BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12215
(155 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3B8H4|RBTN1_XENLA Rhombotin-1 OS=Xenopus laevis GN=lmo1 PE=2 SV=1
Length = 156
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 87/109 (79%), Positives = 99/109 (90%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAF 60
ALD +WHEDCLKC CCDCRLGEVGSTLY KANLILC+RDYLRLFGTTG CAAC+K+IPAF
Sbjct: 39 ALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFGTTGNCAACSKLIPAF 98
Query: 61 EMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYDYEERQV 109
EMVMRA++NVYHL+CFACQ CN RFCVGD+F+L +N ILC+ DYEE Q+
Sbjct: 99 EMVMRARDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQMDYEEGQL 147
>sp|P25800|RBTN1_HUMAN Rhombotin-1 OS=Homo sapiens GN=LMO1 PE=2 SV=1
Length = 156
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 87/109 (79%), Positives = 99/109 (90%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAF 60
ALD +WHEDCLKC CCDCRLGEVGSTLY KANLILC+RDYLRLFGTTG CAAC+K+IPAF
Sbjct: 39 ALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFGTTGNCAACSKLIPAF 98
Query: 61 EMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYDYEERQV 109
EMVMRA++NVYHL+CFACQ CN RFCVGD+F+L +N ILC+ DYEE Q+
Sbjct: 99 EMVMRARDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQMDYEEGQL 147
>sp|Q8JFQ2|RBTN1_DANRE Rhombotin-1 OS=Danio rerio GN=lmo1 PE=2 SV=1
Length = 155
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 87/109 (79%), Positives = 99/109 (90%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAF 60
ALD +WHEDCLKC CCDCRLGEVGSTLY KANLILC+RDYLRLFGTTG CAAC+K+IPAF
Sbjct: 38 ALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFGTTGNCAACSKLIPAF 97
Query: 61 EMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYDYEERQV 109
EMVMRA++NVYHL+CFACQ CN RFCVGD+F+L +N ILC+ DYEE Q+
Sbjct: 98 EMVMRARDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQMDYEEGQL 146
>sp|Q0P5B3|RBTN1_BOVIN Rhombotin-1 OS=Bos taurus GN=LMO1 PE=2 SV=1
Length = 156
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 87/109 (79%), Positives = 99/109 (90%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAF 60
ALD +WHEDCLKC CCDCRLGEVGSTLY KANLILC+RDYLRLFGTTG CAAC+K+IPAF
Sbjct: 39 ALDQYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFGTTGNCAACSKLIPAF 98
Query: 61 EMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYDYEERQV 109
EMVMRA++NVYHL+CFACQ CN RFCVGD+F+L +N ILC+ DYEE Q+
Sbjct: 99 EMVMRARDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQMDYEEGQL 147
>sp|Q924W9|RBTN1_MOUSE Rhombotin-1 OS=Mus musculus GN=Lmo1 PE=2 SV=1
Length = 156
Score = 186 bits (471), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 86/106 (81%), Positives = 97/106 (91%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAF 60
ALD +WHEDCLKC CCDCRLGEVGSTLY KANLILC+RDYLRLFGTTG CAAC+K+IPAF
Sbjct: 39 ALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFGTTGNCAACSKLIPAF 98
Query: 61 EMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYDYEE 106
EMVMRA++NVYHL+CFACQ CN RFCVGD+F+L +N ILC+ DYEE
Sbjct: 99 EMVMRARDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQVDYEE 144
>sp|Q99MB5|LMO3_RAT LIM domain only protein 3 OS=Rattus norvegicus GN=Lmo3 PE=2 SV=2
Length = 145
Score = 185 bits (470), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 86/106 (81%), Positives = 97/106 (91%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAF 60
ALD +WHEDCLKC CCDCRLGEVGSTLY KANLILC+RDYLRLFGTTG CAAC+K+IPAF
Sbjct: 28 ALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFGTTGNCAACSKLIPAF 87
Query: 61 EMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYDYEE 106
EMVMRA++NVYHL+CFACQ CN RFCVGD+F+L +N ILC+ DYEE
Sbjct: 88 EMVMRARDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEE 133
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGY 49
A D +H DC C C+ R VG + K N+ILC+ DY GY
Sbjct: 93 ARDNVYHLDCFACQLCNQRFC-VGDKFFLKNNMILCQTDYEEGLMKEGY 140
>sp|Q9YH16|LMO3_XENLA LIM domain only protein 3 OS=Xenopus laevis GN=lmo3 PE=2 SV=1
Length = 156
