BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12224
(904 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VHE0|SEC63_MOUSE Translocation protein SEC63 homolog OS=Mus musculus GN=Sec63 PE=1
SV=4
Length = 760
Score = 496 bits (1276), Expect = e-139, Method: Compositional matrix adjust.
Identities = 279/661 (42%), Positives = 411/661 (62%), Gaps = 53/661 (8%)
Query: 13 GASEASIKKAYRKQSLILHPDKETGDEKAFMKLTKAYQALTDEESRRNFEKYGNPDGPGA 72
GA+ A IKK YR SL HPDK GDE FM++ KAY ALTDEESR+N+E++GNPDGP A
Sbjct: 114 GATVAEIKKQYRLLSLKYHPDK-GGDEVMFMRIAKAYAALTDEESRKNWEEFGNPDGPQA 172
Query: 73 MSFGIALPSYIVEKENSVWVLGLYALVFMVALPTAVGMWWYKSIRYTGDKVLLETINFYY 132
SFGIALP++IV+++NS+ VL +Y L FMV LP VG WWY+SIRY+GD++L+ T Y
Sbjct: 173 TSFGIALPAWIVDQKNSILVLLVYGLAFMVILPVVVGSWWYRSIRYSGDQILIRTTQIYT 232
Query: 133 AFFQITPHMALKRVLMILGASLEFDRRFNSEIIERPSDEIEVPQLIRQIPNLGEKNRERP 192
F T +M +KR++M+L + EFD ++N + RP+D I +PQLIR+I ++ K E P
Sbjct: 233 YFVYKTRNMDMKRLIMVLAGASEFDPQYNKDSTSRPTDNILIPQLIREIGSINLKKNEPP 292
Query: 193 LYHKYSIKARALIYAHLSNMQLTSETLEADRMYIVKKCPYLLQEMVTCISQLILLAYA-- 250
L YS+KAR L+ +HL+ M++ ETLE D+ +++KKCP LLQEMV I QLI++A +
Sbjct: 293 LTCPYSLKARVLLLSHLARMKI-PETLEEDQQFMLKKCPALLQEMVNVICQLIIMARSRE 351
Query: 251 QRVPRLIHIETLENVMKLCPMIVQGMWDFKNPLLQLPYVTDDHLKHFICKKRY-IKSLQQ 309
+R R + +LEN MKL M VQG+ FK+PLLQLP++ +D+L+ K+Y IK++Q
Sbjct: 352 EREFRAPTLASLENCMKLSQMAVQGLQQFKSPLLQLPHIEEDNLRRVSNHKKYKIKTIQD 411
Query: 310 FAQMKNEERRSVVKFMNDEQYSDMLKVLGNMPYVDLHVQPEVIDDEATTEYTAGAIITVT 369
+K +R S++ F+ DE+Y +++ VLG+ PYV + ++ +V+DDE + T G+++TV
Sbjct: 412 LVSLKESDRHSLLHFLEDEKYEEVMAVLGSFPYVTMDIKSQVLDDEDSNNITVGSLVTVL 471
Query: 370 CTLMRKPMSVLFGDDTIKVQFLEPSKEGEGEIEEEEEKPNGTITPVVNKEKQQTHRPVWM 429
L R+ M+ +F E E I EE+P NK K
Sbjct: 472 VKLTRQTMAEVF--------------EKEQSICAAEEQPTEDGQSDANKIK--------- 508
Query: 430 KNKKGGKKKKFTKNKHDKKSSGQKKITNTVEQTEAPADVAKVEKKDTPEESKDVSSES-- 487
KGG ++K K KS +K + P + +K+ + V SE+
Sbjct: 509 --AKGGWQQKNKGPKKMPKSKKKKPLKKKPTTVPLPQAKQQKQKQ----ANGVVGSEAAI 562
Query: 488 -EEESDLSDVENDEVVDKKEKNEDSNNKSEESSD-------------DDDDDWEKYQTGL 533
EEE D+SD +D +++E N DS ++ E+ SD DD+ +W++ Q +
Sbjct: 563 KEEEDDISDKGSDS--EEEETNRDSQSEKEDGSDRESDREQDEKQSKDDEAEWQELQQSI 620
Query: 534 NKRDK-VLEGRSKQSHSVHCPRFPEDKQEFWWIYISDRKSRTLLTSPYHITELVDQEQVQ 592
++++ +LE +SK +H V+ FPE+KQE+WW+YI+DRK +TL++ PYH+ L D E+V+
Sbjct: 621 QRKERALLETKSKITHPVYSLYFPEEKQEWWWLYIADRKEQTLISMPYHVCTLKDTEEVE 680
Query: 593 LKFTAPRWPGVYTFSVCLRCDSYLGFDQMQDIKLDVKEAPEVPTEHPQWEMSGEEDEGDE 652
LKF AP PG Y ++V LR DSY+G DQ++ +KL+V EA VP HPQW+ + E DE E
Sbjct: 681 LKFPAPGKPGNYQYTVFLRSDSYMGLDQIKPLKLEVHEAKPVPENHPQWDTAIEGDEDQE 740
Query: 653 E 653
+
Sbjct: 741 D 741
>sp|Q5R660|SEC63_PONAB Translocation protein SEC63 homolog OS=Pongo abelii GN=SEC63 PE=2
SV=1
Length = 761
Score = 494 bits (1271), Expect = e-138, Method: Compositional matrix adjust.
