Query psy12217
Match_columns 262
No_of_seqs 179 out of 1800
Neff 9.8
Searched_HMMs 29240
Date Fri Aug 16 21:48:51 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12217.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12217hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 100.0 4E-33 1.4E-37 250.3 17.5 198 55-258 28-237 (510)
2 3v2y_A Sphingosine 1-phosphate 100.0 2.1E-31 7.2E-36 239.6 18.8 187 59-257 63-250 (520)
3 3odu_A C-X-C chemokine recepto 100.0 2.1E-31 7.3E-36 237.7 17.6 194 57-260 46-243 (502)
4 3vw7_A Proteinase-activated re 100.0 4.2E-30 1.4E-34 228.4 20.6 195 57-259 18-221 (484)
5 1u19_A Rhodopsin; G protein-co 100.0 5.4E-30 1.9E-34 218.2 19.6 194 57-259 36-237 (349)
6 3pbl_A D(3) dopamine receptor, 100.0 2.2E-30 7.5E-35 230.0 17.2 189 59-259 38-230 (481)
7 3uon_A Human M2 muscarinic ace 100.0 7.3E-30 2.5E-34 225.7 19.3 192 58-259 22-219 (467)
8 2rh1_A Beta-2-adrenergic recep 100.0 3E-30 1E-34 231.0 16.3 193 59-259 40-239 (500)
9 2lnl_A C-X-C chemokine recepto 100.0 1.3E-29 4.6E-34 211.7 18.8 191 57-258 9-206 (296)
10 2ks9_A Substance-P receptor; w 100.0 1E-28 3.6E-33 211.8 22.7 189 59-258 32-228 (364)
11 3eml_A Human adenosine A2A rec 100.0 1.4E-29 4.8E-34 224.9 17.2 194 57-260 19-226 (488)
12 4dkl_A MU-type opioid receptor 100.0 4.5E-29 1.5E-33 220.3 18.5 193 57-258 15-213 (464)
13 3rze_A Histamine H1 receptor, 100.0 5.4E-29 1.8E-33 219.3 16.0 189 59-259 8-204 (452)
14 4eiy_A Adenosine receptor A2A/ 100.0 9.8E-30 3.4E-34 223.7 10.1 194 56-259 28-235 (447)
15 4ea3_A Fusion protein of nocic 100.0 5.8E-28 2E-32 212.4 19.9 194 57-259 123-322 (434)
16 2z73_A Rhodopsin; visual pigme 100.0 2.2E-28 7.5E-33 215.7 16.0 193 58-258 33-232 (448)
17 4amj_A Beta-1 adrenergic recep 100.0 9.5E-29 3.3E-33 207.3 12.2 194 59-260 11-211 (315)
18 3sn6_R Lysozyme, beta-2 adrene 100.0 2.4E-28 8.1E-33 219.3 12.0 193 58-258 181-380 (514)
19 1hll_A Alpha-2A adrenergic rec 98.6 9.6E-09 3.3E-13 55.4 2.0 31 152-182 2-32 (32)
20 2lot_A Apelin receptor; membra 97.0 9.2E-05 3.2E-09 45.8 -0.4 31 61-91 30-60 (64)
21 4ay9_X Follicle-stimulating ho 62.3 4.3 0.00015 33.5 2.7 29 34-62 321-349 (350)
22 2rdd_B UPF0092 membrane protei 29.6 24 0.00081 18.6 1.3 22 237-258 7-29 (37)
23 2ks1_B Epidermal growth factor 27.8 75 0.0025 17.6 3.2 13 79-91 29-41 (44)
24 2jwa_A Receptor tyrosine-prote 24.3 98 0.0034 17.1 4.2 11 79-89 29-39 (44)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=100.00 E-value=4e-33 Score=250.26 Aligned_cols=198 Identities=15% Similarity=0.213 Sum_probs=161.4
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC---CchhHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccccc
Q psy12217 55 DLMGNWALRVSVWFVAIAALVGNLAVLLVLISSRFR---MTVPKFLMCNLAFADFCMGLYLIMIAIMDVRSIGDYFNHAI 131 (262)
Q Consensus 55 ~~~~~~~~~~~~~~i~~~g~~gN~~vl~~~~~~~~~---~~~~~~~l~nLaiaDll~~~~~~~~~~~~~~~~~~~~~~~~ 131 (262)
+.....++.+++.+++++|++||+++++++.++|++ ++++|+|++|||++|++++++.+|..+.... ...+
T Consensus 28 ~~~~~v~~~~~~~~i~~~g~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~~~------~~~~ 101 (510)
T 4grv_A 28 DIYSKVLVTAIYLALFVVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYNFI------WVHH 101 (510)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT------TCCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HhCC
Confidence 335567788899999999999999999999887654 4788999999999999999998888775433 2235
Q ss_pred ccccCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccchhhHHHHHHHHHHHHHHHhhhcceeccCC--
Q psy12217 132 YWQRGM-GCQMAGFLTVFSSVLSIFTLTVITCERWYTITYAIHLNRRLKLSTATKIMVVGWVYSIAMAALPLFDVSNY-- 208 (262)
Q Consensus 132 ~w~~~~-~C~~~~~~~~~~~~~s~~~l~~isidRy~~i~~P~~~~~~~~~~~~~~~~~~~W~~s~~~~~~~~~~~~~~-- 208 (262)
.|.+|+ +|++..++..++..+|++++++||+|||++|++|++|+..++++++..+++++|++++++++|++++++..
T Consensus 102 ~w~~g~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~ai~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~ 181 (510)
T 4grv_A 102 PWAFGDAGCRGYYFLRDACTYATALNVASLSVARYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFTMGLQNR 181 (510)
T ss_dssp SCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCCSCCHHHHHHHHHHHHHHHTTHHHHEEEEEC
T ss_pred CEEhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHheEEEeccccccccccccccceeehHHHHHHHHHHHHHHHhhccccc
Confidence 799999 89999999999999999999999999999999999999999999999999999999999998887754321
Q ss_pred ------CCceEEeecCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q psy12217 209 ------SKTSICLPMKNTNSTDSAYLIFLLLFNGLAFWMICACYARMYSSIRGGTE 258 (262)
Q Consensus 209 ------~~~~~C~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~ 258 (262)
.....|...++......++.+..++.+++|+++|+++|.+|++.++++.+
T Consensus 182 ~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~f~iP~~ii~~~Y~~I~~~l~~~~~ 237 (510)
T 4grv_A 182 SADGTHPGGLVCTPIVDTATVKVVIQVNTFMSFLFPMLVISILNTVIANKLTVMVN 237 (510)
T ss_dssp SSSSCCGGGEEEEECSCHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTSCT
T ss_pred ccCCCCCCccccccccccchhhhhhhhhhhHHHhhhHHHHHHHHHHHHHHHHHHhh
Confidence 12346766554433333334445566889999999999999999998754
No 2
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.97 E-value=2.1e-31 Score=239.60 Aligned_cols=187 Identities=19% Similarity=0.252 Sum_probs=160.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccccccccCc-
Q psy12217 59 NWALRVSVWFVAIAALVGNLAVLLVLISSRFRMTVPKFLMCNLAFADFCMGLYLIMIAIMDVRSIGDYFNHAIYWQRGM- 137 (262)
Q Consensus 59 ~~~~~~~~~~i~~~g~~gN~~vl~~~~~~~~~~~~~~~~l~nLaiaDll~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~- 137 (262)
..++.+++.+++++|++||+++++++.++|++|+++|+|++|||++|++.++..+|..+.. ....|..+.