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 86/106 (81%), Positives = 95/106 (89%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAF 60
ALD +WHEDCLKC CCDCRLGEVGSTLY KANLILC+RDYLRLFG TG CAAC+K+IPAF
Sbjct: 39 ALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFGVTGNCAACSKLIPAF 98
Query: 61 EMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYDYEE 106
EMVMRAK NVYHL+CFACQ CN RFCVGD+F+L +N ILC+ DYEE
Sbjct: 99 EMVMRAKENVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEE 144
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCA 51
A + +H DC C C+ R VG + K N+ILC+ DY GY A
Sbjct: 104 AKENVYHLDCFACQLCNQRFC-VGDKFFLKNNMILCQTDYEEGLMKEGYSA 153
>sp|Q5RBW7|LMO3_PONAB LIM domain only protein 3 OS=Pongo abelii GN=LMO3 PE=2 SV=1
Length = 145
Score = 184 bits (468), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 86/106 (81%), Positives = 96/106 (90%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAF 60
ALD +WHEDCLKC CCDCRLGEVGSTLY KANLILC+RDYLRLFG TG CAAC+K+IPAF
Sbjct: 28 ALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFGVTGNCAACSKLIPAF 87
Query: 61 EMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYDYEE 106
EMVMRAK+NVYHL+CFACQ CN RFCVGD+F+L +N ILC+ DYEE
Sbjct: 88 EMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEE 133
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGY 49
A D +H DC C C+ R VG + K N+ILC+ DY GY
Sbjct: 93 AKDNVYHLDCFACQLCNQRFC-VGDKFFLKNNMILCQTDYEEGLMKEGY 140
>sp|Q8BZL8|LMO3_MOUSE LIM domain only protein 3 OS=Mus musculus GN=Lmo3 PE=2 SV=1
Length = 145
Score = 184 bits (468), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 86/106 (81%), Positives = 96/106 (90%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAF 60
ALD +WHEDCLKC CCDCRLGEVGSTLY KANLILC+RDYLRLFG TG CAAC+K+IPAF
Sbjct: 28 ALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFGVTGNCAACSKLIPAF 87
Query: 61 EMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYDYEE 106
EMVMRAK+NVYHL+CFACQ CN RFCVGD+F+L +N ILC+ DYEE
Sbjct: 88 EMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEE 133
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGY 49
A D +H DC C C+ R VG + K N+ILC+ DY GY
Sbjct: 93 AKDNVYHLDCFACQLCNQRFC-VGDKFFLKNNMILCQTDYEEGLMKEGY 140
>sp|Q8TAP4|LMO3_HUMAN LIM domain only protein 3 OS=Homo sapiens GN=LMO3 PE=2 SV=1
Length = 145
Score = 184 bits (468), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 86/106 (81%), Positives = 96/106 (90%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAF 60
ALD +WHEDCLKC CCDCRLGEVGSTLY KANLILC+RDYLRLFG TG CAAC+K+IPAF
Sbjct: 28 ALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFGVTGNCAACSKLIPAF 87
Query: 61 EMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYDYEE 106
EMVMRAK+NVYHL+CFACQ CN RFCVGD+F+L +N ILC+ DYEE
Sbjct: 88 EMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEE 133
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGY 49
A D +H DC C C+ R VG + K N+ILC+ DY GY
Sbjct: 93 AKDNVYHLDCFACQLCNQRFC-VGDKFFLKNNMILCQTDYEEGLMKEGY 140
>sp|Q2KIA3|LMO3_BOVIN LIM domain only protein 3 OS=Bos taurus GN=LMO3 PE=2 SV=1
Length = 145
Score = 184 bits (468), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 86/106 (81%), Positives = 96/106 (90%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAF 60
ALD +WHEDCLKC CCDCRLGEVGSTLY KANLILC+RDYLRLFG TG CAAC+K+IPAF
Sbjct: 28 ALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFGVTGNCAACSKLIPAF 87
Query: 61 EMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYDYEE 106
EMVMRAK+NVYHL+CFACQ CN RFCVGD+F+L +N ILC+ DYEE
Sbjct: 88 EMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEE 133
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGY 49
A D +H DC C C+ R VG + K N+ILC+ DY GY
Sbjct: 93 AKDNVYHLDCFACQLCNQRFC-VGDKFFLKNNMILCQTDYEEGLMKEGY 140
>sp|Q503U0|LMO3_DANRE LIM domain only protein 3 OS=Danio rerio GN=lmo3 PE=2 SV=1
Length = 145
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 86/106 (81%), Positives = 95/106 (89%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAF 60