Identities = 270/658 (41%), Positives = 405/658 (61%), Gaps = 46/658 (6%)
Query: 13 GASEASIKKAYRKQSLILHPDKETGDEKAFMKLTKAYQALTDEESRRNFEKYGNPDGPGA 72
GA+ A IKK YR SL HPDK GDE FM++ KAY ALTDEESR+N+E++GNPDGP A
Sbjct: 114 GATVAEIKKQYRLLSLKYHPDK-GGDEVMFMRIAKAYAALTDEESRKNWEEFGNPDGPQA 172
Query: 73 MSFGIALPSYIVEKENSVWVLGLYALVFMVALPTAVGMWWYKSIRYTGDKVLLETINFYY 132
SFGIALP++IV+++NS+ VL +Y L FMV LP VG WWY+SIRY+GD++L+ T Y
Sbjct: 173 TSFGIALPAWIVDQKNSILVLLVYGLAFMVILPVVVGSWWYRSIRYSGDQILIRTTQIYT 232
Query: 133 AFFQITPHMALKRVLMILGASLEFDRRFNSEIIERPSDEIEVPQLIRQIPNLGEKNRERP 192
F T +M +KR++M+L + EFD ++N + RP+D I +PQLIR+I ++ K E P
Sbjct: 233 YFVYKTRNMDMKRLIMVLAGASEFDPQYNKDATSRPTDNILIPQLIREIGSINLKKNEPP 292
Query: 193 LYHKYSIKARALIYAHLSNMQLTSETLEADRMYIVKKCPYLLQEMVTCISQLILLA--YA 250
L YS+KAR L+ +HL+ M++ ETLE D+ +++KKCP LLQEMV I QLI++A
Sbjct: 293 LTCPYSLKARVLLLSHLARMKI-PETLEEDQQFMLKKCPALLQEMVNVICQLIVMARNRE 351
Query: 251 QRVPRLIHIETLENVMKLCPMIVQGMWDFKNPLLQLPYVTDDHLKHFICKKRY-IKSLQQ 309
+R R + +LEN MKL M VQG+ FK+PLLQLP++ +D+L+ K+Y IK++Q
Sbjct: 352 EREFRAPTLASLENCMKLSQMAVQGLQQFKSPLLQLPHIEEDNLRRVSNHKKYKIKTIQD 411
Query: 310 FAQMKNEERRSVVKFMNDEQYSDMLKVLGNMPYVDLHVQPEVIDDEATTEYTAGAIITVT 369
+K +R +++ F+ DE+Y +++ VLG+ PYV + ++ +V+DDE + T G+++TV
Sbjct: 412 LVSLKESDRHTLLHFLEDEKYEEVMAVLGSFPYVTMDIKSQVLDDEDSNNITVGSLVTVL 471
Query: 370 CTLMRKPMSVLF-GDDTIKVQFLEPSKEGEGEIEEEEEKPNGTITPVVNKEKQQTHRPVW 428
L R+ M+ +F + +I +P+++G+GE + K W
Sbjct: 472 VKLTRQTMAEVFEKEQSICAAEEQPAEDGQGETNKNRTKGG------------------W 513
Query: 429 MKNKKGGKKKKFTKNKHDKKSSGQKKI------------TNTVEQTEAPADVAKVEKKDT 476
+ KG KK +K K + N V EA K+
Sbjct: 514 QQKSKGPKKTAKSKKKKKPLKKKPTPVLLPQSKQQKQKQANGVVGNEAAV-------KED 566
Query: 477 PEESKDVSSESEEESDLSDVENDEVVDKKEKNEDSNNKSEESSDDDDDDWEKYQTGLNKR 536
EE D S+SEEE D ++++ + + E+ + DD+ +W++ Q + ++
Sbjct: 567 EEEVSDKGSDSEEEETNRDSQSEKD--DGSDRDSDREQDEKQNKDDEAEWQELQQSIQRK 624
Query: 537 DK-VLEGRSKQSHSVHCPRFPEDKQEFWWIYISDRKSRTLLTSPYHITELVDQEQVQLKF 595
++ +LE +SK +H V+ FPE+KQE+WW+YI+DRK +TL++ PYH+ L D E+V+LKF
Sbjct: 625 ERALLETKSKITHPVYSLYFPEEKQEWWWLYIADRKEQTLISMPYHVCTLKDTEEVELKF 684
Query: 596 TAPRWPGVYTFSVCLRCDSYLGFDQMQDIKLDVKEAPEVPTEHPQWEMSGEEDEGDEE 653
AP PG Y ++V LR DSY+G DQ++ +KL+V EA VP HPQW+ + E DE E+
Sbjct: 685 PAPGKPGNYQYTVFLRSDSYMGLDQIKPLKLEVHEAKPVPENHPQWDTAIEGDEDQED 742
>sp|Q9UGP8|SEC63_HUMAN Translocation protein SEC63 homolog OS=Homo sapiens GN=SEC63 PE=1
SV=2
Length = 760
Score = 493 bits (1268), Expect = e-138, Method: Compositional matrix adjust.
Identities = 271/657 (41%), Positives = 406/657 (61%), Gaps = 45/657 (6%)
Query: 13 GASEASIKKAYRKQSLILHPDKETGDEKAFMKLTKAYQALTDEESRRNFEKYGNPDGPGA 72
GA+ A IKK YR SL HPDK GDE FM++ KAY ALTDEESR+N+E++GNPDGP A
Sbjct: 114 GATVAEIKKQYRLLSLKYHPDK-GGDEVMFMRIAKAYAALTDEESRKNWEEFGNPDGPQA 172
Query: 73 MSFGIALPSYIVEKENSVWVLGLYALVFMVALPTAVGMWWYKSIRYTGDKVLLETINFYY 132
SFGIALP++IV+++NS+ VL +Y L FMV LP VG WWY+SIRY+GD++L+ T Y
Sbjct: 173 TSFGIALPAWIVDQKNSILVLLVYGLAFMVILPVVVGSWWYRSIRYSGDQILIRTTQIYT 232
Query: 133 AFFQITPHMALKRVLMILGASLEFDRRFNSEIIERPSDEIEVPQLIRQIPNLGEKNRERP 192
F T +M +KR++M+L + EFD ++N + RP+D I +PQLIR+I ++ K E P
Sbjct: 233 YFVYKTRNMDMKRLIMVLAGASEFDPQYNKDATSRPTDNILIPQLIREIGSINLKKNEPP 292
Query: 193 LYHKYSIKARALIYAHLSNMQLTSETLEADRMYIVKKCPYLLQEMVTCISQLILLA--YA 250
L YS+KAR L+ +HL+ M++ ETLE D+ +++KKCP LLQEMV I QLI++A
Sbjct: 293 LTCPYSLKARVLLLSHLARMKI-PETLEEDQQFMLKKCPALLQEMVNVICQLIVMARNRE 351
Query: 251 QRVPRLIHIETLENVMKLCPMIVQGMWDFKNPLLQLPYVTDDHLKHFICKKRY-IKSLQQ 309
+R R + +LEN MKL M VQG+ FK+PLLQLP++ +D+L+ K+Y IK++Q
Sbjct: 352 EREFRAPTLASLENCMKLSQMAVQGLQQFKSPLLQLPHIEEDNLRRVSNHKKYKIKTIQD 411
Query: 310 FAQMKNEERRSVVKFMNDEQYSDMLKVLGNMPYVDLHVQPEVIDDEATTEYTAGAIITVT 369
+K +R +++ F+ DE+Y +++ VLG+ PYV + ++ +V+DDE + T G+++TV
Sbjct: 412 LVSLKESDRHTLLHFLEDEKYEEVMAVLGSFPYVTMDIKSQVLDDEDSNNITVGSLVTVL 471
Query: 370 CTLMRKPMSVLF-GDDTIKVQFLEPSKEGEGEIEEEEEKPNGTITPVVNKEKQQTHRPVW 428
L R+ M+ +F + +I +P+++G+GE + K W
Sbjct: 472 VKLTRQTMAEVFEKEQSICAAEEQPAEDGQGETNKNRTKGG------------------W 513
Query: 429 MKNKKGGKKKKFTKNKHDKKSSGQKKI-----------TNTVEQTEAPADVAKVEKKDTP 477
+ KG KK +K K K + N V EA K+
Sbjct: 514 QQKSKGPKKTAKSKKKKPLKKKPTPVLLPQSKQQKQKQANGVVGNEAAV-------KEDE 566
Query: 478 EESKDVSSESEEESDLSDVENDEVVDKKEKNEDSNNKSEESSDDDDDDWEKYQTGLNKRD 537
EE D S+SEEE D ++++ + + E+ + DD+ +W++ Q + +++
Sbjct: 567 EEVSDKGSDSEEEETNRDSQSEKD--DGSDRDSDREQDEKQNKDDEAEWQELQQSIQRKE 624
Query: 538 K-VLEGRSKQSHSVHCPRFPEDKQEFWWIYISDRKSRTLLTSPYHITELVDQEQVQLKFT 596
+ +LE +SK +H V+ FPE+KQE+WW+YI+DRK +TL++ PYH+ L D E+V+LKF
Sbjct: 625 RALLETKSKITHPVYSLYFPEEKQEWWWLYIADRKEQTLISMPYHVCTLKDTEEVELKFP 684
Query: 597 APRWPGVYTFSVCLRCDSYLGFDQMQDIKLDVKEAPEVPTEHPQWEMSGEEDEGDEE 653