T Consensus 63 ~~~~~~~~~~i~~~g~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~~~p~~~~~---------~~~~~~~~~~ 133 (520)
T 3v2y_A 63 IKLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLS---------GATTYKLTPA 133 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHS---------GGGGTTSCHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHHHHHc---------cccceeeCcc
Confidence 3678889999999999999999999999999999999999999999999999988877653 124688887
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccchhhHHHHHHHHHHHHHHHhhhcceeccCCCCceEEeec
Q psy12217 138 GCQMAGFLTVFSSVLSIFTLTVITCERWYTITYAIHLNRRLKLSTATKIMVVGWVYSIAMAALPLFDVSNYSKTSICLPM 217 (262)
Q Consensus 138 ~C~~~~~~~~~~~~~s~~~l~~isidRy~~i~~P~~~~~~~~~~~~~~~~~~~W~~s~~~~~~~~~~~~~~~~~~~C~~~ 217 (262)
.|++..++..++.++|++++++||+|||++|+ |++|+.+++++++..+++++|++++++++||+++++.+.+...|...
T Consensus 134 ~c~~~~~~~~~~~~~S~~~l~~isidRy~aI~-p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~C~~~ 212 (520)
T 3v2y_A 134 QWFLREGSMFVALSASVFSLLAIAIERYITML-KMKLHNGSNNFRLFLLISACWVISLILGGLPIMGWNCISALSSCSTV 212 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-C-------CCHHHHHHHHHHHHHHHHHHHTTTTTCBCTTCGGGBCSS
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHhhEEe-ccccccccchhHHHHHHHHHHHHHHHHHHHHHHeeccccCCCccccc
Confidence 89999999999999999999999999999999 99999999999999999999999999999999999888777889765
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy12217 218 KNTNSTDSAYLIFLLLFNGLAFWMICACYARMYSSIRGGT 257 (262)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~ 257 (262)
+. .....|.+..++.+++|+++++++|.+|++.+|+++
T Consensus 213 ~~--~~~~~~~~~~~~~~~lPl~ii~~~Y~~I~~~l~~~~ 250 (520)
T 3v2y_A 213 LP--LYHKHYILFCTTVFTLLLLSIVILYCRIYSLVRTRN 250 (520)
T ss_dssp ST--TBBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CC--ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 43 234566666667789999999999999999999875
No 3
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=99.97 E-value=2.1e-31 Score=237.73 Aligned_cols=194 Identities=16% Similarity=0.209 Sum_probs=162.5
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccccccccC
Q psy12217 57 MGNWALRVSVWFVAIAALVGNLAVLLVLISSRFRMTVPKFLMCNLAFADFCMGLYLIMIAIMDVRSIGDYFNHAIYWQRG 136 (262)
Q Consensus 57 ~~~~~~~~~~~~i~~~g~~gN~~vl~~~~~~~~~~~~~~~~l~nLaiaDll~~~~~~~~~~~~~~~~~~~~~~~~~w~~~ 136 (262)
..+.+..+++.+++++|++||+++++++.+++++|++.|++++|||++|++.++ ..|..+.... .+|.++
T Consensus 46 ~~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~l~~~~~~~l~~La~~Dll~~~-~~p~~~~~~~---------~~~~~~ 115 (502)
T 3odu_A 46 FNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFVI-TLPFWAVDAV---------ANWYFG 115 (502)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHHHT-THHHHHHHHH---------TCCCSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHh---------cCCcCC
Confidence 456788899999999999999999999999999999999999999999999965 4444443222 268888
Q ss_pred c-cchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccchhhHHHHHHHHHHHHHHHhhhcceeccC--CCCceE
Q psy12217 137 M-GCQMAGFLTVFSSVLSIFTLTVITCERWYTITYAIHLNRRLKLSTATKIMVVGWVYSIAMAALPLFDVSN--YSKTSI 213 (262)
Q Consensus 137 ~-~C~~~~~~~~~~~~~s~~~l~~isidRy~~i~~P~~~~~~~~~~~~~~~~~~~W~~s~~~~~~~~~~~~~--~~~~~~ 213 (262)
. .|++..++..++..+|++++++||+|||++|++|++|+...+++++..+++++|++++++++|+++.... ..+...
T Consensus 116 ~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~ 195 (502)
T 3odu_A 116 NFLCKAVHVIYTVNLYSSVWILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVSEADDRYI 195 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHTHHHHHTHHHHHHTTHHHHHHEEEEECSSSEE
T ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHHHHHhheecccccccccchhHHHHhhhHHHHHHHHHHHHHHHheeeeccCCceE
Confidence 8 8999999999999999999999999999999999999999999999999999999999999877664332 345567
Q ss_pred EeecCCCCCCchhHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcccccc
Q psy12217 214 CLPMKNTNSTDSAYLIF-LLLFNGLAFWMICACYARMYSSIRGGTEGV 260 (262)
Q Consensus 214 C~~~~~~~~~~~~~~~~-~~~~~~ip~~ii~~~y~~I~~~l~~~~~~~ 260 (262)
|...+........|.+. .++.+++|+++++++|.+|++.+||+++++
T Consensus 196 C~~~~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~ 243 (502)
T 3odu_A 196 CDRFYPNDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSGSNI 243 (502)
T ss_dssp EEECCSSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHGGGCSCCH
T ss_pred EeecCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccch
Confidence 97666554444444443 345578999999999999999999988763
No 4
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=99.97 E-value=4.2e-30 Score=228.40 Aligned_cols=195 Identities=17% Similarity=0.185 Sum_probs=159.8
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccccccccC
Q psy12217 57 MGNWALRVSVWFVAIAALVGNLAVLLVLISSRFRMTVPKFLMCNLAFADFCMGLYLIMIAIMDVRSIGDYFNHAIYWQRG 136 (262)
Q Consensus 57 ~~~~~~~~~~~~i~~~g~~gN~~vl~~~~~~~~~~~~~~~~l~nLaiaDll~~~~~~~~~~~~~~~~~~~~~~~~~w~~~ 136 (262)
....++.+++.+++++|++||+++++++.+++++|+++|++++|||++|++.++..++....... ...|.+|
T Consensus 18 ~~~~~~~~~~~~i~~~~i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~~~~~~~~~~~~--------~~~~~~~ 89 (484)
T 3vw7_A 18 WLTLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVSVLPFKISYYFS--------GSDWQFG 89 (484)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHTTHHHHHHHHHT--------TSCCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------cCCcccc
Confidence 44677888999999999999999999999999999999999999999999998776666554322 2479999
Q ss_pred c-cchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccchhhHHHHHHHHHHHHHHHhhhcceeccCC----CCc
Q psy12217 137 M-GCQMAGFLTVFSSVLSIFTLTVITCERWYTITYAIHLNRRLKLSTATKIMVVGWVYSIAMAALPLFDVSNY----SKT 211 (262)
Q Consensus 137 ~-~C~~~~~~~~~~~~~s~~~l~~isidRy~~i~~P~~~~~~~~~~~~~~~~~~~W~~s~~~~~~~~~~~~~~----~~~ 211 (262)
. .|++..++..++..+|++++++||+|||++|++|++|+...+++++..+++++|++++++++|+++++..+ ...