ALD +WHEDCLKC CCDCRLGEVGSTLY KANLILC+RDYLRLFG TG CAAC+K+IPAF
Sbjct: 28 ALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFGVTGNCAACSKLIPAF 87
Query: 61 EMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYDYEE 106
EMVMRAK NVYHL+CFACQ CN RFCVGD+F+L +N ILC+ DYEE
Sbjct: 88 EMVMRAKENVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYEE 133
Score = 30.0 bits (66), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGY 49
A + +H DC C C+ R VG + K N+ILC+ DY GY
Sbjct: 93 AKENVYHLDCFACQLCNQRFC-VGDKFFLKNNMILCQTDYEEGLMKEGY 140
>sp|Q5M8V8|RBTN2_XENTR Rhombotin-2 OS=Xenopus tropicalis GN=lmo2 PE=2 SV=1
Length = 158
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 64/106 (60%), Positives = 73/106 (68%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAF 60
A+D +WHEDCL C C CRLGEVG LY K LC+RDYLRLFG G CA+C K I AF
Sbjct: 45 AIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLRLFGQDGLCASCDKRIRAF 104
Query: 61 EMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYDYEE 106
EM MR K+ VYHLECF C C FCVGDR+ L ++ I+CE D E
Sbjct: 105 EMTMRVKDKVYHLECFKCAACQKHFCVGDRYLLINSDIVCEQDIYE 150
>sp|Q6DJ06|LMO42_XENTR LIM domain transcription factor LMO4.2 OS=Xenopus tropicalis
GN=lmo4.2 PE=2 SV=1
Length = 165
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 75/103 (72%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAF 60
A+D +WH CLKC CC +LGE+G++ Y K+ +ILC+ DY+RLFG +G C+AC + IPA
Sbjct: 38 AMDSYWHSRCLKCSCCQAQLGEIGTSCYTKSGMILCRNDYIRLFGNSGACSACGQSIPAS 97
Query: 61 EMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYD 103
E+VMRA+ NVYHL+CF C C +R GDRF+ + + CE+D
Sbjct: 98 ELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHYINGSLFCEHD 140
>sp|P25791|RBTN2_HUMAN Rhombotin-2 OS=Homo sapiens GN=LMO2 PE=1 SV=1
Length = 158
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 73/106 (68%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAF 60
A+D +WHEDCL C C CRLGEVG LY K LC+RDYLRLFG G CA+C K I A+
Sbjct: 45 AIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLRLFGQDGLCASCDKRIRAY 104
Query: 61 EMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYDYEE 106
EM MR K+ VYHLECF C C FCVGDR+ L ++ I+CE D E
Sbjct: 105 EMTMRVKDKVYHLECFKCAACQKHFCVGDRYLLINSDIVCEQDIYE 150
>sp|Q1LZ94|RBTN2_BOVIN Rhombotin-2 OS=Bos taurus GN=LMO2 PE=2 SV=1
Length = 158
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 73/106 (68%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAF 60
A+D +WHEDCL C C CRLGEVG LY K LC+RDYLRLFG G CA+C K I A+
Sbjct: 45 AIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLRLFGQDGLCASCDKRIRAY 104
Query: 61 EMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYDYEE 106
EM MR K+ VYHLECF C C FCVGDR+ L ++ I+CE D E
Sbjct: 105 EMTMRVKDKVYHLECFKCAACQKHFCVGDRYLLINSDIVCEQDIYE 150
>sp|P25801|RBTN2_MOUSE Rhombotin-2 OS=Mus musculus GN=Lmo2 PE=1 SV=1
Length = 158
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 73/106 (68%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAF 60
A+D +WHEDCL C C CRLGEVG LY K LC+RDYLRLFG G CA+C K I A+
Sbjct: 45 AIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLRLFGQDGLCASCDKRIRAY 104
Query: 61 EMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYDYEE 106
EM MR K+ VYHLECF C C FCVGDR+ L ++ I+CE D E
Sbjct: 105 EMTMRVKDKVYHLECFKCAACQKHFCVGDRYLLINSDIVCEQDIYE 150
>sp|Q9PTJ3|RBTN2_DANRE Rhombotin-2 OS=Danio rerio GN=lmo2 PE=2 SV=1
Length = 159
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/106 (58%), Positives = 73/106 (68%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAF 60
A++ +WHEDCL C C CRLGEVG LY K LC+RDYLRLFG G CA+C K I AF
Sbjct: 45 AIEQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLRLFGQDGLCASCEKRIRAF 104
Query: 61 EMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYDYEE 106
EM MR ++ VYHLECF C C FCVGDR+ L ++ I+CE D E
Sbjct: 105 EMTMRVRDKVYHLECFKCAACQKHFCVGDRYLLINSDIVCEQDIFE 150
>sp|P61969|LMO4_MOUSE LIM domain transcription factor LMO4 OS=Mus musculus GN=Lmo4 PE=1
SV=1
Length = 165