AP PG Y ++V LR DSY+G DQ++ +KL+V EA VP HPQW+ + E DE E+
Sbjct: 685 APGKPGNYQYTVFLRSDSYMGLDQIKPLKLEVHEAKPVPENHPQWDTAIEGDEDQED 741
>sp|Q9HGN7|SEC63_SCHPO Translocation protein sec63 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=sec63 PE=1 SV=1
Length = 611
Score = 142 bits (359), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 176/370 (47%), Gaps = 64/370 (17%)
Query: 13 GASEASIKKAYRKQSLILHPDKETG--------DEKAFMKLTKAYQALTDEESRRNFEKY 64
G S +++ Y++ S+ HPDK EK ++++T AY+ALTD+++R N+ Y
Sbjct: 108 GTSVDDVRRHYKRLSIKFHPDKVRNMVNTTREEVEKHYIEITNAYRALTDDKTRENYALY 167
Query: 65 GNPDGPGAMSFGIALPSYIVEKENSVWVLGLYALVFMVALPTAVGMWWYKSIRYTGDKVL 124
G PD P +S GIALP +I E ENS+++LG Y LVF + LP AVG WWY S YT D V
Sbjct: 168 GTPDVPQHISVGIALPKWISESENSIYILGFYGLVFGIVLPYAVGKWWYGSRTYTRDHVH 227
Query: 125 LETINFYYAFFQITPHMALKRVLMILGASLEFDRRFNSEIIERPSDEIEVPQLIRQIPNL 184
++T++ + F ++ + L +L + +S E L +PN
Sbjct: 228 VDTVDEW--FPKMETSLTLDELLSLFASSKE---------------------LTSLVPN- 263
Query: 185 GEKNRERPLYHKYSIKARALIYAHLSNMQLTSETLEADRMYIVKKCPYLLQEMVTCISQL 244
EKN + +Y +K L++ HL+ KK + S +
Sbjct: 264 -EKNPK-----EYILK---LLFDHLNR----------------KKTNNFNTHQILSQSDV 298
Query: 245 ILLAYAQRVPRLIHIETLENVMKLCPMIVQGM-WDFKNPLLQLPYVTDDHLKHFICKKRY 303
+L A ++NV+KL IVQ + D PLLQLP++ + +K+ R
Sbjct: 299 VLNALLSVATAFGFANPVDNVLKLWQHIVQAIPLDAPFPLLQLPHLLMEDVKNLSI--RN 356
Query: 304 IKSLQQFAQMKNEERRSVVKFMNDEQYSDMLKVLGNMPYVDLHVQPEVIDDEATTEY-TA 362
I S+ QF + E+ + + + Q +M ++ +P + + ++DD+ EY T
Sbjct: 357 ISSIPQFLSLSEEQTKDYLPNYSKNQLKEMREIANGIPRISVVAAKVLVDDD---EYITV 413
Query: 363 GAIITVTCTL 372
GAI + L
Sbjct: 414 GAIANLILDL 423
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
Query: 509 EDSNNKSEESSDDDDDDWEKYQTGLNKRDKVLEGRSKQSHSVHCPRFPEDKQEFWWIYIS 568
E S + +E ++ D++D EKY +D VL G + P F + + WWIY+
Sbjct: 434 EVSTDGTETATKKDEEDAEKYH---QSKDVVL-GDVETLPYAWAPYFTQHHKTAWWIYVV 489
Query: 569 DRKSRTLLTSPYHITELVDQ-EQVQLKFTAPRWPGVYTFSVCLRCDSYLGFDQMQDIKLD 627
D + ++ P+ IT++ ++ F P G ++F + + +SY+G D + ++ +
Sbjct: 490 DPRQNRVIVPPFSITDIPKTLRTFRIPFQVPPVAGTFSFQLHIMSNSYVGEDVISNLTMI 549
Query: 628 VKEAPEVPTEHPQWEMSGEEDEGDEEMGGSDVSEFTTDEDVEDD 671
VK+ + + + +S ED D + + +F+ DE++ D
Sbjct: 550 VKDTSVLQEQLQEEAVSDLEDNSDIDESANAGKDFSDDENIGSD 593
>sp|P14906|SEC63_YEAST Protein translocation protein SEC63 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SEC63 PE=1 SV=2
Length = 663
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 150/342 (43%), Gaps = 61/342 (17%)
Query: 12 SGASEASIKKAYRKQSLILHPDKE----TGDEKAFM-----KLTKAYQALTDEESRRNFE 62
+ AS+ IK AYRK S+ HPDK T DEK+ M ++TKAY++LTDE R+N+
Sbjct: 134 TSASDRDIKSAYRKLSVKFHPDKLAKGLTPDEKSVMEETYVQITKAYESLTDELVRQNYL 193
Query: 63 KYGNPDGPGAMSFGIALPSYIVEKENSVWVLGLYALVFMVALPTAVGMWWYKSIRYTGDK 122
KYG+PDGP + S GIALP ++V+ S ++ Y + + LP V WW ++ YT
Sbjct: 194 KYGHPDGPQSTSHGIALPRFLVDGSASPLLVVCYVALLGLILPYFVSRWWARTQSYTKKG 253
Query: 123 VLLETI-NFYYAFFQITPH--MALKRVLMILGASLEFDRRFNSEIIERPSDEIEVPQLIR 179
+ T NF P + +L L + EF + F
Sbjct: 254 IHNVTASNFVSNLVNYKPSEIVTTDLILHWLSFAHEFKQFF------------------- 294
Query: 180 QIPNLGEKNRERPLYHKYSIKARALIYAHLSNMQLTSETLEADRMYIVKKCPYLLQEMVT 239
P+L + E+ L+ H++ S L + IV KC LL ++
Sbjct: 295 --PDLQPTDFEK------------LLQDHINRRD--SGKLNNAKFRIVAKCHSLLHGLLD 338
Query: 240 CISQLILLAYAQRVPRLIHIETLENVMKLCPMIVQGMWDFKNPLLQLPYVTDDHLKHFIC 299
I + L I T + +++ P+ +LQLP V + HFI
Sbjct: 339 -----IACGFRNLDIALGAINTFKCIVQAVPLTPNCQ------ILQLPNVDKE---HFIT 384
Query: 300 KKRYIKSLQQFAQMKNEERRSVVKFMNDEQYSDMLKVLGNMP 341
K I +L + +++ + V+ + + ++ L+V ++P
Sbjct: 385 KTGDIHTLGKLFTLEDAKIGEVLGIKDQAKLNETLRVASHIP 426
>sp|O75643|U520_HUMAN U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Homo sapiens
GN=SNRNP200 PE=1 SV=2
Length = 2136
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 106/219 (48%), Gaps = 27/219 (12%)
Query: 163 EIIERPSDEIEVP------QLIRQIPNLGEKNRERPLYHKYSIKARALIYAHLSNMQLTS 216
EII ++ +P L+RQ+ P ++ +K L+ AHLS MQL++
Sbjct: 1847 EIISNAAEYENIPIRHHEDNLLRQLAQKVPHKLNNPKFNDPHVKTNLLLQAHLSRMQLSA 1906
Query: 217 ETLEADRMYIVKKCPYLLQEMVTCISQLILLAYAQRVPRLIHIETLENVMKLCPMIVQGM 276
E L++D I+ K L+Q V +S L+ P L M+L M+ Q M
Sbjct: 1907 E-LQSDTEEILSKAIRLIQACVDVLSSNGWLS-----PAL-------AAMELAQMVTQAM 1953
Query: 277 WDFKNPLLQLPYVTDDHLKHFICKKRYIKSLQQFAQMKNEERRSVVKFMNDEQYSDMLKV 336
W + L QLP+ T +H+K C + ++S+ +M++EER ++++ + D Q +D+ +
Sbjct: 1954 WSKDSYLKQLPHFTSEHIKR--CTDKGVESVFDIMEMEDEERNALLQ-LTDSQIADVARF 2010
Query: 337 LGNMPYVDLHVQPEVIDDEATTEYTAGAIITVTCTLMRK 375
P ++L EV+D ++ +G + V L R+
Sbjct: 2011 CNRYPNIELSY--EVVDKDSI---RSGGPVVVLVQLERE 2044
Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 540 LEGRSKQSHSVHCPRFPEDKQEFWWIYISDRKSRTLLTSPYHITELVDQE--QVQLKFTA 597