T Consensus 90 ~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~ 169 (484)
T 3vw7_A 90 SELCRFVTAAFYCNMYASILLMTVISIDRFLAVVYPMQSLSWRTLGRASFTCLAIWALAIAGVVPLLLKEQTIQVPGLGI 169 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHTSCCEEEETTTTE
T ss_pred hhHHhHHHHHHHHHHHHHHHHHHHHHHHHheEEEcccccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCC
Confidence 8 89999999999999999999999999999999999999999999999999999999999998887765542 234
Q ss_pred eEEeecCCCCCCchh---HH-HHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q psy12217 212 SICLPMKNTNSTDSA---YL-IFLLLFNGLAFWMICACYARMYSSIRGGTEG 259 (262)
Q Consensus 212 ~~C~~~~~~~~~~~~---~~-~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~ 259 (262)
..|...+........ |. ...++.+++|+++++++|.+|++.+||++++
T Consensus 170 ~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~Y~~I~~~l~~~~~~ 221 (484)
T 3vw7_A 170 TTCHDVLSETLLEGYYAYYFSAFSAVFFFVPLIISTVCYVSIIRCLSSSANI 221 (484)
T ss_dssp EEESSSCSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCH
T ss_pred ceeeccCCccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHhhHH
Confidence 679766655443332 22 2335668999999999999999999998863
No 5
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=99.97 E-value=5.4e-30 Score=218.22 Aligned_cols=194 Identities=20% Similarity=0.333 Sum_probs=160.7
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccccccccC
Q psy12217 57 MGNWALRVSVWFVAIAALVGNLAVLLVLISSRFRMTVPKFLMCNLAFADFCMGLYLIMIAIMDVRSIGDYFNHAIYWQRG 136 (262)
Q Consensus 57 ~~~~~~~~~~~~i~~~g~~gN~~vl~~~~~~~~~~~~~~~~l~nLaiaDll~~~~~~~~~~~~~~~~~~~~~~~~~w~~~ 136 (262)
....+..+++.+++++|++||+++++++.++|++|++.|++++|||++|++.++...|..+.... .+.|.+|
T Consensus 36 ~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~~~--------~~~~~~~ 107 (349)
T 1u19_A 36 WQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSL--------HGYFVFG 107 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHH--------HTSCTTH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHhcchHHHHHHh--------cCeeeCC
Confidence 34567778889999999999999999999999999999999999999999999987777665433 2368888
Q ss_pred c-cchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccchhhHHHHHHHHHHHHHHHhhhcceeccCCC---Cce
Q psy12217 137 M-GCQMAGFLTVFSSVLSIFTLTVITCERWYTITYAIHLNRRLKLSTATKIMVVGWVYSIAMAALPLFDVSNYS---KTS 212 (262)
Q Consensus 137 ~-~C~~~~~~~~~~~~~s~~~l~~isidRy~~i~~P~~~~~~~~~~~~~~~~~~~W~~s~~~~~~~~~~~~~~~---~~~ 212 (262)
. .|++..++..++..+|.+++++||+|||++|++|++|++ .++|++...++++|+++++.+.|++++++.+. ...
T Consensus 108 ~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~-~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~ 186 (349)
T 1u19_A 108 PTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFR-FGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQC 186 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSCC-CCHHHHHHHHHHHHHHHHHHHSGGGTTSSCCEEETTTT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHheeeCCcccee-eccchhHHHHHHHHHHHHHHHHHHHHheeeeeccCCce
Confidence 8 899999999999999999999999999999999999866 78899999999999999999988888765542 345
Q ss_pred EEeecCCCCC---CchhHHHH-HHHHHHHHHHHHHHHHHHHHHHHhccccc
Q psy12217 213 ICLPMKNTNS---TDSAYLIF-LLLFNGLAFWMICACYARMYSSIRGGTEG 259 (262)
Q Consensus 213 ~C~~~~~~~~---~~~~~~~~-~~~~~~ip~~ii~~~y~~I~~~l~~~~~~ 259 (262)
.|...+.... ....|... ..+.+++|+++++++|.+|.+.+||++++
T Consensus 187 ~C~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~ 237 (349)
T 1u19_A 187 SCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQ 237 (349)
T ss_dssp EEECCCSCCCGGGTHHHHHHHHHHHTTHHHHHHHHHHHTTTTTSSCSCCCS
T ss_pred eecccccCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 7865543321 22334433 34456899999999999999999988764
No 6
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.97 E-value=2.2e-30 Score=230.01 Aligned_cols=189 Identities=18% Similarity=0.283 Sum_probs=160.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccccccccCc-
Q psy12217 59 NWALRVSVWFVAIAALVGNLAVLLVLISSRFRMTVPKFLMCNLAFADFCMGLYLIMIAIMDVRSIGDYFNHAIYWQRGM- 137 (262)
Q Consensus 59 ~~~~~~~~~~i~~~g~~gN~~vl~~~~~~~~~~~~~~~~l~nLaiaDll~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~- 137 (262)
+.+..+++.+++++|++||+++++++.++|++|++.|++++|||++|++.++...|..+..... .+.|.++.
T Consensus 38 ~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~-------~~~~~~~~~ 110 (481)
T 3pbl_A 38 HAYYALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVT-------GGVWNFSRI 110 (481)
T ss_dssp ---CCSHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHT-------TSCCCSCHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cCccccCcc
Confidence 4556778899999999999999999999999999999999999999999988888877654332 24799998
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhccccc---ccccchhhHHHHHHHHHHHHHHHhhhcceeccCCCCceEE
Q psy12217 138 GCQMAGFLTVFSSVLSIFTLTVITCERWYTITYAIHL---NRRLKLSTATKIMVVGWVYSIAMAALPLFDVSNYSKTSIC 214 (262)
Q Consensus 138 ~C~~~~~~~~~~~~~s~~~l~~isidRy~~i~~P~~~---~~~~~~~~~~~~~~~~W~~s~~~~~~~~~~~~~~~~~~~C 214 (262)
.|++..++..++..+|++++++||+|||++|++|++| ....+++++..+++++|++++++++|++++++...+...|
T Consensus 111 ~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~C 190 (481)
T 3pbl_A 111 CCDVFVTLDVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLFGFNTTGDPTVC 190 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHTTTCCCSSTTCC
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHheecccCCCCcc
Confidence 8999999999999999999999999999999999998 5778889999999999999999998988887776666678
Q ss_pred eecCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q psy12217 215 LPMKNTNSTDSAYLIFLLLFNGLAFWMICACYARMYSSIRGGTEG 259 (262)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~ 259 (262)
...+ ..+.....++.+++|+++++++|.+|++.+|+++++
T Consensus 191 ~~~~-----~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~ 230 (481)
T 3pbl_A 191 SISN-----PDFVIYSSVVSFYLPFGVTVLVYARIYVVLKQRRRK 230 (481)
T ss_dssp SCCC-----HHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred cccC-----ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 5421 223334455667899999999999999999998775
No 7
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=99.97 E-value=7.3e-30 Score=225.72 Aligned_cols=192 Identities=16% Similarity=0.236 Sum_probs=162.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccccccccCc
Q psy12217 58 GNWALRVSVWFVAIAALVGNLAVLLVLISSRFRMTVPKFLMCNLAFADFCMGLYLIMIAIMDVRSIGDYFNHAIYWQRGM 137 (262)
Q Consensus 58 ~~~~~~~~~~~i~~~g~~gN~~vl~~~~~~~~~~~~~~~~l~nLaiaDll~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~ 137 (262)
...+..+++.+++++|++||+++++++.+++++|++.|++++|||++|++.++...|..+.... .+.|.++.
T Consensus 22 ~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~--------~~~~~~~~ 93 (467)
T 3uon_A 22 EVVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTV--------IGYWPLGP 93 (467)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHH--------SSSCCSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHh--------cCCccCCc
Confidence 3567888899999999999999999999999999999999999999999998888887765443 23799998
Q ss_pred -cchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccchhhHHHHHHHHHHHHHHHhhhcceeccC-----CCCc
Q psy12217 138 -GCQMAGFLTVFSSVLSIFTLTVITCERWYTITYAIHLNRRLKLSTATKIMVVGWVYSIAMAALPLFDVSN-----YSKT 211 (262)
Q Consensus 138 -~C~~~~~~~~~~~~~s~~~l~~isidRy~~i~~P~~~~~~~~~~~~~~~~~~~W~~s~~~~~~~~~~~~~-----~~~~ 211 (262)
.|++..++..++..+|++++++||+|||++|++|++|+...+++++..+++++|++++++++|+++++.. ....
