH C CA V C +GL ++P +P T L L++N I+ +
Sbjct: 17 CPHLCSCAQNTVICTGQGLTRIPSDIPADTYRLDLQENKISVVRKDDLAALGQLKILQLM 76
Query: 140 -------------------------------PPKAFANYKRLRRIDLSKNQISKVAVDAF 168
P F N + L R+DLS+N +S +
Sbjct: 77 DNQIQMIEDNAFDNLLQLERLRLNRNRLRVLPEGVFINNRNLHRLDLSENFLSVLTDSQL 136
Query: 169 QGLKSLTSL------------------------TLNNNNLTYLPDGVFAELFRLRTLRIS 204
QG +S+ +L TLN NNL+ L G + LR LR++
Sbjct: 137 QGPRSMRNLQLDRNLLTCVDSQILSTWTQMEILTLNANNLSTL--GEIIPMPNLRVLRLA 194
Query: 205 ENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSK 264
+N ++CDC L W+ + + P L ++C P+H+ + I I E KCSG +E R+
Sbjct: 195 DNPWLCDCRLRWIKKVISAEPALASNSRCHRPAHLHSRTIASIDEQVMKCSG--IEKRA- 251
Query: 265 IYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEAT 324
C CP C C + VDCR++GL +P LP +
Sbjct: 252 ---------------------ASSCREAAVCPSVCTCTESTVDCRDRGLTHIPANLPSSV 290
Query: 325 TELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLE 384
EL RLEQN IT +PP+AF N RL+R+ L
Sbjct: 291 LEL------------------------------RLEQNQITYIPPRAFHNLYRLKRLDLS 320
Query: 385 QNDITELPPKAFANYKRLRRM 405
+N I E+ P+AF + L +
Sbjct: 321 KNSIVEIAPRAFDGLRSLNSL 341
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTKCFAP 62
+L+ N+L+ LP+ FA L + + + N+ CDCH++W +W+K R+ G+ +C P
Sbjct: 814 SLHGNDLSVLPESAFANLTNITHIALGSNALYCDCHMAWFSKWIKARFVEAGI-ARCELP 872
Query: 63 SHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCR 102
+ Q +L EH FKC GP+ K T +P +PCR
Sbjct: 873 LSTRNQLLLTANEHHFKCEGPLPK-TVLAKCDPCIDNPCR 911
>gi|241999702|ref|XP_002434494.1| slit protein, putative [Ixodes scapularis]
gi|215497824|gb|EEC07318.1| slit protein, putative [Ixodes scapularis]
Length = 445
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/402 (32%), Positives = 182/402 (45%), Gaps = 92/402 (22%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLN NNLT L +F + +LR +R+SEN +CDC L+WL WL+R+PRLGL T+C P
Sbjct: 108 TLNRNNLTTLGKQLFEGMPKLRVVRLSENPLVCDCRLAWLALWLQRHPRLGLLTRCSRPL 167
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++G+ + ++ E + +C P E + A
Sbjct: 168 PLRGKLLAELHETDLRCE-PGEPSSWALLA------------------------------ 196
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
RLEQN ITE+P AFA K +RRIDLS N ISKVA DAF GL SLTSL L
Sbjct: 197 ------RLEQNRITEIPSHAFAQLKWIRRIDLSGNLISKVAPDAFSGLTSLTSLHL---- 246
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+ N FICDC+L WL +L +YP +C +P + +
Sbjct: 247 --------------------ARNPFICDCNLRWLATYLHQYPVETSGARCESPKRMHRRR 286
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
+ + + +FKC GS E R+++ G+C + CP C C
Sbjct: 287 LTLLGDSKFKCKGSE-EHRTRL--------------------AGDCIVDRDCPESCVCEG 325
Query: 304 GIVDCREKGLNKVPILLPEATTELTYM--VSIDRVDKVLLYSYISNNFKRWTNRSRRLEQ 361
IVDC K L ++P LP TTEL D D L + + L +
Sbjct: 326 TIVDCSRKSLREIPSDLPTFTTELDLRNNAIADIEDNAFLGAEQLADLL--------LME 377
Query: 362 NDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLR 403
N + ++ PK F+ LR + L N ++ + FA+ +R
Sbjct: 378 NKLRQVRPKMFSGLSSLRTLMLRSNQLSFIANDTFADLTTVR 419
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 112/209 (53%), Gaps = 3/209 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N ++ + F+ L L +L ++ N FICDC+L WL +L +YP +C +P
Sbjct: 222 LSGNLISKVAPDAFSGLTSLTSLHLARNPFICDCNLRWLATYLHQYPVETSGARCESPKR 281
Query: 65 IKGQNILDIPEHEFKCSGPVEKPT---GECAAEPSCPHPCRCADGIVDCREKGLNKVPIL 121
+ + + + + +FKC G E T G+C + CP C C IVDC K L ++P
Sbjct: 282 MHRRRLTLLGDSKFKCKGSEEHRTRLAGDCIVDRDCPESCVCEGTIVDCSRKSLREIPSD 341
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
LP TTEL L N I ++ AF ++L + L +N++ +V F GL SL +L L +
Sbjct: 342 LPTFTTELDLRNNAIADIEDNAFLGAEQLADLLLMENKLRQVRPKMFSGLSSLRTLMLRS 401
Query: 182 NNLTYLPDGVFAELFRLRTLRISENSFIC 210
N L+++ + FA+L +R L + +N C
Sbjct: 402 NQLSFIANDTFADLTTVRLLSLYDNKIRC 430
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 78/125 (62%)
Query: 130 RLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPD 189
+L +N I + AFA+ + R+DLS N+++ + G L +LTLN NNLT L
Sbjct: 60 QLMENQIETVHEGAFADLTSMERLDLSHNRLAVLGQWMLHGSLLLKNLTLNRNNLTTLGK 119
Query: 190 GVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPE 249
+F + +LR +R+SEN +CDC L+WL WL+R+PRLGL T+C P ++G+ + ++ E
Sbjct: 120 QLFEGMPKLRVVRLSENPLVCDCRLAWLALWLQRHPRLGLLTRCSRPLPLRGKLLAELHE 179
Query: 250 HEFKC 254
+ +C
Sbjct: 180 TDLRC 184
>gi|341884440|gb|EGT40375.1| hypothetical protein CAEBREN_29849 [Caenorhabditis brenneri]
Length = 1413
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/435 (29%), Positives = 194/435 (44%), Gaps = 81/435 (18%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLN N LT + A R R L + N + CDC L W+ +WL++ + T C P
Sbjct: 173 TLNGNRLTTFEEPSNA---RFRQLDLFNNPWNCDCRLRWMKKWLEKTEGIN-KTVCTTPL 228
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGE-CAAEPSCPHPCRCADGIVDCREKGLNKVPILL 122
+++G I ++ + CSG ++ + C CP PC C VDCR+ GL VP L
Sbjct: 229 NLQGSAIQNLQDEFMTCSGNRKRRYKKTCENAEICPLPCTCTGTTVDCRDSGLTYVPTNL 288
Query: 123 PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNN 182
P +TTE+RLEQN I+ +P +F N + L R+DLSKN I+++ AF GL++L +L L N
Sbjct: 289 PPSTTEIRLEQNQISSIPSNSFKNLRNLTRLDLSKNIITEIFPKAFYGLQNLHTLVLYGN 348
Query: 183 NLTYL------------------------------------------------PDGVFAE 194
N+T L + F
Sbjct: 349 NITDLKSDTFEGLGSLQLLLLNANQLTCIRRGTFDHVPKLNMLSLYDNNIRSISESTFRN 408
Query: 195 LFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
L L TL +++N ICDC+L WL + + +C P ++ + +P ++FKC
Sbjct: 409 LTNLSTLHLAKNPLICDCNLQWLAQLNLQKNIETSGARCEQPKRLRKKKFATLPPNKFKC 468
Query: 255 SGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLN 314
G+ + K C + CP C C VDC ++GL
Sbjct: 469 KGAEA---------------------FISKFADSCFIDSICPTQCDCYGTTVDCNKRGLM 507
Query: 315 KVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFA 373
+P +P+ TT L ++S + + V L S+N N L N IT + K+F
Sbjct: 508 SIPFPIPQFTTHL--LLSGNNISTVDL----SSNIHVLENLEVLDLSSNQITYINDKSFE 561
Query: 374 NYKRLRRIRLEQNDI 388
N ++LR +RL +N++
Sbjct: 562 NLRKLRELRLNENNL 576
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 124/449 (27%), Positives = 186/449 (41%), Gaps = 79/449 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +NN+ + + F L L TL +++N ICDC+L WL + + +C P
Sbjct: 392 SLYDNNIRSISESTFRNLTNLSTLHLAKNPLICDCNLQWLAQLNLQKNIETSGARCEQPK 451
Query: 64 HIKGQNILDIPEHEFKCSGP---VEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
++ + +P ++FKC G + K C + CP C C VDC ++GL +P
Sbjct: 452 RLRKKKFATLPPNKFKCKGAEAFISKFADSCFIDSICPTQCDCYGTTVDCNKRGLMSIPF 511
Query: 121 LLPEATTELRLEQNDITELPPKAFANY-KRLRRIDLSKNQISKVAVDAFQGLKSLTSLTL 179
+P+ TT L L N+I+ + + + + L +DLS NQI+ + +F+ L+ L L L
Sbjct: 512 PIPQFTTHLLLSGNNISTVDLSSNIHVLENLEVLDLSSNQITYINDKSFENLRKLRELRL 571
Query: 180 NNNNLTYLPDGV-------------------FAELF-----RLRTLRISENSFICDCHLS 215
N NNL + V F+ LF RL+ +R+ N +CDC L
Sbjct: 572 NENNLHHFSSLVLDEESSLEVLDLSDNNIQCFSTLFFDKAPRLKEIRVLGNDLLCDCRLL 631
Query: 216 WLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPE-HEFKCSGSSMETRSKIYREECSTDF 274
L WL+ SH +D+P +F S + R+ C+
Sbjct: 632 PLMSWLRS-----------NTSH-----SIDVPPCQQFHYSDEESD------RQRCAA-- 667
Query: 275 HPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL----TYM 330
P +C + CP C C D +V C K L P +P TTEL Y+
Sbjct: 668 FPEETCSDDSNL--------CPPKCSCLDRVVRCSNKNLTSFPSRIPYDTTELYLDANYI 719
Query: 331 VSIDRVDKVLLYSYI-------------SNNFKRWTNRSRR-LEQNDITELPPKAFANYK 376
I D LYS +N F T S + N + L P AF
Sbjct: 720 NEIPVHDLNRLYSLTKLDLSHNRLISLENNTFSNLTKLSTLIISYNKLRCLQPLAFNGLI 779
Query: 377 RLRRIRLEQNDITELPPKAFANYKRLRRM 405
LR + L NDI+ LP AF N + +
Sbjct: 780 SLRILSLHGNDISFLPESAFINLTSITHI 808
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 152/374 (40%), Gaps = 104/374 (27%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATT---------------------------- 127
+CP C C D V C +GL ++P+ +P T
Sbjct: 16 TCPTECVCVDRSVSCNGQGLTEIPVGIPNDTVRLLVSTRSWGNHKILQMMDNQIVAIHGQ 75
Query: 128 ---------ELRLEQNDITELPPKAFANYKRLRRI--------------DLSKNQISKVA 164
+LRL +N I LP F +L + DLS+N ++ V
Sbjct: 76 AFAKLVFLQKLRLARNRIRHLPDNVFLKNVKLSHLWVFQAFVFSFSIFSDLSENDLTVVT 135
Query: 165 VDAFQGLKSLTSLTLNNNNLTYLPDGVFAELF---------------------RLRTLRI 203
QG + L SL L+ N++ L + V + R R L +
Sbjct: 136 DAQLQGPEFLESLHLDKNHIFCLENNVISSWASLEVLTLNGNRLTTFEEPSNARFRQLDL 195
Query: 204 SENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
N + CDC L W+ +WL++ + T C P +++G I ++ + CSG+ R
Sbjct: 196 FNNPWNCDCRLRWMKKWLEKTEGIN-KTVCTTPLNLQGSAIQNLQDEFMTCSGN----RK 250
Query: 264 KIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEA 323
+ Y++ C AE CP PC C VDCR+ GL VP LP +
Sbjct: 251 RRYKKTCEN------------------AEI-CPLPCTCTGTTVDCRDSGLTYVPTNLPPS 291
Query: 324 TTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPPKAFANYKRLRRIR 382
TTE+ R+++ + S SN+FK N +R L +N ITE+ PKAF + L +
Sbjct: 292 TTEI-------RLEQNQISSIPSNSFKNLRNLTRLDLSKNIITEIFPKAFYGLQNLHTLV 344
Query: 383 LEQNDITELPPKAF 396
L N+IT+L F
Sbjct: 345 LYGNNITDLKSDTF 358
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 124/284 (43%), Gaps = 51/284 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++NN+ F + RL+ +R+ N +CDC L L WL+ SH
Sbjct: 595 LSDNNIQCFSTLFFDKAPRLKEIRVLGNDLLCDCRLLPLMSWLRS-----------NTSH 643
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPS---------CPHPCRCADGIVDCREKGL 115
+D+P + E CAA P CP C C D +V C K L
Sbjct: 644 S-----IDVPPCQQFHYSDEESDRQRCAAFPEETCSDDSNLCPPKCSCLDRVVRCSNKNL 698
Query: 116 NKVPILLPEATTELRLEQNDITELPP------------------------KAFANYKRLR 151
P +P TTEL L+ N I E+P F+N +L
Sbjct: 699 TSFPSRIPYDTTELYLDANYINEIPVHDLNRLYSLTKLDLSHNRLISLENNTFSNLTKLS 758
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICD 211
+ +S N++ + AF GL SL L+L+ N++++LP+ F L + + + NS CD
Sbjct: 759 TLIISYNKLRCLQPLAFNGLISLRILSLHGNDISFLPESAFINLTSITHIAVGSNSLYCD 818
Query: 212 CHLSWLHRWLK-RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
C+++W +W+K ++ G+ +C P+ + Q +L H+F C
Sbjct: 819 CNMAWFSKWIKSKFIEAGI-ARCEYPASVSNQLLLTAQPHQFTC 861
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTKCFAP 62
+L+ N++++LP+ F L + + + NS CDC+++W +W+K ++ G+ +C P
Sbjct: 785 SLHGNDISFLPESAFINLTSITHIAVGSNSLYCDCNMAWFSKWIKSKFIEAGI-ARCEYP 843
Query: 63 SHIKGQNILDIPEHEFKCSGPV 84
+ + Q +L H+F C V
Sbjct: 844 ASVSNQLLLTAQPHQFTCDSKV 865
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 19/113 (16%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C D V C +GL ++P+ +P T L +VS + W
Sbjct: 16 TCPTECVCVDRSVSCNGQGLTEIPVGIPNDTVRL--LVST----------------RSWG 57
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N + ++ N I + +AFA L+++RL +N I LP F +L +
Sbjct: 58 NHKILQMMDNQIVAIHGQAFAKLVFLQKLRLARNRIRHLPDNVFLKNVKLSHL 110
>gi|395505064|ref|XP_003756866.1| PREDICTED: slit homolog 3 protein [Sarcophilus harrisii]
Length = 1422
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 126/473 (26%), Positives = 202/473 (42%), Gaps = 100/473 (21%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 308 SLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 367
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K +G+C + CP CRC IVDC + L ++P
Sbjct: 368 RLANKRISQIKSKKFRCSGSEDYRNKFSGDCFMDLVCPEKCRCEGTIVDCSNQKLVRIPN 427
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVDA--------- 167
+PE T+LRL N+I+ L F LR+I+LS N+I +V D
Sbjct: 428 HIPEYVTDLRLNDNEISVLEATGIFKKLPNLRKINLSNNKIKEVREGVFDGAANVQELML 487
Query: 168 ------------FQGLKSLTS------------------------LTLNNNNLTYLPDGV 191
F+GL SL + L+L +N +T + G
Sbjct: 488 TGNQLELVHGRMFRGLTSLKTMMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTITPGA 547
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L T+ + N F C+CHL+WL +WL++ + +C P +K I D+ +
Sbjct: 548 FTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 607
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ + C P CP C C + +V C K
Sbjct: 608 FTCDGNDESS---------------------------CQVAPRCPEQCTCMETVVRCSNK 640
Query: 312 GLNKVPILLPEATTEL-------------------TYMVSIDRVDKVLLYSYISNNFKRW 352
GL +P +P+ TEL ++ + +L +Y +N +
Sbjct: 641 GLRVLPKGIPKDVTELYLEGNHLTTVPKELSNLRHLTLIDLSNNSISVLANYTFSNMTQL 700
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L N + +P AF + LR + L NDI+ +P +F + L +
Sbjct: 701 S--TLILSYNQLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTALSHL 751
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/325 (32%), Positives = 154/325 (47%), Gaps = 37/325 (11%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CHL+WL +WL++ + +C P
Sbjct: 534 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPF 593
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C + +V C KGL +P +P
Sbjct: 594 FLKEIPIQDVAIQDFTCDGNDES---SCQVAPRCPEQCTCMETVVRCSNKGLRVLPKGIP 650
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVA------------------- 164
+ TEL LE N +T +P K +N + L IDLS N IS +A
Sbjct: 651 KDVTELYLEGNHLTTVP-KELSNLRHLTLIDLSNNSISVLANYTFSNMTQLSTLILSYNQ 709
Query: 165 -----VDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
V AF GL+SL LTL+ N+++ +P+G F +L L L + N CDC L WL
Sbjct: 710 LRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTALSHLALGTNPLHCDCSLRWLSE 769
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
W+K + +C +P H+ + +L P H F+C G+ + +P S
Sbjct: 770 WVKAGYKEPGIARCSSPEHMADRLLLTTPTHRFQCKGA--------VDISIAAKCNPCLS 821
Query: 280 CPVEKPTGECAAEPSCPHPCRCADG 304
P K G C+ +P+ + C C G
Sbjct: 822 SPC-KNNGTCSTDPTEVYRCSCPYG 845
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 155/352 (44%), Gaps = 81/352 (23%)
Query: 107 IVDCREKGLNKVPIL----LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISK 162
I+ ++++P+ +P+ T LRLEQN I +P AF YK+L+RID+SKNQIS
Sbjct: 186 ILTLNNNNISRIPVTSFNHMPKIRT-LRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISD 244
Query: 163 VAVDAFQGLKSLTSLTLNNNNLT------------------------------------- 185
+A DAFQGLKSLTSL L N +T
Sbjct: 245 IAPDAFQGLKSLTSLVLYGNKITEIAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLHNL 304
Query: 186 -----------YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCF 234
+ G+FA L ++TL +++N F+CDCHL WL +L+ P +C
Sbjct: 305 HLLSLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCS 364
Query: 235 APSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPS 294
+P + + I I +F+CSG S+ YR K +G+C +
Sbjct: 365 SPRRLANKRISQIKSKKFRCSG------SEDYR---------------NKFSGDCFMDLV 403
Query: 295 CPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN 354
CP CRC IVDC + L ++P +PE T+L D VL + I FK+ N
Sbjct: 404 CPEKCRCEGTIVDCSNQKLVRIPNHIPEYVTDLRLN---DNEISVLEATGI---FKKLPN 457
Query: 355 -RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R L N I E+ F ++ + L N + + + F L+ M
Sbjct: 458 LRKINLSNNKIKEVREGVFDGAANVQELMLTGNQLELVHGRMFRGLTSLKTM 509
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 60/113 (53%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC GL VP +P L L++N+IT + FA K LR + L
Sbjct: 34 ACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKTDFAGLKNLRVLHL 93
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+NQ+S + AFQ LK L L LN N L LP+ +F +L L +SEN
Sbjct: 94 EENQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQNTLKLTRLDLSENQI 146
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 115 LNKVPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L +P LL + T T L L +N I +P KAF ++ + L NQIS + AF+ L
Sbjct: 122 LQVLPELLFQNTLKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNQISCIEDGAFRAL 181
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L LTLNNNN++ +P F + ++RTLR+ +NS
Sbjct: 182 RDLEILTLNNNNISRIPVTSFNHMPKIRTLRLEQNSI 218
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ VDC GL VP +P L +D+ + +F
Sbjct: 34 ACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLD-------LDRNNITRITKTDFAGLK 86
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R LE+N ++ + AF + K+L R+RL +N + LP F N +L R+
Sbjct: 87 NLRVLHLEENQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQNTLKLTRL 139
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 89/212 (41%), Gaps = 46/212 (21%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW----LKRYPRLGLYTKCF 60
L+ NN+T + FA L LR L + EN +S + R LK+ RL L
Sbjct: 69 LDRNNITRITKTDFAGLKNLRVLHLEEN------QVSVIERGAFQDLKQLERLRL----- 117
Query: 61 APSHIKGQNILDI-PEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVP 119
+N L + PE F+ + + + +D E + +P
Sbjct: 118 ------NKNKLQVLPELLFQNTLKLTR---------------------LDLSENQIQGIP 150
Query: 120 ILLPEATTE---LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
T+ L+L+ N I+ + AF + L + L+ N IS++ V +F + + +
Sbjct: 151 RKAFRGITDVKNLQLDNNQISCIEDGAFRALRDLEILTLNNNNISRIPVTSFNHMPKIRT 210
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
L L N++ +P G F + +L+ + IS+N
Sbjct: 211 LRLEQNSIKSIPAGAFTQYKKLKRIDISKNQI 242
>gi|119581905|gb|EAW61501.1| slit homolog 3 (Drosophila), isoform CRA_c [Homo sapiens]
Length = 1198
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 131/471 (27%), Positives = 204/471 (43%), Gaps = 96/471 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 84 SLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 143
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + + + EC + CP CRC IVDC + L ++P
Sbjct: 144 RLANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLVRIPS 203
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKV---AVDA--------- 167
LPE T+LRL N+++ L F LR+I+LS N+I +V A D
Sbjct: 204 HLPEYVTDLRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELML 263
Query: 168 ------------FQGLKSLTS------------------------LTLNNNNLTYLPDGV 191
F+GL L + L+L +N +T + G
Sbjct: 264 TGNQLETVHGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGA 323
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L T+ + N F C+CHL+WL +WL++ + +C P +K I D+ +
Sbjct: 324 FTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 383
Query: 252 FKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
F C G+ EE S C P CP C C + +V C K
Sbjct: 384 FTCDGN----------EESS-----------------CQLSPRCPEQCTCMETVVRCSNK 416
Query: 312 GLNKVPILLPEATTEL----TYMVSIDRVDKVL----LYSYISNNFKRWTNRSRR----- 358
GL +P +P+ TEL ++ ++ R L L +N+ TN +
Sbjct: 417 GLRALPRGMPKDVTELYLEGNHLTAVPRELSALRHLTLIDLSNNSISMLTNYTFSNMSHL 476
Query: 359 ----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P AF + LR + L NDI+ +P +F + L +
Sbjct: 477 STLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHL 527
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 134/277 (48%), Gaps = 28/277 (10%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CHL+WL +WL++ + +C P
Sbjct: 310 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPF 369
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C + +V C KGL +P +P
Sbjct: 370 FLKEIPIQDVAIQDFTCDGNEES---SCQLSPRCPEQCTCMETVVRCSNKGLRALPRGMP 426
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISK--------------------- 162
+ TEL LE N +T +P + + + L IDLS N IS
Sbjct: 427 KDVTELYLEGNHLTAVP-RELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNR 485
Query: 163 ---VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
+ V AF GL+SL LTL+ N+++ +P+G F +L L L + N CDC L WL
Sbjct: 486 LRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSE 545
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C +P + + +L P H F+C G
Sbjct: 546 WVKAGYKEPGIARCSSPEPMADRLLLTTPTHRFQCKG 582
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 141/302 (46%), Gaps = 34/302 (11%)
Query: 111 REKGLNKVPILLPEA------TTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVA 164
R+ N++ + P+A T L L N ITE+ F L+ + L+ N+I+ +
Sbjct: 11 RDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIAKGLFDGLVSLQLLLLNANKINCLR 70
Query: 165 VDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRY 224
V+ FQ L++L L+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+
Sbjct: 71 VNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDN 130
Query: 225 PRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEK 284
P +C +P + + I I +F+CSGS + RS+
Sbjct: 131 PIETSGARCSSPRRLANKRISQIKSKKFRCSGSE-DYRSRF------------------- 170
Query: 285 PTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSY 344
+ EC + CP CRC IVDC + L ++P LPE T+L D VL +
Sbjct: 171 -SSECFMDLVCPEKCRCEGTIVDCSNQKLVRIPSHLPEYVTDLRLN---DNEVSVLEATG 226
Query: 345 ISNNFKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLR 403
I FK+ N R L N I E+ AF ++ + L N + + + F L+
Sbjct: 227 I---FKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLK 283
Query: 404 RM 405
+
Sbjct: 284 TL 285
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TL+ N+++ +P+G F +L L L + N CDC L WL W+K + +C +P
Sbjct: 504 TLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSSPE 563
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ + +L P H F+C GPV+
Sbjct: 564 PMADRLLLTTPTHRFQCKGPVD 585
>gi|308488251|ref|XP_003106320.1| CRE-SLT-1 protein [Caenorhabditis remanei]
gi|308254310|gb|EFO98262.1| CRE-SLT-1 protein [Caenorhabditis remanei]
Length = 857
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 129/435 (29%), Positives = 192/435 (44%), Gaps = 81/435 (18%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLN N LT + A R R L + N + CDC L W+ +WL++ T C P
Sbjct: 170 TLNGNRLTTFEEPSNA---RFRQLDLFNNPWNCDCRLRWMKKWLEKQEGTN-KTVCSTPL 225
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGE-CAAEPSCPHPCRCADGIVDCREKGLNKVPILL 122
+++G +I ++ + CSG ++ + C CP PC C VDCRE GL VP L
Sbjct: 226 NLQGSSIQNLQDEFMTCSGNRKRRYKKTCENAEICPLPCTCTGTTVDCRESGLTYVPTNL 285
Query: 123 PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNN 182
P +TTE+RLEQN I+ +P +F N K L R+DLSKN I+++ AF GL++L +L L N
Sbjct: 286 PPSTTEIRLEQNQISSIPSNSFNNLKNLTRLDLSKNVITEIFPKAFYGLQNLHTLVLYGN 345
Query: 183 NLTYL------------------------------------------------PDGVFAE 194
N+T L + F
Sbjct: 346 NITDLKSDTFEGLGSLQLLLLNANQLTCIRRGTFDHVPKLNMLSLYDNNIRSISEVTFKN 405
Query: 195 LFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
L L TL +++N ICDC+L WL + + +C P ++ + +P ++FKC
Sbjct: 406 LTSLSTLHLAKNPLICDCNLQWLSQLNLQKNIETSGARCEQPKRLRKKKFATLPPNKFKC 465
Query: 255 SGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLN 314
GS + K C + CP C C VDC ++GL
Sbjct: 466 KGSESF---------------------ITKLADSCFIDSICPTQCDCYGTTVDCNKRGLT 504
Query: 315 KVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFA 373
+P +P+ TT L ++S + + V L S N + N + N IT + K+F
Sbjct: 505 AIPPSIPQFTTHL--LLSGNNITTVDLTS----NTQLLENLEVLDISSNHITNINDKSFD 558
Query: 374 NYKRLRRIRLEQNDI 388
K+LR +RL +N +
Sbjct: 559 KLKKLRELRLNENKL 573
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 185/450 (41%), Gaps = 81/450 (18%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +NN+ + + F L L TL +++N ICDC+L WL + + +C P
Sbjct: 389 SLYDNNIRSISEVTFKNLTSLSTLHLAKNPLICDCNLQWLSQLNLQKNIETSGARCEQPK 448
Query: 64 HIKGQNILDIPEHEFKCSGP---VEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
++ + +P ++FKC G + K C + CP C C VDC ++GL +P
Sbjct: 449 RLRKKKFATLPPNKFKCKGSESFITKLADSCFIDSICPTQCDCYGTTVDCNKRGLTAIPP 508
Query: 121 LLPEATTELRLEQNDITELPPKAFANY-KRLRRIDLSKNQISKVAVDAFQGLKSLTSLTL 179
+P+ TT L L N+IT + + + L +D+S N I+ + +F LK L L L
Sbjct: 509 SIPQFTTHLLLSGNNITTVDLTSNTQLLENLEVLDISSNHITNINDKSFDKLKKLRELRL 568
Query: 180 NNNNLTYLPDGV-------------------FAELF-----RLRTLRISENSFICDCHLS 215
N N L + V F+ +F R++ +R+ N+ +CDC +
Sbjct: 569 NENKLHHFSSSVLDEKSSLEILDLSDNNIQCFSSIFFNKAPRIKEIRVLGNNLLCDCRIL 628
Query: 216 WLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPE-HEFKCSGSSMETRSKIYREECSTDF 274
L WL+ +I+D+P +F + + + R+ C+
Sbjct: 629 PLMSWLRS----------------NSSHIIDVPPCQQF------LHSDEESDRQRCAA-- 664
Query: 275 HPYNSCPVEKPTGECAAEPS-CPHPCRCADGIVDCREKGLNKVPILLPEATTEL----TY 329
P C+ + + CP C C D +V C K L P +P TTEL Y
Sbjct: 665 ---------FPEETCSDDSNLCPPKCSCLDRVVRCSNKNLTSFPSRIPFDTTELYLDANY 715
Query: 330 MVSIDRVDKVLLY-------------SYISNNFKRWTNRSRR-LEQNDITELPPKAFANY 375
+ I D LY S +N F T S + N + L P AF
Sbjct: 716 INEIPAHDLNRLYYLTKLDLSHNRLISLENNTFSNLTRLSTLIISYNKLRCLQPHAFNGL 775
Query: 376 KRLRRIRLEQNDITELPPKAFANYKRLRRM 405
LR + L NDI+ LP AF N + +
Sbjct: 776 NSLRILSLHGNDISFLPESAFMNLTSITHI 805
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 145/382 (37%), Gaps = 129/382 (33%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITE----------------- 138
+CP C C D V C +GL VP +P T L L++N+IT+
Sbjct: 16 TCPTECLCIDRSVSCIGQGLTDVPPGIPNDTVRLELQENEITKIGAEDLRGLTSLKVLQL 75
Query: 139 -------------------------------LPPKAFANYKRLRRIDLSKNQISKVAVDA 167
LP F N +L +DLS+N ++ V
Sbjct: 76 MDNQLVAIHNLAFSSLGSLHKLRLTRNRIRHLPDNLFKNNLKLSHLDLSENDLTVVTDAQ 135
Query: 168 FQG------------------------LKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRI 203
QG SL LTLN N LT + A R R L +
Sbjct: 136 LQGPEFLEILNLDKNHIFCLENNVISSWASLEVLTLNGNRLTTFEEPSNA---RFRQLDL 192
Query: 204 SENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
N + CDC L W+ +WL++ T C P +++G +I ++ + CSG+ R
Sbjct: 193 FNNPWNCDCRLRWMKKWLEKQEGTN-KTVCSTPLNLQGSSIQNLQDEFMTCSGN----RK 247
Query: 264 KIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEA 323
+ Y++ C AE CP PC C VDCRE GL VP LP +
Sbjct: 248 RRYKKTCEN------------------AEI-CPLPCTCTGTTVDCRESGLTYVPTNLPPS 288
Query: 324 TTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRL 383
TTE+ RLEQN I+ +P +F N K L R+ L
Sbjct: 289 TTEI------------------------------RLEQNQISSIPSNSFNNLKNLTRLDL 318
Query: 384 EQNDITELPPKAFANYKRLRRM 405
+N ITE+ PKAF + L +
Sbjct: 319 SKNVITEIFPKAFYGLQNLHTL 340
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 123/282 (43%), Gaps = 51/282 (18%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++NN+ F + R++ +R+ N+ +CDC + L WL+
Sbjct: 592 LSDNNIQCFSSIFFNKAPRIKEIRVLGNNLLCDCRILPLMSWLRS--------------- 636
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPS---------CPHPCRCADGIVDCREKGL 115
+I+D+P + E CAA P CP C C D +V C K L
Sbjct: 637 -NSSHIIDVPPCQQFLHSDEESDRQRCAAFPEETCSDDSNLCPPKCSCLDRVVRCSNKNL 695
Query: 116 NKVPILLPEATTELRLEQNDITELPP------------------------KAFANYKRLR 151
P +P TTEL L+ N I E+P F+N RL
Sbjct: 696 TSFPSRIPFDTTELYLDANYINEIPAHDLNRLYYLTKLDLSHNRLISLENNTFSNLTRLS 755
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICD 211
+ +S N++ + AF GL SL L+L+ N++++LP+ F L + + + NS CD
Sbjct: 756 TLIISYNKLRCLQPHAFNGLNSLRILSLHGNDISFLPESAFMNLTSITHIAVGSNSLYCD 815
Query: 212 CHLSWLHRWLK-RYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
C+L+W +W+K ++ G+ +C P + Q +L ++F
Sbjct: 816 CNLAWFSKWIKSKFIEAGI-ARCEYPVSLGNQLLLTAQPYQF 856
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTKCFAP 62
+L+ N++++LP+ F L + + + NS CDC+L+W +W+K ++ G+ +C P
Sbjct: 782 SLHGNDISFLPESAFMNLTSITHIAVGSNSLYCDCNLAWFSKWIKSKFIEAGI-ARCEYP 840
Query: 63 SHIKGQNILDIPEHEF 78
+ Q +L ++F
Sbjct: 841 VSLGNQLLLTAQPYQF 856
>gi|354506312|ref|XP_003515208.1| PREDICTED: slit homolog 2 protein-like, partial [Cricetulus
griseus]
Length = 765
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 132/463 (28%), Positives = 200/463 (43%), Gaps = 95/463 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 97 SLYDNKLQTVAKGTFSALRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 156
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K +G+C A+ +CP CRC VDC
Sbjct: 157 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSN 216
Query: 113 KGLNKVPILLPEATTELRLEQND-------------------------ITELPPKAFANY 147
+ LNK+P +P+ T ELRL N+ IT++ AF
Sbjct: 217 QKLNKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGA 276
Query: 148 KRLRRIDLS------------------------KNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ I L+ N+IS V D+F GL S+ L+L +N
Sbjct: 277 TGVNEILLTSNRLENVQHKMFKGLENVKTLMLRSNRISCVGNDSFIGLGSVRLLSLYDNQ 336
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N F C+CHL+WL WL++ + +C P +K
Sbjct: 337 ITTIAPGAFDTLHSLSTLNLLANPFNCNCHLAWLGEWLRKKRIVTGNPRCQKPYFLKEIP 396
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCA 302
I D+ +F C D + NSC P+ + CP C C
Sbjct: 397 IQDVAIQDFTCD-----------------DGNDDNSCSPLSR----------CPSECTCL 429
Query: 303 DGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQN 362
D +V C KGL +P +P TEL +D L+ +S N+K T L N
Sbjct: 430 DTVVRCSNKGLKFLPKGIPRDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNN 482
Query: 363 DITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I+ L ++F+N +L + L N + +PP+ F K LR +
Sbjct: 483 RISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 525
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 132/277 (47%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+CHL+WL WL++ + +C P
Sbjct: 331 SLYDNQITTIAPGAFDTLHSLSTLNLLANPFNCNCHLAWLGEWLRKKRIVTGNPRCQKPY 390
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + C+ CP C C D +V C KGL +P +P
Sbjct: 391 FLKEIPIQDVAIQDFTCDDGNDD--NSCSPLSRCPSECTCLDTVVRCSNKGLKFLPKGIP 448
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAF--------------- 168
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 449 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 507
Query: 169 ---------QGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 508 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 567
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 568 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFACQG 604
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 143/325 (44%), Gaps = 68/325 (20%)
Query: 130 RLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPD 189
RLEQN I +PP AF+ YK+LRRIDLS NQIS++A DAFQGL+SL SL L N +T LP
Sbjct: 1 RLEQNSIRVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPK 60
Query: 190 ------------------------------------------------GVFAELFRLRTL 201
G F+ L ++T+
Sbjct: 61 SLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSALRAIQTM 120
Query: 202 RISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMET 261
+++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 121 HLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSAKEQY- 179
Query: 262 RSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 321
F P K +G+C A+ +CP CRC VDC + LNK+P +P
Sbjct: 180 ------------FIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPDHIP 227
Query: 322 EATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFANYKRLRR 380
+ T EL ++ + +L + + FK+ R N IT++ AF +
Sbjct: 228 QYTAEL----RLNNNEFTVLEA--TGIFKKLPQLRKINFSNNKITDIEEGAFEGATGVNE 281
Query: 381 IRLEQNDITELPPKAFANYKRLRRM 405
I L N + + K F + ++ +
Sbjct: 282 ILLTSNRLENVQHKMFKGLENVKTL 306
>gi|32566206|ref|NP_510437.2| Protein SLT-1 [Caenorhabditis elegans]
gi|449061890|sp|G5EFX6.1|SLIT1_CAEEL RecName: Full=Slit homolog 1 protein; Short=Slt-1; Flags: Precursor
gi|25004960|emb|CAA93668.3| Protein SLT-1 [Caenorhabditis elegans]
Length = 1410
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 129/436 (29%), Positives = 192/436 (44%), Gaps = 83/436 (19%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLN N LT + A R R L + N + CDC L W+ +WL++ T C P
Sbjct: 170 TLNGNRLTTFEEPSNA---RFRQLDLFNNPWNCDCRLRWMRKWLEKAEGQN-KTVCATPL 225
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGE-CAAEPSCPHPCRCADGIVDCREKGLNKVPILL 122
+++G +I + + CSG ++ + C CP PC C VDCR+ GL VP L
Sbjct: 226 NLQGSSIEILQDKFMTCSGNRKRRYKKTCETAEICPLPCTCTGTTVDCRDSGLTYVPTNL 285
Query: 123 PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNN 182
P +TTE+RLEQN I+ +P +F N K L R+DLSKN I+++ AF GL +L +L L N
Sbjct: 286 PPSTTEIRLEQNQISSIPSHSFKNLKNLTRLDLSKNIITEIQPKAFLGLHNLHTLVLYGN 345
Query: 183 NLTYL------------------------------------------------PDGVFAE 194
N+T L + F
Sbjct: 346 NITDLKSDTFEGLGSLQLLLLNANQLTCIRRGTFDHVPKLSMLSLYDNDIKSISEVTFQN 405
Query: 195 LFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
L L TL +++N ICDC+L WL + + +C P ++ + +P ++FKC
Sbjct: 406 LTSLSTLHLAKNPLICDCNLQWLAQINLQKNIETSGARCEQPKRLRKKKFATLPPNKFKC 465
Query: 255 SGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLN 314
GS E+ +Y + C D CP C C VDC ++GLN
Sbjct: 466 KGS--ESFVSMYADSCFID-------------------SICPTQCDCYGTTVDCNKRGLN 504
Query: 315 KVPILLPEATTELTYMVSIDRVDKVLLYS--YISNNFKRWTNRSRRLEQNDITELPPKAF 372
+P +P T+L ++S + + V L S ++ N + L N IT + K+F
Sbjct: 505 TIPTSIPRFATQL--LLSGNNISTVDLNSNIHVLENLEVLD-----LSNNHITFINDKSF 557
Query: 373 ANYKRLRRIRLEQNDI 388
+LR +RL N +
Sbjct: 558 EKLSKLRELRLNDNKL 573
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 186/451 (41%), Gaps = 83/451 (18%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N++ + + F L L TL +++N ICDC+L WL + + +C P
Sbjct: 389 SLYDNDIKSISEVTFQNLTSLSTLHLAKNPLICDCNLQWLAQINLQKNIETSGARCEQPK 448
Query: 64 HIKGQNILDIPEHEFKCSGP---VEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
++ + +P ++FKC G V C + CP C C VDC ++GLN +P
Sbjct: 449 RLRKKKFATLPPNKFKCKGSESFVSMYADSCFIDSICPTQCDCYGTTVDCNKRGLNTIPT 508
Query: 121 LLPEATTELRLEQNDITELPPKAFANY-KRLRRIDLSKNQISKVAVDAFQGLKSLTSLTL 179
+P T+L L N+I+ + + + + L +DLS N I+ + +F+ L L L L
Sbjct: 509 SIPRFATQLLLSGNNISTVDLNSNIHVLENLEVLDLSNNHITFINDKSFEKLSKLRELRL 568
Query: 180 NNNNLTYLPDGV-------------------FAELF-----RLRTLRISENSFICDCHLS 215
N+N L + V F+ +F R+R +++ N +CDC +
Sbjct: 569 NDNKLHHFSSMVLDEQSNLEILDLSGNNIQCFSSIFFNKATRIREIKVIGNDLLCDCRIL 628
Query: 216 WLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPE-HEFKCSGS-SMETRSKIYREE-CST 272
L WL+ + +DIP +F+ S + S + R + EE CS
Sbjct: 629 PLMSWLRS----------------NSSHSIDIPPCQQFQYSDNESDKQRCAAFPEETCSD 672
Query: 273 DFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL----T 328
D + CP C C D +V C K L P +P TTEL
Sbjct: 673 DSNL------------------CPPKCSCLDRVVRCSNKNLTSFPSRIPFDTTELYLDAN 714
Query: 329 YMVSIDRVDKVLLYSYI-------------SNNFKRWTNRSRR-LEQNDITELPPKAFAN 374
Y+ I D LYS +N F T S + N + L P AF
Sbjct: 715 YINEIPAHDLNRLYSLTKLDLSHNRLISLENNTFSNLTRLSTLIISYNKLRCLQPLAFNG 774
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
LR + L NDI+ LP AF+N + +
Sbjct: 775 LNALRILSLHGNDISFLPQSAFSNLTSITHI 805
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 145/379 (38%), Gaps = 123/379 (32%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITE----------------- 138
+CP C C D V C + L +VP +P T L L+ N+IT+
Sbjct: 16 TCPAECVCVDRTVSCVGQQLTEVPQNIPNDTIRLDLQDNEITKIGPNDFSSLMNLKALQL 75
Query: 139 -------------------------------LPPKAFANYKRLRRIDLSKNQISKVAVDA 167
LP F N +L +DLS+N I+ V+
Sbjct: 76 MDNQIVTIHNQSFSSLVFLQKLRLSRNRIRHLPDNVFQNNLKLTHLDLSENDITVVSDAQ 135
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELF---------------------RLRTLRISEN 206
QG + L L L+ N++ L + V + R R L + N
Sbjct: 136 LQGPEFLEVLNLDKNHIFCLENNVISSWVSLEVLTLNGNRLTTFEEPSNARFRQLDLFNN 195
Query: 207 SFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIY 266
+ CDC L W+ +WL++ T C P +++G +I + + CSG+ R + Y
Sbjct: 196 PWNCDCRLRWMRKWLEKAEGQN-KTVCATPLNLQGSSIEILQDKFMTCSGN----RKRRY 250
Query: 267 REECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTE 326
++ C T AE CP PC C VDCR+ GL VP LP +TTE
Sbjct: 251 KKTCET------------------AEI-CPLPCTCTGTTVDCRDSGLTYVPTNLPPSTTE 291
Query: 327 LTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQN 386
+ RLEQN I+ +P +F N K L R+ L +N
Sbjct: 292 I------------------------------RLEQNQISSIPSHSFKNLKNLTRLDLSKN 321
Query: 387 DITELPPKAFANYKRLRRM 405
ITE+ PKAF L +
Sbjct: 322 IITEIQPKAFLGLHNLHTL 340
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 125/285 (43%), Gaps = 53/285 (18%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ NN+ F + R+R +++ N +CDC + L WL+
Sbjct: 592 LSGNNIQCFSSIFFNKATRIREIKVIGNDLLCDCRILPLMSWLRS--------------- 636
Query: 65 IKGQNILDIPE-HEFKCSGPVEKPTGECAAEPS---------CPHPCRCADGIVDCREKG 114
+ +DIP +F+ S E CAA P CP C C D +V C K
Sbjct: 637 -NSSHSIDIPPCQQFQYSDN-ESDKQRCAAFPEETCSDDSNLCPPKCSCLDRVVRCSNKN 694
Query: 115 LNKVPILLPEATTELRLEQNDITELPP------------------------KAFANYKRL 150
L P +P TTEL L+ N I E+P F+N RL
Sbjct: 695 LTSFPSRIPFDTTELYLDANYINEIPAHDLNRLYSLTKLDLSHNRLISLENNTFSNLTRL 754
Query: 151 RRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFIC 210
+ +S N++ + AF GL +L L+L+ N++++LP F+ L + + + NS C
Sbjct: 755 STLIISYNKLRCLQPLAFNGLNALRILSLHGNDISFLPQSAFSNLTSITHIAVGSNSLYC 814
Query: 211 DCHLSWLHRWLK-RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
DC+++W +W+K ++ G+ +C P+ + Q +L ++F C
Sbjct: 815 DCNMAWFSKWIKSKFIEAGI-ARCEYPNTVSNQLLLTAQPYQFTC 858
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTKCFAP 62
+L+ N++++LP F+ L + + + NS CDC+++W +W+K ++ G+ +C P
Sbjct: 782 SLHGNDISFLPQSAFSNLTSITHIAVGSNSLYCDCNMAWFSKWIKSKFIEAGI-ARCEYP 840
Query: 63 SHIKGQNILDIPEHEFKCSGPV 84
+ + Q +L ++F C V
Sbjct: 841 NTVSNQLLLTAQPYQFTCDSKV 862
>gi|16118485|gb|AAL14445.1|AF387318_1 slit-3, partial [Gallus gallus]
Length = 1095
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/452 (26%), Positives = 191/452 (42%), Gaps = 100/452 (22%)
Query: 25 RTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGPV 84
+TL +++N F+CDCHL WL +L+ P +C P + + I I +F+CSG
Sbjct: 1 QTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSNPRRLANKRISQIKSKKFRCSGSE 60
Query: 85 E---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPP 141
+ K TG+C + CP CRC +VDC + L ++P LPE TT+LRL NDI+ L
Sbjct: 61 DYRSKFTGKCFMDLVCPEKCRCEGTVVDCSNQKLTRLPSHLPEYTTDLRLNDNDISVLEA 120
Query: 142 KA-FANYKRLRRIDLS------------------------KNQISKVAVDAFQGLKSLTS 176
F LR+I+LS +NQ+ V F+GL L +
Sbjct: 121 IGLFKKLPNLRKINLSNNKIKEIREGTFDGASGVQELILTENQLESVHGRMFRGLTGLKT 180
Query: 177 LTLNNNNLTYLPD------------------------GVFAELFRLRTLRISENSFICDC 212
L L +N+++ + + G F+ L L T+ + NSF C+C
Sbjct: 181 LMLRSNSISCINNDTFAGLSSVRLLSLYDNHISTITPGAFSTLVSLSTINLLANSFNCNC 240
Query: 213 HLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECST 272
HL+WL +WL++ + +C P +K I D+ +F C G+ +
Sbjct: 241 HLAWLGKWLRKKRIVSGNPRCLKPFFLKDIPIQDVDAQDFTCEGNDESS----------- 289
Query: 273 DFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL----- 327
C P CP C C D +V C KGL +P +P+ TEL
Sbjct: 290 ----------------CLLSPPCPSQCTCVDSVVRCSNKGLRVMPKGIPKDVTELYLEGN 333
Query: 328 --------------TYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFA 373
++ + +L +Y +N + + + L N + +P AF
Sbjct: 334 HLTAVPKGLSAFRHLTLIDLSNNSISVLANYTFSNMTQLS--TLILSYNRLRCIPVHAFN 391
Query: 374 NYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ LR + L NDI+ +P +F + L +
Sbjct: 392 GLRSLRVLTLHGNDISSVPEGSFNDLVSLSHL 423
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 92/275 (33%), Positives = 138/275 (50%), Gaps = 28/275 (10%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N+++ + G F+ L L T+ + NSF C+CHL+WL +WL++ + +C P
Sbjct: 206 SLYDNHISTITPGAFSTLVSLSTINLLANSFNCNCHLAWLGKWLRKKRIVSGNPRCLKPF 265
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C D +V C KGL +P +P
Sbjct: 266 FLKDIPIQDVDAQDFTCEGNDES---SCLLSPPCPSQCTCVDSVVRCSNKGLRVMPKGIP 322
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVA------------------- 164
+ TEL LE N +T +P K + ++ L IDLS N IS +A
Sbjct: 323 KDVTELYLEGNHLTAVP-KGLSAFRHLTLIDLSNNSISVLANYTFSNMTQLSTLILSYNR 381
Query: 165 -----VDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
V AF GL+SL LTL+ N+++ +P+G F +L L L + N CDC+L WL
Sbjct: 382 LRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLVSLSHLALGTNPLHCDCNLRWLSE 441
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
W+K + +C P + + +L P H F+C
Sbjct: 442 WVKAGYKEPGIARCSGPEAMVDRLLLTTPTHHFQC 476
>gi|312067432|ref|XP_003136740.1| hypothetical protein LOAG_01152 [Loa loa]
gi|307768100|gb|EFO27334.1| hypothetical protein LOAG_01152 [Loa loa]
Length = 1232
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 193/443 (43%), Gaps = 77/443 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLN+NNL+ + G + LR LR++EN ++CDC L W+ + + L L T+C P+
Sbjct: 5 TLNSNNLSTM--GQLGPMSNLRVLRLAENPWLCDCRLRWMKKIISNSHSLALNTRCHRPA 62
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H+ + + +I E KCSG ++ C CP C C + +DCR++GL +P LP
Sbjct: 63 HLYSRMLENIDETLMKCSGIEKRAATSCRDASICPSVCTCTETTIDCRDRGLTHIPANLP 122
Query: 124 EATTELRLEQNDIT------------------------ELPPKAFANYKRLRRIDLSKNQ 159
TTELRLEQN IT ++ P+AF K L + L N
Sbjct: 123 PTTTELRLEQNQITYVPPRAFYNLHQLKRLDLSKNNIGDIGPRAFDGLKSLNSLVLYGNN 182
Query: 160 ISKVAVDAFQGLKSLTSLTLN------------------------NNNLTYLPDGVFAEL 195
IS + +AF GL +L L LN +N + + +G F L
Sbjct: 183 ISNLPSEAFHGLANLQLLLLNANKLICLRKDTFSSLTNLNLLSLYDNQIHSIANGTFDGL 242
Query: 196 FRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
L TL ++ N ICDC+L WL L + +C +P + + I + +++C
Sbjct: 243 TNLTTLHLARNPIICDCNLEWLAHLLAKKAVETSSARCDSPKRVAHRRISTLHHSKYRCK 302
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 315
GS V G C + CP C C + VDC +G
Sbjct: 303 GSEAY---------------------VTANAGRCIIDHPCPVGCSCLNTFVDCSNRGWTD 341
Query: 316 VPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANY 375
P LP TTEL +S +++ + L + + +F+ T + L+ N+I + + +
Sbjct: 342 FPRKLPRYTTEL--RMSNNKITAIRLSTNL--HFENLT--TLLLDGNEIEFIESNSLSGL 395
Query: 376 KRLRRIRLEQNDITELPPKAFAN 398
+++ + L +N + F N
Sbjct: 396 GKVQELDLSRNKLRYFSTAVFGN 418
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 181/446 (40%), Gaps = 74/446 (16%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
+N + + +G F L L TL ++ N ICDC+L WL L + +C +P +
Sbjct: 228 DNQIHSIANGTFDGLTNLTTLHLARNPIICDCNLEWLAHLLAKKAVETSSARCDSPKRVA 287
Query: 67 GQNILDIPEHEFKCSGP---VEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+ I + +++C G V G C + CP C C + VDC +G P LP
Sbjct: 288 HRRISTLHHSKYRCKGSEAYVTANAGRCIIDHPCPVGCSCLNTFVDCSNRGWTDFPRKLP 347
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
TTELR+ N IT + +++ L + L N+I + ++ GL + L L+ N
Sbjct: 348 RYTTELRMSNNKITAIRLSTNLHFENLTTLLLDGNEIEFIESNSLSGLGKVQELDLSRNK 407
Query: 184 LTYLPDGVF-------------------------AELFRLRTLRISENSFICDCHL-SWL 217
L Y VF A+L L+++ + N F+C+CH+ ++
Sbjct: 408 LRYFSTAVFGNGSLQITKLNLSHNQIKCFSADSLAQLATLKSVSLDGNDFVCNCHIVDFV 467
Query: 218 HRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPY 277
H R C P ++G+ + + + E C+ ET + E+
Sbjct: 468 HYLRMNGSRFLNSVLCHEPIQLRGRMMTSLKKDELFCT----ETMENVCVED-------- 515
Query: 278 NSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRV- 336
CP C C + +V C K L K P +P TTEL ++ S D V
Sbjct: 516 --------------GNYCPTGCTCHETVVRCSNKNLKKFPADIPVETTEL-FLDSNDIVL 560
Query: 337 -------DKVLLYSYISNN---------FKRWTNRSRR-LEQNDITELPPKAFANYKRLR 379
K L+ +S+N F T S L N + L +AF + LR
Sbjct: 561 IPPELNKLKHLVKLDLSHNRIVAIENGAFANLTKLSTLILSFNKLECLEEEAFTHLTSLR 620
Query: 380 RIRLEQNDITELPPKAFANYKRLRRM 405
+ L NDI+ LP AFAN + +
Sbjct: 621 ILSLHGNDISVLPESAFANLHNITHI 646
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 133/275 (48%), Gaps = 28/275 (10%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHL-SWLHRWLKRYPRLGLYTKCFAPS 63
L++N + A+L L+++ + N F+C+CH+ ++H R C P
Sbjct: 428 LSHNQIKCFSADSLAQLATLKSVSLDGNDFVCNCHIVDFVHYLRMNGSRFLNSVLCHEPI 487
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++G+ + + + E C+ +E E CP C C + +V C K L K P +P
Sbjct: 488 QLRGRMMTSLKKDELFCTETMENVCVE--DGNYCPTGCTCHETVVRCSNKNLKKFPADIP 545
Query: 124 EATTELRLEQNDITELPPK-----------------------AFANYKRLRRIDLSKNQI 160
TTEL L+ NDI +PP+ AFAN +L + LS N++
Sbjct: 546 VETTELFLDSNDIVLIPPELNKLKHLVKLDLSHNRIVAIENGAFANLTKLSTLILSFNKL 605
Query: 161 SKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW 220
+ +AF L SL L+L+ N+++ LP+ FA L + + + NS CDCH++W RW
Sbjct: 606 ECLEEEAFTHLTSLRILSLHGNDISVLPESAFANLHNITHIALGSNSLYCDCHIAWFSRW 665
Query: 221 LK-RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
+K R+ G+ +C P + + Q +L E +FKC
Sbjct: 666 IKSRFIEAGI-ARCELPLNFRNQLLLSADELQFKC 699
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 107/229 (46%), Gaps = 56/229 (24%)
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAP 236
LTLN+NNL+ + G + LR LR++EN ++CDC L W+ + + L L T+C P
Sbjct: 4 LTLNSNNLSTM--GQLGPMSNLRVLRLAENPWLCDCRLRWMKKIISNSHSLALNTRCHRP 61
Query: 237 SHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCP 296
+H+ + + +I E KCSG +E R+ C CP
Sbjct: 62 AHLYSRMLENIDETLMKCSG--IEKRAAT----------------------SCRDASICP 97
Query: 297 HPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRS 356
C C + +DCR++GL +P LP TTEL
Sbjct: 98 SVCTCTETTIDCRDRGLTHIPANLPPTTTEL----------------------------- 128
Query: 357 RRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN IT +PP+AF N +L+R+ L +N+I ++ P+AF K L +
Sbjct: 129 -RLEQNQITYVPPRAFYNLHQLKRLDLSKNNIGDIGPRAFDGLKSLNSL 176
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTKCFAP 62
+L+ N+++ LP+ FA L + + + NS CDCH++W RW+K R+ G+ +C P
Sbjct: 623 SLHGNDISVLPESAFANLHNITHIALGSNSLYCDCHIAWFSRWIKSRFIEAGI-ARCELP 681
Query: 63 SHIKGQNILDIPEHEFKCSGPVEK 86
+ + Q +L E +FKC V K
Sbjct: 682 LNFRNQLLLSADELQFKCVEKVPK 705
>gi|405960145|gb|EKC26090.1| Protein slit [Crassostrea gigas]
Length = 1080
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/459 (26%), Positives = 196/459 (42%), Gaps = 77/459 (16%)
Query: 16 GVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPE 75
G+ + ++ N FICDC++ WL +L + P +C AP +K + I
Sbjct: 30 GLLMRFLTVYFRHLARNPFICDCNMQWLTEYLHQNPIETSIARCEAPGRMKRKKIATARV 89
Query: 76 HEFKCSGPV---EKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLE 132
+FKC G K G+C + CP C C +VDC + L ++P LP TT+L+L+
Sbjct: 90 EKFKCKGSEFHRTKNAGQCEIDLECPRQCVCQGTVVDCSNRHLTEIPQDLPIYTTKLQLQ 149
Query: 133 QNDI-------------------------TELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
N I E+ F ++L ++LS N+I K+ +
Sbjct: 150 NNQIEKLEANGLFSKLENLQVLDLSSNRLQEIEEGTFNGARKLIDVNLSSNRIGKLLGKS 209
Query: 168 FQGLKSLTSLTLNNNNLTYL------------------------PDGVFAELFRLRTLRI 203
+GL+++ +L + N +T L +G F + L L +
Sbjct: 210 LRGLETVRTLAIEKNRITCLSNTTLNAMTELRQLSLYSNEIRCISEGAFDKQNFLTILNL 269
Query: 204 SENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
N F C+CH+SWL WLK+ CF P+ K +L++ E +F C + ++
Sbjct: 270 ESNPFNCNCHMSWLSSWLKKSKVSAGEPTCFLPTPHKNTPLLNLKEDQFICP-TDIDV-- 326
Query: 264 KIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEA 323
C+T P S V+ G C CP C C +V C K LN+VP L+P+
Sbjct: 327 -----GCNTGISPCCSETVDTAVGSCDPRAYCPPKCTCTGTVVRCSRKELNEVPALIPDD 381
Query: 324 TTELTYMVS--------IDRVDKVLLYSYISNN--------FKRWTNRSRR-LEQNDITE 366
TTEL V+ I R+ K+ +NN F +TN + L N +
Sbjct: 382 TTELYLDVNNIRSLPSEIGRLTKLQRLDLSNNNLVTLPDHIFSNFTNLATLILSYNQLEC 441
Query: 367 LPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ P +F+ +LR + L N+I+ +P AF + L +
Sbjct: 442 MAPTSFSGLHKLRILSLHGNNISSIPYGAFKDLTSLTHL 480
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 136/293 (46%), Gaps = 41/293 (13%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + + +G F + L L + N F C+CH+SWL WLK+ CF P+
Sbjct: 244 SLYSNEIRCISEGAFDKQNFLTILNLESNPFNCNCHMSWLSSWLKKSKVSAGEPTCFLPT 303
Query: 64 HIKGQNILDIPEHEFKC----------------SGPVEKPTGECAAEPSCPHPCRCADGI 107
K +L++ E +F C S V+ G C CP C C +
Sbjct: 304 PHKNTPLLNLKEDQFICPTDIDVGCNTGISPCCSETVDTAVGSCDPRAYCPPKCTCTGTV 363
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKA-----------------------F 144
V C K LN+VP L+P+ TTEL L+ N+I LP + F
Sbjct: 364 VRCSRKELNEVPALIPDDTTELYLDVNNIRSLPSEIGRLTKLQRLDLSNNNLVTLPDHIF 423
Query: 145 ANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRIS 204
+N+ L + LS NQ+ +A +F GL L L+L+ NN++ +P G F +L L L +
Sbjct: 424 SNFTNLATLILSYNQLECMAPTSFSGLHKLRILSLHGNNISSIPYGAFKDLTSLTHLALG 483
Query: 205 ENSFICDCHLSWLHRWLKR-YPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
N CDC+L WL W+K+ Y G+ + C P+ + + +L F C+G
Sbjct: 484 GNQLYCDCNLKWLSDWIKKDYVESGIAS-CVGPASMLNKLLLTTQSSLFVCNG 535
>gi|335307981|ref|XP_003361055.1| PREDICTED: slit homolog 2 protein-like, partial [Sus scrofa]
Length = 711
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/463 (27%), Positives = 199/463 (42%), Gaps = 95/463 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 194 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 253
Query: 64 HIKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCRE 112
+ + I I +F+CS + K +G+C A+ +CP CRC VDC
Sbjct: 254 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSN 313
Query: 113 KGLNKVPILLPEATTELRLEQND-------------------------ITELPPKAFANY 147
+ L+K+P +P+ T ELRL N+ IT++ AF
Sbjct: 314 QKLSKIPDHIPQYTAELRLNNNEFTVXXATGIFKKLPQLRKINFSNNKITDIEEGAFEGA 373
Query: 148 KRLRRIDLSKNQISKVAVDAFQGLKSLTS------------------------LTLNNNN 183
+ I L+ N++ V F+GL+SL + L+L +N
Sbjct: 374 SGVNEILLTSNRLENVQYKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQ 433
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T + G F L L TL + N F C+C+L+WL WL++ + +C P +K
Sbjct: 434 ITTIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIP 493
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCA 302
I D+ +F C D + NSC P+ + CP C C
Sbjct: 494 IQDVAIQDFTCD-----------------DGNDDNSCSPLSR----------CPTECTCL 526
Query: 303 DGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQN 362
D +V C K L +P +P TEL +D L+ +S N+K T L N
Sbjct: 527 DTVVRCSNKALKVLPKGIPRDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNN 579
Query: 363 DITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I+ L ++F+N +L + L N + LPP+ F K LR +
Sbjct: 580 RISTLSNQSFSNMTQLLTLILSYNRLRCLPPRTFDGLKSLRLL 622
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 131/277 (47%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 428 SLYDNQITTIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 487
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + C+ CP C C D +V C K L +P +P
Sbjct: 488 FLKEIPIQDVAIQDFTCDDGNDD--NSCSPLSRCPTECTCLDTVVRCSNKALKVLPKGIP 545
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 546 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 604
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 605 LRCLPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 664
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 665 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 701
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 138/325 (42%), Gaps = 68/325 (20%)
Query: 130 RLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPD 189
RLEQN I +PP AF+ YK+LRRIDLS NQIS++A DAFQGL+SL SL L N +T LP
Sbjct: 98 RLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPK 157
Query: 190 ------------------------------------------------GVFAELFRLRTL 201
G F+ L ++T+
Sbjct: 158 SLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTM 217
Query: 202 RISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMET 261
+++N FICDCHL WL +L P +C +P + + I I +F+CS
Sbjct: 218 HLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSAKEQY- 276
Query: 262 RSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 321
F P K +G+C A+ +CP CRC VDC + L+K+P +P
Sbjct: 277 ------------FIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLSKIPDHIP 324
Query: 322 EATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFANYKRLRR 380
+ T EL + + FK+ R N IT++ AF +
Sbjct: 325 QYTAELRLN------NNEFTVXXATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNE 378
Query: 381 IRLEQNDITELPPKAFANYKRLRRM 405
I L N + + K F + L+ +
Sbjct: 379 ILLTSNRLENVQYKMFKGLESLKTL 403
>gi|196009620|ref|XP_002114675.1| hypothetical protein TRIADDRAFT_58750 [Trichoplax adhaerens]
gi|190582737|gb|EDV22809.1| hypothetical protein TRIADDRAFT_58750 [Trichoplax adhaerens]
Length = 1396
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 172/418 (41%), Gaps = 90/418 (21%)
Query: 21 LFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTK----CFAPSHIKGQNILDIPEH 76
L ++++ +SEN FICDC+L WL+ L + + C AP + G I
Sbjct: 400 LLNIQSILLSENPFICDCNLQWLNHQLIHNSTMRQLIRGTLICNAPRRMVGNEIGLTSSS 459
Query: 77 EFKCSGP-----VEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRL 131
+F C G + + C + CP+ C C+ V C+ K ++P +P TTELRL
Sbjct: 460 QFMCKGSEGLRTSKAGSQNCFIDWPCPNSCTCSGSKVTCKGKKFTEIPDKIPRLTTELRL 519
Query: 132 EQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSL--------TLNNNN 183
+ N+I+E+ K L + +SKN+++K+A F+ L++L L LN +
Sbjct: 520 DNNEISEITAGKLDELKYLEFLSVSKNKVTKIADGVFKDLQNLKHLFLTRNKIKCLNEDT 579
Query: 184 LTYLP----------------DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL 227
YLP +G F+ L LR++EN +CDC+L WL WL++
Sbjct: 580 FQYLPNLQYLFLPENQIVNIEEGTFSYFKSLNVLRLAENPLVCDCYLKWLAEWLRKQNVK 639
Query: 228 GLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTG 287
+CF P + G I ++ F+C G K
Sbjct: 640 ADSVQCFKPDNFHGYEIDNMKASSFQCLG---------------------------KRKD 672
Query: 288 ECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISN 347
C A CP C C VDC +GL VP L+P TT+L
Sbjct: 673 RCEAVNHCPDGCSCYGTEVDCNRRGLTTVPSLIPTDTTQLD------------------- 713
Query: 348 NFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N+IT +P AF N RL+ + L N IT + F + L ++
Sbjct: 714 -----------LSHNNITVIPDFAFKNLARLQYLFLFNNQITTIKENIFDDLVSLVKI 760
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 122/481 (25%), Positives = 184/481 (38%), Gaps = 131/481 (27%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFI-------------------------CDCH 39
L NN + L F+ L +L++LR+ N FI C+CH
Sbjct: 136 LVNNQILDLAPNSFSGLSKLKSLRLDHN-FIDCVPATSLSGLKSLLILHLKVNPLSCNCH 194
Query: 40 LSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPH 99
L+WL P+L ++ KC I G+ + ++ F C+ C+ P+CP
Sbjct: 195 LNWLADLKNSQPKLRVFGKCRTKLAINGKKTFPLGKN-FTCTESERHMNLTCSYIPACPQ 253
Query: 100 PCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQ 159
C C IVDC K L ++P LP TT+LR+ N I+ + + N K+L +IDLS N
Sbjct: 254 KCTCIGTIVDCSRKKLTEIPHHLPMETTDLRISGNRISSIKSFSLRNLKKLAKIDLSTNL 313
Query: 160 ISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLR-------------------- 199
I + +AF+ SL L L NN L +LP VF LF LR
Sbjct: 314 IEDIHPEAFKHTPSLEQLLLFNNKLKHLPTKVFNGLFDLRDLILDGNYISCIDKETFQDQ 373
Query: 200 -------------------------------TLRISENSFICDCHLSWLHRWLKRYPRLG 228
++ +SEN FICDC+L WL+ L +
Sbjct: 374 QKLKILSISRNKLSSLVYETIDPSKRLLNIQSILLSENPFICDCNLQWLNHQLIHNSTMR 433
Query: 229 LYTK----CFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEK 284
+ C AP + G I +F C GS SK + C D+
Sbjct: 434 QLIRGTLICNAPRRMVGNEIGLTSSSQFMCKGSEGLRTSKAGSQNCFIDW---------- 483
Query: 285 PTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSY 344
CP+ C C+ V C+ K ++P +P TTEL
Sbjct: 484 ---------PCPNSCTCSGSKVTCKGKKFTEIPDKIPRLTTEL----------------- 517
Query: 345 ISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRR 404
RL+ N+I+E+ K L + + +N +T++ F + + L+
Sbjct: 518 -------------RLDNNEISEITAGKLDELKYLEFLSVSKNKVTKIADGVFKDLQNLKH 564
Query: 405 M 405
+
Sbjct: 565 L 565
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 132/300 (44%), Gaps = 43/300 (14%)
Query: 8 NNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKG 67
N + + +G F+ L LR++EN +CDC+L WL WL++ +CF P + G
Sbjct: 594 NQIVNIEEGTFSYFKSLNVLRLAENPLVCDCYLKWLAEWLRKQNVKADSVQCFKPDNFHG 653
Query: 68 QNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATT 127
I ++ F+C G K C A CP C C VDC +GL VP L+P TT
Sbjct: 654 YEIDNMKASSFQCLG---KRKDRCEAVNHCPDGCSCYGTEVDCNRRGLTTVPSLIPTDTT 710
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L L N+IT +P A F+ L L L L NN +T +
Sbjct: 711 QLDLSHNNITVIPDFA------------------------FKNLARLQYLFLFNNQITTI 746
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDI 247
+ +F +L L + + +NS CDC+++WL +L + + KC P ++ Q + +
Sbjct: 747 KENIFDDLVSLVKISLEDNSLYCDCNITWLREYLLQKNVVSSGVKCKGPLKLRNQFLKRL 806
Query: 248 PEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKP---TGECAAEPSCPHPCRCADG 304
E + C+ S + H N C + KP G C + + + C+C G
Sbjct: 807 NEGQLVCNEDSTAVQ------------HTCNPC-LAKPCANNGVCFNQGNGRYRCKCPKG 853
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 138/357 (38%), Gaps = 79/357 (22%)
Query: 97 CPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDIT------------------- 137
CP C+C V CR GL +P +P+ L N +T
Sbjct: 30 CPTLCQCQRKAVSCRGAGLTVIPRSIPQDIERLDFSNNSLTSITITDFMAFNRLKTLNLS 89
Query: 138 -----------------------------ELPPKAFANYKRLRRIDLSKNQISKVAVDAF 168
E+ K F K L+R+DL NQI +A ++F
Sbjct: 90 SNAIKEIQPGSFDKLIVLEKLLLAGNKLHEIQDKVFNKLKSLKRLDLVNNQILDLAPNSF 149
Query: 169 QGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLG 228
GL L SL L++N + +P + L L L + N C+CHL+WL P+L
Sbjct: 150 SGLSKLKSLRLDHNFIDCVPATSLSGLKSLLILHLKVNPLSCNCHLNWLADLKNSQPKLR 209
Query: 229 LYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGE 288
++ KC I G+ + ++ F C+ S
Sbjct: 210 VFGKCRTKLAINGKKTFPLGKN-FTCTESERHMNL------------------------T 244
Query: 289 CAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNN 348
C+ P+CP C C IVDC K L ++P LP TT+L +S +R+ + +S N
Sbjct: 245 CSYIPACPQKCTCIGTIVDCSRKKLTEIPHHLPMETTDL--RISGNRISSIKSFSL--RN 300
Query: 349 FKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
K+ L N I ++ P+AF + L ++ L N + LP K F LR +
Sbjct: 301 LKKLAKID--LSTNLIEDIHPEAFKHTPSLEQLLLFNNKLKHLPTKVFNGLFDLRDL 355
>gi|268581707|ref|XP_002645837.1| C. briggsae CBR-SLT-1 protein [Caenorhabditis briggsae]
Length = 1312
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 120/411 (29%), Positives = 187/411 (45%), Gaps = 57/411 (13%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLN N LT + A R R L + N + CDC L W+ +WL++ + T C P
Sbjct: 120 TLNGNRLTTFEEPSNA---RFRQLDLFNNPWNCDCRLRWMKKWLEKTEGVN-KTVCATPM 175
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGE-CAAEPSCPHPCRCADGIVDCREKGLNKVPILL 122
+++G +I ++ + CSG ++ + C CP PC C VDCR+ GL VP L
Sbjct: 176 NLQGSSIKNLQDEFMTCSGNRKRRYKKTCENAEICPLPCSCTGTTVDCRDSGLTYVPTNL 235
Query: 123 PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQG------------ 170
P ATTE+ L +N ITE+ PKAF + L + L N I+++ D F+G
Sbjct: 236 PPATTEMDLSKNIITEIMPKAFYGLQNLHTLVLYGNNITELKPDTFEGLGSLQLLLLNAN 295
Query: 171 ------------LKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLH 218
+ L L+L +NN+ + + F L L TL +++N ICDC+L WL
Sbjct: 296 QLTCIRRGTFDHVPKLNMLSLYDNNIRSISEITFRNLTSLGTLHLAKNPLICDCNLQWLA 355
Query: 219 RWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYN 278
+ + +C P ++ + +P ++FKC GS
Sbjct: 356 QLNLQKNIETSGARCEQPKRLRKKKFATLPPNKFKCKGSEAF------------------ 397
Query: 279 SCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDK 338
+ K + C + CP C C VDC ++GL P +P+ T L ++S + +
Sbjct: 398 ---ITKFSDSCFIDSICPTQCDCYGTTVDCNKRGLTTTPADIPQFATHL--LLSGNNIST 452
Query: 339 VLLYSYISNNFKRWTNRS-RRLEQNDITELPPKAFANYKRLRRIRLEQNDI 388
V L S+N TN L N +T + K+F ++LR +RL +N +
Sbjct: 453 VDL----SSNTHVLTNLELLDLSSNQVTYINDKSFEKLEKLRELRLNENKL 499
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 116/450 (25%), Positives = 188/450 (41%), Gaps = 81/450 (18%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +NN+ + + F L L TL +++N ICDC+L WL + + +C P
Sbjct: 315 SLYDNNIRSISEITFRNLTSLGTLHLAKNPLICDCNLQWLAQLNLQKNIETSGARCEQPK 374
Query: 64 HIKGQNILDIPEHEFKCSGP---VEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
++ + +P ++FKC G + K + C + CP C C VDC ++GL P
Sbjct: 375 RLRKKKFATLPPNKFKCKGSEAFITKFSDSCFIDSICPTQCDCYGTTVDCNKRGLTTTPA 434
Query: 121 LLPEATTELRLEQNDITELPPKAFANY-KRLRRIDLSKNQISKVAVDAFQGLKSLTSLTL 179
+P+ T L L N+I+ + + + L +DLS NQ++ + +F+ L+ L L L
Sbjct: 435 DIPQFATHLLLSGNNISTVDLSSNTHVLTNLELLDLSSNQVTYINDKSFEKLEKLRELRL 494
Query: 180 NNNNLTYLPDGV-------------------FAELF-----RLRTLRISENSFICDCHLS 215
N N L + V F+ +F +++ +R+ N +CDC +
Sbjct: 495 NENKLHHFSSSVLDEKSNLEVLDLSDNNIQCFSSVFFDKAPKIKEIRVLGNDLLCDCRIL 554
Query: 216 WLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPE-HEFKCSGSSMETRSKIYREECSTDF 274
L WL+ SH +DIP +F+ S ++ +++C+
Sbjct: 555 PLMFWLRS-----------NTSH-----TIDIPPCQQFQHSTDELD------KQKCAG-- 590
Query: 275 HPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTE-------- 326
+P +C + CP C C DG+V C K L P +P TTE
Sbjct: 591 YPEETCSDDSNL--------CPPKCSCLDGVVRCSNKNLTSFPTRIPYDTTELYLDANYI 642
Query: 327 ----------LTYMVSIDRVDKVLLYSYISNNFKRWTNRSRR-LEQNDITELPPKAFANY 375
L Y+ +D L+ S +N F T S + N + L P AF
Sbjct: 643 NEIPIHDLNRLYYLTKLDLSHNRLI-SLENNTFSNLTRLSTLIISYNKLRCLQPLAFNGL 701
Query: 376 KRLRRIRLEQNDITELPPKAFANYKRLRRM 405
LR + L NDI+ LP AF N + +
Sbjct: 702 NSLRILSLHGNDISFLPESAFINLTSITHI 731
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 130/276 (47%), Gaps = 35/276 (12%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++NN+ F + +++ +R+ N +CDC + L WL+ + P
Sbjct: 518 LSDNNIQCFSSVFFDKAPKIKEIRVLGNDLLCDCRILPLMFWLRSNTSHTIDI----PPC 573
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPS-CPHPCRCADGIVDCREKGLNKVPILLP 123
+ Q+ D + + KC+G P C+ + + CP C C DG+V C K L P +P
Sbjct: 574 QQFQHSTDELDKQ-KCAG---YPEETCSDDSNLCPPKCSCLDGVVRCSNKNLTSFPTRIP 629
Query: 124 EATTELRLEQNDITELP------------------------PKAFANYKRLRRIDLSKNQ 159
TTEL L+ N I E+P F+N RL + +S N+
Sbjct: 630 YDTTELYLDANYINEIPIHDLNRLYYLTKLDLSHNRLISLENNTFSNLTRLSTLIISYNK 689
Query: 160 ISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
+ + AF GL SL L+L+ N++++LP+ F L + + + NS CDC+++W +
Sbjct: 690 LRCLQPLAFNGLNSLRILSLHGNDISFLPESAFINLTSITHIAVGSNSLYCDCNMAWFSK 749
Query: 220 WLK-RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
W+K ++ G+ +C P+ + Q +L ++F C
Sbjct: 750 WIKSKFIEAGI-ARCEYPAKLNNQLLLTAQYYQFTC 784
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 133/332 (40%), Gaps = 97/332 (29%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTEL-------------------------- 129
+CP C C D V C +GL +VP +P T L
Sbjct: 16 TCPTDCLCIDRSVSCIGQGLTEVPKGIPNDTVRLLTTYGQSASCDSQSSIIFSSFSSKTP 75
Query: 130 -----RLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL 184
RL +N I +LP F + +L + L N IS A SL LTLN N L
Sbjct: 76 IDFCRRLNRNRIRQLPDFIFQHNVKLTHL-LESNVISSWA--------SLEVLTLNGNRL 126
Query: 185 TYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNI 244
T + A R R L + N + CDC L W+ +WL++ + T C P +++G +I
Sbjct: 127 TTFEEPSNA---RFRQLDLFNNPWNCDCRLRWMKKWLEKTEGVN-KTVCATPMNLQGSSI 182
Query: 245 LDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADG 304
++ + CSG+ R + Y++ C AE CP PC C
Sbjct: 183 KNLQDEFMTCSGN----RKRRYKKTCEN------------------AEI-CPLPCSCTGT 219
Query: 305 IVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDI 364
VDCR+ GL VP LP ATTE+ L +N I
Sbjct: 220 TVDCRDSGLTYVPTNLPPATTEM------------------------------DLSKNII 249
Query: 365 TELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
TE+ PKAF + L + L N+ITEL P F
Sbjct: 250 TEIMPKAFYGLQNLHTLVLYGNNITELKPDTF 281
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTKCFAP 62
+L+ N++++LP+ F L + + + NS CDC+++W +W+K ++ G+ +C P
Sbjct: 708 SLHGNDISFLPESAFINLTSITHIAVGSNSLYCDCNMAWFSKWIKSKFIEAGI-ARCEYP 766
Query: 63 SHIKGQNILDIPEHEFKCSGPV 84
+ + Q +L ++F C V
Sbjct: 767 AKLNNQLLLTAQYYQFTCDTAV 788
>gi|444725687|gb|ELW66247.1| Slit like protein 3 protein [Tupaia chinensis]
Length = 1296
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 130/253 (51%), Gaps = 3/253 (1%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CHL+WL +WL++ + +C P
Sbjct: 434 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPF 493
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C + +V C KGL +P +P
Sbjct: 494 FLKEIPIQDVAIQDFTCDGNEES---SCQLGPRCPEQCTCVETVVRCSNKGLRALPRGVP 550
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TEL L N I L F+N L + LS N++ + V AF GL+SL LTL+ N+
Sbjct: 551 KDVTELDLSNNSIGVLTNYTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGND 610
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
++ LP+G F +L L L + N CDC L WL W+K + +C +P + +
Sbjct: 611 ISSLPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSSPEPMADRL 670
Query: 244 ILDIPEHEFKCSG 256
+L P H F+C G
Sbjct: 671 LLTTPTHRFQCRG 683
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 150/367 (40%), Gaps = 82/367 (22%)
Query: 88 TGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKA-FAN 146
+ EC + CP CRC IVDC + L ++P LPE T+LRL N+I L F
Sbjct: 295 SSECFMDLVCPEKCRCEGTIVDCSNQKLARIPSHLPEYVTDLRLNDNEIAVLEATGIFKK 354
Query: 147 YKRLRRIDLSKNQISKV---AVDA---------------------FQGLKSLTS------ 176
LR+I+LS N+I +V D F+GL L +
Sbjct: 355 LPNLRKINLSNNRIKEVREGTFDGAASVQELMLTGNQLETVHGRMFRGLSGLKTLMLRSN 414
Query: 177 ------------------LTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLH 218
L+L +N +T + G F L L T+ + N F C+CHL+WL
Sbjct: 415 LISCVGNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLG 474
Query: 219 RWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYN 278
+WL++ + +C P +K I D+ +F C G+ EE S
Sbjct: 475 KWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCDGN----------EESS------- 517
Query: 279 SCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDK 338
C P CP C C + +V C KGL +P +P+ TEL +
Sbjct: 518 ----------CQLGPRCPEQCTCVETVVRCSNKGLRALPRGVPKDVTEL----DLSNNSI 563
Query: 339 VLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFAN 398
+L +Y +N + + L N + +P AF + LR + L NDI+ LP +F +
Sbjct: 564 GVLTNYTFSNMSHLS--TLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSLPEGSFND 621
Query: 399 YKRLRRM 405
L +
Sbjct: 622 LTSLSHL 628
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 138/316 (43%), Gaps = 49/316 (15%)
Query: 131 LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDG 190
L +N I LP KAF ++ + L+ N+I+ + V+ FQ L+SLT L+L +N L + G
Sbjct: 102 LSENQIQGLPRKAFRGIADVKNLLLNANKINCLRVNTFQDLQSLTLLSLYDNKLQTISKG 161
Query: 191 VFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEH 250
+F L ++TL +++N F+CDCHL WL +L+ P +C +P + + I I
Sbjct: 162 LFTPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSK 221
Query: 251 EFKCSGSSMETRSKIYREECSTDFHPYNSCPVE--------------------------- 283
+F+CSGS + RS++ EC D C E
Sbjct: 222 KFRCSGSE-DYRSRV-SSECFMDLVCPEKCRCEGTIVDCSNQKLARIPSHLPEYVTDLAL 279
Query: 284 -------------KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYM 330
+ + EC + CP CRC IVDC + L ++P LPE T+L
Sbjct: 280 RKAGHRGSEDYRSRVSSECFMDLVCPEKCRCEGTIVDCSNQKLARIPSHLPEYVTDLRLN 339
Query: 331 VSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDIT 389
D VL + I FK+ N R L N I E+ F ++ + L N +
Sbjct: 340 ---DNEIAVLEATGI---FKKLPNLRKINLSNNRIKEVREGTFDGAASVQELMLTGNQLE 393
Query: 390 ELPPKAFANYKRLRRM 405
+ + F L+ +
Sbjct: 394 TVHGRMFRGLSGLKTL 409
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 109/221 (49%), Gaps = 21/221 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+F L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 149 SLYDNKLQTISKGLFTPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 208
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + + + EC + CP CRC IVDC + L ++P
Sbjct: 209 RLANKRISQIKSKKFRCSGSEDYRSRVSSECFMDLVCPEKCRCEGTIVDCSNQKLARIPS 268
Query: 121 LLPEATTELRL-------EQNDITELPPKAFANYKRLRR-------IDLSKNQISKVAVD 166
LPE T+L L ++ + + + F + + +D S +++++
Sbjct: 269 HLPEYVTDLALRKAGHRGSEDYRSRVSSECFMDLVCPEKCRCEGTIVDCSNQKLARIPSH 328
Query: 167 AFQGLKSLTSLTLNNNNLTYL-PDGVFAELFRLRTLRISEN 206
+ +T L LN+N + L G+F +L LR + +S N
Sbjct: 329 LPE---YVTDLRLNDNEIAVLEATGIFKKLPNLRKINLSNN 366
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TL+ N+++ LP+G F +L L L + N CDC L WL W+K + +C +P
Sbjct: 605 TLHGNDISSLPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSSPE 664
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ + +L P H F+C GPV+
Sbjct: 665 PMADRLLLTTPTHRFQCRGPVD 686
>gi|170589045|ref|XP_001899284.1| EGF-like domain containing protein [Brugia malayi]
gi|158593497|gb|EDP32092.1| EGF-like domain containing protein [Brugia malayi]
Length = 1255
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 120/449 (26%), Positives = 196/449 (43%), Gaps = 83/449 (18%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TL+ NNL+ + G + LR LR++EN ++CDC L W+ + + L T C P+
Sbjct: 27 TLSGNNLSTM--GQLGPMPNLRILRLAENPWLCDCRLRWMKKIISNSHLLARNTLCHRPA 84
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H+ + + +I E KCSG ++ C CP C C + +DCR++GL +P LP
Sbjct: 85 HLNSRMLENINETLMKCSGIEKRAATSCRDASVCPSVCTCTETTIDCRDRGLTHIPANLP 144
Query: 124 EATTELRLEQNDIT------------------------ELPPKAFANYKRLRRIDLSKNQ 159
TTELRLEQN IT + P+AF K L + L N
Sbjct: 145 STTTELRLEQNQITYVPPRAFHNLHQLKRLDLSKNNIGNIGPRAFDGLKSLNSLVLYGNN 204
Query: 160 ISKVAVDAFQGLKSLTSLTLN------------------------NNNLTYLPDGVFAEL 195
IS + +AF GL +L L LN +N + + +G F L
Sbjct: 205 ISNLPSEAFHGLSNLQLLLLNANKLQCLRRDTFSNLTNLNLLSLYDNQIHSIANGTFDGL 264
Query: 196 FRLRTLRISENSFICDCHLSWLH--RWLKR-YPRLGLYT---KCFAPSHIKGQNILDIPE 249
L TL ++ N ICDC+L+++H WL + + T +C +P + + I +
Sbjct: 265 INLTTLHLARNPIICDCNLNFVHYQEWLAHLLAKKAIETSSARCDSPKRVAHRRISTLHH 324
Query: 250 HEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCR 309
+F+C GS + G C + CP C C + VDC
Sbjct: 325 SKFRCKGSEAY---------------------ITANAGRCIIDHPCPVGCLCLNTFVDCS 363
Query: 310 EKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPP 369
+G P +P TTEL +S +++ + L + + +F+ T + L+ N+I +
Sbjct: 364 NQGWTDFPRKIPRYTTEL--RMSNNKIVAIRLSTNL--HFENLT--TLLLDGNEIEFIDS 417
Query: 370 KAFANYKRLRRIRLEQNDITELPPKAFAN 398
+ + +++ + L +N + P+ F +
Sbjct: 418 DSLSALGKIQELDLSRNKLQHFSPRVFGS 446
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 180/428 (42%), Gaps = 56/428 (13%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLH--RWLKRY-PRLGLYT---KCF 60
+N + + +G F L L TL ++ N ICDC+L+++H WL + + T +C
Sbjct: 250 DNQIHSIANGTFDGLINLTTLHLARNPIICDCNLNFVHYQEWLAHLLAKKAIETSSARCD 309
Query: 61 APSHIKGQNILDIPEHEFKCSGP---VEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 117
+P + + I + +F+C G + G C + CP C C + VDC +G
Sbjct: 310 SPKRVAHRRISTLHHSKFRCKGSEAYITANAGRCIIDHPCPVGCLCLNTFVDCSNQGWTD 369
Query: 118 VPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSL 177
P +P TTELR+ N I + +++ L + L N+I + D+ L + L
Sbjct: 370 FPRKIPRYTTELRMSNNKIVAIRLSTNLHFENLTTLLLDGNEIEFIDSDSLSALGKIQEL 429
Query: 178 TLNNNNLTYLPDGVFAEL-FRLRTLRISENSFICDCHL-SWLHRWLKRYPRLGLYTKCFA 235
L+ N L + VF ++ L + N FIC+CH+ +++ L C
Sbjct: 430 DLSRNKLQHFSPRVFGSGNLQITKLSLDGNDFICNCHIVDFVYDLRMNGSHLLNSAVCHE 489
Query: 236 PSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSC 295
P ++G+ + + E C +++ + C+ D + C
Sbjct: 490 PLQLRGRTMASLTRDELFC--------TEVTEDTCAED------------------DNYC 523
Query: 296 PHPCRCADGIVDCREKGLNKVPILLPEATTE-----------------LTYMVSIDRVDK 338
P C+C + +V C K L K P+ +P TTE L ++V +D +
Sbjct: 524 PADCKCHETVVRCSNKNLKKFPVGIPAKTTELLLDSNDIVYIPPELNKLKHLVKLD-LSH 582
Query: 339 VLLYSYISNNFKRWTNRSRR-LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFA 397
+ S + F T S L N + L +AF + LR + L NDI+ LP AFA
Sbjct: 583 NRIVSIENEAFANLTKLSTLILSYNKLECLGEEAFTHLTSLRILSLHGNDISVLPESAFA 642
Query: 398 NYKRLRRM 405
N + +
Sbjct: 643 NLHNITHI 650
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 130/276 (47%), Gaps = 27/276 (9%)
Query: 5 LNNNNLTYLPDGVFAEL-FRLRTLRISENSFICDCHL-SWLHRWLKRYPRLGLYTKCFAP 62
L+ N L + VF ++ L + N FIC+CH+ +++ L C P
Sbjct: 431 LSRNKLQHFSPRVFGSGNLQITKLSLDGNDFICNCHIVDFVYDLRMNGSHLLNSAVCHEP 490
Query: 63 SHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILL 122
++G+ + + E C+ E E + CP C+C + +V C K L K P+ +
Sbjct: 491 LQLRGRTMASLTRDELFCTEVTEDTCAE--DDNYCPADCKCHETVVRCSNKNLKKFPVGI 548
Query: 123 PEATTELRLEQNDITELPPK-----------------------AFANYKRLRRIDLSKNQ 159
P TTEL L+ NDI +PP+ AFAN +L + LS N+
Sbjct: 549 PAKTTELLLDSNDIVYIPPELNKLKHLVKLDLSHNRIVSIENEAFANLTKLSTLILSYNK 608
Query: 160 ISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
+ + +AF L SL L+L+ N+++ LP+ FA L + + + NS CDC ++W R
Sbjct: 609 LECLGEEAFTHLTSLRILSLHGNDISVLPESAFANLHNITHIALGSNSLYCDCRIAWFSR 668
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
W+KR +C P +++ Q +L E +FKC+
Sbjct: 669 WIKRRFIEAGIARCELPLNLRNQLLLSANELQFKCT 704
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 103/229 (44%), Gaps = 56/229 (24%)
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAP 236
LTL+ NNL+ + G + LR LR++EN ++CDC L W+ + + L T C P
Sbjct: 26 LTLSGNNLSTM--GQLGPMPNLRILRLAENPWLCDCRLRWMKKIISNSHLLARNTLCHRP 83
Query: 237 SHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCP 296
+H+ + + +I E KCSG +E R+ C CP
Sbjct: 84 AHLNSRMLENINETLMKCSG--IEKRAAT----------------------SCRDASVCP 119
Query: 297 HPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRS 356
C C + +DCR++GL +P LP TTEL
Sbjct: 120 SVCTCTETTIDCRDRGLTHIPANLPSTTTEL----------------------------- 150
Query: 357 RRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN IT +PP+AF N +L+R+ L +N+I + P+AF K L +
Sbjct: 151 -RLEQNQITYVPPRAFHNLHQLKRLDLSKNNIGNIGPRAFDGLKSLNSL 198
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L+ N+++ LP+ FA L + + + NS CDC ++W RW+KR +C P
Sbjct: 627 SLHGNDISVLPESAFANLHNITHIALGSNSLYCDCRIAWFSRWIKRRFIEAGIARCELPL 686
Query: 64 HIKGQNILDIPEHEFKCSGPV 84
+++ Q +L E +FKC+ V
Sbjct: 687 NLRNQLLLSANELQFKCTEKV 707
>gi|297676599|ref|XP_002816216.1| PREDICTED: slit homolog 3 protein-like, partial [Pongo abelii]
Length = 533
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 173/427 (40%), Gaps = 101/427 (23%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 131 SLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 190
Query: 64 HIKGQNILDIPEHEFKCSG----------------------PVEKPTGECAA---EPSCP 98
+ + I I +F+CS P G A+ + CP
Sbjct: 191 RLANKRISQIKSKKFRCSARCQWSFIAVCLACXSFDYLLGAPRITAAGSAASAFMDLVCP 250
Query: 99 HPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSK 157
CRC IVDC + L ++P LPE T+LRL N+I+ L F LR+I+LS
Sbjct: 251 EKCRCEGTIVDCSNQKLARIPSHLPEYVTDLRLNDNEISVLEATGIFKKLPNLRKINLSN 310
Query: 158 NQISKV---AVDA---------------------FQGLKSLTS----------------- 176
N+I +V A D F+GL L +
Sbjct: 311 NKIKEVREGAFDGAAGVQELMLTGNQLETVHGRMFRGLSGLKTLMLRSNLISCVSNDTFA 370
Query: 177 -------LTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGL 229
L+L +N +T + G F L L T+ + N F C+CHL+WL +WL++ +
Sbjct: 371 GLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSG 430
Query: 230 YTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGEC 289
+C P +K I D+ +F C G+ + C
Sbjct: 431 NPRCQKPFFLKEIPIQDVAIQDFTCDGNDESS---------------------------C 463
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNF 349
P CP C C + +V C KGL +P +P+ TEL Y+ + L + F
Sbjct: 464 QLSPRCPEQCTCMETVVRCSNKGLRALPKGMPKDVTELPYLNGSQQDGSGALTKMAAMGF 523
Query: 350 KRWTNRS 356
+ T +
Sbjct: 524 DKGTGNT 530
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 120/255 (47%), Gaps = 12/255 (4%)
Query: 155 LSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHL 214
L+ N+I+ + V+ FQ L++L L+L +N L + G+FA L ++TL +++N F+CDCHL
Sbjct: 108 LNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHL 167
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDF 274
WL +L+ P +C +P + + I I +F+CS + + S D+
Sbjct: 168 KWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCSARCQWSFIAVCLACXSFDY 227
Query: 275 HPYNSCPVEKPTGECAA---EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV 331
P G A+ + CP CRC IVDC + L ++P LPE T+L
Sbjct: 228 --LLGAPRITAAGSAASAFMDLVCPEKCRCEGTIVDCSNQKLARIPSHLPEYVTDLRLN- 284
Query: 332 SIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITE 390
D VL + I FK+ N R L N I E+ AF ++ + L N +
Sbjct: 285 --DNEISVLEATGI---FKKLPNLRKINLSNNKIKEVREGAFDGAAGVQELMLTGNQLET 339
Query: 391 LPPKAFANYKRLRRM 405
+ + F L+ +
Sbjct: 340 VHGRMFRGLSGLKTL 354
>gi|47207779|emb|CAF91062.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1229
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 130/242 (53%), Gaps = 50/242 (20%)
Query: 53 LGLYTKCFAPSHIKGQNILDIPEHEFKCSGPVEKPTGE-CA-AEPSCPHPCRCADGIVDC 110
LGLY +C +P ++G N+ ++ + + CSG + C+ A SCP C C++ IVDC
Sbjct: 252 LGLYAQCSSPPSLRGLNLAELRKSDLACSGHGGSAFVQPCSLASGSCPPMCTCSNNIVDC 311
Query: 111 REKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQG 170
R +GL +P LPEA TE+RLEQN I +PP AF++YK+LRRIDLS NQI+++A DAFQG
Sbjct: 312 RGRGLTAIPAHLPEAMTEIRLEQNGIKSVPPGAFSSYKKLRRIDLSNNQIAEMAPDAFQG 371
Query: 171 LKSLTSLTLNNNNLTYLPDGVF--------------------AELFR------------- 197
L++L+SL L N + LP GVF A LF+
Sbjct: 372 LRALSSLVLYGNKIAELPAGVFDGLSSLELLLLNANRIHCIRASLFKDLENLALLSLYDN 431
Query: 198 ---------------LRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQ 242
++TL +++N F+CDCH+ WL +L+ P +C +P + +
Sbjct: 432 RIQSLAKGTFGSLRSIQTLHLAQNPFVCDCHVRWLAEFLRANPIETSGARCASPRRLANK 491
Query: 243 NI 244
I
Sbjct: 492 RI 493
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 126/270 (46%), Gaps = 19/270 (7%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L+ + G F L L TL + N F CDC LSW WL+ + +C +P+
Sbjct: 611 SLYDNQLSTILPGAFDTLPNLSTLNLLANPFNCDCRLSWFGAWLRSRRIVTGNPRCQSPA 670
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C + C P CP C C D +V C K L +P LP
Sbjct: 671 FLREIPLQDVAAPDFRCEDGAAQEEAGCGLGPQCPSQCTCMDSVVRCSNKHLQALPRGLP 730
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSL------ 177
TEL L+ N T +P K A ++ L+ +DLS N+IS ++ D+F + LT+L
Sbjct: 731 RNVTELYLDGNQFTSVP-KELATFRFLQLVDLSNNKISFLSDDSFSNMSQLTTLWRAHTH 789
Query: 178 --------TLNNNNLTYLPDGVF---AELFRLRTLRISENSFICDCHLSWLHRWLKRYPR 226
++L+ F + + R + I N CDC L WL W+K +
Sbjct: 790 TQHTHTHTHTQRSDLSSFVQFFFHPCSSIIR-SLVAIGANPLYCDCRLLWLSDWVKSGYK 848
Query: 227 LGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
+C P ++G+ +L P H F+C G
Sbjct: 849 EPGIARCAGPGGVEGKLLLTAPAHSFQCDG 878
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 165/412 (40%), Gaps = 65/412 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N F+CDCH+ WL +L+ P +C +P
Sbjct: 427 SLYDNRIQSLAKGTFGSLRSIQTLHLAQNPFVCDCHVRWLAEFLRANPIETSGARCASPR 486
Query: 64 HIKGQNILDIPEHEFK--CSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPIL 121
+ + I + + C G V P + S G+ ++ L+ I
Sbjct: 487 RLANKRIAQDQKQQVPLFCQGAVPHPRRLNNNDLSVLEATGAFKGLSQLKKINLSNNKIS 546
Query: 122 LPE--------ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKS 173
E + EL L N + + F + LR + L N+IS + +F GL +
Sbjct: 547 EIEDGAFEGAASVVELHLTANHLDAVRGSMFKGMEGLRMLMLRNNKISCLHNGSFTGLNN 606
Query: 174 LTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKC 233
+ L+L +N L+ + G F L L TL + N F CDC LSW WL+ + +C
Sbjct: 607 VRLLSLYDNQLSTILPGAFDTLPNLSTLNLLANPFNCDCRLSWFGAWLRSRRIVTGNPRC 666
Query: 234 FAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEP 293
+P+ ++ + D+ +F+C + + + C P
Sbjct: 667 QSPAFLREIPLQDVAAPDFRCEDGAAQEEAG------------------------CGLGP 702
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
CP C C D +V C K L +P LP TEL
Sbjct: 703 QCPSQCTCMDSVVRCSNKHLQALPRGLPRNVTELY------------------------- 737
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L+ N T + PK A ++ L+ + L N I+ L +F+N +L +
Sbjct: 738 -----LDGNQFTSV-PKELATFRFLQLVDLSNNKISFLSDDSFSNMSQLTTL 783
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 150/397 (37%), Gaps = 139/397 (35%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTEL-------------------------- 129
+CP PC C VDC +G++ VP +P AT L
Sbjct: 34 ACPSPCSCLGATVDCHGRGIHAVPKNIPRATERLLRYSCEDILCFRSRASGAQPVSPLGG 93
Query: 130 ----------RLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTL 179
L N++T + FA + LR + L +NQI V AF LK L L L
Sbjct: 94 CSHPGGQAGSDLNGNNLTVISRTDFAGLRHLRVLHLMENQIVAVERGAFDELKELERLRL 153
Query: 180 NNNNLTYLPDGVFAE---LFRL------------RTLR-ISENSFICDCHLS--WLHRW- 220
N N L +P+ +F + L RL RT R +E +C LHR
Sbjct: 154 NRNRLGQIPELLFQKNEALTRLDLSENVLQAIPRRTFRGATELKNLCSAGQKPHQLHRGG 213
Query: 221 -----------------------LKRYPR---------LGLYTKCFAPSHIKGQNILDIP 248
L+ P LGLY +C +P ++G N+ ++
Sbjct: 214 SLPGPAHPGSPNAEQQQHQQHSRLQLQPHAQAAHLRASLGLYAQCSSPPSLRGLNLAELR 273
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ + CSG + + CS A SCP C C++ IVDC
Sbjct: 274 KSDLACSGHG----GSAFVQPCSL------------------ASGSCPPMCTCSNNIVDC 311
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
R +GL +P LPEA TE+ RLEQN I +P
Sbjct: 312 RGRGLTAIPAHLPEAMTEI------------------------------RLEQNGIKSVP 341
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
P AF++YK+LRRI L N I E+ P AF + L +
Sbjct: 342 PGAFSSYKKLRRIDLSNNQIAEMAPDAFQGLRALSSL 378
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 27 LRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGPVEK 86
+ I N CDC L WL W+K + +C P ++G+ +L P H F+C G E
Sbjct: 823 VAIGANPLYCDCRLLWLSDWVKSGYKEPGIARCAGPGGVEGKLLLTAPAHSFQCDGRREL 882
Query: 87 PTGE 90
G
Sbjct: 883 SGGS 886
>gi|444708220|gb|ELW49312.1| Slit like protein 1 protein [Tupaia chinensis]
Length = 1558
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/451 (25%), Positives = 189/451 (41%), Gaps = 91/451 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + L G F L ++TL +++N FICDC+L WL +L+ P +C +P
Sbjct: 434 SLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPR 493
Query: 64 HIKGQNILDIPEHEFKCSGPVE---------KPTGECAAEPSCPHPCRCADGIVDCREKG 114
+ + I I +F+CS + + EC+++ CPH CRC +V+C
Sbjct: 494 RLANKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECSSDVVCPHKCRCEASVVECSSLK 553
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQG--- 170
L K+P +P++T ELRL N+I+ L F L++I+LS N++S++ F+G
Sbjct: 554 LTKIPERIPQSTAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGTFEGAAS 613
Query: 171 ---------------------LKSLTS------------------------LTLNNNNLT 185
L L + L+L +N ++
Sbjct: 614 VSELHLTANQLESIRSGMFRGLDGLRTLMLRTNRIGCIHNDSFTGLRNVRLLSLYDNQIS 673
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+C L+WL WL++ + +C P ++ +
Sbjct: 674 AIAPGAFDTLQSLSTLNLLANPFNCNCQLAWLGHWLRKRRIVTGNPRCHNPDFLRQIPLQ 733
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C E+ C P CP C C D +
Sbjct: 734 DVAFPDFRCEEGQEES--------------------------SCLPRPQCPQECACLDTV 767
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
V C K L +P +P+ TEL +D L+ +S FK + L N I+
Sbjct: 768 VRCSNKHLRALPKGIPKNVTELY----LDGNQFTLVPGQLS-TFKYL--QLVDLSNNRIS 820
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L +F N +L + L N + +PP AF
Sbjct: 821 SLSNSSFTNMSQLTTLILSYNALQCIPPLAF 851
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 151/326 (46%), Gaps = 38/326 (11%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N ++ + G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 666 SLYDNQISAIAPGAFDTLQSLSTLNLLANPFNCNCQLAWLGHWLRKRRIVTGNPRCHNPD 725
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ + C P CP C C D +V C K L +P +P
Sbjct: 726 FLRQIPLQDVAFPDFRCEEGQEESS--CLPRPQCPQECACLDTVVRCSNKHLRALPKGIP 783
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ TEL L+ N T L P + +K L+ +DLS N+IS ++ +F + LT+L L+ N
Sbjct: 784 KNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNRISSLSNSSFTNMSQLTTLILSYNA 842
Query: 184 LTYLP------------------------DGVFAELFRLRTLRISENSFICDCHLSWLHR 219
L +P +GVFA++ L L I N CDCHL WL
Sbjct: 843 LQCIPPLAFQGLHSLRLLSLHGNDVSTLQEGVFADVTSLSHLAIGANPLYCDCHLRWLSS 902
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG-SSMETRSKIYREECSTDFHPYN 278
W+K + +C P ++G+ +L P +F+C G S+ ++K P
Sbjct: 903 WVKTGYKEPGIARCAGPPDMEGKLLLTTPAKKFECHGPPSLAVQAKC---------DPCL 953
Query: 279 SCPVEKPTGECAAEPSCPHPCRCADG 304
S P + G C +P + C C G
Sbjct: 954 SSPCQN-QGTCLHDPLEGYKCACPSG 978
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 135/282 (47%), Gaps = 22/282 (7%)
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL 184
A + L N IT+LP F L+ + L+ N+I+ + DAFQ L++L+ L+L +N +
Sbjct: 381 AGSSWVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKI 440
Query: 185 TYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNI 244
L G F L ++TL +++N FICDC+L WL +L+ P +C +P + + I
Sbjct: 441 QSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANKRI 500
Query: 245 LDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADG 304
I +F+CS Y + D+ NS EC+++ CPH CRC
Sbjct: 501 GQIKSKKFRCSAKEQ------YFIPGTEDYQ-LNS--------ECSSDVVCPHKCRCEAS 545
Query: 305 IVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQND 363
+V+C L K+P +P++T EL ++ + +L + + FK+ T+ + L N
Sbjct: 546 VVECSSLKLTKIPERIPQSTAEL----RLNNNEISILEA--TGMFKKLTHLKKINLSNNK 599
Query: 364 ITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++E+ F + + L N + + F LR +
Sbjct: 600 VSEIEDGTFEGAASVSELHLTANQLESIRSGMFRGLDGLRTL 641
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 58/101 (57%), Gaps = 24/101 (23%)
Query: 102 RCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELP--------------------- 140
R +GIVDCR KGL +P LPE TE+RLE N I +P
Sbjct: 231 RTFNGIVDCRGKGLTAIPANLPETMTEIRLELNGIKSVPPGAFSPYRKLRRIRLELNGVK 290
Query: 141 ---PKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLT 178
P AF+ Y++LRRIDLS NQI+++A DAFQGL+SL SL
Sbjct: 291 SGAPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLV 331
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 54/107 (50%), Gaps = 8/107 (7%)
Query: 300 RCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-R 358
R +GIVDCR KGL +P LPE TE+ R++ + S F + R R
Sbjct: 231 RTFNGIVDCRGKGLTAIPANLPETMTEI-------RLELNGIKSVPPGAFSPYRKLRRIR 283
Query: 359 LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
LE N + P AF+ Y++LRRI L N I E+ P AF + L +
Sbjct: 284 LELNGVKSGAPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSL 330
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 41/71 (57%)
Query: 131 LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDG 190
L +N I +P KAF L+ + L KN IS + AF+ L+ L LTLNNNN++ +P
Sbjct: 163 LSENAIQAIPRKAFRGATDLKNLQLDKNHISCIEEGAFRALRGLEVLTLNNNNISAIPVS 222
Query: 191 VFAELFRLRTL 201
F + +LRT
Sbjct: 223 SFNHMPKLRTF 233
>gi|380805387|gb|AFE74569.1| slit homolog 3 protein precursor, partial [Macaca mulatta]
Length = 665
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 134/277 (48%), Gaps = 28/277 (10%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CHL+WL +WL++ + +C P
Sbjct: 14 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPF 73
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C + +V C KGL +P +P
Sbjct: 74 FLKEIPIQDVAIQDFTCDGNDES---SCQLSPRCPEQCTCVETVVRCSNKGLRALPKGMP 130
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISK--------------------- 162
+ TEL LE N +T +P + + + L IDLS N IS
Sbjct: 131 KDVTELYLEGNHLTAVP-RELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNR 189
Query: 163 ---VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
+ + AF GL+SL LTL+ N+++ +P+G F +L L L + N CDC L WL
Sbjct: 190 LRCIPIHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSE 249
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C +P + + +L P H F+C G
Sbjct: 250 WVKAGYKEPGIARCSSPEPMADRLLLTTPTHRFQCKG 286
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 108/257 (42%), Gaps = 44/257 (17%)
Query: 166 DAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP 225
D F GL S+ L+L +N +T + G F L L T+ + N F C+CHL+WL +WL++
Sbjct: 2 DTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRR 61
Query: 226 RLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKP 285
+ +C P +K I D+ +F C G+ +
Sbjct: 62 IVSGNPRCQKPFFLKEIPIQDVAIQDFTCDGNDESS------------------------ 97
Query: 286 TGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL----TYMVSIDRVDKVL- 340
C P CP C C + +V C KGL +P +P+ TEL ++ ++ R L
Sbjct: 98 ---CQLSPRCPEQCTCVETVVRCSNKGLRALPKGMPKDVTELYLEGNHLTAVPRELSALR 154
Query: 341 ---LYSYISNNFKRWTNRSRR---------LEQNDITELPPKAFANYKRLRRIRLEQNDI 388
L +N+ TN + L N + +P AF + LR + L NDI
Sbjct: 155 HLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCIPIHAFNGLRSLRVLTLHGNDI 214
Query: 389 TELPPKAFANYKRLRRM 405
+ +P +F + L +
Sbjct: 215 SSVPEGSFNDLTSLSHL 231
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TL+ N+++ +P+G F +L L L + N CDC L WL W+K + +C +P
Sbjct: 208 TLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSSPE 267
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ + +L P H F+C GPV+
Sbjct: 268 PMADRLLLTTPTHRFQCKGPVD 289
>gi|308072154|dbj|BAJ22066.1| slit [Dugesia japonica]
Length = 1382
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 125/455 (27%), Positives = 197/455 (43%), Gaps = 63/455 (13%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N LT L F L +LR L I N CDC L+W+ ++K C P +
Sbjct: 397 LSENKLTTLKRETFNPLIKLRFLYIVNNPLNCDCRLAWIVDYIKGKENNEPIASCHYPRN 456
Query: 65 IKGQNILDIPEHEFKCSGPV----EKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
++G + + + F+CS E EC + SCP C C IV+C GL+ +P
Sbjct: 457 MQGLALRSLQTYSFQCSNEFDSKYETHNEECVPKVSCPLKCTCTSDIVNCSNTGLSSLPS 516
Query: 121 LLPEATTELRLEQNDITELPP-KAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTL 179
+ +T L + N++ +L P + L ++DLS NQI K+ D F LT + L
Sbjct: 517 SIFPSTKTLIMSHNNLNKLTPIYSVHEAPNLMKLDLSFNQIEKLDADVFSRSTKLTKIHL 576
Query: 180 NNNNLTYLPDGVFAELFRLRTLRISENS------------------------FICDCHLS 215
N+N L + + F L LRTL++S+N F C+C++
Sbjct: 577 NSNKLKCINNETFKNLIDLRTLQLSDNEINCVVVDSFKNNLNLKYLMLNKNPFHCNCNMK 636
Query: 216 WLHRWLKRYPR-LGLYT--KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECST 272
W W + + LG + C +P +KG + + E F C G++ +S E C+
Sbjct: 637 WTSDWSRNHHSILGDHRLPTCQSPGLLKGTPLTHLDEKYFLCDGNASIDQS---FESCNE 693
Query: 273 DFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS 332
C + + EC CP C+C VDC + L ++P +P+ TTEL
Sbjct: 694 ISSTEACCSI--GSDECKQIKKCPSKCKCEITKVDCSDMQLKEIPHEIPQDTTELY---- 747
Query: 333 IDRVD-----------------KVLLYSYISNNFKRWTNRSRRLEQ-----NDITELPPK 370
+DR D VL Y+ I+ K + LE N + +
Sbjct: 748 LDRNDLKTLNETSFKNLVFLKTLVLSYNGITELNKNVLTPLKNLETLVLSFNKLQCIHQD 807
Query: 371 AFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
AF + K L+ + L+ ND++ +P +AF + K L +
Sbjct: 808 AFKDLKNLKVLILQSNDVSTIPFQAFNDLKNLNNI 842
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 110/458 (24%), Positives = 189/458 (41%), Gaps = 85/458 (18%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGL----YTKCF 60
L N + ++ + + ++L L+ LRI +N C+CHL+WL+ ++K P + C
Sbjct: 169 LEGNKIFWISESI-SKLKNLKELRIKKNKLTCNCHLAWLNWFMKHRPDIFKPDVPSVVCS 227
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPS---CPHPCRCA-DGIVDCREKGLN 116
AP + + + +EF+C+ +K E + + C C C+ DGIV C K L+
Sbjct: 228 APFRLSDIPVYTLSPYEFQCASE-DKTNLENICQQNKKVCSKQCNCSNDGIVKCVGKQLS 286
Query: 117 KVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLS-------------------- 156
+P LP EL L N+IT L + YK L++I+L+
Sbjct: 287 NIPQDLPVNVVELDLSDNNITILQQGYLSKYKTLKKINLTGNGMVDIEPGAFLGLQQLTS 346
Query: 157 ----KNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFI--- 209
N++ + +AF GL SL L L+ N + LP F + +L L +SEN
Sbjct: 347 LYLNANKLKTIRKNAFSGLSSLMFLFLHGNEIECLPADAFEGVKKLHILHLSENKLTTLK 406
Query: 210 ---------------------CDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
CDC L+W+ ++K C P +++G + +
Sbjct: 407 RETFNPLIKLRFLYIVNNPLNCDCRLAWIVDYIKGKENNEPIASCHYPRNMQGLALRSLQ 466
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ F+CS + +++ + + E EC + SCP C C IV+C
Sbjct: 467 TYSFQCS-NEFDSKYETHNE-------------------ECVPKVSCPLKCTCTSDIVNC 506
Query: 309 REKGLNKVP-ILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITEL 367
GL+ +P + P T + +++++ + N K L N I +L
Sbjct: 507 SNTGLSSLPSSIFPSTKTLIMSHNNLNKLTPIYSVHEAPNLMK------LDLSFNQIEKL 560
Query: 368 PPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F+ +L +I L N + + + F N LR +
Sbjct: 561 DADVFSRSTKLTKIHLNSNKLKCINNETFKNLIDLRTL 598
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 142/359 (39%), Gaps = 80/359 (22%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP+ C+C + V+C+ + VPI+L E TT L L N I + F L+ + L
Sbjct: 38 TCPNGCQCENYSVECKHRLFPNVPIILQEKTTRLNLLGNRINVIRKSDFFKLIYLKVLQL 97
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFR------------------ 197
S N+I+ + AF L +L L LN N + YLPDG+F++L +
Sbjct: 98 SNNRITSIEPGAFDNLVNLIKLRLNRNLIHYLPDGLFSKLSKLQKLDLRDNQLQCINENT 157
Query: 198 -----------------------------LRTLRISENSFICDCHLSWLHRWLKRYPRLG 228
L+ LRI +N C+CHL+WL+ ++K P +
Sbjct: 158 FNKLTMLKYLLLEGNKIFWISESISKLKNLKELRIKKNKLTCNCHLAWLNWFMKHRPDIF 217
Query: 229 L----YTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEK 284
C AP + + + +EF+C+ I ++
Sbjct: 218 KPDVPSVVCSAPFRLSDIPVYTLSPYEFQCASEDKTNLENICQQN--------------- 262
Query: 285 PTGECAAEPSCPHPCRCA-DGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYS 343
+ C C C+ DGIV C K L+ +P LP EL D +L
Sbjct: 263 -------KKVCSKQCNCSNDGIVKCVGKQLSNIPQDLPVNVVELDLS---DNNITILQQG 312
Query: 344 YISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
Y+S K T + L N + ++ P AF ++L + L N + + AF+ L
Sbjct: 313 YLS---KYKTLKKINLTGNGMVDIEPGAFLGLQQLTSLYLNANKLKTIRKNAFSGLSSL 368
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 137/298 (45%), Gaps = 48/298 (16%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPR-LGLYT--KCFA 61
L++N + + F L+ L +++N F C+C++ W W + + LG + C +
Sbjct: 600 LSDNEINCVVVDSFKNNLNLKYLMLNKNPFHCNCNMKWTSDWSRNHHSILGDHRLPTCQS 659
Query: 62 PSHIKGQNILDIPEHEFKCSGPVEKP-------------------TGECAAEPSCPHPCR 102
P +KG + + E F C G + EC CP C+
Sbjct: 660 PGLLKGTPLTHLDEKYFLCDGNASIDQSFESCNEISSTEACCSIGSDECKQIKKCPSKCK 719
Query: 103 CADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISK 162
C VDC + L ++P +P+ TTEL L++ND+ L +F N L+ + LS N I++
Sbjct: 720 CEITKVDCSDMQLKEIPHEIPQDTTELYLDRNDLKTLNETSFKNLVFLKTLVLSYNGITE 779
Query: 163 ------------------------VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRL 198
+ DAF+ LK+L L L +N+++ +P F +L L
Sbjct: 780 LNKNVLTPLKNLETLVLSFNKLQCIHQDAFKDLKNLKVLILQSNDVSTIPFQAFNDLKNL 839
Query: 199 RTLRISENSFICDCHLSWLHR-WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
+ + +N F CDC++ WL++ +L+R+ G+ + C +P +K ++I +F CS
Sbjct: 840 NNIALGQNPFHCDCNIKWLNQFFLERFLDNGI-SLCASPEKMKLKSIYHSKPTDFICS 896
>gi|4377995|gb|AAD19336.1| SLIT1 protein, partial [Homo sapiens]
Length = 850
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 134/276 (48%), Gaps = 26/276 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L T+ + N F C+CHL+WL +WL++ + +C P
Sbjct: 62 SLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPF 121
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C G E C P CP C C + +V C KGL +P +P
Sbjct: 122 FLKEIPIQDVAIQDFTCDGNEES---SCQLSPRCPEQCTCMETVVRCSNKGLRALPRGMP 178
Query: 124 EATTELRLEQNDITELPPK-----------------------AFANYKRLRRIDLSKNQI 160
+ TEL LE N +T +P + F+N L + LS N++
Sbjct: 179 KDVTELYLEGNHLTAVPRELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRL 238
Query: 161 SKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW 220
+ V AF GL+SL LTL+ N+++ +P+G F +L L L + N CDC L WL W
Sbjct: 239 RCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEW 298
Query: 221 LKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
+K + +C +P + + +L P H F+C G
Sbjct: 299 VKAGYKEPGIARCSSPEPMADRLLLTTPTHRFQCKG 334
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 127/298 (42%), Gaps = 44/298 (14%)
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL 184
+ EL L N + + + F L+ + L N I V+ D F GL S+ L+L +N +
Sbjct: 9 SVQELMLTGNQLETVHGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRI 68
Query: 185 TYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNI 244
T + G F L L T+ + N F C+CHL+WL +WL++ + +C P +K I
Sbjct: 69 TTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPI 128
Query: 245 LDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADG 304
D+ +F C G+ EE S C P CP C C +
Sbjct: 129 QDVAIQDFTCDGN----------EESS-----------------CQLSPRCPEQCTCMET 161
Query: 305 IVDCREKGLNKVPILLPEATTEL----TYMVSIDRVDKVL----LYSYISNNFKRWTNRS 356
+V C KGL +P +P+ TEL ++ ++ R L L +N+ TN +
Sbjct: 162 VVRCSNKGLRALPRGMPKDVTELYLEGNHLTAVPRELSALRHLTLIDLSNNSISMLTNYT 221
Query: 357 RR---------LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P AF + LR + L NDI+ +P +F + L +
Sbjct: 222 FSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHL 279
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TL+ N+++ +P+G F +L L L + N CDC L WL W+K + +C +P
Sbjct: 256 TLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSSPE 315
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ + +L P H F+C GPV+
Sbjct: 316 PMADRLLLTTPTHRFQCKGPVD 337
>gi|37747560|gb|AAH59267.1| Slit2 protein [Mus musculus]
Length = 945
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 134/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+CHL+WL WL+R + +C P
Sbjct: 52 SLYDNQITTVAPGAFDSLHSLSTLNLLANPFNCNCHLAWLGEWLRRKRIVTGNPRCQKPY 111
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 112 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPSECTCLDTVVRCSNKGLKVLPKGIP 169
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
+ TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 170 KDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 228
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 229 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 288
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 289 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 325
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 128/279 (45%), Gaps = 35/279 (12%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
E+ L N + + K F + L+ + L N+IS V D+F GL S+ L+L +N +T +
Sbjct: 2 EILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLGSVRLLSLYDNQITTV 61
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDI 247
G F L L TL + N F C+CHL+WL WL+R + +C P +K I D+
Sbjct: 62 APGAFDSLHSLSTLNLLANPFNCNCHLAWLGEWLRRKRIVTGNPRCQKPYFLKEIPIQDV 121
Query: 248 PEHEFKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCADGIV 306
+F C D + NSC P+ + CP C C D +V
Sbjct: 122 AIQDFTCD-----------------DGNDDNSCSPLSR----------CPSECTCLDTVV 154
Query: 307 DCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITE 366
C KGL +P +P+ TEL +D L+ +S N+K T L N I+
Sbjct: 155 RCSNKGLKVLPKGIPKDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNNRIST 207
Query: 367 LPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L ++F+N +L + L N + +PP+ F K LR +
Sbjct: 208 LSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 246
>gi|16118490|gb|AAL14447.1| slit-2 [Gallus gallus]
Length = 783
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 134/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+CHL+WL WL++ + +C P
Sbjct: 94 SLYDNQITTVAPGSFDTLHSLSTLNLLANPFNCNCHLAWLGDWLRKKRIVTGNPRCQKPY 153
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 154 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPAECTCLDTVVRCSNKGLKALPKGIP 211
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAF--------------- 168
+ TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 212 KDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 270
Query: 169 ---------QGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 271 LRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 330
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 331 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 367
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 127/282 (45%), Gaps = 35/282 (12%)
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL 184
EL L N + + K F + L+ + L N++S V D+F GL S+ L+L +N +
Sbjct: 41 GVNELLLTSNRLETVRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQI 100
Query: 185 TYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNI 244
T + G F L L TL + N F C+CHL+WL WL++ + +C P +K I
Sbjct: 101 TTVAPGSFDTLHSLSTLNLLANPFNCNCHLAWLGDWLRKKRIVTGNPRCQKPYFLKEIPI 160
Query: 245 LDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCAD 303
D+ +F C D + NSC P+ + CP C C D
Sbjct: 161 QDVAIQDFTCD-----------------DGNDDNSCSPLSR----------CPAECTCLD 193
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQND 363
+V C KGL +P +P+ TEL +D L+ +S N+K T L N
Sbjct: 194 TVVRCSNKGLKALPKGIPKDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNNR 246
Query: 364 ITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I+ L ++F+N +L + L N + +P + F K LR +
Sbjct: 247 ISTLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLL 288
>gi|15281511|gb|AAK94291.1|AF364045_1 Slit2 protein [Gallus gallus]
Length = 950
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 134/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+CHL+WL WL++ + +C P
Sbjct: 57 SLYDNQITTVAPGSFDTLHSLSTLNLLANPFNCNCHLAWLGDWLRKKRIVTGNPRCQKPY 116
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C KGL +P +P
Sbjct: 117 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPAECTCLDTVVRCSNKGLKALPKGIP 174
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
+ TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 175 KDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 233
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 234 LRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 293
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 294 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 330
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 127/282 (45%), Gaps = 35/282 (12%)
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL 184
EL L N + + K F + L+ + L N++S V D+F GL S+ L+L +N +
Sbjct: 4 GVNELLLTSNRLETVRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQI 63
Query: 185 TYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNI 244
T + G F L L TL + N F C+CHL+WL WL++ + +C P +K I
Sbjct: 64 TTVAPGSFDTLHSLSTLNLLANPFNCNCHLAWLGDWLRKKRIVTGNPRCQKPYFLKEIPI 123
Query: 245 LDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKPTGECAAEPSCPHPCRCAD 303
D+ +F C D + NSC P+ + CP C C D
Sbjct: 124 QDVAIQDFTCD-----------------DGNDDNSCSPLSR----------CPAECTCLD 156
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQND 363
+V C KGL +P +P+ TEL +D L+ +S N+K T L N
Sbjct: 157 TVVRCSNKGLKALPKGIPKDVTELY----LDGNQFTLVPKELS-NYKHLT--LIDLSNNR 209
Query: 364 ITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I+ L ++F+N +L + L N + +P + F K LR +
Sbjct: 210 ISTLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLL 251
>gi|4151259|gb|AAD04345.1| neurogenic extracellular slit protein [Mus musculus]
Length = 1025
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 132/277 (47%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+CHL+WL WL+R + +C P
Sbjct: 132 SLYDNQITTVAPGAFDXLHSLSTLNLLANPFNCNCHLAWLGEWLRRKRIVTGNPRCQKPY 191
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D V C KGL +P +P
Sbjct: 192 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPSECTCLDTXVRCSNKGLKVLPKGIP 249
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVD----------------- 166
+ TEL L+ N T L PK +NYK L IDLS N+IS ++
Sbjct: 250 KDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQXFSNMTQLLTLILSYNR 308
Query: 167 -------AFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
F GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 309 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 368
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 369 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 405
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 149/360 (41%), Gaps = 84/360 (23%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRID 154
+CP CRC VDC + LNK+P +P+ T ELRL N+ T L F +LR I+
Sbjct: 1 ACPEKCRCEGTTVDCSNQRLNKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRXIN 60
Query: 155 LSKNQISKVAVDAFQG------------------------LKSLTS-------------- 176
S N+I+ + AF+G L+SL +
Sbjct: 61 FSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGND 120
Query: 177 ----------LTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPR 226
L+L +N +T + G F L L TL + N F C+CHL+WL WL+R
Sbjct: 121 SFIGLGSVRLLSLYDNQITTVAPGAFDXLHSLSTLNLLANPFNCNCHLAWLGEWLRRKRI 180
Query: 227 LGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC-PVEKP 285
+ +C P +K I D+ +F C D + NSC P+ +
Sbjct: 181 VTGNPRCQKPYFLKEIPIQDVAIQDFTCD-----------------DGNDDNSCSPLSR- 222
Query: 286 TGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYI 345
CP C C D V C KGL +P +P+ TEL +D L+ +
Sbjct: 223 ---------CPSECTCLDTXVRCSNKGLKVLPKGIPKDVTELY----LDGNQFTLVPKEL 269
Query: 346 SNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
S N+K T L N I+ L + F+N +L + L N + +PP+ F K LR +
Sbjct: 270 S-NYKHLT--LIDLSNNRISTLSNQXFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 326
>gi|426365740|ref|XP_004049926.1| PREDICTED: slit homolog 1 protein-like [Gorilla gorilla gorilla]
Length = 927
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 135/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 36 SLYDNQITTVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWLRKRKIVTGNPRCQNPD 95
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ G C P CP C C D +V C K L +P +P
Sbjct: 96 FLRQIPLQDVAFPDFRCEEGQEE--GSCLPRPQCPQECACLDTVVRCSNKHLRALPKGIP 153
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN--- 180
+ TEL L+ N T L P + +K L+ +DLS N+IS ++ +F + LT+L L+
Sbjct: 154 KNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 212
Query: 181 ---------------------NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
N+++ L +G+FA++ L L I N CDCHL WL
Sbjct: 213 LRCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSS 272
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 273 WVKTGYKEPGIARCAGPQDMEGKLLLTTPAKKFECQG 309
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 109/253 (43%), Gaps = 33/253 (13%)
Query: 144 FANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRI 203
F LR + L N+IS + D+F GL+++ L+L +N +T + G F L L TL +
Sbjct: 2 FRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNL 61
Query: 204 SENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
N F C+C L+WL WL++ + +C P ++ + D+ +F+C E
Sbjct: 62 LANPFNCNCQLAWLGGWLRKRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRCEEGQEE--- 118
Query: 264 KIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEA 323
G C P CP C C D +V C K L +P +P+
Sbjct: 119 -----------------------GSCLPRPQCPQECACLDTVVRCSNKHLRALPKGIPKN 155
Query: 324 TTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRL 383
TEL +D L+ +S FK + L N I+ L +F N +L + L
Sbjct: 156 VTELY----LDGNQFTLVPGQLS-TFKYL--QLVDLSNNKISSLSNSSFTNMSQLTTLIL 208
Query: 384 EQNDITELPPKAF 396
N + +PP AF
Sbjct: 209 SYNALRCIPPLAF 221
>gi|350587401|ref|XP_003128925.3| PREDICTED: LOW QUALITY PROTEIN: slit homolog 2 protein [Sus scrofa]
Length = 1050
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 132/277 (47%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 156 SLYDNQITTIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 215
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+K I D+ +F C + + C+ CP C C D +V C K L +P +P
Sbjct: 216 FLKEIPIQDVAIQDFTCDDGNDDNS--CSPLSRCPTECTCLDTVVRCSNKALKVLPKGIP 273
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ-------------- 169
TEL L+ N T L PK +NYK L IDLS N+IS ++ +F
Sbjct: 274 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 332
Query: 170 ----------GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
GLKSL L+L+ N+++ +P+G F +L L L I N CDC++ WL
Sbjct: 333 LRCLPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 392
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P + + +L P +F C G
Sbjct: 393 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG 429
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 156/373 (41%), Gaps = 87/373 (23%)
Query: 86 KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKA-F 144
K +G+C A+ +CP CRC VDC + L+K+P +P+ T ELRL N+ T L F
Sbjct: 12 KLSGDCFADLACPEKCRCEGTTVDCSNQKLSKIPDHIPQYTAELRLNNNEFTVLEATGIF 71
Query: 145 ANYKRLRRID-------------------------------------------------- 154
+LR+I+
Sbjct: 72 KKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQYKMFKGLESLKTLXVF 131
Query: 155 -LSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH 213
LS N+IS V D+F GL S+ L+L +N +T + G F L L TL + N F C+C+
Sbjct: 132 LLSSNRISCVGNDSFIGLSSVRLLSLYDNQITTIAPGAFDTLHSLSTLNLLANPFNCNCY 191
Query: 214 LSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTD 273
L+WL WL++ + +C P +K I D+ +F C D
Sbjct: 192 LAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCD-----------------D 234
Query: 274 FHPYNSC-PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS 332
+ NSC P+ + CP C C D +V C K L +P +P TEL
Sbjct: 235 GNDDNSCSPLSR----------CPTECTCLDTVVRCSNKALKVLPKGIPRDVTELY---- 280
Query: 333 IDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELP 392
+D L+ +S N+K T L N I+ L ++F+N +L + L N + LP
Sbjct: 281 LDGNQFTLVPKELS-NYKHLT--LIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCLP 337
Query: 393 PKAFANYKRLRRM 405
P+ F K LR +
Sbjct: 338 PRTFDGLKSLRLL 350
>gi|55846678|gb|AAV67343.1| slit 1 [Macaca fascicularis]
Length = 1044
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 134/277 (48%), Gaps = 27/277 (9%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C C L+WL WL++ + +C P
Sbjct: 153 SLYDNQITTVSPGAFDTLQSLXTLNLLANPFXCXCQLAWLGGWLRKRKIVTGNPRCQNPD 212
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ G C P CP C C D +V C K L +P +P
Sbjct: 213 FLRQIPLQDVAFPDFRCEEGQEE--GGCLPRPQCPQECACLDTVVRCSNKHLRALPKGIP 270
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN--- 180
+ TEL L+ N T L P + +K L+ +DLS N+IS ++ +F + LT+L L+
Sbjct: 271 KNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 329
Query: 181 ---------------------NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
N+++ L +G+FA++ L L I N CDCHL WL
Sbjct: 330 LQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSS 389
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K + +C P ++G+ +L P +F+C G
Sbjct: 390 WVKTGYKEPGIARCAGPLDMEGKLLLTTPAKKFECQG 426
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 142/356 (39%), Gaps = 82/356 (23%)
Query: 90 ECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKA-FANYK 148
EC ++ CPH CRC +V+C L K+P +P++T ELRL N+I+ L F
Sbjct: 16 ECNSDVICPHKCRCEASVVECSSLKLTKIPERIPQSTAELRLNNNEISILEATGMFKKLT 75
Query: 149 RLRRIDLSKNQISKVAVDAFQG------------------------LKSLTSLTLNN--- 181
L++I+LS N++S++ AF+G L L +L L N
Sbjct: 76 HLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRI 135
Query: 182 ---------------------NNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW 220
N +T + G F L L TL + N F C C L+WL W
Sbjct: 136 SCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLXTLNLLANPFXCXCQLAWLGGW 195
Query: 221 LKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC 280
L++ + +C P ++ + D+ +F+C E
Sbjct: 196 LRKRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRCEEGQEE-------------------- 235
Query: 281 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL 340
G C P CP C C D +V C K L +P +P+ TEL +D L
Sbjct: 236 ------GGCLPRPQCPQECACLDTVVRCSNKHLRALPKGIPKNVTELY----LDGNQFTL 285
Query: 341 LYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
+ +S FK + L N I+ L +F N +L + L N + +PP AF
Sbjct: 286 VPGQLS-TFKYL--QLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAF 338
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 7/119 (5%)
Query: 288 ECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISN 347
EC ++ CPH CRC +V+C L K+P +P++T EL ++ + +L + +
Sbjct: 16 ECNSDVICPHKCRCEASVVECSSLKLTKIPERIPQSTAEL----RLNNNEISILEA--TG 69
Query: 348 NFKRWTNRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
FK+ T+ + L N ++E+ AF + + L N + + F LR +
Sbjct: 70 MFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTL 128
>gi|312378556|gb|EFR25101.1| hypothetical protein AND_09866 [Anopheles darlingi]
Length = 1540
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 123/229 (53%), Gaps = 9/229 (3%)
Query: 29 ISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGPVEKPT 88
++ N F C+CHL+W WL++ G +C +PS ++ I D+P +FKC+ +++
Sbjct: 10 LASNPFRCNCHLAWFSDWLRKKQLNGPPARCTSPSKVRDMPIKDMPHFDFKCTSDMDQ-- 67
Query: 89 GECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYK 148
C E CP C C +V C L ++P +P TTEL LE N+I+ + ++ K
Sbjct: 68 -GCLGEGYCPPSCTCTGTVVRCSRNKLKEIPKSIPAETTELYLESNEISMIHSNRISHLK 126
Query: 149 RLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
L R+ +S N + V A GL +L L+L+ N ++ +P+G F +L + + N
Sbjct: 127 ALTRLIISYNNLQCVQQYALAGLNNLKVLSLHGNKISMIPEGTFNDLQAITHI----NPL 182
Query: 209 ICDCHLSWLHRWLKR-YPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
CDC L WL W+KR Y G+ +C P ++K + IL P ++F CSG
Sbjct: 183 YCDCSLRWLSEWVKRDYVEPGI-ARCAEPDNMKDKLILSTPSNQFVCSG 230
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 33/203 (16%)
Query: 203 ISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETR 262
++ N F C+CHL+W WL++ G +C +PS ++ I D+P +FKC+ S M+
Sbjct: 10 LASNPFRCNCHLAWFSDWLRKKQLNGPPARCTSPSKVRDMPIKDMPHFDFKCT-SDMDQG 68
Query: 263 SKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 322
C E CP C C +V C L ++P +P
Sbjct: 69 --------------------------CLGEGYCPPSCTCTGTVVRCSRNKLKEIPKSIPA 102
Query: 323 ATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIR 382
TTEL ++ + +++S ++ K T + N++ + A A L+ +
Sbjct: 103 ETTELY----LESNEISMIHSNRISHLKALTRLI--ISYNNLQCVQQYALAGLNNLKVLS 156
Query: 383 LEQNDITELPPKAFANYKRLRRM 405
L N I+ +P F + + + +
Sbjct: 157 LHGNKISMIPEGTFNDLQAITHI 179
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 21/119 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKR-YPRLGLYTKCFAP 62
+L+ N ++ +P+G F +L + + N CDC L WL W+KR Y G+ +C P
Sbjct: 156 SLHGNKISMIPEGTFNDLQAITHI----NPLYCDCSLRWLSEWVKRDYVEPGI-ARCAEP 210
Query: 63 SHIKGQNILDIPEHEFKCSGPVE---------------KPTGECAAEPSCPHPCRCADG 106
++K + IL P ++F CSG V K C+A P + C+C G
Sbjct: 211 DNMKDKLILSTPSNQFVCSGKVSNEILSKCDACYTFPCKNEAVCSALPERQYECKCKPG 269
>gi|15281509|gb|AAK94290.1| Slit1 protein [Gallus gallus]
Length = 738
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 154/325 (47%), Gaps = 36/325 (11%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N ++ + G F L L TL + N F C+C L+WL WL++ + +C P
Sbjct: 53 SLYDNQISTIAPGAFDTLQSLSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQHPD 112
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
++ + D+ +F+C E+ + C P CP C C D +V C K L +P +P
Sbjct: 113 FLRQIPLQDVAFPDFRCEEGQEETS--CIPRPQCPQECTCLDTVVRCSNKHLKALPRGIP 170
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN--- 180
+ TEL L+ N T++P + + +K L+ +DLS N+IS ++ +F + LT+L L+
Sbjct: 171 KNVTELYLDGNQFTQVPGQ-LSTFKYLQLVDLSNNRISSLSNSSFTNMSQLTTLILSYNS 229
Query: 181 ---------------------NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
N+++ LP+G+FA++ L L I N C C+L WL
Sbjct: 230 LQCIPPLAFEGLRSLRLLSLHGNDISTLPEGIFADVTSLSHLAIGANPLYCSCNLRWLSS 289
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
W+K + +C P ++G+ +L P +F+C G S I + +C +P S
Sbjct: 290 WVKTGYKEPGIARCAGPPDMEGKLLLTTPAKKFECQGPP----SLIVQAKC----NPCLS 341
Query: 280 CPVEKPTGECAAEPSCPHPCRCADG 304
P G C +P + C C G
Sbjct: 342 SPCRN-QGTCHNDPLGSYRCACPIG 365
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 125/297 (42%), Gaps = 43/297 (14%)
Query: 126 TTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLT 185
+EL L N + + F LR + L N+IS + D+F GL+++ L+L +N ++
Sbjct: 1 VSELHLTVNQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIS 60
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+ G F L L TL + N F C+C L+WL WL++ + +C P ++ +
Sbjct: 61 TIAPGAFDTLQSLSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQHPDFLRQIPLQ 120
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +F+C ET C P CP C C D +
Sbjct: 121 DVAFPDFRCEEGQEET--------------------------SCIPRPQCPQECTCLDTV 154
Query: 306 VDCREKGLNKVPILLPEATTEL-------TYMVSIDRVDKVLLYSYISNN------FKRW 352
V C K L +P +P+ TEL T + K L +SNN +
Sbjct: 155 VRCSNKHLKALPRGIPKNVTELYLDGNQFTQVPGQLSTFKYLQLVDLSNNRISSLSNSSF 214
Query: 353 TNRSRR----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
TN S+ L N + +PP AF + LR + L NDI+ LP FA+ L +
Sbjct: 215 TNMSQLTTLILSYNSLQCIPPLAFEGLRSLRLLSLHGNDISTLPEGIFADVTSLSHL 271
>gi|158431145|pdb|2V9S|A Chain A, Second Lrr Domain Of Human Slit2
gi|158431146|pdb|2V9S|B Chain B, Second Lrr Domain Of Human Slit2
gi|158431147|pdb|2V9S|C Chain C, Second Lrr Domain Of Human Slit2
gi|158431148|pdb|2V9S|D Chain D, Second Lrr Domain Of Human Slit2
Length = 220
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 106/207 (51%), Gaps = 48/207 (23%)
Query: 97 CPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLS 156
CP C C++ IVDCR KGL ++P LPE TE+RLEQN I +PP AF+ YK+LRRIDLS
Sbjct: 5 CPAACTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLS 64
Query: 157 KNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP---------------------------- 188
NQIS++A DAFQGL+SL SL L N +T LP
Sbjct: 65 NNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINXLRVDAF 124
Query: 189 --------------------DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLG 228
G F+ L ++T+ +++N FICDCHL WL +L P
Sbjct: 125 QDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIET 184
Query: 229 LYTKCFAPSHIKGQNILDIPEHEFKCS 255
+C +P + + I I +F+CS
Sbjct: 185 SGARCTSPRRLANKRIGQIKSKKFRCS 211
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 54/111 (48%), Gaps = 30/111 (27%)
Query: 295 CPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN 354
CP C C++ IVDCR KGL ++P LPE TE+
Sbjct: 5 CPAACTCSNNIVDCRGKGLTEIPTNLPETITEI--------------------------- 37
Query: 355 RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +PP AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 38 ---RLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 85
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 134 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 193
Query: 64 HIKGQNILDIPEHEFKCS 81
+ + I I +F+CS
Sbjct: 194 RLANKRIGQIKSKKFRCS 211
>gi|158431150|pdb|2V9T|B Chain B, Complex Between The Second Lrr Domain Of Slit2 And The
First Ig Domain From Robo1
Length = 220
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 106/207 (51%), Gaps = 48/207 (23%)
Query: 97 CPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLS 156
CP C C++ IVDCR KGL ++P LPE TE+RLEQN I +PP AF+ YK+LRRIDLS
Sbjct: 5 CPAACTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLS 64
Query: 157 KNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP---------------------------- 188
NQIS++A DAFQGL+SL SL L N +T LP
Sbjct: 65 NNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAF 124
Query: 189 --------------------DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLG 228
G F+ L ++T+ +++N FICDCHL WL +L P
Sbjct: 125 QDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIET 184
Query: 229 LYTKCFAPSHIKGQNILDIPEHEFKCS 255
+C +P + + I I +F+CS
Sbjct: 185 SGARCTSPRRLANKRIGQIKSKKFRCS 211
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 54/111 (48%), Gaps = 30/111 (27%)
Query: 295 CPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN 354
CP C C++ IVDCR KGL ++P LPE TE+
Sbjct: 5 CPAACTCSNNIVDCRGKGLTEIPTNLPETITEI--------------------------- 37
Query: 355 RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +PP AF+ YK+LRRI L N I+EL P AF + L +
Sbjct: 38 ---RLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 85
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 134 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 193
Query: 64 HIKGQNILDIPEHEFKCS 81
+ + I I +F+CS
Sbjct: 194 RLANKRIGQIKSKKFRCS 211
>gi|324500884|gb|ADY40401.1| Protein slit [Ascaris suum]
Length = 1161
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 133/278 (47%), Gaps = 29/278 (10%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTKCFAPS 63
L+NN++ + +G +L + ++ + N FIC+CH++ +L+ R+ KC P
Sbjct: 337 LSNNSIRCIAEGAMLQLPNIHSIAVGNNDFICNCHIADFANYLRVNGSRVLDSPKCHEPK 396
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H +G+ I + + E C E E CP C C +V C + L + P +P
Sbjct: 397 HFRGRPIATVNKDELSCKSAAENVCAE--NGTYCPAGCICQGTVVRCSNRALKEFPPGIP 454
Query: 124 EATTELRLEQNDITELP------------------------PKAFANYKRLRRIDLSKNQ 159
TTEL L+ NDIT +P AFAN +L + LS N+
Sbjct: 455 LETTELFLDSNDITSIPLAQLNKLYQLAKLDLSHNRITVIESGAFANLTKLSTLILSYNK 514
Query: 160 ISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
+ + AF L +L L+L+ N+L+ LP+ FA L + + + N+ CDCH++W +
Sbjct: 515 LQCLEPAAFSALSNLRILSLHGNDLSVLPESAFANLTNITHIALGSNALYCDCHMAWFSK 574
Query: 220 WLK-RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
W+K R+ G+ +C P + Q +L EH FKC G
Sbjct: 575 WIKARFVEAGI-ARCELPLSTRNQLLLTANEHHFKCEG 611
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/474 (24%), Positives = 190/474 (40%), Gaps = 104/474 (21%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
+NN+ + +G F L L TL ++ N ICDC+L WL L +C +P +
Sbjct: 112 DNNIKSIANGTFDGLTNLMTLHLARNPIICDCNLEWLAMLLSIRAVETSGARCESPKRVA 171
Query: 67 GQNILDIPEHEFKCSGP---VEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+ + + +F+C G V EC + CP C C IVDC ++GL + P +P
Sbjct: 172 RRRLATLHHSKFRCKGSESYVTARADECIIDYGCPVECSCHGSIVDCSKRGLTEFPSNIP 231
Query: 124 EATTELRLEQNDITELPPKAFANYKRL---RRIDLSKNQISKVAVDAFQGLKSLTSL--- 177
TTEL + N I+ + + AN++RL +++ L N+IS + + A LK+LT L
Sbjct: 232 LFTTELHMSHNKISSI--RNSANFRRLTNLKKLILRDNEISSIEIGALSNLKNLTELDLS 289
Query: 178 ----------------------------------------------TLNNNNLTYLPDGV 191
L+NN++ + +G
Sbjct: 290 ENRLRHFSASQLGESSSTLQTLLLNNNQIECITSSSLRSLTSLHIMNLSNNSIRCIAEGA 349
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTKCFAPSHIKGQNILDIPEH 250
+L + ++ + N FIC+CH++ +L+ R+ KC P H +G+ I + +
Sbjct: 350 MLQLPNIHSIAVGNNDFICNCHIADFANYLRVNGSRVLDSPKCHEPKHFRGRPIATVNKD 409
Query: 251 EFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPS-CPHPCRCADGIVDCR 309
E C ++ CA + CP C C +V C
Sbjct: 410 ELSCKSAAENV---------------------------CAENGTYCPAGCICQGTVVRCS 442
Query: 310 EKGLNKVPILLPEATTEL------TYMVSIDRVDKVLLYSYI-----------SNNFKRW 352
+ L + P +P TTEL + + +++K+ + + S F
Sbjct: 443 NRALKEFPPGIPLETTELFLDSNDITSIPLAQLNKLYQLAKLDLSHNRITVIESGAFANL 502
Query: 353 TNRSRR-LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
T S L N + L P AF+ LR + L ND++ LP AFAN + +
Sbjct: 503 TKLSTLILSYNKLQCLEPAAFSALSNLRILSLHGNDLSVLPESAFANLTNITHI 556
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 134/305 (43%), Gaps = 76/305 (24%)
Query: 131 LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP-- 188
LEQN IT +PP+AF N RL+R+DLSKN I ++A AF GL+SL SL L N+LT LP
Sbjct: 14 LEQNQITYIPPRAFHNLYRLKRLDLSKNSIVEIAPRAFDGLRSLNSLVLYGNSLTDLPSE 73
Query: 189 ----------------------------------------------DGVFAELFRLRTLR 202
+G F L L TL
Sbjct: 74 AFHGLFNIQLLLLNANKLQCLRKETFKNLSNLNLLSLYDNNIKSIANGTFDGLTNLMTLH 133
Query: 203 ISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETR 262
++ N ICDC+L WL L +C +P + + + + +F+C GS E+
Sbjct: 134 LARNPIICDCNLEWLAMLLSIRAVETSGARCESPKRVARRRLATLHHSKFRCKGS--ESY 191
Query: 263 SKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 322
+EC D+ CPVE C C IVDC ++GL + P +P
Sbjct: 192 VTARADECIIDY----GCPVE---------------CSCHGSIVDCSKRGLTEFPSNIPL 232
Query: 323 ATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRR-LEQNDITELPPKAFANYKRLRRI 381
TTEL +S +++ + S NF+R TN + L N+I+ + A +N K L +
Sbjct: 233 FTTEL--HMSHNKISSI----RNSANFRRLTNLKKLILRDNEISSIEIGALSNLKNLTEL 286
Query: 382 RLEQN 386
L +N
Sbjct: 287 DLSEN 291
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTKCFAP 62
+L+ N+L+ LP+ FA L + + + N+ CDCH++W +W+K R+ G+ +C P
Sbjct: 533 SLHGNDLSVLPESAFANLTNITHIALGSNALYCDCHMAWFSKWIKARFVEAGI-ARCELP 591
Query: 63 SHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCR 102
+ Q +L EH FKC GP+ K T +P +PCR
Sbjct: 592 LSTRNQLLLTANEHHFKCEGPLPK-TVLAKCDPCIDNPCR 630
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 359 LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
LEQN IT +PP+AF N RL+R+ L +N I E+ P+AF + L +
Sbjct: 14 LEQNQITYIPPRAFHNLYRLKRLDLSKNSIVEIAPRAFDGLRSLNSL 60
>gi|355720605|gb|AES06986.1| slit-like protein 2 [Mustela putorius furo]
Length = 885
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 124/265 (46%), Gaps = 27/265 (10%)
Query: 16 GVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPE 75
G F L L TL + N F C+C+L+WL WL++ + +C P +K I D+
Sbjct: 5 GAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAI 64
Query: 76 HEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQND 135
+F C + + C+ CP C C D +V C K L +P +P TEL L+ N
Sbjct: 65 QDFTCDDGNDDSS--CSPLSRCPTECSCLDTVVRCSNKALKVLPKGIPRDVTELYLDGNQ 122
Query: 136 ITELPPKAFANYKRLRRIDLSKNQISKVAVDAF------------------------QGL 171
T L PK NYK L IDLS N+IS ++ +F GL
Sbjct: 123 FT-LVPKELYNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGL 181
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
KSL L+L+ N+++ +P+G F +L L L I N CDC++ WL W+K +
Sbjct: 182 KSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIA 241
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSG 256
+C P + + +L P +F C G
Sbjct: 242 RCAGPGEMADKLLLTTPSKKFTCQG 266
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 96/233 (41%), Gaps = 43/233 (18%)
Query: 190 GVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPE 249
G F L L TL + N F C+C+L+WL WL++ + +C P +K I D+
Sbjct: 5 GAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAI 64
Query: 250 HEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCR 309
+F C + ++ CS P + CP E C C D +V C
Sbjct: 65 QDFTCDDGNDDS-------SCS----PLSRCPTE---------------CSCLDTVVRCS 98
Query: 310 EKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSY-------ISNN-FKRWTNRSRR--- 358
K L +P +P TEL + + LY+Y +SNN +N+S
Sbjct: 99 NKALKVLPKGIPRDVTELYLDGNQFTLVPKELYNYKHLTLIDLSNNRISTLSNQSFSNMT 158
Query: 359 ------LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +PP+ F K LR + L NDI+ +P AF + L +
Sbjct: 159 QLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHL 211
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L+ N+++ +P+G F +L L L I N CDC++ WL W+K + +C P
Sbjct: 188 SLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPG 247
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ + +L P +F C GPV+
Sbjct: 248 EMADKLLLTTPSKKFTCQGPVD 269
>gi|311350284|gb|ADP92342.1| slit-like protein 3 [Taeniopygia guttata]
Length = 259
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 113/211 (53%), Gaps = 4/211 (1%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C P
Sbjct: 5 SLYDNKLQTVSKGLFAPLRSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSNPR 64
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K TG+C + CP CRC +VDC + L ++P
Sbjct: 65 RLANKRISQIKSKKFRCSGSEDYRSKFTGKCFMDLVCPEKCRCEGTVVDCSNQKLARLPT 124
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTL 179
LPE TT+LRL NDI+ L F LR+I+LS N+I ++ AF G + L L
Sbjct: 125 HLPEYTTDLRLNDNDISVLEAVGLFKKLPNLRKINLSNNKIKEIREGAFDGASGVQELIL 184
Query: 180 NNNNLTYLPDGVFAELFRLRTLRISENSFIC 210
N L + +F L L+TL + NS C
Sbjct: 185 TENQLESVHGRMFRGLTGLKTLMLRSNSISC 215
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 109/234 (46%), Gaps = 30/234 (12%)
Query: 174 LTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKC 233
L L+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C
Sbjct: 1 LKLLSLYDNKLQTVSKGLFAPLRSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARC 60
Query: 234 FAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEP 293
P + + I I +F+CSGS + RSK TG+C +
Sbjct: 61 SNPRRLANKRISQIKSKKFRCSGSE-DYRSKF--------------------TGKCFMDL 99
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
CP CRC +VDC + L ++P LPE TT+L + I ++ V L FK+
Sbjct: 100 VCPEKCRCEGTVVDCSNQKLARLPTHLPEYTTDLRLNDNDISVLEAVGL-------FKKL 152
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R L N I E+ AF ++ + L +N + + + F L+ +
Sbjct: 153 PNLRKINLSNNKIKEIREGAFDGASGVQELILTENQLESVHGRMFRGLTGLKTL 206
>gi|268054325|gb|ACY92649.1| slit-like protein [Saccoglossus kowalevskii]
Length = 867
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 143/328 (43%), Gaps = 42/328 (12%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + + G F L L TL + N F C+CHL WL WLK + +C APS
Sbjct: 51 SLYDNQIRTVMPGSFDNLKELSTLNLLSNPFNCNCHLGWLADWLKSRTIVTGNPRCQAPS 110
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++ I D+ +++F C + C +CP C C +V C K L P +P
Sbjct: 111 HLREIPIQDLKKYDFSCDSNNDN---SCLPSLACPRNCACYGTVVRCSNKQLTNPPYNIP 167
Query: 124 EATTELRLEQNDITELPPKA----------------------FANYKRLRRIDLSKNQIS 161
TTEL L+ N + +P + FAN +L + LS N I
Sbjct: 168 NETTELYLDVNKLKSIPDLSRLKNLHTIDLSNNDITTITNTTFANLPKLATLILSYNHIG 227
Query: 162 KVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL 221
+ F+GL SL L+L+ N+++ LP G F EL L + + N CDC L WL W+
Sbjct: 228 CIPPGTFRGLHSLRILSLHGNDISTLPSGAFDELESLSHIALGANPLYCDCSLRWLSDWV 287
Query: 222 KRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG----SSMETRSKIYREECSTDFHPY 277
K + +C P +++ + +L P +F+C+ S + + E C D
Sbjct: 288 KSGFKEPGIARCSGPYNLQEKLLLTAPTRKFECNEIPDLSILAKCNPCLAEPCLND---- 343
Query: 278 NSCPVEKPTGECAAEPSCPHPCRCADGI 305
GEC + C+CA G
Sbjct: 344 ---------GECHNGEYAGYICKCASGF 362
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 120/293 (40%), Gaps = 47/293 (16%)
Query: 131 LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDG 190
L N ++++ F + L+ I L NQIS + + F GL + L+L +N + + G
Sbjct: 4 LTNNKLSKVKGSMFVGVRNLKTIMLRSNQISCINNETFSGLTKVRLLSLYDNQIRTVMPG 63
Query: 191 VFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEH 250
F L L TL + N F C+CHL WL WLK + +C APSH++ I D+ ++
Sbjct: 64 SFDNLKELSTLNLLSNPFNCNCHLGWLADWLKSRTIVTGNPRCQAPSHLREIPIQDLKKY 123
Query: 251 EFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCRE 310
+F C ++ + C +CP C C +V C
Sbjct: 124 DFSCDSNNDNS---------------------------CLPSLACPRNCACYGTVVRCSN 156
Query: 311 KGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISN--------------NFKRWTNRS 356
K L P +P TTEL + ++++ + S + N + N
Sbjct: 157 KQLTNPPYNIPNETTEL--YLDVNKLKSIPDLSRLKNLHTIDLSNNDITTITNTTFANLP 214
Query: 357 RR----LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L N I +PP F LR + L NDI+ LP AF + L +
Sbjct: 215 KLATLILSYNHIGCIPPGTFRGLHSLRILSLHGNDISTLPSGAFDELESLSHI 267
>gi|291236825|ref|XP_002738338.1| PREDICTED: slit-like protein [Saccoglossus kowalevskii]
Length = 852
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 143/328 (43%), Gaps = 42/328 (12%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N + + G F L L TL + N F C+CHL WL WLK + +C APS
Sbjct: 36 SLYDNQIRTVMPGSFDNLKELSTLNLLSNPFNCNCHLGWLADWLKSRTIVTGNPRCQAPS 95
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++ I D+ +++F C + C +CP C C +V C K L P +P
Sbjct: 96 HLREIPIQDLKKYDFSCDSNNDN---SCLPSLACPRNCACYGTVVRCSNKQLTNPPYNIP 152
Query: 124 EATTELRLEQNDITELPPKA----------------------FANYKRLRRIDLSKNQIS 161
TTEL L+ N + +P + FAN +L + LS N I
Sbjct: 153 NETTELYLDVNKLKSIPDLSRLKNLHTIDLSNNDITTITNTTFANLPKLATLILSYNHIG 212
Query: 162 KVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL 221
+ F+GL SL L+L+ N+++ LP G F EL L + + N CDC L WL W+
Sbjct: 213 CIPPGTFRGLHSLRILSLHGNDISTLPSGAFDELESLSHIALGANPLYCDCSLRWLSDWV 272
Query: 222 KRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG----SSMETRSKIYREECSTDFHPY 277
K + +C P +++ + +L P +F+C+ S + + E C D
Sbjct: 273 KSGFKEPGIARCSGPYNLQEKLLLTAPTRKFECNEIPDLSILAKCNPCLAEPCLND---- 328
Query: 278 NSCPVEKPTGECAAEPSCPHPCRCADGI 305
GEC + C+CA G
Sbjct: 329 ---------GECHNGEYAGYICKCASGF 347
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 114/280 (40%), Gaps = 47/280 (16%)
Query: 144 FANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRI 203
F + L+ I L NQIS + + F GL + L+L +N + + G F L L TL +
Sbjct: 2 FVGVRNLKTIMLRSNQISCINNETFSGLTKVRLLSLYDNQIRTVMPGSFDNLKELSTLNL 61
Query: 204 SENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
N F C+CHL WL WLK + +C APSH++ I D+ +++F C ++ +
Sbjct: 62 LSNPFNCNCHLGWLADWLKSRTIVTGNPRCQAPSHLREIPIQDLKKYDFSCDSNNDNS-- 119
Query: 264 KIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEA 323
C +CP C C +V C K L P +P
Sbjct: 120 -------------------------CLPSLACPRNCACYGTVVRCSNKQLTNPPYNIPNE 154
Query: 324 TTELTYMVSIDRVDKVLLYSYISN--------------NFKRWTNRSRR----LEQNDIT 365
TTEL + ++++ + S + N + N + L N I
Sbjct: 155 TTEL--YLDVNKLKSIPDLSRLKNLHTIDLSNNDITTITNTTFANLPKLATLILSYNHIG 212
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+PP F LR + L NDI+ LP AF + L +
Sbjct: 213 CIPPGTFRGLHSLRILSLHGNDISTLPSGAFDELESLSHI 252
>gi|313246566|emb|CBY35461.1| unnamed protein product [Oikopleura dioica]
Length = 1479
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 119/465 (25%), Positives = 189/465 (40%), Gaps = 99/465 (21%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL---KRYPRLGLYTKCFA 61
L+ N +++ G+F +L +L+TL + + CDC +S+ +L +R + +T C
Sbjct: 77 LSENMISFFQPGIFDKLKKLKTLSVEKLPLYCDCQISYFISYLDSKRRSEGIAPHTTCSG 136
Query: 62 PSHIKG-----QNILDIPEHEFKCSGPVEKP-TGECAAEPSCPHPCRCADGIVD-----C 110
G + I D+ C + P +C EP+CP C C D C
Sbjct: 137 GRLKDGDLSMHELIRDLDPSRLYCPTSYDLPEMRKCPDEPTCPAECSCKAATSDTIHMNC 196
Query: 111 REKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQG 170
R+K L KVP PE L LE N++TEL + F Y+R++ +DLSKN+I + AF G
Sbjct: 197 RDKRLQKVPKHGPENVVNLILEDNELTELRAREFTQYRRIQGLDLSKNKIETIDEKAFDG 256
Query: 171 LKSLTSL------------------------------------------------TLNNN 182
L +L L L+NN
Sbjct: 257 LVNLQKLYLYENQLTSIGPGTLNGLRGLQTIMMNSNKLKCLPADLLSDQRGSLIIALHNN 316
Query: 183 NLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQ 242
LT LP+G + +++TL + +N + CDC L WL + L KC P + G
Sbjct: 317 ELTTLPNGFLSSNKKIQTLMLFDNPWNCDCQLKWLADYFDSSRTRALRAKCAGPGNKAGT 376
Query: 243 NILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCA 302
+ ++ + + KCS Y E H ++C V+ CP C C
Sbjct: 377 LLQNLNKSDLKCSR---------YEE------HSVSTCDVK-----------CPRGCSCD 410
Query: 303 --DGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLE 360
G V C + + V P ++M S+D + L + + R+ + L
Sbjct: 411 ARSGGVRCIGQNWSSVNFPFP------SFMTSLDLSNNKL--RELPKSLSRYALKELILI 462
Query: 361 QNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N + EL F +K L ++L+ N+I LP AF+ L+ +
Sbjct: 463 NNQL-ELSVDMFKEFKMLEILKLDGNNIESLPQFAFSGLTNLKEL 506
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 111/462 (24%), Positives = 174/462 (37%), Gaps = 96/462 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
L+NN LT LP+G + +++TL + +N + CDC L WL + L KC P
Sbjct: 312 ALHNNELTTLPNGFLSSNKKIQTLMLFDNPWNCDCQLKWLADYFDSSRTRALRAKCAGPG 371
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCA--DGIVDCREKGLNKVPIL 121
+ G + ++ + + KCS E C + CP C C G V C + + V
Sbjct: 372 NKAGTLLQNLNKSDLKCSRYEEHSVSTCDVK--CPRGCSCDARSGGVRCIGQNWSSVNFP 429
Query: 122 LPEATTE---------------------------------------------LRLEQNDI 136
P T L+L+ N+I
Sbjct: 430 FPSFMTSLDLSNNKLRELPKSLSRYALKELILINNQLELSVDMFKEFKMLEILKLDGNNI 489
Query: 137 TELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ--GLKSLTSLTLNNNNLTYLPDGVFAE 194
LP AF+ L+ + L N+IS +A D F + L+ L L NNL + DG +
Sbjct: 490 ESLPQFAFSGLTNLKELSLRNNEISCIANDTFTPFDMHKLSRLDLYENNLQEIGDGTLQQ 549
Query: 195 LFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT--KCFAPSHIKGQNILDIPEHEF 252
L L I N C+C ++++ + ++ KC P +++G ILDIP +
Sbjct: 550 LSTLEYFNILNNPVNCNCLFQSTAKYMQSMQKQIAFSSPKCNEPQYLEGFYILDIPLSDL 609
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD--GIVDCRE 310
KC+ P E +C CP C C + IVDC
Sbjct: 610 KCA-------------------------PGETDHVKCQTGSKCPRKCHCNEKTKIVDCSN 644
Query: 311 KGLNKVPI-LLPEATTELTY-------MVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQ- 361
L + + ++P T EL + + R ++ L SN + + + L +
Sbjct: 645 LQLTSIELEMIPTDTKELLLKNNQIESLPELHRFKELELLDLSSNRIRGISPNTFSLPKL 704
Query: 362 -------NDITELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
N I L +FA L + L +N I ++P AF
Sbjct: 705 KFLMLAGNRIGCLIENSFAGLPNLNMLTLNENRIKKIPESAF 746
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 124/272 (45%), Gaps = 33/272 (12%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT--KCFAP 62
L NNL + DG +L L I N C+C ++++ + ++ KC P
Sbjct: 534 LYENNLQEIGDGTLQQLSTLEYFNILNNPVNCNCLFQSTAKYMQSMQKQIAFSSPKCNEP 593
Query: 63 SHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADG--IVDCREKGLNKVPI 120
+++G ILDIP + KC+ P E +C CP C C + IVDC L + +
Sbjct: 594 QYLEGFYILDIPLSDLKCA-PGETDHVKCQTGSKCPRKCHCNEKTKIVDCSNLQLTSIEL 652
Query: 121 -LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVA--------------- 164
++P T EL L+ N I LP +K L +DLS N+I ++
Sbjct: 653 EMIPTDTKELLLKNNQIESLP--ELHRFKELELLDLSSNRIRGISPNTFSLPKLKFLMLA 710
Query: 165 --------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAE--LFRLRTLRISENSFICDCHL 214
++F GL +L LTLN N + +P+ F L + + +S+N CDC L
Sbjct: 711 GNRIGCLIENSFAGLPNLNMLTLNENRIKKIPESAFPAQVLNSIDRISLSDNELDCDCKL 770
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILD 246
WL RW+++ +C +PS +KG +LD
Sbjct: 771 EWLARWIQQEHTETGEAECASPSKLKGLTLLD 802
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 119/308 (38%), Gaps = 82/308 (26%)
Query: 131 LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDG 190
L +ND+T LP K F KRL ++D+S N++ + F+ K L +L + N L+ L +
Sbjct: 5 LNENDLTRLPSKLFHQLKRLIKLDISNNELLSLHKRQFRRSKKLKALNVTGNKLSCLDEN 64
Query: 191 VFAELFRLRTLRISEN--SFI----------------------CDCHLSWLHRWLKRYPR 226
+F RLR L +SEN SF CDC +S+ +L R
Sbjct: 65 LFNSCRRLRELYLSENMISFFQPGIFDKLKKLKTLSVEKLPLYCDCQISYFISYLDSKRR 124
Query: 227 LGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYN-SCPVEKP 285
++ AP CSG ++ + E D P CP
Sbjct: 125 ----SEGIAP--------------HTTCSGGRLKD-GDLSMHELIRDLDPSRLYCPTSYD 165
Query: 286 TGE---CAAEPSCPHPCRCADGIVD-----CREKGLNKVPILLPEATTELTYMVSIDRVD 337
E C EP+CP C C D CR+K L KVP PE L
Sbjct: 166 LPEMRKCPDEPTCPAECSCKAATSDTIHMNCRDKRLQKVPKHGPENVVNLI--------- 216
Query: 338 KVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFA 397
LE N++TEL + F Y+R++ + L +N I + KAF
Sbjct: 217 ---------------------LEDNELTELRAREFTQYRRIQGLDLSKNKIETIDEKAFD 255
Query: 398 NYKRLRRM 405
L+++
Sbjct: 256 GLVNLQKL 263
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 4 TLNNNNLTYLPDGVFAE--LFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFA 61
TLN N + +P+ F L + + +S+N CDC L WL RW+++ +C +
Sbjct: 732 TLNENRIKKIPESAFPAQVLNSIDRISLSDNELDCDCKLEWLARWIQQEHTETGEAECAS 791
Query: 62 PSHIKGQNILD 72
PS +KG +LD
Sbjct: 792 PSKLKGLTLLD 802
>gi|297466603|ref|XP_002704587.1| PREDICTED: slit homolog 2 protein [Bos taurus]
Length = 262
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 117/248 (47%), Gaps = 30/248 (12%)
Query: 81 SGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKV-PILLPEATTELRLEQNDITEL 139
+ P PT + P+ P R+ GL ++ P E ++ L
Sbjct: 24 AAPRPAPTAQ---PPAMAPPSAVGSPAAAPRQPGLMELNHFAFPLGVYEYSCCSTILSAL 80
Query: 140 PPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLR 199
+ +Y R L N IS + AF+ L+ L LTLNNNN+T L F + +LR
Sbjct: 81 DAVSVMDYGYYNR-QLDYNHISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLR 139
Query: 200 TLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSM 259
T R+ N+ CDCHL+WL WL++ PR+GLYT+C PSH++G N+ ++ + EF CSG
Sbjct: 140 TFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQKREFVCSG--- 196
Query: 260 ETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPIL 319
CS H CP C C++ IVDCR KGL ++P
Sbjct: 197 --HQSFMAPSCSV-LH-------------------CPAACTCSNNIVDCRGKGLTEIPTN 234
Query: 320 LPEATTEL 327
LPE TE+
Sbjct: 235 LPETITEM 242
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 81/126 (64%), Gaps = 1/126 (0%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T L F + +LRT R+ N+ CDCHL+WL WL++ PR+GLYT+C PS
Sbjct: 118 TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS 177
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H++G N+ ++ + EF CSG C+ CP C C++ IVDCR KGL ++P LP
Sbjct: 178 HLRGHNVAEVQKREFVCSGHQSFMAPSCSVL-HCPAACTCSNNIVDCRGKGLTEIPTNLP 236
Query: 124 EATTEL 129
E TE+
Sbjct: 237 ETITEM 242
>gi|313238496|emb|CBY13551.1| unnamed protein product [Oikopleura dioica]
Length = 1479
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 119/465 (25%), Positives = 189/465 (40%), Gaps = 99/465 (21%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL---KRYPRLGLYTKCFA 61
L+ N +++ G+F +L +L+TL + + CDC +S+ +L +R + +T C
Sbjct: 77 LSENMISFFQPGIFDKLKKLKTLSVEKLPLYCDCQISYFISYLDSKRRSEGIAPHTTCSG 136
Query: 62 PSHIKG-----QNILDIPEHEFKCSGPVEKP-TGECAAEPSCPHPCRCADGIVD-----C 110
G + I D+ C + P +C EP+CP C C D C
Sbjct: 137 GRLKDGDLSMHELIRDLDPSRLYCPTSYDLPEMRKCPDEPTCPAECSCKAATSDTIHMNC 196
Query: 111 REKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQG 170
R+K L KVP PE L LE N++TEL + F Y+R++ +DLSKN+I + AF G
Sbjct: 197 RDKRLQKVPKHGPENVVNLILEDNELTELRAREFTQYRRIQGLDLSKNKIETIDEKAFDG 256
Query: 171 LKSLTSL------------------------------------------------TLNNN 182
L +L L L+NN
Sbjct: 257 LVNLQKLYLYENQLTSIGPGTLNGLRGLQTIMMNSNKLKCLPADLLSDQRGSLIIALHNN 316
Query: 183 NLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQ 242
LT LP+G + +++TL + +N + CDC L WL + L KC P + G
Sbjct: 317 ELTTLPNGFLSSNKKIQTLMLFDNPWNCDCQLKWLADYFDSSRTRALRAKCAGPGNKAGT 376
Query: 243 NILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCA 302
+ ++ + + KCS Y E H ++C V+ CP C C
Sbjct: 377 LLQNLNKSDLKCSR---------YEE------HSVSTCDVK-----------CPRGCSCD 410
Query: 303 --DGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLE 360
G V C + + V P ++M S+D + L + + R+ + L
Sbjct: 411 ARSGGVRCIGQNWSSVNFPFP------SFMTSLDLSNNKL--RELPKSLSRYALKELILI 462
Query: 361 QNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N + EL F +K L ++L+ N+I LP AF+ L+ +
Sbjct: 463 NNQL-ELSVDMFKEFKMLEILKLDGNNIESLPQFAFSGLTNLKEL 506
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 111/462 (24%), Positives = 174/462 (37%), Gaps = 96/462 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
L+NN LT LP+G + +++TL + +N + CDC L WL + L KC P
Sbjct: 312 ALHNNELTTLPNGFLSSNKKIQTLMLFDNPWNCDCQLKWLADYFDSSRTRALRAKCAGPG 371
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCA--DGIVDCREKGLNKVPIL 121
+ G + ++ + + KCS E C + CP C C G V C + + V
Sbjct: 372 NKAGTLLQNLNKSDLKCSRYEEHSVSTCDVK--CPRGCSCDARSGGVRCIGQNWSSVNFP 429
Query: 122 LPEATTE---------------------------------------------LRLEQNDI 136
P T L+L+ N+I
Sbjct: 430 FPSFMTSLDLSNNKLRELPKSLSRYALKELILINNQLELSVDMFKEFKMLEILKLDGNNI 489
Query: 137 TELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ--GLKSLTSLTLNNNNLTYLPDGVFAE 194
LP AF+ L+ + L N+IS +A D F + L+ L L NNL + DG +
Sbjct: 490 ESLPQFAFSGLTNLKELSLRNNEISCIANDTFTPFDMHKLSRLDLYENNLQEIGDGTLQQ 549
Query: 195 LFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT--KCFAPSHIKGQNILDIPEHEF 252
L L I N C+C ++++ + ++ KC P +++G ILDIP +
Sbjct: 550 LSTLEYFNILNNPVNCNCLFQSTAKYMQSMQKQIAFSSPKCNEPQYLEGFYILDIPLSDL 609
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD--GIVDCRE 310
KC+ P E +C CP C C + IVDC
Sbjct: 610 KCA-------------------------PGETDHVKCQTGSKCPRKCHCNEKTNIVDCSN 644
Query: 311 KGLNKVPI-LLPEATTELTY-------MVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQ- 361
L + + ++P T EL + + R ++ L SN + + + L +
Sbjct: 645 LQLTSIELEMIPTDTKELLLKNNQIESLPELHRFKELELLDLSSNRIRGISPNTFSLPKL 704
Query: 362 -------NDITELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
N I L +FA L + L +N I ++P AF
Sbjct: 705 KFLMLAGNRIGCLIENSFAGLPNLNMLTLNENRIKKIPESAF 746
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 124/272 (45%), Gaps = 33/272 (12%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT--KCFAP 62
L NNL + DG +L L I N C+C ++++ + ++ KC P
Sbjct: 534 LYENNLQEIGDGTLQQLSTLEYFNILNNPVNCNCLFQSTAKYMQSMQKQIAFSSPKCNEP 593
Query: 63 SHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCAD--GIVDCREKGLNKVPI 120
+++G ILDIP + KC+ P E +C CP C C + IVDC L + +
Sbjct: 594 QYLEGFYILDIPLSDLKCA-PGETDHVKCQTGSKCPRKCHCNEKTNIVDCSNLQLTSIEL 652
Query: 121 -LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVA--------------- 164
++P T EL L+ N I LP +K L +DLS N+I ++
Sbjct: 653 EMIPTDTKELLLKNNQIESLP--ELHRFKELELLDLSSNRIRGISPNTFSLPKLKFLMLA 710
Query: 165 --------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAE--LFRLRTLRISENSFICDCHL 214
++F GL +L LTLN N + +P+ F L + + +S+N CDC L
Sbjct: 711 GNRIGCLIENSFAGLPNLNMLTLNENRIKKIPESAFPAQVLNSIDRISLSDNELDCDCKL 770
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILD 246
WL RW+++ +C +PS +KG +LD
Sbjct: 771 EWLARWIQQEHTETGEAECASPSKLKGLTLLD 802
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 119/308 (38%), Gaps = 82/308 (26%)
Query: 131 LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDG 190
L +ND+T LP K F KRL ++D+S N++ + F+ K L +L + N L+ L +
Sbjct: 5 LNENDLTRLPSKLFHQLKRLIKLDISNNELLSLHKRQFRRSKKLKALNVTGNKLSCLDEN 64
Query: 191 VFAELFRLRTLRISEN--SFI----------------------CDCHLSWLHRWLKRYPR 226
+F RLR L +SEN SF CDC +S+ +L R
Sbjct: 65 LFNSCRRLRELYLSENMISFFQPGIFDKLKKLKTLSVEKLPLYCDCQISYFISYLDSKRR 124
Query: 227 LGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYN-SCPVEKP 285
++ AP CSG ++ + E D P CP
Sbjct: 125 ----SEGIAP--------------HTTCSGGRLKD-GDLSMHELIRDLDPSRLYCPTSYD 165
Query: 286 TGE---CAAEPSCPHPCRCADGIVD-----CREKGLNKVPILLPEATTELTYMVSIDRVD 337
E C EP+CP C C D CR+K L KVP PE L
Sbjct: 166 LPEMRKCPDEPTCPAECSCKAATSDTIHMNCRDKRLQKVPKHGPENVVNLI--------- 216
Query: 338 KVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFA 397
LE N++TEL + F Y+R++ + L +N I + KAF
Sbjct: 217 ---------------------LEDNELTELRAREFTQYRRIQGLDLSKNKIETIDEKAFD 255
Query: 398 NYKRLRRM 405
L+++
Sbjct: 256 GLVNLQKL 263
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 4 TLNNNNLTYLPDGVFAE--LFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFA 61
TLN N + +P+ F L + + +S+N CDC L WL RW+++ +C +
Sbjct: 732 TLNENRIKKIPESAFPAQVLNSIDRISLSDNELDCDCKLEWLARWIQQEHTETGEAECAS 791
Query: 62 PSHIKGQNILD 72
PS +KG +LD
Sbjct: 792 PSKLKGLTLLD 802
>gi|126544301|gb|ABC61956.2| slit1 [Schmidtea mediterranea]
Length = 1534
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 189/455 (41%), Gaps = 85/455 (18%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL---GLYTK-CF 60
L N + ++ + + ++L L+ LRI +N C+CHL+WL+ +LK+ + G ++ C
Sbjct: 169 LEGNKIFWISEAI-SKLKHLKELRIHKNKLNCNCHLAWLNWFLKQKSNIIKPGAHSVLCS 227
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEKPTGE--CAAEPS-CPHPCRCA-DGIVDCREKGLN 116
P + I + +EF+C+ +K E C ++ C C C+ DGIV C K L+
Sbjct: 228 TPXXLSHIPISSLSSYEFQCASE-DKANLENMCPSDKKVCSKKCNCSHDGIVKCVGKRLS 286
Query: 117 KVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
+P LP EL L+ N+IT L + YK L++I L++N + + AF GL LTS
Sbjct: 287 NIPQDLPTNVVELDLKDNNITILQQGYLSKYKFLKKIILTRNGMVDIEPGAFLGLTQLTS 346
Query: 177 LTLNNNNLTYLPDGVFAELF------------------------RLRTLRISENSFI--- 209
+ LN NNL + F L RL L +SEN
Sbjct: 347 IYLNENNLKTIRKNAFGGLISLMFLYLQYNDIECLPKDTLESSKRLHLLHLSENKLTSLK 406
Query: 210 ---------------------CDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
CDC +SW+ ++K C P +++G + ++
Sbjct: 407 KETFKPFLNLRYLYLVHNPLNCDCRMSWIVDYIKDKETNTPVAACLQPRNLQGTPLRNLQ 466
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ F+C+ E++ + + E EC + SCP C C+ +V+C
Sbjct: 467 IYNFQCN-KEFESKYETHDE-------------------ECVPKVSCPLKCTCSSDVVNC 506
Query: 309 REKGLNKVP-ILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITEL 367
GL +P + P T + ++ ++ + N K L N I L
Sbjct: 507 SNSGLMSLPESIFPSTKTLIMSHNNLKKLTPIYSIHEAPNLMK------LDLSFNQIETL 560
Query: 368 PPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
P F +LR I L N + + + F N K L
Sbjct: 561 EPDVFTRSSKLREINLNSNRLKCINNETFKNLKEL 595
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 192/460 (41%), Gaps = 73/460 (15%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N LT L F LR L + N CDC +SW+ ++K C P +
Sbjct: 397 LSENKLTSLKKETFKPFLNLRYLYLVHNPLNCDCRMSWIVDYIKDKETNTPVAACLQPRN 456
Query: 65 IKGQNILDIPEHEFKCSGPVEKP----TGECAAEPSCPHPCRCADGIVDCREKGLNKVP- 119
++G + ++ + F+C+ E EC + SCP C C+ +V+C GL +P
Sbjct: 457 LQGTPLRNLQIYNFQCNKEFESKYETHDEECVPKVSCPLKCTCSSDVVNCSNSGLMSLPE 516
Query: 120 ILLPEATT------------------------ELRLEQNDITELPPKAFANYKRLRRIDL 155
+ P T +L L N I L P F +LR I+L
Sbjct: 517 SIFPSTKTLIMSHNNLKKLTPIYSIHEAPNLMKLDLSFNQIETLEPDVFTRSSKLREINL 576
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLS 215
+ N++ + + F+ LK L L L+ N ++ + F L+ L +++N F CDC L
Sbjct: 577 NSNRLKCINNETFKNLKELEILQLSENAISCIVTDSFKNNLNLKYLMLNKNQFHCDCKLK 636
Query: 216 WLHRWLK-RYPRLGLYT--KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECST 272
W+ W + Y LG + C +P +K I + + F C G++ S + C
Sbjct: 637 WMSEWSRNHYTVLGNHRLPTCQSPIILKDTPITHLDDKYFLCDGNASVDHS---VDSC-- 691
Query: 273 DFHPYNSCPVEKPTG--ECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYM 330
H NS G EC CP C+C VDC + L ++P +P+ TTEL
Sbjct: 692 --HETNSVKTCCSIGNEECTKSKKCPSKCKCESTKVDCSDLQLKEIPNEIPKDTTEL--- 746
Query: 331 VSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITEL------PPK------------- 370
+D+ L S +FK N ++ L N ITEL P K
Sbjct: 747 ----YLDRNHLQSLNETSFKNLLNLKTLVLSYNGITELNKNVLTPLKSLEILVLSFNKLQ 802
Query: 371 -----AFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
AF N L+ + L+ ND++ +P +AF + K L +
Sbjct: 803 CIHQDAFKNLHNLKVLILQSNDVSTIPYQAFNDLKNLNNI 842
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 149/353 (42%), Gaps = 80/353 (22%)
Query: 97 CPHPCRCADGIVDCREKGLNKVPILLPEATT----------------------------- 127
CP+ C+C + V+C+ + VP++L E TT
Sbjct: 39 CPNGCQCENYSVECKHRLFPNVPVILQEKTTRLNLLGNRINVIRKSDFLKLNNLKVLQLS 98
Query: 128 -------------------ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAF 168
+LRL +N I LP F+ +L+++DL NQ+ + + F
Sbjct: 99 NNRITSIEPGAFDNLVNLIKLRLNRNLIQYLPDDLFSKLTKLQKLDLRDNQLQCINDNIF 158
Query: 169 QGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL- 227
L L L L N + ++ + + ++L L+ LRI +N C+CHL+WL+ +LK+ +
Sbjct: 159 NKLGMLKYLLLEGNKIFWISEAI-SKLKHLKELRIHKNKLNCNCHLAWLNWFLKQKSNII 217
Query: 228 --GLYTK-CFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEK 284
G ++ C P + I + +EF+C+ E ++ + N CP +K
Sbjct: 218 KPGAHSVLCSTPXXLSHIPISSLSSYEFQCAS---EDKANL-----------ENMCPSDK 263
Query: 285 PTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSY 344
C+ + +C H DGIV C K L+ +P LP EL D +L Y
Sbjct: 264 KV--CSKKCNCSH-----DGIVKCVGKRLSNIPQDLPTNVVELDLK---DNNITILQQGY 313
Query: 345 ISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFA 397
+S K + L +N + ++ P AF +L I L +N++ + AF
Sbjct: 314 LS---KYKFLKKIILTRNGMVDIEPGAFLGLTQLTSIYLNENNLKTIRKNAFG 363
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 131/298 (43%), Gaps = 48/298 (16%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYT--KCFA 61
L+ N ++ + F L+ L +++N F CDC L W+ W + Y LG + C +
Sbjct: 600 LSENAISCIVTDSFKNNLNLKYLMLNKNQFHCDCKLKWMSEWSRNHYTVLGNHRLPTCQS 659
Query: 62 PSHIKGQNILDIPEHEFKCSG--PVEKPTGECAAEPSCPHPCRCAD-------------- 105
P +K I + + F C G V+ C S C +
Sbjct: 660 PIILKDTPITHLDDKYFLCDGNASVDHSVDSCHETNSVKTCCSIGNEECTKSKKCPSKCK 719
Query: 106 ---GIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISK 162
VDC + L ++P +P+ TTEL L++N + L +F N L+ + LS N I++
Sbjct: 720 CESTKVDCSDLQLKEIPNEIPKDTTELYLDRNHLQSLNETSFKNLLNLKTLVLSYNGITE 779
Query: 163 ------------------------VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRL 198
+ DAF+ L +L L L +N+++ +P F +L L
Sbjct: 780 LNKNVLTPLKSLEILVLSFNKLQCIHQDAFKNLHNLKVLILQSNDVSTIPYQAFNDLKNL 839
Query: 199 RTLRISENSFICDCHLSWLHR-WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
+ + +N F CDC++ WL++ +L R+ G+ + C +P +K ++I +F CS
Sbjct: 840 NNIALGQNPFHCDCNIKWLNQFFLDRFLDNGI-SLCASPEKMKLKSIYHSKPTDFICS 896
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 295 CPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYIS-NNFKRWT 353
CP+ C+C + V+C+ + VP++L E TT L + +R++ + ++ NN K
Sbjct: 39 CPNGCQCENYSVECKHRLFPNVPVILQEKTTRLNLLG--NRINVIRKSDFLKLNNLKVL- 95
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+L N IT + P AF N L ++RL +N I LP F+ +L+++
Sbjct: 96 ----QLSNNRITSIEPGAFDNLVNLIKLRLNRNLIQYLPDDLFSKLTKLQKL 143
>gi|6102874|emb|CAB59249.1| hypothetical protein [Homo sapiens]
Length = 333
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 112/211 (53%), Gaps = 4/211 (1%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+ P +C +P
Sbjct: 84 SLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPR 143
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + + + EC + CP CRC IVDC + L ++P
Sbjct: 144 RLANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLVRIPS 203
Query: 121 LLPEATTELRLEQNDITELPPKA-FANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTL 179
LPE T+LRL N+++ L F LR+I+LS N+I +V AF G S+ L L
Sbjct: 204 HLPEYVTDLRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELML 263
Query: 180 NNNNLTYLPDGVFAELFRLRTLRISENSFIC 210
N L + VF L L+TL + N C
Sbjct: 264 TGNQLETVHGRVFRGLSGLKTLMLRSNLIGC 294
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 141/302 (46%), Gaps = 34/302 (11%)
Query: 111 REKGLNKVPILLPEA------TTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVA 164
R+ N++ + P+A T L L N ITE+ F L+ + L+ N+I+ +
Sbjct: 11 RDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIAKGLFDGLVSLQLLLLNANKINCLR 70
Query: 165 VDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRY 224
V+ FQ L++L L+L +N L + G+FA L ++TL +++N F+CDCHL WL +L+
Sbjct: 71 VNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDN 130
Query: 225 PRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEK 284
P +C +P + + I I +F+CSG S+ YR S+
Sbjct: 131 PIETSGARCSSPRRLANKRISQIKSKKFRCSG------SEDYRSRFSS------------ 172
Query: 285 PTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSY 344
EC + CP CRC IVDC + L ++P LPE T+L D VL +
Sbjct: 173 ---ECFMDLVCPEKCRCEGTIVDCSNQKLVRIPSHLPEYVTDLRLN---DNEVSVLEATG 226
Query: 345 ISNNFKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLR 403
I FK+ N R L N I E+ AF ++ + L N + + + F L+
Sbjct: 227 I---FKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLK 283
Query: 404 RM 405
+
Sbjct: 284 TL 285
>gi|358333946|dbj|GAA52401.1| protein slit, partial [Clonorchis sinensis]
Length = 1134
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 137/296 (46%), Gaps = 47/296 (15%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT----KCF 60
LNNN L + G+F +L L +L IS N CDCHLSWL WL+ + C
Sbjct: 75 LNNNKLRCIAKGIFEKL-NLESLSISSNPLKCDCHLSWLPDWLRENVDQVISGPSPPTCV 133
Query: 61 APSHIKGQNILDIPEHEFKCSGPVE---------KPTGE------CAA---EPSCPHPCR 102
P + G + + + F C+ P E +PT E C A CP C
Sbjct: 134 EPEDLAGTPLASLARYHFTCNKPGEECGTSSKLTRPTEERTTRWPCTATTERSKCPDRCT 193
Query: 103 CADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPK-------------------- 142
C V C + GL ++P +PE TT+L LE+N I+E+ P+
Sbjct: 194 CESDGVYCSDLGLTEIPENIPENTTKLYLERNQISEIHPERLEHLTKLHTLVLSYNEIRE 253
Query: 143 ----AFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRL 198
AF+ K L+ + LS N + + +AF+GL L L L NN++ +P G F EL +L
Sbjct: 254 LQENAFSTLKSLKTLVLSHNNLQCIHQNAFKGLGGLRVLILQANNISSVPYGTFKELGQL 313
Query: 199 RTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
+ + +N F CDC+ WL+ + ++ C +P++++ +++ +F C
Sbjct: 314 NNIALGQNPFHCDCNGKWLNSFFRQQFLDNGVALCHSPANMQYKSLYHSKPGDFVC 369
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 116/285 (40%), Gaps = 49/285 (17%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N +T + + L + L NQ+ + F + SL + LNNN L +
Sbjct: 25 LILSNNSLTTFDHRILKGLENLEILLLQHNQLGCLNNFTFSHVPSLKIVMLNNNKLRCIA 84
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT----KCFAPSHIKGQNI 244
G+F +L L +L IS N CDCHLSWL WL+ + C P + G +
Sbjct: 85 KGIFEKL-NLESLSISSNPLKCDCHLSWLPDWLRENVDQVISGPSPPTCVEPEDLAGTPL 143
Query: 245 LDIPEHEFKCS--GSSMETRSKIYR--EECSTDFHPYNSCPVEKPTGECAAEPSCPHPCR 300
+ + F C+ G T SK+ R EE +T + P CP C
Sbjct: 144 ASLARYHFTCNKPGEECGTSSKLTRPTEERTTRW----------PCTATTERSKCPDRCT 193
Query: 301 CADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLE 360
C V C + GL ++P +PE TT+L LE
Sbjct: 194 CESDGVYCSDLGLTEIPENIPENTTKL------------------------------YLE 223
Query: 361 QNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+N I+E+ P+ + +L + L N+I EL AF+ K L+ +
Sbjct: 224 RNQISEIHPERLEHLTKLHTLVLSYNEIRELQENAFSTLKSLKTL 268
>gi|297687134|ref|XP_002821080.1| PREDICTED: slit homolog 1 protein-like, partial [Pongo abelii]
Length = 360
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 111/207 (53%), Gaps = 29/207 (14%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLNNNN+T +P F + +LRTL + W+ GL T + +
Sbjct: 144 TLNNNNITTIPVSSFNHMPKLRTLH----------PVQWM----------GLNTAVLSTA 183
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+ H G + + SCP C C++GIVDCR KGL +P LP
Sbjct: 184 ---------VCVHADVRQGEAGRVPTCTLSSGSCPAMCTCSNGIVDCRGKGLTAIPANLP 234
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
E TE+RLE N I +PP AF+ Y++LRRIDLS NQI+++A DAFQGL+SL SL L N
Sbjct: 235 ETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNK 294
Query: 184 LTYLPDGVFAELFRLRTLRISENSFIC 210
+T LP GVF L+ L+ L ++ N C
Sbjct: 295 ITDLPRGVFGGLYTLQLLLLNANKINC 321
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 115/281 (40%), Gaps = 83/281 (29%)
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL 184
A + L +N I +P KAF L+ + L KNQIS + AF+ L+ L LTLNNNN+
Sbjct: 91 ALGPMDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNI 150
Query: 185 TYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNI 244
T +P F + +LRTL + W +GL T
Sbjct: 151 TTIPVSSFNHMPKLRTLH----------PVQW----------MGLNT------------- 177
Query: 245 LDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADG 304
+ + T ++ + + +C + +G C P C C++G
Sbjct: 178 ------------AVLSTAVCVHADVRQGEAGRVPTCTLS--SGSC------PAMCTCSNG 217
Query: 305 IVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDI 364
IVDCR KGL +P LPE TE+ RLE N I
Sbjct: 218 IVDCRGKGLTAIPANLPETMTEI------------------------------RLELNGI 247
Query: 365 TELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+PP AF+ Y++LRRI L N I E+ P AF + L +
Sbjct: 248 KSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSL 288
>gi|402590231|gb|EJW84162.1| hypothetical protein WUBG_04927, partial [Wuchereria bancrofti]
Length = 986
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 128/275 (46%), Gaps = 30/275 (10%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHL-SWLHRWLKRYPRLGLYTKCFAPS 63
L++N + A+L L+++ + N FIC+CH+ ++H L C P
Sbjct: 167 LSHNQIKCFSVDSLAQLATLKSVSLDGNDFICNCHIVDFVHYLRMNGSHLLNSAVCHEPL 226
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
I G + D H+ G + + CP C+C + +V C K L K P +P
Sbjct: 227 QITGSH--DGISHK----GRIATENVCAEDDNYCPADCKCHETVVRCSNKNLKKFPAGIP 280
Query: 124 EATTELRLEQNDITELPPK-----------------------AFANYKRLRRIDLSKNQI 160
TTEL L+ NDI +PP+ AFAN +L + LS N++
Sbjct: 281 AKTTELLLDSNDIVFIPPELNKLKHLVKLDLSHNRIVSIENEAFANLTKLSTLILSYNKL 340
Query: 161 SKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW 220
+ +AF L SL L+L+ N+++ LP+ FA L + + + NS CDC ++W RW
Sbjct: 341 ECLEEEAFTHLTSLRILSLHGNDISVLPESAFANLHNITHIALGSNSLYCDCRIAWFSRW 400
Query: 221 LKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
+KR +C P +++ Q +L E +FKC+
Sbjct: 401 IKRRFIEAGIARCELPLNLRNQLLLSANELQFKCT 435
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 153/411 (37%), Gaps = 78/411 (18%)
Query: 42 WLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGP---VEKPTGECAAEPSCP 98
WL L + +C +P + + I + +F+C G V G C + CP
Sbjct: 2 WLAHLLAKKAIETSSARCDSPKRVAHRRISTLHHSKFRCKGSEAYVTANAGRCIIDHPCP 61
Query: 99 HPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKN 158
C C + VDC +G P+ LP TTELR+ N I + +++ L + L N
Sbjct: 62 VGCACLNTFVDCSNQGWTDFPLRLPRYTTELRMSNNKIIAIRLSTNLHFENLTILLLDGN 121
Query: 159 QISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF-------------------------A 193
+I + D+ L + L L+ N L + VF A
Sbjct: 122 EIEFIESDSLSALGKVQELDLSRNKLQHFSTKVFGSGNLQITKLNLSHNQIKCFSVDSLA 181
Query: 194 ELFRLRTLRISENSFICDCHL-SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
+L L+++ + N FIC+CH+ ++H L C P I G
Sbjct: 182 QLATLKSVSLDGNDFICNCHIVDFVHYLRMNGSHLLNSAVCHEPLQITG----------- 230
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKG 312
S + + +I E + Y CP C+C + +V C K
Sbjct: 231 --SHDGISHKGRIATENVCAEDDNY-----------------CPADCKCHETVVRCSNKN 271
Query: 313 LNKVPILLPEATTE-----------------LTYMVSIDRVDKVLLYSYISNNFKRWTNR 355
L K P +P TTE L ++V +D + + S + F T
Sbjct: 272 LKKFPAGIPAKTTELLLDSNDIVFIPPELNKLKHLVKLD-LSHNRIVSIENEAFANLTKL 330
Query: 356 SRR-LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
S L N + L +AF + LR + L NDI+ LP AFAN + +
Sbjct: 331 STLILSYNKLECLEEEAFTHLTSLRILSLHGNDISVLPESAFANLHNITHI 381
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L+ N+++ LP+ FA L + + + NS CDC ++W RW+KR +C P
Sbjct: 358 SLHGNDISVLPESAFANLHNITHIALGSNSLYCDCRIAWFSRWIKRRFIEAGIARCELPL 417
Query: 64 HIKGQNILDIPEHEFKCSGPV 84
+++ Q +L E +FKC+ V
Sbjct: 418 NLRNQLLLSANELQFKCTEKV 438
>gi|344258704|gb|EGW14808.1| hypothetical protein I79_024593 [Cricetulus griseus]
Length = 194
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 111/209 (53%), Gaps = 24/209 (11%)
Query: 119 PILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLT 178
PIL+ + + L N I+EL P AF + L + L+ N+I+ + VDAFQ L +L L+
Sbjct: 10 PILVSDCSD---LSNNQISELAPDAFQGLRSLNSLLLNANKINCLRVDAFQDLHNLNLLS 66
Query: 179 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 238
L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 67 LYDNKLQTVAKGTFSALRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRR 126
Query: 239 IKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHP 298
+ + I I +F+CSG+ + RSK+ +G+C A+ +CP
Sbjct: 127 LANKRIGQIKSKKFRCSGTE-DYRSKL--------------------SGDCFADLACPEK 165
Query: 299 CRCADGIVDCREKGLNKVPILLPEATTEL 327
CRC VDC + LNK+P +P+ T EL
Sbjct: 166 CRCEGTTVDCSNQKLNKIPDHIPQYTAEL 194
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 73/129 (56%), Gaps = 3/129 (2%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N L + G F+ L ++T+ +++N FICDCHL WL +L P +C +P
Sbjct: 66 SLYDNKLQTVAKGTFSALRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPR 125
Query: 64 HIKGQNILDIPEHEFKCSGPVE---KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+ + I I +F+CSG + K +G+C A+ +CP CRC VDC + LNK+P
Sbjct: 126 RLANKRIGQIKSKKFRCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPD 185
Query: 121 LLPEATTEL 129
+P+ T EL
Sbjct: 186 HIPQYTAEL 194
>gi|402589124|gb|EJW83056.1| hypothetical protein WUBG_06033, partial [Wuchereria bancrofti]
Length = 151
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 86/149 (57%), Gaps = 2/149 (1%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TLN NNL+ + G + LR LR++EN ++CDC L W+ + + L T C P+
Sbjct: 5 TLNGNNLSTM--GQLGPMPNLRILRLAENPWLCDCRLRWMKKIISNSHLLARNTLCHRPA 62
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
H+ + + +I E KCSG ++ C CP C C + +DCR++GL +P LP
Sbjct: 63 HLHSRMLGNINETLMKCSGIEKRAATSCRDASVCPSVCTCTETTIDCRDRGLTHIPANLP 122
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRR 152
TTELRLEQN IT +PP+AF N +L+R
Sbjct: 123 STTTELRLEQNQITYVPPRAFHNLHQLKR 151
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 89/204 (43%), Gaps = 56/204 (27%)
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAP 236
LTLN NNL+ + G + LR LR++EN ++CDC L W+ + + L T C P
Sbjct: 4 LTLNGNNLSTM--GQLGPMPNLRILRLAENPWLCDCRLRWMKKIISNSHLLARNTLCHRP 61
Query: 237 SHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCP 296
+H+ + + +I E KCSG +E R+ C CP
Sbjct: 62 AHLHSRMLGNINETLMKCSG--IEKRAAT----------------------SCRDASVCP 97
Query: 297 HPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRS 356
C C + +DCR++GL +P LP TTEL
Sbjct: 98 SVCTCTETTIDCRDRGLTHIPANLPSTTTEL----------------------------- 128
Query: 357 RRLEQNDITELPPKAFANYKRLRR 380
RLEQN IT +PP+AF N +L+R
Sbjct: 129 -RLEQNQITYVPPRAFHNLHQLKR 151
>gi|47206436|emb|CAF94128.1| unnamed protein product [Tetraodon nigroviridis]
Length = 872
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 138/332 (41%), Gaps = 81/332 (24%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N LT + G F L L TL + NSF CDC L+WL WL+ + +C P
Sbjct: 173 SLYDNQLTTITPGAFDTLQALSTLNLLANSFNCDCRLAWLGDWLRSRKIVTGNPRCQRPG 232
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLN------- 116
+K + D+ +F+C E+ + C P CP C C + +V C K L+
Sbjct: 233 FLKEIPLQDVALPDFRCDEGQEESS--CVPRPQCPSECTCLETVVRCSNKHLHALPKGIP 290
Query: 117 ----KVPILLPEAT-----------------------TELRLEQ-NDITELP-------- 140
++P+++P A L LE ++ LP
Sbjct: 291 RNVTELPVIVPAAALPHSRSQCSPTTIARERPCSCAQAVLALEALMEVAVLPGGHSGLAV 350
Query: 141 ------------PKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL---- 184
PK + +K L+ +DLS N+I+ + +F + LT+L L+ N+L
Sbjct: 351 SRYLDGNQFSIVPKELSGFKYLQLVDLSNNRINSLTNSSFSNMSQLTTLILSYNSLRCIP 410
Query: 185 --------------------TYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRY 224
+ LPDG+F ++ L L I N CDC L WL W+K
Sbjct: 411 KMAFGGLHSLRLLSLHGNEISELPDGIFNDVTSLSHLAIGANPLYCDCRLRWLSDWVKTG 470
Query: 225 PRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
+ +C P ++G+ +L P +F+C+G
Sbjct: 471 YKEPGIARCAGPQGMEGKLLLTTPAKKFECTG 502
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 152/404 (37%), Gaps = 116/404 (28%)
Query: 91 CAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITEL-PPKAFANYKR 149
C ++P CP CRC +VDC L KVP +P +T+ELRL NDIT L AF + +
Sbjct: 23 CNSDPVCPPKCRCESNVVDCSNLKLTKVPEHIPSSTSELRLNNNDITTLEATGAFKSLSQ 82
Query: 150 LRRI--------------DLSKNQISKVAVDAFQGLKSLTS------------------- 176
L++I +LS N+I+++ AF+G S+
Sbjct: 83 LKKIIRFTLLTQRFSLYSNLSNNKITEIEDGAFEGASSVIELHLTANQIDSVRSGMFRGL 142
Query: 177 -----------------------------LTLNNNNLTYLPDGVFAELFRLRTLRISENS 207
L+L +N LT + G F L L TL + NS
Sbjct: 143 EGLRMMMLRNNKISCVHNDSFTGLHNVRLLSLYDNQLTTITPGAFDTLQALSTLNLLANS 202
Query: 208 FICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYR 267
F CDC L+WL WL+ + +C P +K + D+ +F+C E+
Sbjct: 203 FNCDCRLAWLGDWLRSRKIVTGNPRCQRPGFLKEIPLQDVALPDFRCDEGQEES------ 256
Query: 268 EECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTEL 327
C P CP C C + +V C K L+ +P +P TEL
Sbjct: 257 --------------------SCVPRPQCPSECTCLETVVRCSNKHLHALPKGIPRNVTEL 296
Query: 328 TYMV---------------SIDR-----------VDKVLLYSYISNNFKRWTNRSRRLEQ 361
+V +I R + L+ + SR L+
Sbjct: 297 PVIVPAAALPHSRSQCSPTTIARERPCSCAQAVLALEALMEVAVLPGGHSGLAVSRYLDG 356
Query: 362 NDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N + + PK + +K L+ + L N I L +F+N +L +
Sbjct: 357 NQFS-IVPKELSGFKYLQLVDLSNNRINSLTNSSFSNMSQLTTL 399
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
N ++ LPDG+F ++ L L I N CDC L WL W+K + +C P ++
Sbjct: 427 GNEISELPDGIFNDVTSLSHLAIGANPLYCDCRLRWLSDWVKTGYKEPGIARCAGPQGME 486
Query: 67 GQNILDIPEHEFKCSGPVE 85
G+ +L P +F+C+G V+
Sbjct: 487 GKLLLTTPAKKFECTGDVD 505
>gi|157676779|emb|CAP08024.1| lrrc17 [Danio rerio]
Length = 435
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 122/254 (48%), Gaps = 20/254 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +N L +G+ + +L+ LR+ +N + CDC L L R+++ +G Y +C P
Sbjct: 124 LQHNRLQVASEGMLIPMPQLKYLRLHDNPWRCDCQLDSLVRFIQVPSNRNIGNYARCAEP 183
Query: 63 SHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGI------------VDC 110
G+ + + + E CS EK P P + +D +DC
Sbjct: 184 REFSGRQLKKL-DAEMLCSPEQEKEAILDPENQQLPAPQKKSDATSLCHTYMHPVPRMDC 242
Query: 111 REKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQG 170
R + L VP +P +L L +N I +L K F N K L+ ++LS N + + AF G
Sbjct: 243 RNRDLKTVPADIPLDIVKLDLSRNTIKQLRQKEFVNVKELKLLNLSGNSLESIDTAAFTG 302
Query: 171 LKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL--- 227
L L L L+NN+L Y GV +L+ L+ L + +N +ICD ++ +L WLK +P +
Sbjct: 303 LLYLGELDLSNNSLRYFQYGVLEDLYFLKRLSLGDNPWICDYNIHYLIYWLKHHPDVSHT 362
Query: 228 GLYTKCFAPSHIKG 241
GL C P +G
Sbjct: 363 GLV--CSEPEEFRG 374
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 127/305 (41%), Gaps = 45/305 (14%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
C + DC+E+ L V + PE L L +N I L F++++ L+ +DL
Sbjct: 41 DCKETLVNGEKYFDCQERHLTAVLLGWPEDIHHLLLARNRIQVLRDNTFSHFRNLKSLDL 100
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLS 215
+N+IS++ AF GL LT+L L +N L +G+ + +L+ LR+ +N + CDC L
Sbjct: 101 QQNEISRIDDGAFDGLSKLTTLLLQHNRLQVASEGMLIPMPQLKYLRLHDNPWRCDCQLD 160
Query: 216 WLHRWLK--RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTD 273
L R+++ +G Y +C P G+ + + + E CS +E
Sbjct: 161 SLVRFIQVPSNRNIGNYARCAEPREFSGRQLKKL-DAEMLCSPE----------QEKEAI 209
Query: 274 FHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSI 333
P N + P + A C H +DCR + L VP +P + I
Sbjct: 210 LDPENQ-QLPAPQKKSDATSLC-HTYMHPVPRMDCRNRDLKTVPADIP---------LDI 258
Query: 334 DRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPP 393
++D L +N I +L K F N K L+ + L N + +
Sbjct: 259 VKLD---------------------LSRNTIKQLRQKEFVNVKELKLLNLSGNSLESIDT 297
Query: 394 KAFAN 398
AF
Sbjct: 298 AAFTG 302
>gi|45387525|ref|NP_991102.1| leucine-rich repeat-containing protein 17 precursor [Danio rerio]
gi|41351171|gb|AAH65605.1| Leucine rich repeat containing 17 [Danio rerio]
Length = 420
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 122/254 (48%), Gaps = 20/254 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +N L +G+ + +L+ LR+ +N + CDC L L R+++ +G Y +C P
Sbjct: 124 LQHNRLQVASEGMLIPMPQLKYLRLHDNPWRCDCQLDSLVRFIQVPSNRNIGNYARCAEP 183
Query: 63 SHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGI------------VDC 110
G+ + + + E CS EK P P + +D +DC
Sbjct: 184 REFSGRQLKKL-DAEMLCSPEQEKEAILDPENQQLPAPQKKSDATSLCHTYMHPVPRMDC 242
Query: 111 REKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQG 170
R + L VP +P +L L +N I +L K F N K L+ ++LS N + + AF G
Sbjct: 243 RNRDLKTVPADIPLDIVKLDLSRNTIKQLRQKEFVNVKELKLLNLSGNSLESIDTAAFTG 302
Query: 171 LKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL--- 227
L L L L+NN+L Y GV +L+ L+ L + +N +ICD ++ +L WLK +P +
Sbjct: 303 LLYLGELDLSNNSLRYFQYGVLEDLYFLKRLSLGDNPWICDYNIHYLIYWLKHHPDVSHT 362
Query: 228 GLYTKCFAPSHIKG 241
GL C P +G
Sbjct: 363 GLV--CSEPEEFRG 374
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 127/305 (41%), Gaps = 45/305 (14%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
C + DC+E+ L V + PE L L +N I L F++++ L+ +DL
Sbjct: 41 DCKETLVNGEKYFDCQERHLTAVLLGWPEDIHHLLLARNRIQVLRDNTFSHFRNLKSLDL 100
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLS 215