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 75/103 (72%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAF 60
A+D +WH CLKC CC +LG++G++ Y K+ +ILC+ DY+RLFG +G C+AC + IPA
Sbjct: 38 AMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIRLFGNSGACSACGQSIPAS 97
Query: 61 EMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYD 103
E+VMRA+ NVYHL+CF C C +R GDRF+ + + CE+D
Sbjct: 98 ELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHYINGSLFCEHD 140
>sp|P61968|LMO4_HUMAN LIM domain transcription factor LMO4 OS=Homo sapiens GN=LMO4 PE=1
SV=1
Length = 165
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 75/103 (72%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAF 60
A+D +WH CLKC CC +LG++G++ Y K+ +ILC+ DY+RLFG +G C+AC + IPA
Sbjct: 38 AMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIRLFGNSGACSACGQSIPAS 97
Query: 61 EMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYD 103
E+VMRA+ NVYHL+CF C C +R GDRF+ + + CE+D
Sbjct: 98 ELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHYINGSLFCEHD 140
>sp|Q3SWZ8|LMO4_BOVIN LIM domain transcription factor LMO4 OS=Bos taurus GN=LMO4 PE=2
SV=1
Length = 165
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 75/103 (72%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAF 60
A+D +WH CLKC CC +LG++G++ Y K+ +ILC+ DY+RLFG +G C+AC + IPA
Sbjct: 38 AMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIRLFGNSGACSACGQSIPAS 97
Query: 61 EMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYD 103
E+VMRA+ NVYHL+CF C C +R GDRF+ + + CE+D
Sbjct: 98 ELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHYINGSLFCEHD 140
>sp|Q90XH3|RBTN2_XENLA Rhombotin-2 OS=Xenopus laevis GN=lmo2 PE=2 SV=1
Length = 158
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 62/106 (58%), Positives = 72/106 (67%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAF 60
A+D +WHEDCL C C CRLGEVG LY K LC+RDYLRLFG G CA+C I A+
Sbjct: 45 AIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLRLFGQDGLCASCDNRIRAY 104
Query: 61 EMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYDYEE 106
EM MR K+ VYHLECF C C FCVGDR+ L ++ I+CE D E
Sbjct: 105 EMTMRVKDKVYHLECFKCAACQKHFCVGDRYLLINSDIVCEQDIYE 150
>sp|Q5FVB2|LMO41_XENTR LIM domain transcription factor LMO4.1 OS=Xenopus tropicalis
GN=lmo4.1 PE=2 SV=1
Length = 167
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 76/103 (73%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAF 60
+++ +WH CLKC CC +LGE+G++ Y K+ +ILC+ DY+RLFG++G C+AC + IPA
Sbjct: 39 SMERYWHTRCLKCSCCQAQLGEIGTSCYTKSGMILCRNDYIRLFGSSGACSACGQSIPAS 98
Query: 61 EMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYD 103
EMVMRA+ +VYHL+CF C C +R GDRF+ + I CE+D
Sbjct: 99 EMVMRAQGSVYHLKCFTCATCRNRLVPGDRFHYVNGAIFCEHD 141
>sp|Q8AW92|LMO4A_XENLA LIM domain transcription factor LMO4-A OS=Xenopus laevis GN=lmo4-a
PE=2 SV=1
Length = 171
Score = 130 bits (326), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 74/103 (71%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAF 60
++D +WH CLKC CC +LGE+G++ Y K+ +ILC+ DY+RLFG +G C AC + IPA
Sbjct: 39 SMDRYWHTRCLKCSCCQAQLGEIGTSCYTKSGMILCRNDYIRLFGNSGACNACGQSIPAS 98
Query: 61 EMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYD 103
EMVMRA+ +VYHL+CF C C +R GDRF+ + I CE+D
Sbjct: 99 EMVMRAQGSVYHLKCFTCATCRNRLVPGDRFHYVNGTIFCEHD 141
>sp|Q801P0|LMO4B_XENLA LIM domain transcription factor LMO4-B OS=Xenopus laevis GN=lmo4-b
PE=2 SV=1
Length = 171
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 74/103 (71%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAF 60
++D +WH CLKC CC +LGE+G++ Y K+ +ILC+ DY+RLFG +G C AC + IPA
Sbjct: 39 SMDRYWHTRCLKCSCCQAQLGEIGTSCYTKSGMILCRNDYIRLFGNSGACNACGQSIPAS 98
Query: 61 EMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYD 103
EMVMRA+ +VYHL+CF C C +R GDRF+ + I CE+D
Sbjct: 99 EMVMRAQGSVYHLKCFTCATCRNRLVPGDRFHYVNGTIFCEHD 141
>sp|Q25132|LHX3_HALRO LIM/homeobox protein Lhx3 OS=Halocynthia roretzi GN=LHX3 PE=2 SV=2
Length = 692
Score = 97.8 bits (242), Expect = 3e-20, Method: Composition-based stats.