T Consensus 94 ~~C~~~~~~~~~~~~~s~~~l~~isidRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (467)
T 3uon_A 94 VVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSFILWAPAILFWQFIVGVRTVED 173 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTSGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCS
T ss_pred chHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999888776442 2334
Q ss_pred eEEeecCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q psy12217 212 SICLPMKNTNSTDSAYLIFLLLFNGLAFWMICACYARMYSSIRGGTEG 259 (262)
Q Consensus 212 ~~C~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~ 259 (262)
..|...+... ..+.....++.+++|+++++++|.+|++.+||+.++
T Consensus 174 ~~C~~~~~~~--~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~ 219 (467)
T 3uon_A 174 GECYIQFFSN--AAVTFGTAIAAFYLPVIIMTVLYWHISRASKSRINI 219 (467)
T ss_dssp SCCCCGGGGS--HHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCCCH
T ss_pred CcceeecCcc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 5675443321 122333445667899999999999999999998764
No 8
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=99.97 E-value=3e-30 Score=230.97 Aligned_cols=193 Identities=21% Similarity=0.322 Sum_probs=158.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccccccccCc-
Q psy12217 59 NWALRVSVWFVAIAALVGNLAVLLVLISSRFRMTVPKFLMCNLAFADFCMGLYLIMIAIMDVRSIGDYFNHAIYWQRGM- 137 (262)
Q Consensus 59 ~~~~~~~~~~i~~~g~~gN~~vl~~~~~~~~~~~~~~~~l~nLaiaDll~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~- 137 (262)
..++.+++.+++++|++||++++++++++|++|++.|++++|||++|++.++...|..+.... .+.|.+|.
T Consensus 40 ~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~--------~~~w~~~~~ 111 (500)
T 2rh1_A 40 VVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHIL--------MKMWTFGNF 111 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHH--------HTSCCSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHH--------hCCCcCCcc
Confidence 456778899999999999999999999999999999999999999999999887777665433 23699998
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccchhhHHHHHHHHHHHHHHHhhhcce-eccCCCC--ceEE
Q psy12217 138 GCQMAGFLTVFSSVLSIFTLTVITCERWYTITYAIHLNRRLKLSTATKIMVVGWVYSIAMAALPLF-DVSNYSK--TSIC 214 (262)
Q Consensus 138 ~C~~~~~~~~~~~~~s~~~l~~isidRy~~i~~P~~~~~~~~~~~~~~~~~~~W~~s~~~~~~~~~-~~~~~~~--~~~C 214 (262)
.|++..++..++..+|++++++||+|||++|++|++|+..++++++..+++++|+++++++++|.+ ++..... ...|
T Consensus 112 ~C~~~~~~~~~~~~~Si~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~p~~~~~~~~~~~~~~~c 191 (500)
T 2rh1_A 112 WCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINC 191 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTSCSSCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHeeccCcCCeeecccceeehhhHHHHHHHHHHhcchheeeecccccCccee
Confidence 899999999999999999999999999999999999999999999999999999999999866653 3333221 2345
Q ss_pred eecCC--CCCCchhHHHH-HHHHHHHHHHHHHHHHHHHHHHHhccccc
Q psy12217 215 LPMKN--TNSTDSAYLIF-LLLFNGLAFWMICACYARMYSSIRGGTEG 259 (262)
Q Consensus 215 ~~~~~--~~~~~~~~~~~-~~~~~~ip~~ii~~~y~~I~~~l~~~~~~ 259 (262)
...+. +......|.+. .++.+++|+++++++|.+|++.+||+.++
T Consensus 192 ~~~~~~~~~~~~~~y~~~~~~~~~~iPl~ii~~~Y~~I~~~l~~~~~~ 239 (500)
T 2rh1_A 192 YAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNI 239 (500)
T ss_dssp HHCTTCCCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHCSH
T ss_pred cccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43222 12233445444 34557899999999999999999988765
No 9
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.97 E-value=1.3e-29 Score=211.71 Aligned_cols=191 Identities=19% Similarity=0.289 Sum_probs=152.0
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccccccccC
Q psy12217 57 MGNWALRVSVWFVAIAALVGNLAVLLVLISSRFRMTVPKFLMCNLAFADFCMGLYLIMIAIMDVRSIGDYFNHAIYWQRG 136 (262)
Q Consensus 57 ~~~~~~~~~~~~i~~~g~~gN~~vl~~~~~~~~~~~~~~~~l~nLaiaDll~~~~~~~~~~~~~~~~~~~~~~~~~w~~~ 136 (262)
..+.+..+++.+++++|++||+++++++.++|++|+++|+++.|||++|++.++..++..... ..+|.+|
T Consensus 9 ~~~~i~~i~y~ii~i~gv~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~l~~p~~~~~~----------~~~~~~~ 78 (296)
T 2lnl_A 9 LNKYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASK----------VNGWIFG 78 (296)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHHHHHHHHHHHH----------HSSSCCS
T ss_pred hhHHhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHhhhHHHhhc----------cCCCccc
Confidence 456778889999999999999999999999999999999999999999999987766654321 1369999
Q ss_pred c-cchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccchhhHHHHHHHHHHHHHHHhhhcceeccCCCCc---e
Q psy12217 137 M-GCQMAGFLTVFSSVLSIFTLTVITCERWYTITYAIHLNRRLKLSTATKIMVVGWVYSIAMAALPLFDVSNYSKT---S 212 (262)
Q Consensus 137 ~-~C~~~~~~~~~~~~~s~~~l~~isidRy~~i~~P~~~~~~~~~~~~~~~~~~~W~~s~~~~~~~~~~~~~~~~~---~ 212 (262)
+ .|+...++...+..+|.+++++||+|||++|++|++|+.. .+++...+++++|+.+++.+.|+..+.+.+..+ .
T Consensus 79 ~~~c~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~~-~~~~~~~~~~~~W~~s~~~~~p~~~~~~~~~~~~~~~ 157 (296)
T 2lnl_A 79 TFLCKVVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQ-KRHLVKFVCLGCWGLSMNLSLPFFLFRQAYHPNNSSP 157 (296)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSSSCC-HHHHHHHHHHHHHHHHHHHHHHHHHTSSCCCCCTTSC
T ss_pred hhHHHHHhhhhhhhHHHHHHHHHHHHhhhhhhhhhccccchh-hhhhhHheehHHHHHHHHHhcchhhcceeecCCCCCc
Confidence 9 8999999999999999999999999999999999998765 446777788899999999998877765554322 2
Q ss_pred EEeecC--CCCCCchhHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcccc
Q psy12217 213 ICLPMK--NTNSTDSAYLIF-LLLFNGLAFWMICACYARMYSSIRGGTE 258 (262)
Q Consensus 213 ~C~~~~--~~~~~~~~~~~~-~~~~~~ip~~ii~~~y~~I~~~l~~~~~ 258 (262)
.|.... ........+... ..+.+++|+.++..+|.++.++++|+++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~y~~i~~~~~~~~~ 206 (296)
T 2lnl_A 158 VCYEVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAHM 206 (296)
T ss_dssp CCCSCCSCCTTTTTTHHHHTTTHHHHHHHHHHHHHHHHHHTTTSSSCCC
T ss_pred eeeeeccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 222211 222223333333 4556789999999999999999887654
No 10
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=99.97 E-value=1e-28 Score=211.82 Aligned_cols=189 Identities=18% Similarity=0.349 Sum_probs=152.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccccccccCc-
Q psy12217 59 NWALRVSVWFVAIAALVGNLAVLLVLISSRFRMTVPKFLMCNLAFADFCMGLYLIMIAIMDVRSIGDYFNHAIYWQRGM- 137 (262)
Q Consensus 59 ~~~~~~~~~~i~~~g~~gN~~vl~~~~~~~~~~~~~~~~l~nLaiaDll~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~- 137 (262)
.....+++.+++++|++||+++++++.++|++|++.|++++|||++|++.++...|..+.... .+.|.+|.