+N+IS++ AF GL LT+L L +N L +G+ + +L+ LR+ +N + CDC L
Sbjct: 101 QQNEISRIDDGAFDGLSKLTTLLLQHNRLQVASEGMLIPMPQLKYLRLHDNPWRCDCQLD 160
Query: 216 WLHRWLK--RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTD 273
L R+++ +G Y +C P G+ + + + E CS +E
Sbjct: 161 SLVRFIQVPSNRNIGNYARCAEPREFSGRQLKKL-DAEMLCSPE----------QEKEAI 209
Query: 274 FHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSI 333
P N + P + A C H +DCR + L VP +P + I
Sbjct: 210 LDPENQ-QLPAPQKKSDATSLC-HTYMHPVPRMDCRNRDLKTVPADIP---------LDI 258
Query: 334 DRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPP 393
++D L +N I +L K F N K L+ + L N + +
Sbjct: 259 VKLD---------------------LSRNTIKQLRQKEFVNVKELKLLNLSGNSLESIDT 297
Query: 394 KAFAN 398
AF
Sbjct: 298 AAFTG 302
>gi|313242134|emb|CBY34307.1| unnamed protein product [Oikopleura dioica]
Length = 1134
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 124/272 (45%), Gaps = 33/272 (12%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT--KCFAP 62
L NNL + DG +L L I N C+C ++++ + ++ KC P
Sbjct: 199 LYENNLQEIGDGTLQQLSTLEYFNILNNPVNCNCLFQSTAKYMQSMQKQIAFSSPKCNEP 258
Query: 63 SHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADG--IVDCREKGLNKVPI 120
+++G ILDIP + KC+ P E +C CP C C + IVDC L + +
Sbjct: 259 QYLEGFYILDIPLSDLKCA-PGETDHVKCQTGSKCPRKCHCNEKTKIVDCSNLQLTTIEL 317
Query: 121 -LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVA--------------- 164
++P T EL L+ N I LP +K L +DLS N+I ++
Sbjct: 318 EMIPTETKELLLKNNQIESLPE--LHRFKELELLDLSSNRIRGISPNTFSLPKLKFLMLA 375
Query: 165 --------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAE--LFRLRTLRISENSFICDCHL 214
++F GL +L LTLN N + +P+ F L + + +S+N CDC L
Sbjct: 376 GNRIGCLIENSFAGLPNLNMLTLNENRIKKIPESAFPAQVLNSIDRISLSDNELDCDCKL 435
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILD 246
WL RW+++ +C +PS +KG +LD
Sbjct: 436 EWLARWIQQEHTETGEAECASPSKLKGLTLLD 467
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 101/435 (23%), Positives = 157/435 (36%), Gaps = 96/435 (22%)
Query: 31 ENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGPVEKPTGE 90
+N + CDC L WL + L KC P + G + ++ + + KCS E
Sbjct: 4 DNPWNCDCQLKWLADYFDSSRTRALRAKCAGPGNKAGTLLQNLNKSDLKCSRYEEHSVST 63
Query: 91 CAAEPSCPHPCRCA--DGIVDCREKGLNKVPILLPEATTE-------------------- 128
C + CP C C G V C + + V P T
Sbjct: 64 C--DVKCPRGCSCDARSGGVRCIGQNWSSVNFPFPSFMTSLDLSNNKLRELPKSLSRYAL 121
Query: 129 -------------------------LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKV 163
L+L+ N+I LP AF+ L+ + L N+IS +
Sbjct: 122 KELILINNQLELSVDMFKEFKMLEILKLDGNNIESLPQFAFSGLTNLKELSLRNNEISCI 181
Query: 164 AVDAFQ--GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL 221
A D F + L+ L L NNL + DG +L L I N C+C +++
Sbjct: 182 ANDTFTPFDMHKLSRLDLYENNLQEIGDGTLQQLSTLEYFNILNNPVNCNCLFQSTAKYM 241
Query: 222 KRYPRLGLYT--KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
+ + ++ KC P +++G ILDIP + KC+
Sbjct: 242 QSMQKQIAFSSPKCNEPQYLEGFYILDIPLSDLKCA------------------------ 277
Query: 280 CPVEKPTGECAAEPSCPHPCRCAD--GIVDCREKGLNKVPI-LLPEATTELTY------- 329
P E +C CP C C + IVDC L + + ++P T EL
Sbjct: 278 -PGETDHVKCQTGSKCPRKCHCNEKTKIVDCSNLQLTTIELEMIPTETKELLLKNNQIES 336
Query: 330 MVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQ--------NDITELPPKAFANYKRLRRI 381
+ + R ++ L SN + + + L + N I L +FA L +
Sbjct: 337 LPELHRFKELELLDLSSNRIRGISPNTFSLPKLKFLMLAGNRIGCLIENSFAGLPNLNML 396
Query: 382 RLEQNDITELPPKAF 396
L +N I ++P AF
Sbjct: 397 TLNENRIKKIPESAF 411
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 80/203 (39%), Gaps = 37/203 (18%)
Query: 205 ENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSK 264
+N + CDC L WL + L KC P + G + ++ + + KCS
Sbjct: 4 DNPWNCDCQLKWLADYFDSSRTRALRAKCAGPGNKAGTLLQNLNKSDLKCSR-------- 55
Query: 265 IYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCA--DGIVDCREKGLNKVPILLPE 322
Y E H ++C V+ CP C C G V C + + V P
Sbjct: 56 -YEE------HSVSTCDVK-----------CPRGCSCDARSGGVRCIGQNWSSVNFPFP- 96
Query: 323 ATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIR 382
++M S+D + L + + R+ + L N + EL F +K L ++
Sbjct: 97 -----SFMTSLDLSNNKL--RELPKSLSRYALKELILINNQL-ELSVDMFKEFKMLEILK 148
Query: 383 LEQNDITELPPKAFANYKRLRRM 405
L+ N+I LP AF+ L+ +
Sbjct: 149 LDGNNIESLPQFAFSGLTNLKEL 171
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 4 TLNNNNLTYLPDGVFAE--LFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFA 61
TLN N + +P+ F L + + +S+N CDC L WL RW+++ +C +
Sbjct: 397 TLNENRIKKIPESAFPAQVLNSIDRISLSDNELDCDCKLEWLARWIQQEHTETGEAECAS 456
Query: 62 PSHIKGQNILD 72
PS +KG +LD
Sbjct: 457 PSKLKGLTLLD 467
>gi|360043467|emb|CCD78880.1| axon guidance protein [Schistosoma mansoni]
Length = 1419
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 126/295 (42%), Gaps = 46/295 (15%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTK----CF 60
LNNN L + G+F EL L +L +S N F CDCHLSWL WL+ C
Sbjct: 341 LNNNKLRCIAKGIFTEL-NLESLSLSANPFKCDCHLSWLPDWLRNNANQINEGPSPPICI 399
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEK--------------PTGECAAEPSCPHPCRCADG 106
+P + G + + + F C V T E S + G
Sbjct: 400 SPEDLAGTPVASLSRYHFICKNSVSNCLSTNENLHLNEKLNTNENGIVQSVQNVYCDTTG 459
Query: 107 IVDCRE---KGLNKVPILLPEATTELRLEQNDIT------------------------EL 139
C E + L ++P+ + TT+L LE+N IT EL
Sbjct: 460 TSCCEEIADRNLTEIPVNISPETTQLYLERNQITKIDSNRIAHLKKLQTLVLSYNKLREL 519
Query: 140 PPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLR 199
PP+ F L+ I LS N + + +AF GL +L L L NN++ +P G F +L +L
Sbjct: 520 PPRVFEKLSNLKTIVLSYNNLQCIHPEAFHGLSNLRVLILQGNNISSIPQGTFNDLGQLN 579
Query: 200 TLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
L + +N CDC WL+ + ++ + C +PS+++ ++I +F C
Sbjct: 580 NLALGQNPLHCDCTTKWLNGFFRQNFLDNGISLCHSPSNMRLKSIYHSKPTDFIC 634
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 116/464 (25%), Positives = 182/464 (39%), Gaps = 84/464 (18%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLS-WLHRWLKRYPRLGL-YTKCFAPSH 64
NN ++Y+ F L L +L + N ICDC L+ WL +L G + +C P +
Sbjct: 113 NNRISYIHPQAFNNLHELSSLYLVHNPLICDCQLAAWLPVFLIEKEAGGTQWVRCAEPLN 172
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAE---PSCPHPCRCADGI-------------- 107
++G ++ ++ H C + + E CP CRC D I
Sbjct: 173 VQGHHVRELLPHILDCPSNINYKEENHSCEFHDYQCPDGCRCKDIIIKPRMHANSEAIFR 232
Query: 108 ------------VDCREKGLNKVPILLPEATTELRLEQNDITELP-PKAFANYKRLRRID 154
VDC L ++P LP T EL L N I + + K L +
Sbjct: 233 QDEFGSILGGLSVDCSSLELTEIPDNLPINTKELILRNNLIKSITIESGLSKLKSLETLI 292
Query: 155 LSKNQISKVAVDAFQGLKS------------------------LTSLTLNNNNLTYLPDG 190
LS N ++ + F GLK+ L L LNNN L + G
Sbjct: 293 LSNNSLTYLEEKTFNGLKNIEILLLQHNQIKCLNNRTFHQTPVLKILMLNNNKLRCIAKG 352
Query: 191 VFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTK----CFAPSHIKGQNILD 246
+F EL L +L +S N F CDCHLSWL WL+ C +P + G +
Sbjct: 353 IFTEL-NLESLSLSANPFKCDCHLSWLPDWLRNNANQINEGPSPPICISPEDLAGTPVAS 411
Query: 247 IPEHEFKCSGS---SMETRSKIY-REECSTDFHPYNSCPVEKPTGECAAEPSCPHP-CRC 301
+ + F C S + T ++ E+ +T+ E + C C
Sbjct: 412 LSRYHFICKNSVSNCLSTNENLHLNEKLNTN---------ENGIVQSVQNVYCDTTGTSC 462
Query: 302 ADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQ 361
+ I D + L ++P+ + TT+L ++R + S + K+ ++ L
Sbjct: 463 CEEIAD---RNLTEIPVNISPETTQLY----LERNQITKIDSNRIAHLKKL--QTLVLSY 513
Query: 362 NDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N + ELPP+ F L+ I L N++ + P+AF LR +
Sbjct: 514 NKLRELPPRVFEKLSNLKTIVLSYNNLQCIHPEAFHGLSNLRVL 557
>gi|256074047|ref|XP_002573338.1| axon guidance protein; slit [Schistosoma mansoni]
Length = 1419
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 126/295 (42%), Gaps = 46/295 (15%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTK----CF 60
LNNN L + G+F EL L +L +S N F CDCHLSWL WL+ C
Sbjct: 341 LNNNKLRCIAKGIFTEL-NLESLSLSANPFKCDCHLSWLPDWLRNNANQINEGPSPPICI 399
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEK--------------PTGECAAEPSCPHPCRCADG 106
+P + G + + + F C V T E S + G
Sbjct: 400 SPEDLAGTPVASLSRYHFICKNSVSNCLSTNENLHLNEKLNTNENGIVQSVQNVYCDTTG 459
Query: 107 IVDCRE---KGLNKVPILLPEATTELRLEQNDIT------------------------EL 139
C E + L ++P+ + TT+L LE+N IT EL
Sbjct: 460 TSCCEEIADRNLTEIPVNISPETTQLYLERNQITKIDSNRIAHLKKLQTLVLSYNKLREL 519
Query: 140 PPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLR 199
PP+ F L+ I LS N + + +AF GL +L L L NN++ +P G F +L +L
Sbjct: 520 PPRVFEKLANLKTIVLSYNNLQCIHPEAFHGLSNLRVLILQGNNISSIPQGTFNDLGQLN 579
Query: 200 TLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
L + +N CDC WL+ + ++ + C +PS+++ ++I +F C
Sbjct: 580 NLALGQNPLHCDCTTKWLNGFFRQNFLDNGISLCHSPSNMRLKSIYHSKPTDFIC 634
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 116/464 (25%), Positives = 182/464 (39%), Gaps = 84/464 (18%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLS-WLHRWLKRYPRLGL-YTKCFAPSH 64
NN ++Y+ F L L +L + N ICDC L+ WL +L G + +C P +
Sbjct: 113 NNRISYIHPQAFNNLHELSSLYLVHNPLICDCQLAAWLPVFLIEKEAGGTQWVRCAEPLN 172
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAE---PSCPHPCRCADGI-------------- 107
++G ++ ++ H C + + E CP CRC D I
Sbjct: 173 VQGHHVRELLPHILDCPSNINYKEENHSCEFHDYQCPDGCRCKDIIIKPRMHANSEAIFR 232
Query: 108 ------------VDCREKGLNKVPILLPEATTELRLEQNDITELP-PKAFANYKRLRRID 154
VDC L ++P LP T EL L N I + + K L +
Sbjct: 233 QDEFGSILGGLSVDCSSLELTEIPDNLPINTKELILRNNLIKSITIESGLSKLKSLETLI 292
Query: 155 LSKNQISKVAVDAFQGLKS------------------------LTSLTLNNNNLTYLPDG 190
LS N ++ + F GLK+ L L LNNN L + G
Sbjct: 293 LSNNSLTYLEEKTFNGLKNIEILLLQHNQIKCLNNRTFHQTPVLKILMLNNNKLRCIAKG 352
Query: 191 VFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTK----CFAPSHIKGQNILD 246
+F EL L +L +S N F CDCHLSWL WL+ C +P + G +
Sbjct: 353 IFTEL-NLESLSLSANPFKCDCHLSWLPDWLRNNANQINEGPSPPICISPEDLAGTPVAS 411
Query: 247 IPEHEFKCSGS---SMETRSKIY-REECSTDFHPYNSCPVEKPTGECAAEPSCPHP-CRC 301
+ + F C S + T ++ E+ +T+ E + C C
Sbjct: 412 LSRYHFICKNSVSNCLSTNENLHLNEKLNTN---------ENGIVQSVQNVYCDTTGTSC 462
Query: 302 ADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQ 361
+ I D + L ++P+ + TT+L ++R + S + K+ ++ L
Sbjct: 463 CEEIAD---RNLTEIPVNISPETTQLY----LERNQITKIDSNRIAHLKKL--QTLVLSY 513
Query: 362 NDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N + ELPP+ F L+ I L N++ + P+AF LR +
Sbjct: 514 NKLRELPPRVFEKLANLKTIVLSYNNLQCIHPEAFHGLSNLRVL 557
>gi|260810879|ref|XP_002600150.1| hypothetical protein BRAFLDRAFT_66658 [Branchiostoma floridae]
gi|229285436|gb|EEN56162.1| hypothetical protein BRAFLDRAFT_66658 [Branchiostoma floridae]
Length = 473
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 109/213 (51%), Gaps = 13/213 (6%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK------RYPRLGLYTK 58
L++N++T+ P L L + + N + CDC L+ L +L R+ G+ T
Sbjct: 154 LHHNHITHTPGDELQSLGHLEAVTLHGNDWKCDCELADLTTFLGENTGKLRFDS-GVPTP 212
Query: 59 ---CFAPSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL 115
C P H+ G+ I + + P E+ G A + +CP PC C VDC +KGL
Sbjct: 213 PAICARPQHLMGEQIHTLSRDDL--CMPREETPGP-AGDKTCPAPCSCRGAEVDCDQKGL 269
Query: 116 NKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLT 175
VP +P TTEL L N+I ++PP A + K+L+ + LS NQ+ V DA + L L+
Sbjct: 270 TSVPPGIPSPTTELVLSNNNIRDIPPDALVHLKKLQTLMLSNNQLQAVPKDALKKLPELS 329
Query: 176 SLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
L L+ N+++ + +G F L LR L +S N
Sbjct: 330 VLYLDGNDISKIAEGTFDTLTTLRVLSLSNNKI 362
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 129/364 (35%), Gaps = 115/364 (31%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATT------------------------ELRL 131
+CP C C V C + L+ +P +P T +LRL
Sbjct: 23 ACPSRCTCELSEVYCSRRQLSDIPSGVPPKTELLDLSQNQLRRIPRKGFKDLKYLRQLRL 82
Query: 132 EQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGV 191
+ N I +L AF + L+R+ L N+I ++ F G+ L SL L++N++ + GV
Sbjct: 83 DDNHIEKLEDGAFDGLENLQRLWLLDNRIRSLSAGVFIGMPQLWSLKLDSNDIKDISPGV 142
Query: 192 FAELFRLRTLRISENSFI------------------------CDCHLSWLHRWLK----- 222
F L LR L + N CDC L+ L +L
Sbjct: 143 FKPLSNLRWLHLHHNHITHTPGDELQSLGHLEAVTLHGNDWKCDCELADLTTFLGENTGK 202
Query: 223 -RYPRLGLYTK---CFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYN 278
R+ G+ T C P H+ G+ I + +
Sbjct: 203 LRFDS-GVPTPPAICARPQHLMGEQIHTLSRDDL-------------------------- 235
Query: 279 SCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDK 338
C + T A + +CP PC C VDC +KGL VP +P TTEL
Sbjct: 236 -CMPREETPGPAGDKTCPAPCSCRGAEVDCDQKGLTSVPPGIPSPTTELV---------- 284
Query: 339 VLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFAN 398
L N+I ++PP A + K+L+ + L N + +P A
Sbjct: 285 --------------------LSNNNIRDIPPDALVHLKKLQTLMLSNNQLQAVPKDALKK 324
Query: 399 YKRL 402
L
Sbjct: 325 LPEL 328
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 44/112 (39%), Gaps = 30/112 (26%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C V C + L+ +P +P T L
Sbjct: 23 ACPSRCTCELSEVYCSRRQLSDIPSGVPPKTELLD------------------------- 57
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L QN + +P K F + K LR++RL+ N I +L AF + L+R+
Sbjct: 58 -----LSQNQLRRIPRKGFKDLKYLRQLRLDDNHIEKLEDGAFDGLENLQRL 104
>gi|390370485|ref|XP_001197890.2| PREDICTED: slit homolog 2 protein-like, partial [Strongylocentrotus
purpuratus]
Length = 281
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 118/279 (42%), Gaps = 53/279 (18%)
Query: 29 ISENSFICDCHLSWLHRWLKRYPRLGLY-TKCFAPSHIKGQNILDIPEHEFKCSGPVEKP 87
++ N FICDC+L W+ +L+ P + +C P ++ + I ++ +FKC
Sbjct: 2 LARNPFICDCNLRWIAEYLESNPVVETSGARCARPVRMERKRITNMKSVKFKCKDAEYYR 61
Query: 88 T---GECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKA- 143
T G+C + CP C C + IVDC +GL VP +P TTEL+L N+I+ +
Sbjct: 62 TAQAGQCFIDHDCPDACTCHESIVDCSNRGLPTVPDEIPTYTTELKLNGNEISRISADGK 121
Query: 144 FANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRI 203
F + L+ +DL N+IS + +AFQG SL L L NN L+ + F L LRTL +
Sbjct: 122 FLHLPNLKILDLRDNRISVIEDEAFQGASSLVELMLTNNKLSNVTGRSFVGLKNLRTLML 181
Query: 204 SENSFI------------------------------------------------CDCHLS 215
N C+CHLS
Sbjct: 182 RSNRLSCITNETFTGLKAVRLLSLYDNAISTIMPGSLDSMKALATLNLLGNPLNCNCHLS 241
Query: 216 WLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
WL +L + +C PS ++ I + +F C
Sbjct: 242 WLPDYLSARLIITGEPRCQEPSTLQDTPIQTLQRDQFTC 280
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 89/205 (43%), Gaps = 29/205 (14%)
Query: 203 ISENSFICDCHLSWLHRWLKRYPRLGLY-TKCFAPSHIKGQNILDIPEHEFKCSGSSMET 261
++ N FICDC+L W+ +L+ P + +C P ++ + I ++ +FKC +
Sbjct: 2 LARNPFICDCNLRWIAEYLESNPVVETSGARCARPVRMERKRITNMKSVKFKCKDA---- 57
Query: 262 RSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 321
+ YR G+C + CP C C + IVDC +GL VP +P
Sbjct: 58 --EYYRT---------------AQAGQCFIDHDCPDACTCHESIVDCSNRGLPTVPDEIP 100
Query: 322 EATTELTYMVS-IDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRR 380
TTEL + I R+ + ++ N + L N I+ + +AF L
Sbjct: 101 TYTTELKLNGNEISRISADGKFLHLPN------LKILDLRDNRISVIEDEAFQGASSLVE 154
Query: 381 IRLEQNDITELPPKAFANYKRLRRM 405
+ L N ++ + ++F K LR +
Sbjct: 155 LMLTNNKLSNVTGRSFVGLKNLRTL 179
Score = 37.7 bits (86), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 36/77 (46%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N ++ + G + L TL + N C+CHLSWL +L + +C PS
Sbjct: 204 SLYDNAISTIMPGSLDSMKALATLNLLGNPLNCNCHLSWLPDYLSARLIITGEPRCQEPS 263
Query: 64 HIKGQNILDIPEHEFKC 80
++ I + +F C
Sbjct: 264 TLQDTPIQTLQRDQFTC 280
>gi|56554372|pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 92/189 (48%), Gaps = 25/189 (13%)
Query: 97 CPHPCRCADGIVDCREKGLNKVPILLPEATTEL-------------------------RL 131
CP C C VDC +GL ++P +P TTEL L
Sbjct: 2 CPAMCHCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLEL 61
Query: 132 EQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGV 191
++N +T + P AF ++ + L +N+I +++ F GL L +L L +N ++ + G
Sbjct: 62 KRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGS 121
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
F L L +L ++ N F C+CHL+W WL++ G +C APS ++ I D+P E
Sbjct: 122 FEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPSKVRDVQIKDLPHSE 181
Query: 252 FKCSGSSME 260
FKCS + E
Sbjct: 182 FKCSSENSE 190
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 3 RTLN--NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCF 60
+TLN +N ++ + G F L L +L ++ N F C+CHL+W WL++ G +C
Sbjct: 105 KTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCG 164
Query: 61 APSHIKGQNILDIPEHEFKCS 81
APS ++ I D+P EFKCS
Sbjct: 165 APSKVRDVQIKDLPHSEFKCS 185
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 295 CPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRWT 353
CP C C VDC +GL ++P +P TTEL + + R+ L+ + + K
Sbjct: 2 CPAMCHCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVK--- 58
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L++N +T + P AF ++ ++L +N I E+ K F +L+ +
Sbjct: 59 ---LELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTL 107
>gi|410918965|ref|XP_003972955.1| PREDICTED: leucine-rich repeat-containing protein 17-like [Takifugu
rubripes]
Length = 437
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 122/252 (48%), Gaps = 16/252 (6%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAPSH 64
+N L + + + RL LRI +N + CDC L L R ++ LG Y KC P
Sbjct: 128 HNGLRTASEEILLPMRRLTYLRIYDNPWTCDCSLDSLVRTMQLPSNRNLGNYAKCAGPLS 187
Query: 65 IKGQNILDIPEHEFKCS----GPV-EKPTGECAAEPSCPHPCRC---ADGIVDCREKGLN 116
++G + + E C+ G V +P + +P CR ++DC K LN
Sbjct: 188 MRGHKLKKM-NVELLCAPDRDGEVPSRP--QIKVKPEVTSICRTYMFPKPLLDCSNKDLN 244
Query: 117 KVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
VP LP ++ L N I L P+ F K L+ ++LS+N + ++ + AF GL L
Sbjct: 245 HVPSGLPIDIVKMDLSGNSIRHLKPQQFLTCKDLKLLNLSRNSLQQIEMAAFAGLLYLRE 304
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTK--CF 234
L L+NN+L GV +L+ LR L + N ++CD ++ +L WLK +P + YT C
Sbjct: 305 LDLSNNSLHNFQYGVLEDLYFLRKLSLGNNPWVCDYNIHYLIYWLKHHPGVQ-YTGLICA 363
Query: 235 APSHIKGQNILD 246
P +G + D
Sbjct: 364 EPEEFRGWRVED 375
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 125/315 (39%), Gaps = 59/315 (18%)
Query: 97 CPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLS 156
C + +DC+++ L V P L L +N I L F+ + +L+ +DL
Sbjct: 44 CKEYIEAGEKYLDCQDQQLTTVMQDWPTDIQHLLLARNKIQVLRDNMFSQFTQLKSLDLQ 103
Query: 157 KNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSW 216
+N IS V AF GL LT+L L +N L + + + RL LRI +N + CDC L
Sbjct: 104 QNDISMVEDGAFAGLTQLTTLLLQHNGLRTASEEILLPMRRLTYLRIYDNPWTCDCSLDS 163
Query: 217 LHRWLK--RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDF 274
L R ++ LG Y KC P ++G H+ K + C+ D
Sbjct: 164 LVRTMQLPSNRNLGNYAKCAGPLSMRG--------HKLKKMNVEL---------LCAPDR 206
Query: 275 HPYNSCPVEKPTG-ECAAEPSCPHPCRC---ADGIVDCREKGLNKVPILLPEATTELTYM 330
E P+ + +P CR ++DC K LN VP LP
Sbjct: 207 DG------EVPSRPQIKVKPEVTSICRTYMFPKPLLDCSNKDLNHVPSGLP--------- 251
Query: 331 VSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITE 390
+ I ++D L N I L P+ F K L+ + L +N + +
Sbjct: 252 IDIVKMD---------------------LSGNSIRHLKPQQFLTCKDLKLLNLSRNSLQQ 290
Query: 391 LPPKAFANYKRLRRM 405
+ AFA LR +
Sbjct: 291 IEMAAFAGLLYLREL 305
>gi|227343669|pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
gi|227343670|pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 88/182 (48%), Gaps = 25/182 (13%)
Query: 97 CPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLS 156
CP C C D +V C KGL +P +P TEL L+ N T L PK +NYK L IDLS
Sbjct: 4 CPTECTCLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLS 62
Query: 157 KNQISKVAVDAFQ------------------------GLKSLTSLTLNNNNLTYLPDGVF 192
N+IS ++ +F GLKSL L+L+ N+++ +P+G F
Sbjct: 63 NNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAF 122
Query: 193 AELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
+L L L I N CDC++ WL W+K + +C P + + +L P +F
Sbjct: 123 NDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEMADKLLLTTPSKKF 182
Query: 253 KC 254
C
Sbjct: 183 TC 184
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L+ N+++ +P+G F +L L L I N CDC++ WL W+K + +C P
Sbjct: 108 SLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPG 167
Query: 64 HIKGQNILDIPEHEFKC 80
+ + +L P +F C
Sbjct: 168 EMADKLLLTTPSKKFTC 184
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
Query: 295 CPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN 354
CP C C D +V C KGL +P +P TEL +D L+ +S N+K T
Sbjct: 4 CPTECTCLDTVVRCSNKGLKVLPKGIPRDVTELY----LDGNQFTLVPKELS-NYKHLT- 57
Query: 355 RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N I+ L ++F+N +L + L N + +PP+ F K LR +
Sbjct: 58 -LIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 107
>gi|126340414|ref|XP_001364735.1| PREDICTED: leucine-rich repeat-containing protein 17 [Monodelphis
domestica]
Length = 441
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 141/307 (45%), Gaps = 39/307 (12%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +N L L + VF L LR+ +N + C C + L L+ R LG Y KC +P
Sbjct: 136 LQHNQLKVLTEEVFIYTPLLSYLRLYDNPWHCTCEMDTLISMLQIPRNRNLGNYAKCESP 195
Query: 63 SHIKGQNILDIPEHEFKCSGPVEK---PTGECAAEPSCPHPCRCADGIV----------- 108
+K Q + I + + C+ ++ PT + + P+ P AD +
Sbjct: 196 QELKNQKLKQI-KSDLLCNEDEKEHVAPTTQVSGRPTVVKPE--ADSTLCHIYVFPIQTL 252
Query: 109 DCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAF 168
DC+ K L K+P +P +L L N I +L PK F + LR+++LS N I + AF
Sbjct: 253 DCKRKELRKIPNNIPPDIIKLDLSNNKINQLRPKEFEDVHELRKLNLSSNGIEFIDPAAF 312
Query: 169 QGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL- 227
GL +L L L+NN+L GV +L+ L+ L + EN + CD ++ +L+ WLK + +
Sbjct: 313 SGLTNLEELDLSNNSLQNFDYGVLEDLYFLKILWLKENPWRCDYNIHYLYYWLKHHYNVH 372
Query: 228 --GLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKP 285
GL +C P KG + G + + Y EEC D P P ++
Sbjct: 373 YNGL--ECRMPEEYKGWLV-----------GKYVRS----YYEECPKDKLPSYPDPTDQD 415
Query: 286 TGECAAE 292
T + E
Sbjct: 416 TEDDTWE 422
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 124/300 (41%), Gaps = 45/300 (15%)
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
+DC+E+ L PE + L +N I L F+ +K+L+ +DL +N ISK+ +A
Sbjct: 65 LDCQERKLVYTLPGWPEDLLHMLLARNRIRILKNNMFSKFKKLKSLDLQQNDISKIESEA 124
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYP 225
F GL LT+L L +N L L + VF L LR+ +N + C C + L L+ R
Sbjct: 125 FFGLNRLTTLLLQHNQLKVLTEEVFIYTPLLSYLRLYDNPWHCTCEMDTLISMLQIPRNR 184
Query: 226 RLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKP 285
LG Y KC +P +K Q + I + + C+ +E + V KP
Sbjct: 185 NLGNYAKCESPQELKNQKLKQI-KSDLLCNEDE--------KEHVAPTTQVSGRPTVVKP 235
Query: 286 TGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYI 345
A+ + H +DC+ K L K+P +P +L
Sbjct: 236 ----EADSTLCHIYVFPIQTLDCKRKELRKIPNNIPPDIIKLD----------------- 274
Query: 346 SNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N I +L PK F + LR++ L N I + P AF+ L +
Sbjct: 275 -------------LSNNKINQLRPKEFEDVHELRKLNLSSNGIEFIDPAAFSGLTNLEEL 321
>gi|291391261|ref|XP_002712068.1| PREDICTED: slit homolog 1 protein-like [Oryctolagus cuniculus]
Length = 442
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 121/252 (48%), Gaps = 16/252 (6%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +N + L + VF L LR+ +N + C C + L L+ R LG Y KC +P
Sbjct: 137 LQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCEIETLVSMLQIPRNRNLGNYAKCESP 196
Query: 63 SHIKGQNILDIPEHEFKCSGPVEK--PTGECAAEPSCPHP----CRCADGI-----VDCR 111
+K + +L I + E+ P + A P P C + + +DC+
Sbjct: 197 QELKNKKLLQIRSEQLCDEEEKEQLDPKSQVAGRPLVTKPEVDSTLCHNYVFPIQTLDCK 256
Query: 112 EKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
K L KVP +P +L L N I +L PK F + L++++LS N I + AF GL
Sbjct: 257 RKELKKVPNNIPPDIVKLDLSYNKIKQLRPKEFEDVHELKKLNLSSNGIEFIDPAAFLGL 316
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
L L L+NNNL GV +L+ L+ L + +N + CD ++ +L+ WLK + + LY
Sbjct: 317 THLEELDLSNNNLQNFDYGVLEDLYFLKLLWLGDNPWRCDYNIHYLYYWLKHHYNV-LYN 375
Query: 232 --KCFAPSHIKG 241
+C P KG
Sbjct: 376 GLECKTPEEYKG 387
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 122/300 (40%), Gaps = 45/300 (15%)
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
+DC+E+ L V P+ + L +N I L F+ +++LR +DL +N+ISK+ +A
Sbjct: 66 LDCQERKLVYVLPGWPQDLLHMLLARNKIRVLKNNMFSKFRKLRSLDLQQNEISKIESEA 125
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYP 225
F GL LT+L L +N + L + VF L LR+ +N + C C + L L+ R
Sbjct: 126 FFGLNKLTTLLLQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCEIETLVSMLQIPRNR 185
Query: 226 RLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKP 285
LG Y KC +P +K + +L I + C EE P +
Sbjct: 186 NLGNYAKCESPQELKNKKLLQIRSEQL-CD------------EEEKEQLDPKSQVAGRPL 232
Query: 286 TGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYI 345
+ + + H +DC+ K L KVP +P +L
Sbjct: 233 VTKPEVDSTLCHNYVFPIQTLDCKRKELKKVPNNIPPDIVKLD----------------- 275
Query: 346 SNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N I +L PK F + L+++ L N I + P AF L +
Sbjct: 276 -------------LSYNKIKQLRPKEFEDVHELKKLNLSSNGIEFIDPAAFLGLTHLEEL 322
>gi|47222067|emb|CAG12093.1| unnamed protein product [Tetraodon nigroviridis]
Length = 389
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 125/279 (44%), Gaps = 42/279 (15%)
Query: 5 LNNNNLTYLPDGVFAE------------------------LFRLRTLRISENSFICDCHL 40
L N+++ L DG FA + RL LR+ +N + CDC L
Sbjct: 102 LQQNDISMLEDGAFAGLTQLTTLLLQHNGLRTASEEMLLPMHRLSYLRVYDNPWNCDCAL 161
Query: 41 SWLHRWLK--RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS----GPV-EKPTGECAA 93
L R ++ LG Y KC P ++G + I E C+ G V +P +
Sbjct: 162 DSLVRTMQLPSNRNLGNYAKCAEPLSMRGYKMRKI-NVELLCAPDRDGEVPSRP--QIKV 218
Query: 94 EPSCPHPCRCA---DGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRL 150
+P CR ++DC K LN VP LP ++ L N+I L P+ F K L
Sbjct: 219 KPEVTSICRTYLFPKPLLDCSSKDLNHVPSGLPSDIVKMDLSGNNIKHLKPQQFLMSKDL 278
Query: 151 RRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFIC 210
+ ++LS N + + AF GL L L L+NN+L GV +L+ LR L + N +IC
Sbjct: 279 KLLNLSSNSLQHIDTAAFAGLLYLRELDLSNNSLHNFQYGVLEDLYFLRKLSLGNNPWIC 338
Query: 211 DCHLSWLHRWLKRYPRL---GLYTKCFAPSHIKGQNILD 246
D ++ +L WLK +P + GL C P +G + D
Sbjct: 339 DYNIHYLIYWLKHHPGVQYSGL--TCAEPDEFRGWRVED 375
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 119/317 (37%), Gaps = 63/317 (19%)
Query: 97 CPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLS 156
C + +DC+++ L V P L L +N L F+ + RL+ +DL
Sbjct: 44 CKEYIEAGEKYLDCQDQQLTTVMQDWPTDIQHLLLARNKFQVLRDNMFSQFTRLKSLDLQ 103
Query: 157 KNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSW 216
+N IS + AF GL LT+L L +N L + + + RL LR+ +N + CDC L
Sbjct: 104 QNDISMLEDGAFAGLTQLTTLLLQHNGLRTASEEMLLPMHRLSYLRVYDNPWNCDCALDS 163
Query: 217 LHRWLK--RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS---GSSMETRSKIYREECS 271
L R ++ LG Y KC P ++G + I E C+ + +R +I
Sbjct: 164 LVRTMQLPSNRNLGNYAKCAEPLSMRGYKMRKI-NVELLCAPDRDGEVPSRPQI------ 216
Query: 272 TDFHPYNSCPVEKPTGECAAEPSCPHPCRCA---DGIVDCREKGLNKVPILLPEATTELT 328
+P CR ++DC K LN VP LP ++
Sbjct: 217 ------------------KVKPEVTSICRTYLFPKPLLDCSSKDLNHVPSGLPSDIVKMD 258
Query: 329 YMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDI 388
L N+I L P+ F K L+ + L N +
Sbjct: 259 ------------------------------LSGNNIKHLKPQQFLMSKDLKLLNLSSNSL 288
Query: 389 TELPPKAFANYKRLRRM 405
+ AFA LR +
Sbjct: 289 QHIDTAAFAGLLYLREL 305
>gi|313242133|emb|CBY34306.1| unnamed protein product [Oikopleura dioica]
Length = 231
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 104/215 (48%), Gaps = 14/215 (6%)
Query: 10 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL---KRYPRLGLYTKCFAPSHIK 66
+++ G+F +L +L+TL + + CDC +S+ +L +R + +T C
Sbjct: 2 ISFFQPGIFDKLKKLKTLSVEKLPLYCDCQISYFISYLDSKRRSEGIAPHTTCSGGRLKD 61
Query: 67 G-----QNILDIPEHEFKCSGPVEKP-TGECAAEPSCPHPCRCADGIVD-----CREKGL 115
G + I D+ C + P +C EP+CP C C D CR+K L
Sbjct: 62 GDLSMHELIRDLDPSRLYCPTSYDLPEMRKCPDEPTCPAECSCKAATSDTIHMNCRDKRL 121
Query: 116 NKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLT 175
KVP PE L LE N++TEL + F Y+R++ +DLSKN+I + AF GL +L
Sbjct: 122 QKVPKHGPENVVNLILEDNELTELRAREFTQYRRIQGLDLSKNKIETIDEKAFDGLVNLQ 181
Query: 176 SLTLNNNNLTYLPDGVFAELFRLRTLRISENSFIC 210
L L N LT + G L L+T+ ++ N C
Sbjct: 182 KLYLYENQLTSIGPGTLNGLRGLQTIMMNSNKLKC 216
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 88/231 (38%), Gaps = 58/231 (25%)
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+++ G+F +L +L+TL + + CDC +S+ +L R ++ AP
Sbjct: 2 ISFFQPGIFDKLKKLKTLSVEKLPLYCDCQISYFISYLDSKRR----SEGIAP------- 50
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYN-SCPVEKPTGE---CAAEPSCPHPC 299
CSG ++ + E D P CP E C EP+CP C
Sbjct: 51 -------HTTCSGGRLKD-GDLSMHELIRDLDPSRLYCPTSYDLPEMRKCPDEPTCPAEC 102
Query: 300 RCADGIVD-----CREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN 354
C D CR+K L KVP PE L
Sbjct: 103 SCKAATSDTIHMNCRDKRLQKVPKHGPENVVNLI-------------------------- 136
Query: 355 RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
LE N++TEL + F Y+R++ + L +N I + KAF L+++
Sbjct: 137 ----LEDNELTELRAREFTQYRRIQGLDLSKNKIETIDEKAFDGLVNLQKL 183
>gi|149639235|ref|XP_001507460.1| PREDICTED: leucine-rich repeat-containing protein 17
[Ornithorhynchus anatinus]
Length = 437
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 134/303 (44%), Gaps = 42/303 (13%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +N + L + VF L LR+ +N + C C + L L+ R LG Y KC P
Sbjct: 136 LQHNRIKVLTEEVFIHTPLLNYLRLYDNPWRCSCEMETLVTMLQIPRNRNLGNYAKCEGP 195
Query: 63 SHIKGQNILDI--------------PEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIV 108
K Q + ++ P ++ PV KP + S H +
Sbjct: 196 EDRKNQKLKELKVEELCDEDQKPPAPRNQAVGKPPVIKP----VVDSSLCHIYVFPIQTL 251
Query: 109 DCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAF 168
DC+ K L K+P +P +L L N I +L PK F + L+R++LS N I + AF
Sbjct: 252 DCKRKELRKIPTNIPPDIVKLDLSNNKINQLRPKEFEDVHELKRLNLSSNGIEFIDPAAF 311
Query: 169 QGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL- 227
GL L L L NN+L GV +L+ L+ L + +N + CD ++ +L+ WL+ + +
Sbjct: 312 SGLTHLEELDLTNNSLQNFDYGVLEDLYFLKILWLKDNPWRCDYNIHYLYYWLRHHYNVH 371
Query: 228 --GLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKP 285
GL +C AP+ KG + G + + Y EEC D P S P + P
Sbjct: 372 YNGL--ECKAPTEYKGWFV-----------GKYVRS----YFEECPKDLLP--SYPDQDP 412
Query: 286 TGE 288
E
Sbjct: 413 EDE 415
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 121/303 (39%), Gaps = 52/303 (17%)
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
+DC+E+ L V PE + L +N I L FA +++L+ +DL +N ISK+ DA
Sbjct: 65 LDCQERRLVYVLADWPEDLIHMLLARNKIRTLKNSMFAKFRKLKSLDLQQNDISKIETDA 124
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYP 225
F GL LT+L L +N + L + VF L LR+ +N + C C + L L+ R
Sbjct: 125 FFGLSRLTTLLLQHNRIKVLTEEVFIHTPLLNYLRLYDNPWRCSCEMETLVTMLQIPRNR 184
Query: 226 RLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFH---PYNSCPV 282
LG Y KC P K Q + ++ E C D P N
Sbjct: 185 NLGNYAKCEGPEDRKNQKLKELKVEEL-----------------CDEDQKPPAPRNQAVG 227
Query: 283 EKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLY 342
+ P + + S H +DC+ K L K+P +P +L
Sbjct: 228 KPPVIKPVVDSSLCHIYVFPIQTLDCKRKELRKIPTNIPPDIVKLD-------------- 273
Query: 343 SYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
L N I +L PK F + L+R+ L N I + P AF+ L
Sbjct: 274 ----------------LSNNKINQLRPKEFEDVHELKRLNLSSNGIEFIDPAAFSGLTHL 317
Query: 403 RRM 405
+
Sbjct: 318 EEL 320
>gi|426227531|ref|XP_004007871.1| PREDICTED: leucine-rich repeat-containing protein 17 [Ovis aries]
Length = 441
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 119/255 (46%), Gaps = 22/255 (8%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +N + L + VF L LR+ +N + C C + L L+ R LG Y KC +P
Sbjct: 136 LQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCEMETLISMLQIPRNRNLGNYAKCESP 195
Query: 63 SHIKGQNILDIPEHEF-------------KCSGPVEKPTGECAAEPSCPHPCRCADGIVD 109
+K + + I + + SG + P + + S H +D
Sbjct: 196 QELKNKKLRQIKSEQLCNEEGNEQLEPKPQLSG--KPPVIKTEVDSSLCHNYVFPIQTLD 253
Query: 110 CREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ 169
CR K L KVP +P +L L N I +L PK F + L++++LS N I + AF
Sbjct: 254 CRRKELKKVPNNIPPDIVKLDLSHNKINQLRPKEFEDVHELKKLNLSSNGIQFIDPAAFL 313
Query: 170 GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL-- 227
GL L L L+NN+L GV +L+ L+ L + EN + CD ++ +L+ WLK + +
Sbjct: 314 GLTHLEELDLSNNSLQNFDYGVLEDLYFLKLLWLRENPWRCDYNIHYLYYWLKHHYNVHY 373
Query: 228 -GLYTKCFAPSHIKG 241
GL +C P KG
Sbjct: 374 NGL--ECKMPEEYKG 386
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 124/300 (41%), Gaps = 45/300 (15%)
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
+DC+E+ L V P+ + L +N I L F+ +K+L+ +DL +N+ISK+ +A
Sbjct: 65 LDCQERKLVYVLPDWPQDLLHMLLARNKIRILKNSMFSKFKKLKSLDLQQNEISKIESEA 124
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYP 225
F GL LT+L L +N + L + VF L LR+ +N + C C + L L+ R
Sbjct: 125 FFGLNKLTTLLLQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCEMETLISMLQIPRNR 184
Query: 226 RLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKP 285
LG Y KC +P +K + + I + C+ EE + P + P
Sbjct: 185 NLGNYAKCESPQELKNKKLRQIKSEQL-CN------------EEGNEQLEPKPQLSGKPP 231
Query: 286 TGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYI 345
+ + S H +DCR K L KVP +P +L
Sbjct: 232 VIKTEVDSSLCHNYVFPIQTLDCRRKELKKVPNNIPPDIVKLD----------------- 274
Query: 346 SNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N I +L PK F + L+++ L N I + P AF L +
Sbjct: 275 -------------LSHNKINQLRPKEFEDVHELKKLNLSSNGIQFIDPAAFLGLTHLEEL 321
>gi|432942764|ref|XP_004083061.1| PREDICTED: leucine-rich repeat-containing protein 17-like [Oryzias
latipes]
Length = 456
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 124/257 (48%), Gaps = 17/257 (6%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +NNL + + V + L LRI +N + C C L L R+L+ LG Y KC P
Sbjct: 137 LQHNNLKSVSEEVLVPMPHLIYLRIYDNPWSCQCPLDGLVRFLQVPSNRNLGNYAKCAEP 196
Query: 63 SHIKGQNI----LDIPEHEFKCSGPVEKPTGECAA---EPSCPHPCRCA---DGIVDCRE 112
+ +KG+ + D+ E + E P + P CR +DC
Sbjct: 197 ASLKGEKLKTLKADVLCDEGTKAVDEEDPPATLPSIKKNPEAMSLCRVQYFPQPRMDCSN 256
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLK 172
K ++ +P +P ++ L +N I L PK F K L+ ++LS N + ++ AF GL
Sbjct: 257 KNMSYIPSEMPSEMHKIDLSRNGIKHLRPKQFLLSKDLKTLNLSSNNLQQIDTAAFSGLL 316
Query: 173 SLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL---GL 229
L L L+NN+L Y GV +L+ LRTL + N + CD ++ +L WLK +P + GL
Sbjct: 317 HLHDLDLSNNSLRYFQYGVLEDLYFLRTLLLDNNPWTCDYNIHYLVYWLKLHPGVSYRGL 376
Query: 230 YTKCFAPSHIKGQNILD 246
+ C P+ +G + D
Sbjct: 377 F--CSHPAEFRGWRVED 391
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 121/307 (39%), Gaps = 52/307 (16%)
Query: 97 CPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLS 156
C + +DC+ + L V P L L +N L FA +K+L+ +DL
Sbjct: 55 CTEYTEAGEKYLDCQGRQLTSVMQNWPRDIQHLILSRNKFKVLRDNMFAQFKKLKSLDLQ 114
Query: 157 KNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSW 216
+N I V AF GL LT+L L +NNL + + V + L LRI +N + C C L
Sbjct: 115 QNAIFMVEDHAFSGLSKLTTLLLQHNNLKSVSEEVLVPMPHLIYLRIYDNPWSCQCPLDG 174
Query: 217 LHRWLK--RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDF 274
L R+L+ LG Y KC P+ +KG+ + + G +K EE
Sbjct: 175 LVRFLQVPSNRNLGNYAKCAEPASLKGEKLKTLKADVLCDEG------TKAVDEE----- 223
Query: 275 HPYNSCPVEKPTGECAAEPSCPHPCRCA---DGIVDCREKGLNKVPILLPEATTELTYMV 331
P + P K P CR +DC K ++ +P +P + M
Sbjct: 224 DPPATLPSIKKN------PEAMSLCRVQYFPQPRMDCSNKNMSYIPSEMP------SEMH 271
Query: 332 SIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITEL 391
ID L +N I L PK F K L+ + L N++ ++
Sbjct: 272 KID------------------------LSRNGIKHLRPKQFLLSKDLKTLNLSSNNLQQI 307
Query: 392 PPKAFAN 398
AF+
Sbjct: 308 DTAAFSG 314
>gi|344236680|gb|EGV92783.1| Leucine-rich repeat-containing protein 17 [Cricetulus griseus]
Length = 342
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 122/257 (47%), Gaps = 26/257 (10%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +N + L + VF L LR+ +N + C C L L L+ R LG Y KC +P
Sbjct: 37 LQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCMCELETLVSMLQIPRNRNLGNYAKCESP 96
Query: 63 SHIKGQNILDI---------------PEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGI 107
+K + +L + P+ + PV +P + + P +
Sbjct: 97 PAMKNKKLLQLKPEELCDEEEREQLDPKPQVSGRPPVIRPEADSTLCHNYVFPIQT---- 152
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
+DC+ K L KVP +P +L L N I++L PK F + L++++LS N I + A
Sbjct: 153 LDCKSKELKKVPGNIPPDIVKLDLSYNKISQLRPKEFEDAHELKKLNLSSNGIGFIDPAA 212
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL 227
F GL L L L+NNNL GV +L+ L+ L + +N + CD ++ +L+ WLK + +
Sbjct: 213 FLGLTHLEELDLSNNNLQNFDYGVLEDLYFLKLLWLRDNPWRCDYNIHYLYYWLKHHYNV 272
Query: 228 ---GLYTKCFAPSHIKG 241
GL +C P KG
Sbjct: 273 HYNGL--ECKTPEEYKG 287
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 110/266 (41%), Gaps = 49/266 (18%)
Query: 144 FANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRI 203
F+ +KRL+ +DL +N+ISK+ DAF GL LT+L L +N + L + VF L LR+
Sbjct: 2 FSRFKRLKSLDLQQNEISKIESDAFFGLNKLTTLLLQHNQIKVLTEEVFIYTPLLSYLRL 61
Query: 204 SENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMET 261
+N + C C L L L+ R LG Y KC +P +K + +L + E +
Sbjct: 62 YDNPWHCMCELETLVSMLQIPRNRNLGNYAKCESPPAMKNKKLLQLKPEELCDEEEREQL 121
Query: 262 RSKIYREECSTDFHPYNSC--PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPIL 319
K P S PV +P + + P + +DC+ K L KVP
Sbjct: 122 DPK-----------PQVSGRPPVIRPEADSTLCHNYVFPIQT----LDCKSKELKKVPGN 166
Query: 320 LPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLR 379
+P +L L N I++L PK F + L+
Sbjct: 167 IPPDIVKLD------------------------------LSYNKISQLRPKEFEDAHELK 196
Query: 380 RIRLEQNDITELPPKAFANYKRLRRM 405
++ L N I + P AF L +
Sbjct: 197 KLNLSSNGIGFIDPAAFLGLTHLEEL 222
>gi|354492497|ref|XP_003508384.1| PREDICTED: leucine-rich repeat-containing protein 17 [Cricetulus
griseus]
Length = 441
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 122/257 (47%), Gaps = 26/257 (10%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +N + L + VF L LR+ +N + C C L L L+ R LG Y KC +P
Sbjct: 136 LQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCMCELETLVSMLQIPRNRNLGNYAKCESP 195
Query: 63 SHIKGQNILDI---------------PEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGI 107
+K + +L + P+ + PV +P + + P +
Sbjct: 196 PAMKNKKLLQLKPEELCDEEEREQLDPKPQVSGRPPVIRPEADSTLCHNYVFPIQT---- 251
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
+DC+ K L KVP +P +L L N I++L PK F + L++++LS N I + A
Sbjct: 252 LDCKSKELKKVPGNIPPDIVKLDLSYNKISQLRPKEFEDAHELKKLNLSSNGIGFIDPAA 311
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL 227
F GL L L L+NNNL GV +L+ L+ L + +N + CD ++ +L+ WLK + +
Sbjct: 312 FLGLTHLEELDLSNNNLQNFDYGVLEDLYFLKLLWLRDNPWRCDYNIHYLYYWLKHHYNV 371
Query: 228 ---GLYTKCFAPSHIKG 241
GL +C P KG
Sbjct: 372 HYNGL--ECKTPEEYKG 386
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 133/331 (40%), Gaps = 49/331 (14%)
Query: 79 KCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITE 138
+ G + P A C + +DC+E+ L V P+ + L +N I
Sbjct: 36 RAGGSRKAPVKRYAPGLPCDVYTYLHEKYLDCQERKLVYVLPNWPQDLLHMLLARNKIRV 95
Query: 139 LPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRL 198
L F+ +KRL+ +DL +N+ISK+ DAF GL LT+L L +N + L + VF L
Sbjct: 96 LKNNMFSRFKRLKSLDLQQNEISKIESDAFFGLNKLTTLLLQHNQIKVLTEEVFIYTPLL 155
Query: 199 RTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
LR+ +N + C C L L L+ R LG Y KC +P +K + +L + E
Sbjct: 156 SYLRLYDNPWHCMCELETLVSMLQIPRNRNLGNYAKCESPPAMKNKKLLQLKPEELCDEE 215
Query: 257 SSMETRSKIYREECSTDFHPYNSC--PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLN 314
+ K P S PV +P + + P + +DC+ K L
Sbjct: 216 EREQLDPK-----------PQVSGRPPVIRPEADSTLCHNYVFPIQT----LDCKSKELK 260
Query: 315 KVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFAN 374
KVP +P +L L N I++L PK F +
Sbjct: 261 KVPGNIPPDIVKLD------------------------------LSYNKISQLRPKEFED 290
Query: 375 YKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L+++ L N I + P AF L +
Sbjct: 291 AHELKKLNLSSNGIGFIDPAAFLGLTHLEEL 321
>gi|118151364|ref|NP_001071618.1| leucine-rich repeat-containing protein 17 precursor [Bos taurus]
gi|87578331|gb|AAI13339.1| Leucine rich repeat containing 17 [Bos taurus]
gi|146231768|gb|ABQ12959.1| leucine rich repeat containing 17 [Bos taurus]
gi|296488550|tpg|DAA30663.1| TPA: leucine rich repeat containing 17 [Bos taurus]
Length = 441
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 119/255 (46%), Gaps = 22/255 (8%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +N + L + VF L LR+ +N + C C + L L+ R LG Y KC +P
Sbjct: 136 LQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCEMETLISMLQIPRNRNLGNYAKCESP 195
Query: 63 SHIKGQNILDIPEHEF-------------KCSGPVEKPTGECAAEPSCPHPCRCADGIVD 109
+K + + I + + SG + P + + + H +D
Sbjct: 196 QELKNKKLRQIKSEQLCNEEESEQLEPRPQLSG--KPPVIKTEVDSTLCHNYVFPIQTLD 253
Query: 110 CREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ 169
CR K L KVP +P +L L N I +L PK F + L++++LS N I + AF
Sbjct: 254 CRRKELKKVPNNIPPDIVKLDLSHNKINQLRPKEFEDVHELKKLNLSSNGIQFIDPAAFL 313
Query: 170 GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL-- 227
GL L L L+NN+L GV +L+ L+ L + EN + CD ++ +L+ WLK + +
Sbjct: 314 GLTHLEELDLSNNSLQNFDYGVLEDLYFLKLLWLRENPWRCDYNIHYLYYWLKHHYNVHY 373
Query: 228 -GLYTKCFAPSHIKG 241
GL +C P KG
Sbjct: 374 NGL--ECKMPEEYKG 386
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 134/329 (40%), Gaps = 49/329 (14%)
Query: 79 KCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITE 138
K S PV++ A +C + +DC+E+ L V P+ + L +N I
Sbjct: 40 KSSNPVKR----YAPGLACEVYTYLHEKYLDCQERKLVYVLPDWPQDLLHMLLARNKIRI 95
Query: 139 LPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRL 198
L F+ +K+L+ +DL +N+ISK+ +AF GL LT+L L +N + L + VF L
Sbjct: 96 LKNSMFSKFKKLKSLDLQQNEISKIESEAFFGLNKLTTLLLQHNQIKVLTEEVFIYTPLL 155
Query: 199 RTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
LR+ +N + C C + L L+ R LG Y KC +P +K + + I + C+
Sbjct: 156 SYLRLYDNPWHCTCEMETLISMLQIPRNRNLGNYAKCESPQELKNKKLRQIKSEQL-CN- 213
Query: 257 SSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKV 316
EE S P + P + + + H +DCR K L KV
Sbjct: 214 -----------EEESEQLEPRPQLSGKPPVIKTEVDSTLCHNYVFPIQTLDCRRKELKKV 262
Query: 317 PILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYK 376
P +P +L L N I +L PK F +
Sbjct: 263 PNNIPPDIVKLD------------------------------LSHNKINQLRPKEFEDVH 292
Query: 377 RLRRIRLEQNDITELPPKAFANYKRLRRM 405
L+++ L N I + P AF L +
Sbjct: 293 ELKKLNLSSNGIQFIDPAAFLGLTHLEEL 321
>gi|357617307|gb|EHJ70712.1| putative toll [Danaus plexippus]
Length = 1322
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 97/200 (48%), Gaps = 22/200 (11%)
Query: 29 ISENSFICDCHLSWLHR---W--LKRYPRLGLY--TKCFAPSHIKG--QNILDIPEHEFK 79
I N FIC+CH+ WL + W +++YPR C S+ G N++D+PE +F
Sbjct: 663 IGNNPFICNCHMIWLQKINLWNHMRQYPRFADLESVTCEVVSNKYGGKANLMDVPETQFL 722
Query: 80 CSGPVEKPTG-------ECAAEPSCPHPCRC------ADGIVDCREKGLNKVPILLPEAT 126
CS + C + +CP C C ++DC G ++P +P
Sbjct: 723 CSYETHCSSSCFCCDFEACDCKMTCPEGCSCFHDSNWNSNVIDCSNVGYTEIPEKIPMDA 782
Query: 127 TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTY 186
TEL L+ ND L F K+L ++ L+ + I+ + D F GL SL L L NN+LT
Sbjct: 783 TELYLDGNDFGTLGSHLFIGKKKLHKLYLNNSNIATMDNDTFNGLHSLNVLHLENNHLTE 842
Query: 187 LPDGVFAELFRLRTLRISEN 206
L G F++ LR L +++N
Sbjct: 843 LAGGEFSQTKHLRELYLNDN 862
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 135/345 (39%), Gaps = 84/345 (24%)
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
+PE+ L + N+IT+L + + +R +D+S N + +V D S+ L LNN
Sbjct: 556 MPESLEWLDIHMNNITKLDNEQNVQ-QNIRMLDVSYNSLERV--DEMSIPDSIQILFLNN 612
Query: 182 NNLTYLPDGVFAEL----------FRLRTLR-------------------ISENSFICDC 212
N + + G F + +LRT+ I N FIC+C
Sbjct: 613 NKIHTIHPGTFIQKRNLEKVVITDNKLRTVELAAFTLPHIPKHRTLPKFFIGNNPFICNC 672
Query: 213 HLSWLHR---W--LKRYPRLGLY--TKCFAPSHIKG--QNILDIPEHEFKCSGSSMETRS 263
H+ WL + W +++YPR C S+ G N++D+PE +F CS
Sbjct: 673 HMIWLQKINLWNHMRQYPRFADLESVTCEVVSNKYGGKANLMDVPETQFLCS-------- 724
Query: 264 KIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRC------ADGIVDCREKGLNKVP 317
Y CS+ C E C + +CP C C ++DC G ++P
Sbjct: 725 --YETHCSSSCF---CCDFEA----CDCKMTCPEGCSCFHDSNWNSNVIDCSNVGYTEIP 775
Query: 318 ILLPEATTELTYMVSIDR--------VDKVLLYSYISNNFKRWTNRSR-----------R 358
+P TEL Y+ D + K L+ NN T +
Sbjct: 776 EKIPMDATEL-YLDGNDFGTLGSHLFIGKKKLHKLYLNNSNIATMDNDTFNGLHSLNVLH 834
Query: 359 LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLR 403
LE N +TEL F+ K LR + L N +T + F N LR
Sbjct: 835 LENNHLTELAGGEFSQTKHLRELYLNDNFLTSVGNSTFENLSSLR 879
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 97/438 (22%), Positives = 169/438 (38%), Gaps = 103/438 (23%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L +NN+ LP VF LF L +L ++ N
Sbjct: 147 LGDNNIYMLPSEVFCPLFSLESLNLTNN-------------------------------- 174
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCAD----GIVDCREKGLNKVPI 120
+ Q+I DI G + G A SC + D I+ + GL+ +
Sbjct: 175 -RIQDISDI--------GFSDWGKGPIAPGKSCNTGLKMLDLSHNNILRLPDNGLSSL-- 223
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN 180
+ L ++ N I E+ +AF L+ ++LS N++ V + FQ + + ++L
Sbjct: 224 ---RSLEVLNIQNNLINEIGDRAFVGLNSLKTLNLSGNKLVAVPPELFQSSRVIREISLA 280
Query: 181 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR----WLKRYPRLGLYTKCFA- 235
NN+L+ + G+ L +L L +S N D W++R L R L L A
Sbjct: 281 NNSLSVIAPGLLEGLDQLEKLDLSRNRLTND----WVNRDTFSGLIRLIILNLSYNSLAR 336
Query: 236 --PSHIKGQN---ILDIPEHEFK--CSGSSMETRS-----------KIYREECSTDFHPY 277
P + N +L++ +E K +G+ E ++ KI E ++
Sbjct: 337 LDPISFQDLNNLQVLNLDNNEIKLISNGAFAELKNLHQLSISDNKIKILNENIFSNLFVL 396
Query: 278 NSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI-LLPEATTELTYMVSIDRV 336
+ ++ E S H C + I ++ GLN + ++P + L ++ S+D +
Sbjct: 397 SQLYLDN------NEISSIHD-NCFENITYLQDLGLNGNNLNVIPSSIKRLRFLKSLD-I 448
Query: 337 DKVLLYSYISNNFKRWTNRS---------RRLEQNDITELPPKAFANYKRLRRIRLEQND 387
K NN + +N S RL N IT +P F++ L+ + L N
Sbjct: 449 GK--------NNITKISNTSFEGLEELYGLRLVDNYITSIPKDTFSSLPSLQVLNLASNK 500
Query: 388 ITELPPKAFANYKRLRRM 405
I + AF + L+ +
Sbjct: 501 IETIEQNAFVSNPTLKAI 518
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 91/213 (42%), Gaps = 24/213 (11%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+NN + + +G FAEL L L IS+N + +++ F S
Sbjct: 353 LDNNEIKLISNGAFAELKNLHQLSISDNKI--------------KILNENIFSNLFVLSQ 398
Query: 65 IKGQN--ILDIPEHEFKCSGPVEK---PTGECAAEPSCPHPCRCADGIVDCREKGLNKVP 119
+ N I I ++ F+ ++ PS R + D + + K+
Sbjct: 399 LYLDNNEISSIHDNCFENITYLQDLGLNGNNLNVIPSSIKRLRFLKSL-DIGKNNITKIS 457
Query: 120 ILLPEATTEL---RLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
E EL RL N IT +P F++ L+ ++L+ N+I + +AF +L +
Sbjct: 458 NTSFEGLEELYGLRLVDNYITSIPKDTFSSLPSLQVLNLASNKIETIEQNAFVSNPTLKA 517
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISENSFI 209
+ L+ N LT + GVF +L L L IS+N I
Sbjct: 518 IRLDGNKLTDIR-GVFNKLNTLGWLNISDNKLI 549
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 104/261 (39%), Gaps = 38/261 (14%)
Query: 165 VDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF--ICDCHLS-WLHRWL 221
++F+GL L SL L +NN+ LP VF LF L +L ++ N I D S W +
Sbjct: 133 AESFRGLMELRSLDLGDNNIYMLPSEVFCPLFSLESLNLTNNRIQDISDIGFSDWGKGPI 192
Query: 222 KRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKC--SGSSMETRSKIYREECSTDFHPYNS 279
K SH NIL +P++ S + ++ + E F NS
Sbjct: 193 APGKSCNTGLKMLDLSH---NNILRLPDNGLSSLRSLEVLNIQNNLINEIGDRAFVGLNS 249
Query: 280 CPVEKPTGE--CAAEPSCPHPCRCADGIVDCREKGL--NKVPILLPEATTELTYMVSIDR 335
+G A P R RE L N + ++ P + +D+
Sbjct: 250 LKTLNLSGNKLVAVPPELFQSSRV------IREISLANNSLSVIAP------GLLEGLDQ 297
Query: 336 VDKV-LLYSYISNNFKRWTNRSR----------RLEQNDITELPPKAFANYKRLRRIRLE 384
++K+ L + ++N+ W NR L N + L P +F + L+ + L+
Sbjct: 298 LEKLDLSRNRLTND---WVNRDTFSGLIRLIILNLSYNSLARLDPISFQDLNNLQVLNLD 354
Query: 385 QNDITELPPKAFANYKRLRRM 405
N+I + AFA K L ++
Sbjct: 355 NNEIKLISNGAFAELKNLHQL 375
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 98/236 (41%), Gaps = 47/236 (19%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR----WLKRYPRLGLYTKC 59
+L NN+L+ + G+ L +L L +S N D W++R L R L L
Sbjct: 278 SLANNSLSVIAPGLLEGLDQLEKLDLSRNRLTND----WVNRDTFSGLIRLIILNLSYNS 333
Query: 60 FA---PSHIKGQN---ILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREK 113
A P + N +L++ +E K + AE H +D + +
Sbjct: 334 LARLDPISFQDLNNLQVLNLDNNEIKL------ISNGAFAELKNLHQLSISDNKIKILNE 387
Query: 114 GLNKVPILLPEATTELRLEQNDITELPPKAFANY--------------------KRLR-- 151
+ +L ++L L+ N+I+ + F N KRLR
Sbjct: 388 NIFSNLFVL----SQLYLDNNEISSIHDNCFENITYLQDLGLNGNNLNVIPSSIKRLRFL 443
Query: 152 -RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
+D+ KN I+K++ +F+GL+ L L L +N +T +P F+ L L+ L ++ N
Sbjct: 444 KSLDIGKNNITKISNTSFEGLEELYGLRLVDNYITSIPKDTFSSLPSLQVLNLASN 499
>gi|345782902|ref|XP_003432345.1| PREDICTED: leucine-rich repeat-containing protein 17 [Canis lupus
familiaris]
Length = 428
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 122/257 (47%), Gaps = 26/257 (10%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +N L L + VF L LR+ +N + C C + L L+ R LG Y KC +P
Sbjct: 123 LQHNRLQVLTEEVFLYTPLLGYLRLYDNPWHCTCEMETLISMLQIPRNRNLGNYAKCESP 182
Query: 63 SHIKGQNILDIPEHEF-------------KCSG--PVEKPTGECAAEPSCPHPCRCADGI 107
+K + + I + + SG PV KP + + + P +
Sbjct: 183 HELKNKKLRQIKPEQLCDEEEREQLDPKPQVSGRPPVIKPEVDSSLCYNYVFPIQT---- 238
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
+DC+ K L KVP +P +L L N I +L PK F + LR+++LS N I + A
Sbjct: 239 LDCKRKELKKVPKNIPPDIVKLDLSYNKINQLRPKEFEDVHELRKLNLSSNGIEFIDPAA 298
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL 227
F GL L L L+NN+L GV +L+ L+ L + +N + CD ++ +L+ WLK + +
Sbjct: 299 FLGLTHLEELDLSNNSLQNFDYGVLEDLYFLKLLWLGDNPWRCDYNIHYLYYWLKHHYNV 358
Query: 228 ---GLYTKCFAPSHIKG 241
GL +C P KG
Sbjct: 359 HYNGL--ECKTPEEYKG 373
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 125/300 (41%), Gaps = 45/300 (15%)
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
+DC+E+ L V P + L +N I L K F+ +KRL+ +DL +N+ISK+ +A
Sbjct: 52 LDCQERKLVYVLPDWPPDLLHMLLARNKIRILKDKMFSRFKRLKTLDLQQNEISKIESEA 111
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYP 225
F GL LT+L L +N L L + VF L LR+ +N + C C + L L+ R
Sbjct: 112 FFGLNKLTTLLLQHNRLQVLTEEVFLYTPLLGYLRLYDNPWHCTCEMETLISMLQIPRNR 171
Query: 226 RLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKP 285
LG Y KC +P +K + + I + C RE+ PV KP
Sbjct: 172 NLGNYAKCESPHELKNKKLRQIKPEQL-CDEEE--------REQLDPKPQVSGRPPVIKP 222
Query: 286 TGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYI 345
+ + + P + +DC+ K L KVP +P +L
Sbjct: 223 EVDSSLCYNYVFPIQT----LDCKRKELKKVPKNIPPDIVKLD----------------- 261
Query: 346 SNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N I +L PK F + LR++ L N I + P AF L +
Sbjct: 262 -------------LSYNKINQLRPKEFEDVHELRKLNLSSNGIEFIDPAAFLGLTHLEEL 308
>gi|15281513|gb|AAK94292.1|AF364046_1 Slit3 protein [Gallus gallus]
Length = 792
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 105 DGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVA 164
D +V C KGL +P +P+ TEL LE N +T +P K + ++ L IDLS N IS +A
Sbjct: 1 DSVVRCSNKGLRVMPKGIPKDVTELYLEGNHLTAVP-KGLSAFRHLTLIDLSNNSISVLA 59
Query: 165 ------------------------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRT 200
V AF GL+SL LTL+ N+++ +P+G F +L L
Sbjct: 60 NYTFSNMTQLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLVSLSH 119
Query: 201 LRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
L + N CDC+L WL W+K + +C P + + +L P H F+C
Sbjct: 120 LALGTNPLHCDCNLRWLSEWVKAGYKEPGIARCSGPEAMVDRLLLTTPTHHFQC 173
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TL+ N+++ +P+G F +L L L + N CDC+L WL W+K + +C P
Sbjct: 97 TLHGNDISSVPEGSFNDLVSLSHLALGTNPLHCDCNLRWLSEWVKAGYKEPGIARCSGPE 156
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ + +L P H F+C PV+
Sbjct: 157 AMVDRLLLTTPTHHFQCKEPVD 178
>gi|68342019|ref|NP_001020326.1| leucine rich repeat containing 17 precursor [Rattus norvegicus]
gi|50926957|gb|AAH79098.1| Leucine rich repeat containing 17 [Rattus norvegicus]
gi|149046600|gb|EDL99425.1| leucine rich repeat containing 17 [Rattus norvegicus]
Length = 446
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 124/256 (48%), Gaps = 18/256 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +N + L + VF L LR+ +N + C C L L L+ R LG Y KC +P
Sbjct: 141 LQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCACELETLVSMLQIPRNRNLGNYAKCGSP 200
Query: 63 SHIKGQNILDIPEHEFKCSGPVEK--PTGECAAEPSCPHP----CRCADGI-----VDCR 111
++ + +L + E E+ P + + P+ P C + + +DC+
Sbjct: 201 PALRNKKLLQLKPQELCDEEEKERLDPIPQVSGVPAVIRPEADSTLCHNYVFPIQTLDCK 260
Query: 112 EKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
K L KVP +P +L L N I++L PK F + L++++LS N + + AF GL
Sbjct: 261 RKELKKVPNNIPPNIVKLDLSYNKISQLRPKEFEDVHELKKLNLSSNGLEFIDPAAFLGL 320
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL---G 228
L L L+NN+L GV +L+ L+ L + +N + CD + +L+ WLK + + G
Sbjct: 321 IHLEELDLSNNSLQSFDYGVLEDLYFLKLLWLRDNPWRCDYSIHYLYYWLKHHYNVHYNG 380
Query: 229 LYTKCFAPSHIKGQNI 244
L +C P KG ++
Sbjct: 381 L--ECKTPEEYKGWSV 394
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 126/305 (41%), Gaps = 55/305 (18%)
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
+DC+E+ L V P+ + L +N I L F+ +KRL+ +DL +N+ISK+ +A
Sbjct: 70 LDCQERKLVYVLPDWPQDLLHMLLARNKIRVLKNNMFSKFKRLKSLDLQQNEISKIESEA 129
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYP 225
F GL LT+L L +N + L + VF L LR+ +N + C C L L L+ R
Sbjct: 130 FFGLNKLTTLLLQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCACELETLVSMLQIPRNR 189
Query: 226 RLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKP 285
LG Y KC +P ++ + +L + E C E P+ +
Sbjct: 190 NLGNYAKCGSPPALRNKKLLQLKPQEL-CDEEEKERLD-----------------PIPQV 231
Query: 286 TGECA-----AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL 340
+G A A+ + H +DC+ K L KVP +P +L
Sbjct: 232 SGVPAVIRPEADSTLCHNYVFPIQTLDCKRKELKKVPNNIPPNIVKLD------------ 279
Query: 341 LYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYK 400
L N I++L PK F + L+++ L N + + P AF
Sbjct: 280 ------------------LSYNKISQLRPKEFEDVHELKKLNLSSNGLEFIDPAAFLGLI 321
Query: 401 RLRRM 405
L +
Sbjct: 322 HLEEL 326
>gi|395818500|ref|XP_003782664.1| PREDICTED: leucine-rich repeat-containing protein 17 [Otolemur
garnettii]
Length = 441
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 120/257 (46%), Gaps = 26/257 (10%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +N + L + VF L LR+ +N + C C + L L+ R LG Y KC +P
Sbjct: 136 LQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCEIETLISMLQIPRNRNLGNYAKCNSP 195
Query: 63 SHIKGQNILDI---------------PEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGI 107
+K + + I P+ + PV KP + + P +
Sbjct: 196 QELKNKKLRQITSEQLCNEEEKEQLDPKPQVSGRSPVIKPEVDSTLCHNYVFPIQT---- 251
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
+DC+ K L KVP +P +L L N I +L PK F + L++++LS N I + A
Sbjct: 252 LDCKRKELKKVPNNIPPDIVKLDLSYNKINQLRPKEFEDVHELKKLNLSSNGIEFIDPAA 311
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL 227
F GL L L L+NN+L GV +L+ L+ L + +N + CD ++ +L+ WLK + +
Sbjct: 312 FSGLTHLEELDLSNNSLQNFDYGVLEDLYFLKLLWLRDNPWRCDYNIHYLYYWLKHHYNV 371
Query: 228 ---GLYTKCFAPSHIKG 241
GL +C P KG
Sbjct: 372 HYNGL--ECKMPEEYKG 386
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 124/303 (40%), Gaps = 45/303 (14%)
Query: 105 DGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVA 164
+ +DC+E+ L V P+ + L +N I L F+ +K+L+ +DL +N+ISK+
Sbjct: 62 EKFLDCQERKLVYVLPDWPQDLLHMLLARNKIRILKNNMFSKFKKLKSLDLQQNEISKIE 121
Query: 165 VDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-- 222
+AF GL LT+L L +N + L + VF L LR+ +N + C C + L L+
Sbjct: 122 SEAFFGLNKLTTLLLQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCEIETLISMLQIP 181
Query: 223 RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPV 282
R LG Y KC +P +K + + I T ++ EE P
Sbjct: 182 RNRNLGNYAKCNSPQELKNKKLRQI-------------TSEQLCNEEEKEQLDPKPQVSG 228
Query: 283 EKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLY 342
P + + + H +DC+ K L KVP +P +L
Sbjct: 229 RSPVIKPEVDSTLCHNYVFPIQTLDCKRKELKKVPNNIPPDIVKLD-------------- 274
Query: 343 SYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
L N I +L PK F + L+++ L N I + P AF+ L
Sbjct: 275 ----------------LSYNKINQLRPKEFEDVHELKKLNLSSNGIEFIDPAAFSGLTHL 318
Query: 403 RRM 405
+
Sbjct: 319 EEL 321
>gi|301768593|ref|XP_002919710.1| PREDICTED: leucine-rich repeat-containing protein 17-like
[Ailuropoda melanoleuca]
gi|281343671|gb|EFB19255.1| hypothetical protein PANDA_008365 [Ailuropoda melanoleuca]
Length = 441
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 122/257 (47%), Gaps = 26/257 (10%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +N + L + VF L LR+ +N + C C L L L+ R LG Y KC +P
Sbjct: 136 LQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCELETLISMLQIPRNRNLGNYAKCESP 195
Query: 63 SHIKGQNILDIPEHEF-------------KCSG--PVEKPTGECAAEPSCPHPCRCADGI 107
+K + + I + + SG PV KP + + + P +
Sbjct: 196 QELKNKKLRQIKSEQLCNEEESEQLDPRPQVSGRPPVIKPEVDSSLCYNYVFPIQT---- 251
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
+DC+ K L KVP +P +L L N I +L PK F + L++++LS N I + A
Sbjct: 252 LDCKRKELKKVPNNIPPDIVKLDLSYNKINQLRPKEFEDVHELKKLNLSSNGIEFIDPAA 311
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL 227
F GL L L L+NN+L GV +L+ L+ L + +N + CD ++ +L+ WLK + +
Sbjct: 312 FLGLTHLEELDLSNNSLQNFDYGVLEDLYFLKLLWLRDNPWRCDYNIHYLYYWLKHHYNV 371
Query: 228 ---GLYTKCFAPSHIKG 241
GL +C P KG
Sbjct: 372 HYNGL--ECKMPEEYKG 386
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 124/300 (41%), Gaps = 45/300 (15%)
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
+DC+E+ L V P+ + L +N I L + F+ +KRL+ +DL +N+ISK+ DA
Sbjct: 65 LDCQERKLVYVLPDWPQDLLHMLLARNKIRILKNQMFSKFKRLKSLDLQQNEISKIESDA 124
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYP 225
F GL LT+L L +N + L + VF L LR+ +N + C C L L L+ R
Sbjct: 125 FFGLNKLTTLLLQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCELETLISMLQIPRNR 184
Query: 226 RLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKP 285
LG Y KC +P +K + + I + C+ EE S P P
Sbjct: 185 NLGNYAKCESPQELKNKKLRQIKSEQL-CN------------EEESEQLDPRPQVSGRPP 231
Query: 286 TGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYI 345
+ + S + +DC+ K L KVP +P +L
Sbjct: 232 VIKPEVDSSLCYNYVFPIQTLDCKRKELKKVPNNIPPDIVKLD----------------- 274
Query: 346 SNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N I +L PK F + L+++ L N I + P AF L +
Sbjct: 275 -------------LSYNKINQLRPKEFEDVHELKKLNLSSNGIEFIDPAAFLGLTHLEEL 321
>gi|344270813|ref|XP_003407236.1| PREDICTED: leucine-rich repeat-containing protein 17 [Loxodonta
africana]
Length = 441
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 124/257 (48%), Gaps = 26/257 (10%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +N + L + VF + L LR+ +N + C C + L L+ + LG Y KC +P
Sbjct: 136 LQHNQIKVLTEEVFIYMPLLSYLRLYDNPWHCTCEIETLISMLQVPKNRNLGNYAKCESP 195
Query: 63 SHIKGQNILDI-------------PEHEFKCSG--PVEKPTGECAAEPSCPHPCRCADGI 107
+K + + I P+ + + SG PV KP + + P +
Sbjct: 196 HELKNKKLRQIKSKQLCNEEEQEQPDPKPQVSGRPPVIKPEVDSTLCHNYVFPIQT---- 251
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
+DC+ K L KVP +P +L L N I +L PK F + L++++LS N I + A
Sbjct: 252 LDCKRKELKKVPKNIPPDIVKLDLSYNKIHQLRPKEFEDVHELKKLNLSSNGIEFIDPAA 311
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL 227
F GL L L L+NN+L GV +L+ L+ L + +N + CD ++ +L+ WLK + +
Sbjct: 312 FSGLTHLEELDLSNNSLQNFDYGVLEDLYFLKLLWLRDNPWRCDYNIHYLYYWLKHHYNV 371
Query: 228 ---GLYTKCFAPSHIKG 241
GL +C P KG
Sbjct: 372 HYNGL--ECKMPEEYKG 386
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 128/302 (42%), Gaps = 49/302 (16%)
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
+DC+E+ L V P+ + L +N + L F+ +K+L+ +DL +N+ISK+ +A
Sbjct: 65 LDCQERKLVYVLPDWPQDLLHMLLARNKMRVLKNNMFSKFKKLKSLDLQQNEISKIESEA 124
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYP 225
F GL LT+L L +N + L + VF + L LR+ +N + C C + L L+ +
Sbjct: 125 FFGLNKLTTLLLQHNQIKVLTEEVFIYMPLLSYLRLYDNPWHCTCEIETLISMLQVPKNR 184
Query: 226 RLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC--PVE 283
LG Y KC +P +K + + I + C+ E D P S PV
Sbjct: 185 NLGNYAKCESPHELKNKKLRQIKSKQL-CNEEEQE----------QPDPKPQVSGRPPVI 233
Query: 284 KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYS 343
KP + + P + +DC+ K L KVP +P +L
Sbjct: 234 KPEVDSTLCHNYVFPIQT----LDCKRKELKKVPKNIPPDIVKLD--------------- 274
Query: 344 YISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLR 403
L N I +L PK F + L+++ L N I + P AF+ L
Sbjct: 275 ---------------LSYNKIHQLRPKEFEDVHELKKLNLSSNGIEFIDPAAFSGLTHLE 319
Query: 404 RM 405
+
Sbjct: 320 EL 321
>gi|260814714|ref|XP_002602059.1| hypothetical protein BRAFLDRAFT_94439 [Branchiostoma floridae]
gi|229287364|gb|EEN58071.1| hypothetical protein BRAFLDRAFT_94439 [Branchiostoma floridae]
Length = 539
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 84/167 (50%), Gaps = 2/167 (1%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C + V C EKGL KVP +P ATT L L N I ++ F N L+ + L
Sbjct: 20 ACPSGCTCDEVTVICNEKGLTKVPTGIPSATTYLNLGNNRIKKIEASDFRNLNNLQHLYL 79
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLS 215
N I+++ +AF+GL LT+L L NN L + +F LRT+ + N + CDC +
Sbjct: 80 DSNDITQIDPEAFRGLSRLTTLQLMNNGLITVSQRLFDHTPSLRTVSLKGNPWSCDCRIR 139
Query: 216 WLHRWL--KRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSME 260
WL W+ ++ P +C P + G + F C G+ ++
Sbjct: 140 WLWEWVYSRQDPDAPEMPQCDYPYDLDGFYWDQLTADNFTCDGTEVD 186
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C + V C EKGL KVP +P ATT L + +R+ K+ +++F+
Sbjct: 20 ACPSGCTCDEVTVICNEKGLTKVPTGIPSATTYLN--LGNNRIKKIE-----ASDFRNLN 72
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N + L+ NDIT++ P+AF RL ++L N + + + F + LR +
Sbjct: 73 NLQHLYLDSNDITQIDPEAFRGLSRLTTLQLMNNGLITVSQRLFDHTPSLRTV 125
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 2/92 (2%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL--KRYPRLGLYTKCFAP 62
L NN L + +F LRT+ + N + CDC + WL W+ ++ P +C P
Sbjct: 103 LMNNGLITVSQRLFDHTPSLRTVSLKGNPWSCDCRIRWLWEWVYSRQDPDAPEMPQCDYP 162
Query: 63 SHIKGQNILDIPEHEFKCSGPVEKPTGECAAE 94
+ G + F C G P+ +
Sbjct: 163 YDLDGFYWDQLTADNFTCDGTEVDPSDNGGTD 194
>gi|37182896|gb|AAQ89248.1| p37NB [Homo sapiens]
gi|119603713|gb|EAW83307.1| leucine rich repeat containing 17, isoform CRA_a [Homo sapiens]
Length = 440
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 123/256 (48%), Gaps = 19/256 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +N + L + VF L LR+ +N + C C + L L+ R LG Y KC +P
Sbjct: 136 LQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCEIETLISMLQIPRNRNLGNYAKCESP 195
Query: 63 SHIKGQNILDIPEHEFKCSGPVEK--PTGECAAEPSCPHP----CRCADGI-----VDCR 111
K + + I + C+ E+ P + + P P C + + +DC+
Sbjct: 196 QEQKNKKLRQIKSEQL-CNEEKEQLDPKPQVSGRPPVIKPEVDSTFCHNYVFPIQTLDCK 254
Query: 112 EKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
K L KVP +P +L L N I +L PK F + L++++LS N I + AF GL
Sbjct: 255 RKELKKVPNNIPPDIVKLDLSYNKINQLRPKEFEDVHELKKLNLSSNGIEFIDPAAFLGL 314
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL---G 228
L L L+NN+L GV +L+ L+ L + +N + CD ++ +L+ WLK + + G
Sbjct: 315 THLEELDLSNNSLQNFDYGVLEDLYFLKLLWLRDNPWRCDYNIHYLYYWLKHHYNVHFNG 374
Query: 229 LYTKCFAPSHIKGQNI 244
L +C P KG ++
Sbjct: 375 L--ECKTPEEYKGWSV 388
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 124/300 (41%), Gaps = 46/300 (15%)
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
+DC+E+ L V P+ + L +N I L F+ +K+L+ +DL +N+ISK+ +A
Sbjct: 65 LDCQERKLVYVLPGWPQDLLHMLLARNKIRTLKNNMFSKFKKLKSLDLQQNEISKIESEA 124
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYP 225
F GL LT+L L +N + L + VF L LR+ +N + C C + L L+ R
Sbjct: 125 FFGLNKLTTLLLQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCEIETLISMLQIPRNR 184
Query: 226 RLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKP 285
LG Y KC +P K + + I + C+ +E+ PV KP
Sbjct: 185 NLGNYAKCESPQEQKNKKLRQIKSEQL-CNEE---------KEQLDPKPQVSGRPPVIKP 234
Query: 286 TGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYI 345
+ + P + +DC+ K L KVP +P +L
Sbjct: 235 EVDSTFCHNYVFPIQT----LDCKRKELKKVPNNIPPDIVKLD----------------- 273
Query: 346 SNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N I +L PK F + L+++ L N I + P AF L +
Sbjct: 274 -------------LSYNKINQLRPKEFEDVHELKKLNLSSNGIEFIDPAAFLGLTHLEEL 320
>gi|431839415|gb|ELK01341.1| Leucine-rich repeat-containing protein 17 [Pteropus alecto]
Length = 441
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 119/257 (46%), Gaps = 26/257 (10%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHL----SWLHRWLKRYPRLGLYTKCF 60
L +N + L + VF L LR+ +N + C C + S LH + + LG Y KC
Sbjct: 136 LQHNQIKILTEEVFIYTPLLSYLRLYDNPWHCTCDMETLISMLH--IPKNRNLGNYAKCE 193
Query: 61 APSHIKGQNILDIPEHEF-------------KCSG--PVEKPTGECAAEPSCPHPCRCAD 105
+P +K + + I E + SG PV KP + S H
Sbjct: 194 SPQELKNKKLRQIKSEELCNEEEKDQLAPKPQVSGRPPVIKP----EVDSSLCHIYVFPI 249
Query: 106 GIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAV 165
+DC+ K L KVP +P +L L N I +L PK F + L++++LS N I +
Sbjct: 250 QTLDCKRKELKKVPNNIPPDIVKLDLSHNKINQLRPKEFEDVHELKKLNLSSNGIEFIDP 309
Query: 166 DAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP 225
AF GL L L L+NN+L GV +L+ L+ L + +N + CD + +L+ WLK +
Sbjct: 310 AAFLGLTHLEELDLSNNSLQNFDYGVLEDLYFLKLLWLKDNPWRCDYSIHYLYYWLKHHY 369
Query: 226 RLGLY-TKCFAPSHIKG 241
+ + +C P KG
Sbjct: 370 NVHYHGLECKMPEEYKG 386
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 122/302 (40%), Gaps = 49/302 (16%)
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
+DC+E+ L V P+ + L +N I L F+ +K+L+ +DL +N+ISK+ +
Sbjct: 65 LDCQERKLVYVLPGWPQDLLHMLLARNKIRILKNNMFSKFKKLKSLDLQQNEISKIESET 124
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHL----SWLHRWLKR 223
F GL LT+L L +N + L + VF L LR+ +N + C C + S LH + +
Sbjct: 125 FFGLNKLTTLLLQHNQIKILTEEVFIYTPLLSYLRLYDNPWHCTCDMETLISMLH--IPK 182
Query: 224 YPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVE 283
LG Y KC +P +K + + I E C+ EE P
Sbjct: 183 NRNLGNYAKCESPQELKNKKLRQIKSEEL-CN------------EEEKDQLAPKPQVSGR 229
Query: 284 KPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYS 343
P + + S H +DC+ K L KVP +P +L
Sbjct: 230 PPVIKPEVDSSLCHIYVFPIQTLDCKRKELKKVPNNIPPDIVKLD--------------- 274
Query: 344 YISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLR 403
L N I +L PK F + L+++ L N I + P AF L
Sbjct: 275 ---------------LSHNKINQLRPKEFEDVHELKKLNLSSNGIEFIDPAAFLGLTHLE 319
Query: 404 RM 405
+
Sbjct: 320 EL 321
>gi|161333856|ref|NP_083253.1| leucine-rich repeat-containing protein 17 precursor [Mus musculus]
gi|51701692|sp|Q9CXD9.1|LRC17_MOUSE RecName: Full=Leucine-rich repeat-containing protein 17; Flags:
Precursor
gi|12857623|dbj|BAB31060.1| unnamed protein product [Mus musculus]
gi|20988082|gb|AAH30317.1| Leucine rich repeat containing 17 [Mus musculus]
gi|148671257|gb|EDL03204.1| mCG6428 [Mus musculus]
Length = 443
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 122/256 (47%), Gaps = 18/256 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +N + L + F L LR+ +N + C C L L L+ R LG Y KC +P
Sbjct: 138 LQHNQIKVLTEEAFIYTPLLSYLRLYDNPWHCTCELETLISMLQIPRNRNLGNYAKCGSP 197
Query: 63 SHIKGQNILDIPEHEFKCSGPVEK--PTGECAAEPSCPHP----CRCADGI-----VDCR 111
++ + +L + E E+ P + + P+ P C + + +DC+
Sbjct: 198 PALRNKKLLQLKPQELCDEEEKEQLDPKPQVSGIPAVIRPEADSTLCHNYVFPIQTLDCK 257
Query: 112 EKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
K L KVP +P +L L N I +L PK F + L++++LS N I + AF GL
Sbjct: 258 RKELKKVPSNIPPDIVKLDLSSNKIRQLRPKEFEDVHELKKLNLSSNGIEFIDPAAFLGL 317
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL---G 228
L L L+NN+L GV +L+ L+ L + +N + CD + +L+ WLK + + G
Sbjct: 318 IHLEELDLSNNSLQNFDYGVLEDLYFLKLLWLRDNPWRCDYSIHYLYYWLKHHYNVHYNG 377
Query: 229 LYTKCFAPSHIKGQNI 244
L +C P KG ++
Sbjct: 378 L--ECKTPEEYKGWSV 391
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 120/300 (40%), Gaps = 45/300 (15%)
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
+DC+E+ L V P+ + L +N I L FA +KRL+ +DL +N+ISK+ +A
Sbjct: 67 LDCQERKLVYVLPDWPQDLLHMLLARNKIRVLKNNMFAKFKRLKSLDLQQNEISKIESEA 126
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYP 225
F GL LT+L L +N + L + F L LR+ +N + C C L L L+ R
Sbjct: 127 FFGLNKLTTLLLQHNQIKVLTEEAFIYTPLLSYLRLYDNPWHCTCELETLISMLQIPRNR 186
Query: 226 RLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKP 285
LG Y KC +P ++ + +L + E C EE P
Sbjct: 187 NLGNYAKCGSPPALRNKKLLQLKPQEL-CD------------EEEKEQLDPKPQVSGIPA 233
Query: 286 TGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYI 345
A+ + H +DC+ K L KVP +P +L
Sbjct: 234 VIRPEADSTLCHNYVFPIQTLDCKRKELKKVPSNIPPDIVKLD----------------- 276
Query: 346 SNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N I +L PK F + L+++ L N I + P AF L +
Sbjct: 277 -------------LSSNKIRQLRPKEFEDVHELKKLNLSSNGIEFIDPAAFLGLIHLEEL 323
>gi|397466185|ref|XP_003804848.1| PREDICTED: leucine-rich repeat-containing protein 17 isoform 1 [Pan
paniscus]
Length = 434
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 121/256 (47%), Gaps = 18/256 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +N + L + VF L LR+ +N + C C + L L+ R LG Y KC +P
Sbjct: 136 LQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCEIETLISMLQIPRNRNLGNYAKCESP 195
Query: 63 SHIKGQNILDIPEHEFKCSGPVEK--PTGECAAEPSCPHP----CRCADGI-----VDCR 111
K + + I + E+ P + + P P C + + +DC+
Sbjct: 196 QEQKNKKLRQIKSEQLCNEEEKEQLDPKPQVSGRPPVIKPEVDSTFCHNYVFPIQTLDCK 255
Query: 112 EKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
K L KVP +P +L L N I +L PK F + L++++LS N I + AF GL
Sbjct: 256 RKELKKVPNNIPPDIVKLDLSYNKINQLRPKEFEDVHELKKLNLSSNGIEFIDPAAFLGL 315
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL---G 228
L L L+NN+L GV +L+ L+ L + +N + CD ++ +L+ WLK + + G
Sbjct: 316 THLEELDLSNNSLQNFDYGVLEDLYFLKLLWLRDNPWRCDYNIHYLYYWLKHHYNVHFNG 375
Query: 229 LYTKCFAPSHIKGQNI 244
L +C P KG ++
Sbjct: 376 L--ECKTPEEYKGWSV 389
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 121/300 (40%), Gaps = 45/300 (15%)
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
+DC+E+ L V P+ + L +N I L F+ +K+L+ +DL +N+ISK+ +A
Sbjct: 65 LDCQERKLVYVLPGWPQDLLHMLLARNKIRILKNNMFSKFKKLKSLDLQQNEISKIESEA 124
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYP 225
F GL LT+L L +N + L + VF L LR+ +N + C C + L L+ R
Sbjct: 125 FFGLNKLTTLLLQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCEIETLISMLQIPRNR 184
Query: 226 RLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKP 285
LG Y KC +P K + + I + C+ EE P P
Sbjct: 185 NLGNYAKCESPQEQKNKKLRQIKSEQL-CN------------EEEKEQLDPKPQVSGRPP 231
Query: 286 TGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYI 345
+ + + H +DC+ K L KVP +P +L
Sbjct: 232 VIKPEVDSTFCHNYVFPIQTLDCKRKELKKVPNNIPPDIVKLD----------------- 274
Query: 346 SNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N I +L PK F + L+++ L N I + P AF L +
Sbjct: 275 -------------LSYNKINQLRPKEFEDVHELKKLNLSSNGIEFIDPAAFLGLTHLEEL 321
>gi|297681211|ref|XP_002818358.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
protein 17 [Pongo abelii]
Length = 441
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 121/256 (47%), Gaps = 18/256 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +N + L + VF L LR+ +N + C C + L L+ R LG Y KC +P
Sbjct: 136 LQHNQIKVLTEEVFVYTPLLSYLRLYDNPWHCTCEIETLISMLQIPRNRNLGNYAKCESP 195
Query: 63 SHIKGQNILDIPEHEFKCSGPVEK--PTGECAAEPSCPHP----CRCADGI-----VDCR 111
K + + I + E+ P + + P P C + + +DC+
Sbjct: 196 QEQKNKKLRQIKSEQLCNEEEKEQLDPKPQVSGRPPVIKPEVDSTFCHNYVFPIQTLDCK 255
Query: 112 EKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
K L KVP +P +L L N I +L PK F + L++++LS N I + AF GL
Sbjct: 256 RKELKKVPNNIPPDIVKLDLSYNKINQLRPKEFEDVHELKKLNLSSNGIEFIDPAAFLGL 315
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL---G 228
L L L+NN+L GV +L+ L+ L + +N + CD ++ +L+ WLK + + G
Sbjct: 316 THLEELDLSNNSLQNFDYGVLEDLYFLKLLWLRDNPWRCDYNIHYLYYWLKHHYNVHFNG 375
Query: 229 LYTKCFAPSHIKGQNI 244
L +C P KG ++
Sbjct: 376 L--ECKMPEEYKGWSV 389
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 121/300 (40%), Gaps = 45/300 (15%)
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
+DC+E+ L V P+ + L +N I L F+ +K+L+ +DL +N+ISK+ +A
Sbjct: 65 LDCQERKLVYVLSGWPQDLLHMLLARNKIRILKNNMFSKFKKLKSLDLQQNEISKIESEA 124
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYP 225
F GL LT+L L +N + L + VF L LR+ +N + C C + L L+ R
Sbjct: 125 FFGLNKLTTLLLQHNQIKVLTEEVFVYTPLLSYLRLYDNPWHCTCEIETLISMLQIPRNR 184
Query: 226 RLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKP 285
LG Y KC +P K + + I + C+ EE P P
Sbjct: 185 NLGNYAKCESPQEQKNKKLRQIKSEQL-CN------------EEEKEQLDPKPQVSGRPP 231
Query: 286 TGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYI 345
+ + + H +DC+ K L KVP +P +L
Sbjct: 232 VIKPEVDSTFCHNYVFPIQTLDCKRKELKKVPNNIPPDIVKLD----------------- 274
Query: 346 SNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N I +L PK F + L+++ L N I + P AF L +
Sbjct: 275 -------------LSYNKINQLRPKEFEDVHELKKLNLSSNGIEFIDPAAFLGLTHLEEL 321
>gi|109067741|ref|XP_001086757.1| PREDICTED: leucine-rich repeat-containing protein 17 [Macaca
mulatta]
gi|402864424|ref|XP_003896465.1| PREDICTED: leucine-rich repeat-containing protein 17 [Papio anubis]
Length = 441
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 121/256 (47%), Gaps = 18/256 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +N + L + VF L LR+ +N + C C + L L+ R LG Y KC +P
Sbjct: 136 LQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCEIETLISMLQIPRNRNLGNYAKCESP 195
Query: 63 SHIKGQNILDIPEHEFKCSGPVEK--PTGECAAEPSCPHP----CRCADGI-----VDCR 111
K + + I + E+ P + + P P C + + +DC+
Sbjct: 196 QEQKNKKLRQIKSEQLCNEEEKEQLDPKPQVSGRPPVIKPEVDSTFCHNYVFPIQTLDCK 255
Query: 112 EKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
K L KVP +P +L L N I +L PK F + L++++LS N I + AF GL
Sbjct: 256 RKELKKVPNNIPPDIVKLDLSYNKINQLRPKEFEDVHELKKLNLSSNGIEFIDPTAFLGL 315
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL---G 228
L L L+NN+L GV +L+ L+ L + +N + CD ++ +L+ WLK + + G
Sbjct: 316 THLEELDLSNNSLQNFDYGVLEDLYFLKLLWLRDNPWRCDYNIHYLYYWLKHHYNVHFNG 375
Query: 229 LYTKCFAPSHIKGQNI 244
L +C P KG ++
Sbjct: 376 L--ECKTPEEYKGWSV 389
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 125/321 (38%), Gaps = 45/321 (14%)
Query: 87 PTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFAN 146
P A C + +DC+E+ L V P+ + L +N I L F+
Sbjct: 44 PVKRYAPSLPCDVYTYLHEKYLDCQERKLVYVLPGWPQDLLHMLLARNKIRILKNNMFSK 103
Query: 147 YKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
+K+L+ +DL +N+ISK+ +AF GL LT+L L +N + L + VF L LR+ +N
Sbjct: 104 FKKLKSLDLQQNEISKIESEAFFGLNKLTTLLLQHNQIKVLTEEVFIYTPLLSYLRLYDN 163
Query: 207 SFICDCHLSWLHRWLK--RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSK 264
+ C C + L L+ R LG Y KC +P K + + I + C+
Sbjct: 164 PWHCTCEIETLISMLQIPRNRNLGNYAKCESPQEQKNKKLRQIKSEQL-CN--------- 213
Query: 265 IYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEAT 324
EE P P + + + H +DC+ K L KVP +P
Sbjct: 214 ---EEEKEQLDPKPQVSGRPPVIKPEVDSTFCHNYVFPIQTLDCKRKELKKVPNNIPPDI 270
Query: 325 TELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLE 384
+L L N I +L PK F + L+++ L
Sbjct: 271 VKLD------------------------------LSYNKINQLRPKEFEDVHELKKLNLS 300
Query: 385 QNDITELPPKAFANYKRLRRM 405
N I + P AF L +
Sbjct: 301 SNGIEFIDPTAFLGLTHLEEL 321
>gi|149704553|ref|XP_001488661.1| PREDICTED: leucine-rich repeat-containing protein 17 [Equus
caballus]
Length = 441
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 119/253 (47%), Gaps = 18/253 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +N + L + VF L LR+ +N + C C + L L+ R LG Y KC +P
Sbjct: 136 LQHNQIKVLTEEVFLYTPLLSYLRLYDNPWSCTCQMETLVSMLQIPRNRNLGNYAKCESP 195
Query: 63 SHIKGQNILDIPEHEFKCSGPVEK--PTGECAAEPSCPHP----CRCADGI-----VDCR 111
+K + + I + E+ P + + P P C + + +DC+
Sbjct: 196 PELKNKKLRQIKSEQLCSEEEKERVDPKPQVSGRPPVIKPEADSTLCYNYVFPIQTLDCK 255
Query: 112 EKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
K L KVP +P +L L N I L PK F + L++++LS N + + AF GL
Sbjct: 256 RKELKKVPNNIPPDIVKLDLSYNKIKLLRPKEFEDVHELKKLNLSSNGLEFIDPAAFLGL 315
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL---G 228
L L L+NN+L GV +L+ L+ L + +N + CD H+ +L+ WL+ + + G
Sbjct: 316 THLEELDLSNNSLQNFDYGVLEDLYFLKLLWLRDNPWRCDYHIHYLYYWLRHHYNVHYNG 375
Query: 229 LYTKCFAPSHIKG 241
L +C P KG
Sbjct: 376 L--ECKMPEEYKG 386
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 136/342 (39%), Gaps = 62/342 (18%)
Query: 81 SGPVEKPTGECAAEPSCPHPC-RCADGI------------VDCREKGLNKVPILLPEATT 127
G P G A S +P R A G+ +DC+E+ L V P+
Sbjct: 25 GGRSRAPHGRVAGGRSGSNPVKRYAPGLPCEVYTYLHEKYLDCQERKLVYVLPGWPQDLL 84
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+ L +N I L F+ +++L+ +DL +N+ISK+ +AF GL LT+L L +N + L
Sbjct: 85 HMLLARNKIRILKSSMFSKFQKLKSLDLQQNEISKIDNEAFFGLNKLTTLLLQHNQIKVL 144
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAPSHIKGQNIL 245
+ VF L LR+ +N + C C + L L+ R LG Y KC +P +K + +
Sbjct: 145 TEEVFLYTPLLSYLRLYDNPWSCTCQMETLVSMLQIPRNRNLGNYAKCESPPELKNKKLR 204
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC--PVEKPTGECAAEPSCPHPCRCAD 303
I + CS E D P S PV KP + + P +
Sbjct: 205 QIKSEQL-CSEEEKE----------RVDPKPQVSGRPPVIKPEADSTLCYNYVFPIQT-- 251
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQND 363
+DC+ K L KVP +P +L L N
Sbjct: 252 --LDCKRKELKKVPNNIPPDIVKLD------------------------------LSYNK 279
Query: 364 ITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
I L PK F + L+++ L N + + P AF L +
Sbjct: 280 IKLLRPKEFEDVHELKKLNLSSNGLEFIDPAAFLGLTHLEEL 321
>gi|114615225|ref|XP_001158135.1| PREDICTED: leucine-rich repeat-containing protein 17 isoform 1 [Pan
troglodytes]
gi|410215092|gb|JAA04765.1| leucine rich repeat containing 17 [Pan troglodytes]
gi|410259528|gb|JAA17730.1| leucine rich repeat containing 17 [Pan troglodytes]
gi|410340959|gb|JAA39426.1| leucine rich repeat containing 17 [Pan troglodytes]
Length = 441
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 121/256 (47%), Gaps = 18/256 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +N + L + VF L LR+ +N + C C + L L+ R LG Y KC +P
Sbjct: 136 LQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCEIETLISMLQIPRNRNLGNYAKCESP 195
Query: 63 SHIKGQNILDIPEHEFKCSGPVEK--PTGECAAEPSCPHP----CRCADGI-----VDCR 111
K + + I + E+ P + + P P C + + +DC+
Sbjct: 196 QEQKNKKLRQIKSEQLCNEEEKEQLDPKPQVSGRPPVIKPEVDSTFCHNYVFPIQTLDCK 255
Query: 112 EKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
K L KVP +P +L L N I +L PK F + L++++LS N I + AF GL
Sbjct: 256 RKELKKVPNNIPPDIVKLDLSYNKINQLRPKEFEDVHELKKLNLSSNGIEFIDPAAFLGL 315
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL---G 228
L L L+NN+L GV +L+ L+ L + +N + CD ++ +L+ WLK + + G
Sbjct: 316 THLEELDLSNNSLQNFDYGVLEDLYFLKLLWLRDNPWRCDYNIHYLYYWLKHHYNVHFNG 375
Query: 229 LYTKCFAPSHIKGQNI 244
L +C P KG ++
Sbjct: 376 L--ECKTPEEYKGWSV 389
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 121/300 (40%), Gaps = 45/300 (15%)
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
+DC+E+ L V P+ + L +N I L F+ +K+L+ +DL +N+ISK+ +A
Sbjct: 65 LDCQERKLVYVLPGWPQDLLHMLLARNKIRILKNNMFSKFKKLKSLDLQQNEISKIESEA 124
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYP 225
F GL LT+L L +N + L + VF L LR+ +N + C C + L L+ R
Sbjct: 125 FFGLNKLTTLLLQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCEIETLISMLQIPRNR 184
Query: 226 RLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKP 285
LG Y KC +P K + + I + C+ EE P P
Sbjct: 185 NLGNYAKCESPQEQKNKKLRQIKSEQL-CN------------EEEKEQLDPKPQVSGRPP 231
Query: 286 TGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYI 345
+ + + H +DC+ K L KVP +P +L
Sbjct: 232 VIKPEVDSTFCHNYVFPIQTLDCKRKELKKVPNNIPPDIVKLD----------------- 274
Query: 346 SNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N I +L PK F + L+++ L N I + P AF L +
Sbjct: 275 -------------LSYNKINQLRPKEFEDVHELKKLNLSSNGIEFIDPAAFLGLTHLEEL 321
>gi|332238085|ref|XP_003268233.1| PREDICTED: leucine-rich repeat-containing protein 17 isoform 1
[Nomascus leucogenys]
Length = 441
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 121/256 (47%), Gaps = 18/256 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +N + L + VF L LR+ +N + C C + L L+ R LG Y KC +P
Sbjct: 136 LQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCEIETLISMLQIPRNRNLGNYAKCESP 195
Query: 63 SHIKGQNILDIPEHEFKCSGPVEK--PTGECAAEPSCPHP----CRCADGI-----VDCR 111
K + + I + E+ P + + P P C + + +DC+
Sbjct: 196 QEQKNKKLRQIKSEQLCNEEEKEQLDPKPQVSGRPPVIKPEVDSTFCHNYVFPIQTLDCK 255
Query: 112 EKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
K L KVP +P +L L N I +L PK F + L++++LS N I + AF GL
Sbjct: 256 RKELKKVPNNIPPDIVKLDLSYNKINQLRPKEFEDVHELKKLNLSSNGIEFIDPAAFLGL 315
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL---G 228
L L L+NN+L GV +L+ L+ L + +N + CD ++ +L+ WLK + + G
Sbjct: 316 THLEELDLSNNSLQNFDYGVLEDLYFLKLLWLRDNPWRCDYNIHYLYYWLKHHYNVHFNG 375
Query: 229 LYTKCFAPSHIKGQNI 244
L +C P KG ++
Sbjct: 376 L--ECKTPEEYKGWSV 389
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 126/321 (39%), Gaps = 45/321 (14%)
Query: 87 PTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFAN 146
P A+ C + +DC+E+ L V P+ + L +N I L F+
Sbjct: 44 PVKRYASGLPCDVYTYLHEKYLDCQERKLVYVLPSWPQDLLHMLLARNKIRILKNNMFSK 103
Query: 147 YKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
+K+L+ +DL +N+ISK+ +AF GL LT+L L +N + L + VF L LR+ +N
Sbjct: 104 FKKLKSLDLQQNEISKIESEAFFGLNKLTTLLLQHNQIKVLTEEVFIYTPLLSYLRLYDN 163
Query: 207 SFICDCHLSWLHRWLK--RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSK 264
+ C C + L L+ R LG Y KC +P K + + I + C+
Sbjct: 164 PWHCTCEIETLISMLQIPRNRNLGNYAKCESPQEQKNKKLRQIKSEQL-CN--------- 213
Query: 265 IYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEAT 324
EE P P + + + H +DC+ K L KVP +P
Sbjct: 214 ---EEEKEQLDPKPQVSGRPPVIKPEVDSTFCHNYVFPIQTLDCKRKELKKVPNNIPPDI 270
Query: 325 TELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLE 384
+L L N I +L PK F + L+++ L
Sbjct: 271 VKLD------------------------------LSYNKINQLRPKEFEDVHELKKLNLS 300
Query: 385 QNDITELPPKAFANYKRLRRM 405
N I + P AF L +
Sbjct: 301 SNGIEFIDPAAFLGLTHLEEL 321
>gi|403257107|ref|XP_003921178.1| PREDICTED: leucine-rich repeat-containing protein 17 [Saimiri
boliviensis boliviensis]
Length = 441
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 120/256 (46%), Gaps = 18/256 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +N + L + VF L LR+ +N + C C + L L+ R LG Y KC P
Sbjct: 136 LQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCEIETLISMLQIPRNRNLGNYAKCETP 195
Query: 63 SHIKGQNILDIPEHEFKCSGPVEK--PTGECAAEPSCPHP----CRCADGI-----VDCR 111
K + + I + E+ P + + P P C + + +DC+
Sbjct: 196 QEQKNKKLRQIKSEQLCNEEEKEQLDPKPQVSGRPPVIKPEVDSTFCHNYVFPIQTLDCK 255
Query: 112 EKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
K L KVP +P +L L N I +L PK F + L++++LS N I + AF GL
Sbjct: 256 RKELKKVPNNIPPDIVKLDLSYNKINQLRPKEFEDVHELKKLNLSSNSIQFIDPAAFLGL 315
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL---G 228
L L L+NN+L GV +L+ L+ L + +N + CD ++ +L+ WLK + + G
Sbjct: 316 THLEELDLSNNSLQNFDYGVLEDLYFLKLLWLRDNPWRCDYNIHYLYYWLKHHYNVHFNG 375
Query: 229 LYTKCFAPSHIKGQNI 244
L +C P KG ++
Sbjct: 376 L--ECKTPEEYKGWSV 389
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 120/300 (40%), Gaps = 45/300 (15%)
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
+DC+E+ L V P+ + L +N I L F+ +K+L+ +DL +N+ISK+ +A
Sbjct: 65 LDCQERKLVYVLPDWPQDLLHMLLARNKIRILKNNMFSKFKKLKSLDLQQNEISKIESEA 124
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYP 225
F GL LT+L L +N + L + VF L LR+ +N + C C + L L+ R
Sbjct: 125 FFGLNKLTTLLLQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCEIETLISMLQIPRNR 184
Query: 226 RLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKP 285
LG Y KC P K + + I + C+ EE P P
Sbjct: 185 NLGNYAKCETPQEQKNKKLRQIKSEQL-CN------------EEEKEQLDPKPQVSGRPP 231
Query: 286 TGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYI 345
+ + + H +DC+ K L KVP +P +L
Sbjct: 232 VIKPEVDSTFCHNYVFPIQTLDCKRKELKKVPNNIPPDIVKLD----------------- 274
Query: 346 SNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N I +L PK F + L+++ L N I + P AF L +
Sbjct: 275 -------------LSYNKINQLRPKEFEDVHELKKLNLSSNSIQFIDPAAFLGLTHLEEL 321
>gi|72534676|ref|NP_001026862.1| leucine-rich repeat-containing protein 17 isoform 1 precursor [Homo
sapiens]
gi|51701682|sp|Q8N6Y2.1|LRC17_HUMAN RecName: Full=Leucine-rich repeat-containing protein 17; AltName:
Full=p37NB; Flags: Precursor
gi|20379756|gb|AAH27903.1| Leucine rich repeat containing 17 [Homo sapiens]
gi|190690219|gb|ACE86884.1| leucine rich repeat containing 17 protein [synthetic construct]
gi|190691593|gb|ACE87571.1| leucine rich repeat containing 17 protein [synthetic construct]
Length = 441
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 121/256 (47%), Gaps = 18/256 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +N + L + VF L LR+ +N + C C + L L+ R LG Y KC +P
Sbjct: 136 LQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCEIETLISMLQIPRNRNLGNYAKCESP 195
Query: 63 SHIKGQNILDIPEHEFKCSGPVEK--PTGECAAEPSCPHP----CRCADGI-----VDCR 111
K + + I + E+ P + + P P C + + +DC+
Sbjct: 196 QEQKNKKLRQIKSEQLCNEEEKEQLDPKPQVSGRPPVIKPEVDSTFCHNYVFPIQTLDCK 255
Query: 112 EKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
K L KVP +P +L L N I +L PK F + L++++LS N I + AF GL
Sbjct: 256 RKELKKVPNNIPPDIVKLDLSYNKINQLRPKEFEDVHELKKLNLSSNGIEFIDPAAFLGL 315
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL---G 228
L L L+NN+L GV +L+ L+ L + +N + CD ++ +L+ WLK + + G
Sbjct: 316 THLEELDLSNNSLQNFDYGVLEDLYFLKLLWLRDNPWRCDYNIHYLYYWLKHHYNVHFNG 375
Query: 229 LYTKCFAPSHIKGQNI 244
L +C P KG ++
Sbjct: 376 L--ECKTPEEYKGWSV 389
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 121/300 (40%), Gaps = 45/300 (15%)
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
+DC+E+ L V P+ + L +N I L F+ +K+L+ +DL +N+ISK+ +A
Sbjct: 65 LDCQERKLVYVLPGWPQDLLHMLLARNKIRTLKNNMFSKFKKLKSLDLQQNEISKIESEA 124
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYP 225
F GL LT+L L +N + L + VF L LR+ +N + C C + L L+ R
Sbjct: 125 FFGLNKLTTLLLQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCEIETLISMLQIPRNR 184
Query: 226 RLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKP 285
LG Y KC +P K + + I + C+ EE P P
Sbjct: 185 NLGNYAKCESPQEQKNKKLRQIKSEQL-CN------------EEEKEQLDPKPQVSGRPP 231
Query: 286 TGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYI 345
+ + + H +DC+ K L KVP +P +L
Sbjct: 232 VIKPEVDSTFCHNYVFPIQTLDCKRKELKKVPNNIPPDIVKLD----------------- 274
Query: 346 SNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N I +L PK F + L+++ L N I + P AF L +
Sbjct: 275 -------------LSYNKINQLRPKEFEDVHELKKLNLSSNGIEFIDPAAFLGLTHLEEL 321
>gi|310750333|ref|NP_001185529.1| leucine-rich repeat-containing protein 17 precursor [Gallus gallus]
gi|10241577|emb|CAC09417.1| p37NB protein [Gallus gallus]
Length = 437
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 119/254 (46%), Gaps = 17/254 (6%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +N + L + +F L LR+ +N + C+C L L L+ LG Y KC P
Sbjct: 133 LQHNQIKSLSEEIFIYTPSLNYLRLYDNPWHCNCELETLVTMLQVPTNRNLGNYAKCVHP 192
Query: 63 SHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHP----CRCADGI-----VDCREK 113
+K Q + I + CS + +P P C + ++C+ K
Sbjct: 193 IELKNQKLKQIKAEQL-CSEEDRQDPQNIKQKPEATKPEFDSSLCHMYVFPVPTLNCKRK 251
Query: 114 GLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKS 173
L KVP +P +L L N I +L PK F + L+ ++L+ N I+ + AF GL +
Sbjct: 252 DLKKVPGNIPPDIVKLDLSYNKIRQLRPKEFEDVSELKILNLNSNGITYIDPAAFSGLSN 311
Query: 174 LTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL---GLY 230
L L L+NN+L GV +L+ L+ L + EN + CD ++ +L WLK + + GL
Sbjct: 312 LEELDLSNNSLQNFEYGVLEDLYFLKVLWLRENPWRCDYNIHYLFYWLKHHYNVHYNGL- 370
Query: 231 TKCFAPSHIKGQNI 244
+C P KG ++
Sbjct: 371 -ECKMPEEYKGWSV 383
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 123/300 (41%), Gaps = 48/300 (16%)
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
+DC+E+ L V PE + L +N I +L F+ YK L+ +DL +N ISK+ A
Sbjct: 62 LDCQERKLVFVAPDWPEDLKHMLLARNRIRKLKNNMFSKYKVLKSLDLQQNDISKIESQA 121
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYP 225
F GL LT+L L +N + L + +F L LR+ +N + C+C L L L+
Sbjct: 122 FFGLNKLTTLLLQHNQIKSLSEEIFIYTPSLNYLRLYDNPWHCNCELETLVTMLQVPTNR 181
Query: 226 RLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKP 285
LG Y KC P +K Q + I + CS + I ++ +T KP
Sbjct: 182 NLGNYAKCVHPIELKNQKLKQIKAEQL-CSEEDRQDPQNIKQKPEAT-----------KP 229
Query: 286 TGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYI 345
+ S H ++C+ K L KVP +P +L
Sbjct: 230 ----EFDSSLCHMYVFPVPTLNCKRKDLKKVPGNIPPDIVKLD----------------- 268
Query: 346 SNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N I +L PK F + L+ + L N IT + P AF+ L +
Sbjct: 269 -------------LSYNKIRQLRPKEFEDVSELKILNLNSNGITYIDPAAFSGLSNLEEL 315
>gi|426357390|ref|XP_004046025.1| PREDICTED: leucine-rich repeat-containing protein 17 isoform 1
[Gorilla gorilla gorilla]
Length = 441
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 121/256 (47%), Gaps = 18/256 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +N + L + VF L LR+ +N + C C + L L+ R LG Y KC +P
Sbjct: 136 LQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCEIETLISMLQIPRNRNLGNYAKCESP 195
Query: 63 SHIKGQNILDIPEHEFKCSGPVEK--PTGECAAEPSCPHP----CRCADGI-----VDCR 111
K + + I + E+ P + + P P C + + +DC+
Sbjct: 196 QEQKNKKLRQIKSEQLCNEEEKEQLDPKPQVSGRPPVIKPEVDSTFCHNYVFPIQTLDCK 255
Query: 112 EKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
K L KVP +P +L L N I +L PK F + L++++LS N I + AF GL
Sbjct: 256 RKELKKVPNNIPPDIVKLDLSYNKINQLRPKEFEDVHELKKLNLSSNGIEFIDPAAFLGL 315
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL---G 228
L L L+NN+L GV +L+ L+ L + +N + CD ++ +L+ WLK + + G
Sbjct: 316 THLEELDLSNNSLQNFDYGVLEDLYFLKLLWLRDNPWRCDYNIHYLYYWLKHHYNVHFNG 375
Query: 229 LYTKCFAPSHIKGQNI 244
L +C P KG ++
Sbjct: 376 L--ECKTPEEYKGWSV 389
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 121/300 (40%), Gaps = 45/300 (15%)
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
+DC+E+ L V P+ + L +N I L F+ +K+L+ +DL +N+ISK+ +A
Sbjct: 65 LDCQERKLVYVLPGWPQDLLHMLLARNKIRILKNNMFSKFKKLKSLDLQQNEISKIESEA 124
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYP 225
F GL LT+L L +N + L + VF L LR+ +N + C C + L L+ R
Sbjct: 125 FFGLNKLTTLLLQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCEIETLISMLQIPRNR 184
Query: 226 RLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKP 285
LG Y KC +P K + + I + C+ EE P P
Sbjct: 185 NLGNYAKCESPQEQKNKKLRQIKSEQL-CN------------EEEKEQLDPKPQVSGRPP 231
Query: 286 TGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYI 345
+ + + H +DC+ K L KVP +P +L
Sbjct: 232 VIKPEVDSTFCHNYVFPIQTLDCKRKELKKVPNNIPPDIVKLD----------------- 274
Query: 346 SNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N I +L PK F + L+++ L N I + P AF L +
Sbjct: 275 -------------LSYNKINQLRPKEFEDVHELKKLNLSSNGIEFIDPAAFLGLTHLEEL 321
>gi|158261633|dbj|BAF82994.1| unnamed protein product [Homo sapiens]
Length = 441
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 121/256 (47%), Gaps = 18/256 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +N + L + VF L LR+ +N + C C + L L+ R LG Y KC +P
Sbjct: 136 LQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCEIETLISMLQIPRNRNLGNYAKCESP 195
Query: 63 SHIKGQNILDIPEHEFKCSGPVEK--PTGECAAEPSCPHP----CRCADGI-----VDCR 111
K + + I + E+ P + + P P C + + +DC+
Sbjct: 196 QEQKNKKLRQIKSEQLCNEEEKEQLDPKPQVSGRPPVIKPEVDSTFCHNYVFPIQTLDCK 255
Query: 112 EKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
K L KVP +P +L L N I +L PK F + L++++LS N I + AF GL
Sbjct: 256 RKELKKVPNNIPPDIVKLDLSYNKINQLRPKEFEDVHELKKLNLSSNGIEFIDPAAFLGL 315
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL---G 228
L L L+NN+L GV +L+ L+ L + +N + CD ++ +L+ WLK + + G
Sbjct: 316 THLEELDLSNNSLQNFDYGVLEDLYFLKLLWLRDNPWRCDYNIHYLYYWLKHHYNVHFNG 375
Query: 229 LYTKCFAPSHIKGQNI 244
L +C P KG ++
Sbjct: 376 L--ECKTPEEYKGWSV 389
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 121/300 (40%), Gaps = 45/300 (15%)
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
+DC+E+ L V P+ + L +N I L F+ +K+L+ +DL +N+IS++ +A
Sbjct: 65 LDCQERKLVYVLPGWPQDLLHMLLARNKIRTLKNNMFSKFKKLKSLDLQQNEISEIESEA 124
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYP 225
F GL LT+L L +N + L + VF L LR+ +N + C C + L L+ R
Sbjct: 125 FFGLNKLTTLLLQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCEIETLISMLQIPRNR 184
Query: 226 RLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKP 285
LG Y KC +P K + + I + C+ EE P P
Sbjct: 185 NLGNYAKCESPQEQKNKKLRQIKSEQL-CN------------EEEKEQLDPKPQVSGRPP 231
Query: 286 TGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYI 345
+ + + H +DC+ K L KVP +P +L
Sbjct: 232 VIKPEVDSTFCHNYVFPIQTLDCKRKELKKVPNNIPPDIVKLD----------------- 274
Query: 346 SNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N I +L PK F + L+++ L N I + P AF L +
Sbjct: 275 -------------LSYNKINQLRPKEFEDVHELKKLNLSSNGIEFIDPAAFLGLTHLEEL 321
>gi|326911181|ref|XP_003201940.1| PREDICTED: leucine-rich repeat-containing protein 17-like
[Meleagris gallopavo]
Length = 437
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 119/254 (46%), Gaps = 17/254 (6%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +N + L + +F L LR+ +N + C+C L L L+ LG Y KC P
Sbjct: 133 LQHNQIKSLSEEIFIYTPSLNYLRLYDNPWHCNCELETLVTMLQVPTNRNLGNYAKCAYP 192
Query: 63 SHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHP----CRCADGI-----VDCREK 113
+K Q + I + CS + +P P C + ++C+ K
Sbjct: 193 IELKNQKLKQIKADQL-CSEEDRQDPRNIKQKPEATKPEFDSSLCHMYVFPVPTLNCKRK 251
Query: 114 GLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKS 173
L KVP +P +L L N I +L PK F + L+ ++L+ N IS + AF GL +
Sbjct: 252 DLKKVPGNIPPDIIKLDLSNNKIRQLRPKEFEDVSELKILNLNSNGISYIDPAAFSGLSN 311
Query: 174 LTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL---GLY 230
L L L+NN+L GV +L+ L+ L + EN + CD ++ +L WLK + + GL
Sbjct: 312 LEELDLSNNSLQNFEYGVLEDLYFLKVLWLRENPWRCDYNIHYLFYWLKHHYNVHYNGL- 370
Query: 231 TKCFAPSHIKGQNI 244
+C P KG ++
Sbjct: 371 -ECKMPEEYKGWSV 383
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 123/300 (41%), Gaps = 48/300 (16%)
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
+DC+E+ L V PE + L +N I +L F+ YK L+ +DL +N ISK+ A
Sbjct: 62 LDCQERKLVFVAPDWPEDLKHMLLARNRIRKLKNNMFSKYKVLKSLDLQQNDISKIESQA 121
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYP 225
F GL LT+L L +N + L + +F L LR+ +N + C+C L L L+
Sbjct: 122 FFGLNKLTTLLLQHNQIKSLSEEIFIYTPSLNYLRLYDNPWHCNCELETLVTMLQVPTNR 181
Query: 226 RLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKP 285
LG Y KC P +K Q + I + CS + I ++ +T KP
Sbjct: 182 NLGNYAKCAYPIELKNQKLKQIKADQL-CSEEDRQDPRNIKQKPEAT-----------KP 229
Query: 286 TGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYI 345
+ S H ++C+ K L KVP +P +L
Sbjct: 230 ----EFDSSLCHMYVFPVPTLNCKRKDLKKVPGNIPPDIIKLD----------------- 268
Query: 346 SNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N I +L PK F + L+ + L N I+ + P AF+ L +
Sbjct: 269 -------------LSNNKIRQLRPKEFEDVSELKILNLNSNGISYIDPAAFSGLSNLEEL 315
>gi|355699864|gb|AES01263.1| leucine rich repeat containing 17 [Mustela putorius furo]
Length = 438
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 120/253 (47%), Gaps = 18/253 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +N + L + VF L LR+ +N + C C + L L+ R LG Y KC +P
Sbjct: 133 LQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCEMETLISMLQIPRNRNLGNYAKCESP 192
Query: 63 SHIKGQNILDIPEHEFKCSGPVEK--PTGECAAEPSCPHP----CRCADGI-----VDCR 111
+K + + + + E+ P + + P P C + + +DC+
Sbjct: 193 QELKNKKLRQLKPEQLCSEEESERLDPRPQVSRRPPVIKPEVDSSLCYNYVFPIQTLDCK 252
Query: 112 EKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
K L KVP +P +L L N I +L PK F + L++++LS N I + AF GL
Sbjct: 253 RKELKKVPNNIPPDIVKLDLSYNKINQLRPKEFEDVHELKKLNLSSNGIEFIDPAAFLGL 312
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL---G 228
L L L+NN+L GV +L+ L+ L + +N + CD ++ +L+ WLK + + G
Sbjct: 313 THLEELDLSNNSLQNFDYGVLEDLYFLKLLWLRDNPWRCDYNIHYLYYWLKHHYNVHYNG 372
Query: 229 LYTKCFAPSHIKG 241
L +C P KG
Sbjct: 373 L--ECKMPEEYKG 383
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 130/303 (42%), Gaps = 51/303 (16%)
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
+DC+E+ L V P+ + L +N I L K F+ +KRL+ +DL +N+ISK+ +A
Sbjct: 62 LDCQERRLVYVLPDWPQDLLHMLLARNKIRILKNKMFSKFKRLKSLDLQQNEISKIEGEA 121
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYP 225
F GL LT+L L +N + L + VF L LR+ +N + C C + L L+ R
Sbjct: 122 FFGLNKLTTLLLQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCEMETLISMLQIPRNR 181
Query: 226 RLGLYTKCFAPSHIKGQNILDIPEHEFKCS---GSSMETRSKIYREECSTDFHPYNSCPV 282
LG Y KC +P +K + + + + CS ++ R ++ R PV
Sbjct: 182 NLGNYAKCESPQELKNKKLRQLKPEQL-CSEEESERLDPRPQVSRRP-----------PV 229
Query: 283 EKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLY 342
KP + + + P + +DC+ K L KVP +P +L
Sbjct: 230 IKPEVDSSLCYNYVFPIQT----LDCKRKELKKVPNNIPPDIVKLD-------------- 271
Query: 343 SYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
L N I +L PK F + L+++ L N I + P AF L
Sbjct: 272 ----------------LSYNKINQLRPKEFEDVHELKKLNLSSNGIEFIDPAAFLGLTHL 315
Query: 403 RRM 405
+
Sbjct: 316 EEL 318
>gi|296209868|ref|XP_002751720.1| PREDICTED: leucine-rich repeat-containing protein 17 [Callithrix
jacchus]
Length = 441
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 120/256 (46%), Gaps = 18/256 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +N + L + VF L LR+ +N + C C + L L+ R LG Y KC P
Sbjct: 136 LQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCEIETLISMLQIPRNRNLGNYAKCETP 195
Query: 63 SHIKGQNILDIPEHEFKCSGPVEK--PTGECAAEPSCPHP----CRCADGI-----VDCR 111
K + + I + E+ P + + P P C + + +DC+
Sbjct: 196 QEQKTKKLRQIKSEQLCNEEEKEQLDPKPQVSGRPPVIKPEVDSTFCHNYVFPIQTLDCK 255
Query: 112 EKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
K L KVP +P +L L N I +L PK F + L++++LS N I + AF GL
Sbjct: 256 RKELKKVPNNIPPDIVKLDLSYNKINQLRPKEFEDVHELKKLNLSSNGIQFIDPAAFLGL 315
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL---G 228
L L L+NN+L GV +L+ L+ L + +N + CD ++ +L+ WLK + + G
Sbjct: 316 THLEELDLSNNSLQNFDYGVLEDLYFLKLLWLRDNPWRCDYNIHYLYYWLKHHYNVHFNG 375
Query: 229 LYTKCFAPSHIKGQNI 244
L +C P KG ++
Sbjct: 376 L--ECKTPEEYKGWSV 389
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 120/300 (40%), Gaps = 45/300 (15%)
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
+DC+E+ L V P+ + L +N I L F+ +K+L+ +DL +N+ISK+ +A
Sbjct: 65 LDCQERKLVYVLPDWPQDLLHMLLARNKIRILKNNMFSKFKKLKSLDLQQNEISKIESEA 124
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYP 225
F GL LT+L L +N + L + VF L LR+ +N + C C + L L+ R
Sbjct: 125 FFGLNKLTTLLLQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCEIETLISMLQIPRNR 184
Query: 226 RLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKP 285
LG Y KC P K + + I + C+ EE P P
Sbjct: 185 NLGNYAKCETPQEQKTKKLRQIKSEQL-CN------------EEEKEQLDPKPQVSGRPP 231
Query: 286 TGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYI 345
+ + + H +DC+ K L KVP +P +L
Sbjct: 232 VIKPEVDSTFCHNYVFPIQTLDCKRKELKKVPNNIPPDIVKLD----------------- 274
Query: 346 SNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N I +L PK F + L+++ L N I + P AF L +
Sbjct: 275 -------------LSYNKINQLRPKEFEDVHELKKLNLSSNGIQFIDPAAFLGLTHLEEL 321
>gi|410952132|ref|XP_003982740.1| PREDICTED: leucine-rich repeat-containing protein 17-like [Felis
catus]
Length = 441
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 119/253 (47%), Gaps = 18/253 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +N + L + VF L LR+ +N + C C + L L+ R LG Y KC P
Sbjct: 136 LQHNQIKVLTEEVFIFTPLLSYLRLYDNPWHCTCEMETLISMLQIPRNRNLGNYAKCERP 195
Query: 63 SHIKGQNILDIPEHEFKCSGPVEK--PTGECAAEPSCPHP----CRCADGI-----VDCR 111
+K + + I + E+ P + + P P C + + +DC+
Sbjct: 196 QDLKNKKLRQIKSEQLCNEEEREQLDPKPQVSGRPPVIKPEVDSTLCYNYVFPIQTLDCK 255
Query: 112 EKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
K L KVP +P +L L N I +L PK F + L++++LS N I + AF GL
Sbjct: 256 RKELKKVPNNIPPDIVKLDLSYNKINQLRPKEFEDVHELKKLNLSSNGIEFIDPAAFLGL 315
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL---G 228
L L L+NN+L GV +L+ L+ L + +N + CD ++ +L+ WLK + + G
Sbjct: 316 THLEELDLSNNSLQNFDYGVLEDLYFLKLLWLRDNPWRCDYNIHYLYYWLKHHYNVHYNG 375
Query: 229 LYTKCFAPSHIKG 241
L +C P KG
Sbjct: 376 L--ECKMPEEYKG 386
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 125/300 (41%), Gaps = 45/300 (15%)
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
+DC+E+ L V P+ + L +N I L K F+ +KRL+ +DL +N+ISK+ +A
Sbjct: 65 LDCQERKLVYVLPDWPQDLLHMLLARNKIRILKNKMFSKFKRLKSLDLQQNEISKIESEA 124
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYP 225
F GL LT+L L +N + L + VF L LR+ +N + C C + L L+ R
Sbjct: 125 FFGLNKLTTLLLQHNQIKVLTEEVFIFTPLLSYLRLYDNPWHCTCEMETLISMLQIPRNR 184
Query: 226 RLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKP 285
LG Y KC P +K + + I + C+ RE+ PV KP
Sbjct: 185 NLGNYAKCERPQDLKNKKLRQIKSEQL-CNEEE--------REQLDPKPQVSGRPPVIKP 235
Query: 286 TGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYI 345
+ + P + +DC+ K L KVP +P +L
Sbjct: 236 EVDSTLCYNYVFPIQT----LDCKRKELKKVPNNIPPDIVKLD----------------- 274
Query: 346 SNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N I +L PK F + L+++ L N I + P AF L +
Sbjct: 275 -------------LSYNKINQLRPKEFEDVHELKKLNLSSNGIEFIDPAAFLGLTHLEEL 321
>gi|348526562|ref|XP_003450788.1| PREDICTED: leucine-rich repeat-containing protein 17-like
[Oreochromis niloticus]
Length = 452
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 127/306 (41%), Gaps = 39/306 (12%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +N + + + L RL LR+ +N + C C L L R L+ LG Y KC P
Sbjct: 133 LQHNQMMTASEEILLPLPRLTYLRLYDNPWSCLCPLESLIRKLQLPGNRNLGNYAKCAEP 192
Query: 63 SHIKGQNILDIPEHEFKCS-------GPVEKPTGECAAEP-SCPHPCRC---ADGIVDCR 111
+KGQ + + + C G VE+P CR ++DC
Sbjct: 193 LSLKGQKLKKL-NVDLLCEEDIGPEPGVVERPKPPPKIGKPDATSMCRTYMFPKPLLDCS 251
Query: 112 EKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
K L +P LP + L N I L PK F K L+ ++LS N + + AF GL
Sbjct: 252 NKDLISIPPDLPSDIVRMDLSNNKIKHLKPKHFVLSKDLKLLNLSSNNLHHIDTGAFAGL 311
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL---G 228
L L L+NN+L Y V +L+ LR L + N + CD ++ +L+ WLK +P + G
Sbjct: 312 LYLRELDLSNNSLQYFQYSVLEDLYFLRKLSLDNNPWFCDYNIHYLNYWLKHHPGVHHTG 371
Query: 229 LYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGE 288
L C P KG + D K Y EC D + TG+
Sbjct: 372 LI--CSEPPEFKGWRVADY---------------VKTYNGECPVDKQTEGT-----DTGQ 409
Query: 289 CAAEPS 294
A E S
Sbjct: 410 GAQEQS 415
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 118/314 (37%), Gaps = 52/314 (16%)
Query: 97 CPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLS 156
C + +DC+++ L V P+ L L +N I L FA + +L+ +DL
Sbjct: 51 CLEYTEAGEKYLDCQDRQLTTVMQDWPKDIHHLLLARNRIQVLRDNMFAQFTQLKSLDLQ 110
Query: 157 KNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSW 216
+N IS+V DAF GL L +L L +N + + + L RL LR+ +N + C C L
Sbjct: 111 QNHISRVEDDAFSGLSQLKTLLLQHNQMMTASEEILLPLPRLTYLRLYDNPWSCLCPLES 170
Query: 217 LHRWLK--RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDF 274
L R L+ LG Y KC P +KGQ + + C D
Sbjct: 171 LIRKLQLPGNRNLGNYAKCAEPLSLKGQKLKKLNVDLL-----------------CEEDI 213
Query: 275 HPYNSCPVEKPTGECAAEPSCPHPCRC---ADGIVDCREKGLNKVPILLPEATTELTYMV 331
P +P CR ++DC K L +P LP
Sbjct: 214 GPEPGVVERPKPPPKIGKPDATSMCRTYMFPKPLLDCSNKDLISIPPDLPS--------- 264
Query: 332 SIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITEL 391
I R+D L N I L PK F K L+ + L N++ +
Sbjct: 265 DIVRMD---------------------LSNNKIKHLKPKHFVLSKDLKLLNLSSNNLHHI 303
Query: 392 PPKAFANYKRLRRM 405
AFA LR +
Sbjct: 304 DTGAFAGLLYLREL 317
>gi|320165520|gb|EFW42419.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 694
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 127/308 (41%), Gaps = 18/308 (5%)
Query: 101 CRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQI 160
C C+ IV C K L+ +P +P TT L L N IT +P AFAN L +DL+ NQI
Sbjct: 44 CDCSGTIVACMSKSLSTIPSGIPVTTTSLSLSINQITSIPASAFANLTALTELDLTVNQI 103
Query: 161 SKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW 220
+ ++ +AF GL +LT L L NN+T +P VFA L L L +S N ++
Sbjct: 104 TDISANAFAGLAALTMLFLPGNNITGIPANVFAGLTALLVLNLSGNQLASIPADAF--TG 161
Query: 221 LKRYPRLGLYTKCFAPSHIKGQNILDIPE-HEFKCSGSSMETR-SKIYREECSTDFHPYN 278
L L L + + I D+ SG+ + + + + + + F
Sbjct: 162 LTALQTLNLQSNQI--TSISAAGFADLAALKSLGLSGNRLGSNLANAFTNQSALGF---- 215
Query: 279 SCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDK 338
++ + + + A + + +P A T LT + +D V
Sbjct: 216 ---IDLSNNQITSLLADAFTGLAALNTLFLSNNNITSIP---ANAVTGLTALKYLD-VSG 268
Query: 339 VLLYSYISNNFKRWTNRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFA 397
S+ +++F T + L N T + AF L ++L N T++ AFA
Sbjct: 269 NQFTSFPASSFAGLTALTYLSLSNNQATSISAWAFTGLTALTSLQLSNNQFTDISANAFA 328
Query: 398 NYKRLRRM 405
L +
Sbjct: 329 GLPALMEL 336
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 93/250 (37%), Gaps = 41/250 (16%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL----GLYTKCF 60
L+NNN+T +P L L+ L +S N F S+ Y L +
Sbjct: 242 LSNNNITSIPANAVTGLTALKYLDVSGNQFTSFPASSFAGLTALTYLSLSNNQATSISAW 301
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
A + + L + ++F D +P
Sbjct: 302 AFTGLTALTSLQLSNNQFT-----------------------------DISANAFAGLPA 332
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN 180
L+ EL L N +T +P A + L + LS NQI+ + AF GL +L SL L+
Sbjct: 333 LM-----ELGLAGNQLTSIPTSALLDLTLLNFLSLSANQITSIPASAFTGLTALFSLILS 387
Query: 181 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 240
N LT +P F+ L L L + N F L + L L LY + +P++
Sbjct: 388 RNQLTSIPAAAFSGLTLLNILSLDTNPFT--TLPPGLFQGLPNDIDLSLYYESLSPNNFS 445
Query: 241 -GQNILDIPE 249
G+N + P
Sbjct: 446 FGENTVAPPS 455
>gi|260789097|ref|XP_002589584.1| hypothetical protein BRAFLDRAFT_224612 [Branchiostoma floridae]
gi|229274764|gb|EEN45595.1| hypothetical protein BRAFLDRAFT_224612 [Branchiostoma floridae]
Length = 398
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 118/258 (45%), Gaps = 38/258 (14%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L NN LTY+P G F+ + L L + N +C L Y A S
Sbjct: 100 LYNNRLTYIPRGTFSAVTNLEELWLRGNPIVC----------LDDY----------AFSQ 139
Query: 65 IKGQNILDIPE-HEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+ LDI E HE + + V G + ++ L+ VP L
Sbjct: 140 LPNLRHLDIGELHELRIT-SVNMFVGLSSLVN------------LNMAVASLSSVPFLTH 186
Query: 124 EATTE-LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNN 182
+ E L L N + + K+F+ RL R+ L +I+ V V+AF+GLKSLT L L++N
Sbjct: 187 LSNLEQLDLTGNSLKTISQKSFSGLDRLERLLLVSCRITSVDVNAFEGLKSLTVLNLSHN 246
Query: 183 NLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPR---LGLYTKCFAPSHI 239
+LTYLP+G+F LR + + N + C C ++W+ W++ R KC +P +
Sbjct: 247 SLTYLPEGIFDMTPSLRNMYLQHNPWNCSCDMTWMLEWIRSSERNVTCNDCGKCSSPRRL 306
Query: 240 KGQNILDIPEHEFKCSGS 257
+GQ ++++ + C G
Sbjct: 307 RGQQLVNLTKESLSCPGG 324
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 91 CAAEPSCPHPCRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYK 148
C CP C C+ V C KGL K+P +P++ L L+ N+IT++ FA+Y
Sbjct: 10 CVETLICPRLCNCSGSFENVHCNGKGLTKIPRGIPDSVLYLNLQSNNITKIQRDQFADYV 69
Query: 149 RLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
L+ + L N I+++ AF GLK+L L L NN LTY+P G F+ + L L + N
Sbjct: 70 DLKNLHLGDNLITRIEDGAFNGLKNLHILELYNNRLTYIPRGTFSAVTNLEELWLRGNPI 129
Query: 209 IC 210
+C
Sbjct: 130 VC 131
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 43/116 (37%), Gaps = 32/116 (27%)
Query: 289 CAAEPSCPHPCRCADGI--VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYIS 346
C CP C C+ V C KGL K+P +P++ L
Sbjct: 10 CVETLICPRLCNCSGSFENVHCNGKGLTKIPRGIPDSVLYL------------------- 50
Query: 347 NNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
L+ N+IT++ FA+Y L+ + L N IT + AF K L
Sbjct: 51 -----------NLQSNNITKIQRDQFADYVDLKNLHLGDNLITRIEDGAFNGLKNL 95
>gi|320164611|gb|EFW41510.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 853
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 126/321 (39%), Gaps = 38/321 (11%)
Query: 98 PHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSK 157
P C C+ VDC + L +P +P TT LRL N IT + P AF L + LS
Sbjct: 32 PGVCDCSGTFVDCYGETLTTIPTGIPVDTTMLRLSSNQITGIAPSAFTGLTALTVLSLSY 91
Query: 158 NQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWL 217
NQI+ + V AF GL +LT L L++N +T + F L L L + N I S
Sbjct: 92 NQITSIPVSAFAGLDALTRLDLSSNLITSISASAFPSLTALTELNLQGN-LITSIPASLF 150
Query: 218 H-----RWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECS- 271
RWL + I I + F + + IY +
Sbjct: 151 TGLTALRWLP----------------LSNNQITSIAANAFN----GLSAVTLIYLQTNQI 190
Query: 272 TDFHPYNSCPVEKPTG--ECAAEPSCPHPCRCADGI-----VDCREKGLNKVPILLPEAT 324
TD P + T + + H A G+ +D ++ + +VP A
Sbjct: 191 TDLSPATFTGLAALTELYLMGNQITSIHASTFA-GLTSLENLDLQDNKITEVP---ASAF 246
Query: 325 TELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLE 384
T+L+ + + D + S L+ N IT +P FA+ L + L+
Sbjct: 247 TDLSALTGLTLQDNQITEIPASAFAGLTVLEILNLQGNQITNIPETVFADLTALETLNLQ 306
Query: 385 QNDITELPPKAFANYKRLRRM 405
N IT +P AFA+ LR +
Sbjct: 307 DNQITSIPASAFADLTALRSL 327
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 104/283 (36%), Gaps = 62/283 (21%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
A T L L+ N ITE+P AFA L ++L NQI+ + F L +L +L L +N
Sbjct: 250 SALTGLTLQDNQITEIPASAFAGLTVLEILNLQGNQITNIPETVFADLTALETLNLQDNQ 309
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+T +P FA+L LR+L + +N N
Sbjct: 310 ITSIPASAFADLTALRSLDLQDN------------------------------------N 333
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
I IP F +G S K++ + TD + A
Sbjct: 334 ITSIPASVF--TGLSALNELKLHTNKI-TDLS------------------ASVFASLTAL 372
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQN 362
+++ + + ++ A T LT + +D + + S+ + F T R L N
Sbjct: 373 AVLELQSNQITEIS---ANAFTGLTALTKLD-LSSCQITSFSVDAFTSLTALRDLYLHFN 428
Query: 363 DITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
IT +P AF L + L N IT LP F L +
Sbjct: 429 QITSIPASAFTGLTALYVLILAYNQITSLPTNTFTGLTALNTL 471
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 88/208 (42%), Gaps = 18/208 (8%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L +N +T +P F +L L L + +N + GL +
Sbjct: 233 LQDNKITEVPASAFTDLSALTGLTLQDNQI----------TEIPASAFAGL--TVLEILN 280
Query: 65 IKGQNILDIPEHEFKCSGPVEK---PTGECAAEPSCPHPCRCADGIVDCREKGLNKVPIL 121
++G I +IPE F +E + + P+ A +D ++ + +P
Sbjct: 281 LQGNQITNIPETVFADLTALETLNLQDNQITSIPASAFADLTALRSLDLQDNNITSIPAS 340
Query: 122 L---PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLT 178
+ A EL+L N IT+L FA+ L ++L NQI++++ +AF GL +LT L
Sbjct: 341 VFTGLSALNELKLHTNKITDLSASVFASLTALAVLELQSNQITEISANAFTGLTALTKLD 400
Query: 179 LNNNNLTYLPDGVFAELFRLRTLRISEN 206
L++ +T F L LR L + N
Sbjct: 401 LSSCQITSFSVDAFTSLTALRDLYLHFN 428
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 81/219 (36%), Gaps = 36/219 (16%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L +NN+T +P VF L L L++ N I D S A
Sbjct: 329 LQDNNITSIPASVFTGLSALNELKLHTNK-ITDLSASVFASL-----------TALAVLE 376
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREK---------GL 115
++ I +I + F TG A C+ VD
Sbjct: 377 LQSNQITEISANAF---------TGLTALTKLDLSSCQITSFSVDAFTSLTALRDLYLHF 427
Query: 116 NKVPILLPEATTELR------LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ 169
N++ + A T L L N IT LP F L + LS N I+ ++ + F
Sbjct: 428 NQITSIPASAFTGLTALYVLILAYNQITSLPTNTFTGLTALNTLTLSFNPITSISANTFT 487
Query: 170 GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
L SL L LNNN +T + FA L L+ L +S+N F
Sbjct: 488 DLTSLFFLILNNNQITSISANAFAGLPGLKYLVLSDNPF 526
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%)
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL 184
A L L N IT + F + L + L+ NQI+ ++ +AF GL L L L++N
Sbjct: 467 ALNTLTLSFNPITSISANTFTDLTSLFFLILNNNQITSISANAFAGLPGLKYLVLSDNPF 526
Query: 185 TYLPDGVFAELFRLRTLRIS 204
T LP G+F L +L +S
Sbjct: 527 TTLPPGLFQGLPNGLSLSLS 546
>gi|224093019|ref|XP_002189313.1| PREDICTED: leucine-rich repeat-containing protein 17-like
[Taeniopygia guttata]
Length = 438
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 115/254 (45%), Gaps = 16/254 (6%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +N + L + +F L LR+ +N + C C L L L+ LG Y KC P
Sbjct: 133 LQHNQIKTLSEEIFIYTPSLNYLRLYDNPWHCSCELETLVTMLQVPTNRNLGNYAKCVYP 192
Query: 63 SHIKGQNILDIPEHEFKCSGPVEKPTG--ECAAEPSCP-------HPCRCADGIVDCREK 113
+K Q + I + + P + EP P H ++CR K
Sbjct: 193 IELKNQKLKQIKADQLCSEEDRQDPKNIKQEKPEPVKPEFDSSLCHMYVFPVTTLNCRRK 252
Query: 114 GLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKS 173
L KVP +P +L L N I +L K F + L+ ++L+ N I+ + AF GL +
Sbjct: 253 DLKKVPSNIPPDIAKLDLSNNKIRQLRAKEFEDVSELKILNLNSNGIAYIDPAAFSGLNN 312
Query: 174 LTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL---GLY 230
L L L NN+L GV +L+ L+ L + EN + CD ++ +L WLK + + GL
Sbjct: 313 LEELDLTNNSLQNFEYGVLEDLYFLKILWLRENPWRCDYNIHYLFYWLKHHYNVHYNGL- 371
Query: 231 TKCFAPSHIKGQNI 244
+C P KG ++
Sbjct: 372 -ECKMPEEYKGWSV 384
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 122/300 (40%), Gaps = 47/300 (15%)
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
+DC+E+ L V PE + L +N I +L F+ YK L+ +DL +N ISK+ +A
Sbjct: 62 LDCQERKLVFVAPDWPEDIKHMLLARNRIRKLKNNMFSKYKALKSLDLQQNDISKIETEA 121
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYP 225
F GL LT+L L +N + L + +F L LR+ +N + C C L L L+
Sbjct: 122 FYGLDKLTTLLLQHNQIKTLSEEIFIYTPSLNYLRLYDNPWHCSCELETLVTMLQVPTNR 181
Query: 226 RLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKP 285
LG Y KC P +K Q + I + CS + I +E+ PV KP
Sbjct: 182 NLGNYAKCVYPIELKNQKLKQIKADQL-CSEEDRQDPKNIKQEKPE---------PV-KP 230
Query: 286 TGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYI 345
+ S H ++CR K L KVP +P +L
Sbjct: 231 ----EFDSSLCHMYVFPVTTLNCRRKDLKKVPSNIPPDIAKLD----------------- 269
Query: 346 SNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N I +L K F + L+ + L N I + P AF+ L +
Sbjct: 270 -------------LSNNKIRQLRAKEFEDVSELKILNLNSNGIAYIDPAAFSGLNNLEEL 316
>gi|440899513|gb|ELR50807.1| Carboxypeptidase N subunit 2 [Bos grunniens mutus]
Length = 548
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 124/286 (43%), Gaps = 46/286 (16%)
Query: 3 RTLN--NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCF 60
+TLN N L YLP+ +F L RL+TLR+S N L+ L R L + RLG + F
Sbjct: 172 KTLNLAQNLLAYLPEELFHPLGRLQTLRLSNN------QLASLPRGL--FSRLGSLQELF 223
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCAD---GIVDCREKGLNK 117
+ G +I ++P F +EK + A P A + + L
Sbjct: 224 ----LDGNSISELPPEVFAQLSCLEKLWLQHNAIGHLPGSVFSALPNLTFLSLQGNALQT 279
Query: 118 VPILL---PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSL 174
+P L L L N + +P AFAN L + LS N ++ + F+GLK L
Sbjct: 280 LPAGLFTQSPGLVSLSLSHNQLETVPEAAFANLTSLGSLMLSHNALTHLPAGVFRGLKGL 339
Query: 175 TSLTLNNNNLTYL------------------------PDGVFAELFRLRTLRISENSFIC 210
L L++NNLT L P+G+F L L + N + C
Sbjct: 340 VKLYLSSNNLTVLHPALFQNLSKLELLSLSRNLLTTLPEGIFDTNDNLFNLALYGNPWQC 399
Query: 211 DCHLSWLHRWLKRYPR--LGLYTKCFAPSHIKGQNILDIPEHEFKC 254
DCHL++L WL +Y + T C P+++KGQ + + E + C
Sbjct: 400 DCHLAYLFSWLYQYSDRLFNIQTYCAGPAYLKGQVVPALKEEQLVC 445
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 115/276 (41%), Gaps = 40/276 (14%)
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL 184
+ ++ L N + LP F + L + L N++ + FQ L+ L +L L N L
Sbjct: 122 SLSKFTLNFNMLEALPEGLFQHMDGLESLQLQGNRLQTLPQRLFQPLRCLKTLNLAQNLL 181
Query: 185 TYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNI 244
YLP+ +F L RL+TLR+S N L+ L R L + RLG + F + G +I
Sbjct: 182 AYLPEELFHPLGRLQTLRLSNN------QLASLPRGL--FSRLGSLQELF----LDGNSI 229
Query: 245 LDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADG 304
++P F + + K++ + + P +A P+
Sbjct: 230 SELPPEVF----AQLSCLEKLWLQHNAIG---------HLPGSVFSALPNLT-------- 268
Query: 305 IVDCREKGLNKVPI-LLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQN 362
+ + L +P L ++ ++ +S ++++ V F T+ S L N
Sbjct: 269 FLSLQGNALQTLPAGLFTQSPGLVSLSLSHNQLETV-----PEAAFANLTSLGSLMLSHN 323
Query: 363 DITELPPKAFANYKRLRRIRLEQNDITELPPKAFAN 398
+T LP F K L ++ L N++T L P F N
Sbjct: 324 ALTHLPAGVFRGLKGLVKLYLSSNNLTVLHPALFQN 359
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 24/134 (17%)
Query: 97 CPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELP---------------- 140
CP C C V C ++GL VP+ +P T++ + T +
Sbjct: 22 CPQGCDCFIREVFCSDEGLAAVPLDIPPHATDIIFVETSFTVVGSRAFSSSPNLTKVVFL 81
Query: 141 --------PKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
P AF L+ ++++ S D F L SL+ TLN N L LP+G+F
Sbjct: 82 NTRVCHFRPDAFGGLPGLQDLEITGGNFSNFNADIFSNLISLSKFTLNFNMLEALPEGLF 141
Query: 193 AELFRLRTLRISEN 206
+ L +L++ N
Sbjct: 142 QHMDGLESLQLQGN 155
>gi|155372183|ref|NP_001094702.1| carboxypeptidase N subunit 2 precursor [Bos taurus]
gi|151556892|gb|AAI49123.1| CPN2 protein [Bos taurus]
gi|296491311|tpg|DAA33374.1| TPA: carboxypeptidase N, polypeptide 2 [Bos taurus]
Length = 548
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 124/286 (43%), Gaps = 46/286 (16%)
Query: 3 RTLN--NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCF 60
+TLN N L YLP+ +F L RL+TLR+S N L+ L R L + RLG + F
Sbjct: 172 KTLNLAQNLLAYLPEELFHPLGRLQTLRLSNN------QLASLPRGL--FSRLGSLQELF 223
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCAD---GIVDCREKGLNK 117
+ G +I ++P F +EK + A P A + + L
Sbjct: 224 ----LDGNSISELPPEVFAQLSCLEKLWLQHNAIGHLPGSVFSALPNLTFLSLQGNALQT 279
Query: 118 VPILL---PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSL 174
+P L L L N + +P AFAN L + LS N ++ + F+GLK L
Sbjct: 280 LPAGLFTQSPGLVSLSLSHNQLETVPEAAFANLTSLGSLMLSHNALTHLPAGVFRGLKGL 339
Query: 175 TSLTLNNNNLTYL------------------------PDGVFAELFRLRTLRISENSFIC 210
L L++NNLT L P+G+F L L + N + C
Sbjct: 340 VKLYLSSNNLTVLHPALFQNLSKLELLSLSRNLLTTLPEGIFDTNDNLFNLALYGNPWQC 399
Query: 211 DCHLSWLHRWLKRYPR--LGLYTKCFAPSHIKGQNILDIPEHEFKC 254
DCHL++L WL +Y + T C P+++KGQ + + E + C
Sbjct: 400 DCHLAYLFSWLYQYSDRLFNIQTYCAGPAYLKGQVVPALKEEQLVC 445
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 115/276 (41%), Gaps = 40/276 (14%)
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL 184
+ ++ L N + LP F + L + L N++ + FQ L+ L +L L N L
Sbjct: 122 SLSKFTLNFNMLEALPEGLFQHMDGLESLQLQGNRLQTLPQRLFQPLRCLKTLNLAQNLL 181
Query: 185 TYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNI 244
YLP+ +F L RL+TLR+S N L+ L R L + RLG + F + G +I
Sbjct: 182 AYLPEELFHPLGRLQTLRLSNN------QLASLPRGL--FSRLGSLQELF----LDGNSI 229
Query: 245 LDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADG 304
++P F + + K++ + + P +A P+
Sbjct: 230 SELPPEVF----AQLSCLEKLWLQHNAIG---------HLPGSVFSALPNLT-------- 268
Query: 305 IVDCREKGLNKVPI-LLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQN 362
+ + L +P L ++ ++ +S ++++ V F T+ S L N
Sbjct: 269 FLSLQGNALQTLPAGLFTQSPGLVSLSLSHNQLETV-----PEAAFANLTSLGSLMLSHN 323
Query: 363 DITELPPKAFANYKRLRRIRLEQNDITELPPKAFAN 398
+T LP F K L ++ L N++T L P F N
Sbjct: 324 ALTHLPAGVFRGLKGLVKLYLSSNNLTVLHPALFQN 359
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 24/134 (17%)
Query: 97 CPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELP---------------- 140
CP C C V C ++GL VP+ +P T++ + T +
Sbjct: 22 CPQGCDCFIREVFCSDEGLAAVPLDIPPHATDIIFVETSFTVVGSRAFSSSPNLTKVVFL 81
Query: 141 --------PKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
P AF L+ ++++ S + D F L SL+ TLN N L LP+G+F
Sbjct: 82 NTRVCHFRPDAFGGLPGLQDLEITGGNFSNFSADIFSNLISLSKFTLNFNMLEALPEGLF 141
Query: 193 AELFRLRTLRISEN 206
+ L +L++ N
Sbjct: 142 QHMDGLESLQLQGN 155
>gi|351706047|gb|EHB08966.1| Leucine-rich repeat-containing protein 17 [Heterocephalus glaber]
Length = 442
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 123/261 (47%), Gaps = 28/261 (10%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +N + L + VF + L LR+ +N + C C + L L+ R LG Y KC +P
Sbjct: 137 LQHNQIKVLTEEVFIYMPLLSYLRLYDNPWHCTCEIETLVSMLQVPRNRNLGNYAKCESP 196
Query: 63 SHIKGQNI----------------LDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADG 106
+K + + LD P + PV +P + + P +
Sbjct: 197 QALKNKKLLQLKSEELCNEEEMEQLD-PRPQVSGRPPVIRPEADSTLCHNYVFPIQT--- 252
Query: 107 IVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVD 166
+DC+ K L KVP +P +L L N I +L PK F + L++++LS N I +
Sbjct: 253 -LDCKRKDLKKVPTNIPPDIVKLDLSYNKINQLRPKEFEDVHELKKLNLSSNGIEFIDPA 311
Query: 167 AFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPR 226
AF GL L L L+NN+L GV +L+ L+ L + +N + CD ++ +L+ WLK +
Sbjct: 312 AFLGLTHLEELDLSNNSLQNFDYGVLEDLYFLKLLWLRDNPWRCDYNIHYLYYWLKHHYN 371
Query: 227 L---GLYTKCFAPSHIKGQNI 244
+ GL +C P KG ++
Sbjct: 372 VHYSGL--ECKMPEEYKGWSV 390
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 121/313 (38%), Gaps = 49/313 (15%)
Query: 99 HPCRCA----DGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRID 154
HPC + +DC+ + L V P+ + L +N I L F+ +K+L+ +D
Sbjct: 53 HPCDVYTYLHEKYLDCQARKLVYVLPAWPQDLLHMLLARNKIRILKSNMFSKFKKLKSLD 112
Query: 155 LSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHL 214
L +N+ISK+ +AF GL LT+L L +N + L + VF + L LR+ +N + C C +
Sbjct: 113 LQQNEISKIESEAFFGLNKLTTLLLQHNQIKVLTEEVFIYMPLLSYLRLYDNPWHCTCEI 172
Query: 215 SWLHRWLK--RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECST 272
L L+ R LG Y KC +P K ++ EE
Sbjct: 173 ETLVSMLQVPRNRNLGNYAKCESPQ-------------ALKNKKLLQLKSEELCNEEEME 219
Query: 273 DFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS 332
P P A+ + H +DC+ K L KVP +P +L
Sbjct: 220 QLDPRPQVSGRPPVIRPEADSTLCHNYVFPIQTLDCKRKDLKKVPTNIPPDIVKLD---- 275
Query: 333 IDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELP 392
L N I +L PK F + L+++ L N I +
Sbjct: 276 --------------------------LSYNKINQLRPKEFEDVHELKKLNLSSNGIEFID 309
Query: 393 PKAFANYKRLRRM 405
P AF L +
Sbjct: 310 PAAFLGLTHLEEL 322
>gi|70955640|gb|AAZ16381.1| variable lymphocyte receptor B [Eptatretus stoutii]
Length = 252
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 68/128 (53%), Gaps = 1/128 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C KGL VP +P +TT+L L N + LP F L +DL
Sbjct: 23 ACPSRCSCSGTTVNCNSKGLTSVPSGIPSSTTKLYLNNNQLQSLPNGVFDKLTSLTYLDL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
N++ + F L SLT L L N L +PDGVF L L++L + N + C CH +
Sbjct: 83 QNNKLQSLPHGVFDKLTSLTHLPLLTNLLKSVPDGVFDSLTSLQSLYLESNPWDCSCHGI 142
Query: 215 SWLHRWLK 222
+L RWL+
Sbjct: 143 DYLSRWLQ 150
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C KGL VP +P +TT+L ++ L S + F + T
Sbjct: 23 ACPSRCSCSGTTVNCNSKGLTSVPSGIPSSTTKL-------YLNNNQLQSLPNGVFDKLT 75
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L+ N + LP F L + L N + +P F + L+ +
Sbjct: 76 SLTYLDLQNNKLQSLPHGVFDKLTSLTHLPLLTNLLKSVPDGVFDSLTSLQSL 128
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 8 NNLTYLPDGVFAELFRLRTLRISENSFICDCH-LSWLHRWLK 48
N L +PDGVF L L++L + N + C CH + +L RWL+
Sbjct: 109 NLLKSVPDGVFDSLTSLQSLYLESNPWDCSCHGIDYLSRWLQ 150
>gi|253401313|gb|ACT31438.1| variable lymphocyte receptor B diversity region [Petromyzon
marinus]
Length = 168
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 80/169 (47%), Gaps = 14/169 (8%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC K L VP +P T L L N IT+L P F +L R+DL
Sbjct: 1 ACPSQCSCSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ++ + F L LT L+LN+N L +P G F L L + + N + C C +
Sbjct: 61 DNNQLTVLPAGVFNKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSDI 120
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L RW+ ++P L L++ +CSG++ R+
Sbjct: 121 LYLSRWISQHPWLVF-------------GYLNLDHDSARCSGTNTPVRA 156
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ VDC K L VP +P TT++ Y+ +++ K+ F R T
Sbjct: 1 ACPSQCSCSGTTVDCSGKSLASVPTGIP-TTTQVLYLYD-NQITKL-----EPGVFDRLT 53
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+R L+ N +T LP F +L ++ L N + +P AF N K L +
Sbjct: 54 QLTRLDLDNNQLTVLPAGVFNKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHI 106
>gi|119926484|dbj|BAF43267.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 177
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 70/133 (52%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C K L VP +P T EL L N IT+L P F + L+++ L
Sbjct: 11 ACPARCSCSGTTVNCGGKSLASVPAGIPTTTGELYLHSNQITKLEPGVFDHLANLQQLHL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ+S + V F L LT L L NN L +P G F L L + +S N + C C +
Sbjct: 71 GGNQLSALPVGVFDKLTQLTHLVLYNNQLKSIPRGAFDNLKSLTHIWLSNNPWDCACSDI 130
Query: 215 SWLHRWLKRYPRL 227
+L RW+ ++P +
Sbjct: 131 LYLSRWISQHPGV 143
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKV--LLYSYISNNFKR 351
+CP C C+ V+C K L VP +P T EL Y+ S +++ K+ ++ +++N
Sbjct: 11 ACPARCSCSGTTVNCGGKSLASVPAGIPTTTGEL-YLHS-NQITKLEPGVFDHLAN---- 64
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L N ++ LP F +L + L N + +P AF N K L +
Sbjct: 65 --LQQLHLGGNQLSALPVGVFDKLTQLTHLVLYNNQLKSIPRGAFDNLKSLTHI 116
>gi|253401317|gb|ACT31439.1| variable lymphocyte receptor B diversity region [Petromyzon
marinus]
Length = 168
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 80/169 (47%), Gaps = 14/169 (8%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC K L VP +P T L L N IT+L P F +L R+DL
Sbjct: 1 ACPSQCSCSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ++ + F L LT L+LN+N L +P G F L L + + N + C C +
Sbjct: 61 DNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSDI 120
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L RW+ ++P L L++ +CSG++ R+
Sbjct: 121 LYLSRWISQHPWLVF-------------GYLNLDHDSARCSGTNTPVRA 156
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ VDC K L VP +P TT++ Y+ +++ K+ F R T
Sbjct: 1 ACPSQCSCSGTTVDCSGKSLASVPTGIP-TTTQVLYLYD-NQITKL-----EPGVFDRLT 53
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+R L+ N +T LP F +L ++ L N + +P AF N K L +
Sbjct: 54 QLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHI 106
>gi|241913319|pdb|3G39|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor
Length = 170
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 80/169 (47%), Gaps = 14/169 (8%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC K L VP +P T L L N IT+L P F +L R+DL
Sbjct: 2 ACPSQCSCSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDL 61
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ++ + F L LT L+LN+N L +P G F L L + + N + C C +
Sbjct: 62 DNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSDI 121
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L RW+ ++P L L++ +CSG++ R+
Sbjct: 122 LYLSRWISQHPGLVF-------------GYLNLDPDSARCSGTNTPVRA 157
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ VDC K L VP +P TT++ Y+ +++ K+ F R T
Sbjct: 2 ACPSQCSCSGTTVDCSGKSLASVPTGIP-TTTQVLYLYD-NQITKL-----EPGVFDRLT 54
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+R L+ N +T LP F +L ++ L N + +P AF N K L +
Sbjct: 55 QLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHI 107
>gi|241913320|pdb|3G3A|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
gi|241913322|pdb|3G3A|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
gi|241913324|pdb|3G3A|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
gi|241913326|pdb|3G3A|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
Length = 178
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 81/173 (46%), Gaps = 14/173 (8%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP C C+ VDC K L VP +P T L L N IT+L P F +L
Sbjct: 6 ARGSACPSQCSCSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLT 65
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICD 211
R+DL NQ++ + F L LT L+LN+N L +P G F L L + + N + C
Sbjct: 66 RLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 125
Query: 212 CH-LSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
C + +L RW+ ++P L L++ +CSG++ R+
Sbjct: 126 CSDILYLSRWISQHPGLVF-------------GYLNLDPDSARCSGTNTPVRA 165
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNF 349
A +CP C C+ VDC K L VP +P TT++ Y+ +++ K+ F
Sbjct: 6 ARGSACPSQCSCSGTTVDCSGKSLASVPTGIP-TTTQVLYLYD-NQITKLE-----PGVF 58
Query: 350 KRWTNRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R T +R L+ N +T LP F +L ++ L N + +P AF N K L +
Sbjct: 59 DRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHI 115
>gi|253401302|gb|ACT31435.1| variable lymphocyte receptor B diversity region [Petromyzon
marinus]
Length = 168
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 80/169 (47%), Gaps = 14/169 (8%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC K L VP +P T L L N IT+L P F +L R+DL
Sbjct: 1 ACPSQCSCSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ++ + F L LT L+LN+N L +P G F L L + + N + C C +
Sbjct: 61 DNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSDI 120
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L RW+ ++P L L++ +CSG++ R+
Sbjct: 121 LYLSRWISQHPGLVF-------------GYLNLDPDSARCSGTNTPVRA 156
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ VDC K L VP +P TT++ Y+ +++ K+ F R T
Sbjct: 1 ACPSQCSCSGTTVDCSGKSLASVPTGIP-TTTQVLYLYD-NQITKL-----EPGVFDRLT 53
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+R L+ N +T LP F +L ++ L N + +P AF N K L +
Sbjct: 54 QLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHI 106
>gi|33320664|gb|AAQ05970.1|AF484235_1 peroxidasin [Aedes aegypti]
Length = 1528
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 86/189 (45%), Gaps = 26/189 (13%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A CP C C V C ++ L+K+P +P T + L N I E+P AFAN L
Sbjct: 29 GATMGCPQSCTCQQRTVRCVKQQLDKIP-EMPLDTNMVDLRFNRIHEVPTDAFANLAHLH 87
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLN------------------------NNNLTYL 187
+ LS+NQI ++ AF+ L SL L LN N + +
Sbjct: 88 TVFLSENQIVRIQPGAFRQLPSLKHLYLNKNRIATIEPGAFDALDRLQNLMLYGNQIKRI 147
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT-KCFAPSHIKGQNILD 246
P+G F L L+ R+ +N CDC L W +W++ R T +C P + +N+ D
Sbjct: 148 PEGAFGALPSLKRFRLDDNPLECDCSLLWFRKWIQGLGRSAQATGECAVPETLARRNVAD 207
Query: 247 IPEHEFKCS 255
+ + +F C+
Sbjct: 208 LMDSDFHCT 216
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 7/141 (4%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT-KCFAPS 63
L N + +P+G F L L+ R+ +N CDC L W +W++ R T +C P
Sbjct: 139 LYGNQIKRIPEGAFGALPSLKRFRLDDNPLECDCSLLWFRKWIQGLGRSAQATGECAVPE 198
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+ +N+ D+ + +F C+ P E EP + C+ G + I+
Sbjct: 199 TLARRNVADLMDSDFHCTKP------EIVTEPRDIEISYGQTAVFSCKAGGDPRPEIVWM 252
Query: 124 EATTELRLEQNDITELPPKAF 144
E+ + I LP +
Sbjct: 253 LNGNEIHSDDTRINVLPDGSL 273
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 9/117 (7%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNF 349
A CP C C V C ++ L+K+P + + T MV + R +++ + ++ F
Sbjct: 29 GATMGCPQSCTCQQRTVRCVKQQLDKIPEMPLD-----TNMVDL-RFNRI--HEVPTDAF 80
Query: 350 KRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L +N I + P AF L+ + L +N I + P AF RL+ +
Sbjct: 81 ANLAHLHTVFLSENQIVRIQPGAFRQLPSLKHLYLNKNRIATIEPGAFDALDRLQNL 137
>gi|253401325|gb|ACT31441.1| variable lymphocyte receptor B diversity region [Petromyzon
marinus]
Length = 168
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC K L VP +P T L L N IT+L P F +L R+DL
Sbjct: 1 ACPSQCSCSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ++ + F L LT L+LN+N L +P G F L L + + N + C C +
Sbjct: 61 DNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSDI 120
Query: 215 SWLHRWLKRYPRL 227
+L RW+ ++P L
Sbjct: 121 LYLSRWISQHPGL 133
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ VDC K L VP +P TT++ Y+ +++ K+ F R T
Sbjct: 1 ACPSQCSCSGTTVDCSGKSLASVPTGIP-TTTQVLYLYD-NQITKL-----EPGVFDRLT 53
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+R L+ N +T LP F +L ++ L N + +P AF N K L +
Sbjct: 54 QLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHI 106
>gi|432863543|ref|XP_004070119.1| PREDICTED: leucine-rich repeat-containing protein 17-like [Oryzias
latipes]
Length = 465
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 129/295 (43%), Gaps = 35/295 (11%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +N LT L D + LR LR++ N + C C L L R L+ LG +C P
Sbjct: 148 LQHNRLTTLSDEALISMPNLRDLRLNGNPWKCLCPLESLIRTLQVPSNRNLGNNARCAEP 207
Query: 63 SHIKGQNILDI-PEHEFKCSGPVEKPTGECAA--EP----------SCPHPCRCADGIVD 109
+ +K + + + PE K + TG + EP S H +D
Sbjct: 208 TWLKNRKLKTVDPELLCKDVEAISHRTGNNTSTFEPIPLRGKADTASVCHTYLFPHMRMD 267
Query: 110 CREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ 169
C ++GL +VP +P+ ++ L N I L K F LR ++LS N + + +
Sbjct: 268 CSKRGLTEVPSGIPDDVVQVDLSHNSIRRLRLKDFQGASGLRILNLSSNSMEHIDPGSLF 327
Query: 170 GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL-- 227
GL L L L++NNL +L GV +L+ L L++ N ++C+ + ++ WL+ +P +
Sbjct: 328 GLLHLQELDLSDNNLHFLQYGVLEDLYFLSRLKLGGNPWVCNYSIHYMVYWLRLHPAVKH 387
Query: 228 -GLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCP 281
GL+ C +PS G+ + E Y EC D P + P
Sbjct: 388 SGLW--CHSPSEFAGERV---------------EEYVHSYNRECPKDRQPSRTDP 425
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 132/321 (41%), Gaps = 29/321 (9%)
Query: 93 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELR------LEQNDITELPPKAFAN 146
PSC +DC+E+ L +P A + R L N I L AF
Sbjct: 60 VSPSCSELKESGMIFMDCQERQLT----FIPPANSWFRKPRHLLLALNQIKILQDGAFLG 115
Query: 147 YKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
Y L +DL +NQI +V AFQGL L +L L +N LT L D + LR LR++ N
Sbjct: 116 YDSLISLDLQQNQIFQVEEGAFQGLTRLKTLLLQHNRLTTLSDEALISMPNLRDLRLNGN 175
Query: 207 SFICDCHLSWLHRWLK--RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSK 264
+ C C L L R L+ LG +C P+ +K + + + + E C +E S
Sbjct: 176 PWKCLCPLESLIRTLQVPSNRNLGNNARCAEPTWLKNRKLKTV-DPELLC--KDVEAISH 232
Query: 265 IYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEAT 324
ST F P P A S H +DC ++GL +VP +P+
Sbjct: 233 RTGNNTST-FEPI-------PLRGKADTASVCHTYLFPHMRMDCSKRGLTEVPSGIPDDV 284
Query: 325 TELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLE 384
++ +S + + ++ L + + R N L N + + P + L+ + L
Sbjct: 285 VQVD--LSHNSIRRLRLKDFQGASGLRILN----LSSNSMEHIDPGSLFGLLHLQELDLS 338
Query: 385 QNDITELPPKAFANYKRLRRM 405
N++ L + L R+
Sbjct: 339 DNNLHFLQYGVLEDLYFLSRL 359
>gi|81175378|gb|ABB59028.1| variable lymphocyte receptor B [Eptatretus stoutii]
Length = 251
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 69/129 (53%), Gaps = 1/129 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C KGL VP +P +TT+L L QN + LP F +L ++L
Sbjct: 23 ACPSRCSCSGTEVNCWNKGLTSVPSGIPSSTTKLYLHQNKLQSLPSGVFDKLTKLTHLEL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
NQ+ + F L LT+L L+ N L +PDGVF L L+ + + N + C C +
Sbjct: 83 QGNQLQSLPHGVFDKLTKLTTLALSTNQLKSVPDGVFDSLTSLQKIYLFSNPWDCSCPRI 142
Query: 215 SWLHRWLKR 223
+L RWL +
Sbjct: 143 DYLSRWLNK 151
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C KGL VP +P +TT+L + + L S S F + T
Sbjct: 23 ACPSRCSCSGTEVNCWNKGLTSVPSGIPSSTTKL-------YLHQNKLQSLPSGVFDKLT 75
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L+ N + LP F +L + L N + +P F + L+++
Sbjct: 76 KLTHLELQGNQLQSLPHGVFDKLTKLTTLALSTNQLKSVPDGVFDSLTSLQKI 128
>gi|449509899|ref|XP_004176835.1| PREDICTED: carboxypeptidase N subunit 2 [Taeniopygia guttata]
Length = 498
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 125/290 (43%), Gaps = 54/290 (18%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-----RLGLYTKC 59
L+ N L LP+G+ A L LR L++S+N L R P LG T+
Sbjct: 137 LSQNALAELPEGLLAPLVALRVLKLSDN-------------LLARVPPGAFRALGQLTEL 183
Query: 60 FAPSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCAD---GIVDCREKGLN 116
+ G + ++P F G + + + A S ++ L
Sbjct: 184 ----RLDGNGLEELPPGIFSGLGALRRLQLQHNALGSLAPDIFTGLLNLTVLSLEGNKLA 239
Query: 117 KVPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKS 173
VP +L T L L +N + LP + FAN L +DLS N I + FQGL
Sbjct: 240 AVPAILFTGTPGLLHLSLARNQLETLPRELFANLSVLETLDLSHNAIDHLPTGVFQGLAG 299
Query: 174 LTSLTLNNNNLTYLPD------------------------GVFAELFRLRTLRISENSFI 209
LT L L++NNL+ LP G+F L + +++N +
Sbjct: 300 LTELQLSHNNLSRLPARLLAGLPLLTVLLLDHNRLARLPPGLFDANDELVRVGLADNPWG 359
Query: 210 CDCHLSWLHRWLKRYPRLGLYTKCFA--PSHIKGQNILDIPEHEFKCSGS 257
CDCHLS+L RWL+ + ++ + F P+ ++GQ++L++ + +C G+
Sbjct: 360 CDCHLSYLLRWLQSFAEPLIHNQAFCANPAALQGQSLLEVSRGQLECPGA 409
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L QN + ELP A LR + LS N +++V AF+ L LT L L+ N L LP
Sbjct: 135 LDLSQNALAELPEGLLAPLVALRVLKLSDNLLARVPPGAFRALGQLTELRLDGNGLEELP 194
Query: 189 DGVFAELFRLRTLRISENSF 208
G+F+ L LR L++ N+
Sbjct: 195 PGIFSGLGALRRLQLQHNAL 214
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 98/270 (36%), Gaps = 46/270 (17%)
Query: 134 NDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFA 193
N I L P F RL+ + LS N+I + F+ L+ L +L L+ N L LP+G+ A
Sbjct: 92 NTIRTLQPGLFTASCRLQDLSLSGNRIEALPPGIFRPLRRLQALDLSQNALAELPEGLLA 151
Query: 194 ELFRLRTLRISENSFICDCHLSWLHRWLKRYP-----RLGLYTKCFAPSHIKGQNILDIP 248
L LR L++S+N L R P LG T+ + G + ++P
Sbjct: 152 PLVALRVLKLSDN-------------LLARVPPGAFRALGQLTEL----RLDGNGLEELP 194
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
F G+ R + P + T ++
Sbjct: 195 PGIFSGLGA---LRRLQLQHNALGSLAPDIFTGLLNLT------------------VLSL 233
Query: 309 REKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELP 368
L VP +L T L ++ S+ R L + N + L N I LP
Sbjct: 234 EGNKLAAVPAILFTGTPGLLHL-SLARNQLETLPRELFANLSVL--ETLDLSHNAIDHLP 290
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFAN 398
F L ++L N+++ LP + A
Sbjct: 291 TGVFQGLAGLTELQLSHNNLSRLPARLLAG 320
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 54/133 (40%), Gaps = 14/133 (10%)
Query: 108 VDCREKGLNKVP--ILLP-EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVA 164
+D + L ++P +L P A L+L N + +PP AF +L + L N + ++
Sbjct: 135 LDLSQNALAELPEGLLAPLVALRVLKLSDNLLARVPPGAFRALGQLTELRLDGNGLEELP 194
Query: 165 VDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICD-----------CH 213
F GL +L L L +N L L +F L L L + N H
Sbjct: 195 PGIFSGLGALRRLQLQHNALGSLAPDIFTGLLNLTVLSLEGNKLAAVPAILFTGTPGLLH 254
Query: 214 LSWLHRWLKRYPR 226
LS L+ PR
Sbjct: 255 LSLARNQLETLPR 267
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 108/309 (34%), Gaps = 72/309 (23%)
Query: 127 TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKS------------- 173
T+L N+I EL P AF L +++S N + V++ GL S
Sbjct: 37 TKLVFINNNIQELEPGAFQGLPSLTELEVSGNPLPAVSLGMLAGLTSLSKLSLSANTIRT 96
Query: 174 -----------LTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK 222
L L+L+ N + LP G+F L RL+ L +S+N+ L
Sbjct: 97 LQPGLFTASCRLQDLSLSGNRIEALPPGIFRPLRRLQALDLSQNA-------------LA 143
Query: 223 RYPRLGLYTKCFAPSHIK-GQNILD-IPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC 280
P GL A +K N+L +P F+ G E R E
Sbjct: 144 ELPE-GLLAPLVALRVLKLSDNLLARVPPGAFRALGQLTELRLDGNGLE----------- 191
Query: 281 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGL--NKVPILLPEATTELTYM--VSIDRV 336
E P G G+ R L N + L P+ T L + +S++
Sbjct: 192 --ELPPG-------------IFSGLGALRRLQLQHNALGSLAPDIFTGLLNLTVLSLEGN 236
Query: 337 DKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
+ + + + S L +N + LP + FAN L + L N I LP F
Sbjct: 237 KLAAVPAILFTGTPGLLHLS--LARNQLETLPRELFANLSVLETLDLSHNAIDHLPTGVF 294
Query: 397 ANYKRLRRM 405
L +
Sbjct: 295 QGLAGLTEL 303
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 110/296 (37%), Gaps = 22/296 (7%)
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSL 174
+ ++P LP + T L D+ + + L ++ N I ++ AFQGL SL
Sbjct: 1 MREIPKGLPGSATHLFFVGTDLGSIHSGDLGSSTTLTKLVFINNNIQELEPGAFQGLPSL 60
Query: 175 TSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKC- 233
T L ++ N L + G+ A L L L +S N+ R + GL+T
Sbjct: 61 TELEVSGNPLPAVSLGMLAGLTSLSKLSLSANTI--------------RTLQPGLFTASC 106
Query: 234 -FAPSHIKGQNILDIPEHEFKC--SGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECA 290
+ G I +P F+ +++ E P + V K +
Sbjct: 107 RLQDLSLSGNRIEALPPGIFRPLRRLQALDLSQNALAELPEGLLAPLVALRVLKLSDNLL 166
Query: 291 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFK 350
A P R + + R G N + L P + L + + ++ L S + F
Sbjct: 167 AR-VPPGAFRALGQLTELRLDG-NGLEELPPGIFSGLGALRRL-QLQHNALGSLAPDIFT 223
Query: 351 RWTNRS-RRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N + LE N + +P F L + L +N + LP + FAN L +
Sbjct: 224 GLLNLTVLSLEGNKLAAVPAILFTGTPGLLHLSLARNQLETLPRELFANLSVLETL 279
>gi|260830527|ref|XP_002610212.1| hypothetical protein BRAFLDRAFT_121505 [Branchiostoma floridae]
gi|229295576|gb|EEN66222.1| hypothetical protein BRAFLDRAFT_121505 [Branchiostoma floridae]
Length = 1400
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 112/449 (24%), Positives = 176/449 (39%), Gaps = 67/449 (14%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTK--CFAP 62
L+ N L+ L F+EL RL +L I CDC L W+K + C +P
Sbjct: 104 LSRNPLSTLAPDTFSELRRLDSLDIRGLELECDCRLRGFFHWIKTTGVMVSLDDVICVSP 163
Query: 63 SHIKGQNILDIPEHEFKCSGPVEKPTGECA----AEPSCPHPCRCADGIVDCREKGLNKV 118
+ + + +P+ CS T + +CP C+C G V C + L V
Sbjct: 164 PFLYQRKLEWVPQEALLCSNQGSLLTAYTMLPMYEDITCPELCQCDAGKVTCSGQELPVV 223
Query: 119 PILLPEATTELRLEQNDITELPPKAFA------------------------NYKRLRRID 154
P LP +L L N IT L A + N RL+ +D
Sbjct: 224 PHSLPIDIIQLDLSNNIITNLGNHALSQMRYLQVLNLHSNRFPKVSNMDMKNLGRLQSLD 283
Query: 155 LSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENS----FIC 210
LS+NQIS V AF G L L L+ NN++ +P A L++LRTL +S N+ F
Sbjct: 284 LSENQISDVEEQAFMGCPDLLHLYLSGNNMSSVPANALAPLWKLRTLDMSFNNIQALFRE 343
Query: 211 D-CHLSWLHRWLKRYPRLG----LYTKCFAPSH----IKGQNILDIPEHEFKCSGSSMET 261
D +SWL + G + + P H NIL + F+ +
Sbjct: 344 DFAGMSWLQKQAVASDNGGRTCHAHDTHYVPGHADLLADSNNILSVDAEAFQ----DLPD 399
Query: 262 RSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD--GIVDCREKGLNKVPIL 319
++ N+ P A PS + ++D R+ P+
Sbjct: 400 LEALFLS---------NNYLRAVPREALTALPSLSTLVLSGNKLTVLDTRDFSGFSRPLN 450
Query: 320 LPEATTELTYMVSIDRVDKVLLYSY--ISNNFKRWTN-RSRRLEQNDITELPPKAFANYK 376
L + + I+ +D +L + +S F N + + N I + P AF
Sbjct: 451 LALSHNK------IETLDTEVLTNIGNLSMAFVPMLNLKVLNMSHNFIQTIHPLAFHGLM 504
Query: 377 RLRRIRLEQNDITELPPKAFANYKRLRRM 405
RL + L+ N+++++P +AF + RLR +
Sbjct: 505 RLISLNLDNNNLSKVPFEAFESLPRLRHL 533
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 91/238 (38%), Gaps = 35/238 (14%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKR----YPRLGLYTKCF 60
L+ N + + F L L+ + ++EN CDC++ L Y +C
Sbjct: 559 LDANMIESISINAFHGLEELQNVSVTENPLECDCNMRKFMESLDNLSWDYSIEVENMRCS 618
Query: 61 APSHIKGQNILDIPEHEFKCS----GPVEKPTGECAAEPS---CPHPCRCADGIVDCREK 113
P G N+ + +F C + + E CP C + +
Sbjct: 619 GPPVFAGWNVYHLVADDFVCGRDKQAEIAATFQQMVQEDEFFPCPESFTCDGLVATSVGR 678
Query: 114 GLNKVPILLPEATTELRLEQNDITELPPKAFANYKR------------------------ 149
GL VP+ LP TT L L N IT++P A R
Sbjct: 679 GLTVVPLSLPLNTTALVLSNNSITDIPAGAMKELARLQYLQLDHNKIRTITSRSLKTVPL 738
Query: 150 LRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENS 207
L+ +DLS N + ++ AF G+ LTSL L+NN L +P L LR LRI N+
Sbjct: 739 LKVLDLSNNMLDQIDPGAFSGIPKLTSLLLSNNKLKTVPVSALKSLPNLRELRIGNNN 796
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 116/300 (38%), Gaps = 41/300 (13%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L+ N+++++P +AF + RLR + L N I V +AF L S+ + L+ N + +
Sbjct: 509 LNLDNNNLSKVPFEAFESLPRLRHLSLRGNSIINVPGEAFTTLTSIREIFLDANMIESIS 568
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKR----YPRLGLYTKCFAPSHIKGQNI 244
F L L+ + ++EN CDC++ L Y +C P G N+
Sbjct: 569 INAFHGLEELQNVSVTENPLECDCNMRKFMESLDNLSWDYSIEVENMRCSGPPVFAGWNV 628
Query: 245 LDIPEHEFKCSGSSMETRSKIYREECSTD-FHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
+ +F C + +++ D F P CP C
Sbjct: 629 YHLVADDFVCGRDKQAEIAATFQQMVQEDEFFP------------------CPESFTCDG 670
Query: 304 GIVDCREKGLNKVPILLPEATTELTY---------MVSIDRVDKVLLYSYISNNFKRWTN 354
+ +GL VP+ LP TT L ++ + ++ N + T+
Sbjct: 671 LVATSVGRGLTVVPLSLPLNTTALVLSNNSITDIPAGAMKELARLQYLQLDHNKIRTITS 730
Query: 355 RSRR---------LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RS + L N + ++ P AF+ +L + L N + +P A + LR +
Sbjct: 731 RSLKTVPLLKVLDLSNNMLDQIDPGAFSGIPKLTSLLLSNNKLKTVPVSALKSLPNLREL 790
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 127/355 (35%), Gaps = 92/355 (25%)
Query: 118 VPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSL 177
+PIL T L N I +P +FA LR++ L +I + A +GL L L
Sbjct: 1 MPIL-----TTLDXSHNQIITVPDDSFAETPNLRKLILKDGEIVSIHPRALRGLSRLEFL 55
Query: 178 TLNNNNLTYLPDGV---------------------------------------------- 191
L +NNLT +P +
Sbjct: 56 NLQDNNLTDVPVTLEHTPNVETLLLDRSAIRTVHPWDLYPLQKLKHLHLSRNPLSTLAPD 115
Query: 192 -FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTK--CFAPSHIKGQNILDIP 248
F+EL RL +L I CDC L W+K + C +P + + + +P
Sbjct: 116 TFSELRRLDSLDIRGLELECDCRLRGFFHWIKTTGVMVSLDDVICVSPPFLYQRKLEWVP 175
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
+ CS + Y P+ + + +CP C+C G V C
Sbjct: 176 QEALLCSNQ-------------GSLLTAYTMLPMYE-------DITCPELCQCDAGKVTC 215
Query: 309 REKGLNKVPILLPEATTELTYMVSI---------DRVDKVLLYSYISNNFKRWTN----- 354
+ L VP LP +L +I ++ + + + SN F + +N
Sbjct: 216 SGQELPVVPHSLPIDIIQLDLSNNIITNLGNHALSQMRYLQVLNLHSNRFPKVSNMDMKN 275
Query: 355 ----RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+S L +N I+++ +AF L + L N+++ +P A A +LR +
Sbjct: 276 LGRLQSLDLSENQISDVEEQAFMGCPDLLHLYLSGNNMSSVPANALAPLWKLRTL 330
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 110/293 (37%), Gaps = 29/293 (9%)
Query: 141 PKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRT 200
PKA L I L N+I+ ++ L+ + + +N L L VF+ +R
Sbjct: 920 PKALRKLTTLSEISLPGNKITDISARDLPSLRGPAVIDIRDNRLEQLDPDVFSSTQHVR- 978
Query: 201 LRISENSFICDCHLSWLHRWLKRY----PRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
L ++ N + CDC L L W++ + + C +P ++G ++D+P +F+C
Sbjct: 979 LDLAGNPWRCDCDLLPLRNWMEDHEDYEASINPQPTCASPVLLEGHPMMDVPTEDFRCPN 1038
Query: 257 SSME-----TRSKIYREECSTDFHPYNSCPVEKPTG-----------ECA-------AEP 293
TR+ +Y + + + CA + P
Sbjct: 1039 RETVDQNCWTRTTLYVYDGGVTLQGQQDITMRRTVSMVVLAVLLEIISCANLTRAAWSPP 1098
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
CP C C +V + L V P T + V+ L I + +
Sbjct: 1099 DCPRQCSCGGQVVFPLYEQLRTVQCFRPSETVQFPPDTQSINVEFSPLRQVIPEDIFQGL 1158
Query: 354 NRSRRLEQND-ITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N ++ +T +P F N +LR + + + + +LP F + + L ++
Sbjct: 1159 NDLVSVKLTARLTTVPQGLFRNLTQLRVLWIREFRVRQLPIGIFDSLRELEQI 1211
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 88/218 (40%), Gaps = 33/218 (15%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
L+NN++T +P G EL RL+ L++ N + R LK P L
Sbjct: 695 VLSNNSITDIPAGAMKELARLQYLQLDHNKI-----RTITSRSLKTVPLL---------- 739
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+LD+ + P G + P + + L +P L
Sbjct: 740 -----KVLDLSNNMLDQIDP-----GAFSGIPKLTSLLLSNNKLKTVPVSALKSLPNL-- 787
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
ELR+ N++ L ++ +LR +DLS N + + V A GL L +L L+N
Sbjct: 788 ---RELRIGNNNVKSLD-LPLPDHSKLRLLDLSGNCLESIRVTALTGLPMLRALNLSNTC 843
Query: 184 LTYLPDGVFAELFRLRTLRISEN--SFICDCHLSWLHR 219
L +P + L LR L +S N +FI L+ L +
Sbjct: 844 LDNVPTTQLSLLHNLRALDLSRNNITFIAGRALAGLKQ 881
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 90/252 (35%), Gaps = 69/252 (27%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRY----PRLGLYTKCF 60
+ +N L L VF+ +R L ++ N + CDC L L W++ + + C
Sbjct: 958 IRDNRLEQLDPDVFSSTQHVR-LDLAGNPWRCDCDLLPLRNWMEDHEDYEASINPQPTCA 1016
Query: 61 APSHIKGQNILDIPEHEFKC-------------------SGPVEKPTGE----------- 90
+P ++G ++D+P +F+C G V +
Sbjct: 1017 SPVLLEGHPMMDVPTEDFRCPNRETVDQNCWTRTTLYVYDGGVTLQGQQDITMRRTVSMV 1076
Query: 91 ----------CA-------AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQ 133
CA + P CP C C +V + L V P T + +
Sbjct: 1077 VLAVLLEIISCANLTRAAWSPPDCPRQCSCGGQVVFPLYEQLRTVQCFRPSETVQFPPDT 1136
Query: 134 NDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFA 193
I + LR++ + D FQGL L S+ L LT +P G+F
Sbjct: 1137 QSIN-------VEFSPLRQV---------IPEDIFQGLNDLVSVKL-TARLTTVPQGLFR 1179
Query: 194 ELFRLRTLRISE 205
L +LR L I E
Sbjct: 1180 NLTQLRVLWIRE 1191
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 81/202 (40%), Gaps = 36/202 (17%)
Query: 115 LNKVPILLPEATTELR---LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L VP L T+LR + + + +LP F + + L +I + + IS++ + F L
Sbjct: 1170 LTTVPQGLFRNLTQLRVLWIREFRVRQLPIGIFDSLRELEQIWIEETTISRLRGNTFSNL 1229
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSW-LHRWLKRYPRLGL- 229
L + LNNN L LP +F+ L L + N F L + + W+ LG+
Sbjct: 1230 NKLMFVHLNNNQLARLPANLFSSQPALALLHLQWNPFQT---LDYRVFTWMTELRELGVD 1286
Query: 230 --YTKCFAPSHIKGQNILDIPEHEFKCS--------------------GSSMETRSKIYR 267
+ + P N++++P+ FK + + + + Y
Sbjct: 1287 SHHMISWLP------NLMNLPKRHFKNLEILVTYLLNEDRYDSIRVEWDTMVYSHGQWYF 1340
Query: 268 EECSTDFHPYNSCPVEKPTGEC 289
EC D + +C + T EC
Sbjct: 1341 GECPPDACEFGACSISYQTPEC 1362
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 55/142 (38%), Gaps = 18/142 (12%)
Query: 111 REKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQG 170
R L +P+L L L + +P + LR +DLS+N I+ +A A G
Sbjct: 824 RVTALTGLPML-----RALNLSNTCLDNVPTTQLSLLHNLRALDLSRNNITFIAGRALAG 878
Query: 171 LKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY 230
LK L L L N++T + + F L L + + N L+R P+
Sbjct: 879 LKQLRELILTGNSITRVQNLAFKGLTHLYRVSFASNR-------------LRRIPKALRK 925
Query: 231 TKCFAPSHIKGQNILDIPEHEF 252
+ + G I DI +
Sbjct: 926 LTTLSEISLPGNKITDISARDL 947
>gi|149047238|gb|EDL99907.1| G protein-coupled receptor 125 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 1228
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 79/177 (44%), Gaps = 10/177 (5%)
Query: 89 GECAAEPSCPHPCRC--------ADGIVDCREKGLNKV--PILLPEATTELRLEQNDITE 138
G A C H R A+G V C L +V P LP T L L N I+E
Sbjct: 22 GAVALPAGCKHDGRARGTGRAAGAEGKVVCSSLELAQVLPPDTLPNRTVTLILSNNKISE 81
Query: 139 LPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRL 198
L +F+ L R+DL N IS++A AF GL SL L L NN + L VF L L
Sbjct: 82 LKNGSFSGLSLLERLDLRNNLISRIAPGAFWGLSSLKRLDLTNNRIGCLNADVFRGLTNL 141
Query: 199 RTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
L +CDC++ W+HRW+K T+C P ++ Q + + + C
Sbjct: 142 VRLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCVYPKSLQAQPVTGVKQELLTCG 198
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 39/84 (46%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L NN + L VF L L L +CDC++ W+HRW+K T+C P
Sbjct: 122 LTNNRIGCLNADVFRGLTNLVRLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCVYPKS 181
Query: 65 IKGQNILDIPEHEFKCSGPVEKPT 88
++ Q + + + C P+E P+
Sbjct: 182 LQAQPVTGVKQELLTCGPPLELPS 205
>gi|70955579|gb|AAZ16351.1| variable lymphocyte receptor B [Eptatretus burgeri]
Length = 250
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ + C KGL P +P TT L L+ N + +P F +L R+DL
Sbjct: 23 ACPSRCSCSGTEIRCISKGLTSFPSGIPSRTTVLYLDNNKLQSIPSGVFDKLTQLTRLDL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
+NQ+ + + F L L+ L L +N L +PDG+F L L++L + N + C CH +
Sbjct: 83 DRNQLKSLPMGIFDKLTKLSHLELYSNQLKSVPDGIFDRLTSLQSLYVYNNPWDCSCHGV 142
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKI 265
+L RWL+ P Y KCSGS RS I
Sbjct: 143 DYLSRWLQNNPNKEKYDSA-------------------KCSGSGKPVRSII 174
Score = 44.7 bits (104), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ + C KGL P +P TT L +D L S S F + T
Sbjct: 23 ACPSRCSCSGTEIRCISKGLTSFPSGIPSRTTVL-------YLDNNKLQSIPSGVFDKLT 75
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+R L++N + LP F +L + L N + +P F L+ +
Sbjct: 76 QLTRLDLDRNQLKSLPMGIFDKLTKLSHLELYSNQLKSVPDGIFDRLTSLQSL 128
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-LSWLHRWLKRYP 51
L +N L +PDG+F L L++L + N + C CH + +L RWL+ P
Sbjct: 106 LYSNQLKSVPDGIFDRLTSLQSLYVYNNPWDCSCHGVDYLSRWLQNNP 153
>gi|253401321|gb|ACT31440.1| variable lymphocyte receptor B diversity region [Petromyzon
marinus]
Length = 168
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 80/169 (47%), Gaps = 14/169 (8%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC K L VP +P T L L N IT+L P F +L R+DL
Sbjct: 1 ACPSQCSCSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNRITKLEPGVFDRLTQLTRLDL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ++ + F L LT L+LN+N L +P G F L L + + N + C C +
Sbjct: 61 DNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLRSLTHIWLLNNPWDCACSDI 120
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L RW+ ++P L L++ +CSG++ R+
Sbjct: 121 LYLSRWISQHPWLVF-------------GYLNLDHDSARCSGTNTPVRA 156
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ VDC K L VP +P TT++ Y+ +R+ K+ F R T
Sbjct: 1 ACPSQCSCSGTTVDCSGKSLASVPTGIP-TTTQVLYLYD-NRITKL-----EPGVFDRLT 53
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+R L+ N +T LP F +L ++ L N + +P AF N + L +
Sbjct: 54 QLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLRSLTHI 106
>gi|241913328|pdb|3G3B|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
gi|241913330|pdb|3G3B|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
gi|241913332|pdb|3G3B|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
gi|241913334|pdb|3G3B|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
Length = 170
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 80/169 (47%), Gaps = 14/169 (8%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC K L VP +P T L L N IT+L P F +L R+DL
Sbjct: 2 ACPSQCSCSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNRITKLEPGVFDRLTQLTRLDL 61
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ++ + F L LT L+LN+N L +P G F L L + + N + C C +
Sbjct: 62 DNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLRSLTHIWLLNNPWDCACSDI 121
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L RW+ ++P L L++ +CSG++ R+
Sbjct: 122 LYLSRWISQHPWLVF-------------GYLNLDHDSARCSGTNTPVRA 157
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ VDC K L VP +P TT++ Y+ +R+ K+ F R T
Sbjct: 2 ACPSQCSCSGTTVDCSGKSLASVPTGIP-TTTQVLYLYD-NRITKL-----EPGVFDRLT 54
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+R L+ N +T LP F +L ++ L N + +P AF N + L +
Sbjct: 55 QLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLRSLTHI 107
>gi|260812014|ref|XP_002600716.1| hypothetical protein BRAFLDRAFT_83458 [Branchiostoma floridae]
gi|229286005|gb|EEN56728.1| hypothetical protein BRAFLDRAFT_83458 [Branchiostoma floridae]
Length = 663
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 160/408 (39%), Gaps = 41/408 (10%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
LNNN L L DG+ L L L + +N +S + + + F H
Sbjct: 114 LNNNELVSLEDGILRNLTSLVYLYLKDN------KISTIPERITK--------SSFKTMH 159
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
I +L +P G ++P C + C C G V C + L VP +P
Sbjct: 160 ILWV-LLTVPAVVTTVQG--QRPLA-CDSVGDGSPVCSCRSGRVSCEDADLTDVPTDIPP 215
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL-KSLTSLTLNNNN 183
T L L N IT LP F + +DLS N+I+ + V AF GL SL L LNNN
Sbjct: 216 DTGTLELSGNKITSLPALVFDGLPEVTTLDLSNNEIASIEVGAFDGLGGSLRKLDLNNNE 275
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
L L DG+ L L L + +N S + R L ++ + H+
Sbjct: 276 LVSLEDGILRNLTSLVYLYLKDNKI--STVSSEVFRGLSSLLQIFFDGNRISSFHV--DT 331
Query: 244 ILDIPEHEFKCSGSSMET-RSKIYREECSTDFHPYNSCPVE---KPTGECAAEPSCPHPC 299
D+P S ++E R++I R + P ++ G P
Sbjct: 332 FSDLP------SLYAVELPRNRIRRLDSILPALPSRVGSIDLSGNNLGNIGPAAFNRFPT 385
Query: 300 RCADGIVDCREKGLNKVPILLPEATTELTYMVSI--DRVDKVLLYSYISNNFKRWTNRSR 357
+ + C + ++ P+A L ++ S+ D D V L + + + +
Sbjct: 386 LSSLNLKSC------NISVVSPDAFVGLEFLGSLYFDENDLVELKNNMFGTHEYSSLAIL 439
Query: 358 RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R N I + F ++RL I+L+ N++ LPP FAN RL +
Sbjct: 440 RFNDNKIKTIEAGFFNRFRRLAYIQLKSNNLASLPPGVFANLSRLEEL 487
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 100/297 (33%), Gaps = 73/297 (24%)
Query: 101 CRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQI 160
C C G V C + L VP +P T L L N IT LP F + ++ +DLS N+I
Sbjct: 35 CSCRSGRVSCEDADLTDVPTDIPPDTGTLELTGNKITSLPELVFDDLPQVSTLDLSDNEI 94
Query: 161 SKVAVDAFQGL-KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
+ + V AF GL SL+ L LNNN L L DG+ L L L
Sbjct: 95 ASIEVGAFDGLGGSLSKLDLNNNELVSLEDGILRNLTSLVYL------------------ 136
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
++K I IPE K S +M + +
Sbjct: 137 ------------------YLKDNKISTIPERITKSSFKTMHILWVLLTVPAVV-----TT 173
Query: 280 CPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKV 339
++P C + C C G V C + L VP +P T L
Sbjct: 174 VQGQRPLA-CDSVGDGSPVCSCRSGRVSCEDADLTDVPTDIPPDTGTL------------ 220
Query: 340 LLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L N IT LP F + + L N+I + AF
Sbjct: 221 ------------------ELSGNKITSLPALVFDGLPEVTTLDLSNNEIASIEVGAF 259
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 124 EATTELRLEQNDITELPPKAFAN--YKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
E L ++ND+ EL F Y L + + N+I + F + L + L +
Sbjct: 408 EFLGSLYFDENDLVELKNNMFGTHEYSSLAILRFNDNKIKTIEAGFFNRFRRLAYIQLKS 467
Query: 182 NNLTYLPDGVFAELFRLRTLRISENSF 208
NNL LP GVFA L RL L +++N F
Sbjct: 468 NNLASLPPGVFANLSRLEELLLNDNKF 494
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 63/168 (37%), Gaps = 17/168 (10%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
LR N I + F ++RL I L N ++ + F L L L LN+N L
Sbjct: 439 LRFNDNKIKTIEAGFFNRFRRLAYIQLKSNNLASLPPGVFANLSRLEELLLNDNKFESLD 498
Query: 189 D-GVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDI 247
D +F +L +RTL + EN+ + L + LGL+ A + I+ ++
Sbjct: 499 DPNIFRDLQSIRTLELQENNLKSLPSGIFSESNLPKLKTLGLHYN--ALTEIENGTFDNL 556
Query: 248 PE-----------HEFKCS---GSSMETRSKIYREECSTDFHPYNSCP 281
P C M +++ C+ D P CP
Sbjct: 557 PNINTIYLQYNPLKNVSCGMIPSKGMSASLEMFTVSCTCDIEPLYDCP 604
>gi|348568141|ref|XP_003469857.1| PREDICTED: leucine-rich repeat-containing protein 17-like [Cavia
porcellus]
Length = 442
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 131/289 (45%), Gaps = 37/289 (12%)
Query: 6 NNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAPS 63
+N + L + VF L LR+ +N + C C + L L+ R LG Y KC +P
Sbjct: 138 QHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCEIETLVSMLQVPRNRNLGNYAKCESPQ 197
Query: 64 HIKG----------------QNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGI 107
+K + LD P+ + P+ +P + + P +
Sbjct: 198 ALKNKKLLQLKPEVLCNEDEKEPLD-PKPQVSGRPPITRPEADSTLCHNYVFPIQT---- 252
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
+DC+ K L KVP +P +L L N I +L PK F + L++++LS N I + A
Sbjct: 253 LDCKRKELKKVPTNIPPDIIKLDLSYNKIKQLRPKEFEDVHELKKLNLSSNGIEFIDPAA 312
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL 227
F GL L L L+NN+L GV +L+ L+ L + +N + CD ++ +L+ WLK +
Sbjct: 313 FLGLTHLEELDLSNNSLQNFDYGVLEDLYFLKLLWLRDNPWRCDYNIHYLYYWLKHH--- 369
Query: 228 GLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHP 276
Y F+ K +PE E+K G S+ + Y EEC D P
Sbjct: 370 --YNVHFSGLECK------MPE-EYK--GWSVGKYVRSYYEECPKDKLP 407
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 124/321 (38%), Gaps = 45/321 (14%)
Query: 87 PTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFAN 146
P A SC + +DC+E+ L V P+ + L +N I L F+
Sbjct: 45 PVKRYAPGHSCDVYTYLYEKYLDCQERKLVYVLPAWPQDLLHMLLARNKIRVLKNNMFSK 104
Query: 147 YKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
+KRL+ +DL +N+ISK+ +AF GLK LT+L L +N + L + VF L LR+ +N
Sbjct: 105 FKRLKSLDLQQNEISKIESEAFFGLKKLTTLLLQHNQIKVLTEEVFIYTPLLSYLRLYDN 164
Query: 207 SFICDCHLSWLHRWLK--RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSK 264
+ C C + L L+ R LG Y KC +P L + E C+ E
Sbjct: 165 PWHCTCEIETLVSMLQVPRNRNLGNYAKCESP-QALKNKKLLQLKPEVLCNEDEKEP--- 220
Query: 265 IYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEAT 324
P P A+ + H +DC+ K L KVP +P
Sbjct: 221 ---------LDPKPQVSGRPPITRPEADSTLCHNYVFPIQTLDCKRKELKKVPTNIPPDI 271
Query: 325 TELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLE 384
+L L N I +L PK F + L+++ L
Sbjct: 272 IKLD------------------------------LSYNKIKQLRPKEFEDVHELKKLNLS 301
Query: 385 QNDITELPPKAFANYKRLRRM 405
N I + P AF L +
Sbjct: 302 SNGIEFIDPAAFLGLTHLEEL 322
>gi|357604744|gb|EHJ64305.1| putative toll [Danaus plexippus]
Length = 1306
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 111/258 (43%), Gaps = 55/258 (21%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLR-----------------------------ISENSFI 35
LNNNN+ Y+ G F++L +L T+ IS N F+
Sbjct: 602 LNNNNIAYIQVGTFSKLKKLSTVSLNNNKIVQLDMNALRLDQINEDSDLPEFFISGNPFV 661
Query: 36 CDCHLSWLHR--WL---KRYPRLGLYTKCF-APSHIKGQN---ILDIPEHEFKCSGPVEK 86
CDC + W+ R +L ++YPR+ K F H + + I+D+ +F C P E
Sbjct: 662 CDCSMEWIQRINYLSHSRQYPRVLDLDKTFCTLVHSRAKEKKMIIDMSPSDFLC--PYES 719
Query: 87 ---------PTGECAAEPSCPHPCRCADGI------VDCREKGLNKVPILLPEATTELRL 131
C E CP+ CRC I VDC G +VP +P TE+ L
Sbjct: 720 HCFALCHCCDFFACDCEMICPNNCRCYHDITWNANVVDCSNAGYTQVPDRIPMDATEIYL 779
Query: 132 EQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGV 191
+ NDI+ L F K+L+ + L+ ++ +V F+G+ SL L L NN L L
Sbjct: 780 DGNDISNLGNHIFIGKKKLQVLYLNNTKLKEVNNQTFKGVDSLRVLHLENNKLVELKGDE 839
Query: 192 FAELFRLRTLRISENSFI 209
F L L L + N+ +
Sbjct: 840 FLHLNNLNELYLDHNAIV 857
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 133/344 (38%), Gaps = 83/344 (24%)
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
P++ L L N I + K ++ +DLS N IS++ V + S+ L LNN
Sbjct: 547 FPKSLEWLDLHMNYINNVYNKDINTKLNIKLLDLSYNNISQLIVTSLP--TSIEKLYLNN 604
Query: 182 NNLTYLPDGVFAELFRLRTLR-----------------------------ISENSFICDC 212
NN+ Y+ G F++L +L T+ IS N F+CDC
Sbjct: 605 NNIAYIQVGTFSKLKKLSTVSLNNNKIVQLDMNALRLDQINEDSDLPEFFISGNPFVCDC 664
Query: 213 HLSWLHR--WL---KRYPRLGLYTKCF-APSHIKGQN---ILDIPEHEFKCSGSSMETRS 263
+ W+ R +L ++YPR+ K F H + + I+D+ +F C
Sbjct: 665 SMEWIQRINYLSHSRQYPRVLDLDKTFCTLVHSRAKEKKMIIDMSPSDFLCP-------- 716
Query: 264 KIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI------VDCREKGLNKVP 317
Y C F + C C E CP+ CRC I VDC G +VP
Sbjct: 717 --YESHC---FALCHCCDF----FACDCEMICPNNCRCYHDITWNANVVDCSNAGYTQVP 767
Query: 318 ILLPEATTELTYMVSIDRVD---------KVLLYSYISNNFKRWTN----------RSRR 358
+P TE+ Y+ D + K L Y++N + N R
Sbjct: 768 DRIPMDATEI-YLDGNDISNLGNHIFIGKKKLQVLYLNNTKLKEVNNQTFKGVDSLRVLH 826
Query: 359 LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
LE N + EL F + L + L+ N I + F++ K L
Sbjct: 827 LENNKLVELKGDEFLHLNNLNELYLDHNAIVHVANNTFSSLKSL 870
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 89/209 (42%), Gaps = 14/209 (6%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLH--RWLKRYPRLGLYTKCFAP 62
L NN ++ L DG F L L+ L +S N FI + ++LK K P
Sbjct: 222 LQNNAISTLEDGAFEGLISLQILNLSSN-FINNIPQDIFSDTKFLKEIFLSNNTIKVLPP 280
Query: 63 SHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILL 122
+G + L I + + T + + + R I++ L ++ +
Sbjct: 281 GLFRGLDQLQIFDFSHN------ELTSQWINKETFIGLVRMV--ILNISYNKLTRIDRYM 332
Query: 123 PE---ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTL 179
+ + +L LE NDIT + +AF + L + LS N+I+ + F L L L L
Sbjct: 333 FQDLYSLQKLNLEYNDITSIEERAFEELRNLHSLTLSNNKITHIHTHIFSELHVLHELFL 392
Query: 180 NNNNLTYLPDGVFAELFRLRTLRISENSF 208
+NN + ++ + F + + L +++N+
Sbjct: 393 DNNQIKHIDENAFDNMTTIEDLSLNDNAL 421
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 70/169 (41%), Gaps = 17/169 (10%)
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCAD----GIVDCREKGLNKVPI 120
+K NI + K G + + + SC D ++ E L+K+
Sbjct: 157 LKKLNITNNHLQNIKTIGFADSSREQNLSVKSCNLALEVLDMSYNDLIVITENSLSKL-- 214
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN 180
+ T+L L+ N I+ L AF L+ ++LS N I+ + D F K L + L+
Sbjct: 215 ---RSLTKLFLQNNAISTLEDGAFEGLISLQILNLSSNFINNIPQDIFSDTKFLKEIFLS 271
Query: 181 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGL 229
NN + LP G+F L +L+ S N +W+ + +GL
Sbjct: 272 NNTIKVLPPGLFRGLDQLQIFDFSHNELTS--------QWINKETFIGL 312
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 85/211 (40%), Gaps = 32/211 (15%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+NN + LP G+F L +L+ S N +W+ + +GL +
Sbjct: 270 LSNNTIKVLPPGLFRGLDQLQIFDFSHNELTS--------QWINKETFIGLVRMVIL--N 319
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
I + I + F+ ++K E + I E+ ++ L
Sbjct: 320 ISYNKLTRIDRYMFQDLYSLQKLNLE-------------YNDITSIEERAFEELRNL--- 363
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL 184
L L N IT + F+ L + L NQI + +AF + ++ L+LN+N L
Sbjct: 364 --HSLTLSNNKITHIHTHIFSELHVLHELFLDNNQIKHIDENAFDNMTTIEDLSLNDNAL 421
Query: 185 TYLPDGVFAELFRLRTLRISENSFICDCHLS 215
+ +P + +L LR+L I N+ HLS
Sbjct: 422 SSIPLSI-RKLRSLRSLDIGNNNI---THLS 448
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLS--KNQISKVAVD----AFQGLKSLTSLTLNN 181
+L +++ I ++PP+AF N+K L+ + ++ ++ S + +D AF GL L L L++
Sbjct: 81 DLVIDKCKIRQIPPRAFENFKDLKSLHVTTHNSEWSAMTMDLHELAFMGLSELIELDLSD 140
Query: 182 NNLTYLPDGVFAELFRLRTLRISEN 206
NN+ F L+ L+ L I+ N
Sbjct: 141 NNIWSTKTDTFCSLYSLKKLNITNN 165
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 87/211 (41%), Gaps = 32/211 (15%)
Query: 8 NNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKG 67
N++T + + F EL L +L +S N ++T F+ H+
Sbjct: 347 NDITSIEERAFEELRNLHSLTLSNNKIT------------------HIHTHIFSELHVLH 388
Query: 68 QNILD------IPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPIL 121
+ LD I E+ F +E + A S P R + + G N + L
Sbjct: 389 ELFLDNNQIKHIDENAFDNMTTIEDLSLNDNALSSIPLSIRKLRSLRSL-DIGNNNITHL 447
Query: 122 LPE---ATTEL---RLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLT 175
E +EL RL N +T L F + +L+ ++L+ N+I VA F+ +L
Sbjct: 448 SRENFRGLSELFGLRLVDNKVTYLNENTFEHLPQLQVLNLASNKIKLVAAGCFRKNVNLK 507
Query: 176 SLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
L ++ N +T DG+F+ L L L +S N
Sbjct: 508 LLRMDGNEITNF-DGIFSSLNSLVWLNMSAN 537
>gi|320169763|gb|EFW46662.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 684
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 130/316 (41%), Gaps = 33/316 (10%)
Query: 101 CRCADGI-VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQ 159
C C+ G VDC + L +P +P TT+LRL N T + AF+ L + LS N
Sbjct: 9 CDCSTGTTVDCGSRSLTTIPDGIPVTTTDLRLHLNLFTSVAANAFSGLTALNSLFLSNNP 68
Query: 160 ISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR 219
I+ +AV+AF GL +LT L+L N LT +PD F L L L + ++ S
Sbjct: 69 ITSIAVNAFSGLTALTQLSLAGNPLTTIPDNTFTGLTALTRLDV----YVTQIA-SISAS 123
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
P L + + + I +I + F +G + TR ++ + S
Sbjct: 124 AFAGLPVLEVLS-------LNDNQITNIASNTF--TGLTALTRLSLFNNNIT-------S 167
Query: 280 CPVEKPTG-------ECAAEPSCPHPCRCADGIVDCREKGL--NKVPILLPEATTELTYM 330
P + A G+ + L N++ + P A T LT +
Sbjct: 168 IPASAFADLSALTYLDLAGNQMTSLSANAFIGLTELTYLSLTSNEITSISPAAFTGLTAL 227
Query: 331 VSIDRVDKVLLYSYISNNFKRWTNRS-RRLEQNDITELPPKAFANYKRLRRIRLEQNDIT 389
+ ++ L+ S +N+F T+ + R+ N IT L FA L + L+ N +T
Sbjct: 228 TEL-VLENNLIASISANDFAGLTSLNLLRMRNNQITSLSANGFAGLPSLTELDLDLNLMT 286
Query: 390 ELPPKAFANYKRLRRM 405
+ AFA L +
Sbjct: 287 SIDASAFAGLTSLNLL 302
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 98/236 (41%), Gaps = 40/236 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTL--------RISENSFICDCHLSWLHRWLKRYPRL-- 53
+L NNN+T +P FA+L L L +S N+FI L++L +
Sbjct: 159 SLFNNNITSIPASAFADLSALTYLDLAGNQMTSLSANAFIGLTELTYLSLTSNEITSISP 218
Query: 54 GLYTKCFAPSHIKGQN--ILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADG-IVDC 110
+T A + + +N I I ++F A + + R + I
Sbjct: 219 AAFTGLTALTELVLENNLIASISANDF--------------AGLTSLNLLRMRNNQITSL 264
Query: 111 REKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQG 170
G +P L TEL L+ N +T + AFA L + + NQI+ ++ + F G
Sbjct: 265 SANGFAGLPSL-----TELDLDLNLMTSIDASAFAGLTSLNLLSVQNNQITSISANGFAG 319
Query: 171 LKSLTSLTLNNNNLTYLPDGVFAELFRLRTLR--------ISENSFICDCHLSWLH 218
L SLT+L L +N +T + FA L L LR IS N+F LS L
Sbjct: 320 LPSLTALGLESNQITSISANAFAGLTSLNFLRLEGNQITSISANAFAAVTSLSVLS 375
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
LRLE N IT + AFA L + L NQI+ + +AF GL ++ L LN+N T LP
Sbjct: 350 LRLEGNQITSISANAFAAVTSLSVLSLHFNQITSFSANAFTGLTTMMYLLLNSNPFTTLP 409
Query: 189 DGVFAEL-----FRLRTLRISENSFICDCHL 214
G+F L L +S N+F + ++
Sbjct: 410 PGLFQGLQNGLILSLEDSSLSPNNFTFNGNI 440
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Query: 107 IVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVD 166
I G +P L T L LE N IT + AFA L + L NQI+ ++ +
Sbjct: 309 ITSISANGFAGLPSL-----TALGLESNQITSISANAFAGLTSLNFLRLEGNQITSISAN 363
Query: 167 AFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
AF + SL+ L+L+ N +T F L + L ++ N F
Sbjct: 364 AFAAVTSLSVLSLHFNQITSFSANAFTGLTTMMYLLLNSNPF 405
>gi|432875194|ref|XP_004072721.1| PREDICTED: G-protein coupled receptor 124-like [Oryzias latipes]
Length = 1344
Score = 92.0 bits (227), Expect = 5e-16, Method: Composition-based stats.