Identities = 44/102 (43%), Positives = 62/102 (60%), Gaps = 6/102 (5%)
Query: 6 WHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAFEMVMR 65
WH LKC C +L E + + NL+ CK D+ + FGT C AC IP E++ R
Sbjct: 302 WHSQGLKCNDCSAQLSE---KCFSRGNLVFCKDDFFKRFGTK--CTACGHGIPPTEVIRR 356
Query: 66 AKNNVYHLECFACQQCNHRFCVGDRFYLC-DNKILCEYDYEE 106
A++NVYHLE F C C+ + GD+FYL DN+++C+ DYE+
Sbjct: 357 AQDNVYHLEGFCCFLCHEKMGTGDQFYLLEDNRLVCKKDYEQ 398
>sp|P53412|LHX3_CHICK LIM/homeobox protein Lhx3 OS=Gallus gallus GN=LHX3 PE=2 SV=1
Length = 395
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 63/105 (60%), Gaps = 6/105 (5%)
Query: 2 LDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAFE 61
LD WH CLKC C +L E + + + + CK D+ + FGT CAAC + IP +
Sbjct: 44 LDRHWHSKCLKCSDCQTQLAE---KCFSRGDGVYCKEDFFKRFGTK--CAACQQGIPPTQ 98
Query: 62 MVMRAKNNVYHLECFACQQCNHRFCVGDRFYLC-DNKILCEYDYE 105
+V RA++ VYHL CFAC C + GD FYL D++++C+ DYE
Sbjct: 99 VVRRAQDFVYHLHCFACIVCKRQLATGDEFYLMEDSRLVCKADYE 143
>sp|P36200|LHX3_XENLA LIM/homeobox protein Lhx3 OS=Xenopus laevis GN=lhx3 PE=1 SV=1
Length = 395
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 62/105 (59%), Gaps = 6/105 (5%)
Query: 2 LDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAFE 61
LD WH CLKC C +L E + + + + CK D+ + FGT CAAC + IP +
Sbjct: 44 LDRHWHSKCLKCNDCQIQLAE---KCFSRGDSVYCKDDFFKRFGTK--CAACQQGIPPTQ 98
Query: 62 MVMRAKNNVYHLECFACQQCNHRFCVGDRFYLC-DNKILCEYDYE 105
+V RA+ VYHL CFAC C + GD FYL D++++C+ DYE
Sbjct: 99 VVRRAQEFVYHLHCFACIVCKRQLATGDEFYLMEDSRLVCKADYE 143
>sp|Q969G2|LHX4_HUMAN LIM/homeobox protein Lhx4 OS=Homo sapiens GN=LHX4 PE=1 SV=2
Length = 390
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 62/105 (59%), Gaps = 6/105 (5%)
Query: 2 LDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAFE 61
LD WH CLKC C +L + + +A + CK D+ + FGT C AC + IP +
Sbjct: 46 LDRHWHSSCLKCADCQMQLAD---RCFSRAGSVYCKEDFFKRFGTK--CTACQQGIPPTQ 100
Query: 62 MVMRAKNNVYHLECFACQQCNHRFCVGDRFYLC-DNKILCEYDYE 105
+V +A++ VYHL CFAC CN + GD FYL D +++C+ DYE
Sbjct: 101 VVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDYE 145
>sp|P53776|LHX4_MOUSE LIM/homeobox protein Lhx4 OS=Mus musculus GN=Lhx4 PE=1 SV=4
Length = 390
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 62/105 (59%), Gaps = 6/105 (5%)
Query: 2 LDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAFE 61
LD WH CLKC C +L + + +A + CK D+ + FGT C AC + IP +
Sbjct: 46 LDRHWHSSCLKCADCQMQLAD---RCFSRAGSVYCKEDFFKRFGTK--CTACQQGIPPTQ 100
Query: 62 MVMRAKNNVYHLECFACQQCNHRFCVGDRFYLC-DNKILCEYDYE 105
+V +A++ VYHL CFAC CN + GD FYL D +++C+ DYE
Sbjct: 101 VVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDYE 145
>sp|Q9UBR4|LHX3_HUMAN LIM/homeobox protein Lhx3 OS=Homo sapiens GN=LHX3 PE=1 SV=2
Length = 397
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 78/157 (49%), Gaps = 15/157 (9%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAF 60
ALD WH CLKC C L E + + + CK D+ + FGT CAAC IP
Sbjct: 46 ALDRHWHSKCLKCSDCHTPLAE---RCFSRGESVYCKDDFFKRFGTK--CAACQLGIPPT 100
Query: 61 EMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLC-DNKILCEYDYE---ERQVFCVGDRF 116
++V RA++ VYHL CFAC C + GD FYL D++++C+ DYE +R+ R
Sbjct: 101 QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYETAKQREAEATAKR- 159
Query: 117 YLCDNKILCEYDYEERQVFANIAYNPSSLAHLRRQVT 153
+ E + N + P+ H+R Q++
Sbjct: 160 ---PRTTITAKQLETLKSAYNTSPKPAR--HVREQLS 191
>sp|P50481|LHX3_MOUSE LIM/homeobox protein Lhx3 OS=Mus musculus GN=Lhx3 PE=1 SV=1
Length = 400
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 78/157 (49%), Gaps = 15/157 (9%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAF 60
ALD WH CLKC C L E + + + CK D+ + FGT CAAC IP
Sbjct: 49 ALDRHWHSKCLKCSDCHVPLAE---RCFSRGESVYCKDDFFKRFGTK--CAACQLGIPPT 103