LE + + V P FP+ ++E WW+ I D KS +L++ I L Q+ +V+L F A
Sbjct: 2041 LEREEEVTGPVIAPLFPQKREEGWWVVIGDAKSNSLIS----IKRLTLQQKAKVKLDFVA 2096
Query: 598 PRWPGVYTFSVCLRCDSYLGFDQMQDIKLDVKEA 631
P G + +++ D+Y+G DQ +DVKEA
Sbjct: 2097 PA-TGAHNYTLYFMSDAYMGCDQEYKFSVDVKEA 2129
Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 19/124 (15%)
Query: 164 IIERPSDEIEVPQLIRQIPNLGEKNRERPLYHKYSIKARALIYAHLSNMQLTSETLEADR 223
I R +++E+ +L+ ++P +++ E P S K L+ A +S ++L L AD
Sbjct: 1027 ITVREEEKLELQKLLERVPIPVKESIEEP-----SAKINVLLQAFISQLKLEGFALMADM 1081
Query: 224 MYIVKKCPYLLQEMVTCISQLIL-LAYAQRVPRLIHIETLENVMKLCPMIVQGMWDFKNP 282
+Y+ + L++ I +++L +AQ + + LC MI + MW P
Sbjct: 1082 VYVTQSAGRLMR----AIFEIVLNRGWAQLT---------DKTLNLCKMIDKRMWQSMCP 1128
Query: 283 LLQL 286
L Q
Sbjct: 1129 LRQF 1132
>sp|Q9VUV9|U520_DROME Putative U5 small nuclear ribonucleoprotein 200 kDa helicase
OS=Drosophila melanogaster GN=CG5931 PE=2 SV=4
Length = 2142
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 131/277 (47%), Gaps = 37/277 (13%)
Query: 101 MVALPTAVGMWW-YKSIRYTGDKVLLETINFYYAFFQITPHMALKRVLMILGASLEFDRR 159
M LP +GM Y I YT TI + + ++ +L I+ ++ E++
Sbjct: 1807 MDTLPLNLGMIAAYYYINYT-------TIELFS--LSLNSKTKVRGLLEIISSAAEYE-- 1855
Query: 160 FNSEIIERPSDEIEVPQLIRQIPN-LGEKNRERPLYHKYSIKARALIYAHLSNMQLTSET 218
+++ R +E + L +++PN L N P ++ IK L+ AHLS +QL E
Sbjct: 1856 ---DVVVRHHEEQVLRTLSQRLPNKLTGPNETAPKFNDPHIKTNLLLQAHLSRLQLGPE- 1911
Query: 219 LEADRMYIVKKCPYLLQEMVTCISQLILLAYAQRVPRLIHIETLENVMKLCPMIVQGMWD 278
L+ D I+ K L+Q V +S L+ A M+L M+ Q MW
Sbjct: 1912 LQGDTEQILSKAIRLIQACVDVLSSNGWLSPAV------------AAMELAQMVTQAMWS 1959
Query: 279 FKNPLLQLPYVTDDHLKHFICKKRYIKSLQQFAQMKNEERRSVVKFMNDEQYSDMLKVLG 338
+ L QLP+ + + +K C ++ I+++ ++++E+R +++ ++D Q +D+ +
Sbjct: 1960 KDSYLKQLPHFSPEIVKR--CTEKKIETVFDIMELEDEDRTRLLQ-LSDLQMADVARFCN 2016
Query: 339 NMPYVDLHVQPEVIDDEATTEYTAGAIITVTCTLMRK 375
P ++L+ EV+D + +G+ + V L R+
Sbjct: 2017 RYPNIELNY--EVVDKD---RINSGSTVNVVVQLERE 2048
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Query: 540 LEGRSKQSHSVHCPRFPEDKQEFWWIYISDRKSRTLLTSPYHITELVDQE--QVQLKFTA 597
LE + + V P FP+ ++E WW+ I D K+ +LL+ I L Q+ +V+L F A
Sbjct: 2045 LEREDEVTGPVIAPFFPQKREEGWWVVIGDPKTNSLLS----IKRLTLQQKAKVKLDFVA 2100
Query: 598 PRWPGVYTFSVCLRCDSYLGFDQMQDIKLDV 628
P PG + +++ DSYLG DQ ++V
Sbjct: 2101 PS-PGKHDYTLYYMSDSYLGCDQEYKFSIEV 2130
Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 60/126 (47%), Gaps = 17/126 (13%)
Query: 167 RPSDEIEVPQLIRQIPNLGEKNRERPLYHKYSIKARALIYAHLSNMQLTSETLEADRMYI 226
R +++E+ +L+ ++P +++ E ++S K L+ A++S ++L L +D ++I
Sbjct: 1030 REEEKLELQKLMERVPIPIKESIE-----EHSAKVNVLLQAYISQLKLEGFALMSDMVFI 1084
Query: 227 VKKCPYLLQEMVTCISQLILLAYAQRVPRLIHIETLENVMKLCPMIVQGMWDFKNPLLQL 286
+ L++ + + + +AQ + + LC MI + MW PL Q
Sbjct: 1085 TQSAARLMRAIFEIV---LTRGWAQLA---------DKTLTLCKMIDRRMWQSMTPLRQF 1132
Query: 287 PYVTDD 292
+ D+
Sbjct: 1133 KKMPDE 1138
>sp|Q9U2G0|U520_CAEEL Putative U5 small nuclear ribonucleoprotein 200 kDa helicase
OS=Caenorhabditis elegans GN=Y46G5A.4 PE=3 SV=1
Length = 2145
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Query: 550 VHCPRFPED-KQEFWWIYISDRKSRTLLTSPYHITELVDQEQ--VQLKFTAPRWPGVYTF 606
V P FP+ K+E WW+ I D +S LLT I LV E+ VQL F APR PG + F
Sbjct: 2052 VVAPLFPQKRKEEGWWLVIGDSESNALLT----IKRLVINEKSSVQLDFAAPR-PGHHKF 2106
Query: 607 SVCLRCDSYLGFDQMQDIKLDVKE 630
+ DSYLG DQ D+ V+E
Sbjct: 2107 KLFFISDSYLGADQEFDVAFKVEE 2130
Score = 50.1 bits (118), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 112/230 (48%), Gaps = 33/230 (14%)
Query: 129 NFYYAFFQITP--HMALK-----RVLM-ILGASLEFDRRFNSEIIERPSDEIEVPQLIRQ 180
++YY +Q M+LK R L+ I+ AS EF + R +++ + QL +
Sbjct: 1819 SYYYISYQTIELFSMSLKEKTKTRALIEIISASSEF-----GNVPMRHKEDVILRQLAER 1873
Query: 181 IPNLGEKNRERPLYHKYSIKARALIYAHLSNMQLTSETLEADRMYIVKKCPYLLQEMVTC 240
+P G+ ++ + +K LI+AHLS ++LT+E L D IV + L+Q V
Sbjct: 1874 LP--GQLKNQK--FTDPHVKVNLLIHAHLSRVKLTAE-LNKDTELIVLRACRLVQACVDV 1928
Query: 241 ISQLILLAYAQRVPRLIHIETLENVMKLCPMIVQGMWDFKNPLLQLPYVTDDHLKHFICK 300
+S L+ A IH M+L M+ Q M+ + L QLP+ + L+ K
Sbjct: 1929 LSSNGWLSPA------IH------AMELSQMLTQAMYSNEPYLKQLPHCSAALLER--AK 1974
Query: 301 KRYIKSLQQFAQMKNEERRSVVKFMNDEQYSDMLKVLGNMPYVDLHVQPE 350
+ + S+ + +++N++R +++ M + +D+ + + P +++ + E
Sbjct: 1975 AKEVTSVFELLELENDDRSDILQ-MEGAELADVARFCNHYPSIEVATELE 2023
Score = 36.6 bits (83), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 13/106 (12%)
Query: 198 SIKARALIYAHLSNMQLTSETLEADRMYIVKKCPYLLQEMVTCISQLILLAYAQRVPRLI 257
S K L+ A++S ++L L+AD +++ + L + + + AQ+
Sbjct: 1049 SAKTNVLLQAYISQLKLEGFALQADMVFVAQSAGRLFRALFEIVLWRGWAGLAQK----- 1103
Query: 258 HIETLENVMKLCPMIVQGMWDFKNPLLQLPYVTDDHLKHFICKKRY 303