Identities = 55/169 (32%), Positives = 87/169 (51%), Gaps = 3/169 (1%)
Query: 91 CAAEPSCPHPCRCADGIVDCREKGLNKVPI--LLPEATTELRLEQNDITELPPKAFANYK 148
C E PH + V+C ++ L ++P L P T L L+ N I+ + P AF
Sbjct: 53 CKDEKIKPHSVQNEGKKVNCSKEELLELPAASLFPSNTVSLDLKHNLISTIMPGAFQGLS 112
Query: 149 RLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
LRR+DLS N+I + + FQGL +L L L+ N ++ L VF EL L+ + + +
Sbjct: 113 ELRRLDLSNNRIGCLTGNMFQGLTNLAKLNLSGNIISTLDSEVFEELPSLKRVNFNSDYL 172
Query: 209 ICDCHLSWLHRWLK-RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSG 256
CDC L W+ +L+ R ++G T C PS ++ + + + E + C G
Sbjct: 173 TCDCGLRWVPNFLQSRSVQIGSETLCAYPSTLRREPLNRLKESQLSCDG 221
Score = 45.4 bits (106), Expect = 0.047, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTKCFAPS 63
L+ N ++ L VF EL L+ + + + CDC L W+ +L+ R ++G T C PS
Sbjct: 143 LSGNIISTLDSEVFEELPSLKRVNFNSDYLTCDCGLRWVPNFLQSRSVQIGSETLCAYPS 202
Query: 64 HIKGQNILDIPEHEFKCSGP 83
++ + + + E + C GP
Sbjct: 203 TLRREPLNRLKESQLSCDGP 222
>gi|407907629|gb|AFU48617.1| toll-like receptor i [Mytilus galloprovincialis]
Length = 673
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 113/218 (51%), Gaps = 21/218 (9%)
Query: 14 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK----RYPRLGL-YTKCFAPSHIKGQ 68
P G F F L I+ N++ CDCH+ ++ ++ RY L + +C P ++ GQ
Sbjct: 236 PGGDFVGDFVTYRLDITNNNWTCDCHMHYMASKIQDSFYRYAESELLHVECGNPPNLSGQ 295
Query: 69 NILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEA--- 125
++++ +EF C C+ +C + VDC L K+P+ LP+
Sbjct: 296 RLMNVDLNEFNCD------VANCSFGCTCTNISETQILQVDCMNGNLYKLPMKLPDIPDR 349
Query: 126 TTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL-KSLTSLTLNNNNL 184
T L + N I ++ P+ + + +L +++++ N++ + + + + +S S+ ++NNNL
Sbjct: 350 TITLDVSNNSIWKIDPRPYVD--KLVKLNVANNKLVFIDQETVKNMTQSKLSMNISNNNL 407
Query: 185 TYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK 222
+LP+ + ++++ I N F+CDC+++W+ WL+
Sbjct: 408 KFLPNSIQ----NVQSISIYNNPFMCDCNMTWMKGWLE 441
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 22/126 (17%)
Query: 102 RCADGI---VDCREKGLNKVPILL-----PEATTELRLEQNDITELPPKAFANYK----- 148
+C+D +D +G+ ++ L P+A + + L N IT + +FA+Y
Sbjct: 20 QCSDQTLTNIDMSNRGITEIDESLFANCNPQAIS-IDLSGNQITHINATSFASYDGGLSQ 78
Query: 149 -------RLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELF-RLRT 200
+L+ ++L NQIS + DAF+ K L +L +NNN L L VF + L T
Sbjct: 79 KYIPLFYQLKTLNLDDNQISSIDHDAFKYTKVLETLKMNNNQLRSLEAEVFEPIGDTLVT 138
Query: 201 LRISEN 206
L +S N
Sbjct: 139 LELSHN 144
Score = 41.2 bits (95), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 54/140 (38%), Gaps = 35/140 (25%)
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK----RYPRLGL-YTKCFAPSHIKGQ 242
P G F F L I+ N++ CDCH+ ++ ++ RY L + +C P ++ GQ
Sbjct: 236 PGGDFVGDFVTYRLDITNNNWTCDCHMHYMASKIQDSFYRYAESELLHVECGNPPNLSGQ 295
Query: 243 NILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCA 302
++++ +EF C C+ +C +
Sbjct: 296 RLMNVDLNEFNCD------------------------------VANCSFGCTCTNISETQ 325
Query: 303 DGIVDCREKGLNKVPILLPE 322
VDC L K+P+ LP+
Sbjct: 326 ILQVDCMNGNLYKLPMKLPD 345
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
Query: 1 MPRTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK 48
+ ++NNNL +LP+ + ++++ I N F+CDC+++W+ WL+
Sbjct: 398 LSMNISNNNLKFLPNSIQ----NVQSISIYNNPFMCDCNMTWMKGWLE 441
>gi|70955660|gb|AAZ16391.1| variable lymphocyte receptor B [Eptatretus stoutii]
Length = 252
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 66/127 (51%), Gaps = 1/127 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C+ K L VP +P TT L LE N I +P F +L R+DL
Sbjct: 23 ACPSRCSCSGTTVSCQSKSLTSVPSGIPSRTTVLYLEGNKIQSIPSGVFDKLTQLTRLDL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
NQ+ + + F L LT L L +N L +PDGVF L L+ + + N + C C +
Sbjct: 83 DTNQLKSLPMGIFDKLTKLTHLELYSNQLKSVPDGVFDSLTSLQNIYLYSNPWDCTCPGV 142
Query: 215 SWLHRWL 221
+L RWL
Sbjct: 143 DYLSRWL 149
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V C+ K L VP +P TT L ++ + S S F + T
Sbjct: 23 ACPSRCSCSGTTVSCQSKSLTSVPSGIPSRTTVL-------YLEGNKIQSIPSGVFDKLT 75
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+R L+ N + LP F +L + L N + +P F + L+ +
Sbjct: 76 QLTRLDLDTNQLKSLPMGIFDKLTKLTHLELYSNQLKSVPDGVFDSLTSLQNI 128
>gi|351699790|gb|EHB02709.1| Putative G-protein coupled receptor 124, partial [Heterocephalus
glaber]
Length = 1131
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 90/212 (42%), Gaps = 35/212 (16%)
Query: 73 IPEHEFKCSGPVEKPTGECAAEPSCPHPCR--CADGIVDCREKGLNKVPILLPEATTELR 130
+P KCSG E+P G P HP R A G D E P LLP T L
Sbjct: 7 VPIRSCKCSG--ERPKGVGGGAP---HPARRRVACGGGDLLEP---PEPSLLPNGTVTLL 58
Query: 131 LEQNDITEL------------------------PPKAFANYKRLRRIDLSKNQISKVAVD 166
L N IT L P AF L+R+DLS N+I + D
Sbjct: 59 LSNNKITVLRNGSFLGLSLLEKLDLRNNVISVVQPGAFLGLGELKRLDLSNNRIGCLTSD 118
Query: 167 AFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP- 225
FQGL L L ++ N + L GVF EL L+ + CDCHL WL W + +
Sbjct: 119 TFQGLPRLLRLNISGNIFSSLHAGVFDELPALKVMDFGTEFLTCDCHLGWLLPWARNHSL 178
Query: 226 RLGLYTKCFAPSHIKGQNILDIPEHEFKCSGS 257
+L +T C PS + + + + E + +C G+
Sbjct: 179 QLSEHTLCAYPSALHARALGGLQETQLRCEGA 210
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 1 MPRTL----NNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGL 55
+PR L + N + L GVF EL L+ + CDCHL WL W + + +L
Sbjct: 123 LPRLLRLNISGNIFSSLHAGVFDELPALKVMDFGTEFLTCDCHLGWLLPWARNHSLQLSE 182
Query: 56 YTKCFAPSHIKGQNILDIPEHEFKCSGPVEKPT 88
+T C PS + + + + E + +C G +E T
Sbjct: 183 HTLCAYPSALHARALGGLQETQLRCEGALELHT 215
>gi|119928605|dbj|BAF43126.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 170
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 68/133 (51%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C E+ L VP +P T L L+ N IT+L P F + L+ + L
Sbjct: 11 ACPAQCSCSGTTVHCHERSLASVPAGIPTTTQSLSLQVNQITKLEPGVFDHLANLQHLYL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
NQ+S + V F L LT L LN N L +P+GVFA L L + + N + C C +
Sbjct: 71 GDNQLSALPVGVFDKLTQLTDLGLNGNQLKSVPNGVFARLLSLTHVWLHTNPWDCQCTDI 130
Query: 215 SWLHRWLKRYPRL 227
+L W ++ +
Sbjct: 131 LYLSGWAAQHSGI 143
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V C E+ L VP +P T L+ V+ + ++ +++N
Sbjct: 11 ACPAQCSCSGTTVHCHERSLASVPAGIPTTTQSLSLQVNQITKLEPGVFDHLAN------ 64
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L N ++ LP F +L + L N + +P FA L +
Sbjct: 65 LQHLYLGDNQLSALPVGVFDKLTQLTDLGLNGNQLKSVPNGVFARLLSLTHV 116
>gi|81175404|gb|ABB59040.1| variable lymphocyte receptor B [Eptatretus stoutii]
Length = 259
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 79/171 (46%), Gaps = 13/171 (7%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C KGL VP +P +TT+L L N + LP F L ++ L
Sbjct: 23 ACPSRCSCSGTTVNCYNKGLTSVPSGIPSSTTKLLLHDNKLQSLPNGVFDKLTSLTQLYL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
N++ + F L SLT L LN N L +PDG+F L L+ + + N + C C +
Sbjct: 83 GGNKLQSLPSGVFDKLTSLTHLGLNINQLKSVPDGIFDRLTSLQNIWLYSNPWDCSCPRI 142
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKI 265
+L RW+++ S N + KCSGS RS I
Sbjct: 143 EYLSRWIQKN------------SATVKDNSWNTAPDSAKCSGSGKPVRSII 181
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C KGL VP +P +TT+L + L S + F + T
Sbjct: 23 ACPSRCSCSGTTVNCYNKGLTSVPSGIPSSTTKLL-------LHDNKLQSLPNGVFDKLT 75
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ ++ L N + LP F L + L N + +P F L+ +
Sbjct: 76 SLTQLYLGGNKLQSLPSGVFDKLTSLTHLGLNINQLKSVPDGIFDRLTSLQNI 128
>gi|119928670|dbj|BAF43156.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 171
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 84/169 (49%), Gaps = 11/169 (6%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ + C K L VP+ +P T L L N IT+L PK F L+ + L
Sbjct: 11 ACPAQCSCSATQMLCSGKSLASVPMGIPSTTQYLDLNSNQITKLEPKVFDRLGSLQELYL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ+S + V F L LT L+LN N L +PDG FA L L + + N + C C +
Sbjct: 71 GWNQLSALPVGVFDKLTQLTHLSLNVNQLKSVPDGAFARLSSLTHVWLHTNPWDCACSDI 130
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L RW+ ++P G+ +G++ + +CSG++ R+
Sbjct: 131 LYLSRWISQHP--GVVR--------RGESGYAVDPDHARCSGTNTPVRA 169
>gi|146160859|gb|ABQ08655.1| variable lymphocyte receptor diversity region, partial [Petromyzon
marinus]
Length = 172
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 71/133 (53%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C+ K L VP +P T L L N IT+L P F + L+++ L
Sbjct: 1 ACPSQCSCSGTTVNCKSKSLASVPAGIPTTTQRLWLNNNQITKLDPGVFDSLVNLQKLYL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
+NQ+S + V F L L L+LNNN L +P G F L L + + N + C C +
Sbjct: 61 GENQLSALPVGVFDKLTQLAHLSLNNNQLKSIPRGAFDNLKSLTHIWLFGNPWDCACSDI 120
Query: 215 SWLHRWLKRYPRL 227
+L RW+ ++P +
Sbjct: 121 LYLSRWISQHPGV 133
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C+ V+C+ K L VP +P T L + I ++D + S + N ++
Sbjct: 1 ACPSQCSCSGTTVNCKSKSLASVPAGIPTTTQRLWLNNNQITKLDPGVFDSLV--NLQK- 57
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L +N ++ LP F +L + L N + +P AF N K L +
Sbjct: 58 ----LYLGENQLSALPVGVFDKLTQLAHLSLNNNQLKSIPRGAFDNLKSLTHI 106
>gi|70955607|gb|AAZ16365.1| variable lymphocyte receptor B [Eptatretus stoutii]
gi|70955609|gb|AAZ16366.1| variable lymphocyte receptor B [Eptatretus stoutii]
Length = 260
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 76/171 (44%), Gaps = 12/171 (7%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C+ + L VP P +TT L L N + LP F L + L
Sbjct: 23 ACPSRCSCSGTTVECQSRSLTSVPSAFPSSTTILYLSTNQLQSLPDGVFDKLTSLTHLYL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
NQ+ + F L LT L L NN L +PDG+F L L+ + +S+N + C C
Sbjct: 83 YTNQLQSLPSGVFDKLTQLTKLVLYNNQLKSVPDGIFDRLTSLQHIWLSDNPWDCSCPGT 142
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKI 265
+L RW++ +K +N KCSGS RS I
Sbjct: 143 DYLSRWIQT-----------NKGQVKAKNSWSSDPDSAKCSGSGKPVRSII 182
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C+ + L VP P +TT L +S ++ L S F + T
Sbjct: 23 ACPSRCSCSGTTVECQSRSLTSVPSAFPSSTTIL--YLSTNQ-----LQSLPDGVFDKLT 75
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L N + LP F +L ++ L N + +P F L+ +
Sbjct: 76 SLTHLYLYTNQLQSLPSGVFDKLTQLTKLVLYNNQLKSVPDGIFDRLTSLQHI 128
>gi|119928545|dbj|BAF43098.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 168
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 81/169 (47%), Gaps = 14/169 (8%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC + L VP +P T L L+ N IT+L P F + +L + L
Sbjct: 11 ACPARCSCSGTSVDCSARSLASVPAGIPTTTQSLSLQVNQITKLEPGVFDSLTKLTYLHL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ++ + V F L LT L LN N L +PDG FA L L + + N + C+C +
Sbjct: 71 GANQLTALPVGVFDKLTKLTHLALNVNQLKSVPDGAFARLSSLTHIYLYNNPWDCECSDI 130
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L W+ ++ + P+ G + KCSG++ R+
Sbjct: 131 LYLKNWIVQHASI------VNPAGYGGVD-------NVKCSGTNTPVRA 166
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ VDC + L VP +P T L+ + ++++ K L + ++ + T
Sbjct: 11 ACPARCSCSGTSVDCSARSLASVPAGIPTTTQSLS--LQVNQITK--LEPGVFDSLTKLT 66
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N +T LP F +L + L N + +P AFA L +
Sbjct: 67 --YLHLGANQLTALPVGVFDKLTKLTHLALNVNQLKSVPDGAFARLSSLTHI 116
>gi|395732196|ref|XP_002812383.2| PREDICTED: peroxidasin homolog [Pongo abelii]
Length = 728
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 95/233 (40%), Gaps = 30/233 (12%)
Query: 28 RISENSFICDCHLSWLHRWLKRYPRLG---LYTKCFAPSHIKGQNILDIPEHEFKCSGPV 84
R+ N+ CDC + WL LK Y G C P I+G+++ I E C
Sbjct: 19 RLDSNTLHCDCEILWLADLLKTYAESGNAQAAATCEYPRRIQGRSVATITPEELNCE--- 75
Query: 85 EKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAF 144
C D + + P ++ L +N+I + +AF
Sbjct: 76 ----------------CNSRDELFKMHSVFMFSTPQIISS-----YLYKNEIQSIDRQAF 114
Query: 145 ANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRIS 204
L ++ L NQI + D+FQ L L L L+NN +T+L G F L ++ LR+
Sbjct: 115 KGLASLEQLYLHFNQIETLDPDSFQHLPKLERLFLHNNRITHLVPGTFNHLESMKRLRLD 174
Query: 205 ENSFICDCHLSWLHRWLKRYPRLG---LYTKCFAPSHIKGQNILDIPEHEFKC 254
N+ CDC + WL LK Y G C P I+G+++ I E C
Sbjct: 175 SNTLHCDCEILWLADLLKTYAESGNAQAAATCEYPRRIQGRSVATITPEELNC 227
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLG---LYTKCFA 61
L+NN +T+L G F L ++ LR+ N+ CDC + WL LK Y G C
Sbjct: 149 LHNNRITHLVPGTFNHLESMKRLRLDSNTLHCDCEILWLADLLKTYAESGNAQAAATCEY 208
Query: 62 PSHIKGQNILDIPEHEFKCSGP 83
P I+G+++ I E C P
Sbjct: 209 PRRIQGRSVATITPEELNCERP 230
>gi|70955648|gb|AAZ16385.1| variable lymphocyte receptor B [Eptatretus stoutii]
Length = 252
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 67/127 (52%), Gaps = 1/127 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C KGL VP +P +TT L L N + LP F +L +++L
Sbjct: 23 ACPSRCSCSGTSVACDSKGLTSVPSGIPASTTYLDLNNNQLQSLPNGVFDKLTQLTKLEL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
N++ + F L LT L L +N L +PDGVF L L++L + N + C CH +
Sbjct: 83 HNNKLQSLPNGVFDKLTQLTHLDLRSNQLKSVPDGVFDSLTSLQSLYVYSNPWDCSCHGV 142
Query: 215 SWLHRWL 221
+L RWL
Sbjct: 143 DYLSRWL 149
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V C KGL VP +P +TT L ++ L S + F + T
Sbjct: 23 ACPSRCSCSGTSVACDSKGLTSVPSGIPASTTYL-------DLNNNQLQSLPNGVFDKLT 75
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ L N + LP F +L + L N + +P F + L+ +
Sbjct: 76 QLTKLELHNNKLQSLPNGVFDKLTQLTHLDLRSNQLKSVPDGVFDSLTSLQSL 128
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-LSWLHRWL 47
L +N L +PDGVF L L++L + N + C CH + +L RWL
Sbjct: 106 LRSNQLKSVPDGVFDSLTSLQSLYVYSNPWDCSCHGVDYLSRWL 149
>gi|253401328|gb|ACT31442.1| variable lymphocyte receptor B diversity region [Petromyzon
marinus]
Length = 168
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 68/133 (51%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC K L VP +P T L L N IT+L P F +L R+DL
Sbjct: 1 ACPSQCSCSGTTVDCSGKSLASVPTGIPITTQVLYLYDNQITKLEPGVFDRLTQLTRLDL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ++ + F L LT L+LN N L +P G F L L + + N + C C +
Sbjct: 61 DNNQLTVLPAGVFDKLTQLTQLSLNVNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSDI 120
Query: 215 SWLHRWLKRYPRL 227
+L RW+ ++P L
Sbjct: 121 LYLSRWISQHPGL 133
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ VDC K L VP +P TT++ Y+ +++ K+ F R T
Sbjct: 1 ACPSQCSCSGTTVDCSGKSLASVPTGIP-ITTQVLYLYD-NQITKLE-----PGVFDRLT 53
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+R L+ N +T LP F +L ++ L N + +P AF N K L +
Sbjct: 54 QLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNVNQLKSIPRGAFDNLKSLTHI 106
>gi|70955593|gb|AAZ16358.1| variable lymphocyte receptor B [Eptatretus burgeri]
Length = 257
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 80/171 (46%), Gaps = 13/171 (7%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C KGL VP + +TT L L N + LP F +L ++ L
Sbjct: 23 ACPSRCSCSGTTVSCHNKGLTAVPTGISASTTYLNLGSNKLQSLPSGVFDKLTQLTKLYL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
NQ+ + F+ L L L+L N L +PDGVF L L+ +R+ EN + C C +
Sbjct: 83 YSNQLQSLPSGVFEKLTQLKELSLRTNKLQSVPDGVFDRLTSLQYIRLYENPWDCTCPGI 142
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKI 265
+L +W+ ++ + + T + + KCSGS RS I
Sbjct: 143 RYLSQWINKHSGVLIGTSGY------------VNPDSAKCSGSGKPVRSII 181
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V C KGL VP + +TT L + L S S F + T
Sbjct: 23 ACPSRCSCSGTTVSCHNKGLTAVPTGISASTTYL-------NLGSNKLQSLPSGVFDKLT 75
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ L N + LP F +L+ + L N + +P F L+ +
Sbjct: 76 QLTKLYLYSNQLQSLPSGVFEKLTQLKELSLRTNKLQSVPDGVFDRLTSLQYI 128
>gi|284010976|dbj|BAI66963.1| variable lymphocyte receptor B [Eptatretus burgeri]
Length = 261
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 81/171 (47%), Gaps = 9/171 (5%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC KGL VP +P +TT L LE N + +P F L + L
Sbjct: 23 ACPSRCSCSGTSVDCDSKGLTSVPSGIPSSTTYLNLESNKLQSIPSGVFDKLTSLTYLHL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
N++ + F L LT+L L+ N L +PDGVF L L+ + + N + C C +
Sbjct: 83 CCNKLQSLPHGVFDKLTKLTTLVLHTNQLKSVPDGVFDRLTSLQYIYLYSNPWDCTCPGI 142
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKI 265
+L W+K+ + + S + IP+ KCSGS RS I
Sbjct: 143 RYLSEWIKKNSGIVYHYSSSTGSRV-------IPDSA-KCSGSGKPVRSII 185
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 48/113 (42%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ VDC KGL VP +P +TT L ++ L S S F + T
Sbjct: 23 ACPSRCSCSGTSVDCDSKGLTSVPSGIPSSTTYL-------NLESNKLQSIPSGVFDKLT 75
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L N + LP F +L + L N + +P F L+ +
Sbjct: 76 SLTYLHLCCNKLQSLPHGVFDKLTKLTTLVLHTNQLKSVPDGVFDRLTSLQYI 128
>gi|348530354|ref|XP_003452676.1| PREDICTED: G-protein coupled receptor 124-like [Oreochromis
niloticus]
Length = 1377
Score = 90.9 bits (224), Expect = 1e-15, Method: Composition-based stats.
Identities = 47/133 (35%), Positives = 72/133 (54%), Gaps = 1/133 (0%)
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL 184
A +L L+ N I+ + P AF LR++DLS N+I + D FQGL +LT L L+ N +
Sbjct: 117 ALDKLDLKHNLISTIKPGAFQGLSELRKLDLSNNRIGCLTADMFQGLTNLTKLNLSGNII 176
Query: 185 TYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFAPSHIKGQN 243
+ + GVF EL L+ + + + CDC L W+ + + P RLG T C P ++G+
Sbjct: 177 STMDPGVFEELPSLKLVNFNSDYLTCDCELQWVPNFFRSSPARLGEETLCAYPMSLRGKP 236
Query: 244 ILDIPEHEFKCSG 256
+ + E C G
Sbjct: 237 LRGLRESHLSCDG 249
Score = 54.3 bits (129), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFAPS 63
L+ N ++ + GVF EL L+ + + + CDC L W+ + + P RLG T C P
Sbjct: 171 LSGNIISTMDPGVFEELPSLKLVNFNSDYLTCDCELQWVPNFFRSSPARLGEETLCAYPM 230
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
++G+ + + E C GP+E
Sbjct: 231 SLRGKPLRGLRESHLSCDGPLE 252
>gi|70955626|gb|AAZ16374.1| variable lymphocyte receptor B [Eptatretus stoutii]
Length = 276
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 74/152 (48%), Gaps = 25/152 (16%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+CR K VP +P TT LRL+ N + LP F +L ++DL
Sbjct: 23 ACPSRCSCSGTTVNCRSKSFTSVPTGIPAQTTYLRLDNNKLQSLPSGVFDELTKLTKLDL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENS-------- 207
+ NQ+ + F L LT+L+++ N L LP+GVF +L +L TL + EN
Sbjct: 83 NSNQLQSLPNGVFDKLTQLTALSVSQNQLQSLPNGVFDKLTQLTTLYLYENQLKSVPDGI 142
Query: 208 ----------------FICDCH-LSWLHRWLK 222
+ C CH + +L RWL+
Sbjct: 143 FDRLTSLQSLYLESNPWDCSCHGIDYLSRWLQ 174
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 47/113 (41%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+CR K VP +P TT L R+D L S S F T
Sbjct: 23 ACPSRCSCSGTTVNCRSKSFTSVPTGIPAQTTYL-------RLDNNKLQSLPSGVFDELT 75
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ L N + LP F +L + + QN + LP F +L +
Sbjct: 76 KLTKLDLNSNQLQSLPNGVFDKLTQLTALSVSQNQLQSLPNGVFDKLTQLTTL 128
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-LSWLHRWLK 48
L N L +PDG+F L L++L + N + C CH + +L RWL+
Sbjct: 130 LYENQLKSVPDGIFDRLTSLQSLYLESNPWDCSCHGIDYLSRWLQ 174
>gi|332262831|ref|XP_003280461.1| PREDICTED: carboxypeptidase N subunit 2 [Nomascus leucogenys]
Length = 545
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 116/258 (44%), Gaps = 20/258 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTL-----RISENSFICD-CHLSWLHRWLKRYPRLGLYTK 58
L+NN L+ LP GVF++L L+ L +ISE C +W WL+R L
Sbjct: 200 LSNNALSGLPQGVFSKLGSLQELFLDSNKISELPLRCSPSSSAWRRLWLQRNAITHLPLS 259
Query: 59 CFAPSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKV 118
FA + L + + + P G A P + + E +
Sbjct: 260 IFA--SLGNVTFLSLQWNMLRV-----LPAGLFAHNPRLVGLSLTHNQLETVAEGAFAHL 312
Query: 119 PILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLT 178
L L L N IT LPP F + + L ++ L N ++ + FQ L L L+
Sbjct: 313 SNL-----RSLMLSHNAITHLPPGIFRDLEELVKLYLGSNNLTALHPALFQNLSKLELLS 367
Query: 179 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPR--LGLYTKCFAP 236
L+ N LT LP+G+F + L L + N + CDCHL++L WL++Y L + T C P
Sbjct: 368 LSKNQLTTLPEGIFDTNYNLFNLALHGNPWQCDCHLAYLFNWLQQYTDRLLNIQTYCAGP 427
Query: 237 SHIKGQNILDIPEHEFKC 254
+++KGQ + + E + C
Sbjct: 428 AYLKGQVVPALNEKQLVC 445
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 135/358 (37%), Gaps = 79/358 (22%)
Query: 93 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRR 152
A+P CP C C V C ++ L +P +P + + T L +AF + L +
Sbjct: 19 AQP-CPVGCDCFVQEVFCSDEELAAIPPDIPPYAKNIIFVETSFTTLETRAFGSNPNLTK 77
Query: 153 IDLSKNQISKVAVDAFQGL------------------------KSLTSLTLNNNNLTYLP 188
+ Q+ + DAF GL SL LTLN N L LP
Sbjct: 78 VVFLNTQLCQFRPDAFGGLPRLEDLEVTGSSFLNLSANIFSNLTSLGKLTLNFNMLEALP 137
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAP-SHIK----GQN 243
+G+F L L +L + N L+ PR + F P +H+K QN
Sbjct: 138 EGLFQHLAALESLHLQGNR-------------LQALPR-----RLFQPLTHLKTLNLAQN 179
Query: 244 IL-DIPEHEF--------------KCSGSSMETRSKIYR-EECSTDFHPYNSCPVEKPTG 287
+L +PE F SG SK+ +E D + + P+
Sbjct: 180 LLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFSKLGSLQELFLDSNKISELPL----- 234
Query: 288 ECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISN 347
C+ P A + + + +P+ + + +T++ + +VL ++
Sbjct: 235 RCS-------PSSSAWRRLWLQRNAITHLPLSIFASLGNVTFLSLQWNMLRVLPAGLFAH 287
Query: 348 NFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R S L N + + AFA+ LR + L N IT LPP F + + L ++
Sbjct: 288 N-PRLVGLS--LTHNQLETVAEGAFAHLSNLRSLMLSHNAITHLPPGIFRDLEELVKL 342
>gi|81175390|gb|ABB59034.1| variable lymphocyte receptor B [Eptatretus stoutii]
Length = 262
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 85/171 (49%), Gaps = 10/171 (5%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C KGL VP + ++T LRLE N + +P F + + + L
Sbjct: 23 ACPSRCSCSGTTVNCYNKGLTSVPTGISTSSTVLRLEYNKLPSIPSGVFDKLTQPKELHL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
NQ+ + F L SLT L+++NN L +PDG+F L L+ + + +N + C C +
Sbjct: 83 HTNQLQSLPHGVFDKLTSLTLLSVSNNQLKSVPDGIFDPLTSLQRIYLHDNPWDCGCPGI 142
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKI 265
+L W+ ++ + S+ G + P+ KCSGS RS I
Sbjct: 143 RYLSEWISKHSGI--------VSYWTGSQSVVKPDSA-KCSGSGKPVRSII 184
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 47/113 (41%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C KGL VP + ++T L R++ L S S F + T
Sbjct: 23 ACPSRCSCSGTTVNCYNKGLTSVPTGISTSSTVL-------RLEYNKLPSIPSGVFDKLT 75
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L N + LP F L + + N + +P F L+R+
Sbjct: 76 QPKELHLHTNQLQSLPHGVFDKLTSLTLLSVSNNQLKSVPDGIFDPLTSLQRI 128
>gi|70955638|gb|AAZ16380.1| variable lymphocyte receptor B [Eptatretus stoutii]
Length = 259
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 81/171 (47%), Gaps = 13/171 (7%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C KGL VP +P +TT L LE+N + LP F +L+ + L
Sbjct: 23 ACPSRCSCSGTEVNCHSKGLTSVPTGIPASTTYLDLEENQLQSLPRGVFDKLTQLKELYL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
+N++ + F L L LTL N L +PDG+F L L+ + + EN + C C +
Sbjct: 83 HENKLQSLPDGVFDKLTQLKQLTLYTNQLKSVPDGIFDRLTSLQYIWLYENPWDCTCPGI 142
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKI 265
+L W+ ++ + L T + KCSGS RS I
Sbjct: 143 RYLSEWINKHSGVVLNTYS------------SVDPDSAKCSGSGKPVRSII 181
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C KGL VP +P +TT L +++ L S F + T
Sbjct: 23 ACPSRCSCSGTEVNCHSKGLTSVPTGIPASTTYL-------DLEENQLQSLPRGVFDKLT 75
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L +N + LP F +L+++ L N + +P F L+ +
Sbjct: 76 QLKELYLHENKLQSLPDGVFDKLTQLKQLTLYTNQLKSVPDGIFDRLTSLQYI 128
>gi|405968131|gb|EKC33230.1| Slit-like protein 1 protein [Crassostrea gigas]
Length = 874
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 98/215 (45%), Gaps = 24/215 (11%)
Query: 27 LRISENSFICDCHLSWLHRWLK------RYPRLG-LYT-KCFAPSHIKGQNILDIPE--- 75
+ IS N + CDC+L WL + YP +G +Y KC A I+ +L E
Sbjct: 517 IYISGNPYNCDCNLIWLRNRVNDISMDSEYPLVGDIYNIKCVAGYKIRTPVLLSTVEPCN 576
Query: 76 ----HEFKCSGPVEKPTGE-CAAEPSCPHPCRCADG------IVDCREKGLNKVPILLPE 124
+ C E C CP C C + V C +GLNK+P P
Sbjct: 577 MLCAYNQNCQETCTCCDDEQCGCLSVCPVGCSCYNSGSDKYHYVQCSNRGLNKLPAKFPA 636
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL 184
+T+L L++N I + ++F LR I L N I + +F GL L SL LNNN++
Sbjct: 637 NSTKLLLDKNSIPSVYTRSFDGLLNLRVIHLDHNGIFTLGNRSFTGLPQLESLYLNNNHI 696
Query: 185 TYLPDGVFAELFRLRTLRISEN--SFICDCHLSWL 217
+ DGVF L LR L + N SFI DC S+L
Sbjct: 697 DQITDGVFENLQNLRELHLEFNKISFIEDCAFSYL 731
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 116/277 (41%), Gaps = 43/277 (15%)
Query: 148 KRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP--DGVF-AELFRLRTLRIS 204
K + ID+S N+I +V+ A + ++L L+L NN LT + D V + + + IS
Sbjct: 461 KNIESIDISDNKIDEVSQFAIKNYQTLRKLSLQNNKLTTIKMNDLVVPLQQSKKTMIYIS 520
Query: 205 ENSFICDCHLSWLHRWLK------RYPRLG-LYT-KCFAPSHIKGQNILDIPEH-EFKCS 255
N + CDC+L WL + YP +G +Y KC A I+ +L E C+
Sbjct: 521 GNPYNCDCNLIWLRNRVNDISMDSEYPLVGDIYNIKCVAGYKIRTPVLLSTVEPCNMLCA 580
Query: 256 GSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADG------IVDCR 309
Y + C C E +C CP C C + V C
Sbjct: 581 ----------YNQNCQ---ETCTCCDDE----QCGCLSVCPVGCSCYNSGSDKYHYVQCS 623
Query: 310 EKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELP 368
+GLNK+P P +T+L +DK + S + +F N R L+ N I L
Sbjct: 624 NRGLNKLPAKFPANSTKLL-------LDKNSIPSVYTRSFDGLLNLRVIHLDHNGIFTLG 676
Query: 369 PKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++F +L + L N I ++ F N + LR +
Sbjct: 677 NRSFTGLPQLESLYLNNNHIDQITDGVFENLQNLREL 713
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 118/308 (38%), Gaps = 50/308 (16%)
Query: 116 NKVPILLPEATT--ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKS 173
N V LP T +L+L+ N IT+L +N + L+ +DL N ++++ D F L
Sbjct: 215 NAVWFSLPNLHTLKDLQLQGNVITKLNKTILSNLRYLQNLDLGNNGLTELPSDIFHNLNE 274
Query: 174 LTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKC 233
L L LN N L + +G F L L +S N +K + Y
Sbjct: 275 LRFLHLNQNKLQEIKNGTFMGLVNALNLDLSGNE-------------IKEIEKTVFYD-- 319
Query: 234 FAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEP 293
S +K LDI E+ + +R+ + CS +S G
Sbjct: 320 -LESVLK----LDISENNLTRIPNLRMSRTVQWLNLCSNHIQKLSS-------GSFEGLK 367
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTY----MVSIDRVDKVLLYS------ 343
H + ++D + + +P L T +L++ + ID D + L S
Sbjct: 368 HLEHLNISKNRLIDIKNGSFSHIPRL---KTLDLSFNNIQYIQIDAFDGLQLLSELILHN 424
Query: 344 ----YISNNFKRWTN-RSRRLEQNDIT-ELPPKAFANYKRLRRIRLEQNDITELPPKAFA 397
IS F N S L N ++ +L F K + I + N I E+ A
Sbjct: 425 NVLETISVEFLPLKNLLSIDLSYNKLSMKLKSGIFP--KNIESIDISDNKIDEVSQFAIK 482
Query: 398 NYKRLRRM 405
NY+ LR++
Sbjct: 483 NYQTLRKL 490
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 80/203 (39%), Gaps = 34/203 (16%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L NN LT LP +F L LR L +++N + +K +GL
Sbjct: 256 LGNNGLTELPSDIFHNLNELRFLHLNQNKL----------QEIKNGTFMGLVNALNLD-- 303
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+ G I +I + F V K +D E L ++P L
Sbjct: 304 LSGNEIKEIEKTVFYDLESVLK---------------------LDISENNLTRIPNLRMS 342
Query: 125 ATTE-LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
T + L L N I +L +F K L +++SKN++ + +F + L +L L+ NN
Sbjct: 343 RTVQWLNLCSNHIQKLSSGSFEGLKHLEHLNISKNRLIDIKNGSFSHIPRLKTLDLSFNN 402
Query: 184 LTYLPDGVFAELFRLRTLRISEN 206
+ Y+ F L L L + N
Sbjct: 403 IQYIQIDAFDGLQLLSELILHNN 425
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 76/183 (41%), Gaps = 17/183 (9%)
Query: 34 FICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGPVEKPTGECAA 93
+I +C +S++H LGL K IK L I + F + T +
Sbjct: 12 YIENCQISFMHGSF----LLGL--KSLEQLEIKSAGKLKIQDSVFYHVPKLAHITITSSH 65
Query: 94 EPSCPHPCRCAD---------GIVDCREKGLN-KVPILLPEATTELRLEQNDITELPPKA 143
P CR + + GLN K +LP +T L L++N I+ + +
Sbjct: 66 ITKLPDLCRSGNLKYINFTKNELPSMDSIGLNCKNKTILPNLST-LILDKNSISNISSRD 124
Query: 144 FANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRI 203
F + LR + ++ + + DAF + +T L + NN++T + +F+ L+ L +
Sbjct: 125 FISVPYLRDLRIADGNLVSIEDDAFSSIPEITYLDITNNSITEVSSSLFSRTLELQVLGL 184
Query: 204 SEN 206
N
Sbjct: 185 GRN 187
>gi|284010828|dbj|BAI66889.1| variable lymphocyte receptor B [Eptatretus burgeri]
Length = 248
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 63/113 (55%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C KGL VP +P +TT+L LE N + LP F +L+ + L
Sbjct: 23 ACPSRCSCSGTTVNCNSKGLTSVPSGIPSSTTKLWLESNKLQSLPSGVFDKLTQLKDLRL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+NQ+ + F L LT L+L+ N L LPDGVF +L +LR L +S N
Sbjct: 83 YQNQLQSLPSGVFDKLTQLTKLSLSENQLQSLPDGVFEKLTQLRELWLSTNQL 135
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C KGL VP +P +TT+L ++ L S S F + T
Sbjct: 23 ACPSRCSCSGTTVNCNSKGLTSVPSGIPSSTTKL-------WLESNKLQSLPSGVFDKLT 75
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ RL QN + LP F +L ++ L +N + LP F +LR +
Sbjct: 76 QLKDLRLYQNQLQSLPSGVFDKLTQLTKLSLSENQLQSLPDGVFEKLTQLREL 128
>gi|81175410|gb|ABB59043.1| variable lymphocyte receptor B [Eptatretus stoutii]
Length = 259
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 82/171 (47%), Gaps = 13/171 (7%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C+ +GL VP + +TT L L+ N + LP F +L R+DL
Sbjct: 23 ACPSRCSCSGTEVYCQSEGLTSVPTGISASTTYLGLDNNKLQSLPSGVFDKLTQLTRLDL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
NQ+ + F LT L L+ N L +PDGVF L L+ +R+ N + C C +
Sbjct: 83 YTNQLQSLPHGVFDKQTQLTILYLSTNQLKSVPDGVFDSLTSLQHIRLYNNPWDCSCPSI 142
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKI 265
+L RW+++ + +K N P+ KCSGS RS I
Sbjct: 143 DYLSRWIQKNSAI-----------MKYGNYNTDPDSA-KCSGSGKPVRSII 181
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V C+ +GL VP + +TT L +D L S S F + T
Sbjct: 23 ACPSRCSCSGTEVYCQSEGLTSVPTGISASTTYL-------GLDNNKLQSLPSGVFDKLT 75
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+R L N + LP F +L + L N + +P F + L+ +
Sbjct: 76 QLTRLDLYTNQLQSLPHGVFDKQTQLTILYLSTNQLKSVPDGVFDSLTSLQHI 128
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HLSWLHRWLKR 49
L+ N L +PDGVF L L+ +R+ N + C C + +L RW+++
Sbjct: 106 LSTNQLKSVPDGVFDSLTSLQHIRLYNNPWDCSCPSIDYLSRWIQK 151
>gi|119928563|dbj|BAF43107.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 172
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C+ + VP +P T ELRL N IT+L P F + +L ++L
Sbjct: 11 ACPAQCSCSGASVECQSRSFASVPAGIPTTTRELRLYTNQITKLEPGVFDSLTQLTALNL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ++ + F L SL +L L NN L +P G F L L + + +N + C C +
Sbjct: 71 GGNQLTALPAGVFDSLVSLRTLDLQNNQLKSIPRGAFDNLKSLTHIWLFDNPWDCACSDI 130
Query: 215 SWLHRWLKRYPRL 227
+L RW+ ++P +
Sbjct: 131 LYLSRWISQHPGV 143
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTEL-TYMVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ V+C+ + VP +P T EL Y I +++ + S
Sbjct: 11 ACPAQCSCSGASVECQSRSFASVPAGIPTTTRELRLYTNQITKLEPGVFDSLTQLT---- 66
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L N +T LP F + LR + L+ N + +P AF N K L +
Sbjct: 67 ---ALNLGGNQLTALPAGVFDSLVSLRTLDLQNNQLKSIPRGAFDNLKSLTHI 116
>gi|119928579|dbj|BAF43114.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 169
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 72/136 (52%), Gaps = 1/136 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C+ + VP +P T ELRL N IT+L P F + +L ++L
Sbjct: 11 ACPAQCSCSGASVECQSRSFASVPAGIPTTTRELRLYTNQITKLEPGVFDSLTQLTYLNL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ++ + F L LT L L NN L +P G F L L + + +N + C C +
Sbjct: 71 HTNQLTALPEGVFDKLTQLTHLVLYNNQLKSVPRGAFDNLKSLTHIWLFDNPWDCACSDI 130
Query: 215 SWLHRWLKRYPRLGLY 230
+L RW+ ++P + +Y
Sbjct: 131 LYLSRWISQHPGVVIY 146
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 47/113 (41%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTEL-TYMVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ V+C+ + VP +P T EL Y I +++ + S +
Sbjct: 11 ACPAQCSCSGASVECQSRSFASVPAGIPTTTRELRLYTNQITKLEPGVFDSLTQLTY--- 67
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N +T LP F +L + L N + +P AF N K L +
Sbjct: 68 ----LNLHTNQLTALPEGVFDKLTQLTHLVLYNNQLKSVPRGAFDNLKSLTHI 116
>gi|449505689|ref|XP_002191039.2| PREDICTED: probable G-protein coupled receptor 125-like
[Taeniopygia guttata]
Length = 1281
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L+ N I+ + P AF L+R+DLS N+I + + F GL +L L L+ N + L
Sbjct: 76 LDLKNNLISTIEPGAFYGLSELKRLDLSNNRIGCLTPEMFVGLNNLHKLNLSGNIFSSLM 135
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFAPSHIKGQNILDI 247
+G+F+EL L+ L + +S ICDC+L W+ +W + R+ T C PS + G ++ ++
Sbjct: 136 NGLFSELLALKALHFNTDSLICDCNLKWVLQWARNASVRIAEETVCAYPSALHGLSLYNL 195
Query: 248 PEHEFKCSG 256
E++ C+G
Sbjct: 196 KENQLICAG 204
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFAPS 63
L+ N + L +G+F+EL L+ L + +S ICDC+L W+ +W + R+ T C PS
Sbjct: 126 LSGNIFSSLMNGLFSELLALKALHFNTDSLICDCNLKWVLQWARNASVRIAEETVCAYPS 185
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGE 90
+ G ++ ++ E++ C+GP+E P E
Sbjct: 186 ALHGLSLYNLKENQLICAGPLELPLFE 212
>gi|363735273|ref|XP_421695.3| PREDICTED: probable G-protein coupled receptor 125 [Gallus gallus]
Length = 1243
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 74/127 (58%), Gaps = 1/127 (0%)
Query: 131 LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDG 190
L+ N I+ + P AF L+R+DLS N+I + + F GL SL L L+ N + L +G
Sbjct: 40 LKNNLISTIEPGAFHGLSELKRLDLSNNRIGCLTPEMFVGLNSLHKLNLSGNIFSSLMNG 99
Query: 191 VFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFAPSHIKGQNILDIPE 249
+F+EL L+ L + +S ICDC+L W+ +W + R+ T C PS ++G + ++ E
Sbjct: 100 LFSELLALKALHFNTDSLICDCNLKWVLQWARNASVRIAEETVCAYPSALQGLSFRNLKE 159
Query: 250 HEFKCSG 256
++ C+G
Sbjct: 160 NQLICAG 166
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFAPS 63
L+ N + L +G+F+EL L+ L + +S ICDC+L W+ +W + R+ T C PS
Sbjct: 88 LSGNIFSSLMNGLFSELLALKALHFNTDSLICDCNLKWVLQWARNASVRIAEETVCAYPS 147
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGE 90
++G + ++ E++ C+GP+E P E
Sbjct: 148 ALQGLSFRNLKENQLICAGPLELPLFE 174
>gi|326933587|ref|XP_003212883.1| PREDICTED: receptor-type tyrosine-protein phosphatase V-like
[Meleagris gallopavo]
Length = 2967
Score = 89.4 bits (220), Expect = 3e-15, Method: Composition-based stats.
Identities = 53/122 (43%), Positives = 67/122 (54%), Gaps = 4/122 (3%)
Query: 89 GECAAEPSCPHPCRC-ADGIV---DCREKGLNKVPILLPEATTELRLEQNDITELPPKAF 144
E A PSCP C C DGIV DC E GL +VP L T L L N+I++L P AF
Sbjct: 1938 AEPGAAPSCPAQCHCEQDGIVLSVDCSELGLPEVPSALSPLTAYLDLSMNNISQLQPSAF 1997
Query: 145 ANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRIS 204
+ L + LS NQIS + +AF GL SL L L NN L+ +P +L L++LR+
Sbjct: 1998 HRLQFLEELRLSGNQISSIPGEAFSGLYSLKILMLQNNQLSRIPAEALRDLPNLQSLRLD 2057
Query: 205 EN 206
N
Sbjct: 2058 AN 2059
Score = 54.7 bits (130), Expect = 7e-05, Method: Composition-based stats.
Identities = 76/294 (25%), Positives = 117/294 (39%), Gaps = 40/294 (13%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
++ L L+ N +TE+P +A L+ + L+ NQI + AFQ L SL L L+NN
Sbjct: 2073 QSLRHLWLDDNALTEIPVRALNRLPALQAMTLALNQIWHIPDFAFQNLSSLVVLHLHNNR 2132
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+ L F L L TL ++ N + R L R LG + N
Sbjct: 2133 IQRLGANGFDGLHNLETLDLNYNELL---EFPGAIRTLGRLQELGFHN----------NN 2179
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
I IPE+ F ++T H Y++ P++ G+ A + +
Sbjct: 2180 IKAIPENAF-VGNPLLQT------------IHFYDN-PIQF-VGQSAFQYLPKLHTLSLN 2224
Query: 304 GIVDCRE----KGLNKVPIL-LPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT--NRS 356
G D RE KG + +L L A L ++ + + N + +R
Sbjct: 2225 GATDIREFPDLKGTTSLEVLTLTHAGIHLLPRAVCQQLPSLRVLELSHNKIEDLPSFHRC 2284
Query: 357 RRLEQ-----NDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+RLE+ N I E+ F LR I L NDI + P AF + L ++
Sbjct: 2285 QRLEELGLQHNRIHEIRADTFVQLTALRSIDLSCNDIHFIHPDAFVTLRSLTKL 2338
Score = 52.0 bits (123), Expect = 5e-04, Method: Composition-based stats.
Identities = 39/129 (30%), Positives = 51/129 (39%), Gaps = 34/129 (26%)
Query: 279 SCPVEKPTGECAAEPSCPHPCRC-ADGIV---DCREKGLNKVPILLPEATTELTYMVSID 334
+C E A PSCP C C DGIV DC E GL +VP L T L
Sbjct: 1930 ACCAHIRAAEPGAAPSCPAQCHCEQDGIVLSVDCSELGLPEVPSALSPLTAYLD------ 1983
Query: 335 RVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPK 394
L N+I++L P AF + L +RL N I+ +P +
Sbjct: 1984 ------------------------LSMNNISQLQPSAFHRLQFLEELRLSGNQISSIPGE 2019
Query: 395 AFANYKRLR 403
AF+ L+
Sbjct: 2020 AFSGLYSLK 2028
Score = 51.6 bits (122), Expect = 7e-04, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 38/72 (52%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL L+ N I E+ F LR IDLS N I + DAF L+SLT L L++N L L
Sbjct: 2289 ELGLQHNRIHEIRADTFVQLTALRSIDLSCNDIHFIHPDAFVTLRSLTKLDLSDNRLAVL 2348
Query: 188 PDGVFAELFRLR 199
P G L L+
Sbjct: 2349 PLGGLGSLTHLK 2360
Score = 44.3 bits (103), Expect = 0.096, Method: Composition-based stats.
Identities = 60/232 (25%), Positives = 91/232 (39%), Gaps = 46/232 (19%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+NN + L F L L TL ++ N + R L R LG +
Sbjct: 2128 LHNNRIQRLGANGFDGLHNLETLDLNYNELL---EFPGAIRTLGRLQELGFHN------- 2177
Query: 65 IKGQNILDIPEHEFKCSGPV-------EKP---TGECAAEPSCPHPCRCADGIVDCRE-- 112
NI IPE+ F P+ + P G+ A + +G D RE
Sbjct: 2178 ---NNIKAIPENAF-VGNPLLQTIHFYDNPIQFVGQSAFQYLPKLHTLSLNGATDIREFP 2233
Query: 113 --KGLNKVPIL---------LPEATTE-------LRLEQNDITELPPKAFANYKRLRRID 154
KG + +L LP A + L L N I +LP +F +RL +
Sbjct: 2234 DLKGTTSLEVLTLTHAGIHLLPRAVCQQLPSLRVLELSHNKIEDLP--SFHRCQRLEELG 2291
Query: 155 LSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
L N+I ++ D F L +L S+ L+ N++ ++ F L L L +S+N
Sbjct: 2292 LQHNRIHEIRADTFVQLTALRSIDLSCNDIHFIHPDAFVTLRSLTKLDLSDN 2343
>gi|390460295|ref|XP_002806683.2| PREDICTED: LOW QUALITY PROTEIN: relaxin receptor 1 [Callithrix
jacchus]
Length = 757
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 75/133 (56%), Gaps = 8/133 (6%)
Query: 78 FKCSGP----VEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQ 133
FK + P EKP EC S P CRC +DC E L VP + T + L+
Sbjct: 80 FKMTSPHPFEAEKP--ECLVG-SVPLQCRCQGLELDCDETNLRAVPSVSSNVTV-MSLQW 135
Query: 134 NDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFA 193
N I +LPP F NY LR++ L N+I+ ++V AF+GL SLT L L++N +T+L GVF
Sbjct: 136 NLIRKLPPDCFKNYHDLRKLYLQNNKITSISVYAFRGLNSLTKLYLSHNRITFLKPGVFE 195
Query: 194 ELFRLRTLRISEN 206
+L RL L I +N
Sbjct: 196 DLHRLEWLIIEDN 208
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 52/131 (39%), Gaps = 37/131 (28%)
Query: 275 HPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSID 334
HP+ + EKP EC S P CRC +DC E L V P ++ +T M
Sbjct: 86 HPFEA---EKP--ECLVG-SVPLQCRCQGLELDCDETNLRAV----PSVSSNVTVM---- 131
Query: 335 RVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPK 394
L+ N I +LPP F NY LR++ L+ N IT +
Sbjct: 132 -----------------------SLQWNLIRKLPPDCFKNYHDLRKLYLQNNKITSISVY 168
Query: 395 AFANYKRLRRM 405
AF L ++
Sbjct: 169 AFRGLNSLTKL 179
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 78/200 (39%), Gaps = 31/200 (15%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N +T+L GVF +L RL L I +N HLS + +P
Sbjct: 181 LSHNRITFLKPGVFEDLHRLEWLIIEDN------HLSQI-----------------SPPT 217
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCRE-KGLNKVPILLP 123
G N L + + +P C H R + L + +
Sbjct: 218 FYGLNSLILLV-------LMNNVLTHLPDKPLCQHMPRLHWLDFEGNHIHNLRNLTFISC 270
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
T L + +N I L FA ++L +DL N+I + F+ LK L+ L L+ N
Sbjct: 271 SNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPHVFKDLKELSQLNLSYNP 330
Query: 184 LTYLPDGVFAELFRLRTLRI 203
+ + F L +L++L +
Sbjct: 331 IQKIQANQFDYLVKLKSLSL 350
>gi|158431043|pdb|2V70|A Chain A, Third Lrr Domain Of Human Slit2
gi|158431044|pdb|2V70|B Chain B, Third Lrr Domain Of Human Slit2
gi|158431045|pdb|2V70|C Chain C, Third Lrr Domain Of Human Slit2
gi|158431046|pdb|2V70|D Chain D, Third Lrr Domain Of Human Slit2
Length = 220
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 90/208 (43%), Gaps = 49/208 (23%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKA-FANYKRLRRID 154
+CP CRC VDC + LNK+P +P+ T ELRL N+ T L F +LR+I+
Sbjct: 4 ACPEKCRCEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKIN 63
Query: 155 LSKNQISKVAVDAFQG------------------------LKSLTS-------------- 176
S N+I+ + AF+G L+SL +
Sbjct: 64 FSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGND 123
Query: 177 ----------LTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPR 226
L+L +N +T + G F L L TL + N F C+C+L+WL WL++
Sbjct: 124 SFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRI 183
Query: 227 LGLYTKCFAPSHIKGQNILDIPEHEFKC 254
+ +C P +K I D+ +F C
Sbjct: 184 VTGNPRCQKPYFLKEIPIQDVAIQDFTC 211
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L +N +T + G F L L TL + N F C+C+L+WL WL++ + +C P
Sbjct: 135 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPY 194
Query: 64 HIKGQNILDIPEHEFKC 80
+K I D+ +F C
Sbjct: 195 FLKEIPIQDVAIQDFTC 211
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 7/113 (6%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP CRC VDC + LNK+P +P+ T EL ++ + +L + + FK+
Sbjct: 4 ACPEKCRCEGTTVDCSNQKLNKIPEHIPQYTAEL----RLNNNEFTVLEA--TGIFKKLP 57
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R N IT++ AF + I L N + + K F + L+ +
Sbjct: 58 QLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTL 110
>gi|109080285|ref|XP_001119058.1| PREDICTED: slit homolog 3 protein-like, partial [Macaca mulatta]
Length = 90
Score = 89.4 bits (220), Expect = 3e-15, Method: Composition-based stats.
Identities = 45/79 (56%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
Query: 130 RLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPD 189
RLEQN I +P AF YK+L+RID+SKNQIS +A DAFQGLKSLTSL L N +T +
Sbjct: 1 RLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIAK 60
Query: 190 GVFAELFRLRTLRISENSF 208
G+F L L+ L+ EN F
Sbjct: 61 GLFDGLVSLQLLK--ENDF 77
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 358 RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RLEQN I +P AF YK+L+RI + +N I+++ P AF K L +
Sbjct: 1 RLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL 48
>gi|320168280|gb|EFW45179.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 769
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 119/314 (37%), Gaps = 54/314 (17%)
Query: 101 CRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQI 160
C C+ VDC KGL+ VP +P T L L N IT +P AFA L + L NQI
Sbjct: 33 CTCSGTDVDCNAKGLSAVPSGIPATTVTLFLSSNPITSIPANAFATLTALESLRLYNNQI 92
Query: 161 SKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTL--------RISENSFICDC 212
+ ++ +AF GL +LT L L N +T +P+ F L L+ L IS N+F
Sbjct: 93 TGLSANAFAGLSALTLLDLKGNQITTIPENAFTGLASLQQLWLYTNQITSISANAFAGLS 152
Query: 213 HLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECST 272
L+ L W+ P + FA + N + + ++ S
Sbjct: 153 ALTQL--WMYSNPLPNITANAFA--GLTALNSMQLDRNQLT-----------------SI 191
Query: 273 DFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS 332
+ + P + D + N + + P A LT +
Sbjct: 192 VANAFAGMP----------------------ALTDLELQN-NAITSISPSAFAGLTALTY 228
Query: 333 IDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITEL 391
++ V + +N+F + + L QN IT + AF L + L N IT +
Sbjct: 229 LNMVQNH-ITGISANSFTGLSALNELYLSQNSITVISSNAFNGLTALSSLYLPSNQITSI 287
Query: 392 PPKAFANYKRLRRM 405
F N L +
Sbjct: 288 SANVFTNLPALSSL 301
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 108 VDCREKGLNKVPI---LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVA 164
+D RE + +P+ A T L L N IT + FA+ L +DLS NQI+ +
Sbjct: 469 LDLREASITVMPVNAFTALTALTSLYLSLNQITTISANVFASLTALNYLDLSANQITSIE 528
Query: 165 VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
AF L +L+ L LN+N T LP G+F L
Sbjct: 529 ASAFTRLTALSDLYLNDNPFTTLPPGLFQGL 559
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 90/425 (21%), Positives = 156/425 (36%), Gaps = 42/425 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTL--------RISENSFICDCHLSWLHRWLKRYPRLGLY 56
L N +T +P+ F L L+ L IS N+F L+ L W+ P +
Sbjct: 111 LKGNQITTIPENAFTGLASLQQLWLYTNQITSISANAFAGLSALTQL--WMYSNPLPNIT 168
Query: 57 TKCFAPSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLN 116
FA + N + + ++ A P+ + I
Sbjct: 169 ANAFA--GLTALNSMQLDRNQLT-----SIVANAFAGMPALTDLELQNNAITSISPSAFA 221
Query: 117 KVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
+ L T L + QN IT + +F L + LS+N I+ ++ +AF GL +L+S
Sbjct: 222 GLTAL-----TYLNMVQNHITGISANSFTGLSALNELYLSQNSITVISSNAFNGLTALSS 276
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLH----RWLKRYPRLGLYTK 232
L L +N +T + VF L L +LR+ NS ++ + L+
Sbjct: 277 LYLPSNQITSISANVFTNLPALSSLRLQSNSITSISSNAFTNLPALSSLRLKSNSITSIS 336
Query: 233 CFAPSHIKGQNILDIPEHEFKC------SGSSMETRSKIYREECSTDF-HPYNSCPV--- 282
A +++ + LD+ ++E + T K+Y + +T F + ++ V
Sbjct: 337 SNAFTNLPALSALDLSDNEITVIPVNAFTNLPGLTDLKLYANKITTIFANAFSGLSVLDS 396
Query: 283 -EKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLL 341
+ P+ A + E + +P + T LT + + + L
Sbjct: 397 LDLSGNLITVIPANAIASLTALNFLYLNENQITNIPANAFASLTALTGLF----LQQNQL 452
Query: 342 YSYISNNFKRWTNR-SRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYK 400
S +N F T L + IT +P AF L + L N IT + FA+
Sbjct: 453 ASIDANAFAGLTALIDLDLREASITVMPVNAFTALTALTSLYLSLNQITTISANVFASLT 512
Query: 401 RLRRM 405
L +
Sbjct: 513 ALNYL 517
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 45/82 (54%)
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL 184
A T L L+QN + + AFA L +DL + I+ + V+AF L +LTSL L+ N +
Sbjct: 441 ALTGLFLQQNQLASIDANAFAGLTALIDLDLREASITVMPVNAFTALTALTSLYLSLNQI 500
Query: 185 TYLPDGVFAELFRLRTLRISEN 206
T + VFA L L L +S N
Sbjct: 501 TTISANVFASLTALNYLDLSAN 522
>gi|62208245|gb|AAX77066.1| variable lymphocyte receptor [Lampetra appendix]
Length = 271
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 13/169 (7%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C KGL VP +P T L L N IT+L P F + +L ++L
Sbjct: 21 ACPSQCSCSGTEVNCWNKGLASVPAGIPTTTQILFLSSNQITKLEPGVFDSLTQLTSLNL 80
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ++ + + F L LT L+L N L +P G F L L + + N + C C +
Sbjct: 81 GGNQLTALPIGVFDKLTKLTHLSLGYNQLKSIPRGAFDNLKSLTHIWLYSNPWDCACSDI 140
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L RW+ ++P + NI ++ +CSG++ R+
Sbjct: 141 LYLSRWISQHP------------GVVRNNIDNVDPDSARCSGTNTPVRA 177
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C KGL VP +P TT++ ++ S +++ K L + ++ + T
Sbjct: 21 ACPSQCSCSGTEVNCWNKGLASVPAGIP-TTTQILFLSS-NQITK--LEPGVFDSLTQLT 76
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
S L N +T LP F +L + L N + +P AF N K L +
Sbjct: 77 --SLNLGGNQLTALPIGVFDKLTKLTHLSLGYNQLKSIPRGAFDNLKSLTHI 126
>gi|148705697|gb|EDL37644.1| mCG123902, isoform CRA_b [Mus musculus]
Length = 1231
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 73/152 (48%), Gaps = 2/152 (1%)
Query: 105 DGIVDCREKGLNKV--PILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISK 162
+G V C L +V P LP T L L N I+EL +F+ L R+DL N IS+
Sbjct: 49 EGKVVCSSLELAQVLPPDTLPNRTVTLILSNNKISELKNGSFSGLSLLERLDLRNNLISR 108
Query: 163 VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK 222
+A AF GL SL L L NN + L VF L L L +CDC++ W+HRW+K
Sbjct: 109 IAPGAFWGLSSLKRLDLTNNRIGCLNADVFRGLTNLVRLEFQTEYLLCDCNILWMHRWVK 168
Query: 223 RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
T+C P ++ Q + + + C
Sbjct: 169 ERNITVRDTRCVYPKSLQAQPVTGVKQELLTC 200
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 39/84 (46%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L NN + L VF L L L +CDC++ W+HRW+K T+C P
Sbjct: 125 LTNNRIGCLNADVFRGLTNLVRLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCVYPKS 184
Query: 65 IKGQNILDIPEHEFKCSGPVEKPT 88
++ Q + + + C P+E P+
Sbjct: 185 LQAQPVTGVKQELLTCDPPLELPS 208
>gi|284010856|dbj|BAI66903.1| variable lymphocyte receptor B [Eptatretus burgeri]
Length = 201
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 68/127 (53%), Gaps = 1/127 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C +G VP +P +TT+L L N + LP F L+ + L
Sbjct: 23 ACPSRCSCSGTEVECYSQGRTSVPTGIPSSTTQLYLGANKLQSLPRGVFDKLTELKELRL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
+NQ+ + + F L SLT L LN N L +PDGVF L L+++ + N + C C +
Sbjct: 83 YENQLKSLPMGIFDKLTSLTKLGLNINQLKSVPDGVFDRLTSLQSIYLYSNPWDCTCPGV 142
Query: 215 SWLHRWL 221
+L RWL
Sbjct: 143 DYLSRWL 149
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C +G VP +P +TT+L Y+ + L S F + T
Sbjct: 23 ACPSRCSCSGTEVECYSQGRTSVPTGIPSSTTQL-YLGANK------LQSLPRGVFDKLT 75
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ RL +N + LP F L ++ L N + +P F L+ +
Sbjct: 76 ELKELRLYENQLKSLPMGIFDKLTSLTKLGLNINQLKSVPDGVFDRLTSLQSI 128
>gi|449277140|gb|EMC85416.1| putative G-protein coupled receptor 125, partial [Columba livia]
Length = 1205
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 73/127 (57%), Gaps = 1/127 (0%)
Query: 131 LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDG 190
L+ N I+ + P AF L+R+DLS N+I + + F GL SL L L+ N + L +G
Sbjct: 2 LKNNLISTIEPGAFHGLSELKRLDLSNNRIGCLTPEMFVGLNSLHKLNLSGNIFSSLMNG 61
Query: 191 VFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFAPSHIKGQNILDIPE 249
+F+EL L+ L + +S ICDC+L W+ +W + R+ T C PS ++G + ++ E
Sbjct: 62 LFSELLALKALHFNTDSLICDCNLKWVLQWARNTSVRIAEETVCAYPSALQGLSFRNLKE 121
Query: 250 HEFKCSG 256
+ C+G
Sbjct: 122 SQLICAG 128
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFAPS 63
L+ N + L +G+F+EL L+ L + +S ICDC+L W+ +W + R+ T C PS
Sbjct: 50 LSGNIFSSLMNGLFSELLALKALHFNTDSLICDCNLKWVLQWARNTSVRIAEETVCAYPS 109
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGE 90
++G + ++ E + C+GP+E P E
Sbjct: 110 ALQGLSFRNLKESQLICAGPLELPLFE 136
>gi|70955595|gb|AAZ16359.1| variable lymphocyte receptor B [Eptatretus burgeri]
Length = 261
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 84/171 (49%), Gaps = 9/171 (5%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C KGL VP +P ++T L L N + LP F +L+ + L
Sbjct: 23 ACPSRCSCSGTKVYCNSKGLTAVPTGIPASSTWLSLYDNKLQSLPHGVFDKQTQLKELHL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
++NQ+ + F L LT+L L+ N L +PDG+F L L+ + + N + C+C +
Sbjct: 83 NQNQLQSLPNGVFDKLTKLTALGLHTNQLKSVPDGIFDRLTSLQRIYLFNNPWDCECPGI 142
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKI 265
+L W+++ + + S + IP+ KCSGS RS I
Sbjct: 143 HYLSEWIRKNSGIVYHYSSSTGSRV-------IPDSA-KCSGSGKPVRSII 185
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V C KGL VP +P ++T L+ + L S F + T
Sbjct: 23 ACPSRCSCSGTKVYCNSKGLTAVPTGIPASSTWLSLYDN-------KLQSLPHGVFDKQT 75
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L QN + LP F +L + L N + +P F L+R+
Sbjct: 76 QLKELHLNQNQLQSLPNGVFDKLTKLTALGLHTNQLKSVPDGIFDRLTSLQRI 128
>gi|297464662|ref|XP_001787660.2| PREDICTED: G-protein coupled receptor 124 [Bos taurus]
Length = 1052
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 88/210 (41%), Gaps = 31/210 (14%)
Query: 73 IPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLE 132
+P KCSG E+P G P+ P R G D E P LLP +T L L
Sbjct: 39 VPIRSCKCSG--ERPKGLSGGAPN-PARRRVVCGGGDLPEP---PDPGLLPNSTVTLLLS 92
Query: 133 QNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
N IT L AF L ++DL N IS V AF GL L L L+NN + L G F
Sbjct: 93 NNKITGLRSGAFLGLSLLEKLDLRNNVISTVQPGAFLGLGELKRLDLSNNRIGCLTSGTF 152
Query: 193 AELFRLRTLRISENSF------------------------ICDCHLSWLHRWLK-RYPRL 227
L RL L IS N F CDCHL WL W + R +L
Sbjct: 153 QGLPRLLRLNISGNIFSSLQPGVFDELPALKAVDFGTEFLTCDCHLRWLLPWAQNRSLQL 212
Query: 228 GLYTKCFAPSHIKGQNILDIPEHEFKCSGS 257
T C PS + Q + + E + +C G+
Sbjct: 213 SERTLCAYPSALHAQALAGLQEAQLRCEGA 242
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTKCFAPS 63
++ N + L GVF EL L+ + CDCHL WL W + R +L T C PS
Sbjct: 163 ISGNIFSSLQPGVFDELPALKAVDFGTEFLTCDCHLRWLLPWAQNRSLQLSERTLCAYPS 222
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ Q + + E + +C G +E
Sbjct: 223 ALHAQALAGLQEAQLRCEGALE 244
>gi|284010884|dbj|BAI66917.1| variable lymphocyte receptor B [Eptatretus burgeri]
Length = 197
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 68/129 (52%), Gaps = 1/129 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C +G VP +P +TT L L N + LP F L +DL
Sbjct: 23 ACPSRCSCSGTEVECYSQGRTSVPSGIPASTTWLSLSSNKLQSLPHGVFDKLTSLTYLDL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
S NQ+ + F L LT+L L+ N L +PDGVF L L+T+ +S N + C C +
Sbjct: 83 SYNQLQSLPDGVFDKLTQLTTLYLSYNQLKSVPDGVFDRLTSLQTIYLSSNPWDCTCPGV 142
Query: 215 SWLHRWLKR 223
+L RW ++
Sbjct: 143 DYLSRWSQK 151
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 46/113 (40%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C +G VP +P +TT L+ + L S F + T
Sbjct: 23 ACPSRCSCSGTEVECYSQGRTSVPSGIPASTTWLS-------LSSNKLQSLPHGVFDKLT 75
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L N + LP F +L + L N + +P F L+ +
Sbjct: 76 SLTYLDLSYNQLQSLPDGVFDKLTQLTTLYLSYNQLKSVPDGVFDRLTSLQTI 128
>gi|47219765|emb|CAG03392.1| unnamed protein product [Tetraodon nigroviridis]
Length = 392
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 109/243 (44%), Gaps = 26/243 (10%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAPSH 64
+N L L + + L LR+ N + C C L L R L+ LG + +C P
Sbjct: 65 HNRLETLSEETLIPMPGLTYLRLYHNPWNCLCPLDSLIRTLQIPSNRNLGNHARCAEPIQ 124
Query: 65 IKGQNILDIPEHEFKCSGPVE--KPTGECAAEPSCPHPCRC-ADGI------------VD 109
+KG+ + + E C P PT E P+ P P R AD +D
Sbjct: 125 LKGRKLKQV-NPEMLCLDPQTPGDPT-EDPGLPTDPRPIRTKADATTTCHTYLYPDIRMD 182
Query: 110 CREKG-------LNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISK 162
C +G L +VP +PE + L N I+ L K F K LR +++S+N +
Sbjct: 183 CSNRGKFLDDGRLTEVPAGVPEDVVHIDLSNNSISHLKAKDFLGTKSLRTLNISRNHMQH 242
Query: 163 VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK 222
+F GL L L L++NNL ++ GV +L+ L L++ N ++CD + ++ WL
Sbjct: 243 ADTGSFSGLLHLQILDLSSNNLHFIQYGVLEDLYFLSELKLGGNPWVCDYSIHYMVYWLH 302
Query: 223 RYP 225
+P
Sbjct: 303 LHP 305
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 111/289 (38%), Gaps = 58/289 (20%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
L L +N I L F Y + +DL +NQIS V AFQGL LT+L L +N L L
Sbjct: 12 HLLLARNRIKVLRQGGFLGYDSVTSLDLQQNQISFVEEGAFQGLGGLTTLLLQHNRLETL 71
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAPSHIKGQNIL 245
+ + L LR+ N + C C L L R L+ LG + +C P +KG+ +
Sbjct: 72 SEETLIPMPGLTYLRLYHNPWNCLCPLDSLIRTLQIPSNRNLGNHARCAEPIQLKGRKLK 131
Query: 246 DI-PEH---EFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRC 301
+ PE + + G E TD P + + A +C H
Sbjct: 132 QVNPEMLCLDPQTPGDPTEDPG------LPTDPRPIRT--------KADATTTC-HTYLY 176
Query: 302 ADGIVDCREKG-------LNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN 354
D +DC +G L +VP +PE +V ID
Sbjct: 177 PDIRMDCSNRGKFLDDGRLTEVPAGVPED------VVHID-------------------- 210
Query: 355 RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLR 403
L N I+ L K F K LR + + +N + +F+ L+
Sbjct: 211 ----LSNNSISHLKAKDFLGTKSLRTLNISRNHMQHADTGSFSGLLHLQ 255
>gi|392353188|ref|XP_003751421.1| PREDICTED: LOW QUALITY PROTEIN: probable G-protein coupled receptor
125 [Rattus norvegicus]
Length = 1241
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 82/201 (40%), Gaps = 34/201 (16%)
Query: 89 GECAAEPSCPHPCRC--------ADGIVDCREKGLNKV--PILLPEATTELRLEQNDITE 138
G A C H R A+G V C L +V P LP T L L N I+E
Sbjct: 22 GAVALPAGCKHDGRARGTGRAAGAEGKVVCSSLELAQVLXPDTLPNRTVTLILSNNKISE 81
Query: 139 LPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL-------------- 184
L +F+ L R+DL N IS++A AF GL SL L L NN +
Sbjct: 82 LKNGSFSGLSLLERLDLRNNLISRIAPGAFWGLSSLKRLDLTNNRIGCLNADVFRGLTNL 141
Query: 185 ----------TYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCF 234
T L G F L LR+L +CDC++ W+HRW+K T+C
Sbjct: 142 VRLNLSGNLFTSLSQGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCV 201
Query: 235 APSHIKGQNILDIPEHEFKCS 255
P ++ Q + + + C
Sbjct: 202 YPKSLQAQPVTGVKQELLTCG 222
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N T L G F L LR+L +CDC++ W+HRW+K T+C P
Sbjct: 146 LSGNLFTSLSQGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCVYPKS 205
Query: 65 IKGQNILDIPEHEFKCSGPVEKPT 88
++ Q + + + C P+E P+
Sbjct: 206 LQAQPVTGVKQELLTCGPPLELPS 229
>gi|284010932|dbj|BAI66941.1| variable lymphocyte receptor B [Eptatretus burgeri]
Length = 186
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 77/171 (45%), Gaps = 14/171 (8%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+CR K L P +P TT L L+ N + +P F +L R+DL
Sbjct: 23 ACPSRCSCSGTTVNCRSKSLTSFPSGIPSRTTVLYLDGNKLQSIPSGVFDKLTQLTRLDL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
NQ+ + F L LT L L N L +PDGVF L L+ + + N + C C +
Sbjct: 83 YTNQLKSLPHGVFDKLSKLTHLELQGNQLKSVPDGVFDRLTSLQKIWLYSNPWDCTCPGI 142
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKI 265
+L +W+ ++ + + P KCSGS RS I
Sbjct: 143 RYLSQWINKHSGIIIKDGSVNP-------------DSAKCSGSGKPVRSII 180
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 48/113 (42%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+CR K L P +P TT L +D L S S F + T
Sbjct: 23 ACPSRCSCSGTTVNCRSKSLTSFPSGIPSRTTVL-------YLDGNKLQSIPSGVFDKLT 75
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+R L N + LP F +L + L+ N + +P F L+++
Sbjct: 76 QLTRLDLYTNQLKSLPHGVFDKLSKLTHLELQGNQLKSVPDGVFDRLTSLQKI 128
>gi|348518173|ref|XP_003446606.1| PREDICTED: leucine-rich repeat-containing protein 3-like
[Oreochromis niloticus]
Length = 262
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 84/158 (53%), Gaps = 8/158 (5%)
Query: 96 SCPHPCRCAD---GIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRR 152
+CP C C + +V C + L +P LP+ T L L N I +P AFA+ RLR
Sbjct: 35 ACPKLCHCTERNGMVVQCTSRNLESIPPNLPKDTVVLLLSSNRIRHVPKGAFADLHRLRE 94
Query: 153 IDLSKNQISKVAVDAFQGL-KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICD 211
+DLS N + V V AFQG+ ++L +L L+NN+L+ LP FA+L +R+S+N + C+
Sbjct: 95 LDLSHNALESVEVGAFQGVSEALRTLDLSNNHLSSLPRDTFAKLH--ARIRLSQNPWHCE 152
Query: 212 CHLSWLHRWLKRYPRLGLYTKCFAPSHIK--GQNILDI 247
C L R L+ P CF + GQ ++ +
Sbjct: 153 CSLQETLRELRLDPETVNEVSCFTSEQEEYVGQPVIQV 190
>gi|76162336|gb|ABA40237.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 167
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 80/169 (47%), Gaps = 15/169 (8%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC K L VP +P T L L N IT+L P F + L ++L
Sbjct: 1 ACPSQCSCSGTTVDCSGKSLASVPTGIPTTTQVLGLSSNQITKLEPGVFDSLTALTFLNL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
NQ++ + V F L LT L LNNN L +P GVF L L + + +N + C C +
Sbjct: 61 GNNQLTALPVGVFDKLTQLTYLFLNNNQLKSVPRGVFDNLKSLTHIWLYDNPWDCKCTDI 120
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L W+ ++ + P + N+ KCSG++ R+
Sbjct: 121 LYLKNWIVQHASI------VNPGNGGVDNV--------KCSGTNTPVRA 155
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 46/113 (40%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C+ VDC K L VP +P T L + I +++ + S + F
Sbjct: 1 ACPSQCSCSGTTVDCSGKSLASVPTGIPTTTQVLGLSSNQITKLEPGVFDSLTALTF--- 57
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N +T LP F +L + L N + +P F N K L +
Sbjct: 58 ----LNLGNNQLTALPVGVFDKLTQLTYLFLNNNQLKSVPRGVFDNLKSLTHI 106
>gi|380786071|gb|AFE64911.1| relaxin receptor 1 isoform 1 [Macaca mulatta]
Length = 757
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 83 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPK 142
P E T EC S P C C +DC E L VP + T + L+ N I +LPP
Sbjct: 87 PFEAETSECLVS-SVPVQCLCQGLELDCDETNLRAVPSV-SSNVTAMSLQWNLIRKLPPD 144
Query: 143 AFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLR 202
F NY L+++ L N+I+ +++ AF+GL SLT L L++N +T+L GVF +L RL L
Sbjct: 145 CFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLI 204
Query: 203 ISEN 206
I +N
Sbjct: 205 IEDN 208
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 47/125 (37%), Gaps = 32/125 (25%)
Query: 281 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL 340
P E T EC S P C C +DC E L V P ++ +T M
Sbjct: 87 PFEAETSECLVS-SVPVQCLCQGLELDCDETNLRAV----PSVSSNVTAM---------- 131
Query: 341 LYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYK 400
L+ N I +LPP F NY L+++ L+ N IT + AF
Sbjct: 132 -----------------SLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLN 174
Query: 401 RLRRM 405
L ++
Sbjct: 175 SLTKL 179
Score = 38.1 bits (87), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 81/202 (40%), Gaps = 35/202 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N +T+L GVF +L RL L I +N HLS + +P
Sbjct: 181 LSHNRITFLKPGVFEDLHRLEWLIIEDN------HLSRI-----------------SPPT 217
Query: 65 IKGQN--ILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCRE-KGLNKVPIL 121
G N IL + + P +P C H R ++ L + +
Sbjct: 218 FYGLNSLILLVLMNNVLTRLP---------DKPLCQHMPRLHWLDLEGNHIHNLRNLTFI 268
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
T L + +N I L FA ++L +DL N+I + F+ LK L+ L L+
Sbjct: 269 SCSNLTVLVMRKNKINYLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSY 328
Query: 182 NNLTYLPDGVFAELFRLRTLRI 203
N + + F L +L++L +
Sbjct: 329 NPIQKIQANQFDYLVKLKSLSL 350
>gi|392333075|ref|XP_003752785.1| PREDICTED: probable G-protein coupled receptor 125 [Rattus
norvegicus]
Length = 1307
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 82/201 (40%), Gaps = 34/201 (16%)
Query: 89 GECAAEPSCPHPCRC--------ADGIVDCREKGLNKV--PILLPEATTELRLEQNDITE 138
G A C H R A+G V C L +V P LP T L L N I+E
Sbjct: 22 GAVALPAGCKHDGRARGTGRAAGAEGKVVCSSLELAQVLPPDTLPNRTVTLILSNNKISE 81
Query: 139 LPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL-------------- 184
L +F+ L R+DL N IS++A AF GL SL L L NN +
Sbjct: 82 LKNGSFSGLSLLERLDLRNNLISRIAPGAFWGLSSLKRLDLTNNRIGCLNADVFRGLTNL 141
Query: 185 ----------TYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCF 234
T L G F L LR+L +CDC++ W+HRW+K T+C
Sbjct: 142 VRLNLSGNLFTSLSQGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCV 201
Query: 235 APSHIKGQNILDIPEHEFKCS 255
P ++ Q + + + C
Sbjct: 202 YPKSLQAQPVTGVKQELLTCG 222
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N T L G F L LR+L +CDC++ W+HRW+K T+C P
Sbjct: 146 LSGNLFTSLSQGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCVYPKS 205
Query: 65 IKGQNILDIPEHEFKCSGPVEKPT 88
++ Q + + + C P+E P+
Sbjct: 206 LQAQPVTGVKQELLTCGPPLELPS 229
>gi|301761974|ref|XP_002916409.1| PREDICTED: LOW QUALITY PROTEIN: probable G-protein coupled receptor
125-like [Ailuropoda melanoleuca]
Length = 1365
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 94/228 (41%), Gaps = 36/228 (15%)
Query: 60 FAPSHIKGQ-NILDIPEHEFKCSGPVEKPTGECAAEPSCPH-----PCRCADGIVDCREK 113
F +GQ +L +P F+ GPV E +C + C A G V C
Sbjct: 55 FTAGAAEGQKQLLRVP---FRREGPVPCSGAFGTNEKTCSNRRHEVACGGAGGKVVCSSL 111
Query: 114 GLNKV---PILLPEATTELRLEQNDITELP------------------------PKAFAN 146
L +V LLP T L L N I+EL P AF
Sbjct: 112 ELAQVLPPDTLLPNRTVTLILSNNKISELKNGSFSGLSLLERLDLRNNLISSIDPGAFWG 171
Query: 147 YKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
L+R+DL+ N+I + D F+GL +L L L+ N + L G F L LR+L
Sbjct: 172 LSSLKRLDLTNNRIGCLNADIFRGLTNLVRLNLSGNLFSSLSQGTFDYLGSLRSLEFQTE 231
Query: 207 SFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
+CDC++ W+HRW+K T+C P ++ Q + + + C
Sbjct: 232 YLLCDCNILWMHRWVKERNITVRDTRCVYPKSLQAQPVTGVKQELLTC 279
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N + L G F L LR+L +CDC++ W+HRW+K T+C P
Sbjct: 204 LSGNLFSSLSQGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCVYPKS 263
Query: 65 IKGQNILDIPEHEFKCSGPVEKPT 88
++ Q + + + C P+E P+
Sbjct: 264 LQAQPVTGVKQELLTCDPPLELPS 287
>gi|70955603|gb|AAZ16363.1| variable lymphocyte receptor B [Eptatretus burgeri]
Length = 259
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 80/171 (46%), Gaps = 11/171 (6%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC KGL VP +P TT L L+ N + +P F +L + L
Sbjct: 23 ACPSRCSCSGTGVDCNSKGLTAVPTGIPARTTYLNLDSNKLQSIPSGVFDKLTKLTNLYL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
+NQ+ + F L L L L+NN L +P G+F L +L T+ + +N + C+C +
Sbjct: 83 DRNQLKSLPDGVFDKLTKLKQLELDNNQLKSIPQGMFDNLKKLDTIYLYKNPWDCECPGI 142
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKI 265
+L W+++ + Y N + KCSGS RS I
Sbjct: 143 HYLSEWIRKNSGIVYYW----------TNRKVLQPDSAKCSGSGKPVRSII 183
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 8/110 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ VDC KGL VP +P TT L +D L S S F + T
Sbjct: 23 ACPSRCSCSGTGVDCNSKGLTAVPTGIPARTTYLN-------LDSNKLQSIPSGVFDKLT 75
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
+ L++N + LP F +L+++ L+ N + +P F N K+L
Sbjct: 76 KLTNLYLDRNQLKSLPDGVFDKLTKLKQLELDNNQLKSIPQGMFDNLKKL 125
>gi|70955587|gb|AAZ16355.1| variable lymphocyte receptor B [Eptatretus burgeri]
Length = 257
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 79/171 (46%), Gaps = 13/171 (7%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC K L VP + +TT L L N I LP F +L + L
Sbjct: 23 ACPSRCSCSGTTVDCSWKSLTSVPSGISSSTTVLWLGGNKIPSLPSGVFDKLTKLTELYL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
N++ + F L SLT L LNNN L +PDG+F L L+ + + N + C C +
Sbjct: 83 WGNKLQSLPHGVFDKLTSLTKLGLNNNQLKSVPDGIFDRLTSLQRIYLYSNPWHCTCPGI 142
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKI 265
+L +W+ ++ S I Q+ + KCSGS RS I
Sbjct: 143 RYLSQWINKH------------SGIIRQSGGSVNPDSAKCSGSGKPVRSII 181
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 47/113 (41%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ VDC K L VP + +TT L + +++ S S F + T
Sbjct: 23 ACPSRCSCSGTTVDCSWKSLTSVPSGISSSTTVL--WLGGNKIP-----SLPSGVFDKLT 75
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L N + LP F L ++ L N + +P F L+R+
Sbjct: 76 KLTELYLWGNKLQSLPHGVFDKLTSLTKLGLNNNQLKSVPDGIFDRLTSLQRI 128
>gi|47059055|ref|NP_997617.1| relaxin receptor 1 precursor [Mus musculus]
gi|81864127|sp|Q6R6I7.1|RXFP1_MOUSE RecName: Full=Relaxin receptor 1; AltName: Full=Leucine-rich
repeat-containing G-protein coupled receptor 7; AltName:
Full=Relaxin family peptide receptor 1
gi|40891579|gb|AAR97515.1| leucine-rich repeat-containing G-protein coupled receptor 7 [Mus
musculus]
gi|148683510|gb|EDL15457.1| relaxin/insulin-like family peptide receptor 1, isoform CRA_b [Mus
musculus]
gi|162319566|gb|AAI56371.1| Relaxin/insulin-like family peptide receptor 1 [synthetic
construct]
gi|225000672|gb|AAI72664.1| Relaxin/insulin-like family peptide receptor 1 [synthetic
construct]
Length = 758
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 72/131 (54%), Gaps = 2/131 (1%)
Query: 76 HEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQND 135
++ + E T EC S P C C D +DC E L VP + T + L++N
Sbjct: 80 YKLASTNSFEAETSECLV-GSVPMHCLCRDLELDCDEANLRAVPSVSSNVTV-MSLQRNF 137
Query: 136 ITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I LPP F Y L+++ L N+I V+V AF+GL+SLT L L++N +T+L GVF +L
Sbjct: 138 IRTLPPNGFRKYHELQKLCLQNNRIHSVSVSAFRGLRSLTKLYLSHNRITFLKPGVFEDL 197
Query: 196 FRLRTLRISEN 206
RL L I +N
Sbjct: 198 HRLEWLIIEDN 208
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 10/124 (8%)
Query: 283 EKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLY 342
E T EC S P C C D +DC E L VP ++ V++ + + +
Sbjct: 89 EAETSECLV-GSVPMHCLCRDLELDCDEANLRAVP--------SVSSNVTVMSLQRNFIR 139
Query: 343 SYISNNFKRWTNRSRR-LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKR 401
+ N F+++ + L+ N I + AF + L ++ L N IT L P F + R
Sbjct: 140 TLPPNGFRKYHELQKLCLQNNRIHSVSVSAFRGLRSLTKLYLSHNRITFLKPGVFEDLHR 199
Query: 402 LRRM 405
L +
Sbjct: 200 LEWL 203
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 80/200 (40%), Gaps = 31/200 (15%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N +T+L GVF +L RL L I +N HLS + +P
Sbjct: 181 LSHNRITFLKPGVFEDLHRLEWLIIEDN------HLSRI-----------------SPLT 217
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCA-DGIVDCREKGLNKVPILLP 123
G N L + + +P C H R R L + +
Sbjct: 218 FYGLNSLILLV-------LMNNALTRLPDKPLCQHMPRLHWLDFEGNRIHNLRNLTFISC 270
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
T L + +N I L AF + ++L +DL N+I + + F+ LK L+ L ++ N
Sbjct: 271 NNLTVLVMRKNKINYLNEHAFTHLQKLDELDLGSNKIENLPPNIFKDLKELSQLNISYNP 330
Query: 184 LTYLPDGVFAELFRLRTLRI 203
+ + F L +L++L +
Sbjct: 331 IQKIEVNQFDCLAKLKSLSL 350
>gi|284010864|dbj|BAI66907.1| variable lymphocyte receptor B [Eptatretus burgeri]
Length = 255
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 59/111 (53%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC KGL VP +P +TT L+L N + LP F +L ++ L
Sbjct: 23 ACPSRCSCSGTSVDCDSKGLTSVPSGIPSSTTNLQLYSNKLQSLPSGVFDKLTQLTKLSL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
S+NQ+ V F L L L L NN L LPDGVF EL L L + +N
Sbjct: 83 SQNQLQSVPNGVFDKLTQLQKLWLYNNKLQSLPDGVFDELTSLTQLYLHQN 133
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ VDC KGL VP +P +TT L ++ L S S F + T
Sbjct: 23 ACPSRCSCSGTSVDCDSKGLTSVPSGIPSSTTNL-------QLYSNKLQSLPSGVFDKLT 75
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ L QN + +P F +L+++ L N + LP F L ++
Sbjct: 76 QLTKLSLSQNQLQSVPNGVFDKLTQLQKLWLYNNKLQSLPDGVFDELTSLTQL 128
>gi|52789939|gb|AAU87578.1| LGI3, partial [Gallus gallus]
Length = 274
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 80/174 (45%), Gaps = 5/174 (2%)
Query: 106 GIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAV 165
+ RE +P L L L N T + AF L+ + + N I ++
Sbjct: 20 AFTEIREAAFAHIPSL-----QFLLLNSNKFTLIGDNAFTGLPHLQYLFIENNDIQALSK 74
Query: 166 DAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP 225
AF+GLKSLT L+L NNNL LP +F L L L + N+ +CDC L WL WL+
Sbjct: 75 GAFRGLKSLTHLSLANNNLRSLPRDLFKPLDILSDLDLRGNALVCDCKLKWLVEWLEGTN 134
Query: 226 RLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
C +P+ ++GQ + D+P +F C + + + S + + Y S
Sbjct: 135 TSVPAVACSSPAPLEGQRLRDLPLRDFHCVTTDFAVHQVLPFQAVSAEPYTYAS 188
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L NNNL LP +F L L L + N+ +CDC L WL WL+ C +P+
Sbjct: 87 SLANNNLRSLPRDLFKPLDILSDLDLRGNALVCDCKLKWLVEWLEGTNTSVPAVACSSPA 146
Query: 64 HIKGQNILDIPEHEFKC 80
++GQ + D+P +F C
Sbjct: 147 PLEGQRLRDLPLRDFHC 163
>gi|410900444|ref|XP_003963706.1| PREDICTED: uncharacterized protein LOC101064463 [Takifugu rubripes]
Length = 1154
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 70/139 (50%), Gaps = 1/139 (0%)
Query: 119 PILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLT 178
P LP T L L N I+ L +F L ++DL N IS V AF+GL +L L
Sbjct: 55 PSFLPNRTVSLNLSNNKISLLRNGSFYGLAALEKLDLKNNLISTVEPGAFRGLLALRRLD 114
Query: 179 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFAPS 237
L+NN + L +FA+L L L S ++ CDC L WL W + ++G T C P+
Sbjct: 115 LSNNRIGCLHPDMFADLGSLLKLHFSTDALFCDCQLKWLLLWARSNAVKIGNDTACMFPA 174
Query: 238 HIKGQNILDIPEHEFKCSG 256
++G + + EH+ C G
Sbjct: 175 RLRGLELRGLREHQLHCDG 193
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFAPS 63
L+NN + L +FA+L L L S ++ CDC L WL W + ++G T C P+
Sbjct: 115 LSNNRIGCLHPDMFADLGSLLKLHFSTDALFCDCQLKWLLLWARSNAVKIGNDTACMFPA 174
Query: 64 HIKGQNILDIPEHEFKCSGPVEKP 87
++G + + EH+ C GP+E P
Sbjct: 175 RLRGLELRGLREHQLHCDGPLELP 198
>gi|284010904|dbj|BAI66927.1| variable lymphocyte receptor B [Eptatretus burgeri]
Length = 180
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 75/171 (43%), Gaps = 20/171 (11%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C + L VP +P + T L L N + LP F L+ + L
Sbjct: 23 ACPSRCSCSGTNVYCDSRSLTSVPSGIPSSATRLDLHVNKLQSLPSGVFDKLTELKELRL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ+ + F L LT+L L +N L +PDGVF L L++L + N + C CH +
Sbjct: 83 YNNQLQSLPSGVFDKLTQLTNLQLYSNQLKSVPDGVFDRLTSLQSLYVYNNPWDCSCHGV 142
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKI 265
+L RWL+ P Y KCSGS RS I
Sbjct: 143 DYLSRWLQNNPNKEKY-------------------DSAKCSGSGKPVRSII 174
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V C + L VP +P + T L V+ L S S F + T
Sbjct: 23 ACPSRCSCSGTNVYCDSRSLTSVPSGIPSSATRLDLHVNK-------LQSLPSGVFDKLT 75
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ RL N + LP F +L ++L N + +P F L+ +
Sbjct: 76 ELKELRLYNNQLQSLPSGVFDKLTQLTNLQLYSNQLKSVPDGVFDRLTSLQSL 128
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-LSWLHRWLKRYP 51
L +N L +PDGVF L L++L + N + C CH + +L RWL+ P
Sbjct: 106 LYSNQLKSVPDGVFDRLTSLQSLYVYNNPWDCSCHGVDYLSRWLQNNP 153
>gi|26380444|dbj|BAC25436.1| unnamed protein product [Mus musculus]
Length = 385
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 82/201 (40%), Gaps = 35/201 (17%)
Query: 89 GECAAEPSCPHPCRC---------ADGIVDCREKGLNKV--PILLPEATTELRLEQNDIT 137
G A C H R A+G V C L +V P LP T L L N I+
Sbjct: 66 GAAALPAGCKHDGRARGTCRAAAAAEGKVVCSSLELAQVLPPDTLPNRTVTLILSNNKIS 125
Query: 138 ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL------------- 184
EL +F+ L R+DL N IS++A AF GL SL L L NN +
Sbjct: 126 ELKNGSFSGLSLLERLDLRNNLISRIAPGAFWGLSSLKRLDLTNNRIGCLNADVFRGLTN 185
Query: 185 -----------TYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKC 233
T L G F L LR+L +CDC++ W+HRW+K T+C
Sbjct: 186 LVRLNLSGNLFTSLSQGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRC 245
Query: 234 FAPSHIKGQNILDIPEHEFKC 254
P ++ Q + + + C
Sbjct: 246 VYPQSLQAQPVTGVKQELLTC 266
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N T L G F L LR+L +CDC++ W+HRW+K T+C P
Sbjct: 191 LSGNLFTSLSQGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCVYPQS 250
Query: 65 IKGQNILDIPEHEFKCSGPVEKPT 88
++ Q + + + C P+E P+
Sbjct: 251 LQAQPVTGVKQELLTCDPPLELPS 274
>gi|410907105|ref|XP_003967032.1| PREDICTED: probable G-protein coupled receptor 125-like [Takifugu
rubripes]
Length = 1338
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 64/125 (51%)
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL 184
A +L L N I+ + P AF L+R+DLS N I + VD F+GL SL L L+ N
Sbjct: 81 ALEKLDLRSNLISSVEPGAFLGLAALKRLDLSNNSIGCLNVDVFKGLASLMRLNLSGNVF 140
Query: 185 TYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNI 244
+ + G F L L++L +CDC+L WL RW+K TKC P ++GQ
Sbjct: 141 STIAPGTFDSLVSLKSLEFQTAFLLCDCNLLWLLRWIKERSVAVKSTKCSYPQSLQGQLF 200
Query: 245 LDIPE 249
PE
Sbjct: 201 TSRPE 205
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 1 MPRTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCF 60
M L+ N + + G F L L++L +CDC+L WL RW+K TKC
Sbjct: 131 MRLNLSGNVFSTIAPGTFDSLVSLKSLEFQTAFLLCDCNLLWLLRWIKERSVAVKSTKCS 190
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEKPT 88
P ++GQ PE F C P+E P+
Sbjct: 191 YPQSLQGQLFTSRPE-LFTCDAPLELPS 217
>gi|317374950|gb|ADV16385.1| toll-like receptor 1 [Crassostrea gigas]
gi|317374952|gb|ADV16386.1| toll-like receptor 1 [Crassostrea gigas]
Length = 1179
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 110/234 (47%), Gaps = 32/234 (13%)
Query: 4 TLNNNNLTYLPDGVFA---ELFRLRTLRISENSFICDCHLSWLHRWLKR------YPRLG 54
+L N LT L A + R + IS+N F CDC L WL + + +P +G
Sbjct: 577 SLKGNKLTTLAMNDLAVPIDQSRRTIVYISDNPFDCDCKLIWLRKKVNEISMNSGFPMVG 636
Query: 55 LYTKCFAPSHIKGQNILD------IPEHEFKCSGPVE--KPTGECAAEP-----SCPHPC 101
++ KG I + IP + C E K C EP CP+ C
Sbjct: 637 ---DIYSVQCEKGYRIQEPVPFYSIPTRDMLCEYTTECTKNCYCCEYEPCDCKFVCPYGC 693
Query: 102 RC---ADGI----VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRID 154
C AD + V C ++GL K+P P ++TE+ L++N+I+E+ +F LR I
Sbjct: 694 SCYSSADFMTTHYVQCTKRGLTKIPAGFPASSTEVSLDRNNISEIYSSSFVGLIYLRVIH 753
Query: 155 LSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
L + I+ +A ++F GL L +L LNNN L + GVF +L+ L L + N+
Sbjct: 754 LDHSGITTLANNSFIGLLQLKTLYLNNNELQEINRGVFNKLWNLTELHLEYNNI 807
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 128/292 (43%), Gaps = 60/292 (20%)
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN 180
+ P+ L L N+I+++ AF +Y+ LRR+ L N+++ +A++
Sbjct: 544 MFPDNVENLDLSYNNISDITEYAFYSYEYLRRLSLKGNKLTTLAMNDL------------ 591
Query: 181 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKR------YPRLGLYTKCF 234
V + R + IS+N F CDC L WL + + +P +G +
Sbjct: 592 ---------AVPIDQSRRTIVYISDNPFDCDCKLIWLRKKVNEISMNSGFPMVG---DIY 639
Query: 235 APSHIKGQNILD-IPEHEFKCSGSSMETRSKI--YREECSTDFHPYNSCPVEKPTGECAA 291
+ KG I + +P + S+ TR + Y EC+ + + C +P C
Sbjct: 640 SVQCEKGYRIQEPVPFY-------SIPTRDMLCEYTTECTKNCY----CCEYEP---CDC 685
Query: 292 EPSCPHPCRC---ADGI----VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSY 344
+ CP+ C C AD + V C ++GL K+P P ++TE VS+DR + +YS
Sbjct: 686 KFVCPYGCSCYSSADFMTTHYVQCTKRGLTKIPAGFPASSTE----VSLDRNNISEIYS- 740
Query: 345 ISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
S+ R L+ + IT L +F +L+ + L N++ E+ F
Sbjct: 741 -SSFVGLIYLRVIHLDHSGITTLANNSFIGLLQLKTLYLNNNELQEINRGVF 791
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L+L+ N +T L + LR +DL N+IS ++ + FQ + L L +N NNLT +
Sbjct: 315 DLQLQGNSVTMLNRTVLRSLSSLRNLDLGDNRISDLSTEMFQAMAELQFLHVNQNNLTEI 374
Query: 188 PDGVFAELFRLRTLRISEN 206
+ F L +L L + N
Sbjct: 375 RNNTFLGLQKLVALDLRGN 393
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL 184
+ EL L N ++E+P +F N L+ +DLS N I ++ +A +GL++L +L L NN++
Sbjct: 408 SLAELDLSNNCLSEIP--SFNNATTLQSLDLSSNYIQLLSSNALKGLQNLQNLVLFNNSI 465
Query: 185 TYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK 222
+ GVF + L+T S N +HR LK
Sbjct: 466 KQIETGVFRFVPALQTADFSFNE---------IHRILK 494
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Query: 108 VDCREKGLNKVPILLPEATTELR---LEQNDITELPPKAFANYKRLRRIDLSKNQISKVA 164
+D + ++ + + +A EL+ + QN++TE+ F ++L +DL N+I +
Sbjct: 340 LDLGDNRISDLSTEMFQAMAELQFLHVNQNNLTEIRNNTFLGLQKLVALDLRGNRIKTIE 399
Query: 165 VDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
AF SL L L+NN L+ +P F L++L +S N
Sbjct: 400 KGAFSHFVSLAELDLSNNCLSEIPS--FNNATTLQSLDLSSN 439
Score = 41.2 bits (95), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 45/92 (48%)
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSL 174
LN+ + + L L N I++L + F L+ + +++N ++++ + F GL+ L
Sbjct: 326 LNRTVLRSLSSLRNLDLGDNRISDLSTEMFQAMAELQFLHVNQNNLTEIRNNTFLGLQKL 385
Query: 175 TSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
+L L N + + G F+ L L +S N
Sbjct: 386 VALDLRGNRIKTIEKGAFSHFVSLAELDLSNN 417
>gi|119928577|dbj|BAF43113.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 169
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 68/133 (51%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C+ + VP +P T ELRL N IT+L P F + L + L
Sbjct: 11 ACPARCSCSGASVECQSRSFASVPAGIPTTTRELRLYTNQITKLEPGVFDSLTALTYLHL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ++ + V F L LT L L NN L +P G F L L + + N + C C +
Sbjct: 71 GANQLTALPVGVFDKLTKLTHLALYNNQLKGVPRGAFDNLKSLTYIWLYNNPWDCACSDI 130
Query: 215 SWLHRWLKRYPRL 227
+L RW+ ++P +
Sbjct: 131 LYLSRWISQHPGV 143
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTEL-TYMVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ V+C+ + VP +P T EL Y I +++ + S + +
Sbjct: 11 ACPARCSCSGASVECQSRSFASVPAGIPTTTRELRLYTNQITKLEPGVFDSLTALTY--- 67
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
L N +T LP F +L + L N + +P AF N K L
Sbjct: 68 ----LHLGANQLTALPVGVFDKLTKLTHLALYNNQLKGVPRGAFDNLKSL 113
>gi|284010882|dbj|BAI66916.1| variable lymphocyte receptor B [Eptatretus burgeri]
Length = 208
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 79/171 (46%), Gaps = 13/171 (7%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ + C KGL VP +P TT L L N + LP F L + L
Sbjct: 23 ACPSRCSCSGTEIRCISKGLTSVPTGIPARTTYLTLYDNKLQSLPHGVFDKLTSLTELYL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
S N++ + F L SLT L L+NN L +PDG+F L L+ + + N + C C +
Sbjct: 83 SDNKLQSLPSGVFDKLTSLTKLGLDNNQLKSVPDGIFDRLTSLQKIWLYSNPWDCTCPGI 142
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKI 265
+L +W+ ++ S I Q+ + KCSGS RS I
Sbjct: 143 RYLSQWINKH------------SGIIIQSGGSVNPDSAKCSGSGKPVRSII 181
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 47/113 (41%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ + C KGL VP +P TT LT + L S F + T
Sbjct: 23 ACPSRCSCSGTEIRCISKGLTSVPTGIPARTTYLTLYDN-------KLQSLPHGVFDKLT 75
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L N + LP F L ++ L+ N + +P F L+++
Sbjct: 76 SLTELYLSDNKLQSLPSGVFDKLTSLTKLGLDNNQLKSVPDGIFDRLTSLQKI 128
>gi|119928581|dbj|BAF43115.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 169
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 13/169 (7%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC + L VP +P T L L+ N IT+L P F +L +DL
Sbjct: 11 ACPARCSCSGTSVDCSARSLASVPAGIPTTTQSLSLQVNQITKLEPGVFDRLTQLTVLDL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
S NQ+ + F L LT L+L +N L +P G F L L + + N + C C +
Sbjct: 71 STNQLQALPAGVFDKLTQLTQLSLRDNQLKSIPRGAFDNLKSLTHIWLFGNPWDCACSDI 130
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L RW+ ++P G+ K + ++ + +CSG++ R+
Sbjct: 131 LYLSRWISQHP--GVVRK----------SDWNVDPDQARCSGTNTPVRA 167
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C+ VDC + L VP +P T L+ V+ I +++ + F R
Sbjct: 11 ACPARCSCSGTSVDCSARSLASVPAGIPTTTQSLSLQVNQITKLEPGV--------FDRL 62
Query: 353 TNRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
T + L N + LP F +L ++ L N + +P AF N K L +
Sbjct: 63 TQLTVLDLSTNQLQALPAGVFDKLTQLTQLSLRDNQLKSIPRGAFDNLKSLTHI 116
>gi|449490298|ref|XP_002195449.2| PREDICTED: leucine-rich repeat-containing G-protein coupled
receptor 6-like [Taeniopygia guttata]
Length = 981
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 77/143 (53%), Gaps = 10/143 (6%)
Query: 89 GECAAEPSCPHPCRC-ADGI---VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAF 144
E A PSCP C C DGI VDC E GL++VP L T L L N+I++L P A
Sbjct: 47 AEPGAAPSCPPQCHCEQDGIALSVDCSELGLSEVPANLSPLTAYLDLSMNNISQLQPSAL 106
Query: 145 ANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRIS 204
+ + L + LS NQIS++ +AF GL SL L L NN L+ +P +L L++LR+
Sbjct: 107 RHLRFLEELRLSGNQISRIPGEAFSGLYSLKILMLQNNQLSRIPAEALRDLPNLQSLRLD 166
Query: 205 EN--SFICD----CHLSWLHRWL 221
N S + D LS H WL
Sbjct: 167 ANLISVVPDRSFEGLLSLRHLWL 189
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 111/290 (38%), Gaps = 40/290 (13%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
L L+ N +TE+P +A + L+ + L+ NQI + AFQ L SL L L+NN + L
Sbjct: 186 HLWLDDNALTEIPVRALNHLPALQAMTLALNQIWNIPDFAFQNLSSLVVLHLHNNRIQSL 245
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDI 247
F L L TL ++ N + R L R LG + NI I
Sbjct: 246 GANGFDGLHSLETLDLNYNELL---EFPGAIRTLGRLQELGFHNN----------NIKAI 292
Query: 248 PEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVD 307
PE+ F ++T H Y++ P++ G+ A + +G D
Sbjct: 293 PENAF-VGNPLLQT------------IHFYDN-PIQF-VGQSAFQYLPKLHTLSLNGATD 337
Query: 308 CRE----KGLNKVPIL-LPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR----- 357
RE KG + +L L A ++ + + N + + R
Sbjct: 338 IREFPDLKGTTSLEVLTLTRAGIHFLPRRMCQQLPSLRVLELSHNQIEELPSFHRCQQLE 397
Query: 358 --RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L+ N I E+ F LR I L N I + P+AF L ++
Sbjct: 398 ELGLQHNKIQEIRADTFVQLMALRSIDLSWNCIQFIHPEAFVTLHSLTKL 447
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 10/123 (8%)
Query: 287 GECAAEPSCPHPCRC-ADGI---VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLY 342
E A PSCP C C DGI VDC E GL++VP L T L +S++ + ++
Sbjct: 47 AEPGAAPSCPPQCHCEQDGIALSVDCSELGLSEVPANLSPLTAYLD--LSMNNISQLQPS 104
Query: 343 SYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
+ F RL N I+ +P +AF+ L+ + L+ N ++ +P +A + L
Sbjct: 105 ALRHLRFL----EELRLSGNQISRIPGEAFSGLYSLKILMLQNNQLSRIPAEALRDLPNL 160
Query: 403 RRM 405
+ +
Sbjct: 161 QSL 163
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 124/336 (36%), Gaps = 72/336 (21%)
Query: 100 PCRCADGIVDCR-----EKGLNKVPIL----LPEATTELRLEQNDITELPPKAFANYKRL 150
P R +G++ R + L ++P+ LP A + L N I +P AF N L
Sbjct: 174 PDRSFEGLLSLRHLWLDDNALTEIPVRALNHLP-ALQAMTLALNQIWNIPDFAFQNLSSL 232
Query: 151 RRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTL--------R 202
+ L N+I + + F GL SL +L LN N L P G L RL+ L
Sbjct: 233 VVLHLHNNRIQSLGANGFDGLHSLETLDLNYNELLEFP-GAIRTLGRLQELGFHNNNIKA 291
Query: 203 ISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS-HIKGQN-ILDIPEHEFKCSGSSME 260
I EN+F+ + L +H + +G + P H N DI E +S+E
Sbjct: 292 IPENAFVGNPLLQTIHFYDNPIQFVGQSAFQYLPKLHTLSLNGATDIREFPDLKGTTSLE 351
Query: 261 ----TRSKIYREECSTDFHPYNSCP-------VEKPTGECAAEPSCPHPCRCADGIVDCR 309
TR+ I+ F P C +E + PS H C+
Sbjct: 352 VLTLTRAGIH-------FLPRRMCQQLPSLRVLELSHNQIEELPSF-HRCQ------QLE 397
Query: 310 EKGL--NKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITEL 367
E GL NK+ + + +L + SID L N I +
Sbjct: 398 ELGLQHNKIQEIRADTFVQLMALRSID------------------------LSWNCIQFI 433
Query: 368 PPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLR 403
P+AF L ++ L N + LP A L+
Sbjct: 434 HPEAFVTLHSLTKLDLTDNQLVTLPLDGLAGLTHLK 469
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
LRL+ N I+ +P ++F LR + L N ++++ V A L +L ++TL N + +
Sbjct: 162 SLRLDANLISVVPDRSFEGLLSLRHLWLDDNALTEIPVRALNHLPALQAMTLALNQIWNI 221
Query: 188 PDGVFAELFRLRTLRISEN 206
PD F L L L + N
Sbjct: 222 PDFAFQNLSSLVVLHLHNN 240
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 114/305 (37%), Gaps = 52/305 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+NN + L F L L TL ++ N + R L R LG +
Sbjct: 237 LHNNRIQSLGANGFDGLHSLETLDLNYNELL---EFPGAIRTLGRLQELGFHNN------ 287
Query: 65 IKGQNILDIPEHEFKCS----------GPVEKPTGECAAEPSCPHPCRCADGIVDCRE-- 112
NI IPE+ F + P++ G+ A + +G D RE
Sbjct: 288 ----NIKAIPENAFVGNPLLQTIHFYDNPIQF-VGQSAFQYLPKLHTLSLNGATDIREFP 342
Query: 113 --KGLNKVPIL---------LPEATTE-------LRLEQNDITELPPKAFANYKRLRRID 154
KG + +L LP + L L N I ELP +F ++L +
Sbjct: 343 DLKGTTSLEVLTLTRAGIHFLPRRMCQQLPSLRVLELSHNQIEELP--SFHRCQQLEELG 400
Query: 155 LSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFIC---D 211
L N+I ++ D F L +L S+ L+ N + ++ F L L L +++N + D
Sbjct: 401 LQHNKIQEIRADTFVQLMALRSIDLSWNCIQFIHPEAFVTLHSLTKLDLTDNQLVTLPLD 460
Query: 212 CHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECS 271
H L+ P L ++ F +L++P C+ S + ++ + +
Sbjct: 461 GLAGLTHLKLQGNPAL---SEPFTKESFPKMRVLEVPYAYQCCAYGSCSSFFRVSSQWEA 517
Query: 272 TDFHP 276
D P
Sbjct: 518 EDMAP 522
>gi|41386745|ref|NP_958820.1| relaxin receptor 1 precursor [Rattus norvegicus]
gi|81864126|sp|Q6R6I6.1|RXFP1_RAT RecName: Full=Relaxin receptor 1; AltName: Full=Leucine-rich
repeat-containing G-protein coupled receptor 7; AltName:
Full=Relaxin family peptide receptor 1
gi|40891581|gb|AAR97516.1| leucine-rich repeat-containing G-protein coupled receptor 7 [Rattus
norvegicus]
Length = 758
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 72/131 (54%), Gaps = 2/131 (1%)
Query: 76 HEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQND 135
++ + +E T EC S P C C D +DC E L VP + T + L+ N
Sbjct: 80 YKLTSTNSIEAETSECLV-GSVPMHCLCRDLELDCDEANLRAVPSVSSNVTV-MSLQWNF 137
Query: 136 ITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I LPP +F Y L+++ L N+I V+V AF+GL SLT L L++N +T+L GVF +L
Sbjct: 138 IRTLPPNSFRKYHDLQKLCLQNNKIRSVSVSAFRGLHSLTKLYLSHNRITFLKPGVFEDL 197
Query: 196 FRLRTLRISEN 206
RL L I +N
Sbjct: 198 HRLEWLIIEDN 208
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 18/129 (13%)
Query: 282 VEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLL 341
+E T EC S P C C D +DC E L V P ++ +T M L
Sbjct: 88 IEAETSECLV-GSVPMHCLCRDLELDCDEANLRAV----PSVSSNVTVM--------SLQ 134
Query: 342 YSYIS----NNFKRWTNRSRR-LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
+++I N+F+++ + + L+ N I + AF L ++ L N IT L P F
Sbjct: 135 WNFIRTLPPNSFRKYHDLQKLCLQNNKIRSVSVSAFRGLHSLTKLYLSHNRITFLKPGVF 194
Query: 397 ANYKRLRRM 405
+ RL +
Sbjct: 195 EDLHRLEWL 203
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 80/200 (40%), Gaps = 31/200 (15%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N +T+L GVF +L RL L I +N HLS + +P
Sbjct: 181 LSHNRITFLKPGVFEDLHRLEWLIIEDN------HLSRI-----------------SPLT 217
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCA-DGIVDCREKGLNKVPILLP 123
G N L + + +P C H R R L + +
Sbjct: 218 FYGLNSLILLV-------LMNNALTRLPDKPLCQHMPRLHWLDFEGNRIHNLRNLTFISC 270
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
T L + +N I L AF + ++L +DL N+I + + F+ LK L+ L ++ N
Sbjct: 271 NNLTVLVMRKNKINHLNEHAFTHLQKLDELDLGSNKIENLPPNIFKDLKELSQLNISYNP 330
Query: 184 LTYLPDGVFAELFRLRTLRI 203
+ + F L +L++L +
Sbjct: 331 IQKIEVNQFDYLAKLKSLSL 350
>gi|395847359|ref|XP_003796346.1| PREDICTED: G-protein coupled receptor 124 [Otolemur garnettii]
Length = 1122
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 91/214 (42%), Gaps = 39/214 (18%)
Query: 73 IPEHEFKCSGPVEKPTGECAAEPSCPHPCR----CADGIVDCREKGLNKVPILLPEATTE 128
+P KCSG E+P G + S P+P R C G D E P LLP T
Sbjct: 39 VPIRSCKCSG--ERPKGLSS---SAPNPARRRVVCGGG--DLPEP---PDPGLLPNGTVT 88
Query: 129 LRLEQNDITEL------------------------PPKAFANYKRLRRIDLSKNQISKVA 164
L L N IT L P AF LRR+DLS N+I +
Sbjct: 89 LLLSNNKITGLRNGSFLGLFLLEKLDLRSNVISTVQPGAFLGLGELRRLDLSNNRIGCLT 148
Query: 165 VDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRY 224
+ FQGL L L ++ N + L GVF EL L+ + CDCHL WL W + +
Sbjct: 149 SETFQGLPRLLRLNISGNIFSSLQPGVFDELPALKVVDFGTEFLTCDCHLRWLLPWAQNH 208
Query: 225 P-RLGLYTKCFAPSHIKGQNILDIPEHEFKCSGS 257
+L +T C P + Q + + E + +C G+
Sbjct: 209 SLQLSEHTLCAYPRALHAQALGSLQEAQLRCEGA 242
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFAPS 63
++ N + L GVF EL L+ + CDCHL WL W + + +L +T C P
Sbjct: 163 ISGNIFSSLQPGVFDELPALKVVDFGTEFLTCDCHLRWLLPWAQNHSLQLSEHTLCAYPR 222
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ Q + + E + +C G +E
Sbjct: 223 ALHAQALGSLQEAQLRCEGALE 244
>gi|355687689|gb|EHH26273.1| hypothetical protein EGK_16194 [Macaca mulatta]
Length = 733
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 83 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPK 142
P E T EC S P C C +DC E L VP + T + L+ N I +LPP
Sbjct: 63 PFEAETPECLVS-SVPVQCLCQGLELDCDETNLRAVPSV-SSNVTAMSLQWNLIRKLPPD 120
Query: 143 AFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLR 202
F NY L+++ L N+I+ +++ AF+GL SLT L L++N +T+L GVF +L RL L
Sbjct: 121 CFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLI 180
Query: 203 ISEN 206
I +N
Sbjct: 181 IEDN 184
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 47/125 (37%), Gaps = 32/125 (25%)
Query: 281 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL 340
P E T EC S P C C +DC E L V P ++ +T M
Sbjct: 63 PFEAETPECLVS-SVPVQCLCQGLELDCDETNLRAV----PSVSSNVTAM---------- 107
Query: 341 LYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYK 400
L+ N I +LPP F NY L+++ L+ N IT + AF
Sbjct: 108 -----------------SLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLN 150
Query: 401 RLRRM 405
L ++
Sbjct: 151 SLTKL 155
Score = 37.7 bits (86), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 81/202 (40%), Gaps = 35/202 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N +T+L GVF +L RL L I +N HLS + +P
Sbjct: 157 LSHNRITFLKPGVFEDLHRLEWLIIEDN------HLSRI-----------------SPPT 193
Query: 65 IKGQN--ILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCRE-KGLNKVPIL 121
G N IL + + P +P C H R ++ L + +
Sbjct: 194 FYGLNSLILLVLMNNVLTRLP---------DKPLCQHMPRLHWLDLEGNHIHNLRNLTFI 244
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
T L + +N I L FA ++L +DL N+I + F+ LK L+ L L+
Sbjct: 245 SCSNLTVLVMRKNKINYLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSY 304
Query: 182 NNLTYLPDGVFAELFRLRTLRI 203
N + + F L +L++L +
Sbjct: 305 NPIQKIQANQFDYLVKLKSLSL 326
>gi|297293601|ref|XP_002804288.1| PREDICTED: relaxin receptor 1 [Macaca mulatta]
Length = 652
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 83 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPK 142
P E T EC S P C C +DC E L VP + T + L+ N I +LPP
Sbjct: 6 PFEAETPECLVS-SVPVQCLCQGLELDCDETNLRAVPSV-SSNVTAMSLQWNLIRKLPPD 63
Query: 143 AFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLR 202
F NY L+++ L N+I+ +++ AF+GL SLT L L++N +T+L GVF +L RL L
Sbjct: 64 CFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLI 123
Query: 203 ISEN 206
I +N
Sbjct: 124 IEDN 127
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 47/125 (37%), Gaps = 32/125 (25%)
Query: 281 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL 340
P E T EC S P C C +DC E L V P ++ +T M
Sbjct: 6 PFEAETPECLVS-SVPVQCLCQGLELDCDETNLRAV----PSVSSNVTAM---------- 50
Query: 341 LYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYK 400
L+ N I +LPP F NY L+++ L+ N IT + AF
Sbjct: 51 -----------------SLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLN 93
Query: 401 RLRRM 405
L ++
Sbjct: 94 SLTKL 98
>gi|109076032|ref|XP_001096574.1| PREDICTED: relaxin receptor 1 isoform 3 [Macaca mulatta]
gi|355749642|gb|EHH54041.1| hypothetical protein EGM_14778 [Macaca fascicularis]
Length = 779
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 83 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPK 142
P E T EC S P C C +DC E L VP + T + L+ N I +LPP
Sbjct: 109 PFEAETPECLVS-SVPVQCLCQGLELDCDETNLRAVPSV-SSNVTAMSLQWNLIRKLPPD 166
Query: 143 AFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLR 202
F NY L+++ L N+I+ +++ AF+GL SLT L L++N +T+L GVF +L RL L
Sbjct: 167 CFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLI 226
Query: 203 ISEN 206
I +N
Sbjct: 227 IEDN 230
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 47/125 (37%), Gaps = 32/125 (25%)
Query: 281 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL 340
P E T EC S P C C +DC E L V P ++ +T M
Sbjct: 109 PFEAETPECLVS-SVPVQCLCQGLELDCDETNLRAV----PSVSSNVTAM---------- 153
Query: 341 LYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYK 400
L+ N I +LPP F NY L+++ L+ N IT + AF
Sbjct: 154 -----------------SLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLN 196
Query: 401 RLRRM 405
L ++
Sbjct: 197 SLTKL 201
Score = 38.1 bits (87), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 81/202 (40%), Gaps = 35/202 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N +T+L GVF +L RL L I +N HLS + +P
Sbjct: 203 LSHNRITFLKPGVFEDLHRLEWLIIEDN------HLSRI-----------------SPPT 239
Query: 65 IKGQN--ILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCRE-KGLNKVPIL 121
G N IL + + P +P C H R ++ L + +
Sbjct: 240 FYGLNSLILLVLMNNVLTRLP---------DKPLCQHMPRLHWLDLEGNHIHNLRNLTFI 290
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
T L + +N I L FA ++L +DL N+I + F+ LK L+ L L+
Sbjct: 291 SCSNLTVLVMRKNKINYLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSY 350
Query: 182 NNLTYLPDGVFAELFRLRTLRI 203
N + + F L +L++L +
Sbjct: 351 NPIQKIQANQFDYLVKLKSLSL 372
>gi|70955636|gb|AAZ16379.1| variable lymphocyte receptor B [Eptatretus stoutii]
Length = 259
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 79/171 (46%), Gaps = 13/171 (7%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C+ K L VP +P +TT L+L N + LP F +L+ + L
Sbjct: 23 ACPSRCSCSGTTVSCQSKSLTSVPSGIPSSTTNLQLHVNKLQSLPSGVFDKLTQLKELRL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
NQ+ + F L LT L L +N L +P GVF L L+ + + N + C C +
Sbjct: 83 YNNQLQSLPSGVFDKLTQLTILYLGSNQLKSVPSGVFDRLTSLQNIWLYSNPWDCTCPGI 142
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKI 265
+L +W+ ++ S I Q+ + KCSGS RS I
Sbjct: 143 RYLSQWINKH------------SGIIIQSGGSVNPDSAKCSGSGKPVRSII 181
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 48/113 (42%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V C+ K L VP +P +TT L V+K L S S F + T
Sbjct: 23 ACPSRCSCSGTTVSCQSKSLTSVPSGIPSSTTNLQL-----HVNK--LQSLPSGVFDKLT 75
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ RL N + LP F +L + L N + +P F L+ +
Sbjct: 76 QLKELRLYNNQLQSLPSGVFDKLTQLTILYLGSNQLKSVPSGVFDRLTSLQNI 128
>gi|387539424|gb|AFJ70339.1| relaxin receptor 1 [Macaca mulatta]
Length = 757
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 83 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPK 142
P E T EC S P C C +DC E L VP + T + L+ N I +LPP
Sbjct: 87 PFEAETPECLVS-SVPVQCLCQGLELDCDETNLRAVPSV-SSNVTAMSLQWNLIRKLPPD 144
Query: 143 AFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLR 202
F NY L+++ L N+I+ +++ AF+GL SLT L L++N +T+L GVF +L RL L
Sbjct: 145 CFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLI 204
Query: 203 ISEN 206
I +N
Sbjct: 205 IEDN 208
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 47/125 (37%), Gaps = 32/125 (25%)
Query: 281 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL 340
P E T EC S P C C +DC E L V P ++ +T M
Sbjct: 87 PFEAETPECLVS-SVPVQCLCQGLELDCDETNLRAV----PSVSSNVTAM---------- 131
Query: 341 LYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYK 400
L+ N I +LPP F NY L+++ L+ N IT + AF
Sbjct: 132 -----------------SLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLN 174
Query: 401 RLRRM 405
L ++
Sbjct: 175 SLTKL 179
Score = 38.1 bits (87), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 81/202 (40%), Gaps = 35/202 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N +T+L GVF +L RL L I +N HLS + +P
Sbjct: 181 LSHNRITFLKPGVFEDLHRLEWLIIEDN------HLSRI-----------------SPPT 217
Query: 65 IKGQN--ILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCRE-KGLNKVPIL 121
G N IL + + P +P C H R ++ L + +
Sbjct: 218 FYGLNSLILLVLMNNVLTRLP---------DKPLCQHMPRLHWLDLEGNHIHNLRNLTFI 268
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
T L + +N I L FA ++L +DL N+I + F+ LK L+ L L+
Sbjct: 269 SCSNLTVLVMRKNKINYLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSY 328
Query: 182 NNLTYLPDGVFAELFRLRTLRI 203
N + + F L +L++L +
Sbjct: 329 NPIQKIQANQFDYLVKLKSLSL 350
>gi|326926377|ref|XP_003209378.1| PREDICTED: immunoglobulin superfamily containing leucine-rich
repeat protein 2-like [Meleagris gallopavo]
Length = 699
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 87/221 (39%), Gaps = 59/221 (26%)
Query: 96 SCPHPCRCAD----GIVDCREKGLNKVPILLPEATTELRLEQNDITELP----------- 140
+CP PC C D DC K L VP LP T L L N IT L
Sbjct: 18 ACPEPCACVDKYAHQFADCAYKDLQVVPTGLPSNVTTLSLSANKITALQRRSFLEVTQVT 77
Query: 141 -------------PKAFANYKRLRRIDLSKNQI------------------------SKV 163
P AFA +L+ +D+S NQI + V
Sbjct: 78 SLWLAHNEIRTIEPGAFAILVQLKNLDISHNQIVDFPWQDLYNLSALQLLKMNNNHMAAV 137
Query: 164 AVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK- 222
AF LK L SL +NNN T L +G+F L L L+I N F C C L WL +W+
Sbjct: 138 PQGAFHTLKDLRSLRINNNKFTTLAEGIFDSLSSLSHLQIYNNPFECSCKLQWLKKWMDS 197
Query: 223 ---RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSME 260
P T C P ++G + IP+ + C+ S++
Sbjct: 198 TLISIPEKESIT-CSLPEQLRGMPVGKIPDAQ--CTSPSVQ 235
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK----RYPRLGLYTKCF 60
+NNN T L +G+F L L L+I N F C C L WL +W+ P T C
Sbjct: 153 INNNKFTTLAEGIFDSLSSLSHLQIYNNPFECSCKLQWLKKWMDSTLISIPEKESIT-CS 211
Query: 61 APSHIKGQNILDIPEHEFKCSGP 83
P ++G + IP+ + C+ P
Sbjct: 212 LPEQLRGMPVGKIPDAQ--CTSP 232
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 14/118 (11%)
Query: 294 SCPHPCRCAD----GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSY--ISN 347
+CP PC C D DC K L VP LP T L+ +S +++ + S+ ++
Sbjct: 18 ACPEPCACVDKYAHQFADCAYKDLQVVPTGLPSNVTTLS--LSANKITALQRRSFLEVTQ 75
Query: 348 NFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
W L N+I + P AFA +L+ + + N I + P + N L+ +
Sbjct: 76 VTSLW------LAHNEIRTIEPGAFAILVQLKNLDISHNQIVDFPWQDLYNLSALQLL 127
>gi|119928676|dbj|BAF43159.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 169
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 13/169 (7%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C + V C E+ L VP +P L L +N IT+L P F + L + L
Sbjct: 11 ACPAQCSCPETDVQCHERSLGSVPAGIPTTALRLYLYRNQITKLEPGVFDSLTALTYLHL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ++ + V F L LT L L+ N L +PDG FA L L + + N + C C +
Sbjct: 71 GANQLTALPVGVFDKLTQLTRLGLHINQLKSIPDGAFARLSSLTHVWLHTNPWDCACSDI 130
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L RW+ ++P + N + + +CSG++ R+
Sbjct: 131 LYLSRWISQHPG------------VVRNNYDGVDPDQARCSGTNTPVRA 167
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTEL-TYMVSIDRVDKVLLYSYISNNFKRW 352
+CP C C + V C E+ L VP +P L Y I +++ + S + +
Sbjct: 11 ACPAQCSCPETDVQCHERSLGSVPAGIPTTALRLYLYRNQITKLEPGVFDSLTALTY--- 67
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N +T LP F +L R+ L N + +P AFA L +
Sbjct: 68 ----LHLGANQLTALPVGVFDKLTQLTRLGLHINQLKSIPDGAFARLSSLTHV 116
>gi|260806129|ref|XP_002597937.1| hypothetical protein BRAFLDRAFT_79821 [Branchiostoma floridae]
gi|229283207|gb|EEN53949.1| hypothetical protein BRAFLDRAFT_79821 [Branchiostoma floridae]
Length = 411
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 69/130 (53%), Gaps = 1/130 (0%)
Query: 93 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRR 152
A +CP CRCA V C L VP +P TT L L N++T L + ++ LRR
Sbjct: 25 AAVTCPASCRCAGTHVTCHSH-LTHVPADVPVQTTWLDLSHNNLTSLDGRTLSHLVHLRR 83
Query: 153 IDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC 212
++L N + VA D F L +L S+ L N L +L V L +R++ +S N + CDC
Sbjct: 84 LNLYGNSVRSVADDTFTNLTNLQSVNLGYNRLAHLNPEVVTALRNVRSVYLSGNPWRCDC 143
Query: 213 HLSWLHRWLK 222
HL+ L WL+
Sbjct: 144 HLAHLITWLR 153
>gi|70955620|gb|AAZ16371.1| variable lymphocyte receptor B [Eptatretus stoutii]
Length = 251
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 1/129 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C+ K L VP +P +TT L L N + LP F +L ++ L
Sbjct: 23 ACPSRCSCSGTTVNCQSKSLTSVPSGIPSSTTILYLGSNQLQSLPNGVFDKLTKLTKLWL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
NQ+ + + +F L LT L L +N L +PDG+F L L+ + + N + C C +
Sbjct: 83 DSNQLQSLPMGSFDKLTKLTQLELYSNQLKSVPDGIFDRLTSLQYIYLHTNPWDCSCPRI 142
Query: 215 SWLHRWLKR 223
+L RWL +
Sbjct: 143 DYLSRWLNK 151
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C+ K L VP +P +TT L Y+ S L S + F + T
Sbjct: 23 ACPSRCSCSGTTVNCQSKSLTSVPSGIPSSTTIL-YLGSNQ------LQSLPNGVFDKLT 75
Query: 354 NRSRR-LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ L+ N + LP +F +L ++ L N + +P F L+ +
Sbjct: 76 KLTKLWLDSNQLQSLPMGSFDKLTKLTQLELYSNQLKSVPDGIFDRLTSLQYI 128
>gi|359279872|ref|NP_001240658.1| relaxin receptor 1 isoform 4 [Homo sapiens]
gi|62529841|gb|AAX85197.1| LGR7.2 [Homo sapiens]
Length = 709
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 83 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPK 142
P E T EC S P C C +DC E L VP + T + L+ N I +LPP
Sbjct: 87 PFEAETPECLVG-SVPVQCLCQGLELDCDETNLRAVPSV-SSNVTAMSLQWNLIRKLPPD 144
Query: 143 AFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLR 202
F NY L+++ L N+I+ +++ AF+GL SLT L L++N +T+L GVF +L RL L
Sbjct: 145 CFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLI 204
Query: 203 ISEN 206
I +N
Sbjct: 205 IEDN 208
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 47/125 (37%), Gaps = 32/125 (25%)
Query: 281 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL 340
P E T EC S P C C +DC E L V P ++ +T M
Sbjct: 87 PFEAETPECLVG-SVPVQCLCQGLELDCDETNLRAV----PSVSSNVTAM---------- 131
Query: 341 LYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYK 400
L+ N I +LPP F NY L+++ L+ N IT + AF
Sbjct: 132 -----------------SLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLN 174
Query: 401 RLRRM 405
L ++
Sbjct: 175 SLTKL 179
>gi|402873354|ref|XP_003900543.1| PREDICTED: slit homolog 3 protein-like [Papio anubis]
Length = 852
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 69/130 (53%)
Query: 127 TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTY 186
T + L N I+ L F+N L + LS N++ + + AF GL+SL LTL+ N+++
Sbjct: 107 TLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCIPIHAFNGLRSLRVLTLHGNDISS 166
Query: 187 LPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILD 246
+P+G F +L L L + N CDC L WL W+K + +C +P + + +L
Sbjct: 167 VPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSSPEPMADRLLLT 226
Query: 247 IPEHEFKCSG 256
P H F+C G
Sbjct: 227 TPTHRFQCKG 236
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TL+ N+++ +P+G F +L L L + N CDC L WL W+K + +C +P
Sbjct: 158 TLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSSPE 217
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ + +L P H F+C GPV+
Sbjct: 218 PMADRLLLTTPTHRFQCKGPVD 239
>gi|397503980|ref|XP_003822589.1| PREDICTED: relaxin receptor 1 isoform 2 [Pan paniscus]
Length = 731
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 83 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPK 142
P E T EC S P C C +DC E L VP + T + L+ N I +LPP
Sbjct: 109 PFEAETPECLVG-SVPVQCLCQGLELDCDETNLRAVPSV-SSNVTAMSLQWNLIRKLPPD 166
Query: 143 AFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLR 202
F NY L+++ L N+I+ +++ AF+GL SLT L L++N +T+L GVF +L RL L
Sbjct: 167 CFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLI 226
Query: 203 ISEN 206
I +N
Sbjct: 227 IEDN 230
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 47/125 (37%), Gaps = 32/125 (25%)
Query: 281 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL 340
P E T EC S P C C +DC E L V P ++ +T M
Sbjct: 109 PFEAETPECLVG-SVPVQCLCQGLELDCDETNLRAV----PSVSSNVTAM---------- 153
Query: 341 LYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYK 400
L+ N I +LPP F NY L+++ L+ N IT + AF
Sbjct: 154 -----------------SLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLN 196
Query: 401 RLRRM 405
L ++
Sbjct: 197 SLTKL 201
>gi|402870738|ref|XP_003899361.1| PREDICTED: relaxin receptor 1 isoform 2 [Papio anubis]
Length = 731
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 83 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPK 142
P E T EC S P C C +DC E L VP + T + L+ N I +LPP
Sbjct: 109 PFEAETPECLVG-SVPVQCLCQGLELDCDETNLRAVPSV-SSNVTAMSLQWNLIRKLPPD 166
Query: 143 AFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLR 202
F NY L+++ L N+I+ +++ AF+GL SLT L L++N +T+L GVF +L RL L
Sbjct: 167 CFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLI 226
Query: 203 ISEN 206
I +N
Sbjct: 227 IEDN 230
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 47/125 (37%), Gaps = 32/125 (25%)
Query: 281 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL 340
P E T EC S P C C +DC E L V P ++ +T M
Sbjct: 109 PFEAETPECLVG-SVPVQCLCQGLELDCDETNLRAV----PSVSSNVTAM---------- 153
Query: 341 LYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYK 400
L+ N I +LPP F NY L+++ L+ N IT + AF
Sbjct: 154 -----------------SLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLN 196
Query: 401 RLRRM 405
L ++
Sbjct: 197 SLTKL 201
>gi|10441730|gb|AAG17167.1| leucine-rich repeat-containing G protein-coupled receptor 7 [Homo
sapiens]
Length = 757
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 83 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPK 142
P E T EC S P C C +DC E L VP + T + L+ N I +LPP
Sbjct: 87 PFEAETPECLVG-SVPVQCLCQGLELDCDETNLRAVPSV-SSNVTAMSLQWNLIRKLPPD 144
Query: 143 AFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLR 202
F NY L+++ L N+I+ +++ AF+GL SLT L L++N +T+L GVF +L RL L
Sbjct: 145 CFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLI 204
Query: 203 ISEN 206
I +N
Sbjct: 205 IEDN 208
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 47/125 (37%), Gaps = 32/125 (25%)
Query: 281 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL 340
P E T EC S P C C +DC E L V P ++ +T M
Sbjct: 87 PFEAETPECLVG-SVPVQCLCQGLELDCDETNLRAV----PSVSSNVTAM---------- 131
Query: 341 LYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYK 400
L+ N I +LPP F NY L+++ L+ N IT + AF
Sbjct: 132 -----------------SLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLN 174
Query: 401 RLRRM 405
L ++
Sbjct: 175 SLTKL 179
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 81/202 (40%), Gaps = 35/202 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N +T+L GVF +L RL L I +N HLS + +P
Sbjct: 181 LSHNRITFLKPGVFEDLHRLEWLIIEDN------HLSRI-----------------SPPT 217
Query: 65 IKGQN--ILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCRE-KGLNKVPIL 121
G N IL + + P +P C H R ++ L + +
Sbjct: 218 FYGLNSLILLVLMNNVLTRLP---------DKPLCQHMPRLHWLDLEGNHIHNLRNLTFI 268
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
T L + +N I L FA ++L +DL N+I + F+ LK L+ L L+
Sbjct: 269 SCSNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSY 328
Query: 182 NNLTYLPDGVFAELFRLRTLRI 203
N + + F L +L++L +
Sbjct: 329 NPIQKIQANQFDYLVKLKSLSL 350
>gi|410331343|gb|JAA34618.1| relaxin/insulin-like family peptide receptor 1 [Pan troglodytes]
Length = 779
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 83 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPK 142
P E T EC S P C C +DC E L VP + T + L+ N I +LPP
Sbjct: 109 PFEAETPECLVG-SVPVQCLCQGLELDCDETNLRAVPSV-SSNVTAMSLQWNLIRKLPPD 166
Query: 143 AFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLR 202
F NY L+++ L N+I+ +++ AF+GL SLT L L++N +T+L GVF +L RL L
Sbjct: 167 CFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLI 226
Query: 203 ISEN 206
I +N
Sbjct: 227 IEDN 230
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 47/125 (37%), Gaps = 32/125 (25%)
Query: 281 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL 340
P E T EC S P C C +DC E L V P ++ +T M
Sbjct: 109 PFEAETPECLVG-SVPVQCLCQGLELDCDETNLRAV----PSVSSNVTAM---------- 153
Query: 341 LYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYK 400
L+ N I +LPP F NY L+++ L+ N IT + AF
Sbjct: 154 -----------------SLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLN 196
Query: 401 RLRRM 405
L ++
Sbjct: 197 SLTKL 201
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 81/202 (40%), Gaps = 35/202 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N +T+L GVF +L RL L I +N HLS + +P
Sbjct: 203 LSHNRITFLKPGVFEDLHRLEWLIIEDN------HLSRI-----------------SPPT 239
Query: 65 IKGQN--ILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCRE-KGLNKVPIL 121
G N IL + + P +P C H R ++ L + +
Sbjct: 240 FYGLNSLILLVLMNNVLTRLP---------DKPLCQHMPRLHWLDLEGNHIHNLRNLTFI 290
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
T L + +N I L FA ++L +DL N+I + F+ LK L+ L L+
Sbjct: 291 SCSNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSY 350
Query: 182 NNLTYLPDGVFAELFRLRTLRI 203
N + + F L +L++L +
Sbjct: 351 NPIQKIQANQFDYLVKLKSLSL 372
>gi|85986601|ref|NP_067647.2| relaxin receptor 1 isoform 1 [Homo sapiens]
gi|166209887|sp|Q9HBX9.2|RXFP1_HUMAN RecName: Full=Relaxin receptor 1; AltName: Full=Leucine-rich
repeat-containing G-protein coupled receptor 7; AltName:
Full=Relaxin family peptide receptor 1
gi|85567577|gb|AAI12143.1| Leucine-rich repeat-containing G protein-coupled receptor 7 [Homo
sapiens]
gi|109731341|gb|AAI13618.1| Relaxin/insulin-like family peptide receptor 1 [Homo sapiens]
gi|119625261|gb|EAX04856.1| relaxin family peptide receptor 1, isoform CRA_a [Homo sapiens]
gi|313883528|gb|ADR83250.1| relaxin/insulin-like family peptide receptor 1 (RXFP1) [synthetic
construct]
Length = 757
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 83 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPK 142
P E T EC S P C C +DC E L VP + T + L+ N I +LPP
Sbjct: 87 PFEAETPECLVG-SVPVQCLCQGLELDCDETNLRAVPSV-SSNVTAMSLQWNLIRKLPPD 144
Query: 143 AFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLR 202
F NY L+++ L N+I+ +++ AF+GL SLT L L++N +T+L GVF +L RL L
Sbjct: 145 CFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLI 204
Query: 203 ISEN 206
I +N
Sbjct: 205 IEDN 208
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 47/125 (37%), Gaps = 32/125 (25%)
Query: 281 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL 340
P E T EC S P C C +DC E L V P ++ +T M
Sbjct: 87 PFEAETPECLVG-SVPVQCLCQGLELDCDETNLRAV----PSVSSNVTAM---------- 131
Query: 341 LYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYK 400
L+ N I +LPP F NY L+++ L+ N IT + AF
Sbjct: 132 -----------------SLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLN 174
Query: 401 RLRRM 405
L ++
Sbjct: 175 SLTKL 179
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 81/202 (40%), Gaps = 35/202 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N +T+L GVF +L RL L I +N HLS + +P
Sbjct: 181 LSHNRITFLKPGVFEDLHRLEWLIIEDN------HLSRI-----------------SPPT 217
Query: 65 IKGQN--ILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCRE-KGLNKVPIL 121
G N IL + + P +P C H R ++ L + +
Sbjct: 218 FYGLNSLILLVLMNNVLTRLP---------DKPLCQHMPRLHWLDLEGNHIHNLRNLTFI 268
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
T L + +N I L FA ++L +DL N+I + F+ LK L+ L L+
Sbjct: 269 SCSNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSY 328
Query: 182 NNLTYLPDGVFAELFRLRTLRI 203
N + + F L +L++L +
Sbjct: 329 NPIQKIQANQFDYLVKLKSLSL 350
>gi|344240198|gb|EGV96301.1| Slit-like 3 protein [Cricetulus griseus]
Length = 751
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 67/126 (53%)
Query: 131 LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDG 190
L N I+ L F+N L + LS N++ + V AF GL+SL LTL+ N+++ +P+G
Sbjct: 25 LSNNSISMLTNYTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEG 84
Query: 191 VFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEH 250
F +L L L + N CDC L WL W+K + +C +P + + +L P H
Sbjct: 85 SFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKDGYKEPGIARCSSPESLADRLLLTTPTH 144
Query: 251 EFKCSG 256
F+C G
Sbjct: 145 RFQCKG 150
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TL+ N+++ +P+G F +L L L + N CDC L WL W+K + +C +P
Sbjct: 72 TLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKDGYKEPGIARCSSPE 131
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ + +L P H F+C GPV+
Sbjct: 132 SLADRLLLTTPTHRFQCKGPVD 153
>gi|410305792|gb|JAA31496.1| relaxin/insulin-like family peptide receptor 1 [Pan troglodytes]
Length = 757
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 83 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPK 142
P E T EC S P C C +DC E L VP + T + L+ N I +LPP
Sbjct: 87 PFEAETPECLVG-SVPVQCLCQGLELDCDETNLRAVPSV-SSNVTAMSLQWNLIRKLPPD 144
Query: 143 AFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLR 202
F NY L+++ L N+I+ +++ AF+GL SLT L L++N +T+L GVF +L RL L
Sbjct: 145 CFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLI 204
Query: 203 ISEN 206
I +N
Sbjct: 205 IEDN 208
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 47/125 (37%), Gaps = 32/125 (25%)
Query: 281 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL 340
P E T EC S P C C +DC E L V P ++ +T M
Sbjct: 87 PFEAETPECLVG-SVPVQCLCQGLELDCDETNLRAV----PSVSSNVTAM---------- 131
Query: 341 LYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYK 400
L+ N I +LPP F NY L+++ L+ N IT + AF
Sbjct: 132 -----------------SLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLN 174
Query: 401 RLRRM 405
L ++
Sbjct: 175 SLTKL 179
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 81/202 (40%), Gaps = 35/202 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N +T+L GVF +L RL L I +N HLS + +P
Sbjct: 181 LSHNRITFLKPGVFEDLHRLEWLIIEDN------HLSRI-----------------SPPT 217
Query: 65 IKGQN--ILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCRE-KGLNKVPIL 121
G N IL + + P +P C H R ++ L + +
Sbjct: 218 FYGLNSLILLVLMNNVLTRLP---------DKPLCQHMPRLHWLDLEGNHIHNLRNLTFI 268
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
T L + +N I L FA ++L +DL N+I + F+ LK L+ L L+
Sbjct: 269 SCSNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSY 328
Query: 182 NNLTYLPDGVFAELFRLRTLRI 203
N + + F L +L++L +
Sbjct: 329 NPIQKIQANQFDYLVKLKSLSL 350
>gi|410038876|ref|XP_003950502.1| PREDICTED: relaxin receptor 1 [Pan troglodytes]
Length = 731
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 83 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPK 142
P E T EC S P C C +DC E L VP + T + L+ N I +LPP
Sbjct: 109 PFEAETPECLVG-SVPVQCLCQGLELDCDETNLRAVPSV-SSNVTAMSLQWNLIRKLPPD 166
Query: 143 AFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLR 202
F NY L+++ L N+I+ +++ AF+GL SLT L L++N +T+L GVF +L RL L
Sbjct: 167 CFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLI 226
Query: 203 ISEN 206
I +N
Sbjct: 227 IEDN 230
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 47/125 (37%), Gaps = 32/125 (25%)
Query: 281 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL 340
P E T EC S P C C +DC E L V P ++ +T M
Sbjct: 109 PFEAETPECLVG-SVPVQCLCQGLELDCDETNLRAV----PSVSSNVTAM---------- 153
Query: 341 LYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYK 400
L+ N I +LPP F NY L+++ L+ N IT + AF
Sbjct: 154 -----------------SLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLN 196
Query: 401 RLRRM 405
L ++
Sbjct: 197 SLTKL 201
>gi|119928557|dbj|BAF43104.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 169
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC K L VP +P T L L N IT+L P F + L+++ L
Sbjct: 11 ACPARCSCSGTTVDCERKSLASVPAGIPTTTRRLWLNSNQITKLEPGVFDSLVNLQQLSL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ++ + V F L ++SL+L+ N L +P G F L L + + N + C C +
Sbjct: 71 ESNQLTSLPVGVFYKLTQVSSLSLHTNQLKSIPRGAFDNLKSLTHIFLYNNPWNCACSDI 130
Query: 215 SWLHRWLKRYPRL 227
+L RW+ ++P +
Sbjct: 131 LYLSRWISQHPGV 143
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS--IDRVDKVLLYSYISNNFKR 351
+CP C C+ VDC K L VP +P T L ++ S I +++ + S + N ++
Sbjct: 11 ACPARCSCSGTTVDCERKSLASVPAGIPTTTRRL-WLNSNQITKLEPGVFDSLV--NLQQ 67
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ LE N +T LP F ++ + L N + +P AF N K L +
Sbjct: 68 LS-----LESNQLTSLPVGVFYKLTQVSSLSLHTNQLKSIPRGAFDNLKSLTHI 116
>gi|397503978|ref|XP_003822588.1| PREDICTED: relaxin receptor 1 isoform 1 [Pan paniscus]
Length = 779
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 83 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPK 142
P E T EC S P C C +DC E L VP + T + L+ N I +LPP
Sbjct: 109 PFEAETPECLVG-SVPVQCLCQGLELDCDETNLRAVPSV-SSNVTAMSLQWNLIRKLPPD 166
Query: 143 AFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLR 202
F NY L+++ L N+I+ +++ AF+GL SLT L L++N +T+L GVF +L RL L
Sbjct: 167 CFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLI 226
Query: 203 ISEN 206
I +N
Sbjct: 227 IEDN 230
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 47/125 (37%), Gaps = 32/125 (25%)
Query: 281 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL 340
P E T EC S P C C +DC E L V P ++ +T M
Sbjct: 109 PFEAETPECLVG-SVPVQCLCQGLELDCDETNLRAV----PSVSSNVTAM---------- 153
Query: 341 LYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYK 400
L+ N I +LPP F NY L+++ L+ N IT + AF
Sbjct: 154 -----------------SLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLN 196
Query: 401 RLRRM 405
L ++
Sbjct: 197 SLTKL 201
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 81/202 (40%), Gaps = 35/202 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N +T+L GVF +L RL L I +N HLS + +P
Sbjct: 203 LSHNRITFLKPGVFEDLHRLEWLIIEDN------HLSRI-----------------SPPT 239
Query: 65 IKGQN--ILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCRE-KGLNKVPIL 121
G N IL + + P +P C H R ++ L + +
Sbjct: 240 FYGLNSLILLVLMNNVLTRLP---------DKPLCQHMPRLHWLDLEGNHIHNLRNLTFI 290
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
T L + +N I L FA ++L +DL N+I + F+ LK L+ L L+
Sbjct: 291 SCSNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSY 350
Query: 182 NNLTYLPDGVFAELFRLRTLRI 203
N + + F L +L++L +
Sbjct: 351 NPIQKIQANQFDYLVKLKSLSL 372
>gi|194379082|dbj|BAG58092.1| unnamed protein product [Homo sapiens]
Length = 652
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 83 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPK 142
P E T EC S P C C +DC E L VP + T + L+ N I +LPP
Sbjct: 6 PFEAETPECLVG-SVPVQCLCQGLELDCDETNLRAVPSV-SSNVTAMSLQWNLIRKLPPD 63
Query: 143 AFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLR 202
F NY L+++ L N+I+ +++ AF+GL SLT L L++N +T+L GVF +L RL L
Sbjct: 64 CFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLI 123
Query: 203 ISEN 206
I +N
Sbjct: 124 IEDN 127
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 47/125 (37%), Gaps = 32/125 (25%)
Query: 281 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL 340
P E T EC S P C C +DC E L V P ++ +T M
Sbjct: 6 PFEAETPECLVG-SVPVQCLCQGLELDCDETNLRAV----PSVSSNVTAM---------- 50
Query: 341 LYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYK 400
L+ N I +LPP F NY L+++ L+ N IT + AF
Sbjct: 51 -----------------SLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLN 93
Query: 401 RLRRM 405
L ++
Sbjct: 94 SLTKL 98
>gi|114596588|ref|XP_001144257.1| PREDICTED: relaxin receptor 1 isoform 8 [Pan troglodytes]
Length = 779
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 83 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPK 142
P E T EC S P C C +DC E L VP + T + L+ N I +LPP
Sbjct: 109 PFEAETPECLVG-SVPVQCLCQGLELDCDETNLRAVPSV-SSNVTAMSLQWNLIRKLPPD 166
Query: 143 AFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLR 202
F NY L+++ L N+I+ +++ AF+GL SLT L L++N +T+L GVF +L RL L
Sbjct: 167 CFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLI 226
Query: 203 ISEN 206
I +N
Sbjct: 227 IEDN 230
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 47/125 (37%), Gaps = 32/125 (25%)
Query: 281 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL 340
P E T EC S P C C +DC E L V P ++ +T M
Sbjct: 109 PFEAETPECLVG-SVPVQCLCQGLELDCDETNLRAV----PSVSSNVTAM---------- 153
Query: 341 LYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYK 400
L+ N I +LPP F NY L+++ L+ N IT + AF
Sbjct: 154 -----------------SLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLN 196
Query: 401 RLRRM 405
L ++
Sbjct: 197 SLTKL 201
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 81/202 (40%), Gaps = 35/202 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N +T+L GVF +L RL L I +N HLS + +P
Sbjct: 203 LSHNRITFLKPGVFEDLHRLEWLIIEDN------HLSRI-----------------SPPT 239
Query: 65 IKGQN--ILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCRE-KGLNKVPIL 121
G N IL + + P +P C H R ++ L + +
Sbjct: 240 FYGLNSLILLVLMNNVLTRLP---------DKPLCQHMPRLHWLDLEGNHIHNLRNLTFI 290
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
T L + +N I L FA ++L +DL N+I + F+ LK L+ L L+
Sbjct: 291 SCSNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSY 350
Query: 182 NNLTYLPDGVFAELFRLRTLRI 203
N + + F L +L++L +
Sbjct: 351 NPIQKIQANQFDYLVKLKSLSL 372
>gi|332820497|ref|XP_001143584.2| PREDICTED: relaxin receptor 1 isoform 1 [Pan troglodytes]
Length = 652
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 83 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPK 142
P E T EC S P C C +DC E L VP + T + L+ N I +LPP
Sbjct: 6 PFEAETPECLVG-SVPVQCLCQGLELDCDETNLRAVPSV-SSNVTAMSLQWNLIRKLPPD 63
Query: 143 AFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLR 202
F NY L+++ L N+I+ +++ AF+GL SLT L L++N +T+L GVF +L RL L
Sbjct: 64 CFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLI 123
Query: 203 ISEN 206
I +N
Sbjct: 124 IEDN 127
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 47/125 (37%), Gaps = 32/125 (25%)
Query: 281 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL 340
P E T EC S P C C +DC E L V P ++ +T M
Sbjct: 6 PFEAETPECLVG-SVPVQCLCQGLELDCDETNLRAV----PSVSSNVTAM---------- 50
Query: 341 LYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYK 400
L+ N I +LPP F NY L+++ L+ N IT + AF
Sbjct: 51 -----------------SLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLN 93
Query: 401 RLRRM 405
L ++
Sbjct: 94 SLTKL 98
>gi|410956662|ref|XP_003984958.1| PREDICTED: LOW QUALITY PROTEIN: relaxin receptor 1 [Felis catus]
Length = 758
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 69/122 (56%), Gaps = 2/122 (1%)
Query: 85 EKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAF 144
E T EC S P PC C VDC E L VP + T++ L++N I +LPP F
Sbjct: 89 ETQTSECLVG-SVPVPCLCRGLEVDCDETNLRAVPSV-SSNVTKMSLQRNLIRKLPPDGF 146
Query: 145 ANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRIS 204
Y L+++ L N I +++ AF+GL SLT L L++N +T+L GVF +L RL L I
Sbjct: 147 KKYHHLQKLCLQNNNIRSISIYAFRGLYSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIE 206
Query: 205 EN 206
+N
Sbjct: 207 DN 208
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 10/124 (8%)
Query: 283 EKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLY 342
E T EC S P PC C VDC E L V P ++ +T M + + L+
Sbjct: 89 ETQTSECLVG-SVPVPCLCRGLEVDCDETNLRAV----PSVSSNVTKM----SLQRNLIR 139
Query: 343 SYISNNFKRWTNRSRR-LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKR 401
+ FK++ + + L+ N+I + AF L ++ L N IT L P F + R
Sbjct: 140 KLPPDGFKKYHHLQKLCLQNNNIRSISIYAFRGLYSLTKLYLSHNRITFLKPGVFEDLHR 199
Query: 402 LRRM 405
L +
Sbjct: 200 LEWL 203
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 78/200 (39%), Gaps = 31/200 (15%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N +T+L GVF +L RL L I +N HLS + +P
Sbjct: 181 LSHNRITFLKPGVFEDLHRLEWLIIEDN------HLSRI-----------------SPLT 217
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCRE-KGLNKVPILLP 123
G N L + + +P C H R + L + +
Sbjct: 218 FYGLNSLIL-------LALMNNVLTHLPDKPLCQHMPRLHWLDFEGNHIHNLRNLTFISC 270
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
T L + +N I L FA ++L +DL N+I + F+ LK L+ L L+ N
Sbjct: 271 SNLTVLVMRKNKINHLSENTFAPLQKLDELDLGSNKIENLPPQVFKDLKELSQLNLSYNP 330
Query: 184 LTYLPDGVFAELFRLRTLRI 203
+ + F L +L++L +
Sbjct: 331 IQKIQANQFDYLVKLKSLSL 350
>gi|402870736|ref|XP_003899360.1| PREDICTED: relaxin receptor 1 isoform 1 [Papio anubis]
Length = 779
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 83 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPK 142
P E T EC S P C C +DC E L VP + T + L+ N I +LPP
Sbjct: 109 PFEAETPECLVG-SVPVQCLCQGLELDCDETNLRAVPSV-SSNVTAMSLQWNLIRKLPPD 166
Query: 143 AFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLR 202
F NY L+++ L N+I+ +++ AF+GL SLT L L++N +T+L GVF +L RL L
Sbjct: 167 CFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLI 226
Query: 203 ISEN 206
I +N
Sbjct: 227 IEDN 230
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 47/125 (37%), Gaps = 32/125 (25%)
Query: 281 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL 340
P E T EC S P C C +DC E L V P ++ +T M
Sbjct: 109 PFEAETPECLVG-SVPVQCLCQGLELDCDETNLRAV----PSVSSNVTAM---------- 153
Query: 341 LYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYK 400
L+ N I +LPP F NY L+++ L+ N IT + AF
Sbjct: 154 -----------------SLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLN 196
Query: 401 RLRRM 405
L ++
Sbjct: 197 SLTKL 201
Score = 38.1 bits (87), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 81/202 (40%), Gaps = 35/202 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N +T+L GVF +L RL L I +N HLS + +P
Sbjct: 203 LSHNRITFLKPGVFEDLHRLEWLIIEDN------HLSRI-----------------SPPT 239
Query: 65 IKGQN--ILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCRE-KGLNKVPIL 121
G N IL + + P +P C H R ++ L + +
Sbjct: 240 FYGLNSLILLVLMNNVLTRLP---------DKPLCQHMPRLHWLDLEGNHIHNLRNLTFI 290
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
T L + +N I L FA ++L +DL N+I + F+ LK L+ L L+
Sbjct: 291 SCSNLTVLVMRKNKINYLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSY 350
Query: 182 NNLTYLPDGVFAELFRLRTLRI 203
N + + F L +L++L +
Sbjct: 351 NPIQKIQANQFDYLVKLKSLSL 372
>gi|397503986|ref|XP_003822592.1| PREDICTED: relaxin receptor 1 isoform 5 [Pan paniscus]
Length = 652
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 83 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPK 142
P E T EC S P C C +DC E L VP + T + L+ N I +LPP
Sbjct: 6 PFEAETPECLVG-SVPVQCLCQGLELDCDETNLRAVPSV-SSNVTAMSLQWNLIRKLPPD 63
Query: 143 AFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLR 202
F NY L+++ L N+I+ +++ AF+GL SLT L L++N +T+L GVF +L RL L
Sbjct: 64 CFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLI 123
Query: 203 ISEN 206
I +N
Sbjct: 124 IEDN 127
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 47/125 (37%), Gaps = 32/125 (25%)
Query: 281 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL 340
P E T EC S P C C +DC E L V P ++ +T M
Sbjct: 6 PFEAETPECLVG-SVPVQCLCQGLELDCDETNLRAV----PSVSSNVTAM---------- 50
Query: 341 LYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYK 400
L+ N I +LPP F NY L+++ L+ N IT + AF
Sbjct: 51 -----------------SLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLN 93
Query: 401 RLRRM 405
L ++
Sbjct: 94 SLTKL 98
>gi|410930185|ref|XP_003978479.1| PREDICTED: LOW QUALITY PROTEIN: G-protein coupled receptor 124-like
[Takifugu rubripes]
Length = 1348
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 72/130 (55%), Gaps = 1/130 (0%)
Query: 127 TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTY 186
+L L+ N I+ + P AF +LR++DLS N+I + V+ FQGL +LT L L+ N +
Sbjct: 108 VKLDLKHNLISRIMPGAFLGLSKLRKLDLSNNRIGCLTVNVFQGLTNLTKLNLSGNIIPT 167
Query: 187 LPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAPSHIKGQNIL 245
+ GVF EL L+ + + + CDC L W+ R+ RLG T C P ++G+ +
Sbjct: 168 IDQGVFQELPSLKLVNFNSDFLTCDCSLHWVPRFFHSSSARLGEETLCAFPRSLRGKQLR 227
Query: 246 DIPEHEFKCS 255
+ E++ C
Sbjct: 228 GLKENQLSCG 237
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAPS 63
L+ N + + GVF EL L+ + + + CDC L W+ R+ RLG T C P
Sbjct: 160 LSGNIIPTIDQGVFQELPSLKLVNFNSDFLTCDCSLHWVPRFFHSSSARLGEETLCAFPR 219
Query: 64 HIKGQNILDIPEHEFKCS 81
++G+ + + E++ C
Sbjct: 220 SLRGKQLRGLKENQLSCG 237
>gi|402870742|ref|XP_003899363.1| PREDICTED: relaxin receptor 1 isoform 4 [Papio anubis]
Length = 652
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 83 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPK 142
P E T EC S P C C +DC E L VP + T + L+ N I +LPP
Sbjct: 6 PFEAETPECLVG-SVPVQCLCQGLELDCDETNLRAVPSV-SSNVTAMSLQWNLIRKLPPD 63
Query: 143 AFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLR 202
F NY L+++ L N+I+ +++ AF+GL SLT L L++N +T+L GVF +L RL L
Sbjct: 64 CFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLI 123
Query: 203 ISEN 206
I +N
Sbjct: 124 IEDN 127
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 47/125 (37%), Gaps = 32/125 (25%)
Query: 281 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL 340
P E T EC S P C C +DC E L V P ++ +T M
Sbjct: 6 PFEAETPECLVG-SVPVQCLCQGLELDCDETNLRAV----PSVSSNVTAM---------- 50
Query: 341 LYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYK 400
L+ N I +LPP F NY L+++ L+ N IT + AF
Sbjct: 51 -----------------SLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLN 93
Query: 401 RLRRM 405
L ++
Sbjct: 94 SLTKL 98
>gi|284010938|dbj|BAI66944.1| variable lymphocyte receptor B [Eptatretus burgeri]
Length = 189
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 11/171 (6%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C + VP +P +TT+L LE N + LP F N +L+ + L
Sbjct: 23 ACPSRCSCSGTTVGCSYQSRTSVPSGIPSSTTKLWLESNKLQSLPSGLFDNLSKLKELYL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
NQ+ + F L SLT L L+ N L +P G+F L +L T+ + +N + C+C +
Sbjct: 83 YSNQLQSLPHGVFDKLTSLTYLNLHTNQLKSIPQGMFDNLKKLDTIYLYKNPWDCECPGI 142
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKI 265
+L W+++ + Y N + KCSGS RS I
Sbjct: 143 HYLSEWIRKNSGIVYY----------WTNRKVLQPDSAKCSGSGKPVRSII 183
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V C + VP +P +TT+L + +++ L S + +N +
Sbjct: 23 ACPSRCSCSGTTVGCSYQSRTSVPSGIPSSTTKL--WLESNKLQS--LPSGLFDNLSKL- 77
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
+ L N + LP F L + L N + +P F N K+L
Sbjct: 78 -KELYLYSNQLQSLPHGVFDKLTSLTYLNLHTNQLKSIPQGMFDNLKKL 125
>gi|81175380|gb|ABB59029.1| variable lymphocyte receptor B [Eptatretus stoutii]
Length = 259
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 80/171 (46%), Gaps = 13/171 (7%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C+ + L VP +P +TT L L+ N + LP F +L + L
Sbjct: 23 ACPSRCSCSGTTVSCQSRSLTSVPSGIPSSTTILYLQYNQLKSLPNGVFDKLTQLTTLYL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
++NQ+ + F L LT+L L NN L +PDG+F L L+ + + N + C C +
Sbjct: 83 NQNQLQSLPHGVFDKLTQLTTLGLYNNQLKSVPDGIFDRLTSLQYIYLQSNPWDCTCPGI 142
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKI 265
+ W+ ++ S + N ++ KCSGS RS I
Sbjct: 143 RYFSEWINKH------------SGVIIDNSNNVNPDSAKCSGSGKPVRSII 181
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V C+ + L VP +P +TT L + L S + F + T
Sbjct: 23 ACPSRCSCSGTTVSCQSRSLTSVPSGIPSSTTILYLQYN-------QLKSLPNGVFDKLT 75
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L QN + LP F +L + L N + +P F L+ +
Sbjct: 76 QLTTLYLNQNQLQSLPHGVFDKLTQLTTLGLYNNQLKSVPDGIFDRLTSLQYI 128
>gi|76162245|gb|ABA40196.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 170
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C E+ L VP +P T L L N IT+L P F + L+++ +
Sbjct: 1 ACPSQCSCSGTQVNCHERSLASVPAGIPTTTQVLYLYTNQITKLEPGVFDSLGNLQQLYI 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
S NQ+ + F L LT L+L NN L +P G F L L + + +N + C C +
Sbjct: 61 SWNQLQALPTGVFNKLTQLTHLSLYNNQLKSIPRGAFDNLKSLTHIWLFDNPWDCACSDI 120
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L RW+ ++P + ++ ++ +CSG++ R+
Sbjct: 121 LYLSRWISQHPGV-----------LRNAGSYNVNPDSARCSGTNTPVRA 158
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS--IDRVDKVLLYSYISNNFKR 351
+CP C C+ V+C E+ L VP +P TT++ Y+ + I +++ + S N ++
Sbjct: 1 ACPSQCSCSGTQVNCHERSLASVPAGIP-TTTQVLYLYTNQITKLEPGVFDSL--GNLQQ 57
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ N + LP F +L + L N + +P AF N K L +
Sbjct: 58 -----LYISWNQLQALPTGVFNKLTQLTHLSLYNNQLKSIPRGAFDNLKSLTHI 106
>gi|193784095|dbj|BAG53639.1| unnamed protein product [Homo sapiens]
Length = 768
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 83 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPK 142
P E T EC S P C C +DC E L VP + T + L+ N I +LPP
Sbjct: 98 PFEAETPECLVG-SVPVQCLCQGLELDCDETNLRAVPSV-SSNVTAMSLQWNLIRKLPPD 155
Query: 143 AFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLR 202
F NY L+++ L N+I+ +++ AF+GL SLT L L++N +T+L GVF +L RL L
Sbjct: 156 CFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLI 215
Query: 203 ISEN 206
I +N
Sbjct: 216 IEDN 219
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 47/125 (37%), Gaps = 32/125 (25%)
Query: 281 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL 340
P E T EC S P C C +DC E L V P ++ +T M
Sbjct: 98 PFEAETPECLVG-SVPVQCLCQGLELDCDETNLRAV----PSVSSNVTAM---------- 142
Query: 341 LYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYK 400
L+ N I +LPP F NY L+++ L+ N IT + AF
Sbjct: 143 -----------------SLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLN 185
Query: 401 RLRRM 405
L ++
Sbjct: 186 SLTKL 190
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 81/202 (40%), Gaps = 35/202 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N +T+L GVF +L RL L I +N HLS + +P
Sbjct: 192 LSHNRITFLKPGVFEDLHRLEWLIIEDN------HLSRI-----------------SPPT 228
Query: 65 IKGQN--ILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCRE-KGLNKVPIL 121
G N IL + + P +P C H R ++ L + +
Sbjct: 229 FYGLNSLILLVLMNNVLTRLP---------DKPLCQHMPRLHWLDLEGNHIHNLRNLTFI 279
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
T L + +N I L FA ++L +DL N+I + F+ LK L+ L L+
Sbjct: 280 SCSNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSY 339
Query: 182 NNLTYLPDGVFAELFRLRTLRI 203
N + + F L +L++L +
Sbjct: 340 NPIQKIQANQFDYLVKLKSLSL 361
>gi|119926247|dbj|BAF43171.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 169
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C+ + VP +P T ELRL N IT+L P F + LR + L
Sbjct: 11 ACPAQCSCSGASVECQSRSFASVPAGIPTTTRELRLYTNQITKLEPGVFDSLANLRELHL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ++ + F L LT L+L N LT +P G F L L + + N + C C +
Sbjct: 71 WGNQLASLPPGVFDKLTQLTHLSLGYNQLTTVPKGAFDNLKSLTHIWLYNNPWDCACSDI 130
Query: 215 SWLHRWLKR 223
+L RW+ R
Sbjct: 131 LYLSRWISR 139
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTEL-TYMVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ V+C+ + VP +P T EL Y I +++ + S +
Sbjct: 11 ACPAQCSCSGASVECQSRSFASVPAGIPTTTRELRLYTNQITKLEPGVFDSLAN------ 64
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R L N + LPP F +L + L N +T +P AF N K L +
Sbjct: 65 -LRELHLWGNQLASLPPGVFDKLTQLTHLSLGYNQLTTVPKGAFDNLKSLTHI 116
>gi|113206126|ref|NP_001038132.1| immunoglobulin superfamily containing leucine-rich repeat protein 2
precursor [Gallus gallus]
gi|78771533|dbj|BAE47961.1| LRR and Ig containing transmembrane protein [Gallus gallus]
Length = 699
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 87/221 (39%), Gaps = 59/221 (26%)
Query: 96 SCPHPCRCAD----GIVDCREKGLNKVPILLPEATTELRLEQNDITELP----------- 140
+CP PC C D DC K L VP LP T L L N IT L
Sbjct: 18 ACPEPCACVDKYAHQFADCAYKDLQVVPTGLPSNVTTLSLSANKITALQRRSFVEVTQVT 77
Query: 141 -------------PKAFANYKRLRRIDLSKNQI------------------------SKV 163
P AFA +L+ +D+S NQI + V
Sbjct: 78 SLWLAHNEIRAIEPGAFAILVQLKNLDISHNQIVDFPWQDLYNLSALQLLKMNNNHMAVV 137
Query: 164 AVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK- 222
AF LK L SL +NNN T L +G+F L L L+I N F C C L WL +W+
Sbjct: 138 PQGAFHTLKDLRSLRINNNKFTTLAEGIFDSLSSLSHLQIYNNPFECSCKLQWLKKWMDS 197
Query: 223 ---RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSME 260
P T C P ++G + IP+ + C+ S++
Sbjct: 198 TLISIPEKESIT-CSLPEQLRGVEVGKIPDTQ--CTSPSVQ 235
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK----RYPRLGLYTKCF 60
+NNN T L +G+F L L L+I N F C C L WL +W+ P T C
Sbjct: 153 INNNKFTTLAEGIFDSLSSLSHLQIYNNPFECSCKLQWLKKWMDSTLISIPEKESIT-CS 211
Query: 61 APSHIKGQNILDIPEHEFKCSGP 83
P ++G + IP+ + C+ P
Sbjct: 212 LPEQLRGVEVGKIPDTQ--CTSP 232
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 10/116 (8%)
Query: 294 SCPHPCRCAD----GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNF 349
+CP PC C D DC K L VP LP T L+ +S +++ + S++
Sbjct: 18 ACPEPCACVDKYAHQFADCAYKDLQVVPTGLPSNVTTLS--LSANKITALQRRSFVEVT- 74
Query: 350 KRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
S L N+I + P AFA +L+ + + N I + P + N L+ +
Sbjct: 75 ---QVTSLWLAHNEIRAIEPGAFAILVQLKNLDISHNQIVDFPWQDLYNLSALQLL 127
>gi|50086727|gb|AAT70244.1| variable lymphocyte receptor [Petromyzon marinus]
Length = 156
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDCR K + VP +P L L N IT+L P F +L +DL
Sbjct: 9 ACPSQCSCDQTTVDCRNKRFSSVPAGIPTDRQNLWLNNNQITKLEPGVFDRLTQLTHLDL 68
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
+NQ+ + F L+ LT L L NN LT +P+G F L +L+ + + N + C C +
Sbjct: 69 DRNQLKSLPPGIFDKLEKLTRLELYNNQLTTVPEGAFNSLMKLQYIWLHSNPWDCACSDI 128
Query: 215 SWLHRWLKRY 224
+L WL ++
Sbjct: 129 LYLSGWLGQH 138
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C VDCR K + VP +P T ++ +++ K+ F R T
Sbjct: 9 ACPSQCSCDQTTVDCRNKRFSSVPAGIP--TDRQNLWLNNNQITKL-----EPGVFDRLT 61
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L++N + LPP F ++L R+ L N +T +P AF + +L+ +
Sbjct: 62 QLTHLDLDRNQLKSLPPGIFDKLEKLTRLELYNNQLTTVPEGAFNSLMKLQYI 114
>gi|320169501|gb|EFW46400.1| tyrosine-protein kinase Src42A [Capsaspora owczarzaki ATCC 30864]
Length = 1286
Score = 86.7 bits (213), Expect = 2e-14, Method: Composition-based stats.
Identities = 93/366 (25%), Positives = 143/366 (39%), Gaps = 86/366 (23%)
Query: 101 CRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQI 160
C C+ V+C +K L +P +P TT+L L N IT +P AF L+ + + NQI
Sbjct: 38 CTCSVTTVNCIDKALTAIPSGIPNTTTQLYLNNNQITSIPTSAFPGLTVLQILQVYGNQI 97
Query: 161 SKVAVDAFQGLKSLTSLTLNNNNLT------------------------YLPDGVFAELF 196
+ + DAF GL ++ SL LNNN LT +P G FA L
Sbjct: 98 TYIPADAFTGLTAVISLQLNNNRLTDISANAFTGLSALSQLFLNNNRLSSVPAGAFAGLP 157
Query: 197 RLRTLRISENS--------FICDCHLSWLHRWLKRYPRL--GLYTKCFAPS--HIKGQNI 244
L+ L+++ N F L+WL + + ++T S ++ NI
Sbjct: 158 ALKQLQLNSNRITSISATLFTGLTALTWLRLEFNQITSIPASVFTDLTGLSVLVLRSNNI 217
Query: 245 LDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADG 304
IP + F + + S+I + S P G AA
Sbjct: 218 TSIPPYAF----TGLTALSQI-----DVSINLITSIPAFAFAGLTAAT------------ 256
Query: 305 IVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFK---------RWTNR 355
+D +N++ + A T LT + ++ +D L S +S F W+N+
Sbjct: 257 YLDLY---INQITSISDSAFTGLTALTFLN-MDNNRLTSILSTTFAGLTALQYLYLWSNQ 312
Query: 356 ----------------SRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANY 399
S +L N IT +P AF + L + L N IT +P AFAN
Sbjct: 313 VTSIAPNTFAGLTALNSLQLYDNQITSIPANAFDDLSVLNTLSLNDNLITSVPASAFANL 372
Query: 400 KRLRRM 405
L+ +
Sbjct: 373 TSLQYL 378
Score = 60.1 bits (144), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/79 (40%), Positives = 44/79 (55%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N IT +P AFAN L+ + L N+I+ +A +AF L +L SL L+ N +T +P
Sbjct: 354 LSLNDNLITSVPASAFANLTSLQYLSLFNNRITSIAANAFDDLTALGSLHLHTNRITNIP 413
Query: 189 DGVFAELFRLRTLRISENS 207
FA L L L + NS
Sbjct: 414 STAFASLSALTQLHLYNNS 432
Score = 55.1 bits (131), Expect = 6e-05, Method: Composition-based stats.
Identities = 64/245 (26%), Positives = 96/245 (39%), Gaps = 44/245 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENS--------FICDCHLSWLHRWLKRYPRL--G 54
LNNN L+ +P G FA L L+ L+++ N F L+WL + +
Sbjct: 140 LNNNRLSSVPAGAFAGLPALKQLQLNSNRITSISATLFTGLTALTWLRLEFNQITSIPAS 199
Query: 55 LYTKCFAPSHI--KGQNILDIPEHEFK---------------CSGPVEKPTGECAAEPSC 97
++T S + + NI IP + F S P G AA
Sbjct: 200 VFTDLTGLSVLVLRSNNITSIPPYAFTGLTALSQIDVSINLITSIPAFAFAGLTAATYLD 259
Query: 98 PHPCRCADGIVDCREKGL----------NKVPILLPE------ATTELRLEQNDITELPP 141
+ + I D GL N++ +L A L L N +T + P
Sbjct: 260 LYINQITS-ISDSAFTGLTALTFLNMDNNRLTSILSTTFAGLTALQYLYLWSNQVTSIAP 318
Query: 142 KAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTL 201
FA L + L NQI+ + +AF L L +L+LN+N +T +P FA L L+ L
Sbjct: 319 NTFAGLTALNSLQLYDNQITSIPANAFDDLSVLNTLSLNDNLITSVPASAFANLTSLQYL 378
Query: 202 RISEN 206
+ N
Sbjct: 379 SLFNN 383
Score = 48.5 bits (114), Expect = 0.006, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 37/68 (54%)
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL 184
A T + + N I+ +P F L+ + LS NQI+ V+ +AF GL +LT L+L N +
Sbjct: 446 AVTYMYMYDNQISSIPANTFTGMTSLKLLYLSGNQITSVSANAFSGLTALTQLSLYLNRI 505
Query: 185 TYLPDGVF 192
T + F
Sbjct: 506 TSISAAAF 513
Score = 47.0 bits (110), Expect = 0.016, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 134 NDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLT 185
N I+ +P AF + L+ + L NQI+ +A +AF GL +L++L L+NN +T
Sbjct: 527 NQISSIPSSAFTDLTLLKFLYLYNNQITSIAANAFVGLPALSTLLLHNNTIT 578
Score = 44.7 bits (104), Expect = 0.091, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N IT + AF + L + L N+I+ + AF L +LT L L NN++T +
Sbjct: 378 LSLFNNRITSIAANAFDDLTALGSLHLHTNRITNIPSTAFASLSALTQLHLYNNSITSIS 437
Query: 189 DGVFAELFRLRTLRISEN 206
G F+ L + + + +N
Sbjct: 438 AGTFSSLSAVTYMYMYDN 455
Score = 40.8 bits (94), Expect = 1.2, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 39/83 (46%)
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL 184
A T+L L N IT + AF L + LS NQIS + AF L L L L NN +
Sbjct: 494 ALTQLSLYLNRITSISAAAFPGLTALLTLSLSDNQISSIPSSAFTDLTLLKFLYLYNNQI 553
Query: 185 TYLPDGVFAELFRLRTLRISENS 207
T + F L L TL + N+
Sbjct: 554 TSIAANAFVGLPALSTLLLHNNT 576
Score = 40.4 bits (93), Expect = 1.7, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N IT + AF+ L ++ L N+I+ ++ AF GL +L +L+L++N ++ +P
Sbjct: 474 LYLSGNQITSVSANAFSGLTALTQLSLYLNRITSISAAAFPGLTALLTLSLSDNQISSIP 533
Query: 189 DGVFAELFRLRTLRISEN 206
F +L L+ L + N
Sbjct: 534 SSAFTDLTLLKFLYLYNN 551
>gi|70955599|gb|AAZ16361.1| variable lymphocyte receptor B [Eptatretus burgeri]
Length = 273
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 80/182 (43%), Gaps = 19/182 (10%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ + C KGL VP +P + T L LE N + LP F +L ++ L
Sbjct: 23 ACPSRCSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF------- 208
S+NQI + F L LT L L+ N L LP+GVF +L +L+ L + N
Sbjct: 83 SQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGI 142
Query: 209 ---ICDCHLSWLHR--WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+ WLH W PR+ ++ + K Q KCSGS RS
Sbjct: 143 FDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQG-------SAKCSGSGKPVRS 195
Query: 264 KI 265
I
Sbjct: 196 II 197
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ + C KGL VP +P + T L ++ L S F + T
Sbjct: 23 ACPSRCSCSGTEIRCNSKGLTSVPTGIPSSATRL-------ELESNKLQSLPHGVFDKLT 75
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ L QN I LP F +L + L +N + LP F +L+ +
Sbjct: 76 QLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKEL 128
>gi|119928667|dbj|BAF43155.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 170
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C K L VP +P T L L N IT+L P F + K+L ++L
Sbjct: 11 ACPARCSCSGTDVHCNSKSLASVPAGIPSTTLVLYLNDNQITKLEPGVFDSLKQLTVLNL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
+ NQ++ + V + L LT L L+ N L +P G F L L + + N + C C +
Sbjct: 71 ADNQLTTLPVGVYDKLTKLTHLALHINQLKSIPRGAFDNLKSLTHIWLFGNPWDCACSDI 130
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L RW+ ++P + +K N + +CSG++ R+
Sbjct: 131 LYLSRWISQHPGV-----------VKNPNTGSVDPDSARCSGTNTPVRA 168
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V C K L VP +P +T L ++ +++ K L + ++ K+ T
Sbjct: 11 ACPARCSCSGTDVHCNSKSLASVPAGIP--STTLVLYLNDNQITK--LEPGVFDSLKQLT 66
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N +T LP + +L + L N + +P AF N K L +
Sbjct: 67 --VLNLADNQLTTLPVGVYDKLTKLTHLALHINQLKSIPRGAFDNLKSLTHI 116
>gi|70955630|gb|AAZ16376.1| variable lymphocyte receptor B [Eptatretus stoutii]
Length = 252
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 1/129 (0%)
Query: 94 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRI 153
E +CP C C+ V C KG VP +P +TTEL L N + LP F +L +
Sbjct: 21 EKACPSRCSCSGTTVSCAGKGFTSVPSGIPASTTELHLWGNKLQSLPHGVFDKLTQLTTL 80
Query: 154 DLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC- 212
LS N++ + F L L L L+ N L +PDGVF L L+ + + N + C C
Sbjct: 81 YLSNNKLQSLPSGVFDNLNQLKDLRLHQNQLKSVPDGVFDSLTSLQNIYLYSNPWDCTCP 140
Query: 213 HLSWLHRWL 221
+ +L RWL
Sbjct: 141 GVDYLSRWL 149
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 8/115 (6%)
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
E +CP C C+ V C KG VP +P +TTEL + L S F +
Sbjct: 21 EKACPSRCSCSGTTVSCAGKGFTSVPSGIPASTTEL-------HLWGNKLQSLPHGVFDK 73
Query: 352 WTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
T + L N + LP F N +L+ +RL QN + +P F + L+ +
Sbjct: 74 LTQLTTLYLSNNKLQSLPSGVFDNLNQLKDLRLHQNQLKSVPDGVFDSLTSLQNI 128
>gi|119926281|dbj|BAF43182.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 170
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 67/133 (50%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C+ + L VP +P T L L N IT+L P F L+++ L
Sbjct: 11 ACPARCSCSGTSVNCQGRSLTSVPAGIPTTTLVLYLNDNQITKLEPGVFDRLANLQQLYL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
NQ+S + V F L LT L LN N L +PDG FA L L + + N + C C +
Sbjct: 71 GGNQLSALPVGVFDKLTQLTDLGLNGNQLKSVPDGAFARLSSLTHVWLHTNPWDCQCTDI 130
Query: 215 SWLHRWLKRYPRL 227
+L W ++ +
Sbjct: 131 LYLSGWAAQHSGI 143
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C+ + L VP +P TT L ++ +++ K+ F R
Sbjct: 11 ACPARCSCSGTSVNCQGRSLTSVPAGIP--TTTLVLYLNDNQITKLE-----PGVFDRLA 63
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N + L N ++ LP F +L + L N + +P AFA L +
Sbjct: 64 NLQQLYLGGNQLSALPVGVFDKLTQLTDLGLNGNQLKSVPDGAFARLSSLTHV 116
>gi|449267989|gb|EMC78873.1| Immunoglobulin superfamily containing leucine-rich repeat protein
[Columba livia]
Length = 416
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 74/146 (50%), Gaps = 9/146 (6%)
Query: 114 GLNKVPILLPEATT------ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
G N++ ++ P A L L N I + P + N L+ + ++ N+++ + DA
Sbjct: 84 GYNQIGVVEPGAFALLVHLKNLDLSHNKIADFPWQDLRNLSGLQILKMNNNRLAGLPRDA 143
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-- 225
F LK L SL LN+N LT L +G F L L L+I N F C C + WL +W +
Sbjct: 144 FHSLKDLRSLWLNDNELTTLAEGTFDNLPSLSQLQIFNNPFNCSCKVFWLKKWTENTSVS 203
Query: 226 -RLGLYTKCFAPSHIKGQNILDIPEH 250
G T C AP +KG+ + DIP+H
Sbjct: 204 ITKGGSTLCVAPGRLKGRAVTDIPDH 229
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP---RLGLYTKCFA 61
LN+N LT L +G F L L L+I N F C C + WL +W + G T C A
Sbjct: 155 LNDNELTTLAEGTFDNLPSLSQLQIFNNPFNCSCKVFWLKKWTENTSVSITKGGSTLCVA 214
Query: 62 PSHIKGQNILDIPEHEFKCSGP 83
P +KG+ + DIP+H C P
Sbjct: 215 PGRLKGRAVTDIPDHH--CVAP 234
>gi|345781642|ref|XP_539968.3| PREDICTED: LOW QUALITY PROTEIN: G-protein coupled receptor 124,
partial [Canis lupus familiaris]
Length = 1320
Score = 86.7 bits (213), Expect = 2e-14, Method: Composition-based stats.