Query: 61 EMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLC-DNKILCEYDYE---ERQVFCVGDRF 116
++V RA++ VYHL CFAC C + GD FYL D++++C+ DYE +R+ R
Sbjct: 104 QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYETAKQREAEATAKR- 162
Query: 117 YLCDNKILCEYDYEERQVFANIAYNPSSLAHLRRQVT 153
+ E + N + P+ H+R Q++
Sbjct: 163 ---PRTTITAKQLETLKSAYNTSPKPAR--HVREQLS 194
>sp|Q90421|LHX3_DANRE LIM/homeobox protein Lhx3 OS=Danio rerio GN=lhx3 PE=2 SV=1
Length = 398
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 82/160 (51%), Gaps = 19/160 (11%)
Query: 2 LDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAFE 61
LD WH CLKC C +L + + + + + CK D+ + FGT CAAC + IP +
Sbjct: 44 LDRHWHSKCLKCSDCQSQLAD---KCFSRGDSVYCKDDFFKRFGTK--CAACQQGIPPTQ 98
Query: 62 MVMRAKNNVYHLECFACQQCNHRFCVGDRFYLC-DNKILCEYDYE---ERQVFCVGDRFY 117
+V RA++ VYHL CFAC C + GD +YL D++++C+ DYE +R+ R
Sbjct: 99 VVRRAQDFVYHLHCFACIVCKRQLATGDEYYLMEDSRLVCKADYETAKQREADSTAKR-- 156
Query: 118 LCDNKILCEYDYEERQVFANIAYN--PSSLAHLRRQVTLQ 155
++ + N AYN P H+R Q++ +
Sbjct: 157 -----PRTTITAKQLETLKN-AYNNSPKPARHVREQLSTE 190
>sp|O97581|LHX3_PIG LIM/homeobox protein Lhx3 (Fragment) OS=Sus scrofa GN=LHX3 PE=2
SV=1
Length = 383
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 78/157 (49%), Gaps = 15/157 (9%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAF 60
ALD WH CLKC C L E + + + CK D+ + FGT CAAC IP
Sbjct: 31 ALDRHWHSKCLKCSDCHTPLAE---RCFSRGESLYCKDDFFKRFGTK--CAACQLGIPPT 85
Query: 61 EMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLC-DNKILCEYDYE---ERQVFCVGDRF 116
++V RA++ VYHL CFAC C + GD FYL D++++C+ DYE +R+ R
Sbjct: 86 QVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYETAKQREAEATAKR- 144
Query: 117 YLCDNKILCEYDYEERQVFANIAYNPSSLAHLRRQVT 153
+ E + N + P+ H+R Q++
Sbjct: 145 ---PRTTITAKQLETLKSAYNTSPKPAR--HVREQLS 176
>sp|P53409|ISL3_ONCTS Insulin gene enhancer protein ISL-3 OS=Oncorhynchus tschawytscha
GN=isl3 PE=2 SV=1
Length = 363
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAF 60
+ DL WH CLKC C L E T + + CKRDY+RLFG CA C +
Sbjct: 43 SPDLEWHAACLKCAECSQYLDET-CTCFVRDGKTYCKRDYVRLFGIK--CAKCNLGFSSS 99
Query: 61 EMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYDYE 105
++VMRA++NVYH+ECF C C+ + GD F L D ++LC D+
Sbjct: 100 DLVMRARDNVYHIECFRCSVCSRQLLPGDEFSLRDEELLCRADHS 144
>sp|P50212|ISL2B_ONCTS Insulin gene enhancer protein ISL-2B (Fragment) OS=Oncorhynchus
tschawytscha GN=isl2b PE=2 SV=1
Length = 340
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAF 60
A DL WH CLKC C L E T + + CKRDY+RLFG CA C +
Sbjct: 25 APDLEWHAACLKCSECSQYLDET-CTCFVRDGKTYCKRDYVRLFGIK--CAKCNIGFCSS 81
Query: 61 EMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYDY 104
++VMRA++NVYH+ECF C C+ + GD F L D ++LC D+
Sbjct: 82 DLVMRARDNVYHMECFRCSVCSRQLVPGDEFSLRDEELLCRADH 125
>sp|Q1LWV4|LHX9_DANRE LIM/homeobox protein Lhx9 OS=Danio rerio GN=lhx9 PE=2 SV=1
Length = 396
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 59/106 (55%), Gaps = 4/106 (3%)
Query: 1 ALDLFWHEDCLKCGCCDCRLG-EVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPA 59
A+D WH CLKC C+C+L E T + K I CK DY R F + CA C I A
Sbjct: 86 AVDKQWHLRCLKC--CECKLALESELTCFAKDGSIYCKEDYYRRF-SVQRCARCHLGISA 142
Query: 60 FEMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYDYE 105
EMVMRA+++VYHL CF C CN GD F + DN + C +E
Sbjct: 143 SEMVMRARDSVYHLSCFTCTTCNKTLTTGDHFGMKDNLVYCRVHFE 188
>sp|P53408|ISL2A_ONCTS Insulin gene enhancer protein ISL-2A OS=Oncorhynchus tschawytscha
GN=isl2a PE=2 SV=1
Length = 358
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAF 60
A DL WH CLKC C L E T + + CKRDY+RLFG CA C +
Sbjct: 43 APDLEWHAACLKCAECSQYLDET-CTCFVRDGKTYCKRDYVRLFGIK--CANCNIGFCSS 99