V+ LC M+ Q W NPL Q + + ++ I KK Y
Sbjct: 1104 -------VLTLCKMVTQRQWGSLNPLHQFKKIPSEVVRS-IDKKNY 1141
>sp|F1LPQ2|ASCC3_RAT Activating signal cointegrator 1 complex subunit 3 OS=Rattus
norvegicus GN=Ascc3 PE=2 SV=1
Length = 2197
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 546 QSHSVHCPRFPEDKQEFWWIYISDRKSRTLLTSPYHITELVDQEQVQLKFTAPRWPGVYT 605
+SH+V PRFP+ K E W++ + + R L+ + + + + F P PG Y
Sbjct: 2099 ESHAV-TPRFPKLKDEGWFLILGEVDKRELVAVK-RVGFVRTHHEASISFFTPEAPGRYI 2156
Query: 606 FSVCLRCDSYLGFDQMQDIKLDVKEA---PEVPTEHP 639
F++ L D YLG DQ DI L+V +A ++ TE P
Sbjct: 2157 FTLYLMSDCYLGLDQQYDIFLNVTKADISTQINTEVP 2193
Score = 34.7 bits (78), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 39/98 (39%), Gaps = 12/98 (12%)
Query: 200 KARALIYAHLSNMQLTSETLEADRMYIVKKCPYLLQEMVTCISQLILLAYAQRVPRLIHI 259
KA L+ AHLS L + D ++ + + Q M+ + L
Sbjct: 1890 KAHLLLQAHLSRAMLPCPDYDTDTKTVLDQALRVCQAMLDVAASQGWLV----------- 1938
Query: 260 ETLENVMKLCPMIVQGMWDFKNPLLQLPYVTDDHLKHF 297
T N+ L M++QG W + LL +P + HL F
Sbjct: 1939 -TTLNITHLIQMVIQGRWLKDSSLLTIPNIEQHHLHLF 1975
>sp|E1BNG3|ASCC3_BOVIN Activating signal cointegrator 1 complex subunit 3 OS=Bos taurus
GN=ascc3 PE=3 SV=1
Length = 2201
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 10/137 (7%)
Query: 503 DKKEKNEDSNNKSEESSDDDDDDWEKY--------QTGLNKRDKVLEGRSKQSHSVHCPR 554
D E +++ + + S D+ W + Q L + + SH+V PR
Sbjct: 2048 DAAEGHDEISITTVASDKHSDNRWVRLHADQEYVLQVSLQRVSLGFHKGKQDSHAV-TPR 2106
Query: 555 FPEDKQEFWWIYISDRKSRTLLTSPYHITELVDQEQVQLKFTAPRWPGVYTFSVCLRCDS 614
FP+ K E W++ + + R L+ + + V + F P PG Y +++ D
Sbjct: 2107 FPKSKDEGWFLILGEVDKRELIALK-RVGYVRSHHMVSISFYTPEVPGRYIYTLYFMSDC 2165
Query: 615 YLGFDQMQDIKLDVKEA 631
YLG DQ DI L V A
Sbjct: 2166 YLGLDQQYDIHLHVTPA 2182
Score = 38.5 bits (88), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 12/98 (12%)
Query: 200 KARALIYAHLSNMQLTSETLEADRMYIVKKCPYLLQEMVTCISQLILLAYAQRVPRLIHI 259
KA L+ AHLS L + D ++ + + Q M+ + L
Sbjct: 1890 KAHLLLQAHLSRTMLPCPDYDTDTKTVLDQALRVCQAMLDVAAHQGWLV----------- 1938
Query: 260 ETLENVMKLCPMIVQGMWDFKNPLLQLPYVTDDHLKHF 297
T+ N+ L M++QG W + LL +P++ + HL F
Sbjct: 1939 -TVLNITSLVQMVIQGRWLKDSSLLTIPHIENHHLHIF 1975
>sp|Q9Y2G8|DJC16_HUMAN DnaJ homolog subfamily C member 16 OS=Homo sapiens GN=DNAJC16
PE=2 SV=3
Length = 782
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 8/66 (12%)
Query: 3 GKSRTPLKPSGASEASIKKAYRKQSLILHPDK--ETGDEKAFMKLTKAYQALTDEESRRN 60
G SRT AS+A IKKAY+K + HPDK + G E F++++KAY+ L++EE R N
Sbjct: 35 GVSRT------ASQADIKKAYKKLAREWHPDKNKDPGAEDKFIQISKAYEILSNEEKRSN 88
Query: 61 FEKYGN 66
+++YG+
Sbjct: 89 YDQYGD 94
>sp|Q5RCM7|DJC16_PONAB DnaJ homolog subfamily C member 16 OS=Pongo abelii GN=DNAJC16
PE=2 SV=1
Length = 782
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 8/66 (12%)
Query: 3 GKSRTPLKPSGASEASIKKAYRKQSLILHPDK--ETGDEKAFMKLTKAYQALTDEESRRN 60
G SRT AS+A IKKAY+K + HPDK + G E F++++KAY+ L++EE R N
Sbjct: 35 GVSRT------ASQADIKKAYKKLAREWHPDKNKDPGAEDKFIQISKAYEILSNEEKRSN 88
Query: 61 FEKYGN 66
+++YG+
Sbjct: 89 YDQYGD 94
>sp|Q09912|PSI1_SCHPO Protein psi1 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=psi1 PE=2 SV=2
Length = 379
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 14 ASEASIKKAYRKQSLILHPDKETGDEKAFMKLTKAYQALTDEESRRNFEKYGNPDG 69
ASEA +KKAYRK +L HPDK EK F +++ AY+ L+D + R+ +++YG +G
Sbjct: 17 ASEAELKKAYRKLALKYHPDKNPNGEKKFKEISLAYEVLSDPQRRKLYDQYGITEG 72
>sp|Q6ME07|DNAJ_PARUW Chaperone protein DnaJ OS=Protochlamydia amoebophila (strain
UWE25) GN=dnaJ PE=3 SV=1
Length = 386
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 41/56 (73%), Gaps = 3/56 (5%)
Query: 13 GASEASIKKAYRKQSLILHPDKETGD---EKAFMKLTKAYQALTDEESRRNFEKYG 65
GA+ IKKAYRK+++ HPDK GD EK F ++++AY+ L+DE+ R+ +++YG
Sbjct: 13 GATPEEIKKAYRKKAVQYHPDKNPGDADAEKRFKEISEAYEVLSDEKKRQVYDRYG 68
>sp|Q892R1|DNAJ_CLOTE Chaperone protein DnaJ OS=Clostridium tetani (strain
Massachusetts / E88) GN=dnaJ PE=3 SV=1
Length = 375
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%), Gaps = 5/65 (7%)
Query: 13 GASEASIKKAYRKQSLILHPDKETGDEKA---FMKLTKAYQALTDEESRRNFEKYGNPD- 68
GA++A IKKA+RK +L HPDK G+++A F ++ +AYQ L+D + R ++++G D
Sbjct: 15 GANDAEIKKAFRKLALKYHPDKNAGNKEAEERFKEINEAYQVLSDPQKRAQYDQFGTADF 74
Query: 69 -GPGA 72
G GA
Sbjct: 75 NGGGA 79
>sp|Q5FVM7|DJC16_RAT DnaJ homolog subfamily C member 16 OS=Rattus norvegicus
GN=Dnajc16 PE=2 SV=1
Length = 771
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 8/66 (12%)
Query: 3 GKSRTPLKPSGASEASIKKAYRKQSLILHPDK--ETGDEKAFMKLTKAYQALTDEESRRN 60
G SRT AS+A IKKAY+K + HPDK + G E F++++KAY+ L++EE R N
Sbjct: 35 GVSRT------ASQADIKKAYKKLAREWHPDKNKDPGAEDKFIQISKAYEILSNEEKRTN 88
Query: 61 FEKYGN 66
++ YG+
Sbjct: 89 YDHYGD 94