Identities = 62/209 (29%), Positives = 91/209 (43%), Gaps = 29/209 (13%)
Query: 73 IPEHEFKCSGPVEKPTGECAAEPSCPHPCR----CADG-------------------IVD 109
+P KCSG E+P G P+P R C G + +
Sbjct: 24 VPIRSCKCSG--ERPKGLSGG---APNPARRRVVCGGGDLPEPPEPGLLPNGTVTLLLSN 78
Query: 110 CREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ 169
+ GL L +L L N I+ + P AF L+R+DLS N+I + D FQ
Sbjct: 79 NKITGLRNGSFLGLSLLEKLDLRNNVISTVQPGAFLGLGELKRLDLSNNRIGCLTSDTFQ 138
Query: 170 GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLG 228
GL L L ++ N + L GVF EL L+ + + CDCHL WL W + R +L
Sbjct: 139 GLPRLLRLNISGNIFSSLQPGVFDELPALKVVDLGTEYLTCDCHLRWLLPWARNRSLQLS 198
Query: 229 LYTKCFAPSHIKGQNILDIPEHEFKCSGS 257
+T C P+ + Q + + E + +C G+
Sbjct: 199 EHTVCAYPAALHAQALGGLQEAQLRCEGA 227
Score = 52.4 bits (124), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Query: 1 MPRTL----NNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGL 55
+PR L + N + L GVF EL L+ + + CDCHL WL W + R +L
Sbjct: 140 LPRLLRLNISGNIFSSLQPGVFDELPALKVVDLGTEYLTCDCHLRWLLPWARNRSLQLSE 199
Query: 56 YTKCFAPSHIKGQNILDIPEHEFKCSGPVE 85
+T C P+ + Q + + E + +C G +E
Sbjct: 200 HTVCAYPAALHAQALGGLQEAQLRCEGALE 229
>gi|348525713|ref|XP_003450366.1| PREDICTED: probable G-protein coupled receptor 125-like
[Oreochromis niloticus]
Length = 1362
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 65/130 (50%)
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL 184
A +L L N I+ + P AF L+R+DL+ N IS + D F+GL SL L L N
Sbjct: 92 ALEKLDLRSNMISHIEPGAFLGLPALKRLDLANNSISCLNSDIFKGLSSLIRLNLTGNMF 151
Query: 185 TYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNI 244
+ L G F L L+ L +CDC+L WL RW+K T+C P ++GQ+I
Sbjct: 152 SSLAQGTFDSLVSLKALDFKTPYLLCDCNLLWLLRWIKDRKISVRNTECSYPQSLQGQSI 211
Query: 245 LDIPEHEFKC 254
I F C
Sbjct: 212 TSIRPELFTC 221
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 8/137 (5%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L N + L G F L L+ L +CDC+L WL RW+K T+C P
Sbjct: 146 LTGNMFSSLAQGTFDSLVSLKALDFKTPYLLCDCNLLWLLRWIKDRKISVRNTECSYPQS 205
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEP--------SCPHPCRCADGIVDCREKGLN 116
++GQ+I I F C P+E P+ + S P C+ + D + +
Sbjct: 206 LQGQSITSIRPELFTCDAPLELPSFQLTPSQRQVVFQGDSLPFQCQASLVAEDMQVLWYH 265
Query: 117 KVPILLPEATTELRLEQ 133
+ ++ P+AT + +E+
Sbjct: 266 RGHMVKPDATQGIFIEK 282
>gi|122921462|pdb|2O6R|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B61
Length = 177
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 79/181 (43%), Gaps = 19/181 (10%)
Query: 97 CPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLS 156
CP C C+ + C KGL VP +P + T L LE N + LP F +L ++ LS
Sbjct: 1 CPSRCSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLS 60
Query: 157 KNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF-------- 208
+NQI + F L LT L L+ N L LP+GVF +L +L+ L + N
Sbjct: 61 QNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIF 120
Query: 209 --ICDCHLSWLHR--WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSK 264
+ WLH W PR+ ++ + K Q KCSGS RS
Sbjct: 121 DRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQG-------SAKCSGSGKPVRSI 173
Query: 265 I 265
I
Sbjct: 174 I 174
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 8/112 (7%)
Query: 295 CPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN 354
CP C C+ + C KGL VP +P + T L ++ L S F + T
Sbjct: 1 CPSRCSCSGTEIRCNSKGLTSVPTGIPSSATRL-------ELESNKLQSLPHGVFDKLTQ 53
Query: 355 RSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ L QN I LP F +L + L +N + LP F +L+ +
Sbjct: 54 LTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKEL 105
>gi|441619524|ref|XP_004088591.1| PREDICTED: relaxin receptor 1 [Nomascus leucogenys]
Length = 731
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 83 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPK 142
P E T EC S P C C +DC E L VP + T + L+ N I +LPP
Sbjct: 109 PFETETPECLVG-SVPVQCLCRGLELDCDETNLRAVPSV-SSNVTAMSLQWNLIRKLPPD 166
Query: 143 AFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLR 202
F NY L+++ L N+I+ +++ AF+GL SLT L L++N +T+L GVF +L RL L
Sbjct: 167 CFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLI 226
Query: 203 ISEN 206
I +N
Sbjct: 227 IEDN 230
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 47/125 (37%), Gaps = 32/125 (25%)
Query: 281 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL 340
P E T EC S P C C +DC E L V P ++ +T M
Sbjct: 109 PFETETPECLVG-SVPVQCLCRGLELDCDETNLRAV----PSVSSNVTAM---------- 153
Query: 341 LYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYK 400
L+ N I +LPP F NY L+++ L+ N IT + AF
Sbjct: 154 -----------------SLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLN 196
Query: 401 RLRRM 405
L ++
Sbjct: 197 SLTKL 201
>gi|332217608|ref|XP_003257951.1| PREDICTED: relaxin receptor 1 isoform 1 [Nomascus leucogenys]
Length = 779
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 83 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPK 142
P E T EC S P C C +DC E L VP + T + L+ N I +LPP
Sbjct: 109 PFETETPECLVG-SVPVQCLCRGLELDCDETNLRAVPSV-SSNVTAMSLQWNLIRKLPPD 166
Query: 143 AFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLR 202
F NY L+++ L N+I+ +++ AF+GL SLT L L++N +T+L GVF +L RL L
Sbjct: 167 CFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLI 226
Query: 203 ISEN 206
I +N
Sbjct: 227 IEDN 230
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 47/125 (37%), Gaps = 32/125 (25%)
Query: 281 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL 340
P E T EC S P C C +DC E L V P ++ +T M
Sbjct: 109 PFETETPECLVG-SVPVQCLCRGLELDCDETNLRAV----PSVSSNVTAM---------- 153
Query: 341 LYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYK 400
L+ N I +LPP F NY L+++ L+ N IT + AF
Sbjct: 154 -----------------SLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLN 196
Query: 401 RLRRM 405
L ++
Sbjct: 197 SLTKL 201
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 81/202 (40%), Gaps = 35/202 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N +T+L GVF +L RL L I +N HLS + +P
Sbjct: 203 LSHNRITFLKPGVFEDLHRLEWLIIEDN------HLSRI-----------------SPPT 239
Query: 65 IKGQN--ILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCRE-KGLNKVPIL 121
G N IL + + P +P C H R ++ L + +
Sbjct: 240 FYGLNSLILLVLMNNVLTRLP---------DKPLCQHMPRLHWLDLEGNHIHNLRNLTFI 290
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
T L + +N I L FA ++L +DL N+I + F+ LK L+ L L+
Sbjct: 291 SCSNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSY 350
Query: 182 NNLTYLPDGVFAELFRLRTLRI 203
N + + F L +L++L +
Sbjct: 351 NPIQKIQANQFDYLVKLKSLSL 372
>gi|157819231|ref|NP_001100555.1| carboxypeptidase N subunit 2 precursor [Rattus norvegicus]
gi|149020006|gb|EDL78154.1| rCG36501 [Rattus norvegicus]
Length = 565
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 112/261 (42%), Gaps = 20/261 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFI-----CDCHLSWLHR-WLKRYPRLGLYTK 58
L++N LP+GV + L L+ L + N+ HL L + WL+ L
Sbjct: 223 LSDNMFARLPEGVLSNLGSLQELFLDSNAITELSPHLFSHLLSLEKLWLQHNAISHLPVS 282
Query: 59 CFAPSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKV 118
F S ++ L++ ++ + P G P H + + E +
Sbjct: 283 AF--SSLRNLTFLNLKDNALRT-----LPAGLFTHNPGLLHLSLSYNQLETVPEGSFANL 335
Query: 119 PILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLT 178
L L L N IT LP F N ++L ++ L N ++ + F L L L
Sbjct: 336 RKL-----ASLTLSHNAITHLPENVFRNLEQLVKLSLDSNNLTVLHPTLFHNLSKLQLLD 390
Query: 179 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPR--LGLYTKCFAP 236
L+ N LT LP G+F + L L + N + CDC LS+L WL+ Y +T C P
Sbjct: 391 LSRNQLTMLPGGIFDTNYDLFNLALLGNPWQCDCRLSYLTSWLRLYNDRIFNTHTFCAGP 450
Query: 237 SHIKGQNILDIPEHEFKCSGS 257
+++KGQ + ++ + + C G+
Sbjct: 451 AYLKGQLVPNLKQEQLVCPGN 471
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 141/353 (39%), Gaps = 52/353 (14%)
Query: 97 CPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDIT------------------- 137
CP C C D + C ++ L +P+ +P T++ + T
Sbjct: 45 CPVGCDCFDRKIFCSDEQLAAIPLDIPSHVTDIVFVETSFTTVGTRAFSGSPNLTKVVFL 104
Query: 138 -----ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
L P AF RL ++++ + S ++ + F L SL LTL+ N L LP+ +F
Sbjct: 105 NTRVHHLEPDAFGGLPRLEDLEVTGSPFSNLSANIFSNLSSLGKLTLDFNRLAALPEDLF 164
Query: 193 AELFRLRTLRISEN-----------SFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK- 240
+ L +L++ N S L+ L + P+ G++ + +K
Sbjct: 165 HHMDTLESLQLQGNQLQTLPGRLFQSLRYLRTLNLAQNLLTQLPK-GMFQSLSSLQILKL 223
Query: 241 GQNILD-IPEHEFKCSGSSMETRSKIYREECSTDFHPY---NSCPVEKPTGECAAEPSCP 296
N+ +PE GS E T+ P+ + +EK + A P
Sbjct: 224 SDNMFARLPEGVLSNLGSLQEL---FLDSNAITELSPHLFSHLLSLEKLWLQHNAISHLP 280
Query: 297 HPCRCA---DGIVDCREKGLNKVPILLPEATTELTYM-VSIDRVDKVLLYSYISNNFKRW 352
+ ++ ++ L +P L L ++ +S ++++ V S+ N ++
Sbjct: 281 VSAFSSLRNLTFLNLKDNALRTLPAGLFTHNPGLLHLSLSYNQLETVPEGSFA--NLRKL 338
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
S L N IT LP F N ++L ++ L+ N++T L P F N +L+ +
Sbjct: 339 A--SLTLSHNAITHLPENVFRNLEQLVKLSLDSNNLTVLHPTLFHNLSKLQLL 389
>gi|197102714|ref|NP_001126672.1| relaxin receptor 1 [Pongo abelii]
gi|75041165|sp|Q5R5V8.1|RXFP1_PONAB RecName: Full=Relaxin receptor 1; AltName: Full=Relaxin family
peptide receptor 1
gi|55732310|emb|CAH92858.1| hypothetical protein [Pongo abelii]
Length = 757
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 83 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPK 142
P E T EC S P C C +DC E L VP + T + L+ N I +LPP
Sbjct: 87 PFEAETPECLVG-SVPVQCLCRGLELDCDETNLRAVPSV-SSNVTAMSLQWNLIRKLPPD 144
Query: 143 AFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLR 202
F NY L+++ L N+I+ +++ AF+GL SLT L L++N +T+L GVF +L RL L
Sbjct: 145 CFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLI 204
Query: 203 ISEN 206
I +N
Sbjct: 205 IEDN 208
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 47/125 (37%), Gaps = 32/125 (25%)
Query: 281 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL 340
P E T EC S P C C +DC E L V P ++ +T M
Sbjct: 87 PFEAETPECLVG-SVPVQCLCRGLELDCDETNLRAV----PSVSSNVTAM---------- 131
Query: 341 LYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYK 400
L+ N I +LPP F NY L+++ L+ N IT + AF
Sbjct: 132 -----------------SLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLN 174
Query: 401 RLRRM 405
L ++
Sbjct: 175 SLTKL 179
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 82/202 (40%), Gaps = 35/202 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N +T+L GVF +L RL L I +N HLS + +P
Sbjct: 181 LSHNRITFLKPGVFEDLHRLEWLIIEDN------HLSRI-----------------SPPT 217
Query: 65 IKGQN--ILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCRE-KGLNKVPIL 121
G N IL + + P +P C H R ++ L + ++
Sbjct: 218 FYGLNSLILLVLMNNVLTRLP---------DKPLCQHMPRLHWLDLEGNHIHNLRNLTLI 268
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
T L + +N I L FA ++L +DL N+I + F+ LK L+ L L+
Sbjct: 269 SCSNLTVLVMGKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSY 328
Query: 182 NNLTYLPDGVFAELFRLRTLRI 203
N + + F L +L++L +
Sbjct: 329 NPIQKIQANQFDYLVKLKSLSL 350
>gi|76096571|gb|ABA39234.1| variable lymphocyte receptor 5' LRR region [Petromyzon marinus]
Length = 191
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 60/113 (53%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C+ K L VP +P T L N IT+L P F + L +DL
Sbjct: 21 ACPSQCSCSGTTVNCKSKSLASVPAGIPSTTHYLDFSYNQITKLEPGVFDSLTALTYLDL 80
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ NQ++ + V F L LT L + +N LT LPDGVF L L+ L +S N
Sbjct: 81 APNQLTALPVGVFDKLTPLTFLNVGDNQLTALPDGVFDRLVNLQRLTLSTNQL 133
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 56/132 (42%), Gaps = 22/132 (16%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKV----------LLYS 343
+CP C C+ V+C+ K L VP +P T L + S +++ K+ L Y
Sbjct: 21 ACPSQCSCSGTTVNCKSKSLASVPAGIPSTTHYLDF--SYNQITKLEPGVFDSLTALTYL 78
Query: 344 YISNN---------FKRWTNRS-RRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPP 393
++ N F + T + + N +T LP F L+R+ L N + +P
Sbjct: 79 DLAPNQLTALPVGVFDKLTPLTFLNVGDNQLTALPDGVFDRLVNLQRLTLSTNQLKSIPR 138
Query: 394 KAFANYKRLRRM 405
AF N K L +
Sbjct: 139 GAFDNLKSLTHI 150
>gi|320165726|gb|EFW42625.1| tyrosine-protein kinase Src42A [Capsaspora owczarzaki ATCC 30864]
Length = 921
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 61/106 (57%)
Query: 101 CRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQI 160
C C+ +V+C K L +P +P ATT+L L N IT +P +FA L + + NQ+
Sbjct: 35 CSCSGTVVNCYGKSLTAIPSGIPTATTDLTLWNNLITSIPAGSFAGLTALTFLRIDSNQL 94
Query: 161 SKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
+ ++ D F GL +LT L LNNN +T +P F+ L L L +++N
Sbjct: 95 TSLSADTFTGLSALTQLALNNNGITSIPASAFSGLTALHNLYLNDN 140
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
A T+L L N IT +P AF+ L + L+ N I+ ++ DAF L +L L ++NN
Sbjct: 106 SALTQLALNNNGITSIPASAFSGLTALHNLYLNDNVITSISADAFTNLTALNYLVMHNNQ 165
Query: 184 LTYLPDGVFAELFRLRTLRISENSF 208
+T LP FA L L L + NS
Sbjct: 166 ITSLPASAFANLTALTQLFLFNNSI 190
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 79/203 (38%), Gaps = 30/203 (14%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TL NN +T +P G FA L L LRI N L+ L + L T+
Sbjct: 64 TLWNNLITSIPAGSFAGLTALTFLRIDSN------QLTSLSA--DTFTGLSALTQL---- 111
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+ I IP F + + H D ++ ++
Sbjct: 112 ALNNNGITSIPASAF--------------SGLTALHNLYLNDNVI----TSISADAFTNL 153
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
A L + N IT LP AFAN L ++ L N I+ ++ DAF GL +L L L +N
Sbjct: 154 TALNYLVMHNNQITSLPASAFANLTALTQLFLFNNSITSISADAFTGLSALVYLALYSNR 213
Query: 184 LTYLPDGVFAELFRLRTLRISEN 206
+T + FA L L L + N
Sbjct: 214 ITSISATAFASLTTLNYLYLHAN 236
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 53/125 (42%), Gaps = 18/125 (14%)
Query: 299 CRCADGIVDCREKGLNKVPILLPEATTELTY-----------------MVSIDRVDKVLL 341
C C+ +V+C K L +P +P ATT+LT ++ R+D L
Sbjct: 35 CSCSGTVVNCYGKSLTAIPSGIPTATTDLTLWNNLITSIPAGSFAGLTALTFLRIDSNQL 94
Query: 342 YSYISNNFKRWTNRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYK 400
S ++ F + ++ L N IT +P AF+ L + L N IT + AF N
Sbjct: 95 TSLSADTFTGLSALTQLALNNNGITSIPASAFSGLTALHNLYLNDNVITSISADAFTNLT 154
Query: 401 RLRRM 405
L +
Sbjct: 155 ALNYL 159
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 36/72 (50%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
A L L N IT + AFA+ L + L NQI+ + AF L +L L LN+N
Sbjct: 202 SALVYLALYSNRITSISATAFASLTTLNYLYLHANQITSIPAGAFTSLTALILLPLNDNP 261
Query: 184 LTYLPDGVFAEL 195
T LP G+F L
Sbjct: 262 FTTLPPGLFKGL 273
>gi|119926505|dbj|BAF43277.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 177
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 72/137 (52%), Gaps = 1/137 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C K L VP +P T ELRL N IT+L P F + +L + L
Sbjct: 11 ACPARCSCSGTTVNCGGKSLASVPAGIPTTTRELRLYTNQITKLEPGVFDSLTQLTIMSL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
+N+++ + F L LT L+L +N L +P G F L L + + N + C C +
Sbjct: 71 RENKLTALPAGVFDKLTQLTELSLRDNQLKSIPRGAFDNLKSLTHIWLYNNPWDCACSDI 130
Query: 215 SWLHRWLKRYPRLGLYT 231
+L RW+ ++P + + T
Sbjct: 131 LYLSRWISQHPGVVIKT 147
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTEL-TYMVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ V+C K L VP +P T EL Y I +++ + S
Sbjct: 11 ACPARCSCSGTTVNCGGKSLASVPAGIPTTTRELRLYTNQITKLEPGVFDSLTQLTI--- 67
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L +N +T LP F +L + L N + +P AF N K L +
Sbjct: 68 ----MSLRENKLTALPAGVFDKLTQLTELSLRDNQLKSIPRGAFDNLKSLTHI 116
>gi|320163976|gb|EFW40875.1| tyrosine-protein kinase CSK [Capsaspora owczarzaki ATCC 30864]
Length = 1378
Score = 86.3 bits (212), Expect = 2e-14, Method: Composition-based stats.
Identities = 89/320 (27%), Positives = 130/320 (40%), Gaps = 40/320 (12%)
Query: 98 PHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSK 157
P C C V+C+ KG +P +P TT+L L+ N IT +P AF L+ I L+
Sbjct: 33 PGVCACTGVTVNCQNKGFTAIPSGIPVNTTQLYLQSNLITNIPASAFTGLTALQVIYLTS 92
Query: 158 NQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWL 217
NQI ++ AF GL +LT ++L NN +T +PD +FA+L L L + N ++
Sbjct: 93 NQIVSISSGAFSGLSALTYVSLFNNLITSIPDSLFADLTALTYLGLHGNLITSMAATAFT 152
Query: 218 HRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPY 277
L RL LY G I I + F S T +Y + +
Sbjct: 153 G--LNVLTRLSLY----------GNQITSISANAF--SNLPALTTLALYDNQLT------ 192
Query: 278 NSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILL-------------PEAT 324
S P + TG A + + I +P L+ A
Sbjct: 193 -SIPADAFTGLSALTELTLYD----NEITSISANSFTSLPALIILSLDSNRITDISANAF 247
Query: 325 TELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRL 383
T LT + +I + L S +N F + S L N+IT + AF L + L
Sbjct: 248 TGLTAL-NILYLSHNQLSSISANAFTGLSGLDSLTLFNNEITSIHVDAFTGLPALTSLYL 306
Query: 384 EQNDITELPPKAFANYKRLR 403
+ N IT +PP F N L+
Sbjct: 307 QSNLITSIPPFVFTNLTALQ 326
Score = 78.2 bits (191), Expect = 7e-12, Method: Composition-based stats.
Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 3/130 (2%)
Query: 79 KCSGPVEKPTGECAAEPSCPHP--CRCADGIVDCREKGLNKVPILLPEATTELRLEQNDI 136
+CS +G C + +C C C+ VDC+ + L +P +P T + L+ N I
Sbjct: 491 QCSEGAMMVSGSCVSH-ACGAGGLCTCSGTTVDCQNRSLTVIPSAMPSNTLTVYLQANQI 549
Query: 137 TELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELF 196
T +P AFA L + + N+I+ + DAF GL +++ L L +NNL +P A L
Sbjct: 550 TSIPASAFAGLSALTILIMFNNKITSIDTDAFTGLTAMSQLNLQDNNLASIPASAIAGLT 609
Query: 197 RLRTLRISEN 206
L+ L +S N
Sbjct: 610 ALKFLDLSNN 619
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 77/303 (25%), Positives = 128/303 (42%), Gaps = 46/303 (15%)
Query: 129 LRLEQNDITELPPKAF-ANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
L L N IT +P AF A+ L +D+S+NQ++ + +AF GL SL+SL L N +T +
Sbjct: 328 LVLAYNQITGIPANAFTADLAALNYLDVSENQVTSIPANAFAGLHSLSSLFLQGNQITSI 387
Query: 188 PDGVFAELFRLRTLRISENSF--ICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK-GQNI 244
F L L L +S+N F + L L P LY +P++ G+N
Sbjct: 388 LTSTFQGLTALTHLILSDNPFTTLPPGLFKGLPNGLILSPPTLLY---MSPNNFTFGENT 444
Query: 245 LDIPEHEFKCSGSSMETRSKIYREE--CSTDFH-------PYNS--CPVEKPTGECA--- 290
+ P S+ + S+ Y+ + C T + P N C +C+
Sbjct: 445 VAPP--------STYGSASEPYQCDTVCGTCYAAGSDACCPSNCLICTSSSVCTQCSEGA 496
Query: 291 --AEPSC-PHP------CRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLL 341
SC H C C+ VDC+ + L +P +P T LT + +++
Sbjct: 497 MMVSGSCVSHACGAGGLCTCSGTTVDCQNRSLTVIPSAMPSNT--LTVYLQANQIT---- 550
Query: 342 YSYISNNFKRWTNRSRRLE-QNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYK 400
S ++ F + + + N IT + AF + ++ L+ N++ +P A A
Sbjct: 551 -SIPASAFAGLSALTILIMFNNKITSIDTDAFTGLTAMSQLNLQDNNLASIPASAIAGLT 609
Query: 401 RLR 403
L+
Sbjct: 610 ALK 612
Score = 53.5 bits (127), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 43/78 (55%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N ++ + AF L + L N+I+ + VDAF GL +LTSL L +N +T +P
Sbjct: 256 LYLSHNQLSSISANAFTGLSGLDSLTLFNNEITSIHVDAFTGLPALTSLYLQSNLITSIP 315
Query: 189 DGVFAELFRLRTLRISEN 206
VF L L+ L ++ N
Sbjct: 316 PFVFTNLTALQILVLAYN 333
Score = 51.6 bits (122), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL 184
A ++L L+ N++ +P A A L+ +DLS N+I+ ++ F GL +L L LN+N +
Sbjct: 586 AMSQLNLQDNNLASIPASAIAGLTALKFLDLSNNKITDISSSEFTGLTALNYLWLNSNRI 645
Query: 185 TYLPDGVFAEL 195
T + F L
Sbjct: 646 TSISANAFTSL 656
Score = 49.3 bits (116), Expect = 0.003, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 131 LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDG 190
L N IT + AFA L +DL N+I+ + +AF L +L +LTLN+N T LP G
Sbjct: 664 LRANWITAISANAFAGVT-LTYLDLQNNRITSIPANAFTSLTALNTLTLNDNPFTTLPPG 722
Query: 191 VFAEL 195
+F L
Sbjct: 723 LFKGL 727
Score = 42.4 bits (98), Expect = 0.36, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 23/103 (22%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLK---------------- 172
L L N IT++ F L + L+ N+I+ ++ +AF L
Sbjct: 614 LDLSNNKITDISSSEFTGLTALNYLWLNSNRITSISANAFTSLPALAFVWLRANWITAIS 673
Query: 173 -------SLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+LT L L NN +T +P F L L TL +++N F
Sbjct: 674 ANAFAGVTLTYLDLQNNRITSIPANAFTSLTALNTLTLNDNPF 716
>gi|76162345|gb|ABA40241.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 169
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 78/169 (46%), Gaps = 13/169 (7%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C++K L VP +P T L L N IT+L P F + L ++L
Sbjct: 1 ACPSQCSCSGTEVHCQKKSLASVPAGIPTTTQVLYLHVNQITKLEPGVFDSLAALTSLEL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
NQ++ V V F L LT L L+ N L LP G F L L + + N + C C +
Sbjct: 61 GGNQLTAVTVGVFDKLTKLTHLALHINQLKSLPRGAFDNLKSLTHIWLLNNPWDCQCTDI 120
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L W+ ++ S I G+ + KCSG++ R+
Sbjct: 121 LYLSGWVAQH------------SGIVGEGWWTVNPDNAKCSGTNTPVRA 157
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V C++K L VP +P TT++ Y+ ++++ K L + ++ T
Sbjct: 1 ACPSQCSCSGTEVHCQKKSLASVPAGIP-TTTQVLYL-HVNQITK--LEPGVFDSLAALT 56
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
S L N +T + F +L + L N + LP AF N K L +
Sbjct: 57 --SLELGGNQLTAVTVGVFDKLTKLTHLALHINQLKSLPRGAFDNLKSLTHI 106
>gi|345307725|ref|XP_001513419.2| PREDICTED: probable G-protein coupled receptor 125 [Ornithorhynchus
anatinus]
Length = 1395
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 82/202 (40%), Gaps = 38/202 (18%)
Query: 91 CAAEPSCPHPCRCA------------DGIVDCREKGLNKV--PILLPEATTELRLEQNDI 136
C+A P P C+ DG V C L +V P LP T L L N I
Sbjct: 110 CSAGPGLPPGCKQDGRPRTPGRPPNPDGKVVCSSLDLARVLPPDTLPNRTVTLILSNNKI 169
Query: 137 TELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL------------ 184
+EL +F+ L R+DL N IS + DAF GL SL L L NN +
Sbjct: 170 SELKNGSFSGLNLLERLDLRNNLISTIDPDAFWGLSSLKRLDLTNNRIGCLNADIFRGLT 229
Query: 185 ------------TYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTK 232
+ L G F L LR+L +CDC++ W+HRW+K T+
Sbjct: 230 NLVRLNLSGNLFSSLAQGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKERNITVRETR 289
Query: 233 CFAPSHIKGQNILDIPEHEFKC 254
C P ++ Q + + + C
Sbjct: 290 CAYPKSLQAQPVTGVKQELLTC 311
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N + L G F L LR+L +CDC++ W+HRW+K T+C P
Sbjct: 236 LSGNLFSSLAQGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKERNITVRETRCAYPKS 295
Query: 65 IKGQNILDIPEHEFKCSGPVEKPT 88
++ Q + + + C P+E P+
Sbjct: 296 LQAQPVTGVKQELLTCDPPLELPS 319
>gi|76162132|gb|ABA40146.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 168
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDCR K + VP +P L L N IT+L P F + +L+ + L
Sbjct: 1 ACPSQCSCDQTTVDCRNKRFSSVPAGIPTDRQNLWLNNNQITKLEPGVFDSLGKLQTLYL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
+N+++ + F L LT L LNNN L +P G F L L + + N + C C +
Sbjct: 61 HQNELTTLPEGVFDKLTQLTYLDLNNNQLKSIPRGAFDNLKSLTYIWLDRNPWDCACSDI 120
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L RW+ ++P L L++ +CSG++ R+
Sbjct: 121 LYLSRWISQHPGLVF-------------GYLNLDPDSARCSGTNTPVRA 156
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 6/109 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C VDCR K + VP +P T ++ +++ K L + ++ +
Sbjct: 1 ACPSQCSCDQTTVDCRNKRFSSVPAGIP--TDRQNLWLNNNQITK--LEPGVFDSLGKL- 55
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
++ L QN++T LP F +L + L N + +P AF N K L
Sbjct: 56 -QTLYLHQNELTTLPEGVFDKLTQLTYLDLNNNQLKSIPRGAFDNLKSL 103
>gi|395815459|ref|XP_003781244.1| PREDICTED: leucine-rich repeat-containing G-protein coupled
receptor 4 isoform 2 [Otolemur garnettii]
Length = 927
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 70/123 (56%), Gaps = 3/123 (2%)
Query: 87 PTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFA 145
P+G AA P C PC C D VDC KGL VP L T L+L ND++ + PKA +
Sbjct: 21 PSG--AAPPLCAAPCSCDGDRRVDCSGKGLTAVPEGLSAFTQALQLAGNDLSFIHPKALS 78
Query: 146 NYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISE 205
K L+ + L NQ+ V +A +GL +L SL L+ N++T +P+ F L +LR L + +
Sbjct: 79 GLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDD 138
Query: 206 NSF 208
NS
Sbjct: 139 NSL 141
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 21/140 (15%)
Query: 285 PTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPE-------ATTELTYM--VSID 334
P+G AA P C PC C D VDC KGL VP L A +L+++ ++
Sbjct: 21 PSG--AAPPLCAAPCSCDGDRRVDCSGKGLTAVPEGLSAFTQALQLAGNDLSFIHPKALS 78
Query: 335 RVDKVLLYSYISNNFKRWTN---------RSRRLEQNDITELPPKAFANYKRLRRIRLEQ 385
+ ++ + + +N K + +S RL+ N IT +P +F +LR + L+
Sbjct: 79 GLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDD 138
Query: 386 NDITELPPKAFANYKRLRRM 405
N +TE+P + +N L+ +
Sbjct: 139 NSLTEVPVRPLSNLPTLQAL 158
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 124 EATTELR---LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN 180
E +LR L+ N +TE+P + +N L+ + L+ N+IS + AF L SL L L+
Sbjct: 126 EGLVQLRHLWLDDNSLTEVPVRPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLH 185
Query: 181 NNNLTYLPDGVFAELFRLRTLRISENSF 208
NN + L F L L TL ++ N+
Sbjct: 186 NNKIKSLGQHCFDGLDNLETLDLNYNNL 213
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 70/167 (41%), Gaps = 45/167 (26%)
Query: 105 DGIVDCR-----EKGLNKVPIL----LPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+G+V R + L +VP+ LP L L N I+ +P AF N L + L
Sbjct: 126 EGLVQLRHLWLDDNSLTEVPVRPLSNLP-TLQALTLALNKISSIPDFAFTNLSSLVVLHL 184
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNL-----------------------TYLPDGVF 192
N+I + F GL +L +L LN NNL + +PDG F
Sbjct: 185 HNNKIKSLGQHCFDGLDNLETLDLNYNNLGEFPQAIKALPSLKELGFHSNSISVIPDGAF 244
Query: 193 AELFRLRTLRISEN--SFICDC---HLSWLH-------RWLKRYPRL 227
LRT+ + +N SF+ + +LS LH ++R+P L
Sbjct: 245 GGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQRFPNL 291
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
A E+ L++N I ++ F LR +DLS+N I ++ AF L +T+L ++ N
Sbjct: 341 HALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIHSRAFAKLGPITNLDVSFNE 400
Query: 184 LTYLP 188
LT P
Sbjct: 401 LTSFP 405
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N+I +LP +F L I L +NQI ++ FQGL SL L L+ N + +
Sbjct: 324 LDLSYNNIRDLP--SFNGCHALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIH 381
Query: 189 DGVFAELFRLRTLRISEN 206
FA+L + L +S N
Sbjct: 382 SRAFAKLGPITNLDVSFN 399
>gi|30851397|gb|AAH52391.1| Gpr125 protein, partial [Mus musculus]
Length = 1383
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 64/126 (50%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N I+ + P AF L+R+DL+ N+I + D F+GL +L L L+ N T L
Sbjct: 172 LDLRNNLISRIAPGAFWGLSSLKRLDLTNNRIGCLNADVFRGLTNLVRLNLSGNLFTSLS 231
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
G F L LR+L +CDC++ W+HRW+K T+C P ++ Q + +
Sbjct: 232 QGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCVYPKSLQAQPVTGVK 291
Query: 249 EHEFKC 254
+ C
Sbjct: 292 QELLTC 297
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N T L G F L LR+L +CDC++ W+HRW+K T+C P
Sbjct: 222 LSGNLFTSLSQGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCVYPKS 281
Query: 65 IKGQNILDIPEHEFKCSGPVEKPT 88
++ Q + + + C P+E P+
Sbjct: 282 LQAQPVTGVKQELLTCDPPLELPS 305
>gi|363733789|ref|XP_420763.3| PREDICTED: probable G-protein coupled receptor 125 [Gallus gallus]
Length = 1322
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 8/146 (5%)
Query: 109 DCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAF 168
+C GLN + L L+ N I+ + P AF L+R+DL+ N+I + D F
Sbjct: 101 NCSFSGLNLLE--------RLDLKNNLISTIDPGAFLGLSSLKRLDLTNNRIGCLNADVF 152
Query: 169 QGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLG 228
+GL +L L L+ N + L G F L L++L + +CDC++ W+H+WLK
Sbjct: 153 KGLVNLIRLNLSGNLFSTLTQGTFDHLGSLKSLEFQTDYLLCDCNILWMHQWLKERNITV 212
Query: 229 LYTKCFAPSHIKGQNILDIPEHEFKC 254
TKC P ++ Q + + + C
Sbjct: 213 RETKCAYPKSLQSQTVTGVKQELLTC 238
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N + L G F L L++L + +CDC++ W+H+WLK TKC P
Sbjct: 163 LSGNLFSTLTQGTFDHLGSLKSLEFQTDYLLCDCNILWMHQWLKERNITVRETKCAYPKS 222
Query: 65 IKGQNILDIPEHEFKCSGPVEKPT 88
++ Q + + + C P+E P+
Sbjct: 223 LQSQTVTGVKQELLTCEPPLELPS 246
>gi|148705696|gb|EDL37643.1| mCG123902, isoform CRA_a [Mus musculus]
Length = 1327
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 64/126 (50%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N I+ + P AF L+R+DL+ N+I + D F+GL +L L L+ N T L
Sbjct: 116 LDLRNNLISRIAPGAFWGLSSLKRLDLTNNRIGCLNADVFRGLTNLVRLNLSGNLFTSLS 175
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
G F L LR+L +CDC++ W+HRW+K T+C P ++ Q + +
Sbjct: 176 QGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCVYPKSLQAQPVTGVK 235
Query: 249 EHEFKC 254
+ C
Sbjct: 236 QELLTC 241
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N T L G F L LR+L +CDC++ W+HRW+K T+C P
Sbjct: 166 LSGNLFTSLSQGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCVYPKS 225
Query: 65 IKGQNILDIPEHEFKCSGPVEKPT 88
++ Q + + + C P+E P+
Sbjct: 226 LQAQPVTGVKQELLTCDPPLELPS 249
>gi|320167410|gb|EFW44309.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 702
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 133/343 (38%), Gaps = 58/343 (16%)
Query: 101 CRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQI 160
C C+ VDC L +P +P ATT+L L N+IT +P AFA+ RL + L NQI
Sbjct: 36 CGCSGTTVDCHGNSLTAIPGGIPTATTQLLLYTNNITSIPANAFASLTRLTILTLDVNQI 95
Query: 161 SKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTL--------RISENSFICDC 212
+ + AF GL +LT L+L +N +T + F +L +L L IS N+F
Sbjct: 96 TSIPATAFTGLSALTLLSLGSNPITSMSASAFTDLTKLTQLSLDNTPITSISANAFAGLS 155
Query: 213 HLSWLHRWLKRYPRLGLYTKCFA------PSHIKGQNILDIPEHEFK---------CSGS 257
L+ + +L + + FA ++ G I I + F S +
Sbjct: 156 ALTQM--FLYQTQITSISASAFADLRSLQKLYLYGNRITSISANAFTGLTKLAYLDLSYN 213
Query: 258 SMETRSKIYREECS--TD----FHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREK 311
+ + S + S TD F+ +S TG +A I
Sbjct: 214 QITSISANAFADLSSLTDLRLYFNQMSSLAANTFTG-LSALTQLSLLNNQITAISANAFT 272
Query: 312 GLNKVPIL-----------------LPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN 354
GLN + +L LP T Y +I + +N F +
Sbjct: 273 GLNALKLLYLHNNLITTIAANSFAGLPSLTVLQVYNNTITSIS--------ANAFTGLSA 324
Query: 355 RSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
+ L N IT +P AF L+ + L+ N T LPP F
Sbjct: 325 LTMFLLNYNQITSIPASAFTELTTLQVLALDNNPFTTLPPGLF 367
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 44/107 (41%), Gaps = 30/107 (28%)
Query: 299 CRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRR 358
C C+ VDC L +P +P ATT+L LLY+
Sbjct: 36 CGCSGTTVDCHGNSLTAIPGGIPTATTQL------------LLYT--------------- 68
Query: 359 LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N+IT +P AFA+ RL + L+ N IT +P AF L +
Sbjct: 69 ---NNITSIPANAFASLTRLTILTLDVNQITSIPATAFTGLSALTLL 112
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 35/69 (50%)
Query: 127 TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTY 186
T L++ N IT + AF L L+ NQI+ + AF L +L L L+NN T
Sbjct: 302 TVLQVYNNTITSISANAFTGLSALTMFLLNYNQITSIPASAFTELTTLQVLALDNNPFTT 361
Query: 187 LPDGVFAEL 195
LP G+F L
Sbjct: 362 LPPGLFQGL 370
>gi|81175507|gb|ABB59090.1| variable lymphocyte receptor A [Eptatretus stoutii]
Length = 300
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 82/178 (46%), Gaps = 27/178 (15%)
Query: 101 CRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKN 158
C C D VDC L +P +P TT+LRL QN +++L PKAF + +L + L +N
Sbjct: 34 CTCNDQTKNVDCSNIKLTAIPSNIPPDTTQLRLHQNSLSKLSPKAFHHLSKLTYLSLGEN 93
Query: 159 QISKVAVDAFQGLKSLTSLTLNNNNLTYL------------------------PDGVFAE 194
Q+ + F L LT L LN N L L PDGVF
Sbjct: 94 QLQSLPAGVFDHLTKLTILWLNQNKLQSLPHGVFDKLTELKTLELGSNQLQRVPDGVFDS 153
Query: 195 LFRLRTLRISENSFICDCH-LSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
L L TL +S N + C C+ + ++ +WLK+ GL A G+ +L+I E E
Sbjct: 154 LLNLNTLDLSINPWDCTCNDILYMAKWLKKKQDEGLGGVDTAGCEEGGKAVLEITEEE 211
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-LSWLHRWLKRYPRLGLYTKCFAPS 63
L +N L +PDGVF L L TL +S N + C C+ + ++ +WLK+ GL A
Sbjct: 138 LGSNQLQRVPDGVFDSLLNLNTLDLSINPWDCTCNDILYMAKWLKKKQDEGLGGVDTAGC 197
Query: 64 HIKGQNILDIPEHE 77
G+ +L+I E E
Sbjct: 198 EEGGKAVLEITEEE 211
>gi|345786374|ref|XP_541813.3| PREDICTED: leucine-rich repeats and immunoglobulin-like domains 1
[Canis lupus familiaris]
Length = 1059
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 114/260 (43%), Gaps = 22/260 (8%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L NN++ L DG F L R+ L + NS + + + WL+ L +L L + A +
Sbjct: 199 LQRNNISKLTDGAFWGLSRIHVLHLEYNSLV-EVNRGWLY-GLSALHQLHLSSNSIARIN 256
Query: 65 IKGQNILDIPE-HEFKCSGP-----VEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKV 118
+G + P+ HE S E+ + ++ I + KGL +
Sbjct: 257 REGWSF--CPKLHELVLSFNNLTRLDEESLADLSSLSILRLSHNSISHIAEGAFKGLKNL 314
Query: 119 PILLPEATTELRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLT 175
+ L L+ N+I+ E AF L ++ L N+I VA AF GL+ L
Sbjct: 315 RV--------LDLDHNEISGTIEDTSGAFTGLDSLSKLTLFGNKIKSVAKRAFSGLEGLE 366
Query: 176 SLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW-LKRYPRLGLYTKCF 234
L L N + + F ++ L+ LRIS +SF+CDC L WL W L R + + C
Sbjct: 367 HLNLGENAIRSVQSDAFVKMKNLKELRISSDSFLCDCQLKWLPPWLLSRTLQAFVTATCA 426
Query: 235 APSHIKGQNILDIPEHEFKC 254
P +KGQ+I + F C
Sbjct: 427 HPESLKGQSIFSVSPESFVC 446
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
LRL +N IT+LP KAF RL ++DL++N+I + FQGL SL L L NN++ L
Sbjct: 150 LRLSKNRITQLPMKAF-KLPRLTQLDLNRNRIRVIEGLTFQGLDSLEVLKLQRNNISKLT 208
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLH 218
DG F L R+ L + NS + + + WL+
Sbjct: 209 DGAFWGLSRIHVLHLEYNSLV-EVNRGWLY 237
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL-KSLTSLTLNNNNLTYL 187
L L N+ITE+ F + R++ ++L+ N+I + AF GL +SL L L+ N +T L
Sbjct: 101 LDLSSNNITEIRNTCFPHGLRIKELNLASNRIGTLESGAFDGLSRSLVMLRLSKNRITQL 160
Query: 188 PDGVFAELFRLRTLRISEN 206
P F +L RL L ++ N
Sbjct: 161 PMKAF-KLPRLTQLDLNRN 178
>gi|327284101|ref|XP_003226777.1| PREDICTED: G-protein coupled receptor 124-like [Anolis
carolinensis]
Length = 1298
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 85/203 (41%), Gaps = 41/203 (20%)
Query: 96 SCPHP---CRCADGI-----------VDCREKGLNKVP--ILLPEATTELRLEQNDITEL 139
SCP P C+CA G V C P LLP T L L N IT L
Sbjct: 23 SCPVPVRGCKCAGGERGKGSSAARRRVSCSGGDATDTPPASLLPNGTVALLLSNNKITTL 82
Query: 140 ------------------------PPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLT 175
P AF L+R+DLS N+I + FQGL SL
Sbjct: 83 KNASFFGLHALEKLDLKSNLISTIQPGAFLGLSDLKRLDLSNNRIGCLNTGIFQGLTSLI 142
Query: 176 SLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCF 234
L ++ N + L GVF EL L+ L + CDC+L W+ W K + ++ T C
Sbjct: 143 RLNMSGNIFSSLHYGVFDELISLKVLDFATEHLTCDCNLRWVLAWSKNHSVQISDKTLCI 202
Query: 235 APSHIKGQNILDIPEHEFKCSGS 257
PS++ G+ + + E + +C G+
Sbjct: 203 YPSNLHGKPLRNTREGQMRCEGA 225
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFAPS 63
++ N + L GVF EL L+ L + CDC+L W+ W K + ++ T C PS
Sbjct: 146 MSGNIFSSLHYGVFDELISLKVLDFATEHLTCDCNLRWVLAWSKNHSVQISDKTLCIYPS 205
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPT 88
++ G+ + + E + +C G E T
Sbjct: 206 NLHGKPLRNTREGQMRCEGAPELHT 230
>gi|241896916|ref|NP_598672.1| probable G-protein coupled receptor 125 precursor [Mus musculus]
gi|341941080|sp|Q7TT36.3|GP125_MOUSE RecName: Full=Probable G-protein coupled receptor 125; Flags:
Precursor
Length = 1310
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 64/126 (50%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N I+ + P AF L+R+DL+ N+I + D F+GL +L L L+ N T L
Sbjct: 99 LDLRNNLISRIAPGAFWGLSSLKRLDLTNNRIGCLNADVFRGLTNLVRLNLSGNLFTSLS 158
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
G F L LR+L +CDC++ W+HRW+K T+C P ++ Q + +
Sbjct: 159 QGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCVYPKSLQAQPVTGVK 218
Query: 249 EHEFKC 254
+ C
Sbjct: 219 QELLTC 224
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N T L G F L LR+L +CDC++ W+HRW+K T+C P
Sbjct: 149 LSGNLFTSLSQGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCVYPKS 208
Query: 65 IKGQNILDIPEHEFKCSGPVEKPT 88
++ Q + + + C P+E P+
Sbjct: 209 LQAQPVTGVKQELLTCDPPLELPS 232
>gi|157676757|emb|CAP08013.1| zgc:101901 [Danio rerio]
Length = 567
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 90/229 (39%), Gaps = 57/229 (24%)
Query: 97 CPHPCRCAD----GIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYK---- 148
CP C C+D VDC K L +VP+ LP + L L N I L K F N
Sbjct: 22 CPKQCACSDKYNHQFVDCAYKDLVEVPVGLPSNASTLSLSANKIKVLKSKTFVNVTQVTS 81
Query: 149 --------------------RLRRIDLSKNQI------------------------SKVA 164
+L+ +D+S N+I +
Sbjct: 82 LWLAHNEIITVERDTLAPLIQLKNLDISNNKIVHFPWEDLANLGALQLLKMNNNEMVSIP 141
Query: 165 VDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKR- 223
+AF LK L S+ +NNN T + G F L + L+I N FIC C+L WL W+ +
Sbjct: 142 KNAFSNLKDLRSIRINNNKFTTIVQGTFDSLAAMSHLQIFHNPFICSCNLEWLRDWILKS 201
Query: 224 ---YPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREE 269
P C APSH+KG + +P+ K S+ + I + E
Sbjct: 202 SISIPEQN-NIACDAPSHLKGSQVTSMPKLNCKAPSVSITYQPNIEKTE 249
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKR----YPRLGLYTKCF 60
+NNN T + G F L + L+I N FIC C+L WL W+ + P C
Sbjct: 156 INNNKFTTIVQGTFDSLAAMSHLQIFHNPFICSCNLEWLRDWILKSSISIPEQN-NIACD 214
Query: 61 APSHIKGQNILDIPEHEFKCSGP 83
APSH+KG + +P + C P
Sbjct: 215 APSHLKGSQVTSMP--KLNCKAP 235
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 55/133 (41%), Gaps = 22/133 (16%)
Query: 295 CPHPCRCAD----GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFK 350
CP C C+D VDC K L +VP+ LP + L+ + +V K + ++
Sbjct: 22 CPKQCACSDKYNHQFVDCAYKDLVEVPVGLPSNASTLSLSANKIKVLKSKTFVNVTQVTS 81
Query: 351 RWTN------------------RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELP 392
W ++ + N I P + AN L+ +++ N++ +P
Sbjct: 82 LWLAHNEIITVERDTLAPLIQLKNLDISNNKIVHFPWEDLANLGALQLLKMNNNEMVSIP 141
Query: 393 PKAFANYKRLRRM 405
AF+N K LR +
Sbjct: 142 KNAFSNLKDLRSI 154
>gi|13537355|dbj|BAB40659.1| membrane glycoprotein LIG-1 [Homo sapiens]
Length = 1094
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 112/258 (43%), Gaps = 18/258 (6%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L NN++ L DG F L ++ L + NS + + + L+ L +L L A H
Sbjct: 242 LQRNNISKLTDGAFWGLSKMHVLHLEYNSLV-EVNSGSLY-GLTALHQLHLSNNSIARIH 299
Query: 65 IKG----QNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
KG Q + ++ + E+ E ++ I + KGL + +
Sbjct: 300 RKGWSFCQKLHELVLSFNNLTRLDEESLAELSSLSVLRLSHNSISHIAEGAFKGLRSLRV 359
Query: 121 LLPEATTELRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSL 177
L L+ N+I+ E AF+ L ++ L N+I VA AF GL+ L L
Sbjct: 360 L--------DLDHNEISGTIEDTSGAFSGLDSLSKLTLFGNKIKSVAKRAFSGLEGLEHL 411
Query: 178 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAP 236
L N + + F ++ L+ L IS +SF+CDC L WL WL R + + C P
Sbjct: 412 NLGGNAIRSVQFDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLIGRMLQAFVTATCAHP 471
Query: 237 SHIKGQNILDIPEHEFKC 254
+KGQ+I +P F C
Sbjct: 472 ESLKGQSIFSVPPESFVC 489
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 133 QNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
+N IT+LP +AF RL ++DL++N+I + FQGL SL L L NN++ L DG F
Sbjct: 197 KNRITQLPVRAF-KLPRLTQLDLNRNRIRLIEGLTFQGLNSLEVLKLQRNNISKLTDGAF 255
Query: 193 AELFRLRTLRISENSFI 209
L ++ L + NS +
Sbjct: 256 WGLSKMHVLHLEYNSLV 272
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Query: 106 GIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAV 165
+DC +GL +P LP T L L N ++E+ P F + L+ + L+ N+++ AV
Sbjct: 50 DSLDCGGRGLAALPGDLPSWTRSLNLSYNKLSEIDPAGFEDLPNLQEVYLNNNELT--AV 107
Query: 166 DAFQGLKS-LTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ S + SL L +N + + L L +S N+
Sbjct: 108 PSLGAASSHVVSLFLQHNKIRSVEGSQLKAYLSLEVLDLSLNNI 151
>gi|119926333|dbj|BAF43206.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 192
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 74/170 (43%), Gaps = 25/170 (14%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDCR K L+ VP +P L L+ N IT+L P F + +L ++L
Sbjct: 11 ACPARCSCSGTTVDCRNKRLSSVPAGIPTTAQSLSLQVNQITKLEPGVFDSLTKLTELNL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF--ICDCH 213
NQ++ + V F L LT L L N L LP+GVF L L+ L + N I D
Sbjct: 71 GGNQLTALPVGVFDKLTQLTHLALGGNQLQVLPEGVFDRLGNLQQLGLHVNQLKSIPDGA 130
Query: 214 LS--------WLH---------------RWLKRYPRLGLYTKCFAPSHIK 240
+ WLH RW+ ++P Y P K
Sbjct: 131 FARLSSLTHVWLHTNPWDCACSDILYLSRWISQHPGFVYYNWNVDPDSAK 180
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ VDCR K L+ VP +P TT + + ++++ K L + ++ + T
Sbjct: 11 ACPARCSCSGTTVDCRNKRLSSVPAGIP--TTAQSLSLQVNQITK--LEPGVFDSLTKLT 66
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L N +T LP F +L + L N + LP F L+++
Sbjct: 67 ELN--LGGNQLTALPVGVFDKLTQLTHLALGGNQLQVLPEGVFDRLGNLQQL 116
>gi|119588691|gb|EAW68285.1| leucine-rich repeat-containing G protein-coupled receptor 4,
isoform CRA_a [Homo sapiens]
Length = 927
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 70/123 (56%), Gaps = 3/123 (2%)
Query: 87 PTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFA 145
P+G AA P C PC C D VDC KGL VP L T L+L ND++ + PKA +
Sbjct: 21 PSG--AAPPLCAAPCSCDGDRRVDCSGKGLTAVPEGLSAFTQALQLAGNDLSFIHPKALS 78
Query: 146 NYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISE 205
K L+ + L NQ+ V +A +GL +L SL L+ N++T +P+ F L +LR L + +
Sbjct: 79 GLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDD 138
Query: 206 NSF 208
NS
Sbjct: 139 NSL 141
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 21/140 (15%)
Query: 285 PTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPE-------ATTELTYM--VSID 334
P+G AA P C PC C D VDC KGL VP L A +L+++ ++
Sbjct: 21 PSG--AAPPLCAAPCSCDGDRRVDCSGKGLTAVPEGLSAFTQALQLAGNDLSFIHPKALS 78
Query: 335 RVDKVLLYSYISNNFKRWTN---------RSRRLEQNDITELPPKAFANYKRLRRIRLEQ 385
+ ++ + + +N K + +S RL+ N IT +P +F +LR + L+
Sbjct: 79 GLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDD 138
Query: 386 NDITELPPKAFANYKRLRRM 405
N +TE+P +N L+ +
Sbjct: 139 NSLTEVPVHPLSNLPTLQAL 158
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 124 EATTELR---LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN 180
E +LR L+ N +TE+P +N L+ + L+ N+IS + AF L SL L L+
Sbjct: 126 EGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLH 185
Query: 181 NNNLTYLPDGVFAELFRLRTLRISENSF 208
NN + L F L L TL ++ N+
Sbjct: 186 NNKIRSLSQHCFDGLDNLETLDLNYNNL 213
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 11/112 (9%)
Query: 105 DGIVDCR-----EKGLNKVPIL----LPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+G+V R + L +VP+ LP L L N I+ +P AF N L + L
Sbjct: 126 EGLVQLRHLWLDDNSLTEVPVHPLSNLP-TLQALTLALNKISSIPDFAFTNLSSLVVLHL 184
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENS 207
N+I ++ F GL +L +L LN NNL P + A L L+ L NS
Sbjct: 185 HNNKIRSLSQHCFDGLDNLETLDLNYNNLGEFPQAIKA-LPSLKELGFHSNS 235
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
A E+ L++N I ++ F LR +DLS+N I ++ AF L +T+L ++ N
Sbjct: 341 HALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIHSRAFATLGPITNLDVSFNE 400
Query: 184 LTYLP 188
LT P
Sbjct: 401 LTSFP 405
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N+I +LP +F L I L +NQI ++ FQGL SL L L+ N + +
Sbjct: 324 LDLSYNNIRDLP--SFNGCHALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIH 381
Query: 189 DGVFAELFRLRTLRISEN 206
FA L + L +S N
Sbjct: 382 SRAFATLGPITNLDVSFN 399
>gi|61806620|ref|NP_001013541.1| immunoglobulin superfamily containing leucine-rich repeat protein 2
precursor [Danio rerio]
gi|60551038|gb|AAH90831.1| Immunoglobulin superfamily containing leucine-rich repeat 2 [Danio
rerio]
Length = 712
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 90/229 (39%), Gaps = 57/229 (24%)
Query: 97 CPHPCRCAD----GIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYK---- 148
CP C C+D VDC K L +VP+ LP + L L N I L K F N
Sbjct: 22 CPKQCACSDKYNHQFVDCAYKDLVEVPVGLPSNASTLSLSANKIKVLKSKTFVNVTQVTS 81
Query: 149 --------------------RLRRIDLSKNQI------------------------SKVA 164
+L+ +D+S N+I +
Sbjct: 82 LWLAHNEIITVERDTLAPLIQLKNLDISNNKIVHFPWEDLANLGALQLLKMNNNEMVSIP 141
Query: 165 VDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKR- 223
+AF LK L S+ +NNN T + G F L + L+I N FIC C+L WL W+ +
Sbjct: 142 KNAFSNLKDLRSIRINNNKFTTIVQGTFDSLAAMSHLQIFHNPFICSCNLEWLRDWILKS 201
Query: 224 ---YPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREE 269
P C APSH+KG + +P+ K S+ + I + E
Sbjct: 202 SISIPEQN-NIACDAPSHLKGSQVTSMPKLNCKAPSVSITYQPNIEKTE 249
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKR----YPRLGLYTKCF 60
+NNN T + G F L + L+I N FIC C+L WL W+ + P C
Sbjct: 156 INNNKFTTIVQGTFDSLAAMSHLQIFHNPFICSCNLEWLRDWILKSSISIPEQN-NIACD 214
Query: 61 APSHIKGQNILDIPEHEFKCSGP 83
APSH+KG + +P + C P
Sbjct: 215 APSHLKGSQVTSMP--KLNCKAP 235
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 55/133 (41%), Gaps = 22/133 (16%)
Query: 295 CPHPCRCAD----GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFK 350
CP C C+D VDC K L +VP+ LP + L+ + +V K + ++
Sbjct: 22 CPKQCACSDKYNHQFVDCAYKDLVEVPVGLPSNASTLSLSANKIKVLKSKTFVNVTQVTS 81
Query: 351 RWTN------------------RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELP 392
W ++ + N I P + AN L+ +++ N++ +P
Sbjct: 82 LWLAHNEIITVERDTLAPLIQLKNLDISNNKIVHFPWEDLANLGALQLLKMNNNEMVSIP 141
Query: 393 PKAFANYKRLRRM 405
AF+N K LR +
Sbjct: 142 KNAFSNLKDLRSI 154
>gi|14423349|gb|AAK62357.1|AF381545_1 membrane glycoprotein LRIG1 [Homo sapiens]
Length = 1093
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 112/258 (43%), Gaps = 18/258 (6%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L NN++ L DG F L ++ L + NS + + + L+ L +L L A H
Sbjct: 242 LQRNNISKLTDGAFWGLSKMHVLHLEYNSLV-EVNSGSLY-GLTALHQLHLSNNSIARIH 299
Query: 65 IKG----QNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
KG Q + ++ + E+ E ++ I + KGL + +
Sbjct: 300 RKGWSFCQKLHELVLSFNNLTRLDEESLAELSSLSVLRLSHNSISHIAEGAFKGLRSLRV 359
Query: 121 LLPEATTELRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSL 177
L L+ N+I+ E AF+ L ++ L N+I VA AF GL+ L L
Sbjct: 360 L--------DLDHNEISGTIEDTSGAFSGLDSLSKLTLFGNKIKSVAKRAFSGLEGLEHL 411
Query: 178 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAP 236
L N + + F ++ L+ L IS +SF+CDC L WL WL R + + C P
Sbjct: 412 NLGGNAIRSVQFDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLIGRMLQAFVTATCAHP 471
Query: 237 SHIKGQNILDIPEHEFKC 254
+KGQ+I +P F C
Sbjct: 472 ESLKGQSIFSVPPESFVC 489
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 133 QNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
+N IT+LP +AF RL ++DL++N+I + FQGL SL L L NN++ L DG F
Sbjct: 197 KNRITQLPVRAF-KLPRLTQLDLNRNRIRLIEGLTFQGLNSLEVLKLQRNNISKLTDGAF 255
Query: 193 AELFRLRTLRISENSFI 209
L ++ L + NS +
Sbjct: 256 WGLSKMHVLHLEYNSLV 272
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Query: 106 GIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAV 165
+DC +GL +P LP T L L N ++E+ P F + L+ + L+ N+++ AV
Sbjct: 50 DSLDCGGRGLAALPGDLPSWTRSLNLSYNKLSEIDPAGFEDLPNLQEVYLNNNELT--AV 107
Query: 166 DAFQGLKS-LTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ S + SL L +N + + L L +S N+
Sbjct: 108 PSLGAASSHVVSLFLQHNKIRSVEGSQLKAYLSLEVLDLSLNNI 151
>gi|63995606|gb|AAY41039.1| unknown [Homo sapiens]
Length = 260
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 83 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPK 142
P E T EC S P C C +DC E L VP + T + L+ N I +LPP
Sbjct: 24 PFEAETPECLVG-SVPVQCLCQGLELDCDETNLRAVPSV-SSNVTAMSLQWNLIRKLPPD 81
Query: 143 AFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLR 202
F NY L+++ L N+I+ +++ AF+GL SLT L L++N +T+L GVF +L RL L
Sbjct: 82 CFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLI 141
Query: 203 ISEN 206
I +N
Sbjct: 142 IEDN 145
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 47/125 (37%), Gaps = 32/125 (25%)
Query: 281 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL 340
P E T EC S P C C +DC E L V P ++ +T M
Sbjct: 24 PFEAETPECLVG-SVPVQCLCQGLELDCDETNLRAV----PSVSSNVTAM---------- 68
Query: 341 LYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYK 400
L+ N I +LPP F NY L+++ L+ N IT + AF
Sbjct: 69 -----------------SLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLN 111
Query: 401 RLRRM 405
L ++
Sbjct: 112 SLTKL 116
>gi|397480861|ref|XP_003811685.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 1 [Pan paniscus]
Length = 1104
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 112/258 (43%), Gaps = 18/258 (6%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L NN++ L DG F L ++ L + NS + + + L+ L +L L A H
Sbjct: 296 LQRNNISKLTDGAFWGLSKMHVLHLEYNSLV-EVNSGSLY-GLTALHQLHLSNNSIARIH 353
Query: 65 IKG----QNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
KG Q + ++ + E+ E ++ I + KGL + +
Sbjct: 354 RKGWSFCQKLHELVLSFNNLTRLDEESLAELSSLSVLRLSHNSISHIAEGAFKGLRSLRV 413
Query: 121 LLPEATTELRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSL 177
L L+ N+I+ E AF+ L ++ L N+I VA AF GL+ L L
Sbjct: 414 L--------DLDHNEISGTIEDTSGAFSGLDSLSKLTLFGNKIKSVAKRAFSGLEGLEHL 465
Query: 178 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAP 236
L N + + F ++ L+ L IS +SF+CDC L WL WL R + + C P
Sbjct: 466 NLGGNAIRSVQFDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLIGRMLQAFVTATCAHP 525
Query: 237 SHIKGQNILDIPEHEFKC 254
+KGQ+I +P F C
Sbjct: 526 ESLKGQSIFSVPPESFVC 543
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 133 QNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
+N IT+LP +AF RL ++DL++N+I + FQGL SL L L NN++ L DG F
Sbjct: 251 KNRITQLPVRAF-KLPRLTQLDLNRNRIRLIEGLTFQGLNSLEVLKLQRNNISKLTDGAF 309
Query: 193 AELFRLRTLRISENSFI 209
L ++ L + NS +
Sbjct: 310 WGLSKMHVLHLEYNSLV 326
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Query: 106 GIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAV 165
+DC +GL +P LP T L L N ++E+ P F + L+ + L+ N+++ AV
Sbjct: 104 DSLDCGGRGLAALPGDLPSWTRSLNLSYNKLSEIDPAGFEDLPNLQEVYLNNNELT--AV 161
Query: 166 DAFQGLKS-LTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ S + SL L +N + + L L +S N+
Sbjct: 162 PSLGAASSHVVSLFLQHNKIRSVEGNQLKAYLSLEVLDLSLNNI 205
>gi|119585856|gb|EAW65452.1| leucine-rich repeats and immunoglobulin-like domains 1, isoform
CRA_a [Homo sapiens]
gi|223461635|gb|AAI40908.1| Leucine-rich repeats and immunoglobulin-like domains 1 [Homo
sapiens]
Length = 1093
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 112/258 (43%), Gaps = 18/258 (6%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L NN++ L DG F L ++ L + NS + + + L+ L +L L A H
Sbjct: 242 LQRNNISKLTDGAFWGLSKMHVLHLEYNSLV-EVNSGSLY-GLTALHQLHLSNNSIARIH 299
Query: 65 IKG----QNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
KG Q + ++ + E+ E ++ I + KGL + +
Sbjct: 300 RKGWSFCQKLHELVLSFNNLTRLDEESLAELSSLSVLRLSHNSISHIAEGAFKGLRSLRV 359
Query: 121 LLPEATTELRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSL 177
L L+ N+I+ E AF+ L ++ L N+I VA AF GL+ L L
Sbjct: 360 L--------DLDHNEISGTIEDTSGAFSGLDSLSKLTLFGNKIKSVAKRAFSGLEGLEHL 411
Query: 178 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAP 236
L N + + F ++ L+ L IS +SF+CDC L WL WL R + + C P
Sbjct: 412 NLGGNAIRSVQFDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLIGRMLQAFVTATCAHP 471
Query: 237 SHIKGQNILDIPEHEFKC 254
+KGQ+I +P F C
Sbjct: 472 ESLKGQSIFSVPPESFVC 489
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 133 QNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
+N IT+LP +AF RL ++DL++N+I + FQGL SL L L NN++ L DG F
Sbjct: 197 KNRITQLPVRAF-KLPRLTQLDLNRNRIRLIEGLTFQGLNSLEVLKLQRNNISKLTDGAF 255
Query: 193 AELFRLRTLRISENSFI 209
L ++ L + NS +
Sbjct: 256 WGLSKMHVLHLEYNSLV 272
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Query: 106 GIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAV 165
+DC +GL +P LP T L L N ++E+ P F + L+ + L+ N+++ AV
Sbjct: 50 DSLDCGGRGLAALPGDLPSWTRSLNLSYNKLSEIDPAGFEDLPNLQEVYLNNNELT--AV 107
Query: 166 DAFQGLKS-LTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ S + SL L +N + + L L +S N+
Sbjct: 108 PSLGAASSHVVSLFLQHNKIRSVEGSQLKAYLSLEVLDLSLNNI 151
>gi|54607118|ref|NP_056356.2| leucine-rich repeats and immunoglobulin-like domains protein 1
precursor [Homo sapiens]
gi|143811415|sp|Q96JA1.2|LRIG1_HUMAN RecName: Full=Leucine-rich repeats and immunoglobulin-like domains
protein 1; Short=LIG-1; Flags: Precursor
Length = 1093
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 112/258 (43%), Gaps = 18/258 (6%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L NN++ L DG F L ++ L + NS + + + L+ L +L L A H
Sbjct: 242 LQRNNISKLTDGAFWGLSKMHVLHLEYNSLV-EVNSGSLY-GLTALHQLHLSNNSIARIH 299
Query: 65 IKG----QNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
KG Q + ++ + E+ E ++ I + KGL + +
Sbjct: 300 RKGWSFCQKLHELVLSFNNLTRLDEESLAELSSLSVLRLSHNSISHIAEGAFKGLRSLRV 359
Query: 121 LLPEATTELRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSL 177
L L+ N+I+ E AF+ L ++ L N+I VA AF GL+ L L
Sbjct: 360 L--------DLDHNEISGTIEDTSGAFSGLDSLSKLTLFGNKIKSVAKRAFSGLEGLEHL 411
Query: 178 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAP 236
L N + + F ++ L+ L IS +SF+CDC L WL WL R + + C P
Sbjct: 412 NLGGNAIRSVQFDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLIGRMLQAFVTATCAHP 471
Query: 237 SHIKGQNILDIPEHEFKC 254
+KGQ+I +P F C
Sbjct: 472 ESLKGQSIFSVPPESFVC 489
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 133 QNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
+N IT+LP +AF RL ++DL++N+I + FQGL SL L L NN++ L DG F
Sbjct: 197 KNRITQLPVRAF-KLPRLTQLDLNRNRIRLIEGLTFQGLNSLEVLKLQRNNISKLTDGAF 255
Query: 193 AELFRLRTLRISENSFI 209
L ++ L + NS +
Sbjct: 256 WGLSKMHVLHLEYNSLV 272
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Query: 106 GIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAV 165
+DC +GL +P LP T L L N ++E+ P F + L+ + L+ N+++ AV
Sbjct: 50 DSLDCGGRGLAALPGDLPSWTRSLNLSYNKLSEIDPAGFEDLPNLQEVYLNNNELT--AV 107
Query: 166 DAFQGLKS-LTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ S + SL L +N + + L L +S N+
Sbjct: 108 PSLGAASSHVVSLFLQHNKIRSVEGSQLKAYLSLEVLDLSLNNI 151
>gi|432105208|gb|ELK31564.1| Carboxypeptidase N subunit 2 [Myotis davidii]
Length = 365
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 2/132 (1%)
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL 184
A L L N I LP F + L +++L N ++ + D FQ L L L+L+ N L
Sbjct: 132 ALHSLTLSHNAIASLPAGVFRDLTELVKLNLGSNNLTALHADLFQNLTRLELLSLSRNLL 191
Query: 185 TYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPR--LGLYTKCFAPSHIKGQ 242
LP G+F + L L + N + CDCHL++L WL++Y + T C P+++KGQ
Sbjct: 192 ATLPSGIFDNNYNLFNLALHGNPWQCDCHLAYLSSWLRQYSDKLFNIQTYCAGPAYLKGQ 251
Query: 243 NILDIPEHEFKC 254
+ + E + C
Sbjct: 252 VVPALKEEQLVC 263
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPR--LGLYTKCFA 61
+L+ N L LP G+F + L L + N + CDCHL++L WL++Y + T C
Sbjct: 185 SLSRNLLATLPSGIFDNNYNLFNLALHGNPWQCDCHLAYLSSWLRQYSDKLFNIQTYCAG 244
Query: 62 PSHIKGQNILDIPEHEFKCSGPVEKP-TGECAAEPSCPHPCRCADGIVDCR 111
P+++KGQ + + E + C PV + G A P P D +V+ R
Sbjct: 245 PAYLKGQVVPALKEEQLVC--PVTRDRVGYQAPGPEDREPGDSWDLVVEDR 293
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%)
Query: 127 TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTY 186
T++ ++ L P AF LR ++++ + S ++ D F L SL LTLN + L
Sbjct: 62 TKVVFLNTQLSRLEPDAFGGLPGLRDLEVTGSAFSNLSADTFSHLASLGKLTLNFDLLEA 121
Query: 187 LPDGVFAELFRLRTLRISENSF 208
LP+ +F + L +L +S N+
Sbjct: 122 LPEDLFRHVGALHSLTLSHNAI 143
>gi|119585857|gb|EAW65453.1| leucine-rich repeats and immunoglobulin-like domains 1, isoform
CRA_b [Homo sapiens]
Length = 1120
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 112/258 (43%), Gaps = 18/258 (6%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L NN++ L DG F L ++ L + NS + + + L+ L +L L A H
Sbjct: 242 LQRNNISKLTDGAFWGLSKMHVLHLEYNSLV-EVNSGSLY-GLTALHQLHLSNNSIARIH 299
Query: 65 IKG----QNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
KG Q + ++ + E+ E ++ I + KGL + +
Sbjct: 300 RKGWSFCQKLHELVLSFNNLTRLDEESLAELSSLSVLRLSHNSISHIAEGAFKGLRSLRV 359
Query: 121 LLPEATTELRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSL 177
L L+ N+I+ E AF+ L ++ L N+I VA AF GL+ L L
Sbjct: 360 L--------DLDHNEISGTIEDTSGAFSGLDSLSKLTLFGNKIKSVAKRAFSGLEGLEHL 411
Query: 178 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAP 236
L N + + F ++ L+ L IS +SF+CDC L WL WL R + + C P
Sbjct: 412 NLGGNAIRSVQFDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLIGRMLQAFVTATCAHP 471
Query: 237 SHIKGQNILDIPEHEFKC 254
+KGQ+I +P F C
Sbjct: 472 ESLKGQSIFSVPPESFVC 489
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 133 QNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
+N IT+LP +AF RL ++DL++N+I + FQGL SL L L NN++ L DG F
Sbjct: 197 KNRITQLPVRAF-KLPRLTQLDLNRNRIRLIEGLTFQGLNSLEVLKLQRNNISKLTDGAF 255
Query: 193 AELFRLRTLRISENSFI 209
L ++ L + NS +
Sbjct: 256 WGLSKMHVLHLEYNSLV 272
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Query: 106 GIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAV 165
+DC +GL +P LP T L L N ++E+ P F + L+ + L+ N+++ AV
Sbjct: 50 DSLDCGGRGLAALPGDLPSWTRSLNLSYNKLSEIDPAGFEDLPNLQEVYLNNNELT--AV 107
Query: 166 DAFQGLKS-LTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ S + SL L +N + + L L +S N+
Sbjct: 108 PSLGAASSHVVSLFLQHNKIRSVEGSQLKAYLSLEVLDLSLNNI 151
>gi|76161924|gb|ABA40052.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 172
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 67/133 (50%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDCR K + VP +P L L N IT+L P F + +L +DL
Sbjct: 1 ACPSQCSCDQTTVDCRNKRFSSVPAGIPTDKQRLWLNNNQITKLEPGVFDSLMQLTYLDL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
+ NQ+ + F L L L LNNN L +P G F L L + + +N + C C +
Sbjct: 61 AVNQLQALPARVFDKLTQLNHLFLNNNQLKSIPRGAFDNLKSLTHIWLFDNPWDCACSDI 120
Query: 215 SWLHRWLKRYPRL 227
+L RW+ ++P +
Sbjct: 121 LYLSRWISQHPGI 133
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 44/118 (37%), Gaps = 18/118 (15%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTEL------TYMVSIDRVDKVLLYSYISN 347
+CP C C VDCR K + VP +P L + D ++ +Y+
Sbjct: 1 ACPSQCSCDQTTVDCRNKRFSSVPAGIPTDKQRLWLNNNQITKLEPGVFDSLMQLTYLD- 59
Query: 348 NFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + LP + F +L + L N + +P AF N K L +
Sbjct: 60 -----------LAVNQLQALPARVFDKLTQLNHLFLNNNQLKSIPRGAFDNLKSLTHI 106
>gi|70955577|gb|AAZ16350.1| variable lymphocyte receptor B [Eptatretus burgeri]
Length = 257
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 77/171 (45%), Gaps = 13/171 (7%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C KGL VP +P TT L L N + LP F +L + L
Sbjct: 23 ACPSRCSCSGTNVYCNSKGLTSVPTGIPAQTTYLDLGSNKLQSLPSGVFDKLTQLTYLSL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
S NQ+ + F L LT+L L+ N L +PDGVF L L+ + + N + C C +
Sbjct: 83 STNQLQSLHQGVFDKLTKLTALPLDTNQLKSVPDGVFDRLTSLQKIYLFSNPWDCTCPGI 142
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKI 265
+ W+ ++ S + + ++ KCSGS RS I
Sbjct: 143 RYFSEWINKH------------SGVVLDSSNNVNPDSAKCSGSGKPVRSII 181
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 45/113 (39%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V C KGL VP +P TT L + L S S F + T
Sbjct: 23 ACPSRCSCSGTNVYCNSKGLTSVPTGIPAQTTYL-------DLGSNKLQSLPSGVFDKLT 75
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L N + L F +L + L+ N + +P F L+++
Sbjct: 76 QLTYLSLSTNQLQSLHQGVFDKLTKLTALPLDTNQLKSVPDGVFDRLTSLQKI 128
>gi|426341126|ref|XP_004035904.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 1 [Gorilla gorilla gorilla]
Length = 1091
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 112/258 (43%), Gaps = 18/258 (6%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L NN++ L DG F L ++ L + NS + + + L+ L +L L A H
Sbjct: 242 LQRNNISKLTDGAFWGLSKMHVLHLEYNSLV-EVNSGSLY-GLTALHQLHLSNNSIARIH 299
Query: 65 IKG----QNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
KG Q + ++ + E+ E ++ I + KGL + +
Sbjct: 300 RKGWSFCQKLHELVLSFNNLTRLDEESLAELSSLSVLRLSHNSISHIAEGAFKGLRSLRV 359
Query: 121 LLPEATTELRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSL 177
L L+ N+I+ E AF+ L ++ L N+I VA AF GL+ L L
Sbjct: 360 L--------DLDHNEISGTIEDTSGAFSGLDGLSKLTLFGNKIKSVAKRAFSGLEGLEHL 411
Query: 178 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAP 236
L N + + F ++ L+ L IS +SF+CDC L WL WL R + + C P
Sbjct: 412 NLGGNAIRSVQFDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLIGRMLQAFVTATCAHP 471
Query: 237 SHIKGQNILDIPEHEFKC 254
+KGQ+I +P F C
Sbjct: 472 ESLKGQSIFSVPPESFVC 489
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 133 QNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
+N IT+LP +AF RL ++DL++N+I + FQGL SL L L NN++ L DG F
Sbjct: 197 KNRITQLPVRAF-KLPRLTQLDLNRNRIRLIEGLTFQGLNSLEVLKLQRNNISKLTDGAF 255
Query: 193 AELFRLRTLRISENSFI 209
L ++ L + NS +
Sbjct: 256 WGLSKMHVLHLEYNSLV 272
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Query: 106 GIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAV 165
+DC +GL +P LP T L L N ++E+ P F + L+ + L+ N+++ AV
Sbjct: 50 DSLDCGGRGLAALPGDLPSWTRSLNLSYNRLSEIDPAGFEDLPNLQEVYLNNNELT--AV 107
Query: 166 DAFQGLKS-LTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ S + SL L +N + + L L +S N+
Sbjct: 108 PSLGAASSHVVSLFLQHNKIRSVEGSQLKAYLSLEVLDLSLNNI 151
>gi|76161727|gb|ABA39960.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 171
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C + L VP +P T L L N IT+ P F + +L ++L
Sbjct: 1 ACPSQCSCSGTTVNCDSRSLASVPGGIPTTTQVLYLYDNQITKFEPGVFDSLTQLTVLNL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
+ NQ++ + V F L LT L LNNN L +P G F L L + + N + C C +
Sbjct: 61 AINQLTALPVGVFDKLTQLTYLDLNNNQLKSIPRGAFDNLKSLTHIWLYNNPWDCACSDI 120
Query: 215 SWLHRWLKRYPRL 227
+L RW+ ++P +
Sbjct: 121 LYLSRWISQHPGV 133
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C + L VP +P TT++ Y+ +++ K + F T
Sbjct: 1 ACPSQCSCSGTTVNCDSRSLASVPGGIP-TTTQVLYLYD-NQITK-----FEPGVFDSLT 53
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L N +T LP F +L + L N + +P AF N K L +
Sbjct: 54 QLTVLNLAINQLTALPVGVFDKLTQLTYLDLNNNQLKSIPRGAFDNLKSLTHI 106
>gi|410253542|gb|JAA14738.1| leucine-rich repeats and immunoglobulin-like domains 1 [Pan
troglodytes]
gi|410349701|gb|JAA41454.1| leucine-rich repeats and immunoglobulin-like domains 1 [Pan
troglodytes]
Length = 1091
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 112/258 (43%), Gaps = 18/258 (6%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L NN++ L DG F L ++ L + NS + + + L+ L +L L A H
Sbjct: 242 LQRNNISKLTDGAFWGLSKMHVLHLEYNSLV-EVNSGSLY-GLTALHQLHLSNNSIARIH 299
Query: 65 IKG----QNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
KG Q + ++ + E+ E ++ I + KGL + +
Sbjct: 300 RKGWSFCQKLHELVLSFNNLTRLDEESLAELSSLSVLRLSHNSISHIAEGAFKGLRSLRV 359
Query: 121 LLPEATTELRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSL 177
L L+ N+I+ E AF+ L ++ L N+I VA AF GL+ L L
Sbjct: 360 L--------DLDHNEISGTIEDTSGAFSGLDSLSKLTLFGNKIKSVAKRAFSGLEGLEHL 411
Query: 178 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAP 236
L N + + F ++ L+ L IS +SF+CDC L WL WL R + + C P
Sbjct: 412 NLGGNAIRSVQFDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLIGRMLQAFVTATCAHP 471
Query: 237 SHIKGQNILDIPEHEFKC 254
+KGQ+I +P F C
Sbjct: 472 ESLKGQSIFSVPPESFVC 489
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 133 QNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
+N IT+LP +AF RL ++DL++N+I + FQGL SL L L NN++ L DG F
Sbjct: 197 KNRITQLPVRAF-KLPRLTQLDLNRNRIRLIEGLTFQGLNSLEVLKLQRNNISKLTDGAF 255
Query: 193 AELFRLRTLRISENSFI 209
L ++ L + NS +
Sbjct: 256 WGLSKMHVLHLEYNSLV 272
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Query: 106 GIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAV 165
+DC +GL +P LP T L L N ++E+ P F + L+ + L+ N+++ AV
Sbjct: 50 DSLDCGGRGLAALPGDLPSWTRSLNLSYNKLSEIDPAGFEDLPNLQEVYLNNNELT--AV 107
Query: 166 DAFQGLKS-LTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ S + SL L +N + + L L +S N+
Sbjct: 108 PSLGAASSHVVSLFLQHNKIRSVEGNQLKAYLSLEVLDLSLNNI 151
>gi|296225613|ref|XP_002758576.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 1 isoform 1 [Callithrix jacchus]
Length = 1090
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 112/258 (43%), Gaps = 18/258 (6%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L NN++ L DG F L ++ L + NS + + + L+ L +L L A H
Sbjct: 242 LQRNNISKLTDGAFWGLSKMHVLHLEYNSLV-EVNSGSLY-GLTALQQLHLSNNSIARIH 299
Query: 65 IKG----QNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
KG Q + ++ + E+ E ++ I + KGL + +
Sbjct: 300 RKGWSFCQKLHELVLSFNNLTRLDEESLAELSSLSVLRLSHNSISHIAEGAFKGLKSLRV 359
Query: 121 LLPEATTELRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSL 177
L L+ N+I+ E AF+ L ++ L N+I VA AF GL+ L L
Sbjct: 360 L--------DLDHNEISGTIEDTSGAFSGLDSLSKLSLFGNKIKSVAKRAFSGLEGLEHL 411
Query: 178 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAP 236
L N + + F ++ L+ L IS +SF+CDC L WL WL + + + C P
Sbjct: 412 NLGGNAIRSVQFDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLMGKMLQAFVTATCAHP 471
Query: 237 SHIKGQNILDIPEHEFKC 254
+KGQ+I +P F C
Sbjct: 472 ESLKGQSIFSVPPESFVC 489
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 133 QNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
+N IT+LP +AF RL ++DL++N+I + FQGL SL L L NN++ L DG F
Sbjct: 197 KNRITQLPVRAF-KLPRLIQLDLNRNRIRLIEGLTFQGLNSLEVLKLQRNNISKLTDGAF 255
Query: 193 AELFRLRTLRISENSFI 209
L ++ L + NS +
Sbjct: 256 WGLSKMHVLHLEYNSLV 272
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 106 GIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAV 165
++DC +GL P LP T L L N ++E+ P F + L+ + L+ N+++ AV
Sbjct: 50 DLLDCGGRGLAAQPGDLPSWTRSLNLSYNKLSEIDPAGFEDLLNLQEVYLNNNELT--AV 107
Query: 166 DAFQGLKS-LTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ S + SL L +N + + V L L +S N+
Sbjct: 108 PSLGAASSHVISLFLQHNKIRRVEGSVLKAYVSLEVLDLSSNNI 151
>gi|345307008|ref|XP_001511854.2| PREDICTED: carboxypeptidase N subunit 2-like [Ornithorhynchus
anatinus]
Length = 781
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 126/295 (42%), Gaps = 23/295 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFI-----CDCHLSWL-HRWLKRYPRLGLYTK 58
L++NN++ LP VF L RL+ L + N + LS L H WL+ L
Sbjct: 200 LSDNNISALPRRVFWTLARLQELFLDSNGILELSPDIFSKLSQLQHLWLQNNSITHLPRS 259
Query: 59 CFAPSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKV 118
F+ ++ L + ++ + + P G P+ + + E +
Sbjct: 260 IFSLGNL---TFLSLERNQLQ-----QVPAGLLGQTPNLERLSLSHNRLETLDEGTFRNL 311
Query: 119 PILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLT 178
L + + L N ++ LP F + + + L N ++ + D FQ L SL L+
Sbjct: 312 SKL-----STVELSHNLLSGLPAGIFQDLAAVTELYLGSNNLTSLHRDLFQNLTSLGKLS 366
Query: 179 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGL---YTKCFA 235
L NN L LP G+F ++L L + N + CDCHL++L +L+ + G+ C +
Sbjct: 367 LPNNRLETLPKGIFDSNYKLSNLALRGNPWACDCHLTYLLDYLQTFME-GMPDSQGSCNS 425
Query: 236 PSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECA 290
P+H+ +L + + C ++ E R + E P++ P +K G C
Sbjct: 426 PAHLNDSELLRLRVDQLVCPLTAGEARLHFSQSEKQALGGPWDPTPGDKTPGSCT 480
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 54/112 (48%)
Query: 97 CPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLS 156
CP C C D V C +K + +P +P T ++ + + ++ +AF++ L ++
Sbjct: 22 CPEACICFDQTVFCSDKEITYIPQNIPPGTLKIIFVETTMCKVESRAFSHTTSLCKVVFL 81
Query: 157 KNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
++ + DAF GL L L + + L +L F+ L LR L ++ NS
Sbjct: 82 NTKLRTLEQDAFGGLPRLRDLEITGSPLGHLRAQTFSNLTSLRKLTLNFNSL 133
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L+L N+I+ LP + F RL+ + L N I +++ D F L L L L NN++T+LP
Sbjct: 198 LKLSDNNISALPRRVFWTLARLQELFLDSNGILELSPDIFSKLSQLQHLWLQNNSITHLP 257
Query: 189 DGVFA 193
+F+
Sbjct: 258 RSIFS 262
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L L N +T L F + L + L N + F L SL +L L N L +
Sbjct: 125 KLTLNFNSLTSLEAGTFEGMETLEELHLKGNGFQNLMEGFFHPLTSLKTLNLAQNRLAQI 184
Query: 188 PDGVFAELFRLRTLRISENSF 208
P+ +FA L LR L++S+N+
Sbjct: 185 PERLFAPLVHLRILKLSDNNI 205
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGL---YTKCF 60
+L NN L LP G+F ++L L + N + CDCHL++L +L+ + G+ C
Sbjct: 366 SLPNNRLETLPKGIFDSNYKLSNLALRGNPWACDCHLTYLLDYLQTFME-GMPDSQGSCN 424
Query: 61 APSHIKGQNILDIPEHEFKC 80
+P+H+ +L + + C
Sbjct: 425 SPAHLNDSELLRLRVDQLVC 444
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 51/113 (45%), Gaps = 10/113 (8%)
Query: 295 CPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR--W 352
CP C C D V C +K + +P +P T ++ ++ + + +S+ ++ K
Sbjct: 22 CPEACICFDQTVFCSDKEITYIPQNIPPGTLKIIFVETTMCKVESRAFSHTTSLCKVVFL 81
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ R LEQ+ AF RLR + + + + L + F+N LR++
Sbjct: 82 NTKLRTLEQD--------AFGGLPRLRDLEITGSPLGHLRAQTFSNLTSLRKL 126
>gi|332817259|ref|XP_516568.3| PREDICTED: leucine-rich repeats and immunoglobulin-like domains 1
[Pan troglodytes]
Length = 1100
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 112/258 (43%), Gaps = 18/258 (6%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L NN++ L DG F L ++ L + NS + + + L+ L +L L A H
Sbjct: 251 LQRNNISKLTDGAFWGLSKMHVLHLEYNSLV-EVNSGSLY-GLTALHQLHLSNNSIARIH 308
Query: 65 IKG----QNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
KG Q + ++ + E+ E ++ I + KGL + +
Sbjct: 309 RKGWSFCQKLHELVLSFNNLTRLDEESLAELSSLSVLRLSHNSISHIAEGAFKGLRSLRV 368
Query: 121 LLPEATTELRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSL 177
L L+ N+I+ E AF+ L ++ L N+I VA AF GL+ L L
Sbjct: 369 L--------DLDHNEISGTIEDTSGAFSGLDSLSKLTLFGNKIKSVAKRAFSGLEGLEHL 420
Query: 178 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAP 236
L N + + F ++ L+ L IS +SF+CDC L WL WL R + + C P
Sbjct: 421 NLGGNAIRSVQFDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLIGRMLQAFVTATCAHP 480
Query: 237 SHIKGQNILDIPEHEFKC 254
+KGQ+I +P F C
Sbjct: 481 ESLKGQSIFSVPPESFVC 498
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 133 QNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
+N IT+LP +AF RL ++DL++N+I + FQGL SL L L NN++ L DG F
Sbjct: 206 KNRITQLPVRAF-KLPRLTQLDLNRNRIRLIEGLTFQGLNSLEVLKLQRNNISKLTDGAF 264
Query: 193 AELFRLRTLRISENSFI 209
L ++ L + NS +
Sbjct: 265 WGLSKMHVLHLEYNSLV 281
>gi|76161791|gb|ABA39992.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 169
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 13/169 (7%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC K L VP +P T L L N IT+L P F + L+ +
Sbjct: 1 ACPSQCSCSGTTVDCSGKSLASVPTGIPTTTQVLYLHVNQITKLEPGVFDHVINLKELYF 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
S NQ++ + F L LT L L+ N L +P G F L L + + N + C C +
Sbjct: 61 SNNQLTSLPARCFDKLPKLTHLVLHTNQLKSVPRGAFDNLKSLTHIYLFNNPWDCACSDI 120
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L RW+ ++P + + N+ ++ +CSG++ R+
Sbjct: 121 LYLSRWISQHPGVVM------------DNLNNVDPDSARCSGTNTPVRA 157
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKV--LLYSYISNNFKR 351
+CP C C+ VDC K L VP +P TT++ Y+ ++++ K+ ++ ++ N +
Sbjct: 1 ACPSQCSCSGTTVDCSGKSLASVPTGIP-TTTQVLYL-HVNQITKLEPGVFDHVINLKEL 58
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ N +T LP + F +L + L N + +P AF N K L +
Sbjct: 59 Y------FSNNQLTSLPARCFDKLPKLTHLVLHTNQLKSVPRGAFDNLKSLTHI 106
>gi|253401334|gb|ACT31444.1| variable lymphocyte receptor B diversity region [Petromyzon
marinus]
Length = 169
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 77/169 (45%), Gaps = 13/169 (7%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C V C E+ L VP +P T L L N IT+L P F L++I+L
Sbjct: 1 ACPSQCSCDQTTVYCHERRLASVPAGIPTTTRVLYLNDNQITKLEPGVFDRLGNLQQINL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
S NQ+S + F L LT L L+ N L +P G F L L + + N + C C +
Sbjct: 61 SNNQLSALPAGVFDKLPKLTHLVLHTNQLKSIPRGAFDNLKSLTHIWLLNNPWDCQCTDI 120
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L W+ ++ S I G+ + KCSG++ R+
Sbjct: 121 LYLSGWVAQH------------SGIVGEGWWTVNPDNVKCSGTNTPVRA 157
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C V C E+ L VP +P TT + Y+ + +++ K+ F R
Sbjct: 1 ACPSQCSCDQTTVYCHERRLASVPAGIP-TTTRVLYL-NDNQITKLE-----PGVFDRLG 53
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N + L N ++ LP F +L + L N + +P AF N K L +
Sbjct: 54 NLQQINLSNNQLSALPAGVFDKLPKLTHLVLHTNQLKSIPRGAFDNLKSLTHI 106
>gi|81175396|gb|ABB59037.1| variable lymphocyte receptor B [Eptatretus stoutii]
Length = 284
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 80/189 (42%), Gaps = 24/189 (12%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C+ K L VP +P +TT L L QN + LP F +L+ + L
Sbjct: 23 ACPSRCSCSGTTVSCKSKSLTSVPSGIPSSTTILYLHQNQLQSLPSGVFDELTQLKELSL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF------I 209
S+NQ+ + F L LT +L+ N L LP GVF +L +L+ L + N I
Sbjct: 83 SQNQLQSLPSGVFDKLTQLTIFSLSTNQLQSLPHGVFDKLTQLKELYLHTNQLKSVPDGI 142
Query: 210 CDCHLSWLHRWLKRYPRLGLYTKCFAPSH-------------IKGQNILDIPEHEFKCSG 256
D S H WL P C P +K ++ KCSG
Sbjct: 143 FDRLTSLQHIWLSDNPW-----DCSCPGSDYLSRWIQKNSAIVKAKSSWSSDPDSAKCSG 197
Query: 257 SSMETRSKI 265
S RS I
Sbjct: 198 SGKPVRSII 206
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 46/113 (40%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V C+ K L VP +P +TT L + + L S S F T
Sbjct: 23 ACPSRCSCSGTTVSCKSKSLTSVPSGIPSSTTIL-------YLHQNQLQSLPSGVFDELT 75
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L QN + LP F +L L N + LP F +L+ +
Sbjct: 76 QLKELSLSQNQLQSLPSGVFDKLTQLTIFSLSTNQLQSLPHGVFDKLTQLKEL 128
>gi|344282163|ref|XP_003412844.1| PREDICTED: carboxypeptidase N subunit 2-like [Loxodonta africana]
Length = 547
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 125/286 (43%), Gaps = 46/286 (16%)
Query: 3 RTLN--NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCF 60
RTLN N LT LP+ +F L L+TL++S N+ LS L + + + +LG + F
Sbjct: 172 RTLNLAQNLLTQLPEKLFDRLVSLQTLKLSNNA------LSGLRQGV--FDKLGSLQELF 223
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADG---IVDCREKGLNK 117
+ G +I + F +EK + A P + G ++ + L
Sbjct: 224 ----LDGNSISQLHPQVFSELPCLEKLWLQHNAIEHLPLTIFSSLGKLTFLNLQHNALRT 279
Query: 118 VPILLPEATTEL--------RLEQ-------------------NDITELPPKAFANYKRL 150
+P L T L +LE N IT LP F + K L
Sbjct: 280 LPAGLFAQTPGLVGLSLSHNQLETIAEGTFANLSSLSSLTLSYNAITHLPVGIFRDLKEL 339
Query: 151 RRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFIC 210
R+ L N ++ + FQ L + L+L N LT LP+G+F + L L + N + C
Sbjct: 340 VRLYLGSNNLTALHPALFQNLSKVEQLSLTKNLLTTLPEGIFDTNYNLFNLALHGNPWQC 399
Query: 211 DCHLSWLHRWLKRYP--RLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
DCHL++L WL++Y + T C P+++KGQ + + E + C
Sbjct: 400 DCHLAYLFSWLRQYSDRHFNMQTYCAGPAYLKGQAVPALEEKQLVC 445
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 54/136 (39%), Gaps = 24/136 (17%)
Query: 97 CPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDIT------------------- 137
CP C C V C ++G+ VP+ +P T + + +
Sbjct: 22 CPKGCDCIIQDVFCSDEGMAAVPLDIPPHATNIVFVETSFSTVGTRAFSGSPNLTKVVFL 81
Query: 138 -----ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
P AF RL ++++ + S ++ F L SLT TLN N L LP+ +F
Sbjct: 82 STQLCHFGPDAFGGLPRLEDLEITGSAFSNISAHIFSNLASLTKFTLNFNKLEALPEVLF 141
Query: 193 AELFRLRTLRISENSF 208
+ L +L++ N
Sbjct: 142 QHMEALDSLQLQGNQL 157
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 49/85 (57%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
EA L+L+ N + LP + F RLR ++L++N ++++ F L SL +L L+NN
Sbjct: 145 EALDSLQLQGNQLQTLPRRLFHPLGRLRTLNLAQNLLTQLPEKLFDRLVSLQTLKLSNNA 204
Query: 184 LTYLPDGVFAELFRLRTLRISENSF 208
L+ L GVF +L L+ L + NS
Sbjct: 205 LSGLRQGVFDKLGSLQELFLDGNSI 229
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 118/280 (42%), Gaps = 38/280 (13%)
Query: 127 TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTY 186
T+ L N + LP F + + L + L NQ+ + F L L +L L N LT
Sbjct: 124 TKFTLNFNKLEALPEVLFQHMEALDSLQLQGNQLQTLPRRLFHPLGRLRTLNLAQNLLTQ 183
Query: 187 LPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILD 246
LP+ +F L L+TL++S N+ LS L + + + +LG + F + G +I
Sbjct: 184 LPEKLFDRLVSLQTLKLSNNA------LSGLRQGV--FDKLGSLQELF----LDGNSISQ 231
Query: 247 IPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIV 306
+ F S + K++ + + + P + G+ +
Sbjct: 232 LHPQVF----SELPCLEKLWLQHNAIEHLPLT---IFSSLGKLT--------------FL 270
Query: 307 DCREKGLNKVPILLPEATTELTYM-VSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
+ + L +P L T L + +S ++++ + ++ + + + S L N IT
Sbjct: 271 NLQHNALRTLPAGLFAQTPGLVGLSLSHNQLETIAEGTFANLS----SLSSLTLSYNAIT 326
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
LP F + K L R+ L N++T L P F N ++ ++
Sbjct: 327 HLPVGIFRDLKELVRLYLGSNNLTALHPALFQNLSKVEQL 366
>gi|301770779|ref|XP_002920808.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeats and
immunoglobulin-like domains protein 1-like [Ailuropoda
melanoleuca]
Length = 1100
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 111/268 (41%), Gaps = 38/268 (14%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L NN++ L DG F L R+ L + NS + + WL+ GL H
Sbjct: 240 LQRNNISKLTDGAFWGLSRIHVLHLEYNS-LAEVSRGWLY---------GL--SALHQLH 287
Query: 65 IKGQNILDIPE---------HEFKCSGP-----VEKPTGECAAEPSCPHPCRCADGIVDC 110
+ G +I I HE S E+ + ++ + I +
Sbjct: 288 LSGNSITRINREGWGFCPKLHELVLSFNNLTRLDEESLADLSSLSTLRLSHNSISHIAEG 347
Query: 111 REKGLNKVPILLPEATTELRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
KGL + +L L+ N+I+ E AF L ++ L N+I VA A
Sbjct: 348 AFKGLKHLRVL--------DLDHNEISGTIEDTSGAFTGLDSLSKLTLFGNKIKSVAKRA 399
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPR 226
F GL+ L L L N + + FA++ LR L IS +SF+CDC L WL WL R +
Sbjct: 400 FSGLEGLEHLDLGENAIRSVQSDAFAKMKYLRELHISSDSFLCDCQLKWLPPWLVGRTLQ 459
Query: 227 LGLYTKCFAPSHIKGQNILDIPEHEFKC 254
+ C P +KGQ+I +P F C
Sbjct: 460 AFVTATCAHPESLKGQSIFSVPPESFVC 487
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
LRL +N IT+LP KAF RL ++DL++N+I + FQGL SL L L NN++ L
Sbjct: 191 LRLSKNRITQLPMKAF-KLPRLTQLDLNRNRIRVIEGLTFQGLDSLEVLKLQRNNISKLT 249
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLH 218
DG F L R+ L + NS + + WL+
Sbjct: 250 DGAFWGLSRIHVLHLEYNS-LAEVSRGWLY 278
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 56/135 (41%), Gaps = 23/135 (17%)
Query: 95 PSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRID 154
P C C CA +DC +GL +P LP T L L N ++E+ P F + L+ +
Sbjct: 37 PPCAAACTCAGDSLDCGGRGLVALPGDLPAWTRSLNLSYNKLSEIDPAGFEDLPNLQEVY 96
Query: 155 LSK-----------------------NQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGV 191
L+ NQI V Q SL L L++NN+T + +
Sbjct: 97 LNNNELTAVPSLGAVASHIVSLFLQHNQIRSVEGSQLQAYLSLEVLDLSSNNITEIRNTC 156
Query: 192 FAELFRLRTLRISEN 206
F RL+ L ++ N
Sbjct: 157 FPHGLRLKELNLASN 171
Score = 44.7 bits (104), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL-KSLTSLTLNNNNLTYL 187
L L N+ITE+ F + RL+ ++L+ N+I + AF GL +SL L L+ N +T L
Sbjct: 142 LDLSSNNITEIRNTCFPHGLRLKELNLASNRIGTLESGAFDGLSRSLVMLRLSKNRITQL 201
Query: 188 PDGVFAELFRLRTLRISEN 206
P F +L RL L ++ N
Sbjct: 202 PMKAF-KLPRLTQLDLNRN 219
>gi|52355222|gb|AAU44786.1| leucine-rich repeat protein LRIG1 [Homo sapiens]
Length = 1093
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 133 QNDITELPPKAFANYKRLRRIDLSKNQISKVAVD---AFQGLKSLTSLTLNNNNLTYLPD 189
N I+ + AF + LR +DL N+IS D AF GL SL+ L L N + +
Sbjct: 364 HNSISHIAEGAFKGLRSLRVLDLDHNEISGTIEDTSGAFSGLDSLSKLNLGGNAIRSVQF 423
Query: 190 GVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAPSHIKGQNILDIP 248
F ++ L+ L IS +SF+CDC L WL WL R + + C P +KGQ+I +P
Sbjct: 424 DAFVKMKNLKELHISSDSFLCDCQLKWLPPWLIGRMLQAFVTATCAHPESLKGQSIFSVP 483
Query: 249 EHEFKC 254
F C
Sbjct: 484 PESFVC 489
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%)
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
+DC +GL +P LP T L L N ++E+ P F + L+ ++LS N++S++
Sbjct: 52 LDCGGRGLAALPGDLPSWTRSLNLSYNKLSEIDPAGFEDLPNLQEVNLSYNKLSEIDPAG 111
Query: 168 FQGLKSLTSLTLNNNNLTYLP 188
F+ L +L + LNNN LT +P
Sbjct: 112 FEDLPNLQEVYLNNNELTAVP 132
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 133 QNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
+N IT+LP +AF RL ++DL++N+I + FQGL SL L L NN++ L DG F
Sbjct: 221 KNRITQLPVRAF-KLPRLTQLDLNRNRIRLIEGLTFQGLNSLEVLKLQRNNISKLTDGAF 279
Query: 193 AELFRLRTLRISENSFI 209
L ++ L + NS +
Sbjct: 280 WGLSKMHVLHLEYNSLV 296
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAPS 63
L N + + F ++ L+ L IS +SF+CDC L WL WL R + + C P
Sbjct: 413 LGGNAIRSVQFDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLIGRMLQAFVTATCAHPE 472
Query: 64 HIKGQNILDIPEHEFKC 80
+KGQ+I +P F C
Sbjct: 473 SLKGQSIFSVPPESFVC 489
>gi|403298936|ref|XP_003940254.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 1 isoform 2 [Saimiri boliviensis boliviensis]
Length = 1091
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 133 QNDITELPPKAFANYKRLRRIDLSKNQISKVAVD---AFQGLKSLTSLTLNNNNLTYLPD 189
N I+ + AF K LR +DL N+IS D AF GL SL+ L L N + +
Sbjct: 365 HNSISHIAEGAFKGLKSLRVLDLDHNEISGTIEDTSGAFSGLDSLSKLNLGGNAIRSVQF 424
Query: 190 GVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAPSHIKGQNILDIP 248
F ++ L+ L +S +SF+CDC L WL WL R + + C P +KGQ+I +P
Sbjct: 425 DAFVKMKNLKELHMSSDSFLCDCQLKWLPPWLIGRMLQAFVTATCAHPESLKGQSIFSVP 484
Query: 249 EHEFKC 254
F C
Sbjct: 485 PESFVC 490
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%)
Query: 85 EKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAF 144
E T C C C +DC +GL +P LP T L LE ++ + PK +
Sbjct: 30 EPVTAAAGPRAPCAAACTCTGDSLDCGGRGLAALPGDLPSWTRSLNLEWELLSPIEPKDY 89
Query: 145 ANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
N + I+LS N++S++ F+ L +L + LNNN LT +P
Sbjct: 90 QNLYNIFEINLSYNRLSEIDPAGFEDLLNLQEVYLNNNELTAVP 133
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 133 QNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
+N IT+LP +AF RL ++DL++N+I + FQGL SL L L NN++ L DG F
Sbjct: 222 KNRITQLPVRAF-KLPRLTQLDLNRNRIRLIEGLTFQGLNSLEVLKLQRNNISKLTDGAF 280
Query: 193 AELFRLRTLRISENSFI 209
L ++ L + NS +
Sbjct: 281 WGLSKMHVLHLEYNSLV 297
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAPS 63
L N + + F ++ L+ L +S +SF+CDC L WL WL R + + C P
Sbjct: 414 LGGNAIRSVQFDAFVKMKNLKELHMSSDSFLCDCQLKWLPPWLIGRMLQAFVTATCAHPE 473
Query: 64 HIKGQNILDIPEHEFKC 80
+KGQ+I +P F C
Sbjct: 474 SLKGQSIFSVPPESFVC 490
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 46/120 (38%), Gaps = 14/120 (11%)
Query: 283 EKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELT----YMVSIDRVDK 338
E T C C C +DC +GL +P LP T L + I+ D
Sbjct: 30 EPVTAAAGPRAPCAAACTCTGDSLDCGGRGLAALPGDLPSWTRSLNLEWELLSPIEPKDY 89
Query: 339 VLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFAN 398
LY+ N L N ++E+ P F + L+ + L N++T +P A+
Sbjct: 90 QNLYNIFEIN----------LSYNRLSEIDPAGFEDLLNLQEVYLNNNELTAVPSLGAAS 139
>gi|76162410|gb|ABA40269.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 172
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 81/172 (47%), Gaps = 16/172 (9%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDCR K VP +P T L L N IT+L P F L+R+ L
Sbjct: 1 ACPSQCSCSGTTVDCRSKRHASVPAGIPTTTQYLYLLVNQITKLEPGVFDRLVNLQRLWL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
+ NQ++ + V F L LT L L+ N L +PDG FA L L + + N + C C +
Sbjct: 61 NNNQLTSLPVGVFDKLTKLTHLDLHINQLKSIPDGAFARLPSLTHVWLHTNPWDCQCTDI 120
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL---DIPEHEFKCSGSSMETRS 263
+L W+ ++ S I G+ L + KCSG++ R+
Sbjct: 121 LYLSGWVAQH------------SGIVGEGWLRSWTVKPDNAKCSGTNTPVRA 160
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ VDCR K VP +P TT+ Y++ ++++ K+ F R
Sbjct: 1 ACPSQCSCSGTTVDCRSKRHASVPAGIP-TTTQYLYLL-VNQITKLE-----PGVFDRLV 53
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R L N +T LP F +L + L N + +P AFA L +
Sbjct: 54 NLQRLWLNNNQLTSLPVGVFDKLTKLTHLDLHINQLKSIPDGAFARLPSLTHV 106
>gi|355559520|gb|EHH16248.1| hypothetical protein EGK_11507, partial [Macaca mulatta]
Length = 1015
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 111/258 (43%), Gaps = 18/258 (6%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L NN++ L DG F L ++ L + NS + + + L+ L +L L A H
Sbjct: 169 LQRNNISKLTDGAFWGLSKMHVLHLEYNSLV-EVNSGSLY-GLTALHQLHLSNNSIARIH 226
Query: 65 IKG----QNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
KG Q + ++ + E+ E ++ I + KGL + +
Sbjct: 227 RKGWSFCQKLHELVLSFNNLTRLDEESLAELSSLSVLRLSHNSISHIAEGAFKGLRSLRV 286
Query: 121 LLPEATTELRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSL 177
L L+ N+I E AF+ L ++ L N+I VA AF GL+ L L
Sbjct: 287 L--------DLDHNEIAGTIEDTSGAFSGLDSLSKLTLFGNKIKSVAKRAFSGLEGLEHL 338
Query: 178 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAP 236
L N + + F ++ L+ L IS +SF+CDC L WL WL R + + C P
Sbjct: 339 NLGGNAIRSVQFDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLMGRMLQAFVTATCAHP 398
Query: 237 SHIKGQNILDIPEHEFKC 254
+KGQ+I +P F C
Sbjct: 399 ESLKGQSIFSVPPESFVC 416
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 133 QNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
+N IT+LP +AF RL ++DL++N+I + FQGL SL L L NN++ L DG F
Sbjct: 124 KNRITQLPVRAF-KLPRLTQLDLNRNRIRLIEGLTFQGLNSLEVLKLQRNNISKLTDGAF 182
Query: 193 AELFRLRTLRISENSFI 209
L ++ L + NS +
Sbjct: 183 WGLSKMHVLHLEYNSLV 199
>gi|296225617|ref|XP_002758578.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 1 isoform 3 [Callithrix jacchus]
Length = 1090
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 133 QNDITELPPKAFANYKRLRRIDLSKNQISKVAVD---AFQGLKSLTSLTLNNNNLTYLPD 189
N I+ + AF K LR +DL N+IS D AF GL SL+ L L N + +
Sbjct: 364 HNSISHIAEGAFKGLKSLRVLDLDHNEISGTIEDTSGAFSGLDSLSKLNLGGNAIRSVQF 423
Query: 190 GVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAPSHIKGQNILDIP 248
F ++ L+ L IS +SF+CDC L WL WL + + + C P +KGQ+I +P
Sbjct: 424 DAFVKMKNLKELHISSDSFLCDCQLKWLPPWLMGKMLQAFVTATCAHPESLKGQSIFSVP 483
Query: 249 EHEFKC 254
F C
Sbjct: 484 PESFVC 489
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 133 QNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
+N IT+LP +AF RL ++DL++N+I + FQGL SL L L NN++ L DG F
Sbjct: 221 KNRITQLPVRAF-KLPRLIQLDLNRNRIRLIEGLTFQGLNSLEVLKLQRNNISKLTDGAF 279
Query: 193 AELFRLRTLRISENSFI 209
L ++ L + NS +
Sbjct: 280 WGLSKMHVLHLEYNSLV 296
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAPS 63
L N + + F ++ L+ L IS +SF+CDC L WL WL + + + C P
Sbjct: 413 LGGNAIRSVQFDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLMGKMLQAFVTATCAHPE 472
Query: 64 HIKGQNILDIPEHEFKC 80
+KGQ+I +P F C
Sbjct: 473 SLKGQSIFSVPPESFVC 489
>gi|449283303|gb|EMC89980.1| Chondroadherin-like protein, partial [Columba livia]
Length = 483
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 92/213 (43%), Gaps = 12/213 (5%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L N L LP A RL + + N +C C L HRWL R R+ + C AP
Sbjct: 70 LRENQLQGLPP--LAGARRLERVSLVGNPLLCSCLLRPFHRWLARV-RVQVEGACAAPLA 126
Query: 65 IKGQNILDIPEHEFKC--SGPVEKPT-----GECAAEPSCPHPCRCADGI--VDCREKGL 115
++G+ + + E +C S P PT A+ CP C C+ C + L
Sbjct: 127 LRGRPLDSLRPPEMRCGRSQPTPSPTMPSEQSRVASSGHCPLGCSCSPDFHHGSCENRDL 186
Query: 116 NKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLT 175
++P P T L L QN +PP AF K L + L I + A QGL+SL
Sbjct: 187 QEIPQGFPRDTRLLDLRQNAFGTVPPGAFPGLKELVSLHLQSCSIRTLHPGALQGLESLV 246
Query: 176 SLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
L L +N+L+ L F +L L + N+F
Sbjct: 247 YLYLTDNHLSTLAATAFKGAPQLAYLDLDRNAF 279
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 122/323 (37%), Gaps = 63/323 (19%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ T L L N IT + +A A L+ + L + VA DAF L +L L N
Sbjct: 16 DGATWLDLGHNPITYMAEEALA-MASLKHLFLDHAALQDVAPDAFTHSPQLRTLDLRENQ 74
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
L LP A RL + + N +C C L HRWL R R+ + C AP ++G+
Sbjct: 75 LQGLPP--LAGARRLERVSLVGNPLLCSCLLRPFHRWLARV-RVQVEGACAAPLALRGRP 131
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREE---------------CSTDFHPYNSCP----VEK 284
+ + E +C G S T S E CS DFH + SC E
Sbjct: 132 LDSLRPPEMRC-GRSQPTPSPTMPSEQSRVASSGHCPLGCSCSPDFH-HGSCENRDLQEI 189
Query: 285 PTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVD------- 337
P G P R ++D R+ VP P A L +VS+
Sbjct: 190 PQG-------FPRDTR----LLDLRQNAFGTVP---PGAFPGLKELVSLHLQSCSIRTLH 235
Query: 338 -------KVLLYSYISNN---------FKRWTNRSR-RLEQNDITELPPKAFANYKRLRR 380
+ L+Y Y+++N FK + L++N T LP F L
Sbjct: 236 PGALQGLESLVYLYLTDNHLSTLAATAFKGAPQLAYLDLDRNAFTHLPSHTFQLLPNLIS 295
Query: 381 IRLEQNDITELPPKAFANYKRLR 403
+ L+ N I EL A LR
Sbjct: 296 LHLQHNAIGELVDSDLARAGGLR 318
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 25/141 (17%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL-KSLTSLTLNNNNLTY 186
+L LE N + E+P A L + LS+N I ++ AF + SL L L+N L +
Sbjct: 343 KLHLEANHLAEVPTAALQGLPALSELKLSRNPIKRLGDGAFLPVASSLQHLYLDNMGLEW 402
Query: 187 LPDGVFAELF-RLRTLRISENS----------------------FICDCHLSWLHRWLKR 223
+ G FA L ++R+L + N F CDC L L RW+
Sbjct: 403 ISPGAFAGLGPKIRSLYLESNKMSNIPDMSNFTGLEILNLRDVPFHCDCQLLPLWRWINT 462
Query: 224 YPRLGLYTKCFAPSHIKGQNI 244
L + C +P+ +G +
Sbjct: 463 L-NLHIGATCGSPAEAQGLKV 482
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N I + P A A K L ++ L N +++V A QGL +L+ L L+ N + L
Sbjct: 320 LYLAGNAIQHIAPTALAPAKMLEKLHLEANHLAEVPTAALQGLPALSELKLSRNPIKRLG 379
Query: 189 DGVF 192
DG F
Sbjct: 380 DGAF 383
>gi|403298934|ref|XP_003940253.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 1 isoform 1 [Saimiri boliviensis boliviensis]
Length = 1091
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 112/258 (43%), Gaps = 18/258 (6%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L NN++ L DG F L ++ L + NS + + + L+ L +L L A H
Sbjct: 243 LQRNNISKLTDGAFWGLSKMHVLHLEYNSLV-EVNSGSLYG-LTALQQLHLSNNSIARIH 300
Query: 65 IKG----QNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
KG Q + ++ + E+ E ++ I + KGL + +
Sbjct: 301 RKGWSFCQKLHELVLSFNNLTRLDEESLAELSSLSVLRLSHNSISHIAEGAFKGLKSLRV 360
Query: 121 LLPEATTELRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSL 177
L L+ N+I+ E AF+ L ++ L N+I VA AF GL+ L L
Sbjct: 361 L--------DLDHNEISGTIEDTSGAFSGLDSLSKLSLFGNKIKSVAKRAFSGLEGLEHL 412
Query: 178 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAP 236
L N + + F ++ L+ L +S +SF+CDC L WL WL R + + C P
Sbjct: 413 NLGGNAIRSVQFDAFVKMKNLKELHMSSDSFLCDCQLKWLPPWLIGRMLQAFVTATCAHP 472
Query: 237 SHIKGQNILDIPEHEFKC 254
+KGQ+I +P F C
Sbjct: 473 ESLKGQSIFSVPPESFVC 490
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 133 QNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
+N IT+LP +AF RL ++DL++N+I + FQGL SL L L NN++ L DG F
Sbjct: 198 KNRITQLPVRAF-KLPRLTQLDLNRNRIRLIEGLTFQGLNSLEVLKLQRNNISKLTDGAF 256
Query: 193 AELFRLRTLRISENSFI 209
L ++ L + NS +
Sbjct: 257 WGLSKMHVLHLEYNSLV 273
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 3/125 (2%)
Query: 85 EKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAF 144
E T C C C +DC +GL +P LP T L L N ++E+ P F
Sbjct: 30 EPVTAAAGPRAPCAAACTCTGDSLDCGGRGLAALPGDLPSWTRSLNLSYNRLSEIDPAGF 89
Query: 145 ANYKRLRRIDLSKNQISKVAVDAFQGLKS-LTSLTLNNNNLTYLPDGVFAELFRLRTLRI 203
+ L+ + L+ N+++ AV + S + SL L +N + + + L L +
Sbjct: 90 EDLLNLQEVYLNNNELT--AVPSLGAASSHVVSLFLQHNKIRSVEGSMLKAYVSLEVLDM 147
Query: 204 SENSF 208
S N+
Sbjct: 148 SSNNI 152
>gi|297285451|ref|XP_002802785.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains 1
isoform 2 [Macaca mulatta]
Length = 1088
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 111/258 (43%), Gaps = 18/258 (6%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L NN++ L DG F L ++ L + NS + + + L+ L +L L A H
Sbjct: 242 LQRNNISKLTDGAFWGLSKMHVLHLEYNSLV-EVNSGSLY-GLTALHQLHLSNNSIARIH 299
Query: 65 IKG----QNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
KG Q + ++ + E+ E ++ I + KGL + +
Sbjct: 300 RKGWSFCQKLHELVLSFNNLTRLDEESLAELSSLSVLRLSHNSISHIAEGAFKGLRSLRV 359
Query: 121 LLPEATTELRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSL 177
L L+ N+I E AF+ L ++ L N+I VA AF GL+ L L
Sbjct: 360 L--------DLDHNEIAGTIEDTSGAFSGLDSLSKLTLFGNKIKSVAKRAFSGLEGLEHL 411
Query: 178 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAP 236
L N + + F ++ L+ L IS +SF+CDC L WL WL R + + C P
Sbjct: 412 NLGGNAIRSVQFDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLMGRMLQAFVTATCAHP 471
Query: 237 SHIKGQNILDIPEHEFKC 254
+KGQ+I +P F C
Sbjct: 472 ESLKGQSIFSVPPESFVC 489
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 133 QNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
+N IT+LP +AF RL ++DL++N+I + FQGL SL L L NN++ L DG F
Sbjct: 197 KNRITQLPVRAF-KLPRLTQLDLNRNRIRLIEGLTFQGLNSLEVLKLQRNNISKLTDGAF 255
Query: 193 AELFRLRTLRISENSFI 209
L ++ L + NS +
Sbjct: 256 WGLSKMHVLHLEYNSLV 272
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Query: 106 GIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAV 165
VDC +GL +P LP T L L N ++E+ P F + L+ + L+ N+++ A+
Sbjct: 50 DSVDCGGRGLAALPGDLPAWTRSLNLSYNKLSEIDPAGFEDLPNLQEVYLNNNELT--AI 107
Query: 166 DAFQGLKS-LTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ S + SL L +N + + L L +S N+
Sbjct: 108 PSLGAASSHVVSLFLQHNKIRSVEGSQLKAYLSLEVLDLSSNNI 151
>gi|50086745|gb|AAT70253.1| variable lymphocyte receptor [Petromyzon marinus]
Length = 187
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 81/183 (44%), Gaps = 20/183 (10%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C++K L VP +P L L N IT L P F + +L +DL
Sbjct: 9 ACPSQCSCSGTEVHCQKKSLASVPAGIPTNALNLWLNDNQITNLEPGVFDSLTQLTYLDL 68
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF------I 209
+ NQ++ + V F L +L L LNNN LT LP GVF L L+TL + N
Sbjct: 69 APNQLTALPVGVFDRLVNLQRLWLNNNQLTSLPAGVFDRLVNLQTLDLHNNQLKSIPRGA 128
Query: 210 CDCHLSWLHRWLKRYP-----RLGLYTKCFAPSHI-----KGQNILDIPEHEFKCSGSSM 259
D S H WL P LY K + H G +D KCSG++
Sbjct: 129 FDNLKSLTHIWLSSNPWDCECSDILYLKNWIVQHASIVNPSGNGGVD----NVKCSGTNT 184
Query: 260 ETR 262
R
Sbjct: 185 PVR 187
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 52/134 (38%), Gaps = 26/134 (19%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLP---------------------EATTELTYMVS 332
+CP C C+ V C++K L VP +P ++ T+LTY+
Sbjct: 9 ACPSQCSCSGTEVHCQKKSLASVPAGIPTNALNLWLNDNQITNLEPGVFDSLTQLTYL-- 66
Query: 333 IDRVDKVLLYSYISNNFKRWTNRSRR-LEQNDITELPPKAFANYKRLRRIRLEQNDITEL 391
+ L + F R N R L N +T LP F L+ + L N + +
Sbjct: 67 --DLAPNQLTALPVGVFDRLVNLQRLWLNNNQLTSLPAGVFDRLVNLQTLDLHNNQLKSI 124
Query: 392 PPKAFANYKRLRRM 405
P AF N K L +
Sbjct: 125 PRGAFDNLKSLTHI 138
>gi|395733569|ref|XP_002813600.2| PREDICTED: leucine-rich repeats and immunoglobulin-like domains 1
[Pongo abelii]
Length = 985
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 133 QNDITELPPKAFANYKRLRRIDLSKNQISKVAVD---AFQGLKSLTSLTLNNNNLTYLPD 189
N I+ + AF + LR +DL N+IS D AF GL SL+ L L N + +
Sbjct: 258 HNSISHIAEGAFKGLRNLRVLDLDHNEISGTIEDTSGAFSGLDSLSKLNLGGNAIRSVQF 317
Query: 190 GVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAPSHIKGQNILDIP 248
F ++ L+ L IS +SF+CDC L WL WL R + + C P +KGQ+I +P
Sbjct: 318 DAFVKMKNLKELHISSDSFLCDCQLKWLPPWLIGRMLQAFVTATCAHPESLKGQSIFSVP 377
Query: 249 EHEFKC 254
F C
Sbjct: 378 PESFVC 383
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 133 QNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
+N IT+LP +AF RL ++DL++N+I + FQGL SL L L NN++ L DG F
Sbjct: 115 KNRITQLPVRAF-KLPRLTQLDLNRNRIRLIEGLTFQGLNSLEVLKLQRNNISKLTDGAF 173
Query: 193 AELFRLRTLRISENSFI 209
L ++ L + NS +
Sbjct: 174 WGLSKMHVLHLEYNSLV 190
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAPS 63
L N + + F ++ L+ L IS +SF+CDC L WL WL R + + C P
Sbjct: 307 LGGNAIRSVQFDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLIGRMLQAFVTATCAHPE 366
Query: 64 HIKGQNILDIPEHEFKC 80
+KGQ+I +P F C
Sbjct: 367 SLKGQSIFSVPPESFVC 383
>gi|432115861|gb|ELK37007.1| Leucine-rich repeat and transmembrane domain-containing protein 1
[Myotis davidii]
Length = 376
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 89/210 (42%), Gaps = 54/210 (25%)
Query: 96 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRI 153
CP CRC + VDC +GL ++P LP T L L+ N I +LP AF + +L +
Sbjct: 51 GCPEECRCQTSLNSVDCSHQGLAEIPPDLPPQTLTLHLQDNQIHQLPASAFRSVPQLTTL 110
Query: 154 DLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENS------ 207
+L N +S +A AF GL+ L L L N+L L G+F L +LR L +S N+
Sbjct: 111 NLGNNSLSLLAPGAFHGLQHLRVLNLTQNSLHSLESGLFHSLPQLRELDVSSNNISHLPA 170
Query: 208 ------------------------------------------FICDCHLSWLHRWLKRYP 225
+ C+CHL L WL+++
Sbjct: 171 SLGERWENLTLFAVQQNQLQQLDRVLLESMSSVKRLFLKDNLWKCNCHLLGLKLWLEKFI 230
Query: 226 RLGLYTK---CFAPSHIKGQNILDIPEHEF 252
G C +P KG+++L IP HE
Sbjct: 231 YKGGVMDSVICASPDTWKGKDLLKIP-HEL 259
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 8/114 (7%)
Query: 294 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
CP CRC + VDC +GL ++P LP T LT + +++ ++ ++ S
Sbjct: 51 GCPEECRCQTSLNSVDCSHQGLAEIPPDLPPQT--LTLHLQDNQIHQLPASAFRSVPQLT 108
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N L N ++ L P AF + LR + L QN + L F + +LR +
Sbjct: 109 TLN----LGNNSLSLLAPGAFHGLQHLRVLNLTQNSLHSLESGLFHSLPQLREL 158
>gi|126507768|gb|ABO15156.1| variable lymphocyte receptor B diversity region [Petromyzon
marinus]
Length = 168
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 14/169 (8%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDCR K + VP +P L L N IT+L P F + +L +++
Sbjct: 1 ACPSQCSCHQTTVDCRNKRFSSVPAGIPTDRQNLWLNNNQITKLEPGVFDSLAQLTVLNV 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
S NQ++ + F L L L LNNN L +P G F L L + +S N + C+C +
Sbjct: 61 SDNQLTALPTGVFDKLTQLNHLFLNNNQLKSIPRGAFDNLKSLTHIYLSSNPWDCECSDI 120
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L W+ ++ + +++G +D KCSG++ R+
Sbjct: 121 LYLKNWIVQHASI---------VNLEGYGGVD----NVKCSGTNTPVRA 156
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C VDCR K + VP +P T ++ +++ K L + ++ + T
Sbjct: 1 ACPSQCSCHQTTVDCRNKRFSSVPAGIP--TDRQNLWLNNNQITK--LEPGVFDSLAQLT 56
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ N +T LP F +L + L N + +P AF N K L +
Sbjct: 57 --VLNVSDNQLTALPTGVFDKLTQLNHLFLNNNQLKSIPRGAFDNLKSLTHI 106
>gi|355746588|gb|EHH51202.1| hypothetical protein EGM_10538, partial [Macaca fascicularis]
Length = 1015
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 111/258 (43%), Gaps = 18/258 (6%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L NN++ L DG F L ++ L + NS + + + L+ L +L L A H
Sbjct: 169 LQRNNISKLTDGAFWGLSKMHVLHLEYNSLV-EVNSGSLY-GLTALHQLHLSNNSIARIH 226
Query: 65 IKG----QNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
KG Q + ++ + E+ E ++ I + KGL + +
Sbjct: 227 RKGWSFCQKLHELVLSFNNLTRLDEESLAELSSLSVLRLSHNSISHIAEGAFKGLRSLRV 286
Query: 121 LLPEATTELRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSL 177
L L+ N+I E AF+ L ++ L N+I VA AF GL+ L L
Sbjct: 287 L--------DLDHNEIAGTIEDTSGAFSGLDSLSKLTLFGNKIKSVAKRAFSGLEGLEHL 338
Query: 178 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAP 236
L N + + F ++ L+ L IS +SF+CDC L WL WL R + + C P
Sbjct: 339 NLGGNAIRSVQFDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLMGRMLQAFVTATCAHP 398
Query: 237 SHIKGQNILDIPEHEFKC 254
+KGQ+I +P F C
Sbjct: 399 ESLKGQSIFSVPPESFVC 416
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 133 QNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
+N IT+LP +AF RL ++DL++N+I + FQGL SL L L NN++ L DG F
Sbjct: 124 KNRITQLPVRAF-KLPRLTQLDLNRNRIRLIEGLTFQGLNSLEVLKLQRNNISKLTDGAF 182
Query: 193 AELFRLRTLRISENSFI 209
L ++ L + NS +
Sbjct: 183 WGLSKMHVLHLEYNSLV 199
>gi|119926324|dbj|BAF43202.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 197
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 82/185 (44%), Gaps = 17/185 (9%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C E+ L VP +P T ELRL N IT+L P F + L +DL
Sbjct: 11 ACPAQCSCSGTTVHCHERSLASVPAGIPSTTRELRLYINQITKLEPGVFDSLTLLTYLDL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF------I 209
S NQ++ + F L +L L L N LT LP GVF +L RL+ L + N +
Sbjct: 71 SNNQLTALPAGVFDRLGNLEVLGLCCNKLTELPSGVFDKLTRLKHLGLDGNQLKSVPNGV 130
Query: 210 CDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEH-----------EFKCSGSS 258
LS H WL P T S Q+ + EH KCSG++
Sbjct: 131 FARLLSLTHVWLHTNPWDCQCTDILYLSGWVAQHSGIVREHWVGSSWTVNPDSAKCSGTN 190
Query: 259 METRS 263
R+
Sbjct: 191 TPVRA 195
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 18/118 (15%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTEL-TYMVSIDRV-----DKVLLYSYISN 347
+CP C C+ V C E+ L VP +P T EL Y+ I ++ D + L +Y+
Sbjct: 11 ACPAQCSCSGTTVHCHERSLASVPAGIPSTTRELRLYINQITKLEPGVFDSLTLLTYLD- 69
Query: 348 NFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N +T LP F L + L N +TELP F RL+ +
Sbjct: 70 -----------LSNNQLTALPAGVFDRLGNLEVLGLCCNKLTELPSGVFDKLTRLKHL 116
>gi|76161755|gb|ABA39974.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 169
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 79/169 (46%), Gaps = 13/169 (7%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C K VP +P T L L N +T+L P F + +L R+DL
Sbjct: 1 ACPSQCLCSGTDVNCDGKRFASVPAAIPITTQRLWLSNNQLTKLDPGVFDSLTQLTRLDL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
S NQ++ + V F L LT L L+ N L +P G F L L + + N + C C +
Sbjct: 61 SNNQLTALPVGVFDKLTKLTHLALHINQLKSVPRGAFDNLKSLTHIWLLNNPWDCQCTDI 120
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L W+ ++ S I G+ + KCSG++ R+
Sbjct: 121 LYLSGWVAQH------------SGIVGEGWWTVNPDSAKCSGTNTPVRA 157
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 46/122 (37%), Gaps = 26/122 (21%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNN----- 348
+CP C C+ V+C K VP +P T L ++SNN
Sbjct: 1 ACPSQCLCSGTDVNCDGKRFASVPAAIPITTQRL----------------WLSNNQLTKL 44
Query: 349 ----FKRWTNRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLR 403
F T +R L N +T LP F +L + L N + +P AF N K L
Sbjct: 45 DPGVFDSLTQLTRLDLSNNQLTALPVGVFDKLTKLTHLALHINQLKSVPRGAFDNLKSLT 104
Query: 404 RM 405
+
Sbjct: 105 HI 106
>gi|284010840|dbj|BAI66895.1| variable lymphocyte receptor B [Eptatretus burgeri]
Length = 200
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C KGL VP + +TT L L N + +P F +L+ + L
Sbjct: 23 ACPSRCSCSGTEVNCYNKGLTSVPTGISASTTYLNLGSNKLQSIPNGVFDKLTKLKELGL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
NQ+ + F L LT+L L+ N L +PDG+F L L+ + + N + C C +
Sbjct: 83 GTNQLQSLPNGMFDKLTKLTALGLHTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 142
Query: 215 SWLHRWLKR 223
+L RWL +
Sbjct: 143 DYLSRWLNK 151
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C KGL VP + +TT L + L S + F + T
Sbjct: 23 ACPSRCSCSGTEVNCYNKGLTSVPTGISASTTYL-------NLGSNKLQSIPNGVFDKLT 75
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L N + LP F +L + L N + +P F L+++
Sbjct: 76 KLKELGLGTNQLQSLPNGMFDKLTKLTALGLHTNQLKSVPDGIFDRLTSLQKI 128
>gi|354499812|ref|XP_003511999.1| PREDICTED: probable G-protein coupled receptor 125, partial
[Cricetulus griseus]
Length = 1341
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 64/126 (50%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N I+ + P AF L+R+DL+ N+I + D F+GL +L L L+ N T L
Sbjct: 130 LDLRNNLISRIAPGAFWGLSSLKRLDLTNNRIGCLNADIFRGLTNLVRLNLSGNLFTSLS 189
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
G F L LR+L +CDC++ W+HRW+K T+C P ++ Q + +
Sbjct: 190 QGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCVYPKSLQAQPVTGVK 249
Query: 249 EHEFKC 254
+ C
Sbjct: 250 QELLTC 255
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N T L G F L LR+L +CDC++ W+HRW+K T+C P
Sbjct: 180 LSGNLFTSLSQGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCVYPKS 239
Query: 65 IKGQNILDIPEHEFKCSGPVEKPT 88
++ Q + + + C P+E P+
Sbjct: 240 LQAQPVTGVKQELLTCDPPLELPS 263
>gi|118095559|ref|XP_001233273.1| PREDICTED: immunoglobulin superfamily containing leucine-rich
repeat protein [Gallus gallus]
Length = 422
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 88/212 (41%), Gaps = 56/212 (26%)
Query: 96 SCPHPCRCADG-----IVDCREKGLNKVPILLPEATTELRLEQNDI--------TELP-- 140
+CP PC C+ + +C K L +VP L T L L N I E+P
Sbjct: 19 ACPGPCSCSTKKNGRLLAECAYKELPEVPRGLSPNVTILTLSANRIGWLRRGAFAEVPEV 78
Query: 141 --------------PKAFANYKRLRRIDLSKNQ------------------------ISK 162
P AFA +L+ +DLS N+ ++
Sbjct: 79 QSLWLGYNQIGGAEPGAFATLSQLKNLDLSHNKMVTFPWQDLRNLSGLQILKLNNNRLAG 138
Query: 163 VAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK 222
+ DAFQ L L SL LN+N LT L DG F L L L++ N F C C L WL RW +
Sbjct: 139 LPRDAFQALAELRSLWLNDNQLTTLADGTFHPLPSLSQLQLFNNPFNCSCKLFWLKRWAE 198
Query: 223 RYP---RLGLYTKCFAPSHIKGQNILDIPEHE 251
G T C AP ++G+ + DIP H+
Sbjct: 199 STSVSLTKGGSTLCAAPGRMRGRAVTDIPAHQ 230
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP---RLGLYTKCFA 61
LN+N LT L DG F L L L++ N F C C L WL RW + G T C A
Sbjct: 155 LNDNQLTTLADGTFHPLPSLSQLQLFNNPFNCSCKLFWLKRWAESTSVSLTKGGSTLCAA 214
Query: 62 PSHIKGQNILDIPEHE 77
P ++G+ + DIP H+
Sbjct: 215 PGRMRGRAVTDIPAHQ 230
>gi|21542532|gb|AAH33039.1| LGR4 protein [Homo sapiens]
gi|123983320|gb|ABM83401.1| leucine-rich repeat-containing G protein-coupled receptor 4
[synthetic construct]
gi|123998023|gb|ABM86613.1| leucine-rich repeat-containing G protein-coupled receptor 4
[synthetic construct]
Length = 927
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 67/118 (56%), Gaps = 1/118 (0%)
Query: 92 AAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRL 150
AA P C PC C D VDC KGL VP L T L+L ND++ + PKA + K L
Sbjct: 24 AAPPLCAAPCSCDGDRRVDCSGKGLTAVPEGLSAFTQALQLAGNDLSFIHPKALSGLKEL 83
Query: 151 RRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ + L NQ+ V +A +GL +L SL L+ N++T +P+ F L +LR L + +NS
Sbjct: 84 KVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSL 141
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 19/135 (14%)
Query: 290 AAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPE-------ATTELTYM--VSIDRVDKV 339
AA P C PC C D VDC KGL VP L A +L+++ ++ + ++
Sbjct: 24 AAPPLCAAPCSCDGDRRVDCSGKGLTAVPEGLSAFTQALQLAGNDLSFIHPKALSGLKEL 83
Query: 340 LLYSYISNNFKRWTN---------RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITE 390
+ + +N K + +S RL+ N IT +P +F +LR + L+ N +TE
Sbjct: 84 KVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTE 143
Query: 391 LPPKAFANYKRLRRM 405
+P +N L+ +
Sbjct: 144 VPVHHLSNLPTLQAL 158
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 124 EATTELR---LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN 180
E +LR L+ N +TE+P +N L+ + L+ N+IS + AF L SL L L+
Sbjct: 126 EGLVQLRHLWLDDNSLTEVPVHHLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLH 185
Query: 181 NNNLTYLPDGVFAELFRLRTLRISENSF 208
NN + L F L L TL ++ N+
Sbjct: 186 NNKIRSLSQHCFDGLDNLETLDLNYNNL 213
Score = 44.3 bits (103), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 11/112 (9%)
Query: 105 DGIVDCR-----EKGLNKVPIL----LPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+G+V R + L +VP+ LP L L N I+ +P AF N L + L
Sbjct: 126 EGLVQLRHLWLDDNSLTEVPVHHLSNLP-TLQALTLALNKISSIPDFAFTNLSSLVVLHL 184
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENS 207
N+I ++ F GL +L +L LN NNL P + A L L+ L NS
Sbjct: 185 HNNKIRSLSQHCFDGLDNLETLDLNYNNLGEFPQAIKA-LPSLKELGFHSNS 235
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
A E+ L++N I ++ F LR +DLS+N I ++ AF L +T+L ++ N
Sbjct: 341 HALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIHSRAFATLGPITNLDVSFNE 400
Query: 184 LTYLP 188
LT P
Sbjct: 401 LTSFP 405
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N+I +LP +F L I L +NQI ++ FQGL SL L L+ N + +
Sbjct: 324 LDLSYNNIRDLP--SFNGCHALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIH 381
Query: 189 DGVFAELFRLRTLRISEN 206
FA L + L +S N
Sbjct: 382 SRAFATLGPITNLDVSFN 399
>gi|76161691|gb|ABA39942.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 168
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 80/169 (47%), Gaps = 14/169 (8%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDCR K + VP +P L L N IT+L P F + +L ++L
Sbjct: 1 ACPSQCSCDQTTVDCRNKRFSSVPAGIPTDRQNLWLNNNQITKLEPGVFDSLTQLTSLEL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ++ V V F L LT L L+NN L +P G F L L + + N + C+C +
Sbjct: 61 GGNQLTAVTVGVFDKLTKLTHLYLHNNQLKSVPRGAFDNLKSLTHIYLFNNPWDCECSDI 120
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L W+ ++ + ++ G +D KCSG++ R+
Sbjct: 121 LYLKNWIVQHASI---------VNLWGYGGVD----NVKCSGTNTPVRA 156
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C VDCR K + VP +P T ++ +++ K L + ++ + T
Sbjct: 1 ACPSQCSCDQTTVDCRNKRFSSVPAGIP--TDRQNLWLNNNQITK--LEPGVFDSLTQLT 56
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
S L N +T + F +L + L N + +P AF N K L +
Sbjct: 57 --SLELGGNQLTAVTVGVFDKLTKLTHLYLHNNQLKSVPRGAFDNLKSLTHI 106
>gi|76161599|gb|ABA39896.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 169
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 13/169 (7%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C++K L VP +P T L L N IT+L P F + +L ++L
Sbjct: 1 ACPSQCSCSGTEVHCQKKSLASVPAGIPTTTQVLYLHVNQITKLEPGVFDSLTQLTVLNL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
+ NQ++ + F L LT L L +N L +P G F L L + +S N + C C +
Sbjct: 61 AINQLTALPAGVFDKLTQLTQLGLWDNQLKSIPRGAFDNLKSLTHIWLSSNPWDCQCTDI 120
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L W+ ++ S I G+ + KCSG++ R+
Sbjct: 121 LYLSGWVAQH------------SGIVGEGWWTVNPDNVKCSGTNTPVRA 157
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V C++K L VP +P TT++ Y+ ++++ K L + ++ + T
Sbjct: 1 ACPSQCSCSGTEVHCQKKSLASVPAGIP-TTTQVLYL-HVNQITK--LEPGVFDSLTQLT 56
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N +T LP F +L ++ L N + +P AF N K L +
Sbjct: 57 --VLNLAINQLTALPAGVFDKLTQLTQLGLWDNQLKSIPRGAFDNLKSLTHI 106
>gi|449501220|ref|XP_002191625.2| PREDICTED: probable G-protein coupled receptor 125-like
[Taeniopygia guttata]
Length = 1548
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 66/126 (52%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L+ N I+ + P AF L+R+DL+ N+I + D F+GL +L L L+ N + L
Sbjct: 339 LDLKNNLISTIDPGAFLGLSSLKRLDLTNNRIGCLNADIFRGLVNLIRLNLSGNLFSTLT 398
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
G F L L++L + +CDC++ W+H+WLK TKC P ++ Q + +
Sbjct: 399 QGTFDHLGSLKSLEFQTDYLLCDCNILWMHQWLKERNITVRETKCAYPKSLQSQTVTGVK 458
Query: 249 EHEFKC 254
+ C
Sbjct: 459 QELLTC 464
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N + L G F L L++L + +CDC++ W+H+WLK TKC P
Sbjct: 389 LSGNLFSTLTQGTFDHLGSLKSLEFQTDYLLCDCNILWMHQWLKERNITVRETKCAYPKS 448
Query: 65 IKGQNILDIPEHEFKCSGPVEKPT 88
++ Q + + + C P+E P+
Sbjct: 449 LQSQTVTGVKQELLTCEPPLELPS 472
>gi|169642247|gb|AAI60859.1| Unknown (protein for IMAGE:7321680) [Rattus norvegicus]
Length = 543
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 112/261 (42%), Gaps = 20/261 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFI-----CDCHLSWLHR-WLKRYPRLGLYTK 58
L++N LP+GV + L L+ L + N+ HL L + WL+ L
Sbjct: 201 LSDNMFARLPEGVLSNLGSLQELFLDSNAITELSPHLFSHLLSLEKLWLQHNAISLLPVS 260
Query: 59 CFAPSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKV 118
F S ++ L++ ++ + P G P H + + E +
Sbjct: 261 AF--SSLRNLTFLNLKDNALRT-----LPAGLFTHNPGLLHLSLSYNQLETVPEGSFANL 313
Query: 119 PILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLT 178
L L L N IT LP F N ++L ++ L N ++ + F L L L
Sbjct: 314 RKL-----ASLTLSHNAITHLPENVFRNLEQLVKLSLDSNNLTVLHPTLFHNLSKLQLLD 368
Query: 179 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPR--LGLYTKCFAP 236
L+ N LT LP G+F + L L + N + CDC LS+L WL+ Y +T C P
Sbjct: 369 LSRNQLTMLPGGIFDTNYDLFNLALLGNPWQCDCRLSYLTSWLRLYNDRIFNTHTFCAGP 428
Query: 237 SHIKGQNILDIPEHEFKCSGS 257
+++KGQ + ++ + + C G+
Sbjct: 429 AYLKGQLVPNLKQEQLVCPGN 449
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 119/284 (41%), Gaps = 48/284 (16%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L L+ N + LP F + L + L NQ+ + FQ L+ L +L L N LT L
Sbjct: 126 KLTLDFNRLAALPEDLFHHMDTLESLQLQGNQLQTLPGRLFQSLRYLRTLNLAQNLLTQL 185
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPR-----LGLYTKCFAPSHIKGQ 242
P G+F L L+ L++S+N F R P LG + F S+
Sbjct: 186 PKGMFQSLSSLQILKLSDNMF-------------ARLPEGVLSNLGSLQELFLDSNA--- 229
Query: 243 NILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCA 302
I ++ H F S + + K++ + + P ++ +
Sbjct: 230 -ITELSPHLF----SHLLSLEKLWLQHNAISLLPVSAFSSLRNL---------------- 268
Query: 303 DGIVDCREKGLNKVPILLPEATTELTYM-VSIDRVDKVLLYSYISNNFKRWTNRSRRLEQ 361
++ ++ L +P L L ++ +S ++++ V S+ N ++ S L
Sbjct: 269 -TFLNLKDNALRTLPAGLFTHNPGLLHLSLSYNQLETVPEGSFA--NLRKLA--SLTLSH 323
Query: 362 NDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N IT LP F N ++L ++ L+ N++T L P F N +L+ +
Sbjct: 324 NAITHLPENVFRNLEQLVKLSLDSNNLTVLHPTLFHNLSKLQLL 367
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 24/136 (17%)
Query: 97 CPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDIT------------------- 137
CP C C D + C ++ L +P+ +P T++ + T
Sbjct: 23 CPVGCDCFDRKIFCSDEQLAAIPLDIPSHVTDIVFVETSFTTVGTRAFSGSPNLTKVVFL 82
Query: 138 -----ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
L P AF RL ++++ + S ++ + F L SL LTL+ N L LP+ +F
Sbjct: 83 NTRVHHLEPDAFGGLPRLEDLEVTGSPFSNLSANIFSNLSSLGKLTLDFNRLAALPEDLF 142
Query: 193 AELFRLRTLRISENSF 208
+ L +L++ N
Sbjct: 143 HHMDTLESLQLQGNQL 158
>gi|410899763|ref|XP_003963366.1| PREDICTED: leucine-rich repeat-containing G-protein coupled
receptor 6-like [Takifugu rubripes]
Length = 950
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
Query: 89 GECAAEPSCPHPCRC-ADGI---VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAF 144
G+ +A P CP PC+C DGI VDC E GL+ VP L TT L L N+I+E+ AF
Sbjct: 23 GQVSAAPPCPSPCQCEQDGIFVMVDCSELGLSSVPTNLSPLTTYLDLSMNNISEIQSGAF 82
Query: 145 ANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRIS 204
L + +S NQ+ + A QGL +L L L NN L LPD +L L +LR+
Sbjct: 83 QRLHLLSELRISGNQLRYIPGHALQGLHNLKVLMLQNNQLERLPDDAPWDLPNLLSLRLD 142
Query: 205 EN 206
N
Sbjct: 143 AN 144
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 26/143 (18%)
Query: 287 GECAAEPSCPHPCRC-ADGI---VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLY 342
G+ +A P CP PC+C DGI VDC E GL+ VP L TT L +S++ + ++
Sbjct: 23 GQVSAAPPCPSPCQCEQDGIFVMVDCSELGLSSVPTNLSPLTTYLD--LSMNNISEIQSG 80
Query: 343 SY----------ISNNFKRWTN----------RSRRLEQNDITELPPKAFANYKRLRRIR 382
++ IS N R+ + L+ N + LP A + L +R
Sbjct: 81 AFQRLHLLSELRISGNQLRYIPGHALQGLHNLKVLMLQNNQLERLPDDAPWDLPNLLSLR 140
Query: 383 LEQNDITELPPKAFANYKRLRRM 405
L+ N ++E+P AF +R +
Sbjct: 141 LDANLLSEVPAWAFRGVSSMRHL 163
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
LRL+ N ++E+P AF +R + L N ++++ V A L SL ++TL N +T++
Sbjct: 138 SLRLDANLLSEVPAWAFRGVSSMRHLWLDDNSLTEIPVAALDSLPSLQAMTLALNKITHI 197
Query: 188 PDGVFAELFRLRTLRISEN 206
PD F L L L + N
Sbjct: 198 PDYAFTNLSALVVLHLHNN 216
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 116/299 (38%), Gaps = 29/299 (9%)
Query: 115 LNKVPILLPEATTELR---LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L++VP + +R L+ N +TE+P A + L+ + L+ N+I+ + AF L
Sbjct: 146 LSEVPAWAFRGVSSMRHLWLDDNSLTEIPVAALDSLPSLQAMTLALNKITHIPDYAFTNL 205
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT 231
+L L L+NN++ + F L L TL ++ N R L + LG +
Sbjct: 206 SALVVLHLHNNHIQTMDPRCFEGLHSLETLDLNYNDLQ---EFPVAIRTLSKLQELGFHN 262
Query: 232 KCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECS----TDFHPYNSCPVEKPTG 287
NI IPE F +G+ Y + F G
Sbjct: 263 N----------NIKTIPERAF--AGNPQLQTIHFYENPIQLVGKSAFQFLPKLHTLSLNG 310
Query: 288 ECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYM-VSIDRVDKVLLYSYIS 346
+ + I+ GL+ +P L E L + +S ++++ ++
Sbjct: 311 ATQIQEFPDLKGTSSLEILTLTRAGLSALPPDLCEQLPRLRVLELSYNQIE------HLP 364
Query: 347 NNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ ++ + + L+ N I + F LR + L N I + P AFA+ + L ++
Sbjct: 365 SFYRCSSLQEIGLQHNQIRRIESSTFQQLTSLRALDLSWNLIERIHPDAFASLQSLLKL 423
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 76/191 (39%), Gaps = 30/191 (15%)
Query: 107 IVDCREKGLNKVPILLPEATTELR---LEQNDITELPPKAFANYKRLRRIDLSKNQISKV 163
I+ GL+ +P L E LR L N I LP +F L+ I L NQI ++
Sbjct: 328 ILTLTRAGLSALPPDLCEQLPRLRVLELSYNQIEHLP--SFYRCSSLQEIGLQHNQIRRI 385
Query: 164 AVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN--SFICDCHLSWLHRWL 221
FQ L SL +L L+ N + + FA L L L ++EN S + L L L
Sbjct: 386 ESSTFQQLTSLRALDLSWNLIERIHPDAFASLQSLLKLDLTENRLSSVPVTGLGGLTH-L 444
Query: 222 KRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCP 281
K LY F+P H ++++P Y +C Y SC
Sbjct: 445 KVRGNAELY-DAFSPDHFPRMRVIEMP-----------------YAYQCCV----YGSCD 482
Query: 282 VEKPTGECAAE 292
KP + AE
Sbjct: 483 SYKPASQWDAE 493
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 55/137 (40%), Gaps = 30/137 (21%)
Query: 102 RCADGI-----VDCREKGLNKVPILLPEAT--TELRLEQNDITELPPKAFANYKRLRRID 154
RC +G+ +D L + P+ + + EL N+I +P +AFA +L+ I
Sbjct: 224 RCFEGLHSLETLDLNYNDLQEFPVAIRTLSKLQELGFHNNNIKTIPERAFAGNPQLQTIH 283
Query: 155 LSKNQISKVAVDAFQ-----------------------GLKSLTSLTLNNNNLTYLPDGV 191
+N I V AFQ G SL LTL L+ LP +
Sbjct: 284 FYENPIQLVGKSAFQFLPKLHTLSLNGATQIQEFPDLKGTSSLEILTLTRAGLSALPPDL 343
Query: 192 FAELFRLRTLRISENSF 208
+L RLR L +S N
Sbjct: 344 CEQLPRLRVLELSYNQI 360
>gi|284010850|dbj|BAI66900.1| variable lymphocyte receptor B [Eptatretus burgeri]
Length = 210
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 80/171 (46%), Gaps = 11/171 (6%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ + C KGL VP +P +TT L L+QN + LP F L ++ L
Sbjct: 23 ACPSRCSCSGTELRCYGKGLTSVPTGIPASTTYLDLQQNKLQSLPHGVFDKLTSLTQLYL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
NQ+ + F L LT L L +N L +P G+F L +L T+ + +N + C+C +
Sbjct: 83 GANQLHSLPNGVFDKLTQLTQLVLYSNQLKSIPQGMFDNLKKLDTIYLYKNPWDCECPGI 142
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKI 265
+L W+++ + Y N + KCSGS RS I
Sbjct: 143 HYLSEWIRKNSGIVYYWT----------NRKVLQPDSAKCSGSGKPVRSII 183
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 8/110 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ + C KGL VP +P +TT L + + L S F + T
Sbjct: 23 ACPSRCSCSGTELRCYGKGLTSVPTGIPASTTYLD-------LQQNKLQSLPHGVFDKLT 75
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
+ ++ L N + LP F +L ++ L N + +P F N K+L
Sbjct: 76 SLTQLYLGANQLHSLPNGVFDKLTQLTQLVLYSNQLKSIPQGMFDNLKKL 125
>gi|119928585|dbj|BAF43117.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 171
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 1/131 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC K L VP +P T L L +N IT+L P F L+++ L
Sbjct: 11 ACPAQCSCSGTDVDCDRKSLASVPAGIPTTTQRLWLNRNQITKLEPGVFDRLVNLQQLYL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
+NQ+ ++V F L LT L+L+ N L +P G F L L + + N + C C +
Sbjct: 71 GENQLLALSVGVFDKLTQLTHLSLHTNQLKSIPRGTFDNLKSLTHIWLFGNPWDCACSDI 130
Query: 215 SWLHRWLKRYP 225
+L RW+ ++P
Sbjct: 131 LYLSRWISQHP 141
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 47/113 (41%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ VDC K L VP +P T L ++ +++ K+ F R
Sbjct: 11 ACPAQCSCSGTDVDCDRKSLASVPAGIPTTTQRL--WLNRNQITKLE-----PGVFDRLV 63
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N + L +N + L F +L + L N + +P F N K L +
Sbjct: 64 NLQQLYLGENQLLALSVGVFDKLTQLTHLSLHTNQLKSIPRGTFDNLKSLTHI 116
>gi|354476103|ref|XP_003500264.1| PREDICTED: relaxin receptor 1-like [Cricetulus griseus]
Length = 800
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 71/131 (54%), Gaps = 2/131 (1%)
Query: 76 HEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQND 135
++ + P + EC S P PC C D +DC L VP + T + L+ N
Sbjct: 122 YKLTSTSPWVAKSSECLVG-SVPMPCLCRDLELDCDGANLRAVPSVSSNVTV-MSLQWNF 179
Query: 136 ITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
+ LPP F Y L+++ L N+I V+V AF+GL+SLT L L++N +T+L GVF +L
Sbjct: 180 LRALPPNGFRKYHELQKLCLQNNKIRFVSVSAFRGLRSLTKLYLSHNRITFLKPGVFEDL 239
Query: 196 FRLRTLRISEN 206
RL L I +N
Sbjct: 240 HRLEWLIIEDN 250
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 10/136 (7%)
Query: 271 STDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYM 330
+T + ++ P + EC S P PC C D +DC L VP ++
Sbjct: 119 ATYYKLTSTSPWVAKSSECLVG-SVPMPCLCRDLELDCDGANLRAVP--------SVSSN 169
Query: 331 VSIDRVDKVLLYSYISNNFKRWTNRSRR-LEQNDITELPPKAFANYKRLRRIRLEQNDIT 389
V++ + L + N F+++ + L+ N I + AF + L ++ L N IT
Sbjct: 170 VTVMSLQWNFLRALPPNGFRKYHELQKLCLQNNKIRFVSVSAFRGLRSLTKLYLSHNRIT 229
Query: 390 ELPPKAFANYKRLRRM 405
L P F + RL +
Sbjct: 230 FLKPGVFEDLHRLEWL 245
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 33/201 (16%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N +T+L GVF +L RL L I +N HLS R L Y
Sbjct: 223 LSHNRITFLKPGVFEDLHRLEWLIIEDN------HLS-------RISPLTFYGLNSLILL 269
Query: 65 IKGQNILD-IPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCRE-KGLNKVPILL 122
+ N+L +P+ +P C H R + L + +
Sbjct: 270 VLMNNVLTRLPD------------------KPLCQHMPRLHWLDFEGNHIHNLRNLTFVS 311
Query: 123 PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNN 182
T L + +N I + AF + ++L +DL+ N+I + + F+ LK L+ L ++ N
Sbjct: 312 CNNLTVLVMRKNKINHINEHAFTHLQKLYELDLAINRIEILPRNIFKDLKELSQLNISYN 371
Query: 183 NLTYLPDGVFAELFRLRTLRI 203
+ + F L +L++L +
Sbjct: 372 PIQKIEVNQFDYLVKLKSLNL 392
>gi|119926287|dbj|BAF43185.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 171
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 11/169 (6%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C GL VP +P T L L N IT+L P F + +L ++L
Sbjct: 11 ACPAQCSCSGTTVRCERIGLVSVPAGIPTTTLVLYLNDNQITKLEPGVFDSLTKLTELNL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ++ + F L LT L+L+ N L +P G F L L + + N + C C +
Sbjct: 71 GGNQLTALPTGVFNKLTQLTHLSLHTNQLKSIPRGAFDNLKSLTHIYLFNNPWDCACSDI 130
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L RW+ ++P + + P P+H +CSG++ R+
Sbjct: 131 LYLSRWISQHPGVVRRAESGYPVD---------PDHA-RCSGTNTPVRA 169
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V C GL VP +P TT L ++ +++ K L + ++ + T
Sbjct: 11 ACPAQCSCSGTTVRCERIGLVSVPAGIP--TTTLVLYLNDNQITK--LEPGVFDSLTKLT 66
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L N +T LP F +L + L N + +P AF N K L +
Sbjct: 67 ELN--LGGNQLTALPTGVFNKLTQLTHLSLHTNQLKSIPRGAFDNLKSLTHI 116
>gi|119926253|dbj|BAF43174.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 169
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 68/133 (51%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C+ + VP +P T ELRL N IT+L P F + L+ + L
Sbjct: 11 ACPAQCSCSGASVECQSRSFASVPAGIPTTTRELRLYINQITKLEPGVFDHLANLQHLYL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ+S + F L L+ L L+ N L +P G F L L + + N + C C +
Sbjct: 71 GDNQLSALPAGVFDKLTQLSILNLHTNQLKSIPRGAFDNLKSLTHIYLFNNPWDCACSDI 130
Query: 215 SWLHRWLKRYPRL 227
+L RW+ ++P +
Sbjct: 131 LYLSRWISQHPGV 143
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTEL-TYMVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ V+C+ + VP +P T EL Y+ I +++ ++ +++N +
Sbjct: 11 ACPAQCSCSGASVECQSRSFASVPAGIPTTTRELRLYINQITKLEPG-VFDHLANLQHLY 69
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N ++ LP F +L + L N + +P AF N K L +
Sbjct: 70 ------LGDNQLSALPAGVFDKLTQLSILNLHTNQLKSIPRGAFDNLKSLTHI 116
>gi|74217191|dbj|BAC32864.2| unnamed protein product [Mus musculus]
Length = 432
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 2/131 (1%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL + N E+ P +F L+++ + +Q+S + +AF GL SL L L +NNL+ L
Sbjct: 1 ELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSL 60
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAPSHIKGQNIL 245
P +F L L L + N + CDC + WL WL+ Y +C AP H++G+ ++
Sbjct: 61 PHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAPMHMRGRYLV 120
Query: 246 DIPEHEFKCSG 256
++ + F+CS
Sbjct: 121 EVDQAAFQCSA 131
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAP 62
L +NNL+ LP +F L L L + N + CDC + WL WL+ Y +C AP
Sbjct: 52 LAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAP 111
Query: 63 SHIKGQNILDIPEHEFKCSGP--VEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
H++G+ ++++ + F+CS P ++ P +E R A+ + CR ++ V
Sbjct: 112 MHMRGRYLVEVDQAAFQCSAPFIMDAPRDLNISED------RMAE--LKCRTPPMSSVKW 163
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRID 154
LLP T ++ + N+ R+ ID
Sbjct: 164 LLPNGTVLSHASRHPRISVLNDGTLNFSRVLLID 197
>gi|153791549|ref|NP_001093494.1| leucine rich repeat containing 4 precursor [Danio rerio]
Length = 644
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 120/258 (46%), Gaps = 41/258 (15%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCF--AP 62
L +N LT +P G F L +LR L WL+ P + + F P
Sbjct: 124 LFDNRLTVIPSGAFEYLSKLREL------------------WLRSNPIESIPSYAFNRVP 165
Query: 63 SHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCAD-GIVDCREKGLNKVPIL 121
S ++ ++ ++ + E+ G E H + + G+ + RE +P+L
Sbjct: 166 SLMR-LDLGELRKLEYISEGAFEGL-----------HNLKYLNLGMCNLRE-----MPVL 208
Query: 122 LP-EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN 180
P EL + +N EL P +F K L+++ + ++I+ + +AF + +L L L
Sbjct: 209 TPLVGLEELEMSENYFPELKPGSFRGLKSLKKLWIMNSRITTIERNAFDDVTALVELNLA 268
Query: 181 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAPSH 238
+NNL+ LP +FA L L L + N + CDC + WL WL+ Y +C P++
Sbjct: 269 HNNLSSLPHDLFAPLSYLVELHLHHNPWRCDCDVVWLAWWLREYIPTNSTCCGRCHTPAY 328
Query: 239 IKGQNILDIPEHEFKCSG 256
++G+ ++++ + F+CS
Sbjct: 329 LRGRYLVEVDQSTFQCSA 346
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 63/122 (51%), Gaps = 6/122 (4%)
Query: 87 PTGECAAEPSCPHPCRCAD--GIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAF 144
P+G+ +CP C C++ V C + L +VP +P T L L +N I + F
Sbjct: 34 PSGQL----TCPSVCFCSNVSNKVVCTRRSLVRVPPGIPATTRHLNLMENSIETIEAGTF 89
Query: 145 ANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRIS 204
+ + L + L +N I ++ V AF GL SL +L L +N LT +P G F L +LR L +
Sbjct: 90 QHLRHLEVLQLGRNSIRQIEVGAFSGLNSLNTLELFDNRLTVIPSGAFEYLSKLRELWLR 149
Query: 205 EN 206
N
Sbjct: 150 SN 151
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 14/128 (10%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAP 62
L +NNL+ LP +FA L L L + N + CDC + WL WL+ Y +C P
Sbjct: 267 LAHNNLSSLPHDLFAPLSYLVELHLHHNPWRCDCDVVWLAWWLREYIPTNSTCCGRCHTP 326
Query: 63 SHIKGQNILDIPEHEFKCSGP--VEKPTG-ECAAEPSCPHPCRCADGIVDCREKGLNKVP 119
++++G+ ++++ + F+CS P ++ P +AE R A+ + CR ++ V
Sbjct: 327 AYLRGRYLVEVDQSTFQCSAPFILDAPRDLNISAE-------RVAE--LKCRTAPMSSVR 377
Query: 120 ILLPEATT 127
LLP T
Sbjct: 378 WLLPNGTV 385
>gi|119928641|dbj|BAF43143.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 173
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 65/133 (48%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDCR K VP +P L L N IT+L P F + LR + L
Sbjct: 11 ACPAQCSCSGTTVDCRNKRHASVPAGIPTNAQILYLNNNQITKLEPGVFNSLANLRELHL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
NQ+S + V F L LT L L N L +PDG FA L L + + N + C C +
Sbjct: 71 WGNQLSALPVGVFDNLTQLTRLALRTNQLKSVPDGAFARLSSLTHVWLHTNPWDCQCTDI 130
Query: 215 SWLHRWLKRYPRL 227
+L W+ ++ +
Sbjct: 131 LYLSGWVAQHSGI 143
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKV--LLYSYISNNFKR 351
+CP C C+ VDCR K VP +P ++ Y+ + +++ K+ +++ ++N
Sbjct: 11 ACPAQCSCSGTTVDCRNKRHASVPAGIP-TNAQILYLNN-NQITKLEPGVFNSLAN---- 64
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R L N ++ LP F N +L R+ L N + +P AFA L +
Sbjct: 65 --LRELHLWGNQLSALPVGVFDNLTQLTRLALRTNQLKSVPDGAFARLSSLTHV 116
>gi|70955650|gb|AAZ16386.1| variable lymphocyte receptor B [Eptatretus stoutii]
Length = 251
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 1/129 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C KGL VP +P +TT L N + LP F +L +DL
Sbjct: 23 ACPSRCSCSGTTVNCYNKGLTSVPTGIPASTTGPWLSTNQLQSLPTGVFDKLTQLTYLDL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
N++ + F L L L L NN L +PDG+F + L+ + + N + C C +
Sbjct: 83 QNNKLQSLPSGVFDKLTQLNRLELENNQLKSVPDGIFDRVTSLQKIWLHTNPWDCSCPRI 142
Query: 215 SWLHRWLKR 223
+L RWL +
Sbjct: 143 DYLSRWLNK 151
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C KGL VP +P +TT +S ++ L S + F + T
Sbjct: 23 ACPSRCSCSGTTVNCYNKGLTSVPTGIPASTTG--PWLSTNQ-----LQSLPTGVFDKLT 75
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L+ N + LP F +L R+ LE N + +P F L+++
Sbjct: 76 QLTYLDLQNNKLQSLPSGVFDKLTQLNRLELENNQLKSVPDGIFDRVTSLQKI 128
>gi|119926271|dbj|BAF43177.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 166
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 78/169 (46%), Gaps = 16/169 (9%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C V+C+ + L VP +P T L L N IT+L P F L+++ L
Sbjct: 11 ACPAQCSCPGASVECQSRSLASVPAGIPTTTLVLYLNDNQITKLEPGVFDRLVNLQQLYL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ+S + V F L LT L LN N L +P G F L L + + N + C C +
Sbjct: 71 GDNQLSALPVGVFDKLTQLTDLGLNGNQLKSVPRGAFDNLKSLTHIWLFNNPWDCACSDI 130
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L WL ++ ++G +D + KCSG++ R+
Sbjct: 131 LYLSGWLAQH-----------AGKVQGNGGVD----DVKCSGTNTPVRA 164
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C V+C+ + L VP +P TT L ++ +++ K+ F R
Sbjct: 11 ACPAQCSCPGASVECQSRSLASVPAGIP--TTTLVLYLNDNQITKLE-----PGVFDRLV 63
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N + L N ++ LP F +L + L N + +P AF N K L +
Sbjct: 64 NLQQLYLGDNQLSALPVGVFDKLTQLTDLGLNGNQLKSVPRGAFDNLKSLTHI 116
>gi|402859658|ref|XP_003894263.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 1 [Papio anubis]
Length = 1370
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 133 QNDITELPPKAFANYKRLRRIDLSKNQISKVAVD---AFQGLKSLTSLTLNNNNLTYLPD 189
N I+ + AF + LR +DL N+I+ D AF GL SL+ L L N + +
Sbjct: 626 HNSISHIAEGAFKGLRSLRVLDLDHNEIAGTIEDTSGAFSGLDSLSKLNLGGNAIRSVQF 685
Query: 190 GVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAPSHIKGQNILDIP 248
F ++ L+ L IS +SF+CDC L WL WL R + + C P +KGQ+I +P
Sbjct: 686 DAFVKMKNLKELHISSDSFLCDCQLKWLPPWLMGRMLQAFVTATCAHPESLKGQSIFSVP 745
Query: 249 EHEFKC 254
F C
Sbjct: 746 PESFVC 751
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%)
Query: 106 GIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAV 165
VDC +GL +P LP T L L N ++E+ P F + L+ ++LS N++S++
Sbjct: 312 DSVDCGGRGLAALPGDLPAWTRSLNLSYNKLSEIDPAGFEDLPNLQEVNLSYNKLSEIDP 371
Query: 166 DAFQGLKSLTSLTLNNNNLTYLP 188
F+ L +L + LNNN LT +P
Sbjct: 372 AGFEDLPNLQEVYLNNNELTAIP 394
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 133 QNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
+N IT+LP +AF RL ++DL++N+I + FQGL SL L L NN++ L DG F
Sbjct: 483 KNRITQLPVRAF-KLPRLTQLDLNRNRIRLIEGLTFQGLNSLEVLKLQRNNISKLTDGAF 541
Query: 193 AELFRLRTLRISENSFI 209
L ++ L + NS +
Sbjct: 542 WGLSKMHVLHLEYNSLV 558
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAPS 63
L N + + F ++ L+ L IS +SF+CDC L WL WL R + + C P
Sbjct: 675 LGGNAIRSVQFDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLMGRMLQAFVTATCAHPE 734
Query: 64 HIKGQNILDIPEHEFKC 80
+KGQ+I +P F C
Sbjct: 735 SLKGQSIFSVPPESFVC 751
>gi|119928661|dbj|BAF43152.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 171
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C + V C E+ L VP +P L L +N IT+L F + LR + L
Sbjct: 11 ACPAQCSCPETDVQCHERSLGSVPAGIPTTALRLYLYRNQITKLELGVFDSLANLRELHL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ+S + V F L L L L N LT +P G F L +L+ + + N + C C +
Sbjct: 71 GDNQLSALPVGVFDKLTQLVHLELQFNQLTTVPKGAFDSLTKLQYIWLYSNPWDCACSDI 130
Query: 215 SWLHRWLKRYPRL 227
+L RW+ ++P +
Sbjct: 131 LYLSRWISQHPGV 143
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C + V C E+ L VP +P TT L + +++ K+ L F
Sbjct: 11 ACPAQCSCPETDVQCHERSLGSVPAGIP--TTALRLYLYRNQITKLEL-----GVFDSLA 63
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R L N ++ LP F +L + L+ N +T +P AF + +L+ +
Sbjct: 64 NLRELHLGDNQLSALPVGVFDKLTQLVHLELQFNQLTTVPKGAFDSLTKLQYI 116
>gi|432865328|ref|XP_004070529.1| PREDICTED: leucine-rich repeat-containing G-protein coupled
receptor 6-like [Oryzias latipes]
gi|395132309|dbj|BAM29305.1| leucine-rich repeat-containing G protein-coupled receptor 6
[Oryzias latipes]
Length = 928
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 67/122 (54%), Gaps = 4/122 (3%)
Query: 89 GECAAEPSCPHPCRCA-DGI---VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAF 144
GE PSCP C C DGI VDC E GL+ VP L TT L L N+I+E+ P+AF
Sbjct: 29 GEGPEAPSCPFHCHCEEDGIFLTVDCSEIGLSSVPSNLSPFTTYLDLSMNNISEIQPRAF 88
Query: 145 ANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRIS 204
+ L + +S NQ+ ++ A QGL +L L L NN L LPD +L L +LR+
Sbjct: 89 HHLHLLSELRISGNQLRYISGQALQGLHNLRVLMLQNNQLERLPDDAPWDLPNLLSLRLD 148
Query: 205 EN 206
N
Sbjct: 149 AN 150
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
LRL+ N ++++P +AF + LR + L N ++++ V A L SL ++TL N +T++P
Sbjct: 145 LRLDANLLSDVPSEAFEGVRSLRHLWLDDNSLTEIPVMALDSLPSLQAMTLALNQITHIP 204
Query: 189 DGVFAELFRLRTLRISEN 206
D FA L L L + N
Sbjct: 205 DYAFANLSALVVLHLHNN 222
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 26/143 (18%)
Query: 287 GECAAEPSCPHPCRCA-DGI---VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLY 342
GE PSCP C C DGI VDC E GL+ VP L TT L +S++ + ++
Sbjct: 29 GEGPEAPSCPFHCHCEEDGIFLTVDCSEIGLSSVPSNLSPFTTYLD--LSMNNISEIQPR 86
Query: 343 SY----------ISNNFKRWTN----------RSRRLEQNDITELPPKAFANYKRLRRIR 382
++ IS N R+ + R L+ N + LP A + L +R
Sbjct: 87 AFHHLHLLSELRISGNQLRYISGQALQGLHNLRVLMLQNNQLERLPDDAPWDLPNLLSLR 146
Query: 383 LEQNDITELPPKAFANYKRLRRM 405
L+ N ++++P +AF + LR +
Sbjct: 147 LDANLLSDVPSEAFEGVRSLRHL 169
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 79/196 (40%), Gaps = 30/196 (15%)
Query: 107 IVDCREKGLNKVPILLPEATTELR---LEQNDITELPPKAFANYKRLRRIDLSKNQISKV 163
I+ GL+ +P+ L E LR L N I +LP +F + L+ I L N+I ++
Sbjct: 334 ILTLTRAGLSALPLDLCEQLPRLRVLELSHNQIEDLP--SFYHCSALQEIGLQHNKIRRI 391
Query: 164 AVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN--SFICDCHLSWLHRWL 221
FQ L SL +L L+ N L + F L L L +SEN S + L L L
Sbjct: 392 ESSTFQQLTSLKALDLSWNVLESIHPDAFVSLHSLIKLDLSENRLSSVPVAGLGGLTH-L 450
Query: 222 KRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCP 281
K LY + F P H ++++P Y +C Y SC
Sbjct: 451 KLRGNTFLY-EAFGPDHFPHMRVIEMP-----------------YAYQCCV----YASCD 488
Query: 282 VEKPTGECAAEPSCPH 297
KP G E S H
Sbjct: 489 SYKPAGSWDTEQSNAH 504
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 100 PCRCADGIVDCR-----EKGLNKVPILLPEATTELR---LEQNDITELPPKAFANYKRLR 151
P +G+ R + L ++P++ ++ L+ L N IT +P AFAN L
Sbjct: 156 PSEAFEGVRSLRHLWLDDNSLTEIPVMALDSLPSLQAMTLALNQITHIPDYAFANLSALV 215
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGV 191
+ L N I + F+GL+SL +L LN N+L P V
Sbjct: 216 VLHLHNNHIQSMGSRCFEGLQSLETLDLNYNDLQEFPVAV 255
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 115 LNKVPILLPEATTELR---LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL 171
L+ VP E LR L+ N +TE+P A + L+ + L+ NQI+ + AF L
Sbjct: 152 LSDVPSEAFEGVRSLRHLWLDDNSLTEIPVMALDSLPSLQAMTLALNQITHIPDYAFANL 211
Query: 172 KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+L L L+NN++ + F L L TL ++ N
Sbjct: 212 SALVVLHLHNNHIQSMGSRCFEGLQSLETLDLNYNDL 248
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 30/135 (22%)
Query: 102 RCADGI-----VDCREKGLNKVPILLPEAT--TELRLEQNDITELPPKAFANYKRLRRID 154
RC +G+ +D L + P+ + + EL N+I +P +AF +L+ I
Sbjct: 230 RCFEGLQSLETLDLNYNDLQEFPVAVRTLSKLQELGFHNNNIKAIPERAFVGNPQLQTIH 289
Query: 155 LSKNQISKVAVDAFQ-----------------------GLKSLTSLTLNNNNLTYLPDGV 191
+N I V AFQ G SL LTL L+ LP +
Sbjct: 290 FYENPIQFVGKSAFQFLPKLHTLSLNGATQIQEFPDLKGTTSLEILTLTRAGLSALPLDL 349
Query: 192 FAELFRLRTLRISEN 206
+L RLR L +S N
Sbjct: 350 CEQLPRLRVLELSHN 364
>gi|291387423|ref|XP_002710288.1| PREDICTED: leucine rich repeat transmembrane neuronal 2
[Oryctolagus cuniculus]
Length = 516
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP CRC + C +G + VP + + L L N ITEL FA++ +L
Sbjct: 29 ALGMACPPKCRCEKLLFYCDSQGFHSVPNATDKGSLGLSLRHNHITELERDQFASFSQLT 88
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICD 211
+ L NQIS V DAFQGL L L L++N + YLP+ F +L L+ L +S N
Sbjct: 89 WLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFN----- 143
Query: 212 CHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
LS LH P L + H++ ++ IP F
Sbjct: 144 -QLSSLH------PELFYGLRKLQTLHLRSNSLRTIPVRLF 177
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 106/258 (41%), Gaps = 24/258 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N + YLP+ F +L L+ L +S N LS LH P L + H
Sbjct: 116 LSSNKIFYLPNTTFTQLINLQNLDLSFN------QLSSLH------PELFYGLRKLQTLH 163
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL--------N 116
++ ++ IP F +E S G++ RE L N
Sbjct: 164 LRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLAR--NGFAGLIKLRELHLEHNQLTKIN 221
Query: 117 KVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
L + L L+ N I+ L + L ++DL+ N+I + + F+ + +L
Sbjct: 222 FAHFLRLSSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKI 281
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFA 235
L ++NN L L + L L T+ +S N + C + L WL + R C +
Sbjct: 282 LLMDNNKLNSLDSKILNSLKSLTTVGLSGNLWECSPRICALASWLGSFQGRWEHSILCHS 341
Query: 236 PSHIKGQNILDIPEHEFK 253
P H +G++ILD H F+
Sbjct: 342 PDHTQGEDILD-AVHGFQ 358
>gi|119928629|dbj|BAF43137.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 170
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C+ + L VP +P T LRL N IT+L P F + +L + L
Sbjct: 11 ACPARCSCSGTTVECQSRSLASVPAGIPSTTRMLRLYNNQITKLEPGVFDSLMQLTELSL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
S NQ++ + F L SL L+NN L +PDG FA L L + + N + C C +
Sbjct: 71 SYNQMTTLPEAVFDRLGSLQRFDLSNNQLKSVPDGAFARLSSLTHVWLHTNPWDCQCTDI 130
Query: 215 SWLHRWLKRY 224
+L W+ ++
Sbjct: 131 LYLSGWVAQH 140
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTEL-TYMVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ V+C+ + L VP +P T L Y I +++ + ++ +
Sbjct: 11 ACPARCSCSGTTVECQSRSLASVPAGIPSTTRMLRLYNNQITKLEPGVF-----DSLMQL 65
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
T S L N +T LP F L+R L N + +P AFA L +
Sbjct: 66 TELS--LSYNQMTTLPEAVFDRLGSLQRFDLSNNQLKSVPDGAFARLSSLTHV 116
>gi|76162219|gb|ABA40183.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 161
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C++K L VP +P T L L N +T+L P F + +L ++L
Sbjct: 1 ACPSQCSCSGTEVHCQKKSLASVPAGIPTTTQRLWLSNNQLTKLDPGVFDSLTQLTYLNL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ++ + V F L LT L L+ N L +PDG FA L L + + N + C C +
Sbjct: 61 GGNQLTALPVGVFDKLTKLTHLALHINQLKSIPDGAFARLPSLTHVWLHTNPWDCACSDI 120
Query: 215 SWLHRWLKRY 224
+L WL ++
Sbjct: 121 LYLSGWLGQH 130
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V C++K L VP +P T L +S +++ K+ + S +
Sbjct: 1 ACPSQCSCSGTEVHCQKKSLASVPAGIPTTTQRL--WLSNNQLTKLDPGVFDSLTQLTYL 58
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N L N +T LP F +L + L N + +P AFA L +
Sbjct: 59 N----LGGNQLTALPVGVFDKLTKLTHLALHINQLKSIPDGAFARLPSLTHV 106
>gi|403272501|ref|XP_003928098.1| PREDICTED: LOW QUALITY PROTEIN: relaxin receptor 1 [Saimiri
boliviensis boliviensis]
Length = 733
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 66/111 (59%), Gaps = 1/111 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
S P CRC +DC E L VP + T + L+ N I +LPP F NY L+++ L
Sbjct: 99 SVPLQCRCQGLELDCDETNLRAVPSVSSNVTV-MSLQWNLIRKLPPDCFKNYHDLQKLYL 157
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
N+I+ +++ AF+GL SLT L L++N +T+L GVF +L RL L I +N
Sbjct: 158 QNNKITSISIYAFRGLSSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDN 208
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 43/112 (38%), Gaps = 31/112 (27%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
S P CRC +DC E L V P ++ +T M
Sbjct: 99 SVPLQCRCQGLELDCDETNLRAV----PSVSSNVTVM----------------------- 131
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L+ N I +LPP F NY L+++ L+ N IT + AF L ++
Sbjct: 132 ----SLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLSSLTKL 179
>gi|281354351|gb|EFB29935.1| hypothetical protein PANDA_010615 [Ailuropoda melanoleuca]
Length = 737
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 68/131 (51%), Gaps = 2/131 (1%)
Query: 76 HEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQND 135
H P E T EC S P C C VDC E L VP + T + L+ N
Sbjct: 59 HRMTSPYPFETQTSECLVG-SVPMQCLCRGLEVDCDETNLRAVPSVSSNVTI-MSLQWNL 116
Query: 136 ITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I +LPP F Y L+++ L N+I + + AF+GL SLT L L++N +T+L GVF +L
Sbjct: 117 IRKLPPDGFKKYHNLQKLCLQNNRIRSIPIYAFRGLHSLTKLYLSHNRITFLKPGVFEDL 176
Query: 196 FRLRTLRISEN 206
RL L I +N
Sbjct: 177 HRLEWLIIEDN 187
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 53/126 (42%), Gaps = 10/126 (7%)
Query: 281 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL 340
P E T EC S P C C VDC E L VP ++ V+I + L
Sbjct: 66 PFETQTSECLVG-SVPMQCLCRGLEVDCDETNLRAVP--------SVSSNVTIMSLQWNL 116
Query: 341 LYSYISNNFKRWTNRSRR-LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANY 399
+ + FK++ N + L+ N I +P AF L ++ L N IT L P F +
Sbjct: 117 IRKLPPDGFKKYHNLQKLCLQNNRIRSIPIYAFRGLHSLTKLYLSHNRITFLKPGVFEDL 176
Query: 400 KRLRRM 405
RL +
Sbjct: 177 HRLEWL 182
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL L N I PP+ F + K L +++LS N I K+ D F L L SL+L ++ +
Sbjct: 278 ELDLGSNKIENFPPQVFKDLKELSQLNLSYNPIQKIQADQFDYLVKLRSLSLEGIEISNI 337
Query: 188 PDGVFAELFRL 198
+F L L
Sbjct: 338 QQRMFRPLTNL 348
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 76/200 (38%), Gaps = 31/200 (15%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N +T+L GVF +L RL L I +N HLS + +P
Sbjct: 160 LSHNRITFLKPGVFEDLHRLEWLIIEDN------HLSRI-----------------SPLT 196
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCRE-KGLNKVPILLP 123
G N L + + +P C H R + L +
Sbjct: 197 FYGLNSLIL-------LALMNNVLTHLPDKPLCQHMPRLHWLDFEGNHIHNLRNFTFISC 249
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
T L + +N I L FA ++L +DL N+I F+ LK L+ L L+ N
Sbjct: 250 SNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENFPPQVFKDLKELSQLNLSYNP 309
Query: 184 LTYLPDGVFAELFRLRTLRI 203
+ + F L +LR+L +
Sbjct: 310 IQKIQADQFDYLVKLRSLSL 329
>gi|301772576|ref|XP_002921711.1| PREDICTED: relaxin receptor 1-like [Ailuropoda melanoleuca]
Length = 820
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 68/131 (51%), Gaps = 2/131 (1%)
Query: 76 HEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQND 135
H P E T EC S P C C VDC E L VP + T + L+ N
Sbjct: 142 HRMTSPYPFETQTSECLVG-SVPMQCLCRGLEVDCDETNLRAVPSVSSNVTI-MSLQWNL 199
Query: 136 ITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I +LPP F Y L+++ L N+I + + AF+GL SLT L L++N +T+L GVF +L
Sbjct: 200 IRKLPPDGFKKYHNLQKLCLQNNRIRSIPIYAFRGLHSLTKLYLSHNRITFLKPGVFEDL 259
Query: 196 FRLRTLRISEN 206
RL L I +N
Sbjct: 260 HRLEWLIIEDN 270
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 53/126 (42%), Gaps = 10/126 (7%)
Query: 281 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL 340
P E T EC S P C C VDC E L VP ++ V+I + L
Sbjct: 149 PFETQTSECLVG-SVPMQCLCRGLEVDCDETNLRAVP--------SVSSNVTIMSLQWNL 199
Query: 341 LYSYISNNFKRWTNRSRR-LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANY 399
+ + FK++ N + L+ N I +P AF L ++ L N IT L P F +
Sbjct: 200 IRKLPPDGFKKYHNLQKLCLQNNRIRSIPIYAFRGLHSLTKLYLSHNRITFLKPGVFEDL 259
Query: 400 KRLRRM 405
RL +
Sbjct: 260 HRLEWL 265
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL L N I PP+ F + K L +++LS N I K+ D F L L SL+L ++ +
Sbjct: 361 ELDLGSNKIENFPPQVFKDLKELSQLNLSYNPIQKIQADQFDYLVKLRSLSLEGIEISNI 420
Query: 188 PDGVFAELFRL 198
+F L L
Sbjct: 421 QQRMFRPLTNL 431
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 76/200 (38%), Gaps = 31/200 (15%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N +T+L GVF +L RL L I +N HLS + +P
Sbjct: 243 LSHNRITFLKPGVFEDLHRLEWLIIEDN------HLSRI-----------------SPLT 279
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCRE-KGLNKVPILLP 123
G N L + + +P C H R + L +
Sbjct: 280 FYGLNSLIL-------LALMNNVLTHLPDKPLCQHMPRLHWLDFEGNHIHNLRNFTFISC 332
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
T L + +N I L FA ++L +DL N+I F+ LK L+ L L+ N
Sbjct: 333 SNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENFPPQVFKDLKELSQLNLSYNP 392
Query: 184 LTYLPDGVFAELFRLRTLRI 203
+ + F L +LR+L +
Sbjct: 393 IQKIQADQFDYLVKLRSLSL 412
>gi|449267988|gb|EMC78872.1| Immunoglobulin superfamily containing leucine-rich repeat protein 2
[Columba livia]
Length = 694
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 86/221 (38%), Gaps = 59/221 (26%)
Query: 96 SCPHPCRCAD----GIVDCREKGLNKVPILLPEATTELRLEQNDITELP----------- 140
+CP PC C D DC K L VP LP T L L N IT L
Sbjct: 18 ACPEPCACVDKYAHQFADCAYKDLQVVPTGLPSNVTTLSLSANKITSLQRRSFVEVTQVT 77
Query: 141 -------------PKAFANYKRLRRIDLSKNQI------------------------SKV 163
P FA +L+ +D+S NQI + V
Sbjct: 78 SLWLAHNEIRSIEPGTFAVLVQLKNLDISHNQIVDFPWQDLYNLSALQLLKMNNNHMALV 137
Query: 164 AVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK- 222
AF LK L SL +NNN T L +G+F L L L+I N F C C L WL +W+
Sbjct: 138 PQGAFHTLKDLRSLRINNNKFTALAEGIFDSLTSLSHLQIYNNPFNCSCKLQWLKKWMDS 197
Query: 223 ---RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSME 260
P T C P ++G + IP + +C+ +++
Sbjct: 198 TLISIPEKDSIT-CAVPEQLRGVPVGKIP--DVQCASPTVQ 235
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK----RYPRLGLYTKCF 60
+NNN T L +G+F L L L+I N F C C L WL +W+ P T C
Sbjct: 153 INNNKFTALAEGIFDSLTSLSHLQIYNNPFNCSCKLQWLKKWMDSTLISIPEKDSIT-CA 211
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEKPT 88
P ++G + IP + +C+ P + T
Sbjct: 212 VPEQLRGVPVGKIP--DVQCASPTVQLT 237
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 10/116 (8%)
Query: 294 SCPHPCRCAD----GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNF 349
+CP PC C D DC K L VP LP T L+ +S +++ + S++
Sbjct: 18 ACPEPCACVDKYAHQFADCAYKDLQVVPTGLPSNVTTLS--LSANKITSLQRRSFVEVT- 74
Query: 350 KRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
S L N+I + P FA +L+ + + N I + P + N L+ +
Sbjct: 75 ---QVTSLWLAHNEIRSIEPGTFAVLVQLKNLDISHNQIVDFPWQDLYNLSALQLL 127
>gi|444726905|gb|ELW67420.1| Leucine-rich repeat-containing protein 4 [Tupaia chinensis]
Length = 653
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 2/131 (1%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL + N E+ P +F L+++ + +Q+S + +AF GL SL L L +NNL+ L
Sbjct: 221 ELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSL 280
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAPSHIKGQNIL 245
P +F L L L + N + CDC + WL WL+ Y +C AP H++G+ ++
Sbjct: 281 PHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAPMHMRGRYLV 340
Query: 246 DIPEHEFKCSG 256
++ + F+CS
Sbjct: 341 EVDQASFQCSA 351
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 96 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRI 153
+CP C C++ V C +GL++VP +P T L L +N+I + F + L +
Sbjct: 44 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVL 103
Query: 154 DLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
L +N I ++ V AF GL SL +L L +N LT +P G F L +LR L + N
Sbjct: 104 QLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNN 156
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAP 62
L +NNL+ LP +F L L L + N + CDC + WL WL+ Y +C AP
Sbjct: 272 LAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAP 331
Query: 63 SHIKGQNILDIPEHEFKCSGP--VEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
H++G+ ++++ + F+CS P ++ P +E R A+ + CR ++ V
Sbjct: 332 MHMRGRYLVEVDQASFQCSAPFIMDAPRDLNISE------GRMAE--LKCRTPPMSSVKW 383
Query: 121 LLPEATT 127
LLP T
Sbjct: 384 LLPNGTV 390
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 294 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
+CP C C++ V C +GL++VP +P T L M + ++ + + ++ +
Sbjct: 44 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHH---- 99
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+L +N I ++ AF L + L N +T +P AF +LR +
Sbjct: 100 --LEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLREL 151
>gi|150247139|ref|NP_001092847.1| leucine-rich repeat transmembrane neuronal protein 2 precursor [Bos
taurus]
gi|426229630|ref|XP_004008892.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 2
[Ovis aries]
gi|148878145|gb|AAI46062.1| LRRTM2 protein [Bos taurus]
gi|296485300|tpg|DAA27415.1| TPA: leucine rich repeat transmembrane neuronal 2 [Bos taurus]
Length = 516
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP CRC + C +G + VP + + L L N ITEL FA++ +L
Sbjct: 29 ALGMACPPKCRCEKLLFYCDSQGFHSVPNTTDKGSLGLSLRHNHITELERDQFASFSQLT 88
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICD 211
+ L NQIS V DAFQGL L L L++N + YLP+ F +L L+ L +S N
Sbjct: 89 WLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFN----- 143
Query: 212 CHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
LS LH P L + H++ ++ IP F
Sbjct: 144 -QLSSLH------PELFYGLRKLQTLHLRSNSLRTIPVRLF 177
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 106/258 (41%), Gaps = 24/258 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N + YLP+ F +L L+ L +S N LS LH P L + H
Sbjct: 116 LSSNKIFYLPNTTFTQLINLQNLDLSFN------QLSSLH------PELFYGLRKLQTLH 163
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL--------N 116
++ ++ IP F +E S G++ RE L N
Sbjct: 164 LRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLAR--NGFAGLIKLRELHLEHNQLTKIN 221
Query: 117 KVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
L + L L+ N I+ L + L ++DL+ N+I + + F+ + +L
Sbjct: 222 FAHFLRLSSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKI 281
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFA 235
L ++NN L L + L L T+ +S N + C + L WL + R C +
Sbjct: 282 LLMDNNKLNSLDSKILNSLRSLTTVGLSGNLWECSPRICALASWLGSFQGRWEHSILCHS 341
Query: 236 PSHIKGQNILDIPEHEFK 253
P H +G++ILD H F+
Sbjct: 342 PDHTQGEDILD-AVHGFQ 358
>gi|76162338|gb|ABA40238.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 168
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C++K L VP +P T +L L N IT+L P F + +L ++L
Sbjct: 1 ACPSQCSCSGTEVHCQKKSLASVPAGIPTTTEKLVLFSNQITKLEPGVFDSLTQLTSLEL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ++ V V F L LT L L+ N L +P GVF L L + + N + C+C +
Sbjct: 61 GGNQLTAVTVGVFDKLTKLTHLALHINQLKSIPRGVFDNLKSLTHIYLFNNPWDCECSDI 120
Query: 215 SWLHRWLKRYPRL 227
+L W+ ++ +
Sbjct: 121 LYLKNWIVQHASI 133
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V C++K L VP +P T +L +++ K L + ++ + T
Sbjct: 1 ACPSQCSCSGTEVHCQKKSLASVPAGIPTTTEKLVLFS--NQITK--LEPGVFDSLTQLT 56
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
S L N +T + F +L + L N + +P F N K L +
Sbjct: 57 --SLELGGNQLTAVTVGVFDKLTKLTHLALHINQLKSIPRGVFDNLKSLTHI 106
>gi|403294426|ref|XP_003938188.1| PREDICTED: G-protein coupled receptor 124 [Saimiri boliviensis
boliviensis]
Length = 1501
Score = 85.1 bits (209), Expect = 6e-14, Method: Composition-based stats.
Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 1/131 (0%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L L N I+ + P AF L+R+DLS N+I ++ + FQGL L L ++ N + L
Sbjct: 299 KLDLRNNVISTVQPGAFLGLGELKRLDLSNNRIGCLSSETFQGLPRLLRLNISGNIFSSL 358
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTKCFAPSHIKGQNILD 246
GVF EL L+ + + CDCHL WL W + R +L +T C PS + Q +
Sbjct: 359 QPGVFDELPALKVVDLGTEFLTCDCHLRWLLPWARNRSLQLSEHTLCAYPSALHAQALGS 418
Query: 247 IPEHEFKCSGS 257
+ E + C G+
Sbjct: 419 LQEAQLCCEGA 429
Score = 52.4 bits (124), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 1 MPRTL----NNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGL 55
+PR L + N + L GVF EL L+ + + CDCHL WL W + R +L
Sbjct: 342 LPRLLRLNISGNIFSSLQPGVFDELPALKVVDLGTEFLTCDCHLRWLLPWARNRSLQLSE 401
Query: 56 YTKCFAPSHIKGQNILDIPEHEFKCSGPVE 85
+T C PS + Q + + E + C G +E
Sbjct: 402 HTLCAYPSALHAQALGSLQEAQLCCEGALE 431
>gi|149726304|ref|XP_001504304.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 2
[Equus caballus]
Length = 516
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP CRC + C +G + VP + + L L N ITEL FA++ +L
Sbjct: 29 ALGMACPPKCRCEKLLFYCDSQGFHSVPNATDQGSLGLSLRHNRITELERDQFASFSQLT 88
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICD 211
+ L NQIS V DAFQGL L L L++N + YLP+ F +L L+ L +S N
Sbjct: 89 WLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFN----- 143
Query: 212 CHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
LS LH P L + H++ ++ IP F
Sbjct: 144 -QLSSLH------PELFYGLRKLQTLHLRSNSLRTIPVRLF 177
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 106/258 (41%), Gaps = 24/258 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N + YLP+ F +L L+ L +S N LS LH P L + H
Sbjct: 116 LSSNKIFYLPNTTFTQLINLQNLDLSFN------QLSSLH------PELFYGLRKLQTLH 163
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL--------N 116
++ ++ IP F +E S G++ RE L N
Sbjct: 164 LRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLAR--NGFAGLIKLRELHLEHNQLTKIN 221
Query: 117 KVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
L + L L+ N I+ L + L ++DL+ N+I + + F+ + +L
Sbjct: 222 FAHFLRLSSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKI 281
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFA 235
L ++NN L L + L L T+ +S N + C + L WL + R C +
Sbjct: 282 LLMDNNKLNSLDSKILNSLRSLTTVGLSGNLWECSPRICALASWLGSFQGRWEHSILCHS 341
Query: 236 PSHIKGQNILDIPEHEFK 253
P H +G++ILD H F+
Sbjct: 342 PDHTQGEDILD-AVHGFQ 358
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 10/118 (8%)
Query: 290 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSI--DRVDKVLLYSYISN 347
A +CP CRC + C +G + V P AT + + +S+ +R+ ++ + S
Sbjct: 29 ALGMACPPKCRCEKLLFYCDSQGFHSV----PNATDQGSLGLSLRHNRITELERDQFASF 84
Query: 348 NFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ W + L+ N I+ + AF +L+ + L N I LP F L+ +
Sbjct: 85 SQLTWLH----LDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNL 138
>gi|239582714|ref|NP_005815.2| leucine-rich repeat-containing protein 17 isoform 2 precursor [Homo
sapiens]
gi|41472890|gb|AAS07483.1| unknown [Homo sapiens]
Length = 313
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 118/291 (40%), Gaps = 45/291 (15%)
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
+DC+E+ L V P+ + L +N I L F+ +K+L+ +DL +N+ISK+ +A
Sbjct: 65 LDCQERKLVYVLPGWPQDLLHMLLARNKIRTLKNNMFSKFKKLKSLDLQQNEISKIESEA 124
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYP 225
F GL LT+L L +N + L + VF L LR+ +N + C C + L L+ R
Sbjct: 125 FFGLNKLTTLLLQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCEIETLISMLQIPRNR 184
Query: 226 RLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKP 285
LG Y KC +P K + + I + C+ EE P P
Sbjct: 185 NLGNYAKCESPQEQKNKKLRQIKSEQL-CN------------EEEKEQLDPKPQVSGRPP 231
Query: 286 TGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYI 345
+ + + H +DC+ K L KVP +P +L
Sbjct: 232 VIKPEVDSTFCHNYVFPIQTLDCKRKELKKVPNNIPPDIVKLD----------------- 274
Query: 346 SNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L N I +L PK F + L+++ L N I + P +
Sbjct: 275 -------------LSYNKINQLRPKEFEDVHELKKLNLSSNGIEFIDPGSL 312
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 75/169 (44%), Gaps = 13/169 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +N + L + VF L LR+ +N + C C + L L+ R LG Y KC +P
Sbjct: 136 LQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCEIETLISMLQIPRNRNLGNYAKCESP 195
Query: 63 SHIKGQNILDIPEHEFKCSGPVEK--PTGECAAEPSCPHP----CRCADGI-----VDCR 111
K + + I + E+ P + + P P C + + +DC+
Sbjct: 196 QEQKNKKLRQIKSEQLCNEEEKEQLDPKPQVSGRPPVIKPEVDSTFCHNYVFPIQTLDCK 255
Query: 112 EKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQI 160
K L KVP +P +L L N I +L PK F + L++++LS N I
Sbjct: 256 RKELKKVPNNIPPDIVKLDLSYNKINQLRPKEFEDVHELKKLNLSSNGI 304
>gi|76162066|gb|ABA40117.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 209
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 62/113 (54%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C++K L VP +P T L L N IT+L P F +L+++ L
Sbjct: 1 ACPSQCSCSGTEVHCQKKSLASVPAGIPTTTQVLYLHVNQITKLEPGVFDRLVKLQKLWL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ NQ++ + F L LT L L+NN LT LP GVF L L+TL + +N
Sbjct: 61 NSNQLTSLPAGVFDRLTQLTRLDLDNNQLTVLPAGVFDSLVNLQTLYLHQNEL 113
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 57/130 (43%), Gaps = 18/130 (13%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS---------IDRVDKV----- 339
+CP C C+ V C++K L VP +P T L V+ DR+ K+
Sbjct: 1 ACPSQCSCSGTEVHCQKKSLASVPAGIPTTTQVLYLHVNQITKLEPGVFDRLVKLQKLWL 60
Query: 340 ---LLYSYISNNFKRWTNRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKA 395
L S + F R T +R L+ N +T LP F + L+ + L QN++T LP
Sbjct: 61 NSNQLTSLPAGVFDRLTQLTRLDLDNNQLTVLPAGVFDSLVNLQTLYLHQNELTTLPAGV 120
Query: 396 FANYKRLRRM 405
F +L +
Sbjct: 121 FNKLTQLTHL 130
>gi|350588914|ref|XP_003482743.1| PREDICTED: leucine-rich repeat-containing protein 17-like, partial
[Sus scrofa]
Length = 257
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 79/147 (53%), Gaps = 2/147 (1%)
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
+DC+E+ L V PE + L +N I L K F+ +K+L+ +DL +N+ISK+ +A
Sbjct: 65 LDCQERKLVYVLSGWPEDLLHMLLARNKIRVLKNKMFSKFKKLKTLDLQQNEISKIESEA 124
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYP 225
F GL LT+L L +N +T L + VF L LR+ +N + C C + L L+ R
Sbjct: 125 FSGLNKLTTLLLQHNKITVLTEEVFIYTPLLSYLRLYDNPWHCTCEMETLISMLQIPRNR 184
Query: 226 RLGLYTKCFAPSHIKGQNILDIPEHEF 252
LG Y KC +P +K + + + +
Sbjct: 185 NLGNYAKCESPYELKNKKLKQVKSEQL 211
>gi|344270937|ref|XP_003407298.1| PREDICTED: leucine-rich repeat-containing protein 4-like [Loxodonta
africana]
Length = 652
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 2/131 (1%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL + N E+ P +F L+++ + +Q+S + +AF GL SL L L +NNL+ L
Sbjct: 221 ELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSL 280
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAPSHIKGQNIL 245
P +F L L L + N + CDC + WL WL+ Y +C AP H++G+ ++
Sbjct: 281 PHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAPMHMRGRYLV 340
Query: 246 DIPEHEFKCSG 256
++ + F+CS
Sbjct: 341 EVDQASFQCSA 351
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 96 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRI 153
+CP C C++ V C +GL++VP +P T L L +N+I + F + L +
Sbjct: 44 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVL 103
Query: 154 DLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
L +N I ++ V AF GL SL +L L +N LT +P G F L +LR L + N
Sbjct: 104 QLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNN 156
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAP 62
L +NNL+ LP +F L L L + N + CDC + WL WL+ Y +C AP
Sbjct: 272 LAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAP 331
Query: 63 SHIKGQNILDIPEHEFKCSGP--VEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
H++G+ ++++ + F+CS P ++ P +E R A+ + CR ++ V
Sbjct: 332 MHMRGRYLVEVDQASFQCSAPFIMDAPRDLNISE------GRMAE--LKCRTPPMSSVKW 383
Query: 121 LLPEATT 127
LLP T
Sbjct: 384 LLPNGTV 390
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 294 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
+CP C C++ V C +GL++VP +P T L M + ++ + + ++ +
Sbjct: 44 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHH---- 99
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+L +N I ++ AF L + L N +T +P AF +LR +
Sbjct: 100 --LEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLREL 151
>gi|50086941|gb|AAT70351.1| variable lymphocyte receptor [Petromyzon marinus]
Length = 257
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 76/158 (48%), Gaps = 14/158 (8%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C K L VP +P T LRL N IT+L P F + L ++L
Sbjct: 9 ACPSQCSCSGTHVNCERKRLTSVPAGIPTTTKILRLYINQITKLEPGVFDSLTALTFLNL 68
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLS 215
NQ++ + F L +L L LN+N LT LP GVF +L +L+ L + +N
Sbjct: 69 GNNQLTALPEGVFDHLVNLQKLWLNSNQLTSLPAGVFDKLTQLKELGLDQNQL------- 121
Query: 216 WLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFK 253
+ G++ + H+ + + D+PE F+
Sbjct: 122 -------KSISAGMFDRVLQELHLSSKQLTDLPEGGFE 152
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTEL-TYMVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ V+C K L VP +P T L Y+ I +++ + S + F
Sbjct: 9 ACPSQCSCSGTHVNCERKRLTSVPAGIPTTTKILRLYINQITKLEPGVFDSLTALTF--- 65
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N +T LP F + L+++ L N +T LP F +L+ +
Sbjct: 66 ----LNLGNNQLTALPEGVFDHLVNLQKLWLNSNQLTSLPAGVFDKLTQLKEL 114
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 70/170 (41%), Gaps = 20/170 (11%)
Query: 100 PCRCADGIVDCREKGLNKVPI------LLPEATTELRLEQNDITELPPKAFANYKRLRRI 153
P D + +E GL++ + + EL L +T+LP F L+ +
Sbjct: 101 PAGVFDKLTQLKELGLDQNQLKSISAGMFDRVLQELHLSSKQLTDLPEGGFERLVNLKEL 160
Query: 154 DLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH 213
L +NQ+ + F L LT L L NN L +P G F L L + + N + C+C
Sbjct: 161 HLYRNQMKALPAGLFDELTQLTLLELQNNQLKSIPRGAFDNLKSLTHIYLFNNPWDCECS 220
Query: 214 -LSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETR 262
+ +L W+ ++ + P + G + KCSG++ R
Sbjct: 221 DILYLKNWIVQHASI------VNPGNYGGVD-------NVKCSGTNTPVR 257
>gi|76161907|gb|ABA40044.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 168
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 14/169 (8%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ + C E+ L VP+ +P T LRL N IT+L P F + +L ++L
Sbjct: 1 ACPSQCSCSGTDIHCHERSLRSVPVGIPTTTQILRLYINQITKLEPGVFDSLTQLTSLEL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ++ V V F L LT L + N L +P G F L L + + N + C+C +
Sbjct: 61 GGNQLTAVTVGVFDKLTKLTHLAPHINQLKSIPRGAFDNLKSLTHIWLYGNPWDCECSDI 120
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L W+ ++ + +++G +D KCSG++ R+
Sbjct: 121 LYLKNWIVQHASI---------VNLRGHGGVD----NVKCSGTNTPVRA 156
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ + C E+ L VP+ +P TT + I+++ K L + ++ + T
Sbjct: 1 ACPSQCSCSGTDIHCHERSLRSVPVGIP--TTTQILRLYINQITK--LEPGVFDSLTQLT 56
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
S L N +T + F +L + N + +P AF N K L +
Sbjct: 57 --SLELGGNQLTAVTVGVFDKLTKLTHLAPHINQLKSIPRGAFDNLKSLTHI 106
>gi|260789087|ref|XP_002589579.1| hypothetical protein BRAFLDRAFT_224740 [Branchiostoma floridae]
gi|229274759|gb|EEN45590.1| hypothetical protein BRAFLDRAFT_224740 [Branchiostoma floridae]
Length = 422
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 73/131 (55%), Gaps = 3/131 (2%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL L +N IT L + F + +L+R+ L+ NQ++ V D+F LK+LT + L+ NNLT L
Sbjct: 197 ELDLSRNSITVLTAENFESLPKLKRLLLTSNQLTGVEQDSFDDLKALTDVNLSYNNLTRL 256
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK---RYPRLGLYTKCFAPSHIKGQNI 244
P G+F ++ L+ + N + C C + WL +W++ R L KC P +G+ +
Sbjct: 257 PYGLFGKMTSLQEFDLRGNLWNCSCEVMWLVQWMRGNMRSDTRELCGKCVNPKSERGKFL 316
Query: 245 LDIPEHEFKCS 255
DI E CS
Sbjct: 317 CDIVPEEINCS 327
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Query: 96 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRI 153
SCP C C C ++ L +VP + + T L L +N++T L P A + L +
Sbjct: 20 SCPKGCTCTLMYQHTYCGDQSLKEVPAGISDKTKILILNRNNLTRLNPNALPDLPNLNTL 79
Query: 154 DLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFIC 210
DL+ N + + AF G+ +L +L L +N LT +P F L L+ L + N +C
Sbjct: 80 DLTDNSLKVIEDGAFNGVSNLETLELYHNRLTAVPSSAFKPLKNLQELGLGANPIVC 136
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK---RYPRLGLYTKCFA 61
L+ NNLT LP G+F ++ L+ + N + C C + WL +W++ R L KC
Sbjct: 248 LSYNNLTRLPYGLFGKMTSLQEFDLRGNLWNCSCEVMWLVQWMRGNMRSDTRELCGKCVN 307
Query: 62 PSHIKGQNILDIPEHEFKCSGP-VEKPTGECAAEPSCPHPCRCADG 106
P +G+ + DI E CS P + KP +C G
Sbjct: 308 PKSERGKFLCDIVPEEINCSVPRIAKPVDTVNVSVGDSAALKCKAG 353
>gi|158255564|dbj|BAF83753.1| unnamed protein product [Homo sapiens]
Length = 516
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP CRC + C +G + VP + + L L N ITEL FA++ +L
Sbjct: 29 ALGMACPPKCRCEKLLFYCDSQGFHSVPNATDKGSLGLSLRHNHITELERDQFASFSQLT 88
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICD 211
+ L NQIS V DAFQGL L L L++N + YLP+ F +L L+ L +S N
Sbjct: 89 WLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFN----- 143
Query: 212 CHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
LS LH P L + H++ ++ IP F
Sbjct: 144 -QLSSLH------PELFYGLRKLQTLHLRSNSLRTIPVRLF 177
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 107/258 (41%), Gaps = 24/258 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N + YLP+ F +L L+ L +S N LS LH P L + H
Sbjct: 116 LSSNKIFYLPNTTFTQLINLQNLDLSFN------QLSSLH------PELFYGLRKLQTLH 163
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL--------N 116
++ ++ IP F +E S G++ RE L N
Sbjct: 164 LRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLAR--NGFAGLIKLRELHLEHNQLTKIN 221
Query: 117 KVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
L + L L+ N I+ L + L ++DL+ N+I + + F+ + +L
Sbjct: 222 FAHFLRLSSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKI 281
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFA 235
L ++NN L L + L L T+ +S N + C + L WL + R G C +
Sbjct: 282 LLMDNNKLNSLDSKILNSLRSLTTVGLSGNLWECSARICALASWLGSFQGRWGHSILCHS 341
Query: 236 PSHIKGQNILDIPEHEFK 253
P H +G++ILD H F+
Sbjct: 342 PDHTQGEDILD-AVHGFQ 358
>gi|76161940|gb|ABA40060.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 168
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C K L VP +P T L L N IT+L P F L+++ L
Sbjct: 1 ACPSQCSCSGTEVNCAGKSLASVPAGIPTTTQYLYLLVNQITKLEPGVFDRLVNLQKLYL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
++NQ+ + F L LT L LNNN L +P G F L L + + N + C C +
Sbjct: 61 NQNQLLALPAGVFDKLTQLTYLDLNNNQLKSIPRGAFDNLKSLTHIFLYNNPWDCACSDI 120
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L RW+ ++P L L++ +CSG++ R+
Sbjct: 121 LYLSRWISQHPGLVF-------------GYLNLDPDSARCSGTNTPVRA 156
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C K L VP +P TT+ Y++ ++++ K+ F R
Sbjct: 1 ACPSQCSCSGTEVNCAGKSLASVPAGIP-TTTQYLYLL-VNQITKL-----EPGVFDRLV 53
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N + L QN + LP F +L + L N + +P AF N K L +
Sbjct: 54 NLQKLYLNQNQLLALPAGVFDKLTQLTYLDLNNNQLKSIPRGAFDNLKSLTHI 106
>gi|320164980|gb|EFW41879.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 769
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 112/308 (36%), Gaps = 66/308 (21%)
Query: 101 CRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQI 160
C C V+C+ + L ++P +P TT L L N IT LP AF + L + L NQI
Sbjct: 19 CFCGGSTVNCQSRNLTEIPSEIPVGTTSLSLYDNQITSLPASAFTSLTALVAVYLQDNQI 78
Query: 161 SKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW 220
+ V AF G+ +L L L NN LT + G FA L L +L ++ N L+ +
Sbjct: 79 TAVPASAFAGMTTLKQLHLANNQLTSISTGTFAGLTSLVSLYLAGNQITTI----PLNAF 134
Query: 221 LKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSC 280
+ +GL + I DIP F
Sbjct: 135 VDLTQLVGL--------ELNNNQITDIPASSFT--------------------------- 159
Query: 281 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLN--KVPILLPEATTELTYMVSIDRVDK 338
G+ + LN ++ IL A T LT + + +
Sbjct: 160 -----------------------GLSGMKRLTLNNNQITILSANAFTGLTALTEL-YLSS 195
Query: 339 VLLYSYISNNFKRWTNRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFA 397
+ S +N F + + L+ N IT + +F L + L N IT + AF
Sbjct: 196 NTITSISANAFTGLSALTMVELQFNQITSIASNSFTGLSSLIFLGLSSNRITSISDNAFT 255
Query: 398 NYKRLRRM 405
+L +
Sbjct: 256 GLTQLVSL 263
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 83/210 (39%), Gaps = 46/210 (21%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L NN LT + G FA L L +L ++ N L+ ++ +GL
Sbjct: 97 LANNQLTSISTGTFAGLTSLVSLYLAGNQITTI----PLNAFVDLTQLVGL--------E 144
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLN--KVPILL 122
+ I DIP F G+ + LN ++ IL
Sbjct: 145 LNNNQITDIPASSFT--------------------------GLSGMKRLTLNNNQITILS 178
Query: 123 PEA------TTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
A TEL L N IT + AF L ++L NQI+ +A ++F GL SL
Sbjct: 179 ANAFTGLTALTELYLSSNTITSISANAFTGLSALTMVELQFNQITSIASNSFTGLSSLIF 238
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
L L++N +T + D F L +L +L + N
Sbjct: 239 LGLSSNRITSISDNAFTGLTQLVSLTLFSN 268
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N IT + AF +L + L NQI+ ++ A G+ L LTL N T LP
Sbjct: 239 LGLSSNRITSISDNAFTGLTQLVSLTLFSNQITSISASALTGMPVLLQLTLTGNPFTTLP 298
Query: 189 DGVF 192
G+F
Sbjct: 299 PGLF 302
>gi|291393973|ref|XP_002713470.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains 1
[Oryctolagus cuniculus]
Length = 1066
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 109/258 (42%), Gaps = 18/258 (6%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L NN++ L DG F L R+ L + NS + + + L+ L +L L + H
Sbjct: 243 LQRNNISKLTDGAFWGLSRMHVLHLEYNSLV-EVNSGSLY-GLTALHQLHLSNNSISRIH 300
Query: 65 IKG----QNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
G Q + ++ + E+ E ++ I + KGL + +
Sbjct: 301 RDGWSFCQKLHELILSFNNLTRLDEESLAELSSLSVLRLSHNAISHIAEGAFKGLKNLRV 360
Query: 121 LLPEATTELRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSL 177
L L+ N+I E AF L ++ L N+I VA AF GL++L L
Sbjct: 361 L--------DLDHNEIAGTIEDTSGAFMGLDHLSKLTLFGNKIKSVAKRAFSGLEALEHL 412
Query: 178 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTK-CFAP 236
L N + + FA++ L+ L IS SF+CDC L WL WL L T C P
Sbjct: 413 NLGENAIRSVQLDAFAKMKNLKELHISSESFLCDCQLKWLPPWLVSRTLQALVTATCAHP 472
Query: 237 SHIKGQNILDIPEHEFKC 254
+KGQ+I +P F C
Sbjct: 473 ESLKGQSIFSVPPESFVC 490
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 133 QNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
+N IT+LP KAF RL ++DL++N+I + FQGL SL L L NN++ L DG F
Sbjct: 198 KNRITQLPVKAF-KLPRLTQLDLNRNRIRLIEGLTFQGLDSLEVLKLQRNNISKLTDGAF 256
Query: 193 AELFRLRTLRISENSFI 209
L R+ L + NS +
Sbjct: 257 WGLSRMHVLHLEYNSLV 273
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 85 EKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAF 144
E T C C CA +DC +GL +P LP T L L N ++E+ P F
Sbjct: 30 EPATAAAGPREPCAAACTCAGDSLDCGGRGLAALPGDLPAWTRSLNLSYNKLSEIDPAVF 89
Query: 145 ANYKRLRRIDLSKNQISKV 163
+ L+ + L+ N+++ +
Sbjct: 90 EDLPNLQEVYLNNNELTAI 108
>gi|15029530|ref|NP_071426.1| leucine-rich repeat-containing protein 4 precursor [Homo sapiens]
gi|114615805|ref|XP_001151502.1| PREDICTED: leucine-rich repeat-containing protein 4 isoform 3 [Pan
troglodytes]
gi|114615807|ref|XP_001151566.1| PREDICTED: leucine-rich repeat-containing protein 4 isoform 4 [Pan
troglodytes]
gi|397468874|ref|XP_003806095.1| PREDICTED: leucine-rich repeat-containing protein 4 [Pan paniscus]
gi|51701696|sp|Q9HBW1.2|LRRC4_HUMAN RecName: Full=Leucine-rich repeat-containing protein 4; AltName:
Full=Brain tumor-associated protein BAG; AltName:
Full=Nasopharyngeal carcinoma-associated gene 14
protein; AltName: Full=Netrin-G2 ligand; Short=NGL-2;
Flags: Precursor
gi|14495561|gb|AAG28019.2|AF196976_1 brain tumor associated protein LRRC4 [Homo sapiens]
gi|37181734|gb|AAQ88674.1| NAG14 [Homo sapiens]
gi|51095073|gb|EAL24316.1| leucine rich repeat containing 4 [Homo sapiens]
gi|109730239|gb|AAI11746.1| Leucine rich repeat containing 4 [Homo sapiens]
gi|109730363|gb|AAI11562.1| Leucine rich repeat containing 4 [Homo sapiens]
gi|119604045|gb|EAW83639.1| leucine rich repeat containing 4 [Homo sapiens]
gi|189054236|dbj|BAG36756.1| unnamed protein product [Homo sapiens]
gi|306921321|dbj|BAJ17740.1| leucine rich repeat containing 4 [synthetic construct]
gi|410249590|gb|JAA12762.1| leucine rich repeat containing 4 [Pan troglodytes]
Length = 653
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 2/131 (1%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL + N E+ P +F L+++ + +Q+S + +AF GL SL L L +NNL+ L
Sbjct: 222 ELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSL 281
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAPSHIKGQNIL 245
P +F L L L + N + CDC + WL WL+ Y +C AP H++G+ ++
Sbjct: 282 PHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAPMHMRGRYLV 341
Query: 246 DIPEHEFKCSG 256
++ + F+CS
Sbjct: 342 EVDQASFQCSA 352
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 96 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRI 153
+CP C C++ V C +GL++VP +P T L L +N+I + F + L +
Sbjct: 45 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVL 104
Query: 154 DLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
L +N I ++ V AF GL SL +L L +N LT +P G F L +LR L + N
Sbjct: 105 QLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNN 157
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAP 62
L +NNL+ LP +F L L L + N + CDC + WL WL+ Y +C AP
Sbjct: 273 LAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAP 332
Query: 63 SHIKGQNILDIPEHEFKCSGP--VEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
H++G+ ++++ + F+CS P ++ P +E R A+ + CR ++ V
Sbjct: 333 MHMRGRYLVEVDQASFQCSAPFIMDAPRDLNISE------GRMAE--LKCRTPPMSSVKW 384
Query: 121 LLPEATT 127
LLP T
Sbjct: 385 LLPNGTV 391
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 294 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
+CP C C++ V C +GL++VP +P T L M + ++ + + ++ +
Sbjct: 45 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHH---- 100
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+L +N I ++ AF L + L N +T +P AF +LR +
Sbjct: 101 --LEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLREL 152
>gi|81175394|gb|ABB59036.1| variable lymphocyte receptor B [Eptatretus stoutii]
Length = 248
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C KGL VP + TT L L+ N + +P F +L + +
Sbjct: 23 ACPSRCSCSGTEVGCDSKGLTSVPTGISARTTGLYLDDNTLQSIPSGVFDKLTQLTMLSV 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
S NQ+ + F L LT+L L+ N L +PDG+F L L+T+ + N + C C +
Sbjct: 83 SINQLQSLPHGVFDKLTKLTTLALSTNQLKSVPDGIFDRLTSLQTINLYSNPWDCTCPGI 142
Query: 215 SWLHRWLKR 223
+L RW ++
Sbjct: 143 DYLSRWSQK 151
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 44/113 (38%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V C KGL VP + TT L +D L S S F + T
Sbjct: 23 ACPSRCSCSGTEVGCDSKGLTSVPTGISARTTGL-------YLDDNTLQSIPSGVFDKLT 75
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + N + LP F +L + L N + +P F L+ +
Sbjct: 76 QLTMLSVSINQLQSLPHGVFDKLTKLTTLALSTNQLKSVPDGIFDRLTSLQTI 128
>gi|403256866|ref|XP_003921067.1| PREDICTED: leucine-rich repeat-containing protein 4 [Saimiri
boliviensis boliviensis]
Length = 653
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 2/131 (1%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL + N E+ P +F L+++ + +Q+S + +AF GL SL L L +NNL+ L
Sbjct: 222 ELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSL 281
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAPSHIKGQNIL 245
P +F L L L + N + CDC + WL WL+ Y +C AP H++G+ ++
Sbjct: 282 PHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAPMHMRGRYLV 341
Query: 246 DIPEHEFKCSG 256
++ + F+CS
Sbjct: 342 EVDQASFQCSA 352
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 96 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRI 153
+CP C C++ V C +GL++VP +P T L L +N+I + F + L +
Sbjct: 45 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVL 104
Query: 154 DLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
L +N I ++ V AF GL SL +L L +N LT +P G F L +LR L + N
Sbjct: 105 QLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNN 157
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAP 62
L +NNL+ LP +F L L L + N + CDC + WL WL+ Y +C AP
Sbjct: 273 LAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAP 332
Query: 63 SHIKGQNILDIPEHEFKCSGP--VEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
H++G+ ++++ + F+CS P ++ P +E R A+ + CR ++ V
Sbjct: 333 MHMRGRYLVEVDQASFQCSAPFIMDAPRDLNISE------GRMAE--LKCRTPPMSSVKW 384
Query: 121 LLPEATT 127
LLP T
Sbjct: 385 LLPNGTV 391
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 294 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
+CP C C++ V C +GL++VP +P T L M + ++ + + ++ +
Sbjct: 45 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHH---- 100
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+L +N I ++ AF L + L N +T +P AF +LR +
Sbjct: 101 --LEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLREL 152
>gi|348578889|ref|XP_003475214.1| PREDICTED: leucine-rich repeat-containing protein 4-like [Cavia
porcellus]
Length = 652
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 2/131 (1%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL + N E+ P +F L+++ + +Q+S + +AF GL SL L L +NNL+ L
Sbjct: 221 ELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSL 280
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAPSHIKGQNIL 245
P +F L L L + N + CDC + WL WL+ Y +C AP H++G+ ++
Sbjct: 281 PHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAPMHMRGRYLV 340
Query: 246 DIPEHEFKCSG 256
++ + F+CS
Sbjct: 341 EVDQASFQCSA 351
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 96 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRI 153
+CP C C++ V C +GL++VP +P T L L +N+I + F + L +
Sbjct: 44 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVL 103
Query: 154 DLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
L +N I ++ V AF GL SL +L L +N LT +P G F L +LR L + N
Sbjct: 104 QLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNN 156
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAP 62
L +NNL+ LP +F L L L + N + CDC + WL WL+ Y +C AP
Sbjct: 272 LAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAP 331
Query: 63 SHIKGQNILDIPEHEFKCSGP--VEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
H++G+ ++++ + F+CS P ++ P +E R A+ + CR ++ V
Sbjct: 332 MHMRGRYLVEVDQASFQCSAPFIMDAPRDLNISE------GRMAE--LKCRTPPMSSVKW 383
Query: 121 LLPEATT 127
LLP T
Sbjct: 384 LLPNGTV 390
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 294 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
+CP C C++ V C +GL++VP +P T L M + ++ + + ++ +
Sbjct: 44 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHH---- 99
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+L +N I ++ AF L + L N +T +P AF +LR +
Sbjct: 100 --LEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLREL 151
>gi|297676107|ref|XP_002815987.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 2
isoform 1 [Pongo abelii]
Length = 516
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP CRC + C +G + VP + + L L N ITEL FA++ +L
Sbjct: 29 ALGMACPPKCRCEKLLFYCDSQGFHSVPNATDKGSLGLSLRHNHITELERDQFASFSQLT 88
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICD 211
+ L NQIS V DAFQGL L L L++N + YLP+ F +L L+ L +S N
Sbjct: 89 WLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFN----- 143
Query: 212 CHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
LS LH P L + H++ ++ IP F
Sbjct: 144 -QLSSLH------PELFYGLRKLQTLHLRSNSLRTIPVRLF 177
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 106/258 (41%), Gaps = 24/258 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N + YLP+ F +L L+ L +S N LS LH P L + H
Sbjct: 116 LSSNKIFYLPNTTFTQLINLQNLDLSFN------QLSSLH------PELFYGLRKLQTLH 163
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL--------N 116
++ ++ IP F +E S G++ RE L N
Sbjct: 164 LRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLAR--NGFAGLIKLRELHLEHNQLTKIN 221
Query: 117 KVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
L + L L+ N I+ L + L ++DL+ N+I + + F+ + +L
Sbjct: 222 FAHFLRLSSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKI 281
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFA 235
L ++NN L L + L L T+ +S N + C + L WL + R C +
Sbjct: 282 LLMDNNKLNSLDSKILNSLRSLTTVGLSGNLWECSARICALASWLGSFQGRWEHSILCHS 341
Query: 236 PSHIKGQNILDIPEHEFK 253
P H +G++ILD H F+
Sbjct: 342 PDHTQGEDILD-AVHGFQ 358
>gi|7662102|ref|NP_056379.1| leucine-rich repeat transmembrane neuronal protein 2 precursor
[Homo sapiens]
gi|388453549|ref|NP_001253533.1| leucine-rich repeat transmembrane neuronal protein 2 precursor
[Macaca mulatta]
gi|114602047|ref|XP_001172386.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 2
isoform 2 [Pan troglodytes]
gi|332234600|ref|XP_003266493.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 2
[Nomascus leucogenys]
gi|397518157|ref|XP_003829262.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 2
[Pan paniscus]
gi|402872648|ref|XP_003900218.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 2
[Papio anubis]
gi|426350145|ref|XP_004042642.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 2
[Gorilla gorilla gorilla]
gi|50400808|sp|O43300.3|LRRT2_HUMAN RecName: Full=Leucine-rich repeat transmembrane neuronal protein 2;
AltName: Full=Leucine-rich repeat neuronal 2 protein;
Flags: Precursor
gi|29540620|gb|AAO67547.1| leucine-rich repeat transmembrane neuronal 2 protein [Homo sapiens]
gi|116496895|gb|AAI26409.1| Leucine rich repeat transmembrane neuronal 2 [Homo sapiens]
gi|116497219|gb|AAI26411.1| Leucine rich repeat transmembrane neuronal 2 [Homo sapiens]
gi|119582529|gb|EAW62125.1| leucine rich repeat transmembrane neuronal 2 [Homo sapiens]
gi|168267354|dbj|BAG09733.1| leucine-rich repeat transmembrane neuronal protein 2 precursor
[synthetic construct]
gi|219518062|gb|AAI43927.1| Leucine rich repeat transmembrane neuronal 2 [Homo sapiens]
gi|313883124|gb|ADR83048.1| leucine rich repeat transmembrane neuronal 2 [synthetic construct]
gi|380811582|gb|AFE77666.1| leucine-rich repeat transmembrane neuronal protein 2 precursor
[Macaca mulatta]
gi|410265058|gb|JAA20495.1| leucine rich repeat transmembrane neuronal 2 [Pan troglodytes]
gi|410348552|gb|JAA40880.1| leucine rich repeat transmembrane neuronal 2 [Pan troglodytes]
Length = 516
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP CRC + C +G + VP + + L L N ITEL FA++ +L
Sbjct: 29 ALGMACPPKCRCEKLLFYCDSQGFHSVPNATDKGSLGLSLRHNHITELERDQFASFSQLT 88
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICD 211
+ L NQIS V DAFQGL L L L++N + YLP+ F +L L+ L +S N
Sbjct: 89 WLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFN----- 143
Query: 212 CHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
LS LH P L + H++ ++ IP F
Sbjct: 144 -QLSSLH------PELFYGLRKLQTLHLRSNSLRTIPVRLF 177
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 106/258 (41%), Gaps = 24/258 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N + YLP+ F +L L+ L +S N LS LH P L + H
Sbjct: 116 LSSNKIFYLPNTTFTQLINLQNLDLSFN------QLSSLH------PELFYGLRKLQTLH 163
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL--------N 116
++ ++ IP F +E S G++ RE L N
Sbjct: 164 LRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLAR--NGFAGLIKLRELHLEHNQLTKIN 221
Query: 117 KVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
L + L L+ N I+ L + L ++DL+ N+I + + F+ + +L
Sbjct: 222 FAHFLRLSSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKI 281
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFA 235
L ++NN L L + L L T+ +S N + C + L WL + R C +
Sbjct: 282 LLMDNNKLNSLDSKILNSLRSLTTVGLSGNLWECSARICALASWLGSFQGRWEHSILCHS 341
Query: 236 PSHIKGQNILDIPEHEFK 253
P H +G++ILD H F+
Sbjct: 342 PDHTQGEDILD-AVHGFQ 358
>gi|395817490|ref|XP_003782203.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 2
[Otolemur garnettii]
Length = 516
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP CRC + C +G + VP + + L L N ITEL FA++ +L
Sbjct: 29 ALGMACPPKCRCEKLLFYCDSQGFHSVPNATDKGSLGLSLRHNHITELERDQFASFSQLT 88
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICD 211
+ L NQIS V DAFQGL L L L++N + YLP+ F +L L+ L +S N
Sbjct: 89 WLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFN----- 143
Query: 212 CHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
LS LH P L + H++ ++ IP F
Sbjct: 144 -QLSSLH------PELFYGLRKLQTLHLRSNSLRTIPVRLF 177
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 24/258 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N + YLP+ F +L L+ L +S N LS LH P L + H
Sbjct: 116 LSSNKIFYLPNTTFTQLINLQNLDLSFN------QLSSLH------PELFYGLRKLQTLH 163
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL--------N 116
++ ++ IP F +E S G++ RE L N
Sbjct: 164 LRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLAR--NGFAGLIKLRELHLEHNQLTKIN 221
Query: 117 KVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
L + L L+ N I+ L + L ++DL+ N+I + + F+ + +L
Sbjct: 222 FAHFLRLSSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKI 281
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFA 235
L ++NN L L + + L L T+ +S N + C + L WL + R C +
Sbjct: 282 LLMDNNKLNSLDSKILSSLRSLTTVGLSGNLWECSTRICALASWLGSFQGRWEHSILCHS 341
Query: 236 PSHIKGQNILDIPEHEFK 253
P H +G++ILD H F+
Sbjct: 342 PDHTQGEDILD-AVHGFQ 358
>gi|81175418|gb|ABB59047.1| variable lymphocyte receptor B [Eptatretus stoutii]
Length = 260
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 76/171 (44%), Gaps = 12/171 (7%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C+ K L VP +P +TT+L L N + LP F L + L
Sbjct: 23 ACPSRCSCSGTTVNCQSKSLTSVPSGIPSSTTKLYLCCNKLQSLPDGVFDKLTSLTHLGL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
N++ + F L L L+L NN L +PDG+F L L+ + + +N + C C +
Sbjct: 83 QNNKLQSLPNGVFDKLTKLAGLSLENNQLKSVPDGIFDRLTSLQHIWLHDNPWDCSCPGI 142
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKI 265
+L RW++ +K KCSGS RS I
Sbjct: 143 DYLSRWIQT-----------NSVKVKTSGSYSTDPDSAKCSGSGKPVRSII 182
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C+ K L VP +P +TT+L + L S F + T
Sbjct: 23 ACPSRCSCSGTTVNCQSKSLTSVPSGIPSSTTKLYLCCNK-------LQSLPDGVFDKLT 75
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L+ N + LP F +L + LE N + +P F L+ +
Sbjct: 76 SLTHLGLQNNKLQSLPNGVFDKLTKLAGLSLENNQLKSVPDGIFDRLTSLQHI 128
>gi|40788250|dbj|BAA24846.2| KIAA0416 [Homo sapiens]
Length = 529
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP CRC + C +G + VP + + L L N ITEL FA++ +L
Sbjct: 42 ALGMACPPKCRCEKLLFYCDSQGFHSVPNATDKGSLGLSLRHNHITELERDQFASFSQLT 101
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICD 211
+ L NQIS V DAFQGL L L L++N + YLP+ F +L L+ L +S N
Sbjct: 102 WLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFN----- 156
Query: 212 CHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
LS LH P L + H++ ++ IP F
Sbjct: 157 -QLSSLH------PELFYGLRKLQTLHLRSNSLRTIPVRLF 190
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 106/258 (41%), Gaps = 24/258 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N + YLP+ F +L L+ L +S N LS LH P L + H
Sbjct: 129 LSSNKIFYLPNTTFTQLINLQNLDLSFN------QLSSLH------PELFYGLRKLQTLH 176
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL--------N 116
++ ++ IP F +E S G++ RE L N
Sbjct: 177 LRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLAR--NGFAGLIKLRELHLEHNQLTKIN 234
Query: 117 KVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
L + L L+ N I+ L + L ++DL+ N+I + + F+ + +L
Sbjct: 235 FAHFLRLSSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKI 294
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFA 235
L ++NN L L + L L T+ +S N + C + L WL + R C +
Sbjct: 295 LLMDNNKLNSLDSKILNSLRSLTTVGLSGNLWECSARICALASWLGSFQGRWEHSILCHS 354
Query: 236 PSHIKGQNILDIPEHEFK 253
P H +G++ILD H F+
Sbjct: 355 PDHTQGEDILD-AVHGFQ 371
>gi|284010876|dbj|BAI66913.1| variable lymphocyte receptor B [Eptatretus burgeri]
Length = 201
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 73/171 (42%), Gaps = 20/171 (11%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C KGL VP + TT L L N + LP F +L+ + L
Sbjct: 23 ACPSRCSCSGTKVLCYSKGLTSVPTGISARTTYLDLHTNQLKSLPNGVFDKLTQLKELHL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
NQ+ + F L L L L N L +PDGVF L L+T+ +S N + C C +
Sbjct: 83 YNNQLQSLPSGVFDKLTELKELRLYENQLKSVPDGVFDRLTSLQTIYLSSNPWDCTCPGV 142
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKI 265
+L RWL+ P Y KCSGS RS I
Sbjct: 143 DYLSRWLQNNPNKEKY-------------------DSAKCSGSGKPVRSII 174
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 45/113 (39%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V C KGL VP + TT L + L S + F + T
Sbjct: 23 ACPSRCSCSGTKVLCYSKGLTSVPTGISARTTYLDLHTN-------QLKSLPNGVFDKLT 75
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L N + LP F L+ +RL +N + +P F L+ +
Sbjct: 76 QLKELHLYNNQLQSLPSGVFDKLTELKELRLYENQLKSVPDGVFDRLTSLQTI 128
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HLSWLHRWLKRYP 51
L N L +PDGVF L L+T+ +S N + C C + +L RWL+ P
Sbjct: 106 LYENQLKSVPDGVFDRLTSLQTIYLSSNPWDCTCPGVDYLSRWLQNNP 153
>gi|388453649|ref|NP_001253800.1| leucine-rich repeat-containing protein 4 [Macaca mulatta]
gi|332224360|ref|XP_003261335.1| PREDICTED: leucine-rich repeat-containing protein 4 isoform 1
[Nomascus leucogenys]
gi|332224362|ref|XP_003261336.1| PREDICTED: leucine-rich repeat-containing protein 4 isoform 2
[Nomascus leucogenys]
gi|402864707|ref|XP_003896593.1| PREDICTED: leucine-rich repeat-containing protein 4 isoform 1
[Papio anubis]
gi|402864709|ref|XP_003896594.1| PREDICTED: leucine-rich repeat-containing protein 4 isoform 2
[Papio anubis]
gi|380815512|gb|AFE79630.1| leucine-rich repeat-containing protein 4 precursor [Macaca mulatta]
Length = 653
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 2/131 (1%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL + N E+ P +F L+++ + +Q+S + +AF GL SL L L +NNL+ L
Sbjct: 222 ELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSL 281
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAPSHIKGQNIL 245
P +F L L L + N + CDC + WL WL+ Y +C AP H++G+ ++
Sbjct: 282 PHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAPMHMRGRYLV 341
Query: 246 DIPEHEFKCSG 256
++ + F+CS
Sbjct: 342 EVDQASFQCSA 352
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 96 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRI 153
+CP C C++ V C +GL++VP +P T L L +N+I + F + L +
Sbjct: 45 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVL 104
Query: 154 DLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
L +N I ++ V AF GL SL +L L +N LT +P G F L +LR L + N
Sbjct: 105 QLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNN 157
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAP 62
L +NNL+ LP +F L L L + N + CDC + WL WL+ Y +C AP
Sbjct: 273 LAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAP 332
Query: 63 SHIKGQNILDIPEHEFKCSGP--VEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
H++G+ ++++ + F+CS P ++ P +E R A+ + CR ++ V
Sbjct: 333 MHMRGRYLVEVDQASFQCSAPFIMDAPRDLNISE------GRMAE--LKCRTPPMSSVKW 384
Query: 121 LLPEATT 127
LLP T
Sbjct: 385 LLPNGTV 391
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 294 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
+CP C C++ V C +GL++VP +P T L M + ++ + + ++ +
Sbjct: 45 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHH---- 100
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+L +N I ++ AF L + L N +T +P AF +LR +
Sbjct: 101 --LEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLREL 152
>gi|426357772|ref|XP_004046206.1| PREDICTED: leucine-rich repeat-containing protein 4 isoform 1
[Gorilla gorilla gorilla]
gi|426357774|ref|XP_004046207.1| PREDICTED: leucine-rich repeat-containing protein 4 isoform 2
[Gorilla gorilla gorilla]
Length = 653
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 2/131 (1%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL + N E+ P +F L+++ + +Q+S + +AF GL SL L L +NNL+ L
Sbjct: 222 ELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSL 281
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAPSHIKGQNIL 245
P +F L L L + N + CDC + WL WL+ Y +C AP H++G+ ++
Sbjct: 282 PHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAPMHMRGRYLV 341
Query: 246 DIPEHEFKCSG 256
++ + F+CS
Sbjct: 342 EVDQASFQCSA 352
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 96 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRI 153
+CP C C++ V C +GL++VP +P T L L +N+I + F + L +
Sbjct: 45 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVL 104
Query: 154 DLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
L +N I ++ V AF GL SL +L L +N LT +P G F L +LR L + N
Sbjct: 105 QLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNN 157
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAP 62
L +NNL+ LP +F L L L + N + CDC + WL WL+ Y +C AP
Sbjct: 273 LAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAP 332
Query: 63 SHIKGQNILDIPEHEFKCSGP--VEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
H++G+ ++++ + F+CS P ++ P +E R A+ + CR L+ V
Sbjct: 333 MHMRGRYLVEVDQASFQCSAPFIMDAPRDLNISE------GRMAE--LKCRTPPLSSVKW 384
Query: 121 LLPEATT 127
LLP T
Sbjct: 385 LLPNGTV 391
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 294 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
+CP C C++ V C +GL++VP +P T L M + ++ + + ++ +
Sbjct: 45 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHH---- 100
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+L +N I ++ AF L + L N +T +P AF +LR +
Sbjct: 101 --LEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLREL 152
>gi|70955622|gb|AAZ16372.1| variable lymphocyte receptor B [Eptatretus stoutii]
Length = 259
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 77/171 (45%), Gaps = 13/171 (7%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C ++ L VP P +TT L L N + LP F RL ++L
Sbjct: 23 ACPSRCSCSGTTVSCNDRSLTSVPSGFPASTTVLWLYSNKLQSLPHGVFDKLTRLTYLNL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
N++ + F L SLT L L N L +PDG+F L L+ + + N + C C +
Sbjct: 83 ESNKLQSIPSGVFDKLTSLTHLYLLKNQLKSVPDGIFDRLTSLQEIHLYSNPWDCTCPGI 142
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKI 265
+ W+ ++ + L G N ++ KCSGS RS I
Sbjct: 143 RYFSEWINKHSGVVL----------DGSN--NVHPDSAKCSGSGKPVRSII 181
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V C ++ L VP P +TT L ++ S L S F + T
Sbjct: 23 ACPSRCSCSGTTVSCNDRSLTSVPSGFPASTTVL-WLYSNK------LQSLPHGVFDKLT 75
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ LE N + +P F L + L +N + +P F L+ +
Sbjct: 76 RLTYLNLESNKLQSIPSGVFDKLTSLTHLYLLKNQLKSVPDGIFDRLTSLQEI 128
>gi|395833592|ref|XP_003789810.1| PREDICTED: leucine-rich repeat-containing protein 4 isoform 1
[Otolemur garnettii]
gi|395833594|ref|XP_003789811.1| PREDICTED: leucine-rich repeat-containing protein 4 isoform 2
[Otolemur garnettii]
Length = 653
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 2/131 (1%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL + N E+ P +F L+++ + +Q+S + +AF GL SL L L +NNL+ L
Sbjct: 222 ELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSL 281
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAPSHIKGQNIL 245
P +F L L L + N + CDC + WL WL+ Y +C AP H++G+ ++
Sbjct: 282 PHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAPMHMRGRYLV 341
Query: 246 DIPEHEFKCSG 256
++ + F+CS
Sbjct: 342 EVDQASFQCSA 352
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 96 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRI 153
+CP C C++ V C +GL++VP +P T L L +N+I + F + L +
Sbjct: 45 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVL 104
Query: 154 DLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
L +N I ++ V AF GL SL +L L +N LT +P G F L +LR L + N
Sbjct: 105 QLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNN 157
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAP 62
L +NNL+ LP +F L L L + N + CDC + WL WL+ Y +C AP
Sbjct: 273 LAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAP 332
Query: 63 SHIKGQNILDIPEHEFKCSGP--VEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
H++G+ ++++ + F+CS P ++ P +E R A+ + CR ++ V
Sbjct: 333 MHMRGRYLVEVDQASFQCSAPFIMDAPRDLNISE------GRIAE--LKCRTPPMSSVKW 384
Query: 121 LLPEATT 127
+LP T
Sbjct: 385 MLPNGTV 391
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 294 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
+CP C C++ V C +GL++VP +P T L M + ++ + + ++ +
Sbjct: 45 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHH---- 100
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+L +N I ++ AF L + L N +T +P AF +LR +
Sbjct: 101 --LEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLREL 152
>gi|297681424|ref|XP_002818454.1| PREDICTED: leucine-rich repeat-containing protein 4 isoform 2
[Pongo abelii]
Length = 653
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 2/131 (1%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL + N E+ P +F L+++ + +Q+S + +AF GL SL L L +NNL+ L
Sbjct: 222 ELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSL 281
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAPSHIKGQNIL 245
P +F L L L + N + CDC + WL WL+ Y +C AP H++G+ ++
Sbjct: 282 PHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAPMHMRGRYLV 341
Query: 246 DIPEHEFKCSG 256
++ + F+CS
Sbjct: 342 EVDQASFQCSA 352
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 96 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRI 153
+CP C C++ V C +GL++VP +P T L L +N+I + F + L +
Sbjct: 45 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVL 104
Query: 154 DLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
L +N I ++ V AF GL SL +L L +N LT +P G F L +LR L + N
Sbjct: 105 QLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNN 157
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 14/128 (10%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAP 62
L +NNL+ LP +F L L L + N + CDC + WL WL+ Y +C AP
Sbjct: 273 LAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAP 332
Query: 63 SHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADG-IVD--CREKGLNKVP 119
H++G+ ++++ + F+CS P P ++G +V+ CR ++ V
Sbjct: 333 MHMRGRYLVEVDQASFQCSAPFIM---------DAPRDLNISEGRMVELKCRTPPMSSVK 383
Query: 120 ILLPEATT 127
LLP T
Sbjct: 384 WLLPNGTV 391
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 294 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
+CP C C++ V C +GL++VP +P T L M + ++ + + ++ +
Sbjct: 45 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHH---- 100
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+L +N I ++ AF L + L N +T +P AF +LR +
Sbjct: 101 --LEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLREL 152
>gi|449481948|ref|XP_004175970.1| PREDICTED: LOW QUALITY PROTEIN: chondroadherin-like protein
[Taeniopygia guttata]
Length = 632
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 95/215 (44%), Gaps = 16/215 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L N L LP AE RL + + N +C C L H+WL R R+ C AP
Sbjct: 170 LQENQLQGLPPLAGAE--RLVRVSLDGNPLLCSCLLRPFHKWLTRA-RVHAEGACTAPPA 226
Query: 65 IKGQNILDIPEHEFKCS---------GPVEKPTGECAAEPSCPHPCRCADGI--VDCREK 113
++G+++ + E +CS P E+P + CP C C+ C +
Sbjct: 227 LRGRSLNSLKSPEMRCSQLWPAPSTTAPPEQP--HSGSSRQCPWGCLCSPDFHHGSCENR 284
Query: 114 GLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKS 173
L ++P PE T L L +N +PP AF K L + L + I ++ A +GL S
Sbjct: 285 DLREIPRDFPEDTRLLDLRRNPFMTVPPDAFPGLKELVSLHLQRCSIRELHPGALRGLAS 344
Query: 174 LTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
L L L +N+L+ L F +L L + N+F
Sbjct: 345 LIYLYLTDNHLSTLAAAAFEGAPQLAYLDLDHNAF 379
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 128/377 (33%), Gaps = 116/377 (30%)
Query: 93 AEPSCPHPCRCAD--GIVDCREKGLNKVPILLPEATTELRL------------------- 131
A CP PC C + V C + +P +PE T +L L
Sbjct: 18 AAARCPAPCVCDNLRAYVLCVNGSMTAIPDAIPELTRKLDLRGNSFMVIPAXAFLATPYL 77
Query: 132 ----------------------EQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ 169
N++ LP +A A R+DL N I+ VA +A
Sbjct: 78 THLDLQRCKWKGWRKGXFRGLGSHNELQALPGEALARLDGATRLDLGHNPITYVAEEAL- 136
Query: 170 GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENS---------------------- 207
+ SL+ L L++ +L + FA +LR L + EN
Sbjct: 137 AMASLSHLFLDHASLQDVAPNAFARSPQLRILDLQENQLQGLPPLAGAERLVRVSLDGNP 196
Query: 208 FICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYR 267
+C C L H+WL R R+ C AP ++G+++ + E +C S+++
Sbjct: 197 LLCSCLLRPFHKWLTRA-RVHAEGACTAPPALRGRSLNSLKSPEMRC--------SQLWP 247
Query: 268 EECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI--VDCREKGLNKVPILLPEATT 325
P + P E+P + CP C C+ C + L ++P PE T
Sbjct: 248 A-------PSTTAPPEQP--HSGSSRQCPWGCLCSPDFHHGSCENRDLREIPRDFPEDT- 297
Query: 326 ELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQ 385
R L +N +PP AF K L + L++
Sbjct: 298 -----------------------------RLLDLRRNPFMTVPPDAFPGLKELVSLHLQR 328
Query: 386 NDITELPPKAFANYKRL 402
I EL P A L
Sbjct: 329 CSIRELHPGALRGLASL 345
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 58/141 (41%), Gaps = 25/141 (17%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL-KSLTSLTLNNNNLTY 186
+L+LE N ++E+P A L + LS+N I + F + SL L L+N L +
Sbjct: 443 KLQLEGNHLSEVPTAALGGLPTLSELKLSRNPIKHMGDSVFLPVASSLQHLYLDNMGLEW 502
Query: 187 LPDGVFAELF-RLRTLRISENS----------------------FICDCHLSWLHRWLKR 223
+ F +L +R+L + N F CDC L L RW+ +
Sbjct: 503 ISPHAFTDLGPXIRSLYLESNKMSTXPDMSNFTGLEILNLHDVPFHCDCQLLPLSRWINK 562
Query: 224 YPRLGLYTKCFAPSHIKGQNI 244
L + C +P +G +
Sbjct: 563 L-NLCVGATCASPPEAQGLKV 582
>gi|82617655|ref|NP_001032413.1| leucine-rich repeat-containing protein 4 precursor [Rattus
norvegicus]
gi|123792358|sp|Q45R42.1|LRRC4_RAT RecName: Full=Leucine-rich repeat-containing protein 4; AltName:
Full=Netrin-G2 ligand; Short=NGL-2; Flags: Precursor
gi|71089862|gb|AAZ23788.1| leucine rich repeat containing 4 protein precursor [Rattus
norvegicus]
gi|149065125|gb|EDM15201.1| leucine rich repeat containing 4 protein precursor [Rattus
norvegicus]
Length = 652
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 2/131 (1%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL + N E+ P +F L+++ + +Q+S + +AF GL SL L L +NNL+ L
Sbjct: 221 ELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSL 280
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAPSHIKGQNIL 245
P +F L L L + N + CDC + WL WL+ Y +C AP H++G+ ++
Sbjct: 281 PHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAPMHMRGRYLV 340
Query: 246 DIPEHEFKCSG 256
++ + F+CS
Sbjct: 341 EVDQASFQCSA 351
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 96 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRI 153
+CP C C++ V C +GL++VP +P T L L +N+I + F + L +
Sbjct: 44 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVL 103
Query: 154 DLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
L +N I ++ V AF GL SL +L L +N LT +P G F L +LR L + N
Sbjct: 104 QLGRNAIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNN 156
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAP 62
L +NNL+ LP +F L L L + N + CDC + WL WL+ Y +C AP
Sbjct: 272 LAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAP 331
Query: 63 SHIKGQNILDIPEHEFKCSGP--VEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
H++G+ ++++ + F+CS P ++ P +E R A+ + CR ++ V
Sbjct: 332 MHMRGRYLVEVDQASFQCSAPFIMDAPRDLNISED------RMAE--LKCRTPPMSSVKW 383
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRID 154
LLP T ++ + N+ R+ ID
Sbjct: 384 LLPNGTVLSHASRHPRISVLNDGTLNFSRVLLID 417
Score = 37.7 bits (86), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 294 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
+CP C C++ V C +GL++VP +P T L M + ++ + + ++ +
Sbjct: 44 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHH---- 99
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+L +N I ++ AF L + L N +T +P AF +LR +
Sbjct: 100 --LEVLQLGRNAIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLREL 151
>gi|326928297|ref|XP_003210317.1| PREDICTED: slit homolog 3 protein-like, partial [Meleagris
gallopavo]
Length = 182
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 2/143 (1%)
Query: 68 QNILDIPEHEFKCSGPVEKPTGECAAEP--SCPHPCRCADGIVDCREKGLNKVPILLPEA 125
Q I+ F C G + P CPH C C VDC GL VP +P
Sbjct: 24 QEIMSGGRSVFLCLGMILGFWSSMNWMPVGGCPHKCTCIASNVDCHGLGLKTVPRDIPRN 83
Query: 126 TTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLT 185
L LE+N+IT + F+ K LR + L +NQIS + AFQ LK L L LN N L
Sbjct: 84 AERLDLEKNNITRITKMDFSGLKNLRVLHLEENQISVIERGAFQDLKQLERLRLNKNKLQ 143
Query: 186 YLPDGVFAELFRLRTLRISENSF 208
LP+ +F +L L +SEN
Sbjct: 144 VLPELLFQNTQKLTRLDLSENQI 166
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 55/113 (48%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
CPH C C VDC GL VP +P L + I R+ K + +S + N
Sbjct: 54 GCPHKCTCIASNVDCHGLGLKTVPRDIPRNAERLDLEKNNITRITK-MDFSGLKNL---- 108
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R LE+N I+ + AF + K+L R+RL +N + LP F N ++L R+
Sbjct: 109 --RVLHLEENQISVIERGAFQDLKQLERLRLNKNKLQVLPELLFQNTQKLTRL 159
>gi|119928575|dbj|BAF43112.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 166
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 78/169 (46%), Gaps = 16/169 (9%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C K L VP +P T L L N T+L P F + L+ + L
Sbjct: 11 ACPARCSCSGTDVNCDGKRLASVPAAIPTTTQRLWLSNNQFTKLDPGVFDHLANLQHLYL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ+S + V F L LT L L NN L +P G F L L + +S N + C C +
Sbjct: 71 GDNQLSALPVGVFDKLTQLTHLVLYNNQLKSIPRGAFDNLKSLTYIWLSNNPWDCACSDI 130
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L WL ++ ++G +D + KCSG++ R+
Sbjct: 131 LYLSGWLAQH-----------AGKVQGNGGVD----DVKCSGTNTPVRA 164
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKV--LLYSYISNNFKR 351
+CP C C+ V+C K L VP +P T L +S ++ K+ ++ +++N
Sbjct: 11 ACPARCSCSGTDVNCDGKRLASVPAAIPTTTQRL--WLSNNQFTKLDPGVFDHLAN---- 64
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L N ++ LP F +L + L N + +P AF N K L +
Sbjct: 65 --LQHLYLGDNQLSALPVGVFDKLTQLTHLVLYNNQLKSIPRGAFDNLKSLTYI 116
>gi|76162372|gb|ABA40253.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 168
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 14/169 (8%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C++K L VP +P T L L N IT+L P F L+++ L
Sbjct: 1 ACPSQCSCSGTEVHCQKKSLASVPAGIPTTTQVLYLHTNQITKLEPGVFDRLVNLQKLYL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ+ + V F L + SL+LNNN L +P G F L L + + N + C+C +
Sbjct: 61 GSNQLGALPVGVFDELTQVYSLSLNNNQLKSIPRGAFDNLKSLTHIWLFNNPWDCECSDI 120
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L W+ ++ + ++ G +D KCSG++ R+
Sbjct: 121 LYLKNWIVQHASI---------VNLWGHGGVD----NVKCSGTNTPVRA 156
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V C++K L VP +P TT++ Y+ +++ K+ F R
Sbjct: 1 ACPSQCSCSGTEVHCQKKSLASVPAGIP-TTTQVLYL-HTNQITKLE-----PGVFDRLV 53
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N + L N + LP F ++ + L N + +P AF N K L +
Sbjct: 54 NLQKLYLGSNQLGALPVGVFDELTQVYSLSLNNNQLKSIPRGAFDNLKSLTHI 106
>gi|327271580|ref|XP_003220565.1| PREDICTED: leucine-rich repeat-containing G-protein coupled
receptor 6-like [Anolis carolinensis]
Length = 923
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 82/152 (53%), Gaps = 6/152 (3%)
Query: 60 FAPSHIKGQNILDIPEHEFKC-SGPVEKPTGECAAEPSCPHPCRCA-DGI---VDCREKG 114
AP+ ++ +L +P F C SG ++ + E A PSCP C C DGI VDC E
Sbjct: 2 LAPAGLRMDQLL-MPWWLFLCFSGTLKIVSLEQGAAPSCPPLCHCEEDGIMLSVDCSELV 60
Query: 115 LNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSL 174
L+ VP L T L L N+I+EL P F + + L + LS NQ+S++ +AF GL +L
Sbjct: 61 LSSVPNGLSPLTAYLDLSMNNISELLPGDFQHLRFLEELRLSGNQLSRIPREAFSGLYNL 120
Query: 175 TSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
L L NN L +P +L L++LR+ N
Sbjct: 121 KILMLQNNQLNRIPAEALWDLPNLQSLRLDAN 152
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 105/279 (37%), Gaps = 45/279 (16%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
L L+ N +TE+P KA N L+ + L+ N+I + AF+ L SL L L+NN + L
Sbjct: 170 HLWLDDNSLTEIPIKALNNLPALQAMTLALNKIWHIPDYAFENLTSLVVLHLHNNQIQSL 229
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDI 247
F L L TL ++ N + R L R LG + NI I
Sbjct: 230 GIHGFEGLHSLETLDLNYNELV---EFPIAIRTLGRLQELGFHNN----------NIKAI 276
Query: 248 PEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVD 307
PE F G+ + + R E + P G C PS +
Sbjct: 277 PEKAFD--GNPLLQIMTLTRAEIRS-----------LPRGMCQELPS-----------LR 312
Query: 308 CREKGLNKVPILLPEATTELTYMVSIDRV--DKVLLYSYISNNFKRWTN-RSRRLEQNDI 364
E N++ E Y ++ + ++ ++ F + T RS L N I
Sbjct: 313 VLELSHNQI-----EELPSFHYCQKLEEIGLQHNCIHEIGADTFGQLTALRSIDLSWNCI 367
Query: 365 TELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLR 403
+ +AFA L ++ L N + LP + L+
Sbjct: 368 QHIHTEAFATLNSLIKLDLTDNQLVTLPLAGLSRLTHLK 406
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 85/216 (39%), Gaps = 31/216 (14%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPR---LGLYTKCFA 61
L+ NN++ L G F L L LR+S N L R PR GLY
Sbjct: 77 LSMNNISELLPGDFQHLRFLEELRLSGNQ-------------LSRIPREAFSGLYNLKIL 123
Query: 62 P------SHIKGQNILDIPE-HEFKCSGPVEKPTGECAAE--PSCPHPCRCADGIVDCRE 112
+ I + + D+P + + E + E PS H + + +
Sbjct: 124 MLQNNQLNRIPAEALWDLPNLQSLRLDANLISVVPEKSFEGLPSLRHLWLDDNSLTEIPI 183
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLK 172
K LN +P A + L N I +P AF N L + L NQI + + F+GL
Sbjct: 184 KALNNLP-----ALQAMTLALNKIWHIPDYAFENLTSLVVLHLHNNQIQSLGIHGFEGLH 238
Query: 173 SLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
SL +L LN N L P + L RL+ L N+
Sbjct: 239 SLETLDLNYNELVEFPIAI-RTLGRLQELGFHNNNI 273
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 82/214 (38%), Gaps = 36/214 (16%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+NN + L F L L TL ++ N + R L R LG +
Sbjct: 221 LHNNQIQSLGIHGFEGLHSLETLDLNYNELV---EFPIAIRTLGRLQELGFHNN------ 271
Query: 65 IKGQNILDIPEHEFKCSGPVE-----------KPTGECAAEPSCPHPCRCADGIVDCREK 113
NI IPE F + ++ P G C PS +++
Sbjct: 272 ----NIKAIPEKAFDGNPLLQIMTLTRAEIRSLPRGMCQELPSLR--------VLELSHN 319
Query: 114 GLNKVPIL-LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLK 172
+ ++P + E+ L+ N I E+ F LR IDLS N I + +AF L
Sbjct: 320 QIEELPSFHYCQKLEEIGLQHNCIHEIGADTFGQLTALRSIDLSWNCIQHIHTEAFATLN 379
Query: 173 SLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
SL L L +N L LP A L RL L++ N
Sbjct: 380 SLIKLDLTDNQLVTLP---LAGLSRLTHLKLKGN 410
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 63/142 (44%), Gaps = 26/142 (18%)
Query: 288 ECAAEPSCPHPCRCA-DGI---VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYS 343
E A PSCP C C DGI VDC E L+ VP L T L +S++ + ++L
Sbjct: 32 EQGAAPSCPPLCHCEEDGIMLSVDCSELVLSSVPNGLSPLTAYLD--LSMNNISELLPGD 89
Query: 344 Y----------ISNN---------FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRL 383
+ +S N F N + L+ N + +P +A + L+ +RL
Sbjct: 90 FQHLRFLEELRLSGNQLSRIPREAFSGLYNLKILMLQNNQLNRIPAEALWDLPNLQSLRL 149
Query: 384 EQNDITELPPKAFANYKRLRRM 405
+ N I+ +P K+F LR +
Sbjct: 150 DANLISVVPEKSFEGLPSLRHL 171
>gi|296192870|ref|XP_002744256.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 2
[Callithrix jacchus]
Length = 516
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 76/161 (47%), Gaps = 12/161 (7%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP CRC + C +G VP + + L L N ITEL FA++ +L
Sbjct: 29 ALGMACPPKCRCEKLLFYCDSQGFRSVPNTTDKGSLGLSLRHNHITELERDQFASFSQLT 88
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICD 211
+ L NQIS V DAFQGL L L L++N + YLP+ F +L L+ L +S N
Sbjct: 89 WLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDVSFN----- 143
Query: 212 CHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
LS LH P L + H++ ++ IP F
Sbjct: 144 -QLSSLH------PELFYGLRKLQTLHLRSNSLRTIPVRLF 177
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 106/258 (41%), Gaps = 24/258 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N + YLP+ F +L L+ L +S N LS LH P L + H
Sbjct: 116 LSSNKIFYLPNTTFTQLINLQNLDVSFN------QLSSLH------PELFYGLRKLQTLH 163
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL--------N 116
++ ++ IP F +E S G++ RE L N
Sbjct: 164 LRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLAR--NGFAGLIKLRELHLEHNQLTKIN 221
Query: 117 KVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
L + L L+ N I+ L + L ++DL+ N+I + + F+ + +L
Sbjct: 222 FAHFLRLSSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKI 281
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFA 235
L ++NN L L + L L T+ +S N + C + L WL + R C +
Sbjct: 282 LLMDNNKLNSLDSKILNSLRSLTTVGLSGNLWECSARICALASWLGSFQGRWEHSILCHS 341
Query: 236 PSHIKGQNILDIPEHEFK 253
P H +G++ILD H F+
Sbjct: 342 PDHTQGEDILD-AVHGFQ 358
>gi|426343951|ref|XP_004038542.1| PREDICTED: probable G-protein coupled receptor 125-like, partial
[Gorilla gorilla gorilla]
Length = 926
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 64/126 (50%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N I+ + P AF L+R+DL+ N+I + D F+GL +L L L+ N + L
Sbjct: 110 LDLRNNLISSIDPGAFWGLSSLKRLDLTNNRIGCLNADVFRGLTNLVRLNLSGNLFSSLS 169
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
G F L LR+L +CDC++ W+HRW+K T+C P ++ Q + +
Sbjct: 170 QGTFDYLASLRSLEFQTEYLLCDCNILWMHRWVKEKNITVRDTRCVYPKSLQAQPVTGVK 229
Query: 249 EHEFKC 254
+ C
Sbjct: 230 QELLTC 235
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N + L G F L LR+L +CDC++ W+HRW+K T+C P
Sbjct: 160 LSGNLFSSLSQGTFDYLASLRSLEFQTEYLLCDCNILWMHRWVKEKNITVRDTRCVYPKS 219
Query: 65 IKGQNILDIPEHEFKCSGPVEKPT 88
++ Q + + + C P+E P+
Sbjct: 220 LQAQPVTGVKQELLTCDPPLELPS 243
>gi|284010946|dbj|BAI66948.1| variable lymphocyte receptor B [Eptatretus burgeri]
Length = 225
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 61/113 (53%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC KGL VP +P +TT+L L N + +P F +L ++L
Sbjct: 23 ACPSRCSCSGTSVDCDSKGLTSVPSGIPSSTTKLYLGGNKLQSIPSGVFDKLSKLTHLEL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
NQ+ + F L LT+L L+ N + +LP G+F +L +L L++S N
Sbjct: 83 QGNQLQSIPSGVFDQLTQLTNLELDRNQIKFLPMGIFDKLTKLTELQLSTNQL 135
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ VDC KGL VP +P +TT+L + L S S F + +
Sbjct: 23 ACPSRCSCSGTSVDCDSKGLTSVPSGIPSSTTKL-------YLGGNKLQSIPSGVFDKLS 75
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L+ N + +P F +L + L++N I LP F +L +
Sbjct: 76 KLTHLELQGNQLQSIPSGVFDQLTQLTNLELDRNQIKFLPMGIFDKLTKLTEL 128
>gi|284010922|dbj|BAI66936.1| variable lymphocyte receptor B [Eptatretus burgeri]
Length = 215
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 86/195 (44%), Gaps = 33/195 (16%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ + C KGL VP +P +TT L L QN + LP F +L+ + L
Sbjct: 23 ACPSRCSCSGTELRCYGKGLTSVPTGIPASTTWLSLSQNQLQSLPNGVFDELTQLKELYL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENS-------- 207
S+NQ+ + F L SLT L L++N L LP+GVF +L +L L + N
Sbjct: 83 SQNQLQSLPSGVFDKLTSLTKLWLSSNKLQSLPNGVFDKLTKLTVLGLGTNQLKSVPDGV 142
Query: 208 ----------------FICDC-HLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEH 250
+ C C + +L W+K+ + + S + IP+
Sbjct: 143 FDRLTSLQYIYLYSNPWDCTCPGIRYLSEWIKKNSGIVYHYSSSTGSRV-------IPDS 195
Query: 251 EFKCSGSSMETRSKI 265
KCSGS RS I
Sbjct: 196 A-KCSGSGKPVRSII 209
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 8/110 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ + C KGL VP +P +TT L+ + + L S + F T
Sbjct: 23 ACPSRCSCSGTELRCYGKGLTSVPTGIPASTTWLS-------LSQNQLQSLPNGVFDELT 75
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
+ L QN + LP F L ++ L N + LP F +L
Sbjct: 76 QLKELYLSQNQLQSLPSGVFDKLTSLTKLWLSSNKLQSLPNGVFDKLTKL 125
>gi|441639836|ref|XP_004090230.1| PREDICTED: leucine-rich repeat-containing protein 17 isoform 2
[Nomascus leucogenys]
Length = 313
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 118/291 (40%), Gaps = 45/291 (15%)
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
+DC+E+ L V P+ + L +N I L F+ +K+L+ +DL +N+ISK+ +A
Sbjct: 65 LDCQERKLVYVLPSWPQDLLHMLLARNKIRILKNNMFSKFKKLKSLDLQQNEISKIESEA 124
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYP 225
F GL LT+L L +N + L + VF L LR+ +N + C C + L L+ R
Sbjct: 125 FFGLNKLTTLLLQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCEIETLISMLQIPRNR 184
Query: 226 RLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKP 285
LG Y KC +P K + + I + C+ EE P P
Sbjct: 185 NLGNYAKCESPQEQKNKKLRQIKSEQL-CN------------EEEKEQLDPKPQVSGRPP 231
Query: 286 TGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYI 345
+ + + H +DC+ K L KVP +P +L
Sbjct: 232 VIKPEVDSTFCHNYVFPIQTLDCKRKELKKVPNNIPPDIVKLD----------------- 274
Query: 346 SNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L N I +L PK F + L+++ L N I + P +
Sbjct: 275 -------------LSYNKINQLRPKEFEDVHELKKLNLSSNGIEFIDPGSL 312
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 75/169 (44%), Gaps = 13/169 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +N + L + VF L LR+ +N + C C + L L+ R LG Y KC +P
Sbjct: 136 LQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCEIETLISMLQIPRNRNLGNYAKCESP 195
Query: 63 SHIKGQNILDIPEHEFKCSGPVEK--PTGECAAEPSCPHP----CRCADGI-----VDCR 111
K + + I + E+ P + + P P C + + +DC+
Sbjct: 196 QEQKNKKLRQIKSEQLCNEEEKEQLDPKPQVSGRPPVIKPEVDSTFCHNYVFPIQTLDCK 255
Query: 112 EKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQI 160
K L KVP +P +L L N I +L PK F + L++++LS N I
Sbjct: 256 RKELKKVPNNIPPDIVKLDLSYNKINQLRPKEFEDVHELKKLNLSSNGI 304
>gi|76161871|gb|ABA40029.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 192
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 82/183 (44%), Gaps = 18/183 (9%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C K L VP +P T L + N IT+L P F +L R+DL
Sbjct: 1 ACPSQCSCSGTHVNCERKRLTSVPAGIPTTTQTLWGDSNQITKLEPGVFDRLTQLTRLDL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF------I 209
NQ++ + F L LT L L N LT LP GVF L L+ L ++ N +
Sbjct: 61 DNNQLTVLPAGVFDSLTQLTYLNLGGNQLTALPPGVFDRLVNLQRLWLNNNQLTSLPAGV 120
Query: 210 CDCHLSWLHRWLKRYP-----RLGLYTKCFAPSHIKGQNILDIPEH----EFKCSGSSME 260
D S H WL P LY K + H +I++ H KCSG++
Sbjct: 121 FDNLKSLTHIWLLNNPWDCECSDILYLKNWIVQH---ASIVNPSGHGGVDNVKCSGTNTP 177
Query: 261 TRS 263
R+
Sbjct: 178 VRA 180
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 51/131 (38%), Gaps = 20/131 (15%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTEL------------------TYMVSIDR 335
+CP C C+ V+C K L VP +P T L T + +D
Sbjct: 1 ACPSQCSCSGTHVNCERKRLTSVPAGIPTTTQTLWGDSNQITKLEPGVFDRLTQLTRLD- 59
Query: 336 VDKVLLYSYISNNFKRWTNRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPK 394
+D L + F T + L N +T LPP F L+R+ L N +T LP
Sbjct: 60 LDNNQLTVLPAGVFDSLTQLTYLNLGGNQLTALPPGVFDRLVNLQRLWLNNNQLTSLPAG 119
Query: 395 AFANYKRLRRM 405
F N K L +
Sbjct: 120 VFDNLKSLTHI 130
>gi|357613547|gb|EHJ68577.1| putative toll [Danaus plexippus]
Length = 1187
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 104/231 (45%), Gaps = 27/231 (11%)
Query: 5 LNNNNLTYLPDGVFAELF-----RLRTLRISENSFICDCHLSWLHRW-----LKRYPR-L 53
L +N + L G FA F L ISEN F CDC + WL R L++ PR +
Sbjct: 510 LYSNKIKTLDVGAFAISFVPEDRDLPEFYISENPFECDCTMEWLQRINQLSELRQRPRVM 569
Query: 54 GLYTKCFAPSHIKGQN---ILDIPEHEFKCSGPVEKPT-------GECAAEPSCPHPCRC 103
L + +H + + +L++ EF C T C + +CP C C
Sbjct: 570 DLENVRCSLTHSRSSSDVLLLEVKSFEFLCEYESHCFTLCHCCDFDACDCKMTCPDKCSC 629
Query: 104 ------ADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSK 157
+ +VDC G + VP +P TE+ L+ ND+ EL F KRL+ + L+
Sbjct: 630 YHDLTWSSNVVDCSSGGYDHVPDQIPMDATEIYLDGNDLKELGNHVFIGKKRLQVLYLNN 689
Query: 158 NQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ I+ + F G++SL L L NN L L + F +L L L + +N+
Sbjct: 690 SNINLIQNKTFNGIESLRVLHLENNKLEVLRNTQFTKLQNLNELYLQDNNI 740
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 155/418 (37%), Gaps = 95/418 (22%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTK-----C 59
L +NN+ + DG FA +LR + + N + + K P + L
Sbjct: 370 LASNNIDQIDDGAFASNLQLRAIVLDGNKLV-----DLKGIFTKTQPLVWLNVSNNELLW 424
Query: 60 FAPSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVP 119
F SHI N+ + HE K +EK + +C ++D + +
Sbjct: 425 FDYSHIP-TNLEWLDMHENK----IEKLEDTYGVKETCNVK------MLDVSNNKIRNID 473
Query: 120 -ILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLT 178
P + + L N+I ++ P F L ++ L N+I + V AF
Sbjct: 474 EFSFPSSIETVVLNNNNIEKINPGTFLQKYNLNKVMLYSNKIKTLDVGAFA--------- 524
Query: 179 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW-----LKRYPR-LGLYTK 232
++++P E L ISEN F CDC + WL R L++ PR + L
Sbjct: 525 -----ISFVP-----EDRDLPEFYISENPFECDCTMEWLQRINQLSELRQRPRVMDLENV 574
Query: 233 CFAPSHIKGQN---ILDIPEHEFKCSGSSMETRSKIYREECSTDFH--PYNSCPVEKPTG 287
+ +H + + +L++ EF C Y C T H +++C +
Sbjct: 575 RCSLTHSRSSSDVLLLEVKSFEFLCE----------YESHCFTLCHCCDFDACDCKMT-- 622
Query: 288 ECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISN 347
C + SC H + +VDC G + VP +P TE+
Sbjct: 623 -CPDKCSCYHDLTWSSNVVDCSSGGYDHVPDQIPMDATEI-------------------- 661
Query: 348 NFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L+ ND+ EL F KRL+ + L ++I + K F + LR +
Sbjct: 662 ----------YLDGNDLKELGNHVFIGKKRLQVLYLNNSNINLIQNKTFNGIESLRVL 709
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 122 LPEATTELR------LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLT 175
+PEA LR L N IT++ F L + L N+I K++ D F L SL
Sbjct: 307 VPEAIKTLRFLTALDLGMNRITKVTTNLFEGLDDLFGLRLVGNKIEKISKDTFAALPSLQ 366
Query: 176 SLTLNNNNLTYLPDGVFAELFRLRTLRISENSFI 209
L L +NN+ + DG FA +LR + + N +
Sbjct: 367 ILNLASNNIDQIDDGAFASNLQLRAIVLDGNKLV 400
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 94/207 (45%), Gaps = 15/207 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHR----WLKRYPRLGL-YTKC 59
LNNN+L+ L G+ L +L+ L +S N + W++R L R L L + +
Sbjct: 153 LNNNSLSVLAPGLLEGLDQLQILDLSYNELTSE----WVNRDTFSGLVRLIVLNLSHNRI 208
Query: 60 FAPSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVP 119
+ Q++ ++ + + G + + + IV+ + +
Sbjct: 209 TKIDALLFQDLNNLQFLSLEYNNVARIADGAFSYLKNLHSLSLAHNNIVEVDSNHFSNLY 268
Query: 120 ILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTL 179
+L +L L+ N IT++ ++F N +L + LS NQ+S+V +A + L+ LT+L L
Sbjct: 269 VL-----NQLFLDGNRITKVDLRSFENITKLHDLGLSGNQLSEVP-EAIKTLRFLTALDL 322
Query: 180 NNNNLTYLPDGVFAELFRLRTLRISEN 206
N +T + +F L L LR+ N
Sbjct: 323 GMNRITKVTTNLFEGLDDLFGLRLVGN 349
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 123/297 (41%), Gaps = 37/297 (12%)
Query: 134 NDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFA 193
N I+ + +AF L+ ++LS N ++ + + FQ + + + LNNN+L+ L G+
Sbjct: 108 NRISTVADRAFVGLSDLQMLNLSTNALTALPPEMFQSSRDIKQIYLNNNSLSVLAPGLLE 167
Query: 194 ELFRLRTLRISENSFICDCHLSWLHR----WLKRYPRLGL----YTKCFAP--------- 236
L +L+ L +S N + W++R L R L L TK A
Sbjct: 168 GLDQLQILDLSYNELTSE----WVNRDTFSGLVRLIVLNLSHNRITKIDALLFQDLNNLQ 223
Query: 237 -SHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSC 295
++ N+ I + F ++ + S + D + +++ V
Sbjct: 224 FLSLEYNNVARIADGAFSYL-KNLHSLSLAHNNIVEVDSNHFSNLYVLNQLF-LDGNRIT 281
Query: 296 PHPCRCADGIVDCREKGLNKVPIL-LPEATTELTYMVSID----RVDKVL--LYSYISNN 348
R + I + GL+ + +PEA L ++ ++D R+ KV L+ + +
Sbjct: 282 KVDLRSFENITKLHDLGLSGNQLSEVPEAIKTLRFLTALDLGMNRITKVTTNLFEGLDDL 341
Query: 349 FKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F RL N I ++ FA L+ + L N+I ++ AFA+ +LR +
Sbjct: 342 F------GLRLVGNKIEKISKDTFAALPSLQILNLASNNIDQIDDGAFASNLQLRAI 392
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 10/99 (10%)
Query: 113 KGLNKVPILLPEATTELRLEQNDITE--LPPKAFANYKRLRRIDLSKNQISKVAVDAFQG 170
+GL+++ IL L N++T + F+ RL ++LS N+I+K+ FQ
Sbjct: 167 EGLDQLQIL--------DLSYNELTSEWVNRDTFSGLVRLIVLNLSHNRITKIDALLFQD 218
Query: 171 LKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFI 209
L +L L+L NN+ + DG F+ L L +L ++ N+ +
Sbjct: 219 LNNLQFLSLEYNNVARIADGAFSYLKNLHSLSLAHNNIV 257
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 111/283 (39%), Gaps = 70/283 (24%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L + N+I+ LP ++ + L+R+ L N+IS VA AF GL L L L+ N LT LP
Sbjct: 79 LDMSFNEISALPDNGLSSLRALQRLLLQNNRISTVADRAFVGLSDLQMLNLSTNALTALP 138
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN---IL 245
+F ++ + ++ NS AP ++G + IL
Sbjct: 139 PEMFQSSRDIKQIYLNNNSL-----------------------SVLAPGLLEGLDQLQIL 175
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
D+ +E + +T S + R +
Sbjct: 176 DLSYNELTSEWVNRDTFSGLVRL-----------------------------------IV 200
Query: 306 VDCREKGLNKVPILLPEATTELTYM-VSIDRVDKVL--LYSYISNNFKRWTNRSRRLEQN 362
++ + K+ LL + L ++ + + V ++ +SY+ N S L N
Sbjct: 201 LNLSHNRITKIDALLFQDLNNLQFLSLEYNNVARIADGAFSYLKN------LHSLSLAHN 254
Query: 363 DITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+I E+ F+N L ++ L+ N IT++ ++F N +L +
Sbjct: 255 NIVEVDSNHFSNLYVLNQLFLDGNRITKVDLRSFENITKLHDL 297
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L L N ++E+P +A + L +DL N+I+KV + F+GL L L L N + +
Sbjct: 296 DLGLSGNQLSEVP-EAIKTLRFLTALDLGMNRITKVTTNLFEGLDDLFGLRLVGNKIEKI 354
Query: 188 PDGVFAELFRLRTLRISENSF 208
FA L L+ L ++ N+
Sbjct: 355 SKDTFAALPSLQILNLASNNI 375
>gi|70955616|gb|AAZ16369.1| variable lymphocyte receptor B [Eptatretus stoutii]
Length = 248
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 65/129 (50%), Gaps = 1/129 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C+ K L VP +P +TT L L N + LP F +L + L
Sbjct: 23 ACPSRCSCSGTTVNCQSKSLTSVPSGIPSSTTILYLHVNQLQSLPNGVFGKLTQLTILYL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
+NQ+ + F L L L L N L +PDG+F L L+T +S N + C C +
Sbjct: 83 YQNQLQSLPNGVFDKLTQLKDLALYTNQLKSVPDGIFDRLTSLQTFGLSSNPWDCTCPGI 142
Query: 215 SWLHRWLKR 223
+L RW ++
Sbjct: 143 DYLSRWSQK 151
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 8/111 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C+ K L VP +P +TT L V+ L S + F + T
Sbjct: 23 ACPSRCSCSGTTVNCQSKSLTSVPSGIPSSTTILYLHVN-------QLQSLPNGVFGKLT 75
Query: 354 NRS-RRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLR 403
+ L QN + LP F +L+ + L N + +P F L+
Sbjct: 76 QLTILYLYQNQLQSLPNGVFDKLTQLKDLALYTNQLKSVPDGIFDRLTSLQ 126
>gi|12836704|dbj|BAB23775.1| unnamed protein product [Mus musculus]
Length = 570
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 109/258 (42%), Gaps = 20/258 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFI-CDCHL-----SWLHRWLKRYPRLGLYTK 58
L+NN L LP+G L L+ L + N+ HL S WL+ L
Sbjct: 223 LSNNMLARLPEGALGSLSSLQELFLDGNAITELSPHLFSQLFSLEMLWLQHNAICHLPVS 282
Query: 59 CFAPSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKV 118
F+ H L + ++ + P G A H + + E +
Sbjct: 283 LFSSLH--NLTFLSLKDNALRT-----LPEGLFAHNQGLLHLSLSYNQLETIPEGAFTNL 335
Query: 119 PILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLT 178
L+ L L N IT+LP F N ++L ++ L N ++ + F L L L
Sbjct: 336 SRLV-----SLTLSHNAITDLPEHVFRNLEQLVKLSLDSNNLTALHPALFHNLSRLQLLN 390
Query: 179 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL--GLYTKCFAP 236
L+ N LT LP G+F + L L + N + CDCHLS+L WL+ Y +T C P
Sbjct: 391 LSRNQLTTLPGGIFDTNYDLFNLALLGNPWQCDCHLSYLTSWLRLYNNQISNTHTFCAGP 450
Query: 237 SHIKGQNILDIPEHEFKC 254
+++KGQ + ++ + + C
Sbjct: 451 AYLKGQLVPNLKQEQLIC 468
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 111/280 (39%), Gaps = 40/280 (14%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L L+ + + LP F + L + L NQ+ + FQ L+ L +L L N LT L
Sbjct: 148 KLTLDFDRLAGLPEDLFCHMDILESLQLQGNQLRTLPGRLFQSLRDLRTLNLAQNLLTQL 207
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT-KCFAPSHIKGQNILD 246
P G F L L+ L++S N L R P L + + G I +
Sbjct: 208 PKGAFQSLTGLQMLKLSNN-------------MLARLPEGALGSLSSLQELFLDGNAITE 254
Query: 247 IPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIV 306
+ H F S+E + C ++S H +
Sbjct: 255 LSPHLFS-QLFSLEMLWLQHNAICHLPVSLFSSL----------------HNLT----FL 293
Query: 307 DCREKGLNKVPILLPEATTELTYM-VSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
++ L +P L L ++ +S ++++ + ++ N R S L N IT
Sbjct: 294 SLKDNALRTLPEGLFAHNQGLLHLSLSYNQLETIPEGAF--TNLSRLV--SLTLSHNAIT 349
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+LP F N ++L ++ L+ N++T L P F N RL+ +
Sbjct: 350 DLPEHVFRNLEQLVKLSLDSNNLTALHPALFHNLSRLQLL 389
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/351 (19%), Positives = 125/351 (35%), Gaps = 72/351 (20%)
Query: 97 CPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDIT------------------- 137
CP C C V C ++ L +P +P T++ + T
Sbjct: 45 CPVGCDCFGREVFCSDEQLADIPPDIPPHITDIVFVETAFTTVRTRAFSGSPNLTKVVFL 104
Query: 138 -----ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
L P AF RL+ ++++ + +S ++ F L SL LTL+ + L LP+ +F
Sbjct: 105 NTQVRHLEPDAFGGLPRLQDLEITGSPVSNLSAHIFSNLSSLEKLTLDFDRLAGLPEDLF 164
Query: 193 AELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFAPSHIKGQNILDIPEHE 251
+ L +L++ N L+ P RL + ++ + +P+
Sbjct: 165 CHMDILESLQLQGNQ-------------LRTLPGRLFQSLRDLRTLNLAQNLLTQLPKGA 211
Query: 252 FKC-SGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVD--- 307
F+ +G M S N+ P G + S + I +
Sbjct: 212 FQSLTGLQMLKLS--------------NNMLARLPEGALGSLSSLQELFLDGNAITELSP 257
Query: 308 -------------CREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN 354
+ + +P+ L + LT++ D + L ++N
Sbjct: 258 HLFSQLFSLEMLWLQHNAICHLPVSLFSSLHNLTFLSLKDNALRTLPEGLFAHNQGL--- 314
Query: 355 RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P AF N RL + L N IT+LP F N ++L ++
Sbjct: 315 LHLSLSYNQLETIPEGAFTNLSRLVSLTLSHNAITDLPEHVFRNLEQLVKL 365
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 18/144 (12%)
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
I G + ++ H F +EK T + P C I++
Sbjct: 127 ITGSPVSNLSAHIFSNLSSLEKLTLDFDRLAGLPEDLFCHMDILE--------------- 171
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL 184
L+L+ N + LP + F + + LR ++L++N ++++ AFQ L L L L+NN L
Sbjct: 172 ---SLQLQGNQLRTLPGRLFQSLRDLRTLNLAQNLLTQLPKGAFQSLTGLQMLKLSNNML 228
Query: 185 TYLPDGVFAELFRLRTLRISENSF 208
LP+G L L+ L + N+
Sbjct: 229 ARLPEGALGSLSSLQELFLDGNAI 252
>gi|124339785|ref|NP_619623.2| leucine-rich repeat-containing protein 4 precursor [Mus musculus]
gi|51701689|sp|Q99PH1.2|LRRC4_MOUSE RecName: Full=Leucine-rich repeat-containing protein 4; AltName:
Full=Brain tumor-associated protein MBAG1; AltName:
Full=Netrin-G2 ligand; Short=NGL-2; Flags: Precursor
gi|21703692|gb|AAG60620.2| leucine rich repeat-containing 4 protein [Mus musculus]
gi|109734691|gb|AAI17835.1| Leucine rich repeat containing 4 [Mus musculus]
gi|148681851|gb|EDL13798.1| mCG53001 [Mus musculus]
Length = 652
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 2/131 (1%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL + N E+ P +F L+++ + +Q+S + +AF GL SL L L +NNL+ L
Sbjct: 221 ELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSL 280
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAPSHIKGQNIL 245
P +F L L L + N + CDC + WL WL+ Y +C AP H++G+ ++
Sbjct: 281 PHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAPMHMRGRYLV 340
Query: 246 DIPEHEFKCSG 256
++ + F+CS
Sbjct: 341 EVDQAAFQCSA 351
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 96 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRI 153
+CP C C++ V C +GL++VP +P T L L +N+I + F + L +
Sbjct: 44 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVL 103
Query: 154 DLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
L +N I ++ V AF GL SL +L L +N LT +P G F L +LR L + N
Sbjct: 104 QLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNN 156
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAP 62
L +NNL+ LP +F L L L + N + CDC + WL WL+ Y +C AP
Sbjct: 272 LAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAP 331
Query: 63 SHIKGQNILDIPEHEFKCSGP--VEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
H++G+ ++++ + F+CS P ++ P +E R A+ + CR ++ V
Sbjct: 332 MHMRGRYLVEVDQAAFQCSAPFIMDAPRDLNISED------RMAE--LKCRTPPMSSVKW 383
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRID 154
LLP T ++ + N+ R+ ID
Sbjct: 384 LLPNGTVLSHASRHPRISVLNDGTLNFSRVLLID 417
Score = 38.1 bits (87), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 294 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
+CP C C++ V C +GL++VP +P T L M + ++ + + ++ +
Sbjct: 44 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHH---- 99
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+L +N I ++ AF L + L N +T +P AF +LR +
Sbjct: 100 --LEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLREL 151
>gi|363743128|ref|XP_003642780.1| PREDICTED: leucine-rich repeat-containing G-protein coupled
receptor 6-like [Gallus gallus]
Length = 951
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 66/123 (53%), Gaps = 4/123 (3%)
Query: 88 TGECAAEPSCPHPCRC-ADGI---VDCREKGLNKVPILLPEATTELRLEQNDITELPPKA 143
E A P CP C C DG+ VDC E GL +VP L T L L N+I++L P A
Sbjct: 19 AAEPGAVPPCPSQCHCEQDGVALSVDCSELGLPEVPSALSPLTAYLDLSMNNISQLQPNA 78
Query: 144 FANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRI 203
F + L + LS NQIS + +AF GL SL L L NN L+ +P +L L++LR+
Sbjct: 79 FRRLRFLEELRLSGNQISSIPGEAFSGLYSLKILMLQNNQLSRIPAEALRDLPNLQSLRL 138
Query: 204 SEN 206
N
Sbjct: 139 DAN 141
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 118/294 (40%), Gaps = 40/294 (13%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
++ L L+ N +TE+P +A L+ + L+ NQI ++ AFQ L SL L L+NN
Sbjct: 155 QSLRHLWLDDNALTEIPVRALNRLPALQAMTLALNQIWRIPDYAFQNLSSLVVLHLHNNR 214
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
+ L F L L TL ++ N + R L R LG + N
Sbjct: 215 IQRLGANGFDGLHNLETLDLNYNELL---EFPGAIRTLGRLQELGFHNN----------N 261
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
I IPE+ F ++T H Y++ P++ G+ A + +
Sbjct: 262 IKAIPENAF-VGNPLLQT------------IHFYDN-PIQF-VGQSAFQYLPKLHTLSLN 306
Query: 304 GIVDCRE----KGLNKVPIL-LPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN--RS 356
G D RE KG + +L L A L ++ + + N + + R
Sbjct: 307 GATDIREFPDLKGTTSLEVLTLTRAGIRLLPRAVCQQLPNLRVLELSHNKIEDLPSFHRC 366
Query: 357 RRLEQ-----NDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+RLE+ N I E+ F LR I L NDI + P AF + L ++
Sbjct: 367 QRLEELGLQHNRIHEIRADTFVQLTALRSIDLSWNDIHFIHPDAFVTLRSLTKL 420
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 38/72 (52%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL L+ N I E+ F LR IDLS N I + DAF L+SLT L L++N L L
Sbjct: 371 ELGLQHNRIHEIRADTFVQLTALRSIDLSWNDIHFIHPDAFVTLRSLTKLDLSDNRLAAL 430
Query: 188 PDGVFAELFRLR 199
P G L L+
Sbjct: 431 PLGGLGSLTHLK 442
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 49/124 (39%), Gaps = 34/124 (27%)
Query: 286 TGECAAEPSCPHPCRC-ADGI---VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLL 341
E A P CP C C DG+ VDC E GL +VP L T L
Sbjct: 19 AAEPGAVPPCPSQCHCEQDGVALSVDCSELGLPEVPSALSPLTAYLD------------- 65
Query: 342 YSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKR 401
L N+I++L P AF + L +RL N I+ +P +AF+
Sbjct: 66 -----------------LSMNNISQLQPNAFRRLRFLEELRLSGNQISSIPGEAFSGLYS 108
Query: 402 LRRM 405
L+ +
Sbjct: 109 LKIL 112
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 91/232 (39%), Gaps = 46/232 (19%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+NN + L F L L TL ++ N + R L R LG +
Sbjct: 210 LHNNRIQRLGANGFDGLHNLETLDLNYNELL---EFPGAIRTLGRLQELGFHNN------ 260
Query: 65 IKGQNILDIPEHEFKCS----------GPVEKPTGECAAEPSCPHPCRCADGIVDCRE-- 112
NI IPE+ F + P++ G+ A + +G D RE
Sbjct: 261 ----NIKAIPENAFVGNPLLQTIHFYDNPIQF-VGQSAFQYLPKLHTLSLNGATDIREFP 315
Query: 113 --KGLNKVPIL---------LPEATTE-------LRLEQNDITELPPKAFANYKRLRRID 154
KG + +L LP A + L L N I +LP +F +RL +
Sbjct: 316 DLKGTTSLEVLTLTRAGIRLLPRAVCQQLPNLRVLELSHNKIEDLP--SFHRCQRLEELG 373
Query: 155 LSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
L N+I ++ D F L +L S+ L+ N++ ++ F L L L +S+N
Sbjct: 374 LQHNRIHEIRADTFVQLTALRSIDLSWNDIHFIHPDAFVTLRSLTKLDLSDN 425
>gi|327273263|ref|XP_003221400.1| PREDICTED: probable G-protein coupled receptor 125-like [Anolis
carolinensis]
Length = 1310
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L+ N I+ + P AF L+R+DL+ NQI + VD F+GL +L L L+ N + L
Sbjct: 103 LDLKNNLISVIDPGAFMGLTSLKRLDLANNQIGCLNVDMFKGLANLVRLNLSGNLFSSLA 162
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
G F L L++L + +CDC++ W+ +W++ T+C P ++ Q +L +
Sbjct: 163 QGTFDHLTSLKSLEFQTDYLLCDCNMLWMQQWVQERNITVRDTRCAYPKSLQAQPVLGVK 222
Query: 249 EHEFKCS 255
+ C
Sbjct: 223 QGLLTCG 229
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 42/84 (50%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N + L G F L L++L + +CDC++ W+ +W++ T+C P
Sbjct: 153 LSGNLFSSLAQGTFDHLTSLKSLEFQTDYLLCDCNMLWMQQWVQERNITVRDTRCAYPKS 212
Query: 65 IKGQNILDIPEHEFKCSGPVEKPT 88
++ Q +L + + C P+E P+
Sbjct: 213 LQAQPVLGVKQGLLTCGPPLELPS 236
>gi|348506080|ref|XP_003440588.1| PREDICTED: leucine-rich repeat-containing protein 17-like
[Oreochromis niloticus]
Length = 447
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 121/289 (41%), Gaps = 40/289 (13%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAPSH 64
+N L L + + L LR+ +N + C C + L R L+ LG + +C P
Sbjct: 129 HNRLQTLSEEALIPMPNLGYLRLYDNPWNCLCPMDSLVRTLQVPSNRNLGNHARCAEPIW 188
Query: 65 IKGQNILDIPEHEFKCSGP------VEKPTGECAA-EPSCPHPCRCADGI---------- 107
+K + + + E C P TG EPS A +
Sbjct: 189 LKNMKLKHV-DPELLCKEPDPANNQQNDETGYTGVLEPSSIRSKPDATTVCYTYHYPQIR 247
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
+DC +GL +VP +P+ + L N I+ L + F K LR ++LS N + + +
Sbjct: 248 MDCSNRGLTEVPSGIPDNVVHINLSHNSISHLKARDFHAAKSLRTLNLSNNNMEHLDKGS 307
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL 227
GL L L L+NN L ++ GV +L+ L L++ N ++CD + ++ WL +P +
Sbjct: 308 LTGLLHLQELDLSNNQLKFVQYGVLEDLYFLLHLKLEGNLWVCDYSIQYMVYWLSLHPGV 367
Query: 228 ---GLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTD 273
GL C +P + +G S+E K Y EC D
Sbjct: 368 SPSGLV--CHSP---------------LEYAGESVEEYVKAYNRECPKD 399
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 119/323 (36%), Gaps = 44/323 (13%)
Query: 87 PTGECAAEPSCPHPCRCADGIVDCREKGLNKVPIL--LPEATTELRLEQNDITELPPKAF 144
P+G P+C VDC+++ L+ +P L L +N I L AF
Sbjct: 35 PSG--LVSPNCLESTESGQVFVDCQDRRLSSIPTANTWSNKPKHLLLARNRIKVLHDGAF 92
Query: 145 ANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRIS 204
Y+ L +DL +NQIS V AFQGL LT+L L +N L L + + L LR+
Sbjct: 93 LGYENLDSLDLQQNQISLVEDGAFQGLTKLTTLLLQHNRLQTLSEEALIPMPNLGYLRLY 152
Query: 205 ENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETR 262
+N + C C + L R L+ LG + +C P +K + + + E C
Sbjct: 153 DNPWNCLCPMDSLVRTLQVPSNRNLGNHARCAEPIWLKNMKLKHV-DPELLCKEPDPANN 211
Query: 263 SKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 322
+ + P S KP R +DC +GL +VP +P+
Sbjct: 212 QQNDETGYTGVLEP--SSIRSKPDATTVCYTYHYPQIR-----MDCSNRGLTEVPSGIPD 264
Query: 323 ATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIR 382
+ L N I+ L + F K LR +
Sbjct: 265 NVVHIN------------------------------LSHNSISHLKARDFHAAKSLRTLN 294
Query: 383 LEQNDITELPPKAFANYKRLRRM 405
L N++ L + L+ +
Sbjct: 295 LSNNNMEHLDKGSLTGLLHLQEL 317
>gi|114326297|ref|NP_001040056.2| leucine-rich glioma-inactivated protein 1 precursor [Bos taurus]
gi|426252805|ref|XP_004020093.1| PREDICTED: leucine-rich glioma-inactivated protein 1 isoform 2
[Ovis aries]
gi|75070056|sp|Q5E9T6.1|LGI1_BOVIN RecName: Full=Leucine-rich glioma-inactivated protein 1; Flags:
Precursor
gi|59858033|gb|AAX08851.1| leucine-rich, glioma inactivated 1 precursor [Bos taurus]
Length = 533
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 83/205 (40%), Gaps = 6/205 (2%)
Query: 89 GECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYK 148
G+ A+P CP C C C + +P +P L N + AF
Sbjct: 34 GKKPAKPKCPAVCTCTKDNALC--ENARSIPRTVPPDVISLLFTSNSFDVISDDAFIGLP 91
Query: 149 RLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
L + + N I ++ F+GLKSL L+L NNNL LP +F L L + + NSF
Sbjct: 92 HLEYLFIENNNIKSISRHTFRGLKSLIHLSLANNNLQTLPKDIFKGLDSLTNVDLRGNSF 151
Query: 209 ICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYRE 268
CDC L WL WL C P K + I + +F C + + +
Sbjct: 152 NCDCKLKWLVEWLSHTNATVEDIYCEGPPEYKKRKINSLSSKDFDCIITEFAKSQDLPYQ 211
Query: 269 ECSTDFHPYNS---CPVEKP-TGEC 289
S D Y + + +P TG+C
Sbjct: 212 SLSIDTFSYMNDEYVVIAQPFTGKC 236
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 34/77 (44%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L NNNL LP +F L L + + NSF CDC L WL WL C P
Sbjct: 121 SLANNNLQTLPKDIFKGLDSLTNVDLRGNSFNCDCKLKWLVEWLSHTNATVEDIYCEGPP 180
Query: 64 HIKGQNILDIPEHEFKC 80
K + I + +F C
Sbjct: 181 EYKKRKINSLSSKDFDC 197
>gi|109730745|gb|AAI17834.1| Leucine rich repeat containing 4 [Mus musculus]
Length = 652
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 2/131 (1%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL + N E+ P +F L+++ + +Q+S + +AF GL SL L L +NNL+ L
Sbjct: 221 ELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSL 280
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAPSHIKGQNIL 245
P +F L L L + N + CDC + WL WL+ Y +C AP H++G+ ++
Sbjct: 281 PHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAPMHMRGRYLV 340
Query: 246 DIPEHEFKCSG 256
++ + F+CS
Sbjct: 341 EVDQAAFQCSA 351
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 96 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRI 153
+CP C C++ V C +GL++VP +P T L L +N+I + F + L +
Sbjct: 44 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVL 103
Query: 154 DLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
L +N I ++ V AF GL SL +L L +N LT +P G F L +LR L + N
Sbjct: 104 QLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNN 156
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAP 62
L +NNL+ LP +F L L L + N + CDC + WL WL+ Y +C AP
Sbjct: 272 LAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAP 331
Query: 63 SHIKGQNILDIPEHEFKCSGP--VEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
H++G+ ++++ + F+CS P ++ P +E R A+ + CR ++ V
Sbjct: 332 MHMRGRYLVEVDQAAFQCSAPFIMDAPRDLNISED------RMAE--LKCRTPPMSSVKW 383
Query: 121 LLPEATTELRLEQNDITELPPKAFANYKRLRRID 154
LLP T ++ + N+ R+ ID
Sbjct: 384 LLPNGTVLSHASRHPRISVLNDGTLNFSRVLLID 417
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 294 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
+CP C C++ V C +GL++VP +P T L M + ++ + + ++ +
Sbjct: 44 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHH---- 99
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+L +N I ++ AF L + L N +T +P AF +LR +
Sbjct: 100 --LEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLREL 151
>gi|349587942|pdb|3ZYI|A Chain A, Netring2 In Complex With Ngl2
Length = 452
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 2/131 (1%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL + N E+ P +F L+++ + +Q+S + +AF GL SL L L +NNL+ L
Sbjct: 222 ELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSL 281
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRY--PRLGLYTKCFAPSHIKGQNIL 245
P +F L L L + N + CDC + WL WL+ Y +C AP H++G+ ++
Sbjct: 282 PHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAPMHMRGRYLV 341
Query: 246 DIPEHEFKCSG 256
++ + F+CS
Sbjct: 342 EVDQASFQCSA 352
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 96 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRI 153
+CP C C++ V C +GL++VP +P T L L +N+I + F + L +
Sbjct: 45 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVL 104
Query: 154 DLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
L +N I ++ V AF GL SL +L L +N LT +P G F L +LR L + N
Sbjct: 105 QLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNN 157
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRY--PRLGLYTKCFAP 62
L +NNL+ LP +F L L L + N + CDC + WL WL+ Y +C AP
Sbjct: 273 LAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAP 332
Query: 63 SHIKGQNILDIPEHEFKCSGP--VEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
H++G+ ++++ + F+CS P ++ P +E R A+ + CR ++ V
Sbjct: 333 MHMRGRYLVEVDQASFQCSAPFIMDAPRDLNISEG------RMAE--LKCRTPPMSSVKW 384
Query: 121 LLPEATT 127
LLP T
Sbjct: 385 LLPNGTV 391
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 294 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
+CP C C++ V C +GL++VP +P T L M + ++ + + ++ +
Sbjct: 45 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHH---- 100
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+L +N I ++ AF L + L N +T +P AF +LR +
Sbjct: 101 --LEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLREL 152
>gi|194209260|ref|XP_001497986.2| PREDICTED: probable G-protein coupled receptor 125 [Equus caballus]
Length = 1211
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 64/126 (50%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N I+ + P AF L+R+DL+ N+I + D F+GL +L L L+ N + L
Sbjct: 50 LDLRNNLISSIDPGAFWGLSSLKRLDLTNNRIGCLNADVFRGLTNLVRLNLSGNLFSSLS 109
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
G F L LR+L +CDC++ W+HRW+K T+C P ++ Q + +
Sbjct: 110 QGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCVYPKSLQAQPVTGVK 169
Query: 249 EHEFKC 254
+ C
Sbjct: 170 QELLTC 175
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N + L G F L LR+L +CDC++ W+HRW+K T+C P
Sbjct: 100 LSGNLFSSLSQGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCVYPKS 159
Query: 65 IKGQNILDIPEHEFKCSGPVEKPT 88
++ Q + + + C P+E P+
Sbjct: 160 LQAQPVTGVKQELLTCDPPLELPS 183
>gi|119928549|dbj|BAF43100.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 171
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 80/169 (47%), Gaps = 11/169 (6%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C V C E+ L VP +P T LRL N IT+L P F + L +DL
Sbjct: 11 ACPARCSCQGTDVHCHERRLASVPAGIPTTTQILRLYINQITKLEPGVFDSLTLLTYLDL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
S NQ++ + F L LT L L +N L +P G F L L + + N + C C +
Sbjct: 71 SNNQLTALPTGVFDKLTQLTQLNLRDNQLKSIPRGAFDNLKSLTHIWLYNNPWDCACSDI 130
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L RW+ ++P + + P P+H +CSG++ R+
Sbjct: 131 LYLSRWISQHPGVVRRAEKGYPVD---------PDHA-RCSGTNTPVRA 169
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 18/118 (15%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTEL-TYMVSIDRV-----DKVLLYSYISN 347
+CP C C V C E+ L VP +P T L Y+ I ++ D + L +Y+
Sbjct: 11 ACPARCSCQGTDVHCHERRLASVPAGIPTTTQILRLYINQITKLEPGVFDSLTLLTYLD- 69
Query: 348 NFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N +T LP F +L ++ L N + +P AF N K L +
Sbjct: 70 -----------LSNNQLTALPTGVFDKLTQLTQLNLRDNQLKSIPRGAFDNLKSLTHI 116
>gi|351703407|gb|EHB06326.1| Putative G-protein coupled receptor 125, partial [Heterocephalus
glaber]
Length = 1218
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 65/126 (51%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N I+ + P AF L+R+DL+ N+I + D F+GL +L L L+ N + L
Sbjct: 24 LDLRNNLISNIDPGAFWGLSSLKRLDLTNNRIGCLNADIFRGLTNLVRLNLSGNLFSSLS 83
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
G F L LR+L + +CDC++ W+HRW+K T+C P ++ Q + +
Sbjct: 84 QGTFDYLGSLRSLEFQTDYLLCDCNILWMHRWVKERNITVRDTRCVYPKSLQAQPVTGVK 143
Query: 249 EHEFKC 254
+ C
Sbjct: 144 QELLTC 149
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N + L G F L LR+L + +CDC++ W+HRW+K T+C P
Sbjct: 74 LSGNLFSSLSQGTFDYLGSLRSLEFQTDYLLCDCNILWMHRWVKERNITVRDTRCVYPKS 133
Query: 65 IKGQNILDIPEHEFKCSGPVEKPT 88
++ Q + + + C P+E P+
Sbjct: 134 LQAQPVTGVKQELLTCDPPLELPS 157
>gi|76162374|gb|ABA40254.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 169
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 13/169 (7%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C + L VP +P T LRL N IT+L P F + +L ++L
Sbjct: 1 ACPSQCSCSGTTVNCDSRSLASVPAGIPTTTKILRLYINQITKLEPGVFDSLTQLTYLNL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
+ NQ++ + V F L LT L L+ N L +P G F L L + + N + C C +
Sbjct: 61 AVNQLTALPVGVFDKLTKLTHLALHINQLKSVPWGAFDNLKSLTQIYLFNNPWDCACSDI 120
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L RW ++P GL F ++ +CSG++ R+
Sbjct: 121 LYLSRWTSQHP--GLVFDGFG----------NVNPDSARCSGTNTPVRA 157
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTEL-TYMVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ V+C + L VP +P T L Y+ I +++ + S +
Sbjct: 1 ACPSQCSCSGTTVNCDSRSLASVPAGIPTTTKILRLYINQITKLEPGVFDSLTQLTY--- 57
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N +T LP F +L + L N + +P AF N K L ++
Sbjct: 58 ----LNLAVNQLTALPVGVFDKLTKLTHLALHINQLKSVPWGAFDNLKSLTQI 106
>gi|119928694|dbj|BAF43168.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 169
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 65/129 (50%), Gaps = 1/129 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C V C E+ L VP +P L L N IT+L F +L ++DL
Sbjct: 11 ACPAQCSCPGTDVHCHERSLGSVPAGIPTTALRLYLYTNQITKLELGVFDRLAQLTQLDL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
S NQ + + F L +L L LNNN LT +P G F L +L+ + + N + C C +
Sbjct: 71 SHNQFTALPARVFDRLVNLQKLALNNNQLTTVPKGAFDSLTKLQYIWLYSNPWDCACSDI 130
Query: 215 SWLHRWLKR 223
+L RW+ R
Sbjct: 131 LYLSRWISR 139
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C V C E+ L VP +P TT L + +++ K+ L F R
Sbjct: 11 ACPAQCSCPGTDVHCHERSLGSVPAGIP--TTALRLYLYTNQITKLEL-----GVFDRLA 63
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ L N T LP + F L+++ L N +T +P AF + +L+ +
Sbjct: 64 QLTQLDLSHNQFTALPARVFDRLVNLQKLALNNNQLTTVPKGAFDSLTKLQYI 116
>gi|348563307|ref|XP_003467449.1| PREDICTED: probable G-protein coupled receptor 125-like [Cavia
porcellus]
Length = 1496
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 64/126 (50%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N I+ + P AF L+R+DL+ N+I + D F+GL +L L L+ N + L
Sbjct: 285 LDLRNNLISSIDPGAFWGLSSLKRLDLTNNRIGCLNADIFRGLTNLVRLNLSGNLFSSLS 344
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
G F L LR+L +CDC++ W+HRW+K T+C P ++ Q + +
Sbjct: 345 QGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCVYPKSLQAQPVTGVK 404
Query: 249 EHEFKC 254
+ C
Sbjct: 405 QELLTC 410
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N + L G F L LR+L +CDC++ W+HRW+K T+C P
Sbjct: 335 LSGNLFSSLSQGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCVYPKS 394
Query: 65 IKGQNILDIPEHEFKCSGPVEKPT 88
++ Q + + + C P+E P+
Sbjct: 395 LQAQPVTGVKQELLTCDPPLELPS 418
>gi|37181732|gb|AAQ88673.1| GPR125 [Homo sapiens]
Length = 616
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 64/126 (50%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N I+ + P AF L+R+DL+ N+I + D F+GL +L L L+ N + L
Sbjct: 110 LDLRNNLISSIDPGAFWGLSSLKRLDLTNNRIGCLNADIFRGLTNLVRLNLSGNLFSSLS 169
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
G F L LR+L +CDC++ W+HRW+K T+C P ++ Q + +
Sbjct: 170 QGTFDYLASLRSLEFQTEYLLCDCNILWMHRWVKEKNITVRDTRCVYPKSLQAQPVTGVK 229
Query: 249 EHEFKC 254
+ C
Sbjct: 230 QELLTC 235
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N + L G F L LR+L +CDC++ W+HRW+K T+C P
Sbjct: 160 LSGNLFSSLSQGTFDYLASLRSLEFQTEYLLCDCNILWMHRWVKEKNITVRDTRCVYPKS 219
Query: 65 IKGQNILDIPEHEFKCSGPVEKPT 88
++ Q + + + C P+E P+
Sbjct: 220 LQAQPVTGVKQELLTCDPPLELPS 243
>gi|348521614|ref|XP_003448321.1| PREDICTED: leucine-rich repeat-containing G-protein coupled
receptor 6 [Oreochromis niloticus]
Length = 929
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 66/121 (54%), Gaps = 4/121 (3%)
Query: 90 ECAAEPSCPHPCRCA-DGI---VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFA 145
+ A CP PC C DGI VDC E GL+ VP L TT L L N+I+E+ P+AF
Sbjct: 31 QGTAATMCPSPCHCEEDGIFIMVDCSEMGLSSVPANLSPLTTYLDLSMNNISEIQPRAFH 90
Query: 146 NYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISE 205
L + +S NQ+ ++ AFQGL +L L L NN L LPD +L L +LR+
Sbjct: 91 RLHLLSELRISGNQLRYISGLAFQGLHNLKVLMLQNNQLERLPDDAPWDLPNLLSLRLDA 150
Query: 206 N 206
N
Sbjct: 151 N 151
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
LRL+ N ++ +P +AF + LR + L N ++++ V A L SL ++TL N +T++
Sbjct: 145 SLRLDANLLSVVPAEAFRGVRSLRHLWLDDNSLTEIPVMALDSLPSLQAMTLALNRITHI 204
Query: 188 PDGVFAELFRLRTLRISEN 206
PD F L L L + N
Sbjct: 205 PDYAFTNLSALVVLHLHNN 223
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 83/193 (43%), Gaps = 30/193 (15%)
Query: 107 IVDCREKGLNKVPILLPEATTELR---LEQNDITELPPKAFANYKRLRRIDLSKNQISKV 163
I+ GL+ +P+ L E LR L N I +LP +F + L+ I L NQI ++
Sbjct: 335 ILTLTRAGLSALPLDLCEQLPRLRVLELSYNQIEDLP--SFYHCSALQEIGLQHNQIRRI 392
Query: 164 AVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN--SFICDCHLSWLHRWL 221
FQ L SL +L L+ N + + FA L L L ++EN S I LS L L
Sbjct: 393 ESSTFQQLASLRALDLSWNMIESIHPDAFASLHSLVKLDLTENRLSSIPVVGLSALTH-L 451
Query: 222 KRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCP 281
K LY + F+P + ++++P Y +C Y SC
Sbjct: 452 KLRGNTELY-EAFSPDNFPHMRVIEMP-----------------YAYQCCV----YGSCD 489
Query: 282 VEKPTGECAAEPS 294
KP G+ +E S
Sbjct: 490 SYKPAGQWDSEQS 502
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 26/142 (18%)
Query: 288 ECAAEPSCPHPCRCA-DGI---VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYS 343
+ A CP PC C DGI VDC E GL+ VP L TT L +S++ + ++ +
Sbjct: 31 QGTAATMCPSPCHCEEDGIFIMVDCSEMGLSSVPANLSPLTTYLD--LSMNNISEIQPRA 88
Query: 344 Y----------ISNNFKRWTN----------RSRRLEQNDITELPPKAFANYKRLRRIRL 383
+ IS N R+ + + L+ N + LP A + L +RL
Sbjct: 89 FHRLHLLSELRISGNQLRYISGLAFQGLHNLKVLMLQNNQLERLPDDAPWDLPNLLSLRL 148
Query: 384 EQNDITELPPKAFANYKRLRRM 405
+ N ++ +P +AF + LR +
Sbjct: 149 DANLLSVVPAEAFRGVRSLRHL 170
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 12/118 (10%)
Query: 112 EKGLNKVPILLPEATTELR---LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAF 168
+ L ++P++ ++ L+ L N IT +P AF N L + L N I + F
Sbjct: 174 DNSLTEIPVMALDSLPSLQAMTLALNRITHIPDYAFTNLSALVVLHLHNNHIRSMGSRCF 233
Query: 169 QGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTL--------RISENSFICDCHLSWLH 218
+GL SL +L LN N+L P + L +L+ L I E +F+ + L +H
Sbjct: 234 EGLNSLETLDLNYNDLQEFPVAI-RTLSKLQELGFHNNNIKAIPERAFVGNPQLQTIH 290
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 110/285 (38%), Gaps = 30/285 (10%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
L L+ N +TE+P A + L+ + L+ N+I+ + AF L +L L L+NN++ +
Sbjct: 169 HLWLDDNSLTEIPVMALDSLPSLQAMTLALNRITHIPDYAFTNLSALVVLHLHNNHIRSM 228
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDI 247
F L L TL ++ N R L + LG + NI I
Sbjct: 229 GSRCFEGLNSLETLDLNYNDLQ---EFPVAIRTLSKLQELGFHNN----------NIKAI 275
Query: 248 PEHEFKCSGSSMETRSKIYREECSTDF---HPYNSCPVEKPTGECAAEPSCPHP---CRC 301
PE F ++T I+ E F + P A P
Sbjct: 276 PERAF-VGNPQLQT---IHFYENPIQFVGKSAFQFLPKLHTLSLNGATQIREFPDLKGTT 331
Query: 302 ADGIVDCREKGLNKVPILLPEATTELTYM-VSIDRVDKVLLYSYISNNFKRWTNRSRRLE 360
+ I+ GL+ +P+ L E L + +S ++++ + + + S + L+
Sbjct: 332 SLEILTLTRAGLSALPLDLCEQLPRLRVLELSYNQIEDLPSFYHCS------ALQEIGLQ 385
Query: 361 QNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N I + F LR + L N I + P AFA+ L ++
Sbjct: 386 HNQIRRIESSTFQQLASLRALDLSWNMIESIHPDAFASLHSLVKL 430
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 30/135 (22%)
Query: 102 RCADGI-----VDCREKGLNKVPILLPEAT--TELRLEQNDITELPPKAFANYKRLRRID 154
RC +G+ +D L + P+ + + EL N+I +P +AF +L+ I
Sbjct: 231 RCFEGLNSLETLDLNYNDLQEFPVAIRTLSKLQELGFHNNNIKAIPERAFVGNPQLQTIH 290
Query: 155 LSKNQISKVAVDAFQ-----------------------GLKSLTSLTLNNNNLTYLPDGV 191
+N I V AFQ G SL LTL L+ LP +
Sbjct: 291 FYENPIQFVGKSAFQFLPKLHTLSLNGATQIREFPDLKGTTSLEILTLTRAGLSALPLDL 350
Query: 192 FAELFRLRTLRISEN 206
+L RLR L +S N
Sbjct: 351 CEQLPRLRVLELSYN 365
>gi|327281886|ref|XP_003225676.1| PREDICTED: leucine-rich repeat-containing G-protein coupled
receptor 4-like [Anolis carolinensis]
Length = 957
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 87 PTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFA 145
P+G ++ P CP PC C DG DC +GL +P L T L + N+IT LP AF
Sbjct: 25 PSGGASSGP-CPAPCTCDGDGGTDCSGRGLAALPHGLSAFTHSLDISMNNITRLPEDAFK 83
Query: 146 NYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISE 205
N+ L + L+ N ++ + A GLK L LTL NN L +P+G L L++LR+
Sbjct: 84 NFPYLEELRLAGNDLAFIHPKALSGLKELRVLTLQNNQLKTVPNGAIRGLSGLQSLRLDA 143
Query: 206 N 206
N
Sbjct: 144 N 144
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 51/122 (41%), Gaps = 32/122 (26%)
Query: 285 PTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYS 343
P+G ++ P CP PC C DG DC +GL LP + T+ + I
Sbjct: 25 PSGGASSGP-CPAPCTCDGDGGTDCSGRGLAA----LPHGLSAFTHSLDI---------- 69
Query: 344 YISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLR 403
N+IT LP AF N+ L +RL ND+ + PKA + K LR
Sbjct: 70 ----------------SMNNITRLPEDAFKNFPYLEELRLAGNDLAFIHPKALSGLKELR 113
Query: 404 RM 405
+
Sbjct: 114 VL 115
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 37/218 (16%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
++ NN+T LP+ F L LR++ N L+++H P+ A S
Sbjct: 69 ISMNNITRLPEDAFKNFPYLEELRLAGND------LAFIH------PK--------ALSG 108
Query: 65 IKGQNILDIPEHEFKC--SGPVEKPTGECAAEPSCPH----PCRCADGIVDCR-----EK 113
+K +L + ++ K +G + +G + H P +G+V R +
Sbjct: 109 LKELRVLTLQNNQLKTVPNGAIRGLSGLQSLRLDANHITAVPEDSFEGLVQLRHLWLDDN 168
Query: 114 GLNKVPIL----LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ 169
L +VP++ LP + L L N IT++P AF N L + L N+I + F
Sbjct: 169 NLTEVPVIPLSNLP-SLQALTLALNKITDIPDFAFTNLSSLVVLHLHNNKIKTLGHHCFD 227
Query: 170 GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENS 207
GL +L +L LN NN+ P+ + L L+ L NS
Sbjct: 228 GLNNLETLDLNYNNMVEFPEAI-KTLPSLKELGFHSNS 264
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
E+ L+ N I E+ F LR +DLS+N I ++ +AF L ++T+L L+ N LT
Sbjct: 374 EIYLQHNQIEEIREDTFQGLASLRTLDLSRNLIHQIHKEAFTTLGAITNLDLSFNALTSF 433
Query: 188 PDGVFAELFRLRTLRISE 205
P G + L +L+ + +E
Sbjct: 434 PTGSLSGLNQLKLVGNTE 451
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N+I ++P +F L I L NQI ++ D FQGL SL +L L+ N + +
Sbjct: 353 LDLSYNNIKQIP--SFKGCSSLEEIYLQHNQIEEIREDTFQGLASLRTLDLSRNLIHQIH 410
Query: 189 DGVFAELFRLRTLRISENSF 208
F L + L +S N+
Sbjct: 411 KEAFTTLGAITNLDLSFNAL 430
>gi|432848606|ref|XP_004066429.1| PREDICTED: leucine-rich repeat-containing protein 3-like [Oryzias
latipes]
Length = 254
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 80/158 (50%), Gaps = 8/158 (5%)
Query: 96 SCPHPCRCAD---GIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRR 152
+CP C C + +V C + L +P LP+ T L L N I +P +A A+ +RLR
Sbjct: 27 ACPKVCHCTERNGVVVQCTSRNLESIPSELPKDTVVLLLSSNRIRRVPKEALADLRRLRE 86
Query: 153 IDLSKNQISKVAVDAFQGLK-SLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICD 211
+DLS N + V AF G+ SL SL L+NN L+ LP F +L +R+S+N + C+
Sbjct: 87 LDLSHNSLESVEDGAFAGVADSLRSLDLSNNQLSRLPRDTFTKLH--AQVRLSQNPWHCE 144
Query: 212 CHLSWLHRWLKRYPRLGLYTKCFAP--SHIKGQNILDI 247
C L + R L+ P CF GQ ++ +
Sbjct: 145 CSLQEVLRELRLDPETVNEVSCFTSVREEYVGQPVIQV 182
>gi|148665304|gb|EDK97720.1| carboxypeptidase N, polypeptide 2 [Mus musculus]
Length = 574
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 109/258 (42%), Gaps = 20/258 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFI-CDCHL-----SWLHRWLKRYPRLGLYTK 58
L+NN L LP+G L L+ L + N+ HL S WL+ L
Sbjct: 227 LSNNMLARLPEGALGSLSSLQELFLDGNAITELSPHLFSQLFSLEMLWLQHNAICHLPVS 286
Query: 59 CFAPSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKV 118
F+ H L + ++ + P G A H + + E +
Sbjct: 287 LFSSLH--NLTFLSLKDNALRT-----LPEGLFAHNQGLLHLSLSYNQLETIPEGAFTNL 339
Query: 119 PILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLT 178
L+ L L N IT+LP F N ++L ++ L N ++ + F L L L
Sbjct: 340 SRLV-----SLTLSHNAITDLPEHVFRNLEQLVKLSLDSNNLTALHPALFHNLSRLQLLN 394
Query: 179 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL--GLYTKCFAP 236
L+ N LT LP G+F + L L + N + CDCHLS+L WL+ Y +T C P
Sbjct: 395 LSRNQLTTLPGGIFDTNYDLFNLALLGNPWQCDCHLSYLTSWLRLYNNQISNTHTFCAGP 454
Query: 237 SHIKGQNILDIPEHEFKC 254
+++KGQ + ++ + + C
Sbjct: 455 AYLKGQLVPNLKQEQLIC 472
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 111/280 (39%), Gaps = 40/280 (14%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L L+ + + LP F + L + L NQ+ + FQ L+ L +L L N LT L
Sbjct: 152 KLTLDFDRLAGLPEDLFCHMDILESLQLQGNQLRTLPGRLFQSLRDLRTLNLAQNLLTQL 211
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT-KCFAPSHIKGQNILD 246
P G F L L+ L++S N L R P L + + G I +
Sbjct: 212 PKGAFQSLTGLQMLKLSNN-------------MLARLPEGALGSLSSLQELFLDGNAITE 258
Query: 247 IPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIV 306
+ H F S+E + C ++S H +
Sbjct: 259 LSPHLFS-QLFSLEMLWLQHNAICHLPVSLFSSL----------------HNLT----FL 297
Query: 307 DCREKGLNKVPILLPEATTELTYM-VSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
++ L +P L L ++ +S ++++ + ++ N R S L N IT
Sbjct: 298 SLKDNALRTLPEGLFAHNQGLLHLSLSYNQLETIPEGAF--TNLSRLV--SLTLSHNAIT 353
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+LP F N ++L ++ L+ N++T L P F N RL+ +
Sbjct: 354 DLPEHVFRNLEQLVKLSLDSNNLTALHPALFHNLSRLQLL 393
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/351 (19%), Positives = 125/351 (35%), Gaps = 72/351 (20%)
Query: 97 CPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDIT------------------- 137
CP C C V C ++ L +P +P T++ + T
Sbjct: 49 CPVGCDCFGREVFCSDEQLADIPPDIPPHITDIVFVETAFTTVRTRAFSGSPNLTKVVFL 108
Query: 138 -----ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
L P AF RL+ ++++ + +S ++ F L SL LTL+ + L LP+ +F
Sbjct: 109 NTQVRHLEPDAFGGLPRLQDLEITGSPVSNLSAHIFSNLSSLEKLTLDFDRLAGLPEDLF 168
Query: 193 AELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFAPSHIKGQNILDIPEHE 251
+ L +L++ N L+ P RL + ++ + +P+
Sbjct: 169 CHMDILESLQLQGNQ-------------LRTLPGRLFQSLRDLRTLNLAQNLLTQLPKGA 215
Query: 252 FKC-SGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVD--- 307
F+ +G M S N+ P G + S + I +
Sbjct: 216 FQSLTGLQMLKLS--------------NNMLARLPEGALGSLSSLQELFLDGNAITELSP 261
Query: 308 -------------CREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN 354
+ + +P+ L + LT++ D + L ++N
Sbjct: 262 HLFSQLFSLEMLWLQHNAICHLPVSLFSSLHNLTFLSLKDNALRTLPEGLFAHNQGLL-- 319
Query: 355 RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P AF N RL + L N IT+LP F N ++L ++
Sbjct: 320 -HLSLSYNQLETIPEGAFTNLSRLVSLTLSHNAITDLPEHVFRNLEQLVKL 369
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 18/144 (12%)
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
I G + ++ H F +EK T + P C I++
Sbjct: 131 ITGSPVSNLSAHIFSNLSSLEKLTLDFDRLAGLPEDLFCHMDILE--------------- 175
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL 184
L+L+ N + LP + F + + LR ++L++N ++++ AFQ L L L L+NN L
Sbjct: 176 ---SLQLQGNQLRTLPGRLFQSLRDLRTLNLAQNLLTQLPKGAFQSLTGLQMLKLSNNML 232
Query: 185 TYLPDGVFAELFRLRTLRISENSF 208
LP+G L L+ L + N+
Sbjct: 233 ARLPEGALGSLSSLQELFLDGNAI 256
>gi|119928639|dbj|BAF43142.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 171
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 65/133 (48%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C K L VP +P T EL L N IT+L P F + L+ + L
Sbjct: 11 ACPARCSCSGTTVNCGGKSLASVPAGIPTTTGELYLHSNQITKLEPGVFDHLANLQHLYL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
NQ+S + V F L LT L L +N L +PDG F L L N + C+C +
Sbjct: 71 GDNQLSALPVGVFDKLTQLTILGLRDNQLKTIPDGAFDRLSSLTHAYFFGNPWDCECRDI 130
Query: 215 SWLHRWLKRYPRL 227
+L W+ + +
Sbjct: 131 MYLRNWVADHTSI 143
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 39/109 (35%), Gaps = 30/109 (27%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C K L VP +P T EL
Sbjct: 11 ACPARCSCSGTTVNCGGKSLASVPAGIPTTTGEL-------------------------- 44
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
L N IT+L P F + L+ + L N ++ LP F +L
Sbjct: 45 ----YLHSNQITKLEPGVFDHLANLQHLYLGDNQLSALPVGVFDKLTQL 89
>gi|348505623|ref|XP_003440360.1| PREDICTED: immunoglobulin superfamily containing leucine-rich
repeat protein 2-like [Oreochromis niloticus]
Length = 711
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 84/210 (40%), Gaps = 57/210 (27%)
Query: 96 SCPHPCRCAD----GIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKR-- 149
+CP C C D I DC K L +VP+ LP T + L N I L K+F N +
Sbjct: 21 TCPEQCSCQDKFSHQIADCAYKDLLEVPVGLPSNVTTVSLSANKIQILKSKSFVNITQAT 80
Query: 150 ----------------------LRRIDLSKNQISK------------------------V 163
LR D+S N+I +
Sbjct: 81 SLWLAHNDIVTIERGTLAPLVQLRNFDISHNKIVNFPWADLRGLTALQLLKMNNNEMVNL 140
Query: 164 AVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKR 223
DAF LK L SL +NNN T + +G F+ L + L+I N F+C C L WL W+
Sbjct: 141 PKDAFSTLKDLRSLRINNNRFTTIVEGTFSALTAMSHLQIFSNPFVCSCRLQWLRDWITT 200
Query: 224 YPRLGL----YTKCFAPSHIKGQNILDIPE 249
++ + C AP H+KG + IP+
Sbjct: 201 -TKISVPEPNSIVCEAPEHLKGTMVSSIPK 229
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 15/147 (10%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGL----YTKCF 60
+NNN T + +G F+ L + L+I N F+C C L WL W+ ++ + C
Sbjct: 156 INNNRFTTIVEGTFSALTAMSHLQIFSNPFVCSCRLQWLRDWITT-TKISVPEPNSIVCE 214
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
AP H+KG + IP + C P T + E + + I++C KG K
Sbjct: 215 APEHLKGTMVSSIP--KLDCEPPAVTITYQPNIENTDLYEGIMV--ILNCETKGSPK--- 267
Query: 121 LLPEATTELRL-EQNDITELPPKAFAN 146
P+ T E+ QND+ LP N
Sbjct: 268 --PQITWEVTAGNQNDLFPLPSTGEIN 292
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 51/134 (38%), Gaps = 22/134 (16%)
Query: 294 SCPHPCRCAD----GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNF 349
+CP C C D I DC K L +VP+ LP T ++ + ++ K + I+
Sbjct: 21 TCPEQCSCQDKFSHQIADCAYKDLLEVPVGLPSNVTTVSLSANKIQILKSKSFVNITQAT 80
Query: 350 KRWTN------------------RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITEL 391
W R+ + N I P L+ +++ N++ L
Sbjct: 81 SLWLAHNDIVTIERGTLAPLVQLRNFDISHNKIVNFPWADLRGLTALQLLKMNNNEMVNL 140
Query: 392 PPKAFANYKRLRRM 405
P AF+ K LR +
Sbjct: 141 PKDAFSTLKDLRSL 154
>gi|431911734|gb|ELK13882.1| Leucine-rich repeat-containing protein 4 [Pteropus alecto]
Length = 652
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 2/131 (1%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL + N E+ P +F L+++ + +Q+S + +AF GL SL L L +NNL+ L
Sbjct: 221 ELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSL 280
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAPSHIKGQNIL 245
P +F L L L + N + CDC + WL WL+ Y +C AP H++G+ ++
Sbjct: 281 PHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAPLHMRGRYLV 340
Query: 246 DIPEHEFKCSG 256
++ + F+CS
Sbjct: 341 EVDQASFQCSA 351
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 96 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRI 153
+CP C C++ V C +GL++VP +P T L L +N+I + F + L +
Sbjct: 44 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVL 103
Query: 154 DLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
L +N I ++ V AF GL SL +L L +N LT +P G F L +LR L + N
Sbjct: 104 QLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNN 156
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAP 62
L +NNL+ LP +F L L L + N + CDC + WL WL+ Y +C AP
Sbjct: 272 LAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAP 331
Query: 63 SHIKGQNILDIPEHEFKCSGP--VEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
H++G+ ++++ + F+CS P ++ P +E R A+ + CR ++ V
Sbjct: 332 LHMRGRYLVEVDQASFQCSAPFIMDAPRDLNISE------GRMAE--LKCRTPPMSSVKW 383
Query: 121 LLPEATT 127
LLP T
Sbjct: 384 LLPNGTV 390
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 294 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
+CP C C++ V C +GL++VP +P T L M + ++ + + ++ +
Sbjct: 44 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHH---- 99
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+L +N I ++ AF L + L N +T +P AF +LR +
Sbjct: 100 --LEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLREL 151
>gi|296196803|ref|XP_002745992.1| PREDICTED: probable G-protein coupled receptor 125 [Callithrix
jacchus]
Length = 1318
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 64/127 (50%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N I+ + P AF L+R+DL+ N+I + D F+GL +L L L+ N + L
Sbjct: 108 LDLRNNLISSIDPGAFWGLSSLKRLDLTNNRIGCLNADIFRGLTNLVRLNLSGNLFSSLS 167
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
G F L LR+L +CDC++ W+HRW+K T+C P ++ Q + +
Sbjct: 168 QGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKERNVTVRDTRCVYPKSLQAQPVTGVK 227
Query: 249 EHEFKCS 255
+ C
Sbjct: 228 QELLTCG 234
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N + L G F L LR+L +CDC++ W+HRW+K T+C P
Sbjct: 158 LSGNLFSSLSQGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKERNVTVRDTRCVYPKS 217
Query: 65 IKGQNILDIPEHEFKCSGPVEKPT 88
++ Q + + + C P+E P+
Sbjct: 218 LQAQPVTGVKQELLTCGPPLELPS 241
>gi|284010924|dbj|BAI66937.1| variable lymphocyte receptor B [Eptatretus burgeri]
Length = 204
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 83/183 (45%), Gaps = 20/183 (10%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C ++ L VP +P +TT L L+QN + LP F +L + L
Sbjct: 23 ACPSRCSCSGTSVNCNQESLTSVPTGIPGSTTYLDLQQNKLQSLPSGVFDKLTQLTTLHL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNN-LTYLPDGVFAELFRLRTLRISENSF------ 208
S N++ + F L LT L L++NN L +LP GVF +L +L+ L + N
Sbjct: 83 SSNKLQSIPSGVFDKLTQLTWLELDDNNVLHFLPSGVFDKLTKLKHLELDNNQLKSVPDG 142
Query: 209 ----ICDCHLSWLHR--WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETR 262
+ WLH W PR+ ++ + K Q KCSGS R
Sbjct: 143 IFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQG-------SAKCSGSGKPVR 195
Query: 263 SKI 265
S I
Sbjct: 196 SII 198
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 9/114 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C ++ L VP +P +TT L + + L S S F + T
Sbjct: 23 ACPSRCSCSGTSVNCNQESLTSVPTGIPGSTTYL-------DLQQNKLQSLPSGVFDKLT 75
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITE-LPPKAFANYKRLRRM 405
+ L N + +P F +L + L+ N++ LP F +L+ +
Sbjct: 76 QLTTLHLSSNKLQSIPSGVFDKLTQLTWLELDDNNVLHFLPSGVFDKLTKLKHL 129
>gi|296217800|ref|XP_002755174.1| PREDICTED: leucine-rich repeat-containing G-protein coupled
receptor 4 isoform 2 [Callithrix jacchus]
Length = 927
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 69/123 (56%), Gaps = 3/123 (2%)
Query: 87 PTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFA 145
P+G AA P C PC C D VDC KGL VP L T L+L ND++ + P A +
Sbjct: 21 PSG--AAPPLCAAPCSCDGDRRVDCSGKGLTAVPEGLSAFTQALQLAGNDLSFIHPNALS 78
Query: 146 NYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISE 205
K L+ + L NQ+ V +A +GL +L SL L+ N++T +P+ F L +LR L + +
Sbjct: 79 GLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFKGLVQLRHLWLDD 138
Query: 206 NSF 208
NS
Sbjct: 139 NSL 141
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 21/140 (15%)
Query: 285 PTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPE-------ATTELTYM--VSID 334
P+G AA P C PC C D VDC KGL VP L A +L+++ ++
Sbjct: 21 PSG--AAPPLCAAPCSCDGDRRVDCSGKGLTAVPEGLSAFTQALQLAGNDLSFIHPNALS 78
Query: 335 RVDKVLLYSYISNNFKRWTN---------RSRRLEQNDITELPPKAFANYKRLRRIRLEQ 385
+ ++ + + +N K + +S RL+ N IT +P +F +LR + L+
Sbjct: 79 GLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFKGLVQLRHLWLDD 138
Query: 386 NDITELPPKAFANYKRLRRM 405
N +TE+P +N L+ +
Sbjct: 139 NSLTEVPVHPLSNLPTLQAL 158
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
L L+ N +TE+P +N L+ + L+ N+IS + AF L SL L L+NN + L
Sbjct: 133 HLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSL 192
Query: 188 PDGVFAELFRLRTLRISENSF 208
F L L TL ++ N+
Sbjct: 193 SQHCFHGLDNLETLDLNYNNL 213
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N I+ +P AF N L + L N+I ++ F GL +L +L LN NNL P
Sbjct: 158 LTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFHGLDNLETLDLNYNNLGEFP 217
Query: 189 DGVFAELFRLRTLRISENS 207
+ A L L+ L NS
Sbjct: 218 QAIKA-LPSLKELGFHSNS 235
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
A E+ L++N I ++ F LR +DLS+N I ++ + AF L +T+L ++ N
Sbjct: 341 HALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIHIRAFATLGPITNLDVSFNE 400
Query: 184 LTYLP 188
LT P
Sbjct: 401 LTSFP 405
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N+I +LP +F L I L +NQI ++ FQGL SL L L+ N + +
Sbjct: 324 LDLSYNNIRDLP--SFNGCHALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIH 381
Query: 189 DGVFAELFRLRTLRISEN 206
FA L + L +S N
Sbjct: 382 IRAFATLGPITNLDVSFN 399
>gi|119603714|gb|EAW83308.1| leucine rich repeat containing 17, isoform CRA_b [Homo sapiens]
Length = 312
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 121/291 (41%), Gaps = 46/291 (15%)
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
+DC+E+ L V P+ + L +N I L F+ +K+L+ +DL +N+ISK+ +A
Sbjct: 65 LDCQERKLVYVLPGWPQDLLHMLLARNKIRTLKNNMFSKFKKLKSLDLQQNEISKIESEA 124
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYP 225
F GL LT+L L +N + L + VF L LR+ +N + C C + L L+ R
Sbjct: 125 FFGLNKLTTLLLQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCEIETLISMLQIPRNR 184
Query: 226 RLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKP 285
LG Y KC +P K + + I + C+ +E+ PV KP
Sbjct: 185 NLGNYAKCESPQEQKNKKLRQIKSEQL-CNEE---------KEQLDPKPQVSGRPPVIKP 234
Query: 286 TGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYI 345
+ + P + +DC+ K L KVP +P +L
Sbjct: 235 EVDSTFCHNYVFPIQT----LDCKRKELKKVPNNIPPDIVKLD----------------- 273
Query: 346 SNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L N I +L PK F + L+++ L N I + P +
Sbjct: 274 -------------LSYNKINQLRPKEFEDVHELKKLNLSSNGIEFIDPGSL 311
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 14/169 (8%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +N + L + VF L LR+ +N + C C + L L+ R LG Y KC +P
Sbjct: 136 LQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCEIETLISMLQIPRNRNLGNYAKCESP 195
Query: 63 SHIKGQNILDIPEHEFKCSGPVEK--PTGECAAEPSCPHP----CRCADGI-----VDCR 111
K + + I + C+ E+ P + + P P C + + +DC+
Sbjct: 196 QEQKNKKLRQIKSEQL-CNEEKEQLDPKPQVSGRPPVIKPEVDSTFCHNYVFPIQTLDCK 254
Query: 112 EKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQI 160
K L KVP +P +L L N I +L PK F + L++++LS N I
Sbjct: 255 RKELKKVPNNIPPDIVKLDLSYNKINQLRPKEFEDVHELKKLNLSSNGI 303
>gi|320165721|gb|EFW42620.1| tyrosine-protein kinase Src42A [Capsaspora owczarzaki ATCC 30864]
Length = 1020
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 61/106 (57%)
Query: 101 CRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQI 160
C C+ +V+C K L +P +P ATT+L L N IT +P +FA L + + NQ+
Sbjct: 35 CSCSGTVVNCYGKSLTAIPSGIPTATTDLTLWNNLITSIPAGSFAGLTALTFLRIDSNQL 94
Query: 161 SKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
+ ++ + F GL +LT L LNNN +T +P F+ L L L +++N
Sbjct: 95 TSLSANTFTGLSALTQLALNNNGITSIPASAFSGLTALHNLYLNDN 140
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 80/203 (39%), Gaps = 30/203 (14%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
TL NN +T +P G FA L L LRI N L+ L + L T+
Sbjct: 64 TLWNNLITSIPAGSFAGLTALTFLRIDSN------QLTSLSA--NTFTGLSALTQL---- 111
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+ I IP F +G A H D ++ ++
Sbjct: 112 ALNNNGITSIPASAF---------SGLTAL-----HNLYLNDNVI----TSISADAFTNL 153
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
A L + N IT LP AFAN L ++ L N I+ ++ DAF GL +L L L +N
Sbjct: 154 TALNYLVMHNNQITSLPASAFANQTALTQLFLFNNSITSISADAFTGLSALVYLALYSNR 213
Query: 184 LTYLPDGVFAELFRLRTLRISEN 206
+T + FA L L L + N
Sbjct: 214 ITSISATAFASLTTLNYLYLHAN 236
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
A T+L L N IT +P AF+ L + L+ N I+ ++ DAF L +L L ++NN
Sbjct: 106 SALTQLALNNNGITSIPASAFSGLTALHNLYLNDNVITSISADAFTNLTALNYLVMHNNQ 165
Query: 184 LTYLPDGVFAELFRLRTLRISENSF 208
+T LP FA L L + NS
Sbjct: 166 ITSLPASAFANQTALTQLFLFNNSI 190
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 53/125 (42%), Gaps = 18/125 (14%)
Query: 299 CRCADGIVDCREKGLNKVPILLPEATTELTY-----------------MVSIDRVDKVLL 341
C C+ +V+C K L +P +P ATT+LT ++ R+D L
Sbjct: 35 CSCSGTVVNCYGKSLTAIPSGIPTATTDLTLWNNLITSIPAGSFAGLTALTFLRIDSNQL 94
Query: 342 YSYISNNFKRWTNRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYK 400
S +N F + ++ L N IT +P AF+ L + L N IT + AF N
Sbjct: 95 TSLSANTFTGLSALTQLALNNNGITSIPASAFSGLTALHNLYLNDNVITSISADAFTNLT 154
Query: 401 RLRRM 405
L +
Sbjct: 155 ALNYL 159
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 36/72 (50%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
A L L N IT + AFA+ L + L NQI+ + AF L +L L LN+N
Sbjct: 202 SALVYLALYSNRITSISATAFASLTTLNYLYLHANQITSIPAGAFTSLTALILLPLNDNP 261
Query: 184 LTYLPDGVFAEL 195
T LP G+F L
Sbjct: 262 FTTLPPGLFKGL 273
>gi|158286012|ref|XP_308561.4| AGAP007237-PA [Anopheles gambiae str. PEST]
gi|157020264|gb|EAA04206.4| AGAP007237-PA [Anopheles gambiae str. PEST]
Length = 1514
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 89/186 (47%), Gaps = 27/186 (14%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
CP C C V C ++ L+KVP + P+ T+ + L N I E+P AF + L I L
Sbjct: 39 GCPQKCSCQQRTVRCVKQQLDKVPEMPPD-TSIIDLRYNHIREVPTGAFDGLQHLHTIFL 97
Query: 156 SKNQISKV------------------------AVDAFQGLKSLTSLTLNNNNLTYLPDGV 191
++NQ++K+ A DAF L L S+ L+ N + +P+G
Sbjct: 98 NENQLTKIHSGAFRDLPSLKYLYLNRNRIGTIAADAFISLSRLHSIYLHGNQIKTIPEGS 157
Query: 192 FAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTK--CFAPSHIKGQNILDIPE 249
F L LR LR+ +N+ CDC L W R +++ R L C P ++GQ I I E
Sbjct: 158 FERLPSLRRLRLDDNALECDCSLLWFVRTMQQPNRKSLVAGATCATPPALEGQPISSITE 217
Query: 250 HEFKCS 255
+F C+
Sbjct: 218 EDFHCA 223
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 77/180 (42%), Gaps = 11/180 (6%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTK--CFAP 62
L+ N + +P+G F L LR LR+ +N+ CDC L W R +++ R L C P
Sbjct: 145 LHGNQIKTIPEGSFERLPSLRRLRLDDNALECDCSLLWFVRTMQQPNRKSLVAGATCATP 204
Query: 63 SHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILL 122
++GQ I I E +F C+ P E +P + C+ G + I+
Sbjct: 205 PALEGQPISSITEEDFHCAKP------EIVVQPRDIEISYGQTAVFSCKASGDPRPEIVW 258
Query: 123 PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLT-SLTLNN 181
+ + +R E + L P + D Q + +A ++ +S T SL +NN
Sbjct: 259 LQEGSPIRSESDGRITLLPDGSLRIDEIVPAD--AGQYACIARNSLGESRSRTASLAVNN 316
>gi|73970928|ref|XP_538650.2| PREDICTED: leucine-rich repeat transmembrane neuronal protein 2
isoform 1 [Canis lupus familiaris]
Length = 516
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 76/161 (47%), Gaps = 12/161 (7%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP CRC + C +G VP + + L L N ITEL FA++ +L
Sbjct: 29 ALGMACPPKCRCEKLLFYCDSQGFRSVPNATDKGSLGLSLRHNHITELERDQFASFSQLT 88
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICD 211
+ L NQIS V DAFQGL L L L++N + YLP+ F +L L+ L +S N
Sbjct: 89 WLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFN----- 143
Query: 212 CHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
LS LH P L + H++ ++ IP F
Sbjct: 144 -QLSSLH------PELFYGLRKLQTLHLRSNSLRTIPVRLF 177
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 106/258 (41%), Gaps = 24/258 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N + YLP+ F +L L+ L +S N LS LH P L + H
Sbjct: 116 LSSNKIFYLPNTTFTQLINLQNLDLSFN------QLSSLH------PELFYGLRKLQTLH 163
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL--------N 116
++ ++ IP F +E S G++ RE L N
Sbjct: 164 LRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLAR--NGFAGLIKLRELHLEHNQLTKIN 221
Query: 117 KVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
L + L L+ N I+ L + L ++DL+ N+I + + F+ + +L
Sbjct: 222 FAHFLRLSSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKI 281
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFA 235
L ++NN L L + L L T+ +S N + C + L WL + R C +
Sbjct: 282 LLMDNNKLNSLDSKILNSLRSLTTVGLSGNLWECSPRICALASWLGSFQGRWEHSILCHS 341
Query: 236 PSHIKGQNILDIPEHEFK 253
P H +G++ILD H F+
Sbjct: 342 PDHTQGEDILD-AVHGFQ 358
>gi|348510548|ref|XP_003442807.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 1-like [Oreochromis niloticus]
Length = 983
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 129 LRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLT 185
L L+ NDI+ E AF+ L ++ L +N+I VA AF GL++L L L N +
Sbjct: 292 LELDHNDISGTIEDTNGAFSGLDSLIKLTLFENKIKSVAKKAFSGLETLEHLNLGENAIR 351
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAPSHIKGQNI 244
+ F ++ L++L I NS +CDC L WL WL R ++G+ C P +KG+++
Sbjct: 352 SIQPDAFTKMRNLKSLLIQSNSLLCDCQLHWLPDWLVARGLQVGINATCAHPESLKGKSV 411
Query: 245 LDIPEHEFKC 254
++P F C
Sbjct: 412 FEVPPSSFVC 421
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 93/215 (43%), Gaps = 25/215 (11%)
Query: 3 RTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAP 62
R L +N LT + FA L LR LR+ H L P LG
Sbjct: 5 RNLGHNKLTSISPEAFANLPNLRELRLD-------------HNELTSIPDLGQAASKIVS 51
Query: 63 SHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL--NKVPI 120
++ I I VE T + + +C + R+ L NK+ +
Sbjct: 52 LYLHHNKIRSIDGRRTGELLSVE--TLDLSNNDITELRGQCFPAGLHIRDLYLSNNKISV 109
Query: 121 L-------LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKS 173
L L E LRL +N I+++P KAF RL +++L++N+I +V FQGL S
Sbjct: 110 LELGALDHLGETLQVLRLSRNRISQIPVKAF-QLPRLTQLELNRNRIRQVEGLTFQGLSS 168
Query: 174 LTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
L L L N+++ L DG F +L +++ L + NS
Sbjct: 169 LEVLKLQRNSISKLTDGAFFDLAKMKVLHLDYNSL 203
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAPS 63
L N + + F ++ L++L I NS +CDC L WL WL R ++G+ C P
Sbjct: 345 LGENAIRSIQPDAFTKMRNLKSLLIQSNSLLCDCQLHWLPDWLVARGLQVGINATCAHPE 404
Query: 64 HIKGQNILDIPEHEFKC 80
+KG+++ ++P F C
Sbjct: 405 SLKGKSVFEVPPSSFVC 421
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L+ N +TE+ + L+++ LS N I+++ D ++ + L L L+ NNLT L
Sbjct: 196 LHLDYNSLTEVNSGSLYGLTSLQQLFLSNNSIARINPDGWKFCQKLRELNLSYNNLTRLD 255
Query: 189 DGVFAELFRLRTLRISENSF 208
+G A L L TLR+ NS
Sbjct: 256 EGSLAVLGDLHTLRLGHNSI 275
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 357 RRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYK 400
R L N +T + P+AFAN LR +RL+ N++T +P A K
Sbjct: 5 RNLGHNKLTSISPEAFANLPNLRELRLDHNELTSIPDLGQAASK 48
>gi|403285325|ref|XP_003933981.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 2
isoform 1 [Saimiri boliviensis boliviensis]
Length = 516
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 76/161 (47%), Gaps = 12/161 (7%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP CRC + C +G VP + + L L N ITEL FA++ +L
Sbjct: 29 ALGMACPPKCRCEKLLFYCDSQGFRSVPNTTDKGSLGLSLRHNHITELERDQFASFSQLT 88
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICD 211
+ L NQIS V DAFQGL L L L++N + YLP+ F +L L+ L +S N
Sbjct: 89 WLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFN----- 143
Query: 212 CHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
LS LH P L + H++ ++ IP F
Sbjct: 144 -QLSSLH------PELFYGLRKLQTLHLRSNSLRTIPVRLF 177
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 106/258 (41%), Gaps = 24/258 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N + YLP+ F +L L+ L +S N LS LH P L + H
Sbjct: 116 LSSNKIFYLPNTTFTQLINLQNLDLSFN------QLSSLH------PELFYGLRKLQTLH 163
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL--------N 116
++ ++ IP F +E S G++ RE L N
Sbjct: 164 LRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLAR--NGFAGLIKLRELHLEHNQLTKIN 221
Query: 117 KVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
L + L L+ N I+ L + L ++DL+ N+I + + F+ + +L
Sbjct: 222 FAHFLRLSSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKI 281
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFA 235
L ++NN L L + L L T+ +S N + C + L WL + R C +
Sbjct: 282 LLMDNNKLNSLDSKILNSLRSLTTVGLSGNLWECSARICALASWLGSFQGRWEHSILCHS 341
Query: 236 PSHIKGQNILDIPEHEFK 253
P H +G++ILD H F+
Sbjct: 342 PDHTQGEDILD-AVHGFQ 358
>gi|332218870|ref|XP_003258580.1| PREDICTED: probable G-protein coupled receptor 125 [Nomascus
leucogenys]
Length = 1320
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 64/126 (50%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N I+ + P AF L+R+DL+ N+I + D F+GL +L L L+ N + L
Sbjct: 109 LDLRNNLISSIDPGAFWGLSSLKRLDLTNNRIGCLNADIFRGLTNLVRLNLSGNLFSSLS 168
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
G F L LR+L +CDC++ W+HRW+K T+C P ++ Q + +
Sbjct: 169 QGTFEYLASLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCVYPKSLQAQPVTGVK 228
Query: 249 EHEFKC 254
+ C
Sbjct: 229 QELLTC 234
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N + L G F L LR+L +CDC++ W+HRW+K T+C P
Sbjct: 159 LSGNLFSSLSQGTFEYLASLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCVYPKS 218
Query: 65 IKGQNILDIPEHEFKCSGPVEKPT 88
++ Q + + + C P+E P+
Sbjct: 219 LQAQPVTGVKQELLTCDPPLELPS 242
>gi|81175382|gb|ABB59030.1| variable lymphocyte receptor B [Eptatretus stoutii]
Length = 259
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 82/171 (47%), Gaps = 13/171 (7%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C KGL VP + ++T LRL N + +P F +L ++ L
Sbjct: 23 ACPSRCSCSGTEVNCYNKGLTSVPTGISTSSTVLRLYGNKLQSIPSGVFDKLTQLTKLWL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
N++ + F L SLT L L+ N L +PDG+F L L+ + + N + C C +
Sbjct: 83 YNNKLQSLPNGVFDKLTSLTHLDLHTNQLKSVPDGIFDRLTSLQHIWLHTNPWDCRCPRI 142
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKI 265
+L RW+++ + +K N P+ KCSGS RS I
Sbjct: 143 EYLSRWIQKNSAI-----------VKYGNYNTDPDSA-KCSGSGKPVRSII 181
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C KGL VP + ++T L R+ L S S F + T
Sbjct: 23 ACPSRCSCSGTEVNCYNKGLTSVPTGISTSSTVL-------RLYGNKLQSIPSGVFDKLT 75
Query: 354 NRSRR-LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ L N + LP F L + L N + +P F L+ +
Sbjct: 76 QLTKLWLYNNKLQSLPNGVFDKLTSLTHLDLHTNQLKSVPDGIFDRLTSLQHI 128
>gi|350581142|ref|XP_003480968.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein
2-like [Sus scrofa]
Length = 516
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 76/161 (47%), Gaps = 12/161 (7%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP CRC + C +G + VP + + L L N ITEL FA++ +L
Sbjct: 29 ALGMACPPKCRCEKLLFYCDSQGFHSVPNTTDKGSLGLSLRHNHITELERDQFASFSQLT 88
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICD 211
+ L NQIS V DAFQGL L L L++N + YLP+ F +L L L +S N
Sbjct: 89 WLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLHNLDLSFN----- 143
Query: 212 CHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
LS LH P L + H++ ++ IP F
Sbjct: 144 -QLSSLH------PELFYGLRKLQTLHLRSNSLRTIPVRLF 177
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 105/258 (40%), Gaps = 24/258 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N + YLP+ F +L L L +S N LS LH P L + H
Sbjct: 116 LSSNKIFYLPNTTFTQLINLHNLDLSFN------QLSSLH------PELFYGLRKLQTLH 163
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL--------N 116
++ ++ IP F +E S G++ RE L N
Sbjct: 164 LRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLAR--NGFAGLIKLRELHLEHNQLTKIN 221
Query: 117 KVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
L + L L+ N I+ L + L ++DL+ N+I + F+ + +L
Sbjct: 222 FAHFLRLSSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGNEIKAIDSTVFETMPNLKI 281
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFA 235
L ++NN L L +F L L T+ +S N + C + L WL + R C +
Sbjct: 282 LLMDNNKLNSLDAKLFNSLTSLTTVGLSGNLWECSPRICALASWLGSFQGRWEHSILCHS 341
Query: 236 PSHIKGQNILDIPEHEFK 253
P H +G++ILD H F+
Sbjct: 342 PDHTQGEDILD-AVHGFQ 358
>gi|50086921|gb|AAT70341.1| variable lymphocyte receptor [Petromyzon marinus]
Length = 270
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 14/169 (8%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDCR K VP +P L L N IT+L P F + L+ + L
Sbjct: 21 ACPSQCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDHLVNLQGLGL 80
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ++ + F L LT L+L NN L +P G F L L + + N + C C +
Sbjct: 81 QNNQLTSLPNGVFNKLTQLTHLSLYNNQLKSIPRGAFDNLKSLTQIWLYNNPWDCACSDI 140
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L RW+ ++P L L++ +CSG++ R+
Sbjct: 141 LYLSRWISQHPGLVF-------------GYLNLDPDSARCSGTNTPVRA 176
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKV--LLYSYISNNFKR 351
+CP C C+ VDCR K VP +P ++ Y+ +++ K+ ++ ++ N
Sbjct: 21 ACPSQCSCSGTTVDCRSKRHASVPAGIP-TNAQILYLHD-NQITKLEPGVFDHLVN---- 74
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L+ N +T LP F +L + L N + +P AF N K L ++
Sbjct: 75 --LQGLGLQNNQLTSLPNGVFNKLTQLTHLSLYNNQLKSIPRGAFDNLKSLTQI 126
>gi|332868085|ref|XP_003318767.1| PREDICTED: leucine-rich repeat-containing protein 17 isoform 2 [Pan
troglodytes]
gi|397466187|ref|XP_003804849.1| PREDICTED: leucine-rich repeat-containing protein 17 isoform 2 [Pan
paniscus]
gi|426357392|ref|XP_004046026.1| PREDICTED: leucine-rich repeat-containing protein 17 isoform 2
[Gorilla gorilla gorilla]
Length = 313
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 118/291 (40%), Gaps = 45/291 (15%)
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
+DC+E+ L V P+ + L +N I L F+ +K+L+ +DL +N+ISK+ +A
Sbjct: 65 LDCQERKLVYVLPGWPQDLLHMLLARNKIRILKNNMFSKFKKLKSLDLQQNEISKIESEA 124
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYP 225
F GL LT+L L +N + L + VF L LR+ +N + C C + L L+ R
Sbjct: 125 FFGLNKLTTLLLQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCEIETLISMLQIPRNR 184
Query: 226 RLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKP 285
LG Y KC +P K + + I + C+ EE P P
Sbjct: 185 NLGNYAKCESPQEQKNKKLRQIKSEQL-CN------------EEEKEQLDPKPQVSGRPP 231
Query: 286 TGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYI 345
+ + + H +DC+ K L KVP +P +L
Sbjct: 232 VIKPEVDSTFCHNYVFPIQTLDCKRKELKKVPNNIPPDIVKLD----------------- 274
Query: 346 SNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L N I +L PK F + L+++ L N I + P +
Sbjct: 275 -------------LSYNKINQLRPKEFEDVHELKKLNLSSNGIEFIDPGSL 312
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 75/169 (44%), Gaps = 13/169 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +N + L + VF L LR+ +N + C C + L L+ R LG Y KC +P
Sbjct: 136 LQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCEIETLISMLQIPRNRNLGNYAKCESP 195
Query: 63 SHIKGQNILDIPEHEFKCSGPVEK--PTGECAAEPSCPHP----CRCADGI-----VDCR 111
K + + I + E+ P + + P P C + + +DC+
Sbjct: 196 QEQKNKKLRQIKSEQLCNEEEKEQLDPKPQVSGRPPVIKPEVDSTFCHNYVFPIQTLDCK 255
Query: 112 EKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQI 160
K L KVP +P +L L N I +L PK F + L++++LS N I
Sbjct: 256 RKELKKVPNNIPPDIVKLDLSYNKINQLRPKEFEDVHELKKLNLSSNGI 304
>gi|19388017|gb|AAH25836.1| Cpn2 protein, partial [Mus musculus]
Length = 562
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 109/258 (42%), Gaps = 20/258 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFI-CDCHL-----SWLHRWLKRYPRLGLYTK 58
L+NN L LP+G L L+ L + N+ HL S WL+ L
Sbjct: 215 LSNNMLARLPEGALGSLSSLQELFLDGNAITELSPHLFSQLFSLEMLWLQHNAICHLPVS 274
Query: 59 CFAPSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKV 118
F+ H L + ++ + P G A H + + E +
Sbjct: 275 LFSSLH--NLTFLSLKDNALRT-----LPEGLFAHNQGLLHLSLSYNQLETIPEGAFTNL 327
Query: 119 PILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLT 178
L+ L L N IT+LP F N ++L ++ L N ++ + F L L L
Sbjct: 328 SRLV-----SLTLSHNAITDLPEHVFRNLEQLVKLSLDSNNLTALHPALFHNLSRLQLLN 382
Query: 179 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL--GLYTKCFAP 236
L+ N LT LP G+F + L L + N + CDCHLS+L WL+ Y +T C P
Sbjct: 383 LSRNQLTTLPGGIFDTNYDLFNLALLGNPWQCDCHLSYLTSWLRLYNNQISNTHTFCAGP 442
Query: 237 SHIKGQNILDIPEHEFKC 254
+++KGQ + ++ + + C
Sbjct: 443 AYLKGQLVPNLKQEQLIC 460
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 112/280 (40%), Gaps = 40/280 (14%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L L+ + + LP F + L + L NQ+ + FQ L+ L +L L N LT L
Sbjct: 140 KLTLDFDRLAGLPEDLFCHMDILESLQLQGNQLRTLPGRLFQSLRDLRTLNLAQNLLTQL 199
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT-KCFAPSHIKGQNILD 246
P G F L L+ L++S N L R P L + + G I +
Sbjct: 200 PKGAFQSLTGLQMLKLSNN-------------MLARLPEGALGSLSSLQELFLDGNAITE 246
Query: 247 IPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIV 306
+ H F S+E + C ++S + T +
Sbjct: 247 LSPHLFS-QLFSLEMLWLQHNAICHLPVSLFSS--LHNLT------------------FL 285
Query: 307 DCREKGLNKVPILLPEATTELTYM-VSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
++ L +P L L ++ +S ++++ + ++ N R S L N IT
Sbjct: 286 SLKDNALRTLPEGLFAHNQGLLHLSLSYNQLETIPEGAF--TNLSRLV--SLTLSHNAIT 341
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+LP F N ++L ++ L+ N++T L P F N RL+ +
Sbjct: 342 DLPEHVFRNLEQLVKLSLDSNNLTALHPALFHNLSRLQLL 381
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/351 (19%), Positives = 125/351 (35%), Gaps = 72/351 (20%)
Query: 97 CPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDIT------------------- 137
CP C C V C ++ L +P +P T++ + T
Sbjct: 37 CPVGCDCFGREVFCSDEQLADIPPDIPPHITDIVFVETAFTTVRTRAFSGSPNLTKVVFL 96
Query: 138 -----ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
L P AF RL+ ++++ + +S ++ F L SL LTL+ + L LP+ +F
Sbjct: 97 NTQVRHLEPDAFGGLPRLQDLEITGSPVSNLSAHIFSNLSSLEKLTLDFDRLAGLPEDLF 156
Query: 193 AELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFAPSHIKGQNILDIPEHE 251
+ L +L++ N L+ P RL + ++ + +P+
Sbjct: 157 CHMDILESLQLQGNQ-------------LRTLPGRLFQSLRDLRTLNLAQNLLTQLPKGA 203
Query: 252 FKC-SGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVD--- 307
F+ +G M S N+ P G + S + I +
Sbjct: 204 FQSLTGLQMLKLS--------------NNMLARLPEGALGSLSSLQELFLDGNAITELSP 249
Query: 308 -------------CREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN 354
+ + +P+ L + LT++ D + L ++N
Sbjct: 250 HLFSQLFSLEMLWLQHNAICHLPVSLFSSLHNLTFLSLKDNALRTLPEGLFAHNQGL--- 306
Query: 355 RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P AF N RL + L N IT+LP F N ++L ++
Sbjct: 307 LHLSLSYNQLETIPEGAFTNLSRLVSLTLSHNAITDLPEHVFRNLEQLVKL 357
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 18/144 (12%)
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
I G + ++ H F +EK T + P C I++
Sbjct: 119 ITGSPVSNLSAHIFSNLSSLEKLTLDFDRLAGLPEDLFCHMDILE--------------- 163
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL 184
L+L+ N + LP + F + + LR ++L++N ++++ AFQ L L L L+NN L
Sbjct: 164 ---SLQLQGNQLRTLPGRLFQSLRDLRTLNLAQNLLTQLPKGAFQSLTGLQMLKLSNNML 220
Query: 185 TYLPDGVFAELFRLRTLRISENSF 208
LP+G L L+ L + N+
Sbjct: 221 ARLPEGALGSLSSLQELFLDGNAI 244
>gi|149705846|ref|XP_001502654.1| PREDICTED: leucine-rich repeat-containing protein 4 [Equus
caballus]
Length = 652
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 2/131 (1%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL + N E+ P +F L+++ + +Q+S + +AF GL SL L L +NNL+ L
Sbjct: 221 ELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSL 280
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAPSHIKGQNIL 245
P +F L L L + N + CDC + WL WL+ Y +C AP H++G+ ++
Sbjct: 281 PHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAPLHMRGRYLV 340
Query: 246 DIPEHEFKCSG 256
++ + F+CS
Sbjct: 341 EVDQASFQCSA 351
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 96 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRI 153
+CP C C++ V C +GL++VP +P T L L +N+I + F + L +
Sbjct: 44 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVL 103
Query: 154 DLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
L +N I ++ V AF GL SL +L L +N LT +P G F L +LR L + N
Sbjct: 104 QLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNN 156
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAP 62
L +NNL+ LP +F L L L + N + CDC + WL WL+ Y +C AP
Sbjct: 272 LAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAP 331
Query: 63 SHIKGQNILDIPEHEFKCSGP--VEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
H++G+ ++++ + F+CS P ++ P +E R A+ + CR ++ V
Sbjct: 332 LHMRGRYLVEVDQASFQCSAPFIMDAPRDLNISE------GRMAE--LKCRTPPMSSVKW 383
Query: 121 LLPEATT 127
LLP T
Sbjct: 384 LLPNGTV 390
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 294 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
+CP C C++ V C +GL++VP +P T L M + ++ + + ++ +
Sbjct: 44 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHH---- 99
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+L +N I ++ AF L + L N +T +P AF +LR +
Sbjct: 100 --LEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLREL 151
>gi|27370635|gb|AAH35645.1| Similar to RIKEN cDNA 3830613O22 gene, partial [Homo sapiens]
Length = 1266
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 64/126 (50%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N I+ + P AF L+R+DL+ N+I + D F+GL +L L L+ N + L
Sbjct: 110 LDLRNNLISSIDPGAFWGLSSLKRLDLTNNRIGCLNADIFRGLTNLVRLNLSGNLFSSLS 169
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
G F L LR+L +CDC++ W+HRW+K T+C P ++ Q + +
Sbjct: 170 QGTFDYLASLRSLEFQTEYLLCDCNILWMHRWVKEKNITVRDTRCVYPKSLQAQPVTGVK 229
Query: 249 EHEFKC 254
+ C
Sbjct: 230 QELLTC 235
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N + L G F L LR+L +CDC++ W+HRW+K T+C P
Sbjct: 160 LSGNLFSSLSQGTFDYLASLRSLEFQTEYLLCDCNILWMHRWVKEKNITVRDTRCVYPKS 219
Query: 65 IKGQNILDIPEHEFKCSGPVEKPT 88
++ Q + + + C P+E P+
Sbjct: 220 LQAQPVTGVKQELLTCDPPLELPS 243
>gi|410948271|ref|XP_003980864.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 2
[Felis catus]
Length = 516
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 76/161 (47%), Gaps = 12/161 (7%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP CRC + C +G VP + + L L N ITEL FA++ +L
Sbjct: 29 ALGMACPPKCRCEKLLFYCDSQGFRSVPNATDKGSLGLSLRHNHITELERDQFASFSQLT 88
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICD 211
+ L NQIS V DAFQGL L L L++N + YLP+ F +L L+ L +S N
Sbjct: 89 WLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFN----- 143
Query: 212 CHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
LS LH P L + H++ ++ IP F
Sbjct: 144 -QLSSLH------PELFYGLRKLQTLHLRSNSLRTIPVRLF 177
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 105/258 (40%), Gaps = 24/258 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N + YLP+ F +L L+ L +S N LS LH P L + H
Sbjct: 116 LSSNKIFYLPNTTFTQLINLQNLDLSFN------QLSSLH------PELFYGLRKLQTLH 163
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL--------N 116
++ ++ IP F +E S G++ RE L N
Sbjct: 164 LRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLAR--NGFAGLIKLRELHLEHNQLTKIN 221
Query: 117 KVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
L + L L+ N I+ L + L ++DL+ N+I + + F + +L
Sbjct: 222 FAHFLRLSSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFDTMPNLKI 281
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFA 235
L ++NN L L + L L T+ +S N + C + L WL + R C +
Sbjct: 282 LLMDNNKLNSLDSKILNSLRSLTTVGLSGNLWECSPRICALASWLGSFQGRWEHSILCHS 341
Query: 236 PSHIKGQNILDIPEHEFK 253
P H +G++ILD H F+
Sbjct: 342 PDHTQGEDILD-AVHGFQ 358
>gi|81175435|gb|ABB59055.1| variable lymphocyte receptor B [Eptatretus stoutii]
Length = 306
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 72/136 (52%), Gaps = 2/136 (1%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C KGL VP + ++T LRL++N++ +P F +L R+DL
Sbjct: 23 ACPSRCSCSGTTVNCYNKGLTSVPTGISTSSTVLRLDENELQSIPSGVFDKLTQLTRLDL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLS 215
+NQ+ + F L LT L L N L +P GVF +L +L+ L + +N + +
Sbjct: 83 DQNQLQSIPSGVFDKLTQLTKLYLLKNQLHSIPSGVFDKLTQLKELYLYQNQL--ESLPN 140
Query: 216 WLHRWLKRYPRLGLYT 231
+ L + RL LYT
Sbjct: 141 GVFDKLTQLTRLDLYT 156
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C KGL VP + ++T L R+D+ L S S F + T
Sbjct: 23 ACPSRCSCSGTTVNCYNKGLTSVPTGISTSSTVL-------RLDENELQSIPSGVFDKLT 75
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+R L+QN + +P F +L ++ L +N + +P F +L+ +
Sbjct: 76 QLTRLDLDQNQLQSIPSGVFDKLTQLTKLYLLKNQLHSIPSGVFDKLTQLKEL 128
>gi|73951933|ref|XP_545977.2| PREDICTED: probable G-protein coupled receptor 125 [Canis lupus
familiaris]
Length = 1318
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 64/126 (50%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N I+ + P AF L+R+DL+ N+I + D F+GL +L L L+ N + L
Sbjct: 112 LDLRNNLISSIDPGAFWGLSSLKRLDLTNNRIGCLNADIFRGLTNLVRLNLSGNLFSSLS 171
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
G F L LR+L +CDC++ W+HRW+K T+C P ++ Q + +
Sbjct: 172 QGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCVYPKSLQAQPVTGVK 231
Query: 249 EHEFKC 254
+ C
Sbjct: 232 QELLTC 237
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N + L G F L LR+L +CDC++ W+HRW+K T+C P
Sbjct: 162 LSGNLFSSLSQGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCVYPKS 221
Query: 65 IKGQNILDIPEHEFKCSGPVEKPT 88
++ Q + + + C P+E P+
Sbjct: 222 LQAQPVTGVKQELLTCDPPLELPS 245
>gi|70955664|gb|AAZ16393.1| variable lymphocyte receptor B [Eptatretus stoutii]
Length = 258
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 12/170 (7%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C+ + L VP P +TT L L +N + +P F +L++++L
Sbjct: 23 ACPSRCSCSGTTVQCQSRSLTSVPSAFPSSTTVLDLSRNKLQSIPSGVFDKLTKLKQLEL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLS 215
N++ + F L SLT L L+ N L +PDG+F L L+ + + N + C C
Sbjct: 83 YNNKLQSLPHGVFDKLTSLTHLGLSTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC--- 139
Query: 216 WLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKI 265
PR+ ++ + K + KCSGS RS I
Sbjct: 140 ---------PRIDYLSRFIQKNSNKVYKGYSVDPDSAKCSGSGKPVRSII 180
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 45/113 (39%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V C+ + L VP P +TT L + + L S S F + T
Sbjct: 23 ACPSRCSCSGTTVQCQSRSLTSVPSAFPSSTTVLD-------LSRNKLQSIPSGVFDKLT 75
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L N + LP F L + L N + +P F L+++
Sbjct: 76 KLKQLELYNNKLQSLPHGVFDKLTSLTHLGLSTNQLKSVPDGIFDRLTSLQKI 128
>gi|114593331|ref|XP_001164297.1| PREDICTED: probable G-protein coupled receptor 125 isoform 7 [Pan
troglodytes]
Length = 1320
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 64/126 (50%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N I+ + P AF L+R+DL+ N+I + D F+GL +L L L+ N + L
Sbjct: 109 LDLRNNLISSIDPGAFWGLSSLKRLDLTNNRIGCLNADIFRGLTNLVRLNLSGNLFSSLS 168
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
G F L LR+L +CDC++ W+HRW+K T+C P ++ Q + +
Sbjct: 169 QGTFDYLASLRSLEFQTEYLLCDCNILWMHRWVKEKNITVRDTRCVYPKSLQAQPVTGVK 228
Query: 249 EHEFKC 254
+ C
Sbjct: 229 QELLTC 234
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N + L G F L LR+L +CDC++ W+HRW+K T+C P
Sbjct: 159 LSGNLFSSLSQGTFDYLASLRSLEFQTEYLLCDCNILWMHRWVKEKNITVRDTRCVYPKS 218
Query: 65 IKGQNILDIPEHEFKCSGPVEKPT 88
++ Q + + + C P+E P+
Sbjct: 219 LQAQPVTGVKQELLTCDPPLELPS 242
>gi|147904569|ref|NP_082180.2| carboxypeptidase N subunit 2 precursor [Mus musculus]
gi|52782751|sp|Q9DBB9.2|CPN2_MOUSE RecName: Full=Carboxypeptidase N subunit 2; AltName:
Full=Carboxypeptidase N 83 kDa chain; AltName:
Full=Carboxypeptidase N large subunit; AltName:
Full=Carboxypeptidase N polypeptide 2; AltName:
Full=Carboxypeptidase N regulatory subunit; Flags:
Precursor
gi|187952859|gb|AAI38288.1| Carboxypeptidase N, polypeptide 2 [Mus musculus]
gi|187957074|gb|AAI38289.1| Carboxypeptidase N, polypeptide 2 [Mus musculus]
Length = 547
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 109/258 (42%), Gaps = 20/258 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFI-CDCHL-----SWLHRWLKRYPRLGLYTK 58
L+NN L LP+G L L+ L + N+ HL S WL+ L
Sbjct: 200 LSNNMLARLPEGALGSLSSLQELFLDGNAITELSPHLFSQLFSLEMLWLQHNAICHLPVS 259
Query: 59 CFAPSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKV 118
F+ H L + ++ + P G A H + + E +
Sbjct: 260 LFSSLH--NLTFLSLKDNALRT-----LPEGLFAHNQGLLHLSLSYNQLETIPEGAFTNL 312
Query: 119 PILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLT 178
L+ L L N IT+LP F N ++L ++ L N ++ + F L L L
Sbjct: 313 SRLV-----SLTLSHNAITDLPEHVFRNLEQLVKLSLDSNNLTALHPALFHNLSRLQLLN 367
Query: 179 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL--GLYTKCFAP 236
L+ N LT LP G+F + L L + N + CDCHLS+L WL+ Y +T C P
Sbjct: 368 LSRNQLTTLPGGIFDTNYDLFNLALLGNPWQCDCHLSYLTSWLRLYNNQISNTHTFCAGP 427
Query: 237 SHIKGQNILDIPEHEFKC 254
+++KGQ + ++ + + C
Sbjct: 428 AYLKGQLVPNLKQEQLIC 445
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 134/340 (39%), Gaps = 63/340 (18%)
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
I G + ++ H F +EK T + P C I++
Sbjct: 104 ITGSPVSNLSAHIFSNLSSLEKLTLDFDRLAGLPEDLFCHMDILE--------------- 148
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL 184
L+L+ N + LP + F + + LR ++L++N ++++ AFQ L L L L+NN L
Sbjct: 149 ---SLQLQGNQLRTLPGRLFQSLRDLRTLNLAQNLLTQLPKGAFQSLTGLQMLKLSNNML 205
Query: 185 TYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN- 243
LP+G L L+ L + N+ + P L+++ F+ + Q+
Sbjct: 206 ARLPEGALGSLSSLQELFLDGNAIT------------ELSPH--LFSQLFSLEMLWLQHN 251
Query: 244 -ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCA 302
I +P F SS+ + + ++ + P G A H
Sbjct: 252 AICHLPVSLF----SSLHNLTFLSLKDNALR---------TLPEGLFAHNQGLLH----- 293
Query: 303 DGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL--LYSYISNNFKRWTNRSRRLE 360
+ L +P A T L+ +VS+ + L ++ N ++ S L+
Sbjct: 294 ---LSLSYNQLETIP---EGAFTNLSRLVSLTLSHNAITDLPEHVFRNLEQLVKLS--LD 345
Query: 361 QNDITELPPKAFANYKRLRRIRLEQNDITELPPKAF-ANY 399
N++T L P F N RL+ + L +N +T LP F NY
Sbjct: 346 SNNLTALHPALFHNLSRLQLLNLSRNQLTTLPGGIFDTNY 385
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 112/280 (40%), Gaps = 40/280 (14%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L L+ + + LP F + L + L NQ+ + FQ L+ L +L L N LT L
Sbjct: 125 KLTLDFDRLAGLPEDLFCHMDILESLQLQGNQLRTLPGRLFQSLRDLRTLNLAQNLLTQL 184
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT-KCFAPSHIKGQNILD 246
P G F L L+ L++S N L R P L + + G I +
Sbjct: 185 PKGAFQSLTGLQMLKLSNN-------------MLARLPEGALGSLSSLQELFLDGNAITE 231
Query: 247 IPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIV 306
+ H F S+E + C ++S + T +
Sbjct: 232 LSPHLFS-QLFSLEMLWLQHNAICHLPVSLFSS--LHNLT------------------FL 270
Query: 307 DCREKGLNKVPILLPEATTELTYM-VSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDIT 365
++ L +P L L ++ +S ++++ + ++ N R S L N IT
Sbjct: 271 SLKDNALRTLPEGLFAHNQGLLHLSLSYNQLETIPEGAF--TNLSRLV--SLTLSHNAIT 326
Query: 366 ELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+LP F N ++L ++ L+ N++T L P F N RL+ +
Sbjct: 327 DLPEHVFRNLEQLVKLSLDSNNLTALHPALFHNLSRLQLL 366
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/351 (19%), Positives = 125/351 (35%), Gaps = 72/351 (20%)
Query: 97 CPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDIT------------------- 137
CP C C V C ++ L +P +P T++ + T
Sbjct: 22 CPVGCDCFGREVFCSDEQLADIPPDIPPHITDIVFVETAFTTVRTRAFSGSPNLTKVVFL 81
Query: 138 -----ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
L P AF RL+ ++++ + +S ++ F L SL LTL+ + L LP+ +F
Sbjct: 82 NTQVRHLEPDAFGGLPRLQDLEITGSPVSNLSAHIFSNLSSLEKLTLDFDRLAGLPEDLF 141
Query: 193 AELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFAPSHIKGQNILDIPEHE 251
+ L +L++ N L+ P RL + ++ + +P+
Sbjct: 142 CHMDILESLQLQGNQ-------------LRTLPGRLFQSLRDLRTLNLAQNLLTQLPKGA 188
Query: 252 FKC-SGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVD--- 307
F+ +G M S N+ P G + S + I +
Sbjct: 189 FQSLTGLQMLKLS--------------NNMLARLPEGALGSLSSLQELFLDGNAITELSP 234
Query: 308 -------------CREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN 354
+ + +P+ L + LT++ D + L ++N
Sbjct: 235 HLFSQLFSLEMLWLQHNAICHLPVSLFSSLHNLTFLSLKDNALRTLPEGLFAHNQGL--- 291
Query: 355 RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + +P AF N RL + L N IT+LP F N ++L ++
Sbjct: 292 LHLSLSYNQLETIPEGAFTNLSRLVSLTLSHNAITDLPEHVFRNLEQLVKL 342
>gi|410952787|ref|XP_003983059.1| PREDICTED: leucine-rich repeat-containing protein 4 [Felis catus]
Length = 650
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 2/131 (1%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL + N E+ P +F L+++ + +Q+S + +AF GL SL L L +NNL+ L
Sbjct: 221 ELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSL 280
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAPSHIKGQNIL 245
P +F L L L + N + CDC + WL WL+ Y +C AP H++G+ ++
Sbjct: 281 PHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAPLHMRGRYLV 340
Query: 246 DIPEHEFKCSG 256
++ + F+CS
Sbjct: 341 EVDQASFQCSA 351
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 96 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRI 153
+CP C C++ V C +GL++VP +P T L L +N+I + F + L +
Sbjct: 44 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVL 103
Query: 154 DLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
L +N I ++ V AF GL SL +L L +N LT +P G F L +LR L + N
Sbjct: 104 QLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNN 156
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAP 62
L +NNL+ LP +F L L L + N + CDC + WL WL+ Y +C AP
Sbjct: 272 LAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAP 331
Query: 63 SHIKGQNILDIPEHEFKCSGP--VEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
H++G+ ++++ + F+CS P ++ P +E R A+ + CR ++ V
Sbjct: 332 LHMRGRYLVEVDQASFQCSAPFIMDAPRDLNISE------GRMAE--LKCRTPPMSSVKW 383
Query: 121 LLPEATT 127
LLP T
Sbjct: 384 LLPNGTV 390
Score = 38.1 bits (87), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 294 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
+CP C C++ V C +GL++VP +P T L M + ++ + + ++ +
Sbjct: 44 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHH---- 99
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+L +N I ++ AF L + L N +T +P AF +LR +
Sbjct: 100 --LEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLREL 151
>gi|284010848|dbj|BAI66899.1| variable lymphocyte receptor B [Eptatretus burgeri]
Length = 207
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 14/171 (8%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ + C KGL VP +P +TT L L N + LP + F +L+ + L
Sbjct: 23 ACPSRCSCSGTEIRCISKGLTSVPSGIPASTTVLWLSSNKLQSLPDRVFDKLTQLKELYL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
+N++ + F L SLT L L+ N L +PDG+F L L+ + + N + C C +
Sbjct: 83 HQNKLQSLPDGVFDKLTSLTHLALHTNQLKSVPDGIFDRLTSLQRIYLYSNPWDCTCPGI 142
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKI 265
+ W+ + + I+ Q D KCSGS RS I
Sbjct: 143 HYFSEWINKNSGI-----------IRVQGSFD--ADSAKCSGSGKPVRSII 180
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 48/113 (42%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ + C KGL VP +P +TT L +S ++ L S F + T
Sbjct: 23 ACPSRCSCSGTEIRCISKGLTSVPSGIPASTTVL--WLSSNK-----LQSLPDRVFDKLT 75
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L QN + LP F L + L N + +P F L+R+
Sbjct: 76 QLKELYLHQNKLQSLPDGVFDKLTSLTHLALHTNQLKSVPDGIFDRLTSLQRI 128
>gi|73975658|ref|XP_849461.1| PREDICTED: leucine-rich repeat-containing protein 4 [Canis lupus
familiaris]
gi|281348804|gb|EFB24388.1| hypothetical protein PANDA_001271 [Ailuropoda melanoleuca]
Length = 650
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 2/131 (1%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL + N E+ P +F L+++ + +Q+S + +AF GL SL L L +NNL+ L
Sbjct: 221 ELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSL 280
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAPSHIKGQNIL 245
P +F L L L + N + CDC + WL WL+ Y +C AP H++G+ ++
Sbjct: 281 PHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAPLHMRGRYLV 340
Query: 246 DIPEHEFKCSG 256
++ + F+CS
Sbjct: 341 EVDQASFQCSA 351
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 96 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRI 153
+CP C C++ V C +GL++VP +P T L L +N+I + F + L +
Sbjct: 44 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVL 103
Query: 154 DLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
L +N I ++ V AF GL SL +L L +N LT +P G F L +LR L + N
Sbjct: 104 QLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNN 156
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAP 62
L +NNL+ LP +F L L L + N + CDC + WL WL+ Y +C AP
Sbjct: 272 LAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAP 331
Query: 63 SHIKGQNILDIPEHEFKCSGP--VEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
H++G+ ++++ + F+CS P ++ P +E R A+ + CR ++ V
Sbjct: 332 LHMRGRYLVEVDQASFQCSAPFIMDAPRDLNISE------GRMAE--LKCRTPPMSSVKW 383
Query: 121 LLPEATT 127
LLP T
Sbjct: 384 LLPNGTV 390
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 294 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
+CP C C++ V C +GL++VP +P T L M + ++ + + ++ +
Sbjct: 44 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHH---- 99
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+L +N I ++ AF L + L N +T +P AF +LR +
Sbjct: 100 --LEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLREL 151
>gi|402869055|ref|XP_003898589.1| PREDICTED: probable G-protein coupled receptor 125 [Papio anubis]
Length = 1319
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 64/126 (50%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N I+ + P AF L+R+DL+ N+I + D F+GL +L L L+ N + L
Sbjct: 108 LDLRNNLISSIDPGAFWGLSSLKRLDLTNNRIGCLNADIFRGLTNLVRLNLSGNLFSSLS 167
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
G F L LR+L +CDC++ W+HRW+K T+C P ++ Q + +
Sbjct: 168 QGTFDYLASLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCVYPKSLQAQPVTGVK 227
Query: 249 EHEFKC 254
+ C
Sbjct: 228 QELLTC 233
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N + L G F L LR+L +CDC++ W+HRW+K T+C P
Sbjct: 158 LSGNLFSSLSQGTFDYLASLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCVYPKS 217
Query: 65 IKGQNILDIPEHEFKCSGPVEKPT 88
++ Q + + + C P+E P+
Sbjct: 218 LQAQPVTGVKQELLTCDPPLELPS 241
>gi|380259005|pdb|3TWI|D Chain D, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
gi|380259006|pdb|3TWI|E Chain E, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
gi|380259007|pdb|3TWI|F Chain F, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
Length = 179
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C+E+ L VP +P T L L N IT+L P F + +L ++L
Sbjct: 12 ACPSQCSCSGTTVNCQERSLASVPAGIPTTTQVLHLYINQITKLEPGVFDSLTQLTYLNL 71
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
+ NQ++ + V F L LT L L+ N L +P GVF L L + + N + C+C +
Sbjct: 72 AVNQLTALPVGVFDKLTKLTHLALHINQLKSIPMGVFDNLKSLTHIYLFNNPWDCECSDI 131
Query: 215 SWLHRWLKRYPRL 227
+L W+ ++ +
Sbjct: 132 LYLKNWIVQHASI 144
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTEL-TYMVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ V+C+E+ L VP +P T L Y+ I +++ + S +
Sbjct: 12 ACPSQCSCSGTTVNCQERSLASVPAGIPTTTQVLHLYINQITKLEPGVFDSLTQLTY--- 68
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N +T LP F +L + L N + +P F N K L +
Sbjct: 69 ----LNLAVNQLTALPVGVFDKLTKLTHLALHINQLKSIPMGVFDNLKSLTHI 117
>gi|70955591|gb|AAZ16357.1| variable lymphocyte receptor B [Eptatretus burgeri]
Length = 256
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 77/171 (45%), Gaps = 14/171 (8%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ + C KGL VP + +TT L+L N + LP F +L + L
Sbjct: 23 ACPSRCSCSGTEIRCISKGLTAVPTGISASTTNLQLYSNKLQSLPHGVFDKLTQLTYLSL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
S NQ+ + F L L L L+ N L +PDG+F L L+ + + N + C C +
Sbjct: 83 STNQLQSLPDGVFDKLIKLKHLELSTNQLKSVPDGIFDRLTSLQYIYLYSNPWDCTCPGI 142
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKI 265
+L +W+ ++ + +Y P KCSGS RS I
Sbjct: 143 RYLSQWINKHSGIIIYYGLVNPD-------------SAKCSGSGKPVRSII 180
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ + C KGL VP + +TT L ++ L S F + T
Sbjct: 23 ACPSRCSCSGTEIRCISKGLTAVPTGISASTTNL-------QLYSNKLQSLPHGVFDKLT 75
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L N + LP F +L+ + L N + +P F L+ +
Sbjct: 76 QLTYLSLSTNQLQSLPDGVFDKLIKLKHLELSTNQLKSVPDGIFDRLTSLQYI 128
>gi|297673243|ref|XP_002814682.1| PREDICTED: probable G-protein coupled receptor 125 [Pongo abelii]
Length = 1321
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 64/126 (50%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N I+ + P AF L+R+DL+ N+I + D F+GL +L L L+ N + L
Sbjct: 110 LDLRNNLISSIDPGAFWGLSSLKRLDLTNNRIGCLNADIFRGLTNLVRLNLSGNLFSSLS 169
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
G F L LR+L +CDC++ W+HRW+K T+C P ++ Q + +
Sbjct: 170 QGTFDYLASLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCVYPKSLQAQPVTGVK 229
Query: 249 EHEFKC 254
+ C
Sbjct: 230 QELLTC 235
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N + L G F L LR+L +CDC++ W+HRW+K T+C P
Sbjct: 160 LSGNLFSSLSQGTFDYLASLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCVYPKS 219
Query: 65 IKGQNILDIPEHEFKCSGPVEKPT 88
++ Q + + + C P+E P+
Sbjct: 220 LQAQPVTGVKQELLTCDPPLELPS 243
>gi|119928551|dbj|BAF43101.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 169
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 13/169 (7%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDCR K VP +P T L L N IT+L P F + L+++ L
Sbjct: 11 ACPAQCSCSGTTVDCRNKRHASVPAGIPTTTRVLYLNDNQITKLEPGVFDRLRNLQQLHL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
+NQ+S + F L L+ L L+ N L +P G F L L + + N + C C +
Sbjct: 71 YQNQLSALPTGVFDKLTQLSILNLHTNQLKSIPRGAFDNLKSLTHIWLFNNPWDCACSDI 130
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L RW+ ++P + N + + +CSG++ R+
Sbjct: 131 LYLSRWISQHP------------GVVRNNYDGVDPDQARCSGTNTPVRA 167
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ VDCR K VP +P TT + Y+ + +++ K+ F R
Sbjct: 11 ACPAQCSCSGTTVDCRNKRHASVPAGIP-TTTRVLYL-NDNQITKLE-----PGVFDRLR 63
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N + L QN ++ LP F +L + L N + +P AF N K L +
Sbjct: 64 NLQQLHLYQNQLSALPTGVFDKLTQLSILNLHTNQLKSIPRGAFDNLKSLTHI 116
>gi|119613207|gb|EAW92801.1| G protein-coupled receptor 125 [Homo sapiens]
Length = 1266
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 64/126 (50%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N I+ + P AF L+R+DL+ N+I + D F+GL +L L L+ N + L
Sbjct: 55 LDLRNNLISSIDPGAFWGLSSLKRLDLTNNRIGCLNADIFRGLTNLVRLNLSGNLFSSLS 114
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
G F L LR+L +CDC++ W+HRW+K T+C P ++ Q + +
Sbjct: 115 QGTFDYLASLRSLEFQTEYLLCDCNILWMHRWVKEKNITVRDTRCVYPKSLQAQPVTGVK 174
Query: 249 EHEFKC 254
+ C
Sbjct: 175 QELLTC 180
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N + L G F L LR+L +CDC++ W+HRW+K T+C P
Sbjct: 105 LSGNLFSSLSQGTFDYLASLRSLEFQTEYLLCDCNILWMHRWVKEKNITVRDTRCVYPKS 164
Query: 65 IKGQNILDIPEHEFKCSGPVEKPT 88
++ Q + + + C P+E P+
Sbjct: 165 LQAQPVTGVKQELLTCDPPLELPS 188
>gi|119926337|dbj|BAF43208.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 193
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 57/113 (50%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C E+ L VP +P T L L N IT+L P F + LR + L
Sbjct: 11 ACPAQCSCSGTTVHCHERSLASVPAGIPTTTQNLNLHVNQITKLEPGVFDSLANLRELHL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+NQ++ ++ F L LT L L N L LP+GVF L L+ L + N
Sbjct: 71 GENQLASLSAGVFDKLTGLTHLALGGNQLQVLPEGVFDRLGNLQQLGLHVNQL 123
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 52/130 (40%), Gaps = 18/130 (13%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVL------------ 340
+CP C C+ V C E+ L VP +P T L V+ I +++ +
Sbjct: 11 ACPAQCSCSGTTVHCHERSLASVPAGIPTTTQNLNLHVNQITKLEPGVFDSLANLRELHL 70
Query: 341 ----LYSYISNNFKRWTNRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKA 395
L S + F + T + L N + LP F L+++ L N + +P A
Sbjct: 71 GENQLASLSAGVFDKLTGLTHLALGGNQLQVLPEGVFDRLGNLQQLGLHVNQLKSIPRGA 130
Query: 396 FANYKRLRRM 405
F N K L +
Sbjct: 131 FDNLKSLTHI 140
>gi|355687195|gb|EHH25779.1| Putative G-protein coupled receptor 125, partial [Macaca mulatta]
Length = 1261
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 64/126 (50%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N I+ + P AF L+R+DL+ N+I + D F+GL +L L L+ N + L
Sbjct: 50 LDLRNNLISSIDPGAFWGLSSLKRLDLTNNRIGCLNADIFRGLTNLVRLNLSGNLFSSLS 109
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
G F L LR+L +CDC++ W+HRW+K T+C P ++ Q + +
Sbjct: 110 QGTFDYLASLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCVYPKSLQAQPVTGVK 169
Query: 249 EHEFKC 254
+ C
Sbjct: 170 QELLTC 175
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N + L G F L LR+L +CDC++ W+HRW+K T+C P
Sbjct: 100 LSGNLFSSLSQGTFDYLASLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCVYPKS 159
Query: 65 IKGQNILDIPEHEFKCSGPVEKPT 88
++ Q + + + C P+E P+
Sbjct: 160 LQAQPVTGVKQELLTCDPPLELPS 183
>gi|350584462|ref|XP_003126632.3| PREDICTED: leucine-rich repeat and transmembrane domain-containing
protein 2 [Sus scrofa]
Length = 370
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 92/217 (42%), Gaps = 55/217 (25%)
Query: 91 CAAE--PSCPHPCRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFAN 146
CAAE P+CP C C VDC GL VP +P AT L L+ N ++ LP AFAN
Sbjct: 31 CAAEALPACPFSCSCDSRSLEVDCSGLGLTVVPPDVPAATRTLLLQNNRLSSLPSWAFAN 90
Query: 147 YKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN----------------------- 183
L+R+DLS N + ++ AF L +LT L L NN+
Sbjct: 91 LSSLQRLDLSNNFLDRLPRAAFGDLANLTELQLRNNSLRALDPELLRHLPRLRHLDLSLN 150
Query: 184 -LTYLPDGVFAELFRLRT------------------------LRISENSFICDCHLSWLH 218
L LP G+F L LR+ L++ +N + CDCHL
Sbjct: 151 GLARLPPGLFDGLPALRSLSLRANRLQSLDRLTFEPLASLQLLQVGDNPWECDCHLRDFK 210
Query: 219 RWLKRYPRLGL---YTKCFAPSHIKGQNILDIPEHEF 252
WL+ + G C P ++G+++ +P F
Sbjct: 211 HWLEWFSYRGGRLDQLACTLPKELRGKDMRVVPMEMF 247
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 60/141 (42%), Gaps = 26/141 (18%)
Query: 289 CAAE--PSCPHPCRCADGI--VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSY 344
CAAE P+CP C C VDC GL VP +P AT T ++ +R+ + +++
Sbjct: 31 CAAEALPACPFSCSCDSRSLEVDCSGLGLTVVPPDVPAATR--TLLLQNNRLSSLPSWAF 88
Query: 345 ----------ISNNFKRWTNRSR----------RLEQNDITELPPKAFANYKRLRRIRLE 384
+SNNF R+ +L N + L P+ + RLR + L
Sbjct: 89 ANLSSLQRLDLSNNFLDRLPRAAFGDLANLTELQLRNNSLRALDPELLRHLPRLRHLDLS 148
Query: 385 QNDITELPPKAFANYKRLRRM 405
N + LPP F LR +
Sbjct: 149 LNGLARLPPGLFDGLPALRSL 169
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGL---YTKCF 60
+L N L L F L L+ L++ +N + CDCHL WL+ + G C
Sbjct: 170 SLRANRLQSLDRLTFEPLASLQLLQVGDNPWECDCHLRDFKHWLEWFSYRGGRLDQLACT 229
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPC 101
P ++G+++ +P F +E E P PC
Sbjct: 230 LPKELRGKDMRVVPMEMFNYCSQLEDENSSAGLEVPGP-PC 269
>gi|426343368|ref|XP_004038281.1| PREDICTED: carboxypeptidase N subunit 2 [Gorilla gorilla gorilla]
Length = 545
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 113/258 (43%), Gaps = 20/258 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFI-----CDCHLSWLHR-WLKRYPRLGLYTK 58
L+NN L+ LP GVF +L L+ L + N+ L L R WL+R L
Sbjct: 200 LSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLS 259
Query: 59 CFAPSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKV 118
FA + L + + + P G A P + + E +
Sbjct: 260 IFA--SLGNLTFLSLQWNMLRV-----LPAGLFAHTPCLVGLSLTHNQLETVAEGAFAHL 312
Query: 119 PILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLT 178
L L L N IT LP F + + L ++ L N ++ + FQ L L L+
Sbjct: 313 SNL-----RSLMLSYNAITHLPAGIFRDLEELVKLYLGSNNLTALHPALFQNLSKLELLS 367
Query: 179 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPR--LGLYTKCFAP 236
L+ N LT LPDG+F + L L + N + CDCHL++L WL++Y L + T C P
Sbjct: 368 LSKNQLTTLPDGIFDTNYNLFNLALHGNPWQCDCHLAYLFNWLQQYTDRLLNIQTYCAGP 427
Query: 237 SHIKGQNILDIPEHEFKC 254
+++KGQ + + E + C
Sbjct: 428 AYLKGQVVPALNEKQLVC 445
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 88/211 (41%), Gaps = 42/211 (19%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAP- 62
TLN N L LP+G+F L L +L + N L+ PR + F P
Sbjct: 127 TLNFNMLEALPEGLFQRLAALESLHLQGNQ-------------LQALPR-----RLFQPL 168
Query: 63 SHIK----GQNIL-DIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 117
+H+K QN+L +PE F ++ A P G +
Sbjct: 169 THLKTLNLAQNLLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKLGSLQ-------- 220
Query: 118 VPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSL 177
EL L+ N+I+ELPP+ F+ L R+ L +N I+ + + F L +LT L
Sbjct: 221 ----------ELFLDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLSIFASLGNLTFL 270
Query: 178 TLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+L N L LP G+FA L L ++ N
Sbjct: 271 SLQWNMLRVLPAGLFAHTPCLVGLSLTHNQL 301
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 130/361 (36%), Gaps = 75/361 (20%)
Query: 93 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRR 152
A+P CP C C V C ++ L +P +P + + T L +AF + L +
Sbjct: 19 AQP-CPVGCDCFVQEVFCSDEELATIPPDIPPYAKNIIFVETSFTTLETRAFGSNPNLTK 77
Query: 153 IDLSKNQISKVAVDAFQGL------------------------KSLTSLTLNNNNLTYLP 188
+ Q+ + DAF GL SL LTLN N L LP
Sbjct: 78 VVFLNTQLCQFRPDAFGGLPRLEDLEVTGSSFLNLSTNIFSNLTSLGKLTLNFNMLEALP 137
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAP-SHIK----GQN 243
+G+F L L +L + N L+ PR + F P +H+K QN
Sbjct: 138 EGLFQRLAALESLHLQGNQ-------------LQALPR-----RLFQPLTHLKTLNLAQN 179
Query: 244 IL-DIPEHEFK--CSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAE--PSCPHP 298
+L +PE F S +++ + F S +E P
Sbjct: 180 LLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQ 239
Query: 299 CRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL------------------ 340
C + + + + +P+ + + LT++ + +VL
Sbjct: 240 LFCLERLW-LQRNAITHLPLSIFASLGNLTFLSLQWNMLRVLPAGLFAHTPCLVGLSLTH 298
Query: 341 --LYSYISNNFKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFA 397
L + F +N RS L N IT LP F + + L ++ L N++T L P F
Sbjct: 299 NQLETVAEGAFAHLSNLRSLMLSYNAITHLPAGIFRDLEELVKLYLGSNNLTALHPALFQ 358
Query: 398 N 398
N
Sbjct: 359 N 359
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 359 LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
L+ N+I+ELPP+ F+ L R+ L++N IT LP FA+ L
Sbjct: 224 LDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLSIFASLGNL 267
>gi|426227967|ref|XP_004008086.1| PREDICTED: leucine-rich repeat-containing protein 4 [Ovis aries]
Length = 652
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 2/131 (1%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL + N E+ P +F L+++ + +Q+S + +AF GL SL L L +NNL+ L
Sbjct: 221 ELEMSGNHFPEIRPGSFHGLGSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSL 280
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAPSHIKGQNIL 245
P +F L L L + N + CDC + WL WL+ Y +C AP H++G+ ++
Sbjct: 281 PHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAPLHMRGRYLV 340
Query: 246 DIPEHEFKCSG 256
++ + F+CS
Sbjct: 341 EVDQASFQCSA 351
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
Query: 96 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRI 153
+CP C C++ V C +G +P P T L L +N+I + F + L +
Sbjct: 44 NCPSVCSCSNQFSKVVCTRRGRGFLPTRRPSNTRYLNLMENNIQMIQADTFRHLHHLEVL 103
Query: 154 DLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
L +N I ++ V AF GL SL +L L +N LT +P G F L +LR L + N
Sbjct: 104 QLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNN 156
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAP 62
L +NNL+ LP +F L L L + N + CDC + WL WL+ Y +C AP
Sbjct: 272 LAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAP 331
Query: 63 SHIKGQNILDIPEHEFKCSGP--VEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
H++G+ ++++ + F+CS P ++ P +E R A+ + CR ++ V
Sbjct: 332 LHMRGRYLVEVDQASFQCSAPFIMDAPRDLNISE------GRMAE--LKCRTPPMSSVKW 383
Query: 121 LLPEATT 127
LLP T
Sbjct: 384 LLPNGTV 390
>gi|417403647|gb|JAA48622.1| Putative extracellular matrix protein slit [Desmodus rotundus]
Length = 652
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 2/131 (1%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL + N E+ P +F L+++ + +Q+S + +AF GL SL L L +NNL+ L
Sbjct: 221 ELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSL 280
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAPSHIKGQNIL 245
P +F L L L + N + CDC + WL WL+ Y +C AP H++G+ ++
Sbjct: 281 PHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAPLHMRGRYLV 340
Query: 246 DIPEHEFKCSG 256
++ + F+CS
Sbjct: 341 EVDQAAFQCSA 351
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 96 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRI 153
+CP C C++ V C +GL++VP +P T L L +N+I + F + L +
Sbjct: 44 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVL 103
Query: 154 DLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
L +N I ++ V AF GL SL +L L +N LT +P G F L +LR L + N
Sbjct: 104 QLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNN 156
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAP 62
L +NNL+ LP +F L L L + N + CDC + WL WL+ Y +C AP
Sbjct: 272 LAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAP 331
Query: 63 SHIKGQNILDIPEHEFKCSGP--VEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
H++G+ ++++ + F+CS P ++ P +E R A+ + CR ++ V
Sbjct: 332 LHMRGRYLVEVDQAAFQCSAPFIMDAPRDLNISE------GRMAE--LKCRTPPMSSVKW 383
Query: 121 LLPEATT 127
LLP T
Sbjct: 384 LLPNGTV 390
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 294 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
+CP C C++ V C +GL++VP +P T L M + ++ + + ++ +
Sbjct: 44 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHH---- 99
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+L +N I ++ AF L + L N +T +P AF +LR +
Sbjct: 100 --LEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLREL 151
>gi|284010858|dbj|BAI66904.1| variable lymphocyte receptor B [Eptatretus burgeri]
Length = 225
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 60/113 (53%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC KGL VP +P + T L L+ N + LP F RL +DL
Sbjct: 23 ACPSRCSCSGTSVDCDSKGLTSVPSGIPSSATRLDLDNNQLQSLPSGVFDKLTRLTYLDL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
N++ + F L LT+L L++N + +LP G+F +L +L L++ N
Sbjct: 83 ESNKLQSIPSGVFDQLTQLTNLELDSNQIKFLPMGIFDKLTKLTELQLYSNQL 135
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 48/113 (42%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ VDC KGL VP +P + T L +D L S S F + T
Sbjct: 23 ACPSRCSCSGTSVDCDSKGLTSVPSGIPSSATRL-------DLDNNQLQSLPSGVFDKLT 75
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ LE N + +P F +L + L+ N I LP F +L +
Sbjct: 76 RLTYLDLESNKLQSIPSGVFDQLTQLTNLELDSNQIKFLPMGIFDKLTKLTEL 128
>gi|59823631|ref|NP_660333.2| probable G-protein coupled receptor 125 precursor [Homo sapiens]
gi|50400542|sp|Q8IWK6.2|GP125_HUMAN RecName: Full=Probable G-protein coupled receptor 125; Flags:
Precursor
Length = 1321
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 64/126 (50%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N I+ + P AF L+R+DL+ N+I + D F+GL +L L L+ N + L
Sbjct: 110 LDLRNNLISSIDPGAFWGLSSLKRLDLTNNRIGCLNADIFRGLTNLVRLNLSGNLFSSLS 169
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
G F L LR+L +CDC++ W+HRW+K T+C P ++ Q + +
Sbjct: 170 QGTFDYLASLRSLEFQTEYLLCDCNILWMHRWVKEKNITVRDTRCVYPKSLQAQPVTGVK 229
Query: 249 EHEFKC 254
+ C
Sbjct: 230 QELLTC 235
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N + L G F L LR+L +CDC++ W+HRW+K T+C P
Sbjct: 160 LSGNLFSSLSQGTFDYLASLRSLEFQTEYLLCDCNILWMHRWVKEKNITVRDTRCVYPKS 219
Query: 65 IKGQNILDIPEHEFKCSGPVEKPT 88
++ Q + + + C P+E P+
Sbjct: 220 LQAQPVTGVKQELLTCDPPLELPS 243
>gi|50086939|gb|AAT70350.1| variable lymphocyte receptor [Petromyzon marinus]
Length = 417
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 113/310 (36%), Gaps = 60/310 (19%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C++K L VP +P T L L N IT+L P F +L R+DL
Sbjct: 21 ACPSQCSCSGTEVHCQKKSLASVPAGIPTTTQVLYLHVNQITKLEPGVFDRLTQLTRLDL 80
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLS 215
NQ++ + F L +L L L N LT LP GVF L +L+ L + N L
Sbjct: 81 YNNQLTVLPAGVFDSLVNLQILVLYQNQLTTLPAGVFDRLVKLKELYLDHNQL--QAILP 138
Query: 216 WLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFH 275
L L RL L + + +P F G M H
Sbjct: 139 ALFHSLTELTRLEL----------EDNQLKSLPARIFDRLGKLMY-------------LH 175
Query: 276 PYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDR 335
+ + P G D +V+ +E L + P
Sbjct: 176 LHEKQLMTVPAG-------------VFDSLVNLKELRLYNNQLAAPPEN----------- 211
Query: 336 VDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKA 395
++ + N K W N N +T LP F N +L + + N + +P A
Sbjct: 212 -----VFDRLVNLQKLWLN------SNQLTSLPTGVFDNLTQLSILNMHTNQLKSIPRGA 260
Query: 396 FANYKRLRRM 405
F N K L +
Sbjct: 261 FDNLKSLTHI 270
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 96/226 (42%), Gaps = 23/226 (10%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L NN LT LP GVF L L+ L + +N L+ L + + RL + K H
Sbjct: 80 LYNNQLTVLPAGVFDSLVNLQILVLYQN------QLTTLPAGV--FDRL-VKLKELYLDH 130
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGI-----VDCREKGLNKVP 119
+ Q IL H +E + + P+ R D + + EK L VP
Sbjct: 131 NQLQAILPALFHSLTELTRLELEDNQLKSLPA-----RIFDRLGKLMYLHLHEKQLMTVP 185
Query: 120 ILLPEATT---ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
+ ++ ELRL N + P F L+++ L+ NQ++ + F L L+
Sbjct: 186 AGVFDSLVNLKELRLYNNQLAAPPENVFDRLVNLQKLWLNSNQLTSLPTGVFDNLTQLSI 245
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-LSWLHRWL 221
L ++ N L +P G F L L + + N + C+C + +L W+
Sbjct: 246 LNMHTNQLKSIPRGAFDNLKSLTHIFLYNNPWDCECRDIMYLRNWV 291
>gi|363742131|ref|XP_003642599.1| PREDICTED: G-protein coupled receptor 124 [Gallus gallus]
Length = 1203
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 1/131 (0%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L L+ N I+ + P AF L+R+DLS N+I ++ FQGL +L L ++ N + L
Sbjct: 26 KLDLKNNLISTVQPGAFLGLPELKRLDLSNNRIGCLSASVFQGLTNLLRLNMSGNIFSSL 85
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFAPSHIKGQNILD 246
P GVF EL L+ + + CDC+L W+ W + Y ++ T C P H+ +
Sbjct: 86 PPGVFDELPSLKVVDFATEYLTCDCNLRWVLPWARNYSVQISERTLCVYPRHLHTTPLRS 145
Query: 247 IPEHEFKCSGS 257
E + +C+G+
Sbjct: 146 AQESQLQCAGT 156
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFAPS 63
++ N + LP GVF EL L+ + + CDC+L W+ W + Y ++ T C P
Sbjct: 77 MSGNIFSSLPPGVFDELPSLKVVDFATEYLTCDCNLRWVLPWARNYSVQISERTLCVYPR 136
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPT 88
H+ + E + +C+G E T
Sbjct: 137 HLHTTPLRSAQESQLQCAGTPELHT 161
>gi|344276510|ref|XP_003410051.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 1 [Loxodonta africana]
Length = 1105
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 113/259 (43%), Gaps = 20/259 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L NN++ L DG F L R+ L + NS + + + L+ L +L L + H
Sbjct: 245 LQRNNISKLTDGAFWGLSRMHVLHLESNSLM-EVNSGSLY-GLTALHQLHLSNNSISRIH 302
Query: 65 IKGQNILDIPEHEFKCS-GPVEKPTGECAAEPSCPHPCRCADG----IVDCREKGLNKVP 119
G + HE S + + E A+ S + R + I + +GL +
Sbjct: 303 RDGWSFCQ-KLHELVLSFNNLTRLDEESLADLSSLNTLRLSHNSISHIAEGAFRGLKNLR 361
Query: 120 ILLPEATTELRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
+L L+ N+I+ E AF L ++ L N+I VA AF GL+ L
Sbjct: 362 VL--------DLDHNEISGTIEDTSGAFTGLDSLSKLTLFGNKIKSVAKRAFSGLEGLEH 413
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFA 235
L + N + + F ++ L+ L IS +SF+CDC L WL WL R + + C
Sbjct: 414 LNIGENAIRSVQFDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLTGRMLQAFVTATCAH 473
Query: 236 PSHIKGQNILDIPEHEFKC 254
P +KGQ+I +P F C
Sbjct: 474 PQSLKGQSIFSVPPESFVC 492
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 133 QNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
+N IT+LP KAF RL ++DL++N+I + FQGL SL L L NN++ L DG F
Sbjct: 200 KNRITQLPVKAF-KLPRLTQLDLNRNRIRLIEGLTFQGLDSLEVLKLQRNNISKLTDGAF 258
Query: 193 AELFRLRTLRISENSFI 209
L R+ L + NS +
Sbjct: 259 WGLSRMHVLHLESNSLM 275
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Query: 106 GIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAV 165
+DC +GL +P LP T L L N ++E+ P F + L+ + L+ N+++ A+
Sbjct: 53 DSLDCGGRGLTTLPGDLPAWTRSLNLSYNKLSEVDPADFEDLPNLQEVYLNNNELT--AI 110
Query: 166 DAFQGLKS-LTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ S + SL L +N + + L L +S N+
Sbjct: 111 PSLGAAASHIVSLFLQHNKIRSVEGSQLKAYLSLEVLDLSSNNI 154
>gi|354500047|ref|XP_003512114.1| PREDICTED: carboxypeptidase N subunit 2-like [Cricetulus griseus]
gi|344256786|gb|EGW12890.1| Carboxypeptidase N subunit 2 [Cricetulus griseus]
Length = 547
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N IT LP F + K+L R+ L+ N ++ + FQ L L L L+ N LT LP
Sbjct: 318 LTLSHNAITYLPKDVFRDLKQLVRLFLNSNNLTALHSALFQNLSRLELLNLSKNQLTMLP 377
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY---TKCFAPSHIKGQNIL 245
G+F + L L + N + CDCHL++L WL+ Y G++ T C P+++KGQ +
Sbjct: 378 GGIFDTNYNLFNLALFGNPWQCDCHLAYLASWLRLYSE-GIFNRDTYCAGPAYLKGQLVP 436
Query: 246 DIPEHEFKC 254
+ + + C
Sbjct: 437 SLKQEQLVC 445
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 142/355 (40%), Gaps = 54/355 (15%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTEL------------RLEQND-------- 135
SCP C C D V C ++ L +P+ +P T++ R N+
Sbjct: 21 SCPMGCDCFDREVFCTDQQLATIPLDIPSHVTDIVFVETTFTTVETRAFSNNSNLTKVVF 80
Query: 136 ----ITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGV 191
+ L P AF RL ++L+ + S ++ D F L SL LTL+ + L LP+ +
Sbjct: 81 LNTLVCHLEPDAFGGLPRLEDLELTGSSFSNLSADIFSNLSSLGKLTLDFDRLVALPEDL 140
Query: 192 FAELFRLRTLRISENS-------------FICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 238
F + L +L++ N ++ +L +L + P+ GL+
Sbjct: 141 FHHMDNLESLQLQGNQLQTLPGRLFQPLRYLRTLNLD--QNFLNKLPK-GLFQSLTNLQI 197
Query: 239 IKGQN--ILDIPEHEFKCSGSSME--TRSKIYREECSTDFHPYNSCPVEKPTGECAAEPS 294
+K N + +PE GS E S E F S +EK + A
Sbjct: 198 LKLSNNMLTSLPEGLLADLGSLQELFLDSNAIEELSPQVFSQLLS--LEKLWLQHNAISR 255
Query: 295 CPHPCRCA---DGIVDCREKGLNKVPILLPEATTELTYM-VSIDRVDKVLLYSYISNNFK 350
P + ++ ++ L +P L T+ L Y+ +S ++++ + ++ N
Sbjct: 256 LPDSVFSSLYNLTFLNLQDNALWTLPADLFTHTSRLLYLSLSYNQLETITEGTFA--NLS 313
Query: 351 RWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R + L N IT LP F + K+L R+ L N++T L F N RL +
Sbjct: 314 RLVFLT--LSHNAITYLPKDVFRDLKQLVRLFLNSNNLTALHSALFQNLSRLELL 366
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY---TKCFA 61
L+ N LT LP G+F + L L + N + CDCHL++L WL+ Y G++ T C
Sbjct: 368 LSKNQLTMLPGGIFDTNYNLFNLALFGNPWQCDCHLAYLASWLRLYSE-GIFNRDTYCAG 426
Query: 62 PSHIKGQNILDIPEHEFKC 80
P+++KGQ + + + + C
Sbjct: 427 PAYLKGQLVPSLKQEQLVC 445
>gi|126340665|ref|XP_001366278.1| PREDICTED: leucine-rich repeat-containing protein 4 [Monodelphis
domestica]
Length = 650
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 2/131 (1%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL + N E+ P +F L+++ + +Q+S + +AF GL SL L L +NNL+ L
Sbjct: 223 ELEMSGNHFPEIRPGSFRGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSL 282
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAPSHIKGQNIL 245
P +F L L L + N + CDC + WL WL+ Y +C AP H++G+ ++
Sbjct: 283 PHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAPLHMRGRYLV 342
Query: 246 DIPEHEFKCSG 256
++ + F+CS
Sbjct: 343 EVDQASFQCSA 353
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 96 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRI 153
+CP C C++ V C +GL++VP +P T L L +N+I + F + L +
Sbjct: 46 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVL 105
Query: 154 DLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
L +N I ++ V AF GL SL +L L +N LT +P G F L +LR L + N
Sbjct: 106 QLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNN 158
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAP 62
L +NNL+ LP +F L L L + N + CDC + WL WL+ Y +C AP
Sbjct: 274 LAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAP 333
Query: 63 SHIKGQNILDIPEHEFKCSGP--VEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
H++G+ ++++ + F+CS P ++ P +E R A+ + CR ++ V
Sbjct: 334 LHMRGRYLVEVDQASFQCSAPFIMDAPRDLNISE------GRIAE--LKCRTPPMSSVRW 385
Query: 121 LLPEATT 127
LLP T
Sbjct: 386 LLPNGTV 392
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 294 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
+CP C C++ V C +GL++VP +P T L M + ++ + + ++ +
Sbjct: 46 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHH---- 101
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+L +N I ++ AF L + L N +T +P AF +LR +
Sbjct: 102 --LEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLREL 153
>gi|78100612|gb|ABB21128.1| variable lymphocyte receptor A [Eptatretus stoutii]
Length = 323
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 101 CRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKN 158
C C D VDC KGL +P +P TT+LRL QN +++L P AF + L ++LS N
Sbjct: 34 CTCNDQTKNVDCSSKGLTAIPSNIPPDTTQLRLHQNSLSKLSPTAFHSLSSLTFLELSYN 93
Query: 159 QISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
Q+ + V F L +L L LN N L LP G+F +L +L LR+S N
Sbjct: 94 QLQTLPVGVFDHLVNLDKLYLNRNQLKSLPSGIFDKLTKLTDLRLSSNKL 143
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 10/110 (9%)
Query: 299 CRCADGI--VDCREKGLNKVPILLPEATTEL-TYMVSIDRVDKVLLYSYISNNFKRWTNR 355
C C D VDC KGL +P +P TT+L + S+ ++ +S S F
Sbjct: 34 CTCNDQTKNVDCSSKGLTAIPSNIPPDTTQLRLHQNSLSKLSPTAFHSLSSLTF------ 87
Query: 356 SRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + LP F + L ++ L +N + LP F +L +
Sbjct: 88 -LELSYNQLQTLPVGVFDHLVNLDKLYLNRNQLKSLPSGIFDKLTKLTDL 136
>gi|70955642|gb|AAZ16382.1| variable lymphocyte receptor B [Eptatretus stoutii]
Length = 261
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 82/171 (47%), Gaps = 11/171 (6%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C+ K L VP +P +TT L L N + LP F +L+ + L
Sbjct: 23 ACPSRCSCSGTTVSCQSKSLTSVPSGIPSSTTILYLHGNKLQSLPNGVFEKLTQLKELSL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
N++ + F L SLT L L+ N L +P G+F L +L T+ + N + C+C +
Sbjct: 83 RTNKLQSLPNGVFDKLTSLTYLNLHTNQLKSIPQGMFDNLKKLDTVYLYNNPWDCECPGI 142
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKI 265
+L W+++ + Y + +L P+ KCSGS RS I
Sbjct: 143 HYLSEWIRKNSGIVYYWTT--------RKVLQ-PDSA-KCSGSGKPVRSII 183
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 8/110 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V C+ K L VP +P +TT I + L S + F++ T
Sbjct: 23 ACPSRCSCSGTTVSCQSKSLTSVPSGIPSSTT-------ILYLHGNKLQSLPNGVFEKLT 75
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
+ L N + LP F L + L N + +P F N K+L
Sbjct: 76 QLKELSLRTNKLQSLPNGVFDKLTSLTYLNLHTNQLKSIPQGMFDNLKKL 125
>gi|76799974|gb|ABA55628.1| leucine rich repeat containing 4 protein precursor [Bos taurus]
Length = 597
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 2/131 (1%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL + N E+ P +F L+++ + +Q+S + +AF GL SL L L +NNL+ L
Sbjct: 221 ELEMSGNHFPEIRPGSFHGLGSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSL 280
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAPSHIKGQNIL 245
P +F L L L + N + CDC + WL WL+ Y +C AP H++G+ ++
Sbjct: 281 PHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAPLHMRGRYLV 340
Query: 246 DIPEHEFKCSG 256
++ + F+CS
Sbjct: 341 EVDQASFQCSA 351
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 96 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRI 153
+CP C C++ V C +GL++VP +P T L L +N+I + F + L +
Sbjct: 44 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVL 103
Query: 154 DLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
L +N I ++ V AF GL SL +L L +N LT +P G F L +LR L + N
Sbjct: 104 QLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNN 156
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAP 62
L +NNL+ LP +F L L L + N + CDC + WL WL+ Y +C AP
Sbjct: 272 LAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAP 331
Query: 63 SHIKGQNILDIPEHEFKCSGP--VEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
H++G+ ++++ + F+CS P ++ P +E R A+ + CR ++ V
Sbjct: 332 LHMRGRYLVEVDQASFQCSAPFIMDAPRDLNISEG------RMAE--LKCRTPPMSSVKW 383
Query: 121 LLPEATT 127
LLP T
Sbjct: 384 LLPNGTV 390
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 294 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
+CP C C++ V C +GL++VP +P T L M + ++ + + ++ +
Sbjct: 44 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHH---- 99
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+L +N I ++ AF L + L N +T +P AF +LR +
Sbjct: 100 --LEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLREL 151
>gi|76161938|gb|ABA40059.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 169
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 67/129 (51%), Gaps = 1/129 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ + C E+ L VP+ +P T LRL +N IT+L P F L+++ L
Sbjct: 1 ACPSQCSCSGTDIHCHERSLRSVPVGIPTTTQILRLYRNQITKLEPGVFDRLVNLQQLYL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
S NQ+ + F L LT L L+NN L +P G F L L + + N + C C +
Sbjct: 61 SGNQLQALPAGVFDKLTQLTHLGLHNNQLKSIPRGAFDNLKSLTHIWLFGNPWDCACSDI 120
Query: 215 SWLHRWLKR 223
+L RW+ +
Sbjct: 121 LYLSRWIGQ 129
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTEL-TYMVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ + C E+ L VP+ +P T L Y I +++ + F R
Sbjct: 1 ACPSQCSCSGTDIHCHERSLRSVPVGIPTTTQILRLYRNQITKLEPGV--------FDRL 52
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N + L N + LP F +L + L N + +P AF N K L +
Sbjct: 53 VNLQQLYLSGNQLQALPAGVFDKLTQLTHLGLHNNQLKSIPRGAFDNLKSLTHI 106
>gi|391327659|ref|XP_003738314.1| PREDICTED: slit homolog 1 protein-like [Metaseiulus occidentalis]
Length = 1222
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 22/212 (10%)
Query: 20 ELFRLRTLRISENSFICDCHLSWLHRW-----LKRYPRLGLYTK--CFAPSHIKGQNI-- 70
+L RL RI++N F CDC + W+ + ++YPR+ + C P + +
Sbjct: 654 DLSRLPEFRIADNPFFCDCAMEWMQKINELDESRQYPRIADLDRLECQLPFSRRRTKVPL 713
Query: 71 LDIPEHEFKCSGPVEKPT-------GECAAEPSCPHPCRC-ADG-----IVDCREKGLNK 117
L +F C C E +CP C C AD +VDC LN
Sbjct: 714 LQANSSDFLCKYKSHCFALCHCCEFDACDCEMTCPDSCTCYADSTWNSNVVDCSFSNLNV 773
Query: 118 VPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSL 177
+P+ +P TEL L+ ND+ L +F K+LR + L+ + + + F GL +L +L
Sbjct: 774 IPVRVPMDVTELYLDGNDMPHLASHSFIGRKQLRVVYLNNSNVQAIRNRTFTGLANLQAL 833
Query: 178 TLNNNNLTYLPDGVFAELFRLRTLRISENSFI 209
L++N +T L F L LR L +S N +
Sbjct: 834 HLDHNKITALHGFEFENLTTLRELYLSHNRLV 865
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 99/432 (22%), Positives = 165/432 (38%), Gaps = 104/432 (24%)
Query: 8 NNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKG 67
+NL +G+F L LR L +S N+ ++W + P +K
Sbjct: 520 DNLLRDINGLFMNLGHLRLLNVSRNA------ITW-------------FDYALVPPALKH 560
Query: 68 QNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKV-PILLPEAT 126
LD+ +E + G + G + I+D L ++ LP
Sbjct: 561 ---LDLHSNEIEALGNYFEMEGTMHLK------------ILDASYNKLREINAASLPHRV 605
Query: 127 TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTY 186
+ L N I+ + P F N L ++D++ N++ + ++A + LK+ L+
Sbjct: 606 ESVALSNNLISVIHPFTFMNKANLTKVDMTFNRLQNIDINALR-LKTTQDLS-------- 656
Query: 187 LPDGVFAELFRLRTLRISENSFICDCHLSWLHRW-----LKRYPRLGLYTK--CFAPSHI 239
RL RI++N F CDC + W+ + ++YPR+ + C P
Sbjct: 657 ----------RLPEFRIADNPFFCDCAMEWMQKINELDESRQYPRIADLDRLECQLPFSR 706
Query: 240 KGQNI--LDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPH 297
+ + L +F C Y+ C F + C + C E +CP
Sbjct: 707 RRTKVPLLQANSSDFLCK----------YKSHC---FALCHCCEFDA----CDCEMTCPD 749
Query: 298 PCRC-ADG-----IVDCREKGLNKVPILLPEATTELT-------YMVSIDRVD-KVLLYS 343
C C AD +VDC LN +P+ +P TEL ++ S + K L
Sbjct: 750 SCTCYADSTWNSNVVDCSFSNLNVIPVRVPMDVTELYLDGNDMPHLASHSFIGRKQLRVV 809
Query: 344 YISN-NFKRWTNRS---------RRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPP 393
Y++N N + NR+ L+ N IT L F N LR + L N + +
Sbjct: 810 YLNNSNVQAIRNRTFTGLANLQALHLDHNKITALHGFEFENLTTLRELYLSHNRLVSISN 869
Query: 394 KAFANYKRLRRM 405
+ FA + LR +
Sbjct: 870 RTFAQLRSLRVL 881
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 89/211 (42%), Gaps = 22/211 (10%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N + + D FA L+ L TL +S N + L Y GLY +
Sbjct: 351 LDGNQIETIDDNAFAALYNLHTLILSGNRL----------KNLDAYTFNGLYV---LSNL 397
Query: 65 IKGQNILD--IPEHEFKCSG--PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
N+L+ P+ CS +E + + P R + D ++ V
Sbjct: 398 ALDSNLLEELHPDTFRNCSSLQDLELSDNQLSQIPRGLQHLRFLRAL-DLSGNLIDDVSN 456
Query: 121 LLPEATTELR---LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSL 177
L T L L +N I + FA ++ LRR+DLSKNQI+ + F +L ++
Sbjct: 457 LTSANLTNLHSLSLSKNRIGNMTRGTFAKFRSLRRLDLSKNQIAGLEHGIFDDAPALNTI 516
Query: 178 TLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
L +N L + +G+F L LR L +S N+
Sbjct: 517 QLQDNLLRDI-NGLFMNLGHLRLLNVSRNAI 546
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 106/275 (38%), Gaps = 25/275 (9%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLT--Y 186
L + N + LPPK L+ + L N I ++ F+GL+ L L L++N ++ +
Sbjct: 251 LDMSNNRLNTLPPKVLQGSGDLKELYLQNNSIGLLSPSTFRGLQQLVVLNLSDNQISSEW 310
Query: 187 LPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTK-CFAPSHIKGQNIL 245
+ FA+L RL L +S N L+ T+ H+ G I
Sbjct: 311 IAPETFADLIRLVVLHLSSNR-------------LRHINATAFATQYSLQILHLDGNQIE 357
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPV--EKPTGECAAEPSCPHPCRCAD 303
I ++ F + ++ T + D + +N V E P R
Sbjct: 358 TIDDNAF-AALYNLHTLILSGNRLKNLDAYTFNGLYVLSNLALDSNLLEELHPDTFRNCS 416
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL--LYSYISNNFKRWTNRSRRLEQ 361
+ D E N++ +P L ++ ++D ++ + + S N S L +
Sbjct: 417 SLQDL-ELSDNQLS-QIPRGLQHLRFLRALDLSGNLIDDVSNLTSANLTNL--HSLSLSK 472
Query: 362 NDITELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
N I + FA ++ LRR+ L +N I L F
Sbjct: 473 NRIGNMTRGTFAKFRSLRRLDLSKNQIAGLEHGIF 507
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 109 DCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAF 168
DC+ GL EL L N++ + +AF N L+++ L +NQ++++ A
Sbjct: 194 DCQLNGL-----------LELDLSDNNLRYIDDRAFENLGNLKKLYLQRNQLAQLVETAL 242
Query: 169 QGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
GL L L ++NN L LP V L+ L + NS
Sbjct: 243 SGLSRLQLLDMSNNRLNTLPPKVLQGSGDLKELYLQNNSI 282
>gi|395539345|ref|XP_003771631.1| PREDICTED: leucine-rich repeat-containing protein 4 [Sarcophilus
harrisii]
Length = 652
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 2/131 (1%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL + N E+ P +F L+++ + +Q+S + +AF GL SL L L +NNL+ L
Sbjct: 225 ELEMSGNHFPEIRPGSFRGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSL 284
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAPSHIKGQNIL 245
P +F L L L + N + CDC + WL WL+ Y +C AP H++G+ ++
Sbjct: 285 PHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAPLHMRGRYLV 344
Query: 246 DIPEHEFKCSG 256
++ + F+CS
Sbjct: 345 EVDQTSFQCSA 355
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 96 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRI 153
+CP C C++ V C +GL++VP +P T L L +N+I + F + L +
Sbjct: 48 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVL 107
Query: 154 DLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
L +N I ++ V AF GL SL +L L +N LT +P G F L +LR L + N
Sbjct: 108 QLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNN 160
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAP 62
L +NNL+ LP +F L L L + N + CDC + WL WL+ Y +C AP
Sbjct: 276 LAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAP 335
Query: 63 SHIKGQNILDIPEHEFKCSGP--VEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
H++G+ ++++ + F+CS P ++ P +E R A+ + CR ++ V
Sbjct: 336 LHMRGRYLVEVDQTSFQCSAPFIMDAPRDLNISE------GRMAE--LKCRTPPMSSVRW 387
Query: 121 LLPEATT 127
LLP T
Sbjct: 388 LLPNGTV 394
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 294 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
+CP C C++ V C +GL++VP +P T L M + ++ + + ++ +
Sbjct: 48 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHH---- 103
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+L +N I ++ AF L + L N +T +P AF +LR +
Sbjct: 104 --LEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLREL 155
>gi|78100668|gb|ABB21155.1| variable lymphocyte receptor A [Eptatretus stoutii]
Length = 323
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Query: 101 CRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKN 158
C C D VDC KGL +P +P TTEL L+ N +++L PKAF N +L + L N
Sbjct: 34 CTCNDQTKNVDCSSKGLTAIPSNIPVETTELNLQYNSLSKLSPKAFHNLNKLTFLSLGTN 93
Query: 159 QISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
Q+ + + F L +L L LN N L LP G+F +L +L LR+S N
Sbjct: 94 QLQALPIGVFDQLVNLADLRLNINQLKSLPSGIFDKLTKLTDLRLSSNKL 143
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 50/127 (39%), Gaps = 20/127 (15%)
Query: 299 CRCADGI--VDCREKGLNKVPILLPEATTELTYMV---------SIDRVDKVLLYSYISN 347
C C D VDC KGL +P +P TTEL + ++K+ S +N
Sbjct: 34 CTCNDQTKNVDCSSKGLTAIPSNIPVETTELNLQYNSLSKLSPKAFHNLNKLTFLSLGTN 93
Query: 348 N--------FKRWTNRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFAN 398
F + N + RL N + LP F +L +RL N + LP F
Sbjct: 94 QLQALPIGVFDQLVNLADLRLNINQLKSLPSGIFDKLTKLTDLRLSSNKLQSLPEGVFDK 153
Query: 399 YKRLRRM 405
+L+ +
Sbjct: 154 LTQLKTL 160
>gi|62460576|ref|NP_001014938.1| leucine-rich repeat-containing protein 4 [Bos taurus]
gi|61555503|gb|AAX46724.1| netrin-G1 ligand [Bos taurus]
gi|296488306|tpg|DAA30419.1| TPA: leucine rich repeat containing 4 [Bos taurus]
Length = 602
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 2/131 (1%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL + N E+ P +F L+++ + +Q+S + +AF GL SL L L +NNL+ L
Sbjct: 221 ELEMSGNHFPEIRPGSFHGLGSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSL 280
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAPSHIKGQNIL 245
P +F L L L + N + CDC + WL WL+ Y +C AP H++G+ ++
Sbjct: 281 PHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAPLHMRGRYLV 340
Query: 246 DIPEHEFKCSG 256
++ + F+CS
Sbjct: 341 EVDQASFQCSA 351
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 96 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRI 153
+CP C C++ V C +GL++VP +P T L L +N+I + F + L +
Sbjct: 44 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVL 103
Query: 154 DLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
L +N I ++ V AF GL SL +L L +N LT +P G F L +LR L + N
Sbjct: 104 QLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNN 156
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAP 62
L +NNL+ LP +F L L L + N + CDC + WL WL+ Y +C AP
Sbjct: 272 LAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAP 331
Query: 63 SHIKGQNILDIPEHEFKCSGP--VEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
H++G+ ++++ + F+CS P ++ P +E R A+ + CR ++ V
Sbjct: 332 LHMRGRYLVEVDQASFQCSAPFIMDAPRDLNISEG------RMAE--LKCRTPPMSSVKW 383
Query: 121 LLPEATT 127
LLP T
Sbjct: 384 LLPNGTV 390
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 294 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
+CP C C++ V C +GL++VP +P T L M + ++ + + ++ +
Sbjct: 44 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHH---- 99
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+L +N I ++ AF L + L N +T +P AF +LR +
Sbjct: 100 --LEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLREL 151
>gi|332021317|gb|EGI61692.1| Putative G-protein coupled receptor 125 [Acromyrmex echinatior]
Length = 1603
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L QN I+ + AF L+R+DLS N+I+ +A F L +L L LN N+LT L
Sbjct: 110 LDLSQNQISIIDSYAFKKLPNLKRLDLSGNKITALAPSLFHDLLTLERLKLNGNSLTTLK 169
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFAPSHIKGQNI 244
+G+F L L+ L +S N + CDC L W W+ +L L KC +P+ KGQ++
Sbjct: 170 EGIFHGLNMLKQLDLSNNPWKCDCDLYWFSNWIYNSSIKLNLTPKCSSPAFAKGQSL 226
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFAPS 63
LN N+LT L +G+F L L+ L +S N + CDC L W W+ +L L KC +P+
Sbjct: 160 LNGNSLTTLKEGIFHGLNMLKQLDLSNNPWKCDCDLYWFSNWIYNSSIKLNLTPKCSSPA 219
Query: 64 HIKGQNI 70
KGQ++
Sbjct: 220 FAKGQSL 226
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 14/120 (11%)
Query: 300 RCADGIVDCREKGLNKVPILLPEA--TTELTYMVSID---------RVD--KVLLYSYIS 346
+C+DG+ + ++ +NKV + L + + + Y+V +D R+D K + S
Sbjct: 39 KCSDGLEEIKDVDVNKVNVELIQLDLSKNVIYVVEVDAFKNLTNLRRLDLSKNKIISIGE 98
Query: 347 NNFKRWTNRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F N R L QN I+ + AF L+R+ L N IT L P F + L R+
Sbjct: 99 GCFNGLANLERLDLSQNQISIIDSYAFKKLPNLKRLDLSGNKITALAPSLFHDLLTLERL 158
>gi|296217798|ref|XP_002755173.1| PREDICTED: leucine-rich repeat-containing G-protein coupled
receptor 4 isoform 1 [Callithrix jacchus]
Length = 951
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 64/121 (52%), Gaps = 3/121 (2%)
Query: 87 PTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFA 145
P+G AA P C PC C D VDC KGL VP L T L + N+IT+LP AF
Sbjct: 21 PSG--AAPPLCAAPCSCDGDRRVDCSGKGLTAVPEGLSAFTQALDISMNNITQLPEDAFK 78
Query: 146 NYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISE 205
N+ L + L+ N +S + +A GLK L LTL NN L +P L L++LR+
Sbjct: 79 NFPFLEELQLAGNDLSFIHPNALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDA 138
Query: 206 N 206
N
Sbjct: 139 N 139
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 51/122 (41%), Gaps = 33/122 (27%)
Query: 285 PTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYS 343
P+G AA P C PC C D VDC KGL VP E + T + I
Sbjct: 21 PSG--AAPPLCAAPCSCDGDRRVDCSGKGLTAVP----EGLSAFTQALDI---------- 64
Query: 344 YISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLR 403
N+IT+LP AF N+ L ++L ND++ + P A + K L+
Sbjct: 65 ----------------SMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPNALSGLKELK 108
Query: 404 RM 405
+
Sbjct: 109 VL 110
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 65/149 (43%), Gaps = 8/149 (5%)
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCAD----GIVDCREKGLNKVP- 119
I NI +PE FK + P + + S HP + ++ + L VP
Sbjct: 64 ISMNNITQLPEDAFK-NFPFLEELQLAGNDLSFIHPNALSGLKELKVLTLQNNQLKTVPS 122
Query: 120 --ILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSL 177
I A LRL+ N IT +P +F +LR + L N +++V V L +L +L
Sbjct: 123 EAIRGLSALQSLRLDANHITSVPEDSFKGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQAL 182
Query: 178 TLNNNNLTYLPDGVFAELFRLRTLRISEN 206
TL N ++ +PD F L L L + N
Sbjct: 183 TLALNKISSIPDFAFTNLSSLVVLHLHNN 211
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 90/219 (41%), Gaps = 39/219 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
++ NN+T LP+ F L L+++ N LS++H P A S
Sbjct: 64 ISMNNITQLPEDAFKNFPFLEELQLAGND------LSFIH------PN--------ALSG 103
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECA-------AEPSCPHPCRCADGIVDCR-----E 112
+K +L + ++ K + P E G A A P G+V R +
Sbjct: 104 LKELKVLTLQNNQLK-TVPSEAIRGLSALQSLRLDANHITSVPEDSFKGLVQLRHLWLDD 162
Query: 113 KGLNKVPIL----LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAF 168
L +VP+ LP L L N I+ +P AF N L + L N+I ++ F
Sbjct: 163 NSLTEVPVHPLSNLP-TLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCF 221
Query: 169 QGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENS 207
GL +L +L LN NNL P + A L L+ L NS
Sbjct: 222 HGLDNLETLDLNYNNLGEFPQAIKA-LPSLKELGFHSNS 259
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
A E+ L++N I ++ F LR +DLS+N I ++ + AF L +T+L ++ N
Sbjct: 365 HALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIHIRAFATLGPITNLDVSFNE 424
Query: 184 LTYLP 188
LT P
Sbjct: 425 LTSFP 429
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N+I +LP +F L I L +NQI ++ FQGL SL L L+ N + +
Sbjct: 348 LDLSYNNIRDLP--SFNGCHALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIH 405
Query: 189 DGVFAELFRLRTLRISEN 206
FA L + L +S N
Sbjct: 406 IRAFATLGPITNLDVSFN 423
>gi|194667747|ref|XP_614752.3| PREDICTED: probable G-protein coupled receptor 125 [Bos taurus]
Length = 1215
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 64/126 (50%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N I+ + P AF L+R+DL+ N+I + D F+GL +L L L+ N + L
Sbjct: 66 LDLRNNLISSIDPGAFWGLSSLKRLDLTNNRIGCLNADIFRGLTNLVRLNLSGNLFSSLS 125
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
G F L LR+L +CDC++ W+HRW+K T+C P ++ Q + +
Sbjct: 126 QGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCVYPKSLQAQPVTGVK 185
Query: 249 EHEFKC 254
+ C
Sbjct: 186 QELLTC 191
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N + L G F L LR+L +CDC++ W+HRW+K T+C P
Sbjct: 116 LSGNLFSSLSQGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCVYPKS 175
Query: 65 IKGQNILDIPEHEFKCSGPVEKPT 88
++ Q + + + C P+E P+
Sbjct: 176 LQAQPVTGVKQELLTCDPPLELPS 199
>gi|355749189|gb|EHH53588.1| Putative G-protein coupled receptor 125, partial [Macaca
fascicularis]
Length = 1235
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 64/126 (50%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N I+ + P AF L+R+DL+ N+I + D F+GL +L L L+ N + L
Sbjct: 24 LDLRNNLISSIDPGAFWGLSSLKRLDLTNNRIGCLNADIFRGLTNLVRLNLSGNLFSSLS 83
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
G F L LR+L +CDC++ W+HRW+K T+C P ++ Q + +
Sbjct: 84 QGTFDYLASLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCVYPKSLQAQPVTGVK 143
Query: 249 EHEFKC 254
+ C
Sbjct: 144 QELLTC 149
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N + L G F L LR+L +CDC++ W+HRW+K T+C P
Sbjct: 74 LSGNLFSSLSQGTFDYLASLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCVYPKS 133
Query: 65 IKGQNILDIPEHEFKCSGPVEKPT 88
++ Q + + + C P+E P+
Sbjct: 134 LQAQPVTGVKQELLTCDPPLELPS 157
>gi|284010741|dbj|BAI66850.1| variable lymphocyte receptor A [Eptatretus burgeri]
Length = 215
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 85/183 (46%), Gaps = 25/183 (13%)
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
VDC K L +P +P T +L L+ N ++ LPPKAF N +L + L NQ+ +
Sbjct: 24 VDCSYKKLTAIPSNIPADTKKLELDYNKLSSLPPKAFHNLNKLTFLSLGNNQLQTLPAGV 83
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTL--------RISENSF----------- 208
F L +LT L LN N L LP+GVF +L L+TL R+ E +F
Sbjct: 84 FDQLVNLTDLRLNRNQLKSLPEGVFDKLTELKTLYLNNNQLKRVPEEAFDSLEKLKMLQL 143
Query: 209 -----ICDCH-LSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETR 262
C C+ + ++ +WLK+ GL A G+ +L+I E + S T
Sbjct: 144 QSNPWDCTCNGIIYMAKWLKKKADEGLGGVDTAGCEKGGKAVLEITEKDAASDCVSPNTT 203
Query: 263 SKI 265
+ I
Sbjct: 204 TAI 206
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-LSWLHRWLKRYPRLGLYTKCFAPS 63
LNNN L +P+ F L +L+ L++ N + C C+ + ++ +WLK+ GL A
Sbjct: 119 LNNNQLKRVPEEAFDSLEKLKMLQLQSNPWDCTCNGIIYMAKWLKKKADEGLGGVDTAGC 178
Query: 64 HIKGQNILDIPEHE 77
G+ +L+I E +
Sbjct: 179 EKGGKAVLEITEKD 192
>gi|51980481|gb|AAH81550.1| Cpn2 protein, partial [Mus musculus]
Length = 413
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 109/258 (42%), Gaps = 20/258 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFI-CDCHL-----SWLHRWLKRYPRLGLYTK 58
L+NN L LP+G L L+ L + N+ HL S WL+ L
Sbjct: 66 LSNNMLARLPEGALGSLSSLQELFLDGNAITELSPHLFSQLFSLEMLWLQHNAICHLPVS 125
Query: 59 CFAPSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKV 118
F+ H L + ++ + P G A H + + E +
Sbjct: 126 LFSSLH--NLTFLSLKDNALRT-----LPEGLFAHNQGLLHLSLSYNQLETIPEGAFTNL 178
Query: 119 PILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLT 178
L+ L L N IT+LP F N ++L ++ L N ++ + F L L L
Sbjct: 179 SRLV-----SLTLSHNAITDLPEHVFRNLEQLVKLSLDSNNLTALHPALFHNLSRLQLLN 233
Query: 179 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL--GLYTKCFAP 236
L+ N LT LP G+F + L L + N + CDCHLS+L WL+ Y +T C P
Sbjct: 234 LSRNQLTTLPGGIFDTNYDLFNLALLGNPWQCDCHLSYLTSWLRLYNNQISNTHTFCAGP 293
Query: 237 SHIKGQNILDIPEHEFKC 254
+++KGQ + ++ + + C
Sbjct: 294 AYLKGQLVPNLKQEQLIC 311
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 117/277 (42%), Gaps = 45/277 (16%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
L+L+ N + LP + F + + LR ++L++N ++++ AFQ L L L L+NN L L
Sbjct: 15 SLQLQGNQLRTLPGRLFQSLRDLRTLNLAQNLLTQLPKGAFQSLTGLQMLKLSNNMLARL 74
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN--IL 245
P+G L L+ L + N+ + P L+++ F+ + Q+ I
Sbjct: 75 PEGALGSLSSLQELFLDGNAIT------------ELSPH--LFSQLFSLEMLWLQHNAIC 120
Query: 246 DIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGI 305
+P F SS+ + + ++ + P G A H
Sbjct: 121 HLPVSLF----SSLHNLTFLSLKDNALR---------TLPEGLFAHNQGLLH-------- 159
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL--LYSYISNNFKRWTNRSRRLEQND 363
+ L +P A T L+ +VS+ + L ++ N ++ S L+ N+
Sbjct: 160 LSLSYNQLETIP---EGAFTNLSRLVSLTLSHNAITDLPEHVFRNLEQLVKLS--LDSNN 214
Query: 364 ITELPPKAFANYKRLRRIRLEQNDITELPPKAF-ANY 399
+T L P F N RL+ + L +N +T LP F NY
Sbjct: 215 LTALHPALFHNLSRLQLLNLSRNQLTTLPGGIFDTNY 251
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 106/269 (39%), Gaps = 40/269 (14%)
Query: 139 LPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRL 198
LP F + L + L NQ+ + FQ L+ L +L L N LT LP G F L L
Sbjct: 2 LPEDLFCHMDILESLQLQGNQLRTLPGRLFQSLRDLRTLNLAQNLLTQLPKGAFQSLTGL 61
Query: 199 RTLRISENSFICDCHLSWLHRWLKRYPRLGLYT-KCFAPSHIKGQNILDIPEHEFKCSGS 257
+ L++S N L R P L + + G I ++ H F
Sbjct: 62 QMLKLSNN-------------MLARLPEGALGSLSSLQELFLDGNAITELSPHLFS-QLF 107
Query: 258 SMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVP 317
S+E + C ++S + T + ++ L +P
Sbjct: 108 SLEMLWLQHNAICHLPVSLFSS--LHNLT------------------FLSLKDNALRTLP 147
Query: 318 ILLPEATTELTYM-VSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYK 376
L L ++ +S ++++ + ++ N R S L N IT+LP F N +
Sbjct: 148 EGLFAHNQGLLHLSLSYNQLETIPEGAF--TNLSRLV--SLTLSHNAITDLPEHVFRNLE 203
Query: 377 RLRRIRLEQNDITELPPKAFANYKRLRRM 405
+L ++ L+ N++T L P F N RL+ +
Sbjct: 204 QLVKLSLDSNNLTALHPALFHNLSRLQLL 232
>gi|359321352|ref|XP_003639568.1| PREDICTED: relaxin receptor 1-like [Canis lupus familiaris]
Length = 763
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 68/131 (51%), Gaps = 2/131 (1%)
Query: 76 HEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQND 135
+ S P E T EC S P C C VDC E L VP + T + L N
Sbjct: 85 YRMTSSYPFEAQTSECLVG-SVPMQCVCRGLEVDCDETNLRAVPSV-SSNVTLMSLRWNL 142
Query: 136 ITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
I +LPP F Y L+++ L N+I + + AF+GL SLT L L++N +T+L GVF +L
Sbjct: 143 IRKLPPDGFRKYHNLQKLCLQNNKIRSIPIYAFRGLHSLTKLYLSHNRITFLKPGVFEDL 202
Query: 196 FRLRTLRISEN 206
RL L I +N
Sbjct: 203 HRLEWLIIEDN 213
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 54/126 (42%), Gaps = 10/126 (7%)
Query: 278 NSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVD 337
+S P E T EC S P C C VDC E L V P ++ +T M +
Sbjct: 89 SSYPFEAQTSECLVG-SVPMQCVCRGLEVDCDETNLRAV----PSVSSNVTLM----SLR 139
Query: 338 KVLLYSYISNNFKRWTNRSRR-LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L+ + F+++ N + L+ N I +P AF L ++ L N IT L P F
Sbjct: 140 WNLIRKLPPDGFRKYHNLQKLCLQNNKIRSIPIYAFRGLHSLTKLYLSHNRITFLKPGVF 199
Query: 397 ANYKRL 402
+ RL
Sbjct: 200 EDLHRL 205
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ EL L N I LPP+ F + K L +++LS N I K+ D F L L SL+L
Sbjct: 300 QKLAELDLGSNKIENLPPQVFKDLKELSQLNLSYNPIQKIQADQFDYLVKLKSLSLEGIE 359
Query: 184 LTYLPDGVFAELFRL 198
++ + +F L L
Sbjct: 360 ISNIQQRMFRPLMNL 374
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 79/200 (39%), Gaps = 31/200 (15%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N +T+L GVF +L RL L I +N HLS + +P
Sbjct: 186 LSHNRITFLKPGVFEDLHRLEWLIIEDN------HLSRI-----------------SPLT 222
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCA-DGIVDCREKGLNKVPILLP 123
G N L + + +P C + R + D L + +
Sbjct: 223 FYGLNSLIL-------LALMNNVLTHLPDKPLCQYMPRLHWLDLEDNHIHNLRNLTFISC 275
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
T L + +N I L FA ++L +DL N+I + F+ LK L+ L L+ N
Sbjct: 276 GNLTVLVMRKNKINHLNENTFAPLQKLAELDLGSNKIENLPPQVFKDLKELSQLNLSYNP 335
Query: 184 LTYLPDGVFAELFRLRTLRI 203
+ + F L +L++L +
Sbjct: 336 IQKIQADQFDYLVKLKSLSL 355
>gi|76162029|gb|ABA40100.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 168
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 14/169 (8%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C + L VP +P T LRL N IT+L P F + + L ++L
Sbjct: 1 ACPSQCSCSGTDVQCDRRSLVSVPAGIPTTTKILRLYINQITKLEPGVFDSLRELTYLNL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
+ NQ++ + V F L LT L+L NN L +P G F L L + + N + C+C +
Sbjct: 61 AVNQLTALPVGVFDKLTQLTQLSLYNNQLKSIPRGAFDNLKSLTYIYLFNNPWDCECSDI 120
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L W+ ++ + PS G + KCSG++ R+
Sbjct: 121 LYLKNWIVQHASI------VNPSGNGGVD-------NVKCSGTNTPVRA 156
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V C + L VP +P T L + I+++ K L + ++ + T
Sbjct: 1 ACPSQCSCSGTDVQCDRRSLVSVPAGIPTTTKIL--RLYINQITK--LEPGVFDSLRELT 56
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N +T LP F +L ++ L N + +P AF N K L +
Sbjct: 57 --YLNLAVNQLTALPVGVFDKLTQLTQLSLYNNQLKSIPRGAFDNLKSLTYI 106
>gi|297475731|ref|XP_002688216.1| PREDICTED: probable G-protein coupled receptor 125 [Bos taurus]
gi|296486668|tpg|DAA28781.1| TPA: G protein-coupled receptor 125-like [Bos taurus]
Length = 1277
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 64/126 (50%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N I+ + P AF L+R+DL+ N+I + D F+GL +L L L+ N + L
Sbjct: 66 LDLRNNLISSIDPGAFWGLSSLKRLDLTNNRIGCLNADIFRGLTNLVRLNLSGNLFSSLS 125
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
G F L LR+L +CDC++ W+HRW+K T+C P ++ Q + +
Sbjct: 126 QGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCVYPKSLQAQPVTGVK 185
Query: 249 EHEFKC 254
+ C
Sbjct: 186 QELLTC 191
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N + L G F L LR+L +CDC++ W+HRW+K T+C P
Sbjct: 116 LSGNLFSSLSQGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCVYPKS 175
Query: 65 IKGQNILDIPEHEFKCSGPVEKPT 88
++ Q + + + C P+E P+
Sbjct: 176 LQAQPVTGVKQELLTCDPPLELPS 199
>gi|284010918|dbj|BAI66934.1| variable lymphocyte receptor B [Eptatretus burgeri]
Length = 235
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 58/111 (52%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDCR K L VP +P +TT+L LE N + LP F L+ + L
Sbjct: 23 ACPSRCSCSGTTVDCRSKSLTSVPSGIPSSTTKLWLESNKLQSLPNGVFDKLTELKDLQL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
+NQ+ + F L LT L L +N L LP+GVF EL L L + N
Sbjct: 83 YQNQLQSLPGGVFDKLTQLTKLYLYSNQLQSLPNGVFDELTSLTQLYLGGN 133
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ VDCR K L VP +P +TT+L ++ L S + F + T
Sbjct: 23 ACPSRCSCSGTTVDCRSKSLTSVPSGIPSSTTKL-------WLESNKLQSLPNGVFDKLT 75
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ +L QN + LP F +L ++ L N + LP F L ++
Sbjct: 76 ELKDLQLYQNQLQSLPGGVFDKLTQLTKLYLYSNQLQSLPNGVFDELTSLTQL 128
>gi|50086881|gb|AAT70321.1| variable lymphocyte receptor [Petromyzon marinus]
Length = 274
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 67/133 (50%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDCR K + VP +P L L N IT+L P F + +L R+ L
Sbjct: 21 ACPSQCSCDQTTVDCRNKRFSSVPAGIPTDRQNLWLNNNQITKLEPGVFDSLAQLTRLGL 80
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
S NQ + + F + +L + L+NN L +P G F L L + + N + C C +
Sbjct: 81 SHNQFTALPARVFDRMGNLQQINLSNNQLKSIPRGAFDNLKSLTHIWLYGNPWDCACSDI 140
Query: 215 SWLHRWLKRYPRL 227
+L RW+ ++P +
Sbjct: 141 LYLSRWISQHPGV 153
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C VDCR K + VP +P T ++ +++ K L + ++ + T
Sbjct: 21 ACPSQCSCDQTTVDCRNKRFSSVPAGIP--TDRQNLWLNNNQITK--LEPGVFDSLAQLT 76
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N T LP + F L++I L N + +P AF N K L +
Sbjct: 77 RLG--LSHNQFTALPARVFDRMGNLQQINLSNNQLKSIPRGAFDNLKSLTHI 126
>gi|348554239|ref|XP_003462933.1| PREDICTED: G-protein coupled receptor 124 [Cavia porcellus]
Length = 1307
Score = 84.0 bits (206), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/131 (33%), Positives = 68/131 (51%), Gaps = 1/131 (0%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L L N I+ + P AF L+R+DLS N+I + D F+GL L L ++ N + L
Sbjct: 111 KLDLRNNVISVVQPGAFLGLGELKRLDLSNNRIGCLTSDTFRGLPRLVRLNISGNIFSSL 170
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFAPSHIKGQNILD 246
GVF EL L+ + CDCHL WL W + + +L T C P + G+ +
Sbjct: 171 QPGVFDELSALKVVDFGTEFLTCDCHLGWLLPWARNHSLQLSERTLCAYPGALHGRTLGS 230
Query: 247 IPEHEFKCSGS 257
+ E++ +C G+
Sbjct: 231 LQENQLRCEGA 241
Score = 51.6 bits (122), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 1 MPR----TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGL 55
+PR ++ N + L GVF EL L+ + CDCHL WL W + + +L
Sbjct: 154 LPRLVRLNISGNIFSSLQPGVFDELSALKVVDFGTEFLTCDCHLGWLLPWARNHSLQLSE 213
Query: 56 YTKCFAPSHIKGQNILDIPEHEFKCSGPVE 85
T C P + G+ + + E++ +C G +E
Sbjct: 214 RTLCAYPGALHGRTLGSLQENQLRCEGALE 243
>gi|50086885|gb|AAT70323.1| variable lymphocyte receptor [Petromyzon marinus]
Length = 274
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 67/133 (50%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDCR K + VP +P L L N IT+L P F + +L R+ L
Sbjct: 21 ACPSQCSCDQTTVDCRNKRFSSVPAGIPTDRQNLWLNNNQITKLEPGVFDSLAQLTRLGL 80
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
S NQ + + F + +L + L+NN L +P G F L L + + N + C C +
Sbjct: 81 SHNQFTALPARVFDRMGNLQQINLSNNQLKSIPRGAFDNLKSLTHIWLYGNPWDCACSDI 140
Query: 215 SWLHRWLKRYPRL 227
+L RW+ ++P +
Sbjct: 141 LYLSRWISQHPGV 153
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C VDCR K + VP +P T ++ +++ K L + ++ + T
Sbjct: 21 ACPSQCSCDQTTVDCRNKRFSSVPAGIP--TDRQNLWLNNNQITK--LEPGVFDSLAQLT 76
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N T LP + F L++I L N + +P AF N K L +
Sbjct: 77 RLG--LSHNQFTALPARVFDRMGNLQQINLSNNQLKSIPRGAFDNLKSLTHI 126
>gi|20521932|dbj|BAA96055.2| KIAA1531 protein [Homo sapiens]
Length = 1206
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 1/131 (0%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L L N I+ + P AF L+R+DLS N+I + + FQGL L L ++ N + L
Sbjct: 197 KLDLRNNIISTVQPGAFLGLGELKRLDLSNNRIGCLTSETFQGLPRLLRLNISGNIFSSL 256
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTKCFAPSHIKGQNILD 246
GVF EL L+ + + CDCHL WL W + R +L +T C PS + Q +
Sbjct: 257 QPGVFDELPALKVVDLGTEFLTCDCHLRWLLPWAQNRSLQLSEHTLCAYPSALHAQALGS 316
Query: 247 IPEHEFKCSGS 257
+ E + C G+
Sbjct: 317 LQEAQLCCEGA 327
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTKCFAPS 63
++ N + L GVF EL L+ + + CDCHL WL W + R +L +T C PS
Sbjct: 248 ISGNIFSSLQPGVFDELPALKVVDLGTEFLTCDCHLRWLLPWAQNRSLQLSEHTLCAYPS 307
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ Q + + E + C G +E
Sbjct: 308 ALHAQALGSLQEAQLCCEGALE 329
>gi|344279114|ref|XP_003411336.1| PREDICTED: probable G-protein coupled receptor 125 [Loxodonta
africana]
Length = 1314
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 83/201 (41%), Gaps = 37/201 (18%)
Query: 91 CAAE--PSCPHPCR---------CADGIVDCREKGLNKV--PILLPEATTELRLEQNDIT 137
CAA P C R A+G V C L +V P LP T L L N I+
Sbjct: 28 CAAALPPGCKQDGRPRGTGRAAGAAEGKVVCSSLELAQVLPPDTLPNRTVTLILSNNKIS 87
Query: 138 ELP------------------------PKAFANYKRLRRIDLSKNQISKVAVDAFQGLKS 173
EL P AF L+R+DL+ N+I + D F+GL +
Sbjct: 88 ELKNGSFSGLSLLERLDLRNNLISSIDPGAFWGLSSLKRLDLTNNRIGCLNADIFRGLTN 147
Query: 174 LTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKC 233
L L L+ N + L G F L LR+L +CDC++ W+HRW+K T+C
Sbjct: 148 LVRLNLSGNLFSSLSQGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRC 207
Query: 234 FAPSHIKGQNILDIPEHEFKC 254
P ++ Q + + + C
Sbjct: 208 AYPKSLQAQPVTGVKQELLTC 228
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N + L G F L LR+L +CDC++ W+HRW+K T+C P
Sbjct: 153 LSGNLFSSLSQGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCAYPKS 212
Query: 65 IKGQNILDIPEHEFKCSGPVEKPT 88
++ Q + + + C P+E P+
Sbjct: 213 LQAQPVTGVKQELLTCDAPLELPS 236
>gi|301620086|ref|XP_002939414.1| PREDICTED: leucine-rich repeat-containing protein 4-like [Xenopus
(Silurana) tropicalis]
Length = 641
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 72/131 (54%), Gaps = 2/131 (1%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL + N+ E+ P +F + L+++ + +QI+ + +AF L SL L L +NN+T L
Sbjct: 216 ELEISGNNFPEIKPGSFHGLRSLKKLWIMNSQINTIERNAFDDLTSLVELNLAHNNVTSL 275
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAPSHIKGQNIL 245
P +FA L L L + N + CDC + WL WL+ Y +C +P H++G+ ++
Sbjct: 276 PHDLFAPLKYLVELHLHHNPWDCDCDVLWLSWWLREYIPTNSTCCGRCHSPPHMRGKYVV 335
Query: 246 DIPEHEFKCSG 256
++ F+CS
Sbjct: 336 EVDHSMFQCSA 346
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 64/122 (52%), Gaps = 5/122 (4%)
Query: 90 ECAAEP---SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAF 144
CAA SCP C C++ V C +GL++VP +P T L L +N+I + F
Sbjct: 30 SCAAYSGPQSCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRSLNLMENNIQMIQADTF 89
Query: 145 ANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRIS 204
+ L + L +N I ++ V AF GL SL +L L +N LT +P G F L +LR L +
Sbjct: 90 RHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLR 149
Query: 205 EN 206
N
Sbjct: 150 NN 151
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAP 62
L +NN+T LP +FA L L L + N + CDC + WL WL+ Y +C +P
Sbjct: 267 LAHNNVTSLPHDLFAPLKYLVELHLHHNPWDCDCDVLWLSWWLREYIPTNSTCCGRCHSP 326
Query: 63 SHIKGQNILDIPEHEFKCSGP--VEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
H++G+ ++++ F+CS P ++ P +E R A+ + CR ++ V
Sbjct: 327 PHMRGKYVVEVDHSMFQCSAPFIMDAPRDLNISE------GRMAE--LKCRTSAMSSVRW 378
Query: 121 LLPEATT 127
LLP T
Sbjct: 379 LLPNGTV 385
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 11/123 (8%)
Query: 288 ECAAEP---SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLY 342
CAA SCP C C++ V C +GL++VP +P T L M + ++ + +
Sbjct: 30 SCAAYSGPQSCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRSLNLMENNIQMIQADTF 89
Query: 343 SYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
++ + +L +N I ++ AF L + L N +T +P AF +L
Sbjct: 90 RHLHH------LEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKL 143
Query: 403 RRM 405
R +
Sbjct: 144 REL 146
>gi|296221993|ref|XP_002807534.1| PREDICTED: LOW QUALITY PROTEIN: G-protein coupled receptor 124
[Callithrix jacchus]
Length = 1336
Score = 84.0 bits (206), Expect = 1e-13, Method: Composition-based stats.
Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 1/131 (0%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L L N I+ + P AF L+R+DLS N+I ++ + FQGL L L ++ N + L
Sbjct: 112 KLDLRNNVISTVQPGAFLGLGELKRLDLSNNRIGCLSSETFQGLPRLLRLNISGNIFSSL 171
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTKCFAPSHIKGQNILD 246
GVF EL L+ + + CDCHL WL W + R +L +T C PS + Q +
Sbjct: 172 QPGVFDELPALKVVDLGTEFLTCDCHLRWLLPWARNRSLQLSEHTLCAYPSALHAQALGS 231
Query: 247 IPEHEFKCSGS 257
+ E + C G+
Sbjct: 232 LQEAQLCCEGA 242
Score = 51.6 bits (122), Expect = 7e-04, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 1 MPRTL----NNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGL 55
+PR L + N + L GVF EL L+ + + CDCHL WL W + R +L
Sbjct: 155 LPRLLRLNISGNIFSSLQPGVFDELPALKVVDLGTEFLTCDCHLRWLLPWARNRSLQLSE 214
Query: 56 YTKCFAPSHIKGQNILDIPEHEFKCSGPVE 85
+T C PS + Q + + E + C G +E
Sbjct: 215 HTLCAYPSALHAQALGSLQEAQLCCEGALE 244
>gi|301761442|ref|XP_002916142.1| PREDICTED: leucine-rich glioma-inactivated protein 1-like isoform 2
[Ailuropoda melanoleuca]
Length = 533
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 83/205 (40%), Gaps = 6/205 (2%)
Query: 89 GECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYK 148
G+ A+P CP C C C + +P +P L N + AF
Sbjct: 34 GKKPAKPKCPAVCTCTKDNALC--ENARSIPRTVPPDVISLLFTSNSFDVISDDAFIGLP 91
Query: 149 RLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
L + + N I ++ F+GLKSL L+L NNNL LP +F L L + + NSF
Sbjct: 92 HLEYLFIENNNIKSISRHTFRGLKSLIHLSLANNNLQTLPKDIFKGLDSLTNVDLRGNSF 151
Query: 209 ICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYRE 268
CDC L WL WL C P K + I + +F C + + +
Sbjct: 152 NCDCKLKWLVEWLGHTNATVEDIYCEGPPEYKKRKINSLSPKDFDCIITEFAKSQDLPYQ 211
Query: 269 ECSTDFHPYNS---CPVEKP-TGEC 289
S D Y + + +P TG+C
Sbjct: 212 SLSIDTFSYMNDEYVVIAQPFTGKC 236
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 34/77 (44%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L NNNL LP +F L L + + NSF CDC L WL WL C P
Sbjct: 121 SLANNNLQTLPKDIFKGLDSLTNVDLRGNSFNCDCKLKWLVEWLGHTNATVEDIYCEGPP 180
Query: 64 HIKGQNILDIPEHEFKC 80
K + I + +F C
Sbjct: 181 EYKKRKINSLSPKDFDC 197
>gi|119926472|dbj|BAF43262.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 165
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 74/164 (45%), Gaps = 12/164 (7%)
Query: 101 CRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQI 160
C C+ V C E+ L VP +P T L L N IT+L P F L+ + L NQ+
Sbjct: 3 CSCSGTTVHCHERSLASVPAGIPTTTQRLYLGSNQITKLEPGVFDRLVNLKELHLYSNQM 62
Query: 161 SKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-LSWLHR 219
+ F L LT L L NN L +P G F L L + + N + C C + +L R
Sbjct: 63 EALPAGVFDKLTQLTHLVLYNNQLKSIPRGAFDNLKSLTHIYLYNNPWDCACSDILYLSR 122
Query: 220 WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
W+ ++P + +K N ++ +CSG++ R+
Sbjct: 123 WISQHPGV-----------VKNPNTGNVDPDSARCSGTNTPVRA 155
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 8/108 (7%)
Query: 299 CRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSR 357
C C+ V C E+ L VP +P TT+ Y+ S +++ K+ F R N +
Sbjct: 3 CSCSGTTVHCHERSLASVPAGIP-TTTQRLYLGS-NQITKLE-----PGVFDRLVNLKEL 55
Query: 358 RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + LP F +L + L N + +P AF N K L +
Sbjct: 56 HLYSNQMEALPAGVFDKLTQLTHLVLYNNQLKSIPRGAFDNLKSLTHI 103
>gi|431902263|gb|ELK08764.1| Putative G-protein coupled receptor 124 [Pteropus alecto]
Length = 1298
Score = 83.6 bits (205), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/131 (34%), Positives = 69/131 (52%), Gaps = 1/131 (0%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L L+ N I+ + P AF L+R+DLS N+I +A + FQGL+ L L ++ N + L
Sbjct: 71 KLDLKNNVISTVQPGAFLGLGELKRLDLSNNRIGCIASETFQGLRRLLRLNISGNIFSSL 130
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFAPSHIKGQNILD 246
GVF EL L+ + CDC L WL W + + +L T C PS + Q +
Sbjct: 131 QPGVFDELPALKLVDFGTEFLTCDCRLRWLLSWARNHSVQLSERTLCAYPSALHAQALGS 190
Query: 247 IPEHEFKCSGS 257
+ E + +C G+
Sbjct: 191 LQEAQLRCEGA 201
Score = 47.4 bits (111), Expect = 0.013, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFAPS 63
++ N + L GVF EL L+ + CDC L WL W + + +L T C PS
Sbjct: 122 ISGNIFSSLQPGVFDELPALKLVDFGTEFLTCDCRLRWLLSWARNHSVQLSERTLCAYPS 181
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ Q + + E + +C G +E
Sbjct: 182 ALHAQALGSLQEAQLRCEGALE 203
>gi|47220207|emb|CAF98972.1| unnamed protein product [Tetraodon nigroviridis]
Length = 216
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 74/135 (54%), Gaps = 7/135 (5%)
Query: 96 SCPHPCRCAD----GIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
+CP C C + +V C+ + L+K+P LP+ TT L L N IT +P +AF L+
Sbjct: 2 ACPSSCHCMEKSGMTVVQCKSRSLDKIPSDLPKDTTVLLLGSNHITHIPNQAFRELHYLQ 61
Query: 152 RIDLSKNQISKVAVDAFQGL-KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFIC 210
+DLS N I +V V AFQG+ SL L L+NN + +P F+ L + +S N + C
Sbjct: 62 ELDLSNNDIDRVEVGAFQGVFDSLLVLDLSNNRIQSVPKEAFSRLS--ARINLSNNPWFC 119
Query: 211 DCHLSWLHRWLKRYP 225
+C L + R L+ P
Sbjct: 120 ECTLQEVLRELQLDP 134
>gi|47229367|emb|CAF99355.1| unnamed protein product [Tetraodon nigroviridis]
Length = 603
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 73/140 (52%), Gaps = 2/140 (1%)
Query: 73 IPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADG--IVDCREKGLNKVPILLPEATTELR 130
+P + C G + A+E P PCRC+ V+C + L VP LPE T L
Sbjct: 5 VPVRLWLCWGALSFLGTAAASEARPPCPCRCSAAPPQVNCSDGQLAAVPDALPEDTQVLN 64
Query: 131 LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDG 190
L +N I L + F +L +DLS N+++ + +AF GL+ L +L+L N+L P G
Sbjct: 65 LRRNRIRTLVRQQFRTLTQLVDLDLSDNKMASIEAEAFLGLRGLLTLSLARNSLKIFPAG 124
Query: 191 VFAELFRLRTLRISENSFIC 210
F+ L LRTL IS+N +
Sbjct: 125 AFSGLPSLRTLDISDNQILV 144
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 113/295 (38%), Gaps = 52/295 (17%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-----LSWLHRWLKRYPRLGLYT- 57
+L N+L P G F+ L LRTL IS+N + LS L R L +
Sbjct: 112 SLARNSLKIFPAGAFSGLPSLRTLDISDNQILVFLDSTFRDLSALQRLKAAGNDLVFVSP 171
Query: 58 KCFAPS------HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADG---IV 108
+ FA H+ G N+ +P + + C + + P +D +
Sbjct: 172 QAFAGLTSLQELHLDGCNLSAVPSEALAQLPGLRRFHFLCLSLKTLP-----SDSFRPLQ 226
Query: 109 DCREKGLNKVPIL--------LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQI 160
+E ++ P+L T L + ++ + +P + + L R+DLS N I
Sbjct: 227 RLKELLISDSPLLENLSGNGLFGLNLTSLAITRSRLDAVPYGSLQHLVYLVRLDLSYNPI 286
Query: 161 S------------------------KVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELF 196
+ V V AF+GL+ L L ++ N L+ L GVF
Sbjct: 287 ACIHGGLLGGLLRLQELSLVGGSLLTVEVGAFRGLRHLRLLNVSQNLLSTLEVGVFHSAE 346
Query: 197 RLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
L+ L + +N CDC L WL R + G C ++ + LD+ E +
Sbjct: 347 ALQALGLEKNPLACDCRLLWLVRRRQNLDFGGNAPTCSTSVQLQDWSFLDLAEVQ 401
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 8/116 (6%)
Query: 291 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFK 350
A P CP C A V+C + L VP LPE T L R +++ + + F+
Sbjct: 27 ARPPCPCRCSAAPPQVNCSDGQLAAVPDALPEDTQVLNL-----RRNRI--RTLVRQQFR 79
Query: 351 RWTNR-SRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
T L N + + +AF + L + L +N + P AF+ LR +
Sbjct: 80 TLTQLVDLDLSDNKMASIEAEAFLGLRGLLTLSLARNSLKIFPAGAFSGLPSLRTL 135
>gi|260787773|ref|XP_002588926.1| hypothetical protein BRAFLDRAFT_89115 [Branchiostoma floridae]
gi|229274098|gb|EEN44937.1| hypothetical protein BRAFLDRAFT_89115 [Branchiostoma floridae]
Length = 354
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 66/116 (56%), Gaps = 1/116 (0%)
Query: 95 PSCPHPCRCADGIVDCREKGLNKVPILLPEATTE-LRLEQNDITELPPKAFANYKRLRRI 153
+CP C C G V C + L VP +P + + L L+ N++T +P +AF NY L +
Sbjct: 77 AACPQACNCFPGTVFCSNRRLRAVPKGIPPSGMQRLYLDGNNLTLVPARAFLNYTELTNL 136
Query: 154 DLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFI 209
DLS + I +A AF GL +L SL +NNNN+T L +F L+ L++L + N +
Sbjct: 137 DLSNSFIRNMAEGAFMGLNNLRSLKVNNNNMTTLRGSIFQGLYLLKSLNLKTNRLV 192
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 41/113 (36%), Gaps = 29/113 (25%)
Query: 293 PSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRW 352
+CP C C G V C + L VP +P + + Y
Sbjct: 77 AACPQACNCFPGTVFCSNRRLRAVPKGIPPSGMQRLY----------------------- 113
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L+ N++T +P +AF NY L + L + I + AF LR +
Sbjct: 114 ------LDGNNLTLVPARAFLNYTELTNLDLSNSFIRNMAEGAFMGLNNLRSL 160
Score = 37.7 bits (86), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 135 DITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAE 194
++ + + F + LR +++ N + + +FQ L+ L SL + N+L L D F
Sbjct: 213 NMVNVSTRLFRHLGNLRYLEMKDNGLKTIQSYSFQDLRGLYSLDVRENDLQNLEDYAFFG 272
Query: 195 LFRLRTLRISENSF 208
L LR L +S+N+
Sbjct: 273 LDSLRNLYLSDNNL 286
>gi|163879088|gb|ABY47911.1| variable lymphocyte receptor B [Petromyzon marinus]
Length = 270
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C+E+ L VP +P T L L N IT+L P F + +L ++L
Sbjct: 21 ACPSQCSCSGTTVNCQERSLASVPAGIPTTTQVLHLYINQITKLEPGVFDSLTQLTYLNL 80
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
+ NQ++ + V F L LT L L+ N L +P GVF L L + + N + C+C +
Sbjct: 81 AVNQLTALPVGVFDKLTKLTHLALHINQLKSIPMGVFDNLKSLTHIYLFNNPWDCECSDI 140
Query: 215 SWLHRWLKRYPRL 227
+L W+ ++ +
Sbjct: 141 LYLKNWIVQHASI 153
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTEL-TYMVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ V+C+E+ L VP +P T L Y+ I +++ + S +
Sbjct: 21 ACPSQCSCSGTTVNCQERSLASVPAGIPTTTQVLHLYINQITKLEPGVFDSLTQLTY--- 77
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N +T LP F +L + L N + +P F N K L +
Sbjct: 78 ----LNLAVNQLTALPVGVFDKLTKLTHLALHINQLKSIPMGVFDNLKSLTHI 126
>gi|37543522|gb|AAM09084.1| tumor endothelial marker 5 precursor, partial [Homo sapiens]
Length = 320
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 71/145 (48%), Gaps = 1/145 (0%)
Query: 114 GLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKS 173
GL L +L L N I+ + P AF L+R+DLS N+I + + FQGL
Sbjct: 98 GLRNGSFLGLSLLEKLDLRNNIISTVQPGAFLGLGELKRLDLSNNRIGCLTSETFQGLPR 157
Query: 174 LTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTK 232
L L ++ N + L GVF EL L+ + + CDCHL WL W + R +L +T
Sbjct: 158 LLRLNISGNIFSSLQPGVFDELPALKVVDLGTEFLTCDCHLRWLLPWAQNRSLQLSEHTL 217
Query: 233 CFAPSHIKGQNILDIPEHEFKCSGS 257
C PS + Q + + E + C G+
Sbjct: 218 CAYPSALHAQALGSLQEAQLCCEGA 242
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 1 MPRTL----NNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGL 55
+PR L + N + L GVF EL L+ + + CDCHL WL W + R +L
Sbjct: 155 LPRLLRLNISGNIFSSLQPGVFDELPALKVVDLGTEFLTCDCHLRWLLPWAQNRSLQLSE 214
Query: 56 YTKCFAPSHIKGQNILDIPEHEFKCSGPVEKPT 88
+T C PS + Q + + E + C G +E T
Sbjct: 215 HTLCAYPSALHAQALGSLQEAQLCCEGALELHT 247
>gi|403271340|ref|XP_003927585.1| PREDICTED: probable G-protein coupled receptor 125, partial
[Saimiri boliviensis boliviensis]
Length = 1246
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 69/150 (46%), Gaps = 2/150 (1%)
Query: 108 VDCREKGLNKV--PILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAV 165
V C L +V P LP T L L N I+EL +F+ L R+DL N IS +
Sbjct: 13 VVCSSLELAQVLPPDTLPNRTVTLILSNNKISELKNGSFSGLSLLERLDLRNNLISSIDP 72
Query: 166 DAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP 225
AF GL SL L L NN + L +F L L L +CDC++ W+HRW+K
Sbjct: 73 GAFWGLSSLKRLDLTNNRIGCLNADIFRGLTNLVRLEFQTEYLLCDCNILWMHRWVKERN 132
Query: 226 RLGLYTKCFAPSHIKGQNILDIPEHEFKCS 255
T+C P ++ Q + + + C
Sbjct: 133 ITVRDTRCVYPKSLQAQPVTGVKQELLTCG 162
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L NN + L +F L L L +CDC++ W+HRW+K T+C P
Sbjct: 86 LTNNRIGCLNADIFRGLTNLVRLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCVYPKS 145
Query: 65 IKGQNILDIPEHEFKCSGPVEKPT 88
++ Q + + + C P+E P+
Sbjct: 146 LQAQPVTGVKQELLTCGPPLELPS 169
>gi|326932748|ref|XP_003212475.1| PREDICTED: LOW QUALITY PROTEIN: G-protein coupled receptor 124-like
[Meleagris gallopavo]
Length = 1216
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL 184
A +L L+ N I+ + P AF L+R+DLS N+I ++ FQGL +L L ++ N
Sbjct: 35 ALEKLDLKNNLISTVQPGAFLGLPELKRLDLSNNRIGCLSASVFQGLTNLLRLNMSGNIF 94
Query: 185 TYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTKCFAPSHIKGQN 243
+ LP GVF EL L+ + + CDC+L W+ W + R ++ T C P H+
Sbjct: 95 SSLPPGVFDELPSLKVVDFATEYLTCDCNLLWVLPWARNRSAQISERTLCVYPRHLHSTP 154
Query: 244 ILDIPEHEFKCSGS 257
+ E + +C+G+
Sbjct: 155 LRSAQESQLQCAGT 168
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTKCFAPS 63
++ N + LP GVF EL L+ + + CDC+L W+ W + R ++ T C P
Sbjct: 89 MSGNIFSSLPPGVFDELPSLKVVDFATEYLTCDCNLLWVLPWARNRSAQISERTLCVYPR 148
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPT 88
H+ + E + +C+G E T
Sbjct: 149 HLHSTPLRSAQESQLQCAGTPELHT 173
>gi|148922284|gb|AAI46775.1| GPR124 protein [Homo sapiens]
Length = 1114
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 71/145 (48%), Gaps = 1/145 (0%)
Query: 114 GLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKS 173
GL L +L L N I+ + P AF L+R+DLS N+I + + FQGL
Sbjct: 91 GLRNGSFLGLSLLEKLDLRNNIISTVQPGAFLGLGELKRLDLSNNRIGCLTSETFQGLPR 150
Query: 174 LTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTK 232
L L ++ N + L GVF EL L+ + + CDCHL WL W + R +L +T
Sbjct: 151 LLRLNISGNIFSSLQPGVFDELPALKVVDLGTEFLTCDCHLRWLLPWAQNRSLQLSEHTL 210
Query: 233 CFAPSHIKGQNILDIPEHEFKCSGS 257
C PS + Q + + E + C G+
Sbjct: 211 CAYPSALHAQALGSLQEAQLCCEGA 235
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 1 MPRTL----NNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGL 55
+PR L + N + L GVF EL L+ + + CDCHL WL W + R +L
Sbjct: 148 LPRLLRLNISGNIFSSLQPGVFDELPALKVVDLGTEFLTCDCHLRWLLPWAQNRSLQLSE 207
Query: 56 YTKCFAPSHIKGQNILDIPEHEFKCSGPVEKPT 88
+T C PS + Q + + E + C G +E T
Sbjct: 208 HTLCAYPSALHAQALGSLQEAQLCCEGALELHT 240
>gi|300934750|ref|NP_116166.9| G-protein coupled receptor 124 precursor [Homo sapiens]
gi|221222450|sp|Q96PE1.2|GP124_HUMAN RecName: Full=G-protein coupled receptor 124; AltName: Full=Tumor
endothelial marker 5; Flags: Precursor
gi|119583759|gb|EAW63355.1| G protein-coupled receptor 124, isoform CRA_b [Homo sapiens]
gi|119583760|gb|EAW63356.1| G protein-coupled receptor 124, isoform CRA_b [Homo sapiens]
Length = 1338
Score = 83.6 bits (205), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 1/131 (0%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L L N I+ + P AF L+R+DLS N+I + + FQGL L L ++ N + L
Sbjct: 112 KLDLRNNIISTVQPGAFLGLGELKRLDLSNNRIGCLTSETFQGLPRLLRLNISGNIFSSL 171
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTKCFAPSHIKGQNILD 246
GVF EL L+ + + CDCHL WL W + R +L +T C PS + Q +
Sbjct: 172 QPGVFDELPALKVVDLGTEFLTCDCHLRWLLPWAQNRSLQLSEHTLCAYPSALHAQALGS 231
Query: 247 IPEHEFKCSGS 257
+ E + C G+
Sbjct: 232 LQEAQLCCEGA 242
Score = 51.6 bits (122), Expect = 7e-04, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 1 MPRTL----NNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGL 55
+PR L + N + L GVF EL L+ + + CDCHL WL W + R +L
Sbjct: 155 LPRLLRLNISGNIFSSLQPGVFDELPALKVVDLGTEFLTCDCHLRWLLPWAQNRSLQLSE 214
Query: 56 YTKCFAPSHIKGQNILDIPEHEFKCSGPVE 85
+T C PS + Q + + E + C G +E
Sbjct: 215 HTLCAYPSALHAQALGSLQEAQLCCEGALE 244
>gi|119583761|gb|EAW63357.1| G protein-coupled receptor 124, isoform CRA_c [Homo sapiens]
Length = 1121
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 71/145 (48%), Gaps = 1/145 (0%)
Query: 114 GLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKS 173
GL L +L L N I+ + P AF L+R+DLS N+I + + FQGL
Sbjct: 98 GLRNGSFLGLSLLEKLDLRNNIISTVQPGAFLGLGELKRLDLSNNRIGCLTSETFQGLPR 157
Query: 174 LTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTK 232
L L ++ N + L GVF EL L+ + + CDCHL WL W + R +L +T
Sbjct: 158 LLRLNISGNIFSSLQPGVFDELPALKVVDLGTEFLTCDCHLRWLLPWAQNRSLQLSEHTL 217
Query: 233 CFAPSHIKGQNILDIPEHEFKCSGS 257
C PS + Q + + E + C G+
Sbjct: 218 CAYPSALHAQALGSLQEAQLCCEGA 242
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 1 MPRTL----NNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGL 55
+PR L + N + L GVF EL L+ + + CDCHL WL W + R +L
Sbjct: 155 LPRLLRLNISGNIFSSLQPGVFDELPALKVVDLGTEFLTCDCHLRWLLPWAQNRSLQLSE 214
Query: 56 YTKCFAPSHIKGQNILDIPEHEFKCSGPVEKPT 88
+T C PS + Q + + E + C G +E T
Sbjct: 215 HTLCAYPSALHAQALGSLQEAQLCCEGALELHT 247
>gi|126507842|gb|ABO15193.1| variable lymphocyte receptor B diversity region [Petromyzon
marinus]
Length = 172
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C++K L VP +P T L L N IT+L P F + +L ++L
Sbjct: 1 ACPSQCSCSGTEVHCQKKSLASVPAGIPTTTQVLYLHVNQITKLEPGVFDSLTQLTYLNL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ++ + V F L LT L L+ N L +P G F L L + + N + C C +
Sbjct: 61 GGNQLTALPVGVFDKLTKLTHLALHINQLKSVPRGAFDNLKSLTHIWLYNNPWDCACSDI 120
Query: 215 SWLHRWLKRYPRL 227
+L RW+ +P +
Sbjct: 121 LYLSRWISHHPGI 133
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V C++K L VP +P TT++ Y+ ++++ K+ + S +
Sbjct: 1 ACPSQCSCSGTEVHCQKKSLASVPAGIP-TTTQVLYL-HVNQITKLEPGVFDSLTQLTYL 58
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N L N +T LP F +L + L N + +P AF N K L +
Sbjct: 59 N----LGGNQLTALPVGVFDKLTKLTHLALHINQLKSVPRGAFDNLKSLTHI 106
>gi|119583758|gb|EAW63354.1| G protein-coupled receptor 124, isoform CRA_a [Homo sapiens]
gi|119583763|gb|EAW63359.1| G protein-coupled receptor 124, isoform CRA_a [Homo sapiens]
Length = 1308
Score = 83.6 bits (205), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 1/131 (0%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L L N I+ + P AF L+R+DLS N+I + + FQGL L L ++ N + L
Sbjct: 112 KLDLRNNIISTVQPGAFLGLGELKRLDLSNNRIGCLTSETFQGLPRLLRLNISGNIFSSL 171
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTKCFAPSHIKGQNILD 246
GVF EL L+ + + CDCHL WL W + R +L +T C PS + Q +
Sbjct: 172 QPGVFDELPALKVVDLGTEFLTCDCHLRWLLPWAQNRSLQLSEHTLCAYPSALHAQALGS 231
Query: 247 IPEHEFKCSGS 257
+ E + C G+
Sbjct: 232 LQEAQLCCEGA 242
Score = 51.6 bits (122), Expect = 7e-04, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 1 MPRTL----NNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGL 55
+PR L + N + L GVF EL L+ + + CDCHL WL W + R +L
Sbjct: 155 LPRLLRLNISGNIFSSLQPGVFDELPALKVVDLGTEFLTCDCHLRWLLPWAQNRSLQLSE 214
Query: 56 YTKCFAPSHIKGQNILDIPEHEFKCSGPVE 85
+T C PS + Q + + E + C G +E
Sbjct: 215 HTLCAYPSALHAQALGSLQEAQLCCEGALE 244
>gi|168278911|dbj|BAG11335.1| G-protein coupled receptor 124 [synthetic construct]
Length = 1121
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 71/145 (48%), Gaps = 1/145 (0%)
Query: 114 GLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKS 173
GL L +L L N I+ + P AF L+R+DLS N+I + + FQGL
Sbjct: 98 GLRNGSFLGLSLLEKLDLRNNIISTVQPGAFLGLGELKRLDLSNNRIGCLTSETFQGLPR 157
Query: 174 LTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTK 232
L L ++ N + L GVF EL L+ + + CDCHL WL W + R +L +T
Sbjct: 158 LLRLNISGNIFSSLQPGVFDELPALKVVDLGTEFLTCDCHLRWLLPWAQNRSLQLSEHTL 217
Query: 233 CFAPSHIKGQNILDIPEHEFKCSGS 257
C PS + Q + + E + C G+
Sbjct: 218 CAYPSALHAQALGSLQEAQLCCEGA 242
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 1 MPRTL----NNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGL 55
+PR L + N + L GVF EL L+ + + CDCHL WL W + R +L
Sbjct: 155 LPRLLRLNISGNIFSSLQPGVFDELPALKVVDLGTEFLTCDCHLRWLLPWAQNRSLQLSE 214
Query: 56 YTKCFAPSHIKGQNILDIPEHEFKCSGPVEKPT 88
+T C PS + Q + + E + C G +E T
Sbjct: 215 HTLCAYPSALHAQALGSLQEAQLCCEGALELHT 247
>gi|15987491|gb|AAL11992.1|AF378755_1 tumor endothelial marker 5 precursor [Homo sapiens]
gi|28195605|gb|AAO27354.1| G protein-coupled receptor 124 [Homo sapiens]
Length = 1331
Score = 83.6 bits (205), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 1/131 (0%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L L N I+ + P AF L+R+DLS N+I + + FQGL L L ++ N + L
Sbjct: 105 KLDLRNNIISTVQPGAFLGLGELKRLDLSNNRIGCLTSETFQGLPRLLRLNISGNIFSSL 164
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTKCFAPSHIKGQNILD 246
GVF EL L+ + + CDCHL WL W + R +L +T C PS + Q +
Sbjct: 165 QPGVFDELPALKVVDLGTEFLTCDCHLRWLLPWAQNRSLQLSEHTLCAYPSALHAQALGS 224
Query: 247 IPEHEFKCSGS 257
+ E + C G+
Sbjct: 225 LQEAQLCCEGA 235
Score = 51.6 bits (122), Expect = 7e-04, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 1 MPRTL----NNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGL 55
+PR L + N + L GVF EL L+ + + CDCHL WL W + R +L
Sbjct: 148 LPRLLRLNISGNIFSSLQPGVFDELPALKVVDLGTEFLTCDCHLRWLLPWAQNRSLQLSE 207
Query: 56 YTKCFAPSHIKGQNILDIPEHEFKCSGPVE 85
+T C PS + Q + + E + C G +E
Sbjct: 208 HTLCAYPSALHAQALGSLQEAQLCCEGALE 237
>gi|76161983|gb|ABA40080.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 209
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 58/113 (51%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDCR K + VP +P T L L N IT+L P F L+++ L
Sbjct: 1 ACPSQCSCDQTTVDCRNKRFSSVPAGIPTTTQVLYLHVNQITKLEPGVFDRLVNLQKLYL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
S NQ+ + F L LT+L L+NN LT LP G F + L+ L ++ N
Sbjct: 61 SGNQLQALPAGVFDSLTQLTTLYLSNNQLTALPSGAFDRMVNLQKLWLNSNQL 113
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C VDCR K + VP +P TT++ Y+ ++++ K+ F R
Sbjct: 1 ACPSQCSCDQTTVDCRNKRFSSVPAGIP-TTTQVLYL-HVNQITKL-----EPGVFDRLV 53
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N + L N + LP F + +L + L N +T LP AF L+++
Sbjct: 54 NLQKLYLSGNQLQALPAGVFDSLTQLTTLYLSNNQLTALPSGAFDRMVNLQKL 106
>gi|194227431|ref|XP_001916378.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
G-protein coupled receptor 6 [Equus caballus]
Length = 965
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 80 CSGPVEKPTGECAAEPSCPHPCRCA-DGIV---DCREKGLNKVPILLPEATTELRLEQND 135
C+ P + + +CP PC C DGI+ DC E GL+ VP L T L L N+
Sbjct: 17 CTTPCVRGAPQPGPGTTCPAPCHCQEDGIMLSADCSELGLSAVPGGLDPLTAYLDLSMNN 76
Query: 136 ITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
+TEL P F+ + L + LS N +S++ AF GL SL L L NN L +P EL
Sbjct: 77 LTELRPGLFSRLRFLEELRLSGNHLSQIPGQAFSGLHSLKILMLQNNELAGVPAEALGEL 136
Query: 196 FRLRTLRISEN 206
L++LR+ N
Sbjct: 137 RSLQSLRLDAN 147
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 158/413 (38%), Gaps = 70/413 (16%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ NNLT L G+F+ L L LR+S N HLS + A S
Sbjct: 72 LSMNNLTELRPGLFSRLRFLEELRLSGN------HLSQIPGQ--------------AFSG 111
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+ IL + +E +G + GE + S + + +GL+ +
Sbjct: 112 LHSLKILMLQNNEL--AGVPAEALGELRSLQSLRLDANLISLVPERSFEGLSSL------ 163
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL 184
L L+ N +TE+P +A N L+ + L+ N+IS + AFQ L SL L L+NN +
Sbjct: 164 --RHLWLDDNVLTEIPVRALNNLPALQAMTLALNRISHIPDYAFQNLTSLVVLHLHNNRI 221
Query: 185 TYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNI 244
+L F L L TL ++ N R L R LG + NI
Sbjct: 222 QHLGTHSFEGLHNLETLDLNYNELR---EFPIAIRTLGRLQELGFHNN----------NI 268
Query: 245 LDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADG 304
IPE F ++T H Y++ P++ G A + +G
Sbjct: 269 KAIPERAF-VGNPLLQT------------IHFYDN-PIQF-VGRSAFQYLPKLHTLSLNG 313
Query: 305 IVDCRE----KGLNKVPIL-LPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-- 357
D +E KG + IL L A L ++ ++ + N + + R
Sbjct: 314 ATDIQEFPDLKGTTSLEILTLTRAGIRLLPPGMCQQLPRLRVLELSHNQIEELPSLHRCQ 373
Query: 358 -----RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L+ N I E+ F+ L+ + L N I + P+AF + L ++
Sbjct: 374 KLEEIGLQHNRIWEIGADTFSQLSSLQALDLSWNAIRTIHPEAFVTLRSLVKL 426
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 10/116 (8%)
Query: 294 SCPHPCRCA-DGIV---DCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNF 349
+CP PC C DGI+ DC E GL+ VP L T L +S++ + ++ + F
Sbjct: 33 TCPAPCHCQEDGIMLSADCSELGLSAVPGGLDPLTAYLD--LSMNNLTELRPGLFSRLRF 90
Query: 350 KRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RL N ++++P +AF+ L+ + L+ N++ +P +A + L+ +
Sbjct: 91 LE----ELRLSGNHLSQIPGQAFSGLHSLKILMLQNNELAGVPAEALGELRSLQSL 142
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
E+ L+ N I E+ F+ L+ +DLS N I + +AF L+SL L L +N LT L
Sbjct: 377 EIGLQHNRIWEIGADTFSQLSSLQALDLSWNAIRTIHPEAFVTLRSLVKLDLTDNQLTTL 436
Query: 188 PDGVFAELFRLR 199
P L L+
Sbjct: 437 PLAGLGGLMHLK 448
>gi|50086823|gb|AAT70292.1| variable lymphocyte receptor [Petromyzon marinus]
Length = 163
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 14/168 (8%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C E+ L VP +P T L L N IT+L P F + +L R+DL
Sbjct: 9 ACPSQCSCSGTQVNCHERRLASVPAGIPTTTQVLYLYTNKITKLEPGVFDSLTQLTRLDL 68
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ++ + F L +L L L N LT +P G F L L + + N + C+C +
Sbjct: 69 YNNQLTVLPAGVFDSLVNLQQLYLGGNQLTTVPRGAFDNLKSLTHIWLYNNPWDCECSDI 128
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETR 262
+L W+ ++ + PS G + KCSG++ R
Sbjct: 129 LYLKNWIVQHASI------VNPSGHGGVD-------NVKCSGTNTPVR 163
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C E+ L VP +P TT++ Y+ + +++ K+ F T
Sbjct: 9 ACPSQCSCSGTQVNCHERRLASVPAGIP-TTTQVLYLYT-NKITKLE-----PGVFDSLT 61
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+R L N +T LP F + L+++ L N +T +P AF N K L +
Sbjct: 62 QLTRLDLYNNQLTVLPAGVFDSLVNLQQLYLGGNQLTTVPRGAFDNLKSLTHI 114
>gi|119926533|dbj|BAF43291.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 179
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 67/133 (50%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C+ + VP +P T ELRL N IT+L P F + L+++ L
Sbjct: 11 ACPARCSCSGASVECQSRSFASVPAGIPTTTRELRLYTNQITKLEPGVFDHLANLQQLYL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ+S + F L L L L N L +P G F L L + + N + C C +
Sbjct: 71 GGNQLSALPTGLFDKLTQLVHLELQFNQLKSIPRGAFDNLKSLTHIWLYNNPWDCACSDI 130
Query: 215 SWLHRWLKRYPRL 227
+L RW+ ++P +
Sbjct: 131 LYLSRWISQHPGV 143
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTEL-TYMVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ V+C+ + VP +P T EL Y I +++ ++ +++N + +
Sbjct: 11 ACPARCSCSGASVECQSRSFASVPAGIPTTTRELRLYTNQITKLEPG-VFDHLANLQQLY 69
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N ++ LP F +L + L+ N + +P AF N K L +
Sbjct: 70 ------LGGNQLSALPTGLFDKLTQLVHLELQFNQLKSIPRGAFDNLKSLTHI 116
>gi|47215322|emb|CAG12556.1| unnamed protein product [Tetraodon nigroviridis]
Length = 543
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 97/242 (40%), Gaps = 38/242 (15%)
Query: 95 PSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRL----------------------- 131
P CP C C C + +P P L +
Sbjct: 31 PRCPATCSCTKDSAFCLDT--KAIPRSFPPGIVSLTMVNVAFSTIPEGAFAHLHLLQFLL 88
Query: 132 -EQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDG 190
N T L AFA L+ + + N I ++ F+GLKSLT L+L+NNNL LP G
Sbjct: 89 LNSNTFTLLSDDAFAGLSHLQYLFIENNDIQTLSKFTFRGLKSLTHLSLSNNNLQQLPRG 148
Query: 191 VFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEH 250
+F L L L + N+F CDC + WL WL++ C AP +G+ I ++
Sbjct: 149 LFGPLDVLTDLDLRGNAFRCDCGVRWLVDWLEQTNASVPAVYCAAPFEFQGRRIGELAAR 208
Query: 251 EFKCSGSSMETRSKIYREECSTDFHPYNSCPVE--KPTGECAAEPSCPHPCRCADGIVDC 308
+F C + + +Y+ P+ S VE + G+ A + P CA + D
Sbjct: 209 DFDCITADL----AVYQS------FPFRSVSVETYEFNGDQFATFAQPDSGFCAVYVWDH 258
Query: 309 RE 310
E
Sbjct: 259 VE 260
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L+NNNL LP G+F L L L + N+F CDC + WL WL++ C AP
Sbjct: 136 SLSNNNLQQLPRGLFGPLDVLTDLDLRGNAFRCDCGVRWLVDWLEQTNASVPAVYCAAPF 195
Query: 64 HIKGQNILDIPEHEFKC 80
+G+ I ++ +F C
Sbjct: 196 EFQGRRIGELAARDFDC 212
>gi|18676546|dbj|BAB84925.1| FLJ00170 protein [Homo sapiens]
Length = 1310
Score = 83.6 bits (205), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 1/131 (0%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L L N I+ + P AF L+R+DLS N+I + + FQGL L L ++ N + L
Sbjct: 84 KLDLRNNIISTVQPGAFLGLGELKRLDLSNNRIGCLTSETFQGLPRLLRLNISGNIFSSL 143
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTKCFAPSHIKGQNILD 246
GVF EL L+ + + CDCHL WL W + R +L +T C PS + Q +
Sbjct: 144 QPGVFDELPALKVVDLGTEFLTCDCHLRWLLPWAQNRSLQLSEHTLCAYPSALHAQALGS 203
Query: 247 IPEHEFKCSGS 257
+ E + C G+
Sbjct: 204 LQEAQLCCEGA 214
Score = 51.6 bits (122), Expect = 8e-04, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 1 MPRTL----NNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGL 55
+PR L + N + L GVF EL L+ + + CDCHL WL W + R +L
Sbjct: 127 LPRLLRLNISGNIFSSLQPGVFDELPALKVVDLGTEFLTCDCHLRWLLPWAQNRSLQLSE 186
Query: 56 YTKCFAPSHIKGQNILDIPEHEFKCSGPVE 85
+T C PS + Q + + E + C G +E
Sbjct: 187 HTLCAYPSALHAQALGSLQEAQLCCEGALE 216
>gi|301763707|ref|XP_002917284.1| PREDICTED: probable G-protein coupled receptor 124-like [Ailuropoda
melanoleuca]
Length = 1183
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 67/131 (51%), Gaps = 1/131 (0%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L L N I+ + P AF L+R+DLS N+I + + FQGL L L ++ N + L
Sbjct: 69 KLDLRNNVISTVQPGAFLGLGELKRLDLSNNRIGCLTSETFQGLPRLLRLNISGNIFSSL 128
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTKCFAPSHIKGQNILD 246
GVF EL L+ L + CDC L WL W + R +L +T C P + Q +
Sbjct: 129 QPGVFDELPALKVLDLGTEYLTCDCRLRWLLSWARNRSLQLSEHTLCVYPRALHAQALGG 188
Query: 247 IPEHEFKCSGS 257
+ E + +C G+
Sbjct: 189 LQEAQLRCEGA 199
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 1 MPRTL----NNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGL 55
+PR L + N + L GVF EL L+ L + CDC L WL W + R +L
Sbjct: 112 LPRLLRLNISGNIFSSLQPGVFDELPALKVLDLGTEYLTCDCRLRWLLSWARNRSLQLSE 171
Query: 56 YTKCFAPSHIKGQNILDIPEHEFKCSGPVE 85
+T C P + Q + + E + +C G +E
Sbjct: 172 HTLCVYPRALHAQALGGLQEAQLRCEGALE 201
>gi|119926319|dbj|BAF43200.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 192
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 81/184 (44%), Gaps = 20/184 (10%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C V+C K L VP +P L L+ N IT+L P F L+++ L
Sbjct: 11 ACPAQCSCPGAAVNCNSKSLASVPAGIPSNKQYLALQDNRITKLEPGVFDRLVNLQQLSL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF------I 209
NQ++ + V F L +L L LNNN LT LP GVF +L +L L + N
Sbjct: 71 ESNQLTSLPVGVFDRLVNLQQLWLNNNQLTSLPTGVFDKLTQLTNLELQNNQLKSIPRGA 130
Query: 210 CDCHLSWLHRWLKRYP-----RLGLYTKCFAPSHI-----KGQNILDIPEHEFKCSGSSM 259
D S H WL P LY K + H +G +D KCSG++
Sbjct: 131 FDNLKSLTHIWLFNNPWDCECSDILYLKNWIVQHASIVNPQGHGGVD----NVKCSGTNT 186
Query: 260 ETRS 263
R+
Sbjct: 187 PVRA 190
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C V+C K L VP +P L + +R+ K+ F R
Sbjct: 11 ACPAQCSCPGAAVNCNSKSLASVPAGIPSNKQYLA--LQDNRITKLE-----PGVFDRLV 63
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N + LE N +T LP F L+++ L N +T LP F +L +
Sbjct: 64 NLQQLSLESNQLTSLPVGVFDRLVNLQQLWLNNNQLTSLPTGVFDKLTQLTNL 116
>gi|50086843|gb|AAT70302.1| variable lymphocyte receptor [Petromyzon marinus]
Length = 190
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDCR K + VP +P L L N IT+L P F + +L +DL
Sbjct: 9 ACPSQCSCDQTTVDCRNKRFSSVPAGIPTDRQNLWLNNNQITKLEPGVFDSLAQLTGLDL 68
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF------I 209
S NQ + + F L L L+LN+N LT +P GVF +L +L+ L + +N
Sbjct: 69 SHNQFTALPAQVFDRLVKLKELSLNSNKLTAIPAGVFDKLTQLKQLSLLQNQLKSIPRGA 128
Query: 210 CDCHLSWLHRWLKRYP 225
D S H WL P
Sbjct: 129 FDNLKSLTHIWLYNNP 144
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C VDCR K + VP +P T ++ +++ K L + ++ + T
Sbjct: 9 ACPSQCSCDQTTVDCRNKRFSSVPAGIP--TDRQNLWLNNNQITK--LEPGVFDSLAQLT 64
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N T LP + F +L+ + L N +T +P F +L+++
Sbjct: 65 GLD--LSHNQFTALPAQVFDRLVKLKELSLNSNKLTAIPAGVFDKLTQLKQL 114
>gi|148717095|dbj|BAF63669.1| unnamed protein product [Macaca fascicularis]
Length = 180
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 61/111 (54%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP CRC + C +G + VP + + L L N ITEL FA++ +L + L
Sbjct: 33 ACPPKCRCEKLLFYCDSQGFHSVPNATDKGSLGLSLRHNHITELERDQFASFSQLTWLHL 92
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
NQIS V DAFQGL L L L++N + YLP+ F +L L+ L +S N
Sbjct: 93 DHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFN 143
>gi|119928686|dbj|BAF43164.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 171
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 11/169 (6%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C KG+ VP +P T L L N IT+L P F + L + L
Sbjct: 11 ACPAQCSCSGTTVHCWNKGIASVPAGIPTTTRVLYLNDNQITKLEPGVFDSLVNLEVLGL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
N+++++ F L L L L+ N L +PDG FA L L + + N + C C +
Sbjct: 71 CCNKLTELPSGVFDKLTRLKQLGLDQNQLKSVPDGAFARLSSLTHVWLHTNPWDCACSDI 130
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L RW+ ++P + +G++ + +CSG++ R+
Sbjct: 131 LYLSRWISQHPGVVR----------RGESGYAVDPDHARCSGTNTPVRA 169
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMV--SIDRVDKVLLYSYISNNFKR 351
+CP C C+ V C KG+ VP +P TT + Y+ I +++ + S ++
Sbjct: 11 ACPAQCSCSGTTVHCWNKGIASVPAGIP-TTTRVLYLNDNQITKLEPGVFDSLVNLEV-- 67
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N +TELP F RL+++ L+QN + +P AFA L +
Sbjct: 68 -----LGLCCNKLTELPSGVFDKLTRLKQLGLDQNQLKSVPDGAFARLSSLTHV 116
>gi|354472111|ref|XP_003498284.1| PREDICTED: LOW QUALITY PROTEIN: G-protein coupled receptor 124-like
[Cricetulus griseus]
Length = 1316
Score = 83.2 bits (204), Expect = 2e-13, Method: Composition-based stats.
Identities = 45/131 (34%), Positives = 67/131 (51%), Gaps = 1/131 (0%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L L N I+ + P AF L+R+DLS N+I + + FQGL L L ++ N + L
Sbjct: 93 KLDLRNNVISTVQPGAFLGLGELKRLDLSNNRIGCLTSETFQGLPRLLRLNISGNIFSSL 152
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFAPSHIKGQNILD 246
GVF EL L+ + CDCHL WL W + + +L T C PS + Q +
Sbjct: 153 QPGVFDELPALKVVDFGTEFLTCDCHLRWLLPWARNHSLQLSERTLCAYPSALHAQALSS 212
Query: 247 IPEHEFKCSGS 257
+ E + +C G+
Sbjct: 213 LQEPQLRCEGA 223
Score = 51.6 bits (122), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 1 MPRTL----NNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGL 55
+PR L + N + L GVF EL L+ + CDCHL WL W + + +L
Sbjct: 136 LPRLLRLNISGNIFSSLQPGVFDELPALKVVDFGTEFLTCDCHLRWLLPWARNHSLQLSE 195
Query: 56 YTKCFAPSHIKGQNILDIPEHEFKCSGPVE 85
T C PS + Q + + E + +C G +E
Sbjct: 196 RTLCAYPSALHAQALSSLQEPQLRCEGALE 225
>gi|47210530|emb|CAF90106.1| unnamed protein product [Tetraodon nigroviridis]
Length = 807
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 70/127 (55%), Gaps = 1/127 (0%)
Query: 131 LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDG 190
L+ N I+ + P AF LR++DLS N+I + VDAF+GL +LT L L+ N + + G
Sbjct: 2 LKDNLISSIMPGAFLGLSSLRKLDLSNNRIGCLTVDAFKGLNNLTKLNLSGNIIPTIDQG 61
Query: 191 VFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAPSHIKGQNILDIPE 249
VF EL L+ + + + CDC L W+ + +LG T C P ++G+ + + E
Sbjct: 62 VFQELPSLKLVNFNSDFLTCDCGLHWVPGFFHSSLAQLGDETLCAFPMSLRGKQLRGLRE 121
Query: 250 HEFKCSG 256
++ C G
Sbjct: 122 NQLSCDG 128
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAPS 63
L+ N + + GVF EL L+ + + + CDC L W+ + +LG T C P
Sbjct: 50 LSGNIIPTIDQGVFQELPSLKLVNFNSDFLTCDCGLHWVPGFFHSSLAQLGDETLCAFPM 109
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPT 88
++G+ + + E++ C GP+E T
Sbjct: 110 SLRGKQLRGLRENQLSCDGPLELHT 134
>gi|76161801|gb|ABA39997.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 168
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 14/169 (8%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C KGL VP +P T L L N IT+L P F + L+++ L
Sbjct: 1 ACPSQCSCSGTEVNCWNKGLASVPAGIPTTTRVLHLHTNQITKLEPGVFDSLVNLQQLHL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
+NQ+S + F L +L L+L+ N L +P G F L L + + N + C+C +
Sbjct: 61 YQNQLSALPTGVFDHLVNLQQLSLHTNQLKSIPRGAFDNLKSLTHIWLYSNPWDCECSDI 120
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L W+ ++ + PS G +D KCSG++ R+
Sbjct: 121 LYLKNWIVQHASI------VNPS---GHGGVD----NVKCSGTNTPVRA 156
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTEL-TYMVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ V+C KGL VP +P T L + I +++ + S + N ++
Sbjct: 1 ACPSQCSCSGTEVNCWNKGLASVPAGIPTTTRVLHLHTNQITKLEPGVFDSLV--NLQQ- 57
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L QN ++ LP F + L+++ L N + +P AF N K L +
Sbjct: 58 ----LHLYQNQLSALPTGVFDHLVNLQQLSLHTNQLKSIPRGAFDNLKSLTHI 106
>gi|114619667|ref|XP_528111.2| PREDICTED: G-protein coupled receptor 124 isoform 2 [Pan
troglodytes]
Length = 1338
Score = 83.2 bits (204), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 1/131 (0%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L L N I+ + P AF L+R+DLS N+I + + FQGL L L ++ N + L
Sbjct: 112 KLDLRNNIISTVQPGAFLGLGELKRLDLSNNRIGCLTSETFQGLPRLLRLNISGNIFSSL 171
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTKCFAPSHIKGQNILD 246
GVF EL L+ + + CDCHL WL W + R +L +T C PS + Q +
Sbjct: 172 QPGVFDELPALKVVDLGTEFLTCDCHLRWLLPWAQNRSLQLSEHTLCAYPSALHAQALGS 231
Query: 247 IPEHEFKCSGS 257
+ E + C G+
Sbjct: 232 LQEAQLCCEGA 242
Score = 51.2 bits (121), Expect = 8e-04, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 1 MPRTL----NNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGL 55
+PR L + N + L GVF EL L+ + + CDCHL WL W + R +L
Sbjct: 155 LPRLLRLNISGNIFSSLQPGVFDELPALKVVDLGTEFLTCDCHLRWLLPWAQNRSLQLSE 214
Query: 56 YTKCFAPSHIKGQNILDIPEHEFKCSGPVE 85
+T C PS + Q + + E + C G +E
Sbjct: 215 HTLCAYPSALHAQALGSLQEAQLCCEGALE 244
>gi|109038062|ref|XP_001102321.1| PREDICTED: leucine-rich repeat and transmembrane domain-containing
protein 1 [Macaca mulatta]
Length = 345
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 89/210 (42%), Gaps = 54/210 (25%)
Query: 96 SCPHPCRC--ADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRI 153
CP CRC + VDC ++GL ++P LP T L L+ N I LP AF + L +
Sbjct: 20 GCPDKCRCHSSTNFVDCSQQGLAEIPSHLPPQTRTLHLQDNQIHHLPAFAFTSVPWLTAL 79
Query: 154 DLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENS------ 207
+LS N +S +A AF GL+ L L L N+L L +F L +LR L +S N+
Sbjct: 80 NLSNNSLSDLAPGAFHGLQHLQVLNLTQNSLLSLESRLFHSLPQLRELDLSSNNISHLPT 139
Query: 208 ------------------------------------------FICDCHLSWLHRWLKRYP 225
+ C+CHL L WL+++
Sbjct: 140 SLGETWENLTILAVQQNQLQQLDRALLESMPSVRLLFLKDNLWKCNCHLLGLKLWLEKFI 199
Query: 226 RLGLYTK---CFAPSHIKGQNILDIPEHEF 252
G T C +P KG+++L IP HE
Sbjct: 200 YKGGITDGVICGSPDTWKGKDLLRIP-HEL 228
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 8/114 (7%)
Query: 294 SCPHPCRC--ADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
CP CRC + VDC ++GL ++P LP T T + +++ + +++ S +
Sbjct: 20 GCPDKCRCHSSTNFVDCSQQGLAEIPSHLPPQTR--TLHLQDNQIHHLPAFAFTSVPWLT 77
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N L N +++L P AF + L+ + L QN + L + F + +LR +
Sbjct: 78 ALN----LSNNSLSDLAPGAFHGLQHLQVLNLTQNSLLSLESRLFHSLPQLREL 127
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTK---CF 60
+ N L L + + +R L + +N + C+CHL L WL+++ G T C
Sbjct: 152 AVQQNQLQQLDRALLESMPSVRLLFLKDNLWKCNCHLLGLKLWLEKFIYKGGITDGVICG 211
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCP 98
+P KG+++L IP HE P+ P E +++P P
Sbjct: 212 SPDTWKGKDLLRIP-HELYLPCPLAAPDPE-SSQPQRP 247
>gi|81175517|gb|ABB59095.1| variable lymphocyte receptor A [Eptatretus stoutii]
Length = 276
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 75/154 (48%), Gaps = 3/154 (1%)
Query: 101 CRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKN 158
C C D VDC K L +P +P T L L N + EL PKAF N +L + L N
Sbjct: 34 CTCNDQTKNVDCSSKELTAIPSNIPTDTDRLVLNYNKLRELEPKAFHNLNKLTFLSLDSN 93
Query: 159 QISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-LSWL 217
Q+ + F L LT L LN N L +P+G F L L + ++ N + C C+ + ++
Sbjct: 94 QLQTLPPGVFDNLAKLTRLELNINQLRRVPEGAFDFLSSLSDVTLTNNPWDCTCNDILYM 153
Query: 218 HRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE 251
+WLK+ GL A G+ +L+I E E
Sbjct: 154 AKWLKKKQDEGLGGVDTAGCEEGGKAVLEITEEE 187
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 40/109 (36%), Gaps = 32/109 (29%)
Query: 299 CRCADGI--VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRS 356
C C D VDC K L +P +P T L
Sbjct: 34 CTCNDQTKNVDCSSKELTAIPSNIPTDTDRLV---------------------------- 65
Query: 357 RRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + EL PKAF N +L + L+ N + LPP F N +L R+
Sbjct: 66 --LNYNKLRELEPKAFHNLNKLTFLSLDSNQLQTLPPGVFDNLAKLTRL 112
>gi|76162079|gb|ABA40122.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 172
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 67/133 (50%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C E+ L VP +P T L L N IT+L P F + L ++L
Sbjct: 1 ACPSQCSCSGTQVNCHERSLASVPAGIPTTTQVLYLYTNQITKLEPGVFDSLAALTFLNL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ++ + F L LT L L+ N L +P G F L L + + N + C C +
Sbjct: 61 GNNQLTALPAGVFDKLTQLTRLALSTNQLKSIPRGAFDNLKSLTHIWLFGNPWDCACSDI 120
Query: 215 SWLHRWLKRYPRL 227
+L RW+ ++P +
Sbjct: 121 LYLSRWISQHPGI 133
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS--IDRVDKVLLYSYISNNFKR 351
+CP C C+ V+C E+ L VP +P TT++ Y+ + I +++ + S + F
Sbjct: 1 ACPSQCSCSGTQVNCHERSLASVPAGIP-TTTQVLYLYTNQITKLEPGVFDSLAALTF-- 57
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N +T LP F +L R+ L N + +P AF N K L +
Sbjct: 58 -----LNLGNNQLTALPAGVFDKLTQLTRLALSTNQLKSIPRGAFDNLKSLTHI 106
>gi|81175437|gb|ABB59056.1| variable lymphocyte receptor B [Eptatretus stoutii]
Length = 306
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 60/113 (53%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C V+C+ K L VP +P +TT L L+ N I +P F +L+++ L
Sbjct: 23 ACPSRCSCGGTTVNCQSKSLTSVPSGIPSSTTILYLDDNKIQSIPSGVFDKLTQLKQLWL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
N++ + F L SLT L L+NN L LPDGVF +L L L + N F
Sbjct: 83 ENNKLQSLPDGVFDKLTSLTHLDLHNNKLQSLPDGVFDKLTSLTHLGLQNNKF 135
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 45/113 (39%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C V+C+ K L VP +P +TT L +D + S S F + T
Sbjct: 23 ACPSRCSCGGTTVNCQSKSLTSVPSGIPSSTTIL-------YLDDNKIQSIPSGVFDKLT 75
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ LE N + LP F L + L N + LP F L +
Sbjct: 76 QLKQLWLENNKLQSLPDGVFDKLTSLTHLDLHNNKLQSLPDGVFDKLTSLTHL 128
>gi|62204537|gb|AAH93131.1| Slit3 protein [Danio rerio]
Length = 176
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 61/116 (52%)
Query: 93 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRR 152
A CPH C C+ VDC+ + VP +P L L++N+IT + F+ K LR
Sbjct: 20 AVNGCPHKCSCSGSHVDCQGQAFKTVPRGIPRNAERLDLDRNNITRITKVDFSGLKNLRV 79
Query: 153 IDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L NQIS + AF+GLK L + LN N L LP+ +F +L L +SEN
Sbjct: 80 LHLENNQISVIERGAFEGLKQLERIRLNRNRLQVLPELLFQSTTKLSRLDLSENQI 135
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 10/117 (8%)
Query: 291 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTY-MVSIDRVDKVLLYSYISNNF 349
A CPH C C+ VDC+ + VP +P L +I R+ KV +F
Sbjct: 20 AVNGCPHKCSCSGSHVDCQGQAFKTVPRGIPRNAERLDLDRNNITRITKV--------DF 71
Query: 350 KRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R LE N I+ + AF K+L RIRL +N + LP F + +L R+
Sbjct: 72 SGLKNLRVLHLENNQISVIERGAFEGLKQLERIRLNRNRLQVLPELLFQSTTKLSRL 128
>gi|320165720|gb|EFW42619.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 664
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 134/334 (40%), Gaps = 46/334 (13%)
Query: 89 GECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYK 148
+ A C C+ V+C K L +P +P TT L L+ N IT + AF++
Sbjct: 24 AQAAVACGTGAVCTCSGTTVNCNGKYLTTIPTGIPVTTTILYLQNNQITSISANAFSSLT 83
Query: 149 RLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
L + LS N I+ +A AF GL L +L L NN +T +P F+ L +L TL + N
Sbjct: 84 LLTYLSLSSNPITNIASSAFSGLSVLNTLDLTNNQITTVPANAFSGLSKLNTLYLYNN-- 141
Query: 209 ICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN--ILDIPEHEFKCSGSSMETRSKIY 266
WL P +T A + + N I +P F +G + +Y
Sbjct: 142 -----------WLSAIPS-SAFTGLTALTQLLLHNNQITTVPSSAF--TGLTALQLLYLY 187
Query: 267 REECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPIL------- 319
+ +T ++ +G A + + I GL+K+ L
Sbjct: 188 NNQIAT-------VAIDAFSGLTALVQLYLYNNQITS-ISANAFSGLSKLNTLQLNNNWL 239
Query: 320 --LPEATTELTYMVSIDRVDKVLLY-----SYISNNFKRWTN-RSRRLEQNDITELPPKA 371
+P + + + ++LLY + S+ F T + L N I + A
Sbjct: 240 SAIPSSA-----FTGLTALTQLLLYNNQITTVPSSAFTGLTALQFLYLYNNQIATVAINA 294
Query: 372 FANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
F+ L ++RL+ N IT +P AF+ +L +
Sbjct: 295 FSGLTALVQLRLDTNQITTVPANAFSGLSKLNTL 328
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 101/447 (22%), Positives = 161/447 (36%), Gaps = 110/447 (24%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L NN +T +P F+ L +L TL + N WL P +T A +
Sbjct: 114 LTNNQITTVPANAFSGLSKLNTLYLYNN-------------WLSAIPS-SAFTGLTALTQ 159
Query: 65 IKGQN--ILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCRE---------- 112
+ N I +P F TG A + + + A +D
Sbjct: 160 LLLHNNQITTVPSSAF---------TGLTALQLLYLYNNQIATVAIDAFSGLTALVQLYL 210
Query: 113 -------------KGLNKVPIL---------LPE-------ATTELRLEQNDITELPPKA 143
GL+K+ L +P A T+L L N IT +P A
Sbjct: 211 YNNQITSISANAFSGLSKLNTLQLNNNWLSAIPSSAFTGLTALTQLLLYNNQITTVPSSA 270
Query: 144 FANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRI 203
F L+ + L NQI+ VA++AF GL +L L L+ N +T +P F+ L +L TL +
Sbjct: 271 FTGLTALQFLYLYNNQIATVAINAFSGLTALVQLRLDTNQITTVPANAFSGLSKLNTLHL 330
Query: 204 SENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK--GQNILDIPEHEFKCSGSSMET 261
N WL P +T A + ++ I +P + F SG +
Sbjct: 331 YNN-------------WLSAIPS-SAFTGLTALTQLRLDTNQITTVPANAF--SGLTALI 374
Query: 262 RSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL--NKVPIL 319
+Y + +T P G+ + L N++ +
Sbjct: 375 YLYLYNNQITTV------------------------PANAFSGLTALVQLYLYNNQITTI 410
Query: 320 LPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRS-RRLEQNDITELPPKAFANYKRL 378
A T L+ + + + + S +N F T + RL N IT + AF +L
Sbjct: 411 PSSALTGLSALTQLYLYNNQ-ITSVPANGFSGLTALTDLRLFNNTITSILANAFTGLTKL 469
Query: 379 RRIRLEQNDITELPPKAFANYKRLRRM 405
+ L N +T +P AF+ L ++
Sbjct: 470 TYLDLSLNQLTSIPAGAFSGLTALTQL 496
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 91/414 (21%), Positives = 147/414 (35%), Gaps = 92/414 (22%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N +T +P F+ L +L TL + N WL P +T A +
Sbjct: 306 LDTNQITTVPANAFSGLSKLNTLHLYNN-------------WLSAIPS-SAFTGLTALTQ 351
Query: 65 IK--GQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL-NKVPIL 121
++ I +P + F SG P G+ + L N
Sbjct: 352 LRLDTNQITTVPANAF--SGLTALIYLYLYNNQITTVPANAFSGLTALVQLYLYNNQITT 409
Query: 122 LPE-------ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSL 174
+P A T+L L N IT +P F+ L + L N I+ + +AF GL L
Sbjct: 410 IPSSALTGLSALTQLYLYNNQITSVPANGFSGLTALTDLRLFNNTITSILANAFTGLTKL 469
Query: 175 TSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCF 234
T L L+ N LT +P G F+ L L L + N WL P +T
Sbjct: 470 TYLDLSLNQLTSIPAGAFSGLTALTQLLLYNN-------------WLSAVPS-SAFTGLT 515
Query: 235 APSHIKGQN--ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAE 292
A ++ N I + + F +G + + ++Y + +T
Sbjct: 516 ALLYLYLYNNQITTVAANAF--TGLTALVQLQLYGNQITT-------------------- 553
Query: 293 PSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRW 352
I G++ + L Y+ S +R+ + + N F
Sbjct: 554 ------------ISASAFAGMSSLVQL---------YLYS-NRITAIFV-----NAFTGL 586
Query: 353 TNRS-RRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
T+ S L N IT LP AF+ + ++ L N ++ +P AF L+ +
Sbjct: 587 THLSLLELSNNQITSLPANAFSGLTAMTQLSLYNNSLSAVPSSAFTGLTALQAL 640
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 99/282 (35%), Gaps = 60/282 (21%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
A T+LRL N IT + AF +L +DLS NQ++ + AF GL +LT L L NN
Sbjct: 443 TALTDLRLFNNTITSILANAFTGLTKLTYLDLSLNQLTSIPAGAFSGLTALTQLLLYNNW 502
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
L+ +P F L L L + N ++ L +L LY G
Sbjct: 503 LSAVPSSAFTGLTALLYLYLYNNQITTVAANAF--TGLTALVQLQLY----------GNQ 550
Query: 244 ILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCAD 303
I I F +G S + +Y + F V TG H
Sbjct: 551 ITTISASAF--AGMSSLVQLYLYSNRITAIF-------VNAFTG-------LTH------ 588
Query: 304 GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQND 363
+ E N++ L A + LT M + L N
Sbjct: 589 --LSLLELSNNQITSLPANAFSGLTAMTQLS------------------------LYNNS 622
Query: 364 ITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ +P AF L+ + L N IT + AF L +
Sbjct: 623 LSAVPSSAFTGLTALQALLLYNNQITSVAANAFTGLTALVLL 664
>gi|78100578|gb|ABB21111.1| variable lymphocyte receptor A [Eptatretus stoutii]
Length = 346
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 101 CRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKN 158
C C D VDC KGL +P +P TTELRL N +++L PKAF + +L + L +N
Sbjct: 34 CTCNDNTKSVDCSSKGLTAIPSNIPVETTELRLNFNSLSKLSPKAFHHLSKLTYLSLGEN 93
Query: 159 QISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
Q+ + F L LT LTL+ N L LP GVF +L L+TL ++ N
Sbjct: 94 QLKSLPQGIFDKLTKLTDLTLSENKLQSLPHGVFDKLTELKTLYLNNNQL 143
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 69/144 (47%), Gaps = 6/144 (4%)
Query: 112 EKGLNKVPILLPEATTELR---LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAF 168
E L +P + + TEL+ L N + LP F +L R+DL NQ+ ++ F
Sbjct: 116 ENKLQSLPHGVFDKLTELKTLYLNNNQLQRLPEGVFDKLTKLTRLDLDYNQLQRLPEGVF 175
Query: 169 QGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HLSWLHRWLKRYPRL 227
L LT L LN N L +P+G F L L + +++N + C C + +L W++ +
Sbjct: 176 DNLAKLTRLELNINQLRRVPEGAFDFLSSLSDVTLNDNPWDCSCRDILYLSNWIRE--KE 233
Query: 228 GLYTKCFAPSHIKGQNILDIPEHE 251
G + + + + +LD+ E E
Sbjct: 234 GKVNGIESATCVNKKAVLDVTEEE 257
Score = 41.2 bits (95), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 42/109 (38%), Gaps = 32/109 (29%)
Query: 299 CRCADGI--VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRS 356
C C D VDC KGL +P +P TTEL
Sbjct: 34 CTCNDNTKSVDCSSKGLTAIPSNIPVETTEL----------------------------- 64
Query: 357 RRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
RL N +++L PKAF + +L + L +N + LP F +L +
Sbjct: 65 -RLNFNSLSKLSPKAFHHLSKLTYLSLGENQLKSLPQGIFDKLTKLTDL 112
>gi|410225854|gb|JAA10146.1| G protein-coupled receptor 124 [Pan troglodytes]
gi|410262648|gb|JAA19290.1| G protein-coupled receptor 124 [Pan troglodytes]
gi|410352923|gb|JAA43065.1| G protein-coupled receptor 124 [Pan troglodytes]
Length = 1338
Score = 83.2 bits (204), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 1/131 (0%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L L N I+ + P AF L+R+DLS N+I + + FQGL L L ++ N + L
Sbjct: 112 KLDLRNNIISTVQPGAFLGLGELKRLDLSNNRIGCLTSETFQGLPRLLRLNISGNIFSSL 171
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTKCFAPSHIKGQNILD 246
GVF EL L+ + + CDCHL WL W + R +L +T C PS + Q +
Sbjct: 172 QPGVFDELPALKVVDLGTEFLTCDCHLRWLLPWAQNRSLQLSEHTLCAYPSALHAQALGS 231
Query: 247 IPEHEFKCSGS 257
+ E + C G+
Sbjct: 232 LQEAQLCCEGA 242
Score = 51.2 bits (121), Expect = 9e-04, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 1 MPRTL----NNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGL 55
+PR L + N + L GVF EL L+ + + CDCHL WL W + R +L
Sbjct: 155 LPRLLRLNISGNIFSSLQPGVFDELPALKVVDLGTEFLTCDCHLRWLLPWAQNRSLQLSE 214
Query: 56 YTKCFAPSHIKGQNILDIPEHEFKCSGPVE 85
+T C PS + Q + + E + C G +E
Sbjct: 215 HTLCAYPSALHAQALGSLQEAQLCCEGALE 244
>gi|395516448|ref|XP_003762401.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 1 [Sarcophilus harrisii]
Length = 1015
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Query: 128 ELRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL 184
EL L N+I+ E AF L ++ L N+I VA AF GL+ L L L N +
Sbjct: 228 ELDLNHNEISGTIEDTSGAFTGLDSLNKLTLFGNKIKSVAKRAFSGLEGLEHLNLGENAI 287
Query: 185 TYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAPSHIKGQN 243
+ FA++ L+ L I+ +SF+CDC L W+ +WL R + + C P +KGQ+
Sbjct: 288 RSIQFDAFAKMKNLKELHINSDSFLCDCQLKWVPQWLMGRGLQAMVVATCAHPESLKGQS 347
Query: 244 ILDIPEHEFKC 254
I +P F C
Sbjct: 348 IFSVPPESFVC 358
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAPS 63
L N + + FA++ L+ L I+ +SF+CDC L W+ +WL R + + C P
Sbjct: 282 LGENAIRSIQFDAFAKMKNLKELHINSDSFLCDCQLKWVPQWLMGRGLQAMVVATCAHPE 341
Query: 64 HIKGQNILDIPEHEFKC 80
+KGQ+I +P F C
Sbjct: 342 SLKGQSIFSVPPESFVC 358
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 133 QNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
+N IT+LP KAF RL +++L++N+I + FQGL +L L L NN++ L DG F
Sbjct: 114 KNRITQLPVKAF-KLPRLTQLELNRNRIRLIEGLTFQGLDNLDVLKLQRNNISKLTDGAF 172
Query: 193 AELFRLRTLRISENSF 208
L +++ L + NS
Sbjct: 173 WGLSKMQVLHLEYNSL 188
>gi|119926499|dbj|BAF43274.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 176
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 65/129 (50%), Gaps = 1/129 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C V+C + L VP +P L L+ N IT+L P F + +L R+DL
Sbjct: 11 ACPARCSCQGTAVNCDRRSLASVPAGIPTTAQSLSLQVNQITKLEPGVFDSLTQLTRLDL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
+NQ+S + V F L LT L LN N L +P G F L L + + N + C C +
Sbjct: 71 ERNQLSALPVGLFDKLTQLTHLGLNTNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACTDI 130
Query: 215 SWLHRWLKR 223
+L W+ +
Sbjct: 131 LYLSTWIGQ 139
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C V+C + L VP +P TT + + ++++ K+ F T
Sbjct: 11 ACPARCSCQGTAVNCDRRSLASVPAGIP--TTAQSLSLQVNQITKLE-----PGVFDSLT 63
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+R LE+N ++ LP F +L + L N + +P AF N K L +
Sbjct: 64 QLTRLDLERNQLSALPVGLFDKLTQLTHLGLNTNQLKSIPRGAFDNLKSLTHI 116
>gi|148235993|ref|NP_001082850.1| leucine rich repeat and Ig domain containing 4b precursor [Danio
rerio]
Length = 604
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 68/121 (56%), Gaps = 2/121 (1%)
Query: 92 AAEPSCPHPCRCA-DGI-VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKR 149
AA+ CP C C+ D + V+C + L VP LP L L N + L + F++ +
Sbjct: 24 AADLPCPQRCSCSRDPLEVNCSSRHLTAVPEGLPTNAKRLDLSGNQLKTLARRQFSSLSK 83
Query: 150 LRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFI 209
L +DLS+N IS + V+ FQGLK+L L + NN L LP GVF+ L LR L ISEN +
Sbjct: 84 LEDLDLSENIISMIEVETFQGLKNLRYLRIKNNRLKILPVGVFSGLSNLRRLDISENEIL 143
Query: 210 C 210
Sbjct: 144 V 144
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 5/138 (3%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N IT + + RL+ + L + ++ AF+GL L +++N L+ L
Sbjct: 279 LDLSYNPITSIQGNLLGDLLRLQELHLVGGNLLRIEPGAFRGLSRFRLLNVSSNRLSTLE 338
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
+ F + L+TLR+ N CDC L W+ R +R G C +P + + + D
Sbjct: 339 ESAFHSVGNLQTLRLDRNPLACDCRLLWVMRRRRRLDFDGRQPTC-SPLNHQRKAFRDFS 397
Query: 249 EHE----FKCSGSSMETR 262
E E F C + + R
Sbjct: 398 EAELPVVFTCRQAQILNR 415
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L +ND+ + +AF + L+ +++ ++ ++ + +A L+SLT L L ++ L
Sbjct: 158 QLDAGENDLVFISQRAFVGLQALKELNVDRSNLTSIPTEALSQLQSLTKLRLRKLTISVL 217
Query: 188 PDGVFAELFRLRTLRI 203
P+ F L +LRTL+I
Sbjct: 218 PNNAFRRLHQLRTLQI 233
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 29/105 (27%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQI------------------------SKVA 164
LR++ N + LP F+ LRR+D+S+N+I ++
Sbjct: 111 LRIKNNRLKILPVGVFSGLSNLRRLDISENEILVFLDYTFRDMINLQQLDAGENDLVFIS 170
Query: 165 VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL-----FRLRTLRIS 204
AF GL++L L ++ +NLT +P ++L RLR L IS
Sbjct: 171 QRAFVGLQALKELNVDRSNLTSIPTEALSQLQSLTKLRLRKLTIS 215
>gi|50086841|gb|AAT70301.1| variable lymphocyte receptor [Petromyzon marinus]
Length = 187
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 87/185 (47%), Gaps = 18/185 (9%)
Query: 93 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRR 152
+ +CP C C+ VDC + L VP +P T L L N +T+L P F + +L
Sbjct: 6 SAAACPSQCSCSRTTVDCNSRSLASVPAAIPITTQRLWLSNNQLTKLDPGVFDSLTQLTY 65
Query: 153 IDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF---- 208
++L+ NQ++ + V F L +L L LN+N L+ LP GVF +L +L L + N
Sbjct: 66 LNLAVNQLTALPVGVFDRLVNLQKLWLNSNQLSALPVGVFDKLTQLTYLGLYVNQLKSIP 125
Query: 209 --ICDCHLSWLHRWLKRYP-----RLGLYTKCFAPSHIKGQNILDIPEH----EFKCSGS 257
+ D S H WL P LY K + H +I+++ H KCSG+
Sbjct: 126 RGVFDNLKSLTHIWLYDNPWDCECSDILYLKNWIVQH---ASIVNLEGHGGVDNVKCSGT 182
Query: 258 SMETR 262
+ R
Sbjct: 183 NTPVR 187
Score = 44.3 bits (103), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 56/139 (40%), Gaps = 30/139 (21%)
Query: 291 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEAT---------------------TELTY 329
+ +CP C C+ VDC + L VP +P T T+LTY
Sbjct: 6 SAAACPSQCSCSRTTVDCNSRSLASVPAAIPITTQRLWLSNNQLTKLDPGVFDSLTQLTY 65
Query: 330 M-VSIDRVDK--VLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQN 386
+ ++++++ V ++ + N K W L N ++ LP F +L + L N
Sbjct: 66 LNLAVNQLTALPVGVFDRLVNLQKLW------LNSNQLSALPVGVFDKLTQLTYLGLYVN 119
Query: 387 DITELPPKAFANYKRLRRM 405
+ +P F N K L +
Sbjct: 120 QLKSIPRGVFDNLKSLTHI 138
>gi|50086871|gb|AAT70316.1| variable lymphocyte receptor [Petromyzon marinus]
Length = 273
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 67/133 (50%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC K L VP +P T L L IT+L P F + L+++ L
Sbjct: 21 ACPSQCSCSGTTVDCSGKSLASVPAGIPITTQSLSLHYTQITKLEPGVFDSLVNLQQLYL 80
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ+S + F L LT + L+ N L +P G F L L + + +N + C C +
Sbjct: 81 GGNQLSALPDGVFDKLTQLTHIVLSTNQLRSVPRGAFDNLKSLTHIWLFDNPWDCACSDI 140
Query: 215 SWLHRWLKRYPRL 227
+L RW+ ++P +
Sbjct: 141 LYLSRWISQHPGV 153
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELT-YMVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ VDC K L VP +P T L+ + I +++ + S + N ++
Sbjct: 21 ACPSQCSCSGTTVDCSGKSLASVPAGIPITTQSLSLHYTQITKLEPGVFDSLV--NLQQ- 77
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N ++ LP F +L I L N + +P AF N K L +
Sbjct: 78 ----LYLGGNQLSALPDGVFDKLTQLTHIVLSTNQLRSVPRGAFDNLKSLTHI 126
>gi|260811233|ref|XP_002600327.1| hypothetical protein BRAFLDRAFT_185044 [Branchiostoma floridae]
gi|229285613|gb|EEN56339.1| hypothetical protein BRAFLDRAFT_185044 [Branchiostoma floridae]
Length = 416
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 66/143 (46%), Gaps = 20/143 (13%)
Query: 96 SCPHPCRCADG--IVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRI 153
SCP CRC+ VDC +GL KVP +P L N+IT L F + ++L +
Sbjct: 21 SCPRVCRCSGSHFYVDCGNRGLTKVPKFVPYVVQSFTLPNNNITRLVVDQFVSLQQLEIL 80
Query: 154 DLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH 213
LS N IS++ AF L SL +L L+NN LT +P F L LR L
Sbjct: 81 QLSDNIISEIDDGAFNNLTSLETLELHNNRLTSVPSAAFTSLVGLREL------------ 128
Query: 214 LSWLHRWLKRYPRLGLYTKCFAP 236
W+ R P + L FAP
Sbjct: 129 ------WIGRNPIITLQANAFAP 145
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 109/258 (42%), Gaps = 36/258 (13%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+NN LT +P F L LR L W+ R P + L FAP
Sbjct: 106 LHNNRLTSVPSAAFTSLVGLREL------------------WIGRNPIITLQANAFAP-- 145
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
++ LD+ + G ++ + + A + R ++ L VP L
Sbjct: 146 LQRLRFLDLGQL-----GRLQTVSKDAFAGLT-----RLV--YLNMAMSNLKSVPYLQYL 193
Query: 125 ATTE-LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+ E L L N I L F N LRR+ L + + + ++F L + L L+ NN
Sbjct: 194 TSLEDLDLSGNYIEVLRTDDFLNLTTLRRLALVLSSVKTIQKNSFNDLSKVQELDLSYNN 253
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPR---LGLYTKCFAPSHIK 240
LT LP + L+ LR + +SEN + C C LSWL WL + + + C P ++
Sbjct: 254 LTTLPPELTYPLYSLRKIDLSENPWNCTCELSWLVNWLGVHVQNRTVDSIGTCDTPVILQ 313
Query: 241 GQNILDIPEHEFKCSGSS 258
++++ ++ +C G +
Sbjct: 314 DTALVNLQQYMLQCPGGN 331
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 56/130 (43%), Gaps = 20/130 (15%)
Query: 294 SCPHPCRCADG--IVDCREKGLNKVPILLPEATTELTY------------MVSIDRVDKV 339
SCP CRC+ VDC +GL KVP +P T VS+ +++ +
Sbjct: 21 SCPRVCRCSGSHFYVDCGNRGLTKVPKFVPYVVQSFTLPNNNITRLVVDQFVSLQQLEIL 80
Query: 340 LLYSYI-----SNNFKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPP 393
L I F T+ + L N +T +P AF + LR + + +N I L
Sbjct: 81 QLSDNIISEIDDGAFNNLTSLETLELHNNRLTSVPSAAFTSLVGLRELWIGRNPIITLQA 140
Query: 394 KAFANYKRLR 403
AFA +RLR
Sbjct: 141 NAFAPLQRLR 150
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPR---LGLYTKCFA 61
L+ NNLT LP + L+ LR + +SEN + C C LSWL WL + + + C
Sbjct: 249 LSYNNLTTLPPELTYPLYSLRKIDLSENPWNCTCELSWLVNWLGVHVQNRTVDSIGTCDT 308
Query: 62 PSHIKGQNILDIPEHEFKCSGP------VEKPTGECAA 93
P ++ ++++ ++ +C G +E P G+ A+
Sbjct: 309 PVILQDTALVNLQQYMLQCPGGNETNPRLEVPEGDSAS 346
>gi|7739737|gb|AAF68989.1|AF257182_1 G-protein-coupled receptor 48 [Homo sapiens]
Length = 951
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 87 PTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFA 145
P+G AA P C PC C D VDC KGL VP L T L + N+IT+LP AF
Sbjct: 21 PSG--AAPPLCAAPCSCDGDRRVDCSGKGLTAVPEGLSAFTQALDISMNNITQLPEDAFK 78
Query: 146 NYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISE 205
N+ L + L+ N +S + A GLK L LTL NN L +P L L++LR+
Sbjct: 79 NFPFLEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDA 138
Query: 206 N 206
N
Sbjct: 139 N 139
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 52/122 (42%), Gaps = 33/122 (27%)
Query: 285 PTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYS 343
P+G AA P C PC C D VDC KGL VP E + T + I
Sbjct: 21 PSG--AAPPLCAAPCSCDGDRRVDCSGKGLTAVP----EGLSAFTQALDI---------- 64
Query: 344 YISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLR 403
N+IT+LP AF N+ L ++L ND++ + PKA + K L+
Sbjct: 65 ----------------SMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLKELK 108
Query: 404 RM 405
+
Sbjct: 109 VL 110
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 66/150 (44%), Gaps = 10/150 (6%)
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADG-----IVDCREKGLNKVP 119
I NI +PE FK + P + + S HP + G ++ + L VP
Sbjct: 64 ISMNNITQLPEDAFK-NFPFLEELQLAGNDLSFIHP-KALSGLKELKVLTLQNNQLKTVP 121
Query: 120 ---ILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
I A LRL+ N IT +P +F +LR + L N +++V V L +L +
Sbjct: 122 SEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQA 181
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
LTL N ++ +PD F L L L + N
Sbjct: 182 LTLALNKISSIPDFAFTNLSSLVVLHLHNN 211
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 88/207 (42%), Gaps = 36/207 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
++ NN+T LP+ F L L+++ N LS++H P+ A S
Sbjct: 64 ISMNNITQLPEDAFKNFPFLEELQLAGND------LSFIH------PK--------ALSG 103
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+K +L + ++ K + P E G A + + + VP E
Sbjct: 104 LKELKVLTLQNNQLK-TVPSEAIRGLSALQS------------LRLDANHITSVPEDSFE 150
Query: 125 ATTELR---LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
+LR L+ N +TE+P +N L+ + L+ N+IS + AF L SL L L+N
Sbjct: 151 GLVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHN 210
Query: 182 NNLTYLPDGVFAELFRLRTLRISENSF 208
N + L F L L TL +S N+
Sbjct: 211 NKIRGLSQHCFDGLDNLETLDLSYNNL 237
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
A E+ L++N I ++ F LR +DLS+N I ++ AF L +T+L ++ N
Sbjct: 365 HALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIHSRAFATLGPITNLDVSFNE 424
Query: 184 LTYLP 188
LT P
Sbjct: 425 LTSFP 429
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N+I +LP +F L I L +NQI ++ FQGL SL L L+ N + +
Sbjct: 348 LDLSYNNIRDLP--SFNGCHALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIH 405
Query: 189 DGVFAELFRLRTLRISEN 206
FA L + L +S N
Sbjct: 406 SRAFATLGPITNLDVSFN 423
>gi|213627601|gb|AAI71652.1| Hypothetical LOC559074 [Danio rerio]
Length = 604
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 68/121 (56%), Gaps = 2/121 (1%)
Query: 92 AAEPSCPHPCRCA-DGI-VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKR 149
AA+ CP C C+ D + V+C + L VP LP L L N + L + F++ +
Sbjct: 24 AADLPCPQRCSCSRDPLEVNCSSRHLTAVPEGLPTNAKRLDLSGNQLKTLARRQFSSLSK 83
Query: 150 LRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFI 209
L +DLS+N IS + V+ FQGLK+L L + NN L LP GVF+ L LR L ISEN +
Sbjct: 84 LEDLDLSENIISMIEVETFQGLKNLRYLRIKNNRLKILPVGVFSGLSNLRRLDISENEIL 143
Query: 210 C 210
Sbjct: 144 V 144
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 5/138 (3%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N IT + + RL+ + L + ++ AF+GL L +++N L+ L
Sbjct: 279 LDLSYNPITSIQGNLLGDLLRLQELHLVGGNLLQIEPGAFRGLSRFRLLNVSSNRLSTLE 338
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
+ F + L+TLR+ N CDC L W+ R +R G C +P + + + D
Sbjct: 339 ESAFHSVGNLQTLRLDRNPLACDCRLLWVMRRRRRLDFDGRQPTC-SPLNHQRKAFRDFS 397
Query: 249 EHE----FKCSGSSMETR 262
E E F C + + R
Sbjct: 398 EAELPVVFTCRQAQILNR 415
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L +ND+ + +AF + L+ +++ ++ ++ + +A L+SLT L L ++ L
Sbjct: 158 QLDAGENDLVFISQRAFVGLQALKELNVDRSNLTSIPTEALSQLQSLTKLRLRKLTISVL 217
Query: 188 PDGVFAELFRLRTLRI 203
P+ F L +LRTL+I
Sbjct: 218 PNNAFRRLHQLRTLQI 233
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 29/105 (27%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQI------------------------SKVA 164
LR++ N + LP F+ LRR+D+S+N+I ++
Sbjct: 111 LRIKNNRLKILPVGVFSGLSNLRRLDISENEILVFLDYTFRDMINLQQLDAGENDLVFIS 170
Query: 165 VDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL-----FRLRTLRIS 204
AF GL++L L ++ +NLT +P ++L RLR L IS
Sbjct: 171 QRAFVGLQALKELNVDRSNLTSIPTEALSQLQSLTKLRLRKLTIS 215
>gi|119926511|dbj|BAF43280.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 179
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ + C K L VP+ +P L L N IT+L P F + L+++ L
Sbjct: 11 ACPARCSCSATQMLCSGKSLASVPMGIPSTMQYLDLNSNQITKLEPGVFDHLANLQQLYL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ+S + V F L LT L LN N L +P G F L L + + +N + C C +
Sbjct: 71 GGNQLSALPVGVFDKLTQLTHLGLNVNQLKSVPRGAFDNLKSLTHIWLHDNPWDCACSDI 130
Query: 215 SWLHRWLKRYPRL 227
+L RW+ ++P +
Sbjct: 131 LYLSRWISQHPGV 143
>gi|410299114|gb|JAA28157.1| leucine-rich repeat containing G protein-coupled receptor 4 [Pan
troglodytes]
Length = 951
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 87 PTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFA 145
P+G AA P C PC C D VDC KGL VP L T L + N+IT+LP AF
Sbjct: 21 PSG--AAPPLCAAPCSCDGDRRVDCSGKGLTAVPEGLSAFTQALDISMNNITQLPEDAFK 78
Query: 146 NYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISE 205
N+ L + L+ N +S + A GLK L LTL NN L +P L L++LR+
Sbjct: 79 NFPFLEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDA 138
Query: 206 N 206
N
Sbjct: 139 N 139
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 52/122 (42%), Gaps = 33/122 (27%)
Query: 285 PTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYS 343
P+G AA P C PC C D VDC KGL VP E + T + I
Sbjct: 21 PSG--AAPPLCAAPCSCDGDRRVDCSGKGLTAVP----EGLSAFTQALDI---------- 64
Query: 344 YISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLR 403
N+IT+LP AF N+ L ++L ND++ + PKA + K L+
Sbjct: 65 ----------------SMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLKELK 108
Query: 404 RM 405
+
Sbjct: 109 VL 110
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 66/150 (44%), Gaps = 10/150 (6%)
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADG-----IVDCREKGLNKVP 119
I NI +PE FK + P + + S HP + G ++ + L VP
Sbjct: 64 ISMNNITQLPEDAFK-NFPFLEELQLAGNDLSFIHP-KALSGLKELKVLTLQNNQLKTVP 121
Query: 120 ---ILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
I A LRL+ N IT +P +F +LR + L N +++V V L +L +
Sbjct: 122 SEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQA 181
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
LTL N ++ +PD F L L L + N
Sbjct: 182 LTLALNKISSIPDFAFTNLSSLVVLHLHNN 211
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 92/219 (42%), Gaps = 39/219 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
++ NN+T LP+ F L L+++ N LS++H P+ A S
Sbjct: 64 ISMNNITQLPEDAFKNFPFLEELQLAGND------LSFIH------PK--------ALSG 103
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECA-------AEPSCPHPCRCADGIVDCR-----E 112
+K +L + ++ K + P E G A A P +G+V R +
Sbjct: 104 LKELKVLTLQNNQLK-TVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDD 162
Query: 113 KGLNKVPIL----LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAF 168
L +VP+ LP L L N I+ +P AF N L + L N+I ++ F
Sbjct: 163 NSLTEVPVHPLSNLP-TLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCF 221
Query: 169 QGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENS 207
GL +L +L LN NNL P + A L L+ L NS
Sbjct: 222 DGLDNLETLDLNYNNLGEFPQAIKA-LPSLKELGFHSNS 259
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
A E+ L++N I ++ F LR +DLS+N I ++ AF L +T+L ++ N
Sbjct: 365 HALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIHSRAFATLGPITNLDVSFNE 424
Query: 184 LTYLP 188
LT P
Sbjct: 425 LTSFP 429
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N+I +LP +F L I L +NQI ++ FQGL SL L L+ N + +
Sbjct: 348 LDLSYNNIRDLP--SFNGCHALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIH 405
Query: 189 DGVFAELFRLRTLRISEN 206
FA L + L +S N
Sbjct: 406 SRAFATLGPITNLDVSFN 423
>gi|410215450|gb|JAA04944.1| leucine-rich repeat containing G protein-coupled receptor 4 [Pan
troglodytes]
Length = 951
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 87 PTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFA 145
P+G AA P C PC C D VDC KGL VP L T L + N+IT+LP AF
Sbjct: 21 PSG--AAPPLCAAPCSCDGDRRVDCSGKGLTAVPEGLSAFTQALDISMNNITQLPEDAFK 78
Query: 146 NYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISE 205
N+ L + L+ N +S + A GLK L LTL NN L +P L L++LR+
Sbjct: 79 NFPFLEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDA 138
Query: 206 N 206
N
Sbjct: 139 N 139
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 52/122 (42%), Gaps = 33/122 (27%)
Query: 285 PTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYS 343
P+G AA P C PC C D VDC KGL VP E + T + I
Sbjct: 21 PSG--AAPPLCAAPCSCDGDRRVDCSGKGLTAVP----EGLSAFTQALDI---------- 64
Query: 344 YISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLR 403
N+IT+LP AF N+ L ++L ND++ + PKA + K L+
Sbjct: 65 ----------------SMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLKELK 108
Query: 404 RM 405
+
Sbjct: 109 VL 110
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 66/150 (44%), Gaps = 10/150 (6%)
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADG-----IVDCREKGLNKVP 119
I NI +PE FK + P + + S HP + G ++ + L VP
Sbjct: 64 ISMNNITQLPEDAFK-NFPFLEELQLAGNDLSFIHP-KALSGLKELKVLTLQNNQLKTVP 121
Query: 120 ---ILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
I A LRL+ N IT +P +F +LR + L N +++V V L +L +
Sbjct: 122 SEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQA 181
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
LTL N ++ +PD F L L L + N
Sbjct: 182 LTLALNKISSIPDFAFTNLSSLVVLHLHNN 211
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 92/219 (42%), Gaps = 39/219 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
++ NN+T LP+ F L L+++ N LS++H P+ A S
Sbjct: 64 ISMNNITQLPEDAFKNFPFLEELQLAGND------LSFIH------PK--------ALSG 103
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECA-------AEPSCPHPCRCADGIVDCR-----E 112
+K +L + ++ K + P E G A A P +G+V R +
Sbjct: 104 LKELKVLTLQNNQLK-TVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDD 162
Query: 113 KGLNKVPIL----LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAF 168
L +VP+ LP L L N I+ +P AF N L + L N+I ++ F
Sbjct: 163 NSLTEVPVHPLSNLP-TLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCF 221
Query: 169 QGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENS 207
GL +L +L LN NNL P + A L L+ L NS
Sbjct: 222 DGLDNLETLDLNYNNLGEFPQAIKA-LPSLKELGFHSNS 259
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
A E+ L++N I ++ F LR +DLS+N I ++ AF L +T+L ++ N
Sbjct: 365 HALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIHSRAFATLGPITNLDVSFNE 424
Query: 184 LTYLP 188
LT P
Sbjct: 425 LTSFP 429
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N+I +LP +F L I L +NQI ++ FQGL SL L L+ N + +
Sbjct: 348 LDLSYNNIRDLP--SFNGCHALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIH 405
Query: 189 DGVFAELFRLRTLRISEN 206
FA L + L +S N
Sbjct: 406 SRAFATLGPITNLDVSFN 423
>gi|70955672|gb|AAZ16397.1| variable lymphocyte receptor B [Eptatretus stoutii]
Length = 296
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 60/115 (52%)
Query: 94 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRI 153
E +CP C C V+C+ K L VP +P +TT L L N + +P F +L R+
Sbjct: 21 EKACPSRCSCRGTTVNCKSKSLTSVPSGIPSSTTVLDLSPNKLQSIPSGVFDKLTQLTRL 80
Query: 154 DLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
DL +NQ+ + + F L LT L L+ N L LP+GVF +L L L +S N
Sbjct: 81 DLDRNQLKFLPIGIFDKLTKLTHLNLHTNQLQSLPNGVFDKLTSLTYLGLSTNQL 135
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 8/115 (6%)
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
E +CP C C V+C+ K L VP +P +TT L +S ++ L S S F +
Sbjct: 21 EKACPSRCSCRGTTVNCKSKSLTSVPSGIPSSTTVLD--LSPNK-----LQSIPSGVFDK 73
Query: 352 WTNRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
T +R L++N + LP F +L + L N + LP F L +
Sbjct: 74 LTQLTRLDLDRNQLKFLPIGIFDKLTKLTHLNLHTNQLQSLPNGVFDKLTSLTYL 128
>gi|388454428|ref|NP_001252594.1| leucine-rich repeat-containing G-protein coupled receptor 4
precursor [Macaca mulatta]
gi|387540894|gb|AFJ71074.1| leucine-rich repeat-containing G-protein coupled receptor 4
precursor [Macaca mulatta]
Length = 951
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 87 PTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFA 145
P+G AA P C PC C D VDC KGL VP L T L + N+IT+LP AF
Sbjct: 21 PSG--AAPPLCAAPCSCDGDRRVDCSGKGLTAVPEGLSAFTQALDISMNNITQLPEDAFK 78
Query: 146 NYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISE 205
N+ L + L+ N +S + A GLK L LTL NN L +P L L++LR+
Sbjct: 79 NFPFLEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDA 138
Query: 206 N 206
N
Sbjct: 139 N 139
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 52/122 (42%), Gaps = 33/122 (27%)
Query: 285 PTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYS 343
P+G AA P C PC C D VDC KGL VP E + T + I
Sbjct: 21 PSG--AAPPLCAAPCSCDGDRRVDCSGKGLTAVP----EGLSAFTQALDI---------- 64
Query: 344 YISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLR 403
N+IT+LP AF N+ L ++L ND++ + PKA + K L+
Sbjct: 65 ----------------SMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLKELK 108
Query: 404 RM 405
+
Sbjct: 109 VL 110
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 66/150 (44%), Gaps = 10/150 (6%)
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADG-----IVDCREKGLNKVP 119
I NI +PE FK + P + + S HP + G ++ + L VP
Sbjct: 64 ISMNNITQLPEDAFK-NFPFLEELQLAGNDLSFIHP-KALSGLKELKVLTLQNNQLKTVP 121
Query: 120 ---ILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
I A LRL+ N IT +P +F +LR + L N +++V V L +L +
Sbjct: 122 SEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQA 181
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
LTL N ++ +PD F L L L + N
Sbjct: 182 LTLALNKISSIPDFAFTNLSSLVVLHLHNN 211
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 92/219 (42%), Gaps = 39/219 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
++ NN+T LP+ F L L+++ N LS++H P+ A S
Sbjct: 64 ISMNNITQLPEDAFKNFPFLEELQLAGND------LSFIH------PK--------ALSG 103
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECA-------AEPSCPHPCRCADGIVDCR-----E 112
+K +L + ++ K + P E G A A P +G+V R +
Sbjct: 104 LKELKVLTLQNNQLK-TVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDD 162
Query: 113 KGLNKVPIL----LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAF 168
L +VP+ LP L L N I+ +P AF N L + L N+I ++ F
Sbjct: 163 NSLTEVPVHPLSNLP-TLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCF 221
Query: 169 QGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENS 207
GL +L +L LN NNL P + A L L+ L NS
Sbjct: 222 DGLDNLETLDLNYNNLGEFPQAIKA-LPSLKELGFHSNS 259
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
A E+ L++N I ++ F LR +DLS+N I ++ AF L +T+L ++ N
Sbjct: 365 HALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIHSKAFATLGPITNLDVSFNE 424
Query: 184 LTYLP 188
LT P
Sbjct: 425 LTSFP 429
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N+I +LP +F L I L +NQI ++ FQGL SL L L+ N + +
Sbjct: 348 LDLSYNNIRDLP--SFNGCHALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIH 405
Query: 189 DGVFAELFRLRTLRISEN 206
FA L + L +S N
Sbjct: 406 SKAFATLGPITNLDVSFN 423
>gi|384941030|gb|AFI34120.1| leucine-rich repeat-containing G-protein coupled receptor 4
precursor [Macaca mulatta]
Length = 951
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 87 PTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFA 145
P+G AA P C PC C D VDC KGL VP L T L + N+IT+LP AF
Sbjct: 21 PSG--AAPPLCAAPCSCDGDRRVDCSGKGLTAVPEGLSAFTQALDISMNNITQLPEDAFK 78
Query: 146 NYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISE 205
N+ L + L+ N +S + A GLK L LTL NN L +P L L++LR+
Sbjct: 79 NFPFLEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDA 138
Query: 206 N 206
N
Sbjct: 139 N 139
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 52/122 (42%), Gaps = 33/122 (27%)
Query: 285 PTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYS 343
P+G AA P C PC C D VDC KGL VP E + T + I
Sbjct: 21 PSG--AAPPLCAAPCSCDGDRRVDCSGKGLTAVP----EGLSAFTQALDI---------- 64
Query: 344 YISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLR 403
N+IT+LP AF N+ L ++L ND++ + PKA + K L+
Sbjct: 65 ----------------SMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLKELK 108
Query: 404 RM 405
+
Sbjct: 109 VL 110
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 66/150 (44%), Gaps = 10/150 (6%)
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADG-----IVDCREKGLNKVP 119
I NI +PE FK + P + + S HP + G ++ + L VP
Sbjct: 64 ISMNNITQLPEDAFK-NFPFLEELQLAGNDLSFIHP-KALSGLKELKVLTLQNNQLKTVP 121
Query: 120 ---ILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
I A LRL+ N IT +P +F +LR + L N +++V V L +L +
Sbjct: 122 SEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQA 181
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
LTL N ++ +PD F L L L + N
Sbjct: 182 LTLALNKISSIPDFAFTNLSSLVVLHLHNN 211
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 92/219 (42%), Gaps = 39/219 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
++ NN+T LP+ F L L+++ N LS++H P+ A S
Sbjct: 64 ISMNNITQLPEDAFKNFPFLEELQLAGND------LSFIH------PK--------ALSG 103
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECA-------AEPSCPHPCRCADGIVDCR-----E 112
+K +L + ++ K + P E G A A P +G+V R +
Sbjct: 104 LKELKVLTLQNNQLK-TVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDD 162
Query: 113 KGLNKVPIL----LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAF 168
L +VP+ LP L L N I+ +P AF N L + L N+I ++ F
Sbjct: 163 NSLTEVPVHPLSNLP-TLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCF 221
Query: 169 QGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENS 207
GL +L +L LN NNL P + A L L+ L NS
Sbjct: 222 DGLDNLETLDLNYNNLGEFPQAIKA-LPSLKELGFHSNS 259
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
A E+ L++N I ++ F LR +DLS+N I ++ AF L +T+L ++ N
Sbjct: 365 HALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIHSKAFATLGPITNLDVSFNE 424
Query: 184 LTYLP 188
LT P
Sbjct: 425 LTSFP 429
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N+I +LP +F L I L +NQI ++ FQGL SL L L+ N + +
Sbjct: 348 LDLSYNNIRDLP--SFNGCHALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIH 405
Query: 189 DGVFAELFRLRTLRISEN 206
FA L + L +S N
Sbjct: 406 SKAFATLGPITNLDVSFN 423
>gi|351699990|gb|EHB02909.1| Leucine-rich repeats and immunoglobulin-like domains protein 1
[Heterocephalus glaber]
Length = 1011
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 110/259 (42%), Gaps = 20/259 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L NN++ L DG F L ++ L + NS + + + L+ L +L L + H
Sbjct: 162 LQRNNISKLTDGAFWGLSKMHVLHLEYNSLV-EVNSGSLY-GLTALHQLHLSNNAISRIH 219
Query: 65 IKGQNILDIPEHEFKCS-GPVEKPTGECAAEPSCPHPCRCADG----IVDCREKGLNKVP 119
G + HE S + + E AE S R + I + KGL +
Sbjct: 220 RDGWSFCQ-KLHELILSFNNLTRLDEESLAELSILSILRLSHNAISHIAEGAFKGLRNLR 278
Query: 120 ILLPEATTELRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
+L L+ N+I+ E AFA L ++ L N+I VA AF GL+ L
Sbjct: 279 VL--------DLDHNEISGTIEDTSGAFAGLDNLSKLTLFGNKIKSVAKRAFSGLEGLEH 330
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTK-CFA 235
L L N + + F ++ L+ L I+ SF+CDC L WL WL T C
Sbjct: 331 LNLGENAIRSIQLDAFVKMKNLKELHINSESFLCDCQLKWLPPWLVSKTLQAFVTATCAH 390
Query: 236 PSHIKGQNILDIPEHEFKC 254
P +KGQ+I +P F C
Sbjct: 391 PESLKGQSIFSVPPEGFVC 409
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 133 QNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
+N IT+LP KAF RL ++DL++N+I + FQGL SL L L NN++ L DG F
Sbjct: 117 KNRITQLPVKAF-KLPRLTQLDLNRNRIRLIEGLTFQGLDSLEVLKLQRNNISKLTDGAF 175
Query: 193 AELFRLRTLRISENSFI 209
L ++ L + NS +
Sbjct: 176 WGLSKMHVLHLEYNSLV 192
>gi|157694513|ref|NP_060960.2| leucine-rich repeat-containing G-protein coupled receptor 4
precursor [Homo sapiens]
gi|212286375|sp|Q9BXB1.2|LGR4_HUMAN RecName: Full=Leucine-rich repeat-containing G-protein coupled
receptor 4; AltName: Full=G-protein coupled receptor 48;
Flags: Precursor
gi|119588692|gb|EAW68286.1| leucine-rich repeat-containing G protein-coupled receptor 4,
isoform CRA_b [Homo sapiens]
gi|168277824|dbj|BAG10890.1| leucine-rich repeat-containing G-protein coupled receptor 4
precursor [synthetic construct]
Length = 951
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 87 PTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFA 145
P+G AA P C PC C D VDC KGL VP L T L + N+IT+LP AF
Sbjct: 21 PSG--AAPPLCAAPCSCDGDRRVDCSGKGLTAVPEGLSAFTQALDISMNNITQLPEDAFK 78
Query: 146 NYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISE 205
N+ L + L+ N +S + A GLK L LTL NN L +P L L++LR+
Sbjct: 79 NFPFLEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDA 138
Query: 206 N 206
N
Sbjct: 139 N 139
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 52/122 (42%), Gaps = 33/122 (27%)
Query: 285 PTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYS 343
P+G AA P C PC C D VDC KGL VP E + T + I
Sbjct: 21 PSG--AAPPLCAAPCSCDGDRRVDCSGKGLTAVP----EGLSAFTQALDI---------- 64
Query: 344 YISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLR 403
N+IT+LP AF N+ L ++L ND++ + PKA + K L+
Sbjct: 65 ----------------SMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLKELK 108
Query: 404 RM 405
+
Sbjct: 109 VL 110
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 66/150 (44%), Gaps = 10/150 (6%)
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADG-----IVDCREKGLNKVP 119
I NI +PE FK + P + + S HP + G ++ + L VP
Sbjct: 64 ISMNNITQLPEDAFK-NFPFLEELQLAGNDLSFIHP-KALSGLKELKVLTLQNNQLKTVP 121
Query: 120 ---ILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
I A LRL+ N IT +P +F +LR + L N +++V V L +L +
Sbjct: 122 SEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQA 181
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
LTL N ++ +PD F L L L + N
Sbjct: 182 LTLALNKISSIPDFAFTNLSSLVVLHLHNN 211
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 92/219 (42%), Gaps = 39/219 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
++ NN+T LP+ F L L+++ N LS++H P+ A S
Sbjct: 64 ISMNNITQLPEDAFKNFPFLEELQLAGND------LSFIH------PK--------ALSG 103
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECA-------AEPSCPHPCRCADGIVDCR-----E 112
+K +L + ++ K + P E G A A P +G+V R +
Sbjct: 104 LKELKVLTLQNNQLK-TVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDD 162
Query: 113 KGLNKVPIL----LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAF 168
L +VP+ LP L L N I+ +P AF N L + L N+I ++ F
Sbjct: 163 NSLTEVPVHPLSNLP-TLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCF 221
Query: 169 QGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENS 207
GL +L +L LN NNL P + A L L+ L NS
Sbjct: 222 DGLDNLETLDLNYNNLGEFPQAIKA-LPSLKELGFHSNS 259
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
A E+ L++N I ++ F LR +DLS+N I ++ AF L +T+L ++ N
Sbjct: 365 HALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIHSRAFATLGPITNLDVSFNE 424
Query: 184 LTYLP 188
LT P
Sbjct: 425 LTSFP 429
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N+I +LP +F L I L +NQI ++ FQGL SL L L+ N + +
Sbjct: 348 LDLSYNNIRDLP--SFNGCHALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIH 405
Query: 189 DGVFAELFRLRTLRISEN 206
FA L + L +S N
Sbjct: 406 SRAFATLGPITNLDVSFN 423
>gi|124430559|ref|NP_766259.2| leucine-rich repeat-containing G-protein coupled receptor 4
precursor [Mus musculus]
gi|158514044|sp|A2ARI4.1|LGR4_MOUSE RecName: Full=Leucine-rich repeat-containing G-protein coupled
receptor 4; AltName: Full=G-protein coupled receptor 48;
Flags: Precursor
gi|182888009|gb|AAI60293.1| Leucine-rich repeat-containing G protein-coupled receptor 4
[synthetic construct]
Length = 951
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 87 PTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFA 145
P+G AA P C PC C D VDC KGL VP L T L + N+IT+LP AF
Sbjct: 21 PSG--AAPPLCAAPCSCDGDRRVDCSGKGLTAVPEGLSAFTQALDISMNNITQLPEDAFK 78
Query: 146 NYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISE 205
N+ L + L+ N +S + A GLK L LTL NN L +P L L++LR+
Sbjct: 79 NFPFLEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDA 138
Query: 206 N 206
N
Sbjct: 139 N 139
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 52/122 (42%), Gaps = 33/122 (27%)
Query: 285 PTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYS 343
P+G AA P C PC C D VDC KGL VP E + T + I
Sbjct: 21 PSG--AAPPLCAAPCSCDGDRRVDCSGKGLTAVP----EGLSAFTQALDI---------- 64
Query: 344 YISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLR 403
N+IT+LP AF N+ L ++L ND++ + PKA + K L+
Sbjct: 65 ----------------SMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLKELK 108
Query: 404 RM 405
+
Sbjct: 109 VL 110
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 67/150 (44%), Gaps = 10/150 (6%)
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADG-----IVDCREKGLNKVP 119
I NI +PE FK + P + + S HP + G ++ + L VP
Sbjct: 64 ISMNNITQLPEDAFK-NFPFLEELQLAGNDLSFIHP-KALSGLKELKVLTLQNNQLKTVP 121
Query: 120 ---ILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
I A LRL+ N IT +P +F +LR + L N +++V V L +L +
Sbjct: 122 SEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNILTEVPVRPLSNLPTLQA 181
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
LTL NN++ +PD F L L L + N
Sbjct: 182 LTLALNNISSIPDFAFTNLSSLVVLHLHNN 211
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 110/267 (41%), Gaps = 66/267 (24%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
++ NN+T LP+ F L L+++ N LS++H P+ A S
Sbjct: 64 ISMNNITQLPEDAFKNFPFLEELQLAGND------LSFIH------PK--------ALSG 103
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECA-------AEPSCPHPCRCADGIVDCR-----E 112
+K +L + ++ K + P E G A A P +G+V R +
Sbjct: 104 LKELKVLTLQNNQLK-TVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDD 162
Query: 113 KGLNKVPIL----LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAF 168
L +VP+ LP L L N+I+ +P AF N L + L N+I ++ F
Sbjct: 163 NILTEVPVRPLSNLP-TLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCF 221
Query: 169 QGLKSLTSLTLNNNNL-----------------------TYLPDGVFAELFRLRTLRISE 205
GL +L +L LN NNL + +PDG FA LRT+ + +
Sbjct: 222 DGLDNLETLDLNYNNLDEFPQAIKALPSLKELGFHSNSISVIPDGAFAGNPLLRTIHLYD 281
Query: 206 N--SFICDC---HLSWLHRWLKRYPRL 227
N SF+ + +LS LH + R L
Sbjct: 282 NPLSFVGNSAFHNLSDLHSLVIRGASL 308
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L NDI +LP +F + L I L +NQIS + FQGL SL L L+ N + +
Sbjct: 348 LDLSYNDIRDLP--SFNGCRALEEISLQRNQISLIKETTFQGLTSLRILDLSRNLIREIH 405
Query: 189 DGVFAELFRLRTLRISEN 206
G FA+L + L +S N
Sbjct: 406 SGAFAKLGTITNLDVSFN 423
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 84/195 (43%), Gaps = 31/195 (15%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISEN--SFICDC---HLSWLHRWLKRYPRLGLYTKC 59
++N+++ +PDG FA LRT+ + +N SF+ + +LS LH + R L +
Sbjct: 255 FHSNSISVIPDGAFAGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASLVQWFPN 314
Query: 60 FAPS------HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREK 113
A + + G I IP+ C T + + + R CR
Sbjct: 315 LAGTVHLESLTLTGTKISSIPDD--LCQNQKMLRTLDLSY-----NDIRDLPSFNGCR-- 365
Query: 114 GLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKS 173
A E+ L++N I+ + F LR +DLS+N I ++ AF L +
Sbjct: 366 -----------ALEEISLQRNQISLIKETTFQGLTSLRILDLSRNLIREIHSGAFAKLGT 414
Query: 174 LTSLTLNNNNLTYLP 188
+T+L ++ N LT P
Sbjct: 415 ITNLDVSFNELTSFP 429
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 88/233 (37%), Gaps = 46/233 (19%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N++T +P+ F L +LR L + +N + + + R L P L T
Sbjct: 136 LDANHITSVPEDSFEGLVQLRHLWLDDN-ILTEVPV----RPLSNLPTLQALT------- 183
Query: 65 IKGQNILDIPEHEF-KCSGPVEKPTGECAAEPSCPHPCRCADGI-----VDCREKGLNKV 118
+ NI IP+ F S V + H C DG+ +D L++
Sbjct: 184 LALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQH---CFDGLDNLETLDLNYNNLDEF 240
Query: 119 PILLPE--ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSL-- 174
P + + EL N I+ +P AFA LR I L N +S V AF L L
Sbjct: 241 PQAIKALPSLKELGFHSNSISVIPDGAFAGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHS 300
Query: 175 ---------------------TSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
SLTL ++ +PD + LRTL +S N
Sbjct: 301 LVIRGASLVQWFPNLAGTVHLESLTLTGTKISSIPDDLCQNQKMLRTLDLSYN 353
>gi|62089072|dbj|BAD92980.1| Leucine-rich repeat-containing G protein-coupled receptor 4
precursor variant [Homo sapiens]
Length = 1032
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 87 PTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFA 145
P+G AA P C PC C D VDC KGL VP L T L + N+IT+LP AF
Sbjct: 102 PSG--AAPPLCAAPCSCDGDRRVDCSGKGLTAVPEGLSAFTQALDISMNNITQLPEDAFK 159
Query: 146 NYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISE 205
N+ L + L+ N +S + A GLK L LTL NN L +P L L++LR+
Sbjct: 160 NFPFLEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDA 219
Query: 206 N 206
N
Sbjct: 220 N 220
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 52/122 (42%), Gaps = 33/122 (27%)
Query: 285 PTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYS 343
P+G AA P C PC C D VDC KGL VP E + T + I
Sbjct: 102 PSG--AAPPLCAAPCSCDGDRRVDCSGKGLTAVP----EGLSAFTQALDI---------- 145
Query: 344 YISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLR 403
N+IT+LP AF N+ L ++L ND++ + PKA + K L+
Sbjct: 146 ----------------SMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLKELK 189
Query: 404 RM 405
+
Sbjct: 190 VL 191
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 66/150 (44%), Gaps = 10/150 (6%)
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADG-----IVDCREKGLNKVP 119
I NI +PE FK + P + + S HP + G ++ + L VP
Sbjct: 145 ISMNNITQLPEDAFK-NFPFLEELQLAGNDLSFIHP-KALSGLKELKVLTLQNNQLKTVP 202
Query: 120 ---ILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
I A LRL+ N IT +P +F +LR + L N +++V V L +L +
Sbjct: 203 SEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQA 262
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
LTL N ++ +PD F L L L + N
Sbjct: 263 LTLALNKISSIPDFAFTNLSSLVVLHLHNN 292
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 92/219 (42%), Gaps = 39/219 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
++ NN+T LP+ F L L+++ N LS++H P+ A S
Sbjct: 145 ISMNNITQLPEDAFKNFPFLEELQLAGND------LSFIH------PK--------ALSG 184
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECA-------AEPSCPHPCRCADGIVDCR-----E 112
+K +L + ++ K + P E G A A P +G+V R +
Sbjct: 185 LKELKVLTLQNNQLK-TVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDD 243
Query: 113 KGLNKVPIL----LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAF 168
L +VP+ LP L L N I+ +P AF N L + L N+I ++ F
Sbjct: 244 NSLTEVPVHPLSNLP-TLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCF 302
Query: 169 QGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENS 207
GL +L +L LN NNL P + A L L+ L NS
Sbjct: 303 DGLDNLETLDLNYNNLGEFPQAIKA-LPSLKELGFHSNS 340
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
A E+ L++N I ++ F LR +DLS+N I ++ AF L +T+L ++ N
Sbjct: 446 HALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIHSRAFATLGPITNLDVSFNE 505
Query: 184 LTYLP 188
LT P
Sbjct: 506 LTSFP 510
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N+I +LP +F L I L +NQI ++ FQGL SL L L+ N + +
Sbjct: 429 LDLSYNNIRDLP--SFNGCHALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIH 486
Query: 189 DGVFAELFRLRTLRISEN 206
FA L + L +S N
Sbjct: 487 SRAFATLGPITNLDVSFN 504
>gi|13569577|gb|AAK31153.1| G-protein couple receptor [Homo sapiens]
Length = 951
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 87 PTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFA 145
P+G AA P C PC C D VDC KGL VP L T L + N+IT+LP AF
Sbjct: 21 PSG--AAPPLCAAPCSCDGDRRVDCSGKGLTAVPEGLSAFTQALDISMNNITQLPEDAFK 78
Query: 146 NYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISE 205
N+ L + L+ N +S + A GLK L LTL NN L +P L L++LR+
Sbjct: 79 NFPFLEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDA 138
Query: 206 N 206
N
Sbjct: 139 N 139
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 52/122 (42%), Gaps = 33/122 (27%)
Query: 285 PTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYS 343
P+G AA P C PC C D VDC KGL VP E + T + I
Sbjct: 21 PSG--AAPPLCAAPCSCDGDRRVDCSGKGLTAVP----EGLSAFTQALDI---------- 64
Query: 344 YISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLR 403
N+IT+LP AF N+ L ++L ND++ + PKA + K L+
Sbjct: 65 ----------------SMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLKELK 108
Query: 404 RM 405
+
Sbjct: 109 VL 110
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 66/150 (44%), Gaps = 10/150 (6%)
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADG-----IVDCREKGLNKVP 119
I NI +PE FK + P + + S HP + G ++ + L VP
Sbjct: 64 ISMNNITQLPEDAFK-NFPFLEELQLAGNDLSFIHP-KALSGLKELKVLTLQNNQLKTVP 121
Query: 120 ---ILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
I A LRL+ N IT +P +F +LR + L N +++V V L +L +
Sbjct: 122 SEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQA 181
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
LTL N ++ +PD F L L L + N
Sbjct: 182 LTLALNKISSIPDFAFTNLSSLVVLHLHNN 211
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 88/207 (42%), Gaps = 36/207 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
++ NN+T LP+ F L L+++ N LS++H P+ A S
Sbjct: 64 ISMNNITQLPEDAFKNFPFLEELQLAGND------LSFIH------PK--------ALSG 103
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+K +L + ++ K + P E G A + + + VP E
Sbjct: 104 LKELKVLTLQNNQLK-TVPSEAIRGLSALQS------------LRLDANHITSVPEDSFE 150
Query: 125 ATTELR---LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
+LR L+ N +TE+P +N L+ + L+ N+IS + AF L SL L L+N
Sbjct: 151 GLVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHN 210
Query: 182 NNLTYLPDGVFAELFRLRTLRISENSF 208
N + L F L L TL +S N+
Sbjct: 211 NKIRGLSQHCFDGLDNLETLDLSYNNL 237
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
A E+ L++N I ++ F LR +DLS+N I ++ AF L +T+L ++ N
Sbjct: 365 HALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIHSRAFATLGPITNLDVSFNE 424
Query: 184 LTYLP 188
LT P
Sbjct: 425 LTSFP 429
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N+I +LP +F L I L +NQI ++ FQGL SL L L+ N + +
Sbjct: 348 LDLSYNNIRDLP--SFNGCHALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIH 405
Query: 189 DGVFAELFRLRTLRISEN 206
FA L + L +S N
Sbjct: 406 SRAFATLGPITNLDVSFN 423
>gi|449273502|gb|EMC82996.1| putative G-protein coupled receptor 125, partial [Columba livia]
Length = 1209
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 64/124 (51%)
Query: 131 LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDG 190
L+ N I+ + P AF L+R+DL+ N+I + D F+GL +L L L+ N + L G
Sbjct: 2 LKNNLISTIDPGAFLGLSSLKRLDLTNNRIGCLNADIFRGLVNLIRLNLSGNLFSTLTQG 61
Query: 191 VFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEH 250
F L L+ L + +CDC++ W+H+WLK TKC P ++ Q + + +
Sbjct: 62 TFDHLGSLKALEFQTDYLLCDCNILWMHQWLKERNITVRETKCAYPKSLQSQMVTGVKQE 121
Query: 251 EFKC 254
C
Sbjct: 122 LLTC 125
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N + L G F L L+ L + +CDC++ W+H+WLK TKC P
Sbjct: 50 LSGNLFSTLTQGTFDHLGSLKALEFQTDYLLCDCNILWMHQWLKERNITVRETKCAYPKS 109
Query: 65 IKGQNILDIPEHEFKCSGPVEKPT 88
++ Q + + + C P+E P+
Sbjct: 110 LQSQMVTGVKQELLTCEPPLELPS 133
>gi|47209638|emb|CAF93478.1| unnamed protein product [Tetraodon nigroviridis]
Length = 384
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 78/187 (41%), Gaps = 29/187 (15%)
Query: 92 AAEPSCPHPCRCADG----IVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANY 147
A CP C C+D + DC K ++VP + P + L L N I+ + +F
Sbjct: 9 AVASRCPELCACSDKQDRYVADCSSKSFSEVPEVFPADVSTLSLSANGISAVRSGSFLGV 68
Query: 148 KRLRRI----------------------DLSKNQISKVAVDAFQGLKSLTSLTLNNNNLT 185
+L + + N++ + DAF LK L L LNNNN
Sbjct: 69 AQLMTLCHNSIVDFPWGDLQNLTNLQLLKMDHNKMVHLPKDAFSTLKDLRYLRLNNNNFL 128
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL---GLYTKCFAPSHIKGQ 242
+ +G F L + L+IS N F C C L WL W+ + C +P+ +KGQ
Sbjct: 129 TIAEGTFDGLLYMSHLQISGNPFACTCSLDWLRTWISTTSVFVPDQQWIVCDSPAKLKGQ 188
Query: 243 NILDIPE 249
I +P+
Sbjct: 189 MIRRLPK 195
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 44/98 (44%), Gaps = 10/98 (10%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL---GLYTKCFA 61
LNNNN + +G F L + L+IS N F C C L WL W+ + C +
Sbjct: 122 LNNNNFLTIAEGTFDGLLYMSHLQISGNPFACTCSLDWLRTWISTTSVFVPDQQWIVCDS 181
Query: 62 PSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPH 99
P+ +KGQ I +P+ E P+ EP PH
Sbjct: 182 PAKLKGQMIRRLPKL-------CEVPSTWIQIEPDAPH 212
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 12/120 (10%)
Query: 290 AAEPSCPHPCRCADG----IVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYI 345
A CP C C+D + DC K ++VP + P + L+ +S + + V S++
Sbjct: 9 AVASRCPELCACSDKQDRYVADCSSKSFSEVPEVFPADVSTLS--LSANGISAVRSGSFL 66
Query: 346 SNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L N I + P N L+ ++++ N + LP AF+ K LR +
Sbjct: 67 G------VAQLMTLCHNSIVDFPWGDLQNLTNLQLLKMDHNKMVHLPKDAFSTLKDLRYL 120
>gi|395742941|ref|XP_002821984.2| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
G-protein coupled receptor 4, partial [Pongo abelii]
Length = 1032
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 87 PTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFA 145
P+G AA P C PC C D VDC KGL VP L T L + N+IT+LP AF
Sbjct: 102 PSG--AAPPLCAAPCSCDGDRRVDCSGKGLTAVPEGLSAFTQALDISMNNITQLPEDAFK 159
Query: 146 NYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISE 205
N+ L + L+ N +S + A GLK L LTL NN L +P L L++LR+
Sbjct: 160 NFPFLEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSTLQSLRLDA 219
Query: 206 N 206
N
Sbjct: 220 N 220
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 52/122 (42%), Gaps = 33/122 (27%)
Query: 285 PTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYS 343
P+G AA P C PC C D VDC KGL VP E + T + I
Sbjct: 102 PSG--AAPPLCAAPCSCDGDRRVDCSGKGLTAVP----EGLSAFTQALDI---------- 145
Query: 344 YISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLR 403
N+IT+LP AF N+ L ++L ND++ + PKA + K L+
Sbjct: 146 ----------------SMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLKELK 189
Query: 404 RM 405
+
Sbjct: 190 VL 191
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 10/150 (6%)
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL--NKVPILL 122
I NI +PE FK + P + + S HP + G+ + + L N++ +
Sbjct: 145 ISMNNITQLPEDAFK-NFPFLEELQLAGNDLSFIHP-KALSGLKELKVLTLQNNQLKTVP 202
Query: 123 PEAT------TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
EA LRL+ N IT +P +F +LR + L N +++V V L +L +
Sbjct: 203 SEAIRGLSTLQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQA 262
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
LTL N ++ +PD F L L L + N
Sbjct: 263 LTLALNKISSIPDFAFTNLSSLVVLHLHNN 292
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 89/213 (41%), Gaps = 27/213 (12%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLH-RWLKRYPRLGLYTKCFAPS 63
++ NN+T LP+ F L L+++ N LS++H + L L + T
Sbjct: 145 ISMNNITQLPEDAFKNFPFLEELQLAGND------LSFIHPKALSGLKELKVLT------ 192
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCR-----EKGLNKV 118
++ + +P + ++ + S P +G+V R + L +V
Sbjct: 193 -LQNNQLKTVPSEAIRGLSTLQSLRLDANHITSVPE--DSFEGLVQLRHLWLDDNSLTEV 249
Query: 119 PIL----LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSL 174
P+ LP L L N I+ +P AF N L + L N+I ++ F GL +L
Sbjct: 250 PVHPLSNLP-TLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNL 308
Query: 175 TSLTLNNNNLTYLPDGVFAELFRLRTLRISENS 207
+L LN NNL P + A L L+ L NS
Sbjct: 309 ETLDLNYNNLGEFPQAIKA-LPSLKELGFHSNS 340
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
A E+ L++N I ++ F LR +DLS+N I ++ AF L +T+L ++ N
Sbjct: 446 HALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIHSRAFATLGPITNLDVSFNE 505
Query: 184 LTYLP 188
LT P
Sbjct: 506 LTSFP 510
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N+I +LP +F L I L +NQI ++ FQGL SL L L+ N + +
Sbjct: 429 LDLSYNNIRDLP--SFNGCHALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIH 486
Query: 189 DGVFAELFRLRTLRISEN 206
FA L + L +S N
Sbjct: 487 SRAFATLGPITNLDVSFN 504
>gi|76161601|gb|ABA39897.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 169
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 13/169 (7%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDCR K VP +P L L N IT+L P F L+R+ L
Sbjct: 1 ACPSQCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDRLVNLQRLWL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
+ NQ++ + F L LT L+L N L +P G F L L + + N + C C +
Sbjct: 61 NNNQLTSLPAGVFDKLTKLTHLSLGYNQLKSIPRGAFDNLKSLTHVWLHTNPWDCQCTDI 120
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L W+ ++ S I G+ + KCSG++ R+
Sbjct: 121 LYLSGWVAQH------------SGIVGEGWWTVNPDNVKCSGTNTPVRA 157
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ VDCR K VP +P ++ Y+ +++ K+ F R
Sbjct: 1 ACPSQCSCSGTTVDCRSKRHASVPAGIP-TNAQILYLHD-NQITKLE-----PGVFDRLV 53
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R L N +T LP F +L + L N + +P AF N K L +
Sbjct: 54 NLQRLWLNNNQLTSLPAGVFDKLTKLTHLSLGYNQLKSIPRGAFDNLKSLTHV 106
>gi|70955632|gb|AAZ16377.1| variable lymphocyte receptor B [Eptatretus stoutii]
Length = 258
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 77/170 (45%), Gaps = 12/170 (7%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ + C KGL VP +P TT LRL+ N + LP F +L+++ L
Sbjct: 23 ACPSRCSCSGTELRCYSKGLTSVPTGIPARTTYLRLDSNKLQSLPNGVFDKLTQLKKLWL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLS 215
N++ + F L S T+L L+ N L +PDG+F L L+ + + N + C C
Sbjct: 83 DDNKLQSLPDGVFDKLTSTTNLQLHVNKLKSVPDGIFDRLTSLQKIWLHTNPWDCSC--- 139
Query: 216 WLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKI 265
PR+ ++ + K + KCSGS RS I
Sbjct: 140 ---------PRIDYLSRFIQKNSNKVYKGWSVDPDSAKCSGSGKPVRSII 180
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 47/113 (41%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ + C KGL VP +P TT L R+D L S + F + T
Sbjct: 23 ACPSRCSCSGTELRCYSKGLTSVPTGIPARTTYL-------RLDSNKLQSLPNGVFDKLT 75
Query: 354 NRSRR-LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L+ N + LP F ++L N + +P F L+++
Sbjct: 76 QLKKLWLDDNKLQSLPDGVFDKLTSTTNLQLHVNKLKSVPDGIFDRLTSLQKI 128
>gi|354480788|ref|XP_003502586.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein
2-like [Cricetulus griseus]
Length = 516
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 76/161 (47%), Gaps = 12/161 (7%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP CRC + C +G + VP + + L L N IT L FA++ +L
Sbjct: 29 ALGMACPPKCRCEKLLFYCDSQGFHSVPNATDKGSLGLSLRHNHITALERDQFASFSQLT 88
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICD 211
+ L NQIS V DAFQGL L L L++N + YLP+ F +L L+ L +S N
Sbjct: 89 WLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFN----- 143
Query: 212 CHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
LS LH P L + H++ ++ IP F
Sbjct: 144 -QLSSLH------PELFYGLRKLQTLHLRSNSLRTIPVRLF 177
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 114/276 (41%), Gaps = 27/276 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N + YLP+ F +L L+ L +S N LS LH P L + H
Sbjct: 116 LSSNKIFYLPNTTFTQLINLQNLDLSFN------QLSSLH------PELFYGLRKLQTLH 163
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL--------N 116
++ ++ IP F +E S G++ RE L N
Sbjct: 164 LRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLAR--NGFAGLIKLRELHLEHNQLTKIN 221
Query: 117 KVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
L + L L+ N I+ L + L ++DL+ N+I + + F+ + +L
Sbjct: 222 FAHFLRLSSLHTLFLQWNKISNLTCGMEWTWSTLEKLDLTGNEIKAIDLTVFETMPNLKI 281
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFA 235
L L+NN L+ L + L L T+ +S N + C + L WL + R C +
Sbjct: 282 LLLDNNKLSSLDSKILNSLRSLTTVGLSGNLWECSSRVCALASWLGSFQGRWEHSILCHS 341
Query: 236 PSHIKGQNILDIPEHEFKCS---GSSMETRSKIYRE 268
P H +G++ILD H F+ +++ + YRE
Sbjct: 342 PDHTQGEDILD-AVHGFQLCWNLSTTVTAMATTYRE 376
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL L N I LP F L+ +DLS NQ+S + + F GL+ L +L L +N+L +
Sbjct: 113 ELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTI 172
Query: 188 PDGVFAELFRLRTLRISEN 206
P +F + L L +S N
Sbjct: 173 PVRLFWDCRSLEFLDLSTN 191
>gi|119928684|dbj|BAF43163.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 168
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 14/169 (8%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDCR K L+ VP +P T L N IT+L P F +L ++DL
Sbjct: 11 ACPARCSCSGTTVDCRNKRLSSVPAGIPTTTQVLGFYSNRITKLEPGVFDRLAQLTQLDL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
S NQ + + F L +L L+L+ N L +P G F L L + + N + C+C +
Sbjct: 71 SHNQFTALPAGVFDRLGNLQWLSLHTNQLKSIPRGAFDNLKSLTHIYLFNNPWDCECSDI 130
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L W+ ++ + P+ G + KCSG++ R+
Sbjct: 131 LYLKNWIVQHASI------VNPAGYGGVD-------NVKCSGTNTPVRA 166
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ VDCR K L+ VP +P T L + +R+ K L + + + T
Sbjct: 11 ACPARCSCSGTTVDCRNKRLSSVPAGIPTTTQVLGFYS--NRITK--LEPGVFDRLAQLT 66
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N T LP F L+ + L N + +P AF N K L +
Sbjct: 67 QLD--LSHNQFTALPAGVFDRLGNLQWLSLHTNQLKSIPRGAFDNLKSLTHI 116
>gi|1236329|gb|AAB41565.1| p37NB [Homo sapiens]
Length = 313
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 117/291 (40%), Gaps = 45/291 (15%)
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
+DC+E+ L V P+ + L +N I L F+ +K+L+ +DL +N+ISK+ +A
Sbjct: 65 LDCQERKLVYVLPGWPQDLLHMLLARNKIRTLKNNMFSKFKKLKSLDLQQNEISKIESEA 124
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYP 225
F GL LT+L L +N + L + VF L LR+ +N + C C + L L+ R
Sbjct: 125 FFGLNKLTTLLLQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCEIETLISMLQIPRNR 184
Query: 226 RLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKP 285
L Y KC +P K + + I + C+ EE P P
Sbjct: 185 NLANYAKCESPQEQKNKKLRQIKSEQL-CN------------EEEKEQLDPKPQVSGRPP 231
Query: 286 TGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYI 345
+ + + H +DC+ K L KVP +P +L
Sbjct: 232 VIKPEVDSTFCHNYVFPIQTLDCKRKELKKVPNNIPPDIVKLD----------------- 274
Query: 346 SNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L N I +L PK F + L+++ L N I + P +
Sbjct: 275 -------------LSYNKINQLRPKEFEDVHELKKLNLSSNGIEFIDPGSL 312
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 74/169 (43%), Gaps = 13/169 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYPRLGLYTKCFAP 62
L +N + L + VF L LR+ +N + C C + L L+ R L Y KC +P
Sbjct: 136 LQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCEIETLISMLQIPRNRNLANYAKCESP 195
Query: 63 SHIKGQNILDIPEHEFKCSGPVEK--PTGECAAEPSCPHP----CRCADGI-----VDCR 111
K + + I + E+ P + + P P C + + +DC+
Sbjct: 196 QEQKNKKLRQIKSEQLCNEEEKEQLDPKPQVSGRPPVIKPEVDSTFCHNYVFPIQTLDCK 255
Query: 112 EKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQI 160
K L KVP +P +L L N I +L PK F + L++++LS N I
Sbjct: 256 RKELKKVPNNIPPDIVKLDLSYNKINQLRPKEFEDVHELKKLNLSSNGI 304
>gi|260807517|ref|XP_002598555.1| hypothetical protein BRAFLDRAFT_66946 [Branchiostoma floridae]
gi|229283828|gb|EEN54567.1| hypothetical protein BRAFLDRAFT_66946 [Branchiostoma floridae]
Length = 265
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 16/195 (8%)
Query: 96 SCPHPCRC-----ADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRL 150
+CP C+C + +V C GL ++P +P L L+ N+IT++ +F + L
Sbjct: 20 ACPSACKCTVSLYGEMVVACGGMGLTEIPEDIPHRAVYLVLKDNNITKITSYSFKGLRNL 79
Query: 151 RRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF-------AELFRLRTLRI 203
+ IDLS N+I+ ++ A + L L + L+ N LT + + +F R + +
Sbjct: 80 QGIDLSNNKINHISSAALRHLGHLDDIDLSRNELTSVSEKLFDFPISSAKAQGRRFFVYL 139
Query: 204 SENSFICDCHLSWLHRWLKRYPRL--GLYTKCFAPSHIKGQNILDIPEHEFKCSGS--SM 259
+ N + CDC ++WL + L + + +C P+ + G+ + +IP+ F C+G S
Sbjct: 140 ANNPWGCDCRMAWLAQELAGGSKTFGDRHMECATPAALAGRGLSEIPQTSFVCTGRDISF 199
Query: 260 ETRSKIYREECSTDF 274
++ I E ST F
Sbjct: 200 DSDGIIATPEESTAF 214
>gi|119926523|dbj|BAF43286.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 180
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C+ + VP +P T ELRL N IT+L P F + L ++L
Sbjct: 11 ACPARCSCSGASVECQSRSFASVPAGIPTTTRELRLYTNQITKLEPGVFDSLTALTALNL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
N++ + F L +L SL L+ N L +P G F L L + + +N + C C +
Sbjct: 71 GSNRLQALPEGVFDRLVNLQSLVLHTNQLKSIPRGAFDNLKSLTHIWLFDNPWDCGCSDI 130
Query: 215 SWLHRWLKRYPRL 227
+L RW+ ++P +
Sbjct: 131 LYLSRWISQHPGV 143
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTEL-TYMVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ V+C+ + VP +P T EL Y I +++ + S +
Sbjct: 11 ACPARCSCSGASVECQSRSFASVPAGIPTTTRELRLYTNQITKLEPGVFDSLTALT---- 66
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L N + LP F L+ + L N + +P AF N K L +
Sbjct: 67 ---ALNLGSNRLQALPEGVFDRLVNLQSLVLHTNQLKSIPRGAFDNLKSLTHI 116
>gi|194221150|ref|XP_001495218.2| PREDICTED: leucine-rich repeats and immunoglobulin-like domains 1
[Equus caballus]
Length = 1045
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 65/130 (50%), Gaps = 4/130 (3%)
Query: 129 LRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLT 185
L L+ NDI+ E AF L ++ L N+I VA AF GL+ L L L N +
Sbjct: 303 LDLDHNDISGTIEDTTGAFTGLDSLSKLTLFGNKIKSVAKRAFSGLEGLEHLNLGENAIR 362
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW-LKRYPRLGLYTKCFAPSHIKGQNI 244
+ F ++ L+ L IS +SF+CDC L WL W L R + + C P +KGQ+I
Sbjct: 363 SVQFDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLLSRMLQTFVTATCAHPESLKGQSI 422
Query: 245 LDIPEHEFKC 254
+P F C
Sbjct: 423 FSVPPESFVC 432
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 133 QNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
+N IT+LP KAF RL ++DL++N+I + FQGL SL L L NN++ L DG F
Sbjct: 140 KNRITQLPVKAF-KLPRLTQLDLNRNRIRLIEGLTFQGLDSLEVLKLQRNNISKLTDGAF 198
Query: 193 AELFRLRTLRISENSFI 209
L ++ L + NS +
Sbjct: 199 WGLSKMHVLHLEYNSLV 215
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW-LKRYPRLGLYTKCFAPS 63
L N + + F ++ L+ L IS +SF+CDC L WL W L R + + C P
Sbjct: 356 LGENAIRSVQFDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLLSRMLQTFVTATCAHPE 415
Query: 64 HIKGQNILDIPEHEFKC 80
+KGQ+I +P F C
Sbjct: 416 SLKGQSIFSVPPESFVC 432
>gi|119926339|dbj|BAF43209.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 193
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 70/153 (45%), Gaps = 25/153 (16%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRL----- 150
+CP C C+ V+C+ + VP +P T ELRL N IT+L P F + +L
Sbjct: 11 ACPAQCSCSGASVECQSRSFASVPAGIPTTTRELRLYTNQITKLEPGVFDSLTQLTYLNL 70
Query: 151 -------------------RRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGV 191
+++ L NQ+S + V F L LT L LN N L +PDG
Sbjct: 71 QTNQLTALPEGVFDHLMSLQKLYLGDNQLSALPVGVFDKLTQLTDLGLNGNQLKSVPDGA 130
Query: 192 FAELFRLRTLRISENSFICDC-HLSWLHRWLKR 223
FA L L + + N + C C + +L RW+ R
Sbjct: 131 FARLSSLTHVWLHTNPWDCACXDILYLSRWISR 163
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTEL-TYMVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ V+C+ + VP +P T EL Y I +++ + S +
Sbjct: 11 ACPAQCSCSGASVECQSRSFASVPAGIPTTTRELRLYTNQITKLEPGVFDSLTQLTY--- 67
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L+ N +T LP F + L+++ L N ++ LP F +L +
Sbjct: 68 ----LNLQTNQLTALPEGVFDHLMSLQKLYLGDNQLSALPVGVFDKLTQLTDL 116
>gi|449270028|gb|EMC80755.1| Leucine-rich repeat-containing protein 26, partial [Columba livia]
Length = 253
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 74/153 (48%), Gaps = 24/153 (15%)
Query: 94 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRI 153
P+CP CRC+ VDC E+GL +VP LP T+ L L N IT L P++F LR +
Sbjct: 25 SPACPAVCRCSAEEVDCSERGLRQVPQGLPANTSTLWLGYNFITVLGPRSFLTLPGLRLL 84
Query: 154 DLSKNQISKVAVDAFQGLKSLTSLTLNNNNL------TYLP------------------D 189
LS N++ + A GL +L L L++N+L T+LP
Sbjct: 85 SLSHNRLGMIHSRALLGLGALQELDLSSNHLTTLSPETFLPLTSLATLNLVSNKLGQLDP 144
Query: 190 GVFAELFRLRTLRISENSFICDCHLSWLHRWLK 222
GV L +LR + + N + C C + L RWL
Sbjct: 145 GVLGALPQLRAVLLRGNPWACSCDILPLWRWLS 177
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 52/132 (39%), Gaps = 18/132 (13%)
Query: 292 EPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRV---------DKVLLY 342
P+CP CRC+ VDC E+GL +VP LP T+ L + V + L
Sbjct: 25 SPACPAVCRCSAEEVDCSERGLRQVPQGLPANTSTLWLGYNFITVLGPRSFLTLPGLRLL 84
Query: 343 SYISNNFKRWTNRSRR---------LEQNDITELPPKAFANYKRLRRIRLEQNDITELPP 393
S N +R+ L N +T L P+ F L + L N + +L P
Sbjct: 85 SLSHNRLGMIHSRALLGLGALQELDLSSNHLTTLSPETFLPLTSLATLNLVSNKLGQLDP 144
Query: 394 KAFANYKRLRRM 405
+LR +
Sbjct: 145 GVLGALPQLRAV 156
>gi|417413238|gb|JAA52956.1| Putative glycoprotein hormone receptor, partial [Desmodus rotundus]
Length = 952
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 65/126 (51%), Gaps = 3/126 (2%)
Query: 82 GPVEKPTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELRLEQNDITELP 140
G +P+G AA P C PC C D VDC KGL VP L T L + N+IT+LP
Sbjct: 17 GCSTEPSG--AAPPLCAAPCSCDGDRRVDCSGKGLTSVPEGLSAFTLALDISMNNITQLP 74
Query: 141 PKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRT 200
AF N+ L + L+ N +S + A GLK L LTL NN L +P L L++
Sbjct: 75 EDAFKNFPFLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQS 134
Query: 201 LRISEN 206
LR+ N
Sbjct: 135 LRLDAN 140
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 53/123 (43%), Gaps = 33/123 (26%)
Query: 284 KPTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLY 342
+P+G AA P C PC C D VDC KGL VP E + T + I
Sbjct: 21 EPSG--AAPPLCAAPCSCDGDRRVDCSGKGLTSVP----EGLSAFTLALDI--------- 65
Query: 343 SYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
N+IT+LP AF N+ L +RL ND++ + PKA + K L
Sbjct: 66 -----------------SMNNITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKEL 108
Query: 403 RRM 405
+ +
Sbjct: 109 KVL 111
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 66/150 (44%), Gaps = 10/150 (6%)
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADG-----IVDCREKGLNKVP 119
I NI +PE FK + P + + S HP + G ++ + L VP
Sbjct: 65 ISMNNITQLPEDAFK-NFPFLEELRLAGNDLSFIHP-KALSGLKELKVLTLQNNQLKTVP 122
Query: 120 ---ILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
I A LRL+ N IT +P +F +LR + L N +++V V L +L +
Sbjct: 123 SEAIRGLSALQSLRLDANHITSVPEDSFEGLAQLRHLWLDDNSLTEVPVHPLSNLPALQA 182
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
LTL N ++ +PD F L L L + N
Sbjct: 183 LTLALNRISSIPDFAFTNLSSLVVLHLHNN 212
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 91/219 (41%), Gaps = 39/219 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
++ NN+T LP+ F L LR++ N LS++H P+ A S
Sbjct: 65 ISMNNITQLPEDAFKNFPFLEELRLAGND------LSFIH------PK--------ALSG 104
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECA-------AEPSCPHPCRCADGIVDCR-----E 112
+K +L + ++ K + P E G A A P +G+ R +
Sbjct: 105 LKELKVLTLQNNQLK-TVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLAQLRHLWLDD 163
Query: 113 KGLNKVPIL----LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAF 168
L +VP+ LP A L L N I+ +P AF N L + L N+I + F
Sbjct: 164 NSLTEVPVHPLSNLP-ALQALTLALNRISSIPDFAFTNLSSLVVLHLHNNKIKSLGPHCF 222
Query: 169 QGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENS 207
GL +L +L LN NNL P + A L L+ L NS
Sbjct: 223 DGLDNLETLDLNYNNLGEFPQAIKA-LPSLKELLFHSNS 260
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL 184
A E+ L++N I ++ F LR +DLS+N I ++ V AF L S+T+L ++ N L
Sbjct: 367 ALEEISLQRNQIRQIKEGTFQGLISLRILDLSRNLIHEIHVRAFVNLGSITNLDVSFNEL 426
Query: 185 TYLP 188
T P
Sbjct: 427 TSFP 430
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N+I ELP +F + L I L +NQI ++ FQGL SL L L+ N + +
Sbjct: 349 LDLSYNNIKELP--SFNGCRALEEISLQRNQIRQIKEGTFQGLISLRILDLSRNLIHEIH 406
Query: 189 DGVFAELFRLRTLRISEN 206
F L + L +S N
Sbjct: 407 VRAFVNLGSITNLDVSFN 424
>gi|126331437|ref|XP_001374995.1| PREDICTED: relaxin receptor 1 [Monodelphis domestica]
Length = 758
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 68/124 (54%), Gaps = 2/124 (1%)
Query: 83 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPK 142
P E T EC E S P C C +DC E L VP + T + L+ N + +LP
Sbjct: 87 PFETETSECLVE-SVPVKCLCQGLELDCDEANLRAVPSV-SSNVTMMSLQWNLLKKLPSD 144
Query: 143 AFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLR 202
F Y+ L+++ L N+I V+V AF+GL +LT L L++N +T L GVF +L RL L
Sbjct: 145 GFKKYQDLQKLYLQNNKIRSVSVYAFRGLHNLTKLYLSHNKITVLKPGVFEDLHRLEWLI 204
Query: 203 ISEN 206
I +N
Sbjct: 205 IEDN 208
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 54/126 (42%), Gaps = 10/126 (7%)
Query: 281 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL 340
P E T EC E S P C C +DC E L V P ++ +T M + L
Sbjct: 87 PFETETSECLVE-SVPVKCLCQGLELDCDEANLRAV----PSVSSNVTMM----SLQWNL 137
Query: 341 LYSYISNNFKRWTNRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANY 399
L S+ FK++ + + L+ N I + AF L ++ L N IT L P F +
Sbjct: 138 LKKLPSDGFKKYQDLQKLYLQNNKIRSVSVYAFRGLHNLTKLYLSHNKITVLKPGVFEDL 197
Query: 400 KRLRRM 405
RL +
Sbjct: 198 HRLEWL 203
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL L N I LPP F + K L +++LS N I K+ D F L L SL+L ++ +
Sbjct: 299 ELDLASNKIEALPPYLFKDLKELSQLNLSYNPIQKIQADQFDYLVKLKSLSLEGIEISNI 358
Query: 188 PDGVFAEL 195
+FA L
Sbjct: 359 QRRMFAPL 366
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 80/201 (39%), Gaps = 33/201 (16%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY-TKCFAPS 63
L++N +T L GVF +L RL L I +N L R L Y
Sbjct: 181 LSHNKITVLKPGVFEDLHRLEWLIIEDNQ-------------LSRISPLTFYGLNSLILL 227
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCRE-KGLNKVPILL 122
+ +++ +P+ +P C H R + L + +
Sbjct: 228 ALMNNSLVHLPD------------------KPLCQHMPRLHWLDFEGNHIHNLRNMTFIS 269
Query: 123 PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNN 182
T L + +N+I L +FA ++L +DL+ N+I + F+ LK L+ L L+ N
Sbjct: 270 CSTLTVLVMRKNEINHLNENSFAPLQKLDELDLASNKIEALPPYLFKDLKELSQLNLSYN 329
Query: 183 NLTYLPDGVFAELFRLRTLRI 203
+ + F L +L++L +
Sbjct: 330 PIQKIQADQFDYLVKLKSLSL 350
>gi|260822199|ref|XP_002606490.1| hypothetical protein BRAFLDRAFT_60354 [Branchiostoma floridae]
gi|229291832|gb|EEN62500.1| hypothetical protein BRAFLDRAFT_60354 [Branchiostoma floridae]
Length = 333
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 64/114 (56%), Gaps = 2/114 (1%)
Query: 97 CPHPCRC--ADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRID 154
CP+ C C G V+CREKG VP + + L N++T + ++F ++RL +
Sbjct: 9 CPNQCACNAVSGFVNCREKGFTNVPGGMGADVDYINLGNNNLTRITTQSFERFRRLHYLT 68
Query: 155 LSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
L +N IS +A AF+ ++ L L L N+LT+L GVF L L+ LR+S NS
Sbjct: 69 LDRNHISDIAELAFENMRELRVLNLQWNSLTFLRKGVFRGLINLQDLRLSYNSL 122
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 32/111 (28%)
Query: 295 CPHPCRC--ADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRW 352
CP+ C C G V+CREKG VP + +D ++
Sbjct: 9 CPNQCACNAVSGFVNCREKGFTNVPGGMG---------ADVDYIN--------------- 44
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLR 403
L N++T + ++F ++RL + L++N I+++ AF N + LR
Sbjct: 45 ------LGNNNLTRITTQSFERFRRLHYLTLDRNHISDIAELAFENMRELR 89
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 77/182 (42%), Gaps = 43/182 (23%)
Query: 8 NNLTYLPDGVFAELFRLRTLRISENS-----FICDCHLSWLHR-WLKRYPRLGLYTKCFA 61
N+LT+L GVF L L+ LR+S NS F+ + L L +L R L + FA
Sbjct: 96 NSLTFLRKGVFRGLINLQDLRLSYNSLRKLGFLNEEDLYSLQTLYLDRNNISTLNSLTFA 155
Query: 62 PSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPIL 121
H L E+ +E DGI L+ +L
Sbjct: 156 HLHS-----LKFVHLEYNKLSAME-------------------DGIF---SGSLDVEHVL 188
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKS-LTSLTLN 180
L N IT++ P +F + + LR ++L NQ+S V + F+ +KS T+L L+
Sbjct: 189 LT---------GNRITKMSPSSFKDLRTLRSLNLDVNQLSSVKFETFRNIKSRYTNLYLD 239
Query: 181 NN 182
+N
Sbjct: 240 SN 241
>gi|348506142|ref|XP_003440619.1| PREDICTED: leucine-rich repeat-containing protein 4-like
[Oreochromis niloticus]
Length = 664
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 116/260 (44%), Gaps = 45/260 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCF--AP 62
L +N LT +P G F L +LR L WL+ P + + F P
Sbjct: 130 LFDNRLTVIPSGAFEYLSKLREL------------------WLRNNPIESIPSYAFNRVP 171
Query: 63 SHIKGQNILDIPEH---EFKCSGPVEKPTGECAAEPSCPHPCRCAD-GIVDCREKGLNKV 118
S ++ LD+ E E+ G E H + + G+ + RE N
Sbjct: 172 SLMR----LDLGELRKLEYISDGAFEGL-----------HNLKYLNLGMCNLREFP-NLS 215
Query: 119 PILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLT 178
P++ E EL + +N EL P AF K LR++ + + I+ + +AF + +L L
Sbjct: 216 PLVGLE---ELEISENVFPELKPGAFRGLKNLRKLWIMNSAITMIERNAFDDITALVELN 272
Query: 179 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAP 236
L +NNL+ LP +F L L L + N + CDC + WL WL+ Y +C P
Sbjct: 273 LAHNNLSSLPHNLFTPLQYLVELHLHHNPWRCDCDVVWLSWWLREYIPTNSTCCGRCHTP 332
Query: 237 SHIKGQNILDIPEHEFKCSG 256
H++G+ ++++ + F+CS
Sbjct: 333 VHMRGRYLVEVDQTTFQCSA 352
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 63/118 (53%), Gaps = 3/118 (2%)
Query: 92 AAEP-SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYK 148
+A+P +CP C C + + V C +GL +VP +P T L L +N I + F +
Sbjct: 40 SAKPQNCPGVCSCTNQLSKVVCTRRGLIRVPPNIPANTRYLNLMENSIETIQADTFRHLH 99
Query: 149 RLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
L + L +N I ++ V AF GL SL +L L +N LT +P G F L +LR L + N
Sbjct: 100 HLEVLQLGRNAIRQIEVGAFNGLTSLNTLELFDNRLTVIPSGAFEYLSKLRELWLRNN 157
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAP 62
L +NNL+ LP +F L L L + N + CDC + WL WL+ Y +C P
Sbjct: 273 LAHNNLSSLPHNLFTPLQYLVELHLHHNPWRCDCDVVWLSWWLREYIPTNSTCCGRCHTP 332
Query: 63 SHIKGQNILDIPEHEFKCSGP--VEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
H++G+ ++++ + F+CS P ++ P + R A+ + CR ++ V
Sbjct: 333 VHMRGRYLVEVDQTTFQCSAPFILDAPRDLNISA------ARVAE--LKCRTAAMSSVRW 384
Query: 121 LLPEATT 127
LLP T
Sbjct: 385 LLPNGTV 391
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 12/133 (9%)
Query: 277 YNSCPVEKPTGECAAEPSCPHPCRCADGI--VDCREKGLNKVPILLPEATTELTYMV-SI 333
+ C P A +CP C C + + V C +GL +VP +P T L M SI
Sbjct: 28 FTMCQSTGPEFGSAKPQNCPGVCSCTNQLSKVVCTRRGLIRVPPNIPANTRYLNLMENSI 87
Query: 334 DRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELP 392
+ + ++ F+ + +L +N I ++ AF L + L N +T +P
Sbjct: 88 ETIQ--------ADTFRHLHHLEVLQLGRNAIRQIEVGAFNGLTSLNTLELFDNRLTVIP 139
Query: 393 PKAFANYKRLRRM 405
AF +LR +
Sbjct: 140 SGAFEYLSKLREL 152
>gi|29725617|ref|NP_821072.1| leucine-rich repeat transmembrane neuronal protein 2 precursor [Mus
musculus]
gi|68052344|sp|Q8BGA3.1|LRRT2_MOUSE RecName: Full=Leucine-rich repeat transmembrane neuronal protein 2;
Flags: Precursor
gi|26335567|dbj|BAC31484.1| unnamed protein product [Mus musculus]
gi|26335905|dbj|BAC31653.1| unnamed protein product [Mus musculus]
gi|26336719|dbj|BAC32042.1| unnamed protein product [Mus musculus]
gi|26338395|dbj|BAC32883.1| unnamed protein product [Mus musculus]
gi|26340646|dbj|BAC33985.1| unnamed protein product [Mus musculus]
gi|29542687|gb|AAO67548.1| leucine-rich repeat transmembrane neuronal 2 protein [Mus musculus]
gi|147898073|gb|AAI40382.1| Leucine rich repeat transmembrane neuronal 2 [synthetic construct]
gi|148664709|gb|EDK97125.1| leucine rich repeat transmembrane neuronal 2 [Mus musculus]
gi|148922463|gb|AAI46466.1| Leucine rich repeat transmembrane neuronal 2 [synthetic construct]
Length = 515
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 76/161 (47%), Gaps = 12/161 (7%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP CRC + C +G + VP + + L L N IT L FA++ +L
Sbjct: 29 ALGMACPPKCRCEKLLFYCDSQGFHSVPNATDKGSLGLSLRHNHITALERDQFASFSQLT 88
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICD 211
+ L NQIS V DAFQGL L L L++N + YLP+ F +L L+ L +S N
Sbjct: 89 WLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFN----- 143
Query: 212 CHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
LS LH P L + H++ ++ IP F
Sbjct: 144 -QLSSLH------PELFYGLRKLQTLHLRSNSLRTIPVRLF 177
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 106/258 (41%), Gaps = 24/258 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N + YLP+ F +L L+ L +S N LS LH P L + H
Sbjct: 116 LSSNKIFYLPNTTFTQLINLQNLDLSFN------QLSSLH------PELFYGLRKLQTLH 163
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL--------N 116
++ ++ IP F +E S G++ RE L N
Sbjct: 164 LRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLAR--NGFAGLIKLRELHLEHNQLTKIN 221
Query: 117 KVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
L + L L+ N I+ L + L ++DL+ N+I + + F+ + +L
Sbjct: 222 FAHFLRLSSLHTLFLQWNKISNLTCGMDWTWSTLEKLDLTGNEIKAIDLTVFETMPNLKI 281
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFA 235
L ++NN L L + L L T+ +S N + C + L WL + R C +
Sbjct: 282 LLMDNNKLNSLDSKILNSLKSLTTVGLSGNLWECSPRVCALASWLGSFQGRWEHSILCHS 341
Query: 236 PSHIKGQNILDIPEHEFK 253
P H +G++ILD H F+
Sbjct: 342 PDHTQGEDILD-AVHGFQ 358
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL L N I LP F L+ +DLS NQ+S + + F GL+ L +L L +N+L +
Sbjct: 113 ELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTI 172
Query: 188 PDGVFAELFRLRTLRISEN 206
P +F + L L +S N
Sbjct: 173 PVRLFWDCRSLEFLDLSTN 191
>gi|76161942|gb|ABA40061.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 185
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 63/136 (46%), Gaps = 6/136 (4%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC K L VP +P T L L N IT+L P F L+++ L
Sbjct: 1 ACPSQCSCSGTTVDCSGKSLASVPTGIPTTTQVLYLHVNQITKLEPGVFDRLVNLQQLYL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF------I 209
NQ+ + V F L LT L+L N+L LPDGVF L L+ L + N
Sbjct: 61 GSNQLGALPVGVFDSLTQLTVLSLPTNHLQALPDGVFGRLENLQRLDLRYNQLKSIPRGA 120
Query: 210 CDCHLSWLHRWLKRYP 225
D S H WL P
Sbjct: 121 FDNLKSLTHIWLYGNP 136
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ VDC K L VP +P TT++ Y+ ++++ K+ F R
Sbjct: 1 ACPSQCSCSGTTVDCSGKSLASVPTGIP-TTTQVLYL-HVNQITKL-----EPGVFDRLV 53
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N + L N + LP F + +L + L N + LP F + L+R+
Sbjct: 54 NLQQLYLGSNQLGALPVGVFDSLTQLTVLSLPTNHLQALPDGVFGRLENLQRL 106
>gi|284010986|dbj|BAI66968.1| variable lymphocyte receptor B [Eptatretus burgeri]
Length = 250
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C+ K VP P +TT L L N + +P F +L+ + L
Sbjct: 23 ACPSRCSCSGTTVSCQSKSFTSVPSGFPSSTTILYLHTNQLQSIPDGVFEKLTQLKELYL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
+N++ + F L LT L L N L +PDGVF L L+++ + N + C C +
Sbjct: 83 HQNKLQSLPNGVFDKLTGLTHLDLETNQLKSVPDGVFDRLTSLQSIYLYSNPWDCTCPGV 142
Query: 215 SWLHRWL 221
+L RWL
Sbjct: 143 DYLSRWL 149
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 44/113 (38%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V C+ K VP P +TT I + L S F++ T
Sbjct: 23 ACPSRCSCSGTTVSCQSKSFTSVPSGFPSSTT-------ILYLHTNQLQSIPDGVFEKLT 75
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L QN + LP F L + LE N + +P F L+ +
Sbjct: 76 QLKELYLHQNKLQSLPNGVFDKLTGLTHLDLETNQLKSVPDGVFDRLTSLQSI 128
>gi|390363757|ref|XP_003730443.1| PREDICTED: G-protein coupled receptor 124-like [Strongylocentrotus
purpuratus]
Length = 236
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 33/187 (17%)
Query: 96 SCPHPCRCADGIVDCREKGLNK------------------------VPI-LLPEATTELR 130
+CP C C D REKG K +P+ +PE T L
Sbjct: 25 ACPSNCNC-----DVREKGRGKWGGERGGSKARRVLECTGRSLTRPIPVNAIPEDTVLLD 79
Query: 131 LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDG 190
L N++ + AF ++ ++LS+N IS + AF+GL SLT L L+NN L + +
Sbjct: 80 LSNNNMKTIRGGAFTGLSSVQILNLSRNSISYIEPRAFEGLTSLTVLDLSNNMLGSVNNT 139
Query: 191 VFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGL--YTKCFAPSHIKGQNILDI 247
+F L L L + +CDC L W+ +W + R P++ + T C P + G + +
Sbjct: 140 MFIGLSSLEELEFASEYLVCDCKLDWIVKWKRNRTPKVKISDSTTCAVPESLAGNQVSSL 199
Query: 248 PEHEFKC 254
+ + C
Sbjct: 200 KKAQLNC 206
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGL--YTKCFA 61
L+NN L + + +F L L L + +CDC L W+ +W + R P++ + T C
Sbjct: 128 LSNNMLGSVNNTMFIGLSSLEELEFASEYLVCDCKLDWIVKWKRNRTPKVKISDSTTCAV 187
Query: 62 PSHIKGQNILDIPEHEFKCSGPVE 85
P + G + + + + C P++
Sbjct: 188 PESLAGNQVSSLKKAQLNCDFPLQ 211
>gi|119928569|dbj|BAF43109.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 171
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 11/169 (6%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C KG+ VP +P L L N IT+L P F + +L ++L
Sbjct: 11 ACPARCSCSGTEVNCWNKGIASVPAGIPNNAQILYLHVNQITKLEPGVFDSLTQLTNLNL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ+ + F L L LTL NN L +P G F L L + + N + C C +
Sbjct: 71 HTNQLQALPAGVFDKLTQLIELTLYNNQLKSIPRGAFDNLKSLTHIWLFNNPWDCGCSDI 130
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L RW+ ++P + +G++ + +CSG++ R+
Sbjct: 131 LYLSRWISQHPGVVR----------RGESGYAVDPDHARCSGTNTPVRA 169
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C KG+ VP +P ++ Y+ ++++ K L + ++ + T
Sbjct: 11 ACPARCSCSGTEVNCWNKGIASVPAGIPN-NAQILYL-HVNQITK--LEPGVFDSLTQLT 66
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N + L N + LP F +L + L N + +P AF N K L +
Sbjct: 67 NLN--LHTNQLQALPAGVFDKLTQLIELTLYNNQLKSIPRGAFDNLKSLTHI 116
>gi|157822903|ref|NP_001102939.1| leucine-rich repeat transmembrane neuronal protein 2 precursor
[Rattus norvegicus]
gi|325530110|sp|D4A7P2.1|LRRT2_RAT RecName: Full=Leucine-rich repeat transmembrane neuronal protein 2;
AltName: Full=Leucine-rich repeat neuronal 2 protein;
Flags: Precursor
gi|149017203|gb|EDL76254.1| rCG49309 [Rattus norvegicus]
Length = 515
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 76/161 (47%), Gaps = 12/161 (7%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP CRC + C +G + VP + + L L N IT L FA++ +L
Sbjct: 29 ALGMACPPKCRCEKLLFYCDSQGFHSVPNATDKGSLGLSLRHNHITALERDQFASFSQLT 88
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICD 211
+ L NQIS V DAFQGL L L L++N + YLP+ F +L L+ L +S N
Sbjct: 89 WLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFN----- 143
Query: 212 CHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
LS LH P L + H++ ++ IP F
Sbjct: 144 -QLSSLH------PELFYGLRKLQTLHLRSNSLRTIPVRLF 177
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 24/258 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N + YLP+ F +L L+ L +S N LS LH P L + H
Sbjct: 116 LSSNKIFYLPNTTFTQLINLQNLDLSFN------QLSSLH------PELFYGLRKLQTLH 163
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL--------N 116
++ ++ IP F +E S G++ RE L N
Sbjct: 164 LRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLAR--NGFAGLIKLRELHLEHNQLTKIN 221
Query: 117 KVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
L + L L+ N I+ L + L ++DL+ N+I + + F+ + +L
Sbjct: 222 FAHFLRLSSLHTLFLQWNKISNLTCGMEWTWSTLEKLDLTGNEIKAIDLTVFETMPNLKI 281
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFA 235
L ++NN L L + + L L T+ +S N + C + L WL + R C +
Sbjct: 282 LLMDNNKLNSLDSKILSSLRSLTTVGLSGNLWECSPRVCALASWLGSFQGRWEHSILCHS 341
Query: 236 PSHIKGQNILDIPEHEFK 253
P H +G++ILD H F+
Sbjct: 342 PDHTQGEDILD-AVHGFQ 358
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL L N I LP F L+ +DLS NQ+S + + F GL+ L +L L +N+L +
Sbjct: 113 ELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTI 172
Query: 188 PDGVFAELFRLRTLRISEN 206
P +F + L L +S N
Sbjct: 173 PVRLFWDCRSLEFLDLSTN 191
>gi|50086933|gb|AAT70347.1| variable lymphocyte receptor [Petromyzon marinus]
Length = 270
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 14/169 (8%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDCR K VP +P T L L N IT+L P F + +L ++L
Sbjct: 21 ACPSQCSCSGTTVDCRSKRHASVPAAIPITTQRLWLSNNQITKLEPGVFDSLTQLTYLNL 80
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ++ + V F L +L LTL NN L +P G L L + + N + C+C +
Sbjct: 81 GGNQLTALPVGVFDRLVNLQELTLYNNQLKSIPRGASDNLKSLTHIYLFNNPWDCECSDI 140
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L W+ ++ + +++G +D KCSG+ R+
Sbjct: 141 LYLKNWIVQHASI---------MNLEGHGGVD----NVKCSGTDTPVRA 176
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ VDCR K VP +P T L +S +++ K+ + S +
Sbjct: 21 ACPSQCSCSGTTVDCRSKRHASVPAAIPITTQRL--WLSNNQITKLEPGVFDSLTQLTYL 78
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N L N +T LP F L+ + L N + +P A N K L +
Sbjct: 79 N----LGGNQLTALPVGVFDRLVNLQELTLYNNQLKSIPRGASDNLKSLTHI 126
>gi|26338353|dbj|BAC32862.1| unnamed protein product [Mus musculus]
Length = 515
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 76/161 (47%), Gaps = 12/161 (7%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP CRC + C +G + VP + + L L N IT L FA++ +L
Sbjct: 29 ALGMACPPKCRCEKLLFYCDSQGFHSVPNATDKGSLGLSLRHNHITALERDQFASFSQLT 88
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICD 211
+ L NQIS V DAFQGL L L L++N + YLP+ F +L L+ L +S N
Sbjct: 89 WLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFN----- 143
Query: 212 CHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
LS LH P L + H++ ++ IP F
Sbjct: 144 -QLSSLH------PELFYGLRKLQTLHLRSNSLRTIPVRLF 177
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 106/258 (41%), Gaps = 24/258 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N + YLP+ F +L L+ L +S N LS LH P L + H
Sbjct: 116 LSSNKIFYLPNTTFTQLINLQNLDLSFN------QLSSLH------PELFYGLRKLQTLH 163
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL--------N 116
++ ++ IP F +E S G++ RE L N
Sbjct: 164 LRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLAR--NGFAGLIKLRELHLEHNQLTKIN 221
Query: 117 KVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
L + L L+ N I+ L + L ++DL+ N+I + + F+ + +L
Sbjct: 222 FAHFLRLSSLHTLFLQWNKISNLTCGMDWTWSTLEKLDLTGNEIKAIDLTVFETMPNLKI 281
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFA 235
L ++NN L L + L L T+ +S N + C + L WL + R C +
Sbjct: 282 LLMDNNKLNSLDSKILNSLKSLTTVGLSGNLWECSPRVCALASWLGSFQGRWEHSILCHS 341
Query: 236 PSHIKGQNILDIPEHEFK 253
P H +G++ILD H F+
Sbjct: 342 PDHTQGEDILD-AVHGFQ 358
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL L N I LP F L+ +DLS NQ+S + + F GL+ L +L L +N+L +
Sbjct: 113 ELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTI 172
Query: 188 PDGVFAELFRLRTLRISEN 206
P +F + L L +S N
Sbjct: 173 PVRLFWDCRSLEFLDLSTN 191
>gi|62208215|gb|AAX77051.1| variable lymphocyte receptor [Ichthyomyzon fossor]
Length = 298
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C+ + L VP +P T L L N IT+L P F + L ++L
Sbjct: 21 ACPAQCSCSGTSVNCQGRSLTSVPAGIPTTTQNLNLHVNQITKLEPGVFDSLTALTFLNL 80
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
NQ++ ++ F L +L L LNNN LT LP GVF +L +L L + N
Sbjct: 81 GNNQLTALSTGVFDSLANLQRLWLNNNQLTSLPTGVFDKLTQLTHLVLDTNQL 133
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C+ V+C+ + L VP +P T L V+ I +++ + S + F
Sbjct: 21 ACPAQCSCSGTSVNCQGRSLTSVPAGIPTTTQNLNLHVNQITKLEPGVFDSLTALTF--- 77
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N +T L F + L+R+ L N +T LP F +L +
Sbjct: 78 ----LNLGNNQLTALSTGVFDSLANLQRLWLNNNQLTSLPTGVFDKLTQLTHL 126
>gi|334335488|ref|XP_001372031.2| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 1-like [Monodelphis domestica]
Length = 1088
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 69/154 (44%), Gaps = 28/154 (18%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQIS--------------------------- 161
LRL N I + AF K LR +DL+ N+IS
Sbjct: 335 LRLSHNSINHIAEGAFKGLKNLRVLDLNHNEISGTIEDTNGAFTGLDSLNKLTLFGNKIK 394
Query: 162 KVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL 221
VA AF GL+ L L L N + + FA++ L+ L IS +SF+CDC L W+ +WL
Sbjct: 395 SVAKRAFSGLEGLEHLNLGENAIRSIQFDAFAKMKNLQELHISSDSFLCDCQLKWVPQWL 454
Query: 222 -KRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKC 254
R + + C P +KGQ+I +P F C
Sbjct: 455 MGRGLQTTVVATCAHPESLKGQSIFSVPPESFVC 488
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAPS 63
L N + + FA++ L+ L IS +SF+CDC L W+ +WL R + + C P
Sbjct: 412 LGENAIRSIQFDAFAKMKNLQELHISSDSFLCDCQLKWVPQWLMGRGLQTTVVATCAHPE 471
Query: 64 HIKGQNILDIPEHEFKC 80
+KGQ+I +P F C
Sbjct: 472 SLKGQSIFSVPPESFVC 488
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 133 QNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
+N IT+LP KAF RL +++L++N+I + FQGL SL L L NN++ L DG F
Sbjct: 196 KNRITQLPVKAF-KLPRLTQLELNRNRIRLIEGLTFQGLDSLDVLKLQRNNISKLTDGAF 254
Query: 193 AELFRLRTLRISENSF 208
L ++ L + NS
Sbjct: 255 WGLSKMEVLHLEYNSL 270
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 136/335 (40%), Gaps = 41/335 (12%)
Query: 97 CPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLS 156
C C C ++DC GL +P +P T L L N +TE+ P AF + L+ + L+
Sbjct: 40 CASNCTCTGALLDCSGLGLAALPRDIPSWTVTLNLSNNKLTEIDPAAFEDLVNLQEVHLN 99
Query: 157 KNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENS--------F 208
N+++ + + L SL L +N + + L+ L +S N+ F
Sbjct: 100 NNELTIIPALGAASSRIL-SLYLQHNRIRNVEGSQLKPYVSLQMLDLSSNNITEVRSSCF 158
Query: 209 ICDCHLSWLHRWLKRYPRL--GLY---TKCFAPSHIKGQNILDIPEHEFKCSG-SSME-T 261
H+ L+ R L G + ++ + I +P FK + +E
Sbjct: 159 PRGLHIKELYLGSNRISTLEPGAFDSLSRSLLTLRLSKNRITQLPVKAFKLPRLTQLELN 218
Query: 262 RSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 321
R++I E T F +S V K ++ + D GL+K+ +L
Sbjct: 219 RNRIRLIEGLT-FQGLDSLDVLKLQRNNISK------------LTDGAFWGLSKMEVLHL 265
Query: 322 EATTELTYMVSIDRVDKVLLYS-YISNNFKRWTNRS-----RRLEQ-----NDITELPPK 370
E + LT + S L+ Y+SNN NR ++L++ N++T L +
Sbjct: 266 EYNS-LTEVNSGSLYGLTALHQLYLSNNSISRINRDGWSFCQKLQELILSFNNLTRLDEE 324
Query: 371 AFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ A+ L+ +RL N I + AF K LR +
Sbjct: 325 SLADLSSLQILRLSHNSINHIAEGAFKGLKNLRVL 359
>gi|89179300|ref|NP_001034768.1| leucine-rich repeat LGI family member 3 precursor [Danio rerio]
gi|34733922|gb|AAQ81876.1| LGI3 [Danio rerio]
gi|190340173|gb|AAI62727.1| Leucine-rich repeat LGI family, member 3 [Danio rerio]
Length = 551
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 83/192 (43%), Gaps = 26/192 (13%)
Query: 87 PTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFAN 146
P + P CP C C C + + +P P L + TE+P AF++
Sbjct: 31 PGRKAPKSPRCPATCSCTKDSAFCVDTKV--IPKSFPTGIISLTMVNAAFTEIPEGAFSH 88
Query: 147 YKRLRRIDLSKNQISKVAVDAF------------------------QGLKSLTSLTLNNN 182
L+ + L+ N S ++ DAF +GLKSLT L+L+NN
Sbjct: 89 MHLLQFLLLNSNTFSVISDDAFSGLGHLQYLFIENNDIQALSKHTFRGLKSLTHLSLSNN 148
Query: 183 NLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQ 242
NL LP +F L L L + NSF CDC + WL W+++ C +P +G+
Sbjct: 149 NLQVLPRELFKHLDILTDLDLRGNSFRCDCKIKWLVDWMEKTNTSVPPIYCASPFEFQGR 208
Query: 243 NILDIPEHEFKC 254
I ++ +F C
Sbjct: 209 RIHELTPRDFNC 220
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L+NNNL LP +F L L L + NSF CDC + WL W+++ C +P
Sbjct: 144 SLSNNNLQVLPRELFKHLDILTDLDLRGNSFRCDCKIKWLVDWMEKTNTSVPPIYCASPF 203
Query: 64 HIKGQNILDIPEHEFKC 80
+G+ I ++ +F C
Sbjct: 204 EFQGRRIHELTPRDFNC 220
>gi|402859813|ref|XP_003894332.1| PREDICTED: leucine-rich repeat and transmembrane domain-containing
protein 1 [Papio anubis]
Length = 345
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 89/211 (42%), Gaps = 53/211 (25%)
Query: 96 SCPHPCRC--ADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRI 153
CP CRC + VDC ++GL ++P LP T L L+ N I LP AF + L +
Sbjct: 20 GCPDKCRCHSSTNFVDCSQQGLAEIPSHLPPQTRTLHLQDNQIHHLPAFAFRSVPWLTAL 79
Query: 154 DLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENS------ 207
+LS N +S +A AF GL+ L L L N+L L +F L +LR L +S N+
Sbjct: 80 NLSNNSLSDLAPGAFHGLQHLQVLNLTQNSLLSLESRLFHSLPQLRELDLSSNNISHLPT 139
Query: 208 ------------------------------------------FICDCHLSWLHRWLKRYP 225
+ C+CHL L WL+++
Sbjct: 140 SLGETWENLTILAVQQNQLQQLDRALLESMPSVRLLFLKDNLWKCNCHLLGLKLWLEKFI 199
Query: 226 RLGLYTK---CFAPSHIKGQNILDIPEHEFK 253
G T C +P KG+++L IP ++
Sbjct: 200 YKGGITDGVICGSPDTWKGKDLLRIPHELYQ 230
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 8/114 (7%)
Query: 294 SCPHPCRC--ADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
CP CRC + VDC ++GL ++P LP T T + +++ + +++ S +
Sbjct: 20 GCPDKCRCHSSTNFVDCSQQGLAEIPSHLPPQTR--TLHLQDNQIHHLPAFAFRSVPWLT 77
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N L N +++L P AF + L+ + L QN + L + F + +LR +
Sbjct: 78 ALN----LSNNSLSDLAPGAFHGLQHLQVLNLTQNSLLSLESRLFHSLPQLREL 127
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTK---CF 60
+ N L L + + +R L + +N + C+CHL L WL+++ G T C
Sbjct: 152 AVQQNQLQQLDRALLESMPSVRLLFLKDNLWKCNCHLLGLKLWLEKFIYKGGITDGVICG 211
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEKPTGECA 92
+P KG+++L IP HE P+ P E +
Sbjct: 212 SPDTWKGKDLLRIP-HELYQPCPLAAPDPESS 242
>gi|359279868|ref|NP_001240656.1| relaxin receptor 1 isoform 2 [Homo sapiens]
gi|194378206|dbj|BAG57853.1| unnamed protein product [Homo sapiens]
Length = 784
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 65/111 (58%), Gaps = 1/111 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
S P C C +DC E L VP + T + L+ N I +LPP F NY L+++ L
Sbjct: 126 SVPVQCLCQGLELDCDETNLRAVPSV-SSNVTAMSLQWNLIRKLPPDCFKNYHDLQKLYL 184
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
N+I+ +++ AF+GL SLT L L++N +T+L GVF +L RL L I +N
Sbjct: 185 QNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDN 235
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 81/202 (40%), Gaps = 35/202 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N +T+L GVF +L RL L I +N HLS + +P
Sbjct: 208 LSHNRITFLKPGVFEDLHRLEWLIIEDN------HLSRI-----------------SPPT 244
Query: 65 IKGQN--ILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCRE-KGLNKVPIL 121
G N IL + + P +P C H R ++ L + +
Sbjct: 245 FYGLNSLILLVLMNNVLTRLP---------DKPLCQHMPRLHWLDLEGNHIHNLRNLTFI 295
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
T L + +N I L FA ++L +DL N+I + F+ LK L+ L L+
Sbjct: 296 SCSNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSY 355
Query: 182 NNLTYLPDGVFAELFRLRTLRI 203
N + + F L +L++L +
Sbjct: 356 NPIQKIQANQFDYLVKLKSLSL 377
>gi|355690867|gb|AER99296.1| G protein-coupled receptor 125 [Mustela putorius furo]
Length = 128
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 63/124 (50%)
Query: 131 LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDG 190
L N I+ + P AF L+R+DL+ N+I + D F+GL +L L L+ N + L G
Sbjct: 2 LRNNLISSIDPGAFWGLSSLKRLDLTNNRIGCLNADIFRGLTNLVRLNLSGNLFSSLSQG 61
Query: 191 VFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEH 250
F L LR+L +CDC++ W+HRW+K T+C P ++ Q + + +
Sbjct: 62 TFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCVYPKSLQAQPVTGVKQE 121
Query: 251 EFKC 254
C
Sbjct: 122 LLTC 125
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N + L G F L LR+L +CDC++ W+HRW+K T+C P
Sbjct: 50 LSGNLFSSLSQGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCVYPKS 109
Query: 65 IKGQNILDIPEHEFKCSGP 83
++ Q + + + C P
Sbjct: 110 LQAQPVTGVKQELLTCDPP 128
>gi|284010916|dbj|BAI66933.1| variable lymphocyte receptor B [Eptatretus burgeri]
Length = 235
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 57/111 (51%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C KGL VP +P +TT L+L N + LP F L +DL
Sbjct: 23 ACPSRCSCSGTTVNCYNKGLTSVPSGIPSSTTNLQLHVNKLQSLPSGVFDKLTSLTFLDL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
N+ + F L LT L L+NN L +PDGVF +L +L L + N
Sbjct: 83 GANKFQSIPHGVFDKLTQLTILYLHNNQLQSIPDGVFDKLTQLTQLSLKNN 133
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C KGL VP +P +TT L V+ L S S F + T
Sbjct: 23 ACPSRCSCSGTTVNCYNKGLTSVPSGIPSSTTNLQLHVNK-------LQSLPSGVFDKLT 75
Query: 354 NRS-RRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L N +P F +L + L N + +P F +L ++
Sbjct: 76 SLTFLDLGANKFQSIPHGVFDKLTQLTILYLHNNQLQSIPDGVFDKLTQLTQL 128
>gi|344281640|ref|XP_003412586.1| PREDICTED: LOW QUALITY PROTEIN: G-protein coupled receptor 124-like
[Loxodonta africana]
Length = 1344
Score = 82.4 bits (202), Expect = 3e-13, Method: Composition-based stats.