Query: 61 EMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYDY 104
++VMRA++NVYH+ECF C C+ GD F L D ++LC D+
Sbjct: 100 DLVMRARDNVYHMECFRCSVCSRHLLPGDEFSLRDEELLCRADH 143
>sp|P53407|ISL2B_DANRE Insulin gene enhancer protein isl-2b OS=Danio rerio GN=isl2b PE=2
SV=1
Length = 358
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAF 60
+ DL WH CLKC C+ L E T + + CKRDY+RLFG CA CT +
Sbjct: 43 SPDLEWHAACLKCVECNQYLDET-CTCFVRDGKTYCKRDYVRLFGIK--CAKCTLGFSSS 99
Query: 61 EMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYDY 104
++VMRA+++VYH+ECF C C+ + GD F + D ++LC D+
Sbjct: 100 DLVMRARDSVYHIECFRCSVCSRQLLPGDEFSVRDEELLCRADH 143
>sp|Q90881|LHX9_CHICK LIM/homeobox protein Lhx9 OS=Gallus gallus GN=LHX9 PE=2 SV=2
Length = 397
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Query: 1 ALDLFWHEDCLKCGCCDCRLG-EVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPA 59
A+D WH CLKC C+C+L E T + K I CK DY R F + CA C I A
Sbjct: 86 AVDKQWHLRCLKC--CECKLALESELTCFAKDGSIYCKEDYYRRF-SVQRCARCHLGISA 142
Query: 60 FEMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYDYEE 106
EMVMRA+ +VYHL CF C CN GD F + DN + C +E
Sbjct: 143 SEMVMRARESVYHLSCFTCTTCNKTLTTGDHFGMKDNLVYCRAHFES 189
>sp|P53406|ISL2A_DANRE Insulin gene enhancer protein isl-2a OS=Danio rerio GN=isl2a PE=2
SV=1
Length = 359
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAF 60
+ DL WH CLKC C L E T + + CKRDY+RLFG CA C +
Sbjct: 43 SPDLEWHAACLKCAECSQYLDET-CTCFVRDGKTYCKRDYVRLFGIK--CAKCNIGFCSS 99
Query: 61 EMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYDY 104
++VMRA++NVYH+ECF C C+ GD F L D ++LC D+
Sbjct: 100 DLVMRARDNVYHMECFRCSVCSRHLLPGDEFSLRDEELLCRADH 143
>sp|A0JNI8|LHX9_BOVIN LIM/homeobox protein Lhx9 OS=Bos taurus GN=LHX9 PE=2 SV=2
Length = 397
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 59/106 (55%), Gaps = 4/106 (3%)
Query: 1 ALDLFWHEDCLKCGCCDCRLG-EVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPA 59
A+D WH CLKC C+C+L E T + K I CK DY R F + CA C I A
Sbjct: 86 AVDKQWHLRCLKC--CECKLALESELTCFAKDGSIYCKEDYYRRF-SVQRCARCHLGISA 142
Query: 60 FEMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYDYE 105
EMVMRA+++VYHL CF C CN GD F + D+ + C +E
Sbjct: 143 SEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCRAHFE 188
>sp|A2I8Z7|LHX9_ASTFA LIM/homeobox protein Lhx9 OS=Astyanax fasciatus GN=lhx9 PE=2 SV=1
Length = 377
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 59/107 (55%), Gaps = 4/107 (3%)
Query: 1 ALDLFWHEDCLKCGCCDCRLG-EVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPA 59
A+D WH CLKC C+C+L E T + K I CK DY R F + CA C I A
Sbjct: 67 AVDKQWHLRCLKC--CECKLALESELTCFAKDGSIYCKEDYYRRF-SVQRCARCHLGISA 123
Query: 60 FEMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYDYEE 106
EMVMRA+++VYHL CF C CN GD F + +N + C +E
Sbjct: 124 SEMVMRARDSVYHLSCFTCTSCNKTLTTGDHFGMRENLVYCRAHFES 170
>sp|Q9NQ69|LHX9_HUMAN LIM/homeobox protein Lhx9 OS=Homo sapiens GN=LHX9 PE=1 SV=3
Length = 397
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 59/106 (55%), Gaps = 4/106 (3%)
Query: 1 ALDLFWHEDCLKCGCCDCRLG-EVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPA 59
A+D WH CLKC C+C+L E T + K I CK DY R F + CA C I A
Sbjct: 86 AVDKQWHLRCLKC--CECKLALESELTCFAKDGSIYCKEDYYRRF-SVQRCARCHLGISA 142
Query: 60 FEMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYDYE 105
EMVMRA+++VYHL CF C CN GD F + D+ + C +E
Sbjct: 143 SEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCRAHFE 188
>sp|Q9WUH2|LHX9_MOUSE LIM/homeobox protein Lhx9 OS=Mus musculus GN=Lhx9 PE=1 SV=3
Length = 397
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 59/106 (55%), Gaps = 4/106 (3%)
Query: 1 ALDLFWHEDCLKCGCCDCRLG-EVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPA 59