T Consensus 32 ~~~~~~~~~~i~~~gi~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~~~p~~~~~~~--------~~~~~~~~~ 103 (364)
T 2ks9_A 32 IVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAV--------HNEWYYGLF 103 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHH--------HTSCSSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------cCCccchHH
Confidence 344578888999999999999999999999999999999999999999998877776654332 23688888
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccchhhHHHHHHHHHHHHHHHhhhcceeccC---CCCceEE
Q psy12217 138 GCQMAGFLTVFSSVLSIFTLTVITCERWYTITYAIHLNRRLKLSTATKIMVVGWVYSIAMAALPLFDVSN---YSKTSIC 214 (262)
Q Consensus 138 ~C~~~~~~~~~~~~~s~~~l~~isidRy~~i~~P~~~~~~~~~~~~~~~~~~~W~~s~~~~~~~~~~~~~---~~~~~~C 214 (262)
.|++..++..++..+|.+++++||+|||++|++|++|+ .+++++..+++++|+++++.+.|+.. +.. ..+...|
T Consensus 104 ~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~--~~~~~~~~~i~~~W~~s~~~~~p~~~-~~~~~~~~~~~~C 180 (364)
T 2ks9_A 104 YCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPR--LSATATKVVICVIWVLALLLAFPQGY-YSTTETMPSRVVC 180 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTS--CCHHHHHHHHHHHHHHHHHHHTTTTT-TSCCCBCTTCSSB
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc--cccchHHHHHHHHHHHHHHHHhHHHH-HhhheecCCCCEE
Confidence 89999999999999999999999999999999999975 58888999999999999999865543 332 2234568
Q ss_pred eecCCCCC---CchhHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcccc
Q psy12217 215 LPMKNTNS---TDSAYLIF-LLLFNGLAFWMICACYARMYSSIRGGTE 258 (262)
Q Consensus 215 ~~~~~~~~---~~~~~~~~-~~~~~~ip~~ii~~~y~~I~~~l~~~~~ 258 (262)
...+.... ....|... .++.+++|++++.++|.+|.+.+||+++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ii~~~y~~i~~~l~~~~~ 228 (364)
T 2ks9_A 181 MIEWPEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEI 228 (364)
T ss_dssp CCCCSCCCTTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred eecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 65554432 22344443 3455789999999999999999988654
No 11
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.97 E-value=1.4e-29 Score=224.92 Aligned_cols=194 Identities=20% Similarity=0.287 Sum_probs=160.0
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccccccccC
Q psy12217 57 MGNWALRVSVWFVAIAALVGNLAVLLVLISSRFRMTVPKFLMCNLAFADFCMGLYLIMIAIMDVRSIGDYFNHAIYWQRG 136 (262)
Q Consensus 57 ~~~~~~~~~~~~i~~~g~~gN~~vl~~~~~~~~~~~~~~~~l~nLaiaDll~~~~~~~~~~~~~~~~~~~~~~~~~w~~~ 136 (262)
....+..+++.+++++|++||+++++++.+++++|++.|++++|||++|++.++...|..+.... .|.++
T Consensus 19 ~~~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~----------~~~~~ 88 (488)
T 3eml_A 19 MGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIST----------GFCAA 88 (488)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHTHHHHHHHHTT----------CCEEC
T ss_pred cchhHHHHHHHHHHHHHHHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------ccccc
Confidence 34567888999999999999999999999999999999999999999999998888887664221 57777
Q ss_pred c-cchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccchhhHHHHHHHHHHHHHHHhhhcceeccCCCCc----
Q psy12217 137 M-GCQMAGFLTVFSSVLSIFTLTVITCERWYTITYAIHLNRRLKLSTATKIMVVGWVYSIAMAALPLFDVSNYSKT---- 211 (262)
Q Consensus 137 ~-~C~~~~~~~~~~~~~s~~~l~~isidRy~~i~~P~~~~~~~~~~~~~~~~~~~W~~s~~~~~~~~~~~~~~~~~---- 211 (262)
. .|++..++..++..+|++++++||+|||++|++|++|+...+++++..+++++|+++++++++|++++..+...
T Consensus 89 ~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~ 168 (488)
T 3eml_A 89 CHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGK 168 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGSTTTSCHHHHHHHHHHHHHHHHHHHTTGGGTCCSSCC-----
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEecccccccccCHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccc
Confidence 7 89999999999999999999999999999999999999999999999999999999999999998877654321
Q ss_pred ---eEEeecCCC-----CCCchhHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Q psy12217 212 ---SICLPMKNT-----NSTDSAYLI-FLLLFNGLAFWMICACYARMYSSIRGGTEGV 260 (262)
Q Consensus 212 ---~~C~~~~~~-----~~~~~~~~~-~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~~ 260 (262)
..|...+.. ......+.. ..++.+++|+++++++|.+|++.+||+.++.
T Consensus 169 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~y~~I~~~l~~~~~~~ 226 (488)
T 3eml_A 169 NHSQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLNIF 226 (488)
T ss_dssp --CCSSCTTCEECCHHHHSCHHHHHTTTHHHHTHHHHHHHHHHHHHHHHHHTCCCCHH
T ss_pred ccccccccccceeeccccccchhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 234332211 111122222 2455678999999999999999999987753
No 12
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=99.96 E-value=4.5e-29 Score=220.33 Aligned_cols=193 Identities=17% Similarity=0.249 Sum_probs=159.1
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccccccccC
Q psy12217 57 MGNWALRVSVWFVAIAALVGNLAVLLVLISSRFRMTVPKFLMCNLAFADFCMGLYLIMIAIMDVRSIGDYFNHAIYWQRG 136 (262)
Q Consensus 57 ~~~~~~~~~~~~i~~~g~~gN~~vl~~~~~~~~~~~~~~~~l~nLaiaDll~~~~~~~~~~~~~~~~~~~~~~~~~w~~~ 136 (262)
..+.++.+++.+++++|++||+++++++.+++++|++.|++++|||++|++.++. .|..+.... .+.|.+|
T Consensus 15 ~~~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~-~p~~~~~~~--------~~~~~~~ 85 (464)
T 4dkl_A 15 VTAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATST-LPFQSVNYL--------MGTWPFG 85 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHH-HHHHHHHHH--------HSSCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHH--------hCCcccc
Confidence 4467788899999999999999999999999999999999999999999998887 444443222 2369988
Q ss_pred c-cchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccchhhHHHHHHHHHHHHHHHhhhcceeccC--CCCceE
Q psy12217 137 M-GCQMAGFLTVFSSVLSIFTLTVITCERWYTITYAIHLNRRLKLSTATKIMVVGWVYSIAMAALPLFDVSN--YSKTSI 213 (262)
Q Consensus 137 ~-~C~~~~~~~~~~~~~s~~~l~~isidRy~~i~~P~~~~~~~~~~~~~~~~~~~W~~s~~~~~~~~~~~~~--~~~~~~ 213 (262)
. .|++..++..++..+|++++++||+|||++|++|++|+...+++++..+++++|++++++++|+++.... ..+...