>sp|Q80TN4|DJC16_MOUSE DnaJ homolog subfamily C member 16 OS=Mus musculus GN=Dnajc16
PE=1 SV=2
Length = 772
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 8/66 (12%)
Query: 3 GKSRTPLKPSGASEASIKKAYRKQSLILHPDK--ETGDEKAFMKLTKAYQALTDEESRRN 60
G SRT AS+A IKKAY+K + HPDK + G E F++++KAY+ L++EE R N
Sbjct: 35 GVSRT------ASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTN 88
Query: 61 FEKYGN 66
++ YG+
Sbjct: 89 YDHYGD 94
>sp|Q5ZKZ4|DJC16_CHICK DnaJ homolog subfamily C member 16 OS=Gallus gallus GN=DNAJC16
PE=2 SV=1
Length = 777
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 45/67 (67%), Gaps = 6/67 (8%)
Query: 6 RTPLKPSG----ASEASIKKAYRKQSLILHPDK--ETGDEKAFMKLTKAYQALTDEESRR 59
R P + G +S+A IKKAY++ + HPDK + G E F++++KAY+ L++EE R
Sbjct: 27 RDPYRVLGVGRSSSQADIKKAYKRLARQWHPDKNKDPGAEDKFIQISKAYEILSNEEKRA 86
Query: 60 NFEKYGN 66
NF++YG+
Sbjct: 87 NFDRYGD 93
>sp|P25685|DNJB1_HUMAN DnaJ homolog subfamily B member 1 OS=Homo sapiens GN=DNAJB1 PE=1
SV=4
Length = 340
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 13 GASEASIKKAYRKQSLILHPD--KETGDEKAFMKLTKAYQALTDEESRRNFEKYG 65
GAS+ IK+AYR+Q+L HPD KE G E+ F ++ +AY L+D R F++YG
Sbjct: 14 GASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYG 68
>sp|Q3MI00|DNJB1_BOVIN DnaJ homolog subfamily B member 1 OS=Bos taurus GN=DNAJB1 PE=2
SV=3
Length = 340
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 13 GASEASIKKAYRKQSLILHPD--KETGDEKAFMKLTKAYQALTDEESRRNFEKYG 65
GAS+ IK+AYR+Q+L HPD KE G E+ F ++ +AY L+D R F++YG
Sbjct: 14 GASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYG 68
>sp|Q9QYJ3|DNJB1_MOUSE DnaJ homolog subfamily B member 1 OS=Mus musculus GN=Dnajb1 PE=2
SV=3
Length = 340
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 13 GASEASIKKAYRKQSLILHPD--KETGDEKAFMKLTKAYQALTDEESRRNFEKYG 65
GAS+ IK+AYR+Q+L HPD KE G E+ F ++ +AY L+D R F++YG
Sbjct: 14 GASDDEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYG 68
>sp|Q6AN63|DNAJ_DESPS Chaperone protein DnaJ OS=Desulfotalea psychrophila (strain LSv54
/ DSM 12343) GN=dnaJ PE=3 SV=1
Length = 373
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 3/56 (5%)
Query: 14 ASEASIKKAYRKQSLILHPDKETGDEKA---FMKLTKAYQALTDEESRRNFEKYGN 66
A + +IKKAYRK ++ HPD+ GD++A F + T+AY+ L DE RR ++ YG+
Sbjct: 15 ADQGTIKKAYRKLAMKYHPDRNQGDKEAETLFKECTEAYEVLRDESKRRIYDTYGH 70
>sp|Q8CP18|DNAJ_STAES Chaperone protein DnaJ OS=Staphylococcus epidermidis (strain ATCC
12228) GN=dnaJ PE=3 SV=1
Length = 373
Score = 53.5 bits (127), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 42/59 (71%), Gaps = 3/59 (5%)
Query: 14 ASEASIKKAYRKQSLILHPD--KETGDEKAFMKLTKAYQALTDEESRRNFEKYGNPDGP 70
AS+ IKKAYRK S HPD KE G ++ F ++++AY+ L+DE R N++++G+ DGP
Sbjct: 16 ASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDENKRANYDQFGH-DGP 73
>sp|A7I2G3|DNAJ_CAMHC Chaperone protein DnaJ OS=Campylobacter hominis (strain ATCC
BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=dnaJ PE=3
SV=1
Length = 359
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 11 PSGASEASIKKAYRKQSLILHPDKETGDEKA---FMKLTKAYQALTDEESRRNFEKYGNP 67
P A IKKA+RK +L HPD+ GD++A F ++ +AYQ L ++E R+ +++YG
Sbjct: 11 PKDADSDEIKKAFRKLALKYHPDRNAGDKEAEEKFKEINEAYQVLGNDERRQTYDRYGKE 70
Query: 68 DGPGAMS 74
GA
Sbjct: 71 GLNGAFG 77
>sp|A0Q1R3|DNAJ_CLONN Chaperone protein DnaJ OS=Clostridium novyi (strain NT) GN=dnaJ
PE=3 SV=1
Length = 376
Score = 53.1 bits (126), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 41/59 (69%), Gaps = 3/59 (5%)
Query: 13 GASEASIKKAYRKQSLILHPDKETGDEKA---FMKLTKAYQALTDEESRRNFEKYGNPD 68
GAS+ IKKAYRK ++ HPD+ G+++A F + +AYQ L+D + + N++++G+ D
Sbjct: 15 GASDDEIKKAYRKLAMKYHPDRNQGNKEAEEKFKDINEAYQVLSDPQKKANYDQFGSAD 73
>sp|Q9FH28|DNJ49_ARATH Chaperone protein dnaJ 49 OS=Arabidopsis thaliana GN=ATJ49 PE=2
SV=2
Length = 354
Score = 53.1 bits (126), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 35/49 (71%), Gaps = 2/49 (4%)
Query: 19 IKKAYRKQSLILHPDKET--GDEKAFMKLTKAYQALTDEESRRNFEKYG 65
I+KAYRK SL +HPDK G E+AF K++KA+ L+D SRR F++ G
Sbjct: 115 IRKAYRKLSLKVHPDKNKAPGSEEAFKKVSKAFTCLSDGNSRRQFDQVG 163
>sp|Q5HNW7|DNAJ_STAEQ Chaperone protein DnaJ OS=Staphylococcus epidermidis (strain ATCC
35984 / RP62A) GN=dnaJ PE=3 SV=1
Length = 373
Score = 53.1 bits (126), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 42/59 (71%), Gaps = 3/59 (5%)
Query: 14 ASEASIKKAYRKQSLILHPD--KETGDEKAFMKLTKAYQALTDEESRRNFEKYGNPDGP 70
AS+ IKKAYRK S HPD KE G ++ F ++++AY+ L+DE R N++++G+ DGP
Sbjct: 16 ASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDENKRVNYDQFGH-DGP 73
>sp|Q6VAY5|DNAJ_PSEST Chaperone protein DnaJ OS=Pseudomonas stutzeri GN=dnaJ PE=3 SV=1
Length = 376
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 3/57 (5%)