A+D WH CLKC C+C+L E T + K I CK DY R F + CA C I A
Sbjct: 86 AVDKQWHLRCLKC--CECKLALESELTCFAKDGSIYCKEDYYRRF-SVQRCARCHLGISA 142
Query: 60 FEMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYDYE 105
EMVMRA+++VYHL CF C CN GD F + D+ + C +E
Sbjct: 143 SEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCRAHFE 188
>sp|Q80W90|LHX9_RAT LIM/homeobox protein Lhx9 OS=Rattus norvegicus GN=Lhx9 PE=2 SV=1
Length = 388
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 59/106 (55%), Gaps = 4/106 (3%)
Query: 1 ALDLFWHEDCLKCGCCDCRLG-EVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPA 59
A+D WH CLKC C+C+L E T + K I CK DY R F + CA C I A
Sbjct: 77 AVDKQWHLRCLKC--CECKLALESELTCFAKDGSIYCKEDYYRRF-SVQRCARCHLGISA 133
Query: 60 FEMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYDYE 105
EMVMRA+++VYHL CF C CN GD F + D+ + C +E
Sbjct: 134 SEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCRAHFE 179
>sp|Q96A47|ISL2_HUMAN Insulin gene enhancer protein ISL-2 OS=Homo sapiens GN=ISL2 PE=1
SV=1
Length = 359
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAF 60
+ DL WH CLKC C L E T + + CKRDY+RLFG CA C +
Sbjct: 43 SPDLEWHAACLKCAECSQYLDET-CTCFVRDGKTYCKRDYVRLFGIK--CAKCQVGFSSS 99
Query: 61 EMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYDY 104
++VMRA+++VYH+ECF C C+ + GD F L ++++LC D+
Sbjct: 100 DLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRADH 143
>sp|Q9CXV0|ISL2_MOUSE Insulin gene enhancer protein ISL-2 OS=Mus musculus GN=Isl2 PE=1
SV=2
Length = 359
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 1 ALDLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAF 60
+ DL WH CLKC C L E T + + CKRDY+RLFG CA C +
Sbjct: 43 SPDLEWHAACLKCAECSQYLDET-CTCFVRDGKTYCKRDYVRLFGIK--CAQCQVGFSSS 99
Query: 61 EMVMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYDY 104
++VMRA+++VYH+ECF C C+ + GD F L ++++LC D+
Sbjct: 100 DLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRADH 143
>sp|P50480|ISL2_RAT Insulin gene enhancer protein ISL-2 OS=Rattus norvegicus GN=Isl2
PE=1 SV=1
Length = 360
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 3 DLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAFEM 62
DL WH CLKC C L E T + + CKRDY+RLFG CA C + ++
Sbjct: 45 DLEWHAACLKCAECSQYLDET-CTCFVRDGKTYCKRDYVRLFGIK--CAQCQVGFSSSDL 101
Query: 63 VMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYDY 104
VMRA+++VYH+ECF C C+ + GD F L ++++LC D+
Sbjct: 102 VMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRADH 143
>sp|Q68G74|LHX8_HUMAN LIM/homeobox protein Lhx8 OS=Homo sapiens GN=LHX8 PE=2 SV=2
Length = 356
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 3 DLFWHEDCLKCGCCDCRLGEVGSTLYQKANLILCKRDYLRLFGTTGYCAACTKVIPAFEM 62
DL WH CL C C LG ++ Y K I CK DY R +GT C+ C + I + +
Sbjct: 92 DLCWHVRCLSCSVCRTSLGR-HTSCYIKDKDIFCKLDYFRRYGT--RCSRCGRHIHSTDW 148
Query: 63 VMRAKNNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYDYE 105
V RAK NVYHL CFAC C + G+ F L + K+LC Y+
Sbjct: 149 VRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYD 191
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.331 0.144 0.496
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,042,309
Number of Sequences: 539616
Number of extensions: 2276491
Number of successful extensions: 6719
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 149
Number of HSP's that attempted gapping in prelim test: 5722
Number of HSP's gapped (non-prelim): 726
length of query: 155
length of database: 191,569,459
effective HSP length: 107
effective length of query: 48
effective length of database: 133,830,547
effective search space: 6423866256
effective search space used: 6423866256
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 56 (26.2 bits)