T Consensus 86 ~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~~W~~~~~~~~p~~~~~~~~~~~~~~~ 165 (464)
T 4dkl_A 86 NILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFMATTKYRQGSID 165 (464)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSBCCEEETTEEE
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccHhHHhHHHHHHHHHHHHHHHHHheeecccCCCce
Confidence 8 8999999999999999999999999999999999999999999999999999999999999777664332 234567
Q ss_pred EeecCCCCCC--chhHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q psy12217 214 CLPMKNTNST--DSAYLI-FLLLFNGLAFWMICACYARMYSSIRGGTE 258 (262)
Q Consensus 214 C~~~~~~~~~--~~~~~~-~~~~~~~ip~~ii~~~y~~I~~~l~~~~~ 258 (262)
|...+..... ...|.. ..++.+++|+++++++|.+|++.+|++++
T Consensus 166 c~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~l~~~~~ 213 (464)
T 4dkl_A 166 CTLTFSHPTWYWENLLKICVFIFAFIMPVLIITVCYGLMILRLKSVRN 213 (464)
T ss_dssp CCBCCSSSHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHCCCCCS
T ss_pred EEeecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 8655444322 222333 33445789999999999999999998876
No 13
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=99.96 E-value=5.4e-29 Score=219.27 Aligned_cols=189 Identities=17% Similarity=0.262 Sum_probs=156.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccccccccCc-
Q psy12217 59 NWALRVSVWFVAIAALVGNLAVLLVLISSRFRMTVPKFLMCNLAFADFCMGLYLIMIAIMDVRSIGDYFNHAIYWQRGM- 137 (262)
Q Consensus 59 ~~~~~~~~~~i~~~g~~gN~~vl~~~~~~~~~~~~~~~~l~nLaiaDll~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~- 137 (262)
..++.+++.+++++|++||+++++++.+++++|++.|++++|||++|++.++...|..+.... .+.|.+|.
T Consensus 8 ~~~~~~~~~~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~--------~~~~~~~~~ 79 (452)
T 3rze_A 8 LMPLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLL--------MSKWSLGRP 79 (452)
T ss_dssp -CGGGTHHHHHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHH--------SSSCSSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH--------cCCccCCch
Confidence 345677889999999999999999999999999999999999999999998888887775443 23799888
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccchhhHHHHHHHHHHHHHHHhhhcceeccCCC------Cc
Q psy12217 138 GCQMAGFLTVFSSVLSIFTLTVITCERWYTITYAIHLNRRLKLSTATKIMVVGWVYSIAMAALPLFDVSNYS------KT 211 (262)
Q Consensus 138 ~C~~~~~~~~~~~~~s~~~l~~isidRy~~i~~P~~~~~~~~~~~~~~~~~~~W~~s~~~~~~~~~~~~~~~------~~ 211 (262)
.|++..++..++..+|++++++||+|||++|++|++|+...+++++..+++++|++++++++ |.+++..+. ..
T Consensus 80 ~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~-p~~~~~~~~~~~~~~~~ 158 (452)
T 3rze_A 80 LCLFWLSMDYVASTASIFSVFILCIDRYRSVQQPLRYLKYRTKTRASATILGAWFLSFLWVI-PILGWNHFMQQTSVRRE 158 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCCTTTTSSHHHHHHHHHHHHHHHGGGHH-HHHCCCC-------CCS
T ss_pred hHhHHHHHHHHHHHHHHHHHHHHHHHHHHheeCccccccccchhHHHHHHHHHHHHHHHHHH-HHHHHHhcccccccCCC
Confidence 89999999999999999999999999999999999999999999999999999999999874 555554432 23
Q ss_pred eEEeecCCCCCCchhHH-HHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q psy12217 212 SICLPMKNTNSTDSAYL-IFLLLFNGLAFWMICACYARMYSSIRGGTEG 259 (262)
Q Consensus 212 ~~C~~~~~~~~~~~~~~-~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~ 259 (262)
..|...+.. ...|. ...++.+++|+++++++|.+|++.+|++.++
T Consensus 159 ~~C~~~~~~---~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~ 204 (452)
T 3rze_A 159 DKCETDFYD---VTWFKVMTAIINFYLPTLLMLWFYAKIYKAVRQHCNI 204 (452)
T ss_dssp SSSCCSCTT---CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSCCCCCH
T ss_pred CeecCCCcc---cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence 456433322 23343 3445667899999999999999999988764
No 14
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.96 E-value=9.8e-30 Score=223.70 Aligned_cols=194 Identities=20% Similarity=0.314 Sum_probs=157.2
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccccccccc
Q psy12217 56 LMGNWALRVSVWFVAIAALVGNLAVLLVLISSRFRMTVPKFLMCNLAFADFCMGLYLIMIAIMDVRSIGDYFNHAIYWQR 135 (262)
Q Consensus 56 ~~~~~~~~~~~~~i~~~g~~gN~~vl~~~~~~~~~~~~~~~~l~nLaiaDll~~~~~~~~~~~~~~~~~~~~~~~~~w~~ 135 (262)
.....+..+++.+++++|++||+++++++.++|++|++.|++++|||++|++.++...|..+... ..|..
T Consensus 28 ~~~~~~~~~i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~~p~~~~~~----------~~~~~ 97 (447)
T 4eiy_A 28 IMGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIS----------TGFCA 97 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHH----------TTCEE
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------ccccc
Confidence 35567788889999999999999999999999999999999999999999999888888766422 24666
Q ss_pred Cc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccchhhHHHHHHHHHHHHHHHhhhcceeccCCCCc---
Q psy12217 136 GM-GCQMAGFLTVFSSVLSIFTLTVITCERWYTITYAIHLNRRLKLSTATKIMVVGWVYSIAMAALPLFDVSNYSKT--- 211 (262)
Q Consensus 136 ~~-~C~~~~~~~~~~~~~s~~~l~~isidRy~~i~~P~~~~~~~~~~~~~~~~~~~W~~s~~~~~~~~~~~~~~~~~--- 211 (262)
+. .|++..++..++..+|++++++||+|||++|++|++|+...+++++..+++++|++++++++||++++..+...
T Consensus 98 ~~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~Wi~s~~~~~~~~~~~~~~~~~~~~ 177 (447)
T 4eiy_A 98 ACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEG 177 (447)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHSCHHHHHHHHHHHHHHHHHHHTGGGGTCSSTTSCCHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHeEEecccccchhhhHHHHHHHHhHHHHHHHHHHHhhhheeccccccCcc
Confidence 77 89999999999999999999999999999999999999999999999999999999999999998877654321
Q ss_pred ----eEEeecCC-----CCCCchhHHHH-HHHHHHHHHHHHHHHHHHHHHHHhccccc
Q psy12217 212 ----SICLPMKN-----TNSTDSAYLIF-LLLFNGLAFWMICACYARMYSSIRGGTEG 259 (262)
Q Consensus 212 ----~~C~~~~~-----~~~~~~~~~~~-~~~~~~ip~~ii~~~y~~I~~~l~~~~~~ 259 (262)
..|...+. .......+... .++.+++|+++++++|.+|++.+||+.++
T Consensus 178 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~ 235 (447)
T 4eiy_A 178 KNHSQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLAD 235 (447)
T ss_dssp HHHHTTCCTTEEECCHHHHSCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccchhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 12422111 10111122221 23346899999999999999999998654
No 15
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.96 E-value=5.8e-28 Score=212.40 Aligned_cols=194 Identities=21% Similarity=0.238 Sum_probs=148.5
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccccccccC
Q psy12217 57 MGNWALRVSVWFVAIAALVGNLAVLLVLISSRFRMTVPKFLMCNLAFADFCMGLYLIMIAIMDVRSIGDYFNHAIYWQRG 136 (262)
Q Consensus 57 ~~~~~~~~~~~~i~~~g~~gN~~vl~~~~~~~~~~~~~~~~l~nLaiaDll~~~~~~~~~~~~~~~~~~~~~~~~~w~~~ 136 (262)
..+.+..+++.+++++|++||+++++++.++|++|++.|++++|||++|++.++. .|....... .+.|.++
T Consensus 123 ~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LAvsDll~~~~-~p~~~~~~~--------~~~~~~~ 193 (434)
T 4ea3_A 123 GLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLVLLT-LPFQGTDIL--------LGFWPFG 193 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHTT-HHHHHHHHH--------HTSCTTH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHeeeeeeecCccCchhHHHHHHHHHHHHHHHHH-hHHHHHHHH--------hcCCcCc
Confidence 3456677888899999999999999999999999999999999999999988444 444443322 1358888
Q ss_pred c-cchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccchhhHHHHHHHHHHHHHHHhhhcceecc--CCCCceE
Q psy12217 137 M-GCQMAGFLTVFSSVLSIFTLTVITCERWYTITYAIHLNRRLKLSTATKIMVVGWVYSIAMAALPLFDVS--NYSKTSI 213 (262)
Q Consensus 137 ~-~C~~~~~~~~~~~~~s~~~l~~isidRy~~i~~P~~~~~~~~~~~~~~~~~~~W~~s~~~~~~~~~~~~--~~~~~~~ 213 (262)
. .|++..++..++..+|++++++||+|||++|++|++|+...+++++..+++++|++++++++|+.+... .......