Query: 13 GASEASIKKAYRKQSLILHPDKETGD---EKAFMKLTKAYQALTDEESRRNFEKYGN 66
GASEA +KKAYR+ ++ HPD+ GD E+AF + +AY+ L+D R +++YG+
Sbjct: 15 GASEAELKKAYRRLAMKHHPDRNPGDKAAEEAFKEANEAYEVLSDPSKRAAYDQYGH 71
>sp|Q5FGQ8|DNAJ_EHRRG Chaperone protein DnaJ OS=Ehrlichia ruminantium (strain Gardel)
GN=dnaJ PE=3 SV=1
Length = 382
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Query: 14 ASEASIKKAYRKQSLILHPDKETGDEKA---FMKLTKAYQALTDEESRRNFEKYGN---P 67
A+ IKKAYRK +L HPDK GD+ A F +L++AY L D++ R +++YG+
Sbjct: 16 ATPEEIKKAYRKMALKYHPDKNPGDKAAEEKFKELSEAYDVLIDKDKRAAYDRYGHSAFS 75
Query: 68 DGPGAMSF 75
DG G F
Sbjct: 76 DGSGRGGF 83
>sp|Q5HCG4|DNAJ_EHRRW Chaperone protein DnaJ OS=Ehrlichia ruminantium (strain
Welgevonden) GN=dnaJ PE=3 SV=1
Length = 382
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Query: 14 ASEASIKKAYRKQSLILHPDKETGDEKA---FMKLTKAYQALTDEESRRNFEKYGN---P 67
A+ IKKAYRK +L HPDK GD+ A F +L++AY L D++ R +++YG+
Sbjct: 16 ATPEEIKKAYRKMALKYHPDKNPGDKAAEEKFKELSEAYDVLIDKDKRAAYDRYGHSAFS 75
Query: 68 DGPGAMSF 75
DG G F
Sbjct: 76 DGSGRGGF 83
>sp|B0KIS4|DNAJ_PSEPG Chaperone protein DnaJ OS=Pseudomonas putida (strain GB-1)
GN=dnaJ PE=3 SV=1
Length = 374
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 13 GASEASIKKAYRKQSLILHPDKETGD---EKAFMKLTKAYQALTDEESRRNFEKYGN 66
GASEA +KKAYR+ ++ HPD+ GD E F + +AY+ L+D R F++YG+
Sbjct: 15 GASEADLKKAYRRLAMKYHPDRNPGDKESEDKFKEANEAYEVLSDASKRAAFDQYGH 71
>sp|B1J255|DNAJ_PSEPW Chaperone protein DnaJ OS=Pseudomonas putida (strain W619)
GN=dnaJ PE=3 SV=1
Length = 374
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 13 GASEASIKKAYRKQSLILHPDKETGD---EKAFMKLTKAYQALTDEESRRNFEKYGN 66
GASEA +KKAYR+ ++ HPD+ GD E F + +AY+ L+D R F++YG+
Sbjct: 15 GASEADLKKAYRRLAMKYHPDRNPGDKESEDKFKEANEAYEVLSDASKRAAFDQYGH 71
>sp|Q2GLU9|DNAJ_ANAPZ Chaperone protein DnaJ OS=Anaplasma phagocytophilum (strain HZ)
GN=dnaJ PE=3 SV=1
Length = 382
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 3/57 (5%)
Query: 13 GASEASIKKAYRKQSLILHPDKETGDEKA---FMKLTKAYQALTDEESRRNFEKYGN 66
GASE IKK+YRK+ HPD+ G+++A F K+++AY LTD + R +++YG+
Sbjct: 15 GASEEEIKKSYRKKVFEYHPDRNPGNKEAEEKFKKISEAYDVLTDSDKRAAYDRYGH 71
>sp|O74752|MAS5_SCHPO Mitochondrial protein import protein mas5 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mas5 PE=3 SV=1
Length = 407
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 14 ASEASIKKAYRKQSLILHPDKETGDEKAFMKLTKAYQALTDEESRRNFEKYG 65
AS+A +KKAYRK +L HPDK F ++++AY+ L DEE R ++++G
Sbjct: 17 ASQAELKKAYRKLALKYHPDKNPNAGDKFKEISRAYEILADEEKRATYDRFG 68
>sp|Q3ZBA6|DJB11_BOVIN DnaJ homolog subfamily B member 11 OS=Bos taurus GN=DNAJB11 PE=2
SV=1
Length = 358
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 11 PSGASEASIKKAYRKQSLILHPDKETGDEKA---FMKLTKAYQALTDEESRRNFEKYG 65
P AS IKKAYRK +L LHPD+ D +A F L AY+ L+D E R+ ++ YG
Sbjct: 33 PRSASIKDIKKAYRKLALQLHPDRNPDDPRAQEKFQDLGAAYEVLSDSEKRKQYDTYG 90
>sp|O89114|DNJB5_MOUSE DnaJ homolog subfamily B member 5 OS=Mus musculus GN=Dnajb5 PE=2
SV=1
Length = 348
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 11 PSGASEASIKKAYRKQSLILHPD--KETGDEKAFMKLTKAYQALTDEESRRNFEKYG 65
PSGA+E IKKAYRK +L HPD KE E+ F ++ +AY L+D + R +++YG
Sbjct: 12 PSGANEDEIKKAYRKMALKYHPDKNKEPNAEEKFKEIAEAYDVLSDPKKRSLYDQYG 68
>sp|A6VCL7|DNAJ_PSEA7 Chaperone protein DnaJ OS=Pseudomonas aeruginosa (strain PA7)
GN=dnaJ PE=3 SV=1
Length = 377
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 39/57 (68%), Gaps = 3/57 (5%)
Query: 13 GASEASIKKAYRKQSLILHPDKETGDEKA---FMKLTKAYQALTDEESRRNFEKYGN 66
GASEA +KKAYR+ ++ HPD+ GD++A F + +AY+ L+D R +++YG+
Sbjct: 15 GASEADLKKAYRRLAMKYHPDRNPGDKEAEDKFKEANEAYEVLSDASKRAAYDQYGH 71
>sp|P81999|DJB11_CANFA DnaJ homolog subfamily B member 11 OS=Canis familiaris GN=DNAJB11
PE=1 SV=2
Length = 358
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 11 PSGASEASIKKAYRKQSLILHPDKETGDEKA---FMKLTKAYQALTDEESRRNFEKYG 65
P AS IKKAYRK +L LHPD+ D +A F L AY+ L+D E R+ ++ YG
Sbjct: 33 PRSASIKDIKKAYRKLALQLHPDRNPDDPRAQEKFQDLGAAYEVLSDSEKRKQYDTYG 90
>sp|Q9HV44|DNAJ_PSEAE Chaperone protein DnaJ OS=Pseudomonas aeruginosa (strain ATCC
15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=dnaJ PE=3
SV=1
Length = 377
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 39/57 (68%), Gaps = 3/57 (5%)
Query: 13 GASEASIKKAYRKQSLILHPDKETGDEKA---FMKLTKAYQALTDEESRRNFEKYGN 66
GASEA +KKAYR+ ++ HPD+ GD++A F + +AY+ L+D R +++YG+
Sbjct: 15 GASEADLKKAYRRLAMKYHPDRNPGDKEAEDKFKEANEAYEVLSDASKRAAYDQYGH 71
>sp|Q02FR2|DNAJ_PSEAB Chaperone protein DnaJ OS=Pseudomonas aeruginosa (strain
UCBPP-PA14) GN=dnaJ PE=3 SV=1
Length = 377
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 39/57 (68%), Gaps = 3/57 (5%)