Identities = 44/131 (33%), Positives = 68/131 (51%), Gaps = 1/131 (0%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L L N I+ + P AF L+R+DLS N+I + + FQGL L L ++ N + L
Sbjct: 111 KLDLRNNVISTVQPGAFLGLGELKRLDLSNNRIGCLTSETFQGLPRLLRLNISGNIFSSL 170
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFAPSHIKGQNILD 246
GVF EL L+ + CDCHL WL W + + +L T+C PS + + +
Sbjct: 171 QPGVFDELPALKVVDFGTEFLTCDCHLRWLLSWARNHSLQLSERTRCSYPSALHTRALGG 230
Query: 247 IPEHEFKCSGS 257
+ E + +C G+
Sbjct: 231 LQEAQLRCEGA 241
Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 1 MPRTL----NNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGL 55
+PR L + N + L GVF EL L+ + CDCHL WL W + + +L
Sbjct: 154 LPRLLRLNISGNIFSSLQPGVFDELPALKVVDFGTEFLTCDCHLRWLLSWARNHSLQLSE 213
Query: 56 YTKCFAPSHIKGQNILDIPEHEFKCSGPVE 85
T+C PS + + + + E + +C G +E
Sbjct: 214 RTRCSYPSALHTRALGGLQEAQLRCEGALE 243
>gi|119928571|dbj|BAF43110.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 173
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 67/133 (50%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C+ + L VP +P T L L N T+L P F L+++ L
Sbjct: 11 ACPARCSCSGTDVECQSRSLASVPAGIPTTTQRLWLSNNQFTKLDPGVFDRLVNLQQLHL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
NQ+S + V F L LT L L+ N L +PDG FA L L + + N + C C +
Sbjct: 71 GDNQLSALPVGVFDKLIQLTHLALDVNQLKSVPDGAFARLSSLTHVWLHTNPWDCQCTDI 130
Query: 215 SWLHRWLKRYPRL 227
+L W+ ++ +
Sbjct: 131 LYLSGWVAQHSGI 143
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 48/122 (39%), Gaps = 26/122 (21%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNN----- 348
+CP C C+ V+C+ + L VP +P T L ++SNN
Sbjct: 11 ACPARCSCSGTDVECQSRSLASVPAGIPTTTQRL----------------WLSNNQFTKL 54
Query: 349 ----FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLR 403
F R N + L N ++ LP F +L + L+ N + +P AFA L
Sbjct: 55 DPGVFDRLVNLQQLHLGDNQLSALPVGVFDKLIQLTHLALDVNQLKSVPDGAFARLSSLT 114
Query: 404 RM 405
+
Sbjct: 115 HV 116
>gi|28972213|dbj|BAC65560.1| mKIAA0416 protein [Mus musculus]
Length = 528
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 76/161 (47%), Gaps = 12/161 (7%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP CRC + C +G + VP + + L L N IT L FA++ +L
Sbjct: 42 ALGMACPPKCRCEKLLFYCDSQGFHSVPNATDKGSLGLSLRHNHITALERDQFASFSQLT 101
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICD 211
+ L NQIS V DAFQGL L L L++N + YLP+ F +L L+ L +S N
Sbjct: 102 WLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFN----- 156
Query: 212 CHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
LS LH P L + H++ ++ IP F
Sbjct: 157 -QLSSLH------PELFYGLRKLQTLHLRSNSLRTIPVRLF 190
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 106/258 (41%), Gaps = 24/258 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N + YLP+ F +L L+ L +S N LS LH P L + H
Sbjct: 129 LSSNKIFYLPNTTFTQLINLQNLDLSFN------QLSSLH------PELFYGLRKLQTLH 176
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL--------N 116
++ ++ IP F +E S G++ RE L N
Sbjct: 177 LRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLAR--NGFAGLIKLRELHLEHNQLTKIN 234
Query: 117 KVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
L + L L+ N I+ L + L ++DL+ N+I + + F+ + +L
Sbjct: 235 FAHFLRLSSLHTLFLQWNKISNLTCGMDWTWSTLEKLDLTGNEIKAIDLTVFETMPNLKI 294
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFA 235
L ++NN L L + L L T+ +S N + C + L WL + R C +
Sbjct: 295 LLMDNNKLNSLDSKILNSLKSLTTVGLSGNLWECSPRVCALASWLGSFQGRWEHSILCHS 354
Query: 236 PSHIKGQNILDIPEHEFK 253
P H +G++ILD H F+
Sbjct: 355 PDHTQGEDILD-AVHGFQ 371
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL L N I LP F L+ +DLS NQ+S + + F GL+ L +L L +N+L +
Sbjct: 126 ELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTI 185
Query: 188 PDGVFAELFRLRTLRISEN 206
P +F + L L +S N
Sbjct: 186 PVRLFWDCRSLEFLDLSTN 204
>gi|431915663|gb|ELK15996.1| Leucine-rich repeat-containing G-protein coupled receptor 4
[Pteropus alecto]
Length = 954
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 64/122 (52%), Gaps = 3/122 (2%)
Query: 86 KPTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAF 144
+P+G AA P C PC C D VDC KGL VP L T L + N+IT+LP AF
Sbjct: 20 EPSG--AAPPLCAAPCSCDGDRRVDCSGKGLTTVPEGLSAFTQALDISMNNITQLPEDAF 77
Query: 145 ANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRIS 204
N+ L + L+ N +S + A GLK L LTL NN L +P L L++LR+
Sbjct: 78 KNFPFLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLD 137
Query: 205 EN 206
N
Sbjct: 138 AN 139
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 53/123 (43%), Gaps = 33/123 (26%)
Query: 284 KPTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLY 342
+P+G AA P C PC C D VDC KGL VP E + T + I
Sbjct: 20 EPSG--AAPPLCAAPCSCDGDRRVDCSGKGLTTVP----EGLSAFTQALDI--------- 64
Query: 343 SYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
N+IT+LP AF N+ L +RL ND++ + PKA + K L
Sbjct: 65 -----------------SMNNITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKEL 107
Query: 403 RRM 405
+ +
Sbjct: 108 KVL 110
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 66/150 (44%), Gaps = 10/150 (6%)
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADG-----IVDCREKGLNKVP 119
I NI +PE FK + P + + S HP + G ++ + L VP
Sbjct: 64 ISMNNITQLPEDAFK-NFPFLEELRLAGNDLSFIHP-KALSGLKELKVLTLQNNQLKTVP 121
Query: 120 ---ILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
I A LRL+ N IT +P +F +LR + L N +++V V L +L +
Sbjct: 122 SEAIRGLSALQSLRLDANHITSVPEDSFEGLAQLRHLWLDDNSLTEVPVHPLSNLPTLQA 181
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
LTL N ++ +PD F L L L + N
Sbjct: 182 LTLALNKISSIPDFAFTNLSSLVVLHLHNN 211
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 90/219 (41%), Gaps = 39/219 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
++ NN+T LP+ F L LR++ N LS++H P+ A S
Sbjct: 64 ISMNNITQLPEDAFKNFPFLEELRLAGND------LSFIH------PK--------ALSG 103
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECA-------AEPSCPHPCRCADGIVDCR-----E 112
+K +L + ++ K + P E G A A P +G+ R +
Sbjct: 104 LKELKVLTLQNNQLK-TVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLAQLRHLWLDD 162
Query: 113 KGLNKVPIL----LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAF 168
L +VP+ LP L L N I+ +P AF N L + L N+I + F
Sbjct: 163 NSLTEVPVHPLSNLP-TLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGRHCF 221
Query: 169 QGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENS 207
GL +L +L LN NNL P + A L L+ L NS
Sbjct: 222 DGLDNLETLDLNYNNLGEFPQAIKA-LPSLKELLFHSNS 259
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N+I +LP +F L I L +NQI ++ FQGL SL L L+ N + +
Sbjct: 348 LDLSYNNIKDLP--SFNGCHALEEISLQRNQIHQIKEGTFQGLISLRILDLSRNLIHEIH 405
Query: 189 DGVFAELFRLRTLRISEN 206
D FA+L + L IS N
Sbjct: 406 DRAFAKLGSITNLDISFN 423
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
A E+ L++N I ++ F LR +DLS+N I ++ AF L S+T+L ++ N
Sbjct: 365 HALEEISLQRNQIHQIKEGTFQGLISLRILDLSRNLIHEIHDRAFAKLGSITNLDISFNE 424
Query: 184 LTYLP 188
LT P
Sbjct: 425 LTSFP 429
>gi|397503984|ref|XP_003822591.1| PREDICTED: relaxin receptor 1 isoform 4 [Pan paniscus]
Length = 806
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 65/111 (58%), Gaps = 1/111 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
S P C C +DC E L VP + T + L+ N I +LPP F NY L+++ L
Sbjct: 148 SVPVQCLCQGLELDCDETNLRAVPSV-SSNVTAMSLQWNLIRKLPPDCFKNYHDLQKLYL 206
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
N+I+ +++ AF+GL SLT L L++N +T+L GVF +L RL L I +N
Sbjct: 207 QNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDN 257
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 81/202 (40%), Gaps = 35/202 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N +T+L GVF +L RL L I +N HLS + +P
Sbjct: 230 LSHNRITFLKPGVFEDLHRLEWLIIEDN------HLSRI-----------------SPPT 266
Query: 65 IKGQN--ILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCRE-KGLNKVPIL 121
G N IL + + P +P C H R ++ L + +
Sbjct: 267 FYGLNSLILLVLMNNVLTRLP---------DKPLCQHMPRLHWLDLEGNHIHNLRNLTFI 317
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
T L + +N I L FA ++L +DL N+I + F+ LK L+ L L+
Sbjct: 318 SCSNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSY 377
Query: 182 NNLTYLPDGVFAELFRLRTLRI 203
N + + F L +L++L +
Sbjct: 378 NPIQKIQANQFDYLVKLKSLSL 399
>gi|348508736|ref|XP_003441909.1| PREDICTED: leucine-rich glioma-inactivated protein 1-like
[Oreochromis niloticus]
Length = 550
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 79/209 (37%), Gaps = 26/209 (12%)
Query: 89 GECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYK 148
G +P CPH C C C + + VP P L ++ E+ +FA+
Sbjct: 33 GRRVRQPRCPHGCTCTKDNALC--ESVRSVPHTFPSDVVSLSFVKSGFNEITGGSFAHTP 90
Query: 149 RLRRIDLSKNQISKVAVDAFQGL------------------------KSLTSLTLNNNNL 184
L + + N + DAFQGL K+L L+L NNL
Sbjct: 91 TLHLLLFTANSFDLIDEDAFQGLPHLEYLFIENNKIAEISPYAFRGLKALVHLSLAYNNL 150
Query: 185 TYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNI 244
LP VF + L + + N+ ICDC L WL W+ C P +G+ I
Sbjct: 151 ETLPKDVFKGMDALTKVDLRGNNLICDCKLKWLVEWMHHTNATLDQIHCSGPPIHQGKKI 210
Query: 245 LDIPEHEFKCSGSSMETRSKIYREECSTD 273
D+ H F C + T + E S D
Sbjct: 211 NDLLPHSFDCIAAEFATYQSLKFESISVD 239
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L NNL LP VF + L + + N+ ICDC L WL W+ C P
Sbjct: 144 SLAYNNLETLPKDVFKGMDALTKVDLRGNNLICDCKLKWLVEWMHHTNATLDQIHCSGPP 203
Query: 64 HIKGQNILDIPEHEFKC 80
+G+ I D+ H F C
Sbjct: 204 IHQGKKINDLLPHSFDC 220
>gi|332820495|ref|XP_001144181.2| PREDICTED: relaxin receptor 1 isoform 7 [Pan troglodytes]
Length = 806
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 65/111 (58%), Gaps = 1/111 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
S P C C +DC E L VP + T + L+ N I +LPP F NY L+++ L
Sbjct: 148 SVPVQCLCQGLELDCDETNLRAVPSV-SSNVTAMSLQWNLIRKLPPDCFKNYHDLQKLYL 206
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
N+I+ +++ AF+GL SLT L L++N +T+L GVF +L RL L I +N
Sbjct: 207 QNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDN 257
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 81/202 (40%), Gaps = 35/202 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N +T+L GVF +L RL L I +N HLS + +P
Sbjct: 230 LSHNRITFLKPGVFEDLHRLEWLIIEDN------HLSRI-----------------SPPT 266
Query: 65 IKGQN--ILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCRE-KGLNKVPIL 121
G N IL + + P +P C H R ++ L + +
Sbjct: 267 FYGLNSLILLVLMNNVLTRLP---------DKPLCQHMPRLHWLDLEGNHIHNLRNLTFI 317
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
T L + +N I L FA ++L +DL N+I + F+ LK L+ L L+
Sbjct: 318 SCSNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSY 377
Query: 182 NNLTYLPDGVFAELFRLRTLRI 203
N + + F L +L++L +
Sbjct: 378 NPIQKIQANQFDYLVKLKSLSL 399
>gi|410897365|ref|XP_003962169.1| PREDICTED: leucine-rich repeat-containing protein 3-like [Takifugu
rubripes]
Length = 254
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 72/136 (52%), Gaps = 7/136 (5%)
Query: 96 SCPHPCRCAD----GIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
+CP C C + +V C +GL+K+P LP T L L N IT +P AF L+
Sbjct: 26 ACPSSCHCIEKSGMTVVQCISRGLDKIPSDLPRDTVVLLLGSNHITHIPNHAFRELHYLQ 85
Query: 152 RIDLSKNQISKVAVDAFQGLK-SLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFIC 210
+DLS N I V V AFQG+ SL L L+NN + +P F+ L R R + +S N + C
Sbjct: 86 ELDLSNNDIDTVEVGAFQGVSDSLHVLDLSNNRIQSVPKEAFSHL-RAR-ISLSNNPWFC 143
Query: 211 DCHLSWLHRWLKRYPR 226
+C L + R L+ P
Sbjct: 144 ECTLQEVLRELQLDPE 159
>gi|281347987|gb|EFB23571.1| hypothetical protein PANDA_001367 [Ailuropoda melanoleuca]
Length = 343
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 92/206 (44%), Gaps = 53/206 (25%)
Query: 96 SCPHPCRC--ADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRI 153
CP CRC + VDC +GL +VP+ LP T L L+ N + +LP AF++ +LR +
Sbjct: 18 GCPEKCRCHSSSHSVDCSRQGLAQVPLGLPPQTLTLHLQDNQLHQLPAFAFSSVPQLRTL 77
Query: 154 DLSKNQISKVAVDAFQGLKSLT------------------------SLTLNNNNLTYLPD 189
+L N +S +A F GL+ L L L++NN+++LP
Sbjct: 78 NLRNNSLSHLAPGVFHGLRRLEVLNLTQNSLHSLESRLFHSLPRLRELDLSSNNISHLPA 137
Query: 190 G---------VFA---------------ELFRLRTLRISENSFICDCHLSWLHRWLKRYP 225
VFA + +R L + +N + C+CHL L WL+++
Sbjct: 138 SPGRPWENLTVFAVQQNQLRQLDRALLESMPSVRLLFLKDNLWQCNCHLLSLKLWLEKFI 197
Query: 226 RLGLYTK---CFAPSHIKGQNILDIP 248
G T C +P KG+ +L IP
Sbjct: 198 YKGGVTDSVICVSPDTWKGEELLKIP 223
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 8/114 (7%)
Query: 294 SCPHPCRC--ADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
CP CRC + VDC +GL +VP+ LP T LT + +++ ++ +++ S R
Sbjct: 18 GCPEKCRCHSSSHSVDCSRQGLAQVPLGLPPQT--LTLHLQDNQLHQLPAFAFSSVPQLR 75
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N L N ++ L P F +RL + L QN + L + F + RLR +
Sbjct: 76 TLN----LRNNSLSHLAPGVFHGLRRLEVLNLTQNSLHSLESRLFHSLPRLREL 125
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTK---CF 60
+ N L L + + +R L + +N + C+CHL L WL+++ G T C
Sbjct: 150 AVQQNQLRQLDRALLESMPSVRLLFLKDNLWQCNCHLLSLKLWLEKFIYKGGVTDSVICV 209
Query: 61 APSHIKGQNILDIP 74
+P KG+ +L IP
Sbjct: 210 SPDTWKGEELLKIP 223
>gi|88900439|ref|NP_001034731.1| leucine-rich repeat LGI family, member 2b precursor [Danio rerio]
gi|34733926|gb|AAQ81878.1| LGI2B [Danio rerio]
Length = 545
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 82/172 (47%)
Query: 106 GIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAV 165
IV+C +N+ L + L L N +E+ AF+ L + + N+I ++
Sbjct: 67 SIVNCSFPEINEAMFSLMPSLQLLLLSSNSFSEIKEDAFSGLPHLEYLFIEGNKIEEINK 126
Query: 166 DAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP 225
AF+GL+ +T L+L NNNL LP +F+EL L L + N F CDC WL WLKR
Sbjct: 127 YAFRGLRDVTHLSLANNNLKSLPRALFSELRSLIELDLRGNMFHCDCESMWLMLWLKRSN 186
Query: 226 RLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPY 277
C +PS +KG + D+PE KC + + + S D +
Sbjct: 187 ATISDVYCASPSAMKGVLLKDVPEKHSKCVSTDFVQHQILNTQSMSADIFTH 238
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 41/77 (53%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L NNNL LP +F+EL L L + N F CDC WL WLKR C +PS
Sbjct: 139 SLANNNLKSLPRALFSELRSLIELDLRGNMFHCDCESMWLMLWLKRSNATISDVYCASPS 198
Query: 64 HIKGQNILDIPEHEFKC 80
+KG + D+PE KC
Sbjct: 199 AMKGVLLKDVPEKHSKC 215
>gi|335293499|ref|XP_003356982.1| PREDICTED: relaxin receptor 1-like [Sus scrofa]
Length = 780
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 67/122 (54%), Gaps = 2/122 (1%)
Query: 85 EKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAF 144
E T EC S P C C +DC E L VP + T + L+ N I +LPP F
Sbjct: 111 EAETSECLV-GSVPMQCLCRGLELDCDETNLRAVPSV-SSNVTLMSLQWNLIRKLPPDGF 168
Query: 145 ANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRIS 204
Y L+++ L N+I V+V AF+GL SLT L L++N +T+L GVF +L RL L I
Sbjct: 169 KKYHDLQKLCLQNNKIRSVSVYAFRGLYSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIE 228
Query: 205 EN 206
+N
Sbjct: 229 DN 230
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 79/201 (39%), Gaps = 33/201 (16%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N +T+L GVF +L RL L I +N L R L Y
Sbjct: 203 LSHNRITFLKPGVFEDLHRLEWLIIEDNH-------------LNRISPLTFYGLNSLILL 249
Query: 65 IKGQNILD-IPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCRE-KGLNKVPILL 122
+ N+L +P+ +P C H R + L + +
Sbjct: 250 VLMNNVLTHLPD------------------KPLCQHMPRLHWLDFEGNHIHNLRNLTFIS 291
Query: 123 PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNN 182
T L + +N I L FA ++L +DL N+I ++ F+ LK L+ L L+ N
Sbjct: 292 CSNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLSPHVFKDLKELSQLNLSYN 351
Query: 183 NLTYLPDGVFAELFRLRTLRI 203
+ + F L +L++L +
Sbjct: 352 PIQKIQANQFDYLVKLKSLSL 372
>gi|334312048|ref|XP_001381848.2| PREDICTED: G-protein coupled receptor 124-like [Monodelphis
domestica]
Length = 1338
Score = 82.4 bits (202), Expect = 4e-13, Method: Composition-based stats.
Identities = 47/148 (31%), Positives = 76/148 (51%), Gaps = 6/148 (4%)
Query: 111 REKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQG 170
R + +P+L +L L+ N I+ + P AF L+R+DLS N+I ++ AFQG
Sbjct: 96 RNGSFSGLPML-----EKLDLKNNLISTVHPGAFLGLGELKRLDLSNNRIGCLSSGAFQG 150
Query: 171 LKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGL 229
L +L L ++ N + LP GVF EL L+ + CDC L W+ W + + +L
Sbjct: 151 LSNLLRLNMSGNIFSNLPAGVFDELPALKVVDFGTEFLTCDCRLRWVLPWARNHSVQLSE 210
Query: 230 YTKCFAPSHIKGQNILDIPEHEFKCSGS 257
T C PS + Q + + + + C+G+
Sbjct: 211 RTLCAYPSSLHAQALRGLQDTQLHCAGA 238
Score = 48.1 bits (113), Expect = 0.008, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFAPS 63
++ N + LP GVF EL L+ + CDC L W+ W + + +L T C PS
Sbjct: 159 MSGNIFSNLPAGVFDELPALKVVDFGTEFLTCDCRLRWVLPWARNHSVQLSERTLCAYPS 218
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ Q + + + + C+G +E
Sbjct: 219 SLHAQALRGLQDTQLHCAGALE 240
>gi|449270836|gb|EMC81484.1| Leucine-rich repeat LGI family member 3 [Columba livia]
Length = 534
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 78/183 (42%), Gaps = 20/183 (10%)
Query: 106 GIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAV 165
+ RE +P L L L N T + AF L+ + + N I ++
Sbjct: 70 AFTELREAAFAHIPSL-----QFLLLNSNKFTLIGDDAFTGLSHLQYLFIENNDIQALSK 124
Query: 166 DAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP 225
F+GLKSLT L+L NNNL LP +F L L L + N+ CDC + WL WL+
Sbjct: 125 ATFRGLKSLTHLSLANNNLQTLPRDLFKPLDILSDLDLRGNTLACDCKIKWLVEWLESTN 184
Query: 226 RLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKP 285
T C +P +GQ I D+ +F+C +TDF + P +
Sbjct: 185 TTVPATFCSSPGQFEGQRIRDLALGDFQC---------------ITTDFVVHQVLPFQAV 229
Query: 286 TGE 288
+ E
Sbjct: 230 SAE 232
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 39/77 (50%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L NNNL LP +F L L L + N+ CDC + WL WL+ T C +P
Sbjct: 137 SLANNNLQTLPRDLFKPLDILSDLDLRGNTLACDCKIKWLVEWLESTNTTVPATFCSSPG 196
Query: 64 HIKGQNILDIPEHEFKC 80
+GQ I D+ +F+C
Sbjct: 197 QFEGQRIRDLALGDFQC 213
>gi|119926495|dbj|BAF43272.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 178
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C KGL VP +P T L L N IT+L F + +L ++L
Sbjct: 11 ACPARCSCSGTEVNCWSKGLASVPAGIPTTTQTLYLSSNQITKLELGVFDSLTQLTNLNL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ++ + F L +L L+L NN L +P G F L L + + N + C C +
Sbjct: 71 HTNQLTALPEGVFDRLVNLQQLSLYNNQLKSIPRGAFDNLKSLTHIWLYNNPWDCACSDI 130
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L RW+ ++P + ++ N ++ +CSG++ R+
Sbjct: 131 LYLSRWISQHPGV-----------VRDLNSYNVNPDSARCSGTNTPVRA 168
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C KGL VP +P TT T +S +++ K+ L + ++ + T
Sbjct: 11 ACPARCSCSGTEVNCWSKGLASVPAGIP--TTTQTLYLSSNQITKLELGVF--DSLTQLT 66
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N + L N +T LP F L+++ L N + +P AF N K L +
Sbjct: 67 NLN--LHTNQLTALPEGVFDRLVNLQQLSLYNNQLKSIPRGAFDNLKSLTHI 116
>gi|431899818|gb|ELK07765.1| Leucine-rich repeat and immunoglobulin-like domains protein 1
[Pteropus alecto]
Length = 1036
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 65/130 (50%), Gaps = 4/130 (3%)
Query: 129 LRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLT 185
L L+ N+I+ E AF L ++ L N+I VA AF GL L L L N +
Sbjct: 360 LDLDHNEISGTIEDTSGAFTGLDSLSKLTLFGNKIKSVAKRAFLGLDGLEHLNLGENAIR 419
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW-LKRYPRLGLYTKCFAPSHIKGQNI 244
+ F ++ L+ LRIS +SF+CDC L WL W L R + + C P +KGQ+I
Sbjct: 420 SVQFDAFVKMKNLKELRISSDSFLCDCQLKWLPPWLLGRMLQAFVTATCAHPESLKGQSI 479
Query: 245 LDIPEHEFKC 254
+P F C
Sbjct: 480 FSVPSESFVC 489
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 133 QNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
+N IT+LP KAF RL ++DL++N+I + FQGL SL L L NN++ L DG F
Sbjct: 197 KNRITQLPVKAF-KLPRLTQLDLNRNRIRLIEGLTFQGLDSLEVLKLQRNNISKLTDGAF 255
Query: 193 AELFRLRTLRISENSFI 209
L ++ L + NS +
Sbjct: 256 WGLSKMHVLHLESNSLV 272
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW-LKRYPRLGLYTKCFAPS 63
L N + + F ++ L+ LRIS +SF+CDC L WL W L R + + C P
Sbjct: 413 LGENAIRSVQFDAFVKMKNLKELRISSDSFLCDCQLKWLPPWLLGRMLQAFVTATCAHPE 472
Query: 64 HIKGQNILDIPEHEFKC 80
+KGQ+I +P F C
Sbjct: 473 SLKGQSIFSVPSESFVC 489
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Query: 106 GIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAV 165
+DC +GL +P LP T L L N ++E+ P F + L+ + L+ N+++ A+
Sbjct: 50 DSLDCGGRGLAALPGDLPAWTRSLNLSYNKLSEIDPSGFEDLPNLQEVYLNNNELT--AI 107
Query: 166 DAFQGLKS-LTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ S + SL L +N + + L L +S N+
Sbjct: 108 PSLGAASSRIGSLFLQHNKIRGVEGSQLKAYLSLEVLDLSWNNI 151
>gi|76161611|gb|ABA39902.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 168
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C++K L VP +P T L L N IT+L P F + +L ++L
Sbjct: 1 ACPSQCSCSGTEVHCQKKSLASVPAGIPTTTQVLYLHVNQITKLEPGVFDSLTQLTYLNL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
+ NQ++ + V F L LT L+L+ N L +P G F L L + + N + C+C +
Sbjct: 61 AVNQLTALPVGVFDKLTKLTHLSLHTNQLKSIPRGAFDNLKSLTQIYLFNNPWDCECSDI 120
Query: 215 SWLHRWLKRYPRL 227
+L W+ ++ +
Sbjct: 121 LYLKNWIVQHASI 133
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V C++K L VP +P TT++ Y+ ++++ K L + ++ + T
Sbjct: 1 ACPSQCSCSGTEVHCQKKSLASVPAGIP-TTTQVLYL-HVNQITK--LEPGVFDSLTQLT 56
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N +T LP F +L + L N + +P AF N K L ++
Sbjct: 57 --YLNLAVNQLTALPVGVFDKLTKLTHLSLHTNQLKSIPRGAFDNLKSLTQI 106
>gi|359279870|ref|NP_001240657.1| relaxin receptor 1 isoform 3 [Homo sapiens]
gi|62529843|gb|AAX85198.1| LGR7.10 [Homo sapiens]
gi|194390710|dbj|BAG62114.1| unnamed protein product [Homo sapiens]
Length = 724
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 65/111 (58%), Gaps = 1/111 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
S P C C +DC E L VP + T + L+ N I +LPP F NY L+++ L
Sbjct: 66 SVPVQCLCQGLELDCDETNLRAVPSV-SSNVTAMSLQWNLIRKLPPDCFKNYHDLQKLYL 124
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
N+I+ +++ AF+GL SLT L L++N +T+L GVF +L RL L I +N
Sbjct: 125 QNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDN 175
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 81/202 (40%), Gaps = 35/202 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N +T+L GVF +L RL L I +N HLS + +P
Sbjct: 148 LSHNRITFLKPGVFEDLHRLEWLIIEDN------HLSRI-----------------SPPT 184
Query: 65 IKGQN--ILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCRE-KGLNKVPIL 121
G N IL + + P +P C H R ++ L + +
Sbjct: 185 FYGLNSLILLVLMNNVLTRLP---------DKPLCQHMPRLHWLDLEGNHIHNLRNLTFI 235
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
T L + +N I L FA ++L +DL N+I + F+ LK L+ L L+
Sbjct: 236 SCSNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSY 295
Query: 182 NNLTYLPDGVFAELFRLRTLRI 203
N + + F L +L++L +
Sbjct: 296 NPIQKIQANQFDYLVKLKSLSL 317
>gi|397521583|ref|XP_003830873.1| PREDICTED: G-protein coupled receptor 124 [Pan paniscus]
Length = 1486
Score = 82.4 bits (202), Expect = 4e-13, Method: Composition-based stats.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 1/131 (0%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L L N I+ + P AF L+R+DLS N+I + + FQGL L L ++ N + L
Sbjct: 260 KLDLRNNIISTVQPGAFLGLGELKRLDLSNNRIGCLTSETFQGLPRLLRLNISGNIFSSL 319
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTKCFAPSHIKGQNILD 246
GVF EL L+ + + CDCHL WL W + R +L +T C PS + Q +
Sbjct: 320 QPGVFDELPALKVVDLGTEFLTCDCHLRWLLPWAQNRSLQLSEHTLCAYPSALHAQALGS 379
Query: 247 IPEHEFKCSGS 257
+ E + C G+
Sbjct: 380 LQEAQLCCEGA 390
Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 1 MPRTL----NNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGL 55
+PR L + N + L GVF EL L+ + + CDCHL WL W + R +L
Sbjct: 303 LPRLLRLNISGNIFSSLQPGVFDELPALKVVDLGTEFLTCDCHLRWLLPWAQNRSLQLSE 362
Query: 56 YTKCFAPSHIKGQNILDIPEHEFKCSGPVE 85
+T C PS + Q + + E + C G +E
Sbjct: 363 HTLCAYPSALHAQALGSLQEAQLCCEGALE 392
>gi|410038881|ref|XP_003950504.1| PREDICTED: relaxin receptor 1 [Pan troglodytes]
Length = 702
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 65/111 (58%), Gaps = 1/111 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
S P C C +DC E L VP + T + L+ N I +LPP F NY L+++ L
Sbjct: 45 SVPVQCLCQGLELDCDETNLRAVPSV-SSNVTAMSLQWNLIRKLPPDCFKNYHDLQKLYL 103
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
N+I+ +++ AF+GL SLT L L++N +T+L GVF +L RL L I +N
Sbjct: 104 QNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDN 154
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 80/200 (40%), Gaps = 35/200 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N +T+L GVF +L RL L I +N HLS + +P
Sbjct: 127 LSHNRITFLKPGVFEDLHRLEWLIIEDN------HLSRI-----------------SPPT 163
Query: 65 IKGQN--ILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCRE-KGLNKVPIL 121
G N IL + + P +P C H R ++ L + +
Sbjct: 164 FYGLNSLILLVLMNNVLTRLP---------DKPLCQHMPRLHWLDLEGNHIHNLRNLTFI 214
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
T L + +N I L FA ++L +DL N+I + F+ LK L+ L L+
Sbjct: 215 SCSNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSY 274
Query: 182 NNLTYLPDGVFAELFRLRTL 201
N + + F L +L++L
Sbjct: 275 NPIQKIQANQFDYLVKLKSL 294
>gi|397472316|ref|XP_003807696.1| PREDICTED: carboxypeptidase N subunit 2 [Pan paniscus]
Length = 545
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 113/258 (43%), Gaps = 20/258 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFI-----CDCHLSWLHR-WLKRYPRLGLYTK 58
L+NN L+ LP GVF +L L+ L + N+ L L R WL+R L
Sbjct: 200 LSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLS 259
Query: 59 CFAPSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKV 118
FA + L + + + P G A P + + E +
Sbjct: 260 IFA--SLGNLTFLSLQWNMLRV-----LPAGLFAHTPCLVGLSLTHNQLETVAEGAFAHL 312
Query: 119 PILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLT 178
L L L N IT LP F + + L ++ L N ++ + FQ L L L+
Sbjct: 313 SKL-----HSLMLSYNAITHLPAGIFRDLEELVKLYLGSNNLTALHPALFQNLSKLELLS 367
Query: 179 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPR--LGLYTKCFAP 236
L+ N LT LP+G+F + L L + N + CDCHL++L WL++Y L + T C P
Sbjct: 368 LSKNQLTTLPEGIFDTNYNLFNLALHGNPWQCDCHLAYLFNWLQQYTDRLLNIQTYCAGP 427
Query: 237 SHIKGQNILDIPEHEFKC 254
+++KGQ + + E + C
Sbjct: 428 AYLKGQVVPALNEKQLVC 445
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 95/232 (40%), Gaps = 47/232 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAP- 62
TLN N L LP+G+F L L +L + N L+ PR + F P
Sbjct: 127 TLNFNMLEALPEGLFQHLAALESLHLQGNQ-------------LQALPR-----RLFQPL 168
Query: 63 SHIK----GQNIL-DIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 117
+H+K QN+L +PE F ++ A P G +
Sbjct: 169 THLKTLNLAQNLLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKLGSLQ-------- 220
Query: 118 VPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSL 177
EL L+ N+I+ELPP+ F+ L R+ L +N I+ + + F L +LT L
Sbjct: 221 ----------ELFLDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLSIFASLGNLTFL 270
Query: 178 TLNNNNLTYLPDGVFAELFRLRTLRISENSF-----ICDCHLSWLHRWLKRY 224
+L N L LP G+FA L L ++ N HLS LH + Y
Sbjct: 271 SLQWNMLRVLPAGLFAHTPCLVGLSLTHNQLETVAEGAFAHLSKLHSLMLSY 322
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 115/310 (37%), Gaps = 45/310 (14%)
Query: 93 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRR 152
A+P CP C C V C ++ L VP +P + + T L +AF + L +
Sbjct: 19 AQP-CPVGCDCFFQEVFCSDEELATVPPDIPPYAKNIIFVETSFTTLETRAFGSNPNLTK 77
Query: 153 IDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC 212
+ Q+ + DAF GL L L + ++ L +F+ L L L ++ N
Sbjct: 78 VVFLNTQLCQFRPDAFGGLPRLEDLEVTGSSFLNLSTNIFSNLTSLGKLTLNFNM----- 132
Query: 213 HLSWLHRWLKRYPRLGLYTKCFA--PSHIKGQNILDIPEHEFK--CSGSSMETRSKIYRE 268
L+ P GL+ A H++G + +P F+ ++ + +
Sbjct: 133 --------LEALPE-GLFQHLAALESLHLQGNQLQALPRRLFQPLTHLKTLNLAQNLLAQ 183
Query: 269 ECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELT 328
FHP S K + A P G + N + L P+ ++L
Sbjct: 184 LPEELFHPLTSLQTLKLSNN--ALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQL- 240
Query: 329 YMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDI 388
++R+ W L++N IT LP FA+ L + L+ N +
Sbjct: 241 --FCLERL---------------W------LQRNAITHLPLSIFASLGNLTFLSLQWNML 277
Query: 389 TELPPKAFAN 398
LP FA+
Sbjct: 278 RVLPAGLFAH 287
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 359 LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
L+ N+I+ELPP+ F+ L R+ L++N IT LP FA+ L
Sbjct: 224 LDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLSIFASLGNL 267
>gi|70955583|gb|AAZ16353.1| variable lymphocyte receptor B [Eptatretus burgeri]
Length = 274
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 25/152 (16%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQ---------------------- 133
+CP C C+ V+C KGL VP + +TT L L+
Sbjct: 23 ACPSRCSCSGTEVNCNSKGLTSVPTGISASTTYLNLDNNKLQSLPNGVFDERTSLTLLSL 82
Query: 134 --NDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGV 191
N + LP F +L R++L NQ+ + ++ F L LT L L +N L +PDG+
Sbjct: 83 RTNQLQSLPSGVFDKLTQLTRLELYSNQLKSLPMEIFDKLTKLTQLVLYSNQLKSVPDGI 142
Query: 192 FAELFRLRTLRISENSFICDCH-LSWLHRWLK 222
F L L++L + N + C CH + +L RWL+
Sbjct: 143 FDRLTSLQSLYLENNPWDCSCHGIDYLSRWLQ 174
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C KGL VP + +TT L +D L S + F T
Sbjct: 23 ACPSRCSCSGTEVNCNSKGLTSVPTGISASTTYL-------NLDNNKLQSLPNGVFDERT 75
Query: 354 NRS-RRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L N + LP F +L R+ L N + LP + F +L ++
Sbjct: 76 SLTLLSLRTNQLQSLPSGVFDKLTQLTRLELYSNQLKSLPMEIFDKLTKLTQL 128
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-LSWLHRWLK 48
L +N L +PDG+F L L++L + N + C CH + +L RWL+
Sbjct: 129 VLYSNQLKSVPDGIFDRLTSLQSLYLENNPWDCSCHGIDYLSRWLQ 174
>gi|119926424|dbj|BAF43239.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 165
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 1/128 (0%)
Query: 101 CRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQI 160
C C+ VDC+ + L VP + T L L N IT+L P F + L+ + L NQ+
Sbjct: 3 CSCSGKTVDCQSRSLASVPAGILTTTQRLDLNDNQITKLEPGVFDHLANLQHLYLGDNQL 62
Query: 161 SKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HLSWLHR 219
S + V F L LT L LN N L +P+GVFA L L + + N + C C + +L
Sbjct: 63 SALPVGVFDKLTQLTDLGLNGNQLKSVPNGVFARLLSLTHVWLHTNPWDCQCTDILYLSG 122
Query: 220 WLKRYPRL 227
W ++ +
Sbjct: 123 WAAQHSGI 130
>gi|395542981|ref|XP_003773401.1| PREDICTED: probable G-protein coupled receptor 125 [Sarcophilus
harrisii]
Length = 1237
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 64/126 (50%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N I+ + P AF L+++DL+ N+I + D F+GL +L L L+ N + L
Sbjct: 26 LDLRNNLISTIDPGAFWGLSSLKKLDLTNNRIGCLNADIFRGLTNLVRLNLSGNLFSSLA 85
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
G F L LR+L +CDC++ W+HRW+K T+C P ++ Q + +
Sbjct: 86 QGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKERNITVRETRCAYPKSLQAQPVTGVK 145
Query: 249 EHEFKC 254
+ C
Sbjct: 146 QELLTC 151
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N + L G F L LR+L +CDC++ W+HRW+K T+C P
Sbjct: 76 LSGNLFSSLAQGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKERNITVRETRCAYPKS 135
Query: 65 IKGQNILDIPEHEFKCSGPVEKPT 88
++ Q + + + C P+E P+
Sbjct: 136 LQAQPVTGVKQELLTCDPPLELPS 159
>gi|50086741|gb|AAT70251.1| variable lymphocyte receptor [Petromyzon marinus]
Length = 192
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 59/113 (52%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C++K L VP +P T L L N IT+L P F + L+R+ L
Sbjct: 9 ACPSQCSCSGTEVHCQKKSLASVPAGIPTTTQVLYLHVNQITKLEPGVFDSLVNLQRLHL 68
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+NQ+ + F L LT L L+NN LT LP GV + L L L + +N
Sbjct: 69 DQNQLVSLPAGVFDRLTQLTRLDLDNNQLTVLPAGVISRLVNLHWLALHDNQL 121
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C+ V C++K L VP +P T L V+ I +++ + S + N +R
Sbjct: 9 ACPSQCSCSGTEVHCQKKSLASVPAGIPTTTQVLYLHVNQITKLEPGVFDSLV--NLQR- 65
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L+QN + LP F +L R+ L+ N +T LP + L +
Sbjct: 66 ----LHLDQNQLVSLPAGVFDRLTQLTRLDLDNNQLTVLPAGVISRLVNLHWL 114
>gi|119928619|dbj|BAF43132.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 172
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 10/169 (5%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C EK L VP +P T +L N IT+L P F + L +DL
Sbjct: 11 ACPARCSCSGTTVNCAEKRLVSVPAGIPTTTRDLYFYTNQITKLEPGVFDSLTLLTYLDL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
S NQ++ + F L L+ L L+ N L +P G F L L + + N + C C +
Sbjct: 71 SNNQLTALPEGVFDKLTQLSILNLHTNQLKSIPRGAFDNLKSLTHIFLYNNPWDCACSDI 130
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L RW+ ++P + N + +CSG++ R+
Sbjct: 131 LYLSRWISQHPGV---------PRTADDNWTRVVPDSARCSGTNTPVRA 170
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 18/118 (15%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELT-YMVSIDRV-----DKVLLYSYISN 347
+CP C C+ V+C EK L VP +P T +L Y I ++ D + L +Y+
Sbjct: 11 ACPARCSCSGTTVNCAEKRLVSVPAGIPTTTRDLYFYTNQITKLEPGVFDSLTLLTYLD- 69
Query: 348 NFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N +T LP F +L + L N + +P AF N K L +
Sbjct: 70 -----------LSNNQLTALPEGVFDKLTQLSILNLHTNQLKSIPRGAFDNLKSLTHI 116
>gi|50086811|gb|AAT70286.1| variable lymphocyte receptor [Petromyzon marinus]
Length = 167
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C E+ L VP +P T L L N IT+L P F + L ++L
Sbjct: 9 ACPSQCSCSGTQVNCHERRLASVPAGIPTTTQVLYLYTNKITKLEPGVFDSLTALTYLNL 68
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ++ + V F L LT L L+ N L +P G F L L + + N + C C +
Sbjct: 69 GGNQLTALPVGVFDKLTKLTHLALHINQLKSVPRGAFDNLKSLTHIWLYNNPWDCACSDI 128
Query: 215 SWLHRWLKRYPRL 227
+L RW+ ++P +
Sbjct: 129 LYLSRWISQHPGV 141
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C E+ L VP +P TT++ Y+ + +++ K+ + S +
Sbjct: 9 ACPSQCSCSGTQVNCHERRLASVPAGIP-TTTQVLYLYT-NKITKLEPGVFDSLTALTYL 66
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N L N +T LP F +L + L N + +P AF N K L +
Sbjct: 67 N----LGGNQLTALPVGVFDKLTKLTHLALHINQLKSVPRGAFDNLKSLTHI 114
>gi|81175422|gb|ABB59049.1| variable lymphocyte receptor B [Eptatretus stoutii]
Length = 251
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 1/129 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ + C + L VP +P + T L L+ N + LP F L ++ L
Sbjct: 23 ACPSRCSCSGTQIRCNSRSLTSVPSGIPSSATRLDLQGNKLQSLPYGVFDKLTSLTQLYL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
N++ + F L SLT L+L +N L +PDGVF L L+ + + N + C C +
Sbjct: 83 GANKLQSLPSGVFDKLTSLTHLSLQSNQLKSVPDGVFDSLTSLQKIWLHTNPWDCSCPRI 142
Query: 215 SWLHRWLKR 223
+L RWL +
Sbjct: 143 DYLSRWLNK 151
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ + C + L VP +P + T L + L S F + T
Sbjct: 23 ACPSRCSCSGTQIRCNSRSLTSVPSGIPSSATRLD-------LQGNKLQSLPYGVFDKLT 75
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ ++ L N + LP F L + L+ N + +P F + L+++
Sbjct: 76 SLTQLYLGANKLQSLPSGVFDKLTSLTHLSLQSNQLKSVPDGVFDSLTSLQKI 128
>gi|300797445|ref|NP_001179789.1| leucine-rich repeats and immunoglobulin-like domains protein 2 [Bos
taurus]
gi|296489396|tpg|DAA31509.1| TPA: leucine-rich repeats and immunoglobulin-like domains 2-like
[Bos taurus]
Length = 1065
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 71/130 (54%), Gaps = 5/130 (3%)
Query: 129 LRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLT 185
L L N+I+ E +AFA L ++ L NQI V AF GL+SL L LNNN +
Sbjct: 364 LNLRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSVTKKAFIGLESLEHLDLNNNAIM 423
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAPSHIKGQNI 244
+ + F++ RL+ L ++ NS +CDCHL WL +WL + + C P + GQ+I
Sbjct: 424 SIQENAFSQT-RLKELILNTNSLLCDCHLKWLLQWLVDNNFQHSVNVSCAHPEWLAGQSI 482
Query: 245 LDIPEHEFKC 254
L++ +F C
Sbjct: 483 LNVDLKDFVC 492
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L + QN + + P A+ +RL +DLS NQ++++ AF GL L L L +N +T++
Sbjct: 291 QLYVSQNAVERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHI 350
Query: 188 PDGVFAELFRLRTLRISEN 206
DGVF L L+TL + N
Sbjct: 351 ADGVFRFLSNLQTLNLRNN 369
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAPS 63
LNNN + + + F++ RL+ L ++ NS +CDCHL WL +WL + + C P
Sbjct: 417 LNNNAIMSIQENAFSQT-RLKELILNTNSLLCDCHLKWLLQWLVDNNFQHSVNVSCAHPE 475
Query: 64 HIKGQNILDIPEHEFKC 80
+ GQ+IL++ +F C
Sbjct: 476 WLAGQSILNVDLKDFVC 492
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
++L +N I+ +PPK F L+ ++L +N+I V FQGL SL SL + N ++ L
Sbjct: 197 VKLNRNRISMIPPKIF-KLPHLQFLELKRNRIKVVEGLTFQGLDSLRSLKMQRNGISKLK 255
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLH 218
DG F L + L + N+ + + + WL+
Sbjct: 256 DGAFFGLDNMEELELEHNN-LTEVNKGWLY 284
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L++N I + F LR + + +N ISK+ AF GL ++ L L +NNLT +
Sbjct: 220 LELKRNRIKVVEGLTFQGLDSLRSLKMQRNGISKLKDGAFFGLDNMEELELEHNNLTEVN 279
Query: 189 DGVFAELFRLRTLRISENS 207
G L L+ L +S+N+
Sbjct: 280 KGWLYGLRMLQQLYVSQNA 298
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 127 TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTY 186
T L L N I E+ + F Y L +DLS NQIS++ +F ++ L L L+NN +T
Sbjct: 123 TLLSLVHNIIPEINAEVFQFYPALETLDLSSNQISEIKTSSFPRMQ-LKYLNLSNNRITV 181
Query: 187 LPDGVFAEL 195
L G F L
Sbjct: 182 LEAGCFDNL 190
>gi|297293599|ref|XP_001096344.2| PREDICTED: relaxin receptor 1 isoform 1 [Macaca mulatta]
Length = 746
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 65/111 (58%), Gaps = 1/111 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
S P C C +DC E L VP + T + L+ N I +LPP F NY L+++ L
Sbjct: 88 SVPVQCLCQGLELDCDETNLRAVPSV-SSNVTAMSLQWNLIRKLPPDCFKNYHDLQKLYL 146
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
N+I+ +++ AF+GL SLT L L++N +T+L GVF +L RL L I +N
Sbjct: 147 QNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDN 197
Score = 37.7 bits (86), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 81/202 (40%), Gaps = 35/202 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N +T+L GVF +L RL L I +N HLS + +P
Sbjct: 170 LSHNRITFLKPGVFEDLHRLEWLIIEDN------HLSRI-----------------SPPT 206
Query: 65 IKGQN--ILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCRE-KGLNKVPIL 121
G N IL + + P +P C H R ++ L + +
Sbjct: 207 FYGLNSLILLVLMNNVLTRLP---------DKPLCQHMPRLHWLDLEGNHIHNLRNLTFI 257
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
T L + +N I L FA ++L +DL N+I + F+ LK L+ L L+
Sbjct: 258 SCSNLTVLVMRKNKINYLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSY 317
Query: 182 NNLTYLPDGVFAELFRLRTLRI 203
N + + F L +L++L +
Sbjct: 318 NPIQKIQANQFDYLVKLKSLSL 339
>gi|81175372|gb|ABB59025.1| variable lymphocyte receptor B [Eptatretus burgeri]
Length = 261
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 78/171 (45%), Gaps = 9/171 (5%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C ++ L VP +P +TT L L N LP F L ++ L
Sbjct: 23 ACPSRCSCSGTTVNCNQESLTSVPTGIPGSTTYLDLGDNKFQSLPDGVFDKLTSLTKLYL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
N+ + F L LT L L+ N L +PDGVF L L+ + + N + C C +
Sbjct: 83 CCNKFQSLPHGVFDKLTKLTILGLDKNQLKSVPDGVFDRLTSLQGIWLYNNPWDCTCPGI 142
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKI 265
+L W+K+ + + S + IP+ KCSGS RS I
Sbjct: 143 RYLSEWIKKNSGIVYHYSSSTGSRV-------IPDSA-KCSGSGKPVRSII 185
>gi|410038879|ref|XP_003950503.1| PREDICTED: relaxin receptor 1 [Pan troglodytes]
Length = 746
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 65/111 (58%), Gaps = 1/111 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
S P C C +DC E L VP + T + L+ N I +LPP F NY L+++ L
Sbjct: 88 SVPVQCLCQGLELDCDETNLRAVPSV-SSNVTAMSLQWNLIRKLPPDCFKNYHDLQKLYL 146
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
N+I+ +++ AF+GL SLT L L++N +T+L GVF +L RL L I +N
Sbjct: 147 QNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDN 197
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 81/202 (40%), Gaps = 35/202 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N +T+L GVF +L RL L I +N HLS + +P
Sbjct: 170 LSHNRITFLKPGVFEDLHRLEWLIIEDN------HLSRI-----------------SPPT 206
Query: 65 IKGQN--ILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCRE-KGLNKVPIL 121
G N IL + + P +P C H R ++ L + +
Sbjct: 207 FYGLNSLILLVLMNNVLTRLP---------DKPLCQHMPRLHWLDLEGNHIHNLRNLTFI 257
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
T L + +N I L FA ++L +DL N+I + F+ LK L+ L L+
Sbjct: 258 SCSNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSY 317
Query: 182 NNLTYLPDGVFAELFRLRTLRI 203
N + + F L +L++L +
Sbjct: 318 NPIQKIQANQFDYLVKLKSLSL 339
>gi|397503982|ref|XP_003822590.1| PREDICTED: relaxin receptor 1 isoform 3 [Pan paniscus]
Length = 746
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 65/111 (58%), Gaps = 1/111 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
S P C C +DC E L VP + T + L+ N I +LPP F NY L+++ L
Sbjct: 88 SVPVQCLCQGLELDCDETNLRAVPSV-SSNVTAMSLQWNLIRKLPPDCFKNYHDLQKLYL 146
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
N+I+ +++ AF+GL SLT L L++N +T+L GVF +L RL L I +N
Sbjct: 147 QNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDN 197
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 81/202 (40%), Gaps = 35/202 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N +T+L GVF +L RL L I +N HLS + +P
Sbjct: 170 LSHNRITFLKPGVFEDLHRLEWLIIEDN------HLSRI-----------------SPPT 206
Query: 65 IKGQN--ILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCRE-KGLNKVPIL 121
G N IL + + P +P C H R ++ L + +
Sbjct: 207 FYGLNSLILLVLMNNVLTRLP---------DKPLCQHMPRLHWLDLEGNHIHNLRNLTFI 257
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
T L + +N I L FA ++L +DL N+I + F+ LK L+ L L+
Sbjct: 258 SCSNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSY 317
Query: 182 NNLTYLPDGVFAELFRLRTLRI 203
N + + F L +L++L +
Sbjct: 318 NPIQKIQANQFDYLVKLKSLSL 339
>gi|284010894|dbj|BAI66922.1| variable lymphocyte receptor B [Eptatretus burgeri]
Length = 187
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 76/171 (44%), Gaps = 13/171 (7%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C + VP +P +TT+L LE N + LP F L +DL
Sbjct: 23 ACPSRCSCSGTEVSCSSQSRTSVPSGIPSSTTKLWLESNKLQSLPSGVFDKLTSLTFLDL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
N+ + F L LT L L+ N L +PDG+F L L+ + + N + C C +
Sbjct: 83 GANKFQSIPHGVFDKLTKLTILGLDKNQLKSVPDGIFDRLTSLQKIYLYSNPWDCTCPGI 142
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKI 265
+ +W+ ++ + + T ++ KCSGS RS I
Sbjct: 143 RYFSQWINKHSGVLIGTSG------------NVNPDSAKCSGSGKPVRSII 181
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V C + VP +P +TT+L ++ L S S F + T
Sbjct: 23 ACPSRCSCSGTEVSCSSQSRTSVPSGIPSSTTKL-------WLESNKLQSLPSGVFDKLT 75
Query: 354 NRS-RRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L N +P F +L + L++N + +P F L+++
Sbjct: 76 SLTFLDLGANKFQSIPHGVFDKLTKLTILGLDKNQLKSVPDGIFDRLTSLQKI 128
>gi|402870740|ref|XP_003899362.1| PREDICTED: relaxin receptor 1 isoform 3 [Papio anubis]
Length = 746
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 65/111 (58%), Gaps = 1/111 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
S P C C +DC E L VP + T + L+ N I +LPP F NY L+++ L
Sbjct: 88 SVPVQCLCQGLELDCDETNLRAVPSV-SSNVTAMSLQWNLIRKLPPDCFKNYHDLQKLYL 146
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
N+I+ +++ AF+GL SLT L L++N +T+L GVF +L RL L I +N
Sbjct: 147 QNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDN 197
Score = 37.7 bits (86), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 81/202 (40%), Gaps = 35/202 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N +T+L GVF +L RL L I +N HLS + +P
Sbjct: 170 LSHNRITFLKPGVFEDLHRLEWLIIEDN------HLSRI-----------------SPPT 206
Query: 65 IKGQN--ILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCRE-KGLNKVPIL 121
G N IL + + P +P C H R ++ L + +
Sbjct: 207 FYGLNSLILLVLMNNVLTRLP---------DKPLCQHMPRLHWLDLEGNHIHNLRNLTFI 257
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
T L + +N I L FA ++L +DL N+I + F+ LK L+ L L+
Sbjct: 258 SCSNLTVLVMRKNKINYLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSY 317
Query: 182 NNLTYLPDGVFAELFRLRTLRI 203
N + + F L +L++L +
Sbjct: 318 NPIQKIQANQFDYLVKLKSLSL 339
>gi|284010928|dbj|BAI66939.1| variable lymphocyte receptor B [Eptatretus burgeri]
Length = 187
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 13/171 (7%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+CR K L P +P +TT L L +N + +P F +L ++ L
Sbjct: 23 ACPSRCSCSGTTVNCRSKSLTSFPSGIPSSTTILYLHENKLQSVPNGVFDKLTQLTKLYL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
NQ+ + F L SLT L L N L +PDG+F L L+ + + N + C C +
Sbjct: 83 HYNQLQSLPNGMFDELTSLTHLYLYTNQLKSVPDGIFDRLTSLQYIYLYSNPWDCTCPGI 142
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKI 265
+ W+ ++ + L + ++ KCSGS RS I
Sbjct: 143 RYFSEWINKHSGVVL------------DSSNNVNPDSAKCSGSGKPVRSII 181
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+CR K L P +P +TT L + + L S + F + T
Sbjct: 23 ACPSRCSCSGTTVNCRSKSLTSFPSGIPSSTTIL-------YLHENKLQSVPNGVFDKLT 75
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ L N + LP F L + L N + +P F L+ +
Sbjct: 76 QLTKLYLHYNQLQSLPNGMFDELTSLTHLYLYTNQLKSVPDGIFDRLTSLQYI 128
>gi|119928625|dbj|BAF43135.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 170
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 64/133 (48%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C V C E+ L VP +P L L +N IT+L F + L+ + L
Sbjct: 11 ACPAQCSCPGTDVQCHERSLGSVPAGIPTTALRLYLYRNQITKLELGVFDHLANLQHLYL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
NQ+S + V F L LT L LN N L +PDG FA L L + + N + C C +
Sbjct: 71 GDNQLSALPVGVFDKLTQLTDLGLNGNQLKSVPDGAFARLSSLTHVWLHTNPWDCQCTDI 130
Query: 215 SWLHRWLKRYPRL 227
+L W ++ +
Sbjct: 131 LYLSGWAAQHSGI 143
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLL--YSYISNNFKR 351
+CP C C V C E+ L VP +P TT L + +++ K+ L + +++N
Sbjct: 11 ACPAQCSCPGTDVQCHERSLGSVPAGIP--TTALRLYLYRNQITKLELGVFDHLAN---- 64
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L N ++ LP F +L + L N + +P AFA L +
Sbjct: 65 --LQHLYLGDNQLSALPVGVFDKLTQLTDLGLNGNQLKSVPDGAFARLSSLTHV 116
>gi|432874776|ref|XP_004072587.1| PREDICTED: leucine-rich repeat LGI family member 3-like [Oryzias
latipes]
Length = 548
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 87/230 (37%), Gaps = 41/230 (17%)
Query: 83 PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRL----------- 131
P E + P CP C C C + +P P L +
Sbjct: 24 PRESFARRASKVPRCPATCSCTKDSAFCVDT--KTIPKSFPPGIISLTMVNAAFQTIPEG 81
Query: 132 -------------EQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLT 178
N T + AFA L+ + + N I ++ F+GLKSLT L+
Sbjct: 82 AFSHLHLLQFLLLNSNTFTTVADDAFAGLSHLQYLFIENNDIQSLSKHTFRGLKSLTHLS 141
Query: 179 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 238
L+NNNL +LP +F L L L + NSF CDC + WL W+++ C +P
Sbjct: 142 LSNNNLQHLPRDLFKHLEILTDLDLRGNSFRCDCKIKWLVDWMEKTNTSVPAIYCASPFE 201
Query: 239 IKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGE 288
+G+ I D+ +F C S DF Y + P + E
Sbjct: 202 FQGRRIHDLTPRDFNC---------------ISADFAVYETFPFHSVSVE 236
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L+NNNL +LP +F L L L + NSF CDC + WL W+++ C +P
Sbjct: 141 SLSNNNLQHLPRDLFKHLEILTDLDLRGNSFRCDCKIKWLVDWMEKTNTSVPAIYCASPF 200
Query: 64 HIKGQNILDIPEHEFKC 80
+G+ I D+ +F C
Sbjct: 201 EFQGRRIHDLTPRDFNC 217
>gi|432858934|ref|XP_004069011.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 1-like [Oryzias latipes]
Length = 1022
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 70/135 (51%), Gaps = 4/135 (2%)
Query: 124 EATTELRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN 180
+A L L+ NDI+ E AF+ RL ++ L N+I VA +AF GL+SL L L
Sbjct: 350 KAVRILELDHNDISGTIEDTNGAFSGLDRLNKLTLFGNKIKSVAKEAFSGLESLEHLNLG 409
Query: 181 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW-LKRYPRLGLYTKCFAPSHI 239
N + + F+++ L+ L + NSF+CDC L WL W L R + + C P +
Sbjct: 410 ENPIRSIQPDAFSKMRNLKNLIMDSNSFLCDCQLQWLPGWLLIRGLQSDVNATCAHPLSV 469
Query: 240 KGQNILDIPEHEFKC 254
KG ++ + P F C
Sbjct: 470 KGMSVFEAPPSSFMC 484
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
Query: 85 EKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAF 144
E+ + +E C C C VDC L P+ LP T L L N +T + P+AF
Sbjct: 24 ERNSSGLGSELPCAQNCTCDGDSVDCSRLELTATPLDLPARTVSLNLGHNKLTSINPEAF 83
Query: 145 ANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRIS 204
A+ LR + L N+++ + D + SL L++NN+ + EL + TL +S
Sbjct: 84 ASLPNLRELHLDHNELTSIP-DLGHFASRIVSLYLHHNNIRSIDGRRIRELVSVETLDLS 142
Query: 205 EN 206
N
Sbjct: 143 NN 144
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 93/213 (43%), Gaps = 25/213 (11%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L +N LT + FA L LR L + H L P LG + +
Sbjct: 70 LGHNKLTSINPEAFASLPNLRELHLD-------------HNELTSIPDLGHFASRIVSLY 116
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL--NKVPIL- 121
+ NI I + VE T + + C + R+ L NK+ +L
Sbjct: 117 LHHNNIRSIDGRRIRELVSVE--TLDLSNNEITELRGHCFPAGLQIRDLYLSNNKISVLE 174
Query: 122 ------LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLT 175
L + LRL +N I+++P +AF RL +++L++N+I ++ FQGL SL
Sbjct: 175 LGALDRLGSSLQVLRLSRNRISQIPIRAF-QLPRLTQLELNRNRIRQIEGLTFQGLSSLE 233
Query: 176 SLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
L L N+++ L DG F +L +++ L + N+
Sbjct: 234 VLKLQRNSISKLTDGAFWDLAKMKVLHLEYNNL 266
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L LE N++TE+ + L ++ LS N I+++ D + + L L L+ NNLT L
Sbjct: 259 LHLEYNNLTEVNSGSLYGLTSLTQLFLSNNSIARINPDGLKFCQRLRELNLSYNNLTRLD 318
Query: 189 DGVFAELFRLRTLRISENSF 208
+G A L L TLR+ NS
Sbjct: 319 EGSLAMLGDLHTLRLGHNSI 338
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW-LKRYPRLGLYTKCFAPS 63
L N + + F+++ L+ L + NSF+CDC L WL W L R + + C P
Sbjct: 408 LGENPIRSIQPDAFSKMRNLKNLIMDSNSFLCDCQLQWLPGWLLIRGLQSDVNATCAHPL 467
Query: 64 HIKGQNILDIPEHEFKC 80
+KG ++ + P F C
Sbjct: 468 SVKGMSVFEAPPSSFMC 484
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%)
Query: 127 TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTY 186
T+L L N I + P +RLR ++LS N ++++ + L L +L L +N+++
Sbjct: 281 TQLFLSNNSIARINPDGLKFCQRLRELNLSYNNLTRLDEGSLAMLGDLHTLRLGHNSISQ 340
Query: 187 LPDGVFAELFRLRTLRISENSF 208
+ +G F L +R L + N
Sbjct: 341 INEGAFRGLKAVRILELDHNDI 362
>gi|70955644|gb|AAZ16383.1| variable lymphocyte receptor B [Eptatretus stoutii]
Length = 258
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 79/171 (46%), Gaps = 14/171 (8%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ IV C + L VP +P +TTEL L N + LP F L + L
Sbjct: 23 ACPSRCSCSGTIVYCHSRSLTSVPSGIPSSTTELYLCCNKLQSLPHGVFDKLTSLTYLHL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
N++ + F L LT+L L NN L +PDGVF L L+ + + N + C C +
Sbjct: 83 CCNKLQSLPNGVFDKLTQLTNLQLYNNQLKSVPDGVFDSLTSLQKIYLFSNPWDCACPGI 142
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKI 265
+L W+ ++ + + +D P+ KCSGS RS I
Sbjct: 143 RYLSEWINKHSGV-----------VNAYGAVD-PDSA-KCSGSGKPVRSII 180
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ IV C + L VP +P +TTEL Y+ L S F + T
Sbjct: 23 ACPSRCSCSGTIVYCHSRSLTSVPSGIPSSTTEL-YLCCNK------LQSLPHGVFDKLT 75
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L N + LP F +L ++L N + +P F + L+++
Sbjct: 76 SLTYLHLCCNKLQSLPNGVFDKLTQLTNLQLYNNQLKSVPDGVFDSLTSLQKI 128
>gi|410912678|ref|XP_003969816.1| PREDICTED: immunoglobulin superfamily containing leucine-rich
repeat protein 2-like [Takifugu rubripes]
Length = 674
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 89/225 (39%), Gaps = 55/225 (24%)
Query: 91 CAAEPSCPHPCRCADG----IVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFAN 146
CAA CP C C+D + +C KG ++VP + P + + L N I+ + +F +
Sbjct: 17 CAAGLRCPELCTCSDKQDRYVAECSFKGFSEVPEVFPPTVSTIHLSANKISSIRSGSFDS 76
Query: 147 YKRLRRIDLSKNQISKVA------------------------------------------ 164
+L + L+ NQIS V
Sbjct: 77 VHQLMSLWLANNQISSVEEGSFATLVHLQSFDVSYNNIANFPWGDLRNLTNLQLLKMNHN 136
Query: 165 ------VDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLH 218
DAF LK L SL LNNN + G F L + L+I EN F C C L WL
Sbjct: 137 QMVHLPKDAFSTLKDLRSLRLNNNKFVTIAKGTFQGLLSMSYLQIHENPFACTCSLDWLR 196
Query: 219 RWLKRYP-RLG--LYTKCFAPSHIKGQNILDIPEHEFKCSGSSME 260
W+ +G C +P ++KG+ I +PE K +S++
Sbjct: 197 VWISTTTVSIGDQELIVCESPENLKGRVIGRLPETNCKGPNTSIQ 241
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLG--LYTKCFA 61
LNNN + G F L + L+I EN F C C L WL W+ +G C +
Sbjct: 157 LNNNKFVTIAKGTFQGLLSMSYLQIHENPFACTCSLDWLRVWISTTTVSIGDQELIVCES 216
Query: 62 PSHIKGQNILDIPEHEFKCSGP 83
P ++KG+ I +PE C GP
Sbjct: 217 PENLKGRVIGRLPET--NCKGP 236
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 26/141 (18%)
Query: 289 CAAEPSCPHPCRCADG----IVDCREKGLNKVPILLPEATTELTYMVSIDRVDKV----- 339
CAA CP C C+D + +C KG ++VP + P + T +S +++ +
Sbjct: 17 CAAGLRCPELCTCSDKQDRYVAECSFKGFSEVPEVFPPTVS--TIHLSANKISSIRSGSF 74
Query: 340 -----LLYSYISNN---------FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLE 384
L+ +++NN F + +S + N+I P N L+ +++
Sbjct: 75 DSVHQLMSLWLANNQISSVEEGSFATLVHLQSFDVSYNNIANFPWGDLRNLTNLQLLKMN 134
Query: 385 QNDITELPPKAFANYKRLRRM 405
N + LP AF+ K LR +
Sbjct: 135 HNQMVHLPKDAFSTLKDLRSL 155
>gi|148228589|ref|NP_001089881.1| leucine-rich repeat containing G protein-coupled receptor 4
precursor [Xenopus laevis]
gi|80476487|gb|AAI08601.1| MGC131124 protein [Xenopus laevis]
Length = 955
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 67/131 (51%), Gaps = 5/131 (3%)
Query: 80 CSGPVEKPTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELRLEQNDITE 138
CSG P+G + P CP PC C DG VDC +GL VP L T L L N+IT+
Sbjct: 18 CSG---GPSGVSSPAP-CPTPCACDLDGGVDCSGRGLVAVPEGLSLFTHSLDLSMNNITK 73
Query: 139 LPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRL 198
LP AF + L + L+ N +S + A GLK L LTL NN L +P L L
Sbjct: 74 LPEGAFKGFPYLEELRLAGNDLSFIHPMALSGLKELKVLTLQNNQLKNVPSESLKGLVLL 133
Query: 199 RTLRISENSFI 209
++LR+ N +
Sbjct: 134 QSLRLDANHIV 144
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 107/257 (41%), Gaps = 54/257 (21%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLH-RWLKRYPRLGLYTKCFAPS 63
L+ NN+T LP+G F L LR++ N LS++H L L + T
Sbjct: 66 LSMNNITKLPEGAFKGFPYLEELRLAGND------LSFIHPMALSGLKELKVLT------ 113
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCR-----EKGLNKV 118
++ + ++P K G V + A P +G+V R + L +V
Sbjct: 114 -LQNNQLKNVPSESLK--GLVLLQSLRLDANHIVTVPEDSFEGLVQLRHLWLDDNSLTEV 170
Query: 119 PIL----LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSL 174
PI LP + L L N I +P AF+N L + L N+I + F GL +L
Sbjct: 171 PIRPLSNLP-SLQALTLALNKIAHIPDYAFSNLSSLVVLHLHNNKIRTLGPHCFHGLDNL 229
Query: 175 TSLTLNNNNL-----------------------TYLPDGVFAELFRLRTLRISEN--SFI 209
+L LN NNL T +PDG F + LRT+++ +N SF+
Sbjct: 230 EALDLNYNNLIDFPNAIKSLPNLKELGFHSNSITTIPDGAFVKNPLLRTIQLYDNPLSFV 289
Query: 210 CDC---HLSWLHRWLKR 223
+ +LS LH + R
Sbjct: 290 GNSAFQNLSDLHFLIIR 306
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 32/127 (25%)
Query: 280 CPVEKPTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDK 338
C P+G + P CP PC C DG VDC +GL + +PE + T+
Sbjct: 17 CCSGGPSGVSSPAP-CPTPCACDLDGGVDCSGRGL----VAVPEGLSLFTH--------- 62
Query: 339 VLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFAN 398
S L N+IT+LP AF + L +RL ND++ + P A +
Sbjct: 63 -----------------SLDLSMNNITKLPEGAFKGFPYLEELRLAGNDLSFIHPMALSG 105
Query: 399 YKRLRRM 405
K L+ +
Sbjct: 106 LKELKVL 112
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 87/199 (43%), Gaps = 39/199 (19%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISEN--SFICDC---HLSWLHRWLKR-------YPR 52
++N++T +PDG F + LRT+++ +N SF+ + +LS LH + R +P
Sbjct: 257 FHSNSITTIPDGAFVKNPLLRTIQLYDNPLSFVGNSAFQNLSDLHFLIIRGASNVQWFPN 316
Query: 53 LGLYTKCFAPSHIKGQNILDIPE---HEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVD 109
L T + G I IP E K ++ E A G
Sbjct: 317 LT-GTNNLESLTLTGTKIKSIPIKFCQEQKMLRTLDLSYNEITAPV----------GFEG 365
Query: 110 CREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ 169
C A E+ L+ N I E+ + F LR +DLS+N+I + +AF
Sbjct: 366 C-------------SALEEVYLQNNQIQEVQNETFQGLTALRVLDLSRNRIRTIYKEAFV 412
Query: 170 GLKSLTSLTLNNNNLTYLP 188
LK+LT+L L+ N+L+ P
Sbjct: 413 TLKALTNLDLSFNDLSTFP 431
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
L L I +P K K LR +DLS N+I+ A F+G +L + L NN + +
Sbjct: 325 SLTLTGTKIKSIPIKFCQEQKMLRTLDLSYNEIT--APVGFEGCSALEEVYLQNNQIQEV 382
Query: 188 PDGVFAELFRLRTLRISEN 206
+ F L LR L +S N
Sbjct: 383 QNETFQGLTALRVLDLSRN 401
>gi|119928663|dbj|BAF43153.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 171
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 65/133 (48%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C K L VP +P L L N IT+L P F L+ + L
Sbjct: 11 ACPARCSCSGTDVHCNSKSLASVPAGIPTNAKSLNLNYNQITKLEPGVFDRLGNLQELYL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ+S + V F L LT L+LN N L +P G F L L + + N + C C +
Sbjct: 71 GWNQLSALPVGVFDKLTQLTHLSLNVNQLKSIPRGAFDNLKSLTHIFLYNNPWDCACSDI 130
Query: 215 SWLHRWLKRYPRL 227
+L RW+ ++P +
Sbjct: 131 LYLSRWISQHPGV 143
Score = 41.2 bits (95), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 47/113 (41%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V C K L VP +P L ++ +++ K+ F R
Sbjct: 11 ACPARCSCSGTDVHCNSKSLASVPAGIPTNAKSLN--LNYNQITKLE-----PGVFDRLG 63
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N + L N ++ LP F +L + L N + +P AF N K L +
Sbjct: 64 NLQELYLGWNQLSALPVGVFDKLTQLTHLSLNVNQLKSIPRGAFDNLKSLTHI 116
>gi|114591170|ref|XP_001162714.1| PREDICTED: carboxypeptidase N subunit 2 [Pan troglodytes]
Length = 545
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 113/258 (43%), Gaps = 20/258 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFI-----CDCHLSWLHR-WLKRYPRLGLYTK 58
L+NN L+ LP GVF +L L+ L + N+ L L R WL+R L
Sbjct: 200 LSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLS 259
Query: 59 CFAPSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKV 118
FA + L + + + P G A P + + E +
Sbjct: 260 IFA--SLGNLTFLSLQWNMLRV-----LPAGLFAHTPCLVGLSLTHNQLETVAEGAFAHL 312
Query: 119 PILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLT 178
L L L N IT LP F + + L ++ L N ++ + FQ L L L+
Sbjct: 313 SNL-----HSLMLSYNAITHLPAGIFRDLEELVKLYLGSNNLTALHPALFQNLSKLELLS 367
Query: 179 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPR--LGLYTKCFAP 236
L+ N LT LP+G+F + L L + N + CDCHL++L WL++Y L + T C P
Sbjct: 368 LSKNQLTTLPEGIFDTNYNLFNLALHGNPWQCDCHLAYLFNWLQQYTDRLLNIQTYCAGP 427
Query: 237 SHIKGQNILDIPEHEFKC 254
+++KGQ + + E + C
Sbjct: 428 AYLKGQVVPALNEKQLVC 445
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 95/232 (40%), Gaps = 47/232 (20%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAP- 62
TLN N L LP+G+F L L +L + N L+ PR + F P
Sbjct: 127 TLNFNMLEALPEGLFQHLAALESLHLQGNQ-------------LQALPR-----RLFQPL 168
Query: 63 SHIK----GQNIL-DIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 117
+H+K QN+L +PE F ++ A P G +
Sbjct: 169 THLKTLNLAQNLLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKLGSLQ-------- 220
Query: 118 VPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSL 177
EL L+ N+I+ELPP+ F+ L R+ L +N I+ + + F L +LT L
Sbjct: 221 ----------ELFLDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLSIFASLGNLTFL 270
Query: 178 TLNNNNLTYLPDGVFAELFRLRTLRISENSF-----ICDCHLSWLHRWLKRY 224
+L N L LP G+FA L L ++ N HLS LH + Y
Sbjct: 271 SLQWNMLRVLPAGLFAHTPCLVGLSLTHNQLETVAEGAFAHLSNLHSLMLSY 322
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 116/310 (37%), Gaps = 45/310 (14%)
Query: 93 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRR 152
A+P CP C C V C ++ L VP+ +P + + T L +AF + L +
Sbjct: 19 AQP-CPVGCDCFVQEVFCSDEELATVPLDIPPYAKNIIFVETSFTTLETRAFGSNPNLTK 77
Query: 153 IDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC 212
+ Q+ + DAF GL L L + ++ L +F+ L L L ++ N
Sbjct: 78 VVFLNTQLCQFRPDAFGGLPRLEDLEVTGSSFLNLSTNIFSNLTSLGKLTLNFNM----- 132
Query: 213 HLSWLHRWLKRYPRLGLYTKCFA--PSHIKGQNILDIPEHEFK--CSGSSMETRSKIYRE 268
L+ P GL+ A H++G + +P F+ ++ + +
Sbjct: 133 --------LEALPE-GLFQHLAALESLHLQGNQLQALPRRLFQPLTHLKTLNLAQNLLAQ 183
Query: 269 ECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELT 328
FHP S K + A P G + N + L P+ ++L
Sbjct: 184 LPEELFHPLTSLQTLKLSNN--ALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQL- 240
Query: 329 YMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDI 388
++R+ W L++N IT LP FA+ L + L+ N +
Sbjct: 241 --FCLERL---------------W------LQRNAITHLPLSIFASLGNLTFLSLQWNML 277
Query: 389 TELPPKAFAN 398
LP FA+
Sbjct: 278 RVLPAGLFAH 287
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 359 LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
L+ N+I+ELPP+ F+ L R+ L++N IT LP FA+ L
Sbjct: 224 LDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLSIFASLGNL 267
>gi|335299290|ref|XP_003132355.2| PREDICTED: leucine-rich repeats and immunoglobulin-like domains 1
[Sus scrofa]
Length = 1107
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Query: 129 LRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLT 185
L L+ N+I+ E AF L ++ L N+I VA AF GL+ L L L N +
Sbjct: 363 LELDHNEISGTIEDTSGAFTGLDSLSKLTLFGNKIKSVAKRAFSGLEGLEHLNLGENAIR 422
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTK-CFAPSHIKGQNI 244
+ F ++ L+ L IS +SF+CDC L WL WL G T C P +KGQ+I
Sbjct: 423 SVQFDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLLGRMLQGFVTATCAHPESLKGQSI 482
Query: 245 LDIPEHEFKC 254
+P F C
Sbjct: 483 FSVPPESFVC 492
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 133 QNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
+N IT+LP KAF RL ++DL++N+I + FQGL SL L L NN++ L DG F
Sbjct: 200 KNRITQLPVKAF-KLPRLTQLDLNRNRIRLIEGLTFQGLDSLEVLKLQRNNISKLTDGAF 258
Query: 193 AELFRLRTLRISENSF 208
L R+ L + NS
Sbjct: 259 WGLARMHVLHLEFNSL 274
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTK-CFAPS 63
L N + + F ++ L+ L IS +SF+CDC L WL WL G T C P
Sbjct: 416 LGENAIRSVQFDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLLGRMLQGFVTATCAHPE 475
Query: 64 HIKGQNILDIPEHEFKC 80
+KGQ+I +P F C
Sbjct: 476 SLKGQSIFSVPPESFVC 492
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Query: 106 GIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAV 165
+DC +GL +P LP T L L N ++E+ P F + L+ + LS N+++ A+
Sbjct: 53 DSLDCGGRGLAALPGDLPAWTRSLNLSYNKLSEIDPAGFEDLPNLQEVYLSNNELA--AI 110
Query: 166 DAFQGLKS-LTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ S + SL L +N + + L L +S N+
Sbjct: 111 PSLGPASSHIVSLFLQHNRIRSVEGSQLKAYLSLEVLDLSSNNI 154
>gi|432091270|gb|ELK24474.1| Leucine-rich repeat-containing protein 4 [Myotis davidii]
Length = 652
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 2/131 (1%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL + N + P +F L+++ + +Q+S + +AF GL SL L L +NNL+ L
Sbjct: 221 ELEMSGNHFPAIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSL 280
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAPSHIKGQNIL 245
P +F L L L + N + CDC + WL WL+ Y +C AP H++G+ ++
Sbjct: 281 PHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAPLHMRGRYLV 340
Query: 246 DIPEHEFKCSG 256
++ + F+CS
Sbjct: 341 EVDQASFQCSA 351
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 96 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRI 153
+CP C C++ V C +GL++VP +P T L L +N+I + F + L +
Sbjct: 44 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVL 103
Query: 154 DLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
L +N I ++ V AF GL SL +L L +N LT +P G F L +LR L + N
Sbjct: 104 QLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNN 156
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAP 62
L +NNL+ LP +F L L L + N + CDC + WL WL+ Y +C AP
Sbjct: 272 LAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAP 331
Query: 63 SHIKGQNILDIPEHEFKCSGP--VEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
H++G+ ++++ + F+CS P ++ P +E R A+ + CR ++ V
Sbjct: 332 LHMRGRYLVEVDQASFQCSAPFIMDAPRDLNISE------GRMAE--LKCRTPPMSSVKW 383
Query: 121 LLPEATT 127
LLP T
Sbjct: 384 LLPNGTV 390
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 294 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
+CP C C++ V C +GL++VP +P T L M + ++ + + ++ +
Sbjct: 44 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHH---- 99
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+L +N I ++ AF L + L N +T +P AF +LR +
Sbjct: 100 --LEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLREL 151
>gi|426359364|ref|XP_004046946.1| PREDICTED: G-protein coupled receptor 124 [Gorilla gorilla gorilla]
Length = 1183
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 67/131 (51%), Gaps = 1/131 (0%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L L N I+ + P AF L+R+DLS N+I + + FQGL L L ++ N + L
Sbjct: 115 KLDLRNNIISTVQPGAFLGLGELKRLDLSNNRIGCLTSETFQGLPRLLRLNISGNIFSSL 174
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTKCFAPSHIKGQNILD 246
GVF EL L+ + + CDCHL WL W + R +L T C PS + Q +
Sbjct: 175 QPGVFDELPALKVVDLGTEFLTCDCHLRWLLPWAQNRSLQLSERTLCAYPSALHAQALGS 234
Query: 247 IPEHEFKCSGS 257
+ E + C G+
Sbjct: 235 LQEAQLCCEGA 245
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTKCFAPS 63
++ N + L GVF EL L+ + + CDCHL WL W + R +L T C PS
Sbjct: 166 ISGNIFSSLQPGVFDELPALKVVDLGTEFLTCDCHLRWLLPWAQNRSLQLSERTLCAYPS 225
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ Q + + E + C G +E
Sbjct: 226 ALHAQALGSLQEAQLCCEGALE 247
>gi|297682686|ref|XP_002819043.1| PREDICTED: LOW QUALITY PROTEIN: G-protein coupled receptor 124
[Pongo abelii]
Length = 1338
Score = 82.0 bits (201), Expect = 5e-13, Method: Composition-based stats.
Identities = 46/131 (35%), Positives = 67/131 (51%), Gaps = 1/131 (0%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L L N I+ + P AF L+R+DLS N+I + + FQGL L L ++ N + L
Sbjct: 112 KLDLRNNIISTVQPGAFLGLGELKRLDLSNNRIGCLTXETFQGLPRLLRLNISGNIFSSL 171
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTKCFAPSHIKGQNILD 246
GVF EL L+ + + CDCHL WL W + R +L T C PS + Q +
Sbjct: 172 QPGVFDELPALKVVDLGTEFLTCDCHLRWLLPWAQNRSLQLSERTLCAYPSALHAQALGS 231
Query: 247 IPEHEFKCSGS 257
+ E + C G+
Sbjct: 232 LQEAQLCCEGA 242
Score = 50.1 bits (118), Expect = 0.002, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 1 MPRTL----NNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGL 55
+PR L + N + L GVF EL L+ + + CDCHL WL W + R +L
Sbjct: 155 LPRLLRLNISGNIFSSLQPGVFDELPALKVVDLGTEFLTCDCHLRWLLPWAQNRSLQLSE 214
Query: 56 YTKCFAPSHIKGQNILDIPEHEFKCSGPVE 85
T C PS + Q + + E + C G +E
Sbjct: 215 RTLCAYPSALHAQALGSLQEAQLCCEGALE 244
>gi|119926497|dbj|BAF43273.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 181
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 9/169 (5%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC + L VP +P L+L+ N IT+L P F + L+++ L
Sbjct: 11 ACPARCSCSGTQVDCDRRSLASVPAGIPTNAQILQLQVNQITKLEPGVFDHLVNLQQLWL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
+ NQ+ + F L SL L+NN L +PDG FA L L + + N + C C +
Sbjct: 71 NNNQLQALPAGVFDRLGSLQRFDLSNNQLKSVPDGAFARLSSLTHVWLHTNPWDCQCTDI 130
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L W+ ++ + H G + P+ KCSG++ R+
Sbjct: 131 LYLSGWVAQHSGI-------VREHWVGSSWTVNPDSA-KCSGTNTPVRA 171
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKV--LLYSYISNNFKR 351
+CP C C+ VDC + L VP +P T + ++++ K+ ++ ++ N +
Sbjct: 11 ACPARCSCSGTQVDCDRRSLASVPAGIP--TNAQILQLQVNQITKLEPGVFDHLVNLQQL 68
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
W N N + LP F L+R L N + +P AFA L +
Sbjct: 69 WLNN------NQLQALPAGVFDRLGSLQRFDLSNNQLKSVPDGAFARLSSLTHV 116
>gi|50086821|gb|AAT70291.1| variable lymphocyte receptor [Petromyzon marinus]
Length = 163
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 81/168 (48%), Gaps = 14/168 (8%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C E+ L VP +P T L L N IT+L P F + +L ++L
Sbjct: 9 ACPSQCSCSGTQVNCHERSLASVPAGIPTTTQVLYLYTNQITKLEPGVFDSLTQLTYLNL 68
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
+ NQ++ + F L LT L L+ N L +P G F L L + + N + C+C +
Sbjct: 69 AVNQLTALPAGVFDKLPKLTHLVLHTNQLKSIPRGAFDNLKSLTHIWLLNNPWDCECSDI 128
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETR 262
+L W+ ++ + +++G +D KCSG++ R
Sbjct: 129 LYLKNWIVQHASI---------VNLQGHGGVD----NVKCSGTNTPVR 163
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C E+ L VP +P TT++ Y+ + +++ K L + ++ + T
Sbjct: 9 ACPSQCSCSGTQVNCHERSLASVPAGIP-TTTQVLYLYT-NQITK--LEPGVFDSLTQLT 64
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N +T LP F +L + L N + +P AF N K L +
Sbjct: 65 --YLNLAVNQLTALPAGVFDKLPKLTHLVLHTNQLKSIPRGAFDNLKSLTHI 114
>gi|410957858|ref|XP_003985541.1| PREDICTED: leucine-rich repeat LGI family member 2, partial [Felis
catus]
Length = 582
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 26/201 (12%)
Query: 97 CPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPK-------------- 142
CP C C + C G + VP ++P + L L +E+ +
Sbjct: 73 CPATCSCTKESIICV--GSSWVPRIVPGDISSLSLVNGTFSEIKDRMFSHLPSLQLLLLN 130
Query: 143 ----------AFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
AFA L + + N+I ++ +AF+GL+ LT L+L NN++ LP VF
Sbjct: 131 SNSFTAIRDDAFAGLFHLEYLFIEGNKIETISRNAFRGLRDLTHLSLANNHIKALPRDVF 190
Query: 193 AELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEF 252
++L L L + N F CDC WL+ WLK C P + + + D+P ++
Sbjct: 191 SDLDSLIELDLRGNKFECDCKAKWLYLWLKMTNSTVSDVLCIGPPEYQEKTLNDVPSFDY 250
Query: 253 KCSGSSMETRSKIYREECSTD 273
+C+ + + + S D
Sbjct: 251 ECTTTDFVVHQTLPYQSVSVD 271
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L NN++ LP VF++L L L + N F CDC WL+ WLK C P
Sbjct: 176 SLANNHIKALPRDVFSDLDSLIELDLRGNKFECDCKAKWLYLWLKMTNSTVSDVLCIGPP 235
Query: 64 HIKGQNILDIPEHEFKCS 81
+ + + D+P +++C+
Sbjct: 236 EYQEKTLNDVPSFDYECT 253
>gi|50086775|gb|AAT70268.1| variable lymphocyte receptor [Petromyzon marinus]
Length = 212
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 60/113 (53%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C E+ L VP +P T L L N IT+L P F + +L R+DL
Sbjct: 9 ACPSQCSCSGTQVNCHERSLASVPAGIPTTTQVLYLYTNQITKLEPGVFDSLTQLTRLDL 68
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
NQ++ + F L LT L L N LT LP GVF + +L L +++N
Sbjct: 69 YNNQLTVLPAGVFDSLTQLTYLNLAVNQLTALPVGVFDRVTQLTILALNDNQL 121
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C E+ L VP +P TT++ Y+ + +++ K+ F T
Sbjct: 9 ACPSQCSCSGTQVNCHERSLASVPAGIP-TTTQVLYLYT-NQITKL-----EPGVFDSLT 61
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+R L N +T LP F + +L + L N +T LP F +L +
Sbjct: 62 QLTRLDLYNNQLTVLPAGVFDSLTQLTYLNLAVNQLTALPVGVFDRVTQLTIL 114
>gi|281346890|gb|EFB22474.1| hypothetical protein PANDA_005480 [Ailuropoda melanoleuca]
Length = 1113
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 65/128 (50%), Gaps = 1/128 (0%)
Query: 131 LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDG 190
L N I+ + P AF L+R+DLS N+I + + FQGL L L ++ N + L G
Sbjct: 10 LRNNVISTVQPGAFLGLGELKRLDLSNNRIGCLTSETFQGLPRLLRLNISGNIFSSLQPG 69
Query: 191 VFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTKCFAPSHIKGQNILDIPE 249
VF EL L+ L + CDC L WL W + R +L +T C P + Q + + E
Sbjct: 70 VFDELPALKVLDLGTEYLTCDCRLRWLLSWARNRSLQLSEHTLCVYPRALHAQALGGLQE 129
Query: 250 HEFKCSGS 257
+ +C G+
Sbjct: 130 AQLRCEGA 137
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 1 MPRTL----NNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGL 55
+PR L + N + L GVF EL L+ L + CDC L WL W + R +L
Sbjct: 50 LPRLLRLNISGNIFSSLQPGVFDELPALKVLDLGTEYLTCDCRLRWLLSWARNRSLQLSE 109
Query: 56 YTKCFAPSHIKGQNILDIPEHEFKCSGPVEKPT 88
+T C P + Q + + E + +C G +E T
Sbjct: 110 HTLCVYPRALHAQALGGLQEAQLRCEGALELHT 142
>gi|126507840|gb|ABO15192.1| variable lymphocyte receptor B diversity region [Petromyzon
marinus]
Length = 170
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 12/169 (7%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC K L VP +P T LRL +N IT+L F + LR + L
Sbjct: 1 ACPSQCSCSGTTVDCSGKSLASVPTGIPTTTQILRLYRNQITKLELGVFDSLANLRELHL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
+NQ+S + F L +L L L+ L +P G F L L + + N + C C +
Sbjct: 61 GENQLSALPAGVFDRLGNLQKLWLHTIQLKNIPRGAFDNLKSLTYIYLFSNPWDCACSDI 120
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L RW+ ++P + ++ ++ +CSG++ R+
Sbjct: 121 LYLSRWISQHPGV-----------LRNAGSYNVNPDSARCSGTNTPVRA 158
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 8/110 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTEL-TYMVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ VDC K L VP +P T L Y I +++ + ++ ++N
Sbjct: 1 ACPSQCSCSGTTVDCSGKSLASVPTGIPTTTQILRLYRNQITKLE-LGVFDSLAN----- 54
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
R L +N ++ LP F L+++ L + +P AF N K L
Sbjct: 55 -LRELHLGENQLSALPAGVFDRLGNLQKLWLHTIQLKNIPRGAFDNLKSL 103
>gi|76161639|gb|ABA39916.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 171
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 65/133 (48%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C K L VP +P T L L IT+L P F L+++ L
Sbjct: 1 ACPSQCSCSGAEVRCVSKSLASVPAGIPITTQSLSLHYTQITKLEPGVFDRLVNLQKLYL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
S NQ++ + F L +L LTL NN L P G F L L + + N + C C +
Sbjct: 61 SGNQLTSLPAGVFDRLVNLQELTLYNNQLKSFPRGAFDNLKSLTHIWLYNNPWDCACSDI 120
Query: 215 SWLHRWLKRYPRL 227
+L RW+ ++P L
Sbjct: 121 LYLSRWISQHPGL 133
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 47/114 (41%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELT-YMVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ V C K L VP +P T L+ + I +++ + F R
Sbjct: 1 ACPSQCSCSGAEVRCVSKSLASVPAGIPITTQSLSLHYTQITKLEPGV--------FDRL 52
Query: 353 TNRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N + L N +T LP F L+ + L N + P AF N K L +
Sbjct: 53 VNLQKLYLSGNQLTSLPAGVFDRLVNLQELTLYNNQLKSFPRGAFDNLKSLTHI 106
>gi|260788770|ref|XP_002589422.1| hypothetical protein BRAFLDRAFT_77868 [Branchiostoma floridae]
gi|229274599|gb|EEN45433.1| hypothetical protein BRAFLDRAFT_77868 [Branchiostoma floridae]
Length = 534
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 135/323 (41%), Gaps = 32/323 (9%)
Query: 85 EKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAF 144
+K G +C C G +CR +GL VP LP T L L N+IT L F
Sbjct: 16 QKTAGWTTPSMACDGNC---GGDCNCRGRGLTSVPQHLPTDITRLDLSYNNITTLSQSDF 72
Query: 145 ANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRIS 204
+ Y L + L+ N I+ + D F L L +L+L++N+LT + V+ L + + +S
Sbjct: 73 SRYSSLTALSLNNNGITSIKADVFVNLPQLETLSLSHNSLTTISLTVYDTLVSIG-VDLS 131
Query: 205 ENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE-FKC--SGSSMET 261
N + CDC + + R + + +C P++++G+++L E E C +GSS
Sbjct: 132 NNPWQCDCRMLPIKRGMTGFRYSDERFRCAGPANLEGKSLLLAVEPEDLNCEDTGSSPGG 191
Query: 262 RSKIYREECSTDFHPYNS-------CPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLN 314
+ + S D P + K G P +CR L
Sbjct: 192 SA----DGSSPDKMPNKMKKMLVLLLIILKDVGL------TPACSSSCSSYCECRYMSLT 241
Query: 315 KVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFA 373
VP LP TEL + L + ++F R++N L+ N I+E+ AF
Sbjct: 242 TVPQDLPTYITEL-------YLSNNALTTLNQSDFSRYSNLLFLYLQSNQISEINSGAFC 294
Query: 374 NYKRLRRIRLEQNDITELPPKAF 396
N L + + N +T L F
Sbjct: 295 NLTSLAFLYINNNQLTSLTADMF 317
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 101/274 (36%), Gaps = 71/274 (25%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFI-----------------------CDCHL 40
+LNNN +T + VF L +L TL +S NS CDC +
Sbjct: 82 SLNNNGITSIKADVFVNLPQLETLSLSHNSLTTISLTVYDTLVSIGVDLSNNPWQCDCRM 141
Query: 41 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHE-FKCSGPVEKPTGECAAEPSCPH 99
+ R + + +C P++++G+++L E E C P G
Sbjct: 142 LPIKRGMTGFRYSDERFRCAGPANLEGKSLLLAVEPEDLNCEDTGSSPGGSADGSSPDKM 201
Query: 100 PCRCADGIV-----------------------DCREKGLNKVPILLPEATTELRLEQNDI 136
P + +V +CR L VP LP TEL L N +
Sbjct: 202 PNKMKKMLVLLLIILKDVGLTPACSSSCSSYCECRYMSLTTVPQDLPTYITELYLSNNAL 261
Query: 137 TELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL--------- 187
T L F+ Y L + L NQIS++ AF L SL L +NNN LT L
Sbjct: 262 TTLNQSDFSRYSNLLFLYLQSNQISEINSGAFCNLTSLAFLYINNNQLTSLTADMFMGLN 321
Query: 188 ---------------PDGVFAELFRLRTLRISEN 206
G F L R+R+L +S+N
Sbjct: 322 NLLLLFLNNNTISTIAAGAFINLQRIRSLDLSQN 355
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 3/112 (2%)
Query: 136 ITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKS--LTSLTLNNNNLTYLPDGVFA 193
I+ + AF N +R+R +DLS+N I +A L S L + L+ N + LP +
Sbjct: 333 ISTIAAGAFINLQRIRSLDLSQNHIDTFPTEALSNLNSSMLQLVDLSYNQMETLPPTAY- 391
Query: 194 ELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
++ ++ IS N + CDC + + + +P C PS++ G+++L
Sbjct: 392 DILAANSVDISNNPWQCDCRMLPFKQRMTSFPAFEKQIICAEPSNLSGKSLL 443
>gi|76162273|gb|ABA40209.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 192
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 83/183 (45%), Gaps = 18/183 (9%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C K L VP +P T L + N IT+L P F + L+ + L
Sbjct: 1 ACPSQCSCSGTHVNCERKRLTSVPAGIPTTTQTLWGDSNQITKLEPGVFDSLVNLQHLHL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF------I 209
+ N+++ + F L LT L L+NN LT LP GVF L L+ + +S N
Sbjct: 61 NSNKLTAIPAGVFDRLTQLTRLDLDNNQLTVLPAGVFDSLVNLQRVDLSNNQLKSIPRGA 120
Query: 210 CDCHLSWLHRWLKRYP-----RLGLYTKCFAPSHIKGQNILDIPEH----EFKCSGSSME 260
D S H WL P LY K + H +I++ H KCSG++
Sbjct: 121 FDNLKSLTHIWLSNNPWDCECSDILYLKNWIVQH---ASIVNPSGHGGVDNVKCSGTNTP 177
Query: 261 TRS 263
R+
Sbjct: 178 VRA 180
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 22/132 (16%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKV----------LLYS 343
+CP C C+ V+C K L VP +P TT T +++ K+ L +
Sbjct: 1 ACPSQCSCSGTHVNCERKRLTSVPAGIP--TTTQTLWGDSNQITKLEPGVFDSLVNLQHL 58
Query: 344 YISNN---------FKRWTNRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPP 393
++++N F R T +R L+ N +T LP F + L+R+ L N + +P
Sbjct: 59 HLNSNKLTAIPAGVFDRLTQLTRLDLDNNQLTVLPAGVFDSLVNLQRVDLSNNQLKSIPR 118
Query: 394 KAFANYKRLRRM 405
AF N K L +
Sbjct: 119 GAFDNLKSLTHI 130
>gi|50086877|gb|AAT70319.1| variable lymphocyte receptor [Petromyzon marinus]
gi|50086883|gb|AAT70322.1| variable lymphocyte receptor [Petromyzon marinus]
Length = 263
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 66/130 (50%), Gaps = 1/130 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC K L VP +P T L L N +T+L P F + L+++ L
Sbjct: 21 ACPSQCSCSGTTVDCSGKSLASVPAAIPITTQRLWLSNNQLTKLDPGVFDSLVNLQQLYL 80
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ+S + F L LT+L L+NN L +P G F L L + + N + C C +
Sbjct: 81 GGNQLSALPDGVFDKLTQLTNLYLHNNQLKSVPRGAFDNLKSLTHIWLYNNPWDCACSDI 140
Query: 215 SWLHRWLKRY 224
+L WL ++
Sbjct: 141 LYLSGWLGQH 150
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C+ VDC K L VP +P T L + + ++D + S + N ++
Sbjct: 21 ACPSQCSCSGTTVDCSGKSLASVPAAIPITTQRLWLSNNQLTKLDPGVFDSLV--NLQQ- 77
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N ++ LP F +L + L N + +P AF N K L +
Sbjct: 78 ----LYLGGNQLSALPDGVFDKLTQLTNLYLHNNQLKSVPRGAFDNLKSLTHI 126
>gi|426249860|ref|XP_004018666.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 1 [Ovis aries]
Length = 1042
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Query: 129 LRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLT 185
L L+ N+I+ E AF L ++ L N+I VA AF GL+ L L L N +
Sbjct: 350 LDLDHNEISGTIEDTSGAFTGLDSLSKLTLFGNKIKSVAKRAFSGLEGLEHLNLGENAIR 409
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTK-CFAPSHIKGQNI 244
+ F ++ L+ L IS +SF+CDC L WL WL G T C P +KGQ+I
Sbjct: 410 SVQFDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLLGRTLQGFVTATCAHPEALKGQSI 469
Query: 245 LDIPEHEFKC 254
+P F C
Sbjct: 470 FSVPPESFVC 479
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTK-CFAPS 63
L N + + F ++ L+ L IS +SF+CDC L WL WL G T C P
Sbjct: 403 LGENAIRSVQFDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLLGRTLQGFVTATCAHPE 462
Query: 64 HIKGQNILDIPEHEFKC 80
+KGQ+I +P F C
Sbjct: 463 ALKGQSIFSVPPESFVC 479
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 133 QNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
+N IT+LP KAF RL ++DL++N+I + FQGL SL L L NN++ L DG F
Sbjct: 197 KNRITQLPVKAF-KLPRLTQLDLNRNRIRLIEGLTFQGLDSLEVLRLQRNNISKLTDGAF 255
Query: 193 AELFRLRTLRIS 204
L R+ L +
Sbjct: 256 WGLARMHALHLG 267
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 106 GIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAV 165
+DC +GL +P LP T L L N + E+ P F + L+ + L+ N+++ A+
Sbjct: 50 DSLDCGGRGLAALPGDLPAWTRSLNLSYNKLAEIDPAGFEDLPNLQEVYLNNNELT--AI 107
Query: 166 DAFQGLKS-LTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ S + SL L +N + + L L +S N+
Sbjct: 108 PSLGAASSHIVSLFLQHNRIRSVEGSQLKAYLSLHVLDLSANNI 151
>gi|119926513|dbj|BAF43281.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 179
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 11/169 (6%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C V+C + L VP +P T L L N IT+L P F + L ++L
Sbjct: 11 ACPARCSCQGTAVNCDRRSLTSVPAGIPTTTQNLNLHVNQITKLEPAVFDSLTALTFLNL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ++ + F L LT L+L +N L +P G F L L + + N + C C +
Sbjct: 71 GNNQLTALPEGVFDKLTQLTHLSLRDNQLKSIPRGAFDNLKSLTHIWLYGNPWDCGCSDI 130
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L RW+ ++P + +G++ + +CSG++ R+
Sbjct: 131 LYLSRWISQHPGVVR----------RGESGYAVDPDHARCSGTNTPVRA 169
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C V+C + L VP +P T L V+ I +++ + S + F
Sbjct: 11 ACPARCSCQGTAVNCDRRSLTSVPAGIPTTTQNLNLHVNQITKLEPAVFDSLTALTF--- 67
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N +T LP F +L + L N + +P AF N K L +
Sbjct: 68 ----LNLGNNQLTALPEGVFDKLTQLTHLSLRDNQLKSIPRGAFDNLKSLTHI 116
>gi|224157325|ref|XP_002194109.1| PREDICTED: leucine-rich repeat-containing protein 17-like
[Taeniopygia guttata]
Length = 261
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 81/164 (49%), Gaps = 3/164 (1%)
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
+DC+E+ L V PE + L +N I +L F+ YK L+ +DL +N ISK+ +A
Sbjct: 62 LDCQERKLVFVAPDWPEDIKHMLLARNRIRKLKNNMFSKYKALKSLDLQQNDISKIETEA 121
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK--RYP 225
F GL LT+L L +N + L + +F L LR+ +N + C C L L L+
Sbjct: 122 FYGLDKLTTLLLQHNQIKTLSEEIFIYTPSLNYLRLYDNPWHCSCELETLVTMLQVPTNR 181
Query: 226 RLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREE 269
LG Y KC P +K Q + I + CS + I +E+
Sbjct: 182 NLGNYAKCVYPIELKNQKLKQIKADQL-CSEEDRQDPKNIKQEK 224
>gi|119926509|dbj|BAF43279.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 163
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 67/133 (50%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC K L VP +P T EL L N IT+L P F + +L + L
Sbjct: 11 ACPARCSCSGTTVDCGRKSLASVPAAIPTTTRELWLGSNQITKLEPGVFDSLTQLTYLKL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ++ + F L LT L+L +N L +P G F L L + + N + C+C +
Sbjct: 71 HTNQLTALPEGVFDKLTQLTHLSLRDNQLKSIPKGAFDNLKSLTHIWLFNNPWDCECSDI 130
Query: 215 SWLHRWLKRYPRL 227
+L W+ ++ +
Sbjct: 131 LYLKNWIVQHASI 143
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ VDC K L VP +P T EL + +++ K L + ++ + T
Sbjct: 11 ACPARCSCSGTTVDCGRKSLASVPAAIPTTTREL--WLGSNQITK--LEPGVFDSLTQLT 66
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+L N +T LP F +L + L N + +P AF N K L +
Sbjct: 67 --YLKLHTNQLTALPEGVFDKLTQLTHLSLRDNQLKSIPKGAFDNLKSLTHI 116
>gi|284010972|dbj|BAI66961.1| variable lymphocyte receptor B [Eptatretus burgeri]
Length = 255
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 75/171 (43%), Gaps = 15/171 (8%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C+ + L VP +P +TT L E N + LP F +L + L
Sbjct: 23 ACPSRCSCSGTQVGCQYESLTSVPSGIPSSTTYLSFEDNKLQSLPHGVFDKLTQLTYLSL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
S NQ+ + F L L L L NN L +PDGVF L L+ + + N + C C +
Sbjct: 83 STNQLQSLPNGVFDKLTQLKELHLYNNQLKSVPDGVFDRLTSLQGIWLYNNPWDCTCPGI 142
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKI 265
+L W+ ++ S I I KCSGS RS I
Sbjct: 143 RYLSEWINKH------------SGIISDG--SINPDSAKCSGSGKPVRSII 179
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V C+ + L VP +P +TT L++ + L S F + T
Sbjct: 23 ACPSRCSCSGTQVGCQYESLTSVPSGIPSSTTYLSF-------EDNKLQSLPHGVFDKLT 75
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L N + LP F +L+ + L N + +P F L+ +
Sbjct: 76 QLTYLSLSTNQLQSLPNGVFDKLTQLKELHLYNNQLKSVPDGVFDRLTSLQGI 128
>gi|119926531|dbj|BAF43290.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 179
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 11/169 (6%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V CR + L VP +P T L L N IT+L P F + L +DL
Sbjct: 11 ACPARCSCSGTTVHCRSRSLASVPAGIPTTTLVLYLYTNQITKLEPGVFDSLTLLTYLDL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
S NQ++ + F L +L L L+ N L +P G F L L + + N + C C +
Sbjct: 71 SNNQLTALPEGVFDRLGNLQQLGLHVNQLKSIPRGAFDNLKSLTHIWLFNNPWDCACSDI 130
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L RW+ ++P + +G++ + +CSG++ R+
Sbjct: 131 LYLSRWISQHPGVVR----------RGESGYAVDPDHARCSGTNTPVRA 169
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V CR + L VP +P TT L + +++ K+ + S +
Sbjct: 11 ACPARCSCSGTTVHCRSRSLASVPAGIP--TTTLVLYLYTNQITKLEPGVFDSLTLLTYL 68
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L N +T LP F L+++ L N + +P AF N K L +
Sbjct: 69 D----LSNNQLTALPEGVFDRLGNLQQLGLHVNQLKSIPRGAFDNLKSLTHI 116
>gi|441619530|ref|XP_004088593.1| PREDICTED: relaxin receptor 1 [Nomascus leucogenys]
Length = 661
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 65/111 (58%), Gaps = 1/111 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
S P C C +DC E L VP + T + L+ N I +LPP F NY L+++ L
Sbjct: 4 SVPVQCLCRGLELDCDETNLRAVPSV-SSNVTAMSLQWNLIRKLPPDCFKNYHDLQKLYL 62
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
N+I+ +++ AF+GL SLT L L++N +T+L GVF +L RL L I +N
Sbjct: 63 QNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDN 113
Score = 38.1 bits (87), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 80/200 (40%), Gaps = 35/200 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N +T+L GVF +L RL L I +N HLS + +P
Sbjct: 86 LSHNRITFLKPGVFEDLHRLEWLIIEDN------HLSRI-----------------SPPT 122
Query: 65 IKGQN--ILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCRE-KGLNKVPIL 121
G N IL + + P +P C H R ++ L + +
Sbjct: 123 FYGLNSLILLVLMNNVLTRLP---------DKPLCQHMPRLHWLDLEGNHIHNLRNLTFI 173
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
T L + +N I L FA ++L +DL N+I + F+ LK L+ L L+
Sbjct: 174 SCSNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSY 233
Query: 182 NNLTYLPDGVFAELFRLRTL 201
N + + F L +L++L
Sbjct: 234 NPIQKIQANQFDYLVKLKSL 253
>gi|359080553|ref|XP_003588016.1| PREDICTED: G-protein coupled receptor 124 [Bos taurus]
Length = 357
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 1/128 (0%)
Query: 131 LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDG 190
L N I+ + P AF L+R+DLS N+I + FQGL L L ++ N + L G
Sbjct: 23 LRNNVISTVQPGAFLGLGELKRLDLSNNRIGCLTSGTFQGLPRLLRLNISGNIFSSLQPG 82
Query: 191 VFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTKCFAPSHIKGQNILDIPE 249
VF EL L+ + CDCHL WL W + R +L T C PS + Q + + E
Sbjct: 83 VFDELPALKAVDFGTEFLTCDCHLRWLLPWAQNRSLQLSERTLCAYPSALHAQALAGLQE 142
Query: 250 HEFKCSGS 257
+ +C G+
Sbjct: 143 AQLRCEGA 150
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 1 MPRTL----NNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGL 55
+PR L + N + L GVF EL L+ + CDCHL WL W + R +L
Sbjct: 63 LPRLLRLNISGNIFSSLQPGVFDELPALKAVDFGTEFLTCDCHLRWLLPWAQNRSLQLSE 122
Query: 56 YTKCFAPSHIKGQNILDIPEHEFKCSGPVEKPT 88
T C PS + Q + + E + +C G +E T
Sbjct: 123 RTLCAYPSALHAQALAGLQEAQLRCEGALELHT 155
>gi|329664820|ref|NP_001192440.1| leucine-rich repeat-containing G-protein coupled receptor 4
precursor [Bos taurus]
gi|296479771|tpg|DAA21886.1| TPA: leucine-rich repeat-containing G protein-coupled receptor 4
[Bos taurus]
Length = 951
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 64/122 (52%), Gaps = 3/122 (2%)
Query: 86 KPTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAF 144
+P+G AA P C PC C D VDC KGL VP L T L + N+IT+LP AF
Sbjct: 20 EPSG--AAPPLCAAPCSCDGDRRVDCSGKGLTAVPEGLSAFTQLLDISMNNITQLPEDAF 77
Query: 145 ANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRIS 204
N+ L + L+ N +S + A GLK L LTL NN L +P L L++LR+
Sbjct: 78 KNFPFLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSSLQSLRLD 137
Query: 205 EN 206
N
Sbjct: 138 AN 139
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 54/123 (43%), Gaps = 33/123 (26%)
Query: 284 KPTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLY 342
+P+G AA P C PC C D VDC KGL VP E + T ++ I
Sbjct: 20 EPSG--AAPPLCAAPCSCDGDRRVDCSGKGLTAVP----EGLSAFTQLLDI--------- 64
Query: 343 SYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
N+IT+LP AF N+ L +RL ND++ + PKA + K L
Sbjct: 65 -----------------SMNNITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKEL 107
Query: 403 RRM 405
+ +
Sbjct: 108 KVL 110
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 10/150 (6%)
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL--NKVPILL 122
I NI +PE FK + P + + S HP + G+ + + L N++ +
Sbjct: 64 ISMNNITQLPEDAFK-NFPFLEELRLAGNDLSFIHP-KALSGLKELKVLTLQNNQLKTVP 121
Query: 123 PEAT------TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
EA LRL+ N IT +P +F +LR + L N +++V V L +L +
Sbjct: 122 SEAIRGLSSLQSLRLDANHITSVPEDSFEGLTQLRHLWLDDNSLTEVPVHPLSNLPTLQA 181
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
LTL N ++ +PD F L L L + N
Sbjct: 182 LTLALNKISSIPDFAFTNLSSLVVLHLHNN 211
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 36/207 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
++ NN+T LP+ F L LR++ N LS++H P+ A S
Sbjct: 64 ISMNNITQLPEDAFKNFPFLEELRLAGND------LSFIH------PK--------ALSG 103
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPE 124
+K +L + ++ K + P E G + + + + VP E
Sbjct: 104 LKELKVLTLQNNQLK-TVPSEAIRGLSSLQS------------LRLDANHITSVPEDSFE 150
Query: 125 ATTELR---LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
T+LR L+ N +TE+P +N L+ + L+ N+IS + AF L SL L L+N
Sbjct: 151 GLTQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHN 210
Query: 182 NNLTYLPDGVFAELFRLRTLRISENSF 208
N + L F L L TL ++ N+
Sbjct: 211 NKIKSLGQHCFDGLDNLETLDLNYNNL 237
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N I +LP +F L I L +NQI ++ D FQGL SL L L+ N + +
Sbjct: 348 LDLSYNSIKDLP--SFNGCHALEEISLQRNQIHQIKEDTFQGLTSLKILDLSRNLIHEID 405
Query: 189 DGVFAELFRLRTLRISEN 206
D FA+L + L +S N
Sbjct: 406 DRAFAKLGSITNLDVSFN 423
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
A E+ L++N I ++ F L+ +DLS+N I ++ AF L S+T+L ++ N
Sbjct: 365 HALEEISLQRNQIHQIKEDTFQGLTSLKILDLSRNLIHEIDDRAFAKLGSITNLDVSFNE 424
Query: 184 LTYLP 188
LT P
Sbjct: 425 LTSFP 429
>gi|126507782|gb|ABO15163.1| variable lymphocyte receptor B diversity region [Petromyzon
marinus]
Length = 170
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 12/169 (7%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC K L VP +P T LRL +N IT+L F + LR + L
Sbjct: 1 ACPSQCSCSGTTVDCSGKSLASVPTGIPTTTQILRLYRNQITKLELGVFDSLANLRELHL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
+NQ+S + F L +L L L+ L +P G F L L + + N + C C +
Sbjct: 61 GENQLSALPAGVFDRLGNLQKLWLHTIQLKNIPRGAFDNLKSLTYIYLFNNPWDCACSDI 120
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L RW+ ++P + ++ ++ +CSG++ R+
Sbjct: 121 LYLSRWISQHPGV-----------LRNAGSYNVNPDSARCSGTNTPVRA 158
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 8/110 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTEL-TYMVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ VDC K L VP +P T L Y I +++ + ++ ++N
Sbjct: 1 ACPSQCSCSGTTVDCSGKSLASVPTGIPTTTQILRLYRNQITKLE-LGVFDSLAN----- 54
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
R L +N ++ LP F L+++ L + +P AF N K L
Sbjct: 55 -LRELHLGENQLSALPAGVFDRLGNLQKLWLHTIQLKNIPRGAFDNLKSL 103
>gi|70955581|gb|AAZ16352.1| variable lymphocyte receptor B [Eptatretus burgeri]
Length = 273
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 78/182 (42%), Gaps = 19/182 (10%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C KGL VP +P + T L L+ N + LP F +L ++L
Sbjct: 23 ACPSRCSCSGTTVNCYNKGLTSVPSGIPSSATHLELQDNKLQFLPSGVFDKLTKLTHLEL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF------- 208
NQ+ + F L SLT L L N L LP GVF +L +L TL + N
Sbjct: 83 WNNQLQSLPSGVFDKLTSLTYLHLCCNKLQSLPHGVFDKLTKLTTLVLYNNQLKSVPDGV 142
Query: 209 ---ICDCHLSWLHR--WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+ WLH W PR+ ++ + K Q KCSGS RS
Sbjct: 143 FDRLTSLQHIWLHDNPWDCSCPRIDYLSRWLNKNSQKEQG-------SAKCSGSGKPVRS 195
Query: 264 KI 265
I
Sbjct: 196 II 197
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 45/113 (39%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C KGL VP +P + T L + D L + S F + T
Sbjct: 23 ACPSRCSCSGTTVNCYNKGLTSVPSGIPSSATHL------ELQDNKLQF-LPSGVFDKLT 75
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L N + LP F L + L N + LP F +L +
Sbjct: 76 KLTHLELWNNQLQSLPSGVFDKLTSLTYLHLCCNKLQSLPHGVFDKLTKLTTL 128
>gi|193785216|dbj|BAG54369.1| unnamed protein product [Homo sapiens]
Length = 759
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 66/132 (50%), Gaps = 4/132 (3%)
Query: 127 TELRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
T L+ N+I+ E AF+ L ++ L N+I VA AF GL+ L L L N
Sbjct: 24 TGWDLDHNEISGTIEDTSGAFSGLDSLSKLTLFGNKIKSVAKRAFSGLEGLEHLNLGGNA 83
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAPSHIKGQ 242
+ + F ++ L+ L IS +SF+CDC L WL WL R + + C P +KGQ
Sbjct: 84 IRSVQFDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLIGRMLQAFVTAACAHPESLKGQ 143
Query: 243 NILDIPEHEFKC 254
+I +P F C
Sbjct: 144 SIFSVPPESFVC 155
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAPS 63
L N + + F ++ L+ L IS +SF+CDC L WL WL R + + C P
Sbjct: 79 LGGNAIRSVQFDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLIGRMLQAFVTAACAHPE 138
Query: 64 HIKGQNILDIPEHEFKC 80
+KGQ+I +P F C
Sbjct: 139 SLKGQSIFSVPPESFVC 155
>gi|256217721|ref|NP_001073982.2| carboxypeptidase N subunit 2 precursor [Homo sapiens]
Length = 545
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 114/258 (44%), Gaps = 20/258 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFI-----CDCHLSWLHR-WLKRYPRLGLYTK 58
L+NN L+ LP GVF +L L+ L + N+ L L R WL+R L
Sbjct: 200 LSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLS 259
Query: 59 CFAPSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKV 118
FA + L + + + P G A P C + + + + +
Sbjct: 260 IFA--SLGNLTFLSLQWNMLRV-----LPAGLFAHTP-----CLVGLSLTHNQLETVAEG 307
Query: 119 PILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLT 178
L L N IT LP F + + L ++ L N ++ + FQ L L L+
Sbjct: 308 TFAHLSNLRSLMLSYNAITHLPAGIFRDLEELVKLYLGSNNLTALHPALFQNLSKLELLS 367
Query: 179 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPR--LGLYTKCFAP 236
L+ N LT LP+G+F + L L + N + CDCHL++L WL++Y L + T C P
Sbjct: 368 LSKNQLTTLPEGIFDTNYNLFNLALHGNPWQCDCHLAYLFNWLQQYTDRLLNIQTYCAGP 427
Query: 237 SHIKGQNILDIPEHEFKC 254
+++KGQ + + E + C
Sbjct: 428 AYLKGQVVPALNEKQLVC 445
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 88/211 (41%), Gaps = 42/211 (19%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAP- 62
TLN N L LP+G+F L L +L + N L+ PR + F P
Sbjct: 127 TLNFNMLEALPEGLFQHLAALESLHLQGNQ-------------LQALPR-----RLFQPL 168
Query: 63 SHIK----GQNIL-DIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 117
+H+K QN+L +PE F ++ A P G +
Sbjct: 169 THLKTLNLAQNLLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKLGSLQ-------- 220
Query: 118 VPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSL 177
EL L+ N+I+ELPP+ F+ L R+ L +N I+ + + F L +LT L
Sbjct: 221 ----------ELFLDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLSIFASLGNLTFL 270
Query: 178 TLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+L N L LP G+FA L L ++ N
Sbjct: 271 SLQWNMLRVLPAGLFAHTPCLVGLSLTHNQL 301
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 132/361 (36%), Gaps = 75/361 (20%)
Query: 93 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRR 152
A+P CP C C V C ++ L VP+ +P T + + T L +AF + L +
Sbjct: 19 AQP-CPMGCDCFVQEVFCSDEELATVPLDIPPYTKNIIFVETSFTTLETRAFGSNPNLTK 77
Query: 153 IDLSKNQISKVAVDAFQGL------------------------KSLTSLTLNNNNLTYLP 188
+ Q+ + DAF GL SL LTLN N L LP
Sbjct: 78 VVFLNTQLCQFRPDAFGGLPRLEDLEVTGSSFLNLSTNIFSNLTSLGKLTLNFNMLEALP 137
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAP-SHIK----GQN 243
+G+F L L +L + N L+ PR + F P +H+K QN
Sbjct: 138 EGLFQHLAALESLHLQGNQ-------------LQALPR-----RLFQPLTHLKTLNLAQN 179
Query: 244 IL-DIPEHEFK--CSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAE--PSCPHP 298
+L +PE F S +++ + F S +E P
Sbjct: 180 LLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQ 239
Query: 299 CRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL------------------ 340
C + + + + +P+ + + LT++ + +VL
Sbjct: 240 LFCLERLW-LQRNAITHLPLSIFASLGNLTFLSLQWNMLRVLPAGLFAHTPCLVGLSLTH 298
Query: 341 --LYSYISNNFKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFA 397
L + F +N RS L N IT LP F + + L ++ L N++T L P F
Sbjct: 299 NQLETVAEGTFAHLSNLRSLMLSYNAITHLPAGIFRDLEELVKLYLGSNNLTALHPALFQ 358
Query: 398 N 398
N
Sbjct: 359 N 359
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 359 LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
L+ N+I+ELPP+ F+ L R+ L++N IT LP FA+ L
Sbjct: 224 LDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLSIFASLGNL 267
>gi|348575410|ref|XP_003473482.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 1-like [Cavia porcellus]
Length = 1089
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 110/258 (42%), Gaps = 18/258 (6%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L NN++ L DG F L ++ L + N+ + + + L+ L +L L + H
Sbjct: 242 LQRNNISRLTDGAFWGLSKMHVLHLEYNNLV-EVNSGSLY-GLTALHQLHLSNNAISRIH 299
Query: 65 IKG----QNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
G Q + ++ + E+ E ++ I + KGL + I
Sbjct: 300 RDGWSFCQKLHELILSFNNLTRLDEESLAELSSLSILRLSHNAISHIAEGAFKGLRNLRI 359
Query: 121 LLPEATTELRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSL 177
L L+ N+I+ E AFA L ++ L N+I VA AF GL+ L L
Sbjct: 360 L--------DLDHNEISGTIEDTSGAFAGLDSLSKLTLFGNKIKSVAKRAFSGLEGLEHL 411
Query: 178 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAP 236
L N + + F ++ L+ L I+ SF+CDC L WL WL R + + C P
Sbjct: 412 NLGENAIRSVQFDAFVKMKNLKELHINSESFLCDCQLKWLPPWLVSRMLQASVTAICAHP 471
Query: 237 SHIKGQNILDIPEHEFKC 254
+KGQ+I +P F C
Sbjct: 472 ESLKGQSIFSVPPESFVC 489
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 133 QNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
+N IT+LP KAF RL ++DL++N+I + FQGL SL L L NN++ L DG F
Sbjct: 197 KNRITQLPVKAF-KLPRLTQLDLNRNRIRLIEGLTFQGLDSLEVLKLQRNNISRLTDGAF 255
Query: 193 AELFRLRTLRISENSFI 209
L ++ L + N+ +
Sbjct: 256 WGLSKMHVLHLEYNNLV 272
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 47/124 (37%), Gaps = 23/124 (18%)
Query: 106 GIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRI------------ 153
+DC +GL VP +P T L L N ++E+ P F + L+ +
Sbjct: 50 DALDCGGRGLTAVPGDMPAWTRSLNLSYNKLSEIDPAGFEDMPNLQEVYLNNNELTAIPS 109
Query: 154 -----------DLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLR 202
L N+I V + SL L L NN+T + F RLR L
Sbjct: 110 LGAASVHVISLSLQHNKIRSVEGSQLKAYLSLEVLDLGLNNITEIRSTCFPHGLRLRELN 169
Query: 203 ISEN 206
++ N
Sbjct: 170 LASN 173
>gi|145207281|gb|AAH42334.2| Carboxypeptidase N, polypeptide 2 [Homo sapiens]
Length = 545
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 114/258 (44%), Gaps = 20/258 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFI-----CDCHLSWLHR-WLKRYPRLGLYTK 58
L+NN L+ LP GVF +L L+ L + N+ L L R WL+R L
Sbjct: 200 LSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLS 259
Query: 59 CFAPSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKV 118
FA + L + + + P G A P C + + + + +
Sbjct: 260 IFA--SLGNLTFLSLQWNMLRV-----LPAGLFAHTP-----CLVGLSLTHNQLETVAEG 307
Query: 119 PILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLT 178
L L N IT LP F + + L ++ L N ++ + FQ L L L+
Sbjct: 308 TFAHLSNLRSLMLSYNAITHLPAGIFRDLEELVKLYLGSNNLTALHPALFQNLSKLELLS 367
Query: 179 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPR--LGLYTKCFAP 236
L+ N LT LP+G+F + L L + N + CDCHL++L WL++Y L + T C P
Sbjct: 368 LSKNQLTTLPEGIFDTNYNLFNLALHGNPWQCDCHLAYLFNWLQQYTDRLLNIQTYCAGP 427
Query: 237 SHIKGQNILDIPEHEFKC 254
+++KGQ + + E + C
Sbjct: 428 AYLKGQVVPALNEKQLVC 445
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 132/361 (36%), Gaps = 75/361 (20%)
Query: 93 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRR 152
A+P CP C C V C ++ L VP+ +P T + + T L +AF + L +
Sbjct: 19 AQP-CPMGCDCFVQEVFCSDEELATVPLDIPPYTKNIIFVETSFTTLETRAFGSNPNLTK 77
Query: 153 IDLSKNQISKVAVDAFQGL------------------------KSLTSLTLNNNNLTYLP 188
+ Q+ + DAF GL SL LTLN N L LP
Sbjct: 78 VVFLNTQLCQFRPDAFGGLPRLEDLEVTGSSFLNLSTNIFSNLTSLGKLTLNFNMLEALP 137
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAP-SHIK----GQN 243
+G+F L L +L + N L+ PR + F P +H+K QN
Sbjct: 138 EGLFQHLAALESLHLQGNR-------------LQALPR-----RLFQPLTHLKTLNLAQN 179
Query: 244 IL-DIPEHEFK--CSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAE--PSCPHP 298
+L +PE F S +++ + F S +E P
Sbjct: 180 LLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQ 239
Query: 299 CRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL------------------ 340
C + + + + +P+ + + LT++ + +VL
Sbjct: 240 LFCLERLW-LQRNAITHLPLSIFASLGNLTFLSLQWNMLRVLPAGLFAHTPCLVGLSLTH 298
Query: 341 --LYSYISNNFKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFA 397
L + F +N RS L N IT LP F + + L ++ L N++T L P F
Sbjct: 299 NQLETVAEGTFAHLSNLRSLMLSYNAITHLPAGIFRDLEELVKLYLGSNNLTALHPALFQ 358
Query: 398 N 398
N
Sbjct: 359 N 359
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 359 LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
L+ N+I+ELPP+ F+ L R+ L++N IT LP FA+ L
Sbjct: 224 LDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLSIFASLGNL 267
>gi|51173528|gb|AAA51921.2| carboxypeptidase N precursor [Homo sapiens]
Length = 545
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 114/258 (44%), Gaps = 20/258 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFI-----CDCHLSWLHR-WLKRYPRLGLYTK 58
L+NN L+ LP GVF +L L+ L + N+ L L R WL+R L
Sbjct: 200 LSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLS 259
Query: 59 CFAPSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKV 118
FA + L + + + P G A P C + + + + +
Sbjct: 260 IFA--SLGNLTFLSLQWNMLRV-----LPAGLFAHTP-----CLVGLSLTHNQLETVAEG 307
Query: 119 PILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLT 178
L L N IT LP F + + L ++ L N ++ + FQ L L L+
Sbjct: 308 TFAHLSNLRSLMLSYNAITHLPAGIFRDLEELVKLYLGSNNLTALHPALFQNLSKLELLS 367
Query: 179 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPR--LGLYTKCFAP 236
L+ N LT LP+G+F + L L + N + CDCHL++L WL++Y L + T C P
Sbjct: 368 LSKNQLTTLPEGIFDTNYNLFNLALHGNPWQCDCHLAYLFNWLQQYTDRLLNIQTYCAGP 427
Query: 237 SHIKGQNILDIPEHEFKC 254
+++KGQ + + E + C
Sbjct: 428 AYLKGQVVPALNEKQLVC 445
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 88/211 (41%), Gaps = 42/211 (19%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAP- 62
TLN N L LP+G+F L L +L + N L+ PR + F P
Sbjct: 127 TLNFNMLEALPEGLFQHLAALESLHLQGNQ-------------LQALPR-----RLFQPL 168
Query: 63 SHIK----GQNIL-DIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 117
+H+K QN+L +PE F ++ A P G +
Sbjct: 169 THLKTLNLAQNLLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKLGSLQ-------- 220
Query: 118 VPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSL 177
EL L+ N+I+ELPP+ F+ L R+ L +N I+ + + F L +LT L
Sbjct: 221 ----------ELFLDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLSIFASLGNLTFL 270
Query: 178 TLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+L N L LP G+FA L L ++ N
Sbjct: 271 SLQWNMLRVLPAGLFAHTPCLVGLSLTHNQL 301
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 132/361 (36%), Gaps = 75/361 (20%)
Query: 93 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRR 152
A+P CP C C V C ++ L VP+ +P T + + T L +AF + L +
Sbjct: 19 AQP-CPMGCDCFVQEVFCSDEELATVPLDIPPYTKNIIFVETSFTTLETRAFGSNPNLTK 77
Query: 153 IDLSKNQISKVAVDAFQGL------------------------KSLTSLTLNNNNLTYLP 188
+ Q+ + DAF GL SL LTLN N L LP
Sbjct: 78 VVFLNTQLCQFRPDAFGGLPRLEDLEVTGSSFLNLSTNIFSNLTSLGKLTLNFNMLEALP 137
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAP-SHIK----GQN 243
+G+F L L +L + N L+ PR + F P +H+K QN
Sbjct: 138 EGLFQHLAALESLHLQGNQ-------------LQALPR-----RLFQPLTHLKTLNLAQN 179
Query: 244 IL-DIPEHEFK--CSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAE--PSCPHP 298
+L +PE F S +++ + F S +E P
Sbjct: 180 LLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQ 239
Query: 299 CRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL------------------ 340
C + + + + +P+ + + LT++ + +VL
Sbjct: 240 LFCLERLW-LQRNAITHLPLSIFASLGNLTFLSLQWNMLRVLPAGLFAHTPCLVGLSLTH 298
Query: 341 --LYSYISNNFKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFA 397
L + F +N RS L N IT LP F + + L ++ L N++T L P F
Sbjct: 299 NQLETVAEGTFAHLSNLRSLMLSYNAITHLPAGIFRDLEELVKLYLGSNNLTALHPALFQ 358
Query: 398 N 398
N
Sbjct: 359 N 359
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 359 LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
L+ N+I+ELPP+ F+ L R+ L++N IT LP FA+ L
Sbjct: 224 LDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLSIFASLGNL 267
>gi|334302917|sp|P22792.3|CPN2_HUMAN RecName: Full=Carboxypeptidase N subunit 2; AltName:
Full=Carboxypeptidase N 83 kDa chain; AltName:
Full=Carboxypeptidase N large subunit; AltName:
Full=Carboxypeptidase N polypeptide 2; AltName:
Full=Carboxypeptidase N regulatory subunit; Flags:
Precursor
Length = 545
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 114/258 (44%), Gaps = 20/258 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFI-----CDCHLSWLHR-WLKRYPRLGLYTK 58
L+NN L+ LP GVF +L L+ L + N+ L L R WL+R L
Sbjct: 200 LSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLS 259
Query: 59 CFAPSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKV 118
FA + L + + + P G A P C + + + + +
Sbjct: 260 IFA--SLGNLTFLSLQWNMLRV-----LPAGLFAHTP-----CLVGLSLTHNQLETVAEG 307
Query: 119 PILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLT 178
L L N IT LP F + + L ++ L N ++ + FQ L L L+
Sbjct: 308 TFAHLSNLRSLMLSYNAITHLPAGIFRDLEELVKLYLGSNNLTALHPALFQNLSKLELLS 367
Query: 179 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPR--LGLYTKCFAP 236
L+ N LT LP+G+F + L L + N + CDCHL++L WL++Y L + T C P
Sbjct: 368 LSKNQLTTLPEGIFDTNYNLFNLALHGNPWQCDCHLAYLFNWLQQYTDRLLNIQTYCAGP 427
Query: 237 SHIKGQNILDIPEHEFKC 254
+++KGQ + + E + C
Sbjct: 428 AYLKGQVVPALNEKQLVC 445
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 88/211 (41%), Gaps = 42/211 (19%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAP- 62
TLN N L LP+G+F L L +L + N L+ PR + F P
Sbjct: 127 TLNFNMLEALPEGLFQHLAALESLHLQGNQ-------------LQALPR-----RLFQPL 168
Query: 63 SHIK----GQNIL-DIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 117
+H+K QN+L +PE F ++ A P G +
Sbjct: 169 THLKTLNLAQNLLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKLGSLQ-------- 220
Query: 118 VPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSL 177
EL L+ N+I+ELPP+ F+ L R+ L +N I+ + + F L +LT L
Sbjct: 221 ----------ELFLDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLSIFASLGNLTFL 270
Query: 178 TLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+L N L LP G+FA L L ++ N
Sbjct: 271 SLQWNMLRVLPAGLFAHTPCLVGLSLTHNQL 301
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 132/361 (36%), Gaps = 75/361 (20%)
Query: 93 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRR 152
A+P CP C C V C ++ L VP+ +P T + + T L +AF + L +
Sbjct: 19 AQP-CPMGCDCFVQEVFCSDEELATVPLDIPPYTKNIIFVETSFTTLETRAFGSNPNLTK 77
Query: 153 IDLSKNQISKVAVDAFQGL------------------------KSLTSLTLNNNNLTYLP 188
+ Q+ + DAF GL SL LTLN N L LP
Sbjct: 78 VVFLNTQLCQFRPDAFGGLPRLEDLEVTGSSFLNLSTNIFSNLTSLGKLTLNFNMLEALP 137
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAP-SHIK----GQN 243
+G+F L L +L + N L+ PR + F P +H+K QN
Sbjct: 138 EGLFQHLAALESLHLQGNQ-------------LQALPR-----RLFQPLTHLKTLNLAQN 179
Query: 244 IL-DIPEHEFK--CSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAE--PSCPHP 298
+L +PE F S +++ + F S +E P
Sbjct: 180 LLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQ 239
Query: 299 CRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL------------------ 340
C + + + + +P+ + + LT++ + +VL
Sbjct: 240 LFCLERLW-LQRNAITHLPLSIFASLGNLTFLSLQWNMLRVLPAGLFAHTPCLVGLSLTH 298
Query: 341 --LYSYISNNFKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFA 397
L + F +N RS L N IT LP F + + L ++ L N++T L P F
Sbjct: 299 NQLETVAEGTFAHLSNLRSLMLSYNAITHLPAGIFRDLEELVKLYLGSNNLTALHPALFQ 358
Query: 398 N 398
N
Sbjct: 359 N 359
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 359 LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
L+ N+I+ELPP+ F+ L R+ L++N IT LP FA+ L
Sbjct: 224 LDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLSIFASLGNL 267
>gi|119928635|dbj|BAF43140.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 170
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C + L VP +P T L L N IT+L P F + L+ + L
Sbjct: 11 ACPARCSCSGTQVNCDRRSLASVPAGIPTTTQTLFLRFNQITKLEPGVFDHLANLQHLYL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
NQ++ V F L++L L LN+N L +P+GVFA L L + + N + C C +
Sbjct: 71 GDNQLTTVPAGVFDRLRNLQRLGLNDNQLKSVPNGVFARLLSLTHVWLHTNPWDCQCTDI 130
Query: 215 SWLHRWLKRY 224
+L W ++
Sbjct: 131 LYLSGWAAQH 140
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKV--LLYSYISNNFKR 351
+CP C C+ V+C + L VP +P TT T + +++ K+ ++ +++N
Sbjct: 11 ACPARCSCSGTQVNCDRRSLASVPAGIP--TTTQTLFLRFNQITKLEPGVFDHLAN---- 64
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L N +T +P F + L+R+ L N + +P FA L +
Sbjct: 65 --LQHLYLGDNQLTTVPAGVFDRLRNLQRLGLNDNQLKSVPNGVFARLLSLTHV 116
>gi|145207279|gb|AAH31569.2| Carboxypeptidase N, polypeptide 2 [Homo sapiens]
gi|187951677|gb|AAI37399.1| Carboxypeptidase N, polypeptide 2 [Homo sapiens]
gi|187953553|gb|AAI37404.1| Carboxypeptidase N, polypeptide 2 [Homo sapiens]
Length = 545
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 114/258 (44%), Gaps = 20/258 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFI-----CDCHLSWLHR-WLKRYPRLGLYTK 58
L+NN L+ LP GVF +L L+ L + N+ L L R WL+R L
Sbjct: 200 LSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLS 259
Query: 59 CFAPSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKV 118
FA + L + + + P G A P C + + + + +
Sbjct: 260 IFA--SLGNLTFLSLQWNMLRV-----LPAGLFAHTP-----CLVGLSLTHNQLETVAEG 307
Query: 119 PILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLT 178
L L N IT LP F + + L ++ L N ++ + FQ L L L+
Sbjct: 308 TFAHLSNLRSLMLSYNAITHLPAGIFRDLEELVKLYLGSNNLTALHPALFQNLSKLELLS 367
Query: 179 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPR--LGLYTKCFAP 236
L+ N LT LP+G+F + L L + N + CDCHL++L WL++Y L + T C P
Sbjct: 368 LSKNQLTTLPEGIFDTNYNLFNLALHGNPWQCDCHLAYLFNWLQQYTDRLLNIQTYCAGP 427
Query: 237 SHIKGQNILDIPEHEFKC 254
+++KGQ + + E + C
Sbjct: 428 AYLKGQVVPALNEKQLVC 445
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 88/211 (41%), Gaps = 42/211 (19%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAP- 62
TLN N L LP+G+F L L +L + N L+ PR + F P
Sbjct: 127 TLNFNMLEALPEGLFQHLAALESLHLQGNQ-------------LQALPR-----RLFQPL 168
Query: 63 SHIK----GQNIL-DIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 117
+H+K QN+L +PE F ++ A P G +
Sbjct: 169 THLKTLNLAQNLLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKLGSLQ-------- 220
Query: 118 VPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSL 177
EL L+ N+I+ELPP+ F+ L R+ L +N I+ + + F L +LT L
Sbjct: 221 ----------ELFLDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLSIFASLGNLTFL 270
Query: 178 TLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+L N L LP G+FA L L ++ N
Sbjct: 271 SLQWNMLRVLPAGLFAHTPCLVGLSLTHNQL 301
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 132/361 (36%), Gaps = 75/361 (20%)
Query: 93 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRR 152
A+P CP C C V C ++ L VP+ +P T + + T L +AF + L +
Sbjct: 19 AQP-CPMGCDCFVQEVFCSDEELATVPLDIPPYTKNIIFVETSFTTLETRAFGSNPNLTK 77
Query: 153 IDLSKNQISKVAVDAFQGL------------------------KSLTSLTLNNNNLTYLP 188
+ Q+ + DAF GL SL LTLN N L LP
Sbjct: 78 VVFLNTQLCQFRPDAFGGLPRLEDLEVTGSSFLNLSTNIFSNLTSLGKLTLNFNMLEALP 137
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAP-SHIK----GQN 243
+G+F L L +L + N L+ PR + F P +H+K QN
Sbjct: 138 EGLFQHLAALESLHLQGNQ-------------LQALPR-----RLFQPLTHLKTLNLAQN 179
Query: 244 IL-DIPEHEFK--CSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAE--PSCPHP 298
+L +PE F S +++ + F S +E P
Sbjct: 180 LLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQ 239
Query: 299 CRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL------------------ 340
C + + + + +P+ + + LT++ + +VL
Sbjct: 240 LFCLERLW-LQRNAITHLPLSIFASLGNLTFLSLQWNMLRVLPAGLFAHTPCLVGLSLTH 298
Query: 341 --LYSYISNNFKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFA 397
L + F +N RS L N IT LP F + + L ++ L N++T L P F
Sbjct: 299 NQLETVAEGTFAHLSNLRSLMLSYNAITHLPAGIFRDLEELVKLYLGSNNLTALHPALFQ 358
Query: 398 N 398
N
Sbjct: 359 N 359
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 359 LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
L+ N+I+ELPP+ F+ L R+ L++N IT LP FA+ L
Sbjct: 224 LDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLSIFASLGNL 267
>gi|284010950|dbj|BAI66950.1| variable lymphocyte receptor B [Eptatretus burgeri]
Length = 258
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 59/113 (52%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C KGL VP +P +TT+L L N + LP F L+ + L
Sbjct: 23 ACPSRCSCSGTTVNCWNKGLTSVPSGIPSSTTQLYLGGNKLQSLPSGVFDKLTELKELRL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
NQ+ + F L LT L+L+ N L LP+GVF +L L L ++EN
Sbjct: 83 YNNQLQSLPNGVFDKLTQLTQLSLSQNQLQSLPNGVFDKLTSLTHLALNENQL 135
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C KGL VP +P +TT+L + L S S F + T
Sbjct: 23 ACPSRCSCSGTTVNCWNKGLTSVPSGIPSSTTQL-------YLGGNKLQSLPSGVFDKLT 75
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ RL N + LP F +L ++ L QN + LP F L +
Sbjct: 76 ELKELRLYNNQLQSLPNGVFDKLTQLTQLSLSQNQLQSLPNGVFDKLTSLTHL 128
>gi|119928553|dbj|BAF43102.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 168
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 67/129 (51%), Gaps = 1/129 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC+ + L VP +P +T ELRL N IT+L P F + +L + L
Sbjct: 11 ACPAQCSCSGTTVDCQSRSLASVPAGIPTSTRELRLYTNQITKLEPGVFDSLMQLTELSL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
S NQ++ + F L +L L LN N L +P G F L L + + N + C C +
Sbjct: 71 SYNQLTALPEGVFDRLVNLHRLYLNQNQLKSIPRGAFDNLKSLTHIWLFNNPWDCACTDI 130
Query: 215 SWLHRWLKR 223
+L W+ +
Sbjct: 131 LYLSTWIGQ 139
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTEL-TYMVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ VDC+ + L VP +P +T EL Y I +++ + S + +
Sbjct: 11 ACPAQCSCSGTTVDCQSRSLASVPAGIPTSTRELRLYTNQITKLEPGVFDSLM-----QL 65
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
T S L N +T LP F L R+ L QN + +P AF N K L +
Sbjct: 66 TELS--LSYNQLTALPEGVFDRLVNLHRLYLNQNQLKSIPRGAFDNLKSLTHI 116
>gi|47077716|dbj|BAD18737.1| unnamed protein product [Homo sapiens]
Length = 653
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 2/131 (1%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL + N E+ P +F L+++ + +Q+S + +AF GL SL L L +NNL+ L
Sbjct: 222 ELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSL 281
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAPSHIKGQNIL 245
P +F L L L + + + CDC + WL W + Y +C AP H++G+ ++
Sbjct: 282 PHDLFTPLRYLVELHLHHDPWNCDCDILWLAWWFREYIPTNSTCCGRCHAPMHMRGRYLV 341
Query: 246 DIPEHEFKCSG 256
++ + F+CS
Sbjct: 342 EVDQASFQCSA 352
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 96 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRI 153
+CP C C++ V C +GL++VP +P T L L +N+I + F + L +
Sbjct: 45 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVL 104
Query: 154 DLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
L +N I ++ V AF GL SL +L L +N LT +P G F L +LR L + N
Sbjct: 105 QLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNN 157
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 12/127 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAP 62
L +NNL+ LP +F L L L + + + CDC + WL W + Y +C AP
Sbjct: 273 LAHNNLSSLPHDLFTPLRYLVELHLHHDPWNCDCDILWLAWWFREYIPTNSTCCGRCHAP 332
Query: 63 SHIKGQNILDIPEHEFKCSGP--VEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
H++G+ ++++ + F+CS P ++ P +E R A+ + CR ++ V
Sbjct: 333 MHMRGRYLVEVDQASFQCSAPFIMDAPRDLNISE------GRMAE--LKCRTPPMSSVKW 384
Query: 121 LLPEATT 127
LLP T
Sbjct: 385 LLPNGTV 391
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 294 SCPHPCRCADGI--VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKR 351
+CP C C++ V C +GL++VP +P T L M + ++ + + ++ +
Sbjct: 45 NCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHH---- 100
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+L +N I ++ AF L + L N +T +P AF +LR +
Sbjct: 101 --LEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLREL 152
>gi|441619527|ref|XP_004088592.1| PREDICTED: relaxin receptor 1 [Nomascus leucogenys]
Length = 746
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 65/111 (58%), Gaps = 1/111 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
S P C C +DC E L VP + T + L+ N I +LPP F NY L+++ L
Sbjct: 88 SVPVQCLCRGLELDCDETNLRAVPSV-SSNVTAMSLQWNLIRKLPPDCFKNYHDLQKLYL 146
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
N+I+ +++ AF+GL SLT L L++N +T+L GVF +L RL L I +N
Sbjct: 147 QNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDN 197
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 81/202 (40%), Gaps = 35/202 (17%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N +T+L GVF +L RL L I +N HLS + +P
Sbjct: 170 LSHNRITFLKPGVFEDLHRLEWLIIEDN------HLSRI-----------------SPPT 206
Query: 65 IKGQN--ILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCRE-KGLNKVPIL 121
G N IL + + P +P C H R ++ L + +
Sbjct: 207 FYGLNSLILLVLMNNVLTRLP---------DKPLCQHMPRLHWLDLEGNHIHNLRNLTFI 257
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
T L + +N I L FA ++L +DL N+I + F+ LK L+ L L+
Sbjct: 258 SCSNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSY 317
Query: 182 NNLTYLPDGVFAELFRLRTLRI 203
N + + F L +L++L +
Sbjct: 318 NPIQKIQANQFDYLVKLKSLSL 339
>gi|76161789|gb|ABA39991.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 171
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 66/133 (49%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C E+ L VP +P T L L N IT+L P F + L + L
Sbjct: 1 ACPSQCSCSGTQVNCHERSLASVPAGIPTTTQVLYLYTNQITKLEPGVFDSLTALTYLTL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ++ + V F L LT L L+ N L +P G F L L + + N + C C +
Sbjct: 61 RNNQLTALPVGVFDKLPKLTHLVLHTNQLKSIPRGAFDNLKSLTHIFLYNNPWDCACSDI 120
Query: 215 SWLHRWLKRYPRL 227
+L RW+ + P +
Sbjct: 121 LYLSRWISQNPGV 133
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS--IDRVDKVLLYSYISNNFKR 351
+CP C C+ V+C E+ L VP +P TT++ Y+ + I +++ + S + +
Sbjct: 1 ACPSQCSCSGTQVNCHERSLASVPAGIP-TTTQVLYLYTNQITKLEPGVFDSLTALTY-- 57
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N +T LP F +L + L N + +P AF N K L +
Sbjct: 58 -----LTLRNNQLTALPVGVFDKLPKLTHLVLHTNQLKSIPRGAFDNLKSLTHI 106
>gi|126331935|ref|XP_001368138.1| PREDICTED: probable G-protein coupled receptor 125 [Monodelphis
domestica]
Length = 1333
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 64/126 (50%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N I+ + P AF L+R+DL+ N+I + + F+GL +L L L+ N + L
Sbjct: 122 LDLRNNLISTIDPGAFWGLSSLKRLDLTNNRIGCLNANIFRGLTNLVRLNLSGNLFSSLA 181
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
G F L LR+L +CDC++ W+HRW+K T+C P ++ Q + +
Sbjct: 182 QGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKERNITVRETRCAYPKSLQAQPVTGVK 241
Query: 249 EHEFKC 254
+ C
Sbjct: 242 QELLTC 247
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N + L G F L LR+L +CDC++ W+HRW+K T+C P
Sbjct: 172 LSGNLFSSLAQGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKERNITVRETRCAYPKS 231
Query: 65 IKGQNILDIPEHEFKCSGPVEKPT 88
++ Q + + + C P+E P+
Sbjct: 232 LQAQPVTGVKQELLTCDPPLELPS 255
>gi|50086829|gb|AAT70295.1| variable lymphocyte receptor [Petromyzon marinus]
Length = 190
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 60/113 (53%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C K L VP +P T L L N IT+L P F +L R+DL
Sbjct: 9 ACPSQCSCSGTEVNCAGKSLASVPAGIPTTTRVLYLNSNQITKLEPGVFDRLTQLTRLDL 68
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
NQ++ + F L +L +L L+ N LT LP GVF +L +L L +S N
Sbjct: 69 DNNQLTVLPAGVFDSLVNLQTLYLHQNELTTLPAGVFDKLTQLTRLALSTNQL 121
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C K L VP +P TT + Y+ S +++ K+ F R T
Sbjct: 9 ACPSQCSCSGTEVNCAGKSLASVPAGIP-TTTRVLYLNS-NQITKLE-----PGVFDRLT 61
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+R L+ N +T LP F + L+ + L QN++T LP F +L R+
Sbjct: 62 QLTRLDLDNNQLTVLPAGVFDSLVNLQTLYLHQNELTTLPAGVFDKLTQLTRL 114
>gi|355747166|gb|EHH51780.1| hypothetical protein EGM_11223 [Macaca fascicularis]
Length = 545
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 126/286 (44%), Gaps = 46/286 (16%)
Query: 3 RTLN--NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCF 60
+TLN N L LP+ +F L L+TL++S N+ LS L + + + RLG + F
Sbjct: 172 KTLNLAQNLLAQLPEELFHPLTSLQTLKLSNNA------LSGLPQGV--FARLGSLQELF 223
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADG---IVDCREKGLNK 117
S+ I ++P F +E+ + A P + G + + L
Sbjct: 224 LDSN----KISELPPRVFSQLFRLERLWLQHNAITHLPLSIFASLGNLTFLSLQGNMLRV 279
Query: 118 VPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSL 174
+P L T L L N + L AFA+ LR + LS N I+ + F+ L+ L
Sbjct: 280 LPAGLFAHTPHLVGLSLTHNQLETLAEGAFAHLSNLRSLMLSYNAIAHLPAGIFRDLEEL 339
Query: 175 TSLTLNNNNLTYL------------------------PDGVFAELFRLRTLRISENSFIC 210
L L++NNLT L P+G+F + L L + N + C
Sbjct: 340 VKLYLSSNNLTALHPALFQNLSKLELLSLSKNQLTTLPEGIFDTNYNLFNLALHGNPWQC 399
Query: 211 DCHLSWLHRWLKRYPR--LGLYTKCFAPSHIKGQNILDIPEHEFKC 254
DCHL++L WL++Y L + T C P+++KGQ + + E + C
Sbjct: 400 DCHLAYLFNWLQQYTDRLLNIQTYCAGPAYLKGQVVPALNEKQLVC 445
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 87/211 (41%), Gaps = 42/211 (19%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAP- 62
TLN N L L +G+F ++ L +L + N L+ PR + F P
Sbjct: 127 TLNFNMLEALLEGLFQDMAALESLHLQGNR-------------LQALPR-----RLFQPL 168
Query: 63 SHIK----GQNIL-DIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 117
+H+K QN+L +PE F ++ A P G
Sbjct: 169 THLKTLNLAQNLLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFARLG----------- 217
Query: 118 VPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSL 177
+ EL L+ N I+ELPP+ F+ RL R+ L N I+ + + F L +LT L
Sbjct: 218 -------SLQELFLDSNKISELPPRVFSQLFRLERLWLQHNAITHLPLSIFASLGNLTFL 270
Query: 178 TLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+L N L LP G+FA L L ++ N
Sbjct: 271 SLQGNMLRVLPAGLFAHTPHLVGLSLTHNQL 301
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 120/316 (37%), Gaps = 19/316 (6%)
Query: 93 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRR 152
A+P CP C C V C ++ L +P +P TT + + T + +AF + L +
Sbjct: 19 AQP-CPVGCDCFVREVFCSDEELAAIPPDIPPHTTNIVFVETLFTTVETRAFGSNPNLTK 77
Query: 153 IDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC 212
+ Q+ + DAF GL L L + ++ L F+ L L L ++ N + +
Sbjct: 78 VVFLNTQLCQFRPDAFGGLPRLEDLEITGSSFLNLSANTFSNLTSLGKLTLNFN--MLEA 135
Query: 213 HLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFK--CSGSSMETRSKIYREEC 270
L L + + L H++G + +P F+ ++ + +
Sbjct: 136 LLEGLFQDMAALESL----------HLQGNRLQALPRRLFQPLTHLKTLNLAQNLLAQLP 185
Query: 271 STDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYM 330
FHP S K + A P G + NK+ L P ++L +
Sbjct: 186 EELFHPLTSLQTLKLSNN--ALSGLPQGVFARLGSLQELFLDSNKISELPPRVFSQLFRL 243
Query: 331 VSIDRVDKVLLYSYISNNFKRWTNRS-RRLEQNDITELPPKAFANYKRLRRIRLEQNDIT 389
+ + + +S F N + L+ N + LP FA+ L + L N +
Sbjct: 244 ERLWLQHNAITHLPLS-IFASLGNLTFLSLQGNMLRVLPAGLFAHTPHLVGLSLTHNQLE 302
Query: 390 ELPPKAFANYKRLRRM 405
L AFA+ LR +
Sbjct: 303 TLAEGAFAHLSNLRSL 318
>gi|297287190|ref|XP_001095878.2| PREDICTED: hypothetical protein LOC707574 [Macaca mulatta]
Length = 1348
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 126/286 (44%), Gaps = 46/286 (16%)
Query: 3 RTLN--NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCF 60
+TLN N L LP+ +F L L+TL++S N+ LS L + + + RLG + F
Sbjct: 975 KTLNLAQNLLAQLPEELFHPLTSLQTLKLSNNA------LSGLPQGV--FARLGSLQELF 1026
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADG---IVDCREKGLNK 117
S+ I ++P F +E+ + A P + G + + L
Sbjct: 1027 LDSN----KISELPPRVFSQLFRLERLWLQHNAITHLPLSIFASLGNLTFLSLQGNMLRV 1082
Query: 118 VPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSL 174
+P L T L L N + L AFA+ LR + LS N I+ + F+ L+ L
Sbjct: 1083 LPAGLFAHTPHLVGLSLTHNQLETLAEGAFAHLSNLRSLMLSYNAIAHLPAGIFRDLEEL 1142
Query: 175 TSLTLNNNNLTYL------------------------PDGVFAELFRLRTLRISENSFIC 210
L L++NNLT L P+G+F + L L + N + C
Sbjct: 1143 VKLYLSSNNLTALHPALFQNLSKLELLSLSKNQLTTLPEGIFDTNYNLFNLALHGNPWQC 1202
Query: 211 DCHLSWLHRWLKRYPR--LGLYTKCFAPSHIKGQNILDIPEHEFKC 254
DCHL++L WL++Y L + T C P+++KGQ + + E + C
Sbjct: 1203 DCHLAYLFNWLQQYTDRLLNIQTYCAGPAYLKGQVVPALNEKQLVC 1248
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 66/123 (53%), Gaps = 3/123 (2%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL L N + +L F L+ I L N++ ++ + F + L ++ L NN L L
Sbjct: 345 ELSLHTNALQDLDGNVFRMLANLQNISLQNNRLRQLPGNIFANVNGLMTIQLQNNQLENL 404
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRW-LKRYPRLGLYT--KCFAPSHIKGQNI 244
P G+F L +L LR+ +N + CD + L W L PRLG T CF+P++++GQ++
Sbjct: 405 PLGIFDHLGKLCELRLYDNPWRCDSDILPLRNWLLLNQPRLGTDTVPVCFSPANVRGQSL 464
Query: 245 LDI 247
+ I
Sbjct: 465 III 467
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 93/215 (43%), Gaps = 48/215 (22%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N+L Y+PDG F L L L + +NS H+S PR+ +
Sbjct: 156 LHGNHLEYIPDGAFDHLVGLTKLNLGKNSL---THIS---------PRVFQHLGNLQVLR 203
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL--NKVPILL 122
+ + DIP F DG+V+ +E L N++ +L
Sbjct: 204 LYENRLTDIPMGTF--------------------------DGLVNLQELALQQNQIGLLS 237
Query: 123 P------EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
P L L N I++LPP F +L R+ L N + +++ F + +L
Sbjct: 238 PGLFHNNHNLQRLYLSNNHISQLPPSIFMQLPQLNRLTLFGNSLKELSPGIFGPMPNLRE 297
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISEN--SFI 209
L L +N++T LPD VF+ L +L+ L +S N SFI
Sbjct: 298 LWLYDNHITSLPDNVFSNLRQLQVLILSRNQISFI 332
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 87/211 (41%), Gaps = 42/211 (19%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAP- 62
TLN N L L +G+F ++ L +L + N L+ PR + F P
Sbjct: 930 TLNFNMLEALLEGLFQDMAALESLHLQGNR-------------LQALPR-----RLFQPL 971
Query: 63 SHIK----GQNIL-DIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 117
+H+K QN+L +PE F ++ A P G
Sbjct: 972 THLKTLNLAQNLLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFARLG----------- 1020
Query: 118 VPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSL 177
+ EL L+ N I+ELPP+ F+ RL R+ L N I+ + + F L +LT L
Sbjct: 1021 -------SLQELFLDSNKISELPPRVFSQLFRLERLWLQHNAITHLPLSIFASLGNLTFL 1073
Query: 178 TLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+L N L LP G+FA L L ++ N
Sbjct: 1074 SLQGNMLRVLPAGLFAHTPHLVGLSLTHNQL 1104
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Query: 89 GECAAEPSCPHPCRCADGI-VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANY 147
G A CP C C+ V+C + VP LP L++ ITEL F N
Sbjct: 17 GAGLAYYGCPSECTCSRASQVECTGARIVAVPTPLPWNAMSLQILNTHITELSESPFLNI 76
Query: 148 KRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
L + + KN++S + AF+ L SL L+L NN L LP G+F
Sbjct: 77 SALIALRIEKNELSHIMPGAFRNLGSLRYLSLANNKLQVLPIGLF 121
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 24/126 (19%)
Query: 107 IVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVD 166
I++ L++ P L A LR+E+N+++ + P AF N LR + L+ N++ + +
Sbjct: 60 ILNTHITELSESPFLNISALIALRIEKNELSHIMPGAFRNLGSLRYLSLANNKLQVLPIG 119
Query: 167 AFQGL------------------------KSLTSLTLNNNNLTYLPDGVFAELFRLRTLR 202
FQGL +L L L+ N+L Y+PDG F L L L
Sbjct: 120 LFQGLDSLESLLLSSNQLVQIQPAHFSQCSNLKELQLHGNHLEYIPDGAFDHLVGLTKLN 179
Query: 203 ISENSF 208
+ +NS
Sbjct: 180 LGKNSL 185
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 120/316 (37%), Gaps = 19/316 (6%)
Query: 93 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRR 152
A+P CP C C V C ++ L +P +P TT + + T + +AF + L +
Sbjct: 822 AQP-CPMGCDCFVREVFCSDEELAAIPPDIPPHTTNIVFVETSFTTVETRAFGSNPNLTK 880
Query: 153 IDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC 212
+ Q+ + DAF GL L L + ++ L F+ L L L ++ N + +
Sbjct: 881 VVFLNTQLCQFRPDAFGGLPRLEDLEITGSSFLNLSANTFSNLTSLGKLTLNFN--MLEA 938
Query: 213 HLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFK--CSGSSMETRSKIYREEC 270
L L + + L H++G + +P F+ ++ + +
Sbjct: 939 LLEGLFQDMAALESL----------HLQGNRLQALPRRLFQPLTHLKTLNLAQNLLAQLP 988
Query: 271 STDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYM 330
FHP S K + A P G + NK+ L P ++L +
Sbjct: 989 EELFHPLTSLQTLKLSNN--ALSGLPQGVFARLGSLQELFLDSNKISELPPRVFSQLFRL 1046
Query: 331 VSIDRVDKVLLYSYISNNFKRWTNRS-RRLEQNDITELPPKAFANYKRLRRIRLEQNDIT 389
+ + + +S F N + L+ N + LP FA+ L + L N +
Sbjct: 1047 ERLWLQHNAITHLPLS-IFASLGNLTFLSLQGNMLRVLPAGLFAHTPHLVGLSLTHNQLE 1105
Query: 390 ELPPKAFANYKRLRRM 405
L AFA+ LR +
Sbjct: 1106 TLAEGAFAHLSNLRSL 1121
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 1 MPRTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW-LKRYPRLGLYT-- 57
M L NN L LP G+F L +L LR+ +N + CD + L W L PRLG T
Sbjct: 392 MTIQLQNNQLENLPLGIFDHLGKLCELRLYDNPWRCDSDILPLRNWLLLNQPRLGTDTVP 451
Query: 58 KCFAPSHIKGQNILDI 73
CF+P++++GQ+++ I
Sbjct: 452 VCFSPANVRGQSLIII 467
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL+L N + +P AF + L +++L KN ++ ++ FQ L +L L L N LT +
Sbjct: 153 ELQLHGNHLEYIPDGAFDHLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRLTDI 212
Query: 188 PDGVFAELFRLRTLRISENSF 208
P G F L L+ L + +N
Sbjct: 213 PMGTFDGLVNLQELALQQNQI 233
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 359 LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L+QN I L P F N L+R+ L N I++LPP F +L R+
Sbjct: 228 LQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLPPSIFMQLPQLNRL 274
>gi|260787569|ref|XP_002588825.1| hypothetical protein BRAFLDRAFT_89744 [Branchiostoma floridae]
gi|229273995|gb|EEN44836.1| hypothetical protein BRAFLDRAFT_89744 [Branchiostoma floridae]
Length = 1200
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 62/116 (53%), Gaps = 1/116 (0%)
Query: 92 AAEPSCPHPCRCADG-IVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRL 150
A +CP C C V C +GL VP +P TT L L+ N+I +L F RL
Sbjct: 81 TAAFTCPETCSCGSNEQVYCIRRGLTVVPANIPLGTTVLYLDFNNIQDLSDADFGYLTRL 140
Query: 151 RRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
+DLS N I+ + F L SL L L+NNN++ LP GVF+ L LR L +S+N
Sbjct: 141 ELLDLSYNHIADLPDGVFSNLTSLVELLLHNNNISSLPTGVFSHLTSLRYLWLSDN 196
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 96/241 (39%), Gaps = 36/241 (14%)
Query: 7 NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIK 66
N++ LPDGVF+ L LR L + N+ S LGL ++
Sbjct: 267 GNHIADLPDGVFSNLTSLRDLYLHNNNIS-----SLPTGVFSHLTSLGLL-------YLS 314
Query: 67 GQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEAT 126
G +I D+P F + + + ++ +P +
Sbjct: 315 GNHIADLPHGVFSNLTSLLQ---------------------LHLHNNNISSLPTGVFSHL 353
Query: 127 TELRL---EQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
T L L N I +LP F++ L + L N IS + F L L L L+NNN
Sbjct: 354 TSLGLLYLSGNHIADLPDGVFSHLTNLGVLHLENNNISSLPSGVFSRLTRLVRLHLDNNN 413
Query: 184 LTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQN 243
++ LP GVF+ L L+ L I+ N + CDC + L + + C +P H+KG
Sbjct: 414 ISSLPSGVFSHLTSLQNLYIAGNPWRCDCSIHGLLTSARLRTSISDGPTCSSPHHMKGDA 473
Query: 244 I 244
+
Sbjct: 474 L 474
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 99/209 (47%), Gaps = 20/209 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICD------CHLSWLHR-WLKRYPRLGLYT 57
L+NNN++ LP GVF+ L LR L +S+N I D HL+ L + +L++ L T
Sbjct: 169 LHNNNISSLPTGVFSHLTSLRYLWLSDNH-IADLPDGVFSHLTSLEQLFLEKNIISSLPT 227
Query: 58 KCFAPSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 117
F SH+ +L + ++ P+G + S + I D + +
Sbjct: 228 GVF--SHLTRLVVLLMENNDIS-----SLPSGVFSHLTSLFSLSLSGNHIADLPDGVFSN 280
Query: 118 VPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSL 177
+ L +L L N+I+ LP F++ L + LS N I+ + F L SL L
Sbjct: 281 LTSL-----RDLYLHNNNISSLPTGVFSHLTSLGLLYLSGNHIADLPHGVFSNLTSLLQL 335
Query: 178 TLNNNNLTYLPDGVFAELFRLRTLRISEN 206
L+NNN++ LP GVF+ L L L +S N
Sbjct: 336 HLHNNNISSLPTGVFSHLTSLGLLYLSGN 364
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 105/260 (40%), Gaps = 38/260 (14%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L LE+N I+ LP F++ RL + + N IS + F L SL SL+L+ N++ L
Sbjct: 214 QLFLEKNIISSLPTGVFSHLTRLVVLLMENNDISSLPSGVFSHLTSLFSLSLSGNHIADL 273
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDI 247
PDGVF+ L LR L + N+ S LGL ++ G +I D+
Sbjct: 274 PDGVFSNLTSLRDLYLHNNNIS-----SLPTGVFSHLTSLGLL-------YLSGNHIADL 321
Query: 248 PEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVD 307
P F S ++ H +N+ PTG + S + I D
Sbjct: 322 PHGVFSNLTSLLQ-------------LHLHNNNISSLPTGVFSHLTSLGLLYLSGNHIAD 368
Query: 308 CREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDITE 366
LP+ + + ++ + S S F R T R L+ N+I+
Sbjct: 369 ------------LPDGVFSHLTNLGVLHLENNNISSLPSGVFSRLTRLVRLHLDNNNISS 416
Query: 367 LPPKAFANYKRLRRIRLEQN 386
LP F++ L+ + + N
Sbjct: 417 LPSGVFSHLTSLQNLYIAGN 436
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+NNN++ LP GVF+ L L+ L I+ N + CDC + L + + C +P H
Sbjct: 409 LDNNNISSLPSGVFSHLTSLQNLYIAGNPWRCDCSIHGLLTSARLRTSISDGPTCSSPHH 468
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSC 97
+KG + + C G + G +C
Sbjct: 469 MKGDALKATVTVDKVCLGRGDCTMGSADVTCAC 501
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 23/137 (16%)
Query: 290 AAEPSCPHPCRCADG-IVDCREKGLNKVPILLPEATT---------------ELTYMVSI 333
A +CP C C V C +GL VP +P TT + Y+ +
Sbjct: 81 TAAFTCPETCSCGSNEQVYCIRRGLTVVPANIPLGTTVLYLDFNNIQDLSDADFGYLTRL 140
Query: 334 DRVDKVLLYSYISN----NFKRWTNRSRRL-EQNDITELPPKAFANYKRLRRIRLEQNDI 388
+ +D L Y++I++ F T+ L N+I+ LP F++ LR + L N I
Sbjct: 141 ELLD--LSYNHIADLPDGVFSNLTSLVELLLHNNNISSLPTGVFSHLTSLRYLWLSDNHI 198
Query: 389 TELPPKAFANYKRLRRM 405
+LP F++ L ++
Sbjct: 199 ADLPDGVFSHLTSLEQL 215
>gi|119928648|dbj|BAF43146.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 168
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 62/129 (48%), Gaps = 1/129 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C K L VP +P L N IT+L P F L+++ L
Sbjct: 11 ACPAQCSCSGTDVHCNSKSLASVPAGIPTNAKSLNFNYNQITKLEPGVFDRLANLQQLYL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ+S + V F L LT L L+ N L +PDG FA L L + + N + C C +
Sbjct: 71 GGNQLSALPVGVFDKLTQLTHLGLDGNQLKSIPDGAFARLSSLTHVWLHTNPWDCACSDI 130
Query: 215 SWLHRWLKR 223
+L W+ +
Sbjct: 131 LYLSTWIGQ 139
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V C K L VP +P L + + +++ K+ F R
Sbjct: 11 ACPAQCSCSGTDVHCNSKSLASVPAGIPTNAKSLNF--NYNQITKLE-----PGVFDRLA 63
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N + L N ++ LP F +L + L+ N + +P AFA L +
Sbjct: 64 NLQQLYLGGNQLSALPVGVFDKLTQLTHLGLDGNQLKSIPDGAFARLSSLTHV 116
>gi|76162143|gb|ABA40151.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 168
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 14/169 (8%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C E+ L VP +P T L L N IT+L P F L+++ L
Sbjct: 1 ACPSQCSCSGTQVNCHERSLASVPAGIPTTTQVLYLYTNQITKLGPGVFDRLVNLQQLWL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ++ + F L LT L LN+N+L +P G F L L + + N + C+C +
Sbjct: 61 EINQLTSLPAGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIWLFGNPWDCECSDI 120
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L W+ ++ + +++G +D KCSG++ R+
Sbjct: 121 LYLKNWIVQHASI---------VNLEGYGGVD----NVKCSGTNTPVRA 156
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKV--LLYSYISNNFKR 351
+CP C C+ V+C E+ L VP +P TT++ Y+ + +++ K+ ++ + N +
Sbjct: 1 ACPSQCSCSGTQVNCHERSLASVPAGIP-TTTQVLYLYT-NQITKLGPGVFDRLVNLQQL 58
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
W LE N +T LP F +L ++ L N + +P AF N K L +
Sbjct: 59 W------LEINQLTSLPAGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHI 106
>gi|291228204|ref|XP_002734069.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
2-like [Saccoglossus kowalevskii]
Length = 1188
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 4/130 (3%)
Query: 129 LRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLT 185
L + NDI+ E AF + L R+ L+ N+I + AF GL L L L++N LT
Sbjct: 372 LDMNHNDISWTVEDTTGAFLGLEALHRLSLASNKIMSIHKRAFTGLSGLEVLDLSDNMLT 431
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFAPSHIKGQNI 244
+ + F + L+ LRI+ S +CDC L W+ W++ + KC P +KGQ+I
Sbjct: 432 SIEEDSFVNMQNLKELRINSTSLVCDCELKWIRNWIRSNGYENSIDLKCSHPQRLKGQSI 491
Query: 245 LDIPEHEFKC 254
L++ +F C
Sbjct: 492 LNVEGQKFIC 501
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
Query: 78 FKCSGPVEKPTGECAAEPS-CPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDI 136
F SG V P C A+ S CP C C +VDC K L ++P +P T L L+ N I
Sbjct: 12 FVISGVVLCPG--CNAQRSMCPSNCSCLGPLVDCSNKHLTEMPKEIPTWTEFLDLQSNYI 69
Query: 137 TELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELF 196
LP AF LR++DLS N+++ + F+ L L L + N+LT +P+ +L
Sbjct: 70 QSLPHDAFDGLVNLRQLDLSNNELTTINGSIFENLTRLQELKIAFNSLTTIPN-FGGKLI 128
Query: 197 RLRTLRISENSFI 209
L L + N+ I
Sbjct: 129 NLTQLSLHHNNII 141
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 4/117 (3%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFAPS 63
L++N LT + + F + L+ LRI+ S +CDC L W+ W++ + KC P
Sbjct: 425 LSDNMLTSIEEDSFVNMQNLKELRINSTSLVCDCELKWIRNWIRSNGYENSIDLKCSHPQ 484
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+KGQ+IL++ +F C + P + P + D ++ C+ + + P+
Sbjct: 485 RLKGQSILNVEGQKFICE---DIPKPKMIKHPKTTMALKGEDVMLTCKAESSSDSPM 538
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 93/225 (41%), Gaps = 31/225 (13%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+NN LT + +F L RL+ L+I+ NS L P G
Sbjct: 88 LSNNELTTINGSIFENLTRLQELKIAFNS-------------LTTIPNFGGKLINLTQLS 134
Query: 65 IKGQNILDIPEHEFKCSGPVEK--------PTGECAAEPS--CPHPCRCADGIVDCREKG 114
+ NI+DI + + +C + PS H + + + G
Sbjct: 135 LHHNNIIDISGTSLDGLASLRELDLNYNKIEELKCGSFPSRNMLHQLYLNNNKITTLQPG 194
Query: 115 -LNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKS 173
N + L L+L +N I+ L K F + L+ ++LS+N+I + AF+GLK+
Sbjct: 195 CFNNITTL-----EWLKLNKNKISNLD-KVFEPLENLKYLELSRNKIKSIDSLAFKGLKN 248
Query: 174 LTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLH 218
L L L N ++ L DG F L ++ + + N+ SWL+
Sbjct: 249 LHILRLKRNGISELMDGAFYGLDTIQNIHLDNNNLTV-VRKSWLY 292
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 11/132 (8%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL L N I+ + + K L IDLS N ++ + + F+ L++L +L + NN ++ +
Sbjct: 299 ELTLSHNKISSIEADGWDFCKELWEIDLSHNMLNSLETNLFKHLQALKNLYMGNNQISNI 358
Query: 188 PDGVFAELFRLRTLRISENSFICDCH--------LSWLHRW-LKRYPRLGLYTKCFAPSH 238
D F L L +L ++ N L LHR L + ++ + F +
Sbjct: 359 DDEAFMGLSSLESLDMNHNDISWTVEDTTGAFLGLEALHRLSLASNKIMSIHKRAF--TG 416
Query: 239 IKGQNILDIPEH 250
+ G +LD+ ++
Sbjct: 417 LSGLEVLDLSDN 428
Score = 41.2 bits (95), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 45/118 (38%), Gaps = 31/118 (26%)
Query: 289 CAAEPS-CPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISN 347
C A+ S CP C C +VDC K L ++P +P T L
Sbjct: 23 CNAQRSMCPSNCSCLGPLVDCSNKHLTEMPKEIPTWTEFL-------------------- 62
Query: 348 NFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L+ N I LP AF LR++ L N++T + F N RL+ +
Sbjct: 63 ----------DLQSNYIQSLPHDAFDGLVNLRQLDLSNNELTTINGSIFENLTRLQEL 110
>gi|402861968|ref|XP_003895345.1| PREDICTED: carboxypeptidase N subunit 2 [Papio anubis]
Length = 545
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 126/286 (44%), Gaps = 46/286 (16%)
Query: 3 RTLN--NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCF 60
+TLN N L LP+ +F L L+TL++S N+ LS L + + + RLG + F
Sbjct: 172 KTLNLAQNLLAQLPEELFHPLTSLQTLKLSNNA------LSGLPQGV--FGRLGSLQELF 223
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADG---IVDCREKGLNK 117
S+ I ++P F +E+ + A P + G + + L
Sbjct: 224 LDSN----KISELPPRVFSQLFRLERLWLQHNAIAHLPLSIFASLGNLTFLSLQGNMLRV 279
Query: 118 VPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSL 174
+P L T L L N + L AFA+ LR + LS N I+ + F+ L+ L
Sbjct: 280 LPAGLFAHTPHLVGLSLTHNQLETLAEGAFAHLSNLRSLMLSYNAIAHLPAGIFRDLEEL 339
Query: 175 TSLTLNNNNLTYL------------------------PDGVFAELFRLRTLRISENSFIC 210
L L++NNLT L P+G+F + L L + N + C
Sbjct: 340 VKLYLSSNNLTALHPALFQNLSKLELLSLSKNQLTTLPEGIFDTNYNLFNLALHGNPWQC 399
Query: 211 DCHLSWLHRWLKRYPR--LGLYTKCFAPSHIKGQNILDIPEHEFKC 254
DCHL++L WL++Y L + T C P+++KGQ + + E + C
Sbjct: 400 DCHLAYLFNWLQQYTDRLLNIQTYCAGPAYLKGQVVPALNEKQLVC 445
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 120/316 (37%), Gaps = 19/316 (6%)
Query: 93 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRR 152
A+P CP C C V C ++ L +P +P TT + + T + +AF + L +
Sbjct: 19 AQP-CPVGCDCFVREVFCSDEELAAIPPDIPPHTTNIVFVETSFTTVETRAFGSNPNLTK 77
Query: 153 IDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC 212
+ Q+ + DAF GL L L + ++ L F+ L L L ++ N + +
Sbjct: 78 VVFLNTQLCQFRPDAFGGLPRLEDLEITGSSFLNLSANTFSNLTSLGKLTLNFN--MLEA 135
Query: 213 HLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFK--CSGSSMETRSKIYREEC 270
L L + + L H++G + +P F+ ++ + +
Sbjct: 136 LLEGLFQDMAALESL----------HLQGNRLQALPRRLFQPLTHLKTLNLAQNLLAQLP 185
Query: 271 STDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYM 330
FHP S K + A P G + NK+ L P ++L +
Sbjct: 186 EELFHPLTSLQTLKLSNN--ALSGLPQGVFGRLGSLQELFLDSNKISELPPRVFSQLFRL 243
Query: 331 VSIDRVDKVLLYSYISNNFKRWTNRS-RRLEQNDITELPPKAFANYKRLRRIRLEQNDIT 389
+ + + +S F N + L+ N + LP FA+ L + L N +
Sbjct: 244 ERLWLQHNAIAHLPLS-IFASLGNLTFLSLQGNMLRVLPAGLFAHTPHLVGLSLTHNQLE 302
Query: 390 ELPPKAFANYKRLRRM 405
L AFA+ LR +
Sbjct: 303 TLAEGAFAHLSNLRSL 318
>gi|296232277|ref|XP_002761521.1| PREDICTED: leucine-rich repeat-containing protein 3 [Callithrix
jacchus]
Length = 257
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 65/124 (52%), Gaps = 7/124 (5%)
Query: 96 SCPHPCRCADGI----VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
SCP PC+C D + VDC +GL +VP +P T L+L N I+ LP AF + RLR
Sbjct: 32 SCPQPCQCPDHVGSVAVDCSFRGLQEVPQDIPTDTVLLKLHANQISHLPDGAFQHLHRLR 91
Query: 152 RIDLSKNQISKVAVDAFQGLK-SLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFIC 210
+DLS+N I + F GL L L L+ N + +P +L +R+S N C
Sbjct: 92 ELDLSRNAIEAIGPSTFTGLAGGLRLLDLSFNRIQRIPKDALGKLG--AKIRLSHNPLHC 149
Query: 211 DCHL 214
+C L
Sbjct: 150 ECAL 153
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 47/116 (40%), Gaps = 34/116 (29%)
Query: 294 SCPHPCRCADGI----VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNF 349
SCP PC+C D + VDC +GL +VP +P D VLL
Sbjct: 32 SCPQPCQCPDHVGSVAVDCSFRGLQEVPQDIP--------------TDTVLL-------- 69
Query: 350 KRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+L N I+ LP AF + RLR + L +N I + P F R+
Sbjct: 70 --------KLHANQISHLPDGAFQHLHRLRELDLSRNAIEAIGPSTFTGLAGGLRL 117
>gi|355560137|gb|EHH16865.1| hypothetical protein EGK_12232 [Macaca mulatta]
Length = 545
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 126/286 (44%), Gaps = 46/286 (16%)
Query: 3 RTLN--NNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCF 60
+TLN N L LP+ +F L L+TL++S N+ LS L + + + RLG + F
Sbjct: 172 KTLNLAQNLLAQLPEELFHPLTSLQTLKLSNNA------LSGLPQGV--FARLGSLQELF 223
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADG---IVDCREKGLNK 117
S+ I ++P F +E+ + A P + G + + L
Sbjct: 224 LDSN----KISELPPRVFSQLFRLERLWLQHNAITHLPLSIFASLGNLTFLSLQGNMLRV 279
Query: 118 VPILLPEAT---TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSL 174
+P L T L L N + L AFA+ LR + LS N I+ + F+ L+ L
Sbjct: 280 LPAGLFAHTPHLVGLSLTHNQLETLAEGAFAHLSNLRSLMLSYNAIAHLPAGIFRDLEEL 339
Query: 175 TSLTLNNNNLTYL------------------------PDGVFAELFRLRTLRISENSFIC 210
L L++NNLT L P+G+F + L L + N + C
Sbjct: 340 VKLYLSSNNLTALHPALFQNLSKLELLSLSKNQLTTLPEGIFDTNYNLFNLALHGNPWQC 399
Query: 211 DCHLSWLHRWLKRYPR--LGLYTKCFAPSHIKGQNILDIPEHEFKC 254
DCHL++L WL++Y L + T C P+++KGQ + + E + C
Sbjct: 400 DCHLAYLFNWLQQYTDRLLNIQTYCAGPAYLKGQVVPALNEKQLVC 445
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 87/211 (41%), Gaps = 42/211 (19%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAP- 62
TLN N L L +G+F ++ L +L + N L+ PR + F P
Sbjct: 127 TLNFNMLEALLEGLFQDMAALESLHLQGNR-------------LQALPR-----RLFQPL 168
Query: 63 SHIK----GQNIL-DIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 117
+H+K QN+L +PE F ++ A P G
Sbjct: 169 THLKTLNLAQNLLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFARLG----------- 217
Query: 118 VPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSL 177
+ EL L+ N I+ELPP+ F+ RL R+ L N I+ + + F L +LT L
Sbjct: 218 -------SLQELFLDSNKISELPPRVFSQLFRLERLWLQHNAITHLPLSIFASLGNLTFL 270
Query: 178 TLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+L N L LP G+FA L L ++ N
Sbjct: 271 SLQGNMLRVLPAGLFAHTPHLVGLSLTHNQL 301
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 120/316 (37%), Gaps = 19/316 (6%)
Query: 93 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRR 152
A+P CP C C V C ++ L +P +P TT + + T + +AF + L +
Sbjct: 19 AQP-CPVGCDCFVREVFCSDEELAAIPPDIPPHTTNIVFVETSFTTVETRAFGSNPNLTK 77
Query: 153 IDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC 212
+ Q+ + DAF GL L L + ++ L F+ L L L ++ N + +
Sbjct: 78 VVFLNTQLCQFRPDAFGGLPRLEDLEITGSSFLNLSANTFSNLTSLGKLTLNFN--MLEA 135
Query: 213 HLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFK--CSGSSMETRSKIYREEC 270
L L + + L H++G + +P F+ ++ + +
Sbjct: 136 LLEGLFQDMAALESL----------HLQGNRLQALPRRLFQPLTHLKTLNLAQNLLAQLP 185
Query: 271 STDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYM 330
FHP S K + A P G + NK+ L P ++L +
Sbjct: 186 EELFHPLTSLQTLKLSNN--ALSGLPQGVFARLGSLQELFLDSNKISELPPRVFSQLFRL 243
Query: 331 VSIDRVDKVLLYSYISNNFKRWTNRS-RRLEQNDITELPPKAFANYKRLRRIRLEQNDIT 389
+ + + +S F N + L+ N + LP FA+ L + L N +
Sbjct: 244 ERLWLQHNAITHLPLS-IFASLGNLTFLSLQGNMLRVLPAGLFAHTPHLVGLSLTHNQLE 302
Query: 390 ELPPKAFANYKRLRRM 405
L AFA+ LR +
Sbjct: 303 TLAEGAFAHLSNLRSL 318
>gi|196013653|ref|XP_002116687.1| predicted protein [Trichoplax adhaerens]
gi|190580665|gb|EDV20746.1| predicted protein [Trichoplax adhaerens]
Length = 1171
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 73/142 (51%), Gaps = 5/142 (3%)
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL 184
A T + LE + ++ + KAF+N KRL+ +DLS N I + D F K+LTSL L NN L
Sbjct: 104 AVTYINLEGSFLSGIQSKAFSNCKRLKNLDLSGNFIRYLHADTFYNAKALTSLNLTNNLL 163
Query: 185 TYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGL----YTKCFAPSHIK 240
LP F+ L L+ L I N CDC L WL W+K R+ L KC P I+
Sbjct: 164 ETLPLQTFSRLDSLKFLNIDSNPLTCDCRLRWLMAWVKS-TRINLSLSQSAKCSQPYSIQ 222
Query: 241 GQNILDIPEHEFKCSGSSMETR 262
+ + + C +M+++
Sbjct: 223 DRMFSSLTWKDLACGPPAMKSK 244
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGL----YTKCF 60
L NN L LP F+ L L+ L I N CDC L WL W+K R+ L KC
Sbjct: 158 LTNNLLETLPLQTFSRLDSLKFLNIDSNPLTCDCRLRWLMAWVKS-TRINLSLSQSAKCS 216
Query: 61 APSHIKGQNILDIPEHEFKCSGPVEK 86
P I+ + + + C P K
Sbjct: 217 QPYSIQDRMFSSLTWKDLACGPPAMK 242
>gi|119598461|gb|EAW78055.1| hCG2040284 [Homo sapiens]
Length = 564
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 114/258 (44%), Gaps = 20/258 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFI-----CDCHLSWLHR-WLKRYPRLGLYTK 58
L+NN L+ LP GVF +L L+ L + N+ L L R WL+R L
Sbjct: 219 LSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLS 278
Query: 59 CFAPSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKV 118
FA + L + + + P G A P C + + + + +
Sbjct: 279 IFA--SLGNLTFLSLQWNMLRV-----LPAGLFAHTP-----CLVGLSLTHNQLETVAEG 326
Query: 119 PILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLT 178
L L N IT LP F + + L ++ L N ++ + FQ L L L+
Sbjct: 327 TFAHLSNLRSLMLSYNAITHLPAGIFRDLEELVKLYLGSNNLTALHPALFQNLSKLELLS 386
Query: 179 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPR--LGLYTKCFAP 236
L+ N LT LP+G+F + L L + N + CDCHL++L WL++Y L + T C P
Sbjct: 387 LSKNQLTTLPEGIFDTNYNLFNLALHGNPWQCDCHLAYLFNWLQQYTDRLLNIQTYCAGP 446
Query: 237 SHIKGQNILDIPEHEFKC 254
+++KGQ + + E + C
Sbjct: 447 AYLKGQVVPALNEKQLVC 464
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 88/211 (41%), Gaps = 42/211 (19%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAP- 62
TLN N L LP+G+F L L +L + N L+ PR + F P
Sbjct: 146 TLNFNMLEALPEGLFQHLAALESLHLQGNQ-------------LQALPR-----RLFQPL 187
Query: 63 SHIK----GQNIL-DIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 117
+H+K QN+L +PE F ++ A P G +
Sbjct: 188 THLKTLNLAQNLLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKLGSLQ-------- 239
Query: 118 VPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSL 177
EL L+ N+I+ELPP+ F+ L R+ L +N I+ + + F L +LT L
Sbjct: 240 ----------ELFLDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLSIFASLGNLTFL 289
Query: 178 TLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+L N L LP G+FA L L ++ N
Sbjct: 290 SLQWNMLRVLPAGLFAHTPCLVGLSLTHNQL 320
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 132/361 (36%), Gaps = 75/361 (20%)
Query: 93 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRR 152
A+P CP C C V C ++ L VP+ +P T + + T L +AF + L +
Sbjct: 38 AQP-CPMGCDCFVQEVFCSDEELATVPLDIPPYTKNIIFVETSFTTLETRAFGSNPNLTK 96
Query: 153 IDLSKNQISKVAVDAFQGL------------------------KSLTSLTLNNNNLTYLP 188
+ Q+ + DAF GL SL LTLN N L LP
Sbjct: 97 VVFLNTQLCQFRPDAFGGLPRLEDLEVTGSSFLNLSTNIFSNLTSLGKLTLNFNMLEALP 156
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAP-SHIK----GQN 243
+G+F L L +L + N L+ PR + F P +H+K QN
Sbjct: 157 EGLFQHLAALESLHLQGNQ-------------LQALPR-----RLFQPLTHLKTLNLAQN 198
Query: 244 IL-DIPEHEFK--CSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAE--PSCPHP 298
+L +PE F S +++ + F S +E P
Sbjct: 199 LLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQ 258
Query: 299 CRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVL------------------ 340
C + + + + +P+ + + LT++ + +VL
Sbjct: 259 LFCLERLW-LQRNAITHLPLSIFASLGNLTFLSLQWNMLRVLPAGLFAHTPCLVGLSLTH 317
Query: 341 --LYSYISNNFKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFA 397
L + F +N RS L N IT LP F + + L ++ L N++T L P F
Sbjct: 318 NQLETVAEGTFAHLSNLRSLMLSYNAITHLPAGIFRDLEELVKLYLGSNNLTALHPALFQ 377
Query: 398 N 398
N
Sbjct: 378 N 378
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 359 LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
L+ N+I+ELPP+ F+ L R+ L++N IT LP FA+ L
Sbjct: 243 LDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLSIFASLGNL 286
>gi|432103981|gb|ELK30814.1| Leucine-rich repeat and immunoglobulin-like domains protein 2,
partial [Myotis davidii]
Length = 975
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 71/130 (54%), Gaps = 5/130 (3%)
Query: 129 LRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLT 185
L L N+I+ E +AFA L ++ L NQI + AF GL+SL L LNNN +
Sbjct: 284 LNLRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSITKKAFIGLESLEHLDLNNNAIM 343
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAPSHIKGQNI 244
+ + F++ RL+ L ++ NS +CDCHL WL +WL + + C P + GQ+I
Sbjct: 344 SIQENAFSQT-RLKELILNTNSLLCDCHLKWLLQWLVDNNFQHSVNATCAHPEWLAGQSI 402
Query: 245 LDIPEHEFKC 254
L++ +F C
Sbjct: 403 LNVDLKDFVC 412
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L + QN + + P A+ +RL +DLS NQ++++ AF GL L L L +N +T++
Sbjct: 211 QLYVNQNAVERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHI 270
Query: 188 PDGVFAELFRLRTLRISEN 206
DGVF L L+TL + N
Sbjct: 271 ADGVFRFLSNLQTLNLRNN 289
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAPS 63
LNNN + + + F++ RL+ L ++ NS +CDCHL WL +WL + + C P
Sbjct: 337 LNNNAIMSIQENAFSQT-RLKELILNTNSLLCDCHLKWLLQWLVDNNFQHSVNATCAHPE 395
Query: 64 HIKGQNILDIPEHEFKC 80
+ GQ+IL++ +F C
Sbjct: 396 WLAGQSILNVDLKDFVC 412
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
++L +N I+ +PPK F L+ ++L +N+I V FQGL SL SL + N ++ L
Sbjct: 117 VKLNRNRISMIPPKIF-KLPHLQFLELKRNRIKVVEGLTFQGLDSLKSLKMQRNGISKLK 175
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLH 218
DG F L + L + N+ + + + WL+
Sbjct: 176 DGAFFGLDNMEELELEHNN-LTEVNKGWLY 204
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L++N I + F L+ + + +N ISK+ AF GL ++ L L +NNLT +
Sbjct: 140 LELKRNRIKVVEGLTFQGLDSLKSLKMQRNGISKLKDGAFFGLDNMEELELEHNNLTEVN 199
Query: 189 DGVFAELFRLRTLRISENS 207
G L L+ L +++N+
Sbjct: 200 KGWLYGLRMLQQLYVNQNA 218
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 127 TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTY 186
T L L N I E+ + F Y L +DLS N IS++ +F ++ L L L+NN +T
Sbjct: 43 TALSLVHNIIAEINAEEFQFYPALESLDLSSNVISEIKTASFPRMQ-LKYLNLSNNRITI 101
Query: 187 LPDGVFAEL 195
L G F L
Sbjct: 102 LEAGCFDNL 110
>gi|426256572|ref|XP_004023436.1| PREDICTED: LOW QUALITY PROTEIN: G-protein coupled receptor 124
[Ovis aries]
Length = 1127
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 93/220 (42%), Gaps = 31/220 (14%)
Query: 63 SHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILL 122
S +G +P KCSG E+P G P+ P R A G D E P LL
Sbjct: 18 SPTRGAPGCPVPIRSCKCSG--ERPKGLSGGAPN-PARRRVACGGGDLPEP---PDPGLL 71
Query: 123 PEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVD--AFQGLKSLTSLTLN 180
P +T L L N IT L +AF L ++DL N I++ V AF GL L L L+
Sbjct: 72 PNSTVTLLLSNNKITGLRSRAFLGLSLLEKLDLRNNIIARSTVQPGAFLGLGELKRLDLS 131
Query: 181 NNNL----------------------TYLPDGVFAELFRLRTLRISENSFICDCHLSWLH 218
NN + + L GVF EL L+ + CDC LSWL
Sbjct: 132 NNRIGCLTSGTFQXRLLGLNISGNIFSSLQPGVFDELPALKVVDFGTEFLTCDCRLSWLL 191
Query: 219 RWLK-RYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGS 257
W + R +L T C PS + Q + + E + +C G+
Sbjct: 192 PWARNRSLQLSERTLCAYPSALHAQALAGLQEAQLRCEGA 231
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTKCFAPS 63
++ N + L GVF EL L+ + CDC LSWL W + R +L T C PS
Sbjct: 152 ISGNIFSSLQPGVFDELPALKVVDFGTEFLTCDCRLSWLLPWARNRSLQLSERTLCAYPS 211
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ Q + + E + +C G +E
Sbjct: 212 ALHAQALAGLQEAQLRCEGALE 233
>gi|76161739|gb|ABA39966.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 163
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDCR K VP +P T L L N IT+L P F L+++ L
Sbjct: 1 ACPSQCSCSGTTVDCRSKRHASVPAGIPTTTRVLHLNSNQITKLEPGVFDRLVNLQKLYL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
+NQ+S + F L + SL+LNNN L +P G F L L + + N + C C +
Sbjct: 61 GENQLSALPAGLFDELTQVYSLSLNNNQLKSIPRGAFDNLKSLTHIYLYNNPWDCACSDI 120
Query: 215 SWLHRW 220
+L W
Sbjct: 121 LYLSHW 126
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ VDCR K VP +P TT ++ +++ K+ F R
Sbjct: 1 ACPSQCSCSGTTVDCRSKRHASVPAGIP--TTTRVLHLNSNQITKLE-----PGVFDRLV 53
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N + L +N ++ LP F ++ + L N + +P AF N K L +
Sbjct: 54 NLQKLYLGENQLSALPAGLFDELTQVYSLSLNNNQLKSIPRGAFDNLKSLTHI 106
>gi|405960875|gb|EKC26749.1| hypothetical protein CGI_10028288 [Crassostrea gigas]
Length = 1629
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L L N IT + AF K L ++DLS N+I + F+GL L L +NN + +
Sbjct: 46 KLDLSHNKITIIKKGAFFGLKELVKLDLSNNKIGSITSSMFEGLTKLEKLNFSNNRINTI 105
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTKCFAPSHIKGQNILD 246
PDG F L L+ + CDCHL W+ +W + + ++ T C P +KG +
Sbjct: 106 PDGTFNNLHALKKIDFQSEYLRCDCHLQWIVKWSRDKNVKIQQSTTCGVPKDLKGVPLKG 165
Query: 247 IPEHEFKC 254
+ + + C
Sbjct: 166 LKKKDLHC 173
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTKCFAPS 63
+NN + +PDG F L L+ + CDCHL W+ +W + + ++ T C P
Sbjct: 97 FSNNRINTIPDGTFNNLHALKKIDFQSEYLRCDCHLQWIVKWSRDKNVKIQQSTTCGVPK 156
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGE 90
+KG + + + + C P+E P E
Sbjct: 157 DLKGVPLKGLKKKDLHCDRPLELPEFE 183
>gi|119928627|dbj|BAF43136.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 169
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 64/133 (48%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C K L VP +P L N IT+L P F + L +DL
Sbjct: 11 ACPAQCSCSGTDVHCNSKSLASVPAGIPTNAKSLNFNYNQITKLEPGVFDSLTLLTYLDL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
S NQ++ + F L LT L L NN L +P G F L L + + N + C C +
Sbjct: 71 SNNQLTALPEGVFDKLTQLTHLVLYNNQLKSVPRGAFDNLKSLTHIWLFNNPWDCACSDI 130
Query: 215 SWLHRWLKRYPRL 227
+L RW+ ++P +
Sbjct: 131 LYLSRWISQHPGV 143
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 47/118 (39%), Gaps = 18/118 (15%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRV-----DKVLLYSYISN 347
+CP C C+ V C K L VP +P L + + I ++ D + L +Y+
Sbjct: 11 ACPAQCSCSGTDVHCNSKSLASVPAGIPTNAKSLNFNYNQITKLEPGVFDSLTLLTYLD- 69
Query: 348 NFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N +T LP F +L + L N + +P AF N K L +
Sbjct: 70 -----------LSNNQLTALPEGVFDKLTQLTHLVLYNNQLKSVPRGAFDNLKSLTHI 116
>gi|395815457|ref|XP_003781243.1| PREDICTED: leucine-rich repeat-containing G-protein coupled
receptor 4 isoform 1 [Otolemur garnettii]
Length = 951
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 62/121 (51%), Gaps = 3/121 (2%)
Query: 87 PTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFA 145
P+G AA P C PC C D VDC KGL VP L T L + N+IT+LP F
Sbjct: 21 PSG--AAPPLCAAPCSCDGDRRVDCSGKGLTAVPEGLSAFTQALDISMNNITQLPEDVFK 78
Query: 146 NYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISE 205
N+ L + L+ N +S + A GLK L LTL NN L +P L L++LR+
Sbjct: 79 NFPFLEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDA 138
Query: 206 N 206
N
Sbjct: 139 N 139
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 55/122 (45%), Gaps = 9/122 (7%)
Query: 285 PTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYS 343
P+G AA P C PC C D VDC KGL VP E + T + I + L
Sbjct: 21 PSG--AAPPLCAAPCSCDGDRRVDCSGKGLTAVP----EGLSAFTQALDISMNNITQLPE 74
Query: 344 YISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLR 403
+ NF +L ND++ + PKA + K L+ + L+ N + +P +A L+
Sbjct: 75 DVFKNFPFL--EELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQ 132
Query: 404 RM 405
+
Sbjct: 133 SL 134
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 66/150 (44%), Gaps = 10/150 (6%)
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADG-----IVDCREKGLNKVP 119
I NI +PE FK + P + + S HP + G ++ + L VP
Sbjct: 64 ISMNNITQLPEDVFK-NFPFLEELQLAGNDLSFIHP-KALSGLKELKVLTLQNNQLKTVP 121
Query: 120 ---ILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
I A LRL+ N IT +P +F +LR + L N +++V V L +L +
Sbjct: 122 SEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVRPLSNLPTLQA 181
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
LTL N ++ +PD F L L L + N
Sbjct: 182 LTLALNKISSIPDFAFTNLSSLVVLHLHNN 211
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 111/274 (40%), Gaps = 73/274 (26%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
++ NN+T LP+ VF L L+++ N LS++H P+ A S
Sbjct: 64 ISMNNITQLPEDVFKNFPFLEELQLAGND------LSFIH------PK--------ALSG 103
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECA-------AEPSCPHPCRCADGIVDCR-----E 112
+K +L + ++ K + P E G A A P +G+V R +
Sbjct: 104 LKELKVLTLQNNQLK-TVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDD 162
Query: 113 KGLNKVPIL----LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAF 168
L +VP+ LP L L N I+ +P AF N L + L N+I + F
Sbjct: 163 NSLTEVPVRPLSNLP-TLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHCF 221
Query: 169 QGLKSLTSLTLNNNNL-----------------------TYLPDGVFAELFRLRTLRISE 205
GL +L +L LN NNL + +PDG F LRT+ + +
Sbjct: 222 DGLDNLETLDLNYNNLGEFPQAIKALPSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYD 281
Query: 206 N--SFICDC---HLSWLH-------RWLKRYPRL 227
N SF+ + +LS LH ++R+P L
Sbjct: 282 NPLSFVGNSAFHNLSDLHSLVIRGASMVQRFPNL 315
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
A E+ L++N I ++ F LR +DLS+N I ++ AF L +T+L ++ N
Sbjct: 365 HALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIHSRAFAKLGPITNLDVSFNE 424
Query: 184 LTYLP 188
LT P
Sbjct: 425 LTSFP 429
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 86/214 (40%), Gaps = 57/214 (26%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISEN--SFICDC---HLSWLHR-------WLKRYPR 52
++N+++ +PDG F LRT+ + +N SF+ + +LS LH ++R+P
Sbjct: 255 FHSNSISVIPDGAFGGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQRFPN 314
Query: 53 LGLYTKCFAPSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCRE 112
L T + G I IP + C+E
Sbjct: 315 LT-GTVHLESLTLTGTKISSIPNNL--------------------------------CQE 341
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLK 172
+ + + L L N+I +LP +F L I L +NQI ++ FQGL
Sbjct: 342 QKMLRT----------LDLSYNNIRDLP--SFNGCHALEEISLQRNQIYQIKEGTFQGLI 389
Query: 173 SLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
SL L L+ N + + FA+L + L +S N
Sbjct: 390 SLRILDLSRNLIHEIHSRAFAKLGPITNLDVSFN 423
>gi|81175447|gb|ABB59061.1| variable lymphocyte receptor A [Eptatretus stoutii]
Length = 300
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
Query: 101 CRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKN 158
C C D VDC KGL +P +P TT+LRL QN +++L P AF + +L + L +N
Sbjct: 34 CTCNDQTKNVDCSSKGLTAIPSNIPVDTTQLRLHQNSLSKLSPTAFHHLSKLTYLSLGEN 93
Query: 159 QISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
Q+ + F L +L L L N LT LP G+F +L L+TL + N
Sbjct: 94 QLQTLPTGVFDHLVNLNELRLGTNQLTSLPPGIFDKLTELKTLYLQNNQL 143
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 10/110 (9%)
Query: 299 CRCADGI--VDCREKGLNKVPILLPEATTEL-TYMVSIDRVDKVLLYSYISNNFKRWTNR 355
C C D VDC KGL +P +P TT+L + S+ ++ + + + T
Sbjct: 34 CTCNDQTKNVDCSSKGLTAIPSNIPVDTTQLRLHQNSLSKLSPTAFH-----HLSKLTYL 88
Query: 356 SRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
S L +N + LP F + L +RL N +T LPP F L+ +
Sbjct: 89 S--LGENQLQTLPTGVFDHLVNLNELRLGTNQLTSLPPGIFDKLTELKTL 136
>gi|327260970|ref|XP_003215305.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein
2-like [Anolis carolinensis]
Length = 516
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 61/117 (52%)
Query: 92 AAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
A +CP CRC + C +G + VP + L L N ITEL FA++ +L
Sbjct: 29 ALGTACPPKCRCEKLLFYCDSQGFHSVPNTTDKGCLGLSLRHNFITELEGDQFASFSQLT 88
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ L NQI + D FQGL L L L++N ++YLP+ F++L L+ L +S N
Sbjct: 89 WLHLDHNQIDTIREDGFQGLYKLKELILSSNKISYLPNTTFSQLLNLQHLDLSSNQL 145
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 103/251 (41%), Gaps = 23/251 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N ++YLP+ F++L L+ L +S N LS LH P L +
Sbjct: 116 LSSNKISYLPNTTFSQLLNLQHLDLSSN------QLSALH------PELFYGLRKLQTLS 163
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL--------N 116
++ ++ IP F ++ S G++ RE L N
Sbjct: 164 LRSNSLRTIPVRLFSDCRSLDFLDLSTNRLRSLAR--NGFAGLIKLRELHLEHNQLTKIN 221
Query: 117 KVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
L L L+ N I+ L + L +IDLS N + + + F+ + +L
Sbjct: 222 FAHFLRLSNLHMLFLQGNKISNLTCGMEWTWVTLEKIDLSGNDLKAIDMTVFEIMPNLKV 281
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFA 235
L ++NN L L V L L T+ +S N + C + L WL + R C +
Sbjct: 282 LLMDNNKLITLESKVLYSLKTLTTVGLSSNPWECSPKICSLATWLSGFQGRWEHSILCHS 341
Query: 236 PSHIKGQNILD 246
P+H +G++ILD
Sbjct: 342 PNHTQGEDILD 352
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 46/79 (58%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL L N I+ LP F+ L+ +DLS NQ+S + + F GL+ L +L+L +N+L +
Sbjct: 113 ELILSSNKISYLPNTTFSQLLNLQHLDLSSNQLSALHPELFYGLRKLQTLSLRSNSLRTI 172
Query: 188 PDGVFAELFRLRTLRISEN 206
P +F++ L L +S N
Sbjct: 173 PVRLFSDCRSLDFLDLSTN 191
>gi|284010713|dbj|BAI66836.1| variable lymphocyte receptor A [Eptatretus burgeri]
Length = 274
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 61/108 (56%)
Query: 101 CRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQI 160
C VDC +K L +P +P TT+LRL QN +++L P AF N K L ++L NQ+
Sbjct: 17 CNNNKNSVDCADKKLTAIPSNIPPDTTQLRLHQNSLSKLSPTAFHNLKELTYLNLDTNQL 76
Query: 161 SKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ F L +L +L LNNN L L DGVF +L +L L ++EN
Sbjct: 77 QTLPPGVFDHLVALGTLHLNNNQLQSLSDGVFEKLTQLTHLALNENQL 124
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 62/140 (44%), Gaps = 2/140 (1%)
Query: 127 TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTY 186
T L L +N + LP F +L + L NQ+ V F L LT L L N L
Sbjct: 115 THLALNENQLQSLPNGVFDKLTQLTTLYLRNNQLQSVPHGVFDNLAKLTRLELQRNQLRS 174
Query: 187 LPDGVFAELFRLRTLRISENSFICDC-HLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNIL 245
+P+G F L +L L++ EN + C C + +L W+ R + + A + + +L
Sbjct: 175 VPEGAFNSLEKLALLQLEENPWDCSCRDILYLRNWI-REKQGNVSNIEAAECAVGNKAVL 233
Query: 246 DIPEHEFKCSGSSMETRSKI 265
+I E + S T + I
Sbjct: 234 EITEKDAASDCVSPNTTTAI 253
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 38/98 (38%), Gaps = 30/98 (30%)
Query: 299 CRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRR 358
C VDC +K L +P +P TT+L R
Sbjct: 17 CNNNKNSVDCADKKLTAIPSNIPPDTTQL------------------------------R 46
Query: 359 LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
L QN +++L P AF N K L + L+ N + LPP F
Sbjct: 47 LHQNSLSKLSPTAFHNLKELTYLNLDTNQLQTLPPGVF 84
>gi|354494479|ref|XP_003509364.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 2 [Cricetulus griseus]
Length = 1039
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 71/130 (54%), Gaps = 5/130 (3%)
Query: 129 LRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLT 185
L L N+I+ E +AFA K L ++ L NQI + AF GL+SL L LNNN +T
Sbjct: 342 LDLRNNEISWAIEDSSEAFAGLKSLTKLTLQGNQIKSITQKAFIGLESLEYLDLNNNAIT 401
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAPSHIKGQNI 244
+ + F++ L+ L ++ +S +CDCHL WL +WL + C P + GQ+I
Sbjct: 402 SIQENAFSQT-HLKELVLNTSSLLCDCHLKWLLQWLVDNNFHHSVNVSCAHPEWLAGQSI 460
Query: 245 LDIPEHEFKC 254
L++ +F C
Sbjct: 461 LNVDLKDFVC 470
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 114 GLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKS 173
G+NK + +L + QN I + P A+ +RL +DLS NQ++++ AF GL
Sbjct: 255 GVNKGWLYGLRMLQQLYMSQNAIERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSL 314
Query: 174 LTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
L L L +N +T++ DGVF L L+TL + N
Sbjct: 315 LERLNLGDNRVTHIADGVFRFLSNLQTLDLRNN 347
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAPS 63
LNNN +T + + F++ L+ L ++ +S +CDCHL WL +WL + C P
Sbjct: 395 LNNNAITSIQENAFSQT-HLKELVLNTSSLLCDCHLKWLLQWLVDNNFHHSVNVSCAHPE 453
Query: 64 HIKGQNILDIPEHEFKC 80
+ GQ+IL++ +F C
Sbjct: 454 WLAGQSILNVDLKDFVC 470
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
++L +N I+ +PPK F L+ ++L +N+I V FQGL SL SL + N ++ L
Sbjct: 175 VKLNRNRISMIPPKVF-KLPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGISKLK 233
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLH 218
DG F L + L + N+ + + WL+
Sbjct: 234 DGAFFGLNNMEELELEHNN-LTGVNKGWLY 262
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L++N I + F LR + + +N ISK+ AF GL ++ L L +NNLT +
Sbjct: 198 LELKRNRIKIVEGLTFQGLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTGVN 257
Query: 189 DGVFAELFRLRTLRISENSF 208
G L L+ L +S+N+
Sbjct: 258 KGWLYGLRMLQQLYMSQNAI 277
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 57/149 (38%), Gaps = 51/149 (34%)
Query: 97 CPHPCRCADGIVDCREKGL-----------------------NKVPI----LLPEATTEL 129
CP PC C ++DC + L N++ I L + E+
Sbjct: 21 CPAPCACRLPLLDCSRRKLPAPSWRALSGPLPPDTSSLDLSHNRLSIWNISLESQTLQEV 80
Query: 130 RLEQNDITELP-----------------------PKAFANYKRLRRIDLSKNQISKVAVD 166
++ N++TE+P +A Y L +DLS N IS++
Sbjct: 81 KMNYNELTEIPYFGEPTPNITLLSLVHNLIPEINAEALQLYSALESLDLSSNIISEIKTS 140
Query: 167 AFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
+F + SL L L+NN +T L G F L
Sbjct: 141 SFPQM-SLKYLNLSNNRITTLEAGCFDNL 168
>gi|301614568|ref|XP_002936762.1| PREDICTED: probable G-protein coupled receptor 125-like [Xenopus
(Silurana) tropicalis]
Length = 1313
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 64/126 (50%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N I+ + P AF +R DL+ N+I + D F+GL +L L L+ N + L
Sbjct: 105 LDLRNNLISSIEPGAFLGLVERKRRDLANNRIGCLNADIFKGLTNLAKLNLSGNMFSSLA 164
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
G F L L++L + +CDC+L W+ RW++ T+C P ++GQ + +
Sbjct: 165 QGTFVNLVSLKSLEFQTDFLLCDCNLMWMLRWIREKNITVRDTRCSYPKSLQGQPVTSLK 224
Query: 249 EHEFKC 254
+ + C
Sbjct: 225 QEQLTC 230
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N + L G F L L++L + +CDC+L W+ RW++ T+C P
Sbjct: 155 LSGNMFSSLAQGTFVNLVSLKSLEFQTDFLLCDCNLMWMLRWIREKNITVRDTRCSYPKS 214
Query: 65 IKGQNILDIPEHEFKCSGPVEKPT 88
++GQ + + + + C P+E P+
Sbjct: 215 LQGQPVTSLKQEQLTCESPLELPS 238
>gi|119928541|dbj|BAF43096.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 169
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 65/129 (50%), Gaps = 1/129 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C V+C K L VP +P L L+ N IT+L P F + L ++L
Sbjct: 11 ACPAQCSCPGAAVNCNSKSLASVPAGIPSNKQYLALQDNRITKLEPGVFDSLTALTFLNL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ++ + V F L LT L+L+ N L +P G F L L + + +N + C C +
Sbjct: 71 GNNQLTALPVGVFNKLTQLTHLSLHTNQLKSIPMGAFDNLKSLTHIWLFDNPWDCACSDI 130
Query: 215 SWLHRWLKR 223
+L RW+ R
Sbjct: 131 LYLSRWISR 139
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 45/113 (39%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C V+C K L VP +P L + I +++ + S + F
Sbjct: 11 ACPAQCSCPGAAVNCNSKSLASVPAGIPSNKQYLALQDNRITKLEPGVFDSLTALTF--- 67
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N +T LP F +L + L N + +P AF N K L +
Sbjct: 68 ----LNLGNNQLTALPVGVFNKLTQLTHLSLHTNQLKSIPMGAFDNLKSLTHI 116
>gi|395507454|ref|XP_003758039.1| PREDICTED: G-protein coupled receptor 124 [Sarcophilus harrisii]
Length = 1458
Score = 81.3 bits (199), Expect = 7e-13, Method: Composition-based stats.