T Consensus 194 ~~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~ 273 (434)
T 4ea3_A 194 NALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHPIRALDVRTSSKAQAVNVAIWALASVVGVPVAIMGSAQVEDEEIE 273 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCSSCCC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhEEEcccccccccchhhhHHhhhhhhhHHHHHHhhHheeeeeEeecCcee
Confidence 8 899999999999999999999999999999999999999999999999999999999999876654222 2234456
Q ss_pred EeecCCCCCC--chhHHH-HHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q psy12217 214 CLPMKNTNST--DSAYLI-FLLLFNGLAFWMICACYARMYSSIRGGTEG 259 (262)
Q Consensus 214 C~~~~~~~~~--~~~~~~-~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~ 259 (262)
|......... ...|.. ...+.+++|+++++++|.+|++.+|+++++
T Consensus 274 c~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~ 322 (434)
T 4ea3_A 274 CLVEIPTPQDYWGPVFAICIFLFSFIVPVLVISVCYSLMIRRLRGVRLL 322 (434)
T ss_dssp EEECCCSSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCSSC
T ss_pred EEEecCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 7654443321 122333 334557899999999999999999987643
No 16
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.96 E-value=2.2e-28 Score=215.74 Aligned_cols=193 Identities=20% Similarity=0.342 Sum_probs=157.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHH-HHHHhhhhhccccccccccccccC
Q psy12217 58 GNWALRVSVWFVAIAALVGNLAVLLVLISSRFRMTVPKFLMCNLAFADFCMGLYL-IMIAIMDVRSIGDYFNHAIYWQRG 136 (262)
Q Consensus 58 ~~~~~~~~~~~i~~~g~~gN~~vl~~~~~~~~~~~~~~~~l~nLaiaDll~~~~~-~~~~~~~~~~~~~~~~~~~~w~~~ 136 (262)
....+.+++.+++++|++||+++++++.++|++|++.|++++|||++|++.++.. .|..+.... .+.|.++
T Consensus 33 ~~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~--------~~~~~~~ 104 (448)
T 2z73_A 33 VYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCF--------LKKWIFG 104 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHH--------TTSCCSH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHHHhccHHHHHHh--------cCCccCC
Confidence 3556778888999999999999999999999999999999999999999998764 454443222 2368888
Q ss_pred c-cchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccchhhHHHHHHHHHHHHHHHhhhcceeccCCC---Cce
Q psy12217 137 M-GCQMAGFLTVFSSVLSIFTLTVITCERWYTITYAIHLNRRLKLSTATKIMVVGWVYSIAMAALPLFDVSNYS---KTS 212 (262)
Q Consensus 137 ~-~C~~~~~~~~~~~~~s~~~l~~isidRy~~i~~P~~~~~~~~~~~~~~~~~~~W~~s~~~~~~~~~~~~~~~---~~~ 212 (262)
. .|++..++..++..+|++++++||+|||++|++|++|+++.++|++..+++++|+++++++++++++++.+. ...
T Consensus 105 ~~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~ 184 (448)
T 2z73_A 105 FAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLEGVLC 184 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTCCCCCHHHHHHHHHHHHHHHHHHHSGGGGTSSCEEECTTSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccceechhHHHHHHHHHHHHHHHHHHHHHhceeeeeecCCce
Confidence 8 899999999999999999999999999999999999999999999999999999999999988888665432 334
Q ss_pred EEeecCCCCC-CchhHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcccc
Q psy12217 213 ICLPMKNTNS-TDSAYLIF-LLLFNGLAFWMICACYARMYSSIRGGTE 258 (262)
Q Consensus 213 ~C~~~~~~~~-~~~~~~~~-~~~~~~ip~~ii~~~y~~I~~~l~~~~~ 258 (262)
.|...+.... ....|... .++.+++|+++++++|.+|++.+||++|
T Consensus 185 ~c~~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~ 232 (448)
T 2z73_A 185 NCSFDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEK 232 (448)
T ss_dssp SEEECCSCCSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred eEecccccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6765443322 22333333 3445789999999999999999987644
No 17
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.96 E-value=9.5e-29 Score=207.34 Aligned_cols=194 Identities=21% Similarity=0.282 Sum_probs=156.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccccccccCc-
Q psy12217 59 NWALRVSVWFVAIAALVGNLAVLLVLISSRFRMTVPKFLMCNLAFADFCMGLYLIMIAIMDVRSIGDYFNHAIYWQRGM- 137 (262)
Q Consensus 59 ~~~~~~~~~~i~~~g~~gN~~vl~~~~~~~~~~~~~~~~l~nLaiaDll~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~- 137 (262)
+....+++.+++++|++||+++++++.++|++|++.|+++.|||++|++.++...|..+.... .++|.+|+
T Consensus 11 ~~~~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~--------~~~~~~~~~ 82 (315)
T 4amj_A 11 EAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVV--------RGTWLWGSF 82 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH--------HSSCCSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHHhccHHHHHHh--------cCCeecccc
Confidence 556778888999999999999999999999999999999999999999998777776654332 24699998
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccchhhHHHHHHHHHHHHHHHhhhcceeccCCC---CceEE
Q psy12217 138 GCQMAGFLTVFSSVLSIFTLTVITCERWYTITYAIHLNRRLKLSTATKIMVVGWVYSIAMAALPLFDVSNYS---KTSIC 214 (262)
Q Consensus 138 ~C~~~~~~~~~~~~~s~~~l~~isidRy~~i~~P~~~~~~~~~~~~~~~~~~~W~~s~~~~~~~~~~~~~~~---~~~~C 214 (262)
.|++..++..++..+|.+++++||+|||++|++|++|++..++|++..+++++|+++++.+.+|........ +...|
T Consensus 83 ~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~c 162 (315)
T 4amj_A 83 LCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKC 162 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccchhhHHHhhhHHHHHHHHHHHHHHHHHhccccCCCcccc
Confidence 899999999999999999999999999999999999998899999999999999999999988876543322 22345
Q ss_pred eecCC--CCCCchhHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcccccc
Q psy12217 215 LPMKN--TNSTDSAYLIFL-LLFNGLAFWMICACYARMYSSIRGGTEGV 260 (262)
Q Consensus 215 ~~~~~--~~~~~~~~~~~~-~~~~~ip~~ii~~~y~~I~~~l~~~~~~~ 260 (262)
..... +......|.... .+.+++|+++++++|.+|.+.+|++.++.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~~~~~~~~~ 211 (315)
T 4amj_A 163 YQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKI 211 (315)
T ss_dssp HHCTTCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHTC----
T ss_pred ccccccchhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 33322 222334444433 34467999999999999999999876653
No 18
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.95 E-value=2.4e-28 Score=219.34 Aligned_cols=193 Identities=21% Similarity=0.322 Sum_probs=156.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccccccccCc
Q psy12217 58 GNWALRVSVWFVAIAALVGNLAVLLVLISSRFRMTVPKFLMCNLAFADFCMGLYLIMIAIMDVRSIGDYFNHAIYWQRGM 137 (262)
Q Consensus 58 ~~~~~~~~~~~i~~~g~~gN~~vl~~~~~~~~~~~~~~~~l~nLaiaDll~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~ 137 (262)
......+++.+++++|++||+++++++.++|++|++.|++++|||++|++.++...|..+.... .+.|.++.