Query: 13 GASEASIKKAYRKQSLILHPDKETGDEKA---FMKLTKAYQALTDEESRRNFEKYGN 66
GASEA +KKAYR+ ++ HPD+ GD++A F + +AY+ L+D R +++YG+
Sbjct: 15 GASEADLKKAYRRLAMKYHPDRNPGDKEAEDKFKEANEAYEVLSDASKRAAYDQYGH 71
>sp|B7V1H2|DNAJ_PSEA8 Chaperone protein DnaJ OS=Pseudomonas aeruginosa (strain LESB58)
GN=dnaJ PE=3 SV=1
Length = 377
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 39/57 (68%), Gaps = 3/57 (5%)
Query: 13 GASEASIKKAYRKQSLILHPDKETGDEKA---FMKLTKAYQALTDEESRRNFEKYGN 66
GASEA +KKAYR+ ++ HPD+ GD++A F + +AY+ L+D R +++YG+
Sbjct: 15 GASEADLKKAYRRLAMKYHPDRNPGDKEAEDKFKEANEAYEVLSDASKRAAYDQYGH 71
>sp|O75953|DNJB5_HUMAN DnaJ homolog subfamily B member 5 OS=Homo sapiens GN=DNAJB5 PE=1
SV=1
Length = 348
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 11 PSGASEASIKKAYRKQSLILHPD--KETGDEKAFMKLTKAYQALTDEESRRNFEKYG 65
PSGA+E IKKAYRK +L HPD KE E+ F ++ +AY L+D + R +++YG
Sbjct: 12 PSGANEDEIKKAYRKMALKYHPDKNKEPNAEEKFKEIAEAYDVLSDPKKRGLYDQYG 68
>sp|Q5RAJ6|DJB11_PONAB DnaJ homolog subfamily B member 11 OS=Pongo abelii GN=DNAJB11
PE=2 SV=1
Length = 358
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 11 PSGASEASIKKAYRKQSLILHPDKETGDEKA---FMKLTKAYQALTDEESRRNFEKYG 65
P AS IKKAYRK +L LHPD+ D +A F L AY+ L+D E R+ ++ YG
Sbjct: 33 PRSASIKDIKKAYRKLALQLHPDRNPDDPQAQEKFQDLGAAYEVLSDSEKRKQYDTYG 90
>sp|Q99KV1|DJB11_MOUSE DnaJ homolog subfamily B member 11 OS=Mus musculus GN=Dnajb11
PE=1 SV=1
Length = 358
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 11 PSGASEASIKKAYRKQSLILHPDKETGDEKA---FMKLTKAYQALTDEESRRNFEKYG 65
P AS IKKAYRK +L LHPD+ D +A F L AY+ L+D E R+ ++ YG
Sbjct: 33 PRSASIKDIKKAYRKLALQLHPDRNPDDPQAQEKFQDLGAAYEVLSDSEKRKQYDTYG 90
>sp|Q9UBS4|DJB11_HUMAN DnaJ homolog subfamily B member 11 OS=Homo sapiens GN=DNAJB11
PE=1 SV=1
Length = 358
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 11 PSGASEASIKKAYRKQSLILHPDKETGDEKA---FMKLTKAYQALTDEESRRNFEKYG 65
P AS IKKAYRK +L LHPD+ D +A F L AY+ L+D E R+ ++ YG
Sbjct: 33 PRSASIKDIKKAYRKLALQLHPDRNPDDPQAQEKFQDLGAAYEVLSDSEKRKQYDTYG 90
>sp|Q5BIP8|DNJB5_BOVIN DnaJ homolog subfamily B member 5 OS=Bos taurus GN=DNAJB5 PE=2
SV=1
Length = 348
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 11 PSGASEASIKKAYRKQSLILHPD--KETGDEKAFMKLTKAYQALTDEESRRNFEKYG 65
PSGA+E IKKAYRK +L HPD KE E+ F ++ +AY L+D + R +++YG
Sbjct: 12 PSGANEDEIKKAYRKMALKYHPDKNKEPNAEEKFKEIAEAYDVLSDPKKRGLYDQYG 68
>sp|Q6TUG0|DJB11_RAT DnaJ homolog subfamily B member 11 OS=Rattus norvegicus
GN=Dnajb11 PE=2 SV=1
Length = 358
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 11 PSGASEASIKKAYRKQSLILHPDKETGDEKA---FMKLTKAYQALTDEESRRNFEKYG 65
P AS IKKAYRK +L LHPD+ D +A F L AY+ L+D E R+ ++ YG
Sbjct: 33 PRSASIKDIKKAYRKLALQLHPDRNPDDPQAQEKFQDLGAAYEVLSDSEKRKQYDTYG 90
>sp|B2GBQ6|DNAJ_LACF3 Chaperone protein DnaJ OS=Lactobacillus fermentum (strain NBRC
3956 / LMG 18251) GN=dnaJ PE=3 SV=1
Length = 386
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Query: 14 ASEASIKKAYRKQSLILHPD--KETGDEKAFMKLTKAYQALTDEESRRNFEKYG 65
ASEA IK+AYRK + HPD E G EK F K+ +AY+ L+D++ R ++++G
Sbjct: 16 ASEAEIKRAYRKLAAKYHPDVNHEPGAEKKFKKINEAYETLSDDQKRAQYDQFG 69
>sp|P50027|DNAJH_SYNY3 DnAJ-like protein slr0093 OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=slr0093 PE=4 SV=1
Length = 332
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 39/55 (70%), Gaps = 3/55 (5%)
Query: 14 ASEASIKKAYRKQSLILHPDKETGDEKA---FMKLTKAYQALTDEESRRNFEKYG 65
ASEA IKK +RK +L HPDK GD+ A F ++++AY+ L+D E R+ ++++G
Sbjct: 19 ASEAEIKKQFRKLALKYHPDKNPGDKAAEEKFKEISEAYEVLSDPEKRQKYDQFG 73
>sp|Q2VYT0|DNAJ_MAGSA Chaperone protein DnaJ OS=Magnetospirillum magneticum (strain
AMB-1 / ATCC 700264) GN=dnaJ PE=3 SV=1
Length = 383
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Query: 13 GASEASIKKAYRKQSLILHPDKETGD---EKAFMKLTKAYQALTDEESRRNFEKYGN 66
GAS IKKAYRKQ++ HPD+ G+ E+ F ++ +AY L DE+ R ++++G+
Sbjct: 15 GASPDDIKKAYRKQAMQFHPDRNPGNADAEQKFKEINEAYDVLKDEQKRAAYDRFGH 71
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.132 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 347,705,073
Number of Sequences: 539616
Number of extensions: 16127769
Number of successful extensions: 130757
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1119
Number of HSP's successfully gapped in prelim test: 2281
Number of HSP's that attempted gapping in prelim test: 92263
Number of HSP's gapped (non-prelim): 25238
length of query: 904
length of database: 191,569,459
effective HSP length: 127
effective length of query: 777
effective length of database: 123,038,227
effective search space: 95600702379
effective search space used: 95600702379
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 66 (30.0 bits)