Identities = 44/131 (33%), Positives = 69/131 (52%), Gaps = 1/131 (0%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L L+ N I+ + P AF L+R+DLS N+I ++ AFQGL +L L ++ N + L
Sbjct: 107 KLDLKNNLISTVHPGAFLGLGELKRLDLSNNRIGCLSSGAFQGLNNLNRLNMSGNIFSSL 166
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFAPSHIKGQNILD 246
GVF EL L+ + CDCHL W+ W + + +L T C PS + Q +
Sbjct: 167 SAGVFDELPALKVVDFGTEFLTCDCHLRWVLPWARNHSVQLFERTLCAYPSSLHAQALRS 226
Query: 247 IPEHEFKCSGS 257
+ + + C G+
Sbjct: 227 LQDTQLHCEGA 237
Score = 46.6 bits (109), Expect = 0.020, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYP-RLGLYTKCFAPS 63
++ N + L GVF EL L+ + CDCHL W+ W + + +L T C PS
Sbjct: 158 MSGNIFSSLSAGVFDELPALKVVDFGTEFLTCDCHLRWVLPWARNHSVQLFERTLCAYPS 217
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
+ Q + + + + C G +E
Sbjct: 218 SLHAQALRSLQDTQLHCEGALE 239
>gi|313227037|emb|CBY22184.1| unnamed protein product [Oikopleura dioica]
Length = 555
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 88/200 (44%), Gaps = 25/200 (12%)
Query: 27 LRISENSFICDCHLSWLHRWLKRYPR-LGLYTKCFAPSHIKGQNILDIPEHEFKCSGPVE 85
L N +CDC L + W+K P + + + CFAP GQNI+ + + +F C+
Sbjct: 303 LNFDRNELVCDCGLRKFNEWVKAGPDGMKIISNCFAPEVFFGQNIVQLEQEDF-CT---- 357
Query: 86 KPTGECAAEPSCPHPCRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKA 143
K T + +CP C CA + V+C +VP + T L L N + L
Sbjct: 358 KFTNDLF---TCPEGCSCASNVHHVNCIALNFEEVPSEIGIGTKLLDLRLNKLEILEELE 414
Query: 144 FANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL--------------PD 189
FA L + L NQI V AF+GLK L L L+ NN+ YL
Sbjct: 415 FAGLSYLESLHLDLNQIMLVKQGAFRGLKKLIYLYLSQNNIKYLMVCINHIICFVKKIKP 474
Query: 190 GVFAELFRLRTLRISENSFI 209
G F +L + L +S NS +
Sbjct: 475 GCFEDLENISYLYLSHNSIL 494
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 131/344 (38%), Gaps = 75/344 (21%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
+A L L N +TE+P A N ++L + L N+I V F+GL +L L L+NN
Sbjct: 204 KAIKNLDLSANLLTEIPV-AIKNLEKLEGLSLQGNKIVSVEDSDFEGLANLEKLDLSNNL 262
Query: 184 LTYLPDGVFAELFRLRTLRIS-----------------------ENSFICDCHLSWLHRW 220
+ + VF L +S N +CDC L + W
Sbjct: 263 IKSISPQVFLSTVSLALADVSGNEIKILEPFEGVNLGQTELNFDRNELVCDCGLRKFNEW 322
Query: 221 LKRYPR-LGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNS 279
+K P + + + CFAP GQNI+ + + +F C+ + + + C+++ H N
Sbjct: 323 VKAGPDGMKIISNCFAPEVFFGQNIVQLEQEDF-CTKFTNDLFTCPEGCSCASNVHHVNC 381
Query: 280 CPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSID----- 334
+ P ++D R LNK+ IL L+Y+ S+
Sbjct: 382 IALNF--------EEVPSEIGIGTKLLDLR---LNKLEILEELEFAGLSYLESLHLDLNQ 430
Query: 335 ---------RVDKVLLYSYISNN-----------------------FKRWTNRSR-RLEQ 361
R K L+Y Y+S N F+ N S L
Sbjct: 431 IMLVKQGAFRGLKKLIYLYLSQNNIKYLMVCINHIICFVKKIKPGCFEDLENISYLYLSH 490
Query: 362 NDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N I E+P F K L ++L+ N IT+ F R+R++
Sbjct: 491 NSILEIPMAVFRPIKHLYDLQLQHNQITKWKLGYFEKDSRIRKL 534
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 28/141 (19%)
Query: 94 EPSCPHPCRC----------ADGIV----DCREKGLNKVPIL------------LPEA-- 125
+ SC CRC A GI+ D +K L++V L PE
Sbjct: 26 DESCHSYCRCNSQKKTIICYAQGIITPKFDLEDKSLSEVVRLDLRSNQIEELAVFPEMPK 85
Query: 126 TTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLT 185
L+L++N I+ + P AF + + + L++N ++++ F GL + L+L+ N L
Sbjct: 86 LNFLQLQENAISLIEPNAFNKTRGVNNVFLNENHLTRIEKGIFSGLSEVKLLSLSRNKLD 145
Query: 186 YLPDGVFAELFRLRTLRISEN 206
+ + F EL L TL +SEN
Sbjct: 146 KIENNAFIELKSLITLSLSEN 166
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 116 NKVPILLPEATTELR------LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ 169
N + ++ P A + R L +N +T + F+ ++ + LS+N++ K+ +AF
Sbjct: 94 NAISLIEPNAFNKTRGVNNVFLNENHLTRIEKGIFSGLSEVKLLSLSRNKLDKIENNAFI 153
Query: 170 GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
LKSL +L+L+ N L + + A L +L+TL ++ N
Sbjct: 154 ELKSLITLSLSENFLDKMTPKILAGLEKLKTLELNSNQL 192
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 12/108 (11%)
Query: 99 HPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKN 158
H R GI GL++V +L L +N + ++ AF K L + LS+N
Sbjct: 119 HLTRIEKGIFS----GLSEVKLL--------SLSRNKLDKIENNAFIELKSLITLSLSEN 166
Query: 159 QISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
+ K+ GL+ L +L LN+N L + +F+E ++ L +S N
Sbjct: 167 FLDKMTPKILAGLEKLKTLELNSNQLRKVHKDIFSETKAIKNLDLSAN 214
>gi|76162223|gb|ABA40185.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 168
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 14/169 (8%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C V+C + L VP +P L L N IT+L P F + L+++ L
Sbjct: 1 ACPSQCSCDQTTVNCHSRRLTSVPAGIPTNRQNLWLHDNQITKLEPGVFDSLVNLQQLHL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
+NQ+S + F L LT L L+ N L +P G F L L + +S N + C+C +
Sbjct: 61 YQNQLSALPTGVFDNLTQLTHLGLHTNQLKSIPRGAFDNLKSLTHIWLSSNPWDCECSDI 120
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L W+ ++ + PS G + KCSG++ R+
Sbjct: 121 LYLKNWIVQHASI------VNPSGYGGVD-------NVKCSGTNTPVRA 156
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTEL-TYMVSIDRVDKVLLYSYISNNFKRW 352
+CP C C V+C + L VP +P L + I +++ + S + N ++
Sbjct: 1 ACPSQCSCDQTTVNCHSRRLTSVPAGIPTNRQNLWLHDNQITKLEPGVFDSLV--NLQQ- 57
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L QN ++ LP F N +L + L N + +P AF N K L +
Sbjct: 58 ----LHLYQNQLSALPTGVFDNLTQLTHLGLHTNQLKSIPRGAFDNLKSLTHI 106
>gi|81175433|gb|ABB59054.1| variable lymphocyte receptor B [Eptatretus stoutii]
Length = 309
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 58/113 (51%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C KGL VP +P +TT L L QN + LP F +L ++ L
Sbjct: 23 ACPSRCSCSGTQVHCNSKGLTSVPTGIPASTTYLDLSQNQLQSLPHGVFDQLTQLTKLWL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+ NQ+ + F L L L LNNN L LP GVF +L +L L ++ N
Sbjct: 83 NNNQLQSLPSGVFDKLTQLAKLWLNNNKLQSLPIGVFDKLTQLTKLYLNNNQL 135
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V C KGL VP +P +TT L + + L S F + T
Sbjct: 23 ACPSRCSCSGTQVHCNSKGLTSVPTGIPASTTYL-------DLSQNQLQSLPHGVFDQLT 75
Query: 354 NRSRR-LEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ L N + LP F +L ++ L N + LP F +L ++
Sbjct: 76 QLTKLWLNNNQLQSLPSGVFDKLTQLAKLWLNNNKLQSLPIGVFDKLTQLTKL 128
>gi|76161671|gb|ABA39932.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 171
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C +V+C+ L VP +P L L N IT+L P F + +L +DL
Sbjct: 1 ACPSQCSCDQTLVNCQNIRLASVPAGIPTDKQRLWLNNNQITKLEPGVFDSLTQLTILDL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
+ NQ+ + F L LT LTL+ N + +P G F L L + + N + C C +
Sbjct: 61 NSNQLQALPTGVFNKLTQLTRLTLSTNQMKSIPRGAFDNLKSLTHIWLYNNPWDCACSDI 120
Query: 215 SWLHRWLKRYP 225
+L RW+ ++P
Sbjct: 121 LYLSRWISQHP 131
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C +V+C+ L VP +P L ++ +++ K L + ++ + T
Sbjct: 1 ACPSQCSCDQTLVNCQNIRLASVPAGIPTDKQRL--WLNNNQITK--LEPGVFDSLTQLT 56
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + LP F +L R+ L N + +P AF N K L +
Sbjct: 57 --ILDLNSNQLQALPTGVFNKLTQLTRLTLSTNQMKSIPRGAFDNLKSLTHI 106
>gi|284010952|dbj|BAI66951.1| variable lymphocyte receptor B [Eptatretus burgeri]
Length = 206
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 78/171 (45%), Gaps = 15/171 (8%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C KGL VP +P +TT L+L N + LP F +L + L
Sbjct: 23 ACPSRCSCSGTEVNCYNKGLTSVPSGIPASTTNLQLYSNKLQSLPDGVFDKLTKLTILYL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
+N++ + F L L L L+ N L +PDG+F L L+ + + N + C C +
Sbjct: 83 HENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIYLYSNPWDCTCPGI 142
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKI 265
+L W+ ++ G+ + I KCSGS RS I
Sbjct: 143 RYLSEWINKHS--GIISDG------------SINPDSAKCSGSGKPVRSII 179
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C KGL VP +P +TT L ++ L S F + T
Sbjct: 23 ACPSRCSCSGTEVNCYNKGLTSVPSGIPASTTNL-------QLYSNKLQSLPDGVFDKLT 75
Query: 354 NRS-RRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L +N + LP F +L+ + L+ N + +P F L+++
Sbjct: 76 KLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKI 128
>gi|395543598|ref|XP_003773704.1| PREDICTED: leucine-rich repeat-containing G-protein coupled
receptor 4, partial [Sarcophilus harrisii]
Length = 926
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 59/111 (53%), Gaps = 1/111 (0%)
Query: 97 CPHPCRC-ADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
CP PCRC D VDC +GL VP L T L + N+IT+LP AF N+ L + L
Sbjct: 2 CPAPCRCDGDRGVDCTGRGLTAVPDGLSAFTHSLDISMNNITQLPEDAFKNFPFLEELRL 61
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
+ N +S + A GLK L LTL NN L +P L L++LR+ N
Sbjct: 62 AGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSSLQSLRLDAN 112
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 47/112 (41%), Gaps = 31/112 (27%)
Query: 295 CPHPCRC-ADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
CP PCRC D VDC +GL VP L T
Sbjct: 2 CPAPCRCDGDRGVDCTGRGLTAVPDGLSAFT----------------------------- 32
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
S + N+IT+LP AF N+ L +RL ND++ + PKA + K L+ +
Sbjct: 33 -HSLDISMNNITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKELKVL 83
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL--NKVPILL 122
I NI +PE FK + P + + S HP + G+ + + L N++ +
Sbjct: 37 ISMNNITQLPEDAFK-NFPFLEELRLAGNDLSFIHP-KALSGLKELKVLTLQNNQLKTVP 94
Query: 123 PEAT------TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
EA LRL+ N IT +P ++F +LR + L N +S+V V L SL +
Sbjct: 95 SEAIRGLSSLQSLRLDANHITSVPEESFEGLVQLRHLWLDDNSLSEVPVRPLSNLPSLQA 154
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
LTL N +T +PD F L L L + N
Sbjct: 155 LTLALNKITNIPDFAFTNLSSLVVLHLHNN 184
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 84/199 (42%), Gaps = 26/199 (13%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLH-RWLKRYPRLGLYTKCFAPS 63
++ NN+T LP+ F L LR++ N LS++H + L L + T
Sbjct: 37 ISMNNITQLPEDAFKNFPFLEELRLAGND------LSFIHPKALSGLKELKVLT------ 84
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCR-----EKGLNKV 118
++ + +P + ++ + S P +G+V R + L++V
Sbjct: 85 -LQNNQLKTVPSEAIRGLSSLQSLRLDANHITSVPE--ESFEGLVQLRHLWLDDNSLSEV 141
Query: 119 PIL----LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSL 174
P+ LP + L L N IT +P AF N L + L N+I + F GL +L
Sbjct: 142 PVRPLSNLP-SLQALTLALNKITNIPDFAFTNLSSLVVLHLHNNKIKTLGQHCFDGLDNL 200
Query: 175 TSLTLNNNNLTYLPDGVFA 193
+L LN NNL P + A
Sbjct: 201 ETLDLNYNNLGEFPQAIKA 219
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N+I ELP +F L I L NQI ++ FQGL SL L L+ N + +
Sbjct: 321 LDLSYNNIQELP--SFNGCSALEEISLQHNQIHEIKESTFQGLTSLRILDLSRNLIQEVH 378
Query: 189 DGVFAELFRLRTLRISEN 206
+G F +L + L IS N
Sbjct: 379 NGAFIKLGSITNLDISFN 396
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%)
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
A E+ L+ N I E+ F LR +DLS+N I +V AF L S+T+L ++ N
Sbjct: 338 SALEEISLQHNQIHEIKESTFQGLTSLRILDLSRNLIQEVHNGAFIKLGSITNLDISFNE 397
Query: 184 LTYLP 188
LT P
Sbjct: 398 LTSFP 402
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
L L I+ +P + K+L+ +DLS N I ++ +F G +L ++L +N + +
Sbjct: 296 SLTLTGTKISSIPDNLCQDRKKLKTLDLSYNNIQELP--SFNGCSALEEISLQHNQIHEI 353
Query: 188 PDGVFAELFRLRTLRISEN 206
+ F L LR L +S N
Sbjct: 354 KESTFQGLTSLRILDLSRN 372
>gi|327266172|ref|XP_003217880.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 1-like [Anolis carolinensis]
Length = 1091
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 69/130 (53%), Gaps = 4/130 (3%)
Query: 129 LRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLT 185
L L+ N+I+ E AF + L + L N+I VA +AF GL++L L L N +
Sbjct: 363 LDLDHNEISGTIEDISGAFTGLEHLSMLTLFGNKIKSVAKEAFSGLEALEHLNLGANAIR 422
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAPSHIKGQNI 244
+ + FA+L L+ L I+ SF+CDC L WL WL K+ R + C P +KG++I
Sbjct: 423 SVQEDAFAKLKNLKELHINSESFLCDCQLKWLPSWLTKKELRPFVEATCAHPESLKGRSI 482
Query: 245 LDIPEHEFKC 254
D+ F C
Sbjct: 483 FDVVPESFVC 492
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 8/102 (7%)
Query: 114 GLNKVPIL-------LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVD 166
G N++ IL L E+ LRL +N I+++P K F RL +++L++N+I ++
Sbjct: 174 GSNRISILETKAFDSLSESLLTLRLSKNRISQIPVKGF-KLPRLMQLELNRNRIRQIDGL 232
Query: 167 AFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
FQGL SL L L NN++ L DG F L +++ L + N+
Sbjct: 233 TFQGLDSLEVLKLQRNNISKLTDGAFWGLAKMQVLHLEYNAL 274
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAPS 63
L N + + + FA+L L+ L I+ SF+CDC L WL WL K+ R + C P
Sbjct: 416 LGANAIRSVQEDAFAKLKNLKELHINSESFLCDCQLKWLPSWLTKKELRPFVEATCAHPE 475
Query: 64 HIKGQNILDIPEHEFKC 80
+KG++I D+ F C
Sbjct: 476 SLKGRSIFDVVPESFVC 492
>gi|296478916|tpg|DAA21031.1| TPA: leucine-rich repeat-containing G protein-coupled receptor
5-like [Bos taurus]
Length = 986
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 70/136 (51%), Gaps = 10/136 (7%)
Query: 96 SCPHPCRCAD-GI---VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
CP PCRC + GI VDC E+GL+ VP L T L L N +TEL P F + + L
Sbjct: 76 GCPVPCRCREAGILLWVDCSERGLSTVPAGLDPLTAYLDLSMNSLTELWPGVFHHLRFLE 135
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN--SFI 209
+ LS N+++ + AF GL SL L L NN L +P EL L++LR+ N S +
Sbjct: 136 ELRLSGNRLAHIPGQAFSGLSSLKILMLQNNRLGGIPAEALWELPGLQSLRLDANLISLV 195
Query: 210 CDCHLSWL----HRWL 221
D L H WL
Sbjct: 196 PDRSFEGLTSLRHLWL 211
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 124 EATTELR---LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN 180
E T LR L+ N +TE+P +A ++ + L+ + L+ N+I +V AF L SL L L+
Sbjct: 201 EGLTSLRHLWLDDNALTEIPVRALSHLRALQAVTLALNRIGRVPDYAFWNLSSLVVLHLH 260
Query: 181 NNNLTYLPDGVFAELFRLRTLRISENSF 208
NN + +L F L L TL ++ N
Sbjct: 261 NNRIRHLGAHSFEGLQNLETLDLNCNQL 288
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 46/114 (40%), Gaps = 34/114 (29%)
Query: 294 SCPHPCRCAD-GI---VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNF 349
CP PCRC + GI VDC E+GL+ VP L T L
Sbjct: 76 GCPVPCRCREAGILLWVDCSERGLSTVPAGLDPLTAYLD--------------------- 114
Query: 350 KRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLR 403
L N +TEL P F + + L +RL N + +P +AF+ L+
Sbjct: 115 ---------LSMNSLTELWPGVFHHLRFLEELRLSGNRLAHIPGQAFSGLSSLK 159
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 35/72 (48%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
E+ L+ N I E+ F LR +DLS N I + +AF L+SL L L N L+ L
Sbjct: 420 EIGLQHNRIWEVRADTFRELTFLRSLDLSWNAIRSIHPEAFSTLRSLVKLDLTGNQLSVL 479
Query: 188 PDGVFAELFRLR 199
P L L+
Sbjct: 480 PLAGLGGLVHLK 491
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 40/102 (39%), Gaps = 23/102 (22%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ------------------ 169
EL N+I +P KAF L+ I N I V AFQ
Sbjct: 303 ELGFHNNNIRAIPEKAFLGNPLLQTIHFYDNPIQFVGRSAFQHLPGLHTLSLNGATDIQE 362
Query: 170 -----GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
G SL SLTL L LP G+ +L RLR L +S N
Sbjct: 363 FPDLRGTTSLESLTLTRAGLQRLPPGMCQQLPRLRVLELSHN 404
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 15/120 (12%)
Query: 100 PCRCADGIVDCR-----EKGLNKVPILLPEATTELRLEQ------NDITELPPKAFANYK 148
P R +G+ R + L ++P+ A + LR Q N I +P AF N
Sbjct: 196 PDRSFEGLTSLRHLWLDDNALTEIPV---RALSHLRALQAVTLALNRIGRVPDYAFWNLS 252
Query: 149 RLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
L + L N+I + +F+GL++L +L LN N L P + L RL+ L N+
Sbjct: 253 SLVVLHLHNNRIRHLGAHSFEGLQNLETLDLNCNQLHEFPVAI-QTLGRLQELGFHNNNI 311
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N I L +F + L +DL+ NQ+ + V A Q L L L +NNN+ +P
Sbjct: 257 LHLHNNRIRHLGAHSFEGLQNLETLDLNCNQLHEFPV-AIQTLGRLQELGFHNNNIRAIP 315
Query: 189 DGVFAELFRLRTLRISEN 206
+ F L+T+ +N
Sbjct: 316 EKAFLGNPLLQTIHFYDN 333
>gi|119926431|dbj|BAF43242.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 166
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 1/128 (0%)
Query: 101 CRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQI 160
C C+ VDCR K VP +P L L N+IT L P F + +L + L NQ+
Sbjct: 3 CSCSGTTVDCRSKRHASVPAGIPTNALNLWLNHNEITNLEPGVFDSLTQLTYLHLGANQL 62
Query: 161 SKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-LSWLHR 219
+ + V F L LT L L+NN L +P G F L L + + N + C C + +L R
Sbjct: 63 TALPVGVFDKLIQLTHLGLHNNQLKSIPKGAFDNLKSLTHIWLLSNPWDCACSDILYLSR 122
Query: 220 WLKRYPRL 227
W+ ++P +
Sbjct: 123 WISQHPGV 130
>gi|119928674|dbj|BAF43158.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 171
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 11/169 (6%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC + L VP +P T L L+ N IT+L P F L+++ L
Sbjct: 11 ACPAQCSCSGTSVDCSARSLASVPAGIPTTTQSLSLQVNQITKLEPGVFDRLVNLQQLWL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
+ NQ+ + F L L L L N L +P G F L L + + N + C C +
Sbjct: 71 NNNQLQALPAGVFDKLTQLVHLELQFNQLKSIPRGAFDNLKSLTHIWLFNNPWDCACSDI 130
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L RW+ ++P + + P P+H +CSG++ R+
Sbjct: 131 LYLSRWISQHPGVVRRAESGYPVD---------PDHA-RCSGTNTPVRA 169
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ VDC + L VP +P T L+ V+ + ++ + N + W
Sbjct: 11 ACPAQCSCSGTSVDCSARSLASVPAGIPTTTQSLSLQVNQITKLEPGVFDRLVNLQQLWL 70
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N N + LP F +L + L+ N + +P AF N K L +
Sbjct: 71 NN------NQLQALPAGVFDKLTQLVHLELQFNQLKSIPRGAFDNLKSLTHI 116
>gi|119926388|dbj|BAF43233.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 242
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 60/113 (53%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C KG+ VP +P T L L +N IT+L F + +L ++DL
Sbjct: 11 ACPAQCSCSGTEVNCWNKGIASVPAGIPTTTQTLHLYRNQITKLELGVFDSLAQLTQLDL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
S NQ + + F L +L L LNNN LT LP GVF +L +L + N
Sbjct: 71 SHNQFTALPARVFDRLVNLQQLWLNNNQLTSLPAGVFDKLTQLTVFNLRHNQL 123
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 6/109 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C KG+ VP +P TT T + +++ K+ L + ++ + T
Sbjct: 11 ACPAQCSCSGTEVNCWNKGIASVPAGIP--TTTQTLHLYRNQITKLELGVF--DSLAQLT 66
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
L N T LP + F L+++ L N +T LP F +L
Sbjct: 67 QLD--LSHNQFTALPARVFDRLVNLQQLWLNNNQLTSLPAGVFDKLTQL 113
>gi|119926266|dbj|BAF43175.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 171
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 68/133 (51%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C EK L VP +P T L L N IT+L P F + +L + L
Sbjct: 11 ACPAQCSCSGTTVNCAEKRLVSVPAGIPTTTQRLYLGSNQITKLEPGVFDSLTQLTNLGL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
+ NQ++ + F L +L L L+ N L +P G F L L + + N + C C +
Sbjct: 71 NTNQLTALPEGVFDHLVNLQWLVLHTNQLKSIPRGAFDNLKSLTHIYLFNNPWDCACSDI 130
Query: 215 SWLHRWLKRYPRL 227
+L RW+ ++P +
Sbjct: 131 LYLSRWISQHPGV 143
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C EK L VP +P T L Y+ S +++ K L + ++ + T
Sbjct: 11 ACPAQCSCSGTTVNCAEKRLVSVPAGIPTTTQRL-YLGS-NQITK--LEPGVFDSLTQLT 66
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N L N +T LP F + L+ + L N + +P AF N K L +
Sbjct: 67 NLG--LNTNQLTALPEGVFDHLVNLQWLVLHTNQLKSIPRGAFDNLKSLTHI 116
>gi|326671767|ref|XP_688817.3| PREDICTED: leucine-rich repeats and immunoglobulin-like domains 1
[Danio rerio]
Length = 899
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 109/267 (40%), Gaps = 36/267 (13%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSF--ICDCHLSWLHRWLKRY----------PR 52
L NN++ L DG F L R+R L + NS + L L L+ Y P
Sbjct: 233 LQRNNISKLTDGAFWGLARMRVLHLDYNSLREVNSGSLYGLESLLQLYLANNSISNFNPE 292
Query: 53 LGLYTKCFAPSHIKGQNILDIPEHEF-KCSGPVEKPTGECAAEPSCPHPCRCADGIVDCR 111
+ + ++ N+ + E F K + G S H I +
Sbjct: 293 GWGFCERLRELNLSYNNLTKLSEGSFAKLVNLISLRLGH----NSISH-------ITEGA 341
Query: 112 EKGLNKVPILLPEATTELRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDAF 168
+GL+ + L L+ NDI+ E AF + L ++ L N+I VA AF
Sbjct: 342 FRGLSSL--------RTLELDHNDISGTIEDTSGAFTGLENLNKLTLFGNKIKSVAKKAF 393
Query: 169 QGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW-LKRYPRL 227
GL++L L L N + + F+++ LR L I +SF+CDC L W W L R
Sbjct: 394 SGLEALEHLNLGENAIRSIQPEAFSKMKNLRYLHIQSDSFLCDCQLHWFPDWLLTRGLNP 453
Query: 228 GLYTKCFAPSHIKGQNILDIPEHEFKC 254
G+ C P +KG +I P F C
Sbjct: 454 GVQATCAHPESLKGTSIYQAPPQSFVC 480
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
LRL +N +T LP K +L +++LS+N++ + FQGL SL L L NN++ L
Sbjct: 184 LRLSRNRLTHLPVKGL-ELPKLTQLELSRNRLRLIEGLTFQGLSSLEVLKLQRNNISKLT 242
Query: 189 DGVFAELFRLRTLRISENSF 208
DG F L R+R L + NS
Sbjct: 243 DGAFWGLARMRVLHLDYNSL 262
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 1/112 (0%)
Query: 97 CPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLS 156
CP C C DC + VP LP++T L L N +T + +N LR + L
Sbjct: 32 CPQNCTCTLDTTDCSRLDMTDVPQDLPKSTVHLNLSHNKLTAVDMDILSNLPHLREVRLD 91
Query: 157 KNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
N+++ + S+ +L L++N + L + L TL +S N
Sbjct: 92 HNELTSIPSFG-DAAASVVTLLLHHNRIRRLEGSLLQNFSALETLDLSNNDI 142
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 24/104 (23%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNN------ 182
L+L++N+I++L AF R+R + L N + +V + GL+SL L L NN
Sbjct: 231 LKLQRNNISKLTDGAFWGLARMRVLHLDYNSLREVNSGSLYGLESLLQLYLANNSISNFN 290
Query: 183 ------------------NLTYLPDGVFAELFRLRTLRISENSF 208
NLT L +G FA+L L +LR+ NS
Sbjct: 291 PEGWGFCERLRELNLSYNNLTKLSEGSFAKLVNLISLRLGHNSI 334
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLK-SLTSLTLNNNN 183
A L L NDITEL F +++ + LS N+I + AF+ L SL L L+ N
Sbjct: 131 ALETLDLSNNDITELREHCFPLGLQIKDLHLSSNKIVHLEFGAFKNLAGSLQILRLSRNR 190
Query: 184 LTYLPDGVFAELFRLRTLRISEN 206
LT+LP EL +L L +S N
Sbjct: 191 LTHLPVKGL-ELPKLTQLELSRN 212
>gi|284010737|dbj|BAI66848.1| variable lymphocyte receptor A [Eptatretus burgeri]
Length = 263
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 77/164 (46%), Gaps = 25/164 (15%)
Query: 127 TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTY 186
T+LRL QN +T LPP F +L R+DL +NQ+ ++ F L +T+L LNNN L
Sbjct: 91 TDLRLHQNQLTSLPPGIFDKLTKLTRLDLDRNQLERLPNGVFDKLTKMTNLDLNNNKLHS 150
Query: 187 LPDGVFAELFRLRTL--------RISENSFICDCHLSWLH-----------------RWL 221
LP+GVF +L L+TL RI E +F L+WL +WL
Sbjct: 151 LPEGVFDKLAELKTLDLQYNQLKRIPEGAFNSLEKLTWLQLTNNPWDCTCNGIIYMAKWL 210
Query: 222 KRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKI 265
K+ GL A G+ +L+I E + S T + I
Sbjct: 211 KKKADEGLGGVDTAGCEKGGKAVLEITEKDAASDCVSPNTTTAI 254
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 54/101 (53%)
Query: 108 VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDA 167
VDC K L +P +P T +L L+ N ++ L KAF + +L ++L N++ +
Sbjct: 24 VDCSYKKLTAMPSNIPADTKKLELDYNKLSSLSAKAFHSLSKLTLLNLQGNKLQTLPAGV 83
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
F L +LT L L+ N LT LP G+F +L +L L + N
Sbjct: 84 FDQLVNLTDLRLHQNQLTSLPPGIFDKLTKLTRLDLDRNQL 124
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 8/101 (7%)
Query: 306 VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR-RLEQNDI 364
VDC K L +P +P T +L +D L S + F + + L+ N +
Sbjct: 24 VDCSYKKLTAMPSNIPADTKKL-------ELDYNKLSSLSAKAFHSLSKLTLLNLQGNKL 76
Query: 365 TELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
LP F L +RL QN +T LPP F +L R+
Sbjct: 77 QTLPAGVFDQLVNLTDLRLHQNQLTSLPPGIFDKLTKLTRL 117
>gi|410920159|ref|XP_003973551.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 1-like [Takifugu rubripes]
Length = 1002
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 67/130 (51%), Gaps = 4/130 (3%)
Query: 129 LRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLT 185
L L+ NDI+ E AF+ L ++ L N+I VA +AF GL+SL L L N +
Sbjct: 355 LELDHNDISGTIEDTNGAFSGLDSLNKLILFGNKIKSVAENAFLGLESLEHLNLGGNAVR 414
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAPSHIKGQNI 244
+ F+++ L++L I +SF+CDC L WL WL R + + C P +KG +I
Sbjct: 415 SIQPDAFSKMKNLKSLLIQSDSFLCDCQLQWLPGWLVSRLLQASVSATCAHPEGLKGTSI 474
Query: 245 LDIPEHEFKC 254
P F C
Sbjct: 475 FQAPPSSFVC 484
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
LRL +N I+++P +AF RL ++L++N+I +V FQGL SL L L N+++ L
Sbjct: 188 LRLSRNRISQIPVRAF-QLPRLTLLELNRNRIRQVEGLTFQGLSSLEVLKLQRNSISKLT 246
Query: 189 DGVFAELFRLRTLRISENSF 208
DG F +L +++ L + N+
Sbjct: 247 DGAFWDLAKMKALHLDYNNL 266
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 4/117 (3%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAPS 63
L N + + F+++ L++L I +SF+CDC L WL WL R + + C P
Sbjct: 408 LGGNAVRSIQPDAFSKMKNLKSLLIQSDSFLCDCQLQWLPGWLVSRLLQASVSATCAHPE 467
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
+KG +I P F C + P + A+P +D + C+ + P+
Sbjct: 468 GLKGTSIFQAPPSSFVCD---DLPKPQIIAQPETTLVVLGSDVRLTCKAVSSSSSPM 521
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 1/112 (0%)
Query: 97 CPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLS 156
C C C+ VDC + L P LP T L L N +T + +A N LR + L
Sbjct: 36 CALNCTCSGDWVDCSSRELTAAPPDLPARTVSLTLSHNKLTTIDVEALDNLPNLRELRLD 95
Query: 157 KNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
N ++ + Q + SL L++N + + A L + TL +S N
Sbjct: 96 HNVLTSIP-HLGQAASKIVSLYLHHNKIRTIEGSRIAPLVSVETLDLSNNDI 146
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L+ N++TE+ + L+++ LS N I+++ D ++ + L L L+ NNLT L
Sbjct: 259 LHLDYNNLTEVNSGSLYGLTSLQQLFLSNNSIARINPDGWKFCQKLRELNLSYNNLTRLD 318
Query: 189 DGVFAELFRLRTLRISENSF 208
+G + L L TLR+ N+
Sbjct: 319 EGSLSVLGDLHTLRLGHNAI 338
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%)
Query: 127 TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTY 186
T L L +N I ++ F L + L +N ISK+ AF L + +L L+ NNLT
Sbjct: 209 TLLELNRNRIRQVEGLTFQGLSSLEVLKLQRNSISKLTDGAFWDLAKMKALHLDYNNLTE 268
Query: 187 LPDGVFAELFRLRTLRISENSF 208
+ G L L+ L +S NS
Sbjct: 269 VNSGSLYGLTSLQQLFLSNNSI 290
>gi|359074357|ref|XP_002694331.2| PREDICTED: leucine-rich repeat-containing G-protein coupled
receptor 6 [Bos taurus]
Length = 1016
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 70/136 (51%), Gaps = 10/136 (7%)
Query: 96 SCPHPCRCAD-GI---VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
CP PCRC + GI VDC E+GL+ VP L T L L N +TEL P F + + L
Sbjct: 76 GCPVPCRCREAGILLWVDCSERGLSTVPAGLDPLTAYLDLSMNSLTELWPGVFHHLRFLE 135
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN--SFI 209
+ LS N+++ + AF GL SL L L NN L +P EL L++LR+ N S +
Sbjct: 136 ELRLSGNRLAHIPGQAFSGLSSLKILMLQNNRLGGIPAEALWELPGLQSLRLDANLISLV 195
Query: 210 CDCHLSWL----HRWL 221
D L H WL
Sbjct: 196 PDRSFEGLTSLRHLWL 211
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 124 EATTELR---LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLN 180
E T LR L+ N +TE+P +A ++ + L+ + L+ N+I +V AF L SL L L+
Sbjct: 201 EGLTSLRHLWLDDNALTEIPVRALSHLRALQAVTLALNRIGRVPDYAFWNLSSLVVLHLH 260
Query: 181 NNNLTYLPDGVFAELFRLRTLRISENSF 208
NN + +L F L L TL ++ N
Sbjct: 261 NNRIRHLGAHSFEGLQNLETLDLNCNQL 288
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 46/114 (40%), Gaps = 34/114 (29%)
Query: 294 SCPHPCRCAD-GI---VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNF 349
CP PCRC + GI VDC E+GL+ VP L T L
Sbjct: 76 GCPVPCRCREAGILLWVDCSERGLSTVPAGLDPLTAYLD--------------------- 114
Query: 350 KRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLR 403
L N +TEL P F + + L +RL N + +P +AF+ L+
Sbjct: 115 ---------LSMNSLTELWPGVFHHLRFLEELRLSGNRLAHIPGQAFSGLSSLK 159
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 35/72 (48%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
E+ L+ N I E+ F LR +DLS N I + +AF L+SL L L N L+ L
Sbjct: 420 EIGLQHNRIWEVRADTFRELTFLRSLDLSWNAIRSIHPEAFSTLRSLVKLDLTGNQLSVL 479
Query: 188 PDGVFAELFRLR 199
P L L+
Sbjct: 480 PLAGLGGLVHLK 491
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 40/102 (39%), Gaps = 23/102 (22%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ------------------ 169
EL N+I +P KAF L+ I N I V AFQ
Sbjct: 303 ELGFHNNNIRAIPEKAFLGNPLLQTIHFYDNPIQFVGRSAFQHLPGLHTLSLNGATDIQE 362
Query: 170 -----GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
G SL SLTL L LP G+ +L RLR L +S N
Sbjct: 363 FPDLRGTTSLESLTLTRAGLQRLPPGMCQQLPRLRVLELSHN 404
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 15/120 (12%)
Query: 100 PCRCADGIVDCR-----EKGLNKVPILLPEATTELRLEQ------NDITELPPKAFANYK 148
P R +G+ R + L ++P+ A + LR Q N I +P AF N
Sbjct: 196 PDRSFEGLTSLRHLWLDDNALTEIPV---RALSHLRALQAVTLALNRIGRVPDYAFWNLS 252
Query: 149 RLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
L + L N+I + +F+GL++L +L LN N L P + L RL+ L N+
Sbjct: 253 SLVVLHLHNNRIRHLGAHSFEGLQNLETLDLNCNQLHEFPVAI-QTLGRLQELGFHNNNI 311
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N I L +F + L +DL+ NQ+ + V A Q L L L +NNN+ +P
Sbjct: 257 LHLHNNRIRHLGAHSFEGLQNLETLDLNCNQLHEFPV-AIQTLGRLQELGFHNNNIRAIP 315
Query: 189 DGVFAELFRLRTLRISEN 206
+ F L+T+ +N
Sbjct: 316 EKAFLGNPLLQTIHFYDN 333
>gi|119928593|dbj|BAF43121.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 173
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 9/169 (5%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC + L VP +P T L L+ N IT+L P F L + L
Sbjct: 11 ACPAQCSCSGTSVDCSARSLASVPAGIPTTTQSLSLQVNQITKLEPGVFDRLGNLEVLGL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
N+++++ F L L L L+ N L +PDG FA L L + + N + C C +
Sbjct: 71 CCNKLTELPSGVFDKLTRLKQLGLDQNQLKSVPDGAFARLSSLTHVWLHTNPWDCQCTDI 130
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L W+ ++ + H G + P+ KCSG++ R+
Sbjct: 131 LYLSGWVAQHSGI-------VREHWDGSSWTVNPD-SVKCSGTNTPVRA 171
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C+ VDC + L VP +P T L+ V+ I +++ + F R
Sbjct: 11 ACPAQCSCSGTSVDCSARSLASVPAGIPTTTQSLSLQVNQITKLEPGV--------FDRL 62
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N L N +TELP F RL+++ L+QN + +P AFA L +
Sbjct: 63 GNLEVLGLCCNKLTELPSGVFDKLTRLKQLGLDQNQLKSVPDGAFARLSSLTHV 116
>gi|62659353|ref|XP_573455.1| PREDICTED: leucine-rich repeat-containing G-protein coupled
receptor 6-like [Rattus norvegicus]
gi|109498666|ref|XP_001062538.1| PREDICTED: leucine-rich repeat-containing G-protein coupled
receptor 6-like [Rattus norvegicus]
Length = 965
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Query: 95 PSCPHPCRCA-DGIV---DCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRL 150
P+CP PC C DGI+ DC E GL++VP L T L L N++TEL P F + + L
Sbjct: 33 PACPAPCHCQEDGIMLSADCSELGLSEVPADLDPLTAYLDLSMNNLTELQPGLFHHLRFL 92
Query: 151 RRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
+ LS N +S + AF GL SL L L +N L +P EL L++LR+ N
Sbjct: 93 EELRLSGNHLSHIPRQAFSGLHSLKILMLQSNQLRGIPAEALWELPSLQSLRLDAN 148
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 111/289 (38%), Gaps = 40/289 (13%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L+ N +TE+P +A N L+ + L+ N+I + AFQ L SL L L+NN + ++
Sbjct: 167 LWLDDNALTEIPVRALNNLPALQAMTLALNRIRHIPDYAFQNLTSLVVLHLHNNRIQHVG 226
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIP 248
F L L TL ++ N R L R LG + NI IP
Sbjct: 227 THSFEGLHNLETLDLNYNEL---QEFPVAIRTLGRLQELGFHNN----------NIKAIP 273
Query: 249 EHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDC 308
E F G+ + Y P++ G A + +G D
Sbjct: 274 EKAFM--GNPLLQTIHFYDN------------PIQF-VGRSAFQYLSKLHTLSLNGATDI 318
Query: 309 RE----KGLNKVPIL-LPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR------ 357
+E KG + IL L A L ++ ++ + N + + R
Sbjct: 319 QEFPDLKGTTSLEILTLTRAGIRLLPAGMCQQLPRLRILELSHNQIEELPSLHRCQKLEE 378
Query: 358 -RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L+ N I E+ F+ L+ + L N I + P+AF+ + L ++
Sbjct: 379 IGLQHNRIWEIGADTFSQLSSLQALDLSWNAIRAIHPEAFSTLRSLVKL 427
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 85/216 (39%), Gaps = 31/216 (14%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISEN--SFICDCHLSWLHRW---------LKRYPRL 53
L+ NNLT L G+F L L LR+S N S I S LH L+ P
Sbjct: 73 LSMNNLTELQPGLFHHLRFLEELRLSGNHLSHIPRQAFSGLHSLKILMLQSNQLRGIPAE 132
Query: 54 GLYTKCFAPSHIKGQNILD-IPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCRE 112
L+ S N++ +PE F+ S H + + +
Sbjct: 133 ALWELPSLQSLRLDANLISLVPERSFE-------------GLSSLRHLWLDDNALTEIPV 179
Query: 113 KGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLK 172
+ LN +P A + L N I +P AF N L + L N+I V +F+GL
Sbjct: 180 RALNNLP-----ALQAMTLALNRIRHIPDYAFQNLTSLVVLHLHNNRIQHVGTHSFEGLH 234
Query: 173 SLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+L +L LN N L P + L RL+ L N+
Sbjct: 235 NLETLDLNYNELQEFPVAI-RTLGRLQELGFHNNNI 269
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 34/117 (29%)
Query: 293 PSCPHPCRCA-DGIV---DCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNN 348
P+CP PC C DGI+ DC E GL++VP D L +Y+
Sbjct: 33 PACPAPCHCQEDGIMLSADCSELGLSEVP------------------ADLDPLTAYLD-- 72
Query: 349 FKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N++TEL P F + + L +RL N ++ +P +AF+ L+ +
Sbjct: 73 ----------LSMNNLTELQPGLFHHLRFLEELRLSGNHLSHIPRQAFSGLHSLKIL 119
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
E+ L+ N I E+ F+ L+ +DLS N I + +AF L+SL L L +N LT L
Sbjct: 378 EIGLQHNRIWEIGADTFSQLSSLQALDLSWNAIRAIHPEAFSTLRSLVKLDLTDNQLTTL 437
Query: 188 PDGVFAELFRLR 199
P L L+
Sbjct: 438 PLAGLGGLMHLK 449
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 8/167 (4%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N I ELP + ++L I L N+I ++ D F L SL +L L+ N + +
Sbjct: 357 LELSHNQIEELP--SLHRCQKLEEIGLQHNRIWEIGADTFSQLSSLQALDLSWNAIRAIH 414
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLHRW--LKRYPRLGLYTKCFAPSHIKGQNILD 246
F+ L L L +++N + L+ L LK L L ++ F+ IL+
Sbjct: 415 PEAFSTLRSLVKLDLTDNQ-LTTLPLAGLGGLMHLKLKGNLAL-SQAFSKDSFPKLRILE 472
Query: 247 IPEHEFKCSGSSM-ETRSKIYREECSTDFHPYNSCPVEKPTGECAAE 292
+P + ++C + K + + DFH ++P G A +
Sbjct: 473 VP-YAYQCCAYGLCANFFKTSGQWQAEDFHAEEEEAPKRPLGLLAGQ 518
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 39/104 (37%), Gaps = 23/104 (22%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ------------------ 169
EL N+I +P KAF L+ I N I V AFQ
Sbjct: 261 ELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQFVGRSAFQYLSKLHTLSLNGATDIQE 320
Query: 170 -----GLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
G SL LTL + LP G+ +L RLR L +S N
Sbjct: 321 FPDLKGTTSLEILTLTRAGIRLLPAGMCQQLPRLRILELSHNQI 364
>gi|449475986|ref|XP_004175013.1| PREDICTED: LOW QUALITY PROTEIN: polycystin-1 [Taeniopygia guttata]
Length = 4134
Score = 81.3 bits (199), Expect = 8e-13, Method: Composition-based stats.
Identities = 49/148 (33%), Positives = 73/148 (49%), Gaps = 15/148 (10%)
Query: 139 LPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRL 198
+PP A A +DLS N+IS + + F+ L SL L L++N ++ DG+F LF L
Sbjct: 53 VPPAATA-------LDLSNNRISGLDAELFRSLPSLAKLVLSHNQISTXEDGIFDNLFNL 105
Query: 199 RTLRISENSFICDCHLSWLHRWL-KRYPRL--GLYTKCFAPSHIKGQNILDIPEHEFKCS 255
+ +S N F+CDC LSWL RW+ +R R+ T+C P + ++ D+ C
Sbjct: 106 SEINLSWNPFVCDCKLSWLPRWVEERKVRVLEASDTRCAHPPEVANLSLFDVLFLNATCG 165
Query: 256 GSSMETRSKIYREECS-----TDFHPYN 278
+ + Y EE T HP N
Sbjct: 166 AQYITCLTGNYTEEAELIILFTSVHPGN 193
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRL--GLYTKCFA 61
L++N ++ DG+F LF L + +S N F+CDC LSWL RW+ +R R+ T+C
Sbjct: 86 LSHNQISTXEDGIFDNLFNLSEINLSWNPFVCDCKLSWLPRWVEERKVRVLEASDTRCAH 145
Query: 62 PSHIKGQNILDI 73
P + ++ D+
Sbjct: 146 PPEVANLSLFDV 157
>gi|76162069|gb|ABA40118.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 168
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 68/133 (51%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C+ K L VP +P T L L N IT+L P F + +L + L
Sbjct: 1 ACPSQCSCSGTTVNCKSKSLASVPAGIPTTTQVLYLYTNKITKLEPGVFDSLTQLTTLYL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
S NQ++ + F+ L L L L N+ L +P G F L L + +S N + C+C +
Sbjct: 61 SNNQLTALPAGVFERLVKLQVLGLYNSQLKSIPRGAFDNLKSLTNIWLSSNPWDCECSDI 120
Query: 215 SWLHRWLKRYPRL 227
+L W+ ++ +
Sbjct: 121 LYLKNWIVQHASI 133
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C+ K L VP +P TT++ Y+ + +++ K L + ++ + T
Sbjct: 1 ACPSQCSCSGTTVNCKSKSLASVPAGIP-TTTQVLYLYT-NKITK--LEPGVFDSLTQLT 56
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L N +T LP F +L+ + L + + +P AF N K L +
Sbjct: 57 --TLYLSNNQLTALPAGVFERLVKLQVLGLYNSQLKSIPRGAFDNLKSLTNI 106
>gi|27545414|ref|NP_775450.1| leucine-rich repeat-containing G-protein coupled receptor 4
precursor [Rattus norvegicus]
gi|21542113|sp|Q9Z2H4.1|LGR4_RAT RecName: Full=Leucine-rich repeat-containing G-protein coupled
receptor 4; AltName: Full=G-protein coupled receptor 48;
Flags: Precursor
gi|3885470|gb|AAC77910.1| G protein-coupled receptor LGR4 [Rattus norvegicus]
Length = 951
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 87 PTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFA 145
P+G AA P C PC C D VDC KGL VP L T L + N+IT+LP AF
Sbjct: 21 PSG--AAPPLCAAPCSCDGDRRVDCSGKGLTAVPEGLSAFTQALDISMNNITQLPEDAFK 78
Query: 146 NYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISE 205
++ L + L+ N +S + A GLK L LTL NN L +P L L++LR+
Sbjct: 79 SFPFLEELQLAGNDLSLIHPKALSGLKELKVLTLQNNQLRTVPSEAIHGLSALQSLRLDA 138
Query: 206 N 206
N
Sbjct: 139 N 139
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 67/150 (44%), Gaps = 10/150 (6%)
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADG-----IVDCREKGLNKVP 119
I NI +PE FK S P + + S HP + G ++ + L VP
Sbjct: 64 ISMNNITQLPEDAFK-SFPFLEELQLAGNDLSLIHP-KALSGLKELKVLTLQNNQLRTVP 121
Query: 120 ---ILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
I A LRL+ N IT +P +F +LR + L N +++V V L +L +
Sbjct: 122 SEAIHGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVRPLSNLPTLQA 181
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
LTL NN++ +PD F L L L + N
Sbjct: 182 LTLALNNISSIPDFAFTNLSSLVVLHLHNN 211
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 9/122 (7%)
Query: 285 PTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYS 343
P+G AA P C PC C D VDC KGL VP L T L +S++ + ++ +
Sbjct: 21 PSG--AAPPLCAAPCSCDGDRRVDCSGKGLTAVPEGLSAFTQALD--ISMNNITQLPEDA 76
Query: 344 YISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLR 403
+ S F +L ND++ + PKA + K L+ + L+ N + +P +A L+
Sbjct: 77 FKSFPFLE----ELQLAGNDLSLIHPKALSGLKELKVLTLQNNQLRTVPSEAIHGLSALQ 132
Query: 404 RM 405
+
Sbjct: 133 SL 134
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N+I +LP +F + L I L +NQIS + + FQGL SL L L+ N + +
Sbjct: 348 LDLSYNNIRDLP--SFNGCRALEEISLQRNQISLIKENTFQGLTSLRILDLSRNLIREIH 405
Query: 189 DGVFAELFRLRTLRISEN 206
G FA+L + L +S N
Sbjct: 406 SGAFAKLGTITNLDVSFN 423
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 109/267 (40%), Gaps = 66/267 (24%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
++ NN+T LP+ F L L+++ N LS +H P+ A S
Sbjct: 64 ISMNNITQLPEDAFKSFPFLEELQLAGND------LSLIH------PK--------ALSG 103
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECA-------AEPSCPHPCRCADGIVDCR-----E 112
+K +L + ++ + + P E G A A P +G+V R +
Sbjct: 104 LKELKVLTLQNNQLR-TVPSEAIHGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDD 162
Query: 113 KGLNKVPIL----LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAF 168
L +VP+ LP L L N+I+ +P AF N L + L N+I ++ F
Sbjct: 163 NSLTEVPVRPLSNLP-TLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCF 221
Query: 169 QGLKSLTSLTLN-----------------------NNNLTYLPDGVFAELFRLRTLRISE 205
GL +L +L LN +N+++ +PDG F LRT+ + +
Sbjct: 222 DGLDNLETLDLNYNYLDEFPQAIKALPSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYD 281
Query: 206 N--SFICDC---HLSWLHRWLKRYPRL 227
N SF+ + +LS LH + R L
Sbjct: 282 NPLSFVGNSAFHNLSDLHCLVIRGASL 308
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL 184
A E+ L++N I+ + F LR +DLS+N I ++ AF L ++T+L ++ N L
Sbjct: 366 ALEEISLQRNQISLIKENTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSFNEL 425
Query: 185 TYLP 188
T P
Sbjct: 426 TSFP 429
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 85/233 (36%), Gaps = 46/233 (19%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N++T +P+ F L +LR L + +NS R L P L T
Sbjct: 136 LDANHITSVPEDSFEGLVQLRHLWLDDNSLT-----EVPVRPLSNLPTLQALT------- 183
Query: 65 IKGQNILDIPEHEF-KCSGPVEKPTGECAAEPSCPHPCRCADGI-----VDCREKGLNKV 118
+ NI IP+ F S V + H C DG+ +D L++
Sbjct: 184 LALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQH---CFDGLDNLETLDLNYNYLDEF 240
Query: 119 PILLPE--ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSL-- 174
P + + EL N I+ +P AF LR I L N +S V AF L L
Sbjct: 241 PQAIKALPSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHC 300
Query: 175 ---------------------TSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
SLTL ++ +PD + LRTL +S N
Sbjct: 301 LVIRGASLVQWFPNLTGTVHLESLTLTGTKISSIPDDLCQNQKMLRTLDLSYN 353
>gi|62208233|gb|AAX77060.1| variable lymphocyte receptor [Lampetra appendix]
Length = 289
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 80/175 (45%), Gaps = 7/175 (4%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC + L VP +P T L L N IT+L P F + L+++ +
Sbjct: 21 ACPSQCSCSGTTVDCNSRSLASVPAGIPTTTQRLWLNSNQITKLEPGVFDSLVNLQQLYV 80
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF------I 209
S+NQ+ + F L +L L L NN L+ LP GVF +L +L LR+ N
Sbjct: 81 SENQLRALPTGLFDRLANLQQLRLQNNQLSALPVGVFDKLTQLTYLRLHVNQLKSIPRGA 140
Query: 210 CDCHLSWLHRWLKRYP-RLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
D S H WL P + +K + I + KCSG++ R+
Sbjct: 141 FDNLKSLTHIWLYNNPWDCACSDILYLSLWLKQNSGKAISIGDIKCSGTNTPVRA 195
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 22/132 (16%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKV----------LLYS 343
+CP C C+ VDC + L VP +P T L ++ +++ K+ L
Sbjct: 21 ACPSQCSCSGTTVDCNSRSLASVPAGIPTTTQRL--WLNSNQITKLEPGVFDSLVNLQQL 78
Query: 344 YISNN---------FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPP 393
Y+S N F R N + RL+ N ++ LP F +L +RL N + +P
Sbjct: 79 YVSENQLRALPTGLFDRLANLQQLRLQNNQLSALPVGVFDKLTQLTYLRLHVNQLKSIPR 138
Query: 394 KAFANYKRLRRM 405
AF N K L +
Sbjct: 139 GAFDNLKSLTHI 150
>gi|76162416|gb|ABA40271.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 171
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 11/169 (6%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C E+ L VP +P T L L N IT+L P F + +L ++L
Sbjct: 1 ACPSQCSCSGTQVNCHERSLASVPAGIPTTTQVLYLYTNQITKLEPGVFDSLTQLTYLNL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
+ NQ++ + V F L LT L+L N L +P G F L L + + N + C+C +
Sbjct: 61 AVNQLTALPVGVFDKLTKLTHLSLGYNQLKSIPRGAFDNLKSLTHIFLYNNPWDCECRDI 120
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L W+ + + + G+ + D P+ KC+G++ R+
Sbjct: 121 MYLRNWVADHTSIVM--------RWDGKAVND-PDSA-KCAGTNTPVRA 159
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C E+ L VP +P TT++ Y+ + +++ K+ + S +
Sbjct: 1 ACPSQCSCSGTQVNCHERSLASVPAGIP-TTTQVLYLYT-NQITKLEPGVFDSLTQLTYL 58
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N L N +T LP F +L + L N + +P AF N K L +
Sbjct: 59 N----LAVNQLTALPVGVFDKLTKLTHLSLGYNQLKSIPRGAFDNLKSLTHI 106
>gi|410951541|ref|XP_003982454.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 1 [Felis catus]
Length = 1033
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 65/130 (50%), Gaps = 4/130 (3%)
Query: 129 LRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLT 185
L L+ N+I+ E AF L ++ L N+I VA AF GL+ L L L N +
Sbjct: 291 LDLDHNEISGTIEDTSGAFTGLDSLSKLTLFGNKIKSVAKRAFSGLEGLEHLNLGENAVR 350
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW-LKRYPRLGLYTKCFAPSHIKGQNI 244
+ F ++ L+ L IS +SF+CDC L WL W L R + + C P +KGQ+I
Sbjct: 351 SVQSDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLLGRMLQPFVTATCAHPESLKGQSI 410
Query: 245 LDIPEHEFKC 254
+P F C
Sbjct: 411 FSVPPESFVC 420
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
LRL +N IT+LP KAF RL ++DL++N+I + FQGL+SL L L NN++ L
Sbjct: 124 LRLSKNRITQLPVKAF-KLPRLTQLDLNRNRIRLIEGLTFQGLESLEVLKLQRNNISKLT 182
Query: 189 DGVFAELFRLRTLRISENSFI 209
DG F L R+ L + NS +
Sbjct: 183 DGAFWGLSRIHVLHLESNSLV 203
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW-LKRYPRLGLYTKCFAPS 63
L N + + F ++ L+ L IS +SF+CDC L WL W L R + + C P
Sbjct: 344 LGENAVRSVQSDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLLGRMLQPFVTATCAHPE 403
Query: 64 HIKGQNILDIPEHEFKC 80
+KGQ+I +P F C
Sbjct: 404 SLKGQSIFSVPPESFVC 420
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGL-KSLTSLTLNNNNLTYL 187
L L N+ITE+ F +R ++L+ N+I + AF GL +SL L L+ N +T L
Sbjct: 75 LDLSSNNITEIRSACFPQGLHIRELNLASNRIGSLESGAFDGLSRSLVMLRLSKNRITQL 134
Query: 188 PDGVFAELFRLRTLRISEN 206
P F +L RL L ++ N
Sbjct: 135 PVKAF-KLPRLTQLDLNRN 152
>gi|76161970|gb|ABA40074.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 218
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 63/132 (47%), Gaps = 6/132 (4%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC + L VP +P T L L N IT+L P F LR + L
Sbjct: 1 ACPSQCSCSGKTVDCYSRSLASVPAGIPTTTQVLGLSSNQITKLEPGVFDRLANLRELHL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLS 215
NQ+ + F L LT L L NN LT LP GVF L L+ L F+C L+
Sbjct: 61 WGNQLVSLPPGVFDRLTQLTRLDLYNNQLTVLPAGVFDRLVHLKEL------FMCCNKLT 114
Query: 216 WLHRWLKRYPRL 227
L R ++R L
Sbjct: 115 ELPRGIERLTHL 126
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ VDC + L VP +P T L +S +++ K+ F R
Sbjct: 1 ACPSQCSCSGKTVDCYSRSLASVPAGIPTTTQVLG--LSSNQITKL-----EPGVFDRLA 53
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R L N + LPP F +L R+ L N +T LP F L+ +
Sbjct: 54 NLRELHLWGNQLVSLPPGVFDRLTQLTRLDLYNNQLTVLPAGVFDRLVHLKEL 106
>gi|76162352|gb|ABA40244.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 168
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ + C K L VP +P T L L+ N IT+L P F +L R+DL
Sbjct: 1 ACPSQCSCSGTELHCAGKSLASVPAGIPTTTHYLDLDSNQITKLEPGVFDRLTQLTRLDL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ++ + F L LT L L N LT + G F L +L+ + + N + C+C +
Sbjct: 61 YNNQLTVLPAGVFDKLTQLTHLNLERNQLTTVLKGTFDSLTKLQYIYLYSNPWDCECSDI 120
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L W+ ++ + + G +D KCSG++ R+
Sbjct: 121 LYLKNWIVQHASI---------VNPDGHGGVD----NVKCSGTNTPVRA 156
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 47/113 (41%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ + C K L VP +P T L +D + F R T
Sbjct: 1 ACPSQCSCSGTELHCAGKSLASVPAGIPTTTHYL-------DLDSNQITKLEPGVFDRLT 53
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+R L N +T LP F +L + LE+N +T + F + +L+ +
Sbjct: 54 QLTRLDLYNNQLTVLPAGVFDKLTQLTHLNLERNQLTTVLKGTFDSLTKLQYI 106
>gi|194752045|ref|XP_001958333.1| GF23572 [Drosophila ananassae]
gi|190625615|gb|EDV41139.1| GF23572 [Drosophila ananassae]
Length = 454
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 63/117 (53%), Gaps = 2/117 (1%)
Query: 94 EPSCPHPCRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLR 151
EPSCP C C + V C L VP+ +P+ + L N I+EL P+ FAN R++
Sbjct: 93 EPSCPRNCHCLEDFKYVQCTNAHLTHVPLDMPKTAAIIDLSHNVISELRPEDFANLSRVQ 152
Query: 152 RIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
I+L+ N IS++ + FQGL+ L L L NN LT + FA L L +S NS
Sbjct: 153 EINLNHNLISRIDTEVFQGLERLQRLRLANNRLTKIDPDTFAPARELSILDLSNNSI 209
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 47/116 (40%), Gaps = 32/116 (27%)
Query: 292 EPSCPHPCRCADGI--VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNF 349
EPSCP C C + V C L VP+ +P+ ID
Sbjct: 93 EPSCPRNCHCLEDFKYVQCTNAHLTHVPLDMPKTA------AIID--------------- 131
Query: 350 KRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N I+EL P+ FAN R++ I L N I+ + + F +RL+R+
Sbjct: 132 ---------LSHNVISELRPEDFANLSRVQEINLNHNLISRIDTEVFQGLERLQRL 178
>gi|417405631|gb|JAA49523.1| Putative membrane glycoprotein lig-1 [Desmodus rotundus]
Length = 1027
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 65/130 (50%), Gaps = 4/130 (3%)
Query: 129 LRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLT 185
L L+ N+I+ E AF L ++ L N+I VA AF GL+ L L L N +
Sbjct: 340 LDLDHNEISGTIEDTSGAFMGLDSLSKLTLFGNKIKSVAKRAFSGLEGLEHLNLGENAIR 399
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW-LKRYPRLGLYTKCFAPSHIKGQNI 244
+ F ++ L+ L IS +SF+CDC L WL W L R + + C P +KGQ+I
Sbjct: 400 SVQFDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLLGRMLQAFVTATCAHPESLKGQSI 459
Query: 245 LDIPEHEFKC 254
+P F C
Sbjct: 460 FSVPPESFVC 469
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 133 QNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
+N IT+LP KAF RL ++DL++N+I + FQGL SL L L NN++ L DG F
Sbjct: 177 KNRITQLPVKAF-KLPRLTQLDLNRNRIRLIEGLTFQGLDSLEVLKLQRNNISKLTDGAF 235
Query: 193 AELFRLRTLRISENSFI 209
L R+ L + NS +
Sbjct: 236 WGLSRMHVLHLEYNSLV 252
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW-LKRYPRLGLYTKCFAPS 63
L N + + F ++ L+ L IS +SF+CDC L WL W L R + + C P
Sbjct: 393 LGENAIRSVQFDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLLGRMLQAFVTATCAHPE 452
Query: 64 HIKGQNILDIPEHEFKC 80
+KGQ+I +P F C
Sbjct: 453 SLKGQSIFSVPPESFVC 469
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 3/125 (2%)
Query: 85 EKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAF 144
E T C C CA +DC +GL +P LP T L L N ++E+ P F
Sbjct: 9 EPATATAGPRVPCAAACTCAGDSLDCGGRGLAALPQDLPAWTRSLNLSYNKLSEIDPSGF 68
Query: 145 ANYKRLRRIDLSKNQISKVAVDAFQGLKS-LTSLTLNNNNLTYLPDGVFAELFRLRTLRI 203
+ L+ + L+ N+++ A+ + S + SL L +N + + L L +
Sbjct: 69 EDLPNLQEVYLNNNELT--AIPSLGDASSHIVSLFLQHNKIRSVEGSRLKAYLSLEVLDL 126
Query: 204 SENSF 208
S N+
Sbjct: 127 SWNNI 131
>gi|384941994|gb|AFI34602.1| carboxypeptidase N subunit 2 [Macaca mulatta]
Length = 545
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 113/258 (43%), Gaps = 20/258 (7%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTL-----RISENSFICDCHLSWLHR-WLKRYPRLGLYTK 58
L+NN L+ LP GVFA L L+ L +ISE L L R WL+ L
Sbjct: 200 LSNNALSSLPQGVFARLASLQELFLDSNKISELPPRVFSQLFRLERLWLQHNAITHLPLS 259
Query: 59 CFAPSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKV 118
FA + L + + + P G A P + + E +
Sbjct: 260 IFA--SLGNLTFLSLQGNMLRV-----LPAGLFAHTPHLVGLSLTHNQLETLAEGAFAHL 312
Query: 119 PILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLT 178
L L L N I LP F + + L ++ LS N ++ + FQ L L L+
Sbjct: 313 SNL-----RSLMLSYNAIAHLPAGIFRDLEELVKLYLSGNNLTALHPALFQNLSKLELLS 367
Query: 179 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPR--LGLYTKCFAP 236
L+ N LT LP+G+F + L L + N + CDCHL++L WL++Y L + T C P
Sbjct: 368 LSKNQLTTLPEGIFDTNYNLFNLALHGNPWQCDCHLAYLFNWLQQYTDRLLNIQTYCAGP 427
Query: 237 SHIKGQNILDIPEHEFKC 254
+++KGQ + + E + C
Sbjct: 428 AYLKGQVVPALNEKQLVC 445
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAP- 62
TLN N L L +G+F ++ L +L + N L+ PR + F P
Sbjct: 127 TLNFNMLEALLEGLFQDMAALESLHLQGNR-------------LQALPR-----RLFQPL 168
Query: 63 SHIK----GQNIL-DIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNK 117
+H+K QN+L +PE F ++ A S P V R L
Sbjct: 169 THLKTLNLAQNLLAQLPEELFHPLTSLQTLKLSNNALSSLPQG-------VFARLASLQ- 220
Query: 118 VPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSL 177
EL L+ N I+ELPP+ F+ RL R+ L N I+ + + F L +LT L
Sbjct: 221 ----------ELFLDSNKISELPPRVFSQLFRLERLWLQHNAITHLPLSIFASLGNLTFL 270
Query: 178 TLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+L N L LP G+FA L L ++ N
Sbjct: 271 SLQGNMLRVLPAGLFAHTPHLVGLSLTHNQL 301
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 120/316 (37%), Gaps = 19/316 (6%)
Query: 93 AEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRR 152
A+P CP C C V C ++ L +P +P TT + + T + +AF + L +
Sbjct: 19 AQP-CPVGCDCFVREVFCSDEELAAIPPDIPPHTTNIVFVETSFTTVETRAFGSNPNLTK 77
Query: 153 IDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC 212
+ Q+ + DAF GL L L + ++ L F+ L L L ++ N + +
Sbjct: 78 VVFLNTQLCQFRPDAFGGLPRLEDLEITGSSFLNLSANTFSNLTSLGKLTLNFN--MLEA 135
Query: 213 HLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFK--CSGSSMETRSKIYREEC 270
L L + + L H++G + +P F+ ++ + +
Sbjct: 136 LLEGLFQDMAALESL----------HLQGNRLQALPRRLFQPLTHLKTLNLAQNLLAQLP 185
Query: 271 STDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYM 330
FHP S K + A S P + NK+ L P ++L +
Sbjct: 186 EELFHPLTSLQTLKLSNN--ALSSLPQGVFARLASLQELFLDSNKISELPPRVFSQLFRL 243
Query: 331 VSIDRVDKVLLYSYISNNFKRWTNRS-RRLEQNDITELPPKAFANYKRLRRIRLEQNDIT 389
+ + + +S F N + L+ N + LP FA+ L + L N +
Sbjct: 244 ERLWLQHNAITHLPLS-IFASLGNLTFLSLQGNMLRVLPAGLFAHTPHLVGLSLTHNQLE 302
Query: 390 ELPPKAFANYKRLRRM 405
L AFA+ LR +
Sbjct: 303 TLAEGAFAHLSNLRSL 318
>gi|50086899|gb|AAT70330.1| variable lymphocyte receptor [Petromyzon marinus]
Length = 270
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 75/169 (44%), Gaps = 14/169 (8%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C V C + L VP +P L L N IT+L P F LR + L
Sbjct: 21 ACPSQCSCDQTPVYCHSRRLTSVPAGIPTDRQNLWLNNNQITKLEPGVFNGLANLRELHL 80
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ+ + F L LT L L+NN L +P G F L +L+ + + N + C C +
Sbjct: 81 WGNQLVSLPPGVFDRLTQLTHLGLHNNQLKSIPRGAFDSLTKLQYIYLYSNPWDCACSDI 140
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L RW+ ++P L L++ +CSG++ R+
Sbjct: 141 LYLSRWISQHPGLVF-------------GYLNLDPDSARCSGTNTPVRA 176
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 57/147 (38%), Gaps = 27/147 (18%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-LSWLHRWLKRYPRLGLYTKCFAPS 63
L+NN L +P G F L +L+ + + N + C C + +L RW+ ++P L
Sbjct: 104 LHNNQLKSIPRGAFDSLTKLQYIYLYSNPWDCACSDILYLSRWISQHPGLVF-------- 155
Query: 64 HIKGQNILDIPEHEFKCSG---PVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
L++ +CSG PV T + CP G V P
Sbjct: 156 -----GYLNLDPDSARCSGTNTPVRAVTEASTSPSKCP-------GYVATTTTPTTTTPE 203
Query: 121 LLPEATTELRLEQNDITELPPKAFANY 147
+PE TT Q IT PK N+
Sbjct: 204 FIPETTTS---PQPVITTQKPKPLWNF 227
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C V C + L VP +P T ++ +++ K L + N
Sbjct: 21 ACPSQCSCDQTPVYCHSRRLTSVPAGIP--TDRQNLWLNNNQITK--LEPGVFNGLANL- 75
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R L N + LPP F +L + L N + +P AF + +L+ +
Sbjct: 76 -RELHLWGNQLVSLPPGVFDRLTQLTHLGLHNNQLKSIPRGAFDSLTKLQYI 126
>gi|76162322|gb|ABA40230.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 168
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 14/169 (8%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDCR K + VP +P L L N IT+L P F +L + L
Sbjct: 1 ACPSQCSCDQTTVDCRNKRFSSVPAGIPTDRQNLWLNNNQITKLEPGVFDRLTQLATLYL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
S NQ+S + F L LT L L+ N L +P G F L L + + N + C+C +
Sbjct: 61 SNNQLSALPAGVFDKLPKLTHLVLHTNQLKSIPRGAFDNLKSLTHIWLYGNPWDCECSDI 120
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L W+ ++ + P + G + KCSG++ R+
Sbjct: 121 LYLKNWIVQHASI------VNPGNYGGVD-------NVKCSGTNTPVRA 156
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C VDCR K + VP +P T ++ +++ K+ F R T
Sbjct: 1 ACPSQCSCDQTTVDCRNKRFSSVPAGIP--TDRQNLWLNNNQITKLE-----PGVFDRLT 53
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L N ++ LP F +L + L N + +P AF N K L +
Sbjct: 54 QLATLYLSNNQLSALPAGVFDKLPKLTHLVLHTNQLKSIPRGAFDNLKSLTHI 106
>gi|157676699|emb|CAP07984.1| unnamed protein product [Danio rerio]
Length = 208
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 79/143 (55%), Gaps = 9/143 (6%)
Query: 91 CAAEPS--CPHPCRCAD----GIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAF 144
C + PS CP C C++ +V C + L ++P LP T L+L N IT++P +AF
Sbjct: 31 CLSVPSFACPKSCHCSERNSLTVVQCSSRNLEEIPPDLPHDTVSLQLSSNHITKIPNQAF 90
Query: 145 ANYKRLRRIDLSKNQISKVAVDAFQGL-KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRI 203
N L+ +DLS+N I V AF+G+ +SL +L L++N++ +P FA L + +
Sbjct: 91 KNLPWLQELDLSRNAIETVDAGAFKGVSESLRTLDLSHNHMQGVPKEAFARLH--AKISL 148
Query: 204 SENSFICDCHLSWLHRWLKRYPR 226
S N + C+C L + R L+ P
Sbjct: 149 SNNPWHCECTLQEVLRELRLDPE 171
>gi|410907341|ref|XP_003967150.1| PREDICTED: leucine-rich repeat-containing protein 4-like [Takifugu
rubripes]
Length = 664
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 2/131 (1%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL + +N EL P AF K LR++ + + I+ + +AF + +L L L +NNL+ L
Sbjct: 222 ELEISENVFPELKPGAFRGLKNLRKLWIMNSVITTIERNAFDDITALVELNLAHNNLSSL 281
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAPSHIKGQNIL 245
P +F L L L + N + CDC + WL WL+ Y +C P H++G+ ++
Sbjct: 282 PHNLFTPLQYLVELHLHHNPWRCDCDVVWLAWWLREYIPTNSTCCGRCHTPIHMRGRFLV 341
Query: 246 DIPEHEFKCSG 256
++ + F+CS
Sbjct: 342 EVDQTTFQCSA 352
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 61/122 (50%), Gaps = 2/122 (1%)
Query: 87 PTGECAAEPSCPHPCRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAF 144
P +CP C C + + V C +GLN+VP +P T L L +N I + F
Sbjct: 36 PASGSVNPQNCPAVCSCTNQVSKVVCTRRGLNRVPPNIPNNTRYLNLMENSIETIQADTF 95
Query: 145 ANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRIS 204
+ L + L +N I ++ V AF GL SL +L L +N LT +P G F + +LR L +
Sbjct: 96 RHLHHLEVLQLGRNVIRQIEVGAFNGLTSLNTLELFDNRLTVIPSGAFESMSKLRELWLR 155
Query: 205 EN 206
N
Sbjct: 156 NN 157
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLY--TKCFAP 62
L +NNL+ LP +F L L L + N + CDC + WL WL+ Y +C P
Sbjct: 273 LAHNNLSSLPHNLFTPLQYLVELHLHHNPWRCDCDVVWLAWWLREYIPTNSTCCGRCHTP 332
Query: 63 SHIKGQNILDIPEHEFKCSGP--VEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
H++G+ ++++ + F+CS P ++ P + R A+ + CR ++ V
Sbjct: 333 IHMRGRFLVEVDQTTFQCSAPFILDAPRDLNISA------ARVAE--LKCRTAAMSSVRW 384
Query: 121 LLPEATT 127
LLP T
Sbjct: 385 LLPNGTV 391
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 12/130 (9%)
Query: 280 CPVEKPTGECAAEPSCPHPCRCADGI--VDCREKGLNKVPILLPEATTELTYMV-SIDRV 336
C P +CP C C + + V C +GLN+VP +P T L M SI+ +
Sbjct: 31 CQSLGPASGSVNPQNCPAVCSCTNQVSKVVCTRRGLNRVPPNIPNNTRYLNLMENSIETI 90
Query: 337 DKVLLYSYISNNFKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKA 395
++ F+ + +L +N I ++ AF L + L N +T +P A
Sbjct: 91 Q--------ADTFRHLHHLEVLQLGRNVIRQIEVGAFNGLTSLNTLELFDNRLTVIPSGA 142
Query: 396 FANYKRLRRM 405
F + +LR +
Sbjct: 143 FESMSKLREL 152
>gi|76161627|gb|ABA39910.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 172
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 65/133 (48%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C K VP +P T L L N IT+L P F L+++ L
Sbjct: 1 ACPSQCSCSGTDVNCDGKRFASVPAAIPITTQRLWLSNNQITKLEPGVFDRLVNLQQLYL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ+S + F L L L LNNN L +P G F L L + + N + C C +
Sbjct: 61 GGNQLSALPDGVFDKLTQLNHLFLNNNQLKSIPRGAFDNLKSLTHIYLYNNPWDCACSDI 120
Query: 215 SWLHRWLKRYPRL 227
+L RW+ ++P +
Sbjct: 121 LYLSRWISQHPGI 133
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C K VP +P T L +S +++ K+ F R
Sbjct: 1 ACPSQCSCSGTDVNCDGKRFASVPAAIPITTQRL--WLSNNQITKLE-----PGVFDRLV 53
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N + L N ++ LP F +L + L N + +P AF N K L +
Sbjct: 54 NLQQLYLGGNQLSALPDGVFDKLTQLNHLFLNNNQLKSIPRGAFDNLKSLTHI 106
>gi|417405793|gb|JAA49596.1| Putative membrane glycoprotein lig-1 [Desmodus rotundus]
Length = 1081
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 65/130 (50%), Gaps = 4/130 (3%)
Query: 129 LRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLT 185
L L+ N+I+ E AF L ++ L N+I VA AF GL+ L L L N +
Sbjct: 340 LDLDHNEISGTIEDTSGAFMGLDSLSKLTLFGNKIKSVAKRAFSGLEGLEHLNLGENAIR 399
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW-LKRYPRLGLYTKCFAPSHIKGQNI 244
+ F ++ L+ L IS +SF+CDC L WL W L R + + C P +KGQ+I
Sbjct: 400 SVQFDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLLGRMLQAFVTATCAHPESLKGQSI 459
Query: 245 LDIPEHEFKC 254
+P F C
Sbjct: 460 FSVPPESFVC 469
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 133 QNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
+N IT+LP KAF RL ++DL++N+I + FQGL SL L L NN++ L DG F
Sbjct: 177 KNRITQLPVKAF-KLPRLTQLDLNRNRIRLIEGLTFQGLDSLEVLKLQRNNISKLTDGAF 235
Query: 193 AELFRLRTLRISENSFI 209
L R+ L + NS +
Sbjct: 236 WGLSRMHVLHLEYNSLV 252
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW-LKRYPRLGLYTKCFAPS 63
L N + + F ++ L+ L IS +SF+CDC L WL W L R + + C P
Sbjct: 393 LGENAIRSVQFDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLLGRMLQAFVTATCAHPE 452
Query: 64 HIKGQNILDIPEHEFKC 80
+KGQ+I +P F C
Sbjct: 453 SLKGQSIFSVPPESFVC 469
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 3/125 (2%)
Query: 85 EKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAF 144
E T C C CA +DC +GL +P LP T L L N ++E+ P F
Sbjct: 9 EPATATAGPRVPCAAACTCAGDSLDCGGRGLAALPQDLPAWTRSLNLSYNKLSEIDPSGF 68
Query: 145 ANYKRLRRIDLSKNQISKVAVDAFQGLKS-LTSLTLNNNNLTYLPDGVFAELFRLRTLRI 203
+ L+ + L+ N+++ A+ + S + SL L +N + + L L +
Sbjct: 69 EDLPNLQEVYLNNNELT--AIPSLGDASSHIVSLFLQHNKIRSVEGSRLKAYLSLEVLDL 126
Query: 204 SENSF 208
S N+
Sbjct: 127 SWNNI 131
>gi|344241632|gb|EGV97735.1| Leucine-rich repeats and immunoglobulin-like domains protein 1
[Cricetulus griseus]
Length = 893
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 63/126 (50%), Gaps = 4/126 (3%)
Query: 133 QNDITELPPKAFANYKRLRRIDLSKNQISKVAVD---AFQGLKSLTSLTLNNNNLTYLPD 189
N I+ + AF K LR +DL N+IS D AF GL +L+ L L N + +
Sbjct: 269 HNAISHIAEGAFKGLKSLRVLDLDHNEISGTIEDTSGAFMGLDNLSKLNLGENAIRSIQF 328
Query: 190 GVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAPSHIKGQNILDIP 248
FA++ L+ L IS SF+CDC L WL WL R + + C P +KGQ+I +
Sbjct: 329 DAFAKMKNLKELHISSESFLCDCQLKWLPPWLVGRMLQTFVTATCAHPESLKGQSIFSVL 388
Query: 249 EHEFKC 254
F C
Sbjct: 389 PDSFVC 394
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 133 QNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
+N IT+LP KAF RL ++DL++N+I + FQGL SL L L NN++ L DG F
Sbjct: 126 KNRITQLPVKAF-KLPRLTQLDLNRNRIRLIEGLTFQGLDSLEVLKLQRNNISKLTDGAF 184
Query: 193 AELFRLRTLRISENSFI 209
L ++ L + NS +
Sbjct: 185 WGLSKMHVLHLEYNSLV 201
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAPS 63
L N + + FA++ L+ L IS SF+CDC L WL WL R + + C P
Sbjct: 318 LGENAIRSIQFDAFAKMKNLKELHISSESFLCDCQLKWLPPWLVGRMLQTFVTATCAHPE 377
Query: 64 HIKGQNILDIPEHEFKC 80
+KGQ+I + F C
Sbjct: 378 SLKGQSIFSVLPDSFVC 394
>gi|76161992|gb|ABA40084.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 167
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C K L VP +P T L + N IT+L P F + L+++ L
Sbjct: 1 ACPSQCSCSGTHVNCERKRLTSVPAGIPTTTQTLWGDSNQITKLEPGVFDSLVNLQKLYL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
+NQ+S + V F L +L L L NN+L +P G F L L + + N + C+C +
Sbjct: 61 GENQLSALPVGVFDSLVNLQGLGLQNNHLKSIPRGAFDNLKSLTHIWLFGNPWDCECSDI 120
Query: 215 SWLHRWLKRYPRL 227
+L W+ ++ +
Sbjct: 121 LYLKNWIVQHASI 133
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKV--LLYSYISNNFKR 351
+CP C C+ V+C K L VP +P TT T +++ K+ ++ + N K
Sbjct: 1 ACPSQCSCSGTHVNCERKRLTSVPAGIP--TTTQTLWGDSNQITKLEPGVFDSLVNLQKL 58
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L +N ++ LP F + L+ + L+ N + +P AF N K L +
Sbjct: 59 Y------LGENQLSALPVGVFDSLVNLQGLGLQNNHLKSIPRGAFDNLKSLTHI 106
>gi|355690861|gb|AER99294.1| G protein-coupled receptor 124 [Mustela putorius furo]
Length = 625
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 67/131 (51%), Gaps = 1/131 (0%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L L N I+ + P AF L+R+DLS N+I + + FQGL L L ++ N + +
Sbjct: 54 KLDLRNNVISTVQPGAFLGLGELKRLDLSNNRIGCLTSETFQGLPRLLRLNISGNIFSSV 113
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTKCFAPSHIKGQNILD 246
GVF EL L+ + + CDC L WL W + R +L T C PS + Q +
Sbjct: 114 QPGVFDELPALKVVDLGTEYLTCDCRLRWLLSWARNRSLQLSERTLCAYPSALHAQALGG 173
Query: 247 IPEHEFKCSGS 257
+ E + +C G+
Sbjct: 174 LQEAQLRCEGA 184
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 1 MPRTL----NNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGL 55
+PR L + N + + GVF EL L+ + + CDC L WL W + R +L
Sbjct: 97 LPRLLRLNISGNIFSSVQPGVFDELPALKVVDLGTEYLTCDCRLRWLLSWARNRSLQLSE 156
Query: 56 YTKCFAPSHIKGQNILDIPEHEFKCSGPVEKPT 88
T C PS + Q + + E + +C G +E T
Sbjct: 157 RTLCAYPSALHAQALGGLQEAQLRCEGALELHT 189
>gi|76161733|gb|ABA39963.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 169
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 64/133 (48%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDCR K + VP +P L L N IT+L P F + L + L
Sbjct: 1 ACPSQCSCDQTTVDCRNKRFSSVPAGIPTDRQNLWLNNNQITKLEPGVFDSLTPLTYLGL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ++ + F L LT L L+ N L +P G F L L + + N + C C +
Sbjct: 61 GGNQLAALPAGLFDKLPKLTHLVLHTNQLKSVPRGAFDNLKSLTHIWLLNNPWDCACSDI 120
Query: 215 SWLHRWLKRYPRL 227
+L RW+ ++P L
Sbjct: 121 LYLSRWISQHPGL 133
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C VDCR K + VP +P T ++ +++ K L + ++ T
Sbjct: 1 ACPSQCSCDQTTVDCRNKRFSSVPAGIP--TDRQNLWLNNNQITK--LEPGVFDSLTPLT 56
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + LP F +L + L N + +P AF N K L +
Sbjct: 57 YLG--LGGNQLAALPAGLFDKLPKLTHLVLHTNQLKSVPRGAFDNLKSLTHI 106
>gi|301614197|ref|XP_002936568.1| PREDICTED: leucine-rich repeat-containing protein 3-like [Xenopus
(Silurana) tropicalis]
Length = 258
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 7/136 (5%)
Query: 95 PSCPHPCRCAD----GIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRL 150
+CP C+C+D +V C + L ++PI LP T L+L+ N I ++P AF + L
Sbjct: 30 ATCPKSCQCSDIDGATVVHCSSRDLEEIPIDLPMDTVSLKLDANKIHQVPNNAFKDLNYL 89
Query: 151 RRIDLSKNQISKVAVDAFQGL-KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFI 209
+ +DLS+N I K+ + AF+G+ + L L L+ N + +P A+L R + +R+S N +
Sbjct: 90 QELDLSRNSIEKIDLAAFKGVSEGLKLLDLSGNQIHSIPKEALAKL-RAK-IRLSNNPWH 147
Query: 210 CDCHLSWLHRWLKRYP 225
CDC L + R L P
Sbjct: 148 CDCSLQEMLRELILDP 163
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 13/119 (10%)
Query: 293 PSCPHPCRCAD----GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNN 348
+CP C+C+D +V C + L ++PI LP T L ++D ++ +N
Sbjct: 30 ATCPKSCQCSDIDGATVVHCSSRDLEEIPIDLPMDTVSL-------KLDANKIHQVPNNA 82
Query: 349 FKRWTN-RSRRLEQNDITELPPKAFANYKR-LRRIRLEQNDITELPPKAFANYKRLRRM 405
FK + L +N I ++ AF L+ + L N I +P +A A + R+
Sbjct: 83 FKDLNYLQELDLSRNSIEKIDLAAFKGVSEGLKLLDLSGNQIHSIPKEALAKLRAKIRL 141
>gi|149022865|gb|EDL79759.1| leucine-rich repeat-containing G protein-coupled receptor 4 [Rattus
norvegicus]
Length = 951
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 87 PTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFA 145
P+G AA P C PC C D VDC KGL VP L T L + N+IT+LP AF
Sbjct: 21 PSG--AAPPLCAAPCSCDGDRRVDCSGKGLTAVPEGLSAFTQALDISMNNITQLPEDAFK 78
Query: 146 NYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISE 205
++ L + L+ N +S + A GLK L LTL NN L +P L L++LR+
Sbjct: 79 SFPFLEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLRTVPSEAIHGLSALQSLRLDA 138
Query: 206 N 206
N
Sbjct: 139 N 139
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 67/150 (44%), Gaps = 10/150 (6%)
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADG-----IVDCREKGLNKVP 119
I NI +PE FK S P + + S HP + G ++ + L VP
Sbjct: 64 ISMNNITQLPEDAFK-SFPFLEELQLAGNDLSFIHP-KALSGLKELKVLTLQNNQLRTVP 121
Query: 120 ---ILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTS 176
I A LRL+ N IT +P +F +LR + L N +++V V L +L +
Sbjct: 122 SEAIHGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVRPLSNLPTLQA 181
Query: 177 LTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
LTL NN++ +PD F L L L + N
Sbjct: 182 LTLALNNISSIPDFAFTNLSSLVVLHLHNN 211
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 9/122 (7%)
Query: 285 PTGECAAEPSCPHPCRC-ADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYS 343
P+G AA P C PC C D VDC KGL VP L T L +S++ + ++ +
Sbjct: 21 PSG--AAPPLCAAPCSCDGDRRVDCSGKGLTAVPEGLSAFTQALD--ISMNNITQLPEDA 76
Query: 344 YISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLR 403
+ S F +L ND++ + PKA + K L+ + L+ N + +P +A L+
Sbjct: 77 FKSFPFLE----ELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLRTVPSEAIHGLSALQ 132
Query: 404 RM 405
+
Sbjct: 133 SL 134
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 109/267 (40%), Gaps = 66/267 (24%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
++ NN+T LP+ F L L+++ N LS++H P+ A S
Sbjct: 64 ISMNNITQLPEDAFKSFPFLEELQLAGND------LSFIH------PK--------ALSG 103
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECA-------AEPSCPHPCRCADGIVDCR-----E 112
+K +L + ++ + + P E G A A P +G+V R +
Sbjct: 104 LKELKVLTLQNNQLR-TVPSEAIHGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDD 162
Query: 113 KGLNKVPIL----LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAF 168
L +VP+ LP L L N+I+ +P AF N L + L N+I ++ F
Sbjct: 163 NSLTEVPVRPLSNLP-TLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCF 221
Query: 169 QGLKSLTSLTLNNNNL-----------------------TYLPDGVFAELFRLRTLRISE 205
GL +L +L LN NNL + +PDG F LRT+ + +
Sbjct: 222 DGLDNLETLDLNYNNLDEFPQAIKALPSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYD 281
Query: 206 N--SFICDC---HLSWLHRWLKRYPRL 227
N SF+ + +LS LH + R L
Sbjct: 282 NPLSFVGNSAFHNLSDLHSLVIRGASL 308
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N+I +LP +F + L I L +NQIS + + FQGL SL L L+ N + +
Sbjct: 348 LDLSYNNIRDLP--SFNGCRALEEISLQRNQISLIKENTFQGLTSLRILDLSRNLIREIH 405
Query: 189 DGVFAELFRLRTLRISEN 206
G FA+L + L +S N
Sbjct: 406 SGAFAKLGTITNLDVSFN 423
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL 184
A E+ L++N I+ + F LR +DLS+N I ++ AF L ++T+L ++ N L
Sbjct: 366 ALEEISLQRNQISLIKENTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSFNEL 425
Query: 185 TYLP 188
T P
Sbjct: 426 TSFP 429
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 85/233 (36%), Gaps = 46/233 (19%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N++T +P+ F L +LR L + +NS R L P L T
Sbjct: 136 LDANHITSVPEDSFEGLVQLRHLWLDDNSLT-----EVPVRPLSNLPTLQALT------- 183
Query: 65 IKGQNILDIPEHEF-KCSGPVEKPTGECAAEPSCPHPCRCADGI-----VDCREKGLNKV 118
+ NI IP+ F S V + H C DG+ +D L++
Sbjct: 184 LALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQH---CFDGLDNLETLDLNYNNLDEF 240
Query: 119 PILLPE--ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSL-- 174
P + + EL N I+ +P AF LR I L N +S V AF L L
Sbjct: 241 PQAIKALPSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHS 300
Query: 175 ---------------------TSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
SLTL ++ +PD + LRTL +S N
Sbjct: 301 LVIRGASLVQWFPNLTGTVHLESLTLTGTKISSIPDDLCQNQKMLRTLDLSYN 353
>gi|76162307|gb|ABA40224.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 168
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C+ K L VP +P T L N IT+L F L+++ L
Sbjct: 1 ACPSQCSCSGTTVNCKSKSLASVPAGIPSTTHYLDFSYNQITKLEQGVFDRLVNLQQLYL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ+S + F L +L L LN+N L +PDG FA L L + + N + C+C +
Sbjct: 61 GANQLSALPEGVFDRLLNLQWLALNDNQLKSIPDGAFARLPSLTHVWLHTNPWDCECSDI 120
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L W+ ++ + PS G + KCSG++ R+
Sbjct: 121 LYLKNWIVQHASI------VNPSGHGGVD-------NVKCSGTNTPVRA 156
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C+ K L VP +P T L + S +++ K+ F R
Sbjct: 1 ACPSQCSCSGTTVNCKSKSLASVPAGIPSTTHYLDF--SYNQITKLE-----QGVFDRLV 53
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N + L N ++ LP F L+ + L N + +P AFA L +
Sbjct: 54 NLQQLYLGANQLSALPEGVFDRLLNLQWLALNDNQLKSIPDGAFARLPSLTHV 106
>gi|76162225|gb|ABA40186.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 168
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 14/169 (8%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDC K L VP +P L L N IT+L P F L+R+ L
Sbjct: 1 ACPSQCSCSGTTVDCSGKSLASVPTGIPTDRQNLWLNNNQITKLEPGVFDRLVNLQRLWL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
+ NQ++ + F L LT L L+ N L +P G F L L + + N + C+C +
Sbjct: 61 NNNQLTSLPTGVFDKLTQLTYLLLDTNQLKSIPRGAFDNLKSLTYIYLFNNPWDCECSDI 120
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L W+ ++ + PS G + KCSG++ R+
Sbjct: 121 LYLKNWIVQHASI------VNPSGHGGVD-------NVKCSGTNTPVRA 156
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ VDC K L VP +P T ++ +++ K+ F R
Sbjct: 1 ACPSQCSCSGTTVDCSGKSLASVPTGIP--TDRQNLWLNNNQITKLE-----PGVFDRLV 53
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R L N +T LP F +L + L+ N + +P AF N K L +
Sbjct: 54 NLQRLWLNNNQLTSLPTGVFDKLTQLTYLLLDTNQLKSIPRGAFDNLKSLTYI 106
>gi|281339484|gb|EFB15068.1| hypothetical protein PANDA_006723 [Ailuropoda melanoleuca]
Length = 1065
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 5/130 (3%)
Query: 129 LRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLT 185
L L N+I+ E +AFA L ++ L NQI + AF GL+SL L LNNN +
Sbjct: 364 LNLRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSITKKAFIGLESLEHLDLNNNAIM 423
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAPSHIKGQNI 244
+ + F++ RL+ L ++ NS +CDCHL WL +WL + + C P + GQ++
Sbjct: 424 SIQENAFSQT-RLKELILNTNSLLCDCHLKWLLQWLVDNNLQRSVNVSCAHPEWLAGQSL 482
Query: 245 LDIPEHEFKC 254
L++ +F C
Sbjct: 483 LNVDLKDFVC 492
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L + QN + + P A+ +RL +DLS NQ++++ AF GL L L L +N +T++
Sbjct: 291 QLYVSQNAVERISPDAWEFCQRLSELDLSYNQLTRLDESAFLGLSLLERLNLGDNRVTHI 350
Query: 188 PDGVFAELFRLRTLRISEN 206
DGVF L L+TL + N
Sbjct: 351 ADGVFRFLSNLQTLNLRNN 369
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAPS 63
LNNN + + + F++ RL+ L ++ NS +CDCHL WL +WL + + C P
Sbjct: 417 LNNNAIMSIQENAFSQT-RLKELILNTNSLLCDCHLKWLLQWLVDNNLQRSVNVSCAHPE 475
Query: 64 HIKGQNILDIPEHEFKC 80
+ GQ++L++ +F C
Sbjct: 476 WLAGQSLLNVDLKDFVC 492
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
++L +N I+ +PPK F L+ ++L +N+I V FQGL SL SL + N ++ L
Sbjct: 197 VKLNRNRISMIPPKIF-KLPHLQFLELKRNRIKVVEGLTFQGLDSLRSLKMQRNGISKLK 255
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLH 218
DG F L + L + N+ + + + WL+
Sbjct: 256 DGAFFGLDNMEELELEYNN-LTEVNKGWLY 284
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L++N I + F LR + + +N ISK+ AF GL ++ L L NNLT +
Sbjct: 220 LELKRNRIKVVEGLTFQGLDSLRSLKMQRNGISKLKDGAFFGLDNMEELELEYNNLTEVN 279
Query: 189 DGVFAELFRLRTLRISENS 207
G L L+ L +S+N+
Sbjct: 280 KGWLYGLRMLQQLYVSQNA 298
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 127 TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTY 186
T L L N I E+ +AF Y L +DLS N IS++ +F ++ L L L+NN +T
Sbjct: 123 TLLSLVHNIIPEINAEAFQFYPALENLDLSSNIISEIKTSSFPRMQ-LKYLNLSNNRITI 181
Query: 187 LPDGVFAEL 195
L G F L
Sbjct: 182 LEAGCFDNL 190
>gi|81175483|gb|ABB59079.1| variable lymphocyte receptor A [Eptatretus stoutii]
Length = 324
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Query: 101 CRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKN 158
C C D VDC KGL +P +P TT+LRL QN +++L P AF K L +DL N
Sbjct: 34 CTCNDQTKNVDCSSKGLTAIPSNIPVDTTQLRLHQNSLSKLSPTAFHGLKELTYLDLDGN 93
Query: 159 QISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
++ + F+ LK+L +L + +N L LP GVF L L L +S+N
Sbjct: 94 KLQTLPAGIFKELKNLETLWVTDNKLQALPVGVFDHLVSLDKLVLSQNQL 143
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-LSWLHRWLKRYPRLGLYTKCFAP 62
TL+ N L +P+G F +L ++ LR++ N + C C+ + ++ +WLK+ GL A
Sbjct: 161 TLSQNQLRRVPEGAFDKLQNIKDLRLTNNPWDCTCNDILYMAKWLKKKQDEGLGGVDTAG 220
Query: 63 SHIKGQNILDIPEHE 77
G+ +L+I E E
Sbjct: 221 CEEGGKAVLEITEEE 235
>gi|301765750|ref|XP_002918301.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 2-like [Ailuropoda melanoleuca]
Length = 1224
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 5/130 (3%)
Query: 129 LRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLT 185
L L N+I+ E +AFA L ++ L NQI + AF GL+SL L LNNN +
Sbjct: 523 LNLRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSITKKAFIGLESLEHLDLNNNAIM 582
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAPSHIKGQNI 244
+ + F++ RL+ L ++ NS +CDCHL WL +WL + + C P + GQ++
Sbjct: 583 SIQENAFSQT-RLKELILNTNSLLCDCHLKWLLQWLVDNNLQRSVNVSCAHPEWLAGQSL 641
Query: 245 LDIPEHEFKC 254
L++ +F C
Sbjct: 642 LNVDLKDFVC 651
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L + QN + + P A+ +RL +DLS NQ++++ AF GL L L L +N +T++
Sbjct: 450 QLYVSQNAVERISPDAWEFCQRLSELDLSYNQLTRLDESAFLGLSLLERLNLGDNRVTHI 509
Query: 188 PDGVFAELFRLRTLRISENSF 208
DGVF L L+TL + N
Sbjct: 510 ADGVFRFLSNLQTLNLRNNEI 530
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL-KRYPRLGLYTKCFAPS 63
LNNN + + + F++ RL+ L ++ NS +CDCHL WL +WL + + C P
Sbjct: 576 LNNNAIMSIQENAFSQT-RLKELILNTNSLLCDCHLKWLLQWLVDNNLQRSVNVSCAHPE 634
Query: 64 HIKGQNILDIPEHEFKC 80
+ GQ++L++ +F C
Sbjct: 635 WLAGQSLLNVDLKDFVC 651
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
++L +N I+ +PPK F L+ ++L +N+I V FQGL SL SL + N ++ L
Sbjct: 356 VKLNRNRISMIPPKIF-KLPHLQFLELKRNRIKVVEGLTFQGLDSLRSLKMQRNGISKLK 414
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLH 218
DG F L + L + N+ + + + WL+
Sbjct: 415 DGAFFGLDNMEELELEYNN-LTEVNKGWLY 443
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L++N I + F LR + + +N ISK+ AF GL ++ L L NNLT +
Sbjct: 379 LELKRNRIKVVEGLTFQGLDSLRSLKMQRNGISKLKDGAFFGLDNMEELELEYNNLTEVN 438
Query: 189 DGVFAELFRLRTLRISENSF 208
G L L+ L +S+N+
Sbjct: 439 KGWLYGLRMLQQLYVSQNAV 458
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 127 TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTY 186
T L L N I E+ +AF Y L +DLS N IS++ +F ++ L L L+NN +T
Sbjct: 282 TLLSLVHNIIPEINAEAFQFYPALENLDLSSNIISEIKTSSFPRMQ-LKYLNLSNNRITI 340
Query: 187 LPDGVFAEL 195
L G F L
Sbjct: 341 LEAGCFDNL 349
>gi|84781785|ref|NP_001028581.1| leucine-rich repeat-containing G-protein coupled receptor 6
precursor [Mus musculus]
gi|123795217|sp|Q3UVD5.1|LGR6_MOUSE RecName: Full=Leucine-rich repeat-containing G-protein coupled
receptor 6; Flags: Precursor
gi|74210214|dbj|BAE23335.1| unnamed protein product [Mus musculus]
Length = 967
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 63/116 (54%), Gaps = 4/116 (3%)
Query: 95 PSCPHPCRCA-DGIV---DCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRL 150
P+CP PC C DGI+ DC E GL+ VP L T L L N++TEL P F + + L
Sbjct: 33 PACPAPCHCQEDGIMLSADCSELGLSVVPADLDPLTAYLDLSMNNLTELQPGLFHHLRFL 92
Query: 151 RRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
+ LS N +S + AF GL SL L L +N L +P EL L++LR+ N
Sbjct: 93 EELRLSGNHLSHIPGQAFSGLHSLKILMLQSNQLRGIPAEALWELPSLQSLRLDAN 148
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 153/424 (36%), Gaps = 92/424 (21%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ NNLT L G+F L L LR+S N HL SH
Sbjct: 73 LSMNNLTELQPGLFHHLRFLEELRLSGN------HL----------------------SH 104
Query: 65 IKGQNILDIPEHEFKC----SGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
I GQ + H K S + E E R ++
Sbjct: 105 IPGQAFSGL--HSLKILMLQSNQLRGIPAEALWELPSLQSLRLDANLIS----------- 151
Query: 121 LLPEATTE-------LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKS 173
L+PE + E L L+ N +TE+P +A N L+ + L+ N I + AFQ L S
Sbjct: 152 LVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNHIRHIPDYAFQNLTS 211
Query: 174 LTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKC 233
L L L+NN + ++ F L L TL ++ N R L R LG +
Sbjct: 212 LVVLHLHNNRIQHVGTHSFEGLHNLETLDLNYNEL---QEFPLAIRTLGRLQELGFHNN- 267
Query: 234 FAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEP 293
NI IPE F GS + Y P++ G A +
Sbjct: 268 ---------NIKAIPEKAFM--GSPLLQTIHFYDN------------PIQF-VGRSAFQY 303
Query: 294 SCPHPCRCADGIVDCRE----KGLNKVPIL-LPEATTELTYMVSIDRVDKVLLYSYISNN 348
+G D +E KG + IL L A L ++ ++ + N
Sbjct: 304 LSKLHTLSLNGATDIQEFPDLKGTTSLEILTLTRAGIRLLPPGVCQQLPRLRILELSHNQ 363
Query: 349 FKRW--TNRSRRLEQ-----NDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKR 401
+ +R ++LE+ N I E+ F+ L+ + L N I + P+AF+ +
Sbjct: 364 IEELPSLHRCQKLEEIGLRHNRIKEIGADTFSQLGSLQALDLSWNAIRAIHPEAFSTLRS 423
Query: 402 LRRM 405
L ++
Sbjct: 424 LVKL 427
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 66/165 (40%), Gaps = 24/165 (14%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
E+ L N I E+ F+ L+ +DLS N I + +AF L+SL L L +N LT L
Sbjct: 378 EIGLRHNRIKEIGADTFSQLGSLQALDLSWNAIRAIHPEAFSTLRSLVKLDLTDNQLTTL 437
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDI 247
P A L L L++ N + ++ F+ IL++
Sbjct: 438 P---LAGLGGLMHLKLKGNLAL---------------------SQAFSKDSFPKLRILEV 473
Query: 248 PEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAE 292
P C+ + K + + DFHP ++P G A +
Sbjct: 474 PYAYQCCAYGICASFFKTSGQWQAEDFHPEEEEAPKRPLGLLAGQ 518
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 49/117 (41%), Gaps = 34/117 (29%)
Query: 293 PSCPHPCRCA-DGIV---DCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNN 348
P+CP PC C DGI+ DC E GL+ VP L T L
Sbjct: 33 PACPAPCHCQEDGIMLSADCSELGLSVVPADLDPLTAYLD-------------------- 72
Query: 349 FKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N++TEL P F + + L +RL N ++ +P +AF+ L+ +
Sbjct: 73 ----------LSMNNLTELQPGLFHHLRFLEELRLSGNHLSHIPGQAFSGLHSLKIL 119
>gi|187954925|gb|AAI41211.1| Leucine-rich repeat-containing G protein-coupled receptor 6 [Mus
musculus]
Length = 967
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 63/118 (53%), Gaps = 4/118 (3%)
Query: 93 AEPSCPHPCRCA-DGIV---DCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYK 148
P+CP PC C DGI+ DC E GL+ VP L T L L N++TEL P F + +
Sbjct: 31 GRPACPAPCHCQEDGIMLSADCSELGLSVVPADLDPLTAYLDLSMNNLTELQPGLFHHLR 90
Query: 149 RLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
L + LS N +S + AF GL SL L L +N L +P EL L++LR+ N
Sbjct: 91 FLEELRLSGNHLSHIPGQAFSGLHSLKILMLQSNQLRGIPAEALWELPSLQSLRLDAN 148
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 153/424 (36%), Gaps = 92/424 (21%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ NNLT L G+F L L LR+S N HL SH
Sbjct: 73 LSMNNLTELQPGLFHHLRFLEELRLSGN------HL----------------------SH 104
Query: 65 IKGQNILDIPEHEFKC----SGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPI 120
I GQ + H K S + E E R ++
Sbjct: 105 IPGQAFSGL--HSLKILMLQSNQLRGIPAEALWELPSLQSLRLDANLIS----------- 151
Query: 121 LLPEATTE-------LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKS 173
L+PE + E L L+ N +TE+P +A N L+ + L+ N I + AFQ L S
Sbjct: 152 LVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNHIRHIPDYAFQNLTS 211
Query: 174 LTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKC 233
L L L+NN + ++ F L L TL ++ N R L R LG +
Sbjct: 212 LVVLHLHNNRIQHVGTHSFEGLHNLETLDLNYNEL---QEFPLAIRTLGRLQELGFHNN- 267
Query: 234 FAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEP 293
NI IPE F G+ + Y P++ G A +
Sbjct: 268 ---------NIKAIPEKAFM--GNPLLQTIHFYDN------------PIQF-VGRSAFQY 303
Query: 294 SCPHPCRCADGIVDCRE----KGLNKVPIL-LPEATTELTYMVSIDRVDKVLLYSYISNN 348
+G D +E KG + IL L A L ++ ++ + N
Sbjct: 304 LSKLHTLSLNGATDIQEFPDLKGTTSLEILTLTRAGIRLLPPGVCQQLPRLRILELSHNQ 363
Query: 349 FKRW--TNRSRRLEQ-----NDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKR 401
+ +R ++LE+ N I E+ F+ L+ + L N I + P+AF+ +
Sbjct: 364 IEELPSLHRCQKLEEIGLRHNRIKEIGADTFSQLGSLQALDLSWNAIRAIHPEAFSTLRS 423
Query: 402 LRRM 405
L ++
Sbjct: 424 LVKL 427
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 66/165 (40%), Gaps = 24/165 (14%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
E+ L N I E+ F+ L+ +DLS N I + +AF L+SL L L +N LT L
Sbjct: 378 EIGLRHNRIKEIGADTFSQLGSLQALDLSWNAIRAIHPEAFSTLRSLVKLDLTDNQLTTL 437
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDI 247
P A L L L++ N + ++ F+ IL++
Sbjct: 438 P---LAGLGGLMHLKLKGNLAL---------------------SQAFSKDSFPKLRILEV 473
Query: 248 PEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAE 292
P C+ + K + + DFHP ++P G A +
Sbjct: 474 PYAYQCCAYGICASFFKTSGQWQAEDFHPEEEEAPKRPLGLLAGQ 518
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 49/119 (41%), Gaps = 34/119 (28%)
Query: 291 AEPSCPHPCRCA-DGIV---DCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYIS 346
P+CP PC C DGI+ DC E GL+ VP L T L
Sbjct: 31 GRPACPAPCHCQEDGIMLSADCSELGLSVVPADLDPLTAYLD------------------ 72
Query: 347 NNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N++TEL P F + + L +RL N ++ +P +AF+ L+ +
Sbjct: 73 ------------LSMNNLTELQPGLFHHLRFLEELRLSGNHLSHIPGQAFSGLHSLKIL 119
>gi|431896506|gb|ELK05918.1| Leucine-rich repeat and immunoglobulin-like domains protein 2
[Pteropus alecto]
Length = 1269
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 72/131 (54%), Gaps = 7/131 (5%)
Query: 129 LRLEQNDIT---ELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLT 185
L L N+I+ E +AFA L ++ L N+I + AF GL+SL L LNNN +
Sbjct: 568 LNLRNNEISWAIEDASEAFAGLTSLTKLILQGNRIKSITKKAFIGLESLEHLDLNNNAIM 627
Query: 186 YLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL--KRYPRLGLYTKCFAPSHIKGQN 243
+ + F++ RL+ L ++ NS +CDCHL WL +WL K + + C P + GQ+
Sbjct: 628 SIQENAFSQT-RLKELILNTNSLLCDCHLKWLLQWLVDKNFEH-AVNVSCAHPEWLAGQS 685
Query: 244 ILDIPEHEFKC 254
IL++ +F C
Sbjct: 686 ILNVDLKDFVC 696
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L + QN + + P A+ +RL +DLS NQ++++ AF GL L L L +N +T++
Sbjct: 495 QLYVSQNAVERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHI 554
Query: 188 PDGVFAELFRLRTLRISEN 206
DGVF L L+TL + N
Sbjct: 555 ADGVFRFLSNLQTLNLRNN 573
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWL--KRYPRLGLYTKCFAP 62
LNNN + + + F++ RL+ L ++ NS +CDCHL WL +WL K + + C P
Sbjct: 621 LNNNAIMSIQENAFSQT-RLKELILNTNSLLCDCHLKWLLQWLVDKNFEH-AVNVSCAHP 678
Query: 63 SHIKGQNILDIPEHEFKC 80
+ GQ+IL++ +F C
Sbjct: 679 EWLAGQSILNVDLKDFVC 696
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
++L +N I+ +PPK F L+ ++L +N+I V FQGL SL SL + N ++ L
Sbjct: 401 VKLNRNRISMIPPKIF-KLPHLQFLELKRNKIKVVEGLTFQGLDSLRSLKMQRNGISKLK 459
Query: 189 DGVFAELFRLRTLRISENSFICDCHLSWLH 218
DG F L + L + N+ + + + WL+
Sbjct: 460 DGAFFGLDNMEELELEHNN-LTEVNKGWLY 488
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L++N I + F LR + + +N ISK+ AF GL ++ L L +NNLT +
Sbjct: 424 LELKRNKIKVVEGLTFQGLDSLRSLKMQRNGISKLKDGAFFGLDNMEELELEHNNLTEVN 483
Query: 189 DGVFAELFRLRTLRISENS 207
G L L+ L +S+N+
Sbjct: 484 KGWLYGLRMLQQLYVSQNA 502
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 127 TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTY 186
T L L N I ++ +AF Y L +DLS N IS++ +F ++ L L L+NN +T
Sbjct: 327 TLLSLVHNIIPDINAEAFQFYPALESLDLSSNIISEIKTSSFPRMQ-LKYLNLSNNRITI 385
Query: 187 LPDGVFAEL 195
L G F L
Sbjct: 386 LEAGCFDNL 394
>gi|119928650|dbj|BAF43147.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 173
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 78/169 (46%), Gaps = 9/169 (5%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C K L VP +P T EL L N IT+L P F + +L + L
Sbjct: 11 ACPARCSCSGTTVNCGGKSLASVPAGIPTTTGELYLHSNQITKLEPGVFDSLTQLTVLIL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
NQ+ + F L LT L+L +N L +P G F L L + + N + C C +
Sbjct: 71 HTNQLQALPAGVFDKLTQLTQLSLRDNQLKSIPRGAFDNLKSLTHIWLFNNPWDCQCTDI 130
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L W+ ++ + H G + P+ KCSG++ R+
Sbjct: 131 LYLSGWVAQHSGI-------VREHWVGSSWTVNPDSA-KCSGTNTPVRA 171
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C K L VP +P T EL Y+ S +++ K L + ++ + T
Sbjct: 11 ACPARCSCSGTTVNCGGKSLASVPAGIPTTTGEL-YLHS-NQITK--LEPGVFDSLTQLT 66
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N + LP F +L ++ L N + +P AF N K L +
Sbjct: 67 --VLILHTNQLQALPAGVFDKLTQLTQLSLRDNQLKSIPRGAFDNLKSLTHI 116
>gi|119928561|dbj|BAF43106.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 171
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C E+ L VP +P T L L N IT+L P F L+++ L
Sbjct: 11 ACPARCSCSGTTVYCHERSLASVPAGIPTTTQTLTLYTNQITKLEPGVFDRLANLQQLYL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ+S + V F L LT L+L +N L +P G F L L + + +N + C C +
Sbjct: 71 GGNQLSALPVGVFDKLTQLTHLSLQDNQLKSIPRGAFDNLKSLTHIWLFDNPWDCACSDI 130
Query: 215 SWLHRWLKRYPRL 227
+L RW+ ++P +
Sbjct: 131 LYLSRWISQHPGV 143
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C+ V C E+ L VP +P T LT + I +++ + F R
Sbjct: 11 ACPARCSCSGTTVYCHERSLASVPAGIPTTTQTLTLYTNQITKLEPGV--------FDRL 62
Query: 353 TN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N + L N ++ LP F +L + L+ N + +P AF N K L +
Sbjct: 63 ANLQQLYLGGNQLSALPVGVFDKLTQLTHLSLQDNQLKSIPRGAFDNLKSLTHI 116
>gi|284010896|dbj|BAI66923.1| variable lymphocyte receptor B [Eptatretus burgeri]
Length = 203
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 81/183 (44%), Gaps = 21/183 (11%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ + C KGL VP +P +TT+L L N + LP F RL + L
Sbjct: 23 ACPSRCSCSGTEIRCISKGLTSVPSGIPSSTTKLWLNSNKLQSLPSGVFDKLTRLTLLAL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF------I 209
++NQ+ + F L SLT L LN N L LP+GVF +L L L + N I
Sbjct: 83 NQNQLQSLPDGVFDKLTSLTHLALNQNQLQSLPNGVFDKLTSLTHLGLRTNQLKSVPDGI 142
Query: 210 CDCHLSWLHR-------WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETR 262
D L+ L R W PR+ ++ + K Q KCSGS R
Sbjct: 143 FD-RLTSLQRIYLYSNPWDCSCPRIDYLSRWLNKNSQKEQG-------SAKCSGSGKPVR 194
Query: 263 SKI 265
S I
Sbjct: 195 SII 197
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 47/113 (41%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ + C KGL VP +P +TT+L ++ L S S F + T
Sbjct: 23 ACPSRCSCSGTEIRCISKGLTSVPSGIPSSTTKL-------WLNSNKLQSLPSGVFDKLT 75
Query: 354 NRS-RRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L QN + LP F L + L QN + LP F L +
Sbjct: 76 RLTLLALNQNQLQSLPDGVFDKLTSLTHLALNQNQLQSLPNGVFDKLTSLTHL 128
>gi|338722632|ref|XP_001500447.2| PREDICTED: relaxin receptor 1 [Equus caballus]
Length = 746
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Query: 85 EKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAF 144
E EC S P C C D +DC + L VP + T++ L+ N I +LPP F
Sbjct: 77 EAGASECLL-GSVPVQCLCHDLELDCDKTNLRDVPSV-SSNVTKMSLQWNLIRKLPPDGF 134
Query: 145 ANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRIS 204
Y L+++ L N+I V++ AF+GL SLT L L++N +T+L GVF +L RL L I
Sbjct: 135 RKYHDLQKLCLQNNKIRSVSIYAFRGLYSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIE 194
Query: 205 EN 206
+N
Sbjct: 195 DN 196
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 84/200 (42%), Gaps = 31/200 (15%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L++N +T+L GVF +L RL L I +N HLS R L Y
Sbjct: 169 LSHNRITFLKPGVFEDLHRLEWLIIEDN------HLS-------RISPLTFYG------- 208
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCRE-KGLNKVPILLP 123
+ +L + ++ C +P C H R + L + +
Sbjct: 209 LNSLILLALMDNVLTC----------LPDKPLCQHMPRLRWLDFEGNHFHNLRNLTFISC 258
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
T L + +N I +L FA ++L +DL N+I ++ + F+ LK L+ L L+ N
Sbjct: 259 SNLTVLVMRKNKINQLNENTFAPLQKLDELDLGSNKIENLSPNVFKDLKELSQLNLSYNP 318
Query: 184 LTYLPDGVFAELFRLRTLRI 203
+ + + F L +L++L +
Sbjct: 319 IQKIQENQFDHLIKLKSLSL 338
>gi|198438533|ref|XP_002126727.1| PREDICTED: similar to mCG123902 [Ciona intestinalis]
Length = 1611
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 2/135 (1%)
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
L ++ T L L +N I+ + P F N++ L+R++LS N I ++ F GL SL L LNN
Sbjct: 93 LLKSVTSLILAENQISYIGPSTFTNFRNLKRLNLSHNNIGRLDRSMFLGLTSLERLYLNN 152
Query: 182 NNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW--LKRYPRLGLYTKCFAPSHI 239
N +P F L L+ L +S +C+C + W + R +L L C P +
Sbjct: 153 NIFPLIPGDTFTSLTSLKRLNVSSTHLVCNCMMKEFLVWSKMNRTTKLKLNGACTVPLSM 212
Query: 240 KGQNILDIPEHEFKC 254
KG N+ + KC
Sbjct: 213 KGINLKRVKIKRLKC 227
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW--LKRYPRLGLYTKCFAP 62
LNNN +P F L L+ L +S +C+C + W + R +L L C P
Sbjct: 150 LNNNIFPLIPGDTFTSLTSLKRLNVSSTHLVCNCMMKEFLVWSKMNRTTKLKLNGACTVP 209
Query: 63 SHIKGQNILDIPEHEFKC 80
+KG N+ + KC
Sbjct: 210 LSMKGINLKRVKIKRLKC 227
>gi|432920016|ref|XP_004079796.1| PREDICTED: probable G-protein coupled receptor 125-like [Oryzias
latipes]
Length = 1261
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 63/127 (49%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L L N I+ + P AF L+++DLS N I + D F+GL +L L L N + +
Sbjct: 28 KLDLRSNLISHIDPGAFLGLSSLKKLDLSNNNIGCLNADIFKGLANLIRLNLAGNKFSSI 87
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDI 247
G F L L++L +CDC+L WL RW+K TKC P ++GQ + +
Sbjct: 88 SPGTFDNLESLKSLEFQTPYLLCDCNLLWLLRWIKDRNISVKNTKCSYPQSLQGQLVTSV 147
Query: 248 PEHEFKC 254
F C
Sbjct: 148 GPGLFTC 154
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 40/84 (47%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L N + + G F L L++L +CDC+L WL RW+K TKC P
Sbjct: 79 LAGNKFSSISPGTFDNLESLKSLEFQTPYLLCDCNLLWLLRWIKDRNISVKNTKCSYPQS 138
Query: 65 IKGQNILDIPEHEFKCSGPVEKPT 88
++GQ + + F C P+E P+
Sbjct: 139 LQGQLVTSVGPGLFTCDAPLELPS 162
>gi|126507794|gb|ABO15169.1| variable lymphocyte receptor B diversity region [Petromyzon
marinus]
Length = 168
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 77/169 (45%), Gaps = 14/169 (8%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C++K L VP +P T L L N IT+L P F L+++ L
Sbjct: 1 ACPSQCSCSGTEVHCQKKSLASVPAGIPTTTQVLYLYDNQITKLEPGVFDRLVNLQKLWL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
+ NQ+ + F L LT L L N L +P G F L L + + N + C C +
Sbjct: 61 NSNQLQALPARVFDKLTKLTHLYLGYNQLKSIPRGAFDNLKSLTHIWLYGNPWDCACSDI 120
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L RW+ ++P L L++ +CSG++ R+
Sbjct: 121 LYLSRWISQHPGLVF-------------GYLNLDPDSARCSGTNTPVRA 156
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKV--LLYSYISNNFKR 351
+CP C C+ V C++K L VP +P TT++ Y+ +++ K+ ++ + N K
Sbjct: 1 ACPSQCSCSGTEVHCQKKSLASVPAGIP-TTTQVLYLYD-NQITKLEPGVFDRLVNLQKL 58
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
W N N + LP + F +L + L N + +P AF N K L +
Sbjct: 59 WLN------SNQLQALPARVFDKLTKLTHLYLGYNQLKSIPRGAFDNLKSLTHI 106
>gi|165972485|ref|NP_001107114.1| leucine-rich repeat-containing protein 3 precursor [Danio rerio]
gi|205809891|sp|A8WHP9.1|LRRC3_DANRE RecName: Full=Leucine-rich repeat-containing protein 3; Flags:
Precursor
Length = 266
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 79/142 (55%), Gaps = 9/142 (6%)
Query: 91 CAAEPS--CPHPCRCAD----GIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAF 144
C + PS CP C C++ +V C + L ++P LP T L+L N IT++P +AF
Sbjct: 31 CLSVPSFACPKSCHCSERNSLTVVQCSSRNLEEIPPDLPHDTVSLQLSSNHITKIPNQAF 90
Query: 145 ANYKRLRRIDLSKNQISKVAVDAFQGL-KSLTSLTLNNNNLTYLPDGVFAELFRLRTLRI 203
N L+ +DLS+N I V AF+G+ +SL +L L++N++ +P FA L + +
Sbjct: 91 KNLPWLQELDLSRNAIETVDAGAFKGVSESLRTLDLSHNHMQGVPKEAFARLH--AKISL 148
Query: 204 SENSFICDCHLSWLHRWLKRYP 225
S N + C+C L + R L+ P
Sbjct: 149 SNNPWHCECTLQEVLRELRLDP 170
>gi|444509946|gb|ELV09439.1| Carboxypeptidase N subunit 2 [Tupaia chinensis]
Length = 546
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 2/123 (1%)
Query: 134 NDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFA 193
N I LP F + + L R+ L N ++ + FQ L L L L+ N LT LP+G+F
Sbjct: 322 NAIAHLPAGVFRDLEELVRLSLGSNNLTALHPALFQNLSKLELLGLSRNQLTTLPEGIFN 381
Query: 194 ELFRLRTLRISENSFICDCHLSWLHRWLKRYPR--LGLYTKCFAPSHIKGQNILDIPEHE 251
+ L L + N + CDCHL++L WL+ Y + T C P+++KGQ + + E +
Sbjct: 382 TNYNLFNLVLHGNPWQCDCHLAYLFDWLREYNDRLFNVQTYCAGPAYLKGQVVPALQEEQ 441
Query: 252 FKC 254
C
Sbjct: 442 LVC 444
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPR--LGLYTKCFAP 62
L+ N LT LP+G+F + L L + N + CDCHL++L WL+ Y + T C P
Sbjct: 367 LSRNQLTTLPEGIFNTNYNLFNLVLHGNPWQCDCHLAYLFDWLREYNDRLFNVQTYCAGP 426
Query: 63 SHIKGQNILDIPEHEFKC 80
+++KGQ + + E + C
Sbjct: 427 AYLKGQVVPALQEEQLVC 444
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 50/84 (59%)
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL 184
A L+L+ N + LP K F +L+ ++L++N ++++ + F+ L SL +L L+NN L
Sbjct: 145 ALETLQLQGNRLQTLPGKLFQPLTQLQTLNLAQNLLAQLPEELFRPLSSLQTLRLSNNAL 204
Query: 185 TYLPDGVFAELFRLRTLRISENSF 208
+ LP GVF L L+ L + N+
Sbjct: 205 SGLPPGVFRGLGSLQELFLDGNAI 228
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 55/134 (41%), Gaps = 25/134 (18%)
Query: 97 CPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITEL----------------- 139
CP C C V C E+ L +P +P T++ + T L
Sbjct: 22 CPSGCDCFIREVFCAEE-LAAIPPDIPPHATDIVFVETSFTSLGTRALGGSPNLTKVVFL 80
Query: 140 -------PPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVF 192
P AF RL ++++ + S ++ D F L SL TLN + L LP+G+F
Sbjct: 81 NTQLRHLAPDAFGGLPRLEDLEVTGSSFSNLSADIFSNLTSLGKFTLNFDMLEALPEGLF 140
Query: 193 AELFRLRTLRISEN 206
L L TL++ N
Sbjct: 141 HHLGALETLQLQGN 154
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L QN + +LP + F L+ + LS N +S + F+GL SL L L+ N ++ LP
Sbjct: 173 LNLAQNLLAQLPEELFRPLSSLQTLRLSNNALSGLPPGVFRGLGSLQELFLDGNAISELP 232
Query: 189 DGVFAELFRLRTLRISENSF 208
VF++L L L + N+
Sbjct: 233 PAVFSQLLCLEKLWLQRNAL 252
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 37/78 (47%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
LRL N ++ LPP F L+ + L N IS++ F L L L L N L +LP
Sbjct: 197 LRLSNNALSGLPPGVFRGLGSLQELFLDGNAISELPPAVFSQLLCLEKLWLQRNALGHLP 256
Query: 189 DGVFAELFRLRTLRISEN 206
VFA L L L + N
Sbjct: 257 PSVFASLGNLTFLNLQGN 274
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 87/204 (42%), Gaps = 34/204 (16%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAP- 62
TLN + L LP+G+F L L TL++ N L+ P K F P
Sbjct: 126 TLNFDMLEALPEGLFHHLGALETLQLQGNR-------------LQTLP-----GKLFQPL 167
Query: 63 SHIK----GQNIL-DIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGL-- 115
+ ++ QN+L +PE F+ ++ T + P G+ +E L
Sbjct: 168 TQLQTLNLAQNLLAQLPEELFRPLSSLQ--TLRLSNNALSGLPPGVFRGLGSLQELFLDG 225
Query: 116 NKVPILLPEATTELR------LEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQ 169
N + L P ++L L++N + LPP FA+ L ++L N++ + F
Sbjct: 226 NAISELPPAVFSQLLCLEKLWLQRNALGHLPPSVFASLGNLTFLNLQGNRLRTLPASLFA 285
Query: 170 GLKSLTSLTLNNNNLTYLPDGVFA 193
L SL+L++N L L +G FA
Sbjct: 286 HTPGLVSLSLSHNQLETLAEGTFA 309
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%)
Query: 136 ITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
+ LP F + L + L N++ + FQ L L +L L N L LP+ +F L
Sbjct: 132 LEALPEGLFHHLGALETLQLQGNRLQTLPGKLFQPLTQLQTLNLAQNLLAQLPEELFRPL 191
Query: 196 FRLRTLRISENSF 208
L+TLR+S N+
Sbjct: 192 SSLQTLRLSNNAL 204
>gi|440214900|gb|AGB93809.1| toll-like receptor [Biomphalaria glabrata]
Length = 1181
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 101/233 (43%), Gaps = 31/233 (13%)
Query: 5 LNNNNLTYLPDG---VFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLG------ 54
L+ NNLT L + L T + N +CDC L WL W ++ G
Sbjct: 486 LSVNNLTTLSQDEVEIAYNLLSKPTFNLVYNPLVCDCKLEWLKDWYDGKFKDTGTLPTFQ 545
Query: 55 --LYTKCFAPSHIKGQNILDIPEHEFKCSGPVEKPTGE---------CAAEPSCPHPCRC 103
L C +P + I + EF C EK + C + +CP C+C
Sbjct: 546 TTLTYGCISPLYSTKMPITSLRSDEFLCH--YEKHCDKTCVCCDYDVCHCKYTCPSSCQC 603
Query: 104 ADG-------IVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLS 156
G V C L VP +PE T LRL+ N++ L +F + + L+
Sbjct: 604 YIGDKFLNIHQVHCFNANLTDVPGKIPEGATLLRLDGNNLPSLREHSFLGLTHVVDLYLN 663
Query: 157 KNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFI 209
+ I V + F+G+KS+ SL LNNN LT + GVF+ L L + + +N+FI
Sbjct: 664 NSHIHTVENNTFKGMKSVRSLFLNNNLLTIISPGVFSGLENLERIFL-QNNFI 715
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 119/304 (39%), Gaps = 56/304 (18%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L+L N IT L + L +D+S N I +++ F+ L +L + L+ NNLT L
Sbjct: 438 LQLSYNKITTLLRNQLP--RSLETLDISNNNIHQISSHTFKTLSNLRYVDLSVNNLTTLS 495
Query: 189 DG---VFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLG--------LYTKCFAP 236
+ L T + N +CDC L WL W ++ G L C +P
Sbjct: 496 QDEVEIAYNLLSKPTFNLVYNPLVCDCKLEWLKDWYDGKFKDTGTLPTFQTTLTYGCISP 555
Query: 237 SHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCP 296
+ I + EF C Y + C +C V C + +CP
Sbjct: 556 LYSTKMPITSLRSDEFLCH----------YEKHCD------KTC-VCCDYDVCHCKYTCP 598
Query: 297 HPCRCADG-------IVDCREKGLNKVPILLPEATT-------------ELTYMVSIDRV 336
C+C G V C L VP +PE T E +++ V
Sbjct: 599 SSCQCYIGDKFLNIHQVHCFNANLTDVPGKIPEGATLLRLDGNNLPSLREHSFLGLTHVV 658
Query: 337 DKVLLYSYI----SNNFKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITEL 391
D L S+I +N FK + RS L N +T + P F+ + L RI L+ N I+ +
Sbjct: 659 DLYLNNSHIHTVENNTFKGMKSVRSLFLNNNLLTIISPGVFSGLENLERIFLQNNFISLI 718
Query: 392 PPKA 395
P+A
Sbjct: 719 DPQA 722
>gi|410956486|ref|XP_003984873.1| PREDICTED: G-protein coupled receptor 124 [Felis catus]
Length = 1218
Score = 80.5 bits (197), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/131 (33%), Positives = 67/131 (51%), Gaps = 1/131 (0%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L L N I+ + P AF L+R+DLS N+I + + FQGL L L ++ N + L
Sbjct: 73 KLDLRNNVISTVHPGAFLGLGELKRLDLSNNRIGCLTSETFQGLPRLLRLNISGNIFSSL 132
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTKCFAPSHIKGQNILD 246
GVF EL L+ + + CDC L WL W + R +L +T C P + Q +
Sbjct: 133 QPGVFDELPALKVVDLGTEYLTCDCRLRWLLSWARNRSLQLSEHTLCAYPGALHAQALGG 192
Query: 247 IPEHEFKCSGS 257
+ E + +C G+
Sbjct: 193 LQEAQLRCEGA 203
Score = 49.3 bits (116), Expect = 0.004, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 1 MPRTL----NNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGL 55
+PR L + N + L GVF EL L+ + + CDC L WL W + R +L
Sbjct: 116 LPRLLRLNISGNIFSSLQPGVFDELPALKVVDLGTEYLTCDCRLRWLLSWARNRSLQLSE 175
Query: 56 YTKCFAPSHIKGQNILDIPEHEFKCSGPVE 85
+T C P + Q + + E + +C G +E
Sbjct: 176 HTLCAYPGALHAQALGGLQEAQLRCEGALE 205
>gi|126507770|gb|ABO15157.1| variable lymphocyte receptor B diversity region [Petromyzon
marinus]
Length = 173
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 9/169 (5%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C E+ L VP +P T L L N IT+L P F + LR + L
Sbjct: 1 ACPSQCSCSGTQVNCHERRLASVPAGIPTTTQVLGLSSNQITKLEPGVFDSLANLRELHL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
NQ+ + F L LT L L NN L +P G F L L + + N + C C +
Sbjct: 61 WGNQLVSLPPGVFDKLTQLTHLELQNNQLKSIPRGTFDNLKSLTHVWLHTNPWDCQCTDI 120
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L W+ ++ + + G + + P++ KCSG++ R+
Sbjct: 121 LYLSGWVAQHSGI-------VRGNWDGSSYVVNPDN-VKCSGTNTPVRA 161
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKV--LLYSYISNNFKR 351
+CP C C+ V+C E+ L VP +P TT +S +++ K+ ++ ++N
Sbjct: 1 ACPSQCSCSGTQVNCHERRLASVPAGIP--TTTQVLGLSSNQITKLEPGVFDSLAN---- 54
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
R L N + LPP F +L + L+ N + +P F N K L +
Sbjct: 55 --LRELHLWGNQLVSLPPGVFDKLTQLTHLELQNNQLKSIPRGTFDNLKSLTHV 106
>gi|149411244|ref|XP_001514779.1| PREDICTED: peroxidasin homolog (Drosophila)-like [Ornithorhynchus
anatinus]
Length = 1469
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 88/210 (41%), Gaps = 52/210 (24%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYK------- 148
+CP C C G V C L+ +P P+ T L + N I E+P +F K
Sbjct: 23 ACPSRCLCFKGTVRCMHLMLDHLP-RGPQTTAVLDVRFNRIQEIPANSFKKLKNLNTLLL 81
Query: 149 ---RLRRID--------------LSKNQISKVAVDAFQGLKSLTSLT------------- 178
++RRI L KN+I V AF+GL SL L
Sbjct: 82 NNNQIRRISRNAFEGLENLLYLYLYKNEIHTVHPQAFKGLISLEQLYIHFNQIEALHSET 141
Query: 179 -----------LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL 227
L+NN L+ +P G+F+ L LR LR+ N+ +CDC L WL +K Y R
Sbjct: 142 FRDLPKLERLFLHNNKLSKVPAGIFSHLDSLRRLRLDSNALVCDCDLMWLGELIKDYDRS 201
Query: 228 G---LYTKCFAPSHIKGQNILDIPEHEFKC 254
G + C +P +G+ I + EF C
Sbjct: 202 GHTQVAATCDSPRRFQGRTIASLTVEEFNC 231
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLG---LYTKCFA 61
L+NN L+ +P G+F+ L LR LR+ N+ +CDC L WL +K Y R G + C +
Sbjct: 153 LHNNKLSKVPAGIFSHLDSLRRLRLDSNALVCDCDLMWLGELIKDYDRSGHTQVAATCDS 212
Query: 62 PSHIKGQNILDIPEHEFKCSGP 83
P +G+ I + EF C P
Sbjct: 213 PRRFQGRTIASLTVEEFNCESP 234
>gi|126507860|gb|ABO15202.1| variable lymphocyte receptor B diversity region [Petromyzon
marinus]
Length = 192
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 81/193 (41%), Gaps = 38/193 (19%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C++K L VP +P T L L N IT+L P F + +L +DL
Sbjct: 1 ACPSQCSCSGTEVHCQKKSLASVPAGIPTTTQVLYLHVNQITKLEPGVFDSLTQLTYLDL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFIC----- 210
+ NQ++ + V L LT L LN N L LP G+F L L+ +S N
Sbjct: 61 APNQLTALPVGVLDSLTQLTGLDLNRNQLQALPTGMFDRLGNLQRFDLSRNQLKSIPRGA 120
Query: 211 -----------------DCHLS---WLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEH 250
DC S +L RW+ ++P L L++
Sbjct: 121 FDNLKGLTHIYLHNNPWDCACSDILYLSRWISQHPGLVF-------------GYLNLDPD 167
Query: 251 EFKCSGSSMETRS 263
+CSG++ R+
Sbjct: 168 SARCSGTNTPVRA 180
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V C++K L VP +P TT++ Y+ ++++ K L + ++ + T
Sbjct: 1 ACPSQCSCSGTEVHCQKKSLASVPAGIP-TTTQVLYL-HVNQITK--LEPGVFDSLTQLT 56
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N +T LP + +L + L +N + LP F L+R
Sbjct: 57 YLD--LAPNQLTALPVGVLDSLTQLTGLDLNRNQLQALPTGMFDRLGNLQRF 106
>gi|76161687|gb|ABA39940.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 172
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDCR + VP +P T +L L N IT+L P F + L+ + L
Sbjct: 1 ACPSQCSCSGTSVDCRSRRHASVPAGIPTTTRDLYLHDNQITKLEPGVFDSLVNLQTLYL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
+N++ + V F L L+ L ++ N L +P GVF L L + + +N + C C +
Sbjct: 61 HQNELGALPVGVFDNLTQLSILNMHTNQLKSIPRGVFDNLKSLTHIWLYDNPWDCACSDI 120
Query: 215 SWLHRWLKRYPRL 227
+L W+ ++P +
Sbjct: 121 LYLGLWISQHPGV 133
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTEL-TYMVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ VDCR + VP +P T +L + I +++ + S ++
Sbjct: 1 ACPSQCSCSGTSVDCRSRRHASVPAGIPTTTRDLYLHDNQITKLEPGVFDSLVN------ 54
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ L QN++ LP F N +L + + N + +P F N K L +
Sbjct: 55 -LQTLYLHQNELGALPVGVFDNLTQLSILNMHTNQLKSIPRGVFDNLKSLTHI 106
>gi|76162041|gb|ABA40105.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 161
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 66/130 (50%), Gaps = 1/130 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C K L VP +P T L L N IT+L P F L+++ L
Sbjct: 1 ACPSQCSCSGTHVNCERKRLTSVPAGIPTTTQVLYLHVNQITKLEPGVFDRLVNLQKLYL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ+S + V F L LT+L L+NN L +P G F L L + + N + C C +
Sbjct: 61 WGNQLSALPVGVFDKLTQLTNLYLHNNQLKSIPRGAFDNLKSLTHIWLFGNPWDCACSDI 120
Query: 215 SWLHRWLKRY 224
+L WL ++
Sbjct: 121 LYLSGWLGQH 130
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C K L VP +P TT++ Y+ ++++ K+ F R
Sbjct: 1 ACPSQCSCSGTHVNCERKRLTSVPAGIP-TTTQVLYL-HVNQITKLE-----PGVFDRLV 53
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N + L N ++ LP F +L + L N + +P AF N K L +
Sbjct: 54 NLQKLYLWGNQLSALPVGVFDKLTQLTNLYLHNNQLKSIPRGAFDNLKSLTHI 106
>gi|76161901|gb|ABA40042.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 218
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 58/113 (51%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C++K L VP +P T L L N IT+L P F L+R+ L
Sbjct: 1 ACPSQCSCSGTEVHCQKKSLASVPAGIPTTTQVLYLHVNQITKLEPGVFDRLVNLQRLHL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
+NQ+ + F L LT L L NN LT LP GVF L L+ L + N F
Sbjct: 61 DQNQLVSLPAGVFDRLTQLTRLDLYNNQLTVLPAGVFDRLGNLQELYMCCNKF 113
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V C++K L VP +P TT++ Y+ ++++ K+ F R
Sbjct: 1 ACPSQCSCSGTEVHCQKKSLASVPAGIP-TTTQVLYL-HVNQITKL-----EPGVFDRLV 53
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R L+QN + LP F +L R+ L N +T LP F L+ +
Sbjct: 54 NLQRLHLDQNQLVSLPAGVFDRLTQLTRLDLYNNQLTVLPAGVFDRLGNLQEL 106
>gi|311272379|ref|XP_003133414.1| PREDICTED: G-protein coupled receptor 124 [Sus scrofa]
Length = 1337
Score = 80.5 bits (197), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/131 (33%), Positives = 68/131 (51%), Gaps = 1/131 (0%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
+L L N I+ + P AF L+R+DLS N+I ++ + FQG+ L L ++ N + L
Sbjct: 111 KLDLRNNVISTVQPGAFLGLGELKRLDLSNNRIGCLSSETFQGIPKLLRLNISGNIFSRL 170
Query: 188 PDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTKCFAPSHIKGQNILD 246
GVF EL L+ + CDC L WL W + R +L T C PS ++ Q +
Sbjct: 171 QPGVFDELPALKVVDFGTEFLTCDCRLHWLLPWARNRSLQLSERTLCAYPSALRAQALGG 230
Query: 247 IPEHEFKCSGS 257
+ E + +C G+
Sbjct: 231 LQEAQLRCEGA 241
Score = 48.1 bits (113), Expect = 0.007, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLK-RYPRLGLYTKCFAPS 63
++ N + L GVF EL L+ + CDC L WL W + R +L T C PS
Sbjct: 162 ISGNIFSRLQPGVFDELPALKVVDFGTEFLTCDCRLHWLLPWARNRSLQLSERTLCAYPS 221
Query: 64 HIKGQNILDIPEHEFKCSGPVE 85
++ Q + + E + +C G +E
Sbjct: 222 ALRAQALGGLQEAQLRCEGALE 243
>gi|91076474|ref|XP_972312.1| PREDICTED: similar to toll [Tribolium castaneum]
gi|270002908|gb|EEZ99355.1| toll-7-like protein [Tribolium castaneum]
Length = 1321
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 91/202 (45%), Gaps = 26/202 (12%)
Query: 29 ISENSFICDCHLSWLHRW-----LKRYPR-LGLYTKCFAPSHIKG---QNILDIPEHEFK 79
I N F CDC + WL R L++YP+ L L T +H +G Q +L + +F
Sbjct: 683 IGGNPFYCDCKMEWLLRINHLSNLRQYPQVLDLDTVTCELAHARGSPPQPLLSLKPSQFL 742
Query: 80 CSGPVEK---------PTGECAAEPSCPHPCRC------ADGIVDCREKGLNKVPILLPE 124
C P + C E +CP C C + +VDC G VP +P
Sbjct: 743 C--PYKSHCFALCHCCEFDACDCEMTCPTNCTCFHDHTWSSNVVDCSNAGYTNVPEKIPM 800
Query: 125 ATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNL 184
TE+ L+ N++ EL F K+L + L+ + ++ V F G+KSL L + NNNL
Sbjct: 801 DATEIYLDGNNLGELGSHVFIGKKKLEVLFLNNSNVNAVHNRTFNGVKSLKVLHMENNNL 860
Query: 185 TYLPDGVFAELFRLRTLRISEN 206
L F +L +L L + N
Sbjct: 861 EELRGFEFDQLEKLNELYLDHN 882
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 120/299 (40%), Gaps = 57/299 (19%)
Query: 122 LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNN 181
+P++ L L N IT + P F L+++ L N I + + A SL++++ +
Sbjct: 621 IPDSVETLFLNNNKITNVHPNTFVKKIHLQKVVLYGNDIKYLDIAAL----SLSTVSDDK 676
Query: 182 NNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRW-----LKRYPR-LGLYTKCFA 235
+ L I N F CDC + WL R L++YP+ L L T
Sbjct: 677 D---------------LPQFYIGGNPFYCDCKMEWLLRINHLSNLRQYPQVLDLDTVTCE 721
Query: 236 PSHIKG---QNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAE 292
+H +G Q +L + +F C Y+ C F + C + C E
Sbjct: 722 LAHARGSPPQPLLSLKPSQFLCP----------YKSHC---FALCHCCEFDA----CDCE 764
Query: 293 PSCPHPCRC------ADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYIS 346
+CP C C + +VDC G VP +P TE + +D + L S++
Sbjct: 765 MTCPTNCTCFHDHTWSSNVVDCSNAGYTNVPEKIPMDATE----IYLDGNNLGELGSHVF 820
Query: 347 NNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
K+ L +++ + + F K L+ + +E N++ EL F ++L +
Sbjct: 821 IGKKKL--EVLFLNNSNVNAVHNRTFNGVKSLKVLHMENNNLEELRGFEFDQLEKLNEL 877
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 116 NKVPILLP------EATTELRLEQNDITE--LPPKAFANYKRLRRIDLSKNQISKVAVDA 167
N + +L P + T L L +N+++ + FA RL ++L+ NQ++++ +
Sbjct: 300 NSLSVLAPGLLEGLDQLTVLDLSRNELSSHWVNRDTFAGLVRLVVLNLAHNQLTRIDANL 359
Query: 168 FQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISEN 206
F L +L L L NN + ++ DG F+EL L L ++ N
Sbjct: 360 FHDLYTLQILNLENNQIEFIADGAFSELKNLHALTLTHN 398
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%)
Query: 128 ELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYL 187
EL L+ N ++ L +AF L ++LS N + + + FQ + L L L+NN+L+ L
Sbjct: 246 ELHLQDNAVSTLGDRAFVGLTSLHTLNLSSNCLVALPPELFQSSRDLKHLYLHNNSLSVL 305
Query: 188 PDGVFAELFRLRTLRISENSF 208
G+ L +L L +S N
Sbjct: 306 APGLLEGLDQLTVLDLSRNEL 326
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 94/243 (38%), Gaps = 36/243 (14%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L NN + ++ DG F+EL L L ++ N FI ++ Y G+Y
Sbjct: 371 LENNQIEFIADGAFSELKNLHALTLTHN-FITR---------IEAYHFSGMYAL------ 414
Query: 65 IKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCR-----EKGLNKVP 119
Q +LD + E+ E T + GI R + G N +
Sbjct: 415 --NQLLLDSNKIEYIHPQTFENVTNLQDLGLNGNMLGGVPVGIGKLRFLKTLDLGKNHIE 472
Query: 120 IL------LPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKS 173
I+ ++ LRL N I + AF+ L+ ++L+ N+I V AF +
Sbjct: 473 IVNNSSFEGLDSLYGLRLVDNHIVNISRDAFSTLPSLQVLNLASNKIKYVEQSAFASNPT 532
Query: 174 LTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFI------CDCHLSWLHRWLKRYPRL 227
L ++ L+ N L+ + GVF L L L +S N + L WL + L
Sbjct: 533 LKAIRLDANELSDI-SGVFTNLQSLVWLNVSSNKLLWFDFSHLPSSLEWLDMHDNKITEL 591
Query: 228 GLY 230
G Y
Sbjct: 592 GNY 594
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLT--Y 186
L L N + LPP+ F + + L+ + L N +S +A +GL LT L L+ N L+ +
Sbjct: 271 LNLSSNCLVALPPELFQSSRDLKHLYLHNNSLSVLAPGLLEGLDQLTVLDLSRNELSSHW 330
Query: 187 LPDGVFAELFRLRTLRISENSF 208
+ FA L RL L ++ N
Sbjct: 331 VNRDTFAGLVRLVVLNLAHNQL 352
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L L N +T + F + L+ ++L NQI +A AF LK+L +LTL +N +T +
Sbjct: 345 LNLAHNQLTRIDANLFHDLYTLQILNLENNQIEFIADGAFSELKNLHALTLTHNFITRIE 404
Query: 189 DGVFAELFRLRTLRISEN 206
F+ ++ L L + N
Sbjct: 405 AYHFSGMYALNQLLLDSN 422
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
L LE N I + AF+ K L + L+ N I+++ F G+ +L L L++N + Y+
Sbjct: 369 LNLENNQIEFIADGAFSELKNLHALTLTHNFITRIEAYHFSGMYALNQLLLDSNKIEYIH 428
Query: 189 DGVFAELFRLRTLRISEN 206
F + L+ L ++ N
Sbjct: 429 PQTFENVTNLQDLGLNGN 446
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 12/98 (12%)
Query: 125 ATTELRLEQNDITELPPKAFANYKR------------LRRIDLSKNQISKVAVDAFQGLK 172
+ T L L N + L F+++ L +DLS N I + + GL+
Sbjct: 183 SLTHLNLTMNKLQNLSALGFSDWGNGPLAPGRACVSGLEILDLSHNDIIALPDNGLSGLR 242
Query: 173 SLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFIC 210
SL L L +N ++ L D F L L TL +S N +
Sbjct: 243 SLEELHLQDNAVSTLGDRAFVGLTSLHTLNLSSNCLVA 280
>gi|443694348|gb|ELT95511.1| hypothetical protein CAPTEDRAFT_132345, partial [Capitella teleta]
Length = 334
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 81/207 (39%), Gaps = 49/207 (23%)
Query: 95 PSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRID 154
CP C C V C GLN +P + TT L L N I LP F N +L +
Sbjct: 23 AQCPDQCICFSTTVRCMFLGLNSMPDDVSTDTTILDLRFNKIKSLPRGLFRNLHKLDTLL 82
Query: 155 LSKNQISKVAVDAFQGLKSLTSLTL----------------------------------- 179
L+ NQI + AF+GL SL +L L
Sbjct: 83 LNNNQIQAIDDGAFEGLDSLKTLFLYKNEIASIQEGAFHNLRNLEQLYIHFNQLTSLEAR 142
Query: 180 -------------NNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPR 226
NN + +LP G+F +L L+ LR+ N+ ICDC + WL + L+
Sbjct: 143 TFENLQKLERLFLQNNAIQHLPFGIFDDLKGLKRLRLDSNALICDCEMFWLSKMLRENGA 202
Query: 227 LG-LYTKCFAPSHIKGQNILDIPEHEF 252
+ C PS ++G + + E +F
Sbjct: 203 VADSAIVCRGPSDMEGMAVASLQEQDF 229
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLG-LYTKCFAPS 63
L NN + +LP G+F +L L+ LR+ N+ ICDC + WL + L+ + C PS
Sbjct: 155 LQNNAIQHLPFGIFDDLKGLKRLRLDSNALICDCEMFWLSKMLRENGAVADSAIVCRGPS 214
Query: 64 HIKGQNILDIPEHEF-KCSGPVEKPTGECAAEPS 96
++G + + E +F +C P E AEP+
Sbjct: 215 DMEGMAVASLQEQDFLECKMP------EFTAEPT 242
>gi|76161761|gb|ABA39977.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 168
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C K L VP +P T L L N IT+L P F L+++ L
Sbjct: 1 ACPSQCSCSGTEVNCAGKSLASVPAGIPTTTRVLHLNSNQITKLEPGVFGRLVNLQQLYL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ+ + V F L LT L L+ N L +P G F L L + + N + C+C +
Sbjct: 61 GSNQLGALPVGVFDKLTQLTRLALSTNQLKSIPRGAFDNLKSLTHIWLFGNPWDCECSDI 120
Query: 215 SWLHRWLKRYPRL 227
+L W+ ++ +
Sbjct: 121 LYLKNWIVQHASI 133
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C K L VP +P TT ++ +++ K+ F R
Sbjct: 1 ACPSQCSCSGTEVNCAGKSLASVPAGIP--TTTRVLHLNSNQITKLE-----PGVFGRLV 53
Query: 354 N-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N + L N + LP F +L R+ L N + +P AF N K L +
Sbjct: 54 NLQQLYLGSNQLGALPVGVFDKLTQLTRLALSTNQLKSIPRGAFDNLKSLTHI 106
>gi|70955634|gb|AAZ16378.1| variable lymphocyte receptor B [Eptatretus stoutii]
Length = 275
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 77/182 (42%), Gaps = 19/182 (10%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+CR K P +P TT L L+ N + +P F +L R++L
Sbjct: 23 ACPSRCSCSGTTVNCRSKSFTSFPSGIPSRTTVLYLDINKLQSIPSGVFDKLTQLTRLEL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF------- 208
+NQ+ + F L L L L N L LP GVF +L +L TL + +N
Sbjct: 83 DRNQLKSLPHGVFDKLTQLKELWLGTNQLQSLPHGVFDKLTQLTTLYLYQNQLKSVPDGI 142
Query: 209 ---ICDCHLSWLHR--WLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+ WLH W PR+ ++ + K Q KCSGS RS
Sbjct: 143 FDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQG-------SAKCSGSGKPVRS 195
Query: 264 KI 265
I
Sbjct: 196 II 197
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 48/113 (42%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+CR K P +P TT L +D L S S F + T
Sbjct: 23 ACPSRCSCSGTTVNCRSKSFTSFPSGIPSRTTVL-------YLDINKLQSIPSGVFDKLT 75
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+R L++N + LP F +L+ + L N + LP F +L +
Sbjct: 76 QLTRLELDRNQLKSLPHGVFDKLTQLKELWLGTNQLQSLPHGVFDKLTQLTTL 128
>gi|76162174|gb|ABA40164.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 168
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 14/169 (8%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ + C E+ L VP+ +P T LRL +N IT+L P F + L ++L
Sbjct: 1 ACPSQCSCSGTDIHCHERSLRSVPVGIPTTTQILRLYRNQITKLEPGVFDSLAALTFLNL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ++ + F L +L L L+ N L +P G F L L + + N + C+C +
Sbjct: 61 GNNQLTALPAGVFDRLGNLQKLWLHRNQLKSIPRGAFDNLKSLTNIFLYNNPWDCECSDI 120
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L W+ ++ + PS G + KCSG++ R+
Sbjct: 121 LYLKNWIVQHASI------VNPSGHGGVD-------NVKCSGTNTPVRA 156
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTEL-TYMVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ + C E+ L VP+ +P T L Y I +++ + S + F
Sbjct: 1 ACPSQCSCSGTDIHCHERSLRSVPVGIPTTTQILRLYRNQITKLEPGVFDSLAALTF--- 57
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N +T LP F L+++ L +N + +P AF N K L +
Sbjct: 58 ----LNLGNNQLTALPAGVFDRLGNLQKLWLHRNQLKSIPRGAFDNLKSLTNI 106
>gi|395838840|ref|XP_003792314.1| PREDICTED: leucine-rich repeat-containing G-protein coupled
receptor 6 [Otolemur garnettii]
Length = 963
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 67/131 (51%), Gaps = 7/131 (5%)
Query: 80 CSGPVEKPTGECAAEPSCPHPCRCA-DGIV---DCREKGLNKVPILLPEATTELRLEQND 135
C+G +P A CP PC C DGI+ DC E GL+ VP L T L L N+
Sbjct: 21 CAGDAPQPGPGPAV---CPAPCHCQEDGIMLSADCSELGLSVVPGDLDSLTAYLDLSMNN 77
Query: 136 ITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAEL 195
+TEL P F + + L + LS N +S + AF GL SL L L NN L +P EL
Sbjct: 78 LTELQPGLFHHLRFLEELRLSGNHLSHIPGQAFSGLYSLKILMLQNNQLGGIPAEALWEL 137
Query: 196 FRLRTLRISEN 206
L++LR+ N
Sbjct: 138 PSLQSLRLDAN 148
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 113/283 (39%), Gaps = 47/283 (16%)
Query: 121 LLPEATTE-------LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKS 173
L+PE + E L L+ N +TE+P +A N L+ + L+ N+IS + AFQ L S
Sbjct: 152 LVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRISHIPDYAFQNLTS 211
Query: 174 LTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKC 233
L L L+NN++ +L F L L TL ++ N R L R LG +
Sbjct: 212 LVVLHLHNNHIQHLGTHSFEGLHNLETLDLNYNELQ---EFPVAIRTLGRLQELGFHNN- 267
Query: 234 FAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEP 293
NI IPE F G+ + Y P++ G A +
Sbjct: 268 ---------NIKAIPEKAFM--GNPLLQTIHFYDN------------PIQF-VGRSAFQY 303
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+G D +E P L + TT L ++++ R LL S + +
Sbjct: 304 LPKLHTLSLNGATDIQE-----FPDL--KGTTSLE-ILTLTRAGIQLLPSGMCQQLPKL- 354
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAF 396
R L N I ELP + ++L I L+ N I E+ F
Sbjct: 355 -RVLELSHNQIEELP--SLHRCQKLEEIGLQHNCIWEIGADTF 394
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 129 LRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLP 188
LRL+ N I+ +P ++F LR + L N ++++ V A L +L ++TL N ++++P
Sbjct: 143 LRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRISHIP 202
Query: 189 DGVFAELFRLRTLRISEN 206
D F L L L + N
Sbjct: 203 DYAFQNLTSLVVLHLHNN 220
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 80/205 (39%), Gaps = 33/205 (16%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
L+ N+L+++P F+ L+ L+ L + N L P L+ S
Sbjct: 97 LSGNHLSHIPGQAFSGLYSLKILMLQNNQ-------------LGGIPAEALWELPSLQSL 143
Query: 65 IKGQNILD-IPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
N++ +PE F+ S H + + + + LN +P
Sbjct: 144 RLDANLISLVPERSFE-------------GLSSLRHLWLDDNALTEIPVRALNNLP---- 186
Query: 124 EATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNN 183
A + L N I+ +P AF N L + L N I + +F+GL +L +L LN N
Sbjct: 187 -ALQAMTLALNRISHIPDYAFQNLTSLVVLHLHNNHIQHLGTHSFEGLHNLETLDLNYNE 245
Query: 184 LTYLPDGVFAELFRLRTLRISENSF 208
L P + L RL+ L N+
Sbjct: 246 LQEFPVAI-RTLGRLQELGFHNNNI 269
>gi|170057353|ref|XP_001864446.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167876768|gb|EDS40151.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 452
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 80/160 (50%), Gaps = 27/160 (16%)
Query: 121 LLPEATTELRLEQNDITELPPKAFA----------NYKRLRRID--------------LS 156
L+P +++LR N I E+P AFA N +LRRI+ L+
Sbjct: 19 LIPSPSSDLRY--NHIREVPTDAFAGLSHLHTVFLNENQLRRIEPGAFRGLLGLKYLYLN 76
Query: 157 KNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSW 216
KN+I +VA AF L L SL L N + +P+G FA L L+ LR+ +N CDC L W
Sbjct: 77 KNRIVEVAPSAFDSLDRLQSLFLYGNQIRRIPEGAFAGLPALKRLRLDDNPLECDCSLLW 136
Query: 217 LHRWLKRYPRLGLYT-KCFAPSHIKGQNILDIPEHEFKCS 255
R L ++ L T C P + G+++ D+ E +F C+
Sbjct: 137 FRRVLHEARQMLLATSSCATPEQLVGKSLADLGEDDFHCT 176
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 7/137 (5%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYT-KCFAPS 63
L N + +P+G FA L L+ LR+ +N CDC L W R L ++ L T C P
Sbjct: 99 LYGNQIRRIPEGAFAGLPALKRLRLDDNPLECDCSLLWFRRVLHEARQMLLATSSCATPE 158
Query: 64 HIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLP 123
+ G+++ D+ E +F C+ P E +EP + C+ G + I+
Sbjct: 159 QLVGKSLADLGEDDFHCTKP------EIVSEPRDIEISNGQTAVFTCKAHGDPRPEIVWM 212
Query: 124 EATTELRLEQNDITELP 140
E+ + I LP
Sbjct: 213 LDAGEIHSDDTRINVLP 229
>gi|50086827|gb|AAT70294.1| variable lymphocyte receptor [Petromyzon marinus]
Length = 166
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 64/131 (48%), Gaps = 1/131 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C V C + L VP +P L L N IT+L P F L+++ +
Sbjct: 9 ACPSQCSCDQTTVKCHSRRLTSVPAGIPTNVQILNLYNNQITKLEPGVFDRLVNLQQLYI 68
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
S NQ+ + F L LT L+L NN L +P G F L L + +S N + C C +
Sbjct: 69 SWNQLQALPTGVFNKLTQLTHLSLYNNQLKSIPRGAFDNLKSLTHIWLSSNPWDCACSDI 128
Query: 215 SWLHRWLKRYP 225
+L RW+ ++P
Sbjct: 129 LYLSRWISQHP 139
>gi|76161823|gb|ABA40008.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 168
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 81/169 (47%), Gaps = 14/169 (8%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ VDCR + VP +P T +L L N IT+L P F + +L + L
Sbjct: 1 ACPSQCSCSGTSVDCRSRRHASVPAGIPTTTRDLYLHDNQITKLEPGVFDSLTQLTTLYL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
S NQ++ + F+ L L L L NN L +P G F L L + + N + C+C +
Sbjct: 61 SNNQLTALPAGVFERLVKLQVLGLYNNPLKSIPRGAFDNLKSLTHIWLFGNPWDCECSDI 120
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L W+ ++ + +++G +D KCSG++ R+
Sbjct: 121 LYLKNWIVQHASI---------VNLQGHGGVD----NVKCSGTNTPVRA 156
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ VDCR + VP +P T +L + +++ K L + ++ + T
Sbjct: 1 ACPSQCSCSGTSVDCRSRRHASVPAGIPTTTRDL--YLHDNQITK--LEPGVFDSLTQLT 56
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ L N +T LP F +L+ + L N + +P AF N K L +
Sbjct: 57 --TLYLSNNQLTALPAGVFERLVKLQVLGLYNNPLKSIPRGAFDNLKSLTHI 106
>gi|348516328|ref|XP_003445691.1| PREDICTED: leucine-rich repeat LGI family member 3-like
[Oreochromis niloticus]
Length = 550
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 81/209 (38%), Gaps = 26/209 (12%)
Query: 95 PSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRL----------------------- 131
P CP C C C + +P P L +
Sbjct: 38 PRCPATCSCTKDSAFCVDT--KAIPKSFPPGIISLTMVNAAFTTIPEGAFSHLHLLQFLL 95
Query: 132 -EQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDG 190
N T + AFA L+ + + N I ++ F+GLKSLT L+L+NNNL LP
Sbjct: 96 LNSNTFTTIADDAFAGLAHLQYLFIENNDIQALSKHTFRGLKSLTHLSLSNNNLQQLPRE 155
Query: 191 VFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEH 250
+F L L L + NSF CDC + WL W+++ C +P +G+ I D+
Sbjct: 156 LFKHLDILTDLDLRGNSFRCDCKIKWLVDWMEKTNTSVPAIYCASPFEFQGRRIRDLTPR 215
Query: 251 EFKCSGSSMETRSKIYREECSTDFHPYNS 279
+F C + S + + +N
Sbjct: 216 DFNCISADFAVYETFPFHSVSVESYEFNG 244
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%)
Query: 4 TLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPS 63
+L+NNNL LP +F L L L + NSF CDC + WL W+++ C +P
Sbjct: 143 SLSNNNLQQLPRELFKHLDILTDLDLRGNSFRCDCKIKWLVDWMEKTNTSVPAIYCASPF 202
Query: 64 HIKGQNILDIPEHEFKC 80
+G+ I D+ +F C
Sbjct: 203 EFQGRRIRDLTPRDFNC 219
>gi|76162235|gb|ABA40191.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 168
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 14/169 (8%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDCR K + VP +P L L N IT+L P F + L+++ L
Sbjct: 1 ACPSQCSCDQTTVDCRNKRFSSVPAGIPTDRQNLWLNNNQITKLEPGVFDSLVNLQKLWL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
+ NQ++ + F L +L +L L+NN L +P G F L L + + N + C+C +
Sbjct: 61 NSNQLTSLPAGVFDRLVNLQTLDLHNNQLKSIPRGAFDNLKSLTYIWLHNNPWDCECSDI 120
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L W+ ++ + ++ G +D KCSG++ R+
Sbjct: 121 LYLKNWIVQHASI---------VNLWGYGGVD----NVKCSGTNTPVRA 156
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 10/111 (9%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKV--LLYSYISNNFKR 351
+CP C C VDCR K + VP +P T ++ +++ K+ ++ + N K
Sbjct: 1 ACPSQCSCDQTTVDCRNKRFSSVPAGIP--TDRQNLWLNNNQITKLEPGVFDSLVNLQKL 58
Query: 352 WTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
W L N +T LP F L+ + L N + +P AF N K L
Sbjct: 59 W------LNSNQLTSLPAGVFDRLVNLQTLDLHNNQLKSIPRGAFDNLKSL 103
>gi|260797633|ref|XP_002593806.1| hypothetical protein BRAFLDRAFT_214727 [Branchiostoma floridae]
gi|229279036|gb|EEN49817.1| hypothetical protein BRAFLDRAFT_214727 [Branchiostoma floridae]
Length = 492
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 6/187 (3%)
Query: 107 IVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVD 166
I+ L VP + +L L +N I + F N +L+ + L+ ++ V
Sbjct: 156 ILGLDSNQLESVPCQAIQRLQQLDLSRNPIHVIETNTFLNLTKLKHLILNHMKLETVQEG 215
Query: 167 AFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKR--- 223
AF GL L L + +N L LP +F+ L L+ + + EN + CDC+L WL W +
Sbjct: 216 AFSGLGLLEILEMRDNRLQTLPVNLFSALTSLQIIELWENRWRCDCNLRWLKEWSESEYH 275
Query: 224 --YPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS-KIYREECSTDFHPYNSC 280
Y + KC P H++ + ++ +F C SM T S I +E + P N+
Sbjct: 276 FFYNNMAFRVKCNTPDHMRDKYFAELAPDDFMCVKPSMYTLSFNITVDEWTNAVLPCNAS 335
Query: 281 PVEKPTG 287
PTG
Sbjct: 336 GFPPPTG 342
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 64/141 (45%), Gaps = 27/141 (19%)
Query: 96 SCPHPCRCAD-GIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRID 154
SCP PC C+ VDC K L ++P LP + L L++N +TEL F RL +D
Sbjct: 1 SCPSPCTCSTINEVDCGNKNLQEIPEPLPTESERLYLQRNKLTELANDQFVTVTRLEALD 60
Query: 155 LSKNQISKVAVDAF--------------------------QGLKSLTSLTLNNNNLTYLP 188
LS N IS + AF +GL SL L L++N + +P
Sbjct: 61 LSYNAISDIKPGAFNGLTNLNLQILHLYYNKLENVPWQSLRGLTSLVELNLHSNLILAVP 120
Query: 189 DGVFAELFRLRTLRISENSFI 209
F++L L+ L ++ N +
Sbjct: 121 ANSFSDLRELQNLYLNSNKIV 141
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKR-----YPRLGLYTKC 59
+ +N L LP +F+ L L+ + + EN + CDC+L WL W + Y + KC
Sbjct: 228 MRDNRLQTLPVNLFSALTSLQIIELWENRWRCDCNLRWLKEWSESEYHFFYNNMAFRVKC 287
Query: 60 FAPSHIKGQNILDIPEHEFKCSGP 83
P H++ + ++ +F C P
Sbjct: 288 NTPDHMRDKYFAELAPDDFMCVKP 311
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 41/110 (37%), Gaps = 31/110 (28%)
Query: 294 SCPHPCRCAD-GIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRW 352
SCP PC C+ VDC K L ++P LP + L
Sbjct: 1 SCPSPCTCSTINEVDCGNKNLQEIPEPLPTESERL------------------------- 35
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRL 402
L++N +TEL F RL + L N I+++ P AF L
Sbjct: 36 -----YLQRNKLTELANDQFVTVTRLEALDLSYNAISDIKPGAFNGLTNL 80
>gi|76162045|gb|ABA40107.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 161
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C VDCR K + VP +P L L N IT+L P F L+R+ L
Sbjct: 1 ACPSQCSCDQTTVDCRNKRFSSVPAGIPTDRQNLWLNNNQITKLEPGVFDRLVNLQRLYL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
++NQ+ + F L LT L+L NN L +P G F L L + + N + C C +
Sbjct: 61 NQNQLQALPTGVFNKLTQLTHLSLYNNQLKSIPRGAFDNLKSLTHIWLFGNPWDCACSDI 120
Query: 215 SWLHRWLKRY 224
+L WL ++
Sbjct: 121 LYLSGWLGQH 130
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 48/113 (42%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C VDCR K + VP +P T ++ +++ K+ F R
Sbjct: 1 ACPSQCSCDQTTVDCRNKRFSSVPAGIP--TDRQNLWLNNNQITKL-----EPGVFDRLV 53
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
N R L QN + LP F +L + L N + +P AF N K L +
Sbjct: 54 NLQRLYLNQNQLQALPTGVFNKLTQLTHLSLYNNQLKSIPRGAFDNLKSLTHI 106
>gi|70955628|gb|AAZ16375.1| variable lymphocyte receptor B [Eptatretus stoutii]
Length = 259
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 76/171 (44%), Gaps = 13/171 (7%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ + C KGL VP +P +TT L L +N + LP F L + L
Sbjct: 23 ACPSRCSCSGTEIRCINKGLTSVPTGIPSSTTVLHLYKNQLQSLPNGVFDKLTSLTELYL 82
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDC-HL 214
N+ + F L LT+L L NN L +PDG+F L L+ + + N + C C +
Sbjct: 83 CCNKFQSLPNGVFDKLTKLTALGLENNQLKSVPDGIFDRLTSLQKIWLYNNPWDCTCPGI 142
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKI 265
+L W+ ++ G+ + + KCSGS RS I
Sbjct: 143 RYLSEWINKHS--GVVRIAYGA----------VDPDSAKCSGSGKPVRSII 181
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ + C KGL VP +P +TT L + K L S + F + T
Sbjct: 23 ACPSRCSCSGTEIRCINKGLTSVPTGIPSSTTVL-------HLYKNQLQSLPNGVFDKLT 75
Query: 354 NRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L N LP F +L + LE N + +P F L+++
Sbjct: 76 SLTELYLCCNKFQSLPNGVFDKLTKLTALGLENNQLKSVPDGIFDRLTSLQKI 128
>gi|320167356|gb|EFW44255.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 646
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 66/132 (50%), Gaps = 5/132 (3%)
Query: 101 CRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQI 160
C C VDC + L+ +P +P ATT LRL N IT +P AF L +++L N I
Sbjct: 32 CSCTGTTVDCAFRLLSAIPSEVPVATTLLRLNNNQITSIPANAFTGLTALTQLELHTNAI 91
Query: 161 SKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFI-----CDCHLS 215
++++ F GL SLT L L N T +P F L +L +L +S N + LS
Sbjct: 92 TEISASMFTGLSSLTQLYLFLNKFTTIPANAFTGLTQLSSLDLSYNQIVSISANAFSDLS 151
Query: 216 WLHRWLKRYPRL 227
L + L Y ++
Sbjct: 152 SLTQLLLNYNQI 163
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%)
Query: 127 TELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTY 186
+ L L N I + AF++ L ++ L+ NQI+ ++ F GL LT L LN+N T
Sbjct: 130 SSLDLSYNQIVSISANAFSDLSSLTQLLLNYNQITSISASTFTGLAVLTRLALNDNPFTT 189
Query: 187 LPDGVFAEL 195
LP G+F L
Sbjct: 190 LPPGLFKGL 198
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 8/108 (7%)
Query: 299 CRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSR- 357
C C VDC + L+ +P +P ATT L R++ + S +N F T ++
Sbjct: 32 CSCTGTTVDCAFRLLSAIPSEVPVATTLL-------RLNNNQITSIPANAFTGLTALTQL 84
Query: 358 RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N ITE+ F L ++ L N T +P AF +L +
Sbjct: 85 ELHTNAITEISASMFTGLSSLTQLYLFLNKFTTIPANAFTGLTQLSSL 132
>gi|260806478|ref|XP_002598111.1| hypothetical protein BRAFLDRAFT_85671 [Branchiostoma floridae]
gi|229283382|gb|EEN54123.1| hypothetical protein BRAFLDRAFT_85671 [Branchiostoma floridae]
Length = 869
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 120/317 (37%), Gaps = 89/317 (28%)
Query: 26 TLRISENSFICDCHLSWLHRWLKRYPRLGLYTK-------CFAPSHIKGQNILDIPEHEF 78
+L +++N ICDC L L L + LYTK C P ++G+ ++D+ E
Sbjct: 334 SLLMTQNPLICDCALYELIVNLDVAKQGVLYTKTDFQDMVCAVPDELRGRRVVDLRPSEL 393
Query: 79 KCSGPVE---------KPTGECAAEP---------SCPHPCRCA------------DGIV 108
CS + GE P +CP C C+ + +V
Sbjct: 394 WCSEECYNRFYACFCYEHEGEMFKSPQPWCFPEHNACPSECSCSFQGQLHSATAPYNELV 453
Query: 109 DCREKGLNKVPILLPEATT------------------------ELRLEQNDITELPPKAF 144
+C + L+ +P+ + TT EL L N+I+ + AF
Sbjct: 454 NCAGRNLSSIPVEISNVTTILHLEGNQLRVISQTVLPELLMVRELYLNDNNISYVGAMAF 513
Query: 145 ANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTY------------------ 186
+ + L + L N IS + F+ L +L L LN++ + Y
Sbjct: 514 SAFNSLEILRLDGNNISNIGSTIFKSLSNLRELYLNHSGVRYLSVDTFHDLASLQKLHLE 573
Query: 187 ------LPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL---GLYTKCFAPS 237
LP+ +FA L +LR+L I N CDC + W WL+ L G C +
Sbjct: 574 NNRLQSLPENMFAGLKKLRSLSIHGNPLNCDCDVLWFANWLRSRAFLLAQGHNVSCLTKT 633
Query: 238 HIKGQNILDIPEHEFKC 254
+ ++IL + + C
Sbjct: 634 KV-ARDILSVSSSQLDC 649
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 95/236 (40%), Gaps = 53/236 (22%)
Query: 200 TLRISENSFICDCHLSWLHRWLKRYPRLGLYTK-------CFAPSHIKGQNILDIPEHEF 252
+L +++N ICDC L L L + LYTK C P ++G+ ++D+ E
Sbjct: 334 SLLMTQNPLICDCALYELIVNLDVAKQGVLYTKTDFQDMVCAVPDELRGRRVVDLRPSEL 393
Query: 253 KCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEP---------SCPHPCRCA- 302
CS EEC F+ +C + GE P +CP C C+
Sbjct: 394 WCS------------EECYNRFY---ACFCYEHEGEMFKSPQPWCFPEHNACPSECSCSF 438
Query: 303 -----------DGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNF-- 349
+ +V+C + L+ +P+ + TT L + RV IS
Sbjct: 439 QGQLHSATAPYNELVNCAGRNLSSIPVEISNVTTILHLEGNQLRV--------ISQTVLP 490
Query: 350 KRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ R L N+I+ + AF+ + L +RL+ N+I+ + F + LR +
Sbjct: 491 ELLMVRELYLNDNNISYVGAMAFSAFNSLEILRLDGNNISNIGSTIFKSLSNLREL 546
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRL---GLYTKCFA 61
L NN L LP+ +FA L +LR+L I N CDC + W WL+ L G C
Sbjct: 572 LENNRLQSLPENMFAGLKKLRSLSIHGNPLNCDCDVLWFANWLRSRAFLLAQGHNVSCLT 631
Query: 62 PSHIKGQNILDIPEHEFKC 80
+ + ++IL + + C
Sbjct: 632 KTKV-ARDILSVSSSQLDC 649
>gi|119928543|dbj|BAF43097.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 169
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 1/133 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C IV C+ K L VP +P L L+ N IT+L P F + L +DL
Sbjct: 11 ACPARCSCDQTIVYCQSKRLTSVPAGIPTTAQSLSLQVNQITKLEPGVFDSLTLLTYLDL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
S NQ++ + F L +L L L+ N L +P G F L L + + N + C C +
Sbjct: 71 SNNQLTALPEGVFDRLGNLQQLGLHVNQLKSVPRGAFDNLKSLTHIFLYNNPWNCACSDI 130
Query: 215 SWLHRWLKRYPRL 227
+L RW+ ++P +
Sbjct: 131 LYLSRWISQHPGV 143
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 18/118 (15%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRV-----DKVLLYSYISN 347
+CP C C IV C+ K L VP +P L+ V+ I ++ D + L +Y+
Sbjct: 11 ACPARCSCDQTIVYCQSKRLTSVPAGIPTTAQSLSLQVNQITKLEPGVFDSLTLLTYLD- 69
Query: 348 NFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N +T LP F L+++ L N + +P AF N K L +
Sbjct: 70 -----------LSNNQLTALPEGVFDRLGNLQQLGLHVNQLKSVPRGAFDNLKSLTHI 116
>gi|119926370|dbj|BAF43224.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 195
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C+ + VP +P T ELRL N IT+L P F + +L + L
Sbjct: 11 ACPAQCSCSGASVECQSRSFASVPAGIPTTTRELRLYTNQITKLEPGVFDSLTQLTYLHL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
NQ++ + F L +L +L LN N LT LP GVF +L +L L + N
Sbjct: 71 GANQLTALPEGLFDRLVNLQNLFLNQNQLTALPTGVFDKLTQLXNLYLHSNQL 123
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 55/130 (42%), Gaps = 18/130 (13%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTEL-TYMVSIDRVD-------KVLLYSYI 345
+CP C C+ V+C+ + VP +P T EL Y I +++ L Y ++
Sbjct: 11 ACPAQCSCSGASVECQSRSFASVPAGIPTTTRELRLYTNQITKLEPGVFDSLTQLTYLHL 70
Query: 346 SNN---------FKRWTN-RSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKA 395
N F R N ++ L QN +T LP F +L + L N + +P A
Sbjct: 71 GANQLTALPEGLFDRLVNLQNLFLNQNQLTALPTGVFDKLTQLXNLYLHSNQLKSIPRGA 130
Query: 396 FANYKRLRRM 405
F N K L +
Sbjct: 131 FDNLKSLTHI 140
>gi|76162231|gb|ABA40189.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 167
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 81/169 (47%), Gaps = 15/169 (8%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C V+C E+ L VP +P T LRL N IT+L P F + L+ + L
Sbjct: 1 ACPSQCSCPGTDVNCHERRLASVPAEIPTTTKILRLYINQITKLEPGVFDSLVNLQTLYL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
+N+++ + F L LT L+LN+N L +P G F L L + + N + C+C +
Sbjct: 61 HQNELTTLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHVWLHTNPWDCECSDI 120
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L W+ ++ + P + N+ KCSG++ R+
Sbjct: 121 LYLKNWIVQHASI------VNPGNGGVDNV--------KCSGTNTPVRA 155
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTEL-TYMVSIDRVDKVLLYSYISNNFKRW 352
+CP C C V+C E+ L VP +P T L Y+ I +++ + S ++
Sbjct: 1 ACPSQCSCPGTDVNCHERRLASVPAEIPTTTKILRLYINQITKLEPGVFDSLVN------ 54
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
++ L QN++T LP F +L ++ L N + +P AF N K L +
Sbjct: 55 -LQTLYLHQNELTTLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHV 106
>gi|146160923|gb|ABQ08687.1| variable lymphocyte receptor diversity region, partial [Petromyzon
marinus]
Length = 192
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 79/180 (43%), Gaps = 12/180 (6%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C+ K L VP +P T L L N IT+L P F + +L R+DL
Sbjct: 1 ACPSQCSCSGTTVNCKSKSLASVPAGIPSTTQVLGLSSNQITKLEPGVFDSLTQLTRLDL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF------I 209
NQ++ + L +L L ++ N L LP GVF +L +L L + N +
Sbjct: 61 DNNQLTVLPAGVCDSLVNLQQLYISWNQLQALPTGVFNKLTQLTHLSLYNNQLKSIPRGV 120
Query: 210 CDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFK------CSGSSMETRS 263
D S H WL P T S GQN + + CSG++ R+
Sbjct: 121 FDNLKSLTHIWLYDNPWDCACTYILYLSTWIGQNSGKVTKESVNNPDSAVCSGTNTPVRA 180
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 43/112 (38%), Gaps = 30/112 (26%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWT 353
+CP C C+ V+C+ K L VP +P T L
Sbjct: 1 ACPSQCSCSGTTVNCKSKSLASVPAGIPSTTQVL-------------------------- 34
Query: 354 NRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N IT+L P F + +L R+ L+ N +T LP + L+++
Sbjct: 35 ----GLSSNQITKLEPGVFDSLTQLTRLDLDNNQLTVLPAGVCDSLVNLQQL 82
>gi|76161609|gb|ABA39901.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 169
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 13/169 (7%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V C+ K L VP +P L L N IT L P F + L ++L
Sbjct: 1 ACPSQCSCSGTKVHCQRKSLASVPAGIPTNVQILNLYNNQITNLEPGVFDSLTPLTFLNL 60
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
NQ++ + V F L L L L+ N L +P G F L L + + N + C C +
Sbjct: 61 GNNQLTALPVGVFDKLTQLIYLVLDTNQLKSIPRGAFDNLKSLTHIWLYNNPWDCACSDI 120
Query: 215 SWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRS 263
+L RW+ ++P GL F ++ +CSG++ R+
Sbjct: 121 LYLSRWISQHP--GLVFDGFG----------NVNPDSARCSGTNTPVRA 157
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 45/113 (39%), Gaps = 8/113 (7%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELT-YMVSIDRVDKVLLYSYISNNFKRW 352
+CP C C+ V C+ K L VP +P L Y I ++ + S F
Sbjct: 1 ACPSQCSCSGTKVHCQRKSLASVPAGIPTNVQILNLYNNQITNLEPGVFDSLTPLTF--- 57
Query: 353 TNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N +T LP F +L + L+ N + +P AF N K L +
Sbjct: 58 ----LNLGNNQLTALPVGVFDKLTQLIYLVLDTNQLKSIPRGAFDNLKSLTHI 106
>gi|81175481|gb|ABB59078.1| variable lymphocyte receptor A [Eptatretus stoutii]
Length = 298
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Query: 101 CRCADGI--VDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKN 158
C C D VDC K L +P +P TTELRL+ N +++L PKAF + +L + L +N
Sbjct: 34 CTCNDQTKNVDCSYKELTAIPSNIPVETTELRLQFNSLSKLSPKAFHHLSKLTYLSLGEN 93
Query: 159 QISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSF 208
Q+ + F L LT L+L+ N L LP GVF +L L+TL I N
Sbjct: 94 QLQSLPPRVFDSLTKLTYLSLDYNQLGSLPKGVFDKLTELKTLEIGNNQL 143
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
Query: 299 CRCADGI--VDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRS 356
C C D VDC K L +P +P TTEL + + + K+ ++ ++ + T S
Sbjct: 34 CTCNDQTKNVDCSYKELTAIPSNIPVETTELR--LQFNSLSKLSPKAF--HHLSKLTYLS 89
Query: 357 RRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L +N + LPP+ F + +L + L+ N + LP F L+ +
Sbjct: 90 --LGENQLQSLPPRVFDSLTKLTYLSLDYNQLGSLPKGVFDKLTELKTL 136
>gi|328714996|ref|XP_001950848.2| PREDICTED: probable G-protein coupled receptor 125-like
[Acyrthosiphon pisum]
Length = 1306
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 3/139 (2%)
Query: 116 NKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLT 175
N +PIL + +L L +N I+ + AF L+ + L+ N++ ++ F+GL SL
Sbjct: 100 NAIPILTLQ---KLDLTKNLISIIQDGAFRGTPNLKILTLTDNKLRNISQGMFEGLFSLE 156
Query: 176 SLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFA 235
L +N NN+ +P F L L L IS+N +CDC +S W+KR +LG ++C
Sbjct: 157 QLKINKNNIAQIPGNTFTFLIHLTRLDISDNPLVCDCEISGFLEWVKRKVKLGPKSECHE 216
Query: 236 PSHIKGQNILDIPEHEFKC 254
P+ +K I +I C
Sbjct: 217 PTSLKDTPIKNIRLDMLNC 235
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%)
Query: 5 LNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSH 64
+N NN+ +P F L L L IS+N +CDC +S W+KR +LG ++C P+
Sbjct: 160 INKNNIAQIPGNTFTFLIHLTRLDISDNPLVCDCEISGFLEWVKRKVKLGPKSECHEPTS 219
Query: 65 IKGQNILDIPEHEFKCSGP 83
+K I +I C P
Sbjct: 220 LKDTPIKNIRLDMLNCVRP 238
>gi|119926269|dbj|BAF43176.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 169
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 63/129 (48%), Gaps = 1/129 (0%)
Query: 96 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDL 155
+CP C C+ V+C+ + L VP +P T L L N IT+L P F L+++ L
Sbjct: 11 ACPAQCSCSGTSVNCQGRSLTSVPAGIPTTTQNLNLHVNQITKLEPGVFDRLMSLQKLYL 70
Query: 156 SKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCH-L 214
S NQ+S + F L L L L N L +P G F L L + + N + C C +
Sbjct: 71 SANQLSALPAGVFDKLTQLVHLELQFNQLKSIPRGAFDNLKSLTHIFLYNNPWDCACSDI 130
Query: 215 SWLHRWLKR 223
+L RW+ R
Sbjct: 131 LYLSRWISR 139
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 294 SCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVS-IDRVDKVLLYSYISNNFKRW 352
+CP C C+ V+C+ + L VP +P T L V+ I +++ + F R
Sbjct: 11 ACPAQCSCSGTSVNCQGRSLTSVPAGIPTTTQNLNLHVNQITKLEPGV--------FDRL 62
Query: 353 TNRSR-RLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
+ + L N ++ LP F +L + L+ N + +P AF N K L +
Sbjct: 63 MSLQKLYLSANQLSALPAGVFDKLTQLVHLELQFNQLKSIPRGAFDNLKSLTHI 116
>gi|260816195|ref|XP_002602857.1| hypothetical protein BRAFLDRAFT_270856 [Branchiostoma floridae]
gi|229288170|gb|EEN58869.1| hypothetical protein BRAFLDRAFT_270856 [Branchiostoma floridae]
Length = 282
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 83/170 (48%), Gaps = 5/170 (2%)
Query: 90 ECAAEPSCPHPCRCA-DGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYK 148
EC +CP C C D +V+C + L +P +PE L L N++ +P AF N +
Sbjct: 16 ECRDISACPARCECTEDHVVNCGYQRLTSLPQNIPEDAVNLYLHHNNLQYVPRGAFRNLR 75
Query: 149 RLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENS- 207
RL + L+ N++S++ AF+GL +L SL L N LT + VF L L L ++ N+
Sbjct: 76 RLEGLALTYNRVSQIEPGAFEGLTNLQSLYLGYNLLTNISADVFRGLSNLDFLVLNGNNP 135
Query: 208 FICDCHLSWLHRWLKR-YPRLGLY--TKCFAPSHIKGQNILDIPEHEFKC 254
C+C L WL + + Y L T C + +++P F C
Sbjct: 136 LTCNCELLWLRKLVDTAYFSLSSVESTYCTETDEMSEDLFVNMPLTNFTC 185
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 48/119 (40%), Gaps = 31/119 (26%)
Query: 288 ECAAEPSCPHPCRCA-DGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYIS 346
EC +CP C C D +V+C + L +P +PE D V LY
Sbjct: 16 ECRDISACPARCECTEDHVVNCGYQRLTSLPQNIPE--------------DAVNLY---- 57
Query: 347 NNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM 405
L N++ +P AF N +RL + L N ++++ P AF L+ +
Sbjct: 58 ------------LHHNNLQYVPRGAFRNLRRLEGLALTYNRVSQIEPGAFEGLTNLQSL 104
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.138 0.441
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,659,472,124
Number of Sequences: 23463169
Number of extensions: 282617323
Number of successful extensions: 816409
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 14647
Number of HSP's successfully gapped in prelim test: 6069
Number of HSP's that attempted gapping in prelim test: 623837
Number of HSP's gapped (non-prelim): 163656
length of query: 405
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 260
effective length of database: 8,957,035,862
effective search space: 2328829324120
effective search space used: 2328829324120
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 78 (34.7 bits)