T Consensus 181 ~~~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~--------~~~~~~~~ 252 (514)
T 3sn6_R 181 WVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHIL--------TKTWTFGN 252 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHH--------HTSCCSCS
T ss_pred HHHHHHHHHHHHHHHHHHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHHhCHHHHHHHH--------cCCeeCCc
Confidence 3566778899999999999999999999999999999999999999999998888887765443 23689998
Q ss_pred -cchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccchhhHHHHHHHHHHHHHHHhhhcce-eccCCCC--ceE
Q psy12217 138 -GCQMAGFLTVFSSVLSIFTLTVITCERWYTITYAIHLNRRLKLSTATKIMVVGWVYSIAMAALPLF-DVSNYSK--TSI 213 (262)
Q Consensus 138 -~C~~~~~~~~~~~~~s~~~l~~isidRy~~i~~P~~~~~~~~~~~~~~~~~~~W~~s~~~~~~~~~-~~~~~~~--~~~ 213 (262)
.|++..++..++..+|++++++||+|||++|++|++|+...+++++..+++++|+++++++.+|.. ++..+.. ...
T Consensus 253 ~~C~~~~~l~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~Wi~s~l~~~~p~~~~~~~~~~~~~~~ 332 (514)
T 3sn6_R 253 FWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAIN 332 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHCCHHHHHHHHHHHHHHHHHTTHHHHHTTTTC---CHHHH
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccchhccchHHHHHHHHHHHHHHHHHhhhhhccceecccCcccc
Confidence 899999999999999999999999999999999999998899999999999999999999877764 3333221 223
Q ss_pred EeecCC--CCCCchhHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q psy12217 214 CLPMKN--TNSTDSAYLI-FLLLFNGLAFWMICACYARMYSSIRGGTE 258 (262)
Q Consensus 214 C~~~~~--~~~~~~~~~~-~~~~~~~ip~~ii~~~y~~I~~~l~~~~~ 258 (262)
|..... .......|.. ..++.+++|+++++++|.+|++.+|++.+
T Consensus 333 c~~~~~~~~~~~~~~y~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~ 380 (514)
T 3sn6_R 333 CYAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQ 380 (514)
T ss_dssp HHHSSSCCCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeecccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 432221 2222334443 34556789999999999999999987644
No 19
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=98.64 E-value=9.6e-09 Score=55.35 Aligned_cols=31 Identities=32% Similarity=0.428 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHhhhhcccccccccchhh
Q psy12217 152 LSIFTLTVITCERWYTITYAIHLNRRLKLST 182 (262)
Q Consensus 152 ~s~~~l~~isidRy~~i~~P~~~~~~~~~~~ 182 (262)
+|++++++||+|||++|++|++|+...++++
T Consensus 2 ~Si~~L~~is~dRy~aI~~Pl~~~~~~t~~~ 32 (32)
T 1hll_A 2 SSIVHLCAISLDRYWSITQAIEYNLKRTPRR 32 (32)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGSSCCCCC
T ss_pred cHHHHHHHHHHHHHHHhhhhhhcccccCCCC
Confidence 6899999999999999999999987776653
No 20
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A
Probab=96.99 E-value=9.2e-05 Score=45.81 Aligned_cols=31 Identities=16% Similarity=0.129 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q psy12217 61 ALRVSVWFVAIAALVGNLAVLLVLISSRFRM 91 (262)
Q Consensus 61 ~~~~~~~~i~~~g~~gN~~vl~~~~~~~~~~ 91 (262)
++.++|.+++++|++||+++++++.++|..+
T Consensus 30 ~lp~~Y~lvFvlGl~GN~lvl~v~~~~~~~~ 60 (64)
T 2lot_A 30 LIPAIYMLVFLLGTTGNGLVLWTVFRKKGHH 60 (64)
T ss_dssp SSHHHHHHTTTTTTTSSSSHHHHHHHHSSSC
T ss_pred HHHHHHHHHHHHHHhhhhhheeeeeEecccc
Confidence 7788999999999999999999998877543
No 21
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=62.34 E-value=4.3 Score=33.51 Aligned_cols=29 Identities=55% Similarity=1.055 Sum_probs=18.9
Q ss_pred cCCCCCcceecCCCCCCCCccccchhhHH
Q psy12217 34 LSKNYHEVRCHPAPDAFNPCEDLMGNWAL 62 (262)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 62 (262)
...+....+|+|.||++.||++.+...++
T Consensus 321 ~c~~~~~v~C~P~PdafnPCedl~g~~~l 349 (350)
T 4ay9_X 321 LCNEVVDVTCSPKPDAFNPCEDIMGYNIL 349 (350)
T ss_dssp CSCCCCSCEEESCSCSSCCCCCC------
T ss_pred ccCCCCCceeecCCCCCCChhhhccChhh
Confidence 34445678899999999999998765543
No 22
>2rdd_B UPF0092 membrane protein YAJC; drug resistance, multidrug efflux, transporter, antiporter, novel transmembrane helix, ACRB, inner membrane; HET: AIC; 3.50A {Escherichia coli}
Probab=29.63 E-value=24 Score=18.64 Aligned_cols=22 Identities=14% Similarity=0.152 Sum_probs=12.6
Q ss_pred HHHHHH-HHHHHHHHHHHhcccc
Q psy12217 237 LAFWMI-CACYARMYSSIRGGTE 258 (262)
Q Consensus 237 ip~~ii-~~~y~~I~~~l~~~~~ 258 (262)
+|++++ .+.|..+.|--+|+.|
T Consensus 7 l~~v~~~~ifYFl~iRPQ~Kr~K 29 (37)
T 2rdd_B 7 LMLVVFGLIFYFMILRPQQKRTK 29 (37)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHH
Confidence 444443 5667777766655544
No 23
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=27.78 E-value=75 Score=17.56 Aligned_cols=13 Identities=8% Similarity=0.094 Sum_probs=6.3
Q ss_pred HHHHHHHhhcCCC
Q psy12217 79 AVLLVLISSRFRM 91 (262)
Q Consensus 79 ~vl~~~~~~~~~~ 91 (262)
+.++.++|+|+.+
T Consensus 29 ~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 29 LGIGLFMRRRHIV 41 (44)
T ss_dssp HHHHHHHHTTTCC
T ss_pred HHHHHHhhhhHhh
Confidence 4445555555433
No 24
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=24.34 E-value=98 Score=17.09 Aligned_cols=11 Identities=36% Similarity=0.431 Sum_probs=4.8
Q ss_pred HHHHHHHhhcC
Q psy12217 79 AVLLVLISSRF 89 (262)
Q Consensus 79 ~vl~~~~~~~~ 89 (262)
+++.+++|+|+
T Consensus 29 l~~~~~~RRR~ 39 (44)
T 2jwa_A 29 VVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHhheehhh
Confidence 33444444444
